Sequence Modifications Mass Mass Fractional Part Protein Groups Proteins Gene Names Protein Names Unique (Groups) Unique (Proteins) Acetyl (Protein N-term) Deamidation (N) Oxidation (M) Missed cleavages Fraction Average Fraction Std. Dev. Fraction 1 Fraction 2 Fraction 3 Fraction 4 Fraction 5 Fraction 6 Fraction 7 Fraction 8 Fraction 9 Fraction 10 Fraction 11 Fraction 12 Fraction 13 Retention time Calibrated retention time Charges PEP MS/MS scan number Raw file Score Delta score Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity 1 Reporter intensity 2 Reporter intensity 3 Reporter intensity 4 Reporter intensity 5 Reporter intensity 6 Reporter intensity count 1 Reporter intensity count 2 Reporter intensity count 3 Reporter intensity count 4 Reporter intensity count 5 Reporter intensity count 6 Intensity Reverse Potential contaminant id Protein group IDs Peptide ID Evidence IDs MS/MS IDs Best MS/MS Deamidation (N) site IDs Oxidation (M) site IDs MS/MS Count AAAAAAGPEMVR Acetyl (Protein N-term) 1155.5706 0.57064232 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 1 0 0 0 2 0.816 1 1 1 51.135 51.135 2 8.0186E-49 16769 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 123.6 83.933 69.653 7.4035 29.701 0 58.576 20.254 65 9 28 0 56 19 2 1 2 0 2 1 96906 0 1769 0 0;1;2 0;1;2 1 3 AAAAAASHLNLDALR Acetyl (Protein N-term) 1505.795 0.79503961 2546 Q8CH72;A2AGS0;A2AGS1 Trim32 E3 ubiquitin-protein ligase TRIM32 yes no 1 0 0 0 5 0 1 66.802 66.802 2 0.00023787 23850 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.641 32.265 0 48.507 26.115 28.521 27.978 0 0 46 28 28 28 0 0 1 1 1 1 0 3049.1 1 2546 1 3 3 3 1 AAAAAEQQQFYLLLGNLLSPDNVVR Acetyl (Protein N-term) 2742.4341 0.43407907 2422 Q8BKC5 Ipo5 Importin-5 yes yes 1 0 0 0 10 3 1 1 120.16 120.16 3 3.8025E-25 45351 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.945 36.347 0 0 0 5.465 0 3.198 0 0 0 5 0 3 0 0 0 2 0 2 2921.5 2 2422 2 4;5 4;5 5 2 AAAAATAAAAAAPSGGGGGGEEERLEEK Acetyl (Protein N-term) 2511.1837 0.18373762 790 D3Z7U4 Mecp2 yes yes 1 0 0 1 2 0 1 59.11 59.11 3 4.7934E-31 20310 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.475 31.194 0 0 0 40.115 17.353 19.759 0 0 0 37 19 19 0 0 0 1 1 1 2153.3 3 790 3 6 6 6 1 AAAAGALAPGPLPDLAAR Unmodified 1601.8889 0.88893999 1938 Q3TW96 Uap1l1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes yes 0 0 0 0 7 0 1 68.171 68.171 3 0.0008459 23084 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.314 22.195 20.101 0 47.997 37.58 0 39.442 19 0 46 37 0 37 1 0 1 1 0 1 2340.7 4 1938 5 7 7 7 1 AAAAKEEAPK Unmodified 984.52401 0.52400971 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 5 0 1 36.777 36.777 3 0.020519 9535 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.202 21.51 39.414 56.926 0 90.719 0 108.73 37 56 0 83 0 102 1 1 0 1 0 1 6905.9 5 2769 6 8 8 8 1 AAAASAAEAGIATPGTEDSDDALLK Unmodified 2315.1129 0.11286409 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 0 3.5 0.5 1 1 67.275 67.275 4 2.435E-05 24146 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.029 35.26 49.358 29.792 0 0 58.576 59.696 46 28 0 0 56 56 1 1 0 0 1 1 5360.8 6 1183 7 9;10 9;10 10 2 AAAATGLR Acetyl (Protein N-term) 771.4239 0.42390173 2949 Q9CQZ5;A0A2R8VI90 Ndufa6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 1 0 0 0 2 0.816 1 1 1 40.094 40.094 2 6.3517E-07 11874 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.04 21.666 0 19 37.435 58.337 34.005 58.726 0 19 37 56 37 56 0 1 1 1 1 1 50245 7 2949 8 11;12;13 11;12;13 12 3 AAAAVVEFQR Acetyl (Protein N-term) 1102.5771 0.57710791 2369 Q8BG32;G3UYI4;G3UYL3 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 1 0 0 0 2.5 0.5 1 1 64.855 64.855 2 2.4578E-11 23439 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.308 61.857 0 9.4227 9.1727 0 9.414 0 0 9 9 0 9 0 0 1 1 0 1 0 11873 8 2369 9 14;15 14;15 15 2 AAADDGEEPK Unmodified 1001.4302 0.4301689 1473 P28352;D3Z124;D3Z6R9;F6QA74 Apex1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 0 2 0 1 34.763 34.763 2 0.0049274 9372 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.827 34.228 20.218 0 28.468 38.744 0 0 19 0 28 37 0 0 1 0 1 1 0 0 1265.6 9 1473 10 16 16 16 1 AAADGDDSLYPIAVLIDELR Acetyl (Protein N-term) 2158.0794 0.079379118 2272 Q76MZ3;G3UXQ1 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 1 0 0 0 5.83 3.34 1 2 1 1 1 121.65 121.65 3 7.3998E-11 35567 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.43 46.492 5.365 6.384 3.2029 2.0596 14.466 6.1858 5 6 3 2 14 6 1 2 2 2 3 2 18596 10 2272 11 17;18;19;20;21;22 17;18;19;20;21;22;23;24 17 8 AAADLMAYCEAHAK Unmodified 1520.6752 0.67518375 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 0 0 0 0 10 3 1 1 56.172 56.172 3 0.0082167 17640 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.132 30.168 128.16 293.45 196.23 295.55 342.96 369.71 120 287 195 287 353 356 1 2 1 2 2 2 17203 11 1777 12 23;24 25;26 25 2 AAAEDVNVTFEDQQK Unmodified 1663.7689 0.76894402 920 E9Q6U4;Q3UWL8 Pfdn4 Prefoldin subunit 4 yes no 0 0 0 0 4 0 1 56.823 56.823 3 1.622E-16 19533 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.2 77.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 920 13 25 27 27 1 AAAELLQSQGSQAGGSQTLK Unmodified 1943.9912 0.99123281 3317 Q9R1T4 Sept6 Septin-6 yes yes 0 0 0 0 7 0 1 59.225 59.225 3 6.9074E-12 18889 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106 85.058 39.295 36.089 37.671 0 57.278 37.808 37 37 37 0 56 37 1 1 1 0 1 1 5031.3 13 3317 14 26 28 28 1 AAAETVVPR Unmodified 912.50288 0.50288033 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 4.5 0.5 1 1 39.697 39.697 2 0.0009422 10955 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.12 56.768 0 48.359 35.023 47.364 43.933 58.442 0 46 37 46 46 56 0 1 1 1 1 1 7345.3 14 3193 15 27;28 29;30 30 2 AAAEVNQEYGLDPK Unmodified 1503.7205 0.72053726 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 5.33 3.5 2 2 1 1 55.112 55.112 2;3;4 1.1981E-16 18441 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.13 78.165 396.27 257.46 86.908 188.74 443.28 209.45 371 259 83 177 436 204 6 4 1 3 5 3 60183 15 1857 16 29;30;31;32;33;34 31;32;33;34;35;36;37 36 7 AAAFEQLQK Unmodified 1004.5291 0.52909508 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 8 1 1 1 56.463 56.463 2 0.0010534 17524 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.6 57.503 88.74 63.176 0 119.84 78.681 76.639 83 65 0 111 83 74 1 1 0 1 1 1 7995.2 16 3012 17 35;36 38;39 38 2 AAAGAAATDLEVVR Acetyl (Protein N-term) 1355.7045 0.70449327 2236 Q6PD26 Pigs GPI transamidase component PIG-S yes yes 1 0 0 0 1 0 1 64.544 64.544 2 0.0018992 21724 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.164 24.801 0 19.729 29.112 0 0 20.254 0 19 28 0 0 19 0 1 1 0 0 1 885.31 17 2236 18 37 40 40 1 AAAGELQEDSGLHVLAR Unmodified 1735.8853 0.88531118 2510 Q8C845 Efhd2 yes yes 0 0 0 0 4 0 1 54.257 54.257 3 3.8852E-06 18310 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.252 54.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 2510 19 38 41 41 1 AAAHGQWEQQR Unmodified 1280.601 0.60103125 1978 Q3UHB8 Ccdc177 Coiled-coil domain-containing protein 177 yes yes 0 0 0 0 5 0 1 28.23 28.23 3 0.061897 5625 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.664 20.287 0 48.16 46.882 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 1517.6 19 1978 20 39 42 42 1 AAAHHYGAQCDK Unmodified 1327.5728 0.57276759 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 0 9.5 3.5 1 1 26.465 26.465 3 0.0020595 4642 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.551 46.179 18.539 0 19.881 14.117 0 0 18 0 19 14 0 0 2 0 1 1 0 0 1784.6 20 3145 21 40;41 43;44 44 2 AAAHVQGLVQVASR Unmodified 1405.779 0.77899561 3017 Q9D061 Acbd6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 0 0 1 0 1 45.918 45.918 3 0.0048222 13509 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.527 22.484 0 9.2416 20.004 0 29.288 0 0 9 19 0 28 0 0 1 1 0 1 0 1307.1 21 3017 22 42 45 45 1 AAALSLSTLASPK Unmodified 1228.7027 0.70270235 1612 P52795 Efnb1 Ephrin-B1 yes yes 0 0 0 0 11 0 1 67.702 67.702 3 0.0024044 19005 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.951 37.165 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 1612 23 43 46 46 1 AAAMDVDTPSGTNSGAGK Acetyl (Protein N-term);Deamidation (N) 1691.7308 0.73084395 401 A0A2R8W6R3;P62878 Rbx1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes no 1 1 0 0 2 0 1 56.863 56.863 3 3.0613E-05 19304 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.621 34.06 0 39.368 0 0 36.358 68.253 0 37 0 0 37 65 0 1 0 0 1 1 3465.1 23 401 24 44 47 47 105 1 AAAMDVDTPSGTNSGAGK Acetyl (Protein N-term) 1690.7468 0.74682837 401 A0A2R8W6R3;P62878 Rbx1 E3 ubiquitin-protein ligase RBX1;E3 ubiquitin-protein ligase RBX1, N-terminally processed yes no 1 0 0 0 3 0 1 55.139 55.139 3 0.00051987 19118 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.844 21.521 29.904 27.776 0 0 47.137 28.503 28 28 0 0 46 28 1 1 0 0 1 1 5004.5 24 401 24 45 48 48 1 AAANEQLTR Unmodified 972.49886 0.49885759 742 D3Z0L4;Q9D9P1;Q9CRB9 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 6.25 3.96 1 1 1 1 31.867 31.867 2 2.4554E-07 7734 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.94 55.907 129.17 58.646 61.334 27.678 141.14 86.892 121 60 60 28 139 83 3 2 2 1 3 1 17470 25 742 25 46;47;48;49 49;50;51;52 50 4 AAAPADVGEER Unmodified 1084.5149 0.51490158 2609 Q8K3A9 Mepce 7SK snRNA methylphosphate capping enzyme yes yes 0 0 0 0 1 0 1 35.169 35.169 2 0.0033916 9123 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.349 42.95 9.51 29.151 0 20.767 0 39.442 9 28 0 19 0 37 1 1 0 1 0 1 1361.1 26 2609 26 50 53 53 1 AAAPAPEEEMDECEQALAAEPK Unmodified 2356.0199 0.019891683 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 2 0 2 64.839 64.839 3;4 1.7849E-09 23074 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.69 49.529 29.843 39.794 68.341 44.641 111.46 85.298 28 38 65 46 111 83 2 1 1 1 2 3 8881 27 3094 27 51;52 54;55;56 56 3 AAAQLLQSQAQQSGAQQTK Unmodified 1956.0025 0.0024662011 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept11 Septin-11 yes no 0 0 0 0 8.67 0.471 1 2 53.145 53.145 3;4 1.3324E-63 15352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 185.71 165.95 72.837 111.4 141.93 31.717 41.161 68.115 69 111 139 32 42 65 2 2 3 1 1 2 32562 28 112 28 53;54;55 57;58;59 57 3 AAAQTLER Unmodified 858.45593 0.45593014 1440 Q543K9;P23492 Pnp Purine nucleoside phosphorylase yes no 0 0 0 0 4 0 1 32.86 32.86 2 0.0067714 8162 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.22 43.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 1440 29 56 60 60 1 AAAQVLNTLWQYR Unmodified 1532.81 0.80996139 512 A2AS47;A2AS45;Q68FH0 Pkp4 Plakophilin-4 yes no 0 0 0 0 1 0 1 82.606 82.606 2 0.00055304 28982 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.143 49.045 0 0 9.738 0 0 9.594 0 0 9 0 0 9 0 0 1 0 0 1 1109.2 30 512 30 57 61 61 1 AAASTDYYK Unmodified 988.45018 0.45017606 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 43.585 43.585 2 9.1633E-06 12937 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.47 102.43 275.99 278.68 351.82 257.73 318.08 212.72 259 278 352 259 316 204 3 3 3 3 3 3 74890 31 1520 31 58;59;60;61 62;63;64;65 65 4 AAASTDYYKR Unmodified 1144.5513 0.55128709 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 10 3 1 1 36.625 36.625 3 0.00029524 9649 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.642 56.838 167.81 173.57 142.4 169.73 229.35 160.82 158 176 149 167 232 157 2 2 2 2 2 2 13979 32 1520 32 62;63 66;67 67 2 AAATAANTGPR Unmodified 999.50976 0.50975662 2312 Q80U49;B9EIX2 Cep170b Centrosomal protein of 170 kDa protein B yes no 0 0 0 0 6 0 1 27.36 27.36 2 0.004141 4908 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.299 37.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 2312 33 64 68 68 1 AAATLSFGPER Acetyl (Protein N-term) 1160.5826 0.58258722 2305 Q80TM9 Nisch Nischarin yes yes 1 0 0 0 4 0 1 65.045 65.045 2 0.0030504 23083 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.327 35.292 0 29.792 0 20.234 28.359 0 0 28 0 19 28 0 0 1 0 1 1 0 3003.3 34 2305 34 65 69 69 1 AAATPEPAVAQPDSTALEGATGQAPPSSK Unmodified 2719.3301 0.33006751 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 6 4.06 1 2 1 58.408 58.408 3;4 3.363E-08 20220 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.413 45.293 187.41 152.54 112.12 70.997 158.74 173.49 176 157 111 66 158 167 4 4 3 3 3 4 31514 35 1986 35 66;67;68;69 70;71;72;73;74 74 5 AAATTSQPVLTSQQIETIFFK Unmodified 2280.2002 0.20016296 2230 Q6PAJ1 Bcr Breakpoint cluster region protein yes yes 0 0 0 0 8 0 1 86.862 86.862 3 0.0022898 31337 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.615 24.736 20.387 0 0 9.837 0 20.254 19 0 0 9 0 19 1 0 0 1 0 1 997.7 36 2230 36 70 75 75 1 AAAVGTANK Unmodified 801.43447 0.43446642 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 7 0 1 35.759 35.759 2 0.01488 7922 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.628 42.666 20.387 0 0 9.837 0 29.848 19 0 0 9 0 28 1 0 0 1 0 1 1377.4 37 2182 38 71 76 76 1 AAAVPVEFK Unmodified 930.51747 0.51746776 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 59.256 59.256 2 0.00082159 18943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.89 61.728 691.86 693.52 531.55 584.97 628.8 606.73 651 704 548 575 638 586 4 4 3 4 3 4 122280 38 2734 39 72;73;74;75 77;78;79;80 78 4 AAAVSGVVR Acetyl (Protein N-term) 870.49232 0.49231565 2446 Q8BR90 UPF0600 protein C5orf51 homolog yes yes 1 0 0 0 3.5 0.5 1 1 50.438 50.438 2 0.017683 16466 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.68 33.324 0 29.315 48.246 19.058 28.413 0 0 28 47 19 28 0 0 1 2 1 1 0 4156.2 39 2446 40 76;77 81;82 82 2 AAAVTLK Unmodified 672.41703 0.41702544 2423 Q8BKZ9 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 47.65 47.65 2 0.019793 11882 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.43 40.395 294.11 173.92 726.99 512.29 560.97 706.74 277 188 704 518 582 678 1 1 2 2 2 2 127520 40 2423 41 78;79 83;84 84 2 AACEQLHQQQQQQQEETTAATLLLQGEEEGEED Unmodified 3768.6657 0.6656841 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 2 0.816 1 1 1 71.433 71.433 4 5.1311E-53 24072 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.05 116.51 34.111 21.849 55.041 0 52.048 22.274 32 23 52 0 50 21 2 2 3 0 2 2 31023 41 1542 42 80;81;82 85;86;87;88 85 4 AACLCFR Unmodified 896.39968 0.39967759 1132;1337;2651 I1E4X7;Q9JI46;H3BLR8;A0A338P7L3;P0C028;P0C027;Q8R2U6 Nudt3;Nudt11;Nudt10;Nudt4 Diphosphoinositol polyphosphate phosphohydrolase 1;Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha;Diphosphoinositol polyphosphate phosphohydrolase 2 no no 0 0 0 0 9 0 1 49.148 49.148 2 0.027102 12685 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.939 67.897 0 86.985 79.393 116.59 0 108.73 0 83 83 111 0 102 0 1 1 1 0 1 7452.2 42 1132;1337;2651 43 83 89 89 1 AADAAAEPYPEDK Unmodified 1346.599 0.59902514 2689 Q8VCX5;E9Q9E0 Micu1 Calcium uptake protein 1, mitochondrial yes no 0 0 0 0 3 0 1 46.408 46.408 2 1.1222E-14 15001 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.47 63.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 2689 44 84 90 90 1 AADAEAEVASLNR Unmodified 1315.6368 0.63680763 209 P21107;A0A0R4J1P2 Tpm3 Tropomyosin alpha-3 chain no no 0 0 0 0 3 0 1 47.536 47.536 3 0.00016131 15641 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.622 1.7914 39.701 0 0 20.767 0 29.848 37 0 0 19 0 28 1 0 0 1 0 1 58137 44 209 45 85 91 91 1 AADAVEDLR Unmodified 958.47197 0.47197413 3350 Q9WVE8;A0A2R8W6S4;A0A338P6P7 Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 0 2.5 0.5 1 1 47.042 47.042 2 0.00031867 15188 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.36 34.987 38.989 75.173 129.03 155.4 181.13 152.6 37 74 130 148 185 148 1 1 2 1 2 2 32961 45 3350 46 86;87 92;93 93 2 AADAVGEILLSLSYLPTAER Unmodified 2088.1103 0.11028532 2791 Q920N7 Syt12 Synaptotagmin-12 yes yes 0 0 0 0 8.5 0.5 1 1 106.01 106.01 3 1.1017E-07 37044 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.763 51.661 0 0 20.173 17.635 0 0 0 0 19 18 0 0 0 0 1 2 0 0 3142 46 2791 47 88;89 94;95 95 2 AADELEAFLGGGAPGSR Unmodified 1616.7794 0.77944912 2070 Q5U3K5 Rabl6 Rab-like protein 6 yes yes 0 0 0 0 5 0 1 79.501 79.501 3 0.0010862 29918 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.883 25.648 0 0 0 20.614 8.1456 9.3616 0 0 0 19 9 9 0 0 0 1 1 1 1865.1 47 2070 48 90 96 96 1 AADESER Unmodified 776.33006 0.33006092 782;926;757;905;1106;1107;1656;209;906;471;2196 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;Q6IRU2;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm4;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 0 13 0 1 18.968 18.968 2 0.011135 2864 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.62 49.708 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 753.03 + 48 905;906;1106;1107;1656;209;757;782;926;2196;471 49 91 97 97 1 AADEVAEGK Unmodified 888.41888 0.41887593 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 39.821 39.821 2 0.00050365 11110 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.23 73.352 428.4 277.08 366.49 365.43 387.91 368.44 402 287 367 361 399 354 3 3 3 4 4 3 95755 49 1857 50 92;93;94;95;96 98;99;100;101;102 102 5 AADFEDLLSSQGFNAHK Unmodified 1848.8642 0.86424139 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 6 0 1 73.579 73.579 4 0.015552 26560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.193 15.812 9.3549 38.433 18.205 0 28.291 29.041 9 37 19 0 28 28 1 1 1 0 1 1 3507 50 2306 51 97 103 103 1 AADGPGDR Unmodified 757.33548 0.33548065 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 13 0 1 21.194 21.194 2 0.015932 3106 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 48.92 0 0 12.984 0 0 20.254 0 0 12 0 0 19 0 0 1 0 0 1 589.68 51 416 52 98 104 104 1 AADGTTVVPPEEEEEEEGGK Unmodified 2071.907 0.90695364 1030 F8VPU2 Farp1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes yes 0 0 0 0 1 0 2 51.469 51.469 3;4 2.1419E-08 15585 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.11 62.829 0 38.641 107.15 44.45 28.466 39.442 0 38 103 47 28 37 0 2 2 2 1 1 4676.2 52 1030 53 99;100 105;106;107 105 3 AADIDQEVK Unmodified 987.48729 0.48728985 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 47.647 47.647 2 7.0476E-06 15597 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 154.56 91.069 0 235.6 99.977 203.8 179.4 0 0 223 102 195 176 0 0 2 1 2 1 0 23497 53 2264 54 101;102 108;109 108 2 AADIDQEVKER Unmodified 1272.631 0.63099397 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 3 0 1 43.467 43.467 3 0.0037425 13572 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.232 22.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 2264 55 103 110 110 1 AADISQWAGPLCLQEVDEPPQHALR Acetyl (Protein N-term) 2842.3708 0.37082689 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 1 0 0 0 5.67 3.35 1 2 2 1 83.731 83.731 3;4 4.5564E-42 31775 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.94 86.835 58.368 56.848 30.843 43.055 31.727 8.1208 56 56 33 41 31 8 4 5 3 4 5 2 198650 55 1806 56 104;105;106;107;108;109 111;112;113;114;115;116;117;118 115 8 AADKDTCFSTEGPNLVTR Unmodified 1980.9211 0.92110434 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 7.75 3.11 1 1 1 1 53.125 53.125 3 1.0808E-25 17557 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.18 119.59 215 415.63 429.02 132.23 337.26 287.53 204 411 426 135 334 278 3 4 4 3 3 3 68319 56 1321 57 110;111;112;113 119;120;121;122 122 4 AADLEDTTEEETAK Unmodified 1521.6682 0.66822692 196 A0A0R4J124;O54781 Srpk2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 0 0 0 0 1 0 1 51.205 51.205 3 0.00025258 15515 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.83 49.09 0 0 0 20.081 36.461 38.402 0 0 0 19 37 37 0 0 0 1 1 1 1517.4 57 196 58 114 123 123 1 AADLGQIPDVDIDSDGVFK Acetyl (Protein N-term) 2015.9688 0.96876604 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 1 0 0 0 3 0.816 1 1 1 92.42 92.42 3 1.7588E-08 34054 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.203 35.174 27.659 50.933 24.025 54.511 68.217 42.296 26 50 24 52 69 41 3 4 2 2 4 2 21212 58 3101 59 115;116;117 124;125;126;127 127 4 AADLLYAMCDR Unmodified 1297.5795 0.57949245 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 7 0 1 70.785 70.785 2 0.0026175 24253 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.556 50.388 39.462 47.347 0 48.864 75.159 0 37 47 0 46 74 0 1 1 0 1 1 0 5885.9 59 1400 60 118 128 128 1 AADSQNSGEGNTSAAESSFSQEVAR Unmodified 2499.0746 0.074581104 1009 F6ZDS4;Q7M739 Tpr Nucleoprotein TPR yes no 0 0 0 0 2 0 1 48.698 48.698 3 0.00040565 15580 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.454 28.999 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2089.5 60 1009 62 119 129 129 1 AADVASFVK Unmodified 906.48108 0.48108226 1804 P70236 Map2k6 Dual specificity mitogen-activated protein kinase kinase 6 yes yes 0 0 0 0 7 0 1 60.324 60.324 2 0.004573 19441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.465 30.747 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 1804 63 120 130 130 1 AADVHEVR Unmodified 895.45118 0.45117911 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 5.5 4.39 1 1 1 1 26.583 26.583 3 5.7365E-11 5332 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.75 96.057 1046.2 680.28 967.21 903.68 768.83 811.01 982 687 964 885 771 769 6 6 5 7 5 5 385930 62 1609 64 121;122;123;124 131;132;133;134;135;136;137;138 136 8 AADVHEVRK Unmodified 1023.5461 0.54614213 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 5 0 1 31.325 31.325 4 0.0051889 6974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.563 33.465 139.18 62.452 0 169.52 110.63 49.036 130 65 0 157 111 46 2 1 0 2 1 1 5442.5 63 1609 65 125 139;140 140 2 AADVNMTDEEGR Unmodified 1306.5459 0.54594371 3017 Q9D061 Acbd6 Acyl-CoA-binding domain-containing protein 6 yes yes 0 0 0 0 1 0 1 40.557 40.557 2 0.0005221 11399 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.479 54.736 29.832 7.0676 29.722 0 29.288 0 28 9 28 0 28 0 1 1 1 0 1 0 3174.2 64 3017 66 126 141 141 1 AAEAAGGK Acetyl (Protein N-term) 715.35007 0.35006808 1192 O35382;Q8C391;Q9CXE1 Exoc4 Exocyst complex component 4 yes no 1 0 0 0 2 0 1 36.054 36.054 2 0.014379 9907 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.504 38.036 0 39.368 0 49.618 35.103 38.44 0 37 0 46 37 37 0 1 0 1 1 1 6685.4 65 1192 67 127 142 142 1 AAEAGVTEEQYGYLGTSAK Unmodified 1943.9113 0.91125116 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4 0 1 59.04 59.04 3 1.0151E-07 20575 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.088 61.594 30.044 0 0 0 27.631 48.248 28 0 0 0 28 46 1 0 0 0 1 1 5741.6 66 1382 68 128 143 143 1 AAEDSNLISGFGVAEGSEK Unmodified 1879.88 0.87995103 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 4.67 0.471 1 2 69.253 69.253 3;4 1.258E-08 24947 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.568 66.72 109.15 29.792 49.573 91.812 38.702 99.138 102 28 46 84 37 93 3 1 1 2 1 2 22760 67 1983 69 129;130;131 144;145;146;147 146 4 AAEDYGVIK Unmodified 964.48656 0.48656157 1531 P37804;A0A1L1STN8 Tagln Transgelin yes no 0 0 0 0 5 0 1 52.741 52.741 2 0.0012975 17258 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.74 57.313 20.207 0 30.194 0 76.124 37.27 19 0 28 0 74 37 1 0 1 0 1 1 3036.2 68 1531 70 132 148 148 1 AAEEAFVNDIDESSPGTEWER Deamidation (N) 2352.003 0.0029792906 600 B1AWE0;Q6PFA2 Clta yes no 0 1 0 0 1 0 1 74.606 74.606 3 0.00031901 25613 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.808 38.402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 600 71 133 149 149 172 1 AAEEVEAK Unmodified 845.41306 0.41306227 742 D3Z0L4;Q9D9P1;Q9CRB9;F6QFL0 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 2 0 1 39.694 39.694 2 0.017341 11712 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.165 31.069 78.709 62.796 63.237 65.749 81.168 76.568 74 65 65 65 83 74 1 1 1 1 1 1 6962.3 70 742 72 134 150 150 1 AAEEVKR Unmodified 801.43447 0.43446642 1499 P31786;M0QWU8;Q4VWZ5 Dbi Acyl-CoA-binding protein yes no 0 0 0 1 13 0 1 28.846 28.846 3 0.026805 6128 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.854 37.721 0 478.56 587.47 401.07 872.93 695.71 0 459 586 414 875 676 0 1 1 1 1 1 50668 71 1499 73 135 151 151 1 AAEFHPGLTEGK Unmodified 1255.6197 0.619701 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 5 0 1 47.804 47.804 3 0.00022356 14923 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.085 53.649 49.011 0 58.315 45.563 65.897 0 46 0 56 46 65 0 1 0 1 1 1 0 4392.5 72 860 74 136 152 152 1 AAEGISSDSLLSVPGQK Unmodified 1657.8523 0.85227972 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6 0 1 66.573 66.573 3 1.0353E-39 23132 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 160.65 128.31 39.474 0 38.181 37.14 54.544 67.734 37 0 37 37 56 65 1 0 1 1 1 1 7993.8 73 570 75 137 153 153 1 AAEIDCQDIEER Unmodified 1447.6249 0.62492232 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 1 0 2 47.378 47.378 2;3 2.5718E-32 14120 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 182.92 148.03 0 37.953 84.65 64.637 72.456 57.628 0 37 83 65 74 56 0 2 2 2 2 2 17859 74 893 76 138;139 154;155 154 2 AAELEEELK Unmodified 1030.5183 0.51825563 1998 Q3UMT1;F6XWD4 Ppp1r12c Protein phosphatase 1 regulatory subunit 12C yes no 0 0 0 0 3 0 1 60.163 60.163 2 0.040992 21351 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.859 8.4406 29.87 0 29.298 19.021 0 0 28 0 28 19 0 0 1 0 1 1 0 0 1185.5 75 1998 77 140 156 156 1 AAELIANSLATAGDGLIELR Deamidation (N) 1998.0633 0.063335123 1788 P67778 Phb Prohibitin yes yes 0 1 0 0 5 0 1 84.607 84.607 3 3.1525E-10 32160 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.974 60.108 0 0 19.685 19.594 0 39.442 0 0 19 19 0 37 0 0 1 1 0 1 2612.4 76 1788 78 141 157 157 716 1 AAELIANSLATAGDGLIELR Unmodified 1997.0793 0.079319539 1788 P67778 Phb Prohibitin yes yes 0 0 0 0 8.5 2.22 1 1 2 1 1 95.815 95.815 3;4 2.3789E-11 34571 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.41 82.986 73.649 50.155 68.269 49.942 36.757 122.55 69 51 66 47 37 116 4 4 3 2 3 7 37899 77 1788 78 142;143;144;145;146;147 158;159;160;161;162;163;164;165 161 8 AAELQAQWER Unmodified 1200.5887 0.58873523 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 0 1 52.816 52.816 3 3.3564E-05 17271 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.283 68.732 29.856 37.355 0 49.072 64.115 47.206 28 37 0 46 65 46 1 1 0 1 1 1 4059.8 78 2186 79 148 166 166 1 AAESIDQK Unmodified 860.42396 0.42396131 505 A2AQ43;A2AQ44;A2AQ42;A2AQ45;A2AQ41;Q80TY0 Fnbp1 Formin-binding protein 1 yes no 0 0 0 0 4 0 1 39.954 39.954 2 0.013301 11458 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.476 43.029 39.414 56.926 0 0 83.862 86.085 37 56 0 0 83 83 1 1 0 0 1 1 4844.8 79 505 80 149 167 167 1 AAESLADPTEYENLFPGLK Unmodified 2064.0052 0.0051515425 1230 O55029 Copb2 Coatomer subunit beta' yes yes 0 0 0 0 5 0 1 87.366 87.366 3 4.2673E-05 33363 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.589 45.343 9.657 0 0 0 9.414 0 9 0 0 0 9 0 1 0 0 0 1 0 1128.8 80 1230 81 150 168 168 1 AAESSAMAATEK Unmodified 1165.5285 0.52850274 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 0 3.5 0.5 1 1 43.328 43.328 3 8.6434E-05 13015 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.522 57.353 99.148 82.051 38.255 0 115.45 19.168 93 84 37 0 111 19 2 2 1 0 2 1 9969.2 81 3380 82 151;152 169;170 170 2 AAEVLNK Unmodified 743.41775 0.41775372 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 6 0 1 47.577 47.577 2 0.012754 14101 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.17 40.577 73.777 0 43.691 30.993 73.343 76.791 69 0 42 32 74 74 1 0 1 1 1 1 8374.2 82 3020 83 153 171 171 1 AAEVPSSVVEDCDNVVTGGDPFYDR Unmodified 2697.1864 0.18643974 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;A0A087WNM0 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 2.5 0.5 1 1 72.888 72.888 3;4 1.9948E-07 27222 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.588 47.499 20.33 0 9.6355 0 0 0 19 0 9 0 0 0 1 0 1 0 0 0 4276 83 24 84 154;155 172;173 173 2 AAEVYGVR Unmodified 863.45012 0.45011648 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 5.5 0.5 1 1 41.254 41.254 2 0.0012634 11744 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.79 57.657 253.69 523.97 666.29 436.32 492.47 621.28 241 519 664 444 503 596 1 2 2 2 1 2 75324 84 3315 85 156;157 174;175 174 2 AAFDDAIAELDTLSEESYK Unmodified 2086.9583 0.95826093 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 0 5.78 2.82 1 3 1 2 1 1 96.994 96.994 3;4 4.0807E-47 32411 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 159.88 139.97 312.41 136.16 250.63 188.28 332.98 302.01 293 138 244 183 336 291 11 8 8 9 11 9 174730 85 1715 86 158;159;160;161;162;163;164;165;166 176;177;178;179;180;181;182;183;184;185;186;187;188;189;190 177 15 AAFDDAIAELDTLSEESYKDSTLIMQLLR Unmodified 3257.6013 0.60133991 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 1 13 0 1 120.75 120.75 4 3.4317E-31 45380 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.722 75.949 0 11.704 0 0 0 14.924 0 11 0 0 0 14 0 1 0 0 0 1 4002.7 86 1715 87 167 191 191 1 AAFEGVVR Unmodified 847.4552 0.45520186 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 6 0 1 49.359 49.359 2 0.046031 15004 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.252 33.124 59.639 0 75.507 95.642 80.123 67.004 56 0 74 93 83 65 1 0 1 1 1 1 4418.3 87 1903 88 168 192 192 1 AAFGLSEAGFNTACLTK Unmodified 1756.8454 0.8454202 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 8 0 1 75.07 75.07 3 5.5166E-39 25701 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 156.5 128.2 0 127.68 0 0 103.39 96.188 0 120 0 0 102 93 0 1 0 0 1 1 16999 88 2597 89 169 193 193 1 AAFGLSEAGFNTACLTK Deamidation (N) 1757.8294 0.82943578 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 1 0 0 13 0 1 74.97 74.97 3 0.013197 28429 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.724 23.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 2597 89 170 194 194 947 1 AAFLSSLTDVR Unmodified 1178.6295 0.62953741 2011 Q3UVL4 Vps51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 0 10 0 1 72.175 72.175 2 4.7531E-05 21589 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.855 51.896 0 69.16 0 131.16 0 0 0 65 0 120 0 0 0 1 0 1 0 0 7523.7 90 2011 90 171 195 195 1 AAFQLGSPWR Unmodified 1131.5825 0.58252764 1562 P47738;A0A0G2JEU1;D3YYF3 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 11.3 1.25 1 1 1 66.553 66.553 2 2.8037E-06 19007 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.81 78.789 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 28411 91 1562 91 172;173;174 196;197;198 196 3 AAFVTLLTGAK Acetyl (Protein N-term) 1132.6492 0.64921022 774 D3Z494;G5E895;S4R2G9 Akr1b10 yes no 1 0 0 0 9.4 4.32 1 1 1 1 1 105.46 105.46 2 1.0263E-42 34850 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.55 47.536 167.79 34.165 63.852 37.861 21.728 55.878 165 36 63 37 23 53 4 2 3 2 1 2 53535 92 774 92 175;176;177;178;179 199;200;201;202;203;204;205 202 7 AAGAAPLK Unmodified 697.41227 0.41227441 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 9 2.35 1 2 1 41.065 41.065 2;3 0.0036395 10472 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.15 72.564 157.26 187.65 170.41 72.138 109.49 195.15 148 194 167 74 111 186 2 3 2 1 1 2 21625 93 1275 94 180;181;182;183 206;207;208;209 206 4 AAGAAQLTVNSEK Unmodified 1258.6517 0.65172941 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 6 0 1 47.642 47.642 3 0.0045465 14184 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.467 28.269 118.03 89.248 104.41 0 120.22 154.34 111 93 102 0 120 148 1 1 1 0 1 1 5161.8 94 3249 95 184 210 210 1 AAGAEEYAQQEVVK Unmodified 1491.7205 0.72053726 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 6.25 3.96 1 1 1 1 52.6 52.6 3 3.4727E-17 17524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 131.32 94.378 454.01 469.74 371.97 404.25 643.98 638.28 427 475 380 399 646 616 4 4 4 5 3 5 226300 95 1390 96 185;186;187;188 211;212;213;214;215;216 213 6 AAGAEEYAQQEVVKR Unmodified 1647.8216 0.82164829 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 6.5 3.77 2 1 1 47.244 47.244 3;4 1.4429E-41 14993 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 180.27 160.46 634.02 606.02 588.84 257.26 537.38 756.45 597 619 588 270 544 724 4 4 3 2 2 3 103420 96 1390 97 189;190;191;192 217;218;219;220;221 217 5 AAGAPQVNSK Unmodified 941.49304 0.49304393 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6 0 1 37.054 37.054 2 3.6599E-05 9280 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.99 94.387 29.577 36.581 47.428 0 0 29.848 28 37 46 0 0 28 1 1 1 0 0 1 1784.6 97 2255 98 193 222 222 1 AAGDETGAK Unmodified 818.37701 0.37701112 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 3.5 0.5 1 1 31.231 31.231 2 0.00070628 7423 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.5 79.533 0 19.729 76.346 56.986 104.07 0 0 19 74 56 102 0 0 1 2 1 2 0 4434.5 98 1844 99 194;195 223;224 224 2 AAGDGDCGSTHSR Unmodified 1289.5055 0.50547588 2680 Q8VC30 Dak Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 0 1.5 0.5 1 1 16.554 16.554 3 9.6922E-53 2689 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 207.12 197.93 0 8.512 7.574 0 22.693 9.2748 0 8 7 0 22 9 0 1 1 0 2 1 3369.7 99 2680 100 196;197 225;226 225 2 AAGHLLK Unmodified 708.42826 0.42825883 1109 G5E8X1;Q9DCS2;E9Q7K5 0610011F06Rik UPF0585 protein C16orf13 homolog yes no 0 0 0 0 9 0 1 38.457 38.457 3 0.023313 8361 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.997 61.997 99.426 72.032 0 138.92 168.3 0 93 74 0 130 167 0 1 1 0 1 1 0 10461 100 1109 101 198 227 227 1 AAGISLIVPGK Unmodified 1024.6281 0.62808085 488 A2ALS5;A2ALS4 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 0 0 0 10 0 1 68.995 68.995 3 1.142E-05 20034 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.249 83.276 69.451 0 49.422 0 95.321 56.976 65 0 46 0 93 56 1 0 1 0 1 1 5550.3 101 488 102 199 228 228 1 AAGISLLIPGK Unmodified 1038.6437 0.64373091 489 A2ALS7 Rap1gap yes yes 0 0 0 0 12 0 1 74.123 74.123 3 0.00050099 19365 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.148 70.608 0 86.423 112.98 43.545 0 59.696 0 83 111 46 0 56 0 1 1 1 0 1 4255.9 102 489 103 200 229 229 1 AAGNQNFR Unmodified 876.42021 0.42021334 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 0 6 0 1 28.618 28.618 2 0.062214 5372 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.358 28.423 20.217 0 28.491 38.225 27.532 0 19 0 28 37 28 0 1 0 1 1 1 0 1528.3 103 2994 104 201 230 230 1 AAGQSFSQGTTGR Unmodified 1266.5953 0.59527717 636 B7ZNF6;E9QKH8;O35927;A0A2I3BQV6 Ctnnd2 Catenin delta-2 yes no 0 0 0 0 6 0 1 34.054 34.054 2 1.1912E-06 7824 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.56 87.264 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1632 104 636 105 202 231 231 1 AAGTLYTYPENWR Acetyl (Protein N-term) 1582.7416 0.74160705 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 1 0 0 0 7.67 3.09 1 1 1 74.311 74.311 2 1.1643E-15 27486 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.483 79.259 59.767 75.329 26.401 20.004 55.991 48.504 56 75 28 19 56 47 2 3 2 1 2 2 18268 105 3094 106 203;204;205 232;233;234 232 3 AAGTSGLILK Unmodified 929.55458 0.55458155 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 10 1.87 1 1 1 1 57.079 57.079 2 3.2213E-05 17244 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.35 43.758 305.91 111.36 248.87 233.28 46.807 156.43 287 116 245 227 46 148 3 2 2 2 1 2 23736 106 2629 107 206;207;208;209 235;236;237;238 235 4 AAGVAAWLPFAR Acetyl (Protein N-term) 1270.6822 0.68224168 3365 Q9Z0V2;Q9Z0V1 Kcnd2;Kcnd3 Potassium voltage-gated channel subfamily D member 2;Potassium voltage-gated channel subfamily D member 3 yes no 1 0 0 0 8.5 0.5 1 1 97.782 97.782 2 1.3983E-27 35001 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.551 58.399 0 11.32 0 0 9.414 0 0 11 0 0 9 0 0 2 0 0 1 0 6446.3 107 3365 108 210;211 239;240 240 2 AAGVEAAAEVAATEPK Acetyl (Protein N-term) 1525.7624 0.76240208 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 1 0 0 0 2.2 0.748 1 2 2 73.742 73.742 2;3 2.5901E-06 26813 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.186 38.161 72.58 46.287 33.845 69.961 8.4915 0 69 47 37 66 9 0 4 2 3 3 1 0 35576 108 3020 109 212;213;214;215;216 241;242;243;244;245 242 5 AAGVSVEPFWPGLFAK Unmodified 1674.877 0.87697832 1572 P47955;E9Q3T0 Rplp1;Gm10073 60S acidic ribosomal protein P1 yes no 0 0 0 0 10.4 1.29 2 2 2 1 90.436 90.436 2;3;4 3.7135E-12 29029 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.134 62.195 177.6 304.85 337.69 461.99 367.79 242.63 168 297 333 444 370 232 5 6 5 7 8 6 89179 109 1572 110 217;218;219;220;221;222;223 246;247;248;249;250;251;252;253;254;255;256;257 256 12 AAHEEDLQR Unmodified 1067.4996 0.49958587 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 1 0 1 25.275 25.275 3 0.0035902 4561 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.568 43.787 12.832 8.7107 0 0 11.758 23.116 12 9 0 0 12 22 1 1 0 0 1 1 9311.3 110 2559 111 224 258 258 1 AAHFVFR Unmodified 846.45006 0.4500569 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 10.8 1.48 1 1 1 1 42.851 42.851 3 0.0011612 9997 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 132.8 83.214 177.44 240.88 304.2 306.98 492.58 249.78 167 241 296 297 493 241 2 4 3 4 6 4 189640 111 71;74;949;1367 112 225;226;227;228 259;260;261;262;263;264;265 259 7 AAHNLVK Unmodified 751.43407 0.43407249 1568 P47857;A0A2R8VHV2;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 9.33 2.62 1 1 1 33.261 33.261 2;3 0.005933 7004 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.086 44.194 437.18 358.72 519.47 509.34 503.85 485.58 412 371 523 503 518 469 3 2 3 3 2 3 38556 112 1568 113 229;230;231 266;267;268 266 3 AAHVFFTDSCPDALFNELVK Unmodified 2280.0885 0.088504016 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 0 8.29 2.12 1 2 2 1 1 84.571 84.571 3;4 9.375E-30 32768 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.08 122.66 166.56 77.78 250.63 20.767 309.4 86.804 158 75 232 19 297 84 6 3 4 1 5 4 104080 113 1160 114 232;233;234;235;236;237;238 269;270;271;272;273;274;275;276;277 277 9 AAIAAAAAAAAAK Unmodified 1040.5978 0.59784335 2955 Q9CR57 Rpl14 60S ribosomal protein L14 yes yes 0 0 0 0 8 4.97 1 1 1 62.471 62.471 2;3 6.0063E-08 16563 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 115.7 96.601 59.711 143.87 0 171.55 60.923 107.24 56 139 0 158 65 102 1 3 0 3 2 2 11216 114 2955 115 239;240;241 278;279;280 279 3 AAIAQLNGK Deamidation (N) 885.49198 0.4919813 958 E9QL13;Q8C2Q3 Rbm14 RNA-binding protein 14 yes no 0 1 0 0 7 0 1 51.841 51.841 2 0.008595 15391 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.323 46.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 115 958 116 242 281 281 256 1 AAICSGK Unmodified 705.34796 0.34795959 1395;3448 P16858;A0A0A0MQF6;S4R1N5;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 8.78 3.33 1 1 2 1 1 1 1 1 37.664 37.664 2;3 0.0053749 8100 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.163 57.978 6038.1 5470.1 5530 6236.7 4614.7 6517.1 5683 5600 5695 6087 4717 6227 8 7 9 10 9 6 1490800 116 1395;3448 117 243;244;245;246;247;248;249;250;251 282;283;284;285;286;287;288;289;290;291 285 10 AAIENYVLTYK Unmodified 1283.6762 0.67615325 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 72.236 72.236 2;3 8.2156E-13 25033 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 144.55 106.25 387.89 239.5 340.1 190.82 257.67 411.31 369 241 334 186 260 391 6 4 5 4 4 4 79044 117 2479 118 252;253;254;255;256 292;293;294;295;296;297;298 292 7 AAIISAEGDSK Unmodified 1060.5401 0.5400537 1788 P67778 Phb Prohibitin yes yes 0 0 0 0 6 0.816 1 1 1 50.163 50.163 3 0.00047836 14507 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.942 44.896 118.82 0 47.792 97.788 53.852 97.601 111 0 46 93 55 93 2 0 1 2 1 2 19142 118 1788 119 257;258;259 299;300;301 301 3 AAILPTSIFLTNK Unmodified 1387.8075 0.80750177 156 A0A0R4J049;Q8CIG8;F6QQQ6 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 0 8 4.97 1 1 1 83.221 83.221 2;3 1.8303E-13 23023 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.01 100.26 20.387 9.576 28.57 79.765 26.993 39.738 19 9 28 75 28 38 1 1 1 3 1 1 12099 119 156 120 260;261;262 302;303;304;305 305 4 AAILPTSIFLTNKK Unmodified 1515.9025 0.90246479 156 A0A0R4J049;Q8CIG8;F6QQQ6 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 1 1 0 2 74.509 74.509 3;4 0.00010086 25517 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.74 57.902 69.468 54.9 0 0 0 29.848 65 56 0 0 0 28 2 2 0 0 0 1 7616.7 120 156 121 263;264 306;307 306 2 AAILQTEVDALR Unmodified 1298.7194 0.71941505 2249;1027 Q6PH08;Q3UHT7;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 6 0 1 68.696 68.696 2 0.00012906 24101 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.112 47.131 39.701 0 0 39.772 35.555 38.427 37 0 0 37 37 37 1 0 0 1 1 1 10139 121 2249;1027 122 265 308 308 1 AAIQSQLDGVR Unmodified 1156.62 0.62003536 2198 Q6KAR6;A0A1Y7VKY4 Exoc3 Exocyst complex component 3 yes no 0 0 0 0 6 0 1 49.531 49.531 2 0.010874 15142 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.102 23.546 30.044 0 0 59.634 25.549 29.119 28 0 0 55 28 28 1 0 0 1 1 1 1895.1 122 2198 123 266 309 309 1 AAITFSTESLSTPAPQVFLQATR Unmodified 2435.2696 0.2696395 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 9 0 1 84.363 84.363 4 1.6509E-06 29287 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.127 37.638 0 0 0 39.411 54.769 58.133 0 0 0 37 56 56 0 0 0 1 1 1 1680.4 123 2499 124 267 310 310 1 AAKDEVSESR Unmodified 1090.5255 0.52546627 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 8 3.56 1 1 1 30.938 30.938 3 0.00089657 6795 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.653 47.025 702.53 350.92 471.54 273.27 272.21 298.17 659 371 469 278 273 287 3 2 2 2 2 2 92639 124 1329 125 268;269;270 311;312;313 313 3 AALAALTK Unmodified 757.46979 0.46978929 1078 G3X928;Q6NZC7 Sec23ip SEC23-interacting protein yes no 0 0 0 0 10 0 1 58.889 58.889 2 0.021629 15430 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.282 32.835 59.428 64.209 56.44 0 0 0 56 65 56 0 0 0 1 1 1 0 0 0 12730 125 1078 126 271 314 314 1 AALAELVALPCFFTLQPR Unmodified 2016.0867 0.086653523 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 9 4.66 2 3 2 1 103.51 103.51 2;3;4 1.7163E-13 28993 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.46 94.92 28.269 11.056 2.164 35.866 71.784 42.069 27 11 2 33 72 40 3 2 1 4 5 5 104680 126 144 127 272;273;274;275;276;277;278;279 315;316;317;318;319;320;321;322;323;324;325;326;327 325 13 AALAGGTTMIIDHVVPEPGSSLLTSFEK Unmodified 2840.463 0.46299594 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 7.5 0.5 2 2 89.39 89.39 4;5 1.9192E-22 32392 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.856 60.851 28.558 69.28 17.911 50.304 37.714 38.366 28 66 19 47 37 37 2 3 1 2 1 2 12352 127 1850;2212 128 280;281;282;283 328;329;330;331;332 332 5 AALAGGTTMIIDHVVPEPGTSLLAAFDQWR Unmodified 3136.6016 0.6015551 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 9.38 2.29 2 2 1 1 2 97.685 97.685 3;4;5 1.9235E-50 34993 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.78 119.25 133.98 78.372 112.76 74.268 93.771 65.34 127 78 109 71 93 63 8 5 6 5 6 6 167540 128 1158 129 284;285;286;287;288;289;290;291 333;334;335;336;337;338;339;340;341;342;343;344;345;346;347;348;349;350;351 345 19 AALAGGTTMIIDHVVPEPGTSLLAAFDQWR Oxidation (M) 3152.5965 0.59646973 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 0 8.67 0.471 1 2 94.91 94.91 4 2.65E-08 33703 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.351 39.849 7.4117 17.481 6.3857 24.758 12 24.518 7 17 7 23 12 23 1 2 1 2 1 1 12340 129 1158 129 292;293;294 352;353;354;355 354 53 4 AALAHSEIATTQAASTK Unmodified 1669.8635 0.8635131 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 7 0 1 45.163 45.163 3 0.017556 12281 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.112 15.731 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1412.6 130 3266 130 295 356 356 1 AALAIQGK Unmodified 770.46504 0.46503826 2257 Q6W8Q3 Pcp4l1 Purkinje cell protein 4-like protein 1 yes yes 0 0 0 0 11.5 1.5 1 1 49.658 49.658 2 0.00039487 11770 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.69 55.539 78.948 0 76.269 76.336 0 0 74 0 74 74 0 0 1 0 1 1 0 0 5193.1 131 2257 131 296;297 357;358 357 2 AALAPLPPLPAQFK Acetyl (Protein N-term) 1474.8548 0.85478632 2953 Q9CR26;F8WJC2 Vta1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 1 0 0 0 10.5 2.5 1 1 93.083 93.083 2;3 6.4246E-05 37063 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.14 40.583 0 19.152 20.558 20.627 7.4487 69.077 0 18 19 19 9 65 0 1 1 1 1 2 7296.4 132 2953 132 298;299 359;360 360 2 AALAQAADCEVEQWNSDDPIPR Unmodified 2455.1074 0.10740156 2781 Q91Z53;D6REG4 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 0 3 0 1 76.363 76.363 4 2.2241E-12 28818 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.959 63.346 9.5582 8.7783 9.1631 0 29.288 0 9 9 9 0 28 0 1 1 1 0 1 0 2345.9 133 2781 133 300 361 361 1 AALCAVHVIR Unmodified 1108.6175 0.61753293 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 9 0 1 47.179 47.179 3 0.0030972 11804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.828 46.834 119.1 0 0 0 235.01 131.87 111 0 0 0 229 130 1 0 0 0 1 1 6879.3 134 1436 134 301 362 362 1 AALCHFIVDELNAK Unmodified 1599.8079 0.80791248 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 8.71 1.91 2 2 2 1 75.497 75.497 3;4 1.2966E-31 26607 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 164.81 124.53 168.03 423.35 371.86 311.99 333.45 459.68 158 418 370 306 333 435 3 7 5 5 5 6 111380 135 1478 135 302;303;304;305;306;307;308 363;364;365;366;367;368;369;370;371 364 9 AALEAVGGTVVLE Unmodified 1227.6711 0.67106787 3108 Q9DB15 Mrpl12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 0 6 0 1 78.916 78.916 2 0.0072421 28951 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.398 36.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 136 3108 136 309 372 372 1 AALEELVR Unmodified 899.50763 0.50763136 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5 0 1 60.074 60.074 2 0.038744 20784 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.214 34.572 49.358 0 0 49.249 54.683 47.476 46 0 0 46 56 46 1 0 0 1 1 1 2709.2 137 2105 137 310 373 373 1 AALEEVEGDVAELELK Unmodified 1713.8673 0.86726108 409 D4AFX6;A0A338P6P6;Q6ZQK5;A0A2R8W6H4 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 3.5 0.5 1 1 87.022 87.022 3 3.1937E-06 33124 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.46 67.507 12.876 0 0 16.395 0 20.254 12 0 0 15 0 19 1 0 0 1 0 1 2148.5 138 409 138 311;312 374;375 375 2 AALEGFLAALQGDPPQAER Unmodified 1952.9956 0.99558991 147 A0A0R4IZZ1;Q03157 Aplp1 Amyloid-like protein 1;C30 yes no 0 0 0 0 9.5 0.5 1 1 90.964 90.964 3 6.3523E-09 32235 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.155 58.238 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 139 147 139 313;314 376;377 376 2 AALEQPCEGSLTR Unmodified 1430.6824 0.68237762 1835 P84086 Cplx2 Complexin-2 yes yes 0 0 0 0 4 0 1 47.57 47.57 3 0.0051293 15071 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.929 35.053 29.761 0 47.537 46.795 34.536 58.71 28 0 46 46 37 56 1 0 1 1 1 1 4269.5 140 1835 140 315 378 378 1 AALEQPCEGSLTRPK Unmodified 1655.8301 0.83010449 1835 P84086 Cplx2 Complexin-2 yes yes 0 0 0 1 7.75 3.11 1 1 1 1 46.937 46.937 3 1.0758E-29 13964 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 157.2 131.61 813.89 807.92 1024.5 353.33 255.63 921.19 768 827 1010 348 259 871 4 4 4 2 2 4 133620 141 1835 141 316;317;318;319 379;380;381;382 380 4 AALESGVSTK Unmodified 961.50803 0.50802529 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 6 0 1 45.734 45.734 2 3.9024E-05 13345 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.68 51.457 0 0 37.931 47.203 43.281 77.649 0 0 37 46 46 74 0 0 1 1 1 1 4042.7 142 3341 142 320 383 383 1 AALEYLEDIDLK Unmodified 1391.7184 0.718412 1953 Q3U125;Q9CYH2;D3YYG8;D3Z398;D3Z252;D3Z0A8;D3Z143;D3YWL4 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 0 5 0 1 85.728 85.728 3 0.018515 32706 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.809 24.945 9.657 0 0 20.767 0 0 9 0 0 19 0 0 1 0 0 1 0 0 1176.3 143 1953 143 321 384 384 1 AALLAELASLEADALR Unmodified 1625.8988 0.89883598 1938 Q3TW96 Uap1l1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes yes 0 0 0 0 8 0 1 101.53 101.53 3 0.038997 35864 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.815 11.586 0 29.792 0 0 0 9.594 0 28 0 0 0 9 0 1 0 0 0 1 651.51 144 1938 145 322 385 385 1 AALLDQIR Unmodified 898.52362 0.52361577 2770 Q91YD9 Wasl Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 0 8 0 1 58.348 58.348 2 0.046031 17867 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.252 22.338 69.409 0 56.412 85.975 73.455 0 65 0 56 83 74 0 1 0 1 1 1 0 6340.4 145 2770 146 323 386 386 1 AALPAGEGGSPEGAK Unmodified 1310.6466 0.64664404 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 4.5 0.5 2 2 45.864 45.864 3;4 1.726E-05 14305 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.746 57.37 177.92 184.33 218.92 237.47 141.85 205.08 167 185 222 232 148 195 2 3 4 4 2 3 34610 146 90 147 324;325;326;327 387;388;389;390;391 387 5 AALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFAR Unmodified 4165.0725 0.072483382 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 11 0 2 95.828 95.828 4;5 1.0361E-16 31081 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.282 56.871 40.774 0 0 20.608 8.4674 20.254 38 0 0 19 9 19 2 0 0 1 1 1 12848 147 3011 148 328;329 392;393;394 392 3 AALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFAR Deamidation (N) 4166.0565 0.056498967 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 1 0 0 12 0 1 95.801 95.801 5 2.1258E-08 27455 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.429 42.807 0 0 9.471 5.9935 0 0 0 0 9 6 0 0 0 0 1 1 0 0 1150.2 148 3011 148 330 395 395 1047 1 AALQALK Unmodified 713.44357 0.44357454 3091 Q9D8B3;Q9D7F7 Chmp4b;Chmp4c Charged multivesicular body protein 4b;Charged multivesicular body protein 4c yes no 0 0 0 0 10.5 0.5 1 1 53.065 53.065 2 0.012506 12996 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.7 31.586 127.49 88.029 139.16 119.39 184.8 93.865 120 93 139 120 185 93 1 1 1 1 1 1 22561 149 3091 149 331;332 396;397 396 2 AALQEEEQASK Unmodified 1202.5779 0.57789577 810 E0CZ72;P28740 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 3.5 0.5 1 1 43.461 43.461 2;3 1.0573E-05 13112 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.898 61.202 0 29.792 38.364 37.49 35.33 147.17 0 28 37 37 37 139 0 1 1 1 1 2 6373.7 150 810 150 333;334 398;399;400 400 3 AALQELLSK Unmodified 971.56515 0.56514624 289 A0A1L1SQA8;P62852 Rps25 40S ribosomal protein S25 yes no 0 0 0 0 9 0 1 72.736 72.736 2 0.0014028 23945 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.249 47.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 151 289 151 335 401 401 1 AALQNTTLQSLGLTGGSATIR Unmodified 2072.1226 0.12258134 2677 Q8VBT9;F7CRQ2;A2AC02;A2AC03;A2AC05;A2ABZ8 Aspscr1 Tether containing UBX domain for GLUT4 yes no 0 0 0 0 10 0 1 72.143 72.143 3 7.3323E-07 21561 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.574 40.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 152 2677 152 336 402 402 1 AALQVEEESWNAYPYTR Unmodified 2025.9432 0.94321999 1215 O35954;D3YXW5 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes no 0 0 0 0 5 0 1 69.439 69.439 3 0.0022873 25103 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.794 27.367 0 29.5 17.494 29.048 27.285 19.475 0 28 19 28 28 19 0 1 1 1 1 1 3184.9 153 1215 153 337 403 403 1 AALSGANVLTLIEK Unmodified 1398.8082 0.80823006 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 82.833 82.833 3 2.5208E-05 32134 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.875 53.893 30.044 0 58.489 127.27 108 126.95 28 0 56 121 111 121 1 0 1 3 3 3 15873 154 175 154 338;339;340;341;342 404;405;406;407;408 408 5 AALSGLLHR Unmodified 936.5505 0.55049923 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 10.5 0.5 1 1 51.016 51.016 3 6.9466E-06 12093 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.71 112.97 88.718 35.61 27.099 68.541 47.277 69.29 83 37 28 65 46 65 2 1 1 2 1 1 39273 155 2834 155 343;344 409;410 409 2 AALSHGSHQQR Unmodified 1190.5905 0.59046656 869 F7BX42;E9PZM8;Q99J85;H3BLN6;F8VQB8 Nptxr;Npcd Neuronal pentraxin receptor yes no 0 0 0 0 7 0 1 19.909 19.909 4 0.00057918 2972 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.2 55.258 6.438 0 0 9.837 0 9.594 6 0 0 9 0 9 1 0 0 1 0 1 673.56 156 869 156 345 411 411 1 AALSSFQK Unmodified 850.45487 0.45486751 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 9.5 0.5 1 1 53.05 53.05 2 0.00021851 12897 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.34 90.661 108.39 84.551 106 204.31 107.64 0 102 88 107 204 107 0 1 1 1 2 1 0 23158 157 1692 157 346;347 412;413 413 2 AALTDVQR Acetyl (Protein N-term) 914.48214 0.48214489 3367 Q9Z0Y1;E9Q919 Dctn3 Dynactin subunit 3 yes no 1 0 0 0 1 0 1 48.08 48.08 2 4.9853E-60 14333 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.37 95.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 158 3367 158 348 414 414 1 AALTLTPSAVNK Unmodified 1184.6765 0.6764876 357 A0A286YCW6;I3ITR1;Q9D924 AK157302;Isca1 Iron-sulfur cluster assembly 1 homolog, mitochondrial yes no 0 0 0 0 9 0 1 59.74 59.74 2 3.8453E-15 17784 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142 82.75 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 2156.9 159 357 159 349 415 415 1 AALTQYSAK Unmodified 951.50255 0.50254598 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 8 0 2 48.349 48.349 2;3 0.00059189 13115 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.73 71.693 39.316 76.642 189.96 0 82.835 155.4 37 74 180 0 83 148 1 1 2 0 1 2 11611 160 573 160 350;351 416;417 417 2 AALVEPLGLER Acetyl (Protein N-term) 1208.6765 0.6764876 1283 O88951 Lin7b Protein lin-7 homolog B yes yes 1 0 0 0 3.5 0.5 1 1 81.872 81.872 2 1.184E-05 30877 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.998 66.15 3.1879 6.169 0 13.116 0 6.396 3 6 0 12 0 6 1 1 0 1 0 1 5722.8 161 1283 161 352;353 418;419 419 2 AALVGGTTMIIGHVLPDKETSLVEAYEK Unmodified 2941.5471 0.54705992 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 1 8 0 1 82.401 82.401 5 0.00093891 29224 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.783 33.688 0 0 19.269 28.93 27.959 0 0 0 19 28 28 0 0 0 1 1 1 0 1727.7 162 3172 162 354 420 420 1 AALVVSETAEPGSR Acetyl (Protein N-term) 1427.7256 0.72562264 2052 Q5NCQ5 Dph1 Diphthamide biosynthesis protein 1 yes yes 1 0 0 0 2 0 1 65.305 65.305 2 0.0041959 23282 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.829 28.443 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 2234 163 2052 163 355 421 421 1 AALYAAPYK Unmodified 966.51747 0.51746776 753 Q9JL62;D3Z1H9;D3Z1H8 Gltp Glycolipid transfer protein yes no 0 0 0 0 9 0 1 55.994 55.994 2 0.00092923 15986 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.63 70.53 0 0 85.548 95.575 51.857 67.81 0 0 83 93 56 65 0 0 1 1 1 1 4649.5 164 753 164 356 422 422 1 AALYVVAIEDR Unmodified 1218.6608 0.66083754 2231 Q6PAK3 Prmt8 Protein arginine N-methyltransferase 8 yes yes 0 0 0 0 7 0 1 68.88 68.88 2 0.0053228 23463 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.27 39.016 39.342 0 60.394 0 36.688 58.649 37 0 56 0 37 56 1 0 1 0 1 1 1609 165 2231 165 357 423 423 1 AAMIWIVGEYAER Unmodified 1507.7493 0.74933497 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 10 1.51 1 2 2 1 1 83.882 83.882 2;3 2.5307E-15 26595 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 140.3 104.89 157.42 60.436 90.209 128.41 136.43 184.79 149 62 89 121 140 177 5 3 3 3 3 5 34889 166 1203;3123 166 358;359;360;361;362;363;364 424;425;426;427;428;429;430;431 428 8 AANAASGAGGSSAAAGSR Unmodified 1432.6655 0.665482 6 A0A087WNP6;Q4VAA2 Cdv3 Protein CDV3 yes no 0 0 0 0 9 4 1 1 26.454 26.454 3 5.0332E-07 4876 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.557 68.243 5.365 0 9.3245 9.2813 0 9.594 5 0 9 9 0 9 1 0 1 1 0 1 4443.5 167 6 167 365;366 432;433 432 2 AANATTNPSQLLPLELVDK Acetyl (Protein N-term) 2036.079 0.078985188 132 A0A0N4SVK3;P62322 Lsm5 U6 snRNA-associated Sm-like protein LSm5 yes no 1 0 0 0 5 0 1 94.247 94.247 3 3.6146E-07 35193 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.745 39.381 13.887 0 10.493 5.7673 8.7916 10.409 13 0 10 6 9 10 1 0 1 1 1 1 2399 168 132 168 367 434 434 1 AANEAGYFNEEMAPIEVK Unmodified 1981.9091 0.90914267 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 4 0 1 71.789 71.789 3 5.6352E-05 26162 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.87 44.991 0 9.576 0 30.604 0 0 0 9 0 28 0 0 0 1 0 1 0 0 2471.6 169 2472 169 368 435 435 1 AANEVSSADVK Deamidation (N) 1090.5142 0.51423288 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 1 0 0 3 0 2 43.899 43.899 3 0.0017831 14033 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.739 57.427 29.872 38.758 65.395 55.199 112.26 38.143 28 37 65 56 111 37 1 1 2 2 2 1 4859.2 170 13 170 369;370 436;437 437 0 2 AANEVSSADVK Unmodified 1089.5302 0.5302173 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 6.5 3.77 2 1 1 42.055 42.055 2;3 3.1662E-33 12170 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 191.52 105.84 282.49 125.94 204.48 148.33 124.88 0 265 130 200 148 121 0 4 3 3 3 2 0 67939 171 13 170 371;372;373;374 438;439;440;441 440 4 AANGVVLATEK Deamidation (N) 1072.5764 0.57643921 1589 P49722 Psma2 Proteasome subunit alpha type-2 yes yes 0 1 0 0 5 0 1 54.529 54.529 2 1.9433E-07 18131 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.83 88.957 59.283 96.199 95.167 107.03 92.342 86.895 56 93 92 102 93 83 2 3 2 3 2 2 4947.5 172 1589 171 375 442;443;444;445 443 604 4 AANKTPPK Unmodified 825.47085 0.47085192 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 1 8 0 1 32.948 32.948 3 0.057804 6177 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.37 10.732 98.242 108.67 167.87 130.44 87.308 115.83 93 111 167 130 93 111 1 1 1 1 1 1 4625.7 173 2291 172 376 446 446 1 AANNGALPPDLSYIVR Deamidation (N) 1670.8628 0.86278482 3030 Q9D0M3;A0A2R8VHK1 Cyc1 Cytochrome c1, heme protein, mitochondrial yes no 0 1 0 0 9.5 3.5 1 1 73.895 73.895 3 3.2977E-05 26532 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.62 55.016 98.652 79.593 123.65 44.775 83.488 37.06 93 83 121 46 83 37 2 2 2 1 1 1 34881 174 3030 173 377;378 447;448 447 1058 2 AANVVASTK Unmodified 859.47633 0.47633123 3239 Q9JKY5 Hip1r Huntingtin-interacting protein 1-related protein yes yes 0 0 0 0 7 0 1 41.726 41.726 2 0.021304 10666 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.076 36.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 175 3239 174 379 449 449 1 AAPAAAAAMAPPGPR Unmodified 1318.6816 0.68158975 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10 3 1 1 47.928 47.928 2 1.3843E-21 13809 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.66 89.503 0 29.181 36.579 38.261 0 0 0 28 37 37 0 0 0 1 1 1 0 0 4430.7 176 2433 175 380;381 450;451 450 2 AAPAPSLISVFSSPQELGASLAQLVAQR Acetyl (Protein N-term) 2849.5287 0.52870774 2911 Q9CQ60;Q8CBG6 Pgls 6-phosphogluconolactonase yes no 1 0 0 0 11 2 1 1 121.25 121.25 3 2.2765E-08 40021 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.321 31.922 0 0 0 0 2 6 0 0 0 0 2 6 0 0 0 0 1 1 6725.1 177 2911 176 382;383 452;453 452 2 AAPDITGHK Unmodified 908.47158 0.4715802 1841 P97300;H3BIX4;Z4YLB7 Nptn Neuroplastin yes no 0 0 0 0 8.67 3.09 1 1 1 38.33 38.33 3 0.0010595 10020 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.647 48.547 335.42 552.44 670.58 608.18 640.93 717.25 315 551 677 599 663 690 1 3 3 2 3 3 111100 178 1841 177 384;385;386 454;455;456 454 3 AAPEINNIIEEATDFIK Unmodified 1886.9626 0.96255845 1117 H3BJ77;Q9DB70 Fundc1 FUN14 domain-containing protein 1 yes no 0 0 0 0 5 0 1 99.649 99.649 3 6.9909E-05 35933 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.477 22.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 179 1117 178 387 457 457 1 AAPFTLEYR Unmodified 1066.5447 0.54474515 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 8.5 2.69 1 1 1 1 60.36 60.36 2 0.00050896 18810 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.08 96.375 128.08 86.391 228.44 212.86 178.12 163.35 120 83 222 204 185 158 1 1 2 2 2 2 56768 180 3085 179 388;389;390;391 458;459;460;461 460 4 AAPGFPR Unmodified 714.38131 0.38130863 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 0 7.5 0.5 1 1 41.692 41.692 2 0.021831 10616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.94 64.372 227.24 150.18 92.174 194.6 112.29 108.73 213 157 93 185 111 102 2 2 1 2 1 1 40080 181 2125 180 392;393 462;463 462 2 AAPGGASPTIFSR Unmodified 1230.6357 0.63568542 3033 Q9D0S9 Hint2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 51.873 51.873 2 1.6346E-10 15443 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.02 76.919 59.478 64.347 47.994 0 86.867 29.041 56 65 46 0 84 28 2 2 1 0 2 1 10698 182 3033 181 394;395 464;465 464 2 AAPGYHMAK Unmodified 944.45382 0.45382165 2555;3331;1969 Q8CI94;Q9WUB3;E9PUM3;Q3UEJ6;Q9ET01 Pygb;Pygm;Pygl Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form no no 0 0 0 0 9.33 2.62 1 1 1 37.367 37.367 3 0.0017934 9951 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.478 53.45 445.62 536.64 662.03 323.34 454.23 801.46 420 543 657 315 459 764 2 3 3 2 2 3 28491 183 2555;3331;1969 182 396;397;398 466;467;468 468 3 AAPILFASAALALGSSLALK Unmodified 1884.1084 0.10843482 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 13 0 1 113.75 113.75 3 1.9408E-22 44760 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.32 113.02 26.707 6.0526 14.699 6.558 0 19.188 25 7 14 6 0 18 2 1 1 1 0 2 1439.7 184 3216 183 399 469;470 469 2 AAPLAGFGYGLPISR Unmodified 1488.8089 0.80889876 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 76.895 76.895 2;3 6.5502E-05 23061 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.939 68.749 0 29.152 78.319 0 57.918 19.168 0 28 74 0 56 19 0 1 2 0 2 1 17185 185 2806 184 400;401 471;472 472 2 AAPLSLCALTAVDQSVLLLKPEAK Unmodified 2507.4033 0.40329621 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 1 9 0 1 92.654 92.654 4 0.00022551 32959 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.848 41.092 29.952 18.196 0 0 0 39.442 28 19 0 0 0 37 1 1 0 0 0 1 2518 186 2141 185 402 473 473 1 AAPLVPLSQQIPGGNPLYESYYK Acetyl (Protein N-term) 2546.3057 0.30569066 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 1 0 0 0 7 0 1 94.583 94.583 3 3.7099E-12 34906 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.672 40.84 9.612 8.9279 0 20.608 8.4674 0 9 9 0 19 9 0 1 1 0 1 1 0 2957.3 187 2095 186 403 474 474 1 AAPPDLQDEPLSLGSPGSQWFGGR Acetyl (Protein N-term) 2523.203 0.2030165 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 1 0 0 0 8.5 4.5 1 1 92.169 92.169 3 6.2662E-05 36682 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.669 25.077 0 0 0 7.5198 6.9766 0 0 0 0 7 7 0 0 0 0 1 1 0 3675.6 188 2583 187 404;405 475;476 476 2 AAPPPPPPPPPPLGADR Unmodified 1642.8831 0.88312633 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 6 0 1 55.161 55.161 3 0.00054107 17638 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.193 23.332 39.292 26.368 46.343 37.014 35.352 48.027 37 28 46 37 37 46 1 1 1 1 1 1 6889.7 189 811 188 406 477 477 1 AAPQWCQGK Unmodified 1044.4811 0.48109903 1157 O08539 Bin1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 46.489 46.489 2;3 0.0025388 12289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.692 47.662 255.3 222.47 364.89 248.61 211.99 329.74 241 231 361 251 222 315 3 3 3 3 2 2 20564 190 1157 189 407;408;409 478;479;480 479 3 AAPSEVAAAVLGEGDGGAFGSWLDGR Acetyl (Protein N-term) 2501.1823 0.18228106 887 E9Q2S9;Q9CR29 Ccdc43 Coiled-coil domain-containing protein 43 yes no 1 0 0 0 5 0 1 108.67 108.67 3 6.9793E-12 36559 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.939 33.12 0 0 0 1.0546 2.0436 0 0 0 0 1 2 0 0 0 0 1 1 0 600.27 191 887 190 410 481 481 1 AAPSTADEGWDNQNW Unmodified 1660.6754 0.67537798 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 2.5 0.5 1 1 68.919 68.919 3 0.0024832 24998 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 49.929 44.946 29.987 20.216 9.5868 20.246 27.69 29.058 28 19 9 19 28 28 1 1 1 1 1 2 14168 192 3453 191 411;412 482;483 482 2 AAPYWLDEPK Unmodified 1188.5815 0.58152458 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 7.33 2.62 1 2 2 1 65.523 65.523 2;3 3.059E-05 21829 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.23 74.417 178.17 198.88 154.85 211.97 221.17 213.59 167 195 158 204 223 205 3 4 4 4 4 5 43647 193 20;2354 192 413;414;415;416;417;418 484;485;486;487;488;489 487 6 AAQAVSLLR Acetyl (Protein N-term) 969.56073 0.56072956 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 1 0 0 0 5 0 1 69.206 69.206 2 3.0198E-05 24989 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.31 73.723 0 18 0 0 0 0 0 18 0 0 0 0 0 1 0 0 0 0 3545.5 194 2418 193 419 490 490 1 AAQDRDQIYR Unmodified 1234.6054 0.60544792 1053 F8WJG3;P62996 Tra2b Transformer-2 protein homolog beta yes no 0 0 0 1 3.5 0.5 1 1 30.031 30.031 3 0.00093873 6914 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.263 55.31 0 48.944 0 0 0 69.29 0 46 0 0 0 65 0 1 0 0 0 1 8810.5 195 1053 194 420;421 491;492 492 2 AAQEEYIK Unmodified 950.47091 0.4709115 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 6.29 3.01 1 1 1 2 1 1 45.123 45.123 2;3 2.9298E-10 13944 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.73 93.238 1948.7 1966.7 1772.6 2037.4 2085.2 2255.4 1832 1993 1820 1990 2138 2170 7 7 7 7 8 8 527380 196 1309 195 422;423;424;425;426;427;428 493;494;495;496;497;498;499;500;501 494 9 AAQEEYIKR Unmodified 1106.572 0.57202253 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 7 3.16 1 1 1 1 1 37.752 37.752 3 1.7554E-05 10103 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.99 80.976 3089.1 1712.2 4150.5 2665.5 2730.7 3020.3 2910 1789 4055 2712 2816 2888 5 3 5 5 4 4 382410 197 1309 196 429;430;431;432;433 502;503;504;505;506 503 5 AAQGEPQVQFK Acetyl (Protein N-term) 1243.6197 0.619701 1744 P62827;Q61820 Ran;Rasl2-9 GTP-binding nuclear protein Ran;GTP-binding nuclear protein Ran, testis-specific isoform yes no 1 0 0 0 6.5 3.77 2 1 1 58.465 58.465 2;3 1.9935E-05 20188 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.283 41.777 157.72 250.94 303.73 262.28 248.98 212.49 148 250 305 260 250 205 2 5 5 5 4 4 73470 198 1744 197 434;435;436;437 507;508;509;510;511;512 511 6 AAQGPAGSPDK Unmodified 997.48287 0.48287317 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 5 0 1 34.22 34.22 3 0.001456 8341 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.435 31.626 0 38.257 66.464 35.262 64.75 47.188 0 37 65 37 65 46 0 1 1 1 1 1 3243.1 199 573 198 438 513 513 1 AAQIPESDQIK Acetyl (Protein N-term) 1240.6299 0.62993134 3347 Q9WV98;A0A1Y7VL11;A0A1Y7VIZ6 Timm9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 1 0 0 0 5.5 4.39 1 1 1 1 58.704 58.704 2 2.7104E-08 20315 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.464 43.807 68.982 76.843 105.55 93.979 73.345 28.82 65 75 102 93 74 28 2 2 2 3 2 1 57957 200 3347 199 439;440;441;442 514;515;516;517 517 4 AAQLAIR Unmodified 741.44972 0.44972255 1756 P62911;P17932 Rpl32;Rpl32-ps 60S ribosomal protein L32;Putative 60S ribosomal protein L32' yes no 0 0 0 0 7 0 1 42.858 42.858 2 0.023216 11175 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.29 14.552 68.853 82.329 80.204 96.869 0 108.73 65 83 83 93 0 102 1 1 1 1 0 1 9009.6 201 1756 200 443 518 518 1 AAQLATEIADIK Unmodified 1242.682 0.68196691 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 6 0 1 73.227 73.227 3 0.00067883 26316 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.091 32.76 29.87 0 29.322 18.485 28.439 0 28 0 28 19 28 0 1 0 1 1 1 0 2101.5 202 2424 201 444 519 519 1 AAQLCGAGMAAVVEK Unmodified 1474.7272 0.72721932 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 10.2 2.77 1 1 2 62.879 62.879 2;3 8.5713E-11 22425 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.59 88.746 256.99 124.07 164.25 287.82 332.12 86.71 241 130 167 278 333 83 4 2 3 4 4 1 46755 203 1055 202 445;446;447;448 520;521;522;523 523 4 AAQLGFGGVYVR Unmodified 1236.6615 0.66150624 180 A0A0R4J0P1;D3YTT4;Q9D7B6 Acad8 Isobutyryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 10 0 1 63.669 63.669 2 3.8842E-10 17611 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.84 67.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 204 180 203 449 524 524 1 AAQLQGLSHFLR Unmodified 1339.7361 0.73606817 2325 Q80VQ0 Aldh3b1 Aldehyde dehydrogenase family 3 member B1 yes yes 0 0 0 0 10 0 1 62.478 62.478 3 0.003837 17207 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.875 16.651 0 38.901 27.962 0 37.384 38.375 0 37 28 0 37 37 0 1 1 0 1 1 4215.8 205 2325 204 450 525 525 1 AAQQRPEEVR Unmodified 1182.6105 0.6105333 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 1 4 0 1 23.604 23.604 3 0.029872 4140 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.278 15.945 29.647 46.488 27.357 0 0 29.848 28 46 28 0 0 28 1 1 1 0 0 1 2883.1 206 2845 205 451 526 526 1 AAQSPQQHSSGDPTEEESPV Unmodified 2079.8981 0.89812029 1616 P53986 Slc16a1 Monocarboxylate transporter 1 yes yes 0 0 0 0 1 0 1 39.319 39.319 3 1.4682E-05 10898 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.383 46.219 29.992 0 8.6847 20.249 0 0 28 0 9 19 0 0 1 0 1 1 0 0 7905.9 207 1616 206 452 527 527 1 AAQSTAMNR Unmodified 948.44471 0.44471353 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7 3.16 1 1 1 1 1 25.813 25.813 2 2.9851E-13 4592 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 179.37 130.31 204.42 138.5 277.03 159.31 203.55 253 192 147 270 159 208 242 2 4 4 3 3 3 43926 208 1554 207 453;454;455;456;457 528;529;530;531;532 529 5 AAQTELGQQILADFEEAFPSQGTK Unmodified 2578.2551 0.25511165 915 E9Q648;Q8CCB4;F6Z4G7;E9PYD3;E9PXG9 Vps53 Vacuolar protein sorting-associated protein 53 homolog yes no 0 0 0 0 6 0 1 98.194 98.194 4 3.1168E-12 36820 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.052 58.123 6.438 0 0 11.9 6.5255 7.2758 6 0 0 11 7 7 1 0 0 1 1 1 815.49 209 915 208 458 533 533 1 AASAASSEHFEK Acetyl (Protein N-term) 1275.5731 0.57314474 1264 Q91XH6;O88384;E0CYE5 Vti1b Vesicle transport through interaction with t-SNAREs homolog 1B yes no 1 0 0 0 2 0 1 43.178 43.178 2 0.00015476 13245 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.706 16.896 0 0 8.8479 19.981 13.726 0 0 0 9 19 14 0 0 0 1 1 1 0 1918.7 210 1264 210 459 534 534 1 AASADSTTEGTPTDGFTVLSTK Unmodified 2156.0121 0.012087414 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 0 5 0 1 65.877 65.877 3 3.7821E-08 23404 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.361 36.823 39.613 6.7523 9.1332 0 29.288 0 37 9 9 0 28 0 1 1 1 0 1 0 3570 211 3296 211 460 535 535 1 AASAEEQATIER Unmodified 1274.6103 0.61025853 2332 Q80X85 Mrps7 28S ribosomal protein S7, mitochondrial yes yes 0 0 0 0 2 0 1 37.667 37.667 2 0.0013922 10759 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.536 48.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 212 2332 212 461 536 536 1 AASAFFTYVSLNQEGK Unmodified 1731.8468 0.84680041 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 10.5 0.5 1 1 79.125 79.125 3;4 1.495E-06 24195 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.3 71.48 29.705 67.157 0 69.851 174.49 37.63 28 65 0 65 176 37 1 1 0 1 2 1 19733 213 852 213 462;463 537;538 538 2 AASAFFTYVSLNQEGKPMPVPQLVPETEDEK Unmodified 3421.6752 0.67517356 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 8.67 0.471 1 2 86.704 86.704 4;5 6.2707E-06 30374 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.101 43.941 20.265 38.899 48.501 57.056 73.784 29.091 19 37 47 55 74 28 1 2 2 2 2 1 6848.4 214 852 214 464;465;466 539;540;541 540 3 AASAGVPYHGEVPVSLAR Unmodified 1779.9268 0.92678206 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6 1 1 1 53.576 53.576 3 2.5344E-07 16129 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.758 65.62 59.229 46.821 104.74 56.585 100.13 115.47 56 46 102 56 102 111 2 1 2 1 2 2 19543 215 2186 215 467;468 542;543 543 2 AASAHAIGTVK Unmodified 1024.5665 0.56654322 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 7.5 0.5 1 1 37.115 37.115 3 0.00014496 7822 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.937 60.565 59.394 106.7 226.22 163.46 297 179.14 56 102 222 167 297 176 1 1 2 2 2 2 18802 216 1495 216 469;470 544;545 545 2 AASAYAVGDVK Unmodified 1050.5346 0.53457439 68 A0A0A6YX73;Q8K1M3 Prkar2a yes no 0 0 0 0 8 3.56 1 1 1 50.029 50.029 2;3 6.0957E-16 16100 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 162.36 120.37 118.52 58.304 173.96 83.744 120.35 117.29 111 56 167 84 120 111 2 1 2 2 2 2 16969 217 68 217 471;472;473 546;547;548 548 3 AASCLEGDR Unmodified 977.42364 0.42364373 2911 Q9CQ60;Q8CBG6;F6X8L5 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 8.5 4.5 1 1 34.12 34.12 2 0.005294 8854 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.998 39.649 99.436 36.703 28.267 87.27 93.787 76.208 93 37 28 83 93 74 2 1 1 2 1 2 7931.7 218 2911 218 474;475 549;550 549 2 AASDELSK Unmodified 819.39741 0.39741221 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 4 0 1 41.218 41.218 2 0.023518 12105 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.879 35.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 219 2182 219 476 551 551 1 AASDIAMTELPPTHPIR Unmodified 1818.9298 0.92981853 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 0 6.6 3.26 1 2 1 1 57.018 57.018 3;4 1.8626E-25 19285 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.34 114.22 337.15 252.76 276.94 369.64 360.81 192.75 316 250 268 352 361 185 5 6 4 7 6 4 62209 220 1715 220 477;478;479;480;481 552;553;554;555;556;557;558;559;560 553 9 AASEFESAEGISLFPELR Unmodified 1951.9527 0.95272204 3163 Q9EPL2 Clstn1 Calsyntenin-1;Soluble Alc-alpha;CTF1-alpha yes yes 0 0 0 0 4.5 0.5 1 1 84.286 84.286 3 0.0092868 32000 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.996 26.613 20.139 28.135 17.906 49.435 46.214 19.732 19 28 19 47 47 19 1 1 1 2 2 1 3328.5 221 3163 221 482;483 561;562 562 2 AASELYTK Acetyl (Protein N-term) 923.46001 0.46001246 728 D3YZ62;D3Z4J3;Q99104;D6RFU0 Myo5a Unconventional myosin-Va yes no 1 0 0 0 4 0 1 57.412 57.412 2 0.0011174 19820 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.252 65.252 78.95 0 75.897 84.705 79.27 106.47 74 0 74 83 83 102 1 0 1 1 1 1 12465 222 728 222 484 563 563 1 AASEYENEIR Unmodified 1180.536 0.53603095 791 F6UV57;F6YCM8;F8WIH0;D3Z7V3;H7BX64;Q3URD3 Slmap Sarcolemmal membrane-associated protein yes no 0 0 0 0 2 0 1 42.908 42.908 2 0.0073647 13144 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.389 38.967 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 2913 223 791 223 485 564 564 1 AASGTKEDPNLVPSISNK Unmodified 1826.9374 0.93740633 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 1 6 0 1 54.484 54.484 4 1.6119E-05 17477 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.188 45.147 98.926 0 144.99 110.3 126.64 124.31 93 0 139 111 130 120 1 0 1 1 1 1 8519.6 224 1417 224 486 565 565 1 AASIFGGAKPVDTAAR Unmodified 1530.8154 0.8154407 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 10 1 1 1 54.389 54.389 3 0.00010965 15179 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.181 73.343 177.89 171.03 253.77 198.01 0 200.41 168 176 253 195 0 188 1 1 1 1 0 1 27010 225 2377 225 487;488 566;567 566 2 AASPAKPSSLDLVPNLPR Unmodified 1832.0156 0.01559707 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 1 8 0 1 63.635 63.635 3 1.6993E-06 20283 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.051 59.987 39.215 96.308 0 81.197 41.388 87.297 37 93 0 75 46 83 1 1 0 1 1 1 8205.7 226 894 226 489 568 568 1 AASPSPAR Unmodified 755.3926 0.3926016 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 0 4.5 0.5 1 1 23.272 23.272 2 0.028315 3680 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.324 17.422 39.634 13.236 0 0 13.962 19.856 37 14 0 0 14 19 2 1 0 0 1 1 2135.2 227 2320 227 490;491 569;570 570 2 AASQPGELK Unmodified 899.47125 0.47124585 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 8 3.56 1 1 1 40.369 40.369 2;3 0.0032985 11307 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.897 30.17 108.62 110.02 45.609 79.36 165.08 173.31 102 111 46 74 167 167 2 2 1 2 3 3 8010.9 228 1868 228 492;493;494 571;572;573;574 572 4 AASQPGELKDWFVGR Unmodified 1659.8369 0.83690442 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 1 8 0 1 66.958 66.958 3 0.0024669 21917 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.723 46.569 0 0 133.81 153.79 0 0 0 0 130 148 0 0 0 0 1 1 0 0 8672.4 229 1868 229 495 575 575 1 AASSSQVSEMK Acetyl (Protein N-term) 1165.5285 0.52850274 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 1 0 0 0 13 0 1 47.083 47.083 2 2.993E-16 14889 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.087 75.648 69.109 63.615 52.964 77.725 0 88.478 65 65 56 74 0 83 1 1 1 1 0 1 6764.5 230 817 230 496 576 576 1 AASSYSAK Unmodified 783.37628 0.37628284 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 7 0 1 34.848 34.848 2 0.025299 7488 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.109 41.031 19.932 48.065 35.813 27.766 37.427 0 19 47 37 28 37 0 1 1 1 1 1 0 1372.7 231 3383 231 497 577 577 1 AASTASHRPIK Acetyl (Protein N-term) 1179.636 0.63601977 766 D3Z3A0;Q9DCL8 Ppp1r2 Protein phosphatase inhibitor 2 yes no 1 0 0 1 5 0 1 29.003 29.003 3 0.0018386 5989 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.004 24.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 232 766 232 498 578 578 1 AASTDIAGLEESFR Acetyl (Protein N-term) 1507.7155 0.71545188 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 1 0 0 0 2.5 0.5 1 1 79.446 79.446 2 1.1331E-40 28087 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.77 106.8 9.5851 20.634 0 0 15.172 3.0219 9 20 0 0 15 3 1 2 0 0 2 1 27937 233 2963 233 499;500 579;580;581 580 3 AASVDLELK Acetyl (Protein N-term) 986.52843 0.52842638 2927 Q9CQF7;Q9CWM4 Pfdn1 Prefoldin subunit 1 yes no 1 0 0 0 4 0 1 70.69 70.69 2 0.046528 25630 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.245 33.795 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 234 2927 235 501 582 582 1 AASVPALADLVK Unmodified 1153.6707 0.67067394 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 7.5 0.5 1 1 74.652 74.652 3 0.00034978 25436 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.515 49.273 79.43 35.549 145.48 53.631 0 127.92 75 37 139 57 0 120 2 1 2 2 0 2 4695.2 235 2343 237 502;503 583;584 584 2 AASVQPATASK Unmodified 1029.5455 0.54547343 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6.5 0.5 1 1 38.397 38.397 2;3 0.0013881 9173 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.898 57.749 68.989 63.28 102.45 84.525 62.786 97.346 65 65 102 84 65 93 1 1 2 2 1 2 6258.7 236 3285 238 504;505 585;586 586 2 AATAAVPGAAAGR Acetyl (Protein N-term) 1124.5938 0.5938206 2550 Q8CHW4 Eif2b5 Translation initiation factor eIF-2B subunit epsilon yes yes 1 0 0 0 2.5 0.5 1 1 44.246 44.246 2 0.00013395 13642 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.349 47.581 0 0 35.706 0 0 39.442 0 0 33 0 0 37 0 0 2 0 0 2 7667.6 237 2550 239 506;507 587;588 587 2 AATAPLLEAVDNLSAFASNPEFSSVPAQISPEGR Unmodified 3455.7209 0.7208782 1450 P26039 Tln1 Talin-1 yes yes 0 0 0 0 7 0 1 103.66 103.66 4 0.061301 37131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 18.139 7.0348 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 585.36 238 1450 240 508 589 589 1 AATEGYK Unmodified 738.35482 0.35481911 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 8 3.56 1 1 1 36.522 36.522 2 0.011124 9584 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.65 77.579 298.8 299.02 383.56 280.13 465.91 312.9 282 306 384 278 468 306 3 3 3 2 3 3 45058 239 2487 241 509;510;511 590;591;592 592 3 AATFFGCIGIDK Unmodified 1298.6329 0.63290823 1626 P55264;A0A286YCD7;A0A286YCN3 Adk Adenosine kinase yes no 0 0 0 0 7.5 3.84 1 2 1 77.159 77.159 2;3 8.1497E-08 26021 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.15 61.269 79.353 59.27 27.041 29.961 8.0377 99.138 74 56 28 28 9 93 2 2 2 1 1 2 10985 240 1626 242 512;513;514;515 593;594;595;596 595 4 AATFFGEVVK Acetyl (Protein N-term) 1109.5757 0.57571092 785 D6RG59;D3Z795;Q9JK23 Psmg1 Proteasome assembly chaperone 1 yes no 1 0 0 0 6 0 1 87.287 87.287 2 0.0079669 32707 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.198 18.686 39.58 0 20.358 0 0 0 37 0 19 0 0 0 1 0 1 0 0 0 1274 241 785 243 516 597 597 1 AATGEEVPR Unmodified 928.46141 0.46140945 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 4.6 4.32 1 1 1 1 1 32.776 32.776 2 0.00080644 8663 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.49 58.773 113.63 75.044 134.4 123.85 95.678 155.04 107 75 134 121 102 148 3 2 3 2 2 2 39899 242 2543 244 517;518;519;520;521 598;599;600;601;602 600 5 AATGEEVSAEDLGGADLHCR Unmodified 2056.912 0.91199621 1993 Q3ULD5 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 49.859 49.859 3 2.4442E-22 16075 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 125.51 109.21 40.239 38.616 57.248 18.494 27.77 19.462 38 38 56 19 28 19 2 1 2 1 1 1 8526.6 243 1993 245 522;523 603;604 603 2 AATGPFDR Unmodified 833.40317 0.40316629 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 0 6 0 1 39.95 39.95 2 0.051866 10720 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.88 22.677 108.87 0 96.839 72.69 128.7 114.65 102 0 93 74 130 111 1 0 1 1 1 1 5854.7 244 3232 246 524 605 605 1 AATGPFDREHLLMYLEK Unmodified 1989.9982 0.99823245 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 1 8 0 1 71.492 71.492 4 9.9273E-05 23968 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.335 46.496 0 0 0 0 45.451 77.587 0 0 0 0 46 74 0 0 0 0 1 1 4088.4 245 3232 247 525 606 606 1 AATIIATSEGSLWGLDR Unmodified 1759.9105 0.9104633 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 13 0 1 80.312 80.312 3 5.1599E-06 31025 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.203 73.777 59.555 54.847 43.131 68.474 0 78.884 56 56 46 65 0 74 1 1 1 1 0 1 9141 246 68 248 526 607 607 1 AATITATSPGALWGLDR Unmodified 1699.8893 0.88933392 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 10 2.16 1 1 1 73.756 73.756 3 6.5369E-18 24387 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.77 102.07 167.99 139.56 141.42 75.817 132.5 39.442 158 139 139 74 130 37 3 2 2 1 2 1 44656 247 1495 249 527;528;529 608;609;610 609 3 AATIVIQSYLR Unmodified 1233.7081 0.70812208 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 11.5 0.5 1 1 69.914 69.914 2 1.334E-13 17714 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.54 115.19 0 33.666 22.866 0 0 0 0 32 23 0 0 0 0 1 1 0 0 0 24237 248 728 250 530;531 611;612 612 2 AATSAPAASAAAASAAVAAEYK Unmodified 1919.9589 0.95887005 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 6 0 1 66.283 66.283 3 0.0035054 23018 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.367 21.879 0 39.368 0 0 18.867 29.31 0 37 0 0 19 28 0 1 0 0 1 1 3313.4 249 1036 251 532 613 613 1 AATSPALFNR Unmodified 1046.5509 0.55089316 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 48.692 48.692 2 0.0051971 13981 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.1 32.976 126.9 156.54 227.62 57.208 228.31 67.491 120 158 222 56 223 65 1 1 2 1 2 1 18241 250 3204 252 533;534;535 614;615;616 614 3 AATTIQK Unmodified 731.41775 0.41775372 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 7.5 0.5 1 1 38.853 38.853 2 0.02751 9556 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.352 36.801 87.933 147.88 218.83 51.973 48.116 69.29 83 148 213 56 46 65 1 2 2 1 1 1 123650 251 728 254 536;537 617;618 617 2 AAVAAGCR Unmodified 774.38066 0.38065671 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 6.5 0.5 1 1 27.218 27.218 2 0.001234 4368 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.61 99.589 83.561 26.473 0 24.625 27.342 102.62 78 28 0 23 28 97 2 1 0 1 1 2 7640.8 252 2904 255 538;539 619;620 620 2 AAVAGEDGR Unmodified 844.40389 0.40389457 3389 Q9Z204;A0A2I3BRM6;A0A2I3BQH3 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 5.5 4.39 1 1 1 1 27.541 27.541 2 0.00026607 5966 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.47 87.574 208.08 175.58 83.251 166.25 126.01 200.01 195 177 88 158 129 191 4 4 2 4 2 5 92467 253 3389 256 540;541;542;543 621;622;623;624;625;626 621 6 AAVAGENAR Unmodified 857.43553 0.43552905 275 A0A1D5RLK6;A0A1D5RMF0;A0A1D5RLM5;Q8BTF8 Ralyl RNA-binding Raly-like protein yes no 0 0 0 0 4 0 1 26.695 26.695 2 0.010724 5368 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.486 30.717 0 23 0 0 0 0 0 23 0 0 0 0 0 1 0 0 0 0 1755.1 254 275 257 544 627 627 1 AAVAIQSQFR Unmodified 1089.5931 0.59309232 715 D3YXH0;P63054 Igsf5;Pcp4 Purkinje cell protein 4 yes no 0 0 0 0 8.57 3.33 1 1 2 1 1 1 51.229 51.229 2 3.61E-15 12118 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 171.99 125.42 275.8 442.78 187.9 347.82 570.43 531.65 259 436 186 329 570 514 3 6 3 5 4 6 158760 255 715 258 545;546;547;548;549;550;551 628;629;630;631;632;633;634;635 633 8 AAVASLLQSVQVPEFTPK Unmodified 1884.0357 0.03566381 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 8.43 4.78 2 1 2 1 1 88.777 88.777 2;3;4 3.9371E-19 28433 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.45 102.02 59.647 62.838 64.828 57.712 80.824 77.633 56 65 65 56 83 74 1 3 2 1 2 2 242750 256 1876 259 552;553;554;555;556;557;558 636;637;638;639;640;641;642 640 7 AAVAWEAGKPLSIEEIEVAPPK Unmodified 2304.2365 0.23654846 1474 P28474;A0A0G2JGS3 Adh5 Alcohol dehydrogenase class-3 yes no 0 0 0 1 6.67 0.471 1 2 76.653 76.653 3;4;5 5.9568E-16 26953 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.132 77.127 80.058 0 70.029 30.604 75.428 107.65 75 0 65 28 74 103 2 0 1 2 1 3 14655 257 1474 260 559;560;561 643;644;645 644 3 AAVEEGIVLGGGCALLR Unmodified 1683.8978 0.89779012 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 74.499 74.499 2;3 4.218E-38 28034 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 153.95 117.63 148.75 54.248 20.358 80.882 75.449 176.94 139 56 19 74 75 168 4 2 1 1 2 4 32039 258 1766 261 562;563;564;565 646;647;648;649 649 4 AAVELEEPEDAR Unmodified 1327.6256 0.62557424 2778 Q91YR7 Prpf6 Pre-mRNA-processing factor 6 yes yes 0 0 0 0 2 0 1 49.302 49.302 2 6.1436E-09 15794 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.78 80.24 0 9.576 0 0 19.874 0 0 9 0 0 19 0 0 1 0 0 1 0 1561.1 259 2778 262 566 650 650 1 AAVENLPTFLVELSR Unmodified 1657.9039 0.90392136 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 9 2.35 1 2 1 90.442 90.442 2;3 6.972E-05 35774 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.776 52.302 59.793 39.368 58.622 20.608 8.4674 20.254 56 37 55 19 9 19 2 1 2 1 1 1 15530 260 1798 263 567;568;569;570 651;652;653;654 654 4 AAVESDTEFWDK Unmodified 1396.6147 0.61467521 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 4 0 1 65.699 65.699 2 1.5305E-07 23444 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.7 82.183 0 0 48.538 27.711 0 0 0 0 46 28 0 0 0 0 1 1 0 0 1562.4 261 721 264 571 655 655 1 AAVESLGFILFR Unmodified 1321.7394 0.73942221 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 11.5 0.5 1 1 90.416 90.416 2 0.00092735 25712 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.655 41.18 0 19 21.958 39.967 0 0 0 19 23 37 0 0 0 1 2 1 0 0 16444 262 1943 265 572;573 656;657;658 658 3 AAVEWFDGKDFQGSK Unmodified 1683.7893 0.78928553 2063 Q5SUT0;Q5SUS9;Q61545 Ewsr1 RNA-binding protein EWS yes no 0 0 0 1 7 0 1 68.038 68.038 3 0.062771 23036 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.033 12.668 29.828 0 36.328 79.81 0 0 28 0 37 75 0 0 1 0 1 1 0 0 2942.5 263 2063 266 574 659 659 1 AAVGSPGSLESAPR Acetyl (Protein N-term) 1339.6732 0.67319314 286 A0A1L1SQ28;Q9JMA2 Qtrt1 Queuine tRNA-ribosyltransferase yes no 1 0 0 0 2 0 1 51.95 51.95 2 0.0033956 17027 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 43.306 32.44 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 3479.1 264 286 267 575 660 660 1 AAVHLEGK Unmodified 823.4552 0.45520186 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 7 0 1 39.443 39.443 3 0.021626 9642 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.716 29.288 0 78.736 0 0 162.39 83.844 0 74 0 0 158 83 0 1 0 0 1 1 3587.7 265 2182 268 576 661 661 1 AAVHYDR Unmodified 830.4035 0.40350064 1159 O08583 Alyref THO complex subunit 4 yes yes 0 0 0 0 4 0 1 25.735 25.735 3 0.0076487 4973 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.469 39.926 34.273 12.585 0 15.302 0 20.254 32 14 0 14 0 19 1 1 0 1 0 1 1984.6 266 1159 269 577 662 662 1 AAVLFQQVK Unmodified 1002.5862 0.58621603 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 10.5 0.5 1 1 63.759 63.759 2 7.4089E-07 17166 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 160.91 101.71 0 0 0 33 0 229 0 0 0 33 0 229 0 0 0 1 0 1 45782 267 2790 270 578;579 663;664 664 2 AAVLVQQWVSYADTELIPAACGATLPALGLR Unmodified 3253.7169 0.71691921 3383 Q9Z1Q9;G3UY93;G3UZ22 Vars Valine--tRNA ligase yes no 0 0 0 0 11 0 1 112.25 112.25 4 0.00054276 36177 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.062 27.212 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 1934 268 3383 271 580 665 665 1 AAVMATLLFPGQEFK Unmodified 1621.8538 0.85380004 3354 Q9WVQ5 Apip Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 0 6.5 5.5 1 1 89.851 89.851 3 5.3006E-05 25561 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.566 54.128 39.468 46.283 14.765 8.5906 19.479 0 37 46 14 9 19 0 1 1 1 1 1 0 10545 269 3354 272 581;582 666;667 667 2 AAVMVHQLSK Unmodified 1082.5906 0.59064948 1878 Q02248;E9Q6A9;F6QZ47 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 10 0 1 47.846 47.846 3 0.022644 10821 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.598 6.5798 398.45 284.27 418.47 355.2 360.76 441.69 375 299 419 354 375 424 1 1 1 1 1 1 12712 270 1878 273 583 668 668 1 AAVPDAVGK Unmodified 826.45487 0.45486751 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 7.75 3.11 1 1 1 1 47.158 47.158 2 8.957E-06 14656 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.63 85.598 1718.1 1332.7 1715.6 1715.7 1610.3 2265.1 1617 1382 1718 1691 1684 2168 7 6 6 7 6 7 639860 271 106;2253;2699 274 584;585;586;587 669;670;671;672;673;674;675 669 7 AAVPSGASTGIYEALELR Unmodified 1803.9367 0.93667805 1398;1399 P17182;B0QZL1;B1ARR7;A0A0N4SUI6;B1ARR6;Q5SX59;Q5SX61;Q5SX60;P17183;A0A0N4SUX5;D3Z6E4;D3Z2S4;D3YVD3 Eno1;Eno3;Eno2 Alpha-enolase;Enolase;Gamma-enolase no no 0 0 0 0 7.2 2.14 1 4 2 2 1 82.978 82.978 2;3 8.4383E-71 27925 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 196.78 169.75 567.62 550.9 592.25 681.91 900.38 638.14 534 557 579 662 910 617 10 8 8 9 13 9 1069300 272 1398;1399 275 588;589;590;591;592;593;594;595;596;597 676;677;678;679;680;681;682;683;684;685;686;687;688;689;690;691 690 16 AAVPSIK Unmodified 684.41703 0.41702544 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 10 1.87 1 1 1 1 49.086 49.086 2 0.01082 13461 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.29 58.578 1005.2 1671.9 1840.4 2032.6 2151.2 2193.2 947 1664 1872 1997 2209 2115 3 4 3 4 3 4 383330 273 1334 276 598;599;600;601 692;693;694;695 692 4 AAVPTPAK Unmodified 753.43849 0.43848916 1333 P09405;A0A087WRM5 Ncl Nucleolin yes no 0 0 0 0 7.5 0.5 1 1 43.336 43.336 2 0.017306 11438 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.229 50.044 20.024 57.607 37.469 67.464 71.666 76.839 19 56 37 65 74 74 1 2 1 2 2 2 5599.9 274 1333 277 602;603 696;697 696 2 AAVQQLQAEGLSPR Unmodified 1466.7841 0.78414057 2604 Q8K354;A0A338P797 Cbr3 Carbonyl reductase [NADPH] 3 yes no 0 0 0 0 6 0 1 54.815 54.815 3 7.0963E-05 17660 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.877 64.218 39.468 46.283 0 39.607 44.326 57.365 37 46 0 37 46 55 1 1 0 1 1 1 4459.6 275 2604 278 604 698 698 1 AAVQVLDDIEK Unmodified 1199.6398 0.63976774 1391 P16332 Mut Methylmalonyl-CoA mutase, mitochondrial yes yes 0 0 0 0 5 0 1 69.792 69.792 2 0.0051825 25289 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.595 25.407 20.044 47.298 17.619 0 0 0 19 46 19 0 0 0 1 1 1 0 0 0 2671.2 276 1391 279 605 699 699 1 AAVSGLWGK Unmodified 887.4865 0.48650199 562 A8DUK4;E9Q223 Hbbt1;Hbb-bs yes no 0 0 0 0 10.1 3.33 1 2 1 2 2 2 61.925 61.925 2;3 1.8371E-05 18959 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 148.38 75.897 8991.3 8691.5 10561 8752.5 9102.3 9076.8 8478 8888 10642 8737 9124 8736 13 10 15 15 11 12 2949400 277 562 280 606;607;608;609;610;611;612;613;614;615 700;701;702;703;704;705;706;707;708;709;710;711;712;713;714;715;716 702 17 AAVVTSPPPTTAPHK Unmodified 1472.7987 0.798728 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;D3Z0T1 Add1 Alpha-adducin yes no 0 0 0 0 7.5 0.5 1 1 43.985 43.985 3 1.2145E-05 11786 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.76 72.122 88.425 103.99 104.42 37.074 63.31 205 83 102 102 37 65 194 3 3 3 1 2 4 10949 278 3276 281 616;617 717;718;719;720 717 4 AAYADLLTPLISK Unmodified 1374.7759 0.7758673 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 10 0 1 85.709 85.709 3 0.00010151 27403 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.845 48.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10232 279 2537 282 618 721 721 1 AAYDAFNSWK Unmodified 1171.5298 0.52982336 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 9.67 2.49 1 1 1 67.633 67.633 2;3 2.59E-05 22888 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.06 67.529 236.39 249.55 94.182 186.75 58.576 99.138 222 251 93 176 56 93 3 3 1 2 1 1 40052 280 2469 283 619;620;621 722;723;724 722 3 AAYEAELGDAR Unmodified 1164.5411 0.54111633 1580 P48678;D3YUF7 Lmna Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 2.5 0.5 1 1 47.565 47.565 2 8.8384E-10 14966 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 134.51 89.788 108.47 118.47 113.53 54.441 37.054 136.46 102 120 111 56 37 129 1 2 1 1 1 2 27558 281 1580 284 622;623 725;726 725 2 AAYFGIYDTAK Unmodified 1218.5921 0.59208927 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 10 1.87 1 1 1 1 66.765 66.765 2;3 7.7338E-09 19014 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.342 65.268 265.17 319.44 443.43 272.66 162.72 277.85 250 324 440 269 158 265 2 3 3 2 1 2 64355 282 1607 285 624;625;626;627 727;728;729;730 729 4 AAYFGVYDTAK Unmodified 1204.5764 0.57643921 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 63.163 63.163 3 0.00015289 20767 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.584 67.979 403.59 107.85 426.03 373.9 271.89 457.02 379 111 417 370 278 436 5 2 5 5 3 5 68691 283 1585 286 628;629;630;631 731;732;733;734;735 731 5 AAYGGGGR Unmodified 707.33509 0.33508672 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 6 0 1 23.687 23.687 2 0.005805 3633 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.69 64.642 0 15.425 31.999 13.858 33.496 41.684 0 15 31 15 34 40 0 1 1 1 1 1 5635.3 284 974 287 632 736 736 1 AAYIYIR Unmodified 868.48069 0.48068833 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 11.5 1.5 1 1 53.733 53.733 2 0.027201 13287 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.513 57.661 336.05 414.16 156.47 98.895 451.36 522.25 316 413 158 102 453 502 2 2 1 1 2 2 45890 285 680 288 633;634 737;738 737 2 AAYNLVR Unmodified 805.44464 0.44463717 2931 Q9CQI6;A0A1D5RLP1 Cotl1 Coactosin-like protein yes no 0 0 0 0 8 1 1 1 44.594 44.594 2 0.017895 10556 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.903 39.364 324.98 285.52 321.93 245.75 384.03 367.47 306 294 325 249 390 355 1 1 1 1 1 1 29716 286 2931 289 635;636 739;740 740 2 AAYQVAALPR Unmodified 1058.5873 0.58727866 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 8 0.816 1 1 1 51.771 51.771 2 4.4502E-05 13894 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.73 90.989 350.21 289.87 405.74 177.49 407.71 378.52 330 301 400 181 410 366 3 3 3 2 3 3 44431 287 1611 290 637;638;639 741;742;743 743 3 AAYVLFYQR Unmodified 1129.592 0.59202969 2673;57 A0A0A6YW28;P35123;Q8R5H1 Usp4;Usp15 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 4;Ubiquitin carboxyl-terminal hydrolase 15 no no 0 0 0 0 6 5 1 1 66.115 66.115 2 0.00066845 18266 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.57 92.565 119.1 0 0 0 106.69 0 111 0 0 0 102 0 1 0 0 0 1 0 11788 288 57;2673 291 640;641 744;745 745 2 ACADATLSQITNNIDPVGR Deamidation (N) 2015.9582 0.95821812 1750 P62874;H3BKR2;H3BLF7 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 1 0 0 4 0.816 1 1 1 68.588 68.588 3 1.6437E-07 23467 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.482 65.404 29.737 76.254 28.508 9.4714 19.439 29.848 28 74 28 9 19 28 1 2 1 1 1 1 19103 289 1750 292 642;643;644 746;747;748 747 681;682 3 ACADATLSQITNNIDPVGR Unmodified 2014.9742 0.97420254 1750 P62874;H3BKR2;H3BLF7 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 0 7.2 2.99 2 1 1 1 71.391 71.391 3 1.8149E-19 27132 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.96 104.43 69.32 134.61 148.91 124.39 157.96 233.21 65 130 148 121 158 223 2 4 4 4 3 5 102080 290 1750 292 645;646;647;648;649 749;750;751;752;753 753 5 ACAELHQNVNVK Unmodified 1381.6772 0.67723266 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 6 0 1 41.51 41.51 3 3.4585E-05 11404 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.403 66.177 49.074 56.275 0 61.208 0 0 46 56 0 56 0 0 1 1 0 1 0 0 5928.6 291 3174 293 650 754 754 1 ACAETIDPASLWEY Unmodified 1624.7079 0.70792366 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 0 6.4 3.38 2 1 1 1 90.123 90.123 2;3 4.0236E-22 35714 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.92 127.77 41.095 38.006 20.483 8.9582 60.819 37.849 39 37 19 9 60 37 3 1 1 1 3 2 23391 292 2131 294 651;652;653;654;655 755;756;757;758;759 759 5 ACALSIAESCRPGDK Unmodified 1633.7552 0.75522498 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 1 6 0 1 50.852 50.852 3 0.0012699 15765 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.52 30.678 0 77.312 85.167 0 58.576 0 0 74 83 0 56 0 0 1 1 0 1 0 4366.2 293 2597 295 656 760 760 1 ACDEGHIIPK Unmodified 1138.5441 0.54409322 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 43.695 43.695 3 0.00099291 12855 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.465 48.723 98.723 70.078 119.7 162.57 101.08 59.696 93 74 120 157 102 56 1 1 1 2 1 1 13130 294 3202 296 657;658 761;762 762 2 ACDELTDILPEQEQQGLQEAVR Unmodified 2541.2017 0.20169587 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 3 0 1 75.013 75.013 3 1.7004E-07 28234 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.032 43.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 295 305 297 659 763 763 1 ACEEQGAALR Unmodified 1103.503 0.50295669 953 E9QK48 Eml2 yes yes 0 0 0 0 2 0 1 33.426 33.426 2 0.012587 8690 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 40.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 296 953 298 660 764 764 1 ACFHCETCK Unmodified 1211.4522 0.45218344 2140 Q61792 Lasp1 LIM and SH3 domain protein 1 yes yes 0 0 0 0 7 0 1 36.009 36.009 3 0.0030316 8037 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.563 43.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 297 2140 299 661 765 765 1 ACGDSTLTQITAGLDPVGR Unmodified 1930.9418 0.94183978 1751 P62880;E9QKR0;D3Z1M1;D3Z1T4 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 0 8 3.56 1 1 1 73.864 73.864 3 6.3523E-09 26665 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.155 48.892 69.069 72.014 123.52 36.999 129.32 144.48 65 74 120 37 130 139 1 2 2 1 2 2 38625 298 1751 300 662;663;664 766;767;768 767 3 ACGLNFADLMGR Unmodified 1323.6064 0.6063759 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 8 0 1 74.629 74.629 2 0.0011021 25488 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.672 42.542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 299 2162 301 665 769 769 1 ACGVDYEVK Unmodified 1039.4644 0.46444592 1145 J3QNU6;Q8BWG8 Arrb1 Beta-arrestin-1 yes no 0 0 0 0 5 0 1 48.91 48.91 3 0.00060807 15443 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.062 42.249 78.873 53.537 43.587 57.799 43.124 68.059 74 56 46 56 46 65 1 1 1 1 1 1 2247.8 300 1145 302 666 770 770 1 ACGVLETIR Unmodified 1017.5277 0.52771487 728 D3YZ62;D3Z4J3;Q99104;E9Q1F5;G5E8G6;G3X9Y9;P21271 Myo5a;Myo5c;Myo5b Unconventional myosin-Va;Unconventional myosin-Vb yes no 0 0 0 0 7 0 1 53.201 53.201 2 0.04972 16043 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.014 18.292 197.08 183.21 83.835 69.166 183.37 202.64 185 186 83 65 185 195 2 2 1 1 2 2 4639.5 301 728 303 667 771;772 772 2 ACGVSRPVIACSVTIK Unmodified 1716.9015 0.90149529 3034 Q9D0T1 Nhp2l1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 1 9 0 1 53.437 53.437 3 0.061097 14716 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.583 21.184 0 0 70.33 0 84.521 66.878 0 0 65 0 83 65 0 0 1 0 1 1 3087.3 302 3034 304 668 773 773 1 ACLLAAALGTTGER Unmodified 1402.7238 0.7238485 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 10.5 0.5 1 1 71.487 71.487 3 0.00011237 21206 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.498 62.202 39.344 26.513 37.459 17.643 47.373 28.496 37 28 37 19 47 28 1 1 1 1 1 1 9995.6 303 2438 305 669;670 774;775 774 2 ACLYAGVK Unmodified 880.44767 0.44767364 1383 P15105;D3YVK1 Glul Glutamine synthetase yes no 0 0 0 0 9.12 3.44 1 1 2 1 1 1 1 52.487 52.487 2;3 0.0010837 12571 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.87 98.803 2305.4 1474.5 1255.7 1437.4 2118.2 1585 2162 1541 1269 1410 2137 1522 6 4 3 7 8 5 541160 304 1383 306 671;672;673;674;675;676;677;678 776;777;778;779;780;781;782;783;784 780 9 ACNCLLLK Unmodified 990.49906 0.49905728 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase no no 0 0 0 0 9.6 1.85 2 1 1 1 57.526 57.526 2;3 0.0012277 17462 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.24 61.468 492.51 597.45 623.91 630.01 708.24 552.49 463 593 624 614 720 533 4 5 5 4 4 5 275390 305 1399 307 679;680;681;682;683 785;786;787;788;789;790;791 787 7 ACNQLGQFLQHR Unmodified 1470.715 0.71501515 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 10.5 2.5 1 1 52.578 52.578 3 2.0847E-27 15261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 175.49 141.1 401.64 295.83 414.49 380.06 504.41 276.66 378 310 417 379 508 269 2 2 2 2 2 1 67058 306 1400;1401 308 684;685 792;793 792 2 ACQLGSWPTDDLTGCDLIPVQYLR Unmodified 2777.3153 0.31528584 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 6 0 1 91.306 91.306 3 0.029651 34539 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 29.855 26.393 6.3023 8.8958 15.269 8.8756 2.7303 0 6 9 15 9 3 0 1 1 1 1 1 0 926.37 307 2012 309 686 794 794 1 ACTALYYLSQLSPGK Unmodified 1670.8338 0.83379288 781 D3Z6I4;Q921W4;D3YU21;D3YZD6;A0A338P785;F7BGV1 Cryzl1 Quinone oxidoreductase-like protein 1 yes no 0 0 0 0 9 4.64 1 1 2 82.662 82.662 3;4 2.1055E-05 29110 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.36 82.945 34.22 48.585 37.967 33.228 65.688 82.894 32 47 37 32 66 79 2 3 2 3 3 3 22415 308 781 310 687;688;689;690 795;796;797;798 795 4 ACTTEEDQEK Unmodified 1209.4819 0.48194647 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 2 0 1 33.185 33.185 2 0.0012756 8569 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.658 46.497 20.212 0 29.347 19.018 0 20.254 19 0 28 19 0 19 1 0 1 1 0 1 2495.7 309 1925 311 691 799 799 1 ACVDTALENLSTLK Deamidation (N) 1534.7549 0.75487386 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 0 6 0 1 76.873 76.873 3 0.0039106 28036 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.155 24.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 310 1412 312 692 800 800 512 1 ACVDTALENLSTLK Unmodified 1533.7709 0.77085827 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7 0 1 77.014 77.014 3 2.2844E-05 27285 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.633 48.405 39.474 0 38.135 38.168 0 29.848 37 0 37 37 0 28 1 0 1 1 0 1 5851.4 311 1412 312 693 801 801 1 ACVIHGTDLK Unmodified 1112.5648 0.56482866 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8 0 1 44.989 44.989 3 0.065329 11492 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.525 8.7826 336.62 279.92 355.2 403.83 474.49 445.91 317 290 362 397 486 431 1 1 1 1 1 1 13678 312 106 313 694 802 802 1 ACVVHGSDLK Unmodified 1084.5335 0.53352853 2253;2699 Q6PIE5;D3YYN7;Q8VDN2 Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 8 2.58 1 1 1 1 1 1 39.891 39.891 3 2.0036E-07 10748 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 121.83 81.772 305.02 394.04 602.17 393.32 606.49 484.55 287 392 596 396 613 466 3 3 4 3 4 2 54677 313 2253;2699 314 695;696;697;698;699;700 803;804;805;806;807;808 804 6 ADAASQVLLGSGLTILSQPLMYVK Acetyl (Protein N-term) 2516.356 0.35601167 2278 Q791V5;A2AFW6;Q9D050;D6RCZ1 Mtch2 Mitochondrial carrier homolog 2 yes no 1 0 0 0 13 0 1 121.32 121.32 3 8.5049E-23 45433 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.178 31.924 0 0 0 6.558 0 6.396 0 0 0 6 0 6 0 0 0 1 0 1 2223.1 314 2278 315 701 809 809 1 ADAEEEAATR Unmodified 1061.4625 0.46253166 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 13 0 1 30.864 30.864 2 7.7016E-05 7026 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.98 59.513 0 0 40.034 0 56.948 47.411 0 0 37 0 56 46 0 0 1 0 1 1 4797 315 539 316 702 810 810 1 ADAEENLEDVMEEVR Unmodified 1747.7571 0.7570587 2501 Q8C561 Lmbrd2 LMBR1 domain-containing protein 2 yes yes 0 0 0 0 1.5 0.5 1 1 75.362 75.362 3 1.619E-05 27210 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.632 61.799 15.022 9.5384 2.2488 9.5381 28.475 10.913 14 9 3 9 28 11 1 1 1 1 2 2 822.19 316 2501 317 703;704 811;812;813 812 3 ADAEVLR Unmodified 772.40792 0.40791731 1577 P48036;A0A0G2JGQ0 Anxa5 Annexin A5 yes no 0 0 0 0 3 0 1 40.214 40.214 2 0.026936 12166 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.142 20.744 68.95 32.952 105.68 53.017 100.62 105.86 65 37 102 56 102 102 1 1 1 1 1 1 22677 317 1577 318 705 814 814 1 ADAFVGTWK Acetyl (Protein N-term) 1035.5025 0.50254598 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 1 0 0 0 6 0 1 79.65 79.65 2 0.0012168 29350 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.999 43.675 108.14 108.68 127.31 141.1 172.37 152.85 102 111 130 139 176 148 1 1 1 1 1 1 35367 318 1352 319 706 815 815 1 ADAGGEDAILQTR Unmodified 1315.6368 0.63680763 2902 Q9CPX6 Atg3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 0 3 0 1 49.388 49.388 2 0.001807 16368 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.463 46.957 39.701 0 0 30.604 0 49.036 37 0 0 28 0 46 1 0 0 1 0 1 6469.1 319 2902 320 707 816 816 1 ADALQAGASQFETSAAK Unmodified 1664.8006 0.8005785 564;1763 P63024;B0QZN5;P63044 Vamp3;Vamp2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 no no 0 0 0 0 7.17 2.73 2 1 2 1 62.301 62.301 2;3;4 4.0721E-39 21130 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 157.84 130.5 512.27 673.11 758.26 619.2 747.26 257.59 481 677 766 605 742 250 5 8 8 4 7 3 256740 320 1763;564 321 708;709;710;711;712;713 817;818;819;820;821;822;823;824 820 8 ADAVHLFSGSQFESSR Unmodified 1736.8118 0.81181188 685 Q9R1V6;D3YUP9 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 7 0 1 59.718 59.718 3 0.00044965 19126 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.98 37.423 29.856 37.355 0 60.57 33.903 58.729 28 37 0 56 37 56 1 1 0 1 1 1 4818 321 685 322 714 825 825 1 ADAVQDSEMVELVELEIR Unmodified 2044.9987 0.99868596 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 90.569 90.569 3 4.5264E-35 31966 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 143.71 127.58 8.5054 9.2174 20.143 8.958 0 11.726 8 9 19 9 0 11 2 1 2 1 0 2 1862.7 322 2361 323 715;716 826;827;828 826 3 ADCASGIFLAAEK Unmodified 1351.6442 0.6442012 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 6 0 1 67.61 67.61 3 9.3742E-09 23620 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.101 60.771 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 323 1436 324 717 829 829 1 ADCKEEHDIPR Unmodified 1368.6092 0.60921267 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 1 3 0 1 35.346 35.346 4 0.014797 9853 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.354 26.099 0 67.586 94.148 54.395 63.87 47.213 0 65 93 56 65 46 0 1 1 1 1 1 4710.2 324 2743 325 718 830 830 1 ADCLVPSEIR Unmodified 1158.5703 0.57030797 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 8 3.56 1 1 1 56.229 56.229 2 1.9085E-07 19130 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.83 88.432 255.51 369.65 406.57 210.86 213.61 409.64 241 370 399 204 213 390 3 4 3 2 2 4 77709 325 410;3398 326 719;720;721 831;832;833;834 831 4 ADCLVPSEIRK Unmodified 1286.6653 0.66527099 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 1 6 0 1 53.624 53.624 3 0.0019538 17011 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.721 46.603 78.029 80.331 162.66 69.241 103.51 0 74 83 158 74 102 0 1 1 1 1 1 0 6501.2 326 410;3398 327 722 835 835 1 ADCSNIDK Unmodified 921.3862 0.38619559 798 E0CXA9;Q6PEB6;E0CYJ0 Mob4 MOB-like protein phocein yes no 0 0 0 0 8.5 4.5 1 1 38.089 38.089 2 0.011128 10625 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.692 35.342 69.343 0 67.488 55.955 65.42 0 65 0 65 56 65 0 1 0 1 1 1 0 4831 327 798 328 723;724 836;837 836 2 ADCYTELEK Acetyl (Protein N-term) 1169.4911 0.4910546 760 D3Z2Y6;Q9D708 S100a16 yes no 1 0 0 0 2 0 1 60.633 60.633 2 0.0014015 21018 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.265 49.747 59.677 24.966 47.973 0 48.116 0 56 28 46 0 46 0 1 1 1 0 1 0 4792.6 328 760 329 725 838 838 1 ADDADEFGYSR Unmodified 1244.4946 0.49456007 2276 Q78PY7 Snd1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 0 1 0 1 46.789 46.789 2 9.9014E-09 13866 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.46 89.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 329 2276 330 726 839 839 1 ADDDDVVVK Unmodified 974.45566 0.45565537 287 E9PUM4;A0A1L1SQ51;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 yes no 0 0 0 0 2.5 0.5 1 1 47.993 47.993 2 8.205E-08 15689 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.96 95.668 59.76 65.13 0 70.004 55.36 0 56 65 0 65 56 0 1 1 0 1 1 0 4791.1 330 287 331 727;728 840;841 841 2 ADDGRPFPQVIK Unmodified 1341.7041 0.70409934 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 7.44 2.36 2 2 1 2 1 1 53.934 53.934 3;4 9.716E-12 17825 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.69 88.461 4185.1 4109.9 4743.4 3786.4 4734.2 5095.9 3945 4190 4776 3786 4845 4899 9 10 10 9 9 9 1132100 331 1309 332 729;730;731;732;733;734;735;736;737 842;843;844;845;846;847;848;849;850;851;852 852 11 ADDLDFETGDAGASATFPMQCSALR Acetyl (Protein N-term) 2687.1479 0.14794574 51 A0A0A0MQM0;P63242 Eif5a Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 1 0 0 0 2 0 1 86.189 86.189 3 2.0786E-12 29011 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.958 46.034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3976.9 332 51 333 738 853 853 1 ADDLEPIVELGR Unmodified 1325.6827 0.68269519 1804 P70236;A2AGS2 Map2k6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 0 3 0 1 71.347 71.347 2 0.016419 26497 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.259 18.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 333 1804 334 739 854 854 1 ADDLLPLGDQTQDGDFGSR Unmodified 2018.9181 0.91812745 3404 Q9Z315 Sart1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 0 3 0 1 72.19 72.19 3 0.0068987 26905 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.915 23.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 334 3404 335 740 855 855 1 ADDNATIR Unmodified 874.41446 0.41445926 3374 Q9Z1D1 Eif3g Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 0 1 0 1 29.694 29.694 2 0.021524 6618 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.269 35.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 335 3374 336 741 856 856 1 ADDPSSYMEVVQAANASGNWEELVK Unmodified 2709.2228 0.22282525 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7 3.16 1 1 1 1 1 90.249 90.249 3;4 6.8191E-23 34465 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.365 74.111 34.055 122.36 28.694 62.956 123.11 131.42 32 117 28 59 122 124 3 5 2 4 5 4 60588 336 2185 337 742;743;744;745;746 857;858;859;860;861;862;863 859 7 ADDPSSYMEVVQAANASGNWEELVK Deamidation (N) 2710.2068 0.20684083 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 7.33 4.03 1 1 1 90.736 90.736 3;4 5.1997E-08 35375 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.147 49.154 5 0 3.157 1.9978 0 0 5 0 3 2 0 0 1 0 1 1 0 0 1764.6 337 2185 337 747;748;749 864;865;866 866 856;857 3 ADDPTMGEGPDK Unmodified 1231.5027 0.50268192 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 4.4 4.36 1 1 2 1 44.93 44.93 2;3 2.1005E-18 13652 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.07 116.54 257.03 128.3 333.52 157.93 286.66 290.34 241 130 316 149 287 279 3 3 4 3 4 4 151870 338 1160 338 750;751;752;753;754 867;868;869;870;871;872 872 6 ADDPTMGEGPDK Oxidation (M) 1247.4976 0.49759654 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 1 0 2 0 1 39.601 39.601 3 0.0009571 11673 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.997 35.499 99.003 40.635 97.689 0 84.542 96.726 93 46 93 0 84 93 1 1 1 0 1 1 11886 339 1160 338 755 873 873 57 1 ADDTFEALR Unmodified 1036.4825 0.48253882 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 54.055 54.055 2 0.0002539 18246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 129.72 82.727 453.31 162.31 499.85 216.68 370.44 484.05 426 167 482 213 370 464 4 2 4 2 3 4 62985 340 1749 339 756;757;758;759 874;875;876;877 875 4 ADDVDQQQTTNTVEEPLDLIR Acetyl (Protein N-term) 2441.1558 0.15579154 1721 P62311 Lsm3 U6 snRNA-associated Sm-like protein LSm3 yes yes 1 0 0 0 1.5 0.5 1 1 82.407 82.407 2;3 1.1183E-42 28958 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.55 84.019 0 5.32 0 0 2.092 0 0 5 0 0 2 0 0 1 0 0 1 0 4165.6 341 1721 340 760;761 878;879 878 2 ADDYEQVK Unmodified 966.42944 0.42944062 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 4.83 3.72 1 2 2 1 44.049 44.049 2;3 0.0027938 13835 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.41 83.165 723.71 764.22 1084.9 644.74 539.06 511.55 681 773 1075 639 535 484 6 6 7 4 4 4 230600 342 1606 341 762;763;764;765;766;767 880;881;882;883;884;885;886 882 7 ADEACAPDTESK Unmodified 1292.5191 0.51906026 2498 Q91WG7;Q8C413;F2Z409 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 0 2 0 1 38.834 38.834 3 0.0096281 11273 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.915 32.649 29.856 57.105 27.837 48.829 46.919 0 28 56 28 47 47 0 1 2 1 2 2 0 6248.9 343 2498 342 768 887;888 887 2 ADEAYLIGR Unmodified 1006.5084 0.50835964 974 G5E8R3;E9QPD7;Q05920;A0A286YCC5 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 4 0 1 53.845 53.845 2 0.038272 18084 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.433 34.877 0 0 68.711 36.346 0 49.036 0 0 65 37 0 46 0 0 1 1 0 1 4223.3 344 974 343 769 889 889 1 ADECDTHTGACLGCR Unmodified 1721.6556 0.65558729 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 2 0 1 33.552 33.552 3 0.019939 8752 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 39.629 39.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 345 2123 344 770 890 890 1 ADEDEEIIVK Unmodified 1159.5608 0.56084872 2491 Q8C1Y8 Ccz1 Vacuolar fusion protein CCZ1 homolog yes yes 0 0 0 0 2 0 1 56.896 56.896 3 0.0026163 19279 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.65 34.535 0 0 0 30.256 18.484 0 0 0 0 28 19 0 0 0 0 1 1 0 1691.8 346 2491 345 771 891 891 1 ADEDPIMGFHQMFLLK Unmodified 1890.9008 0.90082659 1705 P61971 Nutf2 Nuclear transport factor 2 yes yes 0 0 0 0 8 0 1 83.616 83.616 3 0.0053899 29753 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.958 23.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 347 1705 346 772 892 892 1 ADEELEALRK Acetyl (Protein N-term) 1214.6143 0.61428128 1645 P56812 Pdcd5 Programmed cell death protein 5 yes yes 1 0 0 1 2.5 0.5 1 1 58.619 58.619 2 8.0309E-07 20603 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.628 48.328 138.62 46.934 106.56 123.31 79.807 155.49 130 46 102 120 83 148 2 1 1 2 1 2 22742 348 1645 347 773;774 893;894 894 2 ADEGISFR Unmodified 893.4243 0.42429566 604 B1AXW5;B1AXW6;P35700 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 9 4 1 1 47.235 47.235 2 0.011846 14770 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.783 38.103 713.92 638.72 729.14 713.39 845.53 223.04 671 657 742 707 847 213 1 2 2 2 2 1 79741 349 604 348 775;776 895;896 895 2 ADETKDEQFEEYVQNFK Unmodified 2118.9382 0.93819419 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 1 8.17 3.48 2 1 1 2 71.937 71.937 3;4 0.00014348 26732 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.645 35.845 452.94 272.7 578.97 637.21 432.28 611.44 426 278 577 622 453 584 6 5 6 7 6 6 104040 350 90 349 777;778;779;780;781;782 897;898;899;900;901;902;903 902 7 ADETKDEQFEQCVQNFNK Unmodified 2228.9644 0.96442571 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 1 4.75 0.829 2 1 1 61.67 61.67 3;4 6.1021E-19 21775 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 131.72 110.35 294.67 400.14 270.7 130.3 133.1 351.18 278 399 269 130 139 333 4 4 2 2 2 4 36263 351 1157;2210 350 783;784;785;786 904;905;906;907 905 4 ADEVAPAK Unmodified 799.40758 0.40758296 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 5 0 1 40.181 40.181 2 0.012161 11227 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.296 39.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 352 2020 351 787 908 908 1 ADEVTLSEAGSTAGPAEPR Unmodified 1856.8752 0.8752 3360 Q9Z0P4;A0A1W2P831 Palm Paralemmin-1 no no 0 0 0 0 2.5 0.957 1 2 2 1 52.131 52.131 2;3 1.6789E-35 17192 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 150.29 118.86 49.129 58.043 96.541 46.657 101.84 148.21 46 55 93 47 102 140 2 4 4 2 4 4 125650 353 3360 352 788;789;790;791;792;793 909;910;911;912;913;914;915 911 7 ADFCIIHYAGK Unmodified 1293.6176 0.61759251 1974;2696 Q8VDD5;Q3UH59;Q61879;Q5SV64 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 7 0 1 61.979 61.979 3 0.00073029 20345 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.979 34.973 0 38.618 44.847 58.535 0 78.884 0 37 46 56 0 74 0 1 1 1 0 1 115070 354 2696;1974 353 794 916 916 1 ADFPAGIPECGTDALR Unmodified 1688.7828 0.78281994 3383 Q9Z1Q9;G3UY93;G3UZX1 Vars Valine--tRNA ligase yes no 0 0 0 0 4 0 1 66.256 66.256 3 0.056447 23704 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.974 10.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 355 3383 354 795 917 917 1 ADFQLRPVPSGFAPR Unmodified 1656.8736 0.87362428 3058 Q9D3A9;A0A0U1RPY1;D6RG66 Ttyh1 Protein tweety homolog 1;Protein tweety homolog yes no 0 0 0 1 8.5 0.5 1 1 61.354 61.354 3 6.8109E-05 19282 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.2 81.562 256.74 187.63 152.02 208.05 311.41 248.02 241 195 148 204 315 241 2 2 1 2 2 2 24189 356 3058 355 796;797 918;919 918 2 ADFSEAYK Unmodified 929.41306 0.41306227 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 7.2 2.99 2 1 1 1 52.738 52.738 2;3 0.0052258 16649 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.28 62.825 691.81 746.76 656.46 477.4 1029.7 1056.3 651 756 671 482 1037 1017 3 4 4 3 4 4 254290 357 1390 356 798;799;800;801;802 920;921;922;923;924 922 5 ADFVCSTAQK Unmodified 1125.5125 0.51245874 2596 Q8K298 Anln Actin-binding protein anillin yes yes 0 0 0 0 6 0 1 50.693 50.693 3 0.026753 15686 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.512 25.352 0 108.53 0 40.441 0 69.29 0 102 0 37 0 65 0 1 0 1 0 1 3399.8 358 2596 357 803 925 925 1 ADFVLAANSYDLAIK Unmodified 1609.8352 0.83517309 1196 O35465 Fkbp8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 0 7 0 1 82.729 82.729 3 0.0089871 30019 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.317 18.063 39.464 0 39.835 0 48.116 0 37 0 37 0 46 0 1 0 1 0 1 0 1585 359 1196 358 804 926 926 1 ADGELNVDSLITR Acetyl (Protein N-term) 1443.7205 0.72053726 1711 P62141;A0A0J9YUG2 Ppp1cb Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 1 0 0 0 3 0.816 1 1 1 78.64 78.64 2 3.4972E-19 27905 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.4 80.002 53.831 73.644 87.438 69.313 105.55 31.833 51 74 88 70 105 31 3 3 3 3 3 1 40142 360 1711 359 805;806;807 927;928;929 927 3 ADGIFLNPWVEDR Unmodified 1530.7467 0.74669243 3446 yes yes 0 0 0 0 8 0 1 78.283 78.283 2 0.006419 27199 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.908 11.113 9.657 0 0 9.837 0 14.924 9 0 0 9 0 14 1 0 0 1 0 1 7146.4 + 361 3446 360 808 930 930 1 ADGIVSK Unmodified 688.37555 0.37555455 2938 Q9CQR2 Rps21 40S ribosomal protein S21 yes yes 0 0 0 0 13 0 1 44.25 44.25 2 0.022568 13521 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.265 19.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 362 2938 361 809 931 931 1 ADGLGGQADLMAER Unmodified 1402.6511 0.65107749 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 13 0 1 54.734 54.734 2 0.059954 18610 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.495 8.609 138.68 0 135.87 91.724 97.156 155 130 0 130 93 102 148 1 0 1 1 1 1 8237.1 363 2370 362 810 932 932 1 ADGPPASHDGGDR Unmodified 1250.5276 0.52759153 2405 Q8BHL3 Tbc1d10b TBC1 domain family member 10B yes yes 0 0 0 0 1.5 0.5 1 1 21.766 21.766 3 2.4161E-05 3458 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.38 84.013 44.757 51.102 8.6389 4.6881 13.93 34.781 42 51 9 5 14 33 3 3 1 1 1 2 5642.5 364 2405 363 811;812 933;934;935 934 3 ADGSDLISADAEQR Unmodified 1446.6587 0.65866529 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 2 0 1 49.425 49.425 2 0.031659 15890 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.73 29.294 20.171 7.7188 29.731 0 0 0 19 9 28 0 0 0 1 1 1 0 0 0 1980.2 365 721 364 813 936 936 1 ADGSTQVIDTK Unmodified 1133.5564 0.55643205 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 6.75 3.63 1 2 1 45.609 45.609 2;3 1.1279E-13 13892 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 153.95 100.78 376.6 265.7 585.19 528.87 460.38 474.02 354 280 575 530 472 457 2 3 3 4 2 2 87405 366 1164 365 814;815;816;817 937;938;939;940;941 938 5 ADGVKPQTNSTK Deamidation (N) 1245.6201 0.62009493 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 1 0 1 6 0 1 39.083 39.083 3 0.052264 10242 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.31 28.469 48.749 55.371 55.37 37.141 0 59.696 46 56 56 37 0 56 1 1 1 1 0 1 2727.5 367 1475 366 818 942 942 543 1 ADGVKPQTNSTK Unmodified 1244.6361 0.63607935 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 1 10 3 1 1 36.336 36.336 3 6.324E-06 8323 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.76 43.133 83.716 157.19 251.9 99.083 112.48 219.58 79 157 246 97 111 209 1 2 2 1 1 2 13251 368 1475 366 819;820 943;944 943 2 ADGYVLEGK Unmodified 950.47091 0.4709115 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 5.5 0.5 1 1 54.247 54.247 2 0.0037687 17328 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.08 37.084 0 184.51 164.49 115.29 114.23 154.51 0 176 167 111 112 148 0 2 2 1 1 2 8906.2 369 1714 367 821;822 945;946 946 2 ADHGEPIGR Unmodified 950.45699 0.45699277 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 6 4.97 1 1 1 25.167 25.167 2;3 0.00012581 5000 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.33 92.158 231.35 283 277.78 302.07 327.58 351.22 218 285 283 297 332 338 3 4 3 4 3 3 105860 370 1354 368 823;824;825 947;948;949;950;951 947 5 ADHQPLTEASYVNLPTIALCNTDSPLR Unmodified 2995.4709 0.47093486 1374 P14206;A0A1L1SRW0 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 6 0 1 76.472 76.472 3 6.0297E-05 27842 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.612 33.283 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 4175.7 371 1374 369 826 952 952 1 ADIAIAPLTITLVR Unmodified 1465.8868 0.88681473 1104 G5E8H1 Gria2 no no 0 0 0 0 10 2.16 1 1 1 85.775 85.775 3 4.8558E-05 29929 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.588 50.929 9.447 28.838 18.967 8.7066 29.288 0 9 28 19 9 28 0 1 2 1 1 1 0 6210.8 372 1104 370 827;828;829 953;954;955 954 3 ADIAVAPLTITLVR Unmodified 1451.8712 0.87116466 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 9 0 1 81.903 81.903 3 0.004312 28255 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.188 40.906 49.273 16.894 0 30.604 0 0 46 19 0 28 0 0 1 1 0 1 0 0 4162.4 373 565 371 830 956 956 1 ADIAVPLVFTK Unmodified 1172.6805 0.68051035 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 9.8 1.72 1 2 1 1 80.118 80.118 2;3 4.9746E-05 30817 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.522 37.322 158.01 20.216 194.1 181.96 216.96 225.24 148 19 186 176 213 213 2 1 3 3 3 3 84634 374 2295 372 831;832;833;834;835 957;958;959;960;961;962 962 6 ADIGVAMGIVGSDVSK Unmodified 1517.7759 0.77594365 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 8 0 1 76.074 76.074 3 0.0017405 26157 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.537 25.194 0 0 110.36 0 65.015 86.623 0 0 102 0 65 83 0 0 1 0 1 1 3864.3 375 2699 374 836 963 963 1 ADIKAPEDK Unmodified 985.50803 0.50802529 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;A2AKV0;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 1 6 0 1 43.029 43.029 3 0.026396 12028 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.492 19.77 156.95 143.73 189.21 107.5 135.19 183.76 148 148 188 111 140 176 1 1 1 1 1 1 11381 376 484;2493 375 837 964 964 1 ADILEDKDGK Unmodified 1102.5506 0.55061839 3020 Q9D0E1;B8JK33;B8JK32;F6W322 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 1 5 0 1 53.98 53.98 3 0.047105 17805 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.5 26.125 0 77.509 73.426 44.718 62.959 86.681 0 74 74 46 65 83 0 1 1 1 1 1 6382.4 377 3020 376 838 965 965 1 ADISGNITK Unmodified 917.48181 0.48181054 753 Q9JL62;D3Z1H9;D3Z1H8 Gltp Glycolipid transfer protein yes no 0 0 0 0 13 0 1 48.406 48.406 2 0.019251 15539 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.719 11.311 118.75 70.729 0 88.134 137.42 114.4 111 74 0 83 139 111 1 1 0 1 1 1 4839 378 753 377 839 966 966 1 ADIVENQVMDTR Oxidation (M) 1405.6507 0.65074314 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 1 0 3 0 1 50.008 50.008 3 0.031843 16663 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.825 33.249 0 29.5 17.471 29.563 0 29.848 0 28 19 28 0 28 0 1 1 1 0 1 3776 379 1347 378 840 967 967 75 1 ADIVENQVMDTR Unmodified 1389.6558 0.65582851 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 6.67 4.5 1 1 1 57.137 57.137 2;3 3.5211E-18 19602 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.09 119.52 237.06 122.78 268.79 64.846 269.74 251.9 223 129 259 65 269 241 3 2 3 1 3 2 67305 380 1347 378 841;842;843 968;969;970 970 3 ADIWALGCLLYK Unmodified 1421.7377 0.73770765 1983 Q3UHJ0;Q91Z96 Aak1;Bmp2k AP2-associated protein kinase 1;BMP-2-inducible protein kinase yes no 0 0 0 0 13 0 1 94.602 94.602 3 0.00022097 37819 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.555 47.704 78.923 42.883 44.192 58.574 0 69.29 74 46 46 56 0 65 1 1 1 1 0 1 5046.2 381 1983 379 844 971 971 1 ADIWSFGITAIELATGAAPYHK Unmodified 2331.1899 0.18993262 2228 Q6P9R2 Oxsr1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 0 11 0 1 106.57 106.57 4 0.030925 35094 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.19 21.545 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1359.3 382 2228 380 845 972 972 1 ADIWSLGITAIELAK Unmodified 1599.8872 0.88720866 2842 Q99KH8;A2AD84;Q99JT2;D3Z359;Q9Z2W1 Stk24;Stk26;Stk25 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 35 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 25 yes no 0 0 0 0 10.7 1.7 1 1 1 104.02 104.02 3 1.2031E-07 33395 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.74 72.953 5.3185 9.2174 29.961 16.108 73.533 56.522 5 9 28 17 74 54 1 1 1 2 3 3 8486 383 2842 381 846;847;848 973;974;975;976 975 4 ADKDYHFK Unmodified 1022.4821 0.48214489 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 1 13 0 1 41.142 41.142 4 0.05838 12018 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.198 18.799 147.84 0 219.5 180.91 204.41 202.04 139 0 211 181 210 195 1 0 1 1 1 1 12206 384 2056 382 849 977 977 1 ADKEAAFDDAVEER Acetyl (Protein N-term) 1606.7111 0.71109479 2100 Q60972 Rbbp4 Histone-binding protein RBBP4 yes yes 1 0 0 1 1.5 0.5 1 1 58.963 58.963 2;3 2.1041E-05 19005 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.232 40.85 108.35 99.541 100.57 73.54 71.688 68.07 102 102 102 74 74 65 2 2 2 2 2 1 22408 385 2100 383 850;851 978;979 978 2 ADKEAGGGDAGPR Acetyl (Protein N-term) 1241.5636 0.56364269 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 1 0 0 1 1 0 1 31.126 31.126 2 0.00066398 7415 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.6 13.451 0 29.792 0 50.278 0 39.442 0 28 0 46 0 37 0 1 0 1 0 1 94628 386 2585 384 852 980 980 1 ADKLAEEHGS Unmodified 1055.4884 0.48835248 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 5 0 1 36.739 36.739 2 0.0084643 9574 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.378 56.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 387 1642 385 853 981 981 1 ADLAAIYHER Unmodified 1157.5829 0.58292157 2380 Q8BGN3;D3YU63;A0A1B0GS66 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 0 0 0 5 0 1 50.085 50.085 3 0.0035208 15966 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.255 16.575 0 29.315 28.537 0 0 0 0 28 28 0 0 0 0 1 1 0 0 0 2405.4 388 2380 386 854 982 982 1 ADLAAVEAK Unmodified 886.476 0.47599688 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 6 0 1 54.16 54.16 2 0.0064441 17325 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.231 12.334 176.01 232.35 157.36 312.55 143.18 272.01 166 232 158 297 148 259 2 2 1 2 1 2 7122.7 389 3204 387 855 983;984 984 2 ADLAEEYSK Unmodified 1024.4713 0.47130543 412 A0A338P786;P68037;A0A338P7E5 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 0 4 0.707 1 2 1 52.791 52.791 2;3 0.0016065 17908 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.677 35.801 48.523 121.67 186.32 0 253.58 230.48 46 121 176 0 250 223 1 3 2 0 3 3 23351 390 412 388 856;857;858;859 985;986;987;988 985 4 ADLALIDTPDAESIAESR Unmodified 1885.9269 0.92690122 618 D3YUX2;B2RQR2;Q8VBX6 Mpdz Multiple PDZ domain protein yes no 0 0 0 0 3 0 1 73.366 73.366 3 0.00011373 27516 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.288 35.455 9.657 0 0 0 19.874 0 9 0 0 0 19 0 1 0 0 0 1 0 1800.1 391 618 389 860 989 989 1 ADLDHQR Unmodified 853.40423 0.40422892 254 A0A1B0GRT5;P62071 Rras2 Ras-related protein R-Ras2 yes no 0 0 0 0 3 0 1 24.065 24.065 3 0.027944 4597 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.205 12.138 20.242 18.709 8.5135 0 19.874 0 19 19 9 0 19 0 1 1 1 0 1 0 3482.4 392 254 390 861 990 990 1 ADLEAQR Unmodified 801.39808 0.39808091 2729 Q91V41;Q50HX3;A0A2R8VHW9 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 7.5 5.5 1 1 33.335 33.335 2 0.016141 8102 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.046 12.912 69.329 0 69.98 0 94.662 76.183 65 0 65 0 93 74 1 0 1 0 1 1 14696 393 2729 391 862;863 991;992 992 2 ADLEEQLSDEEK Acetyl (Protein N-term) 1446.6362 0.63619851 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 1 0 0 0 13 0 1 69.019 69.019 2 1.8951E-14 25492 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.89 83.07 69.57 34.677 0 49.249 54.683 47.476 65 37 0 46 56 46 1 1 0 1 1 1 20180 394 1564 392 864 993 993 1 ADLEEQLSDEEKVR Acetyl (Protein N-term) 1701.8057 0.80572345 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 1 0 0 1 1 0 1 63.268 63.268 2 2.4753E-07 21141 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.288 59.468 0 0 38.334 38.156 0 39.442 0 0 37 37 0 37 0 0 1 1 0 1 9551.7 395 1564 393 865 994 994 1 ADLEMQIESLTEELAYLK Oxidation (M) 2111.0344 0.03440276 659 CON__P13645 yes yes 0 0 1 0 6 0 1 108.61 108.61 3 2.3194E-09 38007 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.33 84.176 5.34 4.9599 0 0 0 0 5 5 0 0 0 0 1 1 0 0 0 0 1350.5 + 396 659 394 866 995 995 37 1 ADLEMQIESLTEELAYLK Unmodified 2095.0395 0.039488138 659 CON__P13645 yes yes 0 0 0 0 6 0 1 109.2 109.2 3 4.0876E-07 38045 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.307 75.622 2.1139 0 5.3993 0 0 5.33 2 0 5 0 0 5 1 0 1 0 0 1 831.9 + 397 659 394 867 996 996 1 ADLEPESFRPNLSDPSELLLPDQIEK Unmodified 2951.4764 0.4763974 2028 Q4KMM3;E9Q0A7;A0A2R8VHT3;B1H3M0;A0A2R8VHF5 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 5 1 1 1 83.214 83.214 4;5 1.3875E-07 31486 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.922 48.073 0 0 67.344 67.031 0 0 0 0 65 65 0 0 0 0 2 2 0 0 11210 398 2028 395 868;869 997;998 997 2 ADLIAYLK Unmodified 905.52222 0.52221879 1753 P62897 Cycs Cytochrome c, somatic yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 77.775 77.775 2;3 0.002594 23938 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.616 44.59 1835 1805.4 2278.7 1924.9 2819.5 2811.2 1730 1827 2259 1907 2854 2707 7 7 6 6 7 7 408010 399 1753 396 870;871;872;873;874 999;1000;1001;1002;1003;1004;1005;1006;1007 1004 9 ADLINNLGTIAK Deamidation (N) 1242.682 0.68196691 1322;1354 P07901;B7ZC50;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 1 0 0 7.57 2.38 1 1 3 1 1 74.122 74.122 3 1.0784E-05 24131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.39 56.133 148.72 185.57 178.18 207.22 213.47 251.6 140 186 177 195 214 241 4 5 5 4 5 6 53718 400 1322;1354 397 875;876;877;878;879;880;881 1008;1009;1010;1011;1012;1013;1014 1010 389;390 7 ADLINNLGTIAK Unmodified 1241.698 0.69795133 1322;1354 P07901;B7ZC50;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 10.2 1.72 1 1 1 1 1 73.241 73.241 3 9.4464E-13 22046 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.84 78.58 557.23 738.46 465.38 1199.6 966.37 1253.3 522 712 458 1128 986 1199 4 4 4 4 5 5 437290 401 1322;1354 397 882;883;884;885;886 1015;1016;1017;1018;1019;1020;1021 1019 7 ADLPDQR Unmodified 813.39808 0.39808091 2885 Q99P58 Rab27b Ras-related protein Rab-27B yes yes 0 0 0 0 3 0 1 35.785 35.785 2 0.037575 10035 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.229 32.381 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 5456.9 402 2885 398 887 1022 1022 1 ADLSIPDLHEIVTEELEER Unmodified 2207.0958 0.095757464 442 A2ACC7;F8WHN4;A2ACC6;E9Q0J2;Q8BQZ4 Ralgapb Ral GTPase-activating protein subunit beta yes no 0 0 0 0 4 0 1 86.195 86.195 3 0.014164 32759 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.649 22.673 0 0 9.738 0 19.874 0 0 0 9 0 19 0 0 0 1 0 1 0 1094.2 403 442 399 888 1023;1024 1023 2 ADLSLVDALTEPPPEIEGEIK Acetyl (Protein N-term) 2277.1628 0.1627744 1464 P27546;Q78TF3 Map4 Microtubule-associated protein 4 yes no 1 0 0 0 3.67 0.471 1 2 104.27 104.27 3 2.8209E-23 34937 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.528 40.585 6.1811 6.1195 2.9905 2.1301 2.9698 2.0473 6 6 3 2 3 2 2 2 1 1 1 1 3994 404 1464 400 889;890;891 1025;1026;1027 1027 3 ADLSLVDALTEPPPEIEGEIKR Acetyl (Protein N-term) 2433.2639 0.26388542 1464 P27546;Q78TF3 Map4 Microtubule-associated protein 4 yes no 1 0 0 1 3.5 0.5 1 1 92.86 92.86 3 4.142E-28 34094 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.76 50.818 10.698 0 5.3831 8.744 11.506 15.99 10 0 5 8 11 15 2 0 1 1 1 1 6833.1 405 1464 401 892;893 1028;1029 1029 2 ADMQNLVER Acetyl (Protein N-term) 1116.5234 0.52335778 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 1 0 0 0 2 0.816 1 1 1 59.68 59.68 2 2.3364E-08 20601 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.7 93.416 29.744 27.331 36.992 47.117 63.994 48.276 28 28 37 47 64 47 1 1 2 2 2 2 52467 406 1536 402 894;895;896 1030;1031;1032 1031 3 ADMVIEAVFEDLGVK Unmodified 1634.8226 0.82255949 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 6.5 0.5 1 1 111.81 111.81 3 1.0407E-11 37747 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.34 81.787 9.657 0 0 9.767 3.7202 6.2898 9 0 0 9 4 6 2 0 0 2 1 1 2056 407 2435 403 897;898 1033;1034 1034 2 ADNFEYSDPVDGSISK Unmodified 1742.7635 0.76352429 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 6.67 4.5 1 1 1 63.796 63.796 3 1.7871E-06 22675 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.16 86.578 228.69 108.74 65.084 206.67 156.44 184.22 214 111 65 195 158 177 3 2 1 2 2 3 37862 408 3022 404 899;900;901 1035;1036;1037 1036 3 ADNPVLELLLR Acetyl (Protein N-term) 1293.7293 0.72925145 839 Q8C0C7;E9PWY9;D6RIJ2 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 1 0 0 0 6 0.816 1 1 1 108.24 108.24 2 4.2499E-10 37558 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.55 78.374 6.438 0 0 6.558 0 3.198 6 0 0 6 0 3 2 0 0 2 0 1 2506.3 409 839 405 902;903;904 1038;1039;1040;1041 1041 4 ADPAECNIK Acetyl (Protein N-term) 1058.4703 0.47025958 2139 Q61768;E9QAK5 Kif5b Kinesin-1 heavy chain;Kinesin-like protein yes no 1 0 0 0 2.5 0.5 1 1 49.095 49.095 2 0.0016393 15664 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.789 58.793 29.749 27.346 26.335 48.708 0 58.63 28 28 28 46 0 55 1 1 1 1 0 1 4015 410 2139 406 905;906 1042;1043 1042 2 ADPEAAWEPTEAEAR Unmodified 1641.7271 0.7270792 3375 Q9Z1F9;H3BLR3 Uba2 SUMO-activating enzyme subunit 2 yes no 0 0 0 0 1.5 0.5 1 1 55.297 55.297 2 0.0040252 18721 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.471 38.899 0 0 20.558 0 0 20.254 0 0 19 0 0 19 0 0 1 0 0 1 1684.7 411 3375 407 907;908 1044;1045 1045 2 ADPLGLEAEKDGVPVFK Unmodified 1783.9356 0.93561541 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 1 7 0 1 73.227 73.227 3 0.013957 25432 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.382 16.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 412 2633 408 909 1046 1046 1 ADPQEAINCLNAAIDIYTDMGR Unmodified 2450.1206 0.12060878 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 13 0 1 97.482 97.482 3 2.8245E-11 39234 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.99 64.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 413 1478 409 910 1047 1047 1 ADPSELAAPELEDPPR Unmodified 1705.8159 0.81589421 2970 Q9CTY5 Micu3 Calcium uptake protein 3, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 62.208 62.208 3 0.0038649 22201 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.657 29.304 20.207 0 30.194 0 27.631 48.248 19 0 28 0 28 46 1 0 1 0 1 1 8221.2 414 2970 410 911;912 1048;1049 1049 2 ADPSIVQALSLYDGLV Unmodified 1659.872 0.87195253 2439 Q8BNY6 Ncs1 Neuronal calcium sensor 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 107.83 107.83 2;3 6.5133E-05 43898 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.72 76.871 6.3653 1.9168 27.586 6.2594 8.9681 9.3381 6 2 27 6 9 9 2 1 4 2 2 3 6891.1 415 2439 411 913;914;915;916 1050;1051;1052;1053;1054 1054 5 ADPTVQLAPSPPK Unmodified 1319.7085 0.70851601 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6 0 1 56.182 56.182 3 0.064543 18312 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.3 14.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 416 3285 412 917 1055 1055 1 ADPVSLR Unmodified 756.413 0.41300269 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4 0 1 42.173 42.173 2 0.060955 12567 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.637 27.755 99.431 0 60.091 0 0 0 93 0 56 0 0 0 1 0 1 0 0 0 4574.2 417 1999 413 918 1056 1056 1 ADPWQECMDYAVILAR Acetyl (Protein N-term) 1978.8917 0.89171846 2819 Q924B0;O55023;Q80ZJ2;A0A0A6YW07 Impa1 Inositol monophosphatase 1 yes no 1 0 0 0 4 0 1 96.311 96.311 2 3.1792E-05 34432 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.441 72.55 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 595.45 418 2819 414 919 1057 1057 1 ADQAEPEK Unmodified 886.40323 0.40322587 2084 Q60738 Slc30a1 Zinc transporter 1 yes yes 0 0 0 0 2 0 1 34.383 34.383 3 0.037541 9171 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.198 29.724 29.807 46.934 0 0 0 0 28 46 0 0 0 0 1 1 0 0 0 0 1116.7 419 2084 415 920 1058 1058 1 ADQCYEDVR Unmodified 1154.4662 0.46623683 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57;G3UX53;D3YXM2 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 4.75 4.82 1 1 1 1 37.53 37.53 2 0.00064443 10024 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.1 62.198 168.03 135.64 166.79 152.5 142.85 258.13 158 139 167 148 148 250 3 2 3 3 3 5 142990 420 1289 416 921;922;923;924 1059;1060;1061;1062;1063;1064 1064 6 ADQELLMYSHDNIICGITSVAFSR Unmodified 2739.2996 0.29963578 1751 P62880;E9QKR0;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 87.459 87.459 3;4 1.0027E-18 32187 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.17 93.441 40.454 27.611 67.815 38.985 46.044 43.974 38 28 66 37 47 42 2 2 3 1 2 2 16558 421 1751 417 925;926;927;928;929 1065;1066;1067;1068;1069 1066 5 ADQELLMYSHDNIICGITSVAFSR Deamidation (N) 2740.2837 0.28365136 1751 P62880;E9QKR0;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 1 0 0 7 0 1 87.676 87.676 4 7.97E-10 32198 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.753 52.878 20.265 0 20.456 0 0 29.848 19 0 19 0 0 28 1 0 1 0 0 1 2934.8 422 1751 417 930 1070 1070 686 1 ADQELMTYSHDNIICGITSVSFSK Unmodified 2715.252 0.25201688 1750 P62874 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 0 0 0 0 7.17 3.34 1 1 1 1 1 1 80.449 80.449 3;4 6.7826E-16 28251 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.551 72.821 198.18 128.43 158.87 223.14 78.928 175.77 186 130 157 212 83 167 4 3 3 4 1 2 32179 423 1750 418 931;932;933;934;935;936 1071;1072;1073;1074;1075;1076;1077 1074 7 ADQGLDFAATK Unmodified 1135.551 0.55095274 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 5.5 0.5 1 1 58.467 58.467 3 0.00034865 19266 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.881 44.193 39.516 36.703 0 30.604 0 39.442 37 37 0 28 0 37 1 1 0 1 0 1 19542 424 1424 419 937;938 1078;1079 1079 2 ADQIETQQLMR Unmodified 1331.6503 0.65034921 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 4 0 1 52.184 52.184 2 0.0033329 17320 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.896 42.938 0 0 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 5851.6 425 3271;3353 420 939 1080 1080 1 ADQLADESLESTR Unmodified 1433.6634 0.66341631 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 4 4.08 1 2 2 1 51.686 51.686 2;3 4.9413E-23 16972 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 164.56 104.76 217.12 152.93 167.74 249.52 264.99 345.97 204 157 167 242 269 334 4 3 2 5 4 7 122240 426 1681 421 940;941;942;943;944;945 1081;1082;1083;1084;1085;1086;1087 1084 7 ADQLADESLESTRR Unmodified 1589.7645 0.76452734 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 1 2 0 1 45.773 45.773 3 0.018518 14214 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.54 29.402 39.29 26.361 46.775 27.326 26.045 57.887 37 28 46 28 28 55 1 1 1 1 1 1 10880 427 1681 422 946 1088 1088 1 ADQLTEEQIAEFK Acetyl (Protein N-term) 1562.7464 0.74641766 1340 P0DP28;P0DP27;P0DP26;Q9D6P8 Calml3 Calmodulin-like protein 3 yes no 1 0 0 0 3.83 3.13 2 3 2 2 1 1 1 78.245 78.245 2;3 6.9008E-162 29802 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.47 78.539 2577.1 2083.2 3218.6 2098.6 2878.3 2890.1 2429 2167 3185 2100 2936 2786 13 10 13 7 12 11 5356600 428 1340 423 947;948;949;950;951;952;953;954;955;956;957;958 1089;1090;1091;1092;1093;1094;1095;1096;1097;1098;1099;1100;1101;1102;1103;1104 1097 16 ADQWNVNYVETSAK Unmodified 1623.7529 0.75290002 1784 P63321 Rala Ras-related protein Ral-A yes yes 0 0 0 0 5.5 0.5 1 1 62.689 62.689 3 0.00011987 21339 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.541 67.983 97.805 34.022 124.35 111.74 115.41 144.88 92 37 120 111 120 139 2 1 1 2 2 2 16389 429 1784 424 959;960 1105;1106 1106 2 ADRDESSPYAAMLAAQDVAQR Unmodified 2264.0492 0.049158397 1716 P62264;D3YVF4;D3Z7I1 Rps14 40S ribosomal protein S14 yes no 0 0 0 1 4 0 1 61.59 61.59 3 3.6232E-05 21709 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.033 37.612 0 9.576 0 20.767 0 0 0 9 0 19 0 0 0 1 0 1 0 0 2241.1 430 1716 425 961 1107 1107 1 ADRDQYELLCLDNTR Unmodified 1880.8687 0.86867484 2797 Q921I1;E9Q035 Tf;Gm20425 Serotransferrin yes no 0 0 0 1 4 0 1 57.858 57.858 3 5.033E-07 19985 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.32 93.629 59.864 0 37.592 48.038 0 0 56 0 37 46 0 0 1 0 1 1 0 0 9190.6 431 2797 426 962 1108 1108 1 ADRDTIR Unmodified 845.43553 0.43552905 869 F7BX42;E9PZM8;Q99J85 Nptxr Neuronal pentraxin receptor yes no 0 0 0 1 3 0 1 22.694 22.694 3 0.016653 4057 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.355 35.197 168.32 114.53 107.76 103.77 68.971 106.76 158 120 111 102 74 102 1 1 1 1 1 1 10831 432 869 427 963 1109 1109 1 ADRENADIIR Unmodified 1171.5945 0.59454889 2823 Q925I1;H3BK90;V9GWS6 Atad3;Atad3a ATPase family AAA domain-containing protein 3 yes no 0 0 0 1 3 0 1 34.532 34.532 3 0.0083424 9449 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.435 26.429 29.756 0 48.387 27.72 0 49.036 28 0 46 28 0 46 1 0 1 1 0 1 1334.8 433 2823 428 964 1110 1110 1 ADSASPSPR Unmodified 886.41446 0.41445926 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 24.681 24.681 2 0.001896 4521 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.431 60.861 49.026 75.43 37.909 78.303 54.058 67.747 46 74 37 74 56 65 2 3 1 3 2 2 20160 434 1999 429 965;966;967;968 1111;1112;1113;1114 1113 4 ADSHGELDLAR Unmodified 1182.5629 0.56291441 1240 O55137;A0A1Y7VMZ4;Q91YQ6;Q6Q2Z6;Q9QYR7;Q32Q92;Q8BWN8 Acot1;Acot5;Acot3;Acot6;Acot4 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 5;Acyl-coenzyme A thioesterase 3;Acyl-coenzyme A thioesterase 6;Acyl-coenzyme A thioesterase 4 yes no 0 0 0 0 2 0 1 39.441 39.441 3 0.0024038 11605 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.57 31.057 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 3851.7 435 1240 430 969 1115 1115 1 ADSVCDGHAAGQK Unmodified 1314.5623 0.56226248 1019 F7BNZ5;Q80YN3 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 4.5 0.5 1 1 32.499 32.499 3 4.9118E-12 8011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.95 102.65 0 58.52 0 69.864 100.18 96.279 0 55 0 65 102 93 0 2 0 1 2 2 8065.9 436 1019 431 970;971 1116;1117 1116 2 ADTDTSCR Unmodified 924.36071 0.36070913 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 1 0 1 21.482 21.482 2 0.00011176 3332 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 159.46 122.48 0 48.486 27.387 0 57.461 32.472 0 46 28 0 56 32 0 1 1 0 1 1 6473 437 281 432 972 1118 1118 1 ADTIDTIEK Unmodified 1004.5026 0.50260556 2673 Q8R5H1 Usp15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 0 4 0 1 53.64 53.64 2 0.0043471 18030 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.827 44.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 438 2673 433 973 1119 1119 1 ADTLDPALLRPGR Unmodified 1393.7678 0.76776222 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 1 6 0 1 56.404 56.404 3 0.0065265 18436 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.04 35.797 59.486 43.862 64.033 75.554 80.388 86.184 56 46 65 74 83 83 1 1 1 1 1 1 7415.2 439 237 434 974 1120 1120 1 ADTLTLEER Unmodified 1046.5244 0.52440364 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 4 0.816 1 1 1 48.963 48.963 2 0.00054162 15857 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.16 70.289 88.334 188.79 125.09 165.24 0 138.58 83 185 129 158 0 130 2 3 2 3 0 2 34147 440 431 435 975;976;977 1121;1122;1123 1122 3 ADTLTPEECQQFK Unmodified 1565.7032 0.70317264 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 4.8 0.748 2 2 1 55.994 55.994 3;4 7.1815E-14 18774 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.54 105.96 118.2 90.695 113.52 250.5 384.87 324.81 111 92 111 242 388 315 3 2 2 4 4 5 78214 441 879 436 978;979;980;981;982 1124;1125;1126;1127;1128 1126 5 ADTLTPEECQQFKK Unmodified 1693.7981 0.79813565 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 5.5 0.5 1 1 52.566 52.566 4 0.024466 16544 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.799 20.386 257.81 44.256 273.78 317.79 367.48 235.27 242 46 265 312 373 228 2 1 1 2 2 1 18179 442 879 437 983;984 1129;1130 1130 2 ADTLTPPEVDR Unmodified 1212.5986 0.59863121 1477 P28661;Q5ND13 Sept4 Septin-4 yes no 0 0 0 0 3.5 0.5 1 1 50.392 50.392 2 0.007048 16523 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.271 26.391 123.71 23.979 106.64 37.227 125.58 100.88 116 28 102 37 125 98 2 1 2 1 2 2 12685 443 1477 438 985;986 1131;1132 1132 2 ADTMTLEEK Unmodified 1036.4747 0.47467625 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 4 0 1 51.471 51.471 2 0.00010536 17079 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.84 72.405 98.602 79.454 132.14 73.006 0 128.99 93 83 130 74 0 121 1 1 1 1 0 1 11726 444 402;3384 439 987 1133 1133 1 ADVAVAPLTITLVR Unmodified 1437.8555 0.8555146 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 8 0.816 1 1 1 78.426 78.426 2;3 2.0883E-10 27261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.54 67.558 99.065 55.293 74.78 37.51 112.73 47.989 93 55 74 37 111 47 3 1 2 1 3 2 12146 445 2286 440 988;989;990 1134;1135;1136 1135 3 ADVAVESLIPGLEPPVAQR Unmodified 1960.0629 0.062941193 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 5 0 1 84.691 84.691 3 4.8948E-05 32191 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.103 36.892 0 9.0786 29.751 0 38.044 19.168 0 9 28 0 37 19 0 1 1 0 1 1 2139.9 446 1983 441 991 1137 1137 1 ADVDLYQVR Unmodified 1077.5455 0.54547343 2951 Q9CR00;A0A0G2JGN6 Psmd9 26S proteasome non-ATPase regulatory subunit 9 yes no 0 0 0 0 4 0 1 54.389 54.389 2 0.063887 18375 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.722 30.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 447 2951 442 992 1138 1138 1 ADVEDGEEPCVLSSHSGSAGSK Acetyl (Protein N-term) 2258.9597 0.95973427 764 D3Z392;Q9WTZ1 Rnf7 RING-box protein 2 yes no 1 0 0 0 1 0 1 52.658 52.658 3 1.3036E-09 16174 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.672 46.96 0 0 20.558 0 0 9.594 0 0 19 0 0 9 0 0 1 0 0 1 2778.8 448 764 443 993 1139 1139 1 ADVEIPFEEVLEK Unmodified 1516.7661 0.76609047 1644 Q3UN10;P56695 Wfs1 Wolframin yes no 0 0 0 0 4.5 0.5 1 1 86.682 86.682 3 0.0014522 33004 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.752 34.371 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 1283.2 449 1644 444 994;995 1140;1141 1140 2 ADVFHAYLSLLK Unmodified 1375.75 0.7499869 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 85.883 85.883 3 2.4755E-13 24079 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.28 68.721 87.954 169.1 155.93 79.117 19.874 118.33 83 172 152 79 19 111 1 2 2 1 1 1 51765 450 2264 445 996;997 1142;1143;1144 1144 3 ADVGFAMGIAGTDVAK Unmodified 1521.7497 0.7497289 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 6.5 0.5 1 1 73.838 73.838 3 2.6728E-08 25725 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.346 48.385 49.063 0 49.525 0 0 49.036 46 0 46 0 0 46 1 0 1 0 0 1 3149.5 451 1096;1042;487;928 446 998;999 1145;1146 1146 2 ADVPLPLDLLPSFWK Unmodified 1709.9392 0.93924423 886 E9Q2E4 Gm15800 yes yes 0 0 0 0 9 0 1 106.46 106.46 3 0.034664 37118 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 34.612 19.581 7.4814 5.8795 0 0 0 9.594 7 6 0 0 0 9 1 1 0 0 0 1 853.07 452 886 447 1000 1147 1147 1 ADVSVDQSK Acetyl (Protein N-term) 989.46655 0.46655441 2355 Q810U5 Ccdc50 Coiled-coil domain-containing protein 50 yes yes 1 0 0 0 2.5 0.5 1 1 47.105 47.105 2 0.0059841 15249 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.962 29.122 29.749 77.49 18.185 20.767 0 20.254 28 75 19 19 0 19 1 2 1 1 0 1 6083.1 453 2355 448 1001;1002 1148;1149 1149 2 ADVVESWIGEK Unmodified 1231.6085 0.60846762 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;P08032 Sptan1;Spta1 Spectrin alpha chain, non-erythrocytic 1;Spectrin alpha chain, erythrocytic 1 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 76.11 76.11 3 6.5842E-06 26089 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.95 60.671 108.48 323.77 347.44 226.88 193.96 321.51 102 316 343 223 194 305 2 6 5 5 4 6 93593 454 551 449 1003;1004;1005;1006;1007 1150;1151;1152;1153;1154;1155;1156 1155 7 ADWLTHYWMPK Unmodified 1446.6754 0.67544174 2104 Q61024 Asns Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 0 10 0 1 77.561 77.561 3 0.002418 23857 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.542 24.338 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 2096.8 455 2104 450 1008 1157 1157 1 ADWSSLSR Unmodified 920.43519 0.4351947 1418 P19783;M0QWX7;D6RG40 Cox4i1;Chka Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 0 7 0 1 51.34 51.34 2 0.013425 15198 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.251 46.226 0 124.37 198.01 221.11 110.71 135.42 0 120 199 215 120 130 0 1 1 1 1 1 25876 456 1418 451 1009 1158 1158 1 ADYAQLLEDMQNAFR Deamidation (N) 1784.8039 0.80394931 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 1 0 0 8 3.56 1 1 1 86.014 86.014 3 0.00093392 32213 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.657 43.857 78.739 44.427 73.787 96.055 63.578 0 74 46 74 93 65 0 2 1 1 2 2 0 4436.9 457 1596 452 1010;1011;1012 1159;1160;1161 1160 613 3 ADYAQLLEDMQNAFR Unmodified 1783.8199 0.81993373 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 94.797 94.797 2;3 7.4967E-22 37841 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.02 127.07 99.775 117.49 105.29 76.807 37.88 118.88 94 118 106 75 38 112 5 6 5 3 2 3 61841 458 1596 452 1013;1014;1015;1016;1017 1162;1163;1164;1165;1166;1167;1168 1168 7 ADYDREALLGVQEDVDEYVK Unmodified 2326.0965 0.096485745 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 1 3 0 1 76.93 76.93 4 5.4022E-07 29076 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.449 45.014 20.081 27.975 27.665 19.118 0 0 19 28 28 19 0 0 1 1 1 1 0 0 1550.2 459 2442 453 1018 1169 1169 1 ADYQAVDDEIEANIEEIDANEEDIDDGFRR Unmodified 3468.5077 0.50771012 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 1 1 0 1 88.483 88.483 4 0.012875 31549 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 29.617 24.297 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1280.2 460 1155 454 1019 1170 1170 1 AEACFVNCVER Unmodified 1353.5806 0.58055508 3348 Q9WVA2 Timm8a1 Mitochondrial import inner membrane translocase subunit Tim8 A yes yes 0 0 0 0 4 0 1 51.798 51.798 2 0.024477 17144 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.327 33.023 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 461 3348 455 1020 1171 1171 1 AEAEAGGDEAR Acetyl (Protein N-term) 1116.4683 0.46834532 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 1 0 0 0 13 0 1 28.395 28.395 2 0.0033362 5865 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.406 22.613 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1512.8 462 2547 456 1021 1172 1172 1 AEAEALAR Unmodified 829.42938 0.42938104 2425 Q8BL86 Mblac2 Metallo-beta-lactamase domain-containing protein 2 yes yes 0 0 0 0 3 0 1 37.392 37.392 2 0.02017 10866 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.213 29.533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 463 2425 457 1022 1173 1173 1 AEAEAQAEELSFPR Unmodified 1546.7264 0.72635092 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 5.5 4.39 1 1 1 1 58.691 58.691 3 1.8724E-18 20683 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 134.13 105.85 137.9 81.067 18.75 79.468 114.23 59.148 129 84 19 74 112 56 4 2 1 3 3 3 43924 464 974 458 1023;1024;1025;1026 1174;1175;1176;1177;1178 1176 5 AEAEGESLESWLNK Acetyl (Protein N-term) 1603.7366 0.73658126 437 A2A9W7;Q8BMI3;S4R2D2;A2A9W5 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 1 0 0 0 3.5 0.5 1 1 86.518 86.518 2 4.2433E-16 32899 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.82 45.033 0 0 20.173 8.6347 0 14.924 0 0 19 9 0 14 0 0 1 1 0 1 1416.3 465 437 459 1027;1028 1179;1180 1180 2 AEAESLYQSK Unmodified 1124.535 0.53496832 657 CON__P04264 yes yes 0 0 0 0 4.5 0.5 1 1 49.715 49.715 3 1.1205E-05 15849 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.06 67.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 466 657 460 1029;1030 1181;1182 1182 2 AEAGDNLGALVR Unmodified 1184.6149 0.61494998 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 55.121 55.121 2;3 6.7267E-08 18690 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.83 82.645 99.111 42.016 78.29 0 0 20.254 93 47 74 0 0 19 2 2 1 0 0 1 22452 467 2361 461 1031;1032 1183;1184 1183 2 AEAGEGQKPSPAQLELR Unmodified 1779.9115 0.91152593 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 6.6 3.26 1 2 1 1 49.974 49.974 3;4 5.8013E-12 15331 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.85 98.896 235.43 213.09 415.13 277.25 345.55 365.37 222 213 408 278 350 352 4 3 5 4 3 5 70351 468 2587 462 1033;1034;1035;1036;1037 1185;1186;1187;1188;1189 1188 5 AEAGGGWEGSASYK Unmodified 1368.5946 0.59460847 1856 P97765 Wbp2 WW domain-binding protein 2 yes yes 0 0 0 0 5 0 1 50.84 50.84 3 0.0014265 16353 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.599 34.726 88.094 71.093 101.88 84.647 0 118.33 83 74 102 83 0 111 1 1 1 1 0 1 5901 469 1856 463 1038 1190 1190 1 AEALASAIASTK Unmodified 1131.6136 0.61355299 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 0 9 0 1 66.169 66.169 3 0.0013877 20810 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.116 43.545 39.468 46.283 0 61.208 0 59.696 37 46 0 56 0 56 1 1 0 1 0 1 5478.3 470 3077 464 1039 1191 1191 1 AEAQEAEDQQAR Unmodified 1344.5906 0.59058572 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 13 0 1 28.655 28.655 3 4.348E-20 5956 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.38 113.98 39.349 0 59.187 27.076 0 0 37 0 56 28 0 0 1 0 1 1 0 0 10226 471 3268 465 1040 1192 1192 1 AEAQQLR Unmodified 814.42972 0.42971539 2107 Q61081;A0A1L1STC0 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 0 3.5 0.5 1 1 29.843 29.843 2 0.016064 6826 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.37 27.105 48.846 170.5 233.14 166.33 64.269 146.34 46 167 232 166 65 139 1 2 2 2 1 2 21215 472 2107 466 1041;1042 1193;1194 1194 2 AEASAAGADAGSAVAAHR Acetyl (Protein N-term) 1623.7601 0.76011066 98 A0A0G2JFV4;Q9D0C1 Rnf115 E3 ubiquitin-protein ligase RNF115 yes no 1 0 0 0 1 0 1 40.451 40.451 2 1.6877E-06 11354 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 44.511 28.62 10 0 0 0 0 0 10 0 0 0 0 0 1 0 0 0 0 0 2308.3 473 98 467 1043 1195 1195 1 AEASLER Unmodified 774.38718 0.38718187 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 2 0 1 32.443 32.443 2 0.02751 8224 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.352 17.612 39.357 0 57.849 57.12 34.061 58.724 37 0 56 56 37 56 1 0 1 1 1 1 3367.1 474 3316 468 1044 1196 1196 1 AEATASALADADADLEER Unmodified 1817.8279 0.82791546 248 A0A1B0GT75;A0A1B0GR63;Q9DB34 Chmp2a Charged multivesicular body protein 2a yes no 0 0 0 0 1.5 0.5 1 1 63.884 63.884 3 9.8561E-07 21382 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.793 68.666 30.044 9 0 0 29.288 9.594 28 9 0 0 28 9 2 1 0 0 1 1 7949.7 475 248 469 1045;1046 1197;1198;1199 1197 3 AEAVGEQAR Unmodified 929.45666 0.45665842 2569 Q8JZQ9 Eif3b Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 0 2.5 0.5 1 1 29.337 29.337 2 0.0013993 6764 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.55 32.641 108.46 99.858 81.121 48.196 48.116 0 102 102 83 46 46 0 2 2 2 1 1 0 13144 476 2569 470 1047;1048 1200;1201 1200 2 AEAVPEEEAAASVATLER Unmodified 1841.9007 0.90068647 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 2.5 0.5 1 1 65.776 65.776 3 1.1158E-09 23493 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.34 96.765 30.044 9.576 0 70.194 54.683 19.464 28 9 0 65 56 19 1 1 0 2 3 1 17624 477 2255 471 1049;1050 1202;1203;1204 1202 3 AECCVPVCPR Acetyl (Protein N-term) 1288.5362 0.53624743 2096 Q60930;A0A286YCR8;D3YZT5;D3YUN8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 1 0 0 0 1.5 0.5 1 1 48.245 48.245 2 1.4808E-08 15371 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 151.27 141.04 0 48.022 85.098 65.295 36.073 20.254 0 46 84 65 37 19 0 1 2 2 1 1 49330 478 2096 472 1051;1052 1205;1206 1206 2 AECGTTR Unmodified 793.33885 0.33885147 965 E9QN14;F8VPQ4;Q812A2;F6QZR7 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 2 0 1 18.419 18.419 2 0.026957 2817 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.369 48.683 12.876 0 0 0 12.552 0 12 0 0 0 12 0 1 0 0 0 1 0 1087.9 479 965 473 1053 1207 1207 1 AEDGAAPSPSSETPK Unmodified 1442.6525 0.65251728 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 0 4.14 3.68 3 2 1 1 40.356 40.356 3;4 4.0659E-37 12148 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 178.68 147.09 345.19 219.13 385.58 427.53 677.41 373.71 324 223 384 418 670 362 4 4 5 5 5 4 91414 480 1461 474 1054;1055;1056;1057;1058;1059;1060 1208;1209;1210;1211;1212;1213;1214 1212 7 AEDGENYAIK Unmodified 1108.5037 0.50366819 335 A0A1Y7VJ48;P48428 Tbca Tubulin-specific chaperone A yes no 0 0 0 0 4 0 1 47.654 47.654 2 0.0039637 15149 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.643 32.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 481 335 475 1061 1215 1215 1 AEDGHAVAK Unmodified 896.43519 0.4351947 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 4 0 1 29.945 29.945 3 0.0023907 6908 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.643 48.488 157.83 0 163.99 138.5 194.47 152.22 148 0 158 139 197 148 1 0 1 1 1 1 9249.6 482 182 476 1062 1216 1216 1 AEDGILENGTDAHVMDLQR Deamidation (N) 2083.948 0.94804737 15 G5E8E1;E9Q9T1;A0A087WPK3 Lrrfip1 yes no 0 1 0 0 2 0 1 61.632 61.632 3 0.0021262 21548 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.082 31.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 483 15 477 1063 1217 1217 2 1 AEDGPAKEEPK Unmodified 1169.5564 0.55643205 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 1 5.14 3.27 2 3 1 1 37.644 37.644 3;4 4.0282E-08 9404 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.09 80.244 589.4 586.53 850.06 1217.3 2439 1144 553 573 842 1197 2412 1121 5 6 5 8 8 7 145970 484 1318 478 1064;1065;1066;1067;1068;1069;1070 1218;1219;1220;1221;1222;1223;1224;1225;1226 1226 9 AEDKEWIPVTK Unmodified 1314.682 0.68196691 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 1 7 0 1 59.068 59.068 3 0.0088759 18818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.754 36.556 98.406 149.06 106.07 103.15 107.08 124.86 93 148 111 102 111 120 1 1 1 1 1 1 8392.6 485 1449 479 1071 1227 1227 1 AEDQELESLSAIEAELEK Unmodified 2002.9583 0.95826093 1455 P26339 Chga Chromogranin-A;Pancreastatin;Beta-granin;WE-14;Catestatin;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 0 0 4 0 1 88.284 88.284 3 7.8752E-05 33442 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.864 42.179 0 5.1624 9.4283 0 0 0 0 5 9 0 0 0 0 1 1 0 0 0 713.87 486 1455 480 1072 1228 1228 1 AEDSEIQQEQIYQQSR Unmodified 1950.8919 0.8919127 3078 Q9D7E4 UPF0449 protein C19orf25 homolog yes yes 0 0 0 0 2 0 1 47.933 47.933 3 1.0676E-11 15170 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.92 93.927 0 14.896 15.148 0 33.472 0 0 14 14 0 32 0 0 1 1 0 2 0 3323.1 487 3078 481 1073 1229;1230 1229 2 AEDSGEYHCVYHFVSAPK Unmodified 2094.9105 0.91053965 1841 P97300;H3BIX4;Z4YLB7;A0A0A0MQN8 Nptn Neuroplastin yes no 0 0 0 0 5.5 0.5 1 1 52.838 52.838 4 4.1567E-46 16582 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 155.92 133.77 424.75 133.34 454.63 350.91 357.88 378.32 399 139 444 352 362 361 4 2 4 4 3 3 36996 488 1841 482 1074;1075 1231;1232;1233;1234 1234 4 AEDSGGSLGALR Unmodified 1131.552 0.55201537 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 13 0 1 44.002 44.002 2 0.00012222 13401 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.099 36.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 489 3391 483 1076 1235 1235 1 AEDVGTAQR Unmodified 945.45157 0.45157304 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 2 0.816 1 1 1 28.67 28.67 2 3.0723E-05 6514 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 141.93 88.052 123.5 76.434 97.833 42.925 46.807 111.66 116 79 97 42 46 106 3 2 3 1 1 2 20957 490 2226 484 1077;1078;1079 1236;1237;1238 1237 3 AEDVSAIEIVGGATR Unmodified 1486.7627 0.76273643 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 4.5 0.5 1 1 64.868 64.868 2;3 2.8657E-22 22908 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 141.34 105.8 29.807 27.505 16.599 48.456 44.249 47.773 28 28 19 46 46 46 1 1 1 1 1 1 19603 491 2137 485 1080;1081 1239;1240 1240 2 AEDYDVVK Unmodified 937.43928 0.43927702 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 3 0 1 50.144 50.144 3 0.026477 16717 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.878 21.069 20.064 18.214 38.84 0 0 0 19 19 37 0 0 0 1 1 1 0 0 0 1096.8 492 347 486 1082 1241 1241 1 AEEAGIGDTPNQEDQAAGHVTQAR Unmodified 2464.1215 0.12147172 572 B1AQW2;B1AQW4 Mapt Microtubule-associated protein yes no 0 0 0 0 1.8 0.748 2 2 1 42.311 42.311 3;4 1.2872E-98 12756 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 193.76 179.66 78.219 20.005 101.09 76.209 102.45 61.025 74 19 98 77 102 59 4 1 4 4 3 2 40298 493 572 487 1083;1084;1085;1086;1087 1242;1243;1244;1245;1246 1244 5 AEEATVGQAEEATVGHTEK Unmodified 1955.9072 0.90722841 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 2 0 1 48.961 48.961 4 0.007571 15687 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 38.453 20.965 30.044 0 0 9.837 0 0 28 0 0 9 0 0 1 0 0 1 0 0 1914.1 494 692 488 1088 1247 1247 1 AEEDEILNR Unmodified 1087.5146 0.51456723 1523 P35564 Canx Calnexin yes yes 0 0 0 0 5 5.66 2 1 46.146 46.146 2;3 0.00013855 13589 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 118.5 74.146 88.241 65.794 81.658 84.309 82.07 76.542 83 65 83 83 83 74 2 1 2 2 1 1 54499 495 1523 489 1089;1090;1091 1248;1249;1250 1249 3 AEEDPAK Unmodified 758.34465 0.34464836 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 3 0 1 33.746 33.746 2 0.052604 9086 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.854 41.851 39.115 0 98.45 44.41 0 59.696 37 0 93 46 0 56 1 0 1 1 0 1 11807 496 1148 490 1092 1251 1251 1 AEEDSEEAR Unmodified 1034.4152 0.41524712 2107 Q61081;A0A1L1STC0 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 0 13 0 1 23.65 23.65 2 0.0052286 3731 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.213 54.046 14.925 19.21 0 0 19.051 23.974 14 19 0 0 19 23 1 1 0 0 1 1 1302.9 497 2107 491 1093 1252 1252 1 AEEDSMEDPYELK Unmodified 1554.6396 0.63956933 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 2 0 1 60.721 60.721 3 0.0011768 21045 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.401 38.843 0 0 20.558 0 18.867 29.31 0 0 19 0 19 28 0 0 1 0 1 1 3264.5 498 3285 492 1094 1253 1253 1 AEEDVEPECIMEK Oxidation (M) 1593.6538 0.65383918 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 1 0 1 0 1 51.715 51.715 3 0.060546 15768 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.552 27.352 0 20.216 0 20.259 27.029 38.671 0 19 0 19 28 37 0 1 0 1 1 1 2189.8 499 2154 493 1095 1254 1254 1 AEEEFNIEK Unmodified 1107.5084 0.50841922 1597 P50518;A0A0N4SW07;A0A0N4SWA3;Q9D593 Atp6v1e1;Atp6v1e2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 0 4.67 3.2 2 2 2 1 1 1 56.453 56.453 2;3 9.1427E-05 19075 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.13 85.531 735.63 471.71 576.42 439.37 548.72 668.16 691 489 565 428 556 639 12 9 8 7 8 9 229980 500 1597 494 1096;1097;1098;1099;1100;1101;1102;1103;1104 1255;1256;1257;1258;1259;1260;1261;1262;1263;1264;1265;1266;1267 1267 13 AEEEFQK Unmodified 879.39741 0.39741221 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 7 4.32 1 1 1 44.509 44.509 2;3 0.0070881 13381 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.381 34.815 353.28 334.55 393.5 343.06 204.61 490.92 333 343 398 333 214 466 3 3 3 2 2 3 54691 501 90 495 1105;1106;1107 1268;1269;1270 1270 3 AEEELAVDSVLEPEQEK Unmodified 1913.9106 0.91058246 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 2 0 1 71.706 71.706 3 8.4905E-05 25994 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.728 48.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 502 133 496 1108 1271 1271 1 AEEELIK Unmodified 830.43855 0.43854874 2210 Q6P1B9 Bin1 yes yes 0 0 0 0 3 0 1 51.549 51.549 2 0.014379 17330 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.6 37.545 88.473 62.432 45.58 0 58.576 0 83 65 46 0 56 0 1 1 1 0 1 0 12888 503 2210 497 1109 1272 1272 1 AEEGIAAGGVMDVNTALQEVLK Acetyl (Protein N-term) 2256.1308 0.13076276 1013 Q6ZWZ6;F7AEH4;P63323 Rps12 40S ribosomal protein S12 yes no 1 0 0 0 4.5 0.5 1 1 104.11 104.11 3 2.8875E-18 36211 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.122 49.911 5.3507 2.8312 5.0338 11.723 0 9.594 5 3 5 11 0 9 1 1 1 2 0 2 2590.6 504 1013 498 1110;1111 1273;1274 1274 2 AEEIDAK Unmodified 774.37595 0.37594848 1597 P50518;A0A0N4SW07;A0A0N4SWA3;Q9D593 Atp6v1e1;Atp6v1e2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 0 3.25 0.829 1 1 2 41.96 41.96 2;3 0.0089677 12850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.25 20.805 217.89 194.18 328.08 0 375.9 311.35 204 185 315 0 367 296 2 1 3 0 3 3 88350 505 1597 499 1112;1113;1114;1115 1275;1276;1277;1278 1276 4 AEEIDVAK Unmodified 873.44436 0.4443624 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4 0 1 49.353 49.353 2 0.0077941 15974 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.429 26.259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 506 1382 500 1116 1279 1279 1 AEEILEK Unmodified 830.43855 0.43854874 855 E9PZB3;E9PYL9;Q9CXW4;A2BH06 Gm5093;Gm10036;Rpl11 60S ribosomal protein L11 yes no 0 0 0 0 5 0 1 54.848 54.848 2 0.027593 18243 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.253 17.757 88.094 71.093 101.88 84.647 0 127.92 83 74 102 83 0 120 1 1 1 1 0 1 8239.8 507 855 501 1117 1280 1280 1 AEELESR Unmodified 832.39266 0.39266118 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 1.75 0.829 2 1 1 33.687 33.687 2 0.019296 9108 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.09 0 306.03 175.98 243.8 288.83 307.37 297.17 287 185 241 279 315 287 3 2 2 3 3 4 60688 508 1669 502 1118;1119;1120;1121 1281;1282;1283;1284 1283 4 AEELFLWVPR Unmodified 1258.671 0.67100829 2752 Q91WC0;F2Z438;F2Z420 Setd3 Histone-lysine N-methyltransferase setd3 yes no 0 0 0 0 8 0 1 86.425 86.425 2 0.045513 31050 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.937 31.43 0 0 20.173 8.6347 0 0 0 0 19 9 0 0 0 0 1 1 0 0 609.25 509 2752 503 1122 1285 1285 1 AEELLAEEK Unmodified 1030.5183 0.51825563 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 6.25 3.96 1 1 1 1 58.065 58.065 2;3 0.00027004 20139 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 129.38 61.39 247.36 188.1 84.552 127.93 387.52 392.96 231 185 83 120 389 379 3 3 2 2 5 5 33669 510 815;2590 504 1123;1124;1125;1126 1286;1287;1288;1289;1290 1287 5 AEELQPGFSK Unmodified 1104.5451 0.54513908 1991 Q3UJU9 Rmdn3 Regulator of microtubule dynamics protein 3 yes yes 0 0 0 0 5 0 1 54.484 54.484 3 0.02285 18109 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.741 23.524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 511 1991 505 1127 1291 1291 1 AEEQAVR Unmodified 801.39808 0.39808091 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1 0 1 25.681 25.681 2 0.03171 4702 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.916 21.609 0 58.63 57.074 0 56.435 62.35 0 56 56 0 56 60 0 1 1 0 1 1 16915 512 3266 506 1128 1292 1292 1 AEEQDFAQLCR Acetyl (Protein N-term) 1407.6089 0.60887832 411 A0A338P748;D3YZH5;D3Z2R6;D3Z7N9;H9KV05;Q99JN2 Klhl22 Kelch-like protein 22 yes no 1 0 0 0 1.5 0.5 1 1 61.155 61.155 2 0.0024994 21326 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.23 51.531 29.839 38.097 19.335 9.837 18.828 0 28 38 19 9 18 0 1 2 1 1 1 0 4041.8 513 411 507 1129;1130 1293;1294 1294 2 AEEQEPELTSTPNFVVEVTK Unmodified 2246.0954 0.095423113 2676 Q8R5L1 C1qbp yes yes 0 0 0 0 4.33 1.11 2 1 2 1 74.713 74.713 3;4 7.0866E-11 28077 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.55 79.865 119.1 100.27 226.87 9.3192 153.05 137.79 112 102 214 9 148 130 4 3 4 1 3 3 37008 514 2676 508 1131;1132;1133;1134;1135;1136 1295;1296;1297;1298;1299;1300;1301 1296 7 AEEQPQVELFVK Acetyl (Protein N-term) 1457.7402 0.74021007 3382 Q9Z1Q5 Clic1 Chloride intracellular channel protein 1 yes yes 1 0 0 0 4 0 1 78.807 78.807 2 0.018214 29411 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.308 23.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 515 3382 509 1137 1302 1302 1 AEETETAAPPPDKDR Unmodified 1625.7533 0.75329395 126 A0A0N4SV05;A0A0N4SVH3;A0A0R4J0U2;Q0VGB7 Ppp4r2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 yes no 0 0 0 1 2 0 1 35.868 35.868 3 6.6557E-05 9963 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.669 66.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1823.9 516 126 510 1138 1303 1303 1 AEEVEYYYR Unmodified 1220.535 0.53496832 717 Q91YS4;D3YXZ3;O88448 Klc2 Kinesin light chain 2 yes no 0 0 0 0 3.5 0.5 1 1 51.756 51.756 2 0.026029 17107 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.828 33.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 517 717 511 1139;1140 1304;1305 1305 2 AEEYEFLTPMEEAPK Unmodified 1782.8022 0.80221798 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 3.6 0.49 2 3 74.188 74.188 2;3;4 1.6882E-05 27939 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.706 69.266 110.3 7.7188 134.03 84.612 82.931 89.544 103 9 130 83 83 84 3 1 3 1 1 3 54101 518 2889 512 1141;1142;1143;1144;1145 1306;1307;1308;1309;1310;1311 1307 6 AEEYQEK Unmodified 895.39233 0.39232683 3171 Q9EQC5 Scyl1 N-terminal kinase-like protein yes yes 0 0 0 0 3 0 1 36.843 36.843 2 0.025 10597 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.374 45.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 519 3171 513 1146 1312 1312 1 AEFFADVVPAVR Unmodified 1319.6874 0.68738664 2374 Q8BGB7 Enoph1 Enolase-phosphatase E1 yes yes 0 0 0 0 7.5 0.5 1 1 76.976 76.976 3 4.3251E-05 26551 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.338 68.348 0 20.216 29.937 8.0527 48.514 18.87 0 19 28 9 47 19 0 1 1 1 1 1 5710 520 2374 514 1147;1148 1313;1314 1314 2 AEFVEVTK Unmodified 921.48075 0.48074791 656 CON__P02769 yes yes 0 0 0 0 9.5 3.5 1 1 56.805 56.805 2 0.001171 19410 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.91 80.502 86.553 170.19 672.05 122.38 0 266.5 83 176 636 130 0 250 1 2 2 1 0 2 33779 + 521 656 515 1149;1150 1315;1316 1316 2 AEFVWHK Unmodified 915.46029 0.46028724 2771 Q91YJ2;A0A338P7D2 Snx4 Sorting nexin-4 yes no 0 0 0 0 8.5 0.5 1 1 54.773 54.773 3 0.030919 16109 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.559 36.013 59.613 0 79.767 0 77.404 0 56 0 74 0 74 0 1 0 1 0 1 0 3307.1 522 2771 516 1151;1152 1317;1318 1317 2 AEGAAQLSEER Unmodified 1159.5469 0.54692999 1660 P59017 Bcl2l13 Bcl-2-like protein 13 yes yes 0 0 0 0 2.5 0.5 1 1 37.465 37.465 2 2.1725E-08 10635 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130.1 75.661 119.4 43.993 93.151 95.027 56.921 0 112 46 93 93 56 0 2 1 2 2 1 0 13748 523 1660 517 1153;1154 1319;1320 1319 2 AEGAGTEEEGTPK Unmodified 1274.5626 0.56263964 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 3.2 3.4 3 3 2 1 1 36.149 36.149 2;3;4 1.7606E-87 9507 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 230.95 193.23 416.07 776 893.87 751.57 1132.1 1103.7 394 766 887 746 1140 1062 7 8 8 8 7 8 823860 524 2769 518 1155;1156;1157;1158;1159;1160;1161;1162;1163;1164 1321;1322;1323;1324;1325;1326;1327;1328;1329;1330;1331;1332 1322 12 AEGATLSNATGAVESTSQAGDR Unmodified 2091.9669 0.96686856 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 3 0 1 50.727 50.727 3 7.4297E-12 17030 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.579 58.695 20.265 0 20.456 0 29.288 0 19 0 19 0 28 0 1 0 1 0 1 0 2413.9 525 2133 519 1165 1333 1333 1 AEGDAAALNR Unmodified 986.47812 0.47812214 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 3 0 2 34.996 34.996 2;3 0.0050051 9691 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.246 34.478 39.701 20.216 0 20.767 0 59.696 37 19 0 19 0 56 1 1 0 1 0 1 4821.7 526 2196 520 1166;1167 1334;1335 1335 2 AEGDTLVSVDYEIFGK Acetyl (Protein N-term) 1783.8516 0.85161101 1635 P56376;Q8BMV3 Acyp1 Acylphosphatase-1 yes no 1 0 0 0 5 0 1 96.264 96.264 2 7.0477E-05 35553 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.616 29.929 0 0 9.5198 4.8976 0 0 0 0 9 5 0 0 0 0 1 1 0 0 949.73 527 1635 521 1168 1336 1336 1 AEGEDVGWWR Acetyl (Protein N-term) 1245.5415 0.54145068 2337 Q80Y55 Bsdc1 BSD domain-containing protein 1 yes yes 1 0 0 0 2 0 1 73.268 73.268 2 0.025716 26591 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.8 47.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 528 2337 522 1169 1337 1337 1 AEGEEEQPK Unmodified 1015.4458 0.44581896 3162 Q9EPK2 Rp2 Protein XRP2 yes yes 0 0 0 0 1.33 0.471 2 1 32.762 32.762 2;3 2.9635E-05 8006 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.37 115.16 0 68.003 69.196 55.302 113.24 39.98 0 65 70 56 112 38 0 2 2 2 3 1 15678 529 3162 523 1170;1171;1172 1338;1339;1340 1338 3 AEGEITTFAALTER Acetyl (Protein N-term) 1549.7624 0.76240208 1689 P61148;D3Z192;D3Z6H1;D6RCX9;D3Z6E2 Fgf1 Fibroblast growth factor 1;Fibroblast growth factor yes no 1 0 0 0 2.5 0.5 1 1 83.982 83.982 2 6.4723E-11 31137 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.676 42.612 2 0 0 0 2 0 2 0 0 0 2 0 1 0 0 0 1 0 2866.5 530 1689 524 1173;1174 1341;1342 1342 2 AEGIPELQASEK Unmodified 1270.6405 0.64049603 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4.5 0.5 1 1 57.315 57.315 2 6.0059E-13 19775 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.1 83.969 50.088 8.2041 71.262 40.102 18.032 70.356 47 9 66 37 19 66 2 1 2 1 1 3 4720.9 531 1999 525 1175;1176 1343;1344;1345;1346 1344 4 AEGLLDVFQAVK Unmodified 1288.7027 0.70270235 250 A0A1B0GRT6;A0A1B0GRH2;P49446 Ptpre Receptor-type tyrosine-protein phosphatase epsilon yes no 0 0 0 0 8 0 1 86.584 86.584 3 0.03131 31193 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.041 23.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532 250 526 1177 1347 1347 1 AEGQPEPSR Unmodified 969.45157 0.45157304 558 A6MDD2;Q60673 Ptprn Receptor-type tyrosine-protein phosphatase-like N yes no 0 0 0 0 1 0 1 25.03 25.03 2 0.0032785 4479 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.265 47.148 29.877 0 27.986 48.478 65.131 18.395 28 0 28 47 65 19 1 0 1 1 1 1 12026 533 558 527 1178 1348 1348 1 AEGQVLVLDGR Acetyl (Protein N-term) 1197.6354 0.63535107 1416 P19253;A0A1B0GSB2;A0A140T8K2;A0A1B0GSL5;A0A1B0GSC2;A0A1B0GRH1 Rpl13a 60S ribosomal protein L13a yes no 1 0 0 0 2.5 0.5 1 1 65.979 65.979 2 4.1645E-13 23903 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.009 72.39 0 19 19 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 19012 534 1416 528 1179;1180 1349;1350 1350 2 AEGSDVANAVLDGADCIMLSGETAK Deamidation (N) 2494.1203 0.12033401 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 1 0 0 3.5 0.5 1 1 84.332 84.332 4 1.5999E-16 29725 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.19 61.424 0 0 9.471 46.435 0 36.244 0 0 9 43 0 34 0 0 1 2 0 2 3890.8 535 1609 529 1181;1182 1351;1352 1351 616 2 AEGSDVANAVLDGADCIMLSGETAK Unmodified 2493.1363 0.13631842 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 6.17 3.24 1 1 1 2 1 87.791 87.791 3;4 3.0546E-23 33620 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.08 85.773 72.526 19.586 218.3 130.2 169.18 135.39 68 19 208 130 167 130 4 1 6 5 5 3 111260 536 1609 529 1183;1184;1185;1186;1187;1188 1353;1354;1355;1356;1357;1358;1359;1360 1357 8 AEGSDVANAVLDGADCIMLSGETAK Oxidation (M) 2509.1312 0.13123305 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 1 0 4 0 1 77.538 77.538 4 0.00026258 28891 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.091 28.631 0 0 0 41.019 27.404 0 0 0 0 38 28 0 0 0 0 1 1 0 2800.7 537 1609 529 1189 1361 1361 109 1 AEGSDVANAVLDGADCIMLSGETAK Oxidation (M);Deamidation (N) 2510.1152 0.11524863 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 1 1 0 4 0 1 87.816 87.816 4 2.3015E-05 33339 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.827 36.666 0 0 0 14.503 42.465 23.306 0 0 0 14 42 23 0 0 0 1 1 1 757.54 538 1609 529 1190 1362 1362 616 109 1 AEGSEIR Unmodified 760.37153 0.37153181 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 2 0 1 27.548 27.548 2 0.019609 6055 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.67 33.483 108.79 130.98 0 139 164.06 123.24 102 130 0 130 167 120 1 1 0 1 1 1 17530 539 1331 530 1191 1363 1363 1 AEGSEYQVLYIADDNEIR Unmodified 2083.9698 0.96982867 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 4 0 1 71.043 71.043 3 2.1296E-05 25761 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.449 50.167 9.3875 19.096 29.103 0 0 0 9 19 28 0 0 0 1 1 1 0 0 0 2829.1 540 175 531 1192 1364 1364 1 AEGVTALPYFLFK Unmodified 1454.781 0.78095267 52 S4R2D5;S4R2T5;A0A0A0MQN4;Q9D906;S4R2P7;S4R1T0 Atg7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 0 0 0 0 11 0 1 90.921 90.921 3 0.0054562 29180 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.627 18.442 29.839 17.881 19.335 0 0 0 28 19 19 0 0 0 1 1 1 0 0 0 2354.1 541 52 532 1193 1365 1365 1 AEGYEVAHGGR Unmodified 1144.5261 0.52613497 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 6.67 4.5 1 1 1 29.685 29.685 3 0.0011182 6412 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.395 47.531 218.15 147.47 30.296 40.441 184.54 291.08 204 148 28 37 185 278 3 2 1 1 2 3 33806 542 2080 533 1194;1195;1196 1366;1367;1368;1369 1369 4 AEIENVK Unmodified 801.42323 0.42323303 2009 Q3UV17;CON__Q01546 Krt76 Keratin, type II cytoskeletal 2 oral yes no 0 0 0 0 6 0 1 28.876 28.876 3 0.060454 5508 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.718 6.696 68.726 81.975 101.86 72.69 112.77 0 65 83 102 74 111 0 1 1 1 1 1 0 3282.8 + 543 2009 534 1197 1370 1370 1 AEIIADK Unmodified 758.41742 0.41741937 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 9.5 3.5 1 1 50.471 50.471 2 0.025835 16429 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.15 16.306 156.4 232.85 206.44 207.93 145.71 262.34 148 232 213 204 148 250 2 2 2 2 1 2 18214 544 2985 535 1198;1199 1371;1372 1372 2 AEITDAEGLGLK Unmodified 1215.6347 0.63468237 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 4.5 0.5 1 1 64.844 64.844 3 0.00022097 23015 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.555 39.226 49.026 65.854 0 50.278 0 29.848 46 65 0 46 0 28 1 1 0 1 0 1 9283.6 545 895 536 1200;1201 1373;1374 1373 2 AEKDEPGAWEETFK Unmodified 1635.7417 0.74166663 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 1 5 0 1 60.395 60.395 3 0.0011392 20925 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.605 50.324 59.644 44.302 37.075 0 0 49.036 56 46 37 0 0 46 1 1 1 0 0 1 3243.6 546 2408 537 1202 1375 1375 1 AELAELPLR Unmodified 1010.576 0.57604528 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 6 0 1 63.61 63.61 2 0.0039594 21759 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.37 53.218 59.717 0 62.362 50.66 72.622 71.482 56 0 60 51 74 69 1 0 1 1 1 1 7370.6 547 3174 538 1203 1376 1376 1 AELAESK Unmodified 746.38103 0.38103386 782;926;209 P21107;A0A0R4J1P2;D3YVR0;D3Z6I8;E9Q7Q3 Tpm3 Tropomyosin alpha-3 chain no no 0 0 0 0 7.33 4.03 1 1 1 41.57 41.57 2 0.019014 12029 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.46 8.2728 478.19 367.38 399.99 761.7 423.99 721.31 449 362 388 726 437 688 2 2 1 3 1 2 80544 548 209;782;926 539 1204;1205;1206 1377;1378;1379 1378 3 AELAESR Unmodified 774.38718 0.38718187 757 D3Z2H9 Tpm3-rs7 no no 0 0 0 0 4 0 1 32.869 32.869 2 0.028158 8128 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.754 10.98 108.74 140.56 0 149.61 123.44 164.91 102 139 0 139 130 158 1 1 0 1 1 1 11254 549 757 540 1207 1380 1380 1 AELAPETTETPVETPETVQATDLSLNPEEGSK Unmodified 3382.6151 0.6151353 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 3 0.816 1 1 1 74.147 74.147 4 2.5734E-20 27234 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.514 66.627 29.819 46.39 63.224 99.237 71.952 84.293 28 44 62 93 71 81 1 2 2 3 3 4 58864 550 817 541 1208;1209;1210 1381;1382;1383;1384;1385 1385 5 AELATEEFLPVTPILEGFVILR Unmodified 2456.3567 0.3566636 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 10 3 1 1 112.07 112.07 3 3.4327E-16 44528 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.059 70.103 2.136 1.984 0 9.5935 12.946 6.1418 2 2 0 9 13 6 1 1 0 2 2 1 2187 551 2697 542 1211;1212 1386;1387 1387 2 AELDDTPMR Unmodified 1046.4703 0.47025958 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 2.5 0.5 1 1 46.532 46.532 2 0.0012583 14989 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.2 65.176 78.699 0 118.1 36.026 82.865 106.37 74 0 111 37 83 102 2 0 2 1 1 2 16916 552 2724 543 1213;1214 1388;1389 1389 2 AELDGSER Unmodified 875.39847 0.39847484 354 A0A286YCQ5;O88322 Nid2 Nidogen-2 yes no 0 0 0 0 1.5 0.5 1 1 32.836 32.836 2 0.011846 7998 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.783 36.107 29.755 66.554 35.891 0 0 20.254 28 65 37 0 0 19 1 2 2 0 0 1 17208 553 354 544 1215;1216 1390;1391 1390 2 AELDGTILK Unmodified 958.53351 0.53351176 2658 Q8R326 Pspc1 Paraspeckle component 1 yes yes 0 0 0 0 5 0 1 62.183 62.183 3 0.00090099 21751 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.516 39.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 554 2658 545 1217 1392 1392 1 AELEEELK Unmodified 959.48114 0.48114184 3428 yes no 0 0 0 0 3 0 1 56.62 56.62 2 0.012545 19781 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.948 4.4501 44.497 35.27 65.681 51.828 0 84.214 42 37 65 51 0 79 1 1 1 1 0 1 4600.5 + 555 3428 546 1218 1393 1393 1 AELFTQSCADLDK Unmodified 1496.6817 0.68170891 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.5 0.5 1 1 65.473 65.473 2;3 3.591E-15 22551 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.86 83.993 49.225 26.473 0 50.278 0 0 46 28 0 46 0 0 1 1 0 1 0 0 4294.6 556 2148 547 1219;1220 1394;1395 1395 2 AELGALPDDFIDSLEK Unmodified 1731.8567 0.85669639 359 Q91YP2;A0A286YD12;A0A286YD77 Nln Neurolysin, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 90.391 90.391 3 0.0026962 34410 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.892 25.939 24.465 27.645 29.727 0 9.414 9.594 23 28 28 0 9 9 1 2 1 0 1 1 2565.6 557 359 548 1221;1222 1396;1397 1396 2 AELGFLESCLR Unmodified 1293.6387 0.63872189 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 6 0 1 74.9 74.9 3 0.018661 27127 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.077 23.827 0 9.576 0 0 28.291 29.041 0 9 0 0 28 28 0 1 0 0 1 1 1374.7 558 3203 549 1223 1398 1398 1 AELLLLQSTAEQLR Unmodified 1583.8883 0.88827129 869 F7BX42;E9PZM8;Q99J85 Nptxr Neuronal pentraxin receptor yes no 0 0 0 0 10 2.16 1 1 1 81.728 81.728 3 4.8403E-05 31606 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.904 61.523 20.244 57.732 29.112 50.863 27.029 58.925 19 56 28 47 28 56 1 3 1 2 1 2 20609 559 869 550 1224;1225;1226 1399;1400;1401 1401 3 AELNNEK Unmodified 816.39775 0.39774656 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06;Q5SWR0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 4 0 1 37.633 37.633 2 5.8334E-07 10432 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.56 44.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 560 3123 551 1227 1402 1402 1 AELPLAWFGPPAPAAPPSAR Unmodified 2015.0629 0.062881613 41 A0A0A0MQ93 Tmem132e yes yes 0 0 0 0 9 0 1 86.13 86.13 3 0.0030737 30241 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.521 22.926 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 1825.7 561 41 552 1228 1403 1403 1 AELQEVQITEEKPLLPGQTPETAK Acetyl (Protein N-term) 2690.4014 0.40144154 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BQM5;A0A2I3BPW0;A0A2I3BPL1;A0A2I3BS20 Ndrg2 Protein NDRG2 no no 1 0 0 1 4 0 1 76.28 76.28 3 2.2138E-15 28223 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.827 39.684 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 19611 562 3277;377 553 1229 1404 1404 1 AELQMLLEEEIPGGR Acetyl (Protein N-term) 1725.8607 0.86073591 18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WR90 Abi2 Abl interactor 2 yes no 1 0 0 0 3 0 1 100.81 100.81 2 6.5481E-69 32626 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.81 100.63 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 1225.9 563 18 554 1230 1405 1405 1 AELQMLLEEEIPSGKR Acetyl (Protein N-term) 1883.9663 0.96626362 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 1 0 0 1 4 0 1 88.715 88.715 3 4.2571E-05 33493 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.059 48.358 0 0 0 6.4455 5.9799 0 0 0 0 6 6 0 0 0 0 1 1 0 1532.1 564 634 556 1231 1406 1406 1 AELSEEALLSVLPTIR Acetyl (Protein N-term) 1781.9775 0.97748023 1641 Q3U4W8;P56399;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 1 0 0 0 7 3.16 1 1 1 1 1 108.07 108.07 2 1.5619E-90 36476 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.36 88.128 7.4771 3.9513 4.2029 1.035 11.185 18.335 7 4 4 1 11 18 3 3 2 1 2 2 12731 565 1641 557 1232;1233;1234;1235;1236 1407;1408;1409;1410;1411;1412;1413;1414 1408 8 AELSEGK Unmodified 732.36538 0.3653838 905;1106;1107;1656 E9Q452;E9Q454;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 7 3.54 1 1 1 1 40.276 40.276 2 0.014918 11349 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.89 21.983 438.26 537.83 365.75 305.19 487.79 548.93 413 539 373 304 493 528 3 3 2 2 2 3 83126 566 905;1106;1107;1656 558 1237;1238;1239;1240 1415;1416;1417;1418 1418 4 AELSEGQVR Unmodified 987.49852 0.49852324 906 E9Q453 Tpm1 no no 0 0 0 0 3 0 1 37.634 37.634 2 0.015163 11043 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.375 27.499 29.699 36.919 26.686 27.954 56.322 28.241 28 37 28 28 56 28 1 1 1 1 1 1 2350.7 567 906 559 1241 1419 1419 1 AELTVEVR Acetyl (Protein N-term) 957.51311 0.51311067 92 A0A0G2JEP0;Q61584;A0A0G2JGH0 Fxr1 Fragile X mental retardation syndrome-related protein 1 yes no 1 0 0 0 2 0 1 59.538 59.538 2 0.027883 20539 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.127 44.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 821.68 568 92 560 1242 1420 1420 1 AELVLIDEDDEK Unmodified 1387.6719 0.67185573 2447 Q8BR92 Palm2 Paralemmin-2 yes yes 0 0 0 0 3.5 0.5 1 1 69.303 69.303 3 0.0001732 25605 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.466 40.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 569 2447 561 1243;1244 1421;1422 1421 2 AELVVIEDAATPR Unmodified 1382.7405 0.74054442 3360 Q9Z0P4;A0A1W2P831 Palm Paralemmin-1 no no 0 0 0 0 4.75 0.829 2 1 1 68.581 68.581 2;3 0.00010446 24773 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.563 51.628 20.244 67.795 58.866 128.81 139.61 47.98 19 65 56 121 139 47 1 2 2 3 3 2 42285 570 3360 562 1245;1246;1247;1248 1423;1424;1425;1426 1424 4 AEMLEIVQAIYK Unmodified 1406.7479 0.74793799 2763 Q91X97;D3YVA2;D3Z2Z8 Ncald Neurocalcin-delta yes no 0 0 0 0 10 1.67 1 1 2 1 90.474 90.474 2;3 3.7928E-20 31981 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 154.24 113.89 95.663 173.61 66.286 89.084 62.76 39.442 92 167 65 84 60 37 3 5 2 3 2 1 22614 571 2763 563 1249;1250;1251;1252;1253 1427;1428;1429;1430;1431;1432;1433 1428 7 AEMMELNDR Unmodified 1107.4689 0.46887937 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 3 0 1 51.078 51.078 2 0.051566 17180 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.434 24.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 572 1304 564 1254 1434 1434 1 AEMNGLAAQGR Deamidation (N) 1117.5186 0.51860675 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 1 0 0 4 0 2 43.383 43.383 2 5.248E-08 12462 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.76 83.796 147.95 66.325 214.01 44.844 197.9 86.413 139 74 204 46 194 83 1 1 2 1 2 1 27716 573 1308 565 1255;1256 1435;1436 1435 362 2 AENFFILR Unmodified 1008.5393 0.53926584 1663 P59999;Q3TX55;E9PWA7 Arpc4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 11 2 1 1 70.774 70.774 2 0.010729 26284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.311 55.286 157.32 95.094 423.89 369.97 371.74 193.7 148 102 413 368 378 185 1 1 2 2 2 1 88972 574 1663 567 1257;1258 1437;1438 1438 2 AENSLSDGGPADSVEAAK Acetyl (Protein N-term) 1758.7908 0.79080167 637 B7ZNL2;Q78ZA7;A0A140LJ37 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 1 0 0 0 1.33 0.471 2 1 59.107 59.107 2;3 7.372E-07 19099 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.494 66.803 97.845 71.217 94.083 83.958 119.42 114.92 92 74 93 84 121 111 2 2 1 2 2 3 49065 575 637 569 1259;1260;1261 1439;1440;1441 1439 3 AENSLSDGGPADSVEAAK Acetyl (Protein N-term);Deamidation (N) 1759.7748 0.77481726 637 B7ZNL2;Q78ZA7;A0A140LJ37 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 1 1 0 0 1 0 2 60.644 60.644 3 0.00048128 19893 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.193 22.217 50.048 18.848 48.403 57.644 36.092 29.349 47 19 46 56 38 28 2 1 1 2 2 1 9174.8 576 637 569 1262;1263 1442;1443 1442 182 2 AENSSLNLIGK Unmodified 1144.6088 0.60880197 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 8 2.61 2 1 1 1 59.148 59.148 2;3 6.4213E-10 18919 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.94 81.392 961.72 796.03 1075.7 854 581.6 858.85 906 826 1078 850 596 815 5 5 5 5 4 3 188770 577 1554 570 1264;1265;1266;1267;1268 1444;1445;1446;1447;1448 1446 5 AENSSLNLIGK Deamidation (N) 1145.5928 0.59281755 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 1 0 0 7 1 1 1 62.909 62.909 2 2.6376E-05 18199 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.937 45.941 59.613 24.789 58.804 0 0 88.478 56 28 56 0 0 83 1 1 1 0 0 1 6038.7 578 1554 570 1269;1270 1449;1450 1450 581;582 2 AENYDISPADR Unmodified 1249.5575 0.55749468 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 44.256 44.256 2 3.852E-20 13309 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 174.57 128.41 69.57 234.88 117.22 197.15 272.22 320.41 65 227 120 189 274 305 1 4 2 3 4 4 130060 579 1876 571 1271;1272;1273;1274 1451;1452;1453;1454;1455 1455 5 AENYQLLWDTIASLK Unmodified 1763.9094 0.90940066 690 D3YUZ8 Dlg2 yes yes 0 0 0 0 10.5 0.5 1 1 99.573 99.573 3 0.00031254 32509 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.022 45.915 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 0 0 3089.2 580 690 572 1275;1276 1456;1457 1456 2 AEPDESNAR Unmodified 987.42575 0.42575222 1688 P61089;A0A1W2P7Z3 Ube2n Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 0 13 0 1 24.282 24.282 2 0.00043201 3907 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.98 84.001 0 0 24.06 18.538 47.185 32.766 0 0 23 19 47 32 0 0 1 1 2 2 8244.7 581 1688 573 1277 1458;1459 1458 2 AEPDPSDPLETQAGK Acetyl (Protein N-term) 1595.7315 0.73149588 2702 Q8VDQ8 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes yes 1 0 0 0 1 0 1 61.223 61.223 2 0.00017597 20148 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.76 59.494 20.265 0 20.456 30.604 0 20.254 19 0 19 28 0 19 1 0 1 1 0 1 5624.7 582 2702 574 1278 1460;1461 1460 2 AEPEDHYFLLTEPPLNTPENR Unmodified 2481.1812 0.18121843 2836 Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WP86;A0A087WS98;A0A087WQ83 Actr3 Actin-related protein 3 yes no 0 0 0 0 7.33 4.11 1 1 1 1 2 68.849 68.849 3 6.6909E-30 24888 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.43 113.63 29.79 47.676 48.385 48.276 158.76 145.28 28 47 47 47 158 140 2 3 2 2 5 5 53453 583 2836 575 1279;1280;1281;1282;1283;1284 1462;1463;1464;1465;1466;1467;1468;1469;1470 1465 9 AEPEDHYFLLTEPPLNTPENR Deamidation (N) 2482.1652 0.16523401 2836 Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WP86;A0A087WS98;A0A087WQ83 Actr3 Actin-related protein 3 yes no 0 1 0 0 13 0 1 68.248 68.248 3 2.7304E-08 25153 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.029 63.69 20.244 28.427 0 29.794 43.055 107.5 19 28 0 28 46 102 1 1 0 1 1 1 10280 584 2836 575 1285 1471 1471 1006 1 AEPEDHYFLMTEPPLNTPENR Unmodified 2499.1376 0.13763905 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 3 0 1 66.311 66.311 3 2.7347E-07 24047 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.25 50.321 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 2926 585 2170 576 1286 1472 1472 1 AEPEKSEGAAEEQPEPAPAPEQEAAAPGPAAGGEAPK Unmodified 3564.6492 0.6492294 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 5.14 5.03 2 1 2 2 50.183 50.183 4;5 2.2929E-40 14859 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.186 72.39 425.66 674.49 643 504.76 888.13 767.78 402 671 648 503 892 741 5 9 7 8 9 7 256410 586 2769 577 1287;1288;1289;1290;1291;1292;1293 1473;1474;1475;1476;1477;1478;1479;1480;1481;1482 1473 10 AEPLNSVAH Unmodified 936.46649 0.46649483 2267 Q6ZWM4;A0A0N4SUZ3 Lsm8 U6 snRNA-associated Sm-like protein LSm8 yes no 0 0 0 0 4 0 1 41.332 41.332 2 0.016722 12161 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.981 67.981 0 38.46 54.339 88.573 0 0 0 37 56 84 0 0 0 1 1 1 0 0 4322 587 2267 578 1294 1483 1483 1 AEPPLNASAGDQEEK Unmodified 1554.7162 0.71618016 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 0 3 0 1 47.171 47.171 3 8.8684E-05 15314 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.729 49.302 0 48.944 0 0 29.288 0 0 46 0 0 28 0 0 1 0 0 1 0 2099.9 588 3234 579 1295 1484 1484 1 AEPPQCTSLAWSADGQTLFAGYTDNLVR Unmodified 3067.4345 0.43454936 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 5 0 1 86.012 86.012 4 0.0010937 32875 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.934 30.822 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1857.7 589 1792 580 1296 1485 1485 1 AEPQELLQLDGYTVDYTDPQPGLEGGR Unmodified 2960.404 0.40396073 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 4 0 1 82.516 82.516 3 0.038203 31183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 26.187 19.075 20.387 0 0 9.837 0 0 19 0 0 9 0 0 1 0 0 1 0 0 1653.2 590 2301;365 581 1297 1486;1487 1487 2 AEPSQLDIK Unmodified 999.52368 0.52367535 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 6.6 3.26 1 2 1 1 52.348 52.348 2;3 0.00043256 17166 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.97 61.704 234.91 534.81 602.89 217.4 608.47 535.89 222 527 592 223 606 519 3 5 4 2 4 4 71727 591 1424 582 1298;1299;1300;1301;1302 1488;1489;1490;1491;1492 1490 5 AEPTQNALPFPHSAGDR Unmodified 1806.8649 0.86491009 3402 Q9Z2Y3;Q3UVL6 Homer1 Homer protein homolog 1 yes no 0 0 0 0 5 0 1 49.607 49.607 3 7.0485E-26 15803 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 141.86 125.6 20.104 0 47.557 47.444 0 29.848 19 0 46 46 0 28 1 0 1 1 0 1 7371 592 3402 583 1303 1493 1493 1 AEQEPTAEQLAQIAAENEEDEHSVNYKPPAQK Acetyl (Protein N-term) 3605.6758 0.6757785 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 1 0 0 1 3 0 2 68.243 68.243 4;5 2.4407E-20 24974 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.107 59.869 34.224 51.366 35.29 97.774 94.192 34.112 32 51 37 93 93 32 1 2 1 2 1 1 138080 593 2889 584 1304;1305 1494;1495 1494 2 AEQESLEFGK Acetyl (Protein N-term) 1178.5455 0.54553301 2069 Q5SYD0 Myo1d Unconventional myosin-Id yes yes 1 0 0 0 4 0 1 63.546 63.546 2 0.019541 22550 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.891 24.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 594 2069 585 1306 1496 1496 1 AEQIAGR Unmodified 743.3926 0.3926016 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 6 0 1 30.53 30.53 2 0.04914 6263 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.774 39.166 88.542 102.56 0 100.28 72.798 0 83 102 0 93 74 0 1 1 0 1 1 0 5603.7 595 2582 586 1307 1497 1497 1 AEQINQAAGEASAVLAK Unmodified 1669.8635 0.8635131 2827 Q99JB2;A2AG39;F6WI02 Stoml2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 0 6 0 1 68.084 68.084 3 1.1283E-08 23850 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.97 57.167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 596 2827 587 1308 1498 1498 1 AEQQGRPDDNLK Unmodified 1369.6586 0.65860571 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 1 13 0 1 34.271 34.271 3 0.05022 8658 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.594 3.0051 0 69.16 0 60.214 52.823 86.971 0 65 0 56 56 83 0 1 0 1 1 1 3152.4 597 2792 588 1309 1499 1499 1 AEQSQQQAAR Unmodified 1115.5319 0.53194863 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;F6RCU2;F7CB97 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 2.5 0.5 1 1 19.249 19.249 2 0.004647 2880 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.221 38.222 0 3.0866 6.3068 0 12.552 0 0 3 6 0 12 0 0 1 1 0 1 0 1660.1 598 761 589 1310;1311 1500;1501 1501 2 AEQVALSR Acetyl (Protein N-term) 914.48214 0.48214489 1869 Q00612;A3KG36 G6pdx Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase yes no 1 0 0 0 1 0 1 45.027 45.027 2 1.4287E-16 13061 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 154.01 114.79 29.904 27.776 0 0 28.291 29.041 28 28 0 0 28 28 1 1 0 0 1 1 23498 599 1869 590 1312 1502 1502 1 AERPDVDEK Unmodified 1057.504 0.50400254 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 6.67 4.5 1 1 1 34.068 34.068 3 0.0010001 9326 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.973 41.699 215.41 257.59 270.72 118.96 334.38 356.1 203 260 260 111 334 343 2 3 2 1 2 3 29811 600 3204 591 1313;1314;1315 1503;1504;1505 1503 3 AESEAETPGTPGEFESK Acetyl (Protein N-term) 1806.7796 0.77956828 1768 P63046 Sult4a1 Sulfotransferase 4A1 yes yes 1 0 0 0 1.5 0.5 1 1 58.395 58.395 2;3 2.3965E-18 18789 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.306 41.169 29.904 27.776 38.365 37.459 122.2 46.604 28 28 37 37 120 46 1 1 1 1 2 1 16615 601 1768 592 1316;1317 1506;1507 1506 2 AESEEGPDVLR Unmodified 1200.5622 0.5622457 3069 Q9D662 Sec23b Protein transport protein Sec23B yes yes 0 0 0 0 1.5 0.5 1 1 44.724 44.724 2 1.0332E-08 12896 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.39 91.667 59.703 55.259 17.904 48.382 102.19 66.374 56 56 19 47 102 65 2 2 1 2 2 2 7234.3 602 3069 593 1318;1319 1508;1509 1508 2 AESEEMETSQAGSK Unmodified 1482.6144 0.61441721 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 2.5 0.5 1 1 39.855 39.855 3 5.8534E-17 11834 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.29 92.761 88.231 61.761 86.738 0 103.06 105.79 83 65 84 0 102 102 2 2 2 0 2 2 12182 603 1957 594 1320;1321 1510;1511 1510 2 AESIIIR Acetyl (Protein N-term) 842.48617 0.48616764 1672 P60670 Nploc4 Nuclear protein localization protein 4 homolog yes yes 1 0 0 0 3 0 1 60.987 60.987 2 0.02542 21694 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.714 44.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1376.8 604 1672 595 1322 1512 1512 1 AESLQQEVEALK Unmodified 1343.6933 0.69325988 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 5 0 1 70.403 70.403 3 3.532E-05 25534 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.189 63.972 49.358 0 0 29.725 46.751 0 46 0 0 28 46 0 1 0 0 1 1 0 6135 605 895 596 1323 1513 1513 1 AESLQVTR Unmodified 902.48214 0.48214489 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7 3.16 1 1 1 1 1 39.447 39.447 2 0.0012924 10863 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.04 77.24 236.78 507.85 419.92 393.43 645.19 523.84 222 490 425 390 639 503 4 4 4 5 5 5 311360 606 1554 597 1324;1325;1326;1327;1328 1514;1515;1516;1517;1518;1519;1520 1515 7 AESNQDPAPR Unmodified 1083.4945 0.49450049 3351 Q9WVI9 Mapk8ip1 C-Jun-amino-terminal kinase-interacting protein 1 yes yes 0 0 0 0 1 0 1 25.974 25.974 2 0.0056347 4850 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.92 50.069 0 0 0 0 28.291 29.041 0 0 0 0 28 28 0 0 0 0 1 1 2479 607 3351 598 1329 1521 1521 1 AESPAGR Unmodified 686.33475 0.33475237 984 F6RJ39;Q9JIX8 Acin1 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 0 3 0 1 21.081 21.081 2 0.058024 3501 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.415 25.104 34.144 21.941 13.659 0 13.962 19.856 32 23 14 0 14 19 1 1 1 0 1 1 3584 608 984 599 1330 1522 1522 1 AESPEEVACR Unmodified 1146.4975 0.49753696 459 Q7TMY8;A2AFQ0;F6XP90 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 2 0 1 36.715 36.715 2 0.010839 10230 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.305 41.15 20.338 0 8.2942 30.11 0 0 19 0 9 28 0 0 1 0 1 1 0 0 1995.5 609 459 600 1331 1523 1523 1 AESTIKPR Unmodified 900.50288 0.50288033 909 E9Q4M4;Q91VN4 Chchd6 MICOS complex subunit Mic25 yes no 0 0 0 1 7 0.816 1 1 1 33.367 33.367 3 0.0041372 7593 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.69 61.03 296.66 323.67 0 59.502 431.61 388.5 278 323 0 56 428 376 3 3 0 1 3 3 20587 610 909 601 1332;1333;1334 1524;1525;1526 1524 3 AESTPEIAEQR Unmodified 1229.5888 0.58879481 1066 Q3MIA8;G3UXW9;Q99LD4;B1ATU4 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 4.4 4.36 1 1 2 1 38.951 38.951 2;3 8.3161E-08 11594 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.89 66.611 89.592 93.117 73.315 117.11 78.393 96.901 84 92 75 112 79 93 3 3 3 4 3 4 30859 611 1066 602 1335;1336;1337;1338;1339 1527;1528;1529;1530;1531 1529 5 AETAANR Unmodified 731.35622 0.3562161 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780;D3Z0L8 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 3.5 0.5 1 1 18.997 18.997 2 0.0060171 2810 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.12 56.054 115.94 100.98 85.944 107.58 0 88.478 109 102 90 102 0 83 2 1 2 1 0 1 10400 612 418;310 603 1340;1341 1532;1533 1532 2 AETAPLPTSVDDTPEVLNR Unmodified 2024.0062 0.006214175 2854 Q99L43;A2AMQ5;Q6PBC0 Cds2 Phosphatidate cytidylyltransferase 2;Phosphatidate cytidylyltransferase yes no 0 0 0 0 3.33 0.471 2 1 64.454 64.454 2;3 0.0014491 22940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.027 34.05 46.834 31.702 44.26 39.276 37.929 30.898 44 34 44 39 39 30 1 2 1 1 1 1 13675 613 2854 604 1342;1343;1344 1534;1535;1536 1536 3 AETECQNTEYQQLLDIK Unmodified 2081.9575 0.95754942 659 CON__P13645 yes yes 0 0 0 0 4 0 1 70.587 70.587 3 7.8401E-06 25582 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.283 64.953 0 26.185 24.814 14.916 0 29.848 0 25 25 15 0 28 0 1 1 1 0 1 10147 + 614 659 605 1345 1537 1537 1 AETEEGPDVLR Unmodified 1214.5779 0.57789577 880 E9Q1S3;Q01405 Sec23a Protein transport protein Sec23A yes no 0 0 0 0 2 0.816 1 1 1 45.993 45.993 2 7.5101E-26 14471 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 183 147.06 148.49 80.285 102.92 84.31 72.762 127.98 139 84 102 84 74 122 3 3 3 3 2 4 27522 615 880 606 1346;1347;1348 1538;1539;1540;1541 1540 4 AETFTFHSDICTLPEK Unmodified 1894.8771 0.87711426 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6.67 0.471 1 2 64.693 64.693 3;4 1.0519E-05 21378 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.91 48.591 108.65 103.12 45.629 70.166 111.77 135.66 102 102 46 65 111 129 3 2 1 2 2 2 11794 616 1321 607 1349;1350;1351 1542;1543;1544 1543 3 AETMTVSSLAIR Unmodified 1277.6649 0.66493664 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 6.5 0.5 1 1 60.094 60.094 2 4.9721E-09 19291 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.18 65.451 48.863 44.894 45.187 36.919 44.084 68.032 46 46 46 37 46 65 1 1 1 1 1 1 5078.3 617 526 609 1352;1353 1545;1546 1546 2 AETPGPQIK Unmodified 939.50255 0.50254598 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 9 4 1 1 44.545 44.545 2 0.0051058 13335 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.615 50.537 0 0 0 71.045 0 49.036 0 0 0 65 0 46 0 0 0 1 0 1 5743.8 618 1207 610 1354;1355 1547;1548 1547 2 AETVSPGEVDAMTLGK Unmodified 1603.7763 0.77633758 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4.5 0.5 1 1 66.479 66.479 3 0.0005111 23808 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.52 34.717 29.856 37.355 0 90.611 63.828 0 28 37 0 84 65 0 1 1 0 2 2 0 7834.2 619 1999 611 1356;1357 1549;1550 1549 2 AETYDFLFK Acetyl (Protein N-term) 1174.5546 0.55464113 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B no no 1 0 0 0 5 0 1 91.573 91.573 2 0.062306 34653 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.878 26.543 9.5302 8.7005 13.933 14.472 0 0 9 9 14 14 0 0 1 1 1 1 0 0 2359.5 620 2785 612 1358 1551 1551 1 AETYEGVYQCTAR Unmodified 1546.6722 0.67220686 331 A0A1W2P7Y9;Q810U4;A0A1W2P814;A0A1W2P6P3 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 4 0 1 47.203 47.203 2 0.00043147 14935 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.92 65.782 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 4887.1 621 331 613 1359 1552 1552 1 AEVAESR Unmodified 760.37153 0.37153181 471 A2AIM4;CON__Q3SX28 Tpm2 yes no 0 0 0 0 2 0 1 26.561 26.561 2 0.027217 5546 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.187 30.692 0 87.274 62.094 67.344 0 0 0 83 65 65 0 0 0 1 1 1 0 0 12114 + 622 471 614 1360 1553 1553 1 AEVASQK Unmodified 731.38137 0.38136821 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 5 0 1 34.22 34.22 2 0.027243 8319 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.47 37.029 29.744 38.123 18.121 0 27.961 38.644 28 38 19 0 28 37 1 1 1 0 1 1 1566.7 623 1250 615 1361 1554 1554 1 AEVCADCSAPDPGWASISR Unmodified 2047.8728 0.87277394 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 4 0 1 60.878 60.878 3 0.00021975 21365 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.964 50.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 624 2046 616 1362 1555 1555 1 AEVCPWEFEPLEQPNAER Unmodified 2199.9895 0.98951825 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 4 0 1 75.311 75.311 3 0.0011403 27809 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.663 41.083 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 3406.4 625 2499 617 1363 1556 1556 1 AEVCSGTGER Unmodified 1064.4557 0.45567214 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 3 0 1 28.432 28.432 2 0.0092961 6646 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.563 33.485 0 20.216 0 20.767 0 9.594 0 19 0 19 0 9 0 1 0 1 0 1 1762.2 626 902 618 1364 1557 1557 1 AEVDVADELLENLAK Unmodified 1627.8305 0.83048164 3041 Q9D1H7;D3Z7S0;D3Z4J5 Get4 Golgi to ER traffic protein 4 homolog yes no 0 0 0 0 4.5 0.5 1 1 93.23 93.23 3 8.0407E-17 34151 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.53 97.23 11.745 0 9.6788 14.954 18.51 26.122 11 0 9 14 19 25 1 0 1 1 1 2 2687.4 627 3041 619 1365;1366 1558;1559 1558 2 AEVEETLK Acetyl (Protein N-term) 959.48114 0.48114184 1728 P62627 Dynlrb1 Dynein light chain roadblock-type 1 yes yes 1 0 0 0 1.5 0.5 1 1 60.398 60.398 2 0.0035111 20945 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.116 61.081 227.19 68.717 169.85 100.88 280.87 153.86 213 74 166 102 278 149 3 2 3 2 3 2 37597 628 1728 620 1367;1368 1560;1561;1562 1561 3 AEVEETLKR Acetyl (Protein N-term) 1115.5823 0.58225287 1728 P62627 Dynlrb1 Dynein light chain roadblock-type 1 yes yes 1 0 0 1 3 0 1 51.68 51.68 2 0.016182 17428 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.166 8.4743 0 0 144.58 130.57 154.33 143.77 0 0 139 130 158 139 0 0 1 1 1 1 47703 629 1728 621 1369 1563 1563 1 AEVENLHR Unmodified 966.48829 0.4882929 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 4 0.816 1 1 1 31.993 31.993 3 0.00070317 7765 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.44 77.825 169 76.114 86.189 37.43 175.08 281.76 158 74 83 37 176 269 3 2 2 1 3 4 51716 630 2014 622 1370;1371;1372 1564;1565;1566;1567 1566 4 AEVENTAL Unmodified 845.41306 0.41306227 3392 Q9Z275 Rlbp1 Retinaldehyde-binding protein 1 yes yes 0 0 0 0 3 0 1 52.509 52.509 2 0.030317 17846 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.138 37.246 0 20.216 0 49.77 27.002 0 0 19 0 46 28 0 0 1 0 1 1 0 5675.3 631 3392 623 1373 1568 1568 1 AEVESLK Unmodified 774.41233 0.41233399 3430 yes no 0 0 0 0 5 0 1 47.521 47.521 2 0.040319 14775 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.116 2.0584 98.661 119.55 88.323 104 118.15 75.513 93 120 93 102 120 74 1 1 1 1 1 1 5007.3 + 632 3430 624 1374 1569 1569 1 AEVLDSTK Unmodified 861.44436 0.4443624 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 47.418 47.418 2;3 0.0053708 13445 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.308 41.59 472.87 247.48 565.41 498.25 192.65 430.5 445 254 559 490 201 409 2 1 2 2 1 2 39510 633 2958 625 1375;1376;1377;1378 1570;1571;1572;1573 1572 4 AEVSELPNVVR Unmodified 1211.651 0.65100113 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 9 4 1 1 56.522 56.522 2 1.8294E-08 19289 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.79 83.975 109.07 45.887 71.949 186.06 107.48 155.77 102 46 74 176 112 149 2 1 2 3 2 3 12197 634 3002 626 1379;1380 1574;1575;1576 1575 3 AEVSQPR Unmodified 785.40317 0.40316629 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 27.345 27.345 2 0.014379 5624 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.6 57.712 237.48 119.2 200.77 133.38 174.96 215.68 223 121 195 130 176 204 3 2 2 3 3 3 113530 635 1876 627 1381;1382;1383;1384 1577;1578;1579;1580;1581 1578 5 AEVSSGSER Unmodified 920.41994 0.41993856 3306 Q9R0Y5;Z4YN97;A0A0A6YXW8 Ak1 Adenylate kinase isoenzyme 1 yes no 0 0 0 0 3.86 3.83 1 3 1 1 1 24.167 24.167 2;3 1.6646E-58 4603 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 223.88 129.89 658.67 599.73 768.32 730.65 1090.5 779.49 620 618 771 723 1098 760 4 7 4 3 5 5 209630 636 3306 628 1385;1386;1387;1388;1389;1390;1391 1582;1583;1584;1585;1586;1587;1588;1589;1590 1584 9 AEVTDEK Unmodified 790.37086 0.37086311 2030;1425 P20444;Q4VA93 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 5.5 4.39 1 1 1 1 37.487 37.487 2 0.010428 10909 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 122.13 24.526 215.65 413.41 368.49 376.72 304.34 425.18 204 408 380 370 315 407 3 4 4 4 3 4 53434 637 1425;2030 629 1392;1393;1394;1395 1591;1592;1593;1594 1592 4 AEVTEGK Unmodified 732.36538 0.3653838 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4.5 0.5 1 1 37.007 37.007 2 0.02695 10161 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.296 15.679 99.275 97.445 176.6 168 212.78 66.963 93 93 176 167 213 65 1 1 2 2 2 1 9350.4 638 1999 630 1396;1397 1595;1596 1595 2 AEVVLGNIIK Unmodified 1054.6386 0.63864553 802 Q3UPV6;E0CXZ9;P62482;E0CXI4 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 0 10.7 1.7 1 1 1 72.004 72.004 2;3 2.2719E-08 23594 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.17 101.95 147.72 126.15 132.35 0 130.32 164.71 139 130 130 0 130 158 1 1 1 0 1 1 16592 639 802 631 1398;1399;1400 1597;1598;1599 1597 3 AEVVTQDVAPNPDDPEDFPALA Unmodified 2309.0699 0.069936644 955 Q9JKS5;E9QKB2 Habp4 Intracellular hyaluronan-binding protein 4 yes no 0 0 0 0 2.5 0.5 1 1 84.244 84.244 3 0.00030205 28799 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 44.415 36.055 0 2 9.738 0 9.414 0 0 2 9 0 9 0 0 1 1 0 1 0 8220.1 640 955 632 1401;1402 1600;1601 1600 2 AEYEFDSPYWDDISDSAK Unmodified 2136.88 0.88001061 2468;2779 Q8BW96;Q91YS8 Camk1d;Camk1 Calcium/calmodulin-dependent protein kinase type 1D;Calcium/calmodulin-dependent protein kinase type 1 no no 0 0 0 0 7.33 4.03 1 1 1 78.451 78.451 3 4.6353E-07 29289 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.714 70.063 125.55 51.636 135.65 101.62 36.718 61.846 118 53 133 101 37 59 3 2 3 3 1 2 25172 641 2468;2779 633 1403;1404;1405 1602;1603;1604 1602 3 AEYGTLLQDLTNNITLEDLEQLK Acetyl (Protein N-term) 2675.3542 0.35415699 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 1 0 0 0 7.75 3.11 1 1 1 1 118.85 118.85 3 1.9377E-22 45241 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.663 40.227 10.651 5.8311 13.512 29.55 7.0557 5.33 10 6 13 29 7 5 3 2 3 5 2 1 13401 642 2143 634 1406;1407;1408;1409 1605;1606;1607;1608;1609 1608 5 AEYLASIFGTEK Acetyl (Protein N-term) 1369.6765 0.67654718 822 E9PWX6;E9PWM2;E9Q809;F8WH71;E9Q5Y2;E9PUZ3;E9Q1I7;E9Q5J3;G3UW94;Q8BGJ9;Q9D883 U2af1l4;U2af1 Splicing factor U2AF 26 kDa subunit;Splicing factor U2AF 35 kDa subunit yes no 1 0 0 0 7 0.816 1 1 1 102.26 102.26 2 5.5516E-09 36928 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.353 27.958 0 0 6.2164 6.1875 7 0 0 0 6 6 7 0 0 0 1 1 1 0 1714.4 643 822 635 1410;1411;1412 1610;1611;1612 1611 3 AEYTEASGPCVLTPHR Unmodified 1786.8308 0.83083277 2240 Q6PDY2 Ado 2-aminoethanethiol dioxygenase yes yes 0 0 0 0 4 0 1 47.268 47.268 3 1.2908E-05 15052 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.208 61.416 30.044 0 0 0 0 29.848 28 0 0 0 0 28 1 0 0 0 0 1 1726.9 644 2240 636 1413 1613 1613 1 AEYVVTK Unmodified 808.43307 0.43306943 3138 Q9DC70 Ndufs7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 48.267 48.267 2 0.01413 15225 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.93 11.014 206.54 218.87 267.89 349.7 490.93 374.56 195 223 269 343 497 362 2 2 2 3 3 2 33203 645 3138 637 1414;1415;1416 1614;1615;1616 1616 3 AFAAGADIK Unmodified 862.45487 0.45486751 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 53.69 53.69 2 0.00047705 16339 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.98 70.826 392.01 625.55 524.13 467.83 507.1 722.21 371 621 538 464 512 689 4 5 4 4 3 4 62904 646 2401 638 1417;1418;1419;1420;1421 1617;1618;1619;1620;1621 1618 5 AFAAQEDLEK Unmodified 1120.5401 0.5400537 1453 P26043 Rdx Radixin yes yes 0 0 0 0 6 0 1 55.332 55.332 3 0.045627 17898 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.419 6.3068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 647 1453 639 1422 1622 1622 1 AFADAMEVIPSTLAENAGLNPISTVTELR Unmodified 3029.538 0.53795179 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 6.5 0.5 1 1 103.52 103.52 3 1.9443E-05 37109 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.695 39.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1781.1 648 1824 640 1423;1424 1623;1624 1624 2 AFAFVTFADDK Unmodified 1230.5921 0.59208927 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WQA5;A0A087WSH7;H3BJV1;A0A087WRP4;A0A087WS74;A0A087WNY6;A0A087WQX8;A0A087WS17 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 9.5 2.06 2 1 1 79.998 79.998 2;3 4.9815E-08 28097 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.63 94.898 118.72 111.8 105.79 88.439 26.959 138.88 111 111 103 84 28 131 2 3 3 3 1 4 17909 649 2793 641 1425;1426;1427;1428 1625;1626;1627;1628;1629 1625 5 AFALGILK Unmodified 831.52182 0.52182486 2251 Q6PHQ8;F6UFC8;E9Q6K7;F7A8R0 Naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes no 0 0 0 0 1 0 1 76.157 76.157 2 0.014055 26200 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.113 58.992 48.891 25.546 56.76 46.074 43.663 68.044 46 28 56 46 46 65 1 1 1 1 1 1 2711.6 650 2251 642 1429 1630 1630 1 AFAVGVQQVLLK Unmodified 1271.7602 0.76015765 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 11 0 2 77.827 77.827 2;3 1.9905E-22 23521 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 163.32 125.76 39.414 105.11 45.671 27.178 37.454 39.442 37 102 46 28 37 37 1 2 1 1 1 1 28013 651 3164 643 1430;1431 1631;1632 1631 2 AFCAENLEEK Unmodified 1209.5336 0.53358811 1145 J3QNU6;Q8BWG8 Arrb1 Beta-arrestin-1 yes no 0 0 0 0 5 0 1 56.602 56.602 2 0.0046174 19135 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.662 48.576 0 0 0 0 47.137 28.503 0 0 0 0 46 28 0 0 0 0 1 1 1827.2 652 1145 644 1432 1633 1633 1 AFCGFEDPR Unmodified 1097.46 0.46002924 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 55.282 55.282 2 0.039087 18498 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.167 32.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 653 3266 645 1433 1634 1634 1 AFCVANK Unmodified 808.39016 0.39015876 409 D4AFX6;A0A338P6P6;Q6ZQK5;A0A2R8W6H4 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 9 0 1 49.318 49.318 2 0.036486 12787 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.1 41.776 0 88.312 0 0 67.99 0 0 83 0 0 65 0 0 1 0 0 1 0 3380.9 654 409 646 1434 1635 1635 1 AFCYMPAGDAQLLLAPSFK Unmodified 2099.022 0.022004356 2615 Q8K406 Lgi3 Leucine-rich repeat LGI family member 3 yes yes 0 0 0 0 9 0 1 90.025 90.025 3 0.0073386 31825 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.203 22.897 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 1037.1 655 2615 647 1435 1636 1636 1 AFDFLSEETEASLASR Unmodified 1771.8265 0.8264589 2039 Q58A65;Z4YMB8;A0A0R4J196;F8WH31;E9PUD1;F6SH61;F6WNT4 Spag9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 0 5 0 1 80.807 80.807 3 0.00020946 30547 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.225 33.586 20.244 28.427 0 0 27.594 49.315 19 28 0 0 28 47 1 1 0 0 1 1 1743.5 656 2039 648 1436 1637 1637 1 AFDLFNPNFK Unmodified 1211.5975 0.597509 1014 F7ARZ1;Q3TI14;Q8VE22;Q5SXC9;A7M7Q8 Mrps23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 10 0 1 80.891 80.891 2 0.029804 25482 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.659 36.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 657 1014 649 1437 1638 1638 1 AFDQGADAIYEHINEGK Unmodified 1876.8592 0.85915601 2644 Q8R1I1 Uqcr10 Cytochrome b-c1 complex subunit 9 yes yes 0 0 0 0 5 0.816 1 1 1 65.472 65.472 3 3.8861E-06 22514 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.447 53.039 157.35 125.4 177.24 200.16 128.02 155.18 148 130 175 195 130 149 3 3 3 4 2 3 54407 658 2644 650 1438;1439;1440 1639;1640;1641;1642 1642 4 AFEDDDITHVEGSVDPIR Unmodified 2013.928 0.92796385 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 3 0 1 64.612 64.612 3 0.020484 23298 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 34.748 20.276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 659 2999 651 1441 1643 1643 1 AFEDELR Unmodified 878.4134 0.41339662 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 3 0 1 50.419 50.419 2 0.027665 16858 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.033 19.285 39.468 46.283 0 60.018 63.245 57.891 37 46 0 56 65 56 1 1 0 1 1 1 7351.4 660 893 652 1442 1644 1644 1 AFEDEMSGR Unmodified 1040.4233 0.42330938 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 3 0 1 46.973 46.973 2 5.412E-12 15223 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 171.75 132.42 196.55 131 217.9 156.27 182.75 439.31 185 139 216 158 196 417 1 1 1 1 1 1 28789 661 2148 653 1443 1645 1645 1 AFEDWLNDDLGSYQGAQENR Unmodified 2327.0091 0.0090677215 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 5 0.816 1 1 1 81.661 81.661 3 9.0359E-12 30963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.67 100.09 29.952 38.285 7.6279 20.312 8.727 57.005 28 38 9 19 9 56 1 2 1 1 1 2 16899 662 3453 654 1444;1445;1446 1646;1647;1648 1647 3 AFEEAEK Unmodified 822.37595 0.37594848 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 7.33 4.03 1 1 1 44.872 44.872 2 0.0089677 13555 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.25 73.021 525.77 206.57 546.45 438.56 745.53 0 494 222 537 431 732 0 3 2 3 2 3 0 41445 663 1875 655 1447;1448;1449 1649;1650;1651 1651 3 AFEEEQQAQWDCVNAK Unmodified 1951.837 0.83704036 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 0 4 0 1 61.925 61.925 3 0.00042723 21864 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.513 41.375 20.244 28.427 0 0 29.288 0 19 28 0 0 28 0 1 1 0 0 1 0 1823.1 664 1896 656 1450 1652 1652 1 AFEGQAHSGK Unmodified 1030.4832 0.48320752 1502 P32037 Slc2a3 Solute carrier family 2, facilitated glucose transporter member 3 yes yes 0 0 0 0 6.5 0.5 1 1 33.15 33.15 3 0.0015256 6674 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.786 42.142 197.07 113.04 144.77 170.39 128.82 204.19 185 121 148 166 130 195 2 2 2 2 1 2 18877 665 1502 657 1451;1452 1653;1654 1654 2 AFELYDQDGNGYIDENELDALLK Deamidation (N) 2645.2021 0.20207303 1359 P12658 Calb1 Calbindin yes yes 0 1 0 0 8.5 4.5 1 1 97.558 97.558 3;4 1.7571E-11 34524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.042 51.144 5.3346 6.0243 0 6.4101 7.8616 6.1717 5 6 0 6 8 6 1 1 0 1 1 1 1321.3 666 1359 658 1453;1454 1655;1656 1655 428 2 AFELYDQDGNGYIDENELDALLK Unmodified 2644.2181 0.21805744 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 5 0 1 95.039 95.039 3 4.6797E-12 35373 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.584 58.992 0 6.2818 6.1151 0 0 0 0 6 6 0 0 0 0 1 1 0 0 0 1577.6 667 1359 658 1455 1657 1657 1 AFFESHPAPSAER Unmodified 1444.6735 0.67352749 1899 Q11011;F6QYF8 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 6.5 0.5 1 1 44.817 44.817 3 0.00014535 12086 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.29 48.036 69.387 116.44 159.93 82.93 98.219 214.66 65 111 158 83 102 204 1 1 2 1 1 2 25652 668 1899 659 1456;1457 1658;1659 1659 2 AFFNAVK Unmodified 795.42792 0.42792448 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 11 0.816 1 1 1 61.771 61.771 2;3 0.0061571 16850 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.22 75.112 814.84 760.9 1069.9 781.56 556.18 1202.6 768 781 1067 774 577 1143 2 2 3 2 1 3 71679 669 2301;365 660 1458;1459;1460 1660;1661;1662 1660 3 AFFPACYGGDGR Unmodified 1316.5608 0.56080592 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 10 2.16 1 1 1 62.452 62.452 2 9.8703E-06 19710 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.88 90.525 118.41 38.757 152.78 99.539 151.05 38.142 111 37 148 102 148 37 2 1 3 3 2 1 11974 670 1201 661 1461;1462;1463 1663;1664;1665;1666 1663 4 AFFPCFDTPAVK Unmodified 1398.6642 0.66420836 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 10 0.816 1 1 1 78.629 78.629 2;3 8.9699E-12 24431 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.26 87.034 49.358 9.0928 28.902 79.896 18.936 89.544 46 9 28 75 19 84 1 1 1 3 1 2 15942 671 2686 662 1464;1465;1466 1667;1668;1669 1668 3 AFFSGSQR Unmodified 898.42972 0.42971539 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 10 0 1 46.405 46.405 2 0.0063253 10269 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.36 70.335 78.781 27.378 81.224 49.706 63.572 62.146 74 32 79 51 65 60 1 1 1 1 1 1 7324.5 672 2408 663 1467 1670 1670 1 AFGAPNVVEDEIDQYLSK Unmodified 1993.9633 0.96328673 1672 P60670 Nploc4 Nuclear protein localization protein 4 homolog yes yes 0 0 0 0 8 3.56 1 1 1 92.545 92.545 3 5.0521E-07 34858 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.502 73.195 5.276 56.655 41.799 4.9241 24.432 64.329 5 54 42 5 24 61 1 2 3 1 1 3 6414 673 1672 664 1468;1469;1470 1671;1672;1673 1671 3 AFGAPVPSVQWLDEEGTTVLQDER Unmodified 2643.2817 0.28166075 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 8 3.56 1 1 1 90.11 90.11 3 1.396E-12 35685 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.21 63.907 9.5993 20.216 9.6896 40.441 19 20.254 9 19 9 37 19 19 1 1 1 1 1 1 10962 674 456 665 1471;1472;1473 1674;1675;1676 1676 3 AFGDVFSVIGVR Unmodified 1265.6768 0.67682195 944 E9QAC6;E9PUZ5;Q62083 Pick1 Galectin;PRKCA-binding protein yes no 0 0 0 0 10 0 1 85.97 85.97 2 8.7959E-06 27512 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.22 62.345 69.451 24.633 28.468 0 0 0 65 28 28 0 0 0 1 1 1 0 0 0 5071.9 675 944 666 1474 1677 1677 1 AFGENAVVQLISLQK Unmodified 1615.8934 0.89335667 2841 Q99KC8;F6TIL5 Vwa5a von Willebrand factor A domain-containing protein 5A yes no 0 0 0 0 10.7 1.7 1 1 1 86.422 86.422 3 8.1342E-06 30237 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.771 56.892 49.885 113.58 190.48 62.27 109.59 175.73 47 111 185 65 111 167 2 2 2 1 2 2 12314 676 2841 667 1475;1476;1477 1678;1679;1680 1678 3 AFGFNVLFYDPYLSDGIER Unmodified 2222.0684 0.068420501 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 11 2 1 1 99.606 99.606 3 1.264E-07 35555 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.475 78.761 0 0 0 0 38.197 19.706 0 0 0 0 38 19 0 0 0 0 2 1 10479 677 114 668 1478;1479 1681;1682 1681 2 AFGFSHLEALLDDSK Unmodified 1648.8097 0.80968662 2293 Q7TQI3;D3YWF6;D3Z7K0 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 9.38 2.29 2 2 1 1 2 81.279 81.279 3;4 2.3492E-07 27956 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.61 74.662 435.11 451.67 504.62 424.2 561.38 260.79 408 460 502 417 560 250 6 10 8 8 8 5 94035 678 2293 669 1480;1481;1482;1483;1484;1485;1486;1487 1683;1684;1685;1686;1687;1688;1689;1690;1691;1692 1689 10 AFGFSHLEALLDDSKELQR Unmodified 2175.096 0.096032235 2293 Q7TQI3;D3YWF6;D3Z7K0 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 1 8.5 0.5 1 1 79.302 79.302 4 4.1525E-10 27833 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.33 78.623 137.99 234.73 305.55 187.43 144.59 400.95 130 232 297 185 148 380 3 4 4 3 2 5 14335 679 2293 670 1488;1489 1693;1694;1695;1696;1697 1694 5 AFGGQSLK Unmodified 806.42865 0.42865276 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 10.5 2.5 1 1 49.678 49.678 2 0.0012216 13866 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.88 61.968 449.66 327.43 430.82 329.73 513.21 209.57 423 343 432 334 512 205 2 2 2 2 2 1 42337 680 2597 671 1490;1491 1698;1699 1698 2 AFGIPVR Unmodified 758.44391 0.44390889 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 0 9 0 1 55.988 55.988 2 0.014071 15966 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.01 37.104 178.15 192.27 191.53 157.71 189.92 198.19 168 195 195 158 195 191 1 1 1 1 1 1 17583 681 78 672 1492 1700 1700 1 AFGLGVAYR Unmodified 952.51305 0.51305109 2289 Q7TPM6 Fsd1 Fibronectin type III and SPRY domain-containing protein 1 yes yes 0 0 0 0 10 0 1 60.36 60.36 2 0.0017517 16202 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.415 75.106 0 118.1 0 111.49 0 118.33 0 111 0 102 0 111 0 1 0 1 0 1 11757 682 2289 673 1493 1701 1701 1 AFGQGGR Unmodified 691.34017 0.3401721 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 0 8 0 1 30.447 30.447 2 0.064793 5248 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.618 36.812 0 0 60.592 0 56.948 47.411 0 0 56 0 56 46 0 0 1 0 1 1 2246.7 683 2612 674 1494 1702 1702 1 AFGYYGPLR Unmodified 1042.5236 0.52361577 1838 P84104 Srsf3 Serine/arginine-rich splicing factor 3 yes yes 0 0 0 0 7.75 3.96 1 1 1 1 61.619 61.619 2 1.0547E-12 16737 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 178.24 140.43 388.59 116.64 414.43 503.33 342.52 700.18 365 120 405 489 362 666 2 1 2 3 2 3 116990 684 1838 675 1495;1496;1497;1498 1703;1704;1705;1706 1705 4 AFHNEAQVNPER Unmodified 1410.664 0.66402543 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 7.33 4.03 1 1 1 34.354 34.354 3 1.0523E-13 8405 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.56 103.26 118.39 61.406 68.563 99.607 108.56 165.33 111 65 65 93 111 158 3 2 1 2 2 3 32246 685 1356 676 1499;1500;1501 1707;1708;1709 1709 3 AFHNEAQVNPERK Unmodified 1538.759 0.75898845 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 1 13 0 1 34.865 34.865 4 0.021919 8958 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.725 18.852 0 69.16 0 50.278 0 88.478 0 65 0 46 0 83 0 1 0 1 0 1 5182.2 686 1356 677 1502 1710 1710 1 AFIANLK Unmodified 775.45922 0.4592246 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 11.5 0.5 1 1 62.576 62.576 2 0.033655 15272 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.454 21.99 139.04 89.577 0 80.882 0 0 130 93 0 74 0 0 1 1 0 1 0 0 12463 687 1083 678 1503;1504 1711;1712 1712 2 AFIITGQTYTR Unmodified 1269.6717 0.67173657 883 E9Q242;P54822;A0A140LHU1;E9Q3T7 Adsl Adenylosuccinate lyase yes no 0 0 0 0 11 0.816 1 1 1 60.573 60.573 2 1.119E-07 16334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.71 74.625 49.053 110.08 27.685 59.558 0 79.95 46 107 28 56 0 75 1 3 1 2 0 2 18467 688 883 679 1505;1506;1507 1713;1714;1715 1713 3 AFIITINSFGTELSK Unmodified 1639.8821 0.88212328 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 8.71 4.92 2 2 2 1 88.688 88.688 2;3;4 8.0167E-27 25187 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 151.9 120.94 181.46 317.2 54.617 152.64 288.86 115.15 170 311 58 142 286 112 4 7 3 3 5 2 70338 689 1606 680 1508;1509;1510;1511;1512;1513;1514 1716;1717;1718;1719;1720;1721;1722;1723;1724;1725 1721 10 AFIITINSFGTELSKEDR Unmodified 2040.0528 0.052770437 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 1 10 0 2 80.912 80.912 3;4 2.0975E-07 25541 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.389 67.351 157.17 124.9 168.61 85.304 77.404 99.138 148 130 167 83 74 93 2 2 2 1 1 1 41770 690 1606 681 1515;1516 1726;1727 1727 2 AFIPAIDSFGFETDLR Unmodified 1797.8938 0.8937506 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 7 0 1 91.645 91.645 3 1.5393E-05 33990 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.692 53.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1055.5 691 464 682 1517 1728 1728 1 AFITNIPFDVK Unmodified 1263.6863 0.68632401 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 10.8 1.48 1 1 1 1 81.436 81.436 3 0.00014681 25674 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.855 62.045 0 37 127.7 48.019 67.99 115.7 0 37 120 46 65 112 0 1 2 1 1 2 43232 692 3020 683 1518;1519;1520;1521 1729;1730;1731;1732 1730 4 AFITVLEMTPVLGTEIINYR Unmodified 2279.2235 0.22354093 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 10.8 1.48 1 1 1 1 108.08 108.08 3 7.9117E-23 33919 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.45 111.02 11.333 5 5.3831 0 3.138 0 11 5 5 0 3 0 2 1 1 0 1 0 9806.7 693 416 684 1522;1523;1524;1525 1733;1734;1735;1736;1737;1738 1734 6 AFLADPSAFAAAAPAAAATTAAPAAAAAPAK Unmodified 2695.397 0.39696528 1381 P14869 Rplp0 60S acidic ribosomal protein P0 yes yes 0 0 0 0 10 2.16 1 1 1 81.46 81.46 4;5 4.1754E-13 31561 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.701 50.088 79.08 91.828 46.784 67.086 62.26 146.4 74 93 46 65 65 139 1 2 1 1 1 2 45902 694 1381 685 1526;1527;1528 1739;1740;1741 1741 3 AFLDFHSLPYQVVEVNPVR Unmodified 2229.1582 0.15823856 2470 Q8BWM0 Ptges2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 0 9 0 1 82.72 82.72 3 1.2401E-05 28546 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.346 44.793 20.186 18.553 18.043 29.18 18.534 0 19 19 19 28 19 0 1 1 1 1 1 0 3074.9 695 2470 686 1529 1742 1742 1 AFLDSLPDVK Unmodified 1103.5863 0.58627561 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 10 3 1 1 74.98 74.98 2;3 0.0010218 26298 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.111 51.662 39.385 16.911 88.593 0 85.879 57.813 37 19 83 0 84 56 1 1 2 0 2 1 6469.9 696 2543 687 1530;1531 1743;1744 1743 2 AFLEENQLDYIIR Unmodified 1622.8304 0.83042206 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 8 3.56 1 1 1 80.06 80.06 2;3 1.211E-49 29481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 203.8 158.98 80.019 109.22 17.506 19.724 57.53 33.046 75 108 19 19 55 31 2 3 1 1 2 1 15668 697 2080 688 1532;1533;1534 1745;1746;1747 1746 3 AFLFDVVSK Unmodified 1024.5593 0.55933258 601 B1AWT4;B1AWT2;B1AWT3;Q99K70;Q7TT45 Rragd;Rragc Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 0 11 0 1 80.552 80.552 3 0.0031148 24909 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.735 33.635 49.014 0 57.772 57.765 0 0 46 0 56 56 0 0 1 0 1 1 0 0 3217.8 698 601 689 1535 1748 1748 1 AFLFQESPR Unmodified 1093.5556 0.55564418 396 A0A2R8VHV8;Q8BM06;Q61220 Nell2 Protein kinase C-binding protein NELL2 yes no 0 0 0 0 9 0 1 62.876 62.876 2 0.0063759 19295 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.455 55.201 44.451 44.853 65.402 45.178 63.927 57.872 42 46 65 46 65 56 1 1 1 1 1 1 6563.7 699 396 690 1536 1749 1749 1 AFLHIPAK Unmodified 895.52797 0.52797287 1342 P10493 Nid1 Nidogen-1 yes yes 0 0 0 0 11.5 0.5 1 1 56.099 56.099 3 0.0070548 12715 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.344 43.958 49.358 145.77 127.45 100.21 252.08 170.83 46 139 130 102 251 167 1 1 1 1 2 2 22320 700 1342 691 1537;1538 1750;1751 1751 2 AFLINGYTSMDLLK Deamidation (N) 1585.8062 0.80618115 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R235;K4DI73 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 1 0 0 8 0 1 89.647 89.647 3 0.0025324 32469 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.841 26.513 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 701 3447 692 1539 1752 1752 1158 1 AFLLMVSQYQQPQENEVAVLLKPISEK Unmodified 3101.6471 0.64710831 2996 Q9CYT6;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2 yes no 0 0 0 1 11.5 0.5 2 2 95.786 95.786 4;5 1.4118E-23 31174 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.45 95.728 24.554 14.155 8.9399 49.406 18.032 9.594 23 15 9 46 19 9 2 2 1 2 1 1 24840 702 2996 693 1540;1541;1542;1543 1753;1754;1755;1756 1754 4 AFLQGGQEATDIALLLR Unmodified 1814.989 0.98904797 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 10 3 1 1 88.412 88.412 3 3.6632E-06 32686 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.279 55.998 50.431 0 0 0 45.781 67.984 47 0 0 0 46 65 1 0 0 0 2 2 6963.7 703 895 694 1544;1545 1757;1758 1757 2 AFLTLAEDILR Unmodified 1260.7078 0.70778773 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 10.7 1.49 2 1 1 1 1 97.858 97.858 2;3 3.9666E-20 31951 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 174.41 109.76 74.62 57.206 59.181 121.94 210.17 58.35 70 56 56 116 209 56 4 3 2 4 6 2 71947 704 1684 695 1546;1547;1548;1549;1550;1551 1759;1760;1761;1762;1763;1764;1765;1766;1767 1761 9 AFLVGIVVPDPEVMPSWAQK Unmodified 2182.1496 0.14964771 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;F6WYN6 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 10 0 1 98.186 98.186 3 7.3258E-07 32131 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.691 45.326 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1015.8 705 2753 696 1552 1768 1768 1 AFLVIADSLQQK Unmodified 1331.7449 0.74490152 932 E9Q8I9 Fry Protein furry homolog yes yes 0 0 0 0 11 0 1 82.732 82.732 3 9.6814E-05 25908 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.143 47.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 706 932 697 1553 1769 1769 1 AFMTADLPNELIELLEK Unmodified 1946.0071 0.0070657979 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.67 2.21 1 1 1 2 1 109.1 109.1 3;4 2.909E-34 36924 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.39 134.25 70.457 43.387 50.247 35.696 43.995 45.371 66 44 49 35 44 43 6 6 6 5 4 5 42862 707 2185 698 1554;1555;1556;1557;1558;1559 1770;1771;1772;1773;1774;1775;1776;1777;1778 1775 9 AFMTADLPNELIELLEK Oxidation (M) 1962.002 0.00198042 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 1 0 7.5 0.5 1 1 103.84 103.84 3 0.00019895 37169 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.231 63.87 0 5.0719 14.844 0 14.145 14.52 0 5 14 0 14 14 0 1 1 0 1 1 2886.5 708 2185 698 1560;1561 1779;1780 1779 167 2 AFNDPFIQK Unmodified 1078.5447 0.54474515 2137 Q61699;E9Q0U7;D3Z027 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 10 3 1 1 67.015 67.015 3 0.0016065 22640 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.677 18.432 137.88 155.42 139.24 25.534 169.61 113.49 130 157 139 28 167 111 2 2 2 1 2 2 14114 709 2137 699 1562;1563 1781;1782 1781 2 AFNNKGDGPYSLVAVINSAQDAPSEAPTEVGVK Unmodified 3344.6525 0.65246428 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 8 0 1 79.811 79.811 5 7.1797E-10 27879 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.427 46.719 49.128 45.631 0 19.682 57.672 0 46 46 0 19 56 0 1 1 0 1 1 0 3342.9 710 1362 700 1564 1783 1783 1 AFPAWADTSILSR Unmodified 1433.7303 0.73031409 3170 Q9EQ20;A0A1Y7VJ32 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes no 0 0 0 0 9.8 1.72 1 2 1 1 78.149 78.149 2;3 5.5178E-23 29859 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.84 114.39 188.64 150.02 88.901 122.6 165.28 109.92 177 149 84 114 167 105 5 3 2 3 4 2 66110 711 3170 701 1565;1566;1567;1568;1569 1784;1785;1786;1787;1788 1788 5 AFPCWDEPAIK Unmodified 1332.6173 0.61725816 1899 Q11011;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 7 0 1 71.611 71.611 2 0.0015555 24630 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.807 59.293 29.732 17.583 37.566 28.365 0 29.848 28 19 37 28 0 28 1 1 1 1 0 1 3458.8 712 1899 702 1570 1789 1789 1 AFPFHIIFDR Unmodified 1261.6608 0.66077796 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 11 0.816 1 1 1 76.405 76.405 3 0.00043367 23443 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.898 54.677 20.387 0 0 49.604 0 0 19 0 0 47 0 0 1 0 0 2 0 0 21037 713 1221 703 1571;1572;1573 1790;1791;1792 1790 3 AFPNPYADYNK Unmodified 1298.5932 0.5931519 1292 O89112;B2KGR2 Lancl1 LanC-like protein 1 yes no 0 0 0 0 8.5 0.5 1 1 61.716 61.716 2 0.0034221 19359 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.066 40.496 39.406 0 49.573 0 38.702 0 37 0 46 0 37 0 1 0 1 0 1 0 6594.7 714 1292 704 1574;1575 1793;1794 1793 2 AFPSYFSK Unmodified 945.45962 0.45961853 2913 Q9CQ69 Uqcrq Cytochrome b-c1 complex subunit 8 yes yes 0 0 0 0 11 1.58 1 1 1 1 65.438 65.438 2 0.0042012 20536 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.27 55.795 552.21 592.19 1011.5 486.78 734.56 939.51 519 604 988 493 745 901 4 5 5 4 4 5 221740 715 2913 705 1576;1577;1578;1579 1795;1796;1797;1798;1799;1800 1796 6 AFPTQTAGTFK Unmodified 1167.5924 0.59242362 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 10.5 2.5 1 1 57.779 57.779 2;3 1.9119E-26 17549 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 187.42 116.89 0 29.278 30.74 47.759 36.508 0 0 28 32 46 37 0 0 1 1 1 1 0 7194.1 716 607 706 1580;1581 1801;1802 1801 2 AFQATQQK Unmodified 920.47158 0.4715802 2718 Q8VHL1 Setd7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 0 10.5 2.5 1 1 40.747 40.747 2 0.010729 9546 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.311 33.469 29.577 36.581 47.428 0 0 39.442 28 37 46 0 0 37 1 1 1 0 0 1 4216.8 717 2718 707 1582;1583 1803;1804 1803 2 AFQFVETHGEVCPANWTPESPTIKPSPTASK Unmodified 3412.6398 0.6397911 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 1 7.5 0.5 1 1 69.67 69.67 4;5 1.2251E-18 23970 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.297 64.14 59.76 65.13 0 9.2942 106.27 0 56 65 0 9 102 0 1 1 0 1 2 0 13309 718 1422 708 1584;1585 1805;1806 1805 2 AFQINTFNLK Unmodified 1194.6397 0.63970816 1396 P17047 Lamp2 Lysosome-associated membrane glycoprotein 2 yes yes 0 0 0 0 10.5 0.5 1 1 73.259 73.259 3 1.1453E-05 22118 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.55 68.987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 719 1396 709 1586;1587 1807;1808 1807 2 AFQSGQDPSK Unmodified 1063.4934 0.49343786 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 41.421 41.421 2 0.012289 11380 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.184 27.889 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 1 0 1 0 2229.1 720 3449;3451 710 1588 1809 1809 1 AFQSHLK Unmodified 829.44464 0.44463717 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 9 0 1 39.955 39.955 3 0.019866 8862 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.246 25.201 650.8 0 988.14 697.46 0 1034 612 0 945 692 0 970 1 0 1 1 0 1 37889 721 927 711 1589 1810 1810 1 AFSCISACGPRPGR Unmodified 1534.7133 0.71330059 648 CON__O43790;CON__Q14533 yes no 0 0 0 1 10.5 0.5 1 1 45.164 45.164 3 0.00011324 9835 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.815 31.993 54.409 25.603 31.095 38.588 0 208.94 51 28 32 37 0 196 1 1 1 1 0 1 10320 + 722 648 712 1590;1591 1811;1812 1811 2 AFSDPFVEAEK Unmodified 1238.5819 0.58191851 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 5.33 0.471 2 1 69.16 69.16 2;3 9.1222E-13 24356 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143.5 105.81 99.372 131.62 143.17 292.59 269.17 299.33 93 130 139 279 278 288 2 3 1 3 3 4 37346 723 1957 713 1592;1593;1594 1813;1814;1815;1816 1816 4 AFSFLNEVK Unmodified 1053.5495 0.54949617 1805 P70280 Vamp7 Vesicle-associated membrane protein 7 yes yes 0 0 0 0 9 0 1 74.738 74.738 2 0.023673 24807 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.765 16.134 0 47.865 64.525 65.85 71.74 76.837 0 46 65 65 74 74 0 1 1 1 1 1 5961.6 724 1805 714 1595 1817 1817 1 AFSGLNSLEQLTLEK Unmodified 1648.8672 0.8672015 563 A9DA50;Q9D1T0 Lingo1 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 yes no 0 0 0 0 7.5 0.5 1 1 84.823 84.823 3 8.8684E-05 30271 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.729 47.531 99.649 27.776 40.034 40.441 58.576 39.442 93 28 37 37 56 37 2 1 1 1 2 1 4466.3 725 563 715 1596;1597 1818;1819;1820 1820 3 AFSGSGNR Unmodified 794.36712 0.36711513 1810 P70362 Ufd1l Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 0 6.5 0.5 1 1 28.171 28.171 2 0.025164 5174 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.189 43.254 50.036 40.781 31.902 68.116 54.632 23.742 47 42 32 65 56 23 2 2 1 2 2 1 2934 726 1810 716 1598;1599 1821;1822 1821 2 AFSGYLGPDESK Unmodified 1269.5877 0.58773217 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2 Esd S-formylglutathione hydrolase yes no 0 0 0 0 7 0 1 61.039 61.039 3 0.00047219 19755 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.498 33.551 0 0 49.772 0 0 59.696 0 0 46 0 0 56 0 0 1 0 0 1 6476.3 727 1122 717 1600 1823 1823 1 AFSIQGAPSDSGPLR Unmodified 1501.7525 0.75250609 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 8.33 2.29 1 2 1 1 1 60.439 60.439 2;3 2.6269E-37 20371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 179.67 145.81 128.57 148.89 155.09 170.77 171.37 193.39 121 148 157 167 176 186 3 3 3 4 4 4 82450 728 90 718 1601;1602;1603;1604;1605;1606 1824;1825;1826;1827;1828;1829 1824 6 AFSTSVSK Unmodified 825.42323 0.42323303 839 Q8C0C7;E9PWY9 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 0 8.5 0.5 1 1 47.711 47.711 2 0.014947 12039 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.498 52.562 172.18 138.96 158.5 73.078 95.364 209.41 162 144 158 74 98 199 3 3 3 2 2 3 6867.9 729 839 719 1607;1608 1830;1831;1832 1831 3 AFSTWLK Unmodified 851.45414 0.45413923 1452 P26041 Msn Moesin yes yes 0 0 0 0 11 0 1 69.507 69.507 2 0.027467 19896 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.887 25.543 0 0 0 196 0 0 0 0 0 196 0 0 0 0 0 1 0 0 19836 730 1452 720 1609 1833 1833 1 AFSVFLFNTENK Unmodified 1415.7085 0.70851601 1092 G3XA48;P58044;H3BLP1;H3BLF8;H3BKD7 Idi1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 0 11.5 0.5 1 1 83.862 83.862 2;3 2.397E-23 26172 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 169.82 127.84 0 23 0 0 0 0 0 23 0 0 0 0 0 1 0 0 0 0 11262 731 1092 721 1610;1611 1834;1835 1834 2 AFSWASVTSK Unmodified 1082.5397 0.53965977 1847 P97379 G3bp2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 0 11 1 1 1 68.027 68.027 2 5.3008E-08 16991 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 142.98 82.463 9.477 0 127.58 73.896 121.55 47.239 9 0 121 74 121 46 1 0 2 1 2 1 13466 732 1847 722 1612;1613 1836;1837 1837 2 AFSYYGPLR Unmodified 1072.5342 0.53418046 2426 Q8BL97 Srsf7 Serine/arginine-rich splicing factor 7 yes yes 0 0 0 0 9.5 0.5 1 1 61.384 61.384 2 5.7965E-06 18561 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 155.82 97.391 202.81 55.998 131.47 158.22 295.03 0 190 60 125 148 289 0 2 1 1 1 2 0 34210 733 2426 723 1614;1615 1838;1839 1838 2 AFTATLSLFPYHK Unmodified 1494.7871 0.78710068 435 A6PWC3;A2A9Q2;Q8BHG1 Nrd1 Nardilysin yes no 0 0 0 0 12 0 1 75.856 75.856 3 8.4094E-05 20143 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.435 48.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 734 435 724 1616 1840 1840 1 AFTGEGQK Unmodified 836.40283 0.40283194 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6.5 0.5 1 1 41.456 41.456 2 0.017341 11342 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.165 35.192 0 146.66 73.666 155.84 81.527 166.1 0 139 74 148 83 158 0 2 1 2 1 2 15504 735 3000 725 1617;1618 1841;1842 1841 2 AFTNPEDACSFITSANFPALVVK Unmodified 2498.2152 0.21516109 2183 Q64737;A0A338P6X4;D6RCG1 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 9 0 1 91.783 91.783 4 0.00015336 32525 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.353 30.761 0 29.792 0 20.767 0 0 0 28 0 19 0 0 0 1 0 1 0 0 2739 736 2183 726 1619 1843 1843 1 AFVAGVLPLK Unmodified 1013.6274 0.62735256 754 D3Z263;Q9D7H3 Rtca;RtcA RNA 3'-terminal phosphate cyclase yes no 0 0 0 0 8 4.97 1 1 1 76.427 76.427 2;3 0.00067536 20316 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.548 39.564 20.292 18.848 0 70.002 55.466 77.301 19 19 0 65 56 74 1 1 0 2 1 2 12297 737 754 727 1620;1621;1622 1844;1845;1846 1846 3 AFVEFLTDEIKEEK Unmodified 1696.856 0.85596811 2676 Q8R5L1;O35658 C1qbp Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 1 8.29 2.12 1 2 2 1 1 85.868 85.868 3;4 8.2439E-08 31514 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.37 84.375 100.14 150.97 200.57 100.73 263.3 86.903 94 149 195 102 259 84 3 4 5 3 5 2 33986 738 2676 728 1623;1624;1625;1626;1627;1628;1629 1847;1848;1849;1850;1851;1852;1853;1854 1850 8 AFVGNQLPFIGFTYFR Unmodified 1875.9672 0.96719031 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 6.5 5.5 1 1 98.233 98.233 2;3 3.1275E-05 27422 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.499 49.513 12.763 13.916 7.1269 5.465 14.402 7.051 12 14 7 5 14 7 2 2 1 1 1 1 1084.1 739 347 729 1630;1631 1855;1856;1857 1857 3 AFVHWYVGEGMEEGEFSEAR Unmodified 2329.011 0.010981977 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 7.4 2.44 2 6 2 2 1 2 81.662 81.662 3;4 1.6145E-38 24693 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.99 133.18 697.45 511.16 638.33 372.75 602.44 648.38 658 516 618 358 599 619 20 14 15 12 15 15 363780 740 44;1313;1794;3223 730 1632;1633;1634;1635;1636;1637;1638;1639;1640;1641;1642;1643;1644;1645;1646 1858;1859;1860;1861;1862;1863;1864;1865;1866;1867;1868;1869;1870;1871;1872;1873;1874;1875;1876;1877;1878;1879;1880;1881;1882;1883;1884;1885;1886;1887 1876 30 AFVHWYVGEGMEEGEFSEAR Oxidation (M) 2345.0059 0.005896599 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 1 0 8.67 3.09 1 1 1 66.301 66.301 3 2.9078E-08 23116 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.118 69.614 0 0 156.88 73.124 102.35 28.551 0 0 148 74 102 28 0 0 3 2 3 1 39726 741 44;1313;1794;3223 730 1647;1648;1649 1888;1889;1890 1888 0 3 AFVPAILFK Unmodified 1004.6059 0.60588884 518 A2AT37 Upf2 yes yes 0 0 0 0 1 0 1 86.022 86.022 2 0.016229 30614 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.422 32.541 50.309 0 20.456 20.056 86.943 0 47 0 19 19 84 0 2 0 1 1 2 0 2544.2 742 518 731 1650 1891;1892 1892 2 AFYLGSMLIK Unmodified 1141.6206 0.62055263 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R2E3;A0A140T8U6 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 3.88 4.99 6 1 1 85.273 85.273 2;3 1.7677E-08 29632 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.51 94.342 101.25 51.562 110.45 111.72 94.177 118.08 95 56 106 111 93 112 4 4 4 4 3 5 17597 743 3447 732 1651;1652;1653;1654;1655;1656;1657;1658 1893;1894;1895;1896;1897;1898;1899;1900;1901;1902 1893 10 AFYNNVLGEYEEYITK Unmodified 1951.9204 0.92035928 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 87.484 87.484 3 4.3244E-05 34342 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.754 66.954 77.625 6.5094 78.874 27.036 0 40.508 75 9 76 28 0 38 2 1 3 2 0 2 12707 744 1489 733 1659;1660;1661;1662 1903;1904;1905;1906 1906 4 AFYQQPDADTIGYVASEEAFVK Unmodified 2448.1485 0.14852132 2197 Q6IRU5 Cltb Clathrin light chain B yes yes 0 0 0 0 8.17 3.48 2 1 1 2 82.234 82.234 3;4;5 5.1987E-16 31848 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.837 71.962 228.09 34.55 47.713 168.86 111.01 194.92 213 37 47 159 111 187 5 1 1 5 2 5 79902 745 2197 734 1663;1664;1665;1666;1667;1668 1907;1908;1909;1910;1911;1912 1912 6 AFYVPAQYVK Unmodified 1184.623 0.62299547 42 S4R1B0;S4R203;S4R248;A0A0A0MQ95;B2RUJ8;S4R221;Q8C0D4 Arhgap12 Rho GTPase-activating protein 12 yes no 0 0 0 0 10 0 1 67.784 67.784 2 0.00012279 19470 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.72 34.962 0 0 0 39.925 27.454 0 0 0 0 37 28 0 0 0 0 1 1 0 2225.1 746 42 735 1669 1913 1913 1 AGAAFDPVSFAR Unmodified 1207.5986 0.59857163 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 0 0 0 0 8.75 2.49 2 1 1 65.036 65.036 2;3 0.00011322 21620 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.775 54.108 276.84 406.64 526.92 304.35 319.31 435.3 261 408 520 307 317 413 3 4 3 2 3 2 105590 747 2638 736 1670;1671;1672;1673 1914;1915;1916;1917 1915 4 AGADIIITYFAPQLLK Unmodified 1732.9764 0.97635802 1343 P10518 Alad Delta-aminolevulinic acid dehydratase yes yes 0 0 0 0 12 0.816 1 1 1 99.382 99.382 3 5.8083E-06 28300 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.17 76.832 20.387 10.463 10.572 50.722 59.102 69.337 19 10 11 48 60 66 1 1 1 3 2 2 8678.6 748 1343 737 1674;1675;1676 1918;1919;1920;1921 1919 4 AGAEPAPER Unmodified 896.43519 0.4351947 406 A0A338P699;Q6S9I0 Kng2 yes no 0 0 0 0 1.5 0.5 1 1 27.159 27.159 2 0.0018502 5407 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.635 62.279 20.319 13.526 0 75.163 71.642 67.246 19 14 0 70 74 65 1 1 0 2 2 2 8211.4 749 406 738 1677;1678 1922;1923 1922 2 AGAESDGQFQFTGIK Unmodified 1554.7314 0.7314363 2273 Q78IK2 Usmg5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 0 6 0 1 63.911 63.911 3 2.7628E-05 21854 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.834 59.402 118.41 50.364 73.939 56.343 24.344 68.595 111 56 74 56 28 65 1 1 1 1 1 1 7152.4 750 2273 739 1679 1924 1924 1 AGAGAVVPK Unmodified 768.44939 0.4493882 3138 Q9DC70 Ndufs7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 43.16 43.16 2 0.0037037 12743 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.369 55.291 147.84 220.95 316.19 238.77 308.28 298.21 139 222 315 241 315 288 2 3 3 3 3 3 68563 751 3138 740 1680;1681;1682;1683 1925;1926;1927;1928 1928 4 AGAGEGGGGGGGGR Unmodified 1015.4431 0.44313362 2608 Q8K394 Plcl2 Inactive phospholipase C-like protein 2 yes yes 0 0 0 0 2.5 0.5 1 1 18.07 18.07 2 0.00044095 2765 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.096 47.173 6.438 14.896 0 0 24.603 14.58 6 14 0 0 24 14 1 1 0 0 2 1 1598.4 752 2608 741 1684;1685 1929;1930 1929 2 AGAGGPLYGDGYGFR Unmodified 1456.6735 0.67352749 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 0 6.5 0.5 1 1 59.971 59.971 2 0.00042812 20092 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.05 74.907 49.865 45.704 56.325 28.597 37.758 19.706 47 47 56 28 38 19 2 2 2 1 2 1 6162.4 753 573 742 1686;1687 1931;1932 1931 2 AGAGSATLSMAYAGAR Unmodified 1453.6984 0.69836203 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 8.56 3.44 1 1 1 1 1 1 1 1 1 53.15 53.15 2;3 1.5364E-90 15372 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 219.43 189.68 278.12 218.6 193.53 301.22 170 273.21 261 222 194 286 174 260 7 6 6 6 4 5 94983 754 1327 743 1688;1689;1690;1691;1692;1693;1694;1695;1696 1933;1934;1935;1936;1937;1938;1939;1940;1941 1936 9 AGAHLKGGAK Unmodified 908.5192 0.5191991 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 9.5 0.5 1 1 34.734 34.734 4 0.0015031 5778 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.827 57.584 88.19 101.58 146.85 151.53 78.567 194.97 83 102 148 148 83 185 1 1 2 2 1 2 8681 755 1395;3448 744 1697;1698 1942;1943 1943 2 AGASTQGPR Unmodified 843.41988 0.41987898 2109 Q61097;Q5SXE4;A0A2I3BR95;A0A140LHS5;Q5SXE2 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 0 4.5 0.5 1 1 21.844 21.844 2 0.017251 3484 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.507 29.555 0 14.657 14.269 0 33.695 23.974 0 14 14 0 33 23 0 1 1 0 2 1 2839.1 756 2109 745 1699;1700 1944;1945 1944 2 AGATSEGVLANFFNSLLSK Unmodified 1924.9894 0.9894419 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 11.4 1.02 1 2 1 1 102.47 102.47 3;4 8.1204E-28 33168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 142.72 117.4 25.161 83.469 7.1247 30.604 13.598 74.62 24 82 7 28 13 70 3 4 1 1 1 3 28562 757 2646 746 1701;1702;1703;1704;1705 1946;1947;1948;1949;1950;1951;1952;1953 1946 8 AGAVDVVR Unmodified 785.43955 0.43955179 1215;854 O35954;Q6ZPQ6;E9PYJ7 Pitpnm1;Pitpnm2 Membrane-associated phosphatidylinositol transfer protein 1;Membrane-associated phosphatidylinositol transfer protein 2 no no 0 0 0 0 5 0 1 39.886 39.886 2 0.032763 11037 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.69 41.792 59.613 0 79.767 0 0 59.696 56 0 74 0 0 56 1 0 1 0 0 1 4537.7 758 1215;854 747 1706 1954 1954 1 AGAVDWTDQLGLR Unmodified 1400.7048 0.70482762 1658 Z4YJL4;P58871 Tnks1bp1 182 kDa tankyrase-1-binding protein yes no 0 0 0 0 6 0 1 71.775 71.775 3 0.013007 25634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.159 28.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 759 1658 748 1707 1955 1955 1 AGAYDFPSPEWDTVTPEAK Unmodified 2079.9426 0.94255129 1475;1355;2818;103 P11798;F8WIS9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;Q923T9;A0A2I3BQP6;A0A286YDL6;A0A286YCB8 Camk2a;Camk2b;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 7.1 3.18 2 2 2 1 1 2 75.203 75.203 3;4 2.7499E-14 28341 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.01 101.36 1079.3 789.1 1209.8 756.47 583.71 1233.2 1015 805 1195 745 594 1168 12 9 14 12 8 14 760980 760 1355;1475;103;2818 749 1708;1709;1710;1711;1712;1713;1714;1715;1716;1717 1956;1957;1958;1959;1960;1961;1962;1963;1964;1965;1966;1967;1968;1969;1970;1971;1972 1970 17 AGCECLNESDEHGFDNCLR Unmodified 2281.8787 0.87866395 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 3 0 1 48.764 48.764 3 6.5336E-06 16130 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.418 62.968 9.5466 0 18.552 19.661 0 9.594 9 0 18 19 0 9 1 0 1 1 0 1 2169.8 761 2525 750 1718 1973 1973 1 AGCIPEEK Acetyl (Protein N-term) 944.42733 0.42733213 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 1 0 0 0 2 0 1 50.848 50.848 2 0.028432 16519 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.281 20.26 0 145.36 151.41 0 91.583 165.81 0 139 148 0 93 158 0 1 1 0 1 1 42279 762 2302 751 1719 1974 1974 1 AGCPPGNPTAGR Unmodified 1153.5298 0.52984014 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 5 0 1 31.601 31.601 2 0.0011446 7056 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.908 40.654 0 0 14.956 4.3078 14.13 9.1908 0 0 14 5 14 9 0 0 1 1 1 1 1137.6 763 1506 752 1720 1975 1975 1 AGDAPSEEK Unmodified 902.39814 0.39814049 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 5.5 4.39 1 1 1 1 33.573 33.573 2;3 3.6126E-05 8842 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 134.77 71.286 609.23 642.89 838.23 1097.9 1962.4 796.8 574 656 852 1084 1937 800 3 4 3 4 2 3 136300 764 1318 753 1721;1722;1723;1724 1976;1977;1978;1979 1976 4 AGDEFVEK Unmodified 893.41306 0.41306227 2127 Q61425 Hadh Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 49.514 49.514 2 0.0067476 16045 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.47 27.286 0 96.535 144.61 0 0 118.33 0 93 139 0 0 111 0 1 1 0 0 1 7600.9 765 2127 754 1725;1726 1980;1981 1981 2 AGDELTK Unmodified 732.36538 0.3653838 2133;3350 Q61644;Q9WVE8;A0A2R8W6S4;A0A338P6P7 Pacsin1;Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 1;Protein kinase C and casein kinase substrate in neurons protein 2 no no 0 0 0 0 7 3.54 1 1 1 1 41.389 41.389 2 0.016214 11436 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 62.813 1344.4 664.99 1424.3 1178.1 957.3 1300.9 1264 697 1408 1172 975 1246 4 3 4 4 2 4 180730 766 2133;3350 755 1727;1728;1729;1730 1982;1983;1984;1985 1984 4 AGDEPVPR Unmodified 839.41373 0.41373097 901 E9Q5L4;E9Q3Y7;Q5PR69 C530008M17Rik;Kiaa1211 Uncharacterized protein KIAA1211 yes no 0 0 0 0 2 0 1 32.594 32.594 2 0.03702 8256 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.915 9.7097 20.207 0 30.194 0 0 39.442 19 0 28 0 0 37 1 0 1 0 0 1 2437.8 767 901 756 1731 1986 1986 1 AGDIDAK Unmodified 688.33917 0.33916905 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 5 1 1 1 39.883 39.883 2 0.025583 11507 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.45 42.892 524.48 535 123.35 406.84 601.55 153.5 492 538 120 380 598 148 2 2 1 1 2 1 55740 768 3355 757 1732;1733 1987;1988 1987 2 AGDIITVLEQHPDGR Unmodified 1619.8267 0.82673367 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 6 0 1 67.296 67.296 3 2.0422E-05 23441 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.53 83.664 20.387 0 0 20.767 0 20.254 19 0 0 19 0 19 1 0 0 1 0 1 3422.4 769 2226 758 1734 1989 1989 1 AGDLGVDLTSK Unmodified 1074.5557 0.55570376 3155 Q9DCW4;A0A0U1RQB4;A0A0U1RNK9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 8 2.92 2 1 1 61.645 61.645 2;3 0.00088587 21803 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.653 50.944 89.24 64.209 164.31 52.64 113.73 89.029 84 65 158 56 112 84 2 1 3 2 2 2 13949 770 3155 759 1735;1736;1737;1738 1990;1991;1992;1993 1993 4 AGDLPDRDTWK Unmodified 1272.6099 0.6098646 1496 P31648 Slc6a1 Sodium- and chloride-dependent GABA transporter 1 yes yes 0 0 0 1 6 0 1 50.237 50.237 3 0.0647 15441 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.991 12.763 127.95 78.513 70.071 104.19 166 113.59 120 83 74 102 167 111 1 1 1 1 1 1 6963.5 771 1496 760 1739 1994 1994 1 AGDLVFAK Unmodified 819.44905 0.44905385 3252 Q9JMG7 Hdgfrp3 Hepatoma-derived growth factor-related protein 3 yes yes 0 0 0 0 10.5 2.5 1 1 60.629 60.629 2 0.00073787 19192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.6 49.564 167.85 103.52 195.28 0 213.38 0 158 111 187 0 204 0 1 1 1 0 1 0 17457 772 3252 761 1740;1741 1995;1996 1995 2 AGDREDITEPAICALR Unmodified 1785.8679 0.86794655 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 1 3.5 0.5 1 1 53.886 53.886 3 1.6558E-07 18510 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.62 90.41 0 117.6 93.665 98.387 88.394 195.75 0 112 93 93 92 186 0 3 2 2 2 3 17447 773 1878 762 1742;1743 1997;1998;1999 1998 3 AGDTVGEGDLLVELE Unmodified 1515.7304 0.73043325 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 86.512 86.512 2 5.3222E-05 31445 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.22 85.954 7.4983 0 21.193 9.194 4.6292 10.528 7 0 20 9 5 10 1 0 3 1 1 2 3973.1 774 2782 763 1744;1745 2000;2001;2002 2002 3 AGDTVIPLYIPQCGECK Unmodified 1919.9121 0.91211956 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 6 0 1 74.42 74.42 3 0.00045513 26882 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.33 38.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 775 1474 764 1746 2003 2003 1 AGDVVLVIPFQNPEEQDEGWLMGVK Unmodified 2769.3684 0.36836727 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 10.7 3.3 1 2 98.251 98.251 3;4 7.4894E-06 36837 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.645 36.517 14.836 8.169 52.891 38.738 0 20.254 14 9 51 37 0 19 1 1 2 1 0 1 5134.5 776 1157;2210 765 1747;1748;1749 2004;2005;2006 2004 3 AGEASAESTGAADGAAPEEGEAK Unmodified 2074.8927 0.89270056 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 2.67 3.2 5 4 2 1 42.513 42.513 3;4;5 7.0768E-67 12079 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 163.78 145.24 1619.5 1913.6 2405.1 1765 3140.2 2954.9 1530 1932 2400 1783 3160 2855 12 14 13 11 11 14 1556600 777 2769 766 1750;1751;1752;1753;1754;1755;1756;1757;1758;1759;1760;1761 2007;2008;2009;2010;2011;2012;2013;2014;2015;2016;2017;2018;2019;2020;2021;2022;2023;2024;2025 2010 19 AGEEAADSPELPR Unmodified 1340.6208 0.62082322 2900 Q9CPW2 Fdx1l Adrenodoxin-like protein, mitochondrial yes yes 0 0 0 0 1 0 1 44.379 44.379 2 4.5232E-07 12755 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.22 93.234 20.121 18.373 29.092 0 9.414 0 19 19 28 0 9 0 1 1 1 0 1 0 2925.2 778 2900 767 1762 2026 2026 1 AGEEEPGEPFEIVER Unmodified 1686.7737 0.77369504 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 2 0.816 1 1 1 62.74 62.74 2;3 2.7742E-05 20818 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.802 57.03 79.773 19.438 164.45 110.87 128.56 67.796 75 19 158 111 130 65 3 1 4 3 4 2 29118 779 3449;3451 768 1763;1764;1765 2027;2028;2029;2030 2027 4 AGEIITVLDDSDPNWWK Unmodified 1957.9422 0.94215736 1807 P70297;Q3UGN9 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 5.67 0.471 1 2 93.197 93.197 3;4 8.822E-07 34988 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.69 50.478 5.34 49.125 31.305 39.311 18.986 0 5 47 33 38 19 0 1 3 2 2 1 0 2862.1 780 1807 769 1766;1767;1768 2031;2032;2033 2031 3 AGEMTEVLPNQR Unmodified 1343.6503 0.65034921 2824 Q99J08 Sec14l2 SEC14-like protein 2 yes yes 0 0 0 0 4 0 1 51.696 51.696 3 0.004703 17092 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.693 27.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 781 2824 770 1769 2034 2034 1 AGEPLGVTFR Unmodified 1045.5556 0.55564418 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 0 0 0 13 0 1 55.93 55.93 2 0.030087 19156 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.032 40.485 59.711 74.71 0 0 123.26 65.773 56 74 0 0 120 65 1 1 0 0 1 1 6557.1 782 3241 771 1770 2035 2035 1 AGEQDASIHLK Unmodified 1167.5884 0.58840088 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 7 3.16 1 1 1 1 1 43.91 43.91 3 4.2617E-09 12499 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130.1 92.907 266.8 378.9 380.67 297.3 564.68 155.1 251 379 374 287 558 148 2 4 3 2 4 1 70922 783 71;74;949;1367 772 1771;1772;1773;1774;1775 2036;2037;2038;2039;2040 2038 5 AGFAGDDAPR Unmodified 975.44101 0.44100836 1673;1781;1791 P60710;E9Q1F2;E9Q5F4;G3UZ07;E9Q606;E9Q2D1;F6WX90;P63260;B1ATY1;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 0 7.46 3.18 1 2 2 1 1 1 1 1 1 1 1 39.158 39.158 2;3 1.0983E-28 10734 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 194.22 133.25 3353.8 2905.2 4151.7 3607.4 3113.4 4471.6 3153 2961 4135 3577 3210 4272 10 11 9 12 11 10 3958400 784 1673;1781;1791 773 1776;1777;1778;1779;1780;1781;1782;1783;1784;1785;1786;1787;1788 2041;2042;2043;2044;2045;2046;2047;2048;2049;2050;2051;2052;2053;2054;2055;2056;2057;2058 2045 18 AGFAGDQIPK Unmodified 1002.5134 0.51344502 2672;1691 P61164;Q8R5C5 Actr1a;Actr1b Alpha-centractin;Beta-centractin no no 0 0 0 0 9.4 3.01 1 1 1 2 53.708 53.708 2;3 2.2263E-05 17927 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.3 75.954 246.79 216.04 368.7 453.77 536.5 496.33 232 213 360 436 547 482 3 3 4 4 5 5 52043 785 1691;2672 774 1789;1790;1791;1792;1793 2059;2060;2061;2062;2063;2064 2064 6 AGFLAFTQLPK Unmodified 1191.6652 0.66519463 792 D4AFX7;G3X922 Dnajc13 yes no 0 0 0 0 12 0 1 80.249 80.249 3 0.032164 21900 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 41.283 26.311 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 2929.7 786 792 775 1794 2065 2065 1 AGFSETFLNEMIAPVMK Deamidation (N) 1884.9002 0.90015789 1023 F7CIP8;Q9CQF9;D3Z275 Pcyox1 Prenylcysteine oxidase yes no 0 1 0 0 9 0 1 94.765 94.765 3 0.0011272 33900 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.169 33.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 787 1023 776 1795 2066 2066 269 1 AGGAFDPYTLVR Unmodified 1265.6404 0.64043645 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 67.937 67.937 2;3 7.7098E-13 22268 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.86 56.819 295.42 187.08 324.16 234.61 233.76 309.93 278 194 321 232 242 297 3 2 3 2 2 3 67678 788 1235 777 1796;1797;1798;1799 2067;2068;2069;2070 2069 4 AGGAGVPAFYTSTGYGTLVQEGGSPIK Unmodified 2584.2809 0.28093247 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 7.8 0.748 2 2 1 76.393 76.393 3;4 1.5488E-23 26301 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.352 83.043 148.12 127.26 64.178 64.915 159.92 38.375 139 130 65 65 157 37 3 3 1 2 3 1 52648 789 3028 778 1800;1801;1802;1803;1804 2071;2072;2073;2074;2075 2074 5 AGGALAR Unmodified 614.35001 0.35000851 1976 Q3UH99 Shisa6 Protein shisa-6 homolog yes yes 0 0 0 0 6.5 0.5 1 1 25.373 25.373 2 0.049973 4165 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.553 24.65 580.24 376.92 444.51 426.88 593.16 492.62 545 398 452 425 602 478 2 2 2 2 2 2 43357 790 1976 779 1805;1806 2076;2077 2076 2 AGGANYDAQSE Unmodified 1081.4312 0.43123153 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 0 4.75 4.82 1 1 1 1 36.101 36.101 2 8.5084E-09 10135 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 132.76 119.7 207.52 183.44 149.19 147.76 58.778 237.76 195 186 153 144 61 224 4 4 3 4 3 4 149080 791 2931 780 1807;1808;1809;1810 2078;2079;2080;2081;2082 2080 5 AGGEGGVTLGQPHLSR Acetyl (Protein N-term) 1576.7958 0.79576789 3359 Q9Z0N1;A2AAW9 Eif2s3x Eukaryotic translation initiation factor 2 subunit 3, X-linked yes no 1 0 0 0 3 0 1 48.597 48.597 2 6.7663E-12 16036 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.463 51.5 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 2725.7 792 3359 781 1811 2083 2083 1 AGGFLMK Unmodified 722.37853 0.37853144 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 10.5 0.5 1 1 58.863 58.863 2 0.027447 15563 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.669 54.566 754.4 1208.2 808.35 622.59 714.86 2028.5 710 1196 805 626 741 1922 1 2 1 1 1 2 179790 793 1334 782 1812;1813 2084;2085 2084 2 AGGGAGGSGGSGPSAILR Unmodified 1427.7117 0.71170391 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 5.5 0.5 1 1 44.259 44.259 2 3.1133E-54 12627 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 144.51 121.14 30.006 7.5527 0 0 0 20.254 28 9 0 0 0 19 1 1 0 0 0 1 2063 794 1025 783 1814;1815 2086;2087 2087 2 AGGGRPSSPSPSVVSEK Unmodified 1597.806 0.80599822 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 1 8.67 3.09 1 1 1 38.526 38.526 3 7.3315E-06 10552 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.877 48.762 83.15 81.515 71.229 85.415 56.315 0 78 83 70 83 56 0 2 3 2 3 1 0 12755 795 2301;365 784 1816;1817;1818 2088;2089;2090 2090 3 AGGIETIANEFSDR Unmodified 1478.7001 0.70013617 2137 Q61699;E9Q0U7;D3Z027 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 8.5 4.5 1 1 68.524 68.524 2;3 0.00027784 25152 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.437 65.445 0 0 47.706 46.373 84.446 0 0 0 46 46 84 0 0 0 1 1 2 0 13226 796 2137 785 1819;1820 2091;2092 2092 2 AGGIETIANEYSDR Unmodified 1494.6951 0.69505079 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 7 4.32 1 1 1 58.473 58.473 2;3 1.2617E-11 20710 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 122.52 78.529 118.98 81.998 131.05 105.14 118.18 86.21 112 84 129 102 120 83 3 2 2 2 2 1 16241 797 1957 786 1821;1822;1823 2093;2094;2095 2093 3 AGHFDKEIVPVLVSSR Unmodified 1752.9523 0.95226853 2518 Q8CAY6;G3XA25;Q80X81;F2Z459 Acat2;Acat3 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 1 7 0 1 61.443 61.443 4 0.00087204 19958 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.339 31.018 48.799 44.717 56.047 36.271 44.113 68.031 46 46 56 37 46 65 1 1 1 1 1 1 3477.6 798 2518 787 1824 2096 2096 1 AGHWFATTTPIIGK Unmodified 1498.7932 0.79324869 40 A0A0A0MQ92;A0A0A0MQB7;Q9WTS5 Tenm2 Teneurin-2;Ten-2, soluble form;Ten-2 intracellular domain yes no 0 0 0 0 10 0 1 64.601 64.601 3 0.037655 18045 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.809 22.672 79.006 0 66.617 74.418 132.56 0 74 0 65 74 130 0 1 0 1 1 1 0 4234.7 799 40 788 1825 2097 2097 1 AGIFQSAK Unmodified 820.4443 0.44430282 2893 Q9CPQ1;A0A0G2JDA6 Cox6c Cytochrome c oxidase subunit 6C yes no 0 0 0 0 10.6 1.36 1 2 1 1 52.696 52.696 2;3 0.0025547 12778 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.56 58.65 615.79 318.83 422.89 421.11 348.85 0 577 330 420 412 352 0 2 2 2 2 3 0 113290 800 2893 789 1826;1827;1828;1829;1830 2098;2099;2100;2101;2102 2099 5 AGIISTVEVLK Unmodified 1128.6754 0.67542497 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 9.75 1.92 1 2 1 73.381 73.381 2;3 3.1982E-13 24228 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.35 83.916 493.59 341.32 250.03 388.02 369.51 239.05 463 356 245 375 375 231 4 4 2 4 3 2 43261 801 1899 790 1831;1832;1833;1834 2103;2104;2105;2106 2104 4 AGILFEDIFDVK Acetyl (Protein N-term) 1407.7286 0.72858275 2815 Q923G2;A0A338P6M3 Polr2h DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 1 0 0 0 6 0 1 117.48 117.48 2 1.0396E-07 38755 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.015 69.668 3.2094 1.9116 0 3.279 0 0 3 2 0 3 0 0 1 1 0 1 0 0 560.07 802 2815 791 1835 2107 2107 1 AGILPSHFPLPAAIAK Unmodified 1601.9293 0.92934824 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 10.5 0.5 1 1 73.668 73.668 3 0.00047742 21756 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.32 38.43 98.839 162.47 497.21 0 112.15 327.26 93 158 469 0 111 310 1 2 3 0 1 2 27595 803 3449;3451 792 1836;1837 2108;2109;2110 2110 3 AGIPVFAWK Unmodified 987.55419 0.55418762 1594 P50247;A2ALT5 Ahcy Adenosylhomocysteinase yes no 0 0 0 0 9.25 4.82 1 1 1 1 77.143 77.143 2 1.2078E-05 23171 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.17 98.003 324.28 207.56 96.654 171.6 86.818 88.478 316 204 92 157 83 83 3 4 2 2 1 2 78800 804 1594 793 1838;1839;1840;1841 2111;2112;2113;2114;2115;2116 2112 6 AGITGETEFAEADQDFSDENR Unmodified 2300.9669 0.96692814 356 A0A286YCV0;D3YV00;P98195;A0A286YDR0 Atp9b Phospholipid-transporting ATPase;Probable phospholipid-transporting ATPase IIB yes no 0 0 0 0 2 0 1 65.475 65.475 3 8.7546E-06 23378 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.127 50.417 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 990.82 805 356 794 1842 2117 2117 1 AGKPVICATQMLESMIK Unmodified 1875.962 0.96204664 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 11.7 1.03 1 2 2 2 85.637 85.637 3;4 1.4861E-08 27802 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.23 81.538 395.84 154 382.9 371.13 157.8 254.61 371 158 370 351 157 241 6 3 5 6 2 4 97795 806 1609 795 1843;1844;1845;1846;1847;1848;1849 2118;2119;2120;2121;2122;2123;2124;2125;2126;2127 2118 10 AGLAASIAGSSIINK Unmodified 1371.7722 0.7721789 379 A0A2I3BQ43;A0JP53;D3YXJ0 Dgkh Diacylglycerol kinase yes no 0 0 0 0 10 0 1 69.508 69.508 3 8.9224E-05 20323 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.231 60.425 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 3640.8 807 379 796 1850 2128 2128 1 AGLAEAPLVTGQPGPGHGK Unmodified 1755.9268 0.92678206 1044 F8WHW6;O70161;E0CYP4 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 7 0 2 52.896 52.896 3;4 9.5966E-08 15880 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.176 69.789 69.451 0 68.691 28.93 27.959 69.29 65 0 65 28 28 65 1 0 2 1 1 1 5137.8 808 1044 797 1851;1852 2129;2130 2130 2 AGLAPVPMIIFAK Unmodified 1326.7734 0.77336487 1819 P70697;A0A0A0MQG7 Urod Uroporphyrinogen decarboxylase yes no 0 0 0 0 12 0 2 88.337 88.337 2;3 5.3572E-05 25088 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.113 69.995 19 29.792 0 0 46.807 38.106 19 28 0 0 46 37 1 1 0 0 1 1 3567.2 809 1819 798 1853;1854 2131;2132 2131 2 AGLAVAR Unmodified 656.39696 0.3969587 3434 yes no 0 0 0 0 9 0 1 40.855 40.855 2 0.027421 9174 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.396 0 0 758.95 872 0 848.97 1016.2 0 727 848 0 845 976 0 1 1 0 1 1 84995 + 810 3434 799 1855 2133 2133 1 AGLDVKPFITNPR Unmodified 1426.7932 0.79324869 2660 Q8R3P0;B0QZP3;V9GXG0;D6RJ20 Aspa Aspartoacylase yes no 0 0 0 1 9 0 1 60.908 60.908 3 0.00033873 18277 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.24 45.012 0 69.16 0 0 116.11 0 0 65 0 0 111 0 0 1 0 0 1 0 10628 811 2660 800 1856 2134 2134 1 AGLELSPEMK Unmodified 1073.5427 0.54269624 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 9.5 3.5 1 1 61.163 61.163 2 0.00016541 20604 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.688 42.958 39.072 45.182 67.422 0 67.99 0 37 46 65 0 65 0 1 1 1 0 1 0 3315.8 812 1359 801 1857;1858 2135;2136 2135 2 AGLEQGSDAGYLAESQK Unmodified 1722.8061 0.8060578 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 4.5 0.5 1 1 55.957 55.957 3 9.8021E-39 19154 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.99 109.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 813 2435 802 1859;1860 2137;2138 2137 2 AGLGHPSAFGR Acetyl (Protein N-term) 1110.557 0.55704117 2980 Q9CWS0 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 1 0 0 0 4.5 0.5 1 1 43.961 43.961 2 5.4726E-43 13106 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.16 68.058 20.244 28.427 0 49.77 27.002 28 19 28 0 46 28 28 1 1 0 1 1 1 35974 814 2980 803 1861;1862 2139;2140 2140 2 AGLILFGNDDR Unmodified 1189.6091 0.60913632 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 70.434 70.434 2 4.3395E-05 23514 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.48 59.448 69.42 64.479 0 0 77.404 0 65 65 0 0 74 0 1 1 0 0 1 0 11392 815 2633 804 1863;1864 2141;2142 2141 2 AGLNSLEAVK Acetyl (Protein N-term) 1042.5659 0.56587452 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 1 0 0 0 4.5 0.5 1 1 69.623 69.623 2 0.0012899 25245 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.066 31.22 29.904 27.776 0 49.447 44.204 47.775 28 28 0 46 46 46 1 1 0 1 1 1 6341.7 816 2196 805 1865;1866 2143;2144 2144 2 AGLPLPAALAFVPR Unmodified 1391.8289 0.82890592 1961 Q3U487 Hectd3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 0 6.5 5.5 1 1 87.588 87.588 2;3 0.00041738 24635 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.643 40.709 0 0 23.984 20.24 9.0934 9.3345 0 0 23 19 9 9 0 0 2 1 1 1 4571.7 817 1961 806 1867;1868 2145;2146 2146 2 AGLPPYSPVFK Unmodified 1174.6386 0.63864553 2277 Q791T5 Mtch1 Mitochondrial carrier homolog 1 yes yes 0 0 0 0 10 0 1 68.752 68.752 3 0.039394 19822 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.917 14.531 49.009 0 58.73 36.244 37.037 0 46 0 56 37 37 0 1 0 1 1 1 0 2333.3 818 2277 807 1869 2147 2147 1 AGLQFPVGR Unmodified 943.52395 0.52395013 1468;645;1338 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4;Q6GSS7;A0A0N4SV66;Q8CGP4;Q8R1M2;Q64523;G3UWL7;Q3THW5;P0C0S6;Q3UA95;P27661;Q64522 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a;Hist2h2aa1;Hist1h2aa;H2afj;Hist2h2ac;H2afz;H2afv;H2afx;Hist2h2ab Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3;Histone H2A type 2-A;Histone H2A;Histone H2A.J;Histone H2A type 2-C;Histone H2A.V;Histone H2A.Z;Histone H2AX;Histone H2A type 2-B no no 0 0 0 0 10.2 1.72 1 1 1 1 1 57.07 57.07 2 9.2154E-18 19525 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 181.81 116 1301.5 1555.8 2854.9 2447 3065.7 2608.9 1225 1566 2813 2434 3107 2513 6 6 8 8 8 7 877010 819 645;1338;1468 808 1870;1871;1872;1873;1874 2148;2149;2150;2151;2152;2153;2154;2155;2156;2157 2156 10 AGLQTADK Unmodified 802.41848 0.418482 9 A0A087WNV1;A0A087WSR7;A0A087WR52;Q8K2K6 Agfg1 Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 0 6.5 0.5 1 1 40.014 40.014 2 0.017312 10543 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.219 21.614 108.64 70.14 76.024 54.932 92.759 58.114 102 74 74 56 93 56 2 2 1 2 2 1 6287.6 820 9 809 1875;1876 2158;2159 2158 2 AGLTVDPVIVEAFLASLSNR Unmodified 2071.1314 0.13135511 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 9.5 0.5 1 1 109.65 109.65 3 3.3439E-17 37506 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.74 110.48 6.438 0 6 4.372 0 10.66 6 0 6 4 0 10 1 0 1 1 0 1 3741.8 821 240 810 1877;1878 2160;2161 2160 2 AGLVDFQDEEQVK Acetyl (Protein N-term) 1518.7202 0.72020291 2796 Q921H9 Coa7 Cytochrome c oxidase assembly factor 7 yes yes 1 0 0 0 2.5 0.5 1 1 77.084 77.084 2;3 1.1295E-06 29180 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.81 76.023 30.044 0 0 30.604 0 49.036 28 0 0 28 0 46 2 0 0 1 0 1 4494.6 822 2796 811 1879;1880 2162;2163 2163 2 AGLVGPELHEK Unmodified 1148.619 0.61897272 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 6 0 1 48.896 48.896 3 0.00011532 14822 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.258 55.02 69.341 0 67.974 45.043 62.944 86.682 65 0 65 46 65 83 1 0 1 1 1 1 4433.2 823 3266 812 1881 2164 2164 1 AGLVIGK Unmodified 656.42211 0.42211082 1952;99 Q3U0V1;A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8;A0A0G2JFK2 Khsrp;Fubp1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 0 0 13 0 1 54.071 54.071 2 0.044734 18315 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.944 43.239 167.72 197.06 137.73 0 0 0 158 198 139 0 0 0 1 1 1 0 0 0 8757.2 824 1952;99 813 1882 2165 2165 1 AGLYGLPK Unmodified 817.46979 0.46978929 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9.5 0.5 1 1 59.144 59.144 2 0.0051681 15621 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.54 71.473 0 116.77 79.507 222.44 299.3 337.91 0 111 83 213 307 325 0 1 1 2 2 2 26209 825 1412 814 1883;1884 2166;2167 2167 2 AGNAPKDEIDSAVK Unmodified 1413.71 0.70997257 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 1 5 0 1 50.062 50.062 3 0.0018445 16019 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.092 40.372 59.538 44.009 55.071 57.926 0 78.884 56 46 56 56 0 74 1 1 1 1 0 1 3387.1 826 1506 815 1885 2168 2168 1 AGNLGGGVVTIER Unmodified 1241.6728 0.67279921 1790 P67984 Rpl22 60S ribosomal protein L22 yes yes 0 0 0 0 6.5 0.5 1 1 53.32 53.32 2 0.0025179 16071 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.953 34.822 59.711 74.71 0 60.006 63.896 38.94 56 74 0 56 65 37 2 2 0 2 2 1 8142.1 827 1790 816 1886;1887 2169;2170 2170 2 AGNSLVLPIVLWGR Acetyl (Protein N-term);Deamidation (N) 1536.8664 0.86641364 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 1 1 0 0 10.5 2.5 1 1 110.13 110.13 2 1.5236E-06 44314 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.283 44.503 0 0 0 6.1315 2.8965 4.1813 0 0 0 6 3 4 0 0 0 2 1 1 1124.1 828 2790 817 1888;1889 2171;2172 2172 995 2 AGNSLVLPIVLWGR Acetyl (Protein N-term) 1535.8824 0.88239805 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 1 0 0 0 9.5 0.5 1 1 105.97 105.97 2 0.00025965 33738 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.228 29.902 0 0 14.749 14.25 9.1709 0 0 0 14 14 9 0 0 0 1 2 1 0 12689 829 2790 817 1890;1891 2173;2174 2174 2 AGPAWMVTR Unmodified 987.49602 0.49602082 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 11 2 1 1 54.62 54.62 2 0.0022108 15509 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.027 43.16 376.53 116.72 97.648 291.76 333.83 153.35 352 120 102 278 337 148 2 1 1 2 2 1 49398 830 2295 818 1892;1893 2175;2176 2175 2 AGPLAGGVTTFVALYDYESR Unmodified 2086.0371 0.037120373 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 7 0 1 90.337 90.337 3 0.0047584 33435 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.969 20.48 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 831 1048 819 1894 2177 2177 1 AGPLGGSSYEEEEEEEGGGGGER Unmodified 2280.9255 0.92545725 3230 Q9JKF6 Pvrl1 Nectin-1 yes yes 0 0 0 0 1.5 0.5 1 1 48.868 48.868 3 2.6609E-22 14661 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.27 114.46 7.479 0 5.3723 0 0 9.594 7 0 5 0 0 9 1 0 1 0 0 1 3344.6 832 3230 820 1895;1896 2178;2179 2178 2 AGPNIYELR Unmodified 1031.54 0.53999412 1237 O55125 Nipsnap1 Protein NipSnap homolog 1 yes yes 0 0 0 0 9.5 3.5 1 1 53.177 53.177 2 0.0013441 17044 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.19 56.38 372.41 108.36 436.39 411.36 455.74 433.65 350 111 428 408 468 419 2 1 2 2 2 2 64666 833 1237 821 1897;1898 2180;2181 2180 2 AGPQQQPPYLHLAELTASQFLEIWK Acetyl (Protein N-term) 2906.4967 0.49667933 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 1 0 0 0 13 0 1 114.57 114.57 3 3.4793E-05 44828 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.902 34.648 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1706.2 834 1892 822 1899 2182 2182 1 AGPTSLPLGK Unmodified 939.53893 0.53893149 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 9 0 2 56.121 56.121 2;3 0.0028785 16016 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.998 36.931 0 108.53 0 111.49 0 191.73 0 102 0 102 0 185 0 1 0 1 0 2 21105 835 1019 823 1900;1901 2183;2184 2184 2 AGPVQVLIVK Unmodified 1022.6488 0.64881629 2398 Q8BH66;A0A1Y7VLD6 Atl1 Atlastin-1 yes no 0 0 0 0 9.5 0.5 1 1 67.228 67.228 2;3 0.0011449 19226 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.376 50.819 48.883 98.952 79.822 111.49 56.581 146.56 46 93 74 102 56 139 1 1 1 1 1 2 9520 836 2398 824 1902;1903 2185;2186 2186 2 AGQANPSVK Unmodified 870.45593 0.45593014 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 6 0 1 34.748 34.748 2 0.001896 8186 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.431 51.005 0 38.425 56.429 17.404 0 0 0 37 55 19 0 0 0 1 1 1 0 0 1737.4 837 967 825 1904 2187 2187 1 AGQAVDDFIEK Unmodified 1191.5772 0.57716749 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 4.5 0.5 1 1 63.569 63.569 3 0.00064548 22406 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.29 48.44 59.803 25.319 26.369 47.296 103 37.302 56 28 28 46 103 37 1 1 1 1 2 1 8816.8 838 3142 826 1905;1906 2188;2189 2189 2 AGQENISVSK Unmodified 1031.5247 0.52473799 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 7.75 3.11 1 1 1 1 43.559 43.559 2 2.2105E-08 12939 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.46 92.671 296.42 226.47 304.81 308.93 391.26 316.07 278 232 306 306 398 306 3 3 3 4 4 3 56765 839 2253 827 1907;1908;1909;1910 2190;2191;2192;2193 2193 4 AGQEQSASDPR Unmodified 1144.5109 0.51087884 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 5.33 5.44 1 1 1 23.462 23.462 2 4.7182E-08 3947 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.74 91.193 0 29.792 33.364 28.279 47.185 19.743 0 28 32 28 47 19 0 2 1 1 3 1 9902.3 840 570 828 1911;1912;1913 2194;2195;2196 2194 3 AGQTQPNPGILPIQPALTPR Unmodified 2068.1429 0.14292285 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 11 2 1 1 69.221 69.221 3 8.7483E-07 25580 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 47.148 109.45 69.16 0 119.96 72.275 166.37 102 65 0 111 74 158 1 1 0 2 1 2 15501 841 1983 829 1914;1915 2197;2198 2198 2 AGQTTYSGVVDCFR Unmodified 1559.7038 0.70384134 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 6 0 1 57.348 57.348 2 6.5785E-11 18822 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.46 97.242 0 0 18.367 49.183 0 0 0 0 19 46 0 0 0 0 1 1 0 0 4280.2 842 2396 830 1916 2199 2199 1 AGQVAYLEK Unmodified 977.5182 0.51819605 728 D3YZ62;D3Z4J3;Q99104;E9Q1F5;G5E8G6;G3X9Y9;P21271 Myo5a;Myo5c;Myo5b Unconventional myosin-Va;Unconventional myosin-Vb yes no 0 0 0 0 10 3 1 1 52.727 52.727 2 0.0041313 15974 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.806 39.938 109.01 85.664 0 99.822 163.12 203.22 102 83 0 93 167 195 2 1 0 1 2 2 10139 843 728 831 1917;1918 2200;2201 2200 2 AGQVEVVR Unmodified 856.47667 0.47666558 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 37.336 37.336 2 0.026664 10278 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.301 13.823 119.1 0 0 101.65 0 0 111 0 0 93 0 0 1 0 0 1 0 0 11740 844 3449;3451;3452 832 1919 2202 2202 1 AGQVFLEELGNHK Deamidation (N) 1441.7201 0.72014333 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 1 0 0 5.33 0.471 2 1 66.22 66.22 3 7.6001E-05 23323 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.32 73.911 168.31 78.352 139.05 130.14 194.72 95.218 158 84 139 130 195 92 3 2 3 3 3 2 18021 845 1390 833 1920;1921;1922 2203;2204;2205 2203 459 3 AGQVFLEELGNHK Unmodified 1440.7361 0.73612775 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 9.33 2.75 1 1 1 1 2 64.791 64.791 3 4.043E-19 22377 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 147.73 104.42 386.53 172.49 332.43 225.69 479.22 434.63 362 167 324 222 473 418 4 2 4 3 4 4 124890 846 1390 833 1923;1924;1925;1926;1927;1928 2206;2207;2208;2209;2210;2211;2212;2213 2207 8 AGQVVQIPVAEIVVGDIAQIK Unmodified 2146.2362 0.23615453 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 8.86 2.7 1 2 2 2 98.28 98.28 3;4 5.5043E-11 36028 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.156 77.407 172.39 65.047 118.65 194.24 142.06 140.03 161 65 115 183 144 133 5 2 5 8 5 6 19044 847 1042 834 1929;1930;1931;1932;1933;1934;1935 2214;2215;2216;2217;2218;2219;2220;2221;2222;2223 2215 10 AGRPEPEPESEQPAGR Unmodified 1705.802 0.80197548 921 E9Q6Y8 Usp31 Ubiquitin carboxyl-terminal hydrolase yes yes 0 0 0 1 1 0 1 29.278 29.278 3 1.2357E-05 6430 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.69 55.209 0 0 18.806 39.32 0 0 0 0 19 37 0 0 0 0 1 1 0 0 3113.2 848 921 835 1936 2224 2224 1 AGSAETESAAK Unmodified 1020.4724 0.47236807 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 5.8 3.66 1 2 1 1 32.971 32.971 2;3 1.754E-08 8193 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.94 85.628 294.39 297.88 223.56 358.18 1298.2 252.59 277 299 232 355 1276 260 4 3 2 3 5 3 135360 849 1318 836 1937;1938;1939;1940;1941 2225;2226;2227;2228;2229 2226 5 AGSALNR Unmodified 687.36639 0.36638685 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6 0.816 1 1 1 27.441 27.441 2 0.011182 5289 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.52 49.38 626.9 501.84 611.97 477.43 570.6 686.21 590 521 616 480 589 659 3 3 3 3 3 3 136920 850 2843 837 1942;1943;1944 2230;2231;2232 2230 3 AGSELLESSAGDDASSLR Unmodified 1763.8174 0.81735077 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 2.5 0.5 1 1 57.43 57.43 3 0.0061493 20025 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.759 19.806 0 38.738 37.71 0 0 39.442 0 37 37 0 0 37 0 1 1 0 0 1 4730.7 851 581 838 1945;1946 2233;2234 2234 2 AGSISTLDSLDFAR Unmodified 1451.7256 0.72562264 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7;A0A087WRM8 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 6 0 1 70.919 70.919 2 0.055715 25221 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.083 6.1397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 852 35 839 1947 2235 2235 1 AGSIVLK Unmodified 686.43268 0.4326755 2901 Q9CPW4 Arpc5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 0 10.7 1.7 1 1 1 52.408 52.408 2 0.021458 14295 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.39 50.865 127.51 600.16 372.66 436.2 635.62 309.91 120 578 370 421 637 299 1 3 2 2 3 1 72874 853 2901 840 1948;1949;1950 2236;2237;2238 2236 3 AGSLPPCVVDCGTGYTK Acetyl (Protein N-term) 1822.823 0.8229702 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 1 0 0 0 5 0 1 69.932 69.932 3 0.0058739 25341 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.52 26.614 29.904 27.776 0 39.766 35.885 28.824 28 28 0 37 37 28 1 1 0 1 1 1 4437.2 854 2170 841 1951 2239 2239 1 AGSTALGSK Unmodified 790.41848 0.418482 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 9.67 2.49 1 1 1 39.177 39.177 2 0.004573 8554 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.465 41.365 157 109.64 210.41 66.232 74.362 148.17 148 111 204 65 74 139 2 1 2 1 1 1 23363 855 510 842 1952;1953;1954 2240;2241;2242 2241 3 AGSVADSDAVVK Acetyl (Protein N-term) 1159.5721 0.57208211 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 1 0 0 0 6 4.97 1 1 1 54.656 54.656 2 1.4573E-32 18397 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.653 78.994 176.96 206.16 297.24 308.66 371.44 345.44 166 204 296 305 380 334 2 2 2 3 3 3 73937 856 2709 843 1955;1956;1957 2243;2244;2245 2243 3 AGTFQAFEQFGQQLLAHGHYASPEIK Unmodified 2874.4089 0.40892695 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9 0.816 1 1 1 84.206 84.206 4;5 3.8021E-20 30037 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.664 67.344 148.59 64.479 39.635 0 0 174.99 139 65 37 0 0 167 3 2 1 0 0 3 52643 857 551 844 1958;1959;1960 2246;2247;2248;2249 2246 4 AGTGVDNVDLEAATR Unmodified 1487.7216 0.72159989 2138 Q61753;F6ZSB7 Phgdh D-3-phosphoglycerate dehydrogenase yes no 0 0 0 0 5.8 3.66 1 2 1 1 52.387 52.387 2;3 3.8155E-59 17816 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 206.7 168.98 116.09 96.851 113.75 79.169 48.116 62.894 109 93 111 77 46 59 3 2 3 2 1 2 43219 858 2138 845 1961;1962;1963;1964;1965 2250;2251;2252;2253;2254 2250 5 AGTITSTPNR Unmodified 1016.5251 0.52507234 2015 Q3UYC0 Ppm1h Protein phosphatase 1H yes yes 0 0 0 0 6 0 1 33.431 33.431 2 0.00023118 7545 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.635 61.45 39.368 36.291 25.282 59.22 25.568 29.118 37 37 28 56 28 28 1 1 1 1 1 1 2519.9 859 2015 846 1966 2255 2255 1 AGTQIENIEEDFR Unmodified 1520.7107 0.71070086 418;3209 A1BN54;Q7TPR4;O88990;Q9JI91 Actn1;Actn3;Actn2 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-2 no no 0 0 0 0 2.5 0.5 1 1 66.257 66.257 2;3 1.4527E-10 24017 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.93 62.471 20.265 0 29.456 0 0 29.848 19 0 28 0 0 28 1 0 2 0 0 1 6830.2 860 418;3209 847 1967;1968 2256;2257 2257 2 AGTSPGTPNR Unmodified 956.46756 0.46755746 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 7.33 4.03 1 1 1 25.026 25.026 2 0.0023863 4312 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.136 49.375 0 19.834 22.847 28.885 18.999 9.594 0 19 23 28 19 9 0 1 1 2 1 1 3462.8 861 175 848 1969;1970;1971 2258;2259;2260 2259 3 AGTTTIEAVK Acetyl (Protein N-term) 1031.5499 0.5498901 782;926;757 D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3-rs7;Tpm3 no no 1 0 0 0 6.25 3.96 1 1 1 1 56.923 56.923 2 6.5405E-09 19729 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.223 22.719 355.03 402.28 613.05 518.31 497.71 459.91 335 408 610 519 511 441 3 3 4 4 3 3 161640 862 757;782;926 849 1972;1973;1974;1975 2261;2262;2263;2264;2265 2263 5 AGTTTIEAVKR Acetyl (Protein N-term) 1187.651 0.65100113 782;926;757 D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3-rs7;Tpm3 no no 1 0 0 1 7.33 4.03 1 1 1 47.725 47.725 2 1.8693E-10 14936 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.205 48.56 0 0 175.57 164.29 92.398 214.83 0 0 167 157 93 204 0 0 2 2 2 3 38695 863 757;782;926 850 1976;1977;1978 2266;2267;2268 2267 3 AGVATPGLTEDQLWR Unmodified 1612.8209 0.82092001 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 5 0 1 67.596 67.596 2 5.6055E-11 24208 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.18 84.622 0 29.792 0 40.102 18.032 0 0 28 0 37 19 0 0 1 0 1 1 0 5788.2 864 2730 851 1979 2269 2269 1 AGVDGWFK Unmodified 878.42865 0.42865276 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 10.5 2.5 1 1 65.932 65.932 2 0.01793 23778 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.774 40.894 147.5 144.94 154.72 152.54 0 127.92 139 148 158 148 0 120 1 1 1 1 0 1 25508 865 1796 852 1980;1981 2270;2271 2271 2 AGVDQHEGTIK Acetyl (Protein N-term) 1195.5833 0.5833155 968 E9QN99;A0A087WP24;A0A087WRJ2;A0A087WPF8;A0A087WSR2 Abhd14b yes no 1 0 0 0 2.5 0.5 1 1 39.734 39.734 2 0.002289 11809 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 49.418 17.276 0 68.697 27.685 19.117 37.384 38.375 0 65 28 19 37 37 0 2 1 1 1 1 8406.1 866 968 853 1982;1983 2272;2273 2272 2 AGVIGLTQTAAR Unmodified 1156.6564 0.65642086 1593 P50171;G3UX44 Hsd17b8;H2-Ke6 Estradiol 17-beta-dehydrogenase 8 yes no 0 0 0 0 9 0 1 52.771 52.771 2 1.6657E-11 14400 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.34 78.108 0 48.944 0 30.604 0 0 0 46 0 28 0 0 0 1 0 1 0 0 6543.2 867 1593 854 1984 2274 2274 1 AGVISAPQSQAR Unmodified 1183.6309 0.63093439 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8;F7CD11 Synj1 Synaptojanin-1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 39.741 39.741 2;3 1.4153E-14 9082 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.23 86.802 207.05 98.836 103.84 71.045 69.167 87.57 194 102 102 65 69 84 4 2 2 1 2 2 22297 868 927 855 1985;1986;1987;1988 2275;2276;2277;2278 2277 4 AGVLAGHDNR Unmodified 1008.5101 0.51009098 1751;1750 P62880;E9QKR0;D3YZX3;E9PWM7;P62874 Gnb2;Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 0 8.33 2.75 1 2 2 1 1 1 1 30.381 30.381 2;3 5.9002E-10 6629 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 157.66 123.87 357.97 305.55 306.68 249.51 309.28 343.2 336 307 306 244 310 329 7 7 6 5 4 6 383430 869 1751;1750 856 1989;1990;1991;1992;1993;1994;1995;1996;1997 2279;2280;2281;2282;2283;2284;2285;2286;2287 2279 9 AGVLAHLEEER Unmodified 1222.6306 0.63060004 1974;2696 Q8VDD5;Q3UH59;Q61879;Q5SV64 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 9.5 3.5 1 1 50.235 50.235 3 0.00053534 16115 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.65 28.663 78.204 120.75 99.038 82.759 109.37 85.357 74 120 102 83 111 83 1 1 1 1 1 1 7361.7 870 2696;1974 857 1998;1999 2288;2289 2288 2 AGVLSQADYLNLVQCETLEDLK Unmodified 2478.2312 0.23120509 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 7.86 3.31 2 2 1 2 90.336 90.336 3;4 8.5095E-19 35776 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.99 89.945 192.65 219.36 136.86 114.69 93.068 131.39 181 219 134 111 93 125 6 7 4 4 4 4 61775 871 1606 858 2000;2001;2002;2003;2004;2005;2006 2290;2291;2292;2293;2294;2295;2296;2297 2297 8 AGVNFSEFTGVWK Unmodified 1440.7038 0.70376498 1361 P12815 Pdcd6 Programmed cell death protein 6 yes yes 0 0 0 0 10 2.16 1 1 1 80.435 80.435 2;3 1.3599E-05 27572 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.85 67.831 159.52 0 59.267 87.593 123.32 98.096 149 0 56 84 120 93 3 0 1 2 2 2 22514 872 1361 859 2007;2008;2009 2298;2299;2300 2299 3 AGVPTSYLLIPAASYVLPEVSK Unmodified 2274.2511 0.25113589 120 A0A0J9YUY0;D3Z780;Q61749 Eif2b4 Translation initiation factor eIF-2B subunit delta yes no 0 0 0 0 9 0 1 95.231 95.231 3 0.00011732 34086 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.833 29.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 873 120 860 2010 2301 2301 1 AGVSFSGHR Acetyl (Protein N-term) 958.46208 0.46207815 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 1 0 0 0 3 0 1 35.807 35.807 2 4.8258E-12 10094 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.62 102.89 0 29.315 28.537 0 0 0 0 28 28 0 0 0 0 1 1 0 0 0 22407 874 3267 861 2011 2302 2302 1 AGVVGPELHEK Unmodified 1134.6033 0.60332266 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 45.027 45.027 3 0.013588 13537 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.004 15.783 39.424 0 46.576 67.275 52.828 77.377 37 0 46 65 56 74 1 0 1 1 1 1 2815.9 875 3266 862 2012 2303 2303 1 AGVWLIDFGK Unmodified 1104.5968 0.59678072 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 11 1.41 1 1 1 1 1 84.621 84.621 2;3 3.701E-05 26484 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.033 65.51 30.044 66.792 0 0 38.044 160.61 28 65 0 0 37 158 1 2 0 0 1 3 20859 876 2629 863 2013;2014;2015;2016;2017 2304;2305;2306;2307;2308 2306 5 AGVYPER Unmodified 790.39735 0.39735263 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 4.5 0.5 1 1 35.208 35.208 2 0.011479 8844 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.89 60.906 773.04 575.77 873.24 568.7 536.77 904.64 728 594 866 569 562 863 2 1 2 1 1 2 128850 877 118;1534 864 2018;2019 2309;2310 2310 2 AGWNAYIDSLMADGTCQDAAIVGYK Acetyl (Protein N-term) 2731.2258 0.22580213 1758 P62962;Q5SX49;J3QMC2 Pfn1 Profilin-1;Profilin yes no 1 0 0 0 6 0 1 105.71 105.71 3 2.5616E-12 37832 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.746 34.753 8.5215 6.0243 5.3939 0 10.821 19.945 8 6 5 0 11 19 2 1 1 0 2 2 4706 878 1758 866 2020 2311;2312 2311 2 AGYTDQVVIGMDVAASEFYR Unmodified 2191.0256 0.025569409 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 87.205 87.205 3 7.1581E-12 33381 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.96 76.322 39.468 62.499 48.321 43.769 56.822 47.957 37 62 47 43 57 46 2 4 2 3 3 4 31455 879 1398 867 2021;2022;2023;2024;2025 2313;2314;2315;2316;2317 2313 5 AGYVGLVTVPVATLAGR Unmodified 1642.9406 0.94064121 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 11 0.816 1 1 1 80.202 80.202 2;3 9.0096E-08 24699 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.15 85.294 85.904 57.568 0 40.441 19.197 19.706 84 56 0 37 19 19 2 2 0 1 1 1 45058 880 992 868 2026;2027;2028 2318;2319;2320;2321 2320 4 AHAFVVQQR Unmodified 1054.5672 0.56721192 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 33.562 33.562 3 0.00019585 6411 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.9 86.367 0 29.792 0 49.624 34.772 48.044 0 28 0 46 37 46 0 1 0 1 1 1 5714.3 881 3266 869 2029 2322 2322 1 AHATGAGPAGR Unmodified 964.48388 0.48387622 1450 P26039;F6SX70;F6S1V7 Tln1 Talin-1 yes no 0 0 0 0 6 0 1 18.832 18.832 3 0.0012621 2677 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.694 21.407 2.1149 0 5.2226 3.9678 4.9428 3.057 2 0 5 4 5 3 1 0 1 1 1 1 339.45 882 1450 870 2030 2323 2323 1 AHAVAQVDAWQQLQTFFHK Unmodified 2224.1178 0.11777073 3282 Q9QYR9 Acot2 Acyl-coenzyme A thioesterase 2, mitochondrial yes yes 0 0 0 0 11 0 1 76.051 76.051 4 0.0070743 22669 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.824 14.536 69.451 0 49.422 0 0 0 65 0 46 0 0 0 1 0 1 0 0 0 3076.2 883 3282 871 2031 2324 2324 1 AHCIQQMTSK Unmodified 1202.5536 0.55361205 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7 Sept5 Septin-5 no no 0 0 0 0 11 2 1 1 39.238 39.238 3 0.00062108 8686 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.749 59.43 188.21 0 106.5 74.535 0 187.62 176 0 102 74 0 176 2 0 1 1 0 2 22566 884 410;3398 872 2032;2033 2325;2326 2325 2 AHEAQDAGYR Unmodified 1116.4948 0.49483484 1786;811;374 A0A2I3BPC5;P48455;E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cc;Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 4 3.54 1 2 2 2 1 23.272 23.272 2;3 9.2929E-22 4248 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 187.82 159.93 330.62 198.68 186.85 359.86 158.9 231.06 310 206 186 342 162 220 8 6 5 9 4 3 277950 885 374;811;1786 873 2034;2035;2036;2037;2038;2039;2040;2041 2327;2328;2329;2330;2331;2332;2333;2334;2335;2336 2328 10 AHEEANAAR Unmodified 967.44716 0.44715637 2811 Q922U1 Prpf3 U4/U6 small nuclear ribonucleoprotein Prp3 yes yes 0 0 0 0 1.5 0.5 1 1 16.457 16.457 3 0.00015819 2691 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.49 95.287 2.1287 3.192 2.9044 10.706 2.6896 6.3193 2 3 3 10 3 6 1 1 1 2 1 2 953.16 886 2811 874 2042;2043 2337;2338 2337 2 AHEILPELVCCSAK Unmodified 1625.7905 0.79054786 1543 P42932;H3BLL1;H3BKG2 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8 0 1 60.618 60.618 3 0.0021871 18841 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.939 37.148 0 0 49.772 0 0 69.29 0 0 46 0 0 65 0 0 1 0 0 1 2344.6 887 1543 875 2044 2339 2339 1 AHGFTFTR Unmodified 935.46135 0.46134987 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 39.612 39.612 3 0.00039074 8637 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.28 87.06 236.04 98.063 486.13 174.27 203.94 487.74 222 102 463 176 204 463 3 2 4 2 2 4 132610 888 1520 876 2045;2046;2047;2048 2340;2341;2342;2343 2341 4 AHGGHPGSPR Unmodified 971.46856 0.46856051 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 4.5 0.5 1 1 16.455 16.455 3 1.1817E-05 2426 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.43 68.165 9.5959 0 10.267 11.337 3.9475 7.462 9 0 10 11 4 7 2 0 2 2 1 1 1247.9 889 817 877 2049;2050 2344;2345 2345 2 AHGGYSVFAGVGER Unmodified 1405.6739 0.67386184 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 8.4 3.29 1 1 2 1 1 1 1 1 1 47.043 47.043 2;3 2.9201E-17 9127 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.79 113.53 612.59 484.16 568.74 482.24 460.4 412.86 575 497 559 465 457 395 8 8 9 6 6 6 275630 890 1642 878 2051;2052;2053;2054;2055;2056;2057;2058;2059;2060 2346;2347;2348;2349;2350;2351;2352;2353;2354;2355;2356 2355 11 AHGNSGMVR Unmodified 927.43448 0.43448319 1241 O55142 Rpl35a 60S ribosomal protein L35a yes yes 0 0 0 0 6 0 1 19.969 19.969 3 0.027035 2804 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.462 27.79 9.612 8.9279 0 9.6743 8.6486 9.3472 9 9 0 9 9 9 1 1 0 1 1 1 563.72 891 1241 879 2061 2357 2357 1 AHGSVVK Unmodified 696.39187 0.39187332 1418 P19783 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 0 8.5 1.71 1 1 1 1 1 1 27.727 27.727 3 0.0034083 4548 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.63 67.567 524.56 347.01 508.85 438.62 381.24 374.78 492 367 505 430 395 361 2 4 4 3 4 3 49047 892 1418 880 2062;2063;2064;2065;2066;2067 2358;2359;2360;2361;2362;2363 2359 6 AHIAQLCEK Unmodified 1068.5386 0.53861391 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.29 2.66 1 2 1 1 2 41.676 41.676 2;3;4 0.00035001 11899 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.033 68.56 549.26 433.64 462.12 333.71 513.94 514.24 515 435 463 320 504 492 6 6 6 5 5 5 223210 893 2185 881 2068;2069;2070;2071;2072;2073;2074 2364;2365;2366;2367;2368;2369;2370;2371 2370 8 AHIFVYGTLK Acetyl (Protein N-term) 1189.6495 0.64954457 797 H3BKQ5;E0CZ04;E0CX39;Q923B0 Ggact Gamma-glutamylaminecyclotransferase yes no 1 0 0 0 9 0 1 68.53 68.53 2 4.8631E-05 21961 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.305 34.016 0 0 0 49.085 63.418 67.48 0 0 0 46 65 65 0 0 0 1 1 1 3893.9 894 797 882 2075 2372 2372 1 AHIISDQK Unmodified 910.48723 0.48723027 419 A2A432;E9PXY1;J3QJX0 Cul4b Cullin-4B yes no 0 0 0 0 7 0 1 37.344 37.344 3 0.017564 8751 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.011 31.856 39.564 27.124 0 30.604 0 39.442 37 28 0 28 0 37 1 1 0 1 0 1 4648.8 895 419 883 2076 2373 2373 1 AHILSAEFGK Unmodified 1071.5713 0.57129425 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0 1 54.042 54.042 3 0.03309 15006 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.21 23.899 0 0 60.592 0 0 78.884 0 0 56 0 0 74 0 0 1 0 0 1 3935.8 896 893 884 2077 2374 2374 1 AHLGTALK Unmodified 809.47594 0.4759373 1717 P62267 Rps23 40S ribosomal protein S23 yes yes 0 0 0 0 9 0 1 40.484 40.484 3 0.0055794 9022 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.248 21.461 107.73 147.48 163.32 203.4 0 189.75 102 148 168 195 0 178 1 1 1 1 0 1 10270 897 1717 885 2078 2375 2375 1 AHLILFK Unmodified 840.52216 0.52215921 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 8 4.97 1 1 1 59.285 59.285 3 0.0053045 19659 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.285 81.945 137.53 112.13 234.94 273.46 290.16 200.63 130 111 232 268 296 194 3 2 3 4 4 2 38361 898 556 886 2079;2080;2081 2376;2377;2378;2379 2376 4 AHLLNIPSWNWK Unmodified 1477.783 0.78301836 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A087WQE1 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 12 0 2 73.575 73.575 3;4 0.00017633 19118 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.659 65.629 99.789 0 0 69.693 109.28 105.61 93 0 0 65 111 102 2 0 0 1 2 2 9602.1 899 360 887 2082;2083 2380;2381 2380 2 AHMGMFTELAILYSK Unmodified 1710.8473 0.84733445 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 11.3 1.25 1 1 1 82.375 82.375 3;4 5.0489E-05 26357 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.297 72.012 39.516 36.703 9.738 80.436 81.812 68.034 37 37 9 75 83 65 1 1 1 2 2 2 9921.1 900 2185 888 2084;2085;2086 2382;2383;2384 2382 3 AHNIEDDSR Unmodified 1055.4632 0.46320036 2249 Q6PH08 Erc2 ERC protein 2 yes yes 0 0 0 0 2 1 1 1 23.012 23.012 3 0.00022742 3858 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.36 87.494 14.709 73.011 28.522 30.016 64.754 23.625 14 70 28 28 64 23 1 2 1 1 2 1 8840 901 2249 889 2087;2088 2385;2386 2385 2 AHPLFTFLR Unmodified 1100.6131 0.61309948 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 0 6.5 5.5 1 1 62.36 62.36 3 0.00011068 14795 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.52 89.326 0 19.914 18.063 75.192 17.855 19.745 0 19 19 74 19 19 0 1 1 2 1 1 34660 902 54 890 2089;2090 2387;2388 2388 2 AHPNLPILIR Unmodified 1142.6924 0.69241244 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 10 1.87 1 1 1 1 54.761 54.761 3 0.0012502 15409 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.928 59.88 89.954 74.066 111.71 81.104 114.29 0 84 74 111 75 111 0 2 2 2 2 2 0 59557 903 2914 891 2091;2092;2093;2094 2389;2390;2391;2392;2393 2390 5 AHPPELK Unmodified 790.43374 0.43373813 1720 P62309 Snrpg Small nuclear ribonucleoprotein G yes yes 0 0 0 0 5.5 0.5 1 1 37.933 37.933 3 0.018342 9591 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.682 40.08 98.832 130.25 83.855 0 205.77 191.34 93 130 83 0 203 185 1 2 1 0 2 2 7885.1 904 1720 892 2095;2096 2394;2395 2395 2 AHQAEGK Unmodified 739.3613 0.36130147 1867 P99029;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 9 4 1 1 22.622 22.622 3 0.0053338 3403 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.9 61.231 42.595 59.412 29.437 81.825 89.025 69.948 40 59 31 78 91 68 1 2 1 2 2 2 3276.4 905 1867 893 2097;2098 2396;2397 2396 2 AHQANQLYPFAISLIESVR Unmodified 2156.1378 0.13783747 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 84.281 84.281 3 0.00040344 26793 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.957 41.552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 906 3204 894 2099 2398 2398 1 AHQLVHEGYK Unmodified 1180.5989 0.59890598 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 7 0 1 35.63 35.63 4 0.024295 7933 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.308 24.21 0 68.266 53.473 67.858 0 0 0 65 56 65 0 0 0 1 1 1 0 0 1371.3 907 134 895 2100 2399 2399 1 AHQLVMEGYNWCHDR Unmodified 1914.8254 0.82537023 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 6 0 1 50.036 50.036 4 0.00012307 15375 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.919 57.48 48.89 0 78.667 25.915 0 69.29 46 0 74 28 0 65 1 0 1 1 0 1 4375.8 908 1731;1787 896 2101 2400 2400 1 AHQLWLSVEALK Unmodified 1393.7718 0.77178497 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 10 0 1 70.779 70.779 3 0.0031056 20883 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.555 24.813 0 0 36.574 77.668 55.008 0 0 0 37 74 56 0 0 0 1 1 1 0 2896.1 909 2517 897 2102 2401 2401 1 AHQVASSQDR Unmodified 1097.5214 0.52138394 2777 Q91YR5 Mettl13 Methyltransferase-like protein 13 yes yes 0 0 0 0 4 0 1 18.218 18.218 3 0.010178 2547 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.927 26.541 0 0 4.985 9.5399 0 0 0 0 5 9 0 0 0 0 1 1 0 0 496.2 910 2777 898 2103 2402 2402 1 AHQVVEDGYEFFAK Unmodified 1638.7678 0.7678218 1710;1711;1770 P62137;P62141;A0A0J9YUU8;P63087;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 7.5 2.63 1 2 1 1 1 65.789 65.789 3;4 5.8362E-25 22916 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.43 116.85 392.87 338.57 408.96 299.36 407.25 518.34 370 343 408 297 418 500 5 4 4 4 5 6 75349 911 1710;1711;1770 899 2104;2105;2106;2107;2108;2109 2403;2404;2405;2406;2407;2408;2409 2406 7 AHSDGGDGVVSQVK Unmodified 1354.6477 0.64770667 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7 4.24 2 1 39.192 39.192 3;4 5.2824E-12 11420 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.07 78.99 88.375 56.275 219.61 239.15 137.06 154.92 83 56 213 232 139 149 2 1 2 2 2 2 39750 912 1362 900 2110;2111;2112 2410;2411;2412 2410 3 AHSEDAIR Unmodified 897.43044 0.43044367 771 D3Z3R3;P97930 Dtymk Thymidylate kinase yes no 0 0 0 0 6 4.97 1 1 1 22.528 22.528 3 0.0032519 3870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.548 53.036 80.29 36.631 0 44.972 97.747 48.005 75 37 0 42 97 46 2 1 0 2 3 1 9843.3 913 771 901 2113;2114;2115 2413;2414;2415 2414 3 AHSLKPK Unmodified 779.46537 0.46537261 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 1 10 0 1 33.034 33.034 4 0.044085 5250 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.981 14.343 138.45 0 175.5 101.03 0 159.9 130 0 167 102 0 150 1 0 1 1 0 1 7620.6 914 204 902 2116 2416 2416 1 AHSLNTVK Unmodified 868.47667 0.47666558 1279 O88845 Akap10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 0 8 0 1 33.284 33.284 3 0.010655 6322 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.42 34.345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 915 1279 903 2117 2417 2417 1 AHSNILK Unmodified 781.44464 0.44463717 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7.5 0.5 1 1 35.391 35.391 3 0.0079091 7048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.116 43.236 268.21 109.89 93.535 179.65 234.58 269.4 251 111 93 167 241 259 2 1 1 1 2 2 35104 916 2517 904 2118;2119 2418;2419 2419 2 AHSSMVGVNLPQK Unmodified 1366.7027 0.70271913 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 8.4 1.5 2 1 1 1 49.053 49.053 3;4 2.7955E-07 12599 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.09 80.415 413.97 62.785 522.14 316.32 54.503 444.03 389 65 501 315 56 418 5 1 5 4 1 4 78544 917 1334 905 2120;2121;2122;2123;2124 2420;2421;2422;2423;2424 2423 5 AHSTVETER Unmodified 1028.4887 0.48868683 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 2.5 0.5 1 1 19.589 19.589 3 0.00036293 3065 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.635 68.162 9.657 6.2818 6.1151 15.302 9.414 0 9 6 6 14 9 0 1 1 1 1 1 0 4544.2 918 570 906 2125;2126 2425;2426 2425 2 AHSVDVEK Unmodified 883.43995 0.43994572 2623 Q8QZT2 Ccsap Centriole, cilia and spindle-associated protein yes yes 0 0 0 0 5 0 1 34.302 34.302 3 0.016286 8431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.047 26.544 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 2039.7 919 2623 907 2127 2427 2427 1 AHTCFNR Unmodified 904.39737 0.3973694 844;1559;2195 P46935;E9Q4K9;E9PYU8;Q9CUN6;A2A5Z6;E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8;Q6I6G8 Nedd4;Smurf1;Smurf2;Nedd4l;Hecw2 E3 ubiquitin-protein ligase NEDD4;E3 ubiquitin-protein ligase SMURF1;E3 ubiquitin-protein ligase SMURF2;E3 ubiquitin-protein ligase NEDD4-like;E3 ubiquitin-protein ligase HECW2 no no 0 0 0 0 6 0 1 24.402 24.402 3 0.0091064 3873 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.496 68.281 0 29.405 23.122 0 0 29.848 0 28 23 0 0 28 0 1 1 0 0 1 2308.2 920 1559;844;2195 908 2128 2428 2428 1 AHTDFFEAFK Unmodified 1211.5611 0.56112349 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 8 0 1 64.855 64.855 3 3.0271E-05 20859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.48 64.517 108.83 0 103.76 135.91 0 138.58 102 0 102 130 0 130 1 0 1 1 0 1 8969.7 921 1692 909 2129 2429 2429 1 AHTMTDDVTFWK Unmodified 1450.6551 0.65510023 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.75 0.829 2 1 1 62.094 62.094 3;4 3.9272E-27 20219 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 171.67 150.41 295.65 177.16 319.47 247.54 210.54 339.38 278 186 315 241 222 324 3 3 3 2 3 4 47861 922 2185 910 2130;2131;2132;2133 2430;2431;2432;2433 2432 4 AHVDEFK Unmodified 844.40792 0.40791731 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 5.5 0.5 1 1 40.636 40.636 3 0.0046478 11521 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.71 75.189 196.68 54.372 260 140.22 281.42 85.248 185 56 250 139 278 83 2 1 2 1 2 1 13944 923 2783 911 2134;2135 2434;2435 2434 2 AHVFQIDPNTK Unmodified 1268.6513 0.65133548 3402 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 0 0 0 0 7 0 1 51.085 51.085 3 0.049858 15066 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.94 21.737 79.128 54.248 0 99.906 92.689 0 74 56 0 93 93 0 1 1 0 1 1 0 4107 924 3402 912 2136 2436 2436 1 AHVFQIDPSTK Unmodified 1241.6404 0.64043645 3262 Q9QWW1 Homer2 Homer protein homolog 2 yes yes 0 0 0 0 8 0 1 51.565 51.565 3 0.0071661 14621 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.841 30.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 925 3262 913 2137 2437 2437 1 AHVFQIDPTTK Unmodified 1255.6561 0.65608651 2830 Q99JP6;Q501M9 Homer3 Homer protein homolog 3 yes no 0 0 0 0 8 0 1 52.696 52.696 3 0.00019858 15140 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.548 58.32 59.808 55.551 0 0 0 59.696 56 56 0 0 0 56 1 1 0 0 0 1 3292.4 926 2830 914 2138 2438 2438 1 AHVIGTPCSK Unmodified 1068.5386 0.53861391 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 8.5 1.12 1 1 1 1 37.284 37.284 3 1.2057E-05 7661 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.79 68.766 60.925 136.44 52.172 97.046 169.64 138.84 60 130 56 93 171 134 2 3 1 1 3 2 27124 927 1093 915 2139;2140;2141;2142 2439;2440;2441;2442 2441 4 AHVIVMAATNRPNSIDPALR Unmodified 2145.1477 0.14769065 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 9.2 4.17 1 1 1 2 52.471 52.471 3;4 0.0001197 12432 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.172 36.918 39.543 99.455 65.007 48.148 88.838 48.077 37 97 65 47 88 47 1 3 2 2 3 2 33874 928 1875 916 2143;2144;2145;2146;2147 2443;2444;2445;2446;2447 2445 5 AHVLAASVEQATQNFLEK Unmodified 1955.0112 0.011239973 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 9.5 0.5 1 1 77.732 77.732 3;4 0.019043 26461 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.697 14.374 29.802 47.998 0 0 28 0 28 47 0 0 28 0 1 1 0 0 1 0 5694.1 929 799 917 2148;2149 2448;2449 2448 2 AHVLYFK Unmodified 876.48577 0.48577371 341 A0A1Y7VL44;E9Q6P5 Ttc7b yes no 0 0 0 0 10.5 0.5 1 1 51.328 51.328 3 0.0053045 12258 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.285 55.185 78.772 0 105.8 376.58 98.43 377.75 74 0 102 352 102 357 1 0 1 2 1 2 27733 930 341 918 2150;2151 2450;2451 2450 2 AHVSPQK Unmodified 765.41334 0.41333704 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 7 0 1 28.133 28.133 3 0.01397 4644 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.912 33.892 88.527 0 89.36 0 160.67 134 83 0 83 0 158 130 1 0 1 0 1 1 5201.3 931 1275 919 2152 2452 2452 1 AHVTLGCAADVQPVQTGLDLLDILQQVK Unmodified 3001.5907 0.59065607 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8 0 1 98.836 98.836 4 3.7361E-12 35318 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.602 50.991 20.346 8.2041 0 0 16.957 24.034 19 9 0 0 17 23 1 1 0 0 2 2 3259.4 932 1390 920 2153 2453;2454 2453 2 AHWEVER Unmodified 925.44061 0.44061443 3184 Q9ERG2;B2RQS1 Strn3 Striatin-3 yes no 0 0 0 0 4 0 1 35.253 35.253 3 0.038156 9324 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.554 35.569 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 987.95 933 3184 921 2154 2455 2455 1 AIAAHWQAAAAHWQQQQQQR Unmodified 2327.142 0.14202842 710 D3YWX2;E9Q803;Q9R0I7 Ylpm1 YLP motif-containing protein 1 yes no 0 0 0 0 12 0 1 52.092 52.092 4 0.0035591 11200 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.798 32.09 48.958 0 67.174 65.311 91.988 66.665 46 0 65 65 93 65 1 0 1 1 1 1 3903.9 934 710 922 2155 2456 2456 1 AIADHIR Unmodified 794.43989 0.43988615 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 6 0.816 1 1 1 33.191 33.191 2 0.012542 7383 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.62 76.769 127.22 116.43 160.1 48.161 121.91 154.29 120 120 157 46 120 148 2 2 2 1 1 2 21582 935 1373 923 2156;2157;2158 2457;2458;2459 2458 3 AIAELGIYPAVDPLDSTSR Unmodified 1987.0262 0.026221336 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 8 2.96 1 2 3 2 83.383 83.383 2;3;4 8.9945E-27 32393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.95 115.84 204.01 295.36 402.23 172.29 157.94 374.99 192 292 398 170 161 356 5 8 11 5 5 10 439920 936 1642 924 2159;2160;2161;2162;2163;2164;2165;2166 2460;2461;2462;2463;2464;2465;2466;2467;2468;2469;2470;2471 2470 12 AIAGDEHR Unmodified 867.41988 0.41987898 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 3.5 0.5 1 1 23.024 23.024 3 0.00039074 4219 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.28 69.383 49.017 68.125 119.25 164.77 43.654 49.036 46 65 121 158 46 46 1 1 2 2 1 1 18846 937 2080 925 2167;2168 2472;2473 2472 2 AIAGIINQPYYNYQAGPDAALGR Unmodified 2435.2234 0.22335801 3362 Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 yes no 0 0 0 0 9 0 1 75.492 75.492 3 1.3696E-10 25186 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.765 60.946 0 38.743 37.37 7.6097 0 0 0 37 37 9 0 0 0 1 1 1 0 0 5649.2 938 3362 926 2169 2474 2474 1 AIAGTGANVIVTGGK Unmodified 1327.746 0.74596415 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 9.25 4.82 1 1 1 1 58.037 58.037 2;3 4.9353E-22 20069 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 139.86 90.507 128.29 76.842 65.088 135.77 139.49 117.35 120 75 65 129 139 112 3 2 2 3 3 3 19816 939 1543 927 2170;2171;2172;2173 2475;2476;2477;2478 2478 4 AIAHYEQSADYYK Unmodified 1557.71 0.70997257 1478;3106 Q9DB05;P28663 Napa;Napb Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein no no 0 0 0 0 9.5 3.5 1 1 49.379 49.379 3 1.3324E-07 15048 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.79 68.249 79.402 0 0 79.361 80.872 66.982 74 0 0 74 83 65 1 0 0 1 1 1 8274.6 940 3106;1478 928 2174;2175 2479;2480 2479 2 AIAHYEQSADYYKGEESNSSANK Unmodified 2561.1306 0.13063942 1478;3106 Q9DB05;P28663 Napa;Napb Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein no no 0 0 0 1 5 0 2 49.129 49.129 4;5 2.2751E-23 15623 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.86 107.21 118.26 107.09 252.98 54.776 192.56 146.56 111 111 241 56 186 139 1 2 3 1 2 2 21634 941 3106;1478 929 2176;2177 2481;2482;2483;2484 2483 4 AIAIAGR Unmodified 670.41261 0.41260876 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 7.5 0.5 1 1 42.167 42.167 2 0.027691 10111 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.926 34.255 640.18 663.27 767.47 484.13 824.45 778.11 604 676 769 489 835 752 2 2 2 1 2 2 118540 942 1850;2212 930 2178;2179 2485;2486 2486 2 AIANECQANFISIK Unmodified 1577.7872 0.78717704 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9.33 2.62 1 1 1 66.011 66.011 3;4 2.4617E-06 22188 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.55 83.324 118.75 70.729 67.846 186.92 216.97 95.082 111 74 65 176 213 93 1 1 1 2 2 1 29250 943 1875 931 2180;2181;2182 2487;2488;2489 2487 3 AIAQASK Unmodified 687.39154 0.39153897 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 37.259 37.259 2 0.012888 7924 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.88 25.843 228.48 171.09 46.184 0 175.02 173.03 214 176 46 0 173 167 2 2 1 0 1 1 19329 944 141 932 2183;2184 2490;2491 2491 2 AIAVLTSGGDAQGMNAAVR Unmodified 1800.9152 0.9152311 1568 P47857;A0A2R8VHV2;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 8.5 0.5 1 1 63.652 63.652 2;3 9.8195E-22 19591 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.552 83.286 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 2129.4 945 1568 933 2185;2186 2492;2493 2493 2 AIAYLFPSGLFEK Unmodified 1454.781 0.78095267 3080 Q9D7N3 Mrps9 28S ribosomal protein S9, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 93.144 93.144 2;3 1.8767E-07 26717 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.89 74.892 16.095 0 0 0 0 42.452 15 0 0 0 0 41 1 0 0 0 0 2 4563.9 946 3080 934 2187;2188 2494;2495 2495 2 AICLDHAK Unmodified 926.46439 0.46438634 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 7 0 1 42.959 42.959 3 0.0086334 11236 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.073 34.642 78.533 102.24 59.43 98.107 0 78.884 74 102 65 93 0 74 1 1 1 1 0 1 3558.7 947 1813 935 2189 2496 2496 1 AICQLVK Unmodified 830.46841 0.46840908 2519 Q8CBE3;H3BJR7;H3BJS1;H3BJB3 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 10 0 1 55.505 55.505 2 0.033655 13989 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.454 10.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 948 2519 936 2190 2497 2497 1 AIDAFNAALTVRPEDYSLWNR Unmodified 2421.2077 0.20770795 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 1 8.5 0.5 1 1 82.063 82.063 3 1.0741E-06 29016 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.869 43.243 29.952 18.196 0 30.604 0 0 28 19 0 28 0 0 1 1 0 1 0 0 3978.1 949 721 937 2191;2192 2498;2499 2498 2 AIDFVDVTESNAR Unmodified 1435.6943 0.69432251 2359 Q8BFQ8 Pddc1 Parkinson disease 7 domain-containing protein 1 yes yes 0 0 0 0 5 0 1 66.223 66.223 2 0.0063404 23606 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60 20.695 20.212 0 29.347 19.018 0 20.254 19 0 28 19 0 19 1 0 1 1 0 1 3658.9 950 2359 938 2193 2500 2500 1 AIDIYEQVGTSAMDSPLLK Unmodified 2050.0293 0.029257803 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 8.67 3.09 1 1 1 84.958 84.958 3 3.9439E-06 33170 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.556 43.484 20.346 8.2041 0 28 47.467 18.9 19 9 0 28 46 19 1 1 0 1 1 1 6243.3 951 3106 939 2194;2195;2196 2501;2502;2503 2503 3 AIDLFTDAIK Unmodified 1105.6019 0.60192568 2856 Q99L47;F8WJK8;E9Q1V0 St13 Hsc70-interacting protein yes no 0 0 0 0 9.25 2.28 1 1 1 1 80.281 80.281 2;3 2.7869E-09 28159 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.96 84.025 20.197 164.58 216.47 65.867 113.53 214.22 19 158 212 65 112 204 1 3 4 1 2 4 41739 952 2856 940 2197;2198;2199;2200 2504;2505;2506;2507 2505 4 AIDLLYWR Unmodified 1048.5706 0.57056597 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 9.5 0.5 1 1 79.395 79.395 2 0.015629 24724 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.265 37.953 236.61 82.956 377.76 198.33 113.16 200.41 223 83 363 204 111 188 2 1 2 2 1 1 28093 953 2583 941 2201;2202 2508;2509 2509 2 AIDVEQGQTR Unmodified 1115.5571 0.55710075 1521 P35505 Fah Fumarylacetoacetase yes yes 0 0 0 0 3.5 0.5 1 1 39.418 39.418 2 3.1097E-05 11257 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.96 95.783 39.516 36.703 40.034 39.595 44.987 72.27 37 37 37 37 46 69 1 1 1 1 1 2 8068.1 954 1521 942 2203;2204 2510;2511 2511 2 AIEAAENGDFSEVR Deamidation (N) 1507.6791 0.67906638 3118 Q9DBC0 Selo Selenoprotein O yes yes 0 1 0 0 2 0 2 55.298 55.298 2;3 9.3978E-05 18543 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.763 65.783 0 18.576 0 0 19.197 19.706 0 18 0 0 19 19 0 2 0 0 1 1 2403.6 955 3118 943 2205;2206 2512;2513 2512 1086 2 AIEDEGGNPDEIEVTSECNK Unmodified 2204.9379 0.93793619 716 S4R1M2;D3YXK2;S4R2Q5 Safb Scaffold attachment factor B1 yes no 0 0 0 0 1.5 0.5 1 1 56.967 56.967 3 9.2272E-11 19381 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.231 71.327 69.379 17.545 46.642 66.904 72.351 57.631 65 19 46 65 74 56 2 1 1 1 1 1 9389.7 956 716 944 2207;2208 2514;2515 2515 2 AIEEAER Unmodified 816.39775 0.39774656 469 A2AI52;Q80U87 Usp8 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 8 yes no 0 0 0 0 2 0.816 1 1 1 34.669 34.669 2 0.0093753 9331 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 124.37 39.109 430.72 654.09 633.63 527.24 410.93 725.95 408 652 641 524 423 692 3 3 2 3 1 3 98311 957 469 945 2209;2210;2211 2516;2517;2518 2517 3 AIEEGYR Unmodified 836.40283 0.40283194 1880 Q03137 Epha4 Ephrin type-A receptor 4 no no 0 0 0 0 3.5 0.5 1 1 37.475 37.475 2 0.011182 10868 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.52 76.707 78.578 62.429 85.664 79.672 122.91 0 74 65 83 74 121 0 1 1 1 1 2 0 15518 958 1880 946 2212;2213 2519;2520 2519 2 AIEINPDSAQPYK Unmodified 1444.7198 0.71980898 2856 Q99L47;F8WJK8 St13 Hsc70-interacting protein yes no 0 0 0 0 6.5 0.5 1 1 59.888 59.888 3 2.7698E-05 20016 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.55 70.745 187.38 103.51 158.43 120.5 122.63 69.29 176 102 158 121 120 65 2 1 2 2 1 1 26697 959 2856 947 2214;2215 2521;2522 2521 2 AIEIYEQVGANTMDNPLLK Unmodified 2118.0667 0.066705942 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 6.75 0.829 2 1 1 84.321 84.321 3;4 6.0825E-08 31355 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.169 78.616 118.14 90.64 84.315 78.679 0 78.884 111 94 83 74 0 74 3 3 2 2 0 2 17061 960 1478 948 2216;2217;2218;2219 2523;2524;2525;2526 2523 4 AIEIYEQVGANTMDNPLLK Deamidation (N) 2119.0507 0.050721527 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 1 0 0 13 0 1 84.077 84.077 3 4.6845E-07 32831 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.049 65.95 39.516 36.703 0 49.593 36.424 0 37 37 0 46 37 0 1 1 0 1 1 0 5990.6 961 1478 948 2220 2527 2527 547 1 AIELFSVGQGPAK Unmodified 1315.7136 0.71360139 1249 O70310 Nmt1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 0 8.5 0.5 1 1 71.982 71.982 2;3 5.5027E-37 23539 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 157.68 119.37 0 58.665 54.978 47.001 0 0 0 56 56 46 0 0 0 1 1 1 0 0 6843.8 962 1249 949 2221;2222 2528;2529 2529 2 AIELNPANAVYFCNR Unmodified 1750.8461 0.8460889 317 Q8BJU0;A0A1W2P6P1;A0A1W2P7I5 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 8 0 1 70.972 70.972 3 0.00099761 23768 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.724 40.152 0 38.265 65.999 45.687 34.954 48.039 0 37 65 46 37 46 0 1 1 1 1 1 5399 963 317 950 2223 2530 2530 1 AIELQPHFPDAYCNLANALK Unmodified 2284.131 0.13103753 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 7 0 1 79.086 79.086 3 0.0059736 28203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.856 16.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 964 2543 951 2224 2531 2531 1 AIELSLK Unmodified 772.46945 0.46945494 1807 P70297;Q3UGN9;A2ARJ0 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 8 0 1 63.842 63.842 2 0.047225 20333 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.282 5.1441 0 0 129.84 0 0 88.478 0 0 120 0 0 83 0 0 1 0 0 1 6595.4 965 1807 952 2225 2532 2532 1 AIEMLGGELGSK Unmodified 1203.6169 0.61692381 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 70.737 70.737 2;3 1.5977E-07 26141 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.37 59.576 207.28 64.466 127.11 76.258 105.01 157.78 194 65 120 74 102 149 3 2 2 2 2 3 27065 966 1857 953 2226;2227;2228;2229 2533;2534;2535;2536 2536 4 AIENIDTLTNLESLFLGK Unmodified 1990.0623 0.062272491 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 8.71 1.91 2 2 2 1 104.55 104.55 3;4 1.6197E-09 36406 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.75 83.946 62.036 49.985 26.447 61.88 27.857 48.51 58 49 25 57 27 46 5 3 3 4 2 4 25707 967 1995 954 2230;2231;2232;2233;2234;2235;2236 2537;2538;2539;2540;2541;2542;2543 2539 7 AIEPNEYK Unmodified 962.47091 0.4709115 3084 Q9D7X8 Ggct Gamma-glutamylcyclotransferase yes yes 0 0 0 0 5 0 1 48.086 48.086 2 0.010928 15028 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.502 28.82 0 69.16 0 71.045 0 0 0 65 0 65 0 0 0 1 0 1 0 0 4339.6 968 3084 955 2237 2544 2544 1 AIEPPPLDAVIEAEHTLR Unmodified 1970.0473 0.047291129 16 A0A087WPL5;E9QNN1 Dhx9 yes no 0 0 0 0 4.5 0.5 1 1 77.493 77.493 3 1.0349E-06 28984 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.543 53.313 59.786 47.699 67.566 59.456 65.711 20.254 56 47 65 56 65 19 3 2 3 3 3 1 9924.9 969 16 956 2238;2239 2545;2546;2547;2548;2549 2546 5 AIEQADLLQEEDESPR Unmodified 1841.8643 0.86430096 1704 P61967 Ap1s1 AP-1 complex subunit sigma-1A yes yes 0 0 0 0 2 0.816 1 1 1 59.717 59.717 2;3 3.8268E-08 20687 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.169 73.263 19 38.952 24.874 69.249 16.693 0 19 37 28 65 19 0 1 1 1 1 1 0 7955 970 1704 957 2240;2241;2242 2550;2551;2552 2551 3 AIEQSIEQEEGLNR Unmodified 1614.7849 0.78492843 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 4 3.78 1 2 2 1 1 56.423 56.423 2;3 5.8222E-149 19692 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 256.71 210.71 332 214.39 309.16 311.35 314.15 387.2 311 223 305 306 320 371 6 5 5 6 4 6 524870 971 1696 958 2243;2244;2245;2246;2247;2248;2249 2553;2554;2555;2556;2557;2558;2559;2560 2557 8 AIEQSIEQEEGLNR Deamidation (N) 1615.7689 0.76894402 1696 P61264 Stx1b Syntaxin-1B yes yes 0 1 0 0 1.8 0.748 2 2 1 57.956 57.956 2;3 8.545E-24 19908 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 151.13 119.26 100.12 75.477 96.352 88.35 56.911 87.92 94 75 93 84 56 84 4 3 3 4 2 4 28815 972 1696 958 2250;2251;2252;2253;2254 2561;2562;2563;2564;2565;2566 2565 656 6 AIFAGYK Unmodified 768.41703 0.41702544 1241 O55142 Rpl35a 60S ribosomal protein L35a yes yes 0 0 0 0 10 0 1 59.414 59.414 2 0.049024 15714 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.805 38.152 0 125.55 127.27 131.45 162.36 182.98 0 120 130 130 167 176 0 1 1 1 1 1 25063 973 1241 959 2255 2567 2567 1 AIFASGSPFDPVTLPDGR Unmodified 1845.9261 0.92611336 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 8 0 1 81.979 81.979 2 0.00018127 28987 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.179 47.37 0 0 0 20.767 0 20.254 0 0 0 19 0 19 0 0 0 1 0 1 2449.2 974 1317 960 2256 2568 2568 1 AIFHEEEPR Unmodified 1126.5407 0.5407224 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 4.5 0.5 1 1 40.112 40.112 3 0.011446 11245 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.191 37.249 39.516 36.703 0 50.278 0 49.036 37 37 0 46 0 46 1 1 0 1 0 1 5376.6 975 1220 961 2257;2258 2569;2570 2570 2 AIFLADGK Unmodified 833.4647 0.46470391 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 11 2 1 1 62.894 62.894 2 0.0019795 19365 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.34 71.357 254.81 262.12 413.62 0 0 498.89 241 269 398 0 0 468 2 2 2 0 0 2 36097 976 3335 962 2259;2260 2571;2572 2571 2 AIFLADGNVFTTGFSR Unmodified 1714.8679 0.8678702 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 9.25 4.82 1 1 1 1 85.031 85.031 3 6.9478E-06 26680 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.6 75.321 126.48 58.63 57.074 0 8.727 78.635 121 56 56 0 9 74 3 1 1 0 1 2 47447 977 3336 963 2261;2262;2263;2264 2573;2574;2575;2576 2574 4 AIFLFVDK Unmodified 951.54295 0.54295423 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 0 12 0.816 1 1 1 83.198 83.198 2 0.0010385 26071 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 146.35 89.25 326.4 211.67 228.49 268.75 483.74 321.07 306 213 231 264 481 310 4 3 3 4 4 5 60054 978 1671 964 2265;2266;2267 2577;2578;2579;2580;2581;2582 2578 6 AIFMIPTNPPPTFR Unmodified 1600.8436 0.8435697 381 A0A2I3BQE0;Q9JI11;Q9JI10 Stk4;Stk3 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit;Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit yes no 0 0 0 0 12 0 1 80.13 80.13 3 0.0010753 21746 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.898 37.019 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3142.2 979 381 965 2268 2583 2583 1 AIFQAIAAK Unmodified 931.5491 0.54910224 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 8.33 5.22 2 1 2 1 69.585 69.585 2;3 0.00083021 17558 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.476 56.104 323.91 816.45 708.46 777.72 570.76 625.35 305 799 715 760 570 590 2 6 3 5 3 4 130960 980 3142 966 2269;2270;2271;2272;2273;2274 2584;2585;2586;2587;2588;2589 2587 6 AIFQTIQNR Unmodified 1089.5931 0.59309232 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 11 0 1 56.052 56.052 2 0.0094423 13961 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.1 41.292 0 47.696 74.678 56.757 0 0 0 46 74 56 0 0 0 1 1 1 0 0 12785 981 3164 967 2275 2590 2590 1 AIFSHAAGDNSTLLSFK Unmodified 1777.8999 0.89989861 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 9.5 0.5 1 1 69.778 69.778 3 1.4562E-08 22522 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.37 85.572 226.98 200.19 93.638 223.57 194.74 243.88 213 204 93 213 204 232 2 2 1 2 2 1 24135 982 607 968 2276;2277 2591;2592 2591 2 AIFSVLDLMK Unmodified 1135.6311 0.63111731 2453 Q8BTG3 Tcp11l1 T-complex protein 11-like protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 95.503 95.503 2;3 0.0015513 31077 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.662 37.231 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1279.8 983 2453 969 2278;2279 2593;2594 2593 2 AIFSVYVVNK Unmodified 1138.6386 0.63864553 2025 Q3V493;Q9ES56 Trappc4 Trafficking protein particle complex subunit 4 yes no 0 0 0 0 8 4.97 1 1 1 73.604 73.604 2;3 0.00028551 19108 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.629 51.607 78.91 48.245 41.761 36.882 56.882 59.696 74 51 42 37 56 56 2 2 1 1 1 1 17607 984 2025 970 2280;2281;2282 2595;2596;2597 2597 3 AIFTGYYGK Unmodified 1018.5124 0.51238239 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 9.89 3.35 1 1 2 2 2 1 64.342 64.342 2;3 7.8848E-06 15655 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 153.71 109.26 697.98 447.88 1745.2 859.4 1569.7 1369.3 654 438 1714 861 1564 1319 7 4 9 8 7 6 466590 985 1390 971 2283;2284;2285;2286;2287;2288;2289;2290;2291 2598;2599;2600;2601;2602;2603;2604;2605;2606;2607;2608 2606 11 AIGAVPLIQGEYMIPCEK Unmodified 1988.0111 0.011105318 1049 F8WIR1;P18242;F6Y6L6;A0A1B0GT66 Ctsd Cathepsin D yes no 0 0 0 0 10.2 2.77 1 1 2 81.919 81.919 3;4 5.058E-07 28944 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.484 72.991 68.967 65.117 121.31 173.55 35.225 38.437 65 65 120 166 37 37 2 2 3 4 1 1 22899 986 1049 972 2292;2293;2294;2295 2609;2610;2611;2612 2610 4 AIGEDFVLLK Unmodified 1103.6227 0.62266112 1081 Q9JM52;G3X9G2;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 7 0 1 78.325 78.325 2 0.0041458 27795 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.934 17.961 39.181 35.772 57.052 26.853 18.64 0 37 37 56 28 19 0 1 1 1 1 1 0 3046.1 987 1081 973 2296 2613 2613 1 AIGHVIEEGGVK Unmodified 1207.6561 0.65608651 3384;402 A0A2R8W6V9;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 5.75 0.829 2 1 1 50.139 50.139 3;4 9.959E-09 16165 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.63 84.886 128.81 187.83 183.8 367.82 317.18 348.04 121 186 186 352 324 333 2 3 3 5 4 4 67718 988 402;3384 974 2297;2298;2299;2300 2614;2615;2616;2617;2618 2614 5 AIGIDPGYSK Unmodified 1019.5288 0.52876073 317 Q8BJU0;A0A1W2P6P1;A0A1W2P7I5 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 7 0 1 56.994 56.994 3 0.00068485 17748 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.338 55.952 48.675 34.657 85.468 45.184 0 49.036 46 37 83 46 0 46 1 1 1 1 0 1 5552.5 989 317 975 2301 2619 2619 1 AIGMSLAK Unmodified 789.44186 0.44185998 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 10 0 1 57.597 57.597 2 0.0036717 14967 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.99 54.232 0 124.55 187.03 127.32 192.89 0 0 120 185 130 190 0 0 1 1 1 1 0 13923 990 150 976 2302 2620 2620 1 AIGNAAK Unmodified 643.36532 0.36532422 1581 P48722;E0CY23;A0A0N4SW76;A0A0N4SVU2 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 8 0.816 1 1 1 36.908 36.908 2 0.012506 7516 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.7 58.058 280.71 248.72 219.34 175.68 113.51 302.7 264 255 222 167 111 287 3 3 2 1 1 3 28484 991 1581 977 2303;2304;2305 2621;2622;2623 2623 3 AIGNALK Unmodified 685.41227 0.41227441 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 0 13 0 1 47.456 47.456 2 0.026931 15130 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.734 34.209 308.64 0 244.77 275.37 157.41 165 289 0 239 268 168 159 1 0 1 1 1 1 20281 992 3156 978 2306 2624 2624 1 AIGNIELGIR Unmodified 1054.6135 0.61349341 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.5 0.5 1 1 64.788 64.788 2 0.0050616 21412 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.465 30.493 88.473 130.7 99.099 66.836 54.204 116.78 83 130 102 65 56 111 1 2 2 1 1 2 42476 993 1382 979 2307;2308 2625;2626 2625 2 AIGSASEGAQSSLQEVYHK Unmodified 1960.949 0.94903365 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 5.5 0.5 1 1 55.287 55.287 3 7.9393E-36 17829 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 147.17 118.54 39.701 19.61 36.227 59.049 86.818 69.29 37 19 37 56 83 65 1 1 1 1 1 1 13039 994 3400 980 2309;2310 2627;2628 2628 2 AIGVKPPR Unmodified 836.52322 0.52322184 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 11 1.41 1 1 1 1 1 39.111 39.111 3 0.0093708 7511 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.097 59.899 2572.3 1557.4 2574.7 2423.5 1526.9 1834.6 2418 1614 2569 2384 1566 1758 6 5 6 7 4 4 155240 995 1875 981 2311;2312;2313;2314;2315 2629;2630;2631;2632;2633;2634;2635 2631 7 AIGVLTSGGDAQGMNAAVR Unmodified 1786.8996 0.89958103 2507;1357 P12382;Q8C605;Q9WUA3 Pfkl;Pfkp ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 0 7.5 0.5 1 1 61.17 61.17 2;3 4.8208E-14 19165 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.62 82.773 0 67.938 73.075 65.467 64.983 0 0 65 74 65 65 0 0 1 1 1 1 0 13046 996 1357;2507 982 2316;2317 2636;2637 2637 2 AIGVSNQR Unmodified 843.45626 0.45626449 583 B1ASZ3;Q64516;Q9WU65 Gyk;Gk;Gk2 Glycerol kinase;Glycerol kinase 2 yes no 0 0 0 0 7 0 1 32.933 32.933 2 0.015359 6614 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.753 37.801 48.732 44.531 67.413 0 27.631 48.248 46 46 65 0 28 46 1 1 1 0 1 1 4189.6 997 583 983 2318 2638 2638 1 AIGWGNK Unmodified 744.39187 0.39187332 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 49.123 49.123 2;3 0.0064766 12867 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.42 69.93 467.29 469.4 664.3 456 582.13 0 440 478 655 440 564 0 3 4 4 3 3 0 192830 998 1265 984 2319;2320;2321;2322;2323 2639;2640;2641;2642;2643 2641 5 AIHNIFR Unmodified 869.48717 0.48717069 2612;2611 Q8K3H0;Q8K3G9 Appl1;Appl2 DCC-interacting protein 13-alpha;DCC-interacting protein 13-beta no no 0 0 0 0 9.5 0.5 1 1 43.624 43.624 3 0.0054091 10251 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.048 66.241 39.147 56.185 45.429 17.391 35.558 68.275 37 56 46 19 37 65 1 1 1 1 1 1 6915.8 999 2612;2611 985 2324;2325 2644;2645 2644 2 AIHSWLTR Unmodified 982.53485 0.53484916 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 46.937 46.937 2;3 0.0013311 10350 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.29 68.503 49.063 148.96 49.525 207.76 0 39.442 46 140 46 194 0 37 1 2 1 3 0 1 51041 1000 1864 986 2326;2327;2328;2329 2646;2647;2648;2649 2648 4 AIIDGTESVSR Unmodified 1146.5881 0.58806652 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 7 3.16 1 1 1 1 1 48.087 48.087 2 1.9743E-80 15078 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 189.18 135.3 149.18 194.61 268.8 334.92 285.83 357.48 140 195 269 326 297 343 3 3 3 4 3 4 72282 1001 644 987 2330;2331;2332;2333;2334 2650;2651;2652;2653;2654 2654 5 AIIEDLEPR Unmodified 1054.5659 0.56587452 2461 Q8BUK6;F6W1A2 Hook3 Protein Hook homolog 3 yes no 0 0 0 0 4 0 1 64.245 64.245 2 0.01466 22787 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.825 24.743 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 3361 1002 2461 988 2335 2655 2655 1 AIIFQGNTNPTDVVLGVFSK Unmodified 2119.1314 0.13135511 1843 P97333 Nrp1 Neuropilin-1 yes yes 0 0 0 0 10.5 0.5 1 1 94.471 94.471 3 1.0255E-05 30667 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.338 41.215 0 0 30.296 0 19.874 0 0 0 28 0 19 0 0 0 1 0 1 0 2583.6 1003 1843 989 2336;2337 2656;2657 2657 2 AIIIFVPVPQLK Unmodified 1336.8482 0.84824438 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 8.67 5.44 1 1 1 91.995 91.995 3 0.00057396 36505 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.82 48.596 9.657 29.493 17.911 19.7 47.137 58.351 9 28 19 19 46 56 1 1 1 1 1 2 3783.1 1004 996 990 2338;2339;2340 2658;2659;2660 2660 3 AIIKPQYVDQIPK Unmodified 1511.8712 0.87116466 1694 P61222 Abce1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 1 9.5 0.5 1 1 61.816 61.816 3 0.0005098 18811 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.563 62.179 29.457 94.775 131.03 85.262 147.36 133.31 28 93 130 83 149 129 1 2 2 1 2 2 10464 1005 1694 991 2341;2342 2661;2662 2661 2 AIILNTPHNPLGK Unmodified 1386.7983 0.79833407 101 A0A0G2JGE1;Q71RI9 Ccbl2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 0 11 0 1 59.697 59.697 3 0.00015623 15599 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.153 33.432 0 0 0 121 0 0 0 0 0 121 0 0 0 0 0 1 0 0 6650 1006 101 992 2343 2663 2663 1 AIINSTITPNMTFTK Unmodified 1650.8651 0.86509301 3402 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 0 0 0 0 10.5 0.5 1 1 72.912 72.912 3 2.6189E-21 21986 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.69 78.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1007 3402 993 2344;2345 2664;2665 2664 2 AIIQSGSALSSWAVNYQPVK Unmodified 2118.111 0.11095402 462 A2AGI2;Q8BYM5;A2AGI0;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 8.33 5.19 1 2 79.057 79.057 3;4 3.352E-11 21347 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.92 83.385 74.751 19.892 79.655 24.901 87.063 111.85 70 19 75 23 88 107 2 1 2 1 3 2 9680.8 1008 462 994 2346;2347;2348 2666;2667;2668 2668 3 AILAELTGR Unmodified 942.54983 0.54983053 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 68.561 68.561 2 5.143E-08 22073 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 162.25 98.946 1000.2 687.1 1385.1 605.63 1274.9 1275.2 941 726 1344 620 1285 1227 2 3 4 2 4 4 350870 1009 1520 995 2349;2350;2351;2352 2669;2670;2671;2672;2673 2671 5 AILDDLLK Unmodified 899.53278 0.53278348 735 D3Z041;P41216 Acsl1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 0 7.5 0.5 1 1 80.889 80.889 2 0.011271 29113 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.114 18.902 39.366 66.506 0 39.57 111.3 0 37 65 0 37 111 0 1 1 0 1 2 0 5330.2 1010 735 996 2353;2354 2674;2675 2674 2 AILFLPLPVSSD Unmodified 1270.7173 0.71728978 1689 P61148 Fgf1 Fibroblast growth factor 1 yes yes 0 0 0 0 11.4 1.02 1 2 1 1 107.02 107.02 2;3 2.3751E-08 35225 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.93 93.426 6.3802 5.32 9.7058 38.674 8.9835 17.536 6 5 9 37 9 17 1 1 1 2 1 2 20469 1011 1689 997 2355;2356;2357;2358;2359 2676;2677;2678;2679;2680;2681;2682 2679 7 AILGEVK Unmodified 728.44324 0.44324019 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 8 0.816 1 1 1 56.307 56.307 2 0.011634 16803 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.56 18.345 304.76 239.89 332.89 492.45 191.51 519.01 287 250 336 472 195 492 2 2 2 3 1 3 57816 1012 3094 998 2360;2361;2362 2683;2684;2685 2684 3 AILIFNNHGK Unmodified 1125.6295 0.62947783 3149 Q9DCR2;A0A286YD58;A0A286YDU3 Ap3s1 AP-3 complex subunit sigma-1 yes no 0 0 0 0 12 0 1 56.452 56.452 3 9.0045E-05 12758 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.331 62.465 48.747 44.571 64.939 55.46 99.849 125.07 46 46 65 56 102 120 1 1 1 1 1 1 6905.1 1013 3149 999 2363 2686 2686 1 AILIFNNHGKPR Unmodified 1378.7834 0.78335271 3149 Q9DCR2;A0A286YD58;A0A286YDU3 Ap3s1 AP-3 complex subunit sigma-1 yes no 0 0 0 1 1 0 1 50.766 50.766 4 0.0035057 15345 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.806 31.015 99.789 0 0 87.945 147.51 94.929 93 0 0 83 148 93 1 0 0 1 1 1 9281.1 1014 3149 1000 2364 2687 2687 1 AILITGCDSGFGFSLAK Unmodified 1755.8866 0.88655673 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 85.281 85.281 3 0.00024238 26935 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.237 33.574 9.5583 19.571 0 40.441 0 29.848 9 19 0 37 0 28 1 1 0 1 0 1 4695.8 1015 2336 1001 2365;2366 2688;2689 2688 2 AILNLQWPYK Unmodified 1244.6917 0.69174374 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 0 8.33 5.19 1 2 80.695 80.695 2;3 0.0001409 21985 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.43 72.344 130.43 94.209 0 90.727 154.95 99.138 122 93 0 84 149 93 4 3 0 2 3 1 16237 1016 1547 1002 2367;2368;2369 2690;2691;2692;2693 2692 4 AILNLQWPYK Deamidation (N) 1245.6758 0.67575932 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 1 0 0 11 0 1 80.734 80.734 2 0.026471 24964 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.26 33.259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1017 1547 1002 2370 2694 2694 576 1 AILPCIK Unmodified 813.47825 0.47824549 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 0 10.3 0.471 2 1 63.116 63.116 2 0.017672 17472 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.24 0 403.44 342.22 613.17 350.86 430.58 643.3 380 354 602 352 441 615 2 2 3 2 2 3 56515 1018 1679 1003 2371;2372;2373 2695;2696;2697 2696 3 AILQQLGLNSTCDDSILVK Unmodified 2087.0933 0.093255043 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 10.9 1.45 2 2 2 1 2 85.118 85.118 3;4 1.0737E-19 27228 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.36 110.53 99.222 372.03 209.57 310.6 328.99 48.071 93 362 204 297 325 46 3 8 3 6 7 1 137110 1019 1055 1004 2374;2375;2376;2377;2378;2379;2380;2381;2382 2698;2699;2700;2701;2702;2703;2704;2705;2706;2707;2708;2709;2710;2711 2705 14 AILQQLGLNSTCDDSILVK Deamidation (N) 2088.0773 0.077270628 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 1 0 0 9 0 1 89.273 89.273 3 1.2469E-06 31513 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.11 56.444 0 0 12.984 0 0 9.594 0 0 12 0 0 9 0 0 1 0 0 1 2771.5 1020 1055 1004 2383 2712 2712 277 1 AILSELLQR Unmodified 1041.6182 0.61824444 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560 Kalrn Kalirin yes no 0 0 0 0 10 0 1 76.438 76.438 2 0.0007454 23330 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.39 72.621 89.059 0 0 79.931 50.561 126.48 83 0 0 74 56 120 1 0 0 1 1 1 7547.2 1021 545 1005 2384 2713 2713 1 AILSHLVK Unmodified 879.55419 0.55418762 570;1041 B0V2P5;Q8BPN8;F6RYL8;B0V2P6;F8WGX5;Q6PNC0 Dmxl2;Dmxl1 DmX-like protein 2;DmX-like protein 1 no no 0 0 0 0 8 4.97 1 1 1 56.422 56.422 2;3 0.00073442 13875 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.62 78.372 377.43 284.8 458.07 366.56 95.923 447.11 355 297 456 362 99 422 1 1 3 3 2 3 69116 1022 570;1041 1006 2385;2386;2387 2714;2715;2716 2715 3 AILSYLAAK Unmodified 948.56442 0.56441796 1445 P24472;A0A1L1SS61 Gsta4 Glutathione S-transferase A4 yes no 0 0 0 0 7 6 1 1 75.787 75.787 2 3.7702E-06 26340 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 157.86 104.39 207.31 278.36 338.79 327.55 398.06 367.34 195 279 343 325 407 353 3 4 5 5 5 3 46541 1023 1445 1007 2388;2389 2717;2718;2719;2720;2721 2718 5 AILTTIGVLEEPLGNAR Unmodified 1765.9938 0.993799 1086 G3X9K4;Q8R3Q2 Ppp6r2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 0 0 0 0 9 0 1 86.641 86.641 3 0.00013603 30293 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.186 43.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2468.7 1024 1086 1008 2390 2722 2722 1 AILVDLEPGTMDSVR Oxidation (M) 1630.8236 0.82362212 2283;1863;2975;3183 P99024;Q7TMM9;Q9CWF2;Q9ERD7;A0A1D5RM76 Tubb5;Tubb2a;Tubb2b;Tubb3 Tubulin beta-5 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 0 0 1 0 6.44 2.41 4 3 1 1 71.593 71.593 2;3 7.8012E-05 25536 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.654 70.422 366.53 236.13 269.61 288.66 375.68 383.7 344 243 261 278 380 370 10 8 6 8 8 9 82304 1025 1863;2283;2975;3183 1009 2391;2392;2393;2394;2395;2396;2397;2398;2399 2723;2724;2725;2726;2727;2728;2729;2730;2731;2732;2733;2734;2735;2736 2723 154 14 AILVDLEPGTMDSVR Unmodified 1614.8287 0.8287075 2283;1863;2975;3183 P99024;Q7TMM9;Q9CWF2;Q9ERD7;A0A1D5RM76 Tubb5;Tubb2a;Tubb2b;Tubb3 Tubulin beta-5 chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 0 0 0 0 7.8 2.79 1 1 1 1 1 76.186 76.186 2;3 5.2558E-151 27778 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 261.49 203.9 704.99 536.94 581.99 314.81 773.81 665.17 662 551 569 316 769 637 8 9 6 5 8 8 538070 1026 1863;2283;2975;3183 1009 2400;2401;2402;2403;2404 2737;2738;2739;2740;2741;2742;2743;2744;2745;2746;2747;2748 2742 12 AIMGSGK Unmodified 662.34215 0.34214594 1845 P97355;E9PZ58 Sms Spermine synthase yes no 0 0 0 0 9 0 1 42.941 42.941 2 0.027535 10014 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.62 54.674 44.334 49.925 80.75 33.871 93.434 66.624 42 51 79 37 93 65 1 1 1 1 1 1 3530 1027 1845 1010 2405 2749 2749 1 AIMNLDVEQYR Unmodified 1350.6602 0.66018561 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 7 0 1 66.123 66.123 2 0.00025452 22045 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.171 62.083 88.52 26.473 68.073 95.477 54.316 127.44 83 28 65 92 56 121 2 1 1 2 1 2 5446.7 1028 2179 1011 2406 2750;2751 2751 2 AINEAYKEDYHK Unmodified 1479.6994 0.69940789 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 1 6 0 1 44.873 44.873 4 0.050864 12876 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.878 21.421 108.37 109.33 87.422 136.88 0 108.73 102 111 93 130 0 102 1 1 1 1 0 1 7809.9 1029 1050;1380 1012 2407 2752 2752 1 AINPINTFTK Unmodified 1117.6132 0.61315906 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 9.5 0.5 1 1 64.711 64.711 2;3 4.0456E-05 17992 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.91 63.404 39.701 0 80.068 61.208 143.48 124.89 37 0 74 56 139 121 1 0 1 1 1 2 21969 1030 2047 1013 2408;2409 2753;2754 2754 2 AINQGGLTSVAVR Unmodified 1284.715 0.71499837 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 0 9.33 2.62 1 1 1 52.122 52.122 2 9.7304E-28 15639 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 178.49 113.65 108.5 77.727 93.459 150.95 46.146 118.33 102 78 93 144 46 111 3 2 2 3 1 2 29131 1031 3256 1014 2410;2411;2412 2755;2756;2757 2755 3 AINQIAAALFTIHK Unmodified 1509.8667 0.86674799 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 1 0 2 84.382 84.382 3 5.0963E-08 29752 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.7 93.147 39.237 37.008 46.584 17.29 37.249 19.191 37 38 46 19 37 19 1 1 1 1 1 1 2323.9 1032 513 1015 2413;2414 2758;2759 2758 2 AINVFISANR Unmodified 1103.6087 0.60874239 1046 F8WI55;Q8VE70 Pdcd10 Programmed cell death protein 10 yes no 0 0 0 0 11 0 1 62.555 62.555 2 0.001088 16769 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.732 51.23 69 0 0 0 0 0 69 0 0 0 0 0 1 0 0 0 0 0 9593.6 1033 1046 1016 2415 2760 2760 1 AINVQEEK Unmodified 929.48181 0.48181054 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 3.16 1 1 1 1 1 45.189 45.189 2 0.0012023 13671 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.75 38.361 306.67 511.68 232.89 354.14 383.83 380.27 288 504 232 336 391 367 2 4 2 3 2 2 143600 1034 551 1017 2416;2417;2418;2419;2420 2761;2762;2763;2764;2765 2762 5 AINWPEDIVFPALDILR Unmodified 1981.0673 0.067298289 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 8 0 1 107.99 107.99 3 2.4031E-05 36816 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.188 49.584 12.858 0 3.0432 3.0976 0 0 12 0 3 3 0 0 1 0 1 1 0 0 644.36 1035 1466 1018 2421 2766 2766 1 AIPAGCGDEEEEEEESILDTVLK Unmodified 2532.1425 0.14250924 1835 P84086 Cplx2 Complexin-2 yes yes 0 0 0 0 5.6 3.77 2 1 1 1 89.554 89.554 3;4 6.9015E-16 35437 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.396 74.381 55.379 37.705 84.618 23.936 11.027 48.721 52 37 81 24 11 46 3 4 4 3 1 4 56200 1036 1835 1019 2422;2423;2424;2425;2426 2767;2768;2769;2770;2771 2771 5 AIPDLDCASK Unmodified 1088.5172 0.51720977 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 5.5 0.5 1 1 58.09 58.09 2 0.0049689 19129 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.552 39.981 0 38.929 26.259 38.181 36.948 0 0 37 28 37 37 0 0 1 1 1 1 0 2238.3 1037 573 1020 2427;2428 2772;2773 2773 2 AIPDLTAPVAAVQAAVSNLVR Unmodified 2075.1739 0.17388863 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 7.6 5.43 2 1 1 1 106.22 106.22 3 5.2388E-62 29347 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 162.42 146.64 6.339 21.839 42.489 16.878 6.1079 74.374 6 21 40 16 6 71 2 2 3 3 2 7 34830 1038 2182 1021 2429;2430;2431;2432;2433 2774;2775;2776;2777;2778;2779;2780;2781 2780 8 AIPEAPVGR Unmodified 908.50797 0.50796571 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 5.5 0.5 1 1 46.294 46.294 2 0.00094231 13572 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.12 54.021 137.26 147.06 69.292 95.309 154.91 143.75 129 148 74 93 157 139 2 2 1 1 2 2 37016 1039 195 1022 2434;2435 2782;2783 2783 2 AIPPGCGDEPEEEDESILDTVIK Unmodified 2512.1527 0.15268 1767 P63040 Cplx1 Complexin-1 yes yes 0 0 0 0 3.2 0.4 4 1 82.028 82.028 3;4 9.7054E-08 30861 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.293 42.364 44.519 42.96 58.551 9.3533 20.412 44.637 43 42 57 9 20 42 3 3 5 1 2 3 7291.6 1040 1767 1023 2436;2437;2438;2439;2440 2784;2785;2786;2787;2788;2789;2790;2791;2792 2788 9 AIPQEKPIFLSVEDTSFQWVDSLK Unmodified 2776.4323 0.43234774 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 1 7 0 1 94.829 94.829 4 2.2717E-05 35033 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.645 39.449 29.952 18.196 0 0 38.761 28.742 28 19 0 0 38 28 1 1 0 0 1 1 1470.4 1041 1412 1024 2441 2793 2793 1 AIPQGGR Unmodified 697.38712 0.38712229 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 7 0 1 30.001 30.001 2 0.00081468 5400 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.87 63.687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1042 2322 1025 2442 2794 2794 1 AIQAELLK Unmodified 884.53312 0.53311783 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 7.5 0.5 1 1 61.087 61.087 2 0.0027938 19080 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.41 46.943 195.99 228.73 229.59 126.57 276.93 234.08 185 231 231 125 278 227 2 2 2 1 2 2 27963 1043 2952 1026 2443;2444 2795;2796 2796 2 AIQEFQTLFVDSK Unmodified 1524.7824 0.78240924 2007 Q3UUI3 Them4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 0 0 0 10.5 2.5 1 1 84.588 84.588 2 5.7828E-07 33051 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.43 90.557 29.514 66.196 58.259 9.837 0 39.442 28 65 56 9 0 37 1 2 1 1 0 1 4192.9 1044 2007 1027 2445;2446 2797;2798 2798 2 AIQIDTWLQVIPQLIAR Unmodified 1977.1411 0.14113193 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 12 0 1 107.36 107.36 3 2.3189E-12 29543 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 118.47 92.752 3.1821 0 6.208 6.0161 9.1376 0 3 0 6 6 9 0 1 0 1 1 1 0 608.15 1045 3243 1028 2447 2799;2800 2799 2 AIQLNPTYIR Unmodified 1187.6663 0.66625727 478 A2AJK8;Q91Z38 Ttc1 Tetratricopeptide repeat protein 1 yes no 0 0 0 0 8 0 1 60.837 60.837 2 0.006861 18993 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.614 23.052 39.25 41.359 40.828 43.473 0 44.772 37 42 42 42 0 42 1 1 1 1 0 1 4163.5 1046 478 1029 2448 2801 2801 1 AIQLSGTEQLEALK Unmodified 1499.8195 0.81952302 1270 O88544 Cops4 COP9 signalosome complex subunit 4 yes yes 0 0 0 0 9.5 3.5 1 1 70.867 70.867 3 0.00064792 25174 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.394 35.418 0 0 0 0 46.111 58.38 0 0 0 0 46 56 0 0 0 0 1 1 4724.5 1047 1270 1030 2449;2450 2802;2803 2802 2 AIQQLFGK Unmodified 903.5178 0.51780212 915 E9Q648;Q8CCB4;F6Z4G7;E9PYD3;E9Q3C3 Vps53 Vacuolar protein sorting-associated protein 53 homolog yes no 0 0 0 0 11.5 0.5 1 1 67.886 67.886 2 0.0013025 19077 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 142.64 99.512 0 153.34 327.3 0 84.521 66.878 0 148 311 0 83 65 0 1 2 0 1 1 25086 1048 915 1031 2451;2452 2804;2805 2804 2 AIQTDFVQYQPDLNTILEK Unmodified 2235.1423 0.14231373 2310 Q80U23 Snph Syntaphilin yes yes 0 0 0 0 7.5 0.5 1 1 86.651 86.651 3 3.6521E-05 31826 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.045 41.791 50.431 0 0 30.604 0 0 47 0 0 28 0 0 1 0 0 1 0 0 3743.3 1049 2310 1032 2453;2454 2806;2807 2806 2 AISFVGSNQAGEYIFER Unmodified 1886.9163 0.91627696 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 8.75 2.49 2 1 1 75.161 75.161 2;3 2.3899E-39 28361 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 159.4 132.43 88.74 120.42 76.046 95.784 108.24 175.2 83 120 74 93 111 167 2 4 1 2 3 3 33172 1050 3170 1033 2455;2456;2457;2458 2808;2809;2810;2811 2811 4 AISGPLPAPASPR Unmodified 1232.6877 0.68772099 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 8 0 1 52.832 52.832 2 0.00048383 15154 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.309 46.017 39.2 45.538 45.6 27.886 0 0 37 46 46 28 0 0 1 1 1 1 0 0 6892.6 1051 885 1034 2459 2812 2812 1 AISGVHTVR Unmodified 938.52976 0.52976379 3359 Q9Z0N1;Q9Z0N2;A2AAW9 Eif2s3x;Eif2s3y Eukaryotic translation initiation factor 2 subunit 3, X-linked;Eukaryotic translation initiation factor 2 subunit 3, Y-linked yes no 0 0 0 0 7 0 1 32.194 32.194 3 0.0021375 6241 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.269 53.709 39.064 30.049 81.65 41.04 0 63.96 37 32 79 42 0 60 1 1 1 1 0 1 11167 1052 3359 1035 2460 2813 2813 1 AISHEHSPSDLEAHFVPLVK Unmodified 2212.1277 0.12766671 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 6 0.816 1 1 1 59.213 59.213 5 5.8609E-12 18555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.36 86.537 237.15 100.2 182.2 155.08 287.8 232.43 222 102 176 148 287 222 3 2 3 2 3 3 30674 1053 2272 1036 2461;2462;2463 2814;2815;2816;2817 2817 4 AISIWESK Unmodified 932.49673 0.49673232 2682 Q8VCE6 Nt5m 5'(3')-deoxyribonucleotidase, mitochondrial yes yes 0 0 0 0 9 0 1 65.072 65.072 2 0.026421 20315 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.856 38.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1054 2682 1037 2464 2818 2818 1 AISLEGEPR Unmodified 970.50836 0.50835964 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2 Dlg2 Disks large homolog 2 yes no 0 0 0 0 5 0 1 48.502 48.502 2 0.041309 15264 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.859 25.388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1055 690 1038 2465 2819 2819 1 AISPTSATSSGR Unmodified 1133.5677 0.56766543 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 7 0 1 35.835 35.835 2 0.020223 7952 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.268 21.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1056 728 1039 2466 2820 2820 1 AISSYFVSTMSSSIK Unmodified 1606.7913 0.79125936 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 0 12 0 1 78.653 78.653 3 0.001133 21223 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.828 25.531 37.555 0 0 25.139 0 0 35 0 0 23 0 0 1 0 0 1 0 0 3811.7 1057 3296 1040 2467 2821 2821 1 AITGIQAFTVGK Unmodified 1204.6816 0.68157298 36 A0A0A0MQ68;Q60759 Gcdh Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 10.3 0.471 2 1 70.533 70.533 2;3 0.00025672 20842 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.54 39.713 39.613 82.545 0 61.208 0 0 37 84 0 56 0 0 1 2 0 1 0 0 9047.9 1058 36 1041 2468;2469;2470 2822;2823;2824 2823 3 AITHLNNNFMFGQK Unmodified 1633.8035 0.8034958 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 10.7 0.471 1 2 61.666 61.666 3;4 1.2294E-14 16250 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.592 82.193 207.41 62.636 73.011 153.84 189.93 172.6 194 65 74 148 194 167 2 1 1 2 2 2 20598 1059 1110 1042 2471;2472;2473 2825;2826;2827 2827 3 AITIAGIPQSIIECVK Unmodified 1711.9542 0.95424237 394 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8W6U6;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VI15;A0A2R8VI92 Pcbp2 Poly(rC)-binding protein 2 yes no 0 0 0 0 9.33 1.25 1 1 1 86.452 86.452 2;3 0.00061667 31108 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.011 38.326 0 0 0 0 28 19 0 0 0 0 28 19 0 0 0 0 1 1 5336.4 1060 394 1043 2474;2475;2476 2828;2829;2830 2828 3 AITIAGVPQSVTECVK Unmodified 1671.8866 0.88655673 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 69.23 69.23 2;3 2.9164E-05 23691 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.593 60.382 226.92 97.83 191.16 116.48 0 108.73 213 102 185 111 0 102 3 2 2 2 0 2 30590 1061 1668 1044 2477;2478;2479;2480 2831;2832;2833;2834 2832 4 AITSAYYR Unmodified 943.47633 0.47633123 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;G3UZL4;D3YYB3;Q9WTL2 Rab11b;Rab11a;Rab25 Ras-related protein Rab-11B;Ras-related protein Rab-11A;Ras-related protein Rab-25 yes no 0 0 0 0 13 0 1 44.686 44.686 2 0.01042 13732 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 55.192 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1062 1556 1045 2481 2835 2835 1 AITVASQTNCPLYVTK Unmodified 1764.908 0.90802046 836 Q3TT92;E9PWE8;Q62188;D3YUS0;D3Z567 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 9 1 1 1 63.873 63.873 3 1.3961E-17 20410 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.56 109.68 98.685 50.544 142.72 93.143 0 78.884 93 56 139 93 0 74 1 1 1 1 0 1 11834 1063 836 1046 2482;2483 2836;2837 2836 2 AITVSPVPFFNK Unmodified 1318.7285 0.72852317 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 11.2 0.829 1 1 2 79.62 79.62 2;3 1.7587E-27 21491 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 179.1 132.71 73.498 186.22 117.08 133.79 139.61 168.43 69 179 111 131 139 161 3 4 2 4 3 4 115970 1064 2306 1047 2484;2485;2486;2487 2838;2839;2840;2841;2842;2843 2842 6 AIVAGDQNVEYK Unmodified 1305.6565 0.65648044 454 A2AEX8;A2AEX6;P97447;A2AEX7;A2AEY1;A2AEY2 Fhl1 Four and a half LIM domains protein 1 yes no 0 0 0 0 6 0.816 1 1 1 53.201 53.201 3 0.00013782 16824 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.171 58.32 118.1 108.86 76.768 94.705 125.95 134.99 111 111 74 93 129 130 2 2 1 2 2 2 9616 1065 454 1048 2488;2489;2490 2844;2845;2846 2845 3 AIVAIENPADVSVISSR Unmodified 1739.9418 0.94176342 1374 P14206;A0A1L1SUK3 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 7.67 2.56 1 1 2 1 1 71.699 71.699 2;3 1.9717E-12 25582 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.47 102.94 138.77 304.05 219.19 180.48 257.39 212.52 130 298 222 176 259 204 2 6 5 4 4 4 51245 1066 1374 1049 2491;2492;2493;2494;2495;2496 2847;2848;2849;2850;2851;2852;2853 2848 7 AIVDALPPPCESACSLPTDVDK Unmodified 2354.1134 0.11339814 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 5 0 1 73.432 73.432 4 0.051322 26993 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 26.84 16.501 39.468 46.283 0 0 0 20.254 37 46 0 0 0 19 1 1 0 0 0 1 2385.8 1067 3085 1050 2497 2854 2854 1 AIVDCIISIIEENSESK Unmodified 1918.9558 0.95575851 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 10 0 1 111.14 111.14 3 3.3785E-06 34210 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.833 62.778 0 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 416.16 1068 3291 1051 2498 2855 2855 1 AIVNNAFK Unmodified 875.4865 0.48650199 530 A2AVR6;Q8VHQ9 Acot11 Acyl-coenzyme A thioesterase 11 yes no 0 0 0 0 9.5 0.5 1 1 54.154 54.154 2 0.0032066 15087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.37 36.384 118.79 61.15 0 80.882 0 0 111 65 0 74 0 0 1 1 0 1 0 0 5194.9 1069 530 1052 2499;2500 2856;2857 2856 2 AIVPESK Unmodified 742.4225 0.42250475 2835 Q99JY8 Ppap2b Lipid phosphate phosphohydrolase 3 yes yes 0 0 0 0 7 0 1 46.419 46.419 2 0.026973 12840 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 46.55 79.128 54.248 0 71.045 0 69.29 74 56 0 65 0 65 1 1 0 1 0 1 12264 1070 2835 1053 2501 2858 2858 1 AIVPILLDANVSTYDK Unmodified 1730.9455 0.94545182 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9.75 1.98 3 2 1 2 85.944 85.944 2;3;4 8.8347E-25 27510 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 140.1 121.74 178.79 141.52 266.77 153.06 163.36 166.49 168 139 259 149 158 158 4 3 4 3 4 3 141950 1071 1160 1054 2502;2503;2504;2505;2506;2507;2508;2509 2859;2860;2861;2862;2863;2864;2865;2866 2864 8 AIVPILLDANVSTYDKIR Unmodified 2000.1306 0.13062683 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 10.3 0.943 1 2 81.027 81.027 3;4 4.3314E-06 27902 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.819 45.17 89.414 91.133 43.399 127.74 44.558 49.036 84 92 46 120 46 46 2 2 1 2 1 1 10779 1072 1160 1055 2510;2511;2512 2867;2868;2869 2867 3 AIVQLKPR Unmodified 923.59164 0.59163576 3266 Q9QXS1;E9Q3W4;A0A0R4J218 Plec Plectin yes no 0 0 0 1 11 0 1 47.362 47.362 3 0.028346 10591 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.313 24.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37766 1073 3266 1056 2513 2870 2870 1 AIVQLVNK Unmodified 883.5491 0.54910224 2118 Q61205;D3Z7E6;D3Z2X5;Q8CA83 Pafah1b3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 0 10.5 0.5 1 1 61.113 61.113 2 0.00087793 16063 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 148.07 68.952 98.675 90.45 200.39 80.716 357.76 73.852 93 93 194 83 348 74 1 1 2 1 2 1 18312 1074 2118 1057 2514;2515 2871;2872 2872 2 AIVWGMQTR Unmodified 1060.5488 0.54878467 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 12 0 1 60.651 60.651 2 0.0061731 14417 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.119 40.132 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 5867.4 1075 2020 1058 2516 2873 2873 1 AIWAALQTQASSSAK Unmodified 1531.7995 0.79945628 2219 Q6P5E4;G3UYG7 Uggt1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 0 6.5 5.5 1 1 71.536 71.536 3 4.0713E-17 18223 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.17 73.836 20.387 0 0 0 38.702 0 19 0 0 0 37 0 1 0 0 0 1 0 3547.3 1076 2219 1059 2517;2518 2874;2875 2875 2 AIWNVINWENVTER Unmodified 1742.874 0.87401821 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 10.1 1.62 1 3 1 1 1 1 86.226 86.226 2;3 3.6599E-18 30202 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 133.98 87.567 98.961 123.38 281.15 154.49 224.87 117.02 93 121 274 153 223 111 3 4 8 4 5 2 223530 1077 1336 1060 2519;2520;2521;2522;2523;2524;2525;2526 2876;2877;2878;2879;2880;2881;2882;2883;2884;2885 2878 10 AIYAYALQVFPSK Unmodified 1469.7919 0.79185171 2778 Q91YR7 Prpf6 Pre-mRNA-processing factor 6 yes yes 0 0 0 0 12 0 1 83.851 83.851 3 0.035209 23293 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.021 21.643 0 29.336 27.266 28.497 25.624 68.559 0 28 28 28 28 65 0 1 1 1 1 1 1705.9 1078 2778 1061 2527 2886 2886 1 AIYHTLNLCNIDVTQK Unmodified 1901.9669 0.96693232 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9.5 0.5 1 1 65.756 65.756 3;4 3.4779E-25 20634 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142.1 109.1 169.06 0 79.767 68.547 347.26 57.544 158 0 74 65 343 56 2 0 1 1 3 1 30888 1079 1151 1062 2528;2529 2887;2888;2889 2887 3 AIYQATYR Unmodified 984.50288 0.50288033 1243 O55234;Q8BTY5 Psmb5 Proteasome subunit beta type-5 yes no 0 0 0 0 7.5 0.5 1 1 44.18 44.18 2 0.008761 11841 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102 90.591 187.56 148 91.152 0 178.16 172.94 176 148 93 0 176 167 2 1 1 0 2 2 19956 1080 1243 1063 2530;2531 2890;2891 2890 2 AKDELSAQAEVK Unmodified 1287.667 0.66704513 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 7.75 3.11 1 1 1 1 47.014 47.014 3;4 0.00059522 14842 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.367 53.113 324.7 172.99 284.81 268.44 86.095 372.78 305 185 278 259 93 352 4 3 3 3 1 4 30018 1081 2186 1064 2532;2533;2534;2535 2892;2893;2894;2895 2892 4 AKDEQSAVSMLK Unmodified 1305.6599 0.65985126 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 6.5 0.5 1 1 53.353 53.353 3 0.00063877 16048 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.853 45.165 231.93 105.32 244.38 199.67 174.03 178.39 218 111 241 199 181 172 2 1 2 2 2 2 21840 1082 2148 1065 2536;2537 2896;2897 2897 2 AKDGLVVFGK Unmodified 1032.5968 0.59678072 3001 Q9CZC8;D3YXW0 Scrn1 Secernin-1 yes no 0 0 0 1 10 0 1 59.75 59.75 3 0.0063529 15953 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.267 51.329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1083 3001 1066 2538 2898 2898 1 AKDINQEVYNFLATAGAK Unmodified 1952.0003 0.0003409361 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 10 1.51 1 2 2 1 1 82.237 82.237 3;4 1.4668E-34 28374 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.46 100.44 446.84 200.93 333.54 234.52 248.99 412.52 419 204 320 226 244 390 7 5 4 4 4 5 94059 1084 2843 1067 2539;2540;2541;2542;2543;2544;2545 2899;2900;2901;2902;2903;2904;2905;2906 2900 8 AKDLIITPATVLK Unmodified 1381.8545 0.85445197 1443 Q8CBC8;P24288;E9Q4K3;B2KFA8;B2KFA9 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 1 9.5 0.5 1 1 70.445 70.445 3 0.00026266 20697 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.632 47.849 207.06 209.53 187.7 269.2 259.57 180.21 195 213 187 261 261 176 2 2 1 2 1 1 18724 1085 1443 1068 2546;2547 2907;2908 2908 2 AKDPFAHLPK Unmodified 1122.6186 0.61857879 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 1 10.7 1.7 1 1 1 50.821 50.821 4 0.0026297 16137 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.551 20.613 517.94 808.4 725.77 712.94 415.05 939.03 488 804 734 699 425 892 2 3 2 3 2 3 65562 1086 3094 1069 2548;2549;2550 2909;2910;2911 2911 3 AKEEGSWK Unmodified 933.4556 0.45559579 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 1 9 2.94 1 1 1 41.473 41.473 3 0.027216 11654 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.056 33.925 2402.3 1766.3 1952.3 1943.8 955.52 2824.3 2258 1843 1971 1896 982 2675 3 3 2 2 2 3 253170 1087 1369 1070 2551;2552;2553 2912;2913;2914 2914 3 AKEEQELQDIQSR Unmodified 1572.7744 0.77436375 451 P35803;A2AEG6 Gpm6b Neuronal membrane glycoprotein M6-b yes no 0 0 0 1 4 0.816 1 1 1 47.397 47.397 3 3.6648E-15 15685 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.14 105.03 1039 478 626.97 192.22 377.24 1259.9 974 497 596 195 389 1192 4 2 3 2 3 4 116260 1088 451 1071 2554;2555;2556 2915;2916;2917;2918 2915 4 AKEGVVAAAEK Unmodified 1071.5924 0.59242362 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 1 13 0 1 43.114 43.114 3 0.00099413 12902 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.457 45.54 208.79 178.01 284.19 157.94 0 276.09 197 185 280 160 0 259 1 1 1 1 0 1 33271 1089 1232 1072 2557 2919 2919 1 AKEILQEEEDLAEIVQLVGK Unmodified 2253.2104 0.21039329 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 6.77 1.85 9 3 1 105.47 105.47 4 1.5751E-49 37761 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.65 143.72 189.15 97.447 322.05 204.49 274.12 220.46 178 98 309 202 275 213 14 11 13 13 13 11 28375 1090 1596 1073 2558;2559;2560;2561;2562;2563;2564;2565;2566;2567;2568;2569;2570 2920;2921;2922;2923;2924;2925;2926;2927;2928;2929;2930;2931;2932;2933;2934;2935;2936;2937;2938;2939;2940;2941 2923 22 AKFENLCK Unmodified 1008.5063 0.50625115 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 1 9 0 2 49.022 49.022 3;4 0.011985 12669 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.993 35.152 993.06 126.05 1088.9 971.12 995.82 1289.2 931 120 1058 965 1037 1236 1 1 2 2 2 2 63131 1091 1354 1074 2571;2572 2942;2943 2943 2 AKHPMDTEITK Unmodified 1269.6387 0.63872189 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 1 13 0 1 39.19 39.19 4 0.047903 11061 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.54 17.935 128.26 99.88 0 0 0 178.02 120 102 0 0 0 167 1 1 0 0 0 1 6084.5 1092 1401 1075 2573 2944 2944 1 AKLDENSAFLQFNWK Unmodified 1809.905 0.90498399 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 10.5 1.5 1 2 1 75.587 75.587 3;4 0.0023459 25154 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.261 39.213 78.993 26.368 46.342 77.468 34.655 286.78 74 28 46 74 37 278 2 1 1 2 1 3 14648 1093 551 1076 2574;2575;2576;2577 2945;2946;2947;2948 2945 4 AKLDNNTELSFFAK Unmodified 1596.8148 0.814772 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 1 9 0 1 67.617 67.617 3 0.0040096 21511 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.679 38.604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1094 1278 1077 2578 2949 2949 1 AKLEQLFQDEVAK Unmodified 1517.809 0.80895834 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 8 0 1 73.011 73.011 3 0.028156 24795 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.408 19.439 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 4151.6 1095 3266 1078 2579 2950 2950 1 AKPAETPAPAHK Unmodified 1216.6564 0.65642086 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 1 8.5 2.69 1 1 1 1 33.761 33.761 4 0.00030113 7109 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.522 55.859 406.15 342.9 439.25 423.9 578.14 568.48 381 343 415 412 590 544 4 3 3 3 5 4 63578 1096 3049 1079 2580;2581;2582;2583 2951;2952;2953;2954;2955 2952 5 AKPASPAR Unmodified 796.45554 0.45553621 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 8 0 1 26.757 26.757 3 0.055713 4081 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.908 18.433 157 128.74 194.21 161.12 0 285.69 148 134 194 158 0 268 1 1 1 1 0 1 9349.1 1097 510 1080 2584 2956 2956 1 AKPLATTQPAK Unmodified 1124.6554 0.65535823 860;1464 P27546;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 1 10 0 1 40.916 40.916 3 9.8893E-06 8149 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.59 44.529 59.803 0 47.837 36.672 48.817 82.821 56 0 46 37 51 79 1 0 1 1 1 1 5262.2 1098 1464;860 1081 2585 2957 2957 1 AKPLTDSER Acetyl (Protein N-term) 1057.5404 0.54038805 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 1 0 0 1 4.5 0.5 1 1 38.31 38.31 2 8.2737E-06 10742 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.313 20.596 368.49 246.46 255.59 215.63 219.49 292.22 346 259 256 215 226 280 2 2 1 1 1 2 60335 1099 2555 1082 2586;2587 2958;2959 2958 2 AKPVFEEPPNPTNVEASLQQMK Unmodified 2453.2261 0.22606013 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 1 7 0.816 1 1 1 72.41 72.41 4 1.4429E-11 25962 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.315 58.545 167.16 128.55 109.43 94.055 95.673 108.73 157 130 111 93 93 102 4 3 2 2 2 2 17933 1100 3232 1083 2588;2589;2590 2960;2961;2962;2963 2961 4 AKPVVSFIAGITAPPGR Unmodified 1679.9723 0.97227569 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 1 1 0 3 79.235 79.235 3;4 9.4916E-06 26476 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.866 82.635 399.47 233.59 155.47 57.234 122.89 326.2 374 232 157 56 120 306 4 4 3 1 2 3 20797 1101 3337 1084 2591;2592;2593 2964;2965;2966;2967;2968 2966 5 AKSQIALK Unmodified 857.53345 0.53345218 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 1 10 0 1 44.299 44.299 3 0.0088133 9442 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.731 13.246 117.57 97.687 174.24 0 200.43 103.01 111 102 167 0 195 102 1 1 1 0 1 1 10747 1102 1373 1085 2594 2969 2969 1 AKVDFILLK Unmodified 1045.6536 0.65356732 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 1 10.5 0.5 1 1 70.517 70.517 2;3 0.011893 20908 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.719 33.399 339.06 91.914 284.02 352.78 217.94 262.41 318 92 274 342 228 252 2 1 1 2 1 1 37173 1103 2479 1086 2595;2596 2970;2971;2972 2971 3 AKWDSWNK Unmodified 1033.4981 0.49812931 1499 P31786;Q4VWZ5;D3Z563 Dbi Acyl-CoA-binding protein yes no 0 0 0 1 9 0 1 54.028 54.028 3 0.043447 15045 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.067 35.841 529.94 411.31 754.14 406.56 517.72 523.56 500 432 739 422 530 505 1 1 1 1 1 1 35136 1104 1499 1087 2597 2973 2973 1 ALAAELNQLR Unmodified 1097.6193 0.61930707 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 8.5 2.69 1 1 1 1 62.839 62.839 2;3 4.016E-05 19831 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.07 75.333 88.053 131.42 57.626 98.215 0 0 83 130 65 93 0 0 1 1 1 1 0 0 21456 1105 1304 1088 2598;2599;2600;2601 2974;2975;2976;2977 2976 4 ALAAFLK Unmodified 732.45341 0.45341094 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722;D3YUG3;S4R223 Rps19 40S ribosomal protein S19 yes no 0 0 0 0 9.25 4.82 1 1 1 1 70.948 70.948 2 0.0060976 24240 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.79 59.118 355.47 457.67 472.83 500 706.18 483.59 334 454 472 491 706 463 4 5 5 5 5 4 139770 1106 3013 1089 2602;2603;2604;2605 2978;2979;2980;2981;2982;2983;2984 2979 7 ALAAGGVGSIVR Unmodified 1069.6244 0.62439245 2901 Q9CPW4;Q3UA72 Arpc5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 0 10 1.41 1 1 1 1 1 55.17 55.17 2 1.5575E-11 13755 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.75 76.5 237.32 336.81 153.36 103.01 311.39 154.57 223 334 157 102 306 148 2 4 2 2 3 2 89564 1107 2901 1090 2606;2607;2608;2609;2610 2985;2986;2987;2988;2989;2990 2988 6 ALADTENLR Unmodified 1001.5142 0.5141733 2864 Q99LP6 Grpel1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 5 0 1 45.435 45.435 2 0.0081895 13727 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.677 33.328 38.987 65.451 64.613 35.76 44.137 68.031 37 65 65 37 46 65 1 1 1 1 1 1 5479 1108 2864 1091 2611 2991 2991 1 ALADYIR Unmodified 820.4443 0.44430282 3046 Q9D1Q6 Erp44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 0 7.5 0.5 1 1 57.343 57.343 2 0.030245 18091 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.086 0 216.84 169.29 200.74 196.23 262.75 249.41 204 176 204 195 268 241 2 2 2 2 2 2 42494 1109 3046 1092 2612;2613 2992;2993 2992 2 ALAEDSDIFFDYSGR Unmodified 1704.7631 0.76313036 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 4 0 1 78.606 78.606 2 0.00010049 29325 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.72 79.846 12.8 15.097 0 9.6092 12.111 0 12 15 0 9 12 0 1 1 0 1 1 0 2221.6 1110 743 1093 2614 2994 2994 1 ALAEEAKR Unmodified 886.48723 0.48723027 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 6 0 1 35.367 35.367 3 0.022426 8476 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.073 0.82091 99.188 51.943 56.975 0 75.098 67.147 93 56 56 0 74 65 1 1 1 0 1 1 2194.4 1111 3266 1094 2615 2995 2995 1 ALAEEWSCPFMETSAK Unmodified 1855.8121 0.81207116 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 0 13 0 1 76.941 76.941 3 0.00016938 29328 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.335 49.651 39.468 46.283 0 0 77.404 0 37 46 0 0 74 0 1 1 0 0 1 0 4672.6 1112 1695 1095 2616 2996 2996 1 ALAENSGVK Unmodified 887.47125 0.47124585 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7.75 3.11 1 1 1 1 42.295 42.295 2;3 0.00092294 10947 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.88 48.682 207.39 314.33 267.92 254.14 290.09 320.05 195 315 270 251 299 308 2 4 2 2 3 3 25171 1113 1543 1096 2617;2618;2619;2620 2997;2998;2999;3000 2999 4 ALAESWNAAFLESSAK Unmodified 1693.8312 0.83115034 2798 Q921J2 Rheb GTP-binding protein Rheb yes yes 0 0 0 0 8 0 1 78.447 78.447 3 6.9896E-34 27284 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.16 100.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1114 2798 1097 2621 3001 3001 1 ALAFHPIEPVLITASEDHTLK Unmodified 2301.2369 0.23688281 1236 O55106;F8WH41 Strn Striatin yes no 0 0 0 0 7 0 1 72.452 72.452 4 0.00051402 25109 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.047 26.222 59.741 0 58.253 45.744 56.475 0 56 0 56 46 56 0 1 0 1 1 1 0 3761.9 1115 1236 1098 2622 3002 3002 1 ALAGCDFLTISPK Unmodified 1391.7119 0.71188683 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 10 2.16 1 1 1 74.449 74.449 2;3 4.9548E-21 24718 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 158.41 107.8 157.78 186.19 64.484 115.96 167.66 135.21 148 186 65 111 166 129 3 4 1 2 2 2 32104 1116 246 1099 2623;2624;2625 3003;3004;3005;3006 3005 4 ALAGHGGSR Unmodified 824.4253 0.42529871 1885 Q04690;A0A1W2P863 Nf1 Neurofibromin yes no 0 0 0 0 7 0 1 19.794 19.794 3 0.0012788 2953 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.986 42.892 0 0 5.2291 4.0603 0 4.264 0 0 5 4 0 4 0 0 1 1 0 1 530.46 1117 1885 1100 2626 3007 3007 1 ALAGLQSSSATPSPVPSPAR Unmodified 1892.9956 0.99558991 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 8.5 0.5 1 1 58.338 58.338 3 1.1539E-07 17067 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.712 49.873 59.851 46.934 0 49.766 27.202 87.702 56 46 0 46 28 83 2 1 0 2 1 2 10798 1118 2226 1101 2627;2628 3008;3009 3009 2 ALAGVTFAAK Unmodified 947.54402 0.54401687 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 10 0.816 1 1 1 62.889 62.889 2 2.4987E-08 17292 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 144.12 86.563 245.53 293.96 433.29 415.52 244.65 343.4 231 292 435 408 253 327 2 2 3 3 2 2 93277 1119 607 1102 2629;2630;2631 3010;3011;3012 3011 3 ALAHLLEAER Unmodified 1121.6193 0.61930707 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 8.5 2.69 1 1 1 1 55.903 55.903 3 0.0012862 17407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.434 49.005 209.14 133.94 371.26 444.36 651.09 426.23 195 133 360 438 651 413 3 2 1 3 2 2 70672 1120 3268 1103 2632;2633;2634;2635 3013;3014;3015;3016 3014 4 ALALVPGTPTR Unmodified 1094.6448 0.64479354 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10 0.816 1 1 1 58.599 58.599 2;3 5.0452E-08 14955 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.35 84.563 108.67 105.44 170.3 119.81 121.25 77.066 102 102 167 120 120 74 2 2 2 2 2 1 38892 1121 510 1104 2636;2637;2638 3017;3018;3019 3019 3 ALAMGYKPK Unmodified 977.53682 0.536823 2834 Q99JY0 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 1 11.5 0.5 1 1 50.244 50.244 3 0.00066362 10350 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.36 64.48 351.1 176.84 352.94 480.98 0 292.08 330 194 345 485 0 274 1 1 1 2 0 1 45626 1122 2834 1105 2639;2640 3020;3021 3021 2 ALANSLACQGK Deamidation (N) 1132.5547 0.55465791 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 0 8.12 2.93 1 2 2 1 2 52.243 52.243 2;3 1.9978E-16 15488 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 139.15 86.75 246.97 402.67 277.56 462.46 392.27 425.34 232 398 279 445 398 409 3 5 4 6 4 4 48966 1123 1309 1106 2641;2642;2643;2644;2645;2646;2647;2648 3022;3023;3024;3025;3026;3027;3028;3029 3024 367 8 ALANSLACQGK Unmodified 1131.5706 0.57064232 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 9.88 1.9 1 1 2 1 1 1 1 50.54 50.54 2;3 4.6013E-26 11891 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 185.29 123.3 1438.6 1526.8 1774.4 1581.9 1390.6 2090.2 1355 1554 1786 1558 1430 1994 7 8 7 7 5 8 767380 1124 1309 1106 2649;2650;2651;2652;2653;2654;2655;2656 3030;3031;3032;3033;3034;3035;3036;3037;3038;3039 3034 10 ALANVATVLAR Unmodified 1097.6557 0.65569258 1646 P57716 Ncstn Nicastrin yes yes 0 0 0 0 10 0 1 66.725 66.725 2 0.0023059 18955 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.916 45.283 0 0 0 59.804 74.657 0 0 0 0 56 74 0 0 0 0 1 1 0 5501.6 1125 1646 1107 2657 3040 3040 1 ALANVNIGSLICNVGAGGPAPAAGAAPAGGAAPSTAAAPAEEK Unmodified 3781.9057 0.90573563 1572 P47955 Rplp1 60S acidic ribosomal protein P1 yes yes 0 0 0 0 8 0 1 82.441 82.441 5 0.00056618 29171 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.667 22.123 39.468 46.283 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 0 9140.4 1126 1572 1108 2658 3041 3041 1 ALAPEYAK Unmodified 861.45962 0.45961853 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 7 0 1 49.83 49.83 2 0.052688 14399 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.546 5.3688 147.43 195.49 122.75 122.04 96.092 145.43 139 195 130 120 102 139 1 1 1 1 1 1 6603.7 1127 1331 1109 2659 3042 3042 1 ALAPQLAR Unmodified 838.50249 0.5024864 2766 Q91XH5;G3UXX3;Q64105;G3UZ79 Spr Sepiapterin reductase yes no 0 0 0 0 7.5 0.5 1 1 46.699 46.699 2 0.00036973 12291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 154.35 24.299 178.56 0 105.36 172.61 193.43 76.005 167 0 102 167 195 74 2 0 1 2 2 1 26589 1128 2766 1110 2660;2661 3043;3044 3044 2 ALAQALK Unmodified 713.44357 0.44357454 114 A0A0J9YU62;O88712;A0A0J9YUM4;Q91YZ2;P56546 Ctbp1;Ctbp2 C-terminal-binding protein 1;C-terminal-binding protein 2 yes no 0 0 0 0 10.5 0.5 1 1 52.302 52.302 2 0.0070672 12596 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.96 38.377 0 298.53 154.34 303.96 318.84 208.05 0 283 158 292 325 200 0 2 1 2 2 1 64111 1129 114 1111 2662;2663 3045;3046 3045 2 ALAQYLVVLSK Unmodified 1203.7227 0.72270951 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 4.67 5.19 2 1 85.396 85.396 2;3 1.0024E-16 30217 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.78 88.141 0 20.216 0 20.767 0 19.188 0 19 0 19 0 18 0 1 0 1 0 1 1572.8 1130 1083 1112 2664;2665;2666 3047;3048;3049 3048 3 ALASETNGTDSNGSNSSNIQ 2 Deamidation (N) 1967.8192 0.81920127 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 2 0 0 1.9 0.831 4 3 3 50.17 50.17 3 6.5754E-21 15111 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.39 123.81 220.63 346.94 289.08 357.85 245.92 265.61 207 340 292 346 249 253 9 12 11 12 9 10 209480 1131 1786 1113 2667;2668;2669;2670;2671;2672;2673;2674;2675;2676 3050;3051;3052;3053;3054;3055;3056;3057;3058;3059;3060;3061;3062;3063;3064;3065 3054 709;710;711;712 16 ALASETNGTDSNGSNSSNIQ Deamidation (N) 1966.8352 0.83518568 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 1 0 0 2 0 3 48.411 48.411 3 3.1291E-08 15542 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.586 64.441 14.952 34.104 0 0 33.709 23.556 14 33 0 0 33 23 1 2 0 0 2 2 6863 1132 1786 1113 2677;2678;2679 3066;3067;3068 3067 709;710;711;712 3 ALASEWKPEIR Unmodified 1298.6983 0.69828568 74;1367;71 A0A0A6YY47;E9Q589;A0A0A6YY91;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 9 2.35 1 2 1 57.655 57.655 3;4 2.4516E-14 18287 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 158.94 125.78 524.94 492.25 542.94 728.43 519.78 722.84 494 501 539 705 534 692 4 4 3 6 3 4 142470 1133 71;74;1367 1114 2680;2681;2682;2683 3069;3070;3071;3072;3073;3074 3069 6 ALASIDSK Unmodified 803.43888 0.43888309 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 7.5 0.5 1 1 51.279 51.279 2 0.011224 15138 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.302 38.292 78.549 72.065 82.208 64.612 81.55 66.963 74 74 83 65 83 65 1 1 1 1 1 1 5207.7 1134 2182 1115 2684;2685 3075;3076 3075 2 ALASLMTYK Unmodified 996.5314 0.53140327 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 9.25 4.82 1 1 1 1 70.667 70.667 2;3 1.2137E-25 17946 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 195.27 93.943 539.19 242.65 553.79 93.452 264.16 835.45 506 250 528 93 262 806 5 5 5 1 3 6 291410 1135 1458 1116 2686;2687;2688;2689 3077;3078;3079;3080;3081;3082;3083 3081 7 ALASQLQDSLK Unmodified 1172.6401 0.6401021 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 8 0 1 63.131 63.131 2 0.0029548 20039 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.416 41.54 0 32 0 0 0 0 0 32 0 0 0 0 0 1 0 0 0 0 3572.9 1136 2182 1117 2690 3084 3084 1 ALASVLLQALDR Unmodified 1268.7452 0.74523587 1898 Q0VGU4;A0A087WQ93 Vgf yes no 0 0 0 0 12 0 1 91.619 91.619 2 0.0021485 26091 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.334 39.129 9.612 8.9279 0 0 9.414 0 9 9 0 0 9 0 1 1 0 0 1 0 1735.5 1137 1898 1118 2691 3085 3085 1 ALASVLLQALDRPASPPSVPGGSQQGTPEEAAEALLTESVR Unmodified 4112.139 0.13896627 1898 Q0VGU4;A0A087WQ93 Vgf yes no 0 0 0 1 10 0 1 99.547 99.547 5 0.031342 32501 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 20.854 15.898 0 0 9.738 0 14.644 0 0 0 9 0 14 0 0 0 1 0 1 0 2007.5 1138 1898 1119 2692 3086 3086 1 ALATQLPVIPR Unmodified 1177.7183 0.71829284 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 9.67 0.471 1 2 66.327 66.327 2;3 0.00045867 20870 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.706 57.635 167.83 145.94 162.47 140.99 66.721 78.884 158 148 158 139 65 74 3 2 2 3 1 1 25725 1139 165 1120 2693;2694;2695 3087;3088;3089 3087 3 ALATSEAK Unmodified 789.42323 0.42323303 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 9.5 3.5 1 1 40.227 40.227 2 0.0080957 10793 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.74 38.487 59.431 54.502 64.265 56.014 72.522 67.221 56 56 65 56 74 65 1 1 1 1 1 1 5035.6 1140 2046 1121 2696;2697 3090;3091 3090 2 ALAVASK Unmodified 658.40138 0.40137537 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 9.5 0.5 1 1 46.128 46.128 2 0.021687 11323 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.12 44.758 217.27 25.068 251.19 156.63 0 228.12 204 28 241 157 0 214 2 1 2 2 0 2 24239 1141 1974 1122 2698;2699 3092;3093 3092 2 ALAVEGK Unmodified 686.39629 0.39629 2148;2186;842 Q68FG2;Q62261;A0A0A0MQG2;E9PX29;Q91ZE6 Sptbn2;Sptbn1;Sptbn4 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 9.33 2.62 1 1 1 46.481 46.481 2 0.021458 13065 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.39 25.013 831.05 801.12 852.76 961.11 997.73 1064.2 783 819 876 943 1031 1025 3 3 3 3 3 3 109830 1142 2186;2148;842 1123 2700;2701;2702 3094;3095;3096 3094 3 ALAVGGLGSIIR Unmodified 1125.687 0.68699271 3090 Q9D898 Arpc5l Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 11.3 1.25 1 1 1 71.402 71.402 2 1.0372E-48 21273 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 198.61 133.37 316.6 466.46 669.99 229.51 186.92 725.94 298 459 656 224 185 686 2 2 3 1 1 3 181870 1143 3090 1124 2703;2704;2705 3097;3098;3099 3097 3 ALAYFEQLK Unmodified 1081.5808 0.5807963 328 A0A1W2P7Q6;Q9CRT8 Xpot Exportin-T yes no 0 0 0 0 9 0 1 75.267 75.267 3 0.0013266 25097 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.474 33.012 0 0 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 1950.5 1144 328 1125 2706 3100 3100 1 ALCAEADR Unmodified 904.40727 0.40726539 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4 0 1 35.13 35.13 2 0.00021851 9252 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.34 84.858 455.47 0 454.42 386.07 0 0 427 0 438 378 0 0 1 0 1 1 0 0 86890 1145 551 1126 2707 3101 3101 1 ALCHLVLK Unmodified 952.55281 0.55280741 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 0 10 0 1 54.833 54.833 3 0.019366 13673 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.549 33.648 157.5 105.3 130.42 70.134 158.14 113.81 148 111 130 74 158 111 1 1 1 1 1 1 7735.5 1146 2994 1127 2708 3102 3102 1 ALCQPMK Unmodified 846.40918 0.40917964 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 0 1 46.196 46.196 2 0.023605 12139 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.692 54.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1147 2186 1128 2709 3103 3103 1 ALCSFQIYSVPWK Unmodified 1597.7963 0.79628516 1430 P21460 Cst3 Cystatin-C yes yes 0 0 0 0 11.5 0.5 1 1 83.699 83.699 3 9.3577E-08 23177 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.07 93.23 0 67.598 141.29 113.36 33.565 69.29 0 65 139 112 34 65 0 1 2 2 1 1 44740 1148 1430 1129 2710;2711 3104;3105 3105 2 ALCTGEK Unmodified 777.36909 0.36908897 2952;2849;3190 Q9ERU9;Q9CR16;Q99KR7 Ranbp2;Ppid;Ppif E3 SUMO-protein ligase RanBP2;Peptidyl-prolyl cis-trans isomerase D;Peptidyl-prolyl cis-trans isomerase F, mitochondrial no no 0 0 0 0 10 3 1 1 39.675 39.675 2 0.014379 9834 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.6 22.696 271.99 221.76 85.499 238.32 249.81 234.85 255 227 88 227 257 227 2 2 1 2 2 2 23356 1149 3190;2952;2849 1130 2712;2713 3106;3107 3106 2 ALDDFVLGSAR Unmodified 1162.5982 0.59823728 3213 Q9JIG8 Praf2 PRA1 family protein 2 yes yes 0 0 0 0 10 3 1 1 69.755 69.755 2 0.0047043 23929 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.704 23.569 127.62 117.53 92.11 134.47 55.013 156.2 120 120 93 129 56 148 2 2 1 2 1 2 10500 1150 3213 1131 2714;2715 3108;3109 3108 2 ALDEGDIALLK Unmodified 1156.634 0.63395408 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 5.5 0.5 1 1 72.85 72.85 3 0.00030059 26128 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.958 37.162 79.032 73.407 0 69.249 95.503 59.696 74 74 0 65 93 56 2 2 0 2 1 1 7911.4 1151 1555 1132 2716;2717 3110;3111 3111 2 ALDEVTSSQPPPPPPPPPPTQEAQETTPSLDEELSK Unmodified 3805.8422 0.84217512 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 3 0.707 1 2 1 72.583 72.583 4;5 0.0023759 27007 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 30.425 24.882 94.992 21.817 96.636 25.142 24.374 44.644 89 23 92 24 24 42 3 2 4 2 2 2 33012 1152 3267 1133 2718;2719;2720;2721 3112;3113;3114;3115 3113 4 ALDEYYDK Unmodified 1015.4498 0.44984171 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 7 3.54 1 1 1 1 55.302 55.302 2 0.00045659 18577 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.63 83.715 594.73 262.31 270.22 224.16 345.71 357.37 557 278 269 223 344 343 5 3 4 4 4 4 116920 1153 1596 1134 2722;2723;2724;2725 3116;3117;3118;3119;3120 3120 5 ALDEYYDKHFTEFVPLR Unmodified 2142.0422 0.042205751 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 7 0.816 1 1 1 71.281 71.281 4 2.4631E-06 25481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.325 54.672 138.39 244.74 77.14 129.9 256.34 250.66 130 240 74 120 259 242 2 3 1 1 3 3 30237 1154 1596 1135 2726;2727;2728 3121;3122;3123 3121 3 ALDFAVSEYNK Unmodified 1255.6085 0.60846762 1430 P21460;A2APX3 Cst3 Cystatin-C yes no 0 0 0 0 8.5 2.69 1 1 1 1 67.573 67.573 2;3 4.9643E-07 22891 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.62 79.869 226.7 129.3 200.47 185.09 313.44 189.37 213 130 195 185 314 185 4 2 2 3 4 3 30716 1155 1430 1136 2729;2730;2731;2732 3124;3125;3126;3127 3125 4 ALDFIASK Unmodified 863.47527 0.4752686 418;310 A1BN54;Q7TPR4;O88990;A0A1L1SV25;P57780;D3Z0L8;D3Z761 Actn1;Actn3;Actn4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 no no 0 0 0 0 10 1.87 1 1 1 1 67.733 67.733 2;3 0.0097414 21559 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.442 50.083 0 87.691 256.78 91.812 58.576 381.63 0 83 240 84 56 358 0 2 2 1 1 2 56830 1156 418;310 1137 2733;2734;2735;2736 3128;3129;3130;3131 3129 4 ALDGDFSEDNR Unmodified 1237.5211 0.52110917 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1 Tln2 Talin-2 yes no 0 0 0 0 2.33 0.471 2 1 48.869 48.869 2;3 0.0012863 15557 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.408 51.542 29.904 46.928 29.48 48.237 130.74 57.607 28 46 28 47 129 56 1 2 1 2 3 2 12857 1157 287 1138 2737;2738;2739 3132;3133;3134 3132 3 ALDGDFTEENR Unmodified 1265.5524 0.5524093 1450 P26039 Tln1 Talin-1 yes yes 0 0 0 0 2.5 0.5 1 1 50.418 50.418 2 0.0025527 16828 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.16 58.421 20.273 0 19.166 28.951 46.01 53.053 19 0 19 28 47 51 1 0 1 1 2 2 7428.1 1158 1450 1139 2740;2741 3135;3136 3136 2 ALDGPEQMELEEGK Acetyl (Protein N-term) 1586.7134 0.71340297 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 1 0 0 0 1.5 0.5 1 1 71.095 71.095 2;3 0.0011959 24033 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.21 34.975 0 0 36.788 0 32.426 0 0 0 34 0 31 0 0 0 2 0 2 0 9791.9 1159 1713 1140 2742;2743 3137;3138 3137 2 ALDGYSK Unmodified 752.37047 0.37046918 1401;1400 P17426;P17427;A0A0J9YUA7 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 6.5 0.5 1 1 46.661 46.661 2 0.027379 12933 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.299 39.094 137.91 261.28 298.91 233.56 349.25 361 130 259 301 236 356 348 1 2 2 2 2 2 39910 1160 1400;1401 1141 2744;2745 3139;3140 3140 2 ALDLDPENDSYK Unmodified 1378.6252 0.62523989 2690 Q8VD33;E0CX61 Sgtb Small glutamine-rich tetratricopeptide repeat-containing protein beta yes no 0 0 0 0 6.5 3.77 2 1 1 63.204 63.204 2;3 1.4112E-05 22436 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.52 67.013 49.358 20.216 49.772 49.238 112.22 161.45 46 19 46 46 111 157 1 1 1 1 2 4 18097 1161 2690 1142 2746;2747;2748;2749 3141;3142;3143;3144;3145 3143 5 ALDLDPSK Unmodified 857.44945 0.44944778 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 56.215 56.215 2 0.00071334 18573 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.89 49.857 0 108.53 0 99.232 128.51 84.811 0 102 0 93 130 83 0 1 0 1 1 1 6857.1 1162 2472 1143 2750;2751;2752 3146;3147;3148 3147 3 ALDLDSSCK Unmodified 1007.4594 0.45936054 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 5.5 0.5 1 1 52.93 52.93 2 0.00079238 17352 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.05 78.859 137.67 115.99 207.47 125.75 211.48 161.33 130 121 204 130 213 157 2 2 2 2 2 2 13321 1163 2092 1144 2753;2754 3149;3150 3149 2 ALDLFSDNAPPPELLEIINEDIAK Unmodified 2636.3585 0.35851409 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 9.5 3.5 1 1 107.6 107.6 4 3.1378E-12 37948 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.994 57.673 7.4466 20.679 5.9285 9.4837 0 30.914 7 20 6 9 0 29 1 2 1 2 0 2 2841.4 1164 1933 1145 2755;2756 3151;3152 3151 2 ALDLGTFTGYSALALALALPEAGR Unmodified 2390.2846 0.28456129 2412 Q8BIG7;H3BJ37 Comtd1 Catechol O-methyltransferase domain-containing protein 1 yes no 0 0 0 0 11 0.707 1 2 1 110.02 110.02 3;4 1.1336E-16 34099 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.5 62.545 18.628 9.9908 0 4.2603 5.9397 22.491 18 10 0 4 6 22 2 2 0 1 1 3 5479 1165 2412 1146 2757;2758;2759;2760 3153;3154;3155;3156 3153 4 ALDLLDK Unmodified 786.44872 0.4487195 1769 P63085;A0A338P736 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 68.732 68.732 2 0.024299 24277 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.99 31.721 296.25 429.94 200.25 426.28 411.06 435.45 278 426 204 408 426 417 3 4 2 4 4 3 125850 1166 1769 1147 2761;2762;2763;2764 3157;3158;3159;3160 3157 4 ALDLLYGMVSK Unmodified 1208.6475 0.64749566 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 11.5 0.5 1 1 88.49 88.49 3 0.00068719 28146 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.488 53.052 0 0 19.701 56.236 18.99 0 0 0 19 56 19 0 0 0 1 2 1 0 13423 1167 1220 1148 2765;2766 3161;3162 3161 2 ALDLTMR Unmodified 818.43202 0.43202358 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 13 0 1 55.589 55.589 2 0.026934 19056 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.123 35.067 0 163.52 274.76 0 299.64 260.08 0 158 263 0 295 252 0 1 1 0 1 1 29181 1168 2919 1149 2767 3163 3163 1 ALDPAEQHLR Acetyl (Protein N-term) 1190.6044 0.60438529 2905 Q9CPZ8 Cmc1 COX assembly mitochondrial protein homolog yes yes 1 0 0 0 1 0 1 45.149 45.149 2 0.000126 13107 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.812 41.594 9.2477 38.135 36.471 27.58 45.209 47.746 9 37 37 28 46 46 1 1 1 1 1 1 11523 1169 2905 1150 2768 3164 3164 1 ALDPASPLGLALAAR Unmodified 1434.8195 0.81946344 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 9 0 1 78.519 78.519 2 0.00016435 26662 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.531 34.445 0 29.315 28.537 0 37.384 38.375 0 28 28 0 37 37 0 1 1 0 1 1 3865 1170 732 1151 2769 3165 3165 1 ALDQASEEIWNDFR Unmodified 1692.7744 0.77436375 1162 Q3TMN1;Q3UI33;O08663;M0QW69;M0QW48;M0QWM9 Metap2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 0 4 0 1 81.252 81.252 3 0.025168 30544 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.033 27.057 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1350.2 1171 1162 1152 2770 3166 3166 1 ALDVGSGSGILTACFAR Unmodified 1693.8458 0.84575455 808 F7D432;E9PWE0;E0CYV0;P23506;F6V9F1 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 8 0.816 1 1 1 74.132 74.132 3 5.0857E-18 25194 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.44 102.71 138.3 32.902 28.022 138.86 140.8 0 129 37 28 131 139 0 2 2 1 3 2 0 31570 1172 808 1153 2771;2772;2773 3167;3168;3169 3168 3 ALDVIVDLLEK Unmodified 1226.7122 0.71220441 1932 Q3TMH2;A2AWQ9 Scrn3 Secernin-3 yes no 0 0 0 0 8 0 1 103.32 103.32 3 0.014829 36223 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.288 24.409 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1527.3 1173 1932 1154 2774 3170 3170 1 ALEAELAALR Unmodified 1055.5975 0.597509 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 5.5 1.12 1 1 1 1 69.682 69.682 2 6.0487E-05 25336 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.3 54.624 256.53 294.88 165.5 198.92 318.35 96.322 241 296 167 195 315 93 3 4 2 3 3 1 133400 1174 1557 1155 2775;2776;2777;2778 3171;3172;3173;3174 3172 4 ALEAVFGK Unmodified 833.4647 0.46470391 385;3339 A0A2I3BRL8;Q91VM5;A0A2I3BQC0;Q9WV02;A2AFI3;A2AFI4 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 9 0 1 68.832 68.832 2 0.010743 22015 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.253 41.845 69.039 53.707 73.089 157.41 0 296.35 65 56 74 148 0 278 1 1 1 2 0 2 22671 1175 385;3339 1156 2779 3175;3176 3175 2 ALEDETK Unmodified 804.38651 0.38651317 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 4 0 1 41.375 41.375 2 0.065295 12194 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.485 17.935 98.678 79.666 119.18 120.79 173.63 143.22 93 83 120 120 176 139 1 1 1 1 1 1 7462 1176 1974 1157 2780 3177 3177 1 ALEEALEAKEEFER Unmodified 1662.8101 0.81008055 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 5 0 1 73.573 73.573 3 0.0055727 26960 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.377 33.799 39.701 0 0 19.872 47.6 18.896 37 0 0 19 47 19 1 0 0 1 1 1 6112.7 1177 1974 1158 2781 3178 3178 1 ALEEELR Unmodified 858.4447 0.44469675 3411 yes no 0 0 0 0 2.5 0.5 1 1 45.073 45.073 2 0.0072967 14316 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.39 0 233.52 351.47 338.42 387.09 313.25 67.79 221 350 346 378 317 65 1 1 2 3 2 1 107340 + 1178 3411 1159 2782;2783 3179;3180;3181 3181 3 ALEEERPSLR Unmodified 1198.6306 0.63060004 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 1 3.5 0.5 1 1 39.848 39.848 3 1.94E-05 12027 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.79 79.835 0 0 57.633 66.426 173.95 57.9 0 0 56 65 176 56 0 0 1 1 2 1 18243 1179 2741 1160 2784;2785 3182;3183 3182 2 ALEEETAR Unmodified 917.44543 0.44542503 1215 O35954;D3YXW5 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes no 0 0 0 0 1.5 0.5 1 1 34.77 34.77 2 0.012124 8836 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.657 44.231 108.41 73.042 111.82 75.267 148.42 85.309 102 74 111 74 148 84 2 1 2 1 2 2 28689 1180 1215 1161 2786;2787 3184;3185 3184 2 ALEELATK Unmodified 873.48075 0.48074791 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 8 3.56 1 1 1 58.479 58.479 2 0.018629 19399 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.059 23.044 156.91 172.02 278.86 24.331 463.12 35.927 148 176 269 28 445 37 2 3 3 1 3 1 23073 1181 2963 1162 2788;2789;2790 3186;3187;3188 3187 3 ALEENNNFSK Unmodified 1164.5411 0.54111633 1629 P55821 Stmn2 Stathmin-2 yes yes 0 0 0 0 6 2.93 2 3 1 1 48.503 48.503 2;3 1.4673E-08 14985 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.9 0 354.56 215.43 398.81 389.86 543.49 104.58 333 222 398 379 538 102 5 4 6 4 5 1 63962 1182 1629 1163 2791;2792;2793;2794;2795;2796;2797 3189;3190;3191;3192;3193;3194;3195 3195 7 ALEEPLLLPR Unmodified 1149.6758 0.67575932 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9;F6YP92 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 6 0 1 70.013 70.013 2 0.036857 24805 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.235 25.05 69.745 0 0 39.019 75.612 0 65 0 0 37 74 0 1 0 0 1 1 0 2364.6 1183 1127 1164 2798 3196 3196 1 ALEESNYELEGK Unmodified 1380.6409 0.64088996 659 CON__P13645;CON__P02535-1;A2A513;P02535 Krt10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 4 1 1 1 56.722 56.722 2;3 8.4996E-13 19787 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.28 94.416 96.283 24.349 27.585 25.059 33.091 107.79 90 25 28 25 34 102 2 1 1 1 1 2 13058 + 1184 659 1165 2799;2800 3197;3198 3197 2 ALEHFPMLQK Unmodified 1212.6325 0.6325143 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9 0 1 62.118 62.118 3 0.00055498 18824 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.213 61.492 0 67.791 81.915 85.837 0 118.33 0 65 83 83 0 111 0 1 1 1 0 1 10855 1185 2179 1166 2801 3199 3199 1 ALEHFTDLYDIK Unmodified 1463.7296 0.72964538 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.5 0.5 1 1 70.758 70.758 3 8.8853E-14 24216 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.17 89.931 114 94.591 55.62 45.609 132.6 159.31 107 97 56 46 134 153 2 2 1 1 2 2 40660 1186 2185 1167 2802;2803 3200;3201 3201 2 ALEHFTDLYDIKR Unmodified 1619.8308 0.83075641 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 8 0 1 63.667 63.667 4 0.028946 20265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.016 18.063 0 48.944 0 0 86.818 0 0 46 0 0 83 0 0 1 0 0 1 0 4492.5 1187 2185 1168 2804 3202 3202 1 ALEIFAYALQYFK Unmodified 1575.8337 0.83371653 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 13 0 1 112.89 112.89 3 3.2191E-05 44635 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.5 75.459 14.941 16.017 0 0 0 0 14 16 0 0 0 0 1 1 0 0 0 0 2195.1 1188 2585 1169 2805 3203 3203 1 ALEIQPGFIR Unmodified 1142.6448 0.64479354 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 10 3 1 1 66.985 66.985 2 5.3253E-05 22657 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.11 67.026 68.816 150.42 144.04 150.96 117.74 252.48 65 148 148 148 120 240 1 2 2 2 1 2 12686 1189 721 1170 2806;2807 3204;3205 3204 2 ALELDPDNDTYK Unmodified 1392.6409 0.64088996 317 Q8BJU0;A0A1W2P6P1 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 4 1 1 1 62.526 62.526 2;3 0.006379 22417 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.207 27.467 20.085 0 50.753 0 0 9.594 19 0 47 0 0 9 1 0 1 0 0 1 1511.7 1190 317 1171 2808;2809 3206;3207 3206 2 ALELDPNLYR Unmodified 1202.6295 0.62953741 1974;391 A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q3UH59;Q61879;Q5SV64 Myh11;Myh10 Myosin-11;Myosin-10 no no 0 0 0 0 5.5 0.5 1 1 67.114 67.114 2;3 0.011284 23943 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.654 33.281 20.244 47.993 38.86 30.079 27.906 0 19 47 37 28 28 0 1 2 1 1 1 0 6869.3 1191 391;1974 1172 2810;2811 3208;3209 3208 2 ALELDSNNEK Unmodified 1131.5408 0.54078198 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 7.33 4.03 1 1 1 51.103 51.103 2 0.00091734 16502 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.338 25.788 29.952 18.196 0 30.256 18.484 28 28 19 0 28 19 28 1 1 0 1 1 1 4026.1 1192 1491 1173 2812;2813;2814 3210;3211;3212 3212 3 ALELEQER Unmodified 986.50327 0.50327426 1453;1452 P26043;P26041 Rdx;Msn Radixin;Moesin no no 0 0 0 0 4 0 1 46.543 46.543 2 0.037463 14676 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.735 7.7618 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 16598 1193 1453;1452 1174 2815 3213 3213 1 ALELTGLK Unmodified 843.50657 0.50656873 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 13 0 2 65.026 65.026 2;3 0.01367 23561 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.57 42.088 0 0 58.978 36.229 37.038 0 0 0 56 37 37 0 0 0 1 1 1 0 3005 1194 1333 1175 2816;2817 3214;3215 3215 2 ALENDPDCR Unmodified 1088.4557 0.45567214 269;2119 A0A1C7CYV0;B1AX58;Q99K51;Q61233 Pls3;Lcp1 Plastin-3;Plastin-2 no no 0 0 0 0 2 0 1 34.285 34.285 2 0.00069863 9123 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 118.71 87.993 0 116.11 119.26 81.217 127.29 144.54 0 111 120 83 130 139 0 1 1 1 1 1 17845 1195 269;2119 1176 2818 3216 3216 1 ALEQFLQEYFDGNLK Unmodified 1813.8887 0.88866522 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 99.69 99.69 3 1.1228E-05 40273 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.102 57.788 42.259 82.095 51.172 44.681 76.373 44.263 40 81 51 44 75 44 3 5 2 3 2 3 15081 1196 1470 1177 2819;2820;2821;2822 3217;3218;3219;3220;3221;3222 3222 6 ALEQFLQEYFDGNLKR Unmodified 1969.9898 0.98977625 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 1 9 0 1 89.733 89.733 4 0.0031666 31617 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.014 24.075 0 0 0 29.902 37.328 0 0 0 0 28 37 0 0 0 0 1 1 0 2339.5 1197 1470 1178 2823 3223 3223 1 ALEQQVEEMR Unmodified 1231.5867 0.58668632 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3 0 2 52.332 52.332 2;3 0.0020256 17754 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.056 23.312 39.419 20.073 55.993 47.449 28.62 49.285 37 19 55 46 28 47 1 1 2 1 1 2 6499.8 1198 1974 1179 2824;2825 3224;3225 3225 2 ALESALK Unmodified 730.4225 0.42250475 1481;2139 P28738;Q61768 Kif5c;Kif5b Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain no no 0 0 0 0 7 0 1 52.501 52.501 2 0.034977 15749 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.305 28.954 117.4 116.64 186.75 130.96 0 138.58 111 120 185 130 0 130 1 1 1 1 0 1 14286 1199 1481;2139 1180 2826 3226 3226 1 ALESPERPFLAILGGAK Unmodified 1767.9883 0.98831969 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 10 1.69 2 1 1 2 1 77.272 77.272 3;4 4.0479E-19 26976 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.14 99.962 750.31 394.64 1129.9 1167.5 1118.5 876.82 704 408 1099 1149 1130 837 6 5 6 10 7 5 415660 1200 1334 1181 2827;2828;2829;2830;2831;2832;2833 3227;3228;3229;3230;3231;3232;3233;3234;3235;3236 3228 10 ALESSEELLETANQTLQASDSEDFSQAAK Unmodified 3111.4368 0.436777 2289 Q7TPM6 Fsd1 Fibronectin type III and SPRY domain-containing protein 1 yes yes 0 0 0 0 4 0 1 88.778 88.778 4 1.524E-10 33510 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.415 36.007 14.843 18.982 13.934 0 19.38 14.371 14 19 14 0 19 14 1 1 1 0 1 1 3327 1201 2289 1182 2834 3237 3237 1 ALETMNK Unmodified 805.40039 0.4003891 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 7 0 1 47.058 47.058 2 0.05541 13160 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.109 22.426 99.789 0 0 61.208 0 69.29 93 0 0 56 0 65 1 0 0 1 0 1 2241 1202 521 1183 2835 3238 3238 1 ALEVAEYLTPVLK Unmodified 1444.8177 0.81773211 2902 Q9CPX6 Atg3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 0 8 0.816 1 1 1 87.948 87.948 3 0.00044746 31789 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.456 43.47 0 38.61 45.359 56.377 54.988 29.053 0 37 46 55 56 28 0 1 1 2 2 1 4304.1 1203 2902 1184 2836;2837;2838 3239;3240;3241 3240 3 ALEVFPEFAAAHSNLASVLQQQGK Unmodified 2554.318 0.31798668 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 8.5 0.5 1 1 83.757 83.757 4 0.0042076 29776 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.405 20.096 20.346 8.2041 0 0 28.291 29.041 19 9 0 0 28 28 1 1 0 0 1 1 8221.8 1204 2543 1185 2839;2840 3242;3243;3244 3242 3 ALEVLVAK Unmodified 841.5273 0.52730417 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 10 2.16 1 1 1 67.292 67.292 2 0.0011914 22106 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.11 50.027 475.02 291.01 348.16 0 547.49 474.74 446 300 334 0 539 460 3 2 2 0 3 3 45863 1205 3214 1186 2841;2842;2843 3245;3246;3247 3245 3 ALEYIEK Unmodified 864.45928 0.45928418 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 6.33 0.471 2 1 59.612 59.612 2;3 0.011382 19941 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.415 31.292 119.16 169.2 27.169 192.2 503.86 178.4 112 167 28 186 496 176 2 2 1 3 3 1 13858 1206 1882 1187 2844;2845;2846 3248;3249;3250 3248 3 ALFAVPK Unmodified 744.45341 0.45341094 2926 Q9CQF3;A0A1D5RM23;A0A1D5RLT7 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 0 11.5 0.5 1 1 64.08 64.08 2 0.020324 15666 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.75 43.096 0 158 95.67 111.25 0 0 0 158 93 107 0 0 0 1 1 1 0 0 34283 1207 2926 1188 2847;2848 3251;3252 3252 2 ALFCVLQK Unmodified 977.53682 0.536823 724 D3YYP5;E9Q5V3;Q9Z2D3 Dfna5 Non-syndromic hearing impairment protein 5 homolog yes no 0 0 0 0 6.5 5.5 1 1 72.936 72.936 2 1.5712E-26 18768 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 159.14 104.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1208 724 1189 2849;2850 3253;3254 3254 2 ALFDFLK Unmodified 852.47454 0.47454032 1140;200;646;403 A2A542;A2A545;A2A543;A0A0R4J194;Q8R3Z5;A0A0A6YWX5;A0A2U3TZ49;D3Z3Z3;P54285;C7IVS7;Q8CC27;J3QK20;Q8R0S4 Cacnb1;Cacnb2;Cacnb3;Cacnb4 Voltage-dependent L-type calcium channel subunit beta-1;Voltage-dependent L-type calcium channel subunit beta-3;Voltage-dependent L-type calcium channel subunit beta-2;Voltage-dependent L-type calcium channel subunit beta-4 no no 0 0 0 0 11 0.816 1 1 1 84.636 84.636 2 0.027111 23546 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.041 20.012 229.33 0 228.94 208.23 38.702 0 215 0 221 203 37 0 2 0 1 1 1 0 42501 1209 200;403;646;1140 1190 2851;2852;2853 3255;3256;3257 3257 3 ALFDFNGNDEEDLPFK Unmodified 1869.8421 0.84210896 2166 Q64010;Q5ND50;F7D232 Crk Adapter molecule crk no no 0 0 0 0 7 0 1 87.407 87.407 3 0.018656 32154 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.511 20.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1210 2166 1191 2854 3258 3258 1 ALFDSYTNLER Unmodified 1327.6408 0.64083038 18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WR90 Abi2 Abl interactor 2 yes no 0 0 0 0 10 3 1 1 67.772 67.772 2 2.8741E-33 22880 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 192.12 150.69 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 7526.9 1211 18 1192 2855;2856 3259;3260 3259 2 ALFDYDK Unmodified 870.41233 0.41233399 407;767 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8 Dlg4;Dlg1 Disks large homolog 4;Disks large homolog 1 no no 0 0 0 0 7 0 1 62.753 62.753 2 0.02695 20540 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.298 29.658 304.52 270.52 347.04 287.62 344.55 456.01 287 279 349 288 357 437 1 1 1 1 1 1 19782 1212 407;767 1193 2857 3261 3261 1 ALFHAAK Unmodified 756.42826 0.42825883 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 11 1.41 1 1 1 1 1 43.205 43.205 2;3 0.0040627 9072 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.29 72.208 976.81 670.65 1131.3 817 1070.7 1268.9 918 696 1117 805 1096 1219 3 3 5 3 4 5 159590 1213 775 1194 2858;2859;2860;2861;2862 3262;3263;3264;3265;3266;3267 3263 6 ALFLHNR Unmodified 869.48717 0.48717069 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 0 11 0 1 41.781 41.781 3 0.027157 8267 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.641 18.955 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 11674 1214 1547 1195 2863 3268 3268 1 ALFLIPR Unmodified 828.52216 0.52215921 1081;615 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;F8VPL5;E9PVG7;A0A0A6YW53;A0A0A6YWM8;A0A0A6YWR8;B2RUE8;B7ZNR9;P97820;A0A0A6YVZ8;E0CZF8;E0CZD7;E0CXD6;E0CY98;E9PUL9;B9EKN8;B2RQ80;P83510 Mink1;Map4k4;Tnik Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4;Traf2 and NCK-interacting protein kinase no no 0 0 0 0 12 0 1 71.429 71.429 2 0.027272 18348 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.785 21.21 286 225.46 252.92 228.52 239.94 291.63 269 234 257 227 249 280 1 1 1 1 1 1 36010 1215 1081;615 1196 2864 3269 3269 1 ALFLMTK Unmodified 822.46735 0.46734645 969 E9QNE9;Q99JP0 Map4k3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 yes no 0 0 0 0 1 0 1 72.873 72.873 2 0.027669 24779 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.071 34.357 79.402 0 0 49.624 34.772 48.044 74 0 0 46 37 46 1 0 0 1 1 1 2947.1 1216 969 1197 2865 3270 3270 1 ALFPLGLGHAAEYVRPR Unmodified 1866.0264 0.026436528 2647 Q8R1S0;D3YW66 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial yes no 0 0 0 1 12 0 1 65.044 65.044 4 0.00020095 15859 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.649 47.97 0 39.64 47.394 0 46.111 58.38 0 38 46 0 46 56 0 1 1 0 1 1 11132 1217 2647 1198 2866 3271 3271 1 ALFVSAFPQQLTMK Unmodified 1579.8432 0.84323535 504 D3Z781;E9QAU4;A2AQ25;Q8BHR1 Etl4;Skt Sickle tail protein yes no 0 0 0 0 1 0 1 84.436 84.436 3 7.9778E-05 29757 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.891 49.423 48.632 55.045 75.357 26.113 0 78.884 46 56 74 28 0 74 1 1 1 1 0 1 2683.4 1218 504 1199 2867 3272 3272 1 ALGAALTPFNPLAGLR Unmodified 1580.9039 0.90386178 3129 Q9DBL9 Abhd5 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 yes yes 0 0 0 0 12 0 1 87.367 87.367 2 0.00024023 24681 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.721 51.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1003.2 1219 3129 1200 2868 3273 3273 1 ALGAHLTSICTPEEQDFVNDR Unmodified 2372.1067 0.10667328 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 6 0 1 62.512 62.512 3 5.6431E-06 21319 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.496 49.503 20.292 18.848 0 20.234 28.359 0 19 19 0 19 28 0 1 1 0 1 1 0 4611.3 1220 2125 1201 2869 3274 3274 1 ALGAIVYITEIDPICALQACMDGFR Unmodified 2796.3649 0.36487857 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 9 0 1 112.84 112.84 4 0.0012499 37996 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.883 32.93 0 0 12.984 0 0 3.198 0 0 12 0 0 3 0 0 1 0 0 1 1554.8 1221 2298 1202 2870 3275 3275 1 ALGDFDYK Unmodified 927.4338 0.43379771 1588 P49443;Q9EQE2 Ppm1a Protein phosphatase 1A yes no 0 0 0 0 7 0 1 62.122 62.122 2 0.031863 20203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.223 38.102 0 0 37.932 47.197 43.611 68.046 0 0 37 46 46 65 0 0 1 1 1 1 5039.7 1222 1588 1203 2871 3276 3276 1 ALGFPLERPK Unmodified 1126.6499 0.64987892 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 1 10.2 1.34 2 3 1 57.615 57.615 2;3;4 0.00084883 15051 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.095 57.229 2069.2 1676.3 2142.3 1549.6 1917.2 2013.4 1948 1734 2143 1555 1967 1939 5 4 5 4 7 6 473020 1223 3011 1204 2872;2873;2874;2875;2876;2877 3277;3278;3279;3280;3281;3282;3283 3282 7 ALGFQFHSR Unmodified 1061.5407 0.54066282 1211 O35857 Timm44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 0 10.5 0.5 1 1 48.761 48.761 3 0.00022678 11231 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.4 64.367 48.744 83.302 103.05 46.383 0 108.73 46 83 102 46 0 102 1 2 2 1 0 2 10686 1224 1211 1205 2878;2879 3284;3285 3284 2 ALGGASGGYTTGPEPLVSLLR Unmodified 2015.0688 0.068754852 389 A0A2R8VHE4;E9PWY6;O88986 Gcat 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes no 0 0 0 0 8 0 1 81.448 81.448 3 0.056702 28699 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 24.875 12.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1225 389 1206 2880 3286 3286 1 ALGGELAAIPSSPQPTPK Unmodified 1732.9359 0.93594977 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 8 0 1 66.196 66.196 3 0.0032619 21453 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.382 24.465 69.168 63.777 42.984 58.646 0 0 65 65 46 56 0 0 1 1 1 1 0 0 17175 1226 3285 1207 2881 3287 3287 1 ALGHQLGR Unmodified 850.47733 0.47733428 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 3 1 1 31.744 31.744 3 0.0021844 6210 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.662 37.381 59.371 160.62 208.48 51.867 45.733 59.696 56 158 204 56 46 56 1 2 2 1 1 1 9161.7 1227 3204 1208 2882;2883 3288;3289 3288 2 ALGITLIK Unmodified 827.54804 0.54803961 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 8 4.97 1 1 1 70.706 70.706 2 0.00037184 17938 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 154.31 48.266 147.95 304.74 331.6 192.96 64.019 127.16 139 301 332 191 65 121 1 4 4 3 1 2 170110 1228 1994 1209 2884;2885;2886 3290;3291;3292;3293;3294 3293 5 ALGLAEEDEED Unmodified 1189.4986 0.4986424 768 D3Z3F4;F7C846;P47802;D3YVW0;G3UYJ5 Mtx1 Metaxin-1 yes no 0 0 0 0 2 1 1 1 61.438 61.438 2 0.0010241 20294 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.854 69.751 88.786 34.161 16.979 0 19.874 29.848 83 38 18 0 19 28 2 2 2 0 1 1 8854.3 1229 768 1210 2887;2888 3295;3296;3297 3295 3 ALGLAPGVLATR Unmodified 1137.687 0.68699271 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 10 0 1 65.229 65.229 2 0.00029996 18262 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.85 42.042 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1230 2725 1211 2889 3298 3298 1 ALGLEESPEEEGK Unmodified 1386.6515 0.65145464 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3.5 0.957 1 2 2 1 55.478 55.478 2;3;4 4.8734E-23 18850 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 164.64 135.68 167.68 190.79 281.28 160.11 179.55 157.77 158 195 270 158 176 148 4 5 4 3 3 2 55623 1231 510 1212 2890;2891;2892;2893;2894;2895 3299;3300;3301;3302;3303;3304 3303 6 ALGLEPAAVAR Unmodified 1066.6135 0.61349341 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 7 0 1 55.676 55.676 2 0.018217 17149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.267 3.8015 48.898 0 77.363 55.189 74.869 0 46 0 74 56 74 0 1 0 1 1 1 0 3885.1 1232 2725 1213 2896 3305 3305 1 ALGLSNFNSR Unmodified 1077.5567 0.55670682 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 9.5 0.5 1 1 55.065 55.065 2 0.00057942 15579 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.642 54.067 371.85 312.25 537.04 330.69 416.39 408.12 351 316 529 339 426 394 2 1 2 2 2 2 44750 1233 3214 1214 2897;2898 3306;3307 3306 2 ALGNICYDSHSLQAQLISMGVIPTLVK Unmodified 2927.5249 0.52488469 919 E9Q6Q4;A0A0G2JGC8 Rap1gds1 yes no 0 0 0 0 10 0 1 93.281 93.281 4 0.0010054 30347 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.373 26.316 0 20.216 0 0 28.987 8.7668 0 19 0 0 28 9 0 1 0 0 1 1 3499.7 1234 919 1215 2899 3308 3308 1 ALGQNPTNAEVLK Unmodified 1353.7252 0.72522871 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5;Q8CI43 Myl6;Myl6b Myosin light polypeptide 6;Myosin light chain 6B yes no 0 0 0 0 7 0.816 1 1 1 55.479 55.479 3 1.839E-05 16400 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.73 82.625 97.695 158.59 112.09 215.85 235.26 128.21 92 157 112 204 232 121 2 3 2 2 2 2 38246 1235 316 1216 2900;2901;2902 3309;3310;3311 3311 3 ALGSEGEAAATEVDLER Unmodified 1716.8166 0.81662249 1225 O54988 Slk STE20-like serine/threonine-protein kinase yes yes 0 0 0 0 1.5 0.5 1 1 58.248 58.248 3 1.4514E-06 19895 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.72 88.031 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 7392 1236 1225 1217 2903;2904 3312;3313 3313 2 ALGVALLACFCSDPELASHPQVLNK Unmodified 2709.3618 0.36184211 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10.4 0.8 1 1 3 84.767 84.767 3;4;5 5.6937E-12 26537 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.88 59.032 0 59.137 55.024 28.771 65.679 28.81 0 56 56 28 65 28 0 1 3 1 2 1 29654 1237 3355 1218 2905;2906;2907;2908;2909 3314;3315;3316;3317;3318 3316 5 ALGVLAQLIWSR Unmodified 1325.782 0.78195573 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 13 0 1 97.957 97.957 2 0.0077238 39409 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.63 20.273 99.251 0 90.498 94.681 83.717 115.94 93 0 88 93 88 111 1 0 1 1 1 1 12037 1238 3011 1219 2910 3319 3319 1 ALGYFAVVTGK Unmodified 1124.623 0.62299547 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 9.25 4.82 1 1 1 1 76.393 76.393 3 6.3352E-05 20409 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.573 43.647 49.189 204.08 231.79 117.87 307.7 154.83 46 195 223 111 306 148 1 3 3 2 3 2 71118 1239 1653 1220 2911;2912;2913;2914 3320;3321;3322;3323;3324 3322 5 ALGYNYK Unmodified 827.41775 0.41775372 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 9 0 1 50.135 50.135 2 0.013137 13206 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.35 81.248 39.543 31.382 0 45.906 0 54.366 37 32 0 42 0 51 1 1 0 1 0 1 4027.7 1240 1198 1221 2915 3325 3325 1 ALGYSYLESLLGK Unmodified 1412.7551 0.75513185 747 F6SXD2;D3Z0Y8;Q9CQX0 Otub2 Ubiquitin thioesterase OTUB2 yes no 0 0 0 0 11 0 1 90.9 90.9 3 0.0070932 29204 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.115 25.917 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1990.3 1241 747 1222 2916 3326 3326 1 ALHFVFK Unmodified 860.49086 0.49085908 2899 Q9CPV4;E9Q197;E9Q055;E9Q2R6 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 9.25 4.82 1 1 1 1 60.92 60.92 3 0.0053222 14495 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.26 66.924 419.94 230.39 593.07 204.5 127.6 253.26 395 232 568 204 130 241 2 3 3 3 2 3 88583 1242 2899 1223 2917;2918;2919;2920 3327;3328;3329;3330 3329 4 ALHGAQTSDEER Unmodified 1312.6008 0.60075648 3095 Q9D8T7;F8WHU8 Slirp SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 0 6.25 3.96 1 1 1 1 25.393 25.393 3 1.4736E-13 5329 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129 110.26 35.352 0 24.419 48.047 45.462 38.413 33 0 23 47 46 37 2 0 2 3 3 2 10952 1243 3095 1224 2921;2922;2923;2924 3331;3332;3333;3334 3331 4 ALHIPESLPR Unmodified 1131.64 0.64004252 1075 G3X8T3;P16675 Ctsa Carboxypeptidase;Lysosomal protective protein;Lysosomal protective protein 32 kDa chain;Lysosomal protective protein 20 kDa chain yes no 0 0 0 0 7 0 1 53.242 53.242 3 0.0056469 16031 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.246 24.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1244 1075 1225 2925 3335 3335 1 ALHLVGLK Unmodified 849.54362 0.54362294 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 8 4.97 1 1 1 57.624 57.624 2;3 0.0034759 13058 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.597 16.755 107.95 168.03 142.13 71.045 0 256.91 102 167 139 65 0 241 1 2 1 2 0 3 23730 1245 1412 1226 2926;2927;2928 3336;3337;3338 3338 3 ALHSLLLR Unmodified 921.57599 0.5759857 2118 Q61205;D3Z7E6 Pafah1b3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 0 11 0 1 51.134 51.134 3 0.0028868 12074 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.916 43.688 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 13186 1246 2118 1227 2929 3339 3339 1 ALHTATEK Unmodified 869.46068 0.46068117 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 6 0 1 32.779 32.779 3 0.046105 7284 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.349 20.377 39.564 27.124 0 0 36.688 58.649 37 28 0 0 37 56 1 1 0 0 1 1 2429.7 1247 761 1228 2930 3340 3340 1 ALHTTASLR Unmodified 968.54033 0.54032847 1222 Q80VX2;O54901;E9QMY1;E9PZI9;Q05D16 Cd200 OX-2 membrane glycoprotein yes no 0 0 0 0 8 0 1 33.003 33.003 3 0.0031389 6187 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.625 47.325 78.789 32.798 75.223 55.671 56.019 0 74 37 74 56 56 0 1 1 1 1 1 0 3638.2 1248 1222 1229 2931 3341 3341 1 ALIAAQYSGAQVR Unmodified 1346.7306 0.73064844 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 10.8 1.34 1 2 1 1 1 54.065 54.065 2;3 1.084E-57 13367 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 169.82 111.23 256.41 364.8 57.026 111.49 390.22 594.35 241 360 56 102 389 568 2 2 1 1 2 3 79675 1249 3094 1230 2932;2933;2934;2935;2936;2937 3342;3343;3344;3345;3346;3347 3344 6 ALIADSGLK Unmodified 886.51238 0.51238239 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 59.057 59.057 2 1.5505E-05 18098 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 149.65 60.711 482.97 191.77 616.57 492.42 689.05 445.37 454 197 603 496 695 434 2 1 3 3 3 2 59434 1250 3397 1231 2938;2939 3348;3349;3350 3349 3 ALIAEATK Unmodified 815.47527 0.4752686 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7.5 0.5 1 1 53.519 53.519 2 0.0037439 15426 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.62 60.658 235.52 246.05 243.37 250.93 415.54 265.3 222 250 250 250 417 260 2 2 2 2 2 2 23124 1251 1412 1232 2940;2941 3351;3352 3352 2 ALIAGGGAPEIELALR Unmodified 1549.8828 0.88279198 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 8.75 2.49 2 1 1 77.538 77.538 2;3 0.00013608 27490 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.289 28.906 69.516 45.321 0 90.766 55.623 37.667 65 47 0 84 56 38 2 2 0 2 1 2 30167 1252 1824 1233 2942;2943;2944;2945 3353;3354;3355;3356 3353 4 ALIASAGADALAK Unmodified 1170.6608 0.66083754 1655 P58404;V9GXE7 Strn4 Striatin-4 yes no 0 0 0 0 8.5 0.5 1 1 64.631 64.631 2;3 6.6936E-07 20076 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.86 66.719 48.625 84.05 122.47 46.675 121.77 46.873 46 84 120 46 120 46 1 2 2 1 2 1 7514.9 1253 1655 1234 2946;2947 3357;3358 3358 2 ALIESYQNLTR Unmodified 1306.6881 0.68811492 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 0 0 0 0 9 0.816 1 1 1 63.004 63.004 2 1.7364E-13 19249 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.04 98.547 79.23 0 28.841 88.048 108.73 97.103 74 0 28 84 111 93 2 0 1 2 2 1 22395 1254 634 1235 2948;2949;2950 3359;3360;3361 3360 3 ALIGMTAGATGAFVGTPAEVALIR Unmodified 2286.2406 0.24058798 2957 Q9CR62;Q5SX46 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 10 0 1 88.942 88.942 3 0.00015642 28831 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.254 27.855 9.477 0 30.248 0 19.874 0 9 0 28 0 19 0 1 0 1 0 1 0 4095.4 1255 2957 1236 2951 3362 3362 1 ALINADELANDVAGAEALLDR Deamidation (N) 2154.0804 0.080441751 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 3.57 0.495 3 4 95.691 95.691 3 3.5339E-22 34706 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.73 101.69 2.1146 5.2545 12.396 5.888 9.0964 36.396 2 5 12 6 9 36 1 2 4 3 3 4 15381 1256 551 1237 2952;2953;2954;2955;2956;2957;2958 3363;3364;3365;3366;3367;3368;3369;3370 3369 144;145 8 ALINADELANDVAGAEALLDR Unmodified 2153.0964 0.096426166 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 3.27 1 1 2 1 1 98.161 98.161 2;3 2.7025E-76 35787 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 182.64 158.6 84.347 50.92 35.771 79.893 84.388 24.796 79 53 35 76 85 24 5 3 5 4 5 2 77657 1257 551 1237 2959;2960;2961;2962;2963;2964 3371;3372;3373;3374;3375;3376;3377;3378 3375 8 ALINPANVTFK Unmodified 1186.671 0.67100829 1146 J3QP56;P97823;D3Z111 Lypla1 Acyl-protein thioesterase 1 yes no 0 0 0 0 11.5 1.12 1 1 1 1 69.943 69.943 2;3 1.4399E-10 20003 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 141.95 88.784 98.791 73.48 213.3 56.696 100.12 225.27 93 74 204 56 102 214 2 1 4 1 2 4 26111 1258 1146 1238 2965;2966;2967;2968 3379;3380;3381;3382 3380 4 ALIPCKR Unmodified 856.49529 0.49529253 2870 Q99M71 Epdr1 Mammalian ependymin-related protein 1 yes yes 0 0 0 1 11 0 1 43.087 43.087 3 0.02317 8962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.748 20.467 328.18 243.87 0 0 0 0 307 250 0 0 0 0 1 1 0 0 0 0 22804 1259 2870 1239 2969 3383 3383 1 ALIPLQTEAHPETK Unmodified 1546.8355 0.83550744 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 6.5 0.5 1 1 55.569 55.569 3 0.0021334 17055 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.008 31.055 148.25 86.602 77.11 70.041 53.361 137.06 139 92 74 65 56 130 2 2 1 1 1 2 9312.3 1260 82 1240 2970;2971 3384;3385 3385 2 ALIQCAK Unmodified 802.43711 0.43710895 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 9.5 0.5 1 1 48.115 48.115 2 0.026931 12277 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.734 23.958 102.99 109.64 91.189 52.527 148.48 114.09 97 111 93 51 148 111 2 2 2 1 2 2 8118.6 1261 2182 1241 2972;2973 3386;3387 3386 2 ALKHELAFK Unmodified 1055.6128 0.61276513 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 1 10 0 1 51.996 51.996 4 0.004428 12393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.954 51.968 69.021 42.863 85.35 34.479 46.532 0 65 46 83 37 46 0 1 1 1 1 1 0 6109.9 1262 3056 1242 2974 3388 3388 1 ALKIPAMTIAK Unmodified 1155.705 0.70495096 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 1 0 1 66.862 66.862 3 0.00045652 22493 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.937 64.981 68.926 63.107 84.094 35.429 0 49.036 65 65 83 37 0 46 1 1 1 1 0 1 5776.8 1263 1766 1243 2975 3389 3389 1 ALLAEHLLKPLPADR Acetyl (Protein N-term) 1697.9828 0.98284038 753 Q9JL62;D3Z1H9;D3Z1H8 Gltp Glycolipid transfer protein yes no 1 0 0 1 7.5 0.5 1 1 76.136 76.136 3 1.834E-05 26848 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.009 33.798 88.775 69.16 47.703 36.4 63.671 136.76 83 65 46 37 65 130 1 1 1 1 1 2 16644 1264 753 1244 2976;2977 3390;3391 3390 2 ALLALCGGED Unmodified 1017.4801 0.48009598 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 8.5 2.69 1 1 1 1 75.38 75.38 2 0.0064123 26404 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.823 56.276 39.397 123.88 131.79 27.85 67.322 58.879 37 121 130 28 65 56 1 3 3 1 2 2 18640 1265 1050;1380 1245 2978;2979;2980;2981 3392;3393;3394;3395 3393 4 ALLAQHYR Unmodified 970.53485 0.53484916 1938 Q3TW96 Uap1l1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes yes 0 0 0 0 10 0 1 39.043 39.043 3 0.0021418 7392 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.541 61.155 48.618 94.941 43.831 0 133.07 84.681 46 93 46 0 130 83 1 1 1 0 1 1 4743.5 1266 1938 1246 2982 3396 3396 1 ALLATASQCQQPAGNK Unmodified 1656.8254 0.82535346 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 0 0 0 0 10.4 1.5 2 1 1 1 51.538 51.538 2;3;4 5.1398E-38 12274 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 154.47 127.06 387.55 141.41 233.45 398.13 224.22 535.44 362 139 227 369 222 507 4 2 4 3 3 3 83803 1267 1536 1247 2983;2984;2985;2986;2987 3397;3398;3399;3400;3401;3402 3399 6 ALLDTLQLGPDALTVHLIHEVTK Unmodified 2496.3952 0.39517437 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 9 0 1 92.674 92.674 4 0.020558 32956 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 31.473 17.882 0 29.792 0 0 29.288 0 0 28 0 0 28 0 0 1 0 0 1 0 1681.9 1268 2408 1248 2988 3403 3403 1 ALLEDGTFR Unmodified 1020.524 0.52400971 673 Q8K2T1;D3YU12;G5E8S7 Nmral1 NmrA-like family domain-containing protein 1 yes no 0 0 0 0 5 0 1 59.213 59.213 2 0.0070926 20292 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.059 45.416 59.471 34.107 74.818 65.186 74.41 0 56 37 74 65 74 0 1 1 1 1 1 0 3867.9 1269 673 1249 2989 3404 3404 1 ALLEEIER Unmodified 971.52876 0.52876073 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 63.502 63.502 2 0.031661 22474 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.342 21.753 0 0 0 0 0 38 0 0 0 0 0 38 0 0 0 0 0 1 3564.2 1270 3266 1250 2990 3405 3405 1 ALLEGCGLLGLPLGR Unmodified 1537.865 0.86503343 1918 Q3TES0;A0A0N4SWH8 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes no 0 0 0 0 10 0 1 87.575 87.575 2 0.0037693 28205 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.401 11.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1271 1918 1251 2991 3406 3406 1 ALLEGYNK Unmodified 906.48108 0.48108226 3367 Q9Z0Y1 Dctn3 Dynactin subunit 3 yes yes 0 0 0 0 9 0 1 56.587 56.587 2 0.016077 16288 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.452 36.735 38.43 123.26 109.2 74.374 0 0 37 120 111 74 0 0 1 1 1 1 0 0 4417.4 1272 3367 1252 2992 3407 3407 1 ALLELQLEPEELYQTFQR Unmodified 2219.1474 0.1473991 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 9.75 3.27 1 1 2 94.288 94.288 3;4 4.4997E-07 37705 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.505 66.847 19 15.629 19.809 42.696 13.953 0 19 15 19 42 14 0 1 2 1 3 1 0 23354 1273 1652 1253 2993;2994;2995;2996 3408;3409;3410;3411;3412 3412 5 ALLEVLGR Unmodified 869.53345 0.53345218 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8;D3YWI0 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 70.976 70.976 2 0.020548 21119 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.923 38.38 69.122 73.365 42.468 128.37 72.132 116.27 65 74 46 121 74 111 1 1 1 2 1 2 57482 1274 158 1254 2997;2998 3413;3414 3414 2 ALLEVVQSGGK Unmodified 1099.6237 0.62372375 3399 Q9Z2U0;A0A338P7D7;Q9CWH6 Psma7;Psma8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 67.289 67.289 2;3 1.0187E-07 21356 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.47 70.226 245.78 56.275 302.91 254.58 257.67 317.78 231 56 287 250 259 305 4 1 3 4 3 4 43251 1275 3399 1255 2999;3000;3001;3002;3003 3415;3416;3417;3418;3419 3416 5 ALLFGHTASITCLSK Unmodified 1617.8549 0.85486267 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 6.5 5.5 2 2 67.199 67.199 3;4 2.328E-22 16564 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 134.88 115.05 133.01 135.59 162.5 53.435 222.28 95.792 125 135 158 56 218 93 3 3 3 2 4 2 26804 1276 2790 1256 3004;3005;3006;3007 3420;3421;3422;3423 3423 4 ALLFIPR Unmodified 828.52216 0.52215921 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 6.75 5.76 2 1 1 70.867 70.867 2 0.0055603 24292 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 136.29 0 1262.9 790.49 1779.8 1538.4 1320.4 1559.4 1187 807 1758 1519 1336 1485 5 7 8 7 7 5 1244400 1277 1354 1257 3008;3009;3010;3011 3424;3425;3426;3427;3428;3429;3430;3431 3426 8 ALLFVPR Unmodified 814.50651 0.50650915 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 9.25 4.82 1 1 1 1 66.44 66.44 2 0.0098617 22586 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 123.34 29.185 4839.2 4623.8 5293 5891.3 6677.4 5781 4565 4727 5401 5784 6811 5600 9 8 7 7 6 5 1793700 1278 1322 1258 3012;3013;3014;3015 3432;3433;3434;3435;3436;3437;3438;3439;3440;3441 3433 10 ALLGYADNQCK Unmodified 1251.5918 0.59177169 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 10 2.16 1 1 1 56.981 56.981 2;3 7.2151E-11 17370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.96 90.642 78.389 168.6 163.93 140.4 93.469 88.478 74 166 167 139 93 83 1 2 2 2 1 1 12236 1279 2899 1259 3016;3017;3018 3442;3443;3444 3442 3 ALLIQAVK Unmodified 854.55894 0.55893865 3132 Q9DBS2;B1AX95 Tprg1l;Tprgl Tumor protein p63-regulated gene 1-like protein yes no 0 0 0 0 7.6 5.43 2 1 1 1 67.193 67.193 2 0.0012666 17884 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 140.53 52.537 563.44 530.85 214.65 445.95 387.61 569.12 528 538 218 423 387 539 6 7 3 5 4 6 131170 1280 3132 1260 3019;3020;3021;3022;3023 3445;3446;3447;3448;3449;3450;3451;3452 3448 8 ALLISTGYSLGDAEFNR Unmodified 1825.921 0.92102798 310 A0A1L1SV25 no no 0 0 0 0 9.5 0.5 1 1 78.392 78.392 3 9.345E-07 26588 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.26 84.15 0 0 0 80.882 0 39.442 0 0 0 74 0 37 0 0 0 1 0 1 12551 1281 310 1261 3024;3025 3453;3454 3453 2 ALLLLCGGEDD Unmodified 1174.554 0.5539892 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 7 0 1 86.301 86.301 2 0.00013243 31631 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.265 72.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1282 1577 1262 3026 3455 3455 1 ALLLSTYIK Unmodified 1020.6219 0.62193284 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 6.75 5.76 2 1 1 77.077 77.077 2;3 1.4228E-34 26557 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 201.97 131.38 778.85 540.66 648.57 557.34 739.07 938.31 732 551 646 558 745 900 9 4 4 7 4 8 107830 1283 1400;1401 1263 3027;3028;3029;3030 3456;3457;3458;3459;3460;3461;3462;3463;3464 3457 9 ALLNVVDSAR Unmodified 1056.5928 0.59275797 1193 O35405 Pld3 Phospholipase D3 yes yes 0 0 0 0 8.5 0.5 1 1 62.513 62.513 2 0.0052204 18957 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.028 44.856 99.001 70.851 72.345 66.733 0 69.29 93 74 74 65 0 65 1 1 1 1 0 1 9477.8 1284 1193 1264 3031;3032 3465;3466 3466 2 ALLPHVLCK Unmodified 1049.6056 0.60557126 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 11.5 0.5 1 1 58.983 58.983 3 0.00042373 13887 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.253 61.532 127.31 127.46 135.85 260.59 265.39 152.85 120 130 139 259 269 148 1 1 1 2 2 1 58472 1285 1873 1265 3033;3034 3467;3468;3469 3469 3 ALLPILQWHK Unmodified 1217.7285 0.72846359 480 A2AJP9;A8Y5Q0;A2AJQ0;Q3UV70 Pdp1 [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial yes no 0 0 0 0 1 0 1 78.081 78.081 3 0.00085688 27130 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.334 51.82 39.701 0 0 30.098 45.444 67.993 37 0 0 28 47 65 1 0 0 1 2 2 3671.7 1286 480 1266 3035 3470;3471 3470 2 ALLPTEQESR Unmodified 1142.5932 0.5931519 2303 Q80TL4;F6SBE4 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 5.5 0.5 1 1 48.729 48.729 2 3.4896E-15 14711 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 172.25 111.57 157.41 184.92 78.32 154.58 191.89 144.86 148 185 79 149 195 139 3 3 1 3 3 2 21270 1287 2303 1267 3036;3037 3472;3473;3474 3474 3 ALLQEMPLTALLR Unmodified 1467.8483 0.84832073 1167 O08848 Trove2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 0 11 0 1 92.132 92.132 3 0.010078 29654 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.357 31.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3255.8 1288 1167 1268 3038 3475 3475 1 ALLQLWQR Unmodified 1026.5974 0.59744942 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 1 0 1 74.041 74.041 2 0.007536 25320 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.2 49.079 39.089 56.022 55.408 36.493 34.35 77.904 37 56 56 37 37 74 1 1 1 1 1 1 4038.8 1289 305 1269 3039 3476 3476 1 ALLQMVQQFAVDFEK Oxidation (M) 1781.9022 0.9022068 118;1534;960 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98 Dnm1;Dnm3 Dynamin-1;Dynamin-3 no no 0 0 1 0 10 3.57 1 1 1 5 100.67 100.67 3 5.3909E-11 27051 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.32 100.98 53.327 49.002 52.299 41.665 53.955 62.706 50 48 51 41 53 60 5 4 5 6 5 5 13509 1290 118;1534;960 1270 3040;3041;3042;3043;3044;3045;3046;3047 3477;3478;3479;3480;3481;3482;3483;3484;3485;3486;3487;3488 3480 11 12 ALLQMVQQFAVDFEK Unmodified 1765.9073 0.90729217 118;1534;960 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98 Dnm1;Dnm3 Dynamin-1;Dynamin-3 no no 0 0 0 0 8.8 5.13 3 1 4 2 109.5 109.5 3;4 6.5004E-30 35554 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 153.18 127.63 269.09 167.35 82.824 162.02 180.82 121.16 263 165 82 154 181 117 8 11 5 10 11 8 106570 1291 118;1534;960 1270 3048;3049;3050;3051;3052;3053;3054;3055;3056;3057 3489;3490;3491;3492;3493;3494;3495;3496;3497;3498;3499;3500;3501;3502;3503;3504;3505;3506;3507;3508;3509 3496 21 ALLQSSASR Unmodified 931.50869 0.50869399 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 0 9.5 0.5 1 1 40.283 40.283 2 3.0638E-05 8874 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142.04 72.416 108.63 0 137.59 56.666 82.634 0 102 0 130 55 79 0 2 0 2 1 1 0 19558 1292 1599 1271 3058;3059 3510;3511 3510 2 ALLQSVR Unmodified 785.47594 0.4759373 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 10 0 1 48.366 48.366 2 0.034552 11035 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.146 15.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1293 1999 1272 3060 3512 3512 1 ALLSAPWYLNR Unmodified 1302.7085 0.70845643 1486 P29416 Hexa Beta-hexosaminidase subunit alpha yes yes 0 0 0 0 6.5 5.5 2 2 76.596 76.596 2;3 8.093E-09 20433 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.84 75.282 138.48 177.9 122.79 20.767 56.251 107.13 130 176 120 19 56 102 3 4 2 1 2 4 28050 1294 1486 1273 3061;3062;3063;3064 3513;3514;3515;3516;3517 3517 5 ALLSAVTR Unmodified 829.50215 0.50215205 799;1454 E0CXB9;Q61301;Q8BS72;P26231 Ctnna2;Ctnna1 Catenin alpha-2;Catenin alpha-1 no no 0 0 0 0 11 0 1 54.616 54.616 2 0.012502 13440 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.123 14.684 0 0 372.21 0 438.27 0 0 0 344 0 419 0 0 0 1 0 1 0 31322 1295 799;1454 1274 3065 3518 3518 1 ALLSTMHTVLWAGETK Unmodified 1756.9182 0.91819121 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 6.5 5.5 1 1 76.72 76.72 3 0.00048759 20427 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.079 32.489 79.314 17.545 0 20.767 19.874 0 74 19 0 19 19 0 2 1 0 1 1 0 13343 1296 2306 1275 3066;3067 3519;3520 3520 2 ALLSVLR Unmodified 770.50142 0.50142377 278 G3UYW1;A0A1D5RLV7;Q6VNB8 Wdfy3 WD repeat and FYVE domain-containing protein 3 yes no 0 0 0 0 1 0 1 66.293 66.293 2 0.044734 22293 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.944 31.177 39.564 27.124 0 30.604 0 29.848 37 28 0 28 0 28 1 1 0 1 0 1 2798.4 1297 278 1276 3068 3521 3521 1 ALLSYPLPFFAAVEVLEK Unmodified 2006.1129 0.1128515 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 11.5 1.12 1 1 1 1 112.32 112.32 3 3.7797E-14 36193 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.92 105.09 27.145 1.6844 23.742 5.1639 0 14.924 26 2 23 5 0 14 4 1 3 1 0 2 10157 1298 1201 1277 3069;3070;3071;3072 3522;3523;3524;3525;3526;3527 3524 6 ALLTFYHVTK Unmodified 1191.6652 0.66519463 2601 Q8K2V6 Ipo11 Importin-11 yes yes 0 0 0 0 1 0 1 65.293 65.293 3 0.030214 21911 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.718 24.853 36.103 0 63.656 0 0 49.036 34 0 59 0 0 46 1 0 1 0 0 1 2962 1299 2601 1278 3073 3528 3528 1 ALLTPQDEECADGDTEVDVIAEQLK Unmodified 2758.2855 0.28548508 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 3.67 0.471 1 2 84.941 84.941 3;4 1.8208E-07 31218 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.469 43.616 36.445 9.2416 26.198 5.9579 26.922 20.254 34 9 25 6 26 19 2 1 2 1 2 1 4146.3 1300 570 1279 3074;3075;3076 3529;3530;3531;3532 3529 4 ALLTPVAIAAGR Unmodified 1151.7026 0.70264277 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 9 4.64 1 1 2 68.339 68.339 2;3 1.4035E-11 19263 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.33 85.233 158.34 326.96 368.91 60.012 544.17 156.03 148 320 354 56 528 152 3 3 1 1 4 3 72025 1301 1566 1280 3077;3078;3079;3080 3533;3534;3535;3536 3534 4 ALLTTGSLR Unmodified 930.54983 0.54983053 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10.5 0.5 1 1 53.692 53.692 2 5.7375E-06 13019 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 155.88 102.52 404.81 368.51 0 131.16 0 138.58 379 372 0 120 0 130 2 2 0 1 0 1 112630 1302 927 1281 3081;3082 3537;3538 3538 2 ALMEEFFR Unmodified 1041.4954 0.49535211 373 Q6PDS5;A0A2I3BPC1;Q01065 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 8 0 1 77.246 77.246 2 0.010921 26749 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.531 66.444 0 0 0 39.398 55.466 37.859 0 0 0 37 56 37 0 0 0 1 1 1 3856.4 1303 373 1282 3083 3539 3539 1 ALMLQGVDLLADAVAVTMGPK Oxidation (M) 2128.1272 0.12719771 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 1 0 10.7 0.471 1 2 110.69 110.69 3 7.5128E-07 33590 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.723 50.469 9.5993 3.0322 19.246 0 0 30.518 9 3 18 0 0 29 1 1 2 0 0 3 2591.8 1304 1766 1283 3084;3085;3086 3540;3541;3542 3540 138;139 3 ALMLQGVDLLADAVAVTMGPK Unmodified 2112.1323 0.13228309 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 11.6 1.02 1 1 2 1 115.19 115.19 3;4 3.6009E-30 36666 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.11 111.47 101.65 13.835 79.066 3.279 7.7532 77.597 98 14 74 3 8 73 5 1 8 1 1 8 26710 1305 1766 1283 3087;3088;3089;3090;3091 3543;3544;3545;3546;3547;3548;3549;3550;3551;3552;3553 3547 11 ALMPVLLQGQAR Unmodified 1295.7384 0.73837635 3381 Q9Z1Q2 Abhd16a Abhydrolase domain-containing protein 16A yes yes 0 0 0 0 12 0 1 70.502 70.502 2 0.00091604 17977 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.059 40.037 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 3358.2 1306 3381 1284 3092 3554 3554 1 ALMQLDFQQFLMK Unmodified 1611.8153 0.81530604 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 11 0 1 95.252 95.252 3 0.0012175 30986 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.157 39.494 0 9.576 0 16.395 0 0 0 9 0 15 0 0 0 1 0 1 0 0 1239.7 1307 2554 1285 3093 3555 3555 1 ALNEGGLQSIPK Unmodified 1225.6667 0.6666512 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 6 0 1 58.448 58.448 3 0.0081509 19358 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.627 10.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1308 2244 1286 3094 3556 3556 1 ALNFLVNEFLLK Unmodified 1419.8126 0.81258715 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7;A0A087WRM8 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 11.5 0.5 1 1 101.77 101.77 3 9.8763E-05 28747 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.718 64.708 17.037 43.731 8.6033 12.603 0 6.396 16 44 9 12 0 6 2 3 1 1 0 1 6239.5 1309 35 1287 3095;3096 3557;3558;3559;3560 3559 4 ALNGADVDDFTWEPPTEAETK Acetyl (Protein N-term);Deamidation (N) 2348.0332 0.033216786 807 E0CYU9;P56873 Sssca1 Sjoegren syndrome/scleroderma autoantigen 1 homolog yes no 1 1 0 0 2.5 0.5 1 1 89.511 89.511 3 3.1674E-06 29365 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.637 42.974 7.4631 4.7496 4.0176 9.4497 7.8625 2.0797 7 5 4 9 8 2 2 2 1 2 2 1 2162.2 1310 807 1288 3097;3098 3561;3562 3561 211 2 ALNGFTPLHIACK Deamidation (N) 1441.7388 0.73877028 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;G5E8J2;D3Z5M4;D3YTV8;G8JL84;E9QNT8;B7ZW98;A0A0R4J1N7;G3UY11;Q02357;Q0VGY9;D6RJ51;S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R2R5;S4R2T7 Ank3;Ank1;Ank2 Ankyrin-3;Ankyrin-1;Ankyrin-2 no no 0 1 0 0 9.75 1.92 1 2 1 66.366 66.366 3 0.00029647 21509 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.527 57.688 206 231.72 233.95 264.77 290.37 288.06 194 232 231 260 296 278 3 3 2 4 3 3 32157 1311 3450;3449;3451;3452 1289 3099;3100;3101;3102 3563;3564;3565;3566 3563 1159 4 ALNLAYSSIYGSYR Unmodified 1576.7886 0.78855725 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 11.3 0.471 2 1 71.006 71.006 2;3 1.6314E-14 20523 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.97 75.228 59.806 0 47.356 47.456 0 69.29 56 0 46 46 0 65 1 0 1 1 0 1 14429 1312 2282 1290 3103;3104;3105 3567;3568;3569 3568 3 ALNVEPDGTGLTCSLAPNILSQL Unmodified 2382.2101 0.21007572 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 8.2 2.64 1 2 2 2 1 2 101.7 101.7 3;4 5.5206E-12 36781 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.672 63.476 84.61 54.505 54.254 68.922 61.722 96.853 79 53 52 66 62 92 6 6 4 7 6 8 116210 1313 1867 1291 3106;3107;3108;3109;3110;3111;3112;3113;3114;3115 3570;3571;3572;3573;3574;3575;3576;3577;3578;3579;3580;3581;3582 3575 13 ALPAMMQWIR Unmodified 1215.6257 0.62565478 1080 G3X9A7;Q8BLJ3 Plcxd3 PI-PLC X domain-containing protein 3 yes no 0 0 0 0 8.33 5.19 1 2 81.048 81.048 2;3 4.5349E-05 22178 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.635 76.004 78.178 35.32 65.309 57.305 65.358 0 74 37 65 56 65 0 3 1 2 1 1 0 14093 1314 1080 1292 3116;3117;3118 3583;3584;3585 3584 3 ALPDMEVVGLNFSSATTPELLLK Unmodified 2444.2873 0.2872634 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 0 1 98.699 98.699 4 9.5245E-05 35342 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.656 33.234 9.657 0 0 30.604 0 9.594 9 0 0 28 0 9 1 0 0 1 0 1 785.74 1315 3204 1293 3119 3586 3586 1 ALPDTQITSYAATLHR Unmodified 1756.9108 0.91079765 2508 Q8C729;E0CZ67;A0A087WSI2 Fam126b Protein FAM126B yes no 0 0 0 0 7 0 1 61.519 61.519 3 0.00035934 19934 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.127 36.784 69.745 0 0 0 57.278 37.808 65 0 0 0 56 37 1 0 0 0 1 1 4528.7 1316 2508 1294 3120 3587 3587 1 ALPESAEEQPSLYEK Unmodified 1689.8097 0.8097462 3054 Q9D328 Tmem35 Transmembrane protein 35 yes yes 0 0 0 0 4 0 1 60.04 60.04 3 0.00036103 21068 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.219 49.679 0 0 0 28.996 85.486 0 0 0 0 28 83 0 0 0 0 1 1 0 2872.1 1317 3054 1295 3121 3588 3588 1 ALPFWNEEIAPK Unmodified 1413.7293 0.72925145 1246 O70250 Pgam2 Phosphoglycerate mutase 2 yes yes 0 0 0 0 8 0 1 79.298 79.298 2 0.0043272 27698 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.347 26.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1318 1246 1296 3122 3589 3589 1 ALPFWNEEIVPQIK Unmodified 1682.9032 0.90319307 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 9 2.86 1 1 3 2 2 2 1 1 88.232 88.232 2;3;4 7.0804E-30 31039 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 160.15 122.13 753.83 466.28 832.93 628.42 1010 943.89 710 474 814 626 1011 907 11 7 10 11 12 11 734170 1319 3126 1297 3123;3124;3125;3126;3127;3128;3129;3130;3131;3132;3133;3134;3135 3590;3591;3592;3593;3594;3595;3596;3597;3598;3599;3600;3601;3602;3603;3604;3605;3606;3607 3598 18 ALPFWNEEIVPQIK Deamidation (N) 1683.8872 0.88720866 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 1 0 0 9.67 2.36 2 1 89.894 89.894 3 0.00025873 32443 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.496 53.438 29.904 57.097 28.173 57.751 36.424 0 28 56 28 55 37 0 1 2 1 2 1 0 6920.1 1320 3126 1297 3136;3137;3138 3608;3609;3610 3608 1093 3 ALPGHLKPFETLLSQNQGGK Unmodified 2134.1535 0.15348753 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 0 0 1 10.9 1.25 1 2 2 1 1 67.563 67.563 3;4;5 1.1301E-17 19902 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.43 108.67 1259.5 1376.7 1357.7 1317.4 1644.3 1272.7 1183 1395 1358 1291 1647 1227 6 8 6 7 6 6 362320 1321 1414 1298 3139;3140;3141;3142;3143;3144;3145 3611;3612;3613;3614;3615;3616;3617;3618;3619;3620 3615 10 ALPGHLKPFETLLSQNQGGK Deamidation (N) 2135.1375 0.13750312 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 1 0 1 10 0 1 69.728 69.728 4 0.0027691 20301 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.221 28.914 79.032 73.407 0 0 86.818 0 74 74 0 0 83 0 1 1 0 0 1 0 7161 1322 1414 1298 3146 3621 3621 514 1 ALPLSPAQELQR Unmodified 1321.7354 0.73539946 371 Q921Q7;A0A2C9F2A2;A0A286YCR5 Rin1 Ras and Rab interactor 1 yes no 0 0 0 0 7 0 1 61.064 61.064 3 0.055346 19751 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.204 15.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6019.7 1323 371 1299 3147 3622 3622 1 ALPPALAALR Unmodified 991.61785 0.61785051 3203 Q9JHK4;A0A2K6EDL0 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 0 10 0 1 67.644 67.644 2 0.0045884 19515 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.741 32.938 0 127.06 100.68 46.263 140.95 67.416 0 121 102 46 139 65 0 2 2 1 2 1 10088 1324 3203 1300 3148 3623;3624 3624 2 ALPPLALFTSK Unmodified 1156.6856 0.68559572 3120 Q9DBE0;A0A2R8VHW7;A0A2R8VHJ2;A0A2R8VK32;A0A2R8VHX0;A0A2R8VK60 Csad Cysteine sulfinic acid decarboxylase yes no 0 0 0 0 6.25 5.26 2 1 1 84.666 84.666 2;3 0.00051138 23473 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.655 52.717 70.486 65.782 0 30.248 18.936 0 66 65 0 28 19 0 3 2 0 2 1 0 8659.8 1325 3120 1301 3149;3150;3151;3152 3625;3626;3627;3628 3628 4 ALPQICLLSNPHSR Unmodified 1604.8457 0.84569497 954 Q8CHT1;E9QK62 Ngef Ephexin-1 yes no 0 0 0 0 10 0 1 60.886 60.886 3 8.4456E-06 16474 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.192 57.096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1326 954 1302 3153 3629 3629 1 ALPSPIEK Unmodified 853.49092 0.49091866 72 F6TQW2;A0A0A6YY53;P01864 Ighg2c Ig gamma-2A chain C region secreted form yes no 0 0 0 0 7.5 0.5 1 1 56.145 56.145 2 0.00595 17392 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.04 45.419 79.182 43.605 0 0 76.124 37.27 74 46 0 0 74 37 1 1 0 0 1 1 4533.6 1327 72 1303 3154;3155 3630;3631 3630 2 ALPSSEDLASLAPDLDKITESLSLLK Unmodified 2725.4637 0.46370744 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 1 8.5 0.5 1 1 104.93 104.93 4 5.8596E-23 36482 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.542 82.576 33.263 6.384 0 0 15.69 15.99 31 6 0 0 15 15 1 1 0 0 1 1 3800.4 1328 1653 1304 3156;3157 3632;3633 3632 2 ALPSTGPQSLR Unmodified 1125.6142 0.6142217 2527 Q8CE50 Snx30 Sorting nexin-30 yes yes 0 0 0 0 7 0 1 47.458 47.458 2 0.0097216 13281 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.547 15.937 29.818 17.824 22.825 18.894 27.275 33.334 28 19 23 19 28 32 1 1 1 1 1 1 2879.8 1329 2527 1305 3158 3634 3634 1 ALPTPPGAPGPQAILQK Unmodified 1654.9406 0.94064121 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 9 0.707 1 2 1 70.855 70.855 3;4 1.1477E-06 23809 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.534 48.259 123.4 143.97 162.07 0 168.4 182.81 116 139 158 0 167 176 2 2 3 0 3 3 30084 1330 885 1306 3159;3160;3161;3162 3635;3636;3637;3638 3635 4 ALPVLTLFTK Unmodified 1101.6798 0.67978207 2974 Q9CWB7 Glutaredoxin-like protein C5orf63 homolog yes yes 0 0 0 0 1 0 1 90.566 90.566 2 0.000109 32228 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.7 71.569 0 15.643 18.949 15.051 11.433 12.466 0 15 19 15 12 12 0 1 1 1 1 1 1459.5 1331 2974 1307 3163 3639 3639 1 ALQASALK Unmodified 800.4756 0.47560295 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 10 2 1 1 1 1 1 1 1 50.064 50.064 2;3 2.3119E-06 13093 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.99 33.714 5255.6 4358.4 6100.8 5397.3 5309.5 5272.9 4943 4473 6106 5345 5424 5056 7 9 9 8 8 5 1160900 1332 1309 1308 3164;3165;3166;3167;3168;3169;3170 3640;3641;3642;3643;3644;3645;3646;3647;3648;3649;3650 3643 11 ALQASALKAWGGK Unmodified 1299.7299 0.72992016 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 6.5 5.5 1 1 62.369 62.369 3 0.00016205 14887 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.371 74.814 49.07 187.77 90.057 100.26 78.739 131 46 181 98 97 83 125 1 2 2 1 1 2 11010 1333 1309 1309 3171;3172 3651;3652 3652 2 ALQASALNAWR Unmodified 1199.6411 0.64110515 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 9.56 3.47 1 1 2 1 1 1 2 61.96 61.96 2;3 1.7894E-80 17010 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 229.38 160.75 700.2 557.26 508.61 486.04 589.26 407.19 658 570 496 463 588 389 9 7 5 7 6 5 430610 1334 1308 1310 3173;3174;3175;3176;3177;3178;3179;3180;3181 3653;3654;3655;3656;3657;3658;3659;3660;3661;3662;3663 3658 11 ALQASALNAWR Deamidation (N) 1200.6251 0.62512073 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 1 0 0 7 0 2 62.578 62.578 2;3 0.024587 19392 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.286 28.546 29.904 76.119 35.904 27.608 45.538 38.143 28 74 37 28 46 37 1 2 1 1 1 1 13692 1335 1308 1310 3182;3183 3664;3665 3664 363 2 ALQATVGNSYK Unmodified 1150.5982 0.59823728 1353 P11438 Lamp1 Lysosome-associated membrane glycoprotein 1 yes yes 0 0 0 0 8.5 0.5 1 1 50.604 50.604 2 0.0014731 14221 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.344 41.95 9.535 0 20.51 0 29.288 0 9 0 19 0 28 0 1 0 1 0 1 0 5706.6 1336 1353 1311 3184;3185 3666;3667 3666 2 ALQDEWDAVMLHSFTLR Unmodified 2030.9884 0.98839604 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 0 0 0 7 0 1 87.702 87.702 3 0.00024939 32292 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.779 32.826 29.839 17.881 19.335 0 0 0 28 19 19 0 0 0 1 1 1 0 0 0 1260.8 1337 2847 1312 3186 3668 3668 1 ALQDILDFTGPPAFPK Unmodified 1728.9087 0.90867238 461 A2AG50 Map7d2 MAP7 domain-containing protein 2 yes yes 0 0 0 0 8.5 0.5 1 1 94.582 94.582 3 0.00015951 34207 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.489 40.393 30.044 0 0 0 0 39.442 28 0 0 0 0 37 1 0 0 0 0 1 1951.6 1338 461 1313 3187;3188 3669;3670 3669 2 ALQDQSQR Unmodified 944.46756 0.46755746 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 4.5 0.5 1 1 27.596 27.596 2 0.007574 5296 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.1 53.766 0 0 0 0 23 0 0 0 0 0 23 0 0 0 0 0 1 0 3377.2 1339 2511 1314 3189;3190 3671;3672 3672 2 ALQDQVSSQSADAQEQVEGLLAENSALR Unmodified 2956.4374 0.43738613 453 A2AEW8;A2AEW9 Gripap1 yes no 0 0 0 0 4 0 1 81.055 81.055 4 0.038323 30433 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 24.653 11.333 20.387 0 0 0 19.564 9.0357 19 0 0 0 19 9 1 0 0 0 1 1 2113.9 1340 453 1315 3191 3673 3673 1 ALQESSHR Unmodified 926.45699 0.45699277 2362 Q8BFT9 Svop Synaptic vesicle 2-related protein yes yes 0 0 0 0 6 0 1 21.477 21.477 3 0.0081043 3089 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.169 32.277 14.884 3.9844 19.858 8.6534 0 0 14 5 19 9 0 0 1 1 1 1 0 0 389.05 1341 2362 1316 3192 3674 3674 1 ALQFLEQVK Unmodified 1074.6073 0.6073454 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 10 1.87 1 1 1 1 75.371 75.371 2;3 0.00048553 25086 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.74 55.116 177.89 143.86 96.742 329.38 120.8 94.625 167 148 102 315 120 92 3 3 2 4 1 2 47282 1342 1826 1317 3193;3194;3195;3196 3675;3676;3677;3678 3676 4 ALQGASQIIAEIR Unmodified 1368.7725 0.77251325 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 9.25 2.28 1 1 1 1 73.222 73.222 2 6.6666E-05 27413 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.97 72.445 199.35 153.44 0 308.3 228.58 261.85 186 148 0 286 232 250 3 2 0 4 2 2 31292 1343 815;2590 1318 3197;3198;3199;3200 3679;3680;3681;3682 3682 4 ALQLGTLFSPAEALK Unmodified 1557.8766 0.87664397 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 10.8 1.48 1 1 1 1 87.478 87.478 2;3 2.7996E-17 28152 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.24 97.352 49.358 104.27 0 108.98 133.17 98.412 46 98 0 102 134 94 1 3 0 2 2 3 36080 1344 1541 1319 3201;3202;3203;3204 3683;3684;3685;3686 3684 4 ALQLLVNYHGCR Unmodified 1442.7453 0.74525264 427 A2A5I7;Q9D3D0 Ttpal Alpha-tocopherol transfer protein-like yes no 0 0 0 0 12 0 1 59.907 59.907 3 0.0025441 14137 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.7 42.084 0 47.03 114.51 62.152 109.95 96 0 46 111 65 111 93 0 1 1 1 1 1 4957.8 1345 427 1320 3205 3687 3687 1 ALQNAVSTFVNR Unmodified 1318.6993 0.69934831 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 10 0 1 65.764 65.764 3 3.144E-08 18471 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.35 71.824 20.195 38.006 0 0 48.116 0 19 37 0 0 46 0 1 1 0 0 1 0 7819.2 1346 589 1321 3206 3688 3688 1 ALQSLACGKPTQR Unmodified 1428.7507 0.75073195 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 1 10.5 0.5 1 1 46.744 46.744 3 7.025E-15 10447 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.76 70.077 0 78.736 0 0 97.278 0 0 74 0 0 93 0 0 1 0 0 1 0 6569.2 1347 3245 1322 3207;3208 3689;3690 3689 2 ALQSVGQIVGEVLK Unmodified 1439.8348 0.83477916 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 8.5 0.5 1 1 89.098 89.098 3 9.4195E-05 31400 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.909 45.796 20.265 0 58.79 38.156 9.414 0 19 0 56 37 9 0 1 0 2 1 1 0 6436.9 1348 1726 1323 3209;3210 3691;3692 3692 2 ALQTTYGTNAPR Unmodified 1291.6521 0.65206377 2534 Q8CG76 Akr7a2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 0 6.5 0.5 1 1 42.702 42.702 2 2.3683E-14 11103 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.75 96.594 0 0 20.181 8.4645 37.025 0 0 0 19 9 37 0 0 0 1 1 2 0 4017.5 1349 2534 1324 3211;3212 3693;3694 3694 2 ALQTVIEMK Unmodified 1031.5685 0.56851706 2249;1027 Q6PH08;Q3UHT7;A0A1B0GSQ8;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 8.5 0.5 1 1 68.167 68.167 2 4.795E-07 22513 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.63 64.645 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 3107.2 1350 2249;1027 1325 3213;3214 3695;3696 3695 2 ALQVGCLLR Unmodified 1028.5801 0.5800848 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 10 0 1 64.211 64.211 2 0.046375 17829 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.721 26.651 1138.1 866.13 1135.8 824.24 1101.9 1291.5 1071 904 1137 835 1132 1241 1 1 1 1 1 1 35231 1351 1400 1326 3215 3697 3697 1 ALQVMTDFAIQFNR Unmodified 1652.8345 0.83446158 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 11 0 1 89.21 89.21 3 0.0061059 28506 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.545 20.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1352 1203 1327 3216 3698 3698 1 ALQYEYASK Unmodified 1071.5237 0.52367535 273 Q8BTX9;A0A1D5RLG0 Hsdl1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes no 0 0 0 0 7 0 1 52.293 52.293 2 0.010686 15599 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.533 38.2 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 1934.3 1353 273 1328 3217 3699 3699 1 ALRPTIFPVVPR Unmodified 1364.8292 0.82924027 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;Q8BYJ0;E9Q7Y2 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 1 8 4.97 1 1 1 61.838 61.838 3 5.431E-12 20745 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.33 17.294 148.03 184.94 326.22 249.09 107.38 263.44 139 176 315 241 111 250 2 2 3 3 1 3 100090 1354 2753 1329 3218;3219;3220 3700;3701;3702;3703 3700 4 ALSAGNIDDALQCYSEAIK Unmodified 2037.9677 0.96772018 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 81.996 81.996 3;4 3.0565E-22 31723 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.1 87.161 40.202 75.283 108.03 0 115.52 47.411 38 75 102 0 112 46 2 3 2 0 2 1 29414 1355 2092 1330 3221;3222;3223;3224;3225 3704;3705;3706;3707;3708 3708 5 ALSCLYGK Unmodified 910.45824 0.45823833 101 A0A0G2JGE1;Q71RI9 Ccbl2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 0 10 0 1 57.941 57.941 2 0.015661 15235 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.206 36.78 0 59.584 0 0 116.11 0 0 56 0 0 111 0 0 1 0 0 1 0 40230 1356 101 1331 3226 3709 3709 1 ALSDADVQK Acetyl (Protein N-term) 987.48729 0.48728985 1597 P50518;A0A0N4SW34 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 1 0 0 0 4.29 3.77 1 2 1 1 1 1 54.348 54.348 2;3 1.1479E-72 18432 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 147.52 122.35 628.81 361.2 984.11 631.2 802.39 883.18 592 389 956 634 817 849 3 3 5 4 4 5 653540 1357 1597 1332 3227;3228;3229;3230;3231;3232;3233 3710;3711;3712;3713;3714;3715;3716 3714 7 ALSDLIGATK Unmodified 987.56006 0.56006086 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 9 0 1 70.419 70.419 2 0.0073581 22955 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.399 33.952 0 0 100.63 0 94.332 85.786 0 0 93 0 93 83 0 0 1 0 1 1 8363.1 1358 287 1333 3234 3717 3717 1 ALSDLVK Unmodified 744.43815 0.43815481 498 H3BIW6;F7C3A0;A2AP18;H3BK11 Plch2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 yes no 0 0 0 0 8 0 1 60.408 60.408 2 0.041523 18807 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.847 15.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1359 498 1334 3235 3718 3718 1 ALSDSYELSTDLQDK Unmodified 1683.7839 0.78392538 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 4 0 1 68.034 68.034 3 0.004349 24477 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.318 26.211 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 2843.2 1360 553 1335 3236 3719 3719 1 ALSEIAGITLPYDTLDQVR Unmodified 2074.0946 0.094635252 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 8 2.31 1 3 1 1 89.253 89.253 2;3 4.1144E-10 33647 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.75 91.051 59.951 36.124 0 110.64 44.891 19 56 37 0 102 46 19 2 2 0 2 1 1 44530 1361 2736 1336 3237;3238;3239;3240;3241;3242 3720;3721;3722;3723;3724;3725;3726 3720 7 ALSFFQQK Unmodified 967.51272 0.51271674 681 D3YVM6;D3Z336;V9GXF5;V9GXH9;D3YUM4;D3YZ30;Q62178 Sema4a Semaphorin-4A yes no 0 0 0 0 11.5 0.5 1 1 67.653 67.653 2 0.0046984 19021 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.73 78.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5873.5 1362 681 1337 3243;3244 3727;3728 3727 2 ALSINTLVK Unmodified 957.58588 0.58588168 492 A2ALV7;Q6PDI5 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 10 0 1 66.931 66.931 2 0.023865 19060 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.593 25.713 0 68.603 33.327 58.17 55.904 0 0 65 37 56 56 0 0 1 1 1 1 0 1884.6 1363 492 1338 3245 3729 3729 1 ALSLGGQVWGNFLSCFSPEYR Unmodified 2387.1369 0.13685119 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 12 0.816 1 1 1 98.18 98.18 3 1.1362E-11 28044 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.4 97.497 0 15.858 6.1151 5.465 0 48.66 0 15 6 5 0 48 0 2 1 1 0 3 31000 1364 3216 1339 3246;3247;3248 3730;3731;3732;3733 3731 4 ALSLIGK Unmodified 700.44833 0.44832557 1418 P19783;M0QWX2 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 62.674 62.674 2 0.011479 16708 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.89 0 572.7 405.24 244.77 224.49 189.72 236.57 537 421 245 222 199 227 2 2 1 1 1 1 43877 1365 1418 1340 3249;3250 3734;3735 3735 2 ALSLLLHAADISHPTK Unmodified 1685.9465 0.94645487 373 Q6PDS5;A0A2I3BPC1;Q01065 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 11.5 0.5 1 1 71.421 71.421 4 0.00040586 20615 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.885 40.729 39.468 65.849 38.86 0 75.098 116.18 37 65 37 0 74 111 1 2 1 0 1 2 10332 1366 373 1341 3251;3252 3736;3737 3736 2 ALSNLESIPGGYNALR Unmodified 1673.8737 0.87368386 2657 Q8R317 Ubqln1 Ubiquilin-1 yes yes 0 0 0 0 7 0 1 70.264 70.264 3 0.0029012 24105 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.324 24.767 58.434 141.31 158.15 90.521 90.499 76.302 56 139 158 93 93 74 1 1 1 1 1 1 5820.3 1367 2657 1342 3253 3738 3738 1 ALSQAGEATAGHPEEATVIQAESQAK Unmodified 2593.262 0.26198794 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 3 0 1 54.652 54.652 4 2.5363E-20 18821 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.362 60.927 39.701 0 0 39.392 55.796 28.256 37 0 0 37 56 28 1 0 0 1 1 1 4421.1 1368 692 1343 3254 3739 3739 1 ALSQAMLLTPYLPPPLLR Unmodified 1993.1434 0.14344012 2821 Q924L1 Letmd1 LETM1 domain-containing protein 1 yes yes 0 0 0 0 1 0 1 96.389 96.389 3 0.00074435 33438 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.883 38.53 0 9.576 0 5.465 0 0 0 9 0 5 0 0 0 1 0 1 0 0 465.8 1369 2821 1344 3255 3740 3740 1 ALSQLAEVEEK Unmodified 1215.6347 0.63468237 2207;2978 Q9CWK8;Q9WV80;Q6NZD2 Snx2;Snx1 Sorting nexin-2;Sorting nexin-1 no no 0 0 0 0 5 0 1 64.161 64.161 2 2.794E-08 22571 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.85 75.52 0 0 0 34.201 41.23 32.935 0 0 0 32 42 32 0 0 0 1 1 1 3897.8 1370 2978;2207 1345 3256 3741 3741 1 ALSQPDTVLR Unmodified 1098.6033 0.60332266 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 10 3 1 1 50.441 50.441 2 1.1605E-05 16376 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.1 68.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1371 2741 1346 3257;3258 3742;3743 3743 2 ALSSAGQHVAR Unmodified 1095.5785 0.57850489 611 E9PZ16;B1B0C7;Q05793 Hspg2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes no 0 0 0 0 7 0 1 29.366 29.366 3 0.0002989 5129 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.014 56.271 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 936.39 1372 611 1347 3259 3744 3744 1 ALSSEGKPYVTK Unmodified 1278.682 0.68196691 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9.57 2.38 2 1 1 1 2 48.893 48.893 3;4 5.3438E-05 12539 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.551 67.142 875.57 1345.3 1284 850.15 887.03 1353.7 824 1340 1292 841 911 1291 5 7 6 3 4 5 193450 1373 551 1348 3260;3261;3262;3263;3264;3265;3266 3745;3746;3747;3748;3749;3750;3751 3748 7 ALSSESFER Unmodified 1024.4825 0.48253882 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 5 0 1 45.775 45.775 2 0.063565 13944 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.089 23.987 78.539 62.322 92.261 94.953 63.628 0 74 65 93 93 65 0 1 1 1 1 1 0 4796.6 1374 2806 1349 3267 3752 3752 1 ALSSQHQAR Unmodified 996.51009 0.51009098 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 8.33 1.97 1 1 1 1 1 1 20.379 20.379 3 2.785E-13 3356 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 177.7 112.45 47.698 57.468 61.46 24.902 80.742 58.637 45 58 61 25 80 57 3 5 4 2 4 4 10337 1375 1419 1350 3268;3269;3270;3271;3272;3273 3753;3754;3755;3756;3757;3758 3758 6 ALSTGEK Unmodified 704.37047 0.37046918 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 8.5 2.83 1 1 2 1 1 2 38.464 38.464 2;3 1.4511E-05 9202 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 162.31 47.72 2592 1878.2 2723.1 2431 2916.2 3201.1 2437 1908 2703 2401 2993 3081 7 7 8 6 7 9 1167000 1376 1404 1351 3274;3275;3276;3277;3278;3279;3280;3281 3759;3760;3761;3762;3763;3764;3765;3766;3767;3768 3762 10 ALTAHLYSLLQTQHALGDAFADLSQK Unmodified 2811.4555 0.45554279 260 A0A1B0GS63;Q8K221;D3Z2F3 Arfip2 Arfaptin-2 yes no 0 0 0 0 11 0 1 87.189 87.189 4 0.050449 27699 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 24.068 9.4548 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 2091.7 1377 260 1352 3282 3769 3769 1 ALTALFK Unmodified 762.46398 0.46397563 1476 P28658 Atxn10 Ataxin-10 yes yes 0 0 0 0 8 4.97 1 1 1 71.429 71.429 2 0.0053384 18292 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 134.44 67.403 672.68 535.48 642.69 660.3 1197.6 1038.2 633 556 654 655 1208 1006 2 2 2 2 3 3 104700 1378 1476 1353 3283;3284;3285 3770;3771;3772 3772 3 ALTASPPAAR Unmodified 953.52943 0.52942943 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 7 0 1 39.717 39.717 2 0.0084275 9755 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.27 25.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1379 732 1354 3286 3773 3773 1 ALTDEQEEQAAR Unmodified 1359.6266 0.62663688 2303 Q80TL4;F6SBE4 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 1.33 0.471 2 1 37.744 37.744 2;3 6.911E-33 10115 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 187.31 134.22 176.52 123.67 184.64 186.28 261.48 37.062 166 130 186 185 259 37 3 3 4 4 3 1 154690 1380 2303 1355 3287;3288;3289 3774;3775;3776;3777 3775 4 ALTDGTGFITLRSSNK Deamidation (N) 1680.8683 0.86826413 3443 yes yes 0 1 0 1 8 0 1 83.057 83.057 3 0.028553 29468 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.184 12.633 0 168.11 0 180.2 240.15 197.82 0 158 0 169 244 192 0 1 0 1 1 1 23507 + 1381 3443 1356 3290 3778 3778 1156 1 ALTGGIAHLFK Unmodified 1126.6499 0.64987892 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 66.788 66.788 3 1.943E-08 16430 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.69 53.253 555.54 506.28 583.04 868.71 1248.4 821.85 522 503 578 828 1255 791 5 4 4 5 6 4 406820 1382 1164 1357 3291;3292;3293;3294;3295 3779;3780;3781;3782;3783;3784;3785;3786 3784 8 ALTLFQNINNCLK Unmodified 1547.813 0.81299786 3029 Q9D0L7 Armc10 Armadillo repeat-containing protein 10 yes yes 0 0 0 0 12 0 1 80.6 80.6 3 0.0054562 22066 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.627 28.674 0 29.792 0 0 0 49.036 0 28 0 0 0 46 0 1 0 0 0 1 5476 1383 3029 1358 3296 3787 3787 1 ALTLGALTLPLAR Unmodified 1308.8129 0.8129215 325 A0A1W2P784;Q3U7R1 Esyt1 Extended synaptotagmin-1 yes no 0 0 0 0 6.5 5.5 1 1 85.058 85.058 2;3 7.2874E-05 23751 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.766 61.268 0 29.464 19.617 8.6678 19.874 20.254 0 28 19 9 19 19 0 2 1 1 1 1 3563.6 1384 325 1359 3297;3298 3788;3789 3789 2 ALTLIAGSPLK Unmodified 1082.6699 0.66994566 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9.25 4.82 1 1 1 1 73.121 73.121 3 2.1644E-09 19011 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.25 98.044 197.89 291.33 182.97 89.35 436.13 269.42 186 287 177 84 435 260 4 5 4 2 6 4 139370 1385 2264 1360 3299;3300;3301;3302 3790;3791;3792;3793;3794;3795;3796 3795 7 ALTLLDYLLK Unmodified 1161.7009 0.70091144 2750 Q91W69 Epn3 Epsin-3 yes yes 0 0 0 0 11.5 0.5 1 1 98.28 98.28 2 4.871E-05 28032 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.5 0 20.276 22.041 0 91.547 14.066 89.143 19 22 0 84 15 84 1 1 0 2 1 2 13619 1386 2750 1361 3303;3304 3797;3798 3798 2 ALTNLPHTDFTLCK Unmodified 1629.8185 0.81847717 3133 Q9DBZ5;Q3TY56 Eif3k Eukaryotic translation initiation factor 3 subunit K yes no 0 0 0 0 8 0 1 65.899 65.899 3 0.0050922 21421 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.177 32.912 0 0 46.731 68.26 0 49.036 0 0 46 65 0 46 0 0 1 1 0 1 5557.2 1387 3133 1362 3305 3799 3799 1 ALTPLQEEMAGLLQQIEVER Unmodified 2267.1831 0.18313268 3175 Q9EQI8 Mrpl46 39S ribosomal protein L46, mitochondrial yes yes 0 0 0 0 6 0 1 101.63 101.63 3 0.005992 37425 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.188 21.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 742.72 1388 3175 1363 3306 3800 3800 1 ALTPQTAETDAIR Unmodified 1385.7151 0.71505795 348 A0A217FL60;A0A1Y7VN36;Q8K0G5 Tssc1 Protein TSSC1 yes no 0 0 0 0 4.67 0.471 1 2 51.092 51.092 2;3 0.00040244 16522 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.23 43.719 40.631 28.427 0 41.057 25.377 58.972 38 28 0 38 28 56 2 1 0 2 2 2 4967.9 1389 348 1364 3307;3308;3309 3801;3802;3803 3802 3 ALTQPLGLLR Unmodified 1080.6655 0.66552898 1205 O35682;A0A0N4SW94 Myadm Myeloid-associated differentiation marker yes no 0 0 0 0 10 0 1 69.518 69.518 2 0.036857 20262 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.235 0.70964 98.011 138.25 181.64 0 160.69 163.84 93 139 176 0 159 158 1 1 1 0 1 1 12786 1390 1205 1365 3310 3804 3804 1 ALTSVVNYR Unmodified 1021.5556 0.55564418 3064 Q9D4H8;E0CYT5 Cul2 Cullin-2 yes no 0 0 0 0 9 0 1 53.921 53.921 2 0.013738 14956 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.69 33.531 78.281 91.825 110.55 81.908 118.14 105.36 74 93 111 83 120 102 1 1 1 1 1 1 5088.1 1391 3064 1366 3311 3805 3805 1 ALTSVVNYREPK Unmodified 1375.746 0.74596415 3064 Q9D4H8;E0CYT5 Cul2 Cullin-2 yes no 0 0 0 1 8 0 1 52.075 52.075 3 0.063192 14853 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.28 20.435 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1392 3064 1367 3312 3806 3806 1 ALTTQLIEQTK Unmodified 1244.6976 0.69761697 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 7.5 0.5 1 1 63.276 63.276 2;3 2.1725E-08 20103 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.1 96.301 69.093 37.355 77.883 44.604 83.187 76.51 65 37 74 46 84 74 2 1 1 1 2 2 8987.1 1393 145 1368 3313;3314 3807;3808 3808 2 ALTVPELTQQMFDAK Unmodified 1690.86 0.86000763 1795;3072;3183;2805 P68372;Q922F4;Q9D6F9;Q9ERD7 Tubb4b;Tubb6;Tubb4a;Tubb3 Tubulin beta-4B chain;Tubulin beta-6 chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 9.57 2.35 1 2 3 2 1 1 1 3 84.205 84.205 2;3;4 3.763E-42 30576 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 183.06 153.26 2077.9 1832 1753.6 2226.6 2475.5 2413.1 1952 1875 1759 2159 2538 2321 13 15 10 13 15 11 860720 1394 1795;2805;3072;3183 1369 3315;3316;3317;3318;3319;3320;3321;3322;3323;3324;3325;3326;3327;3328 3809;3810;3811;3812;3813;3814;3815;3816;3817;3818;3819;3820;3821;3822;3823;3824;3825;3826;3827;3828;3829 3811 21 ALTVPELTQQMFDAK Oxidation (M) 1706.8549 0.85492225 1795;3072;3183;2805 P68372;Q922F4;Q9D6F9;Q9ERD7 Tubb4b;Tubb6;Tubb4a;Tubb3 Tubulin beta-4B chain;Tubulin beta-6 chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 0 8.4 1.36 1 3 1 80.944 80.944 3;4 0.0013934 29918 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.804 25.977 196.31 172.75 366.79 343.19 145.34 313.48 185 177 361 334 148 297 5 4 6 6 3 6 43241 1395 1795;2805;3072;3183 1369 3329;3330;3331;3332;3333 3830;3831;3832;3833;3834;3835;3836 3835 145 7 ALTVPELTQQMFDSK Unmodified 1706.8549 0.85492225 2283;2975 Q7TMM9;Q9CWF2 Tubb2a;Tubb2b Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 9.1 3.45 1 2 1 1 1 1 1 2 83.634 83.634 2;3;4 4.1443E-82 30391 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 216.83 47.663 2158.3 1501.8 2548.7 1918.2 2332.2 2549.2 2031 1580 2513 1926 2386 2447 10 11 10 10 11 9 663850 1396 2283;2975 1370 3334;3335;3336;3337;3338;3339;3340;3341;3342;3343 3837;3838;3839;3840;3841;3842;3843;3844;3845;3846;3847;3848;3849;3850;3851;3852 3839 16 ALTVPELTQQMFDSK Oxidation (M) 1722.8498 0.84983687 2283;2975 Q7TMM9;Q9CWF2 Tubb2a;Tubb2b Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 1 0 8 0.603 2 7 2 77.859 77.859 3 5.1646E-12 24654 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.62 111.21 455.91 230.72 282.91 324.67 438.42 453.89 427 233 268 306 437 435 9 6 5 7 8 8 54737 1397 2283;2975 1370 3344;3345;3346;3347;3348;3349;3350;3351;3352;3353;3354 3853;3854;3855;3856;3857;3858;3859;3860;3861;3862;3863;3864;3865;3866 3853 171 14 ALTVPELTQQVFDAK Unmodified 1658.8879 0.88793694 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 0 0 9 2.48 2 1 4 2 3 83.056 83.056 2;3;4 1.6059E-33 28688 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 170.26 144.94 1027.4 1127.1 1058.8 948.71 1050.2 1444.1 965 1139 1069 929 1081 1380 11 14 10 10 13 12 591020 1398 1863 1371 3355;3356;3357;3358;3359;3360;3361;3362;3363;3364;3365;3366 3867;3868;3869;3870;3871;3872;3873;3874;3875;3876;3877;3878;3879;3880;3881;3882;3883;3884 3878 18 ALTYFVALPGVGVSMLNVFLK Unmodified 2238.2486 0.24863347 1545 Q9DCW5;P43024 Cox6a1 Cytochrome c oxidase subunit 6A, mitochondrial;Cytochrome c oxidase subunit 6A1, mitochondrial yes no 0 0 0 0 13 0 2 117.68 117.68 3 7.9192E-06 45167 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.763 38.481 0 9.576 6.492 0 0 19.188 0 9 6 0 0 18 0 1 1 0 0 2 1845.6 1399 1545 1372 3367;3368 3885;3886 3886 2 ALTYLLLQPPSPK Unmodified 1439.8388 0.8388019 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 4.67 5.19 2 1 83.558 83.558 3 1.1344E-07 29085 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.43 67.269 390.4 254.61 324.48 197.88 128.88 373.7 367 266 318 191 128 353 9 7 7 5 3 8 34058 1400 2790 1373 3369;3370;3371 3887;3888;3889;3890;3891;3892;3893;3894;3895;3896;3897 3888 11 ALVADSHPESER Unmodified 1309.6262 0.62624295 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 4.5 1.12 1 1 1 1 33.715 33.715 3 3.9297E-21 9100 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.74 124.88 337.02 143.04 223.05 249.13 398.8 234.94 316 148 218 241 399 227 7 4 3 4 6 4 82635 1401 2148 1374 3372;3373;3374;3375 3898;3899;3900;3901;3902;3903;3904 3898 7 ALVAVGEVCQDYDSDKR Unmodified 1923.8996 0.89964061 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 1 6 0 1 58.605 58.605 3 0.0026352 19440 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.188 29.472 40.584 37.695 0 20.252 27.359 29.067 38 38 0 19 28 28 1 1 0 1 1 1 2280.5 1402 1896 1375 3376 3905 3905 1 ALVAYYQK Unmodified 954.51747 0.51746776 1372 P14131 Rps16 40S ribosomal protein S16 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 57.361 57.361 2 0.00012765 14913 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 159.14 99.936 257.67 70.729 95.871 212.99 226.82 193.25 241 74 93 204 227 185 3 1 1 3 2 2 29832 1403 1372 1376 3377;3378;3379;3380 3906;3907;3908;3909 3906 4 ALVDELEWEIAR Unmodified 1442.7405 0.74054442 323 A0A1W2P729;Q9QXT0 Cnpy2 Protein canopy homolog 2 yes no 0 0 0 0 4 0 1 85.556 85.556 3 0.013257 32500 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.433 29.542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 627.28 1404 323 1377 3381 3910 3910 1 ALVDHENVISCPHLGASTK Unmodified 2047.0157 0.015673424 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 6 0 1 51.927 51.927 4 5.9215E-14 16252 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.55 86.584 182.09 107.7 142.46 134.07 207.39 147.59 171 115 144 134 209 144 2 2 2 2 2 2 11402 1405 2138 1378 3382 3911;3912 3912 2 ALVEDTK Unmodified 774.41233 0.41233399 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 5 0 1 45.825 45.825 2 0.026973 13978 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.55 22.518 59.002 142.89 61.459 0 123.26 65.773 56 139 65 0 120 65 1 1 1 0 1 1 4255.5 1406 287 1379 3383 3913 3913 1 ALVFQPVTELK Unmodified 1243.7176 0.71762413 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 9.8 1.72 1 2 1 1 74.992 74.992 2;3 6.9413E-17 24937 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 169.76 116.08 286.98 137.27 202.03 258.94 321.44 300.53 269 139 199 250 325 288 3 2 3 3 3 3 107330 1407 1568 1380 3384;3385;3386;3387;3388 3914;3915;3916;3917;3918 3916 5 ALVFQPVTELKDQTDFEHR Unmodified 2272.1488 0.14879609 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 1 8 0 1 70.39 70.39 4 0.00026849 23512 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.487 41.957 78.148 110.88 116.85 133.41 91.15 0 74 111 120 130 93 0 1 1 1 1 1 0 17150 1408 1568 1381 3389 3919 3919 1 ALVGDEAELPCR Unmodified 1328.6395 0.63945017 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 6.25 3.96 1 1 1 1 54.979 54.979 2;3 2.5612E-23 18691 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 169.76 120.97 128.93 115.49 246.81 206.71 82.713 216.42 121 112 241 204 83 204 3 2 3 5 2 3 96312 1409 2014 1382 3390;3391;3392;3393 3920;3921;3922;3923;3924 3921 5 ALVGGAVGGLAGAASK Unmodified 1297.7354 0.73539946 2048 Q5H8C4;A0A286YCC3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 10 0 1 63.717 63.717 3 2.3555E-05 17624 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.692 59.31 60.088 0 0 60.115 0 69.29 56 0 0 55 0 65 1 0 0 1 0 1 4169.3 1410 2048 1383 3394 3925 3925 1 ALVILAK Unmodified 726.50036 0.50036114 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 9.8 4.45 1 1 2 1 66.697 66.697 2;3 0.0053222 16508 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.26 51.717 897.7 1405.9 720.08 1029.3 605.6 1283 844 1403 711 984 609 1219 6 8 5 7 6 8 1088900 1411 2868 1384 3395;3396;3397;3398;3399 3926;3927;3928;3929;3930;3931;3932;3933;3934;3935 3932 10 ALVLAQIR Unmodified 882.56509 0.56508666 2296 Q7TT37 Ikbkap Elongator complex protein 1 yes yes 0 0 0 0 11 0 1 60.392 60.392 2 0.041645 15823 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.035 38.928 0 0 0 0 0 120 0 0 0 0 0 120 0 0 0 0 0 1 7207.2 1412 2296 1385 3400 3936 3936 1 ALVLDQDCTVLADQEVR Unmodified 1943.9622 0.96224087 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 4 0 1 69.218 69.218 3 7.1591E-07 24971 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.013 52.284 0 20.216 0 0 9.414 0 0 19 0 0 9 0 0 1 0 0 1 0 2810.6 1413 1854 1386 3401 3937 3937 1 ALVLELCCNDESGEDVEVPYVR Unmodified 2565.1727 0.17270393 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 4.75 0.829 2 1 1 81.659 81.659 3;4 2.5272E-16 30902 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.17 92.779 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 5956.5 1414 1876 1387 3402;3403;3404;3405 3938;3939;3940;3941 3940 4 ALVLPLK Unmodified 752.51601 0.5160112 3427 yes no 0 0 0 0 10.5 0.5 1 1 65.515 65.515 2 0.027399 18454 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.151 27.096 148.2 63.396 106.26 142.09 113.51 184.38 139 65 102 130 111 176 2 1 1 1 1 2 15351 + 1415 3427 1388 3406;3407 3942;3943 3942 2 ALVPALYK Unmodified 873.53239 0.53238955 2508 Q8C729;E0CZ67;A0A087WSI2 Fam126b Protein FAM126B yes no 0 0 0 0 12 1 1 1 66.132 66.132 2 0.01231 18264 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.903 45.292 0 157.47 0 0 216.52 0 0 148 0 0 207 0 0 1 0 0 1 0 19752 1416 2508 1389 3408;3409 3944;3945 3944 2 ALVPTPGK Unmodified 781.46979 0.46978929 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 8 0 1 51.909 51.909 2 0.025299 14767 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.109 29.391 0 86.624 100.97 94.18 77.149 155.57 0 83 102 93 83 148 0 1 1 1 1 1 4838.6 1417 1333 1390 3410 3946 3946 1 ALVPTPGKK Unmodified 909.56475 0.56475231 1333 P09405 Ncl Nucleolin yes yes 0 0 0 1 10.5 0.5 1 1 46.942 46.942 3 0.010022 10522 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.347 46.602 240.37 239.94 644.45 290.58 248.15 334.72 227 246 622 287 250 314 1 1 2 1 1 1 43253 1418 1333 1391 3411;3412 3947;3948 3947 2 ALVQSLLAK Unmodified 941.59097 0.59096706 2533 Q8CG72 Adprhl2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 0 1 0 1 73.121 73.121 2 9.4451E-06 24846 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 152.34 74.592 94.788 25.717 97.341 76.962 74.318 37.321 89 28 95 77 74 37 2 1 2 2 1 1 19465 1419 2533 1392 3413 3949;3950 3949 2 ALVSAQWVAEALK Unmodified 1384.7715 0.77145062 2826 Q99J99;A0A2R8VHT1;A0A2R8VHE5 Mpst 3-mercaptopyruvate sulfurtransferase yes no 0 0 0 0 11 0 1 84.652 84.652 3 0.0024075 26492 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.034 29.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6117.3 1420 2826 1393 3414 3951 3951 1 ALVSEWKEPQGK Unmodified 1370.7194 0.71941505 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 1 8.5 0.5 1 1 56.422 56.422 3 0.0006544 16132 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.951 42.562 256.35 112.44 282.25 65.891 187.77 297.39 241 120 271 65 187 284 2 1 2 1 1 2 12933 1421 1955 1394 3415;3416 3952;3953 3953 2 ALVSQLHER Unmodified 1051.5774 0.57744226 1993 Q3ULD5 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 0 0 8 0 1 39.244 39.244 3 0.016374 8859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.978 25.084 68.994 63.296 72.512 76.56 0 59.696 65 65 74 74 0 56 1 1 1 1 0 1 2560.3 1422 1993 1395 3417 3954 3954 1 ALVSSVR Unmodified 730.43374 0.43373813 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 10.7 1.7 1 1 1 40.051 40.051 2 0.019949 11338 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.22 46.099 711.45 869.97 335.37 588.2 439.49 71.495 669 868 345 564 435 69 3 3 2 3 2 1 135300 1423 1321 1396 3418;3419;3420 3955;3956;3957 3957 3 ALVSYDGLNQR Unmodified 1234.6306 0.63060004 2870 Q99M71 Epdr1 Mammalian ependymin-related protein 1 yes yes 0 0 0 0 9.75 3.27 1 1 2 54.946 54.946 2;3 3.3432E-05 17826 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.97 77.342 167.04 143.69 271.61 232.88 239.87 162.15 157 148 268 232 241 157 3 3 3 4 3 2 26036 1424 2870 1397 3421;3422;3423;3424 3958;3959;3960;3961 3958 4 ALVTGYFMQVAHLER Unmodified 1733.8923 0.89231081 1185 O35286 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes yes 0 0 0 0 11.5 0.5 1 1 76.047 76.047 3 7.5088E-05 20202 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.441 72.608 30.044 0 0 40.441 0 49.036 28 0 0 37 0 46 1 0 0 1 0 1 4625.7 1425 1185 1398 3425;3426 3962;3963 3963 2 ALVTLLDAK Unmodified 942.57498 0.57498264 2535 Q8CGA0 Ppm1f Protein phosphatase 1F yes yes 0 0 0 0 10.5 0.5 1 1 75.725 75.725 2 0.010811 22500 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.376 31.35 128.81 128.58 63.188 67.279 86.818 59.696 121 130 65 65 83 56 2 2 1 1 1 1 11064 1426 2535 1399 3427;3428 3964;3965 3965 2 ALVTNKPVVSALHGAVPGR Unmodified 1885.0898 0.089765066 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 1 8 4.97 1 1 1 55.685 55.685 4 8.4249E-58 12333 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 176.42 157.34 226.49 128.65 237.77 248.59 221.24 178.82 213 139 232 241 227 171 2 2 2 2 2 2 50123 1427 1089 1400 3429;3430;3431 3966;3967;3968 3968 3 ALVYGNHGDPAK Unmodified 1240.62 0.62003536 3150 Q9DCS3;A2A845 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes no 0 0 0 0 13 0 1 41.433 41.433 3 0.0025441 12151 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.7 25.372 78.252 111.17 99.125 93.707 108.17 105.65 74 111 102 93 111 102 1 1 1 1 1 1 5228.4 1428 3150 1401 3432 3969 3969 1 ALWEDEGVR Unmodified 1073.5142 0.5141733 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 4.5 0.5 1 1 56.128 56.128 2 0.0012379 18862 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.44 62.561 108.2 79.695 142.67 53.831 188.53 103.35 102 84 139 56 186 102 2 2 2 1 2 2 12968 1429 1772 1402 3433;3434 3970;3971 3971 2 ALWEDSGIQNAYDR Unmodified 1636.7481 0.74814899 1465 P27601;Q9D034 Gna13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 0 5.5 0.5 1 1 65.637 65.637 2;3 0.0046474 23342 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.435 34.649 69.32 54.487 25.282 59.227 53.858 58.159 65 56 28 56 56 56 2 2 1 1 2 2 4523.6 1430 1465 1403 3435;3436 3972;3973 3972 2 ALWFQGR Unmodified 876.46062 0.46062159 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 11.5 0.5 1 1 61.629 61.629 2 0.0058371 14845 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 138.61 40.098 636.8 116.78 176.28 162.38 222.32 913.61 595 125 177 162 225 863 2 1 1 1 1 2 77336 1431 2602 1404 3437;3438 3974;3975 3975 2 ALWHFSCDVADGK Unmodified 1504.6769 0.67689831 1028 F8VPN4;A0A0G2JGI9 Agl yes no 0 0 0 0 8 0 1 64.047 64.047 3 0.001014 20521 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.375 42.963 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 2990 1432 1028 1405 3439 3976 3976 1 ALYALPQAFFK Unmodified 1267.6965 0.69649476 2022 Q3V3N7 Bbs1 yes yes 0 0 0 0 12 0 1 85.313 85.313 2 0.0027543 23931 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.282 46.712 0 29.792 0 0 29.288 0 0 28 0 0 28 0 0 1 0 0 1 0 862.58 1433 2022 1406 3440 3977 3977 1 ALYATLQAAAK Unmodified 1119.6288 0.62880913 1087 G3X9N3 Pnmal2 yes yes 0 0 0 0 12 0 1 65.629 65.629 3 0.0014976 16157 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.353 32.61 0 0 49.772 0 104.41 66.31 0 0 46 0 102 65 0 0 1 0 1 1 3650.9 1434 1087 1407 3441 3978 3978 1 ALYDFEPENEGELGFK Unmodified 1856.8469 0.84685999 491 A2ALV3;Q62420 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 6.6 3.26 1 2 1 1 79.878 79.878 3 4.6941E-33 30317 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.12 124.02 304.17 408.17 401.74 150.22 347.41 513.49 288 408 397 150 353 491 4 5 3 1 3 4 212800 1435 491 1408 3442;3443;3444;3445;3446 3979;3980;3981;3982;3983;3984 3984 6 ALYDTFSAFGNILSCK Unmodified 1805.8658 0.86582129 1484;549 P29341;Q62029;Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9;V9GXG3 Pabpc1;Pabpc2;Pabpc4 Polyadenylate-binding protein 1;Polyadenylate-binding protein no no 0 0 0 0 11.7 0.471 1 2 96.542 96.542 3;4 8.7238E-08 27617 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.35 89.394 72.358 19.729 29.112 0 97.278 29.848 69 19 28 0 93 28 2 1 1 0 1 1 26135 1436 1484;549 1409 3447;3448;3449 3985;3986;3987 3986 3 ALYDYAGQEADELSFR Unmodified 1846.8374 0.83735793 2828 Q99JB8;F6W8Y8 Pacsin3 Protein kinase C and casein kinase II substrate protein 3 yes no 0 0 0 0 4 0 1 74.618 74.618 3 0.063857 27471 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 29.618 11.701 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 1482 1437 2828 1410 3450 3988 3988 1 ALYDYDGQEQDELSFK Unmodified 1919.8425 0.84250289 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 7 3.82 2 3 2 72.44 72.44 2;3;4 1.1271E-25 26386 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.17 84.708 78.617 55.185 178.97 222.14 0 256.91 74 56 176 213 0 241 2 2 3 4 0 3 95695 1438 2133 1411 3451;3452;3453;3454;3455;3456;3457 3989;3990;3991;3992;3993;3994;3995 3993 7 ALYEALDLQSAFFK Unmodified 1614.8294 0.82935943 2789 Q920E5;A0A0G2JEA5;A0A0G2JE82 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 10 1.87 1 1 1 1 93.859 93.859 3 9.6064E-05 33466 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.963 50.582 44.332 70.428 82.596 60.288 35.347 62.951 42 70 84 60 37 60 2 2 3 3 1 2 14234 1439 2789 1412 3458;3459;3460;3461 3996;3997;3998;3999 3997 4 ALYEQEIR Unmodified 1020.524 0.52400971 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 7.33 4.03 1 1 1 48.026 48.026 2;3 0.0038978 15129 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.324 41.17 343.21 309.21 486.18 398.57 164.48 384.15 323 320 482 394 167 362 2 4 3 4 3 2 109510 1440 1329 1413 3462;3463;3464 4000;4001;4002;4003 4002 4 ALYEQSLHIK Unmodified 1200.6503 0.65027285 1692 P61202 Cops2 COP9 signalosome complex subunit 2 yes yes 0 0 0 0 8 0 1 54.937 54.937 3 0.0016452 16121 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.893 47.02 0 0 97.358 73.35 91.949 57.072 0 0 93 74 93 56 0 0 1 1 1 1 11008 1441 1692 1414 3465 4004 4004 1 ALYESEENCEVDPIK Unmodified 1794.7982 0.79819523 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 4 0.816 1 1 1 61.886 61.886 3 6.5299E-08 22112 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.72 101.1 69.262 57.301 93.968 64.435 132.34 19.706 65 56 93 65 130 19 2 2 3 2 3 1 14948 1442 992 1415 3466;3467;3468 4005;4006;4007 4005 3 ALYETELADAR Unmodified 1250.6143 0.61428128 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 4.5 0.5 1 1 56.567 56.567 2;3 5.3439E-05 19381 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.015 62.093 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 2192.9 1443 1379 1416 3469;3470 4008;4009 4008 2 ALYEYLTAK Unmodified 1070.5648 0.56481189 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 72.44 72.44 2;3 0.0011455 21679 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.52 74.148 39.414 56.926 0 60.115 0 59.696 37 56 0 55 0 56 1 1 0 1 0 1 5623.8 1444 2235 1417 3471;3472 4010;4011 4010 2 ALYGDTLVTGFAR Unmodified 1382.7194 0.71941505 1993 Q3ULD5;Q6PD20 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 8 0 1 70.98 70.98 3 0.019138 23793 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.382 20.465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1445 1993 1418 3473 4012 4012 1 ALYLIATNGTPELQNPEK Deamidation (N) 1972.0153 0.015322298 1099;2556 Q8CIN4;G5E884;O88643 Pak2;Pak1 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 no no 0 1 0 0 8.67 3.09 1 1 1 77.22 77.22 3 4.2948E-09 29393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.506 60 0 28.971 49.116 0 38.761 28.742 0 28 47 0 38 28 0 1 1 0 1 1 6794.3 1446 2556;1099 1419 3474;3475;3476 4013;4014;4015 4015 289 3 ALYLIATNGTPELQNPEK Unmodified 1971.0313 0.031306714 1099;2556 Q8CIN4;G5E884;O88643 Pak2;Pak1 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 no no 0 0 0 0 8 0 1 75.401 75.401 3 0.0054763 25862 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.856 29.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1447 2556;1099 1419 3477 4016 4016 1 ALYLIATNGTPELQNPER Deamidation (N) 2000.0215 0.021470309 2106 Q61036 Pak3 Serine/threonine-protein kinase PAK 3 yes yes 0 1 0 0 7 0 1 75.236 75.236 3 6.4161E-13 26293 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.31 105.68 39.357 36.262 27.069 19.154 0 39.442 37 37 28 19 0 37 1 1 1 1 0 1 4506.8 1448 2106 1420 3478 4017 4017 818 1 ALYNSIK Unmodified 807.44905 0.44905385 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 9 0 2 52.711 52.711 2;3 0.0064941 14372 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.801 41.692 89.059 88.312 0 101.65 81.809 145.84 83 83 0 93 83 139 1 1 0 1 1 1 24901 1449 814 1421 3479;3480 4018;4019 4019 2 ALYQLAQK Unmodified 933.52837 0.5283668 839 Q8C0C7;E9PWY9 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 0 10.5 0.5 2 2 58.896 58.896 2;3 0.0011629 15626 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.44 45.703 217.46 27.776 285.45 144.23 44.29 206.61 204 28 269 139 46 195 3 1 3 3 1 3 26043 1450 839 1422 3481;3482;3483;3484 4020;4021;4022;4023 4020 4 ALYSLGSK Unmodified 837.45962 0.45961853 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 0 10 0.816 1 1 1 56.671 56.671 2 0.0015969 14116 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.71 56.426 187.63 89.5 128.86 233.7 125.28 135.01 176 93 130 223 130 130 2 1 1 2 1 1 15279 1451 1625 1423 3485;3486;3487 4024;4025;4026 4026 3 ALYSTAMESIQGGAAR Unmodified 1624.7879 0.78790532 1044 F8WHW6;O70161;F7C0X9 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 9 0 1 64.683 64.683 3 0.00017936 20093 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.059 36.254 0 57.781 44.212 46.994 34.527 58.711 0 55 46 46 37 56 0 1 1 1 1 1 5335.9 1452 1044 1424 3488 4027 4027 1 ALYTLVNK Unmodified 920.53312 0.53311783 414 A0A338P7I7;Q8BK72 Mrps27 28S ribosomal protein S27, mitochondrial yes no 0 0 0 0 11 0 1 64.407 64.407 2 0.006018 17507 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.942 37.254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1453 414 1425 3489 4028 4028 1 ALYYLQIHPQELR Unmodified 1642.8831 0.88312633 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 10 0.816 1 1 1 65.864 65.864 3 0.00046796 18580 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.234 34.006 0 146.35 92.362 215.19 179.1 282.25 0 139 93 205 186 277 0 2 1 2 2 3 36897 1454 1955 1426 3490;3491;3492 4029;4030;4031 4030 3 ALYYWNNEYIMSLISDNAAK Unmodified 2378.1253 0.12528345 2102 Q60996 Ppp2r5c Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 0 11 0 1 97.477 97.477 3 0.0010746 31938 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.12 29.288 0 0 9.5198 4.8976 0 0 0 0 9 5 0 0 0 0 1 1 0 0 863.49 1455 2102 1427 3493 4032 4032 1 ALYYWNNEYIMSLISDNAAR Unmodified 2406.1314 0.13143146 2733 Q91V89 Ppp2r5d yes yes 0 0 0 0 10.5 0.5 1 1 96.732 96.732 3 0.00012059 31647 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.819 41.185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1456 2733 1428 3494;3495 4033;4034 4033 2 AMADPEVQQIMSDPAMR Unmodified 1888.8481 0.84813909 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 4 0 1 69.788 69.788 3 0.050127 25218 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.536 11.703 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 1825.1 1457 2092 1429 3496 4035 4035 1 AMAQNAIK Unmodified 845.44292 0.44292261 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2S7 Celf2 CUGBP Elav-like family member 2 yes no 0 0 0 0 8 0 1 43.394 43.394 2 0.016447 10782 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.784 32.437 29.825 0 36.817 68.851 0 49.036 28 0 37 65 0 46 1 0 1 1 0 1 2252.2 1458 220 1430 3497 4036 4036 1 AMDEERFDEAIQLR Unmodified 1721.8043 0.80428367 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 1 3 0 1 61.274 61.274 3 0.0001356 21738 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.24 46.278 59.464 24.374 84.261 84.916 41.547 77.698 56 28 83 83 46 74 1 1 1 1 1 1 6499.1 1459 1357 1431 3498 4037 4037 1 AMDTLGVEYGDK Unmodified 1297.586 0.58601761 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 5 0 2 61.723 61.723 2;3 0.00042644 21479 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.252 43.647 79.805 82.728 75.801 77.444 110.23 135.43 75 84 74 74 111 130 2 3 2 2 2 3 7652.3 1460 1411 1432 3499;3500 4038;4039;4040 4038 3 AMDTLGVEYGDKER Unmodified 1582.7297 0.72972174 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 1 7 3.54 1 1 1 1 53.768 53.768 3;4 1.0477E-10 17172 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.16 95.36 976.62 603.01 421.92 1051.2 886.14 994.88 921 630 423 1000 926 957 4 3 2 3 3 3 132790 1461 1411 1433 3501;3502;3503;3504 4041;4042;4043;4044 4043 4 AMDVYQK Unmodified 853.40039 0.4003891 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 7 0 1 48.845 48.845 3 0.048696 13959 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.59 22.988 59.282 63.802 81.367 96.8 0 0 56 65 83 93 0 0 1 1 1 1 0 0 6286.2 1462 2092 1434 3505 4045 4045 1 AMEAVAAQGK Unmodified 974.48552 0.48551571 3126;1246 O70250;Q9DBJ1 Pgam2;Pgam1 Phosphoglycerate mutase 2;Phosphoglycerate mutase 1 no no 0 0 0 0 7.75 3.11 1 1 1 1 46.424 46.424 2;3 7.244E-09 14300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.34 85.309 379.87 297.09 490.38 145.92 384.64 122.34 358 311 475 145 372 116 3 4 3 3 3 2 58146 1463 1246;3126 1435 3506;3507;3508;3509 4046;4047;4048;4049;4050 4050 5 AMEGAGTDEK Unmodified 1007.423 0.42297503 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 38.65 38.65 2 0.020021 10934 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.676 23.868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1464 1050;1380 1436 3510 4051 4051 1 AMEVDERPTEQYSDIGGLDK Unmodified 2252.0267 0.026691621 463;14 A0A087WPH7;F6Q2E3;A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A no no 0 0 0 1 4 0 1 59.997 59.997 3 3.5162E-05 21045 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.936 39.858 69.745 0 0 40.441 0 29.848 65 0 0 37 0 28 1 0 0 1 0 1 2292.9 1465 14;463 1437 3511 4052 4052 1 AMEWISAK Unmodified 934.45824 0.45823833 2507 Q8C605;Q9WUA3;F6YL81 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 9 0 1 65.051 65.051 3 0.020083 20327 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.968 22.474 0 0 97.721 65.221 0 78.884 0 0 93 65 0 74 0 0 1 1 0 1 4100.5 1466 2507 1438 3512 4053 4053 1 AMGIGWWVR Unmodified 1074.5433 0.54330536 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 12 0 1 75.64 75.64 2 0.017826 19984 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.993 46.664 79.402 0 0 71.045 0 0 74 0 0 65 0 0 1 0 0 1 0 0 7273.3 1467 570 1439 3513 4054 4054 1 AMGIMNSFVNDIFER Deamidation (N) 1743.796 0.79602716 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 1 0 0 7 0 1 89.787 89.787 3 9.2306E-11 33238 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.08 91.433 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 2343.8 1468 1349;1350;2541 1440 3514 4055 4055 419 1 AMGIMNSFVNDIFER Unmodified 1742.812 0.81201158 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 0 9.75 1.56 2 2 2 1 1 94.943 94.943 2;3 1.0485E-25 37912 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 144.68 122.03 30.044 0 108.69 78.65 146.32 29.058 28 0 102 80 144 28 2 0 2 4 5 1 111140 1469 1349;1350;2541 1440 3515;3516;3517;3518;3519;3520;3521;3522 4056;4057;4058;4059;4060;4061;4062;4063;4064;4065 4065 10 AMGNLQIDFADPQR Unmodified 1574.7511 0.75112588 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 6 0 1 69.434 69.434 3 0.0014594 24462 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.29 35.484 78.898 33.102 56.58 36.55 27.609 0 74 37 56 37 28 0 1 1 1 1 1 0 3477.1 1470 1330 1441 3523 4066 4066 1 AMGPLVLTEVLFDEK Unmodified 1660.8746 0.87459506 1661 P59325 Eif5 Eukaryotic translation initiation factor 5 yes yes 0 0 0 0 8 0 1 100.42 100.42 3 0.0002393 35687 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.234 45.677 9.5959 12.121 0 0 12.125 12.446 9 12 0 0 12 12 1 1 0 0 1 1 818.44 1471 1661 1442 3524 4067 4067 1 AMHEASK Unmodified 772.35377 0.35377325 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 9.5 3.5 1 1 27.722 27.722 3 0.0043638 5008 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.45 67.427 54.02 59.058 68.167 60.064 77.241 76.68 51 60 69 60 79 74 1 1 1 1 1 1 3777.8 1472 1157;2210 1443 3525;3526 4068;4069 4068 2 AMIEVINHK Unmodified 1053.5641 0.56410038 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 52.918 52.918 3 0.0035784 15193 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.621 40.503 69.745 0 0 0 83.862 86.085 65 0 0 0 83 83 1 0 0 0 1 1 3767.1 1473 2178 1444 3527 4070 4070 1 AMLESIGVPLEK Unmodified 1285.6952 0.69517413 432 Q91WQ3;A2A7S7;F6VXZ2 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 8 0 1 76.133 76.133 3 0.0087733 26214 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.423 26.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1474 432 1445 3528 4071 4071 1 AMLSANIR Unmodified 874.46947 0.46947171 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6 3.56 1 1 1 48.686 48.686 2 0.010175 13221 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.299 34.82 20.232 194.4 171.94 223.77 284.37 192.03 19 185 179 219 288 187 1 1 2 2 2 1 46620 1475 2185 1446 3529;3530;3531 4072;4073;4074 4073 3 AMLSGPGQFAENETNEVNFR Unmodified 2210.0062 0.00623095 7 A0A087WQE6;A0A087WNT1;P83940 Tceb1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 0 6 0 1 68.938 68.938 3 1.1145E-10 24288 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.622 76.937 30.006 7.5527 0 0 27.961 38.644 28 9 0 0 28 37 1 1 0 0 1 1 3983.5 1476 7 1447 3532 4075 4075 1 AMLWVSEK Unmodified 962.48954 0.48953845 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 9 0 1 67.375 67.375 3 0.0098819 21365 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.486 27.542 39.701 0 0 0 0 59.696 37 0 0 0 0 56 1 0 0 0 0 1 2660.2 1477 1357 1448 3533 4076 4076 1 AMNGESLDGR Deamidation (N) 1049.4448 0.44477311 1291 O89086;Q8BG13 Rbm3 RNA-binding protein 3 yes no 0 1 0 0 2 0 1 42.053 42.053 2 0.00083362 12711 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.47 66.357 24.184 36.87 51.897 21.358 36.585 33.068 23 37 51 23 37 32 1 1 1 1 1 1 5713.3 1478 1291 1449 3534 4077 4077 351 1 AMNWMSGK Unmodified 923.39934 0.39934324 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 10 0 1 59.685 59.685 2 0.010452 15905 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.431 54.832 0 77.131 95.998 0 199.08 142.49 0 74 93 0 195 139 0 1 1 0 1 1 5290.7 1479 1568 1450 3535 4078 4078 1 AMQDAEVSK Unmodified 977.4488 0.44879585 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 7.33 4.03 1 1 1 43.503 43.503 2 0.001783 12840 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.048 50.2 104.68 44.372 77.16 0 46.477 47.71 102 46 74 0 46 46 2 1 1 0 1 1 7438.7 1480 1533 1451 3536;3537;3538 4079;4080;4081 4080 3 AMQGAGTQER Unmodified 1047.4767 0.47674194 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 4 0 1 27.269 27.269 2 0.0025251 5630 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.533 49.138 50.315 0 19.447 19.251 18.99 0 47 0 19 19 19 0 1 0 1 1 1 0 1186.5 1481 372 1452 3539 4082 4082 1 AMQNVLSGK Unmodified 946.4906 0.49060109 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 9.5 0.5 1 1 53.971 53.971 2 2.8922E-05 14994 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.7 81.045 108.33 78.987 185.83 83.517 0 118.33 102 83 185 83 0 111 1 1 2 1 0 1 20369 1482 2914 1453 3540;3541 4083;4084 4083 2 AMSTTSVTSSQPGK Unmodified 1380.6555 0.65549416 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7 0 1 44.026 44.026 3 0.00020608 11783 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.352 46.774 20.149 0 39.932 0 37.714 28.772 19 0 37 0 37 28 1 0 1 0 1 1 3115.9 1483 2154 1454 3542 4085 4085 1 AMTLMEYLIK Unmodified 1211.6294 0.62940275 2324 Q80VP1;D3Z4V3 Epn1 Epsin-1 yes no 0 0 0 0 11.3 1.25 1 1 1 90.808 90.808 2 4.9675E-08 29626 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.03 86.471 0 44.192 93.313 31.781 32.892 101.4 0 43 90 31 34 96 0 2 2 1 1 2 14775 1484 2324 1455 3543;3544;3545 4086;4087;4088 4086 3 AMTTFLSTLGAQCVIASR Unmodified 1925.9703 0.97030314 2912 Q9CQ62 Decr1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 85.439 85.439 3 1.6138E-13 30271 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.8 96.319 99.354 18.196 57.706 66.238 72.712 48.027 93 19 56 65 74 47 2 1 1 2 2 2 12451 1485 2912 1456 3546;3547 4089;4090 4089 2 AMVALIDVFHQYSGR Unmodified 1705.861 0.86101068 1591 P50114 S100b Protein S100-B yes yes 0 0 0 0 4.67 5.19 2 1 87.474 87.474 3 9.2928E-50 23700 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 194.51 158.23 134.86 37.084 25.099 102.67 115.86 155.67 126 38 24 97 117 149 5 2 2 4 3 4 56346 1486 1591 1457 3548;3549;3550 4091;4092;4093;4094;4095 4095 5 AMVNLQIQK Unmodified 1043.5798 0.57975044 2760 Q91WS0 Cisd1 CDGSH iron-sulfur domain-containing protein 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 61.204 61.204 2;3 3.242E-05 16092 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.68 96.433 69.745 0 40.034 0 133.58 134.74 65 0 37 0 130 134 1 0 1 0 2 3 26038 1487 2760 1458 3551;3552;3553;3554 4096;4097;4098;4099 4098 4 AMVQQWLEFR Unmodified 1306.6492 0.64922699 3044 Q9D1M4 Eef1e1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 0 10 0 1 78.242 78.242 2 0.012221 24178 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.283 28.905 49.128 45.631 0 70.028 54.058 37.899 46 46 0 65 56 37 1 1 0 1 1 1 2789.2 1488 3044 1459 3555 4100 4100 1 AMYDYSAQDEDEVSFR Unmodified 1924.7785 0.77852242 3134 Q9DC07;B7ZCI2 Nebl LIM zinc-binding domain-containing Nebulette yes no 0 0 0 0 3.5 0.5 1 1 62.518 62.518 3 2.4463E-05 22109 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.163 91.772 20.292 18.848 0 57.921 36.338 28.811 19 19 0 56 37 28 1 1 0 2 1 1 6750.9 1489 3134 1460 3556;3557 4101;4102 4102 2 AMYPDYFSK Unmodified 1120.4899 0.48993238 2932 Q9CQJ8 Ndufb9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 0 0 0 0 7.5 0.5 1 1 65.561 65.561 2;3 0.0041938 21132 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.816 36.718 147.98 74.907 132.39 68.11 53.816 86.942 139 74 130 65 56 83 2 1 2 1 1 2 8553.7 1490 2932 1461 3558;3559 4103;4104 4104 2 ANACNSVIK Unmodified 975.48076 0.48076468 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 7 0 1 41.562 41.562 2 0.0016431 10604 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.688 40.443 0 19.929 17.189 48.776 25.388 48.312 0 19 19 46 28 46 0 1 1 1 1 1 2492.5 1491 1242 1462 3560 4105 4105 1 ANADVEIITPR Unmodified 1197.6354 0.63535107 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 4 0 1 53.781 53.781 2 0.032793 18059 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.132 30.386 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 3612.9 1492 107 1463 3561 4106 4106 1 ANAGEESVMNLDK Unmodified 1376.6242 0.62419403 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 4.67 0.471 1 2 56.11 56.11 2;3 7.1318E-05 19221 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.76 56.87 29.635 94.7 134.83 0 77.404 29.848 28 93 130 0 74 28 1 2 2 0 1 1 9436 1493 2597 1464 3562;3563;3564 4107;4108;4109 4107 3 ANAGEESVMNLDK Oxidation (M) 1392.6191 0.61910866 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 1 0 4 0 1 47.828 47.828 3 0.042993 15233 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.843 31.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1494 2597 1464 3565 4110 4110 176 1 ANATEFGLASGVFTR Unmodified 1539.7682 0.76815616 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 8 0 1 70.283 70.283 2 0.0024678 23479 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.181 35.877 0 19.744 28.261 19.083 0 0 0 19 28 19 0 0 0 1 1 1 0 0 4797.1 1495 2633 1465 3566 4111 4111 1 ANCPHIVQFGSTDDPFLPWK Unmodified 2328.0997 0.099737405 1281 O88851 Rbbp9 Putative hydrolase RBBP9 yes yes 0 0 0 0 7 0 1 78.623 78.623 4 0.00061569 27972 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.704 28.825 39.307 36.123 35.569 47.122 55.111 37.869 37 37 37 46 56 37 1 1 1 1 1 1 2843.8 1496 1281 1466 3567 4112 4112 1 ANDDLADAGLEK Unmodified 1230.5728 0.57281039 601 B1AWT4;B1AWT2;B1AWT3;Q99K70;Q7TT45 Rragd;Rragc Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 0 3 0.816 1 1 1 55.829 55.829 3 7.4637E-05 19327 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.291 48.569 49.969 37.993 93.606 76.481 86.187 39.442 47 38 92 75 84 37 2 1 3 2 2 1 9583.5 1497 601 1467 3568;3569;3570 4113;4114;4115 4114 3 ANDDLLSEFPDK Unmodified 1362.6303 0.63032527 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 4 0.816 1 1 1 69.952 69.952 3 0.00021182 25887 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.219 49.147 60.088 0 24.04 68.43 62.858 87.75 56 0 23 65 65 84 2 0 1 2 2 3 23005 1498 407 1468 3571;3572;3573 4116;4117;4118 4116 3 ANDKLDTVLEK Unmodified 1244.6612 0.66123147 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 6 0 1 58.887 58.887 4 0.0015075 19543 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.153 39.672 0 39.368 0 60.425 41.647 107.54 0 37 0 56 46 102 0 1 0 1 1 1 1776.7 1499 1424 1469 3574 4119 4119 1 ANDPSLQEVNLNNIK Unmodified 1667.8479 0.84786304 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 0 7.75 3.11 1 1 1 1 64.99 64.99 3 2.2486E-07 23467 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.97 82.65 178.1 241.81 91.917 87.113 249.97 249.77 167 240 93 83 251 241 3 4 2 2 4 4 38391 1500 3232 1470 3575;3576;3577;3578 4120;4121;4122;4123 4123 4 ANDQFLESQR Unmodified 1206.5629 0.56291441 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 4 0 1 44.794 44.794 2 0.0015957 13810 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.827 59.641 0 0 30.296 0 19.874 0 0 0 28 0 19 0 0 0 1 0 1 0 2155.5 1501 1198 1471 3579 4124 4124 1 ANDTTFGLAAGVFTR Unmodified 1539.7682 0.76815616 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 8 0 1 73.186 73.186 2 0.00042068 24802 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.033 14.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1502 1958 1472 3580 4125 4125 1 ANEEIAQVR Unmodified 1028.5251 0.52507234 1033 F8VQ95;Q6Y685 Tacc1 Transforming acidic coiled-coil-containing protein 1 yes no 0 0 0 0 2.5 0.5 1 1 39.609 39.609 2 0.032535 11734 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.645 20.87 59.743 36.919 26.703 27.58 95.334 19.706 56 37 28 28 93 19 2 1 1 1 2 1 6307.2 1503 1033 1473 3581;3582 4126;4127 4126 2 ANEQLTDELAQK Unmodified 1358.6678 0.66777341 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 4 0 1 57.368 57.368 3 1.6985E-05 19728 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.547 65.741 0 39.368 0 30.604 0 0 0 37 0 28 0 0 0 1 0 1 0 0 6517.3 1504 1481 1474 3583 4128 4128 1 ANFENLAK Unmodified 905.46068 0.46068117 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 8.2 2.48 1 2 1 1 54.597 54.597 2;3 0.0087267 16785 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.88 32.083 475.87 411.29 641.44 537.88 446.98 724.92 448 417 640 528 455 692 4 4 5 4 4 5 55620 1505 2075 1475 3584;3585;3586;3587;3588 4129;4130;4131;4132;4133 4131 5 ANFQEIISALPFVK Unmodified 1575.8661 0.86607929 945 E9QAF9;Q0VGY8 Tanc1 Protein TANC1 yes no 0 0 0 0 11 0 1 95.991 95.991 3 0.005766 31285 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.774 25.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1506 945 1476 3589 4134 4134 1 ANFSLPEK Unmodified 904.46543 0.46543219 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 7.33 0.471 2 1 58.498 58.498 2;3 0.010402 18543 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.635 51.619 89.853 67.89 122.95 86.245 224.61 105.87 84 65 120 84 222 102 2 1 2 2 3 1 13027 1507 1873 1477 3590;3591;3592 4135;4136;4137 4136 3 ANFTPQETR Unmodified 1062.5094 0.50942227 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 8 3.56 1 1 1 39.055 39.055 2 0.0054012 10797 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.647 55.135 78.555 210.4 158.07 258.06 306.77 316.38 74 204 157 250 315 305 1 2 2 3 3 3 18351 1508 1019 1478 3593;3594;3595 4138;4139;4140 4138 3 ANFVPFIAVLK Unmodified 1217.7172 0.7172302 908 E9Q4K2;F6VT60;Q3V384 Lace1 Lactation elevated protein 1 yes no 0 0 0 0 1 0 1 90.403 90.403 2 0.0044802 32189 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.224 35.383 9.657 0 0 5.1941 14.405 0 9 0 0 5 14 0 1 0 0 1 1 0 1691.3 1509 908 1479 3596 4141 4141 1 ANGETSVGTVR Deamidation (N) 1090.5255 0.52546627 2619 Q8K596 Slc8a2 yes yes 0 1 0 0 2.67 0.471 1 2 36.043 36.043 2 0.00055165 9930 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 101.39 58.27 49.358 77.166 93.906 96.553 34.772 87.486 46 74 93 92 37 83 1 2 2 2 1 2 13445 1510 2619 1480 3597;3598;3599 4142;4143;4144 4142 952 3 ANGETSVGTVR Unmodified 1089.5415 0.54145068 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 4 0 1 32.501 32.501 2 0.0064643 7986 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.624 30.267 20.121 18.373 29.092 0 29.288 0 19 19 28 0 28 0 1 1 1 0 1 0 1513.7 1511 2619 1480 3600 4145 4145 1 ANGQENGHVK 2 Deamidation (N) 1054.468 0.46795139 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 2 0 0 3 0 1 29.754 29.754 3 0.064534 7177 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.474 27.439 127.66 88.511 109.65 101.06 206.64 122.02 120 93 111 102 206 120 1 1 1 1 1 1 8061.5 1512 1461 1481 3601 4146 4146 1 ANGQENGHVR Deamidation (N) 1081.4901 0.49008381 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 1 0 0 1 0 1 18.577 18.577 3 0.046559 2835 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.5 28.599 6.408 5.9519 0 9.837 0 0 6 6 0 9 0 0 1 1 0 1 0 0 488.39 1513 1480 1482 3602 4147 4147 548 1 ANGVLNTEDREEEIK Deamidation (N) 1716.8166 0.81662249 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 1 0 1 4 0 1 50.226 50.226 3 0.047188 16429 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.958 23.883 0 0 69.15 26.483 0 0 0 0 65 28 0 0 0 0 1 1 0 0 2389.8 1514 2249 1483 3603 4148 4148 890 1 ANHFLILFR Unmodified 1129.6396 0.63964859 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 0 12 0 1 66.138 66.138 3 0.0011327 16348 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.426 61.524 30.044 0 0 20.767 0 20.254 28 0 0 19 0 19 1 0 0 1 0 1 2996.6 1515 2320 1484 3604 4149 4149 1 ANHLDNVITIFK Unmodified 1383.751 0.75104953 2231 Q6PAK3 Prmt8 Protein arginine N-methyltransferase 8 yes yes 0 0 0 0 9 0 1 68.005 68.005 3 0.001269 21736 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.57 34.715 39.045 0 110.17 0 84.851 57.275 37 0 102 0 83 56 1 0 1 0 1 1 5646.2 1516 2231 1485 3605 4150 4150 1 ANHPMDAEVTK Unmodified 1211.5605 0.56047157 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 4 0 1 38.342 38.342 3 0.00054236 10795 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.185 53.58 0 0 89.806 0 0 49.036 0 0 83 0 0 46 0 0 1 0 0 1 6627.2 1517 1400 1486 3606 4151 4151 1 ANIAVQR Acetyl (Protein N-term) 812.45045 0.45045083 1687 P61087;A0A0J9YUI1;A0A0J9YU07;D3Z4U3;F8WIC2 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 1 0 0 0 2.5 0.5 1 1 40.679 40.679 2 0.016363 12122 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.511 81.744 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9352.1 1518 1687 1487 3607;3608 4152;4153 4152 2 ANILYAWAR Unmodified 1076.5767 0.57671398 1853 P97467;E9Q704;F8VQA4 Pam Peptidyl-glycine alpha-amidating monooxygenase;Peptidylglycine alpha-hydroxylating monooxygenase;Peptidyl-alpha-hydroxyglycine alpha-amidating lyase yes no 0 0 0 0 11.5 0.5 1 1 70.968 70.968 2 0.020942 20507 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.207 29.107 99.789 168.11 0 89.073 262.17 165.93 93 158 0 83 260 158 1 1 0 1 2 1 18789 1519 1853 1488 3609;3610 4154;4155 4154 2 ANINIEK Unmodified 800.43922 0.43921744 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 6.5 0.5 2 2 49.228 49.228 2;3 0.0057936 14103 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.12 45.794 497.59 423.5 480.2 373.72 413.21 289.57 468 436 485 365 419 278 4 4 5 2 4 4 41569 1520 1684 1489 3611;3612;3613;3614 4156;4157;4158;4159;4160 4160 5 ANIPIMDTGENPEVPFPR Unmodified 1995.9724 0.97241163 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 5.5 0.5 1 1 75.564 75.564 3 9.9529E-07 27396 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.744 56.605 39.31 36.131 35.065 98.882 36.017 20.254 37 37 37 93 37 19 1 1 1 2 1 1 17344 1521 1151 1490 3615;3616 4161;4162 4162 2 ANIVHLMLSSPEQIQK Unmodified 1806.9662 0.96620404 3186 Q9ERK4;E9Q1T9;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 10 0 1 70.801 70.801 3 0.0029012 20988 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.324 26.93 29.904 27.776 0 0 0 29.848 28 28 0 0 0 28 1 1 0 0 0 1 3202 1522 3186 1491 3617 4163 4163 1 ANLGGTEILTPLCNIYK Unmodified 1875.9764 0.97643437 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 9 0 1 80.545 80.545 3 0.00040739 27582 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.76 20.532 29.749 0 49.622 0 38.702 0 28 0 46 0 37 0 1 0 1 0 1 0 3957.4 1523 2841 1492 3618 4164 4164 1 ANLINNIFELAGLGK Unmodified 1585.8828 0.88279198 2488 Q8C129 Lnpep Leucyl-cystinyl aminopeptidase yes yes 0 0 0 0 12 0 1 101.39 101.39 3 0.0010566 28690 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.898 38.644 9.5621 8.7891 8.5034 14.795 0 9.594 9 9 9 14 0 9 1 1 1 1 0 1 1052.9 1524 2488 1493 3619 4165 4165 1 ANLIVLGAVPR Unmodified 1121.6921 0.69207809 1077 G3X920;Q9DBR3 Armc8 Armadillo repeat-containing protein 8 yes no 0 0 0 0 10.5 0.5 1 1 69.069 69.069 2 1.8638E-05 20110 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.2 72.968 0 68.053 66.247 0 0 180.29 0 65 65 0 0 176 0 1 1 0 0 2 15118 1525 1077 1494 3620;3621 4166;4167 4166 2 ANLLEIAPHLSAPLPIMLPLYK Unmodified 2413.3807 0.38071028 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 11.2 0.433 3 1 97.58 97.58 3;4;5 1.1524E-16 27989 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.06 88.634 28 27.538 7.5084 77.156 0 36.244 28 26 9 75 0 34 1 2 1 3 0 2 24723 1526 2179 1495 3622;3623;3624;3625 4168;4169;4170;4171;4172;4173 4173 6 ANNPEQNR Unmodified 941.43151 0.4315063 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 2 0.816 1 1 1 20.15 20.15 2 0.0023385 3103 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.61 87.755 49.97 37.187 45.981 53.654 90.629 6.396 47 37 47 53 89 6 3 2 3 2 2 1 9770.3 1527 2276 1496 3626;3627;3628 4174;4175;4176 4176 3 ANNTTYGLAAGLFTK Unmodified 1540.7886 0.78855725 1447 P24549 Aldh1a1 Retinal dehydrogenase 1 yes yes 0 0 0 0 10 0 1 74.019 74.019 3 0.0031582 22342 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.623 27.065 0 67.774 82.88 64.197 101.46 66.395 0 65 83 65 102 65 0 1 1 1 1 1 6868.8 1528 1447 1497 3629 4177 4177 1 ANNVDYTVHSVR Unmodified 1373.6688 0.66877646 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 4.5 0.5 1 1 37.864 37.864 3 0.00018021 10080 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.964 61.938 88.823 0 39.738 0 94.002 95.39 83 0 37 0 93 92 2 0 1 0 2 2 5983 1529 2178 1498 3630;3631 4178;4179 4179 2 ANPDPNCCLGVFGLSLYTTER Unmodified 2383.0937 0.093665749 1053 F8WJG3;P62996 Tra2b Transformer-2 protein homolog beta yes no 0 0 0 0 8 0 1 82.834 82.834 3 0.0022314 29358 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.672 40.462 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 2222.1 1530 1053 1499 3632 4180 4180 1 ANPFFVLQR Unmodified 1090.5924 0.59236404 2064 Q5SVR0 Tbc1d9b TBC1 domain family member 9B yes yes 0 0 0 0 10 0 1 70.797 70.797 2 0.038307 20916 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.426 22.031 0 0 78.035 45.627 0 0 0 0 74 46 0 0 0 0 1 1 0 0 2940 1531 2064 1500 3633 4181 4181 1 ANPGFSMLDFLSDKPFIK Unmodified 2026.0234 0.023384564 3081 Q9D7N9 Apmap Adipocyte plasma membrane-associated protein yes yes 0 0 0 1 10 0 1 91.362 91.362 4 0.027174 29677 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.395 24.607 0 29.792 0 20.767 0 0 0 28 0 19 0 0 0 1 0 1 0 0 2541.4 1532 3081 1501 3634 4182 4182 1 ANPIQGFSAK Unmodified 1031.54 0.53999412 1418 P19783 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 0 8.33 0.471 2 1 56.311 56.311 2;3 1.0985E-05 16816 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.94 90.508 336.28 34.026 259.47 0 150.2 213.18 315 37 241 0 148 204 3 1 2 0 2 3 84042 1533 1418 1502 3635;3636;3637 4183;4184;4185 4183 3 ANPWEGK Unmodified 800.3817 0.38170256 2534 Q8CG76 Akr7a2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 0 7 0 1 48.82 48.82 2 0.065295 13913 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.485 41.112 69.366 75.123 0 0 67.99 0 65 75 0 0 65 0 1 1 0 0 1 0 4291.9 1534 2534 1503 3638 4186 4186 1 ANSANLK Unmodified 716.3817 0.38170256 1316 P06745;A0A0U1RP97;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 8.5 2.69 1 1 1 1 35.966 35.966 2 0.010667 7375 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.62 42.022 563.61 627.09 503.38 640.41 794.89 546.57 531 633 529 617 806 529 4 4 4 3 4 3 129870 1535 1316 1504 3639;3640;3641;3642 4187;4188;4189;4190 4189 4 ANSQDSLASR Unmodified 1047.4945 0.49450049 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 4 0 1 29.266 29.266 2 5.2968E-07 6555 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.56 83.822 0 19.826 23.32 8.4471 0 0 0 19 23 9 0 0 0 1 1 1 0 0 1422.1 1536 2483 1505 3643 4191 4191 1 ANSVTWNPHK Unmodified 1152.5676 0.56760585 1579;1578 P48318;P48320 Gad1;Gad2 Glutamate decarboxylase 1;Glutamate decarboxylase 2 no no 0 0 0 0 8.5 0.5 1 1 43.399 43.399 3 0.0016295 10772 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.01 48.846 138.99 99.156 0 75.956 261.9 160.95 130 102 0 74 259 158 1 1 0 1 1 1 27325 1537 1578;1579 1506 3644;3645 4192;4193 4192 2 ANTFVAELK Deamidation (N) 992.51786 0.51786169 1327 P08249;A0A0G2JF23 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 1 0 0 7.75 3.11 1 1 1 1 66.857 66.857 2;3 0.0075432 23585 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.434 32.082 137.62 177.5 57.683 199.93 117.67 125.4 129 176 56 186 121 120 2 3 2 3 2 1 14946 1538 1327 1507 3646;3647;3648;3649 4194;4195;4196;4197 4195 398 4 ANTFVAELK Unmodified 991.53385 0.53384611 1327 P08249;A0A0G2JF23 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 63.248 63.248 2 2.5439E-05 19404 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.25 82.531 969.9 1133.3 1339.4 1124.4 994.36 1057.1 913 1145 1330 1104 1004 1013 5 7 7 7 6 6 542060 1539 1327 1507 3650;3651;3652;3653;3654 4198;4199;4200;4201;4202;4203;4204;4205 4203 8 ANTIGISLIK Unmodified 1028.623 0.62299547 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 9.5 0.5 1 1 68.518 68.518 2 1.3957E-08 19778 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 149.23 67.683 227.18 0 230.76 186.37 110.49 157.77 213 0 222 185 111 148 2 0 2 2 1 1 31548 1540 1368 1508 3655;3656 4206;4207 4207 2 ANTNEVLWAVVAAFTK Unmodified 1732.9148 0.91482039 2961 Q9CRA5 Golph3 Golgi phosphoprotein 3 yes yes 0 0 0 0 12 0 1 106.01 106.01 3 3.7449E-06 29387 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.92 57.722 11.713 0 15.089 0 27.234 9.2449 11 0 14 0 27 9 1 0 1 0 2 1 2012.6 1541 2961 1509 3657 4208;4209 4209 2 ANTPSVEDPVRR Unmodified 1339.6844 0.68442653 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 1 4 0 1 36.737 36.737 3 0.058257 10002 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.507 16.034 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1542 107 1510 3658 4210 4210 1 ANTVYGLGFASEQQLTQFAEK Unmodified 2301.1277 0.12772629 2830 Q99JP6 Homer3 Homer protein homolog 3 yes yes 0 0 0 0 8 0 1 82.934 82.934 3 0.016539 29422 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 30.925 14.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1543 2830 1511 3659 4211 4211 1 ANVADTK Acetyl (Protein N-term) 759.37628 0.37628284 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 1 0 0 0 2.5 0.5 1 1 41.192 41.192 2 0.025425 12610 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.559 42.299 117.81 108.05 146.5 171.61 219.17 211.21 111 111 149 167 224 204 1 1 2 1 2 2 45797 1544 3279 1512 3660;3661 4212;4213 4213 2 ANVAKPGLVDDFEK Unmodified 1501.7777 0.77765821 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 1 8.67 3.09 1 1 1 60.023 60.023 3;4 0.00051288 19454 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.964 46.406 440.41 271.82 230.5 236.45 180.37 214.43 413 287 232 232 185 204 3 3 2 2 2 2 25783 1545 3156 1513 3662;3663;3664 4214;4215;4216 4215 3 ANVEKPVK Unmodified 883.51272 0.51271674 519 A2ATI9;Q99JX3;A2ATI8;A2ATI6;Q91X51 Gorasp2;Gorasp1 Golgi reassembly-stacking protein 2;Golgi reassembly-stacking protein 1 yes no 0 0 0 1 8 0 1 40.058 40.058 3 0.025031 9195 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.494 37.921 108.01 138.54 124.17 171.36 200.58 143.52 102 139 130 167 204 140 1 1 1 1 1 1 8756.1 1546 519 1514 3665 4217 4217 1 ANVISELNSILQQMNR Unmodified 1828.9465 0.94653123 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 10.5 0.5 1 1 98.57 98.57 3 6.1204E-05 32277 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.331 41.995 0 0 14.749 8.958 0 9.594 0 0 14 9 0 9 0 0 1 1 0 1 8182.1 1547 2343 1515 3666;3667 4218;4219 4218 2 ANVIVVDTQK Unmodified 1085.6081 0.60807369 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 7 0 1 54.89 54.89 3 0.0010521 16790 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.321 32.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1548 2890 1516 3668 4220 4220 1 ANVVTSPK Unmodified 814.45487 0.45486751 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;F6RWZ9 Camk2d yes no 0 0 0 0 9.25 2.28 1 1 1 1 41.506 41.506 2 0.001186 10695 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.79 79.78 246.29 235.28 271.3 154.96 335.59 247.33 232 241 268 148 333 241 3 4 3 2 3 4 22932 1549 103 1517 3669;3670;3671;3672 4221;4222;4223;4224 4221 4 ANWEAQQR Unmodified 1001.4679 0.46789181 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 7 3.16 1 1 1 1 1 35.67 35.67 2 0.0038903 9069 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.87 64.058 305.1 327.07 398.89 376.43 386.28 370.29 287 333 399 371 389 353 3 4 3 4 4 3 88321 1550 879 1518 3673;3674;3675;3676;3677 4225;4226;4227;4228;4229 4226 5 ANWYFLLAR Unmodified 1152.608 0.60801411 1551 P45952 Acadm Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 12 0 1 81.11 81.11 2 0.0027934 22313 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.429 56.859 68.792 92.952 81.449 54.62 92.15 76.254 65 93 83 56 93 74 1 1 1 1 1 1 10680 1551 1551 1519 3678 4230 4230 1 ANYDVLESQK Unmodified 1165.5615 0.56151742 2951 Q9CR00 Psmd9 26S proteasome non-ATPase regulatory subunit 9 yes yes 0 0 0 0 5.5 0.5 1 1 54.466 54.466 3 0.0022424 18172 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.439 41.752 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 3176.7 1552 2951 1520 3679;3680 4231;4232 4231 2 ANYLASPPLVIAYAIAGTVR Unmodified 2059.1466 0.14661124 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 1 0 2 102.41 102.41 3 2.655E-14 34193 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.63 97.716 5.3329 6 12.973 0 0 11.726 5 6 12 0 0 11 2 1 2 0 0 2 1894.6 1553 1472 1521 3681;3682 4233;4234;4235;4236 4235 4 ANYLSQALQAGTVWINCYDVFGAQSPFGGYK Unmodified 3424.6187 0.61866173 1562 P47738;A0A0G2JF60;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 107.38 107.38 4 8.7778E-09 29546 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.783 39.117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2770.1 1554 1562 1522 3683;3684 4237;4238 4238 2 APAAAADAGDVR Unmodified 1083.5309 0.530886 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 0 3 0 1 37.41 37.41 2 0.015976 10876 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.608 23.235 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1555 2496 1523 3685 4239 4239 1 APAAAADAGDVRDPAR Unmodified 1522.7488 0.7488177 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 1 3 0 1 37.648 37.648 3 3.7029E-05 10985 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.91 56.404 0 19.152 0 0 29.288 0 0 18 0 0 28 0 0 1 0 0 1 0 6438.1 1556 2496 1524 3686 4240 4240 1 APAAIGPYSQAVQVDR Unmodified 1641.8475 0.84746911 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 8.67 3.09 1 1 1 57.299 57.299 2;3 1.6396E-05 18103 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.08 48.882 169.23 158.54 50.753 219.91 273.75 476.15 158 149 47 204 287 454 2 2 1 2 3 3 26024 1557 1611 1525 3687;3688;3689 4241;4242;4243;4244 4242 4 APAFLSAEEVQDHLR Unmodified 1681.8424 0.84238373 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 6 1 1 1 63.65 63.65 3 2.2205E-50 22447 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 197.19 172.22 156.38 256.77 303.41 209.27 290.22 284.87 148 256 304 213 296 275 1 2 2 2 2 2 42413 1558 1223 1526 3690;3691 4245;4246 4245 2 APAPAAPAAAEPQAEAPAAAASSEQSVAVK Unmodified 2728.3668 0.36678737 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 4 0.707 1 2 1 57.427 57.427 4;5 1.0167E-13 19805 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.952 60.984 79.907 171.58 42.829 155.95 258.56 106.46 75 167 46 148 260 102 2 3 1 2 4 1 54733 1559 2769 1527 3692;3693;3694;3695 4247;4248;4249;4250 4249 4 APAPAAPAAAEPQAEAPAAAASSEQSVAVKE Unmodified 2857.4094 0.40938046 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 4 2.67 3 5 3 2 1 58.169 58.169 3;4;5 5.5823E-13 19782 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.095 55.902 229.11 513.78 580.56 377.58 712.2 484.08 216 502 575 372 706 465 9 12 13 10 11 10 736360 1560 2769 1528 3696;3697;3698;3699;3700;3701;3702;3703;3704;3705;3706;3707;3708;3709 4251;4252;4253;4254;4255;4256;4257;4258;4259;4260;4261;4262;4263;4264;4265;4266;4267;4268 4267 18 APAVPPARPGSR Unmodified 1174.6571 0.65708956 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;P39053;F6RRH9;F6TH70 Dnm1 Dynamin-1 no no 0 0 0 1 8.75 2.49 2 1 1 33.158 33.158 3 0.00046524 6855 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.525 57.771 364.78 299.93 293.04 275.44 332.78 264.85 343 306 291 268 335 254 7 6 5 5 5 4 17208 1561 118;1534;988 1529 3710;3711;3712;3713 4269;4270;4271;4272;4273;4274;4275;4276 4271 8 APDFVFYAPR Unmodified 1181.5869 0.58694431 1451;1452;1453 P26043;Q7TSG6;P26041;P26040 Rdx;Msn;Ezr Radixin;Moesin;Ezrin no no 0 0 0 0 7.5 0.5 1 1 70.504 70.504 2 5.2482E-05 23467 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.8 71.583 59.504 64.42 43.537 46.469 64.564 37.6 56 65 46 46 65 37 1 1 1 1 1 1 9894.9 1562 1453;1452;1451 1530 3714;3715 4277;4278 4278 2 APDNYIVK Unmodified 918.48108 0.48108226 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 6 0 1 52.602 52.602 2 0.051648 16553 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.969 15.902 48.572 44.085 94.751 42.729 101.09 105.85 46 46 92 46 102 102 1 1 1 1 1 1 5114.5 1563 2744 1531 3716 4279 4279 1 APDSGAEVER Unmodified 1029.4727 0.47270242 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4.75 4.82 1 1 1 1 32.051 32.051 2 4.989E-06 8112 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 132.88 82.172 167.09 178.23 234.42 180.61 40.221 265.35 157 181 231 176 42 250 2 3 3 3 1 3 138270 1564 510 1532 3717;3718;3719;3720 4280;4281;4282;4283 4281 4 APDWVDAEECHR Unmodified 1483.615 0.61502633 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;B1ATY9 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 3 0 1 48.333 48.333 3 0.00018374 15867 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.324 65.697 48.816 55.556 44.07 47.651 0 0 46 56 46 46 0 0 1 1 1 1 0 0 8574.9 1565 589 1533 3721 4284 4284 1 APEGEETEFYVSPEDLEAQLQSDER Unmodified 2867.2621 0.2621071 1682 P60904;G5E8T0 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 0 3.8 4.62 2 2 1 81.71 81.71 3;4 8.3918E-17 28501 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.796 70.22 57.54 51.301 59.142 19.751 27.855 79.155 55 52 57 19 28 75 5 3 3 3 2 3 19455 1566 1682 1534 3722;3723;3724;3725;3726 4285;4286;4287;4288;4289;4290;4291 4289 7 APEHIIPQPTQTDR Unmodified 1601.8162 0.81616898 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8 3.56 1 1 1 43.74 43.74 3 7.7539E-05 13020 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.156 51.525 315.62 186.58 176.35 211.13 135.74 183.74 296 195 176 204 139 176 4 3 2 3 2 2 45273 1567 510 1535 3727;3728;3729 4292;4293;4294;4295 4292 4 APEIMLNSK Unmodified 1001.5216 0.52156686 1769;769 P63085;D3Z3G6;Q63844;A0A0U1RPX4;D3Z6D8 Mapk1;Mapk3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 0 0 0 0 7.5 0.5 1 1 58.601 58.601 3 0.011918 17896 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.683 23.873 59.862 44.908 99.124 74.168 42.875 107.51 56 46 93 74 46 102 1 1 1 2 1 1 10501 1568 1769;769 1536 3730;3731 4296;4297 4297 2 APEPNNHTEYASIETGK 2 Deamidation (N) 1858.8221 0.8221018 2224 Q6P6I8;E0CYM8;P97797;A0A0R4J1Z7;E0CX65;E9QPT7 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 2 0 0 3 0 2 50.282 50.282 3;4 0.00024479 16478 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.605 50.099 69.468 54.9 0 79.741 79.652 107 65 56 0 74 84 102 1 1 0 1 2 1 10604 1569 2224 1537 3732;3733 4298;4299 4298 885;886 2 APEPNNHTEYASIETGK Unmodified 1856.8541 0.85407063 2224 Q6P6I8;E0CYM8;P97797;A0A0R4J1Z7;E0CX65;E9QPT7 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 0 4.5 0.5 1 1 45.364 45.364 3 6.185E-06 14073 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.367 72.112 0 0 29.449 68.261 54.683 47.476 0 0 28 65 56 46 0 0 1 2 1 1 9976.7 1570 2224 1537 3734;3735 4300;4301 4300 2 APEPNNHTEYASIETGK Deamidation (N) 1857.8381 0.83808621 2224 Q6P6I8;E0CYM8;P97797;A0A0R4J1Z7;E0CX65;E9QPT7 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 1 0 0 4 0 1 47.477 47.477 3 2.4154E-05 15088 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.19 73.886 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 8415.8 1571 2224 1537 3736 4302 4302 885;886 1 APEVILGMGYK Unmodified 1176.6213 0.62128091 2327 Q80W82;Q3TQZ7;Q8C9D4;Q80W80;E9QN59;Q61831;Q9WTU6;A0A0G2JG69;A0A0G2JGL2;D3Z1Z4;A6P3E4;Q7TSJ7;G3X8U9;Q91Y86 Mapk10;Mapk9;Mapk8 Mitogen-activated protein kinase;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 8 yes no 0 0 0 0 9 0 1 71.494 71.494 2 0.00037561 23369 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.972 49.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1572 2327 1538 3737 4303 4303 1 APEVSQHVYQAYETILK Unmodified 1975.0051 0.005091963 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 8 0 1 70.898 70.898 3 0.039517 23755 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.818 7.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1573 1203 1539 3738 4304 4304 1 APEVSQYIYQVYDSILK Unmodified 2015.0252 0.025158703 3123 Q9DBG3;H3BKM0 Ap2b1 AP-2 complex subunit beta yes no 0 0 0 0 9.71 1.67 2 2 1 1 1 98.404 98.404 3;4 4.5529E-09 32241 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.29 95.711 158.01 123.13 88.364 164.43 70.073 92.741 148 124 83 151 70 88 4 5 3 5 3 3 47208 1574 3123 1540 3739;3740;3741;3742;3743;3744;3745 4305;4306;4307;4308;4309;4310;4311;4312;4313;4314;4315 4313 11 APEYLHR Unmodified 884.45045 0.45045083 1847 P97379;A0A0J9YTQ8;A0A0J9YUY8 G3bp2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 0 6 0 1 35.009 35.009 3 0.0018745 8283 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.99 84.442 0 0 0 30.079 27.906 0 0 0 0 28 28 0 0 0 0 1 1 0 3676.9 1575 1847 1541 3746 4316 4316 1 APFALQVNTLPLNFDK Unmodified 1786.9618 0.96177059 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 9.5 0.5 1 1 88.125 88.125 3 1.1638E-05 28376 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.983 51.787 20.276 22.041 0 33.883 0 20.254 19 22 0 31 0 19 1 1 0 1 0 1 4690.8 1576 2141 1542 3747;3748 4317;4318 4318 2 APFDLFENK Unmodified 1079.5288 0.52876073 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 8 0 1 76.707 76.707 2 0.0011101 26443 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.94 54.148 69.57 34.677 0 49.249 54.683 47.476 65 37 0 46 56 46 1 1 0 1 1 1 4933.3 1577 1354 1543 3749 4319 4319 1 APFDLFENR Unmodified 1107.5349 0.53490874 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 7 0 1 73.488 73.488 2 0.016286 25513 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.371 30.21 0 47.49 86.957 0 103.06 105.79 0 46 83 0 102 102 0 1 1 0 1 1 9185.9 1578 1322 1544 3750 4320 4320 1 APFEEIAAHCGAR Unmodified 1427.6616 0.66158259 2263 Q6ZQ18;A0A1W2P7T9 Efr3b Protein EFR3 homolog B yes no 0 0 0 0 5 0 1 50.606 50.606 3 0.0025028 16284 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.463 36.892 29.483 56.826 46.086 27.153 37.455 0 28 56 47 28 37 0 1 1 1 1 1 0 2267.6 1579 2263 1545 3751 4321 4321 1 APFLETDQLK Unmodified 1160.6077 0.60773933 897 E9Q4G8;E9Q3Q6;Q61490 Alcam CD166 antigen yes no 0 0 0 0 7 0.816 1 1 1 67.338 67.338 2;3 0.00059147 22758 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.573 49.601 49.985 94.836 44.595 47.686 82.548 86.122 47 93 47 47 83 83 2 3 2 2 2 2 10573 1580 897 1546 3752;3753;3754 4322;4323;4324 4323 3 APGDEEAQVENLITTNAAEPQK Unmodified 2324.1132 0.11319844 3036 Q9D164 Fxyd6 FXYD domain-containing ion transport regulator 6 yes yes 0 0 0 0 3.5 0.5 1 1 71.523 71.523 3 3.3651E-26 25953 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.59 91.173 0 20.216 0 29.921 36.338 28.811 0 19 0 28 37 28 0 1 0 1 1 1 3928.9 1581 3036 1547 3755;3756 4325;4326 4326 2 APGDEEAQVENLITTNAAEPQKAEN Deamidation (N) 2639.2198 0.21984836 3036 Q9D164 Fxyd6 FXYD domain-containing ion transport regulator 6 yes yes 0 1 0 1 2.5 0.5 2 2 71.017 71.017 4 8.4624E-05 25617 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.432 37.63 55.279 75.733 30.903 113.74 91.822 78.127 52 74 33 107 94 75 3 3 2 4 4 3 13191 1582 3036 1548 3757;3758;3759;3760 4327;4328;4329;4330;4331 4329 1059 5 APGDEEAQVENLITTNAAEPQKAEN Unmodified 2638.2358 0.23583277 3036 Q9D164 Fxyd6 FXYD domain-containing ion transport regulator 6 yes yes 0 0 0 1 2.5 0.5 1 1 71.294 71.294 4 9.5428E-23 26405 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.407 93.403 20.292 77.68 44.954 49.237 48.116 0 19 75 46 47 46 0 1 3 2 2 1 0 33436 1583 3036 1548 3761;3762 4332;4333;4334 4333 3 APGFAHLAGLDK Unmodified 1195.635 0.63495714 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 8 0 1 60.683 60.683 3 0.00059031 18927 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.55 32.027 189.08 167.07 0 0 149.17 164.17 177 169 0 0 148 158 1 1 0 0 1 1 22699 1584 2754 1549 3763 4335 4335 1 APGFAQMLK Unmodified 961.50552 0.50552287 1543 P42932;H3BL49;H3BKR8 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 9.5 0.5 1 1 65.876 65.876 2 0.0008244 18589 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.78 69.471 58.845 82.015 139.35 130.91 152.63 192.85 56 83 139 130 158 185 1 1 1 1 1 1 12698 1585 1543 1550 3764;3765 4336;4337 4337 2 APGIIPR Unmodified 722.44391 0.44390889 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7.5 0.5 1 1 46.287 46.287 2 0.020245 12796 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.84 39.083 1030.6 627.14 1371.2 1048.5 517.8 1123.7 971 653 1350 1043 528 1068 4 3 4 4 2 3 371500 1586 1881 1551 3766;3767 4338;4339;4340;4341 4338 4 APGSEDR Unmodified 730.32458 0.32458162 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.5 5.5 1 1 21.538 21.538 2 0.027409 3537 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.262 47.891 78.427 101.94 77.502 32.871 98.904 91.445 74 102 79 33 99 88 3 3 3 2 3 2 60906 1587 510 1552 3768;3769 4342;4343;4344 4342 3 APIAFRPFK Unmodified 1045.6073 0.60728582 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 0 0 1 1 0 1 60.887 60.887 3 0.00089314 20006 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 102 74.477 191.24 155.28 187.42 128.28 140.49 245.44 180 161 188 130 148 234 1 1 1 1 1 1 15056 1588 1603 1553 3770 4345 4345 1 APIIAVTR Unmodified 839.52289 0.52288749 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 51.124 51.124 2 0.00040122 13654 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 153.73 107.71 2633.1 3022.3 3722.3 3322 3779.4 4029.5 2473 3031 3744 3288 3889 3869 5 5 6 5 5 5 1437800 1589 1609 1554 3771;3772;3773;3774;3775 4346;4347;4348;4349;4350;4351;4352 4347 7 APILIATDVASR Unmodified 1225.703 0.7030367 2135;1963 Q8BTS0;Q61656;S4R1I6;Q501J6;Q3U741;Q3TU25 Ddx5;Ddx17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 8.5 0.5 1 1 66.234 66.234 2 0.00010586 20800 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.442 66.327 167.61 116.71 43.893 86.904 63.748 136.76 157 121 46 83 65 130 2 2 1 2 1 2 28909 1590 2135;1963 1555 3776;3777 4353;4354 4354 2 APIQWEER Unmodified 1027.5087 0.50869399 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 52.042 52.042 2 0.0038552 16997 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.05 82.086 586.22 500.81 821.59 708.51 870.17 974.01 552 511 819 708 895 937 3 3 4 4 4 4 224140 1591 307 1556 3778;3779;3780;3781 4355;4356;4357;4358 4358 4 APIRPDIVNFVHTNLR Unmodified 1861.0323 0.032250187 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 1 10 0 1 62.949 62.949 4 4.9082E-05 17334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.119 79.328 127.52 117.27 108.27 93.333 99.097 96.31 120 120 111 93 102 93 1 1 1 1 1 1 14884 1592 3093 1557 3782 4359 4359 1 APLATGEDDDDEVPDLVENFDEASKNEAN Unmodified 3118.3375 0.33745689 2169 Q64152 Btf3 Transcription factor BTF3 yes yes 0 0 0 1 2 0 1 83.499 83.499 4 1.7216E-12 28739 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.925 56.867 0 0 19.476 0 9.2034 6.1334 0 0 18 0 9 6 0 0 1 0 1 1 2082.5 1593 2169 1558 3783 4360 4360 1 APLLQEAQAK Unmodified 1067.5975 0.597509 1977 Q3UHB1 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes yes 0 0 0 0 10 3 1 1 55.912 55.912 2;3 3.0908E-05 17288 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.25 72.721 48.79 44.69 57.665 0 55.225 97.562 46 46 56 0 56 93 1 1 1 0 1 1 6397.1 1594 1977 1559 3784;3785 4361;4362 4361 2 APLPLGHIK Unmodified 944.58074 0.58073672 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 10 0 1 53.425 53.425 3 0.025572 13138 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.082 29.173 117.5 127.7 161.62 0 181.61 133.4 111 130 157 0 178 130 1 1 1 0 1 1 14549 1595 1446 1560 3786 4363 4363 1 APLQGILQLGQDLKPK Unmodified 1718.0091 0.0090551289 3239 Q9JKY5;A0A0G2JFU3 Hip1r Huntingtin-interacting protein 1-related protein yes no 0 0 0 1 11 0 1 82.299 82.299 3 1.4237E-05 25702 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.326 68.226 0 48.944 0 40.441 48.116 39.442 0 46 0 37 46 37 0 1 0 1 1 1 4779.5 1596 3239 1561 3787 4364;4365 4365 2 APLVCLPVFVSK Unmodified 1328.7526 0.75262943 302 A0A1L1SSF8;Q91V76 Ester hydrolase C11orf54 homolog yes no 0 0 0 0 11.5 0.5 1 1 83.887 83.887 3 3.409E-05 26157 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.548 60.805 59.402 45.023 77.17 0 106.69 0 56 46 74 0 102 0 2 1 1 0 2 0 27574 1597 302 1562 3788;3789 4366;4367 4366 2 APLVPDIPSADPGPGPAASR Unmodified 1883.9741 0.97412619 2784 Q91ZP9 Necab2 N-terminal EF-hand calcium-binding protein 2 yes yes 0 0 0 0 5.5 0.5 1 1 66.303 66.303 3 2.3567E-06 23630 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.826 39.269 69.317 54.48 25.748 88.613 88.514 106.21 65 56 28 84 92 102 2 2 1 2 2 2 9840.2 1598 2784 1563 3790;3791 4368;4369 4368 2 APLVPPGSPVVNALFR Unmodified 1632.9352 0.9351619 3205 Q9JHU9 Isyna1 Inositol-3-phosphate synthase 1 yes yes 0 0 0 0 10.5 0.5 1 1 82.607 82.607 3 2.7662E-05 26259 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.26 55.384 59.967 0 20.407 0 65.967 79.172 56 0 19 0 65 75 2 0 1 0 2 2 14209 1599 3205 1564 3792;3793 4370;4371;4372 4370 3 APNQPAPVEGK Unmodified 1106.572 0.57202253 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 5 0 1 41.049 41.049 2 0.0021748 11635 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.29 58.906 0 29.792 0 0 29.288 0 0 28 0 0 28 0 0 1 0 0 1 0 4658.2 1600 2583 1565 3794 4373 4373 1 APNSPDVLEIEFK Unmodified 1457.7402 0.74021007 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 5 0 1 74.263 74.263 3 0.00021996 27348 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.92 38.281 49.012 25.883 36.145 46.885 65.836 0 46 28 37 46 65 0 1 1 1 1 1 0 5223.1 1601 1393 1566 3795 4374 4374 1 APPESLCR Unmodified 928.44365 0.44365089 2980 Q9CWS0 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 0 9 4 1 1 38.007 38.007 2 0.049916 10265 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.673 26.831 147.36 174.79 151.48 160.82 93.411 99.138 139 176 157 157 93 93 2 2 2 2 1 1 21086 1602 2980 1567 3796;3797 4375;4376 4375 2 APPGAPEK Unmodified 765.4021 0.40210366 2149 Q62277 Syp Synaptophysin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 38.648 38.648 2 0.014908 10580 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.568 10.44 1137.8 509.16 1003.5 1001.5 1214.3 798.34 1067 516 976 975 1221 765 4 4 4 3 4 4 320390 1603 2149 1568 3798;3799;3800;3801 4377;4378;4379;4380;4381 4381 5 APPGVPR Unmodified 692.39696 0.3969587 988 F6RRH9;F6TH70 Dnm1 yes no 0 0 0 0 8.67 3.09 1 1 1 36.356 36.356 2 0.017722 9482 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.17 37.553 498.36 419.31 529.81 526.99 579.05 434.58 468 434 527 521 591 417 3 4 3 4 4 3 91171 1604 988 1569 3802;3803;3804 4382;4383;4384;4385 4385 4 APPGVPSR Unmodified 779.42899 0.42898711 118 A0A0J9YUN4;A0A0J9YUE9 yes no 0 0 0 0 7.75 3.11 1 1 1 1 36.391 36.391 2 0.021629 9438 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.282 14.565 433.29 416.25 402.53 348.23 588 573.79 408 425 407 344 594 554 5 5 4 3 4 5 118680 1605 118 1570 3805;3806;3807;3808 4386;4387;4388;4389;4390 4386 5 APPLVENEEAEPSR Unmodified 1536.742 0.74200098 3357 Q9Z0G0;A0A1D5RML2 Gipc1 PDZ domain-containing protein GIPC1 yes no 0 0 0 0 3 0 1 48.661 48.661 3 0.0040847 15992 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.482 21.469 29.952 18.196 0 0 28.62 19.437 28 19 0 0 28 19 1 1 0 0 1 1 2389.5 1606 3357 1571 3809 4391 4391 1 APPSSGR Unmodified 670.33984 0.33983775 891 E9Q317;O55128;D3YY73;D3Z2N9 Gm10094;Sap18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 0 5 0 1 21.448 21.448 2 0.048867 3191 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.847 8.3619 12.832 8.7107 0 15.976 22.278 0 12 9 0 15 22 0 1 1 0 1 1 0 1229.5 1607 891 1572 3810 4392 4392 1 APPSVFAQVPQAPPVLVFK Unmodified 1991.1244 0.12441924 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 11.1 1.19 1 3 4 2 2 87.922 87.922 2;3;4;5 3.3937E-14 27978 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.27 102.67 286.59 350.52 87.815 423.11 248.74 358.46 268 345 84 402 247 343 6 7 2 7 5 6 754150 1608 1311 1573 3811;3812;3813;3814;3815;3816;3817;3818;3819;3820;3821;3822 4393;4394;4395;4396;4397;4398;4399;4400;4401;4402;4403;4404;4405;4406;4407;4408 4403 16 APPSVPSR Unmodified 809.43955 0.43955179 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 6 0 1 35.623 35.623 2 0.052588 8612 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.589 41.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1609 960 1574 3823 4409 4409 1 APQAQTTPGPGPAGAK Unmodified 1447.7419 0.74194141 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 6 0 1 41.4 41.4 3 3.0457E-08 11340 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.285 56.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1610 1275 1575 3824 4410 4410 1 APQETYADIGGLDNQIQEIK Unmodified 2202.0804 0.080441751 1712 P62192 Psmc1 26S protease regulatory subunit 4 yes yes 0 0 0 0 5 0 1 73.956 73.956 3 1.0698E-05 27243 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.142 34.707 0 23.757 42.787 27.638 22.115 19.623 0 23 42 28 23 19 0 1 1 1 1 1 5183.9 1611 1712 1576 3825 4411 4411 1 APQGTQGSKPAQSSR Unmodified 1498.7488 0.7488177 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 1 7 0 1 28.14 28.14 3 0.00017881 4660 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.751 35.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1612 2496 1577 3826 4412 4412 1 APQQVHR Unmodified 834.44603 0.44603416 883 E9Q242;P54822 Adsl Adenylosuccinate lyase yes no 0 0 0 0 5 0 1 21.345 21.345 3 0.0095859 3129 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.847 43.489 20.189 0 33.273 28.037 31.043 33.226 19 0 32 28 32 32 1 0 1 1 1 1 2331.7 1613 883 1578 3827 4413 4413 1 APQVDVDR Unmodified 898.45084 0.45084476 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 4 0 1 39.009 39.009 2 0.01679 11111 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.163 41.501 59.729 0 60.291 0 58.576 0 56 0 56 0 56 0 1 0 1 0 1 0 6488.9 1614 3002 1579 3828 4414 4414 1 APQVSTPTLVEAAR Unmodified 1438.778 0.77799256 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 8 3.56 1 1 1 55.652 55.652 3 7.0643E-25 18150 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143.94 121.06 137.17 214.59 103.19 140.74 267.7 209.83 129 212 102 139 269 204 2 3 1 3 3 3 113390 1615 1321 1580 3829;3830;3831 4415;4416;4417 4416 3 APQVYILPPPAEQLSR Unmodified 1777.9727 0.97266962 2 A0A075B5P3;A0A0A6YVP0;P01867 Ighg2b;Igh-3 Ig gamma-2B chain C region yes no 0 0 0 0 7 0 1 71.673 71.673 3 0.00066089 24678 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.281 35.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1616 2 1581 3832 4418 4418 1 APSDLYQIILK Unmodified 1259.7125 0.71253876 1190 O35350 Capn1 Calpain-1 catalytic subunit yes yes 0 0 0 0 9 0 1 81.457 81.457 2 0.0061409 28062 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.374 13.465 0 19.566 38.86 0 57.278 37.808 0 19 37 0 56 37 0 1 1 0 1 1 2611.4 1617 1190 1582 3833 4419 4419 1 APSFHDK Unmodified 800.3817 0.38170256 1640 P56393 Cox7b Cytochrome c oxidase subunit 7B, mitochondrial yes yes 0 0 0 0 6 0 1 37.279 37.279 3 0.0052949 9382 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.752 45.305 326.39 284.23 266.46 326.77 145.67 225.03 307 292 277 316 161 215 1 1 1 1 1 1 18561 1618 1640 1583 3834 4420 4420 1 APSLDSSLPQLPSPSSPGAPLLSNLPR Unmodified 2697.4337 0.43374472 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10 2.53 1 1 1 2 85.778 85.778 3;4 5.9658E-18 33625 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.991 70.119 90.939 18.373 29.092 60.869 92.104 156.72 85 19 28 56 93 149 4 1 1 2 3 4 32407 1619 510 1584 3835;3836;3837;3838;3839 4421;4422;4423;4424;4425 4425 5 APSLQSEPLPR Unmodified 1193.6404 0.64043645 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 5 0 1 50.751 50.751 2 0.022002 16335 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.806 34.3 29.856 37.355 0 0 37.714 28.772 28 37 0 0 37 28 1 1 0 0 1 1 1955.6 1620 63 1585 3840 4426 4426 1 APSMVAAAVTYSK Unmodified 1294.6591 0.65912298 2895 Q9CPQ8 Atp5l ATP synthase subunit g, mitochondrial yes yes 0 0 0 0 9 0 1 64.524 64.524 3 0.0014966 20090 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.487 41.119 59.664 44.359 33.595 78.042 44.531 0 56 46 37 74 46 0 1 1 1 1 1 0 2826.5 1621 2895 1586 3841 4427 4427 1 APSMVAAAVTYSKPR Unmodified 1547.813 0.81299786 2895 Q9CPQ8 Atp5l ATP synthase subunit g, mitochondrial yes yes 0 0 0 1 6.5 5.5 1 1 58.801 58.801 3 5.1317E-42 13664 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 186.39 166.75 296.64 141.28 333.01 170.22 27.265 207.09 278 149 324 167 28 195 3 3 4 3 1 3 50505 1622 2895 1587 3842;3843 4428;4429;4430;4431 4431 4 APSPAPRPPSR Unmodified 1131.6149 0.6148904 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 10 3 1 1 30.118 30.118 3 0.0023819 5449 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.672 45.716 0 0 0 170.97 33.694 166.4 0 0 0 157 37 157 0 0 0 2 1 2 8131.8 1623 1999 1588 3844;3845 4432;4433 4432 2 APSPEPPTEEVAAETNSTPDDLEAQDALSPETTEEK Unmodified 3794.7018 0.70177806 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 1 0 1 69.435 69.435 4 7.4917E-09 23596 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.607 42.145 9.5993 0 9.6896 0 14.644 0 9 0 9 0 14 0 1 0 1 0 1 0 4700.3 1624 3193 1589 3846 4434 4434 1 APSQLALFSVSDK Unmodified 1361.7191 0.7190807 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 9 0 1 72.368 72.368 3 2.0635E-07 23748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.44 79.969 0 39.368 0 0 0 69.29 0 37 0 0 0 65 0 1 0 0 0 1 9551.9 1625 2977 1590 3847 4435 4435 1 APSSSSVGISEWLDQK Unmodified 1689.821 0.82097959 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 72.742 72.742 3 9.4275E-06 25176 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.38 72.319 138.81 123.78 75.613 163.32 200.92 144.55 130 120 74 157 204 139 2 2 1 3 3 2 20613 1626 2860 1591 3848;3849 4436;4437;4438 4437 3 APSTSTPEPTR Unmodified 1142.5568 0.5567664 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173;E9QKR1 Enah Protein enabled homolog yes no 0 0 0 0 4.5 0.5 1 1 32.83 32.83 2 0.0028676 8139 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.228 53.991 0 0 9.738 37 0 20.254 0 0 9 37 0 19 0 0 1 1 0 1 8344.7 1627 56 1592 3850;3851 4439;4440 4439 2 APTIDIRPR Unmodified 1037.5982 0.5981777 1435 P22723 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes yes 0 0 0 1 7 0 1 44.692 44.692 3 0.0056915 12072 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.692 47.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1628 1435 1593 3852 4441 4441 1 APTIEQMK Unmodified 916.4688 0.46880301 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 0 13 0 1 50.953 50.953 2 0.012045 16780 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.43 51.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1629 1769 1594 3853 4442 4442 1 APTIQPQHSHEAVR Unmodified 1569.8012 0.80118762 936 E9Q8P8;Q3TY60 Fam131b Protein FAM131B yes no 0 0 0 0 5 0 1 29.576 29.576 4 0.0012251 6257 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.136 45.22 0 29.792 0 0 28.291 29.041 0 28 0 0 28 28 0 1 0 0 1 1 1865.5 1630 936 1595 3854 4443 4443 1 APTSDEIHITVGEAR Unmodified 1594.7951 0.79509919 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 4 0 1 50.153 50.153 3 0.00067714 16316 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.209 36.983 60.088 0 0 0 46.111 58.38 56 0 0 0 46 56 1 0 0 0 1 1 10500 1631 1783 1596 3855 4444 4444 1 APTVPER Unmodified 768.413 0.41300269 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 9 4 1 1 34.74 34.74 2 0.027106 8771 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.986 52.748 236.57 108.67 182.72 0 132.38 213.69 222 120 176 0 130 204 2 2 2 0 1 2 21679 1632 2295 1597 3856;3857 4445;4446 4446 2 APVADVEPK Unmodified 924.49165 0.49164694 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 5 0 1 48.339 48.339 2 0.018451 15182 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.435 23.408 0 58.679 54.127 66.102 91.292 85.873 0 56 56 65 93 83 0 1 1 1 1 1 3143.8 1633 3285 1598 3858 4447 4447 1 APVDGWYK Unmodified 934.45487 0.45486751 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 9.33 2.62 1 1 1 58.771 58.771 2 0.010684 18070 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.492 69.89 265.26 281.51 512.58 326.02 290.02 164.95 250 278 504 324 297 158 2 2 3 2 2 1 60513 1634 1783 1599 3859;3860;3861 4448;4449;4450 4449 3 APVEELDR Unmodified 927.46616 0.46616048 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7 Kalrn Kalirin yes no 0 0 0 0 2 0 1 44.839 44.839 2 0.028442 13818 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.248 43.91 9.4191 0 39.987 0 0 20.254 9 0 37 0 0 19 1 0 1 0 0 1 2565.4 1635 545 1600 3862 4451 4451 1 APVILTSGILMGAK Unmodified 1369.8003 0.80030791 2238 Q6PD31 Trak1 Trafficking kinesin-binding protein 1 yes yes 0 0 0 0 12 0 1 81.888 81.888 3 0.0032748 22646 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.448 29.708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1636 2238 1601 3863 4452 4452 1 APVISGVTK Unmodified 870.51747 0.51746776 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 52.694 52.694 2 2.8052E-05 17429 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 144.09 84.884 914.27 682.94 2433.4 795.22 1967.4 2535.6 861 716 2322 778 1958 2430 3 3 4 3 4 4 382270 1637 2291 1602 3864;3865;3866;3867;3868 4453;4454;4455;4456;4457 4457 5 APVITIPQSSVSPNVVIADLGLIR Unmodified 2458.4159 0.41590981 2475 Q8BX70 Vps13c Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 0 9 0 1 97.214 97.214 3 9.2161E-07 34804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.228 46.436 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1111.9 1638 2475 1603 3869 4458 4458 1 APVPASELLDAK Unmodified 1209.6605 0.66050319 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5.5 0.5 1 1 66.572 66.572 3 0.00048485 23031 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.289 38.12 78.858 64.289 36.97 68.842 0 0 74 66 37 65 0 0 2 2 1 2 0 0 5265.7 1639 3266 1604 3870;3871 4459;4460 4460 2 APVPTGEVYFADSFDR Unmodified 1769.8261 0.82606496 1523 P35564 Canx Calnexin yes yes 0 0 0 0 4.5 0.5 1 1 73.062 73.062 3 5.5637E-05 26740 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.485 58.851 29.034 0 59.285 46.071 0 39.442 28 0 56 47 0 37 2 0 1 2 0 1 14082 1640 1523 1605 3872;3873 4461;4462;4463 4461 3 APVSQPR Unmodified 753.41334 0.41333704 1847 P97379 G3bp2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 0 5 0 1 29.127 29.127 2 0.041565 6050 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.833 15.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1641 1847 1606 3874 4464 4464 1 APVYLFEQVQHNLLSPPFGWASGSQDSSSR Unmodified 3303.5949 0.59488982 496 A2AN08 Ubr4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 0 11 0 1 96.486 96.486 4 0.013759 31465 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 29.021 10.302 0 39.086 16.894 29.597 0 0 0 37 19 28 0 0 0 1 1 1 0 0 1046.5 1642 496 1607 3875 4465 4465 1 AQAALAVNISAAR Unmodified 1254.7044 0.70443369 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 7.33 4.64 1 1 1 54.946 54.946 2 0.0001703 12101 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.215 71.011 20.126 18.387 56.834 57.328 49.588 88.129 19 19 56 56 51 84 1 1 2 2 2 3 8909.8 1643 1826 1608 3876;3877;3878 4466;4467;4468 4468 3 AQAEAQQPVFNTLR Unmodified 1571.8056 0.80560429 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 53.73 53.73 3 0.049754 17744 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.193 6.8939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1644 3266 1609 3879 4469 4469 1 AQAEAQQPVFNTLRDELR Unmodified 2085.0603 0.060315431 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 5 0 1 62.403 62.403 3 0.010273 21900 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.382 21.993 29.93 0 19.094 29.466 0 20.254 28 0 19 28 0 19 1 0 1 1 0 1 2140.3 1645 3266 1610 3880 4470 4470 1 AQAELEAQELQR Unmodified 1384.6947 0.69465686 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 48.766 48.766 3 1.4083E-09 16013 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.65 72.918 0 0 0 40.299 7.5628 0 0 0 0 37 9 0 0 0 0 1 1 0 5516.5 1646 3266 1611 3881;3882 4471;4472 4472 2 AQAELESVSTALSEAESK Unmodified 1848.8953 0.89526674 1149 Q6URW6;K3W4R2 Myh14 Myosin-14 yes no 0 0 0 0 4 0 1 77.604 77.604 3 0.036278 28930 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 31.079 13.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1647 1149 1612 3883 4473 4473 1 AQAEVDR Unmodified 787.38243 0.38243085 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 2 0 1 25.688 25.688 2 0.015055 5169 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.71 24.157 73.146 82.038 80.27 95.304 82.992 136.21 69 83 83 93 88 130 1 1 1 1 1 1 26445 1648 2249 1613 3884 4474 4474 1 AQAEVEGLGK Unmodified 1000.5189 0.51892433 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 49.698 49.698 2 0.0010244 15807 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.096 34.115 0 48.359 34.986 48.193 0 0 0 46 37 46 0 0 0 1 1 1 0 0 3332.6 1649 3266 1614 3885 4475 4475 1 AQALDRDGNLVEDFVFDGGTGEIADR Unmodified 2779.3049 0.30491539 2774 Q91YP0 L2hgdh L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 0 0 0 1 4 0 1 81.494 81.494 4 0.0010562 30737 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.423 31.304 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1182 1650 2774 1615 3886 4476 4476 1 AQALQEECGYLR Unmodified 1436.6718 0.67181293 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 5 0 1 52.636 52.636 3 0.0096972 17212 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.12 32.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1651 1415 1616 3887 4477 4477 1 AQALVQYLEEPLTQVAAS Unmodified 1930.0048 0.004757612 670 D3YTS4;Q9JHS3 Lamtor2 Ragulator complex protein LAMTOR2 yes no 0 0 0 0 7 0 1 100.93 100.93 3 0.026762 36686 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.995 23.589 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 2778 1652 670 1617 3888 4478 4478 1 AQAQPIQLTDLFPGMTYTLR Unmodified 2263.1671 0.16708869 2354;20 A0A087WPX3;Q810U3 Nfasc Neurofascin no no 0 0 0 0 9 0 1 91.765 91.765 3 1.2316E-06 32533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.276 50.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1653 20;2354 1618 3889 4479 4479 1 AQASAISVGSR Unmodified 1045.5516 0.55162144 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 6 0 2 38.357 38.357 2;3 0.0038344 9865 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.721 25.913 0 87.309 123.66 45.404 100.64 115.45 0 84 121 46 102 111 0 2 2 1 2 2 10472 1654 3039 1619 3890;3891 4480;4481 4480 2 AQASAPAQAPK Unmodified 1038.5458 0.54580778 981 F6QL70;Q5M8M8;P47915 Gm17669;Rpl29 60S ribosomal protein L29 yes no 0 0 0 0 5.5 0.5 1 1 35.621 35.621 3 0.00014442 8581 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.961 64.846 69.067 92.639 35.396 38.331 29.288 39.442 65 92 37 37 28 37 2 2 1 1 1 1 6489.4 1655 981 1620 3892;3893 4482;4483 4483 2 AQASEVLLEELQQSFSQAK Unmodified 2105.0641 0.064063405 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 6 0 1 92.603 92.603 3 4.5465E-07 35069 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.21 54.509 0 20.216 0 30.092 27.237 19.477 0 19 0 28 28 19 0 1 0 1 1 1 761.33 1656 1198 1621 3894 4484 4484 1 AQATISVLQK Unmodified 1057.6132 0.61315906 1841 P97300 Nptn Neuroplastin yes yes 0 0 0 0 9 0 1 57.636 57.636 3 0.0053081 16669 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.836 33.806 0 48.944 0 0 37.054 47.979 0 46 0 0 37 46 0 1 0 0 1 1 5937.2 1657 1841 1622 3895 4485 4485 1 AQATISVLQKPR Unmodified 1310.767 0.76703394 1841 P97300 Nptn Neuroplastin yes yes 0 0 0 1 8.38 4.41 2 1 2 1 1 1 50.992 50.992 2;3;4 7.3423E-60 12026 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 207.95 156.88 1190.5 767.91 969.44 781.57 223.19 1171.6 1118 805 956 757 232 1105 7 6 5 5 3 8 186320 1658 1841 1623 3896;3897;3898;3899;3900;3901;3902;3903 4486;4487;4488;4489;4490;4491;4492;4493;4494 4491 9 AQATNGGSER Deamidation (N) 990.43665 0.43665126 2201 Q6NS60 Fbxo41 F-box only protein 41 yes yes 0 1 0 0 1 0 1 20.03 20.03 2 3.3589E-05 3039 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.75 75.036 6.3758 12.338 2.5223 29.144 11.531 12.463 6 12 3 27 12 12 1 1 1 2 1 1 3023.8 1659 2201 1624 3904 4495;4496 4496 883 2 AQATPSQPLQSSQPK Unmodified 1566.8002 0.80018457 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 42.268 42.268 3 9.9229E-08 11788 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.5 90.025 168.34 131.07 90.156 225.49 161.71 271.48 158 130 93 214 166 259 4 2 3 4 2 4 24335 1660 1983 1625 3905;3906;3907;3908 4497;4498;4499;4500 4498 4 AQAWCYSK Unmodified 1012.4437 0.44365089 1600 P51150 Rab7a Ras-related protein Rab-7a yes yes 0 0 0 0 8 0 1 50.961 50.961 2 0.0067232 14340 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.731 59.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1661 1600 1626 3909 4501 4501 1 AQAYQTGK Unmodified 865.42938 0.42938104 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 8.5 2.69 1 1 1 1 35.493 35.493 2 0.0042136 8620 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.21 76.145 179.68 0 98.079 217.27 214.11 136.22 168 0 93 204 213 130 4 0 2 3 2 2 17334 1662 1324 1627 3910;3911;3912;3913 4502;4503;4504;4505 4502 4 AQCGGGLLGVR Unmodified 1086.5604 0.56041199 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;Q8BS97 Vcan Versican core protein yes no 0 0 0 0 9.33 2.62 1 1 1 48.671 48.671 2 2.0801E-09 13294 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.05 85.769 277.76 162.98 67.089 165.79 154.71 85.648 260 167 65 158 158 83 3 2 1 2 2 1 27854 1663 851 1628 3914;3915;3916 4506;4507;4508 4507 3 AQDADDESAYAVQYRPEAEEYTEQAEAEHVEAAQR Unmodified 3968.7209 0.72089079 624 B2RUJ5 Apba1 Amyloid beta A4 precursor protein-binding family A member 1 yes yes 0 0 0 1 1 0 2 57.276 57.276 4;5 1.1343E-20 18262 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.986 63.118 0 38.901 27.962 0 19.564 9.0357 0 37 28 0 19 9 0 2 2 0 1 1 12021 1664 624 1629 3917;3918 4509;4510 4509 2 AQDGVELEK Acetyl (Protein N-term) 1029.4979 0.49785453 2516 Q8CAK3 UPF0515 protein C19orf66 homolog yes yes 1 0 0 0 1.5 0.5 1 1 55.206 55.206 2 0.0030076 18492 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.869 28.392 99.052 32.139 96.573 36.478 74.749 28.503 93 38 93 37 74 28 2 2 2 1 2 1 16559 1665 2516 1630 3919;3920 4511;4512 4512 2 AQDHESPR Unmodified 938.42061 0.42060727 213 A0A0R4J1W0;B2RXQ9;D3Z080 Sorbs2 yes no 0 0 0 0 2 0 1 15.772 15.772 3 0.0077531 2566 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.897 39.791 3.219 0 0 2.186 0 0 3 0 0 2 0 0 1 0 0 1 0 0 371.78 1666 213 1631 3921 4513 4513 1 AQDIEAGDGTTSVVIIAGSLLDSCTK Unmodified 2620.2902 0.29017653 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 6 0 1 92.371 92.371 3 0.00079825 34985 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.577 14.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1667 1824 1632 3922 4514 4514 1 AQDILAR Unmodified 785.43955 0.43955179 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 5.5 0.5 1 1 44.603 44.603 2 0.027049 12872 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.37 18.992 0 319.69 352.6 155.35 487.35 403.97 0 306 350 158 486 392 0 2 2 1 2 2 83935 1668 2253 1633 3923;3924 4515;4516 4516 2 AQDLDDLENTVATLR Unmodified 1672.8268 0.82679325 304 F6VG18;A0A1L1SSX7;Q9JHQ5;F6VTH5 Lztfl1 Leucine zipper transcription factor-like protein 1 yes no 0 0 0 0 4 0 1 76.527 76.527 3 0.00091953 28385 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.817 32.883 0 9.576 0 20.056 37.781 0 0 9 0 19 37 0 0 1 0 1 1 0 2420 1669 304 1634 3925 4517 4517 1 AQDPDQLR Unmodified 941.45666 0.45665842 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 3 0 1 34.163 34.163 2 0.0091508 9307 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.98 48.268 0 0 0 80.046 44.439 0 0 0 0 74 46 0 0 0 0 1 1 0 7891.6 1670 2845 1635 3926 4518 4518 1 AQDTAELFFEDVR Unmodified 1539.7205 0.72053726 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 6.67 4.5 1 1 1 75.975 75.975 2;3 1.2906E-13 28746 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 131.32 100.45 59.945 48.643 0 20.767 95.302 57.544 56 47 0 19 93 56 2 2 0 1 2 1 21486 1671 162 1636 3927;3928;3929 4519;4520;4521 4521 3 AQEAAAEEPPPAVTPAASVSALDLGEQR Unmodified 2774.3723 0.37226668 2987 Q9CXS4 Cenpv Centromere protein V yes yes 0 0 0 0 3 0 1 69.033 69.033 4 0.020406 25396 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 29.048 16.371 29.642 36.76 36.436 27.906 28.006 0 28 37 37 28 28 0 1 1 1 1 1 0 8393.2 1672 2987 1637 3930 4522 4522 1 AQEAEPPKSEESFR Unmodified 1603.7478 0.74781464 1121 H3BJZ7;Q4KUS2;H3BJL3 Unc13a Protein unc-13 homolog A yes no 0 0 0 1 3 0 1 40.966 40.966 3 0.00034359 12462 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.759 71.515 0 47.684 75.36 65.743 43.088 58.466 0 46 75 65 46 56 0 1 1 1 1 1 5478.2 1673 1121 1638 3931 4523 4523 1 AQEEPPAK Unmodified 868.42905 0.42904669 984 F6RJ39;Q9JIX8;B8JJ91;Q52KR6;B8JJ92;F6Q8C0 Acin1 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 0 3 0 1 34.892 34.892 3 0.030867 9789 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.418 33.215 0 48.944 0 29.902 37.328 0 0 46 0 28 37 0 0 1 0 1 1 0 3603.6 1674 984 1639 3932 4524 4524 1 AQEEWTTGAWK Unmodified 1305.599 0.59896556 3229 Q9JKD3 Scamp5 Secretory carrier-associated membrane protein 5 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 61.924 61.924 2;3 4.6321E-05 20181 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.04 65.316 167.03 203.67 126.92 282.57 206.34 320.31 157 204 130 269 213 306 3 4 2 4 2 4 64613 1675 3229 1640 3933;3934;3935;3936 4525;4526;4527;4528 4527 4 AQEFVNCK Acetyl (Protein N-term);Deamidation (N) 1037.4488 0.44879585 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 1 1 0 0 2 0 1 57.532 57.532 2 0.015064 19645 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.344 54.262 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 2994.6 1676 345 1641 3937 4529 4529 95 1 AQEFVNCK Acetyl (Protein N-term) 1036.4648 0.46478027 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 1 0 0 0 3.5 0.5 1 1 57.486 57.486 2 0.0063011 20116 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.268 51.462 0 154.55 174.89 140.65 45.566 186.32 0 148 176 139 46 176 0 2 2 2 1 2 24084 1677 345 1641 3938;3939 4530;4531 4530 2 AQEIALQNR Unmodified 1041.5567 0.55670682 1993 Q3ULD5 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 0 0 5 0 1 41.686 41.686 2 0.0054012 11946 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.647 60.124 80.031 33.193 46.576 17.991 0 0 75 37 46 19 0 0 1 1 1 1 0 0 2760.7 1678 1993 1642 3940 4532 4532 1 AQEIAPGDK Unmodified 927.46616 0.46616048 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 4.5 0.5 1 1 41.916 41.916 2;3 0.010442 12100 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.841 43.469 89.123 101.12 83.812 94.461 116.57 134.19 84 102 83 93 120 129 2 2 1 2 2 2 11748 1679 2952 1643 3941;3942 4533;4534 4534 2 AQEIDQTNDFK Unmodified 1307.5994 0.59935949 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 4 0 1 51.316 51.316 3 2.967E-08 16909 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.72 64.068 88.181 91.84 69.77 97.491 0 59.696 83 93 74 93 0 56 1 1 1 1 0 1 11134 1680 3202 1644 3943 4535 4535 1 AQEIFAK Unmodified 805.4334 0.43340378 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 7.5 0.5 1 1 54.65 54.65 2;3 0.030502 16681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.392 30.635 0 0 89.806 0 66.701 37.539 0 0 83 0 65 37 0 0 1 0 1 1 3125.8 1681 882 1645 3944;3945 4536;4537 4536 2 AQEILAR Unmodified 799.4552 0.45520186 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8 3.56 1 1 1 42.822 42.822 2 0.011135 12166 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.62 33.686 1308.7 1024.3 2108.6 1417.2 1961.1 1947.1 1232 1055 2070 1410 2001 1879 4 4 5 4 5 5 660800 1682 106 1646 3946;3947;3948 4538;4539;4540;4541;4542 4541 5 AQELDALDNSHPIEVSVGHPSEVDEIFDAISYSK Unmodified 3710.7588 0.75877985 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 5 0 1 84.873 84.873 5 1.9306E-06 32254 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.631 31.888 59.948 27.776 0 30.275 17.475 59.197 56 28 0 28 19 56 2 1 0 1 1 2 2782.2 1683 1899 1647 3949 4543;4544 4543 2 AQELEGLDVEYR Unmodified 1420.6834 0.68342347 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 3 0 1 62.022 62.022 2 1.3108E-06 22151 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.82 77.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1684 3358 1648 3950 4545 4545 1 AQENEQIGR Unmodified 1043.4996 0.49958587 261 A0A1B0GSA5;Q80Y98;A0A1B0GS27 Ddhd2 Phospholipase DDHD2 yes no 0 0 0 0 3 0 1 29.429 29.429 2 0.018302 7096 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.568 36.758 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 1298.6 1685 261 1649 3951 4546 4546 1 AQENYEGGEEVSPPQTK Unmodified 1861.833 0.83300084 1813 Q4FE56;P70398;G3UZS3 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 3 0 1 46.807 46.807 4 0.0043755 15098 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.068 24.99 0 23.927 32.612 12.939 22.314 33.475 0 23 32 14 23 32 0 1 1 1 1 1 2857.7 1686 1813 1650 3952 4547 4547 1 AQENYEQLQEQR Unmodified 1534.7012 0.7011988 1978 Q3UHB8 Ccdc177 Coiled-coil domain-containing protein 177 yes yes 0 0 0 0 2 0 1 41.307 41.307 2 0.025397 12461 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.092 25.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 894.15 1687 1978 1651 3953 4548 4548 1 AQETLQQLTSVLGLMESVK Unmodified 2074.098 0.09800607 3124 Q9DBG5 Plin3 Perilipin-3 yes yes 0 0 0 0 10.5 0.5 1 1 103.93 103.93 3 4.7483E-08 33399 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.987 61.909 0 8.512 0 0 0 6.396 0 8 0 0 0 6 0 1 0 0 0 1 4704.3 1688 3124 1652 3954;3955 4549;4550 4549 2 AQFEGIVTDLIK Unmodified 1332.7289 0.7289171 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8.2 2.48 1 2 1 1 84.383 84.383 2;3 2.6837E-06 31377 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.66 50.934 88.751 86.708 137.1 224.01 228.35 231.75 83 84 130 213 233 222 2 2 3 5 5 5 65036 1689 1533 1653 3956;3957;3958;3959;3960 4551;4552;4553;4554;4555;4556 4551 6 AQFEQLCASLLAR Unmodified 1505.766 0.76604767 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 9 1 1 1 74.556 74.556 2 1.6246E-10 25430 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.07 76.348 58.668 0 58.26 46.806 0 83.148 55 0 56 46 0 78 2 0 1 1 0 2 8726.9 1690 1581 1654 3961;3962 4557;4558 4557 2 AQFFLGTTNK Unmodified 1125.5819 0.58185894 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 0 11 0 1 64.669 64.669 3 0.011476 17555 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.268 22.181 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 8361.6 1691 3077 1655 3963 4559 4559 1 AQFFLGTTNKR Unmodified 1281.683 0.68296996 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 1 12 0 1 54.762 54.762 3 0.024132 12033 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.484 31.241 99.377 81.611 0 99.374 120.96 0 93 83 0 93 120 0 1 1 0 1 1 0 15350 1692 3077 1656 3964 4560 4560 1 AQFGQPEILLGTIPGAGGTQR Unmodified 2110.1171 0.11710203 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 8 1 1 1 77.941 77.941 3 1.0566E-13 27606 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.36 86.908 59.91 35.328 0 0 0 29.848 56 37 0 0 0 28 1 1 0 0 0 1 14746 1693 2401 1657 3965;3966 4561;4562 4561 2 AQFLVEK Unmodified 833.4647 0.46470391 1179 O35129;F6QPR1 Phb2 Prohibitin-2 yes no 0 0 0 0 9 0 1 58.51 58.51 2 0.015633 17184 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.94 52.79 325.83 277.26 366.91 0 333.9 267.63 307 287 356 0 328 260 1 1 1 0 1 1 15709 1694 1179 1658 3967 4563 4563 1 AQGEKPLAGAK Unmodified 1068.5928 0.59275797 2298;1040 Q80SW1;D3Z2Q0;F7ATQ6;A0A0N4SUY4;F8WGT1;Q68FL4;F8WI65;H3BKT5;H3BL31;D3YYM7;D3YX97 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 1 9 2.83 2 1 40.282 40.282 3;4 0.0003867 10283 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.925 56.981 1086.1 1377.5 1116.2 1382.3 1362.3 1492.2 1023 1381 1133 1349 1383 1432 5 6 5 6 5 5 60173 1695 2298;1040 1659 3968;3969;3970 4564;4565;4566;4567;4568;4569 4565 6 AQGLIEVER Acetyl (Protein N-term) 1055.5611 0.56112349 2564 Q8JZL3 Thtpa Thiamine-triphosphatase yes yes 1 0 0 0 2 0 1 61.476 61.476 2 0.02316 21471 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.794 17.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1696 2564 1660 3971 4570 4570 1 AQGLSNVK Unmodified 815.45012 0.45011648 1109 G5E8X1;Q9DCS2;E9Q7K5 0610011F06Rik UPF0585 protein C16orf13 homolog yes no 0 0 0 0 7.5 0.5 1 1 42.216 42.216 2 0.025604 10977 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.425 33.007 0 0 68.749 35.5 44.845 47.756 0 0 65 37 46 46 0 0 1 1 1 1 2592.8 1697 1109 1661 3972;3973 4571;4572 4571 2 AQGLTEEDIVFLPQPDK Unmodified 1898.9626 0.96255845 1175 O09114 Ptgds Prostaglandin-H2 D-isomerase yes yes 0 0 0 0 5.5 0.5 1 1 78.092 78.092 4 0.00019834 28509 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.589 35.208 39.349 47.031 19.355 0 48.494 19.437 37 47 19 0 47 19 2 2 1 0 2 1 5842.2 1698 1175 1662 3974;3975 4573;4574 4574 2 AQGPSGQEAESPR Unmodified 1312.6008 0.60075648 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4.75 4.82 1 1 1 1 28.129 28.129 2;3 7.2748E-16 6292 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 142.51 103.96 59.391 64.106 62.769 127.36 61.115 98.432 56 65 65 121 65 93 2 2 2 4 3 2 19564 1699 1275 1663 3976;3977;3978;3979 4575;4576;4577;4578 4576 4 AQGSVAFDYR Unmodified 1112.5251 0.52507234 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 48.472 48.472 2 0.003744 14628 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.24 56.251 148.22 97.315 72.86 176.86 70.685 155.75 139 102 74 167 74 148 2 2 1 2 1 2 15325 1700 2186 1664 3980;3981 4579;4580 4580 2 AQGVVLK Unmodified 713.44357 0.44357454 3090 Q9D898 Arpc5l Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 9.33 2.62 1 1 1 47.397 47.397 2 0.027317 14822 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.262 32.301 235.5 196.36 675.31 239.99 333.09 587.46 222 204 646 241 342 560 2 2 3 2 2 3 53214 1701 3090 1665 3982;3983;3984 4581;4582;4583 4583 3 AQGWQGLK Unmodified 886.4661 0.4661009 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 9 0 1 53.262 53.262 3 0.0095062 14659 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.265 32.892 0 0 70.33 0 58.576 0 0 0 65 0 56 0 0 0 1 0 1 0 3832.9 1702 2952 1666 3985 4584 4584 1 AQHEQYVAEAEEK Unmodified 1530.6951 0.69505079 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 2.67 0.471 1 2 40.664 40.664 3;4 9.5243E-05 12335 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.527 60.448 69.468 54.9 29.025 28.525 18.564 20.254 65 56 28 28 19 19 2 2 1 1 1 1 11274 1703 3358 1667 3986;3987;3988 4585;4586;4587 4587 3 AQHNEVER Unmodified 981.46281 0.46280643 846 E9PXC2;F6PWU6;E9Q722;F8WI12;Q61069;Q64705 Usf2;Usf1 Upstream stimulatory factor 1;Upstream stimulatory factor 2 yes no 0 0 0 0 1.5 0.5 1 1 17.344 17.344 3 0.00025164 2667 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 141.48 37.741 3.1578 11.197 17.58 2.8422 21.835 0 3 11 17 3 21 0 1 2 2 1 2 0 2118 1704 846 1668 3989;3990 4588;4589 4589 2 AQHSVSTEK Unmodified 985.48287 0.48287317 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 0 6 0.816 1 1 1 26.831 26.831 3 0.00063783 5081 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.261 64.036 48.88 85.956 7.446 24.178 27.509 68.505 46 84 9 23 28 65 2 2 1 1 1 2 7964.8 1705 3101 1669 3991;3992;3993 4590;4591;4592 4590 3 AQIHDLVLVGGSTR Unmodified 1464.8049 0.80487601 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 8 0 1 54.491 54.491 3 7.0727E-05 15999 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.856 49.896 39.468 46.283 0 40.441 0 59.696 37 46 0 37 0 56 1 1 0 1 0 1 8557.1 1706 1407 1670 3994 4593 4593 1 AQIITEK Unmodified 801.45962 0.45961853 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 7 0 1 48.551 48.551 2 0.03501 13805 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.279 9.0306 0 28.319 88.107 0 67.99 0 0 28 83 0 65 0 0 1 1 0 1 0 5032 1707 2886 1671 3995 4594 4594 1 AQILPIR Acetyl (Protein N-term) 851.52289 0.52288749 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 1 0 0 0 7.75 3.11 1 1 1 1 68.671 68.671 2 0.0011267 23383 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.669 94.669 0 38.321 28.19 7.7898 19.516 0 0 37 28 9 19 0 0 2 1 1 1 0 97956 1708 2185 1672 3996;3997;3998;3999 4595;4596;4597;4598;4599 4598 5 AQIQAQNPSIDVVYYNK Unmodified 1949.9847 0.98469087 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 6.5 0.5 1 1 65.169 65.169 2;3 4.5529E-09 22456 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.29 87.751 69.338 0 68.407 35.317 55.654 37.854 65 0 65 37 56 37 1 0 1 1 1 1 10517 1709 2730 1673 4000;4001 4600;4601 4600 2 AQIWDTAGQER Unmodified 1273.6051 0.60511357 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;G3UZL4 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 5 0 1 51.479 51.479 2 0.005695 16708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.408 34.036 59.747 0 57.363 65.725 101.06 76 56 0 56 65 102 74 1 0 1 1 1 1 5814.6 1710 1556 1674 4002 4602 4602 1 AQKPWAK Unmodified 827.46537 0.46537261 2133;3350 Q61644;Q9WVE8;Q3UP40 Pacsin1;Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 1;Protein kinase C and casein kinase substrate in neurons protein 2 no no 0 0 0 1 10 0 1 44.164 44.164 3 0.041145 9528 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.138 49.309 395.59 449 759.6 564.05 669.58 764.4 375 459 752 569 690 735 1 1 1 1 1 1 124650 1711 2133;3350 1675 4003 4603 4603 1 AQLAAITLIIGTFER Unmodified 1615.9297 0.92974218 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 13 0 1 103.85 103.85 3 0.0009954 42178 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.755 30.963 0 29.496 17.706 0 28.611 19.706 0 28 18 0 28 19 0 2 2 0 2 1 1629.5 1712 3174 1676 4004 4604;4605 4604 2 AQLADSFHLQQFFR Unmodified 1706.8529 0.85288884 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.67 1.7 1 1 1 74.485 74.485 3 8.6198E-12 24636 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.36 102.98 217.78 97.549 271.63 94.96 176.58 213.26 204 93 259 92 176 204 4 1 4 2 3 3 128430 1713 551 1677 4005;4006;4007 4606;4607;4608;4609;4610 4608 5 AQLEEASSAR Unmodified 1060.5149 0.51490158 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 6.25 3.96 1 1 1 1 35.765 35.765 2;3 5.0454E-76 9187 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 230.66 171.95 301.64 380.93 564.39 263.61 539.16 530.48 284 386 555 268 541 510 2 4 4 2 3 3 142900 1714 1557 1678 4008;4009;4010;4011 4611;4612;4613;4614;4615 4615 5 AQLEGHAVQSTLQSEEWFR Unmodified 2215.0658 0.065794739 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 5 0 2 65.496 65.496 3;4 3.8235E-08 23199 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.854 71.657 69.349 0 66.528 77.493 27.467 58.912 65 0 65 75 28 56 2 0 2 2 1 2 16142 1715 1415 1679 4012;4013 4616;4617 4616 2 AQLELFSQPLLVANAMK Unmodified 1872.0179 0.017905256 2508 Q8C729 Fam126b Protein FAM126B yes yes 0 0 0 0 10 0 1 90.908 90.908 3 2.6041E-06 29604 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.772 60.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1716 2508 1680 4014 4618 4618 1 AQLEQSVEENKER Unmodified 1558.7587 0.75871368 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 1 7.33 4.03 1 1 1 43.987 43.987 3 1.3113E-13 13527 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 129.29 95.542 39.342 195.16 161.01 74.885 165.27 0 37 185 158 74 158 0 1 2 2 1 2 0 25332 1717 2255 1681 4015;4016;4017 4619;4620;4621 4619 3 AQLFALTGVQPAR Unmodified 1370.767 0.76703394 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 8.75 4.6 1 1 1 1 69.65 69.65 2;3 9.1498E-07 19844 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.31 77.465 95.464 29.792 39.835 39.196 84.727 38.913 93 28 37 37 84 37 2 1 1 1 2 1 41149 1718 853 1682 4018;4019;4020;4021 4622;4623;4624;4625 4624 4 AQLGEDIR Unmodified 900.46649 0.46649483 3372 Q9Z1A1;B8JJG7;B8JJG8;B8JJG6;B8JJG9 Tfg yes no 0 0 0 0 4 0 1 42.795 42.795 2 0.022648 12791 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.679 28.118 48.475 83.748 77.493 60.961 0 0 46 83 79 60 0 0 1 1 1 1 0 0 21207 1719 3372 1683 4022 4626 4626 1 AQLGQDEGK Unmodified 944.45632 0.45632407 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4.5 0.5 1 1 39.521 39.521 2;3 0.0041313 10901 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.806 49.72 69.232 0 86.145 74.356 110.99 0 65 0 83 74 111 0 1 0 1 1 2 0 7163.9 1720 2105 1684 4023;4024 4627;4628 4628 2 AQLGVQAFADALLIIPK Unmodified 1767.0295 0.02945622 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 8.88 4.62 2 1 2 2 1 101.08 101.08 3;4 2.5904E-13 33323 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.355 74.928 92.846 58.001 58.992 14.837 0 30.584 87 61 56 14 0 29 4 5 3 2 0 3 12278 1721 1826 1685 4025;4026;4027;4028;4029;4030;4031;4032 4629;4630;4631;4632;4633;4634;4635;4636;4637;4638 4633 10 AQLIEEWANSVK Unmodified 1386.7143 0.71432967 1206 O35684 Serpini1 Neuroserpin yes yes 0 0 0 0 8 0 1 81.548 81.548 3 0.0030435 28747 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.802 33.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1722 1206 1686 4033 4639 4639 1 AQLLQPTLEINPR Unmodified 1491.8409 0.84092717 2936 Q9CQN1 Trap1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 0 8 0 1 67.484 67.484 3 0.0029742 22125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.136 13.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1723 2936 1687 4034 4640 4640 1 AQLLVVGSPGPVPHLELSDR Unmodified 2083.1426 0.1425885 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 8 0 2 72.414 72.414 3;4 3.2527E-11 24412 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.303 68.098 30.044 0 0 80.18 37.328 0 28 0 0 74 37 0 1 0 0 2 1 0 8018.6 1724 456 1688 4035;4036 4641;4642 4641 2 AQLQDLNDR Unmodified 1071.5309 0.530886 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 43.56 43.56 2 1.289E-06 12836 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 160.36 88.748 390.94 354.2 456.65 455.28 540.96 86.486 367 359 452 442 540 83 3 3 3 4 5 1 175200 1725 1329 1689 4037;4038;4039;4040;4041 4643;4644;4645;4646;4647 4645 5 AQLQNFVK Unmodified 946.52362 0.52361577 409 D4AFX6;A0A338P6P6;Q6ZQK5 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 8.5 0.5 1 1 57.464 57.464 2;3 0.014424 16659 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.451 32.616 0 38.447 55.11 46.993 0 20.254 0 37 55 46 0 19 0 1 1 1 0 1 2166 1726 409 1690 4042;4043 4648;4649 4649 2 AQMTNILQQIK Unmodified 1286.7017 0.70165649 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 10 0 1 71.46 71.46 2 0.0018958 21229 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.808 28.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1727 2363 1691 4044 4650 4650 1 AQMVQEDLEK Unmodified 1189.5649 0.56488824 1452 P26041 Msn Moesin yes yes 0 0 0 0 4 0 1 55.063 55.063 3 0.016453 18736 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.741 12.782 0 38.394 58.288 0 48.116 0 0 37 56 0 46 0 0 1 1 0 1 0 2290.7 1728 1452 1692 4045 4651 4651 1 AQNIPGDK Unmodified 841.42938 0.42938104 417 A0ZV96;Q8BHW2 Oscp1 Protein OSCP1 yes no 0 0 0 0 5 0 1 40.127 40.127 2 0.054829 11201 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.8 34.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1729 417 1693 4046 4652 4652 1 AQNTWGCGSSLR Unmodified 1335.599 0.59898234 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 7 0 1 44.177 44.177 2 0.015518 11819 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.79 23.703 20.195 38.006 0 9.4714 19.439 0 19 37 0 9 19 0 1 1 0 1 1 0 1675.2 1730 1580 1694 4047 4653 4653 1 AQNVPLPVSTLVEFVIAATDCTAK Unmodified 2543.3305 0.3305252 405 A0A338P692;A0A338P703;A0A338P7G1;A0A338P7H5;P29699 Ahsg Alpha-2-HS-glycoprotein yes no 0 0 0 0 10.5 0.5 1 1 117.73 117.73 4 0.00015249 35217 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.523 32.223 15.022 3.192 0 6 9.414 6.396 14 3 0 6 9 6 1 1 0 1 1 1 3290.9 1731 405 1695 4048;4049 4654;4655;4656 4654 3 AQNVTLEAILQNATSDNPVVQLSAVQAAR Unmodified 3020.5891 0.58907616 1188 O35344 Kpna3 Importin subunit alpha-4 yes yes 0 0 0 0 9 0 1 96.187 96.187 4 0.0073944 34430 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.186 20.77 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 2385.3 1732 1188 1696 4050 4657 4657 1 AQPAPKPEPSFSEYASVQVQR Unmodified 2315.1546 0.15460975 2224 Q6P6I8;E0CYM8;P97797;A0A0R4J1Z7;E0CX65;E9QPT7 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 55.844 55.844 3;4 8.6516E-11 18943 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.968 76.507 98.689 129.06 205.45 133.75 243.63 67.416 93 130 203 130 241 65 1 2 3 1 3 1 32535 1733 2224 1697 4051;4052;4053;4054 4658;4659;4660;4661 4661 4 AQPAPPELNSESEDYSPSSSETVR Unmodified 2576.1514 0.15143444 102 A0A0G2JGQ6;Q9JLM8;A0A0G2JE54;Q8CCN4 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 1.5 0.5 1 1 53.448 53.448 3 3.2305E-12 17658 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.678 62.858 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 5550.9 1734 102 1698 4055;4056 4662;4663 4663 2 AQPEHIISEGR Unmodified 1235.6258 0.62584901 2826 Q99J99 Mpst 3-mercaptopyruvate sulfurtransferase yes yes 0 0 0 0 3.5 0.5 1 1 36.514 36.514 3 0.0042279 10458 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.98 25.409 0 48.486 64.84 57.942 93.645 28.28 0 46 65 56 93 28 0 1 2 1 2 1 9255.3 1735 2826 1699 4057;4058 4664;4665 4664 2 AQPGPAPQPDVSLQQR Acetyl (Protein N-term) 1729.8747 0.87474649 1198 O35551;Q3U983 Rabep1 Rab GTPase-binding effector protein 1 yes no 1 0 0 0 2 0 1 53.435 53.435 2 0.0032625 17657 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.659 34.452 0 0 9.738 0 9.0934 9.3345 0 0 9 0 9 9 0 0 1 0 1 1 2537.6 1736 1198 1700 4059 4666 4666 1 AQPQDSR Unmodified 800.37768 0.37767982 1990 Q3UJB0 Sf3b2 yes yes 0 0 0 0 3 0 1 18.853 18.853 2 0.029762 2772 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.472 49.379 0 9.4227 9.1727 0 14.644 0 0 9 9 0 14 0 0 1 1 0 1 0 939.51 1737 1990 1701 4060 4667 4667 1 AQPQNLAR Unmodified 896.48281 0.48281359 2888 Q99PL6 Ubxn6 UBX domain-containing protein 6 yes yes 0 0 0 0 9 4 1 1 31.543 31.543 2 0.0052471 7143 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.19 67.419 89.714 27.663 46.811 66.704 82.444 38.142 84 28 46 65 83 37 2 1 1 2 2 1 6599.6 1738 2888 1702 4061;4062 4668;4669 4668 2 AQPSDNAPEK Unmodified 1055.4884 0.48835248 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 6.67 4.5 1 1 1 34.541 34.541 2;3 3.5452E-05 8629 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.61 90.304 218.25 126.93 0 128.07 239.66 190.37 204 130 0 120 241 185 3 2 0 2 3 3 24415 1739 1157;2210 1703 4063;4064;4065 4670;4671;4672 4672 3 AQPSQAAEEPAEK Unmodified 1354.6365 0.63647328 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 2.67 0.471 1 2 38.05 38.05 2;3 3.7516E-05 10966 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.253 76.055 9.657 38.915 54.332 97.789 33.063 108.04 9 37 56 93 37 102 1 1 2 3 2 2 14293 1740 3313 1704 4066;4067;4068 4673;4674;4675 4673 3 AQPSQAAEEPAEKADEPMEH Unmodified 2163.9379 0.93787661 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 1 1 0 1 43.644 43.644 3 3.8885E-10 12386 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.164 81 40.74 6.8289 0 0 0 0 38 9 0 0 0 0 1 1 0 0 0 0 6636.5 1741 3313 1705 4069 4676 4676 1 AQPSVSLGAAYR Unmodified 1218.6357 0.63568542 958 E9QL13;Q8C2Q3 Rbm14 RNA-binding protein 14 yes no 0 0 0 0 7 0 1 49.579 49.579 2 0.00093135 14263 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.513 41.752 0 39.064 18.214 0 0 39.442 0 37 19 0 0 37 0 1 1 0 0 1 1659.5 1742 958 1706 4070 4677 4677 1 AQQAADK Acetyl (Protein N-term) 772.37153 0.37153181 2696 Q8VDD5;F2Z494 Myh9 Myosin-9 yes no 1 0 0 0 1.5 0.5 1 1 32.883 32.883 2 0.020124 8067 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.039 57.54 109.09 71.38 106.19 203.56 172.78 57.12 102 74 102 195 176 56 1 1 1 2 2 1 27794 1743 2696 1707 4071;4072 4678;4679 4678 2 AQQACIEAK Unmodified 1017.4913 0.49132937 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 0 0 0 5 0 1 39.976 39.976 3 0.0043563 11215 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.076 23.771 39.202 45.545 45.191 37.052 37 0 37 46 46 37 37 0 1 1 1 1 1 0 6475.9 1744 3332 1708 4073 4680 4680 1 AQQALVQK Unmodified 884.50797 0.50796571 2937 Q9CQQ7;A0A0G2JGX3 Atp5f1 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 43.369 43.369 2 0.00020974 10720 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.52 85.283 197.82 91.555 217.35 148.81 0 78.884 186 102 213 148 0 74 2 2 2 2 0 1 28796 1745 2937 1709 4074;4075 4681;4682 4682 2 AQQEAEAAQR Unmodified 1100.521 0.52104959 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 4.5 4.92 1 2 1 26.441 26.441 2;3 6.7742E-10 5535 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 160.75 108.76 396.88 303.29 345.05 215.37 341.69 313.06 373 315 342 216 343 301 3 3 3 2 2 2 69478 1746 3039 1710 4076;4077;4078;4079 4683;4684;4685;4686 4684 4 AQQELEEQTR Unmodified 1230.584 0.58404378 1452 P26041 Msn Moesin yes yes 0 0 0 0 1.5 0.5 1 1 36.629 36.629 2 6.03E-05 9707 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.4 74.975 35.169 47.637 0 0 52.669 19.706 33 47 0 0 51 19 2 2 0 0 2 1 6941.8 1747 1452 1711 4080;4081 4687;4688 4687 2 AQQGVSSDWDADPDGGLSLEEFTR Unmodified 2579.1412 0.14120411 2193 Q6GQS1 Slc25a23 Calcium-binding mitochondrial carrier protein SCaMC-3 yes yes 0 0 0 0 4 0 1 78.054 78.054 3 5.9501E-07 29183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.432 46.929 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1403.8 1748 2193 1712 4082 4689 4689 1 AQQNNVEHK Unmodified 1066.5156 0.51557028 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 5 0 1 26.191 26.191 3 0.00088122 4767 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.624 36.017 0 38.93 26.228 38.878 0 39.442 0 37 28 37 0 37 0 1 1 1 0 1 1767.3 1749 996 1713 4083 4690 4690 1 AQQVAVQEQEIAR Unmodified 1468.7634 0.76340513 1170 O08917;G3UYU4 Flot1 Flotillin-1 yes no 0 0 0 0 3.5 0.5 1 1 45.173 45.173 2;3 1.3754E-20 14425 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152.64 103.27 39.464 0 59.112 28.752 37.381 0 37 0 56 28 37 0 1 0 2 1 1 0 11744 1750 1170 1714 4084;4085 4691;4692 4691 2 AQQVEAAER Unmodified 1000.4938 0.49377221 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 31.053 31.053 2 1.3521E-05 7532 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 150.53 54.718 162.6 123.64 158.49 94.855 115.82 155.53 153 129 158 93 120 149 2 2 2 1 2 2 19648 1751 3266 1715 4086;4087 4693;4694 4693 2 AQRPGSETR Unmodified 1000.505 0.5050056 2042 Q5DTT2 Psd PH and SEC7 domain-containing protein 1 yes yes 0 0 0 1 4 0 1 17.308 17.308 3 0.012198 2436 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.278 27.466 0 0 0 16 0 0 0 0 0 16 0 0 0 0 0 1 0 0 1997.9 1752 2042 1716 4088 4695 4695 1 AQSAQEPAVAQAVVEEAVATEAEEEEEGAK Unmodified 3069.4262 0.42621232 1918 Q3TES0;A0A0N4SWH8 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes no 0 0 0 0 1 0 1 84.42 84.42 4 1.3462E-08 29702 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.629 45.776 0 20.073 8.5336 0 19.564 9.0357 0 19 9 0 19 9 0 1 1 0 1 1 2813.6 1753 1918 1717 4089 4696 4696 1 AQSELAAHQK Unmodified 1081.5516 0.55162144 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 5.5 0.5 1 1 33.336 33.336 3 9.4186E-06 7946 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.86 70.727 78.667 150.24 115.57 133.48 91.376 185.01 74 148 121 130 93 176 1 2 2 2 1 2 15109 1754 3313 1718 4090;4091 4697;4698 4697 2 AQSELSGAADEAAR Unmodified 1374.6375 0.63753591 3060 Q9D3D9 Atp5d ATP synthase subunit delta, mitochondrial yes yes 0 0 0 0 3.83 4.14 1 3 1 1 41.362 41.362 2;3 3.0381E-81 12008 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 223.36 178.34 534.37 366.64 408.63 241.38 461.48 472.93 502 380 402 247 467 456 8 5 5 4 6 7 467900 1755 3060 1719 4092;4093;4094;4095;4096;4097 4699;4700;4701;4702;4703;4704;4705;4706 4706 8 AQSEYSR Unmodified 839.37735 0.37734547 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 3.5 0.5 1 1 24.005 24.005 2 0.027113 4589 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.064 65.446 117.66 122.76 137.66 107.25 21.663 38.824 111 125 139 106 23 37 2 2 2 2 1 1 38879 1756 2186 1720 4098;4099 4707;4708 4707 2 AQSGPVR Unmodified 713.38204 0.38203692 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 22.88 22.88 2 0.002353 3385 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.39 109.32 73.519 118.26 205.96 104.69 320.06 306.4 69 116 195 102 320 296 2 3 3 3 4 4 61280 1757 1536 1721 4100;4101;4102;4103 4709;4710;4711;4712;4713 4712 5 AQSPCFGDDDPAK Unmodified 1406.5772 0.57724384 3001 Q9CZC8;A0A0N4SWD0 Scrn1 Secernin-1 yes no 0 0 0 0 3.5 0.5 1 1 48.792 48.792 3 0.0009165 15671 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.377 45.498 39.414 125.36 43.579 76.412 99.545 105.89 37 121 46 74 102 102 1 2 1 2 2 2 12645 1758 3001 1723 4104;4105 4714;4715 4715 2 AQSPLLPEPLK Unmodified 1191.6863 0.68632401 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 9.33 2.62 1 1 1 65.783 65.783 3 6.0019E-06 23764 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.4 65.976 127.89 64.662 91.143 166.08 62.662 116.54 120 65 93 158 65 111 3 1 2 3 1 2 23626 1759 2295 1724 4106;4107;4108 4716;4717;4718 4718 3 AQSVLVPPGPDSFR Acetyl (Protein N-term) 1510.778 0.77799256 111 A0A0J9YTW6;B1AWN6;F7AMU5 Scn2a1 Sodium channel protein yes no 1 0 0 0 5 0 1 74.88 74.88 2 0.00026635 27638 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.809 26.585 0 20.216 0 0 27.631 48.248 0 19 0 0 28 46 0 1 0 0 1 1 3645.3 1760 111 1725 4109 4719 4719 1 AQSYAER Unmodified 823.38243 0.38243085 584 B1AT82;Q9D0M1 Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 0 4 0 1 26.918 26.918 2 0.037588 5467 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.219 56.45 24.679 0 0 20.332 23.124 0 23 0 0 19 23 0 1 0 0 1 1 0 2428.2 1761 584 1726 4110 4720 4720 1 AQTEEDDLQEPK Unmodified 1401.626 0.62596817 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 1.5 0.5 1 1 44.692 44.692 3 4.2032E-06 13850 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.19 60.968 64.011 45.296 23.672 0 37.714 28.772 60 47 23 0 37 28 2 2 1 0 1 1 9831.7 1762 3322 1727 4111;4112 4721;4722 4722 2 AQTEVDR Unmodified 817.393 0.39299553 1027 V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1;V9GX53;V9GXL1 Erc1 ELKS/Rab6-interacting/CAST family member 1 yes no 0 0 0 0 1.5 0.5 1 1 25.269 25.269 2 0.013706 4575 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.49 54.522 52.156 47.038 30.905 62.341 74.252 69.303 49 48 32 60 76 67 2 2 1 2 2 2 11920 1763 1027 1728 4113;4114 4723;4724 4723 2 AQTEWSAGTWR Unmodified 1291.5945 0.59454889 3235 Q9JKV5 Scamp4 Secretory carrier-associated membrane protein 4 yes yes 0 0 0 0 6 0 1 54.091 54.091 2 0.0048419 17303 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.385 47.056 0 0 29.056 27.825 55.668 47.447 0 0 28 28 56 46 0 0 1 1 1 1 4051.4 1764 3235 1729 4115 4725 4725 1 AQTLPTSVVTITSESSPGKR Unmodified 2058.0957 0.095697884 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 1 9.2 2.04 1 1 2 1 58.36 58.36 3;4 1.023E-38 17889 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.42 119.69 148.34 36.703 211.81 267.28 169.35 242.48 139 37 204 259 176 232 3 1 3 4 2 3 43823 1765 2148 1730 4116;4117;4118;4119;4120 4726;4727;4728;4729;4730 4727 5 AQTPIEEFTPTPAFPALQYLESVDEGGVAWR Unmodified 3418.6721 0.67213709 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 13 0 1 104.43 104.43 4 0.036466 42449 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 22.969 9.0734 9.657 0 0 0 29.288 0 9 0 0 0 28 0 1 0 0 0 1 0 1587.1 1766 732 1731 4121 4731 4731 1 AQTQPDDQAIQAGSTQGLQEGVLVR Unmodified 2609.3045 0.30452146 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 4 0 1 60.967 60.967 3 1.7738E-10 21404 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.707 51.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1767 692 1732 4122 4732 4732 1 AQVAQPGGDTIFGK Unmodified 1387.7096 0.70957864 567 B0R1E3;P70349 Hint1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 60.087 60.087 2;3 7.5721E-23 20968 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.31 102.28 492.32 532.28 678.81 435.88 660.05 726.07 465 537 676 430 674 698 3 3 3 2 4 3 101540 1768 567 1733 4123;4124;4125;4126 4733;4734;4735;4736 4736 4 AQVEDAFR Unmodified 934.45084 0.45084476 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 4 1 1 46.363 46.363 2 0.044618 14518 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.397 34.296 128.11 129.68 0 118.95 126.25 124.32 120 130 0 111 130 120 1 1 0 1 1 1 10154 1769 1412 1734 4127;4128 4737;4738 4737 2 AQVEQELTTLR Unmodified 1286.683 0.68302954 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 58.544 58.544 3 0.0057246 20273 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.034 24.635 9.6046 0 8.8037 19.886 18.961 0 9 0 9 19 19 0 1 0 1 1 1 0 2146.7 1770 3266 1735 4129 4739 4739 1 AQVLAGGR Unmodified 770.43989 0.43988615 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 36.386 36.386 2 0.00047349 7593 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 152.39 69.102 599.53 262.19 852.08 319.71 727.36 748.93 563 293 818 346 734 720 3 3 4 3 4 3 81244 1771 3397 1736 4130;4131;4132 4740;4741;4742;4743 4742 4 AQVLQLVAELEETR Unmodified 1597.8675 0.86753585 138 A0A0N4SW14;E6Y2W7;D3Z165;E6Y2W6;E9QP94;Q3TVA9 Ccdc136 Coiled-coil domain-containing protein 136 yes no 0 0 0 0 7 0 1 91.341 91.341 3 0.021328 33838 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.025 26.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1334 1772 138 1737 4133 4744 4744 1 AQVPFSSCLEAYGAPEQVDDFWSTALQAK Unmodified 3214.4917 0.49172988 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 9.4 3.01 1 1 1 2 96.423 96.423 3;4 1.1435E-12 38705 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.365 59.358 49.313 18.504 0 56.683 8.1267 74.388 46 18 0 52 9 70 2 2 0 3 1 4 11652 1773 1641 1738 4134;4135;4136;4137;4138 4745;4746;4747;4748;4749 4748 5 AQVQLDSDHLEEDIHR Unmodified 1903.9024 0.90241781 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 2 0.816 1 1 1 49.775 49.775 3;4 7.7549E-08 16510 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.38 96.957 44.555 27.611 62.443 13.38 76.086 58.629 42 28 60 14 74 56 2 1 2 1 2 2 59168 1774 154 1739 4139;4140;4141 4750;4751;4752;4753 4752 4 AQVSTLLTLLPPPVLK Unmodified 1689.044 0.044043652 888 E9Q2V5;Q3UTZ3 BC037034 Uncharacterized protein C7orf43 homolog yes no 0 0 0 0 5.4 5.39 3 2 95.91 95.91 3;4 4.0833E-08 27319 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.4 104.35 21.219 31.418 100.09 15.812 60.746 37.487 20 31 95 17 60 36 3 4 7 2 5 3 8831.9 1775 888 1740 4142;4143;4144;4145;4146 4754;4755;4756;4757;4758;4759;4760;4761 4759 8 AQVTGQSAR Unmodified 916.47264 0.47264284 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 7.75 3.11 1 1 1 1 25.024 25.024 2 0.00090464 4311 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.61 43.704 89.567 45.352 56.556 77.896 9.414 84.214 84 46 57 74 9 79 4 2 3 3 1 2 8557.4 1776 3002 1741 4147;4148;4149;4150 4762;4763;4764;4765 4762 4 AQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLR Unmodified 3690.9792 0.97921815 2780 Q91Z31;A0A0G2JGW0;Q3V328 Ptbp2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 0 11.2 0.748 1 2 2 87.812 87.812 4;5 6.2999E-09 24799 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.544 42.243 0 32.942 52.272 53.516 46.548 118.06 0 32 51 51 47 112 0 2 2 2 2 4 46836 1777 2780 1742 4151;4152;4153;4154;4155 4766;4767;4768;4769;4770;4771;4772 4772 7 AQVVVTVK Unmodified 842.52255 0.52255314 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 10.5 2.5 1 1 50.857 50.857 2 0.045657 14413 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.404 25.301 354.47 277.42 242.2 108.21 379.22 143.2 333 287 232 102 372 139 2 2 1 1 2 1 8717 1778 1018;2532 1743 4156;4157 4773;4774 4773 2 AQYEDIAQK Unmodified 1064.5138 0.51383895 2009 Q3UV17 Krt76 Keratin, type II cytoskeletal 2 oral yes yes 0 0 0 0 7 3.54 1 1 1 1 48.712 48.712 2;3 3.2917E-05 15466 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.02 73.982 256.38 145.6 396.3 132.65 181.44 243.2 241 157 381 139 185 231 3 3 4 2 3 3 37135 + 1779 2009 1744 4158;4159;4160;4161 4775;4776;4777;4778 4776 4 AQYEEIAQR Unmodified 1106.5356 0.53563702 662;651 CON__P48668;CON__P04259;CON__P02538;CON__P35908v2;CON__P35908 no no 0 0 0 0 4 0 1 41.934 41.934 3 0.0025923 12442 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.349 26.954 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2451.4 + 1780 651;662 1745 4162 4779 4779 1 AQYESLAAK Unmodified 979.49746 0.4974606 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 49.292 49.292 2;3 9.5894E-06 15664 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.28 87.239 493.74 509.19 582.4 296.37 600.05 405.81 464 519 581 297 600 392 2 3 3 2 3 2 86318 1781 1557 1746 4163;4164;4165;4166 4780;4781;4782;4783 4783 4 AQYYLPDGSTIEIGPSR Unmodified 1865.9159 0.9159426 1691 P61164 Actr1a Alpha-centractin yes yes 0 0 0 0 8.67 3.09 1 1 1 71.421 71.421 2;3 4.9746E-08 26579 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.089 44.082 0 57.86 39.499 0 9.414 39.442 0 55 37 0 9 37 0 2 1 0 1 1 13924 1782 1691 1747 4167;4168;4169 4784;4785;4786 4786 3 ARDDLITDLLNEAK Unmodified 1585.8312 0.83115034 1597 P50518;A0A0N4SW07;A0A0N4SW34 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 1 7.78 2.94 2 2 2 1 2 79.542 79.542 3;4 1.8787E-11 29230 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.92 84.705 553.84 553.46 526.95 606.87 654.65 715.22 519 556 527 593 666 686 7 9 7 9 8 9 148240 1783 1597 1748 4170;4171;4172;4173;4174;4175;4176;4177;4178 4787;4788;4789;4790;4791;4792;4793;4794;4795;4796;4797 4790 11 ARFEELNADLFR Unmodified 1479.747 0.74702678 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 1 13 0 1 63.356 63.356 3 0.00070889 22806 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.806 33.057 127.53 117.28 107.89 101.86 170 0 120 120 111 102 167 0 1 1 1 1 1 0 27896 1784 1397;1762 1749 4179 4798 4798 1 ARPDAEK Unmodified 785.40317 0.40316629 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 1 6 0 1 26.781 26.781 3 0.058872 4693 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.351 26.705 0 216.54 157.99 217.9 233.77 180.95 0 206 167 212 239 176 0 1 1 1 1 1 7266.4 1785 2971 1750 4180 4799 4799 1 ARPEVAQEEEPGVPDNR Unmodified 1891.9024 0.90241781 191 A0A1B0GSR5;A0A0R4J0W7;Q5XJV6 Lmtk3 Serine/threonine-protein kinase LMTK3 yes no 0 0 0 1 2 0 1 38.814 38.814 3 2.7368E-38 11314 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 153.56 129.73 0 20.216 0 0 28.291 29.041 0 19 0 0 28 28 0 1 0 0 1 1 2404.2 1786 191 1751 4181 4800 4800 1 ARPEYMLPVHFYGR Unmodified 1734.8664 0.86643041 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 10 2.16 1 1 1 57.021 57.021 4 9.312E-05 17343 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.908 8.9976 285.42 157.99 226.33 96.153 140.77 282.74 268 167 223 93 139 269 3 2 2 1 1 3 39458 1787 2555 1752 4182;4183;4184 4801;4802;4803 4801 3 ARPTTDSFDDYPPR Unmodified 1636.7481 0.74814899 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 4 0 1 43.93 43.93 3 0.00030452 13307 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.889 57.47 0 59.584 0 9.837 29.288 0 0 56 0 9 28 0 0 2 0 1 1 0 3870.3 1788 2377 1753 4185 4804;4805 4805 2 ASAAFSSVGSVITK Unmodified 1323.7034 0.70343063 750 D3Z637;D3Z125;E9PUA7;D3Z7X7;F8WHQ1;Q62393 Tpd52 Tumor protein D52 yes no 0 0 0 0 6.67 4.03 1 1 1 66.118 66.118 3 3.5171E-05 18698 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.746 54.627 78.633 140.69 113.89 183.86 91.622 76.27 74 139 121 176 93 74 1 2 2 2 1 1 19554 1789 750 1754 4186;4187;4188 4806;4807;4808 4808 3 ASAATEQR Unmodified 832.40389 0.40389457 1897 Q0VF59;Q8BJ42 Dlgap2 Disks large-associated protein 2 yes no 0 0 0 0 3.5 0.5 1 1 21.05 21.05 2 0.021629 3196 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.282 44.673 0 49.88 7.6394 40.563 27.425 0 0 47 9 38 28 0 0 2 1 2 2 0 3330.5 1790 1897 1755 4189;4190 4809;4810 4810 2 ASAELALGENNEVLK Deamidation (N) 1557.7886 0.78861683 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 1 0 0 3.67 0.471 1 2 66.637 66.637 3 1.239E-11 23986 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.09 97.736 20.265 37 60.49 0 65.015 86.623 19 37 56 0 65 83 1 1 2 0 2 2 20664 1791 1312 1756 4191;4192;4193 4811;4812;4813 4813 376;377 3 ASAELALGENNEVLK Unmodified 1556.8046 0.80460124 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 6.6 3.26 1 2 1 1 64.194 64.194 2;3;4 1.106E-32 22613 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 167.61 113.11 633.58 437.26 542.77 491.81 664.86 567.31 595 447 539 491 671 546 7 7 6 8 7 6 168940 1792 1312 1756 4194;4195;4196;4197;4198 4814;4815;4816;4817;4818;4819;4820;4821;4822 4816 9 ASAELDIKDVSDER Unmodified 1546.7475 0.74748029 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 6.67 4.5 1 1 1 53.574 53.574 3 0.00026104 17768 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.523 43.224 217.8 190.8 55.603 288.41 63.57 245.5 204 194 56 268 65 232 2 3 1 3 1 2 37682 1793 1382 1757 4199;4200;4201 4823;4824;4825 4825 3 ASAEQIEEEVTK Unmodified 1332.6409 0.64088996 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 2.5 0.5 1 1 59.468 59.468 2;3 0.00014357 20986 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.28 66.042 50.431 0 30.296 39.95 152.69 38.697 47 0 28 37 149 37 2 0 1 1 3 1 9159.9 1794 2105 1758 4202;4203 4826;4827;4828 4828 3 ASAFALQEQPVVNAVIDDATK Unmodified 2186.1219 0.12191263 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 7.33 2.62 1 2 2 1 84.552 84.552 3;4 1.6966E-11 31549 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.6 77.559 394.77 211.6 241.8 250.77 216.84 68.498 370 224 241 241 213 65 8 8 7 6 5 2 50477 1795 3049 1759 4204;4205;4206;4207;4208;4209 4829;4830;4831;4832;4833;4834;4835;4836;4837 4831 9 ASAFALQEQPVVNAVIDDATK Deamidation (N) 2187.1059 0.10592822 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 1 0 0 5 0 1 75.219 75.219 3 1.548E-10 27831 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.99 53.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1796 3049 1759 4210 4838 4838 1063 1 ASAFNSWFENAEEDLTDPVR Unmodified 2297.0237 0.023655153 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 91.765 91.765 3 3.8448E-11 34689 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.17 92.35 0 18.423 49.207 0 9.414 29.848 0 18 46 0 9 28 0 2 3 0 1 1 43404 1797 551 1760 4211;4212;4213;4214 4839;4840;4841;4842 4840 4 ASAGECLR Unmodified 862.3967 0.3967007 196 A0A0R4J124;O54781 Srpk2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 0 0 0 0 4 0 1 31.398 31.398 2 0.060759 7530 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.59 13.523 0 28.645 68.611 0 0 0 0 28 65 0 0 0 0 1 1 0 0 0 3954.4 1798 196 1761 4215 4843 4843 1 ASAGHAVSITQDDGGADDWETDPDFVNDVSEK Unmodified 3347.4338 0.43381689 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 3 0 1 69.388 69.388 4 6.4194E-15 25563 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.733 63.247 20.019 27.802 38.265 0 0 20.254 19 28 37 0 0 19 1 1 1 0 0 1 8638.5 1799 2075 1762 4216 4844 4844 1 ASALACLK Unmodified 832.44767 0.44767364 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 55.568 55.568 2;3 0.0011914 15829 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 136.11 67.198 1120.2 825.49 1106 263.09 761.99 1124.2 1054 860 1084 264 763 1075 4 3 4 2 2 4 117930 1800 2433 1763 4217;4218;4219;4220 4845;4846;4847;4848 4846 4 ASALCDR Unmodified 791.35959 0.35958691 2211 Q6P1F6;Q9CWU3;Q6ZWR4 Ppp2r2a;Ppp2r2b Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform yes no 0 0 0 0 4 0 1 32.836 32.836 2 0.064148 8159 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.789 6.6516 49.203 30.73 0 39.217 65.081 32.255 46 32 0 37 65 32 1 1 0 1 1 1 3386.5 1801 2211 1764 4221 4849 4849 1 ASALEQFVNSVR Acetyl (Protein N-term) 1361.6939 0.69392858 1269 O88543;D3Z036 Cops3 COP9 signalosome complex subunit 3 yes no 1 0 0 0 9.5 3.5 1 1 93.491 93.491 2 1.5773E-11 37254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.434 41.716 20.387 19.729 29.112 0 0 29.848 19 19 28 0 0 28 1 1 1 0 0 1 8952.8 1802 1269 1765 4222;4223 4850;4851 4851 2 ASALIDRPAPYFER Unmodified 1604.8311 0.83109076 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 8.5 2.69 1 1 1 1 56.696 56.696 3 6.3984E-11 18643 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.9 83.47 316.68 141.9 277.42 95.025 181.1 314.25 297 148 269 93 176 296 3 2 3 1 2 3 66369 1803 369;3345 1766 4224;4225;4226;4227 4852;4853;4854;4855 4852 4 ASAPATPLSPTR Unmodified 1167.6248 0.62478638 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 6 0 1 43.421 43.421 2 2.6248E-09 12272 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.597 62.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1804 1379 1767 4228 4856 4856 1 ASAPNPGK Unmodified 740.3817 0.38170256 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 33.847 33.847 2 0.021727 7014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.127 50.699 0 29.792 0 40.441 0 0 0 28 0 37 0 0 0 1 0 1 0 0 1671.7 1805 3391 1768 4229;4230 4857;4858 4858 2 ASASAQPAALSAEQAK Acetyl (Protein N-term) 1541.7686 0.76855009 1178 O35127 Grcc10 Protein C10 yes yes 1 0 0 0 3.5 0.5 1 1 52.85 52.85 2;3 5.0043E-33 17920 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.632 57.781 0 38.773 35.562 48.158 0 49.036 0 37 37 46 0 46 0 1 1 1 0 1 10205 1806 1178 1769 4231;4232 4859;4860 4859 2 ASASYHISNLLEK Acetyl (Protein N-term) 1473.7464 0.74635808 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 1 0 0 0 6.5 0.5 1 1 66.837 66.837 2 3.6991E-08 22481 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.676 33.117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1807 2264 1770 4233;4234 4861;4862 4862 2 ASAVGER Unmodified 688.3504 0.35040244 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 4 0 1 24.511 24.511 2 0.026678 4426 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.139 24.949 0 24.472 0 30.604 0 0 0 23 0 28 0 0 0 1 0 1 0 0 7535.6 1808 1420 1771 4235 4863 4863 1 ASAYNNLK Unmodified 879.44503 0.4450311 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 43.601 43.601 2 1.646E-16 11675 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 186.09 114.37 481.43 30.488 32.569 270.57 357.46 400.21 449 32 32 250 361 385 4 1 1 2 3 3 41682 1809 3376 1772 4236;4237;4238;4239 4864;4865;4866;4867 4864 4 ASAYVFASPGCK Unmodified 1256.586 0.58595803 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 9.5 0.5 2 2 57.733 57.733 2;3 1.765E-05 16836 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.39 55.713 0 206.12 81.589 30.604 112.15 144.97 0 195 83 28 111 139 0 2 1 1 1 2 15782 1810 255;3362 1773 4240;4241;4242;4243 4868;4869;4870;4871 4868 4 ASCALETVWEDR Unmodified 1435.6402 0.64017845 203 A0A0R4J1E2;D3Z356;Q9CVV2;E9PUM6 Eef1d yes no 0 0 0 0 4 0 1 66.162 66.162 2 0.063844 23671 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.955 19.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1811 203 1774 4244 4872 4872 1 ASDADTANVTIVNVR Unmodified 1544.7794 0.77944912 3406 yes no 0 0 0 0 9 0 1 81.169 81.169 2 0.0052208 27928 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.353 27.148 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 6908.4 + 1812 3406 1775 4245 4873 4873 1 ASDAGVYR Unmodified 837.39808 0.39808091 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q8BS97 Vcan yes no 0 0 0 0 3.5 0.5 1 1 32.426 32.426 2 0.032377 8476 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.919 35.039 167.21 71.428 81.316 84.388 78.955 116.07 162 74 83 83 83 111 2 1 1 1 1 1 34989 1813 851 1776 4246;4247 4874;4875 4874 2 ASDDSSSELDEEYLIELEK Unmodified 2170.9641 0.96413417 478 A2AJK8;Q91Z38 Ttc1 Tetratricopeptide repeat protein 1 yes no 0 0 0 0 3 0 1 78.742 78.742 3 1.7899E-11 29796 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.894 60.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1814 478 1777 4248 4876 4876 1 ASDEVTR Unmodified 776.36645 0.36644643 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 2 0 1 25.377 25.377 2 0.032734 5195 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.097 23.449 118.12 89.483 90.024 104.1 107.37 115.26 111 93 93 102 111 111 1 1 1 1 1 1 18528 1815 2182 1778 4249 4877 4877 1 ASDFLLLLNK Unmodified 1132.6492 0.64921022 3162 Q9EPK2 Rp2 Protein XRP2 yes yes 0 0 0 0 10 0 1 87.154 87.154 3 0.0026163 27997 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.65 7.1006 20.149 0 39.932 0 0 0 19 0 37 0 0 0 1 0 1 0 0 0 2685 1816 3162 1779 4250 4878 4878 1 ASDLDGDLTATR Unmodified 1233.5837 0.58370943 1886 Q05186 Rcn1 Reticulocalbin-1 yes yes 0 0 0 0 3 0 1 49.961 49.961 2 0.00014679 16680 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.095 67.951 49.358 0 0 0 65.675 67.416 46 0 0 0 65 65 1 0 0 0 1 1 3071.7 1817 1886 1780 4251 4879 4879 1 ASDPPLAPDDDPDAPAAQLAR Unmodified 2101.9916 0.99162674 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 3.75 3.6 1 3 2 1 1 59.594 59.594 3;4 7.8342E-23 19251 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 128.38 111.7 64.153 157.77 92.769 177.21 279.91 67.678 60 149 94 171 274 64 3 6 5 8 7 3 158120 1818 3268 1781 4252;4253;4254;4255;4256;4257;4258;4259 4880;4881;4882;4883;4884;4885;4886;4887;4888;4889;4890 4880 11 ASDPSPATPDSESVIVAMER Unmodified 2057.9575 0.95754942 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 3 0 1 64.911 64.911 3 0.022861 23421 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.702 22.506 49.186 0 28.859 58.988 26.577 78.126 46 0 28 56 28 74 2 0 1 2 1 2 1904 1819 1083 1782 4260 4891;4892 4891 2 ASDPSSSLR Unmodified 918.44067 0.44067401 755 D3Z2E3;F6R6F1;E9Q632;O54916 Reps1 RalBP1-associated Eps domain-containing protein 1 yes no 0 0 0 0 4 0 1 33.855 33.855 2 0.0012096 8615 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.39 34.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1820 755 1783 4261 4893 4893 1 ASDSGLYR Unmodified 867.40865 0.4086456 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 13 0 1 35.29 35.29 2 0.034586 9120 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.905 13.89 138.7 0 132.18 174.65 0 197.21 130 0 130 167 0 185 1 0 1 1 0 1 16342 1821 144 1784 4262 4894 4894 1 ASDSGPSSSSSSSSSPPR Unmodified 1665.7078 0.70780032 3267 Q9QXS6 Dbn1 Drebrin yes yes 0 0 0 0 5.5 4.39 1 1 1 1 26.222 26.222 2;3 3.1897E-10 5464 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.492 64.802 20.134 47.129 27.367 0 28.601 20.005 19 46 28 0 28 19 1 2 2 0 2 1 11093 1822 3267 1785 4263;4264;4265;4266 4895;4896;4897;4898 4895 4 ASDSPIDLFYGDFVGDISEAVIQK Unmodified 2585.2537 0.25371467 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 7.88 3.1 2 2 1 1 2 107.6 107.6 3;4 1.3878E-22 36446 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.16 104.14 18.197 39.159 35.1 18.457 34.994 54.826 17 38 34 18 35 53 3 5 3 4 7 5 31304 1823 3307 1786 4267;4268;4269;4270;4271;4272;4273;4274 4899;4900;4901;4902;4903;4904;4905;4906;4907;4908 4900 10 ASDTSITWNNLK Unmodified 1348.6623 0.6622941 2797 Q921I1;E9Q035;F7BAE9;F7CJN9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 10 3 1 1 62.722 62.722 3 0.00018171 20626 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.692 49.393 88.405 88.312 109.92 88.844 203.75 161.55 83 83 102 83 204 157 1 1 1 1 2 2 12190 1824 2797 1787 4275;4276 4909;4910 4909 2 ASEAAVK Unmodified 674.3599 0.35990449 1983 Q3UHJ0;Q91ZK0 Aak1;Tfap2d AP2-associated protein kinase 1;Transcription factor AP-2-delta yes no 0 0 0 0 6 0 1 35.202 35.202 2 0.058024 8247 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.415 36.77 48.773 65.152 43.05 57.634 53.601 67.76 46 65 46 56 56 65 1 1 1 1 1 1 9563.6 1825 1983 1788 4277 4911 4911 1 ASEAGEVPFNHEILR Unmodified 1667.8267 0.82673367 739 O88545;D3Z0F5;F6QK86 Cops6 COP9 signalosome complex subunit 6 yes no 0 0 0 0 6.25 3.96 1 1 1 1 53.508 53.508 3 1.6801E-05 18023 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.5 80.874 177.44 195.38 129.26 153.81 71.444 128.26 167 195 130 149 74 121 4 3 2 3 2 2 29194 1826 739 1789 4278;4279;4280;4281 4912;4913;4914;4915 4913 4 ASEDFVDPWTVR Unmodified 1420.6623 0.6622941 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 4.5 0.5 1 1 70.118 70.118 3 0.00047219 25421 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.498 42.511 29.8 20.216 40.966 29.902 37.328 0 28 19 38 28 37 0 1 1 1 1 1 0 6191.8 1827 1506 1790 4282;4283 4916;4917 4916 2 ASEDVEYTLR Unmodified 1181.5564 0.55643205 1985 Q3UHK1 Slc2a13 Proton myo-inositol cotransporter yes yes 0 0 0 0 3 0 1 49.208 49.208 2 0.048353 16307 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.278 21.049 44.883 36.342 0 25.139 0 54.366 42 37 0 23 0 51 1 1 0 1 0 1 2534.4 1828 1985 1792 4284 4918 4918 1 ASEEHLK Unmodified 812.40283 0.40283194 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 0 4 0.816 1 1 1 32.262 32.262 3 0.0054373 7344 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.602 34.943 452.98 310.83 264.72 343.78 641.44 477.39 425 325 269 340 644 465 2 3 1 3 3 3 78510 1829 866 1793 4285;4286;4287 4919;4920;4921 4921 3 ASEGASIPSPVVR Acetyl (Protein N-term) 1310.683 0.68302954 3195 Q9ESN6;D3YY69;D3YTN5 Trim2 Tripartite motif-containing protein 2 yes no 1 0 0 0 2 0 1 57.373 57.373 2 0.00010338 19464 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.283 24.743 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 3349.2 1830 3195 1794 4288 4922 4922 1 ASENAIVWK Unmodified 1016.5291 0.52909508 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 10.7 3.3 1 2 57.631 57.631 2;3 0.001274 19879 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.01 55.59 394.51 203.56 427.85 231.18 108.7 492.59 371 204 412 233 111 465 4 3 3 2 1 4 43332 1831 1836 1795 4289;4290;4291 4923;4924;4925;4926 4925 4 ASEPAGGPR Unmodified 840.40898 0.40897995 228 E9Q5Q0;Q3TGG2;A0A0U1RPL0;Q7TQH0;J3QP59 Atxn2l Ataxin-2-like protein yes no 0 0 0 0 3 0 1 25.185 25.185 2 0.013606 5187 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.856 24.974 39.59 0 18.644 38.476 45.368 28.553 37 0 19 37 46 28 1 0 1 1 1 1 2603 1832 228 1796 4292 4927 4927 1 ASEQEEVGGPEGSEALQPR Unmodified 1968.9025 0.90247739 3047 Q9D1X0 Nol3 Nucleolar protein 3 yes yes 0 0 0 0 1.5 0.5 1 1 46.672 46.672 3 3.0849E-20 13748 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.87 105.22 39.701 0 0 41.534 0 9.594 37 0 0 38 0 9 2 0 0 2 0 1 20065 1833 3047 1797 4293;4294 4928;4929 4928 2 ASEQIYGSPSSSPYECLR Unmodified 2029.9051 0.90511992 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 4 0 1 56.714 56.714 3 2.9131E-05 19463 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.202 34.588 20.176 7.7323 28.906 18.509 28.438 0 19 9 28 19 28 0 1 1 1 1 1 0 5107.4 1834 895 1798 4295 4930 4930 1 ASETEENGSDSFMHSMDPQLER Deamidation (N) 2497.0009 0.0009471551 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 1 0 0 1.75 0.661 3 4 1 59.921 59.921 3;4 1.0387E-14 19191 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.881 77.22 50.201 39.945 137.55 114.6 91.694 127.56 47 38 131 112 94 122 2 2 4 6 5 5 26734 1835 118;1534 1799 4296;4297;4298;4299;4300;4301;4302;4303 4931;4932;4933;4934;4935;4936;4937;4938;4939 4931 50 9 ASETEENGSDSFMHSMDPQLER Unmodified 2496.0169 0.01693157 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 2.5 0.5 1 1 58.863 58.863 3;4 8.4312E-05 20005 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.202 42.49 9.535 0 30.248 0 19.874 29.848 9 0 28 0 19 28 1 0 2 0 1 1 3704.2 1836 118;1534 1799 4304;4305 4940;4941 4941 2 ASETLTAQ Unmodified 819.39741 0.39741221 1870 Q00623 Apoa1 Apolipoprotein A-I;Proapolipoprotein A-I;Truncated apolipoprotein A-I yes yes 0 0 0 0 3 0 1 41.959 41.959 2 0.0051987 12929 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.28 93.293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1837 1870 1800 4306 4942 4942 1 ASEWVQQVSGLMDGK Unmodified 1633.777 0.77700628 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 82.922 82.922 3 0.00070194 29405 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.862 41.03 39.516 36.703 0 40.441 0 0 37 37 0 37 0 0 1 1 0 1 0 0 4843.9 1838 2382 1801 4307 4943 4943 1 ASFITPVPGGVGPMTVAMLMQSTVESAQR Unmodified 2961.4762 0.47621994 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 11.5 0.5 1 1 103.99 103.99 3;4 1.9284E-08 29082 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.349 46.153 0 0 4.8975 11.505 12.024 0 0 0 5 11 12 0 0 0 1 1 1 0 3125 1839 2804 1802 4308;4309 4944;4945 4945 2 ASFNNPDR Unmodified 919.41479 0.41479361 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 8 3.56 1 1 1 34.266 34.266 2 0.0053467 8502 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.74 69.925 118.03 158.32 46.205 96.369 134.33 193.38 111 157 46 93 139 185 3 3 1 3 3 3 25319 1840 1621 1804 4310;4311;4312 4946;4947;4948 4948 3 ASFSQGPINSANR Unmodified 1347.6531 0.6531264 1146 J3QP56;P97823;D3YUG4 Lypla1 Acyl-protein thioesterase 1 yes no 0 0 0 0 7 0 1 44.57 44.57 2 0.0046579 12036 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.408 36.848 0 0 0 0 19.564 9.0357 0 0 0 0 19 9 0 0 0 0 1 1 1520.3 1841 1146 1805 4313 4949 4949 1 ASGANYSFHK Unmodified 1080.4989 0.49885759 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7 0 1 41.334 41.334 3 0.021159 10411 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.352 17.265 63.712 63.893 58.062 60.677 76.7 91.619 60 65 60 60 79 88 1 1 1 1 1 1 9041 1842 2154 1807 4314 4950 4950 1 ASGAPPGGQQR Unmodified 1024.505 0.5050056 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 6.12 2.85 1 1 2 2 1 1 23.277 23.277 2;3 1.7954E-16 3719 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 168.25 103.83 713.42 384.85 707.17 392.97 489.81 834.85 670 395 686 380 498 795 11 10 13 8 9 15 98073 1843 1282 1808 4315;4316;4317;4318;4319;4320;4321;4322 4951;4952;4953;4954;4955;4956;4957;4958;4959;4960;4961;4962;4963;4964;4965;4966;4967;4968;4969 4957 19 ASGGPSVFQKPVR Unmodified 1328.7201 0.72008375 778 D3Z5P0;Q5RJI5 Brsk1 Serine/threonine-protein kinase BRSK1 yes no 0 0 0 1 10 0 1 46.743 46.743 3 0.00031197 10417 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.274 68.802 69.451 0 49.422 0 58.576 0 65 0 46 0 56 0 1 0 1 0 1 0 4394.5 1844 778 1809 4323 4970 4970 1 ASGHPGDPESQQR Unmodified 1364.6069 0.60690449 1450 P26039 Tln1 Talin-1 yes yes 0 0 0 0 2 0 1 21.941 21.941 3 0.00016267 3791 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.54 48.342 0 5.2418 4.6772 9.3893 8.9827 0 0 5 5 9 9 0 0 1 1 1 1 0 1064.1 1845 1450 1810 4324 4971 4971 1 ASGLAAGK Unmodified 673.37589 0.3758889 2183 Q64737;A0A338P6X4;D6RCG1 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 7 0 1 39.792 39.792 2 0.014553 9810 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.212 37.363 49.008 0 58.766 35.452 79.033 57.441 46 0 56 37 79 56 1 0 1 1 1 1 3154.8 1846 2183 1811 4325 4972 4972 1 ASGLLFVPNILAR Unmodified 1369.8082 0.80817048 1161 O08600 Endog Endonuclease G, mitochondrial yes yes 0 0 0 0 12 0 1 86.131 86.131 2 1.6663E-08 24104 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.445 61.617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1847 1161 1812 4326 4973 4973 1 ASGLVPNVVVLVATVR Unmodified 1592.9614 0.96137665 2023 Q3V3R1 Mthfd1l Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 88.581 88.581 3 8.9725E-05 28338 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.52 42.322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1848 2023 1813 4327;4328 4974;4975 4974 2 ASGNAQIGK Acetyl (Protein N-term);Deamidation (N) 887.43486 0.43486035 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 1 1 0 0 3 0 1 43.749 43.749 2 0.0014282 13756 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.48 44.002 78.476 62.146 103.01 72.519 118.24 114.95 74 65 102 74 120 111 1 1 1 1 1 1 25949 1849 2116 1814 4329 4976 4976 821 1 ASGNAQIGK Acetyl (Protein N-term) 886.45084 0.45084476 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 1 0 0 0 5 0 1 41.185 41.185 2 4.2412E-92 11720 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.71 70.778 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1850 2116 1814 4330 4977 4977 1 ASGNLETK Unmodified 818.4134 0.41339662 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 8 3.56 1 1 1 37.413 37.413 2 0.0034053 10026 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.35 48.94 423.34 585.53 691.04 871.7 336.26 779.24 397 588 709 841 375 740 1 3 3 3 2 3 62467 1851 1141 1815 4331;4332;4333 4978;4979;4980 4978 3 ASGNYATVISHNPETK Unmodified 1687.8166 0.81656291 1757 P62918 Rpl8 60S ribosomal protein L8 yes yes 0 0 0 0 5.5 0.5 1 1 46.417 46.417 3 0.00016938 14288 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.335 46.496 59.513 37.433 64.838 66.129 55.909 0 56 37 65 65 56 0 2 1 2 2 1 0 7012.2 1852 1757 1816 4334;4335 4981;4982 4981 2 ASGPIDHYR Unmodified 1014.4883 0.4882929 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6 0 1 31.941 31.941 3 6.6535E-06 6898 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.69 89.734 69.468 54.9 0 48.687 84.582 0 65 56 0 46 83 0 1 1 0 1 1 0 9718 1853 2479 1817 4336 4983 4983 1 ASGPPSSETQEEFVDDFR Unmodified 1996.865 0.86502925 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RAY2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 2.5 0.5 1 1 62.646 62.646 3 2.2542E-07 22362 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.253 64.42 29.844 18.709 17.789 9.2842 28 20.254 28 19 18 9 28 19 2 1 2 1 1 1 10381 1854 761 1818 4337;4338 4984;4985;4986 4986 3 ASGQAFELILSPR Unmodified 1387.746 0.74596415 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 0 10.2 2.32 2 1 2 72.665 72.665 2;3 1.0625E-05 27142 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.55 51.76 148.54 245.95 85.167 88.648 311.13 261.19 139 240 83 83 306 251 3 5 2 1 4 4 112490 1855 1619 1819 4339;4340;4341;4342;4343 4987;4988;4989;4990;4991;4992 4992 6 ASGQPQSAAASGDK Unmodified 1273.5899 0.58985744 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 7.33 4.03 1 1 1 32.551 32.551 3 0.00015919 7557 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.878 44.219 148.29 137.43 27.923 69.528 80.665 194.91 139 139 28 65 83 185 3 3 1 1 1 3 20065 1856 3453 1820 4344;4345;4346 4993;4994;4995 4994 3 ASGTGGLSLLPPPPGGK Unmodified 1504.8249 0.82494275 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 10 2.16 1 1 1 66.806 66.806 3;4 3.4699E-07 21212 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.652 54.435 267.47 63.732 368.02 172.28 145.39 219.6 251 65 352 167 139 206 2 1 3 1 2 1 139710 1857 2960 1821 4347;4348;4349 4996;4997;4998 4997 3 ASGTNDKPGGPHYILR Unmodified 1681.8536 0.85361712 2548 Q8CHT0 Aldh4a1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 0 1 8 0 1 40.402 40.402 4 0.00091027 9390 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.755 37.024 78.354 107.14 85.332 68.702 86.597 66.819 74 107 88 69 88 65 1 1 1 1 1 1 1852.9 1858 2548 1822 4350 4999 4999 1 ASGTVNIR Unmodified 816.44537 0.44536545 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 6 0 1 34.508 34.508 2 0.050541 8061 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.419 23.151 0 0 0 0 56.581 58.081 0 0 0 0 56 56 0 0 0 0 1 1 2859.7 1859 3032 1823 4351 5000 5000 1 ASGVAVSDGVIK Acetyl (Protein N-term) 1143.6136 0.61355299 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 1 0 0 0 5.83 3.34 1 2 1 1 1 62.347 62.347 2 1.672E-27 22106 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.17 56.465 1696.7 1706.2 439.94 1250.4 1455.6 2004.4 1591 1716 435 1193 1488 1913 7 7 3 7 7 6 888860 1860 1410 1824 4352;4353;4354;4355;4356;4357 5001;5002;5003;5004;5005;5006;5007;5008 5003 8 ASGVDQR Unmodified 731.35622 0.3562161 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 4 0 1 21.952 21.952 2 0.027665 3545 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.033 47.975 0 0 95.475 115.63 0 108.73 0 0 93 111 0 102 0 0 1 1 0 1 17846 1861 2295 1825 4358 5009 5009 1 ASGVEGADVVK Unmodified 1030.5295 0.52948901 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 6.6 3.26 1 2 1 1 46.951 46.951 2;3 5.6721E-17 14568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 169.93 92.257 1059.3 870.59 1093.5 857.2 927.11 1275.5 997 886 1092 846 961 1220 7 6 6 4 6 7 125160 1862 1055 1826 4359;4360;4361;4362;4363 5010;5011;5012;5013;5014;5015;5016;5017 5013 8 ASGVPEAGSR Unmodified 929.45666 0.45665842 1976 Q3UH99;F6VQZ6 Shisa6 Protein shisa-6 homolog yes no 0 0 0 0 4 0.816 1 1 1 31.05 31.05 2 2.082E-05 7233 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.598 54.345 39.564 41.691 19.684 0 34.019 14.52 37 42 19 0 33 14 1 2 1 0 2 1 51380 1863 1976 1827 4364;4365;4366 5018;5019;5020 5019 3 ASGVQVADEVCR Acetyl (Protein N-term) 1331.614 0.6139637 3301 Q9R0P5 Dstn Destrin yes yes 1 0 0 0 7 6 1 1 52.21 52.21 2 1.092E-05 16039 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.303 48.307 127.1 146.32 154.35 161.21 149.55 204.4 120 148 158 158 158 195 1 1 1 1 2 1 21849 1864 3301 1828 4367;4368 5021;5022 5021 2 ASGVTVNDEVIK Acetyl (Protein N-term) 1272.6561 0.65614609 1549 P45591;A0A1Y7VJ71 Cfl2 Cofilin-2 yes no 1 0 0 0 5.5 4.39 1 1 1 1 62.346 62.346 2 1.7378E-14 22050 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.247 69.635 276.47 108.25 149.77 229.89 203.63 151.96 259 111 148 222 204 148 4 2 2 4 2 3 73264 1865 1549 1829 4369;4370;4371;4372 5023;5024;5025;5026 5025 4 ASGVTVNDEVIK Acetyl (Protein N-term);Deamidation (N) 1273.6402 0.64016167 1549 P45591;A0A1Y7VJ71 Cfl2 Cofilin-2 yes no 1 1 0 0 2.5 0.5 1 1 65.212 65.212 2 1.2608E-05 23541 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.275 56.291 29.731 38.458 37.117 79.647 64.295 58.671 28 38 37 76 65 56 2 2 1 3 2 2 7523.4 1866 1549 1829 4373;4374 5027;5028;5029 5029 578 3 ASGYQSSQK Unmodified 954.44067 0.44067401 1605 P51859;E0CXA0 Hdgf Hepatoma-derived growth factor yes no 0 0 0 0 6.5 0.5 1 1 31.677 31.677 3 0.0017777 6747 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.643 52.314 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 1762.3 1867 1605 1830 4375;4376 5030;5031 5030 2 ASHFFTVTDPR Unmodified 1276.62 0.62003536 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 7.5 0.5 1 1 49.6 49.6 3 0.013588 14352 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.004 17.146 39.701 0 47.728 85.491 126.7 125.37 37 0 46 83 129 121 1 0 1 2 2 2 9860.1 1868 2832 1831 4377;4378 5032;5033 5032 2 ASHGYGGK Unmodified 775.3613 0.36130147 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 7 0.816 1 1 1 26.4 26.4 3 0.0021074 4113 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.253 58.015 236.71 182.31 276.63 294.49 202.42 215.95 223 186 279 288 211 208 3 2 3 3 2 2 30923 1869 2075 1832 4379;4380;4381 5034;5035;5036 5035 3 ASHLELNNGTK Acetyl (Protein N-term);Deamidation (N) 1225.5939 0.59388018 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 1 1 0 0 3.33 0.471 2 1 47.517 47.517 2 4.0288E-10 15146 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.507 30.747 0 78.096 68.581 30.604 76.095 107.4 0 74 65 28 74 102 0 2 2 1 2 3 22053 1870 1548 1833 4382;4383;4384 5037;5038;5039;5040 5040 577 4 ASHTAPQVLFSHR Unmodified 1449.7477 0.74769548 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 9.33 2.62 1 1 1 37.519 37.519 4 3.3893E-05 8964 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.167 76.112 266.27 381.65 281.92 195.79 380.86 465.63 251 380 285 196 388 447 2 3 2 1 3 3 40617 1871 2971 1834 4385;4386;4387 5041;5042;5043 5041 3 ASIGNIALSPSPVR Unmodified 1380.7725 0.77251325 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 62.026 62.026 2 7.091E-21 18877 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.02 100.13 48.807 44.739 54.642 67.788 0 39.442 46 46 56 65 0 37 1 1 1 1 0 1 8513.7 1872 2691 1835 4388;4389 5044;5045 5045 2 ASIHEAWTDGK Unmodified 1213.5728 0.57275081 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 5 0 1 47.517 47.517 3 0.00077501 14767 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.451 51.977 59.628 0 77.246 56.604 0 59.696 56 0 74 56 0 56 1 0 1 1 0 1 5894.9 1873 418;310 1836 4390 5046 5046 1 ASILDEYEDSLSR Acetyl (Protein N-term) 1538.71 0.71003215 2656 Q8R307 Vps18 Vacuolar protein sorting-associated protein 18 homolog yes yes 1 0 0 0 2.5 0.5 1 1 87.89 87.89 2 5.5997E-51 29193 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.69 93.925 1.0465 5.2494 4.328 3.279 3.9316 9.4818 1 5 4 3 4 9 1 1 1 1 1 2 4252.6 1874 2656 1837 4391;4392 5047;5048 5047 2 ASILNTWISLK Unmodified 1244.7129 0.71287311 3146 Q9DCL9 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 0 6.5 5.5 1 1 85.945 85.945 3 1.0328E-08 24020 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.42 72.137 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 14910 1875 3146 1838 4393;4394 5049;5050 5050 2 ASILWLIGEYCEHVPK Unmodified 1913.971 0.97095506 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 10 0 2 88.096 88.096 3;4 1.7942E-05 28367 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.529 51.454 0 20.09 7.5301 22.504 18.867 42.102 0 19 9 21 19 40 0 1 1 1 1 2 8149.4 1876 3249 1839 4395;4396 5051;5052 5051 2 ASIPFSVVGSNQLIEAK Unmodified 1758.9516 0.95159983 899 E9Q3V6;P42208 Sept2 Septin-2 yes no 0 0 0 0 10.7 1.7 1 1 1 78.305 78.305 3 2.3076E-12 26502 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.5 86.675 168.14 63.176 0 100.64 53.813 58.16 157 65 0 93 56 56 2 1 0 2 1 1 17227 1877 899 1840 4397;4398;4399 5053;5054;5055 5053 3 ASIPVVTYYER Unmodified 1296.6714 0.67140222 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 7 1 1 1 62.669 62.669 2;3 0.044633 21388 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.54 24.215 0 28.828 57.668 26.816 18.642 0 0 28 56 28 19 0 0 1 1 1 1 0 2777.4 1878 2792 1841 4400;4401 5056;5057 5056 2 ASLAALPPLHVAK Unmodified 1286.7711 0.77105669 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 9.8 0.748 2 2 1 62.701 62.701 3;4 1.3481E-05 17282 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.88 79.089 187.14 222.19 348.76 235.67 432.4 422.59 176 222 343 232 436 408 3 3 4 3 4 5 47713 1879 895 1842 4402;4403;4404;4405;4406 5058;5059;5060;5061;5062 5061 5 ASLACGPMVK Unmodified 1032.5096 0.50962197 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 8 0 1 53.837 53.837 2 0.0044504 15701 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.113 44.992 0 19.729 29.112 0 0 39.442 0 19 28 0 0 37 0 1 1 0 0 1 2120.2 1880 3204 1843 4407 5063 5063 1 ASLAETDK Unmodified 833.41306 0.41306227 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 8 3.56 1 1 1 42.113 42.113 2 0.0012905 12254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.93 76.678 260.55 519.25 348.14 247.93 376.77 632.05 245 510 348 241 384 603 2 3 2 2 2 3 57677 1881 1596 1844 4408;4409;4410 5064;5065;5066 5066 3 ASLAETDKITLEVAK Unmodified 1587.872 0.87195252 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 6 0 1 65.086 65.086 4 0.00053767 22373 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.472 31.293 0 78.736 0 79.367 80.542 76.586 0 74 0 74 83 74 0 1 0 1 1 1 5234.9 1882 1596 1845 4411 5067 5067 1 ASLDAADSGR Unmodified 961.44649 0.44648767 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 8.5 4.5 1 1 35.568 35.568 2 0.0019812 9527 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.895 46.447 128.02 46.283 85.135 94.827 92.922 0 120 46 83 93 93 0 2 1 1 1 1 0 8602.3 1883 62 1846 4412;4413 5068;5069 5068 2 ASLFSFK Unmodified 798.42759 0.42759012 111 A0A0J9YTW6;B1AWN6 Scn2a1 Sodium channel protein yes no 0 0 0 0 6 5 1 1 70.133 70.133 2 0.017333 23914 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.064 9.2097 109.45 0 0 0 82.835 115.96 102 0 0 0 83 111 1 0 0 0 1 1 39985 1884 111 1847 4414;4415 5070;5071 5070 2 ASLISAVSDK Unmodified 989.53933 0.53932542 2117 Q61187;D3Z0S9;A0A1B0GS09 Tsg101 Tumor susceptibility gene 101 protein yes no 0 0 0 0 9 0 1 61.713 61.713 2 4.6266E-05 18717 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.78 65.741 39.366 66.506 0 71.045 0 49.036 37 65 0 65 0 46 1 1 0 1 0 1 2837.9 1885 2117 1848 4416 5072 5072 1 ASLLAGK Unmodified 658.40138 0.40137537 3282;1240 O55137;A0A1Y7VMZ4;Q91YQ6;Q6Q2Z6;Q9QYR7;A0A1Y7VML8;Q9QYR9 Acot1;Acot5;Acot3;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 5;Acyl-coenzyme A thioesterase 3;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 11.3 1.25 1 1 1 52.645 52.645 2 0.02534 12800 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.74 43.278 137.81 183.19 260.66 128.57 133.89 193.39 130 185 257 130 140 185 1 2 2 1 1 1 23358 1886 1240;3282 1849 4417;4418;4419 5073;5074;5075 5073 3 ASLLCCGPK Unmodified 1004.4783 0.47832184 1124 H3BLR9;Q8K3C0 Rnasek Ribonuclease kappa yes no 0 0 0 0 9 0 1 53.878 53.878 2 0.00035659 14966 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.56 81.885 59.852 0 39.732 0 67.99 0 56 0 37 0 65 0 1 0 1 0 1 0 3416.7 1887 1124 1850 4420 5076 5076 1 ASLLQSER Acetyl (Protein N-term) 944.49271 0.49270958 2520 Q8CBY8;Q3TRR2 Dctn4 Dynactin subunit 4 yes no 1 0 0 0 2.5 0.5 1 1 55.597 55.597 2 0.038745 18662 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.854 31.299 9.535 0 28.93 29.589 27.26 19.476 9 0 28 28 28 19 1 0 2 1 1 1 7779 1888 2520 1851 4421;4422 5077;5078 5077 2 ASLLQSK Unmodified 745.4334 0.43340378 2263 Q6ZQ18;A0A1W2P7T9 Efr3b Protein EFR3 homolog B yes no 0 0 0 0 9 0 1 50.159 50.159 2 0.027113 13262 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.064 37.901 0 88.312 0 0 0 168.43 0 83 0 0 0 158 0 1 0 0 0 1 15249 1889 2263 1852 4423 5079 5079 1 ASLNGADIYSGCCTLK Deamidation (N) 1729.7651 0.76512097 1110 G5E924;Q8R081;G3UY38;G3UY56 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 1 0 0 5 0 1 64.629 64.629 3 0.031692 22808 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.968 29.697 0 0 58.019 57.75 0 69.29 0 0 56 56 0 65 0 0 1 1 0 1 5255.3 1890 1110 1853 4424 5080 5080 295 1 ASLPASEK Unmodified 801.42323 0.42323303 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 6.5 0.5 1 1 42.101 42.101 2 0.0098587 11617 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.136 34.332 39.701 77.064 99.996 128.95 138.16 38.106 37 74 102 125 139 37 1 1 1 1 2 1 11007 1891 1999 1854 4425;4426 5081;5082 5081 2 ASLPGVK Unmodified 670.40138 0.40137537 1247 O70251 Eef1b Elongation factor 1-beta yes yes 0 0 0 0 10 2.16 1 1 1 49.313 49.313 2;3 0.033339 12748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.614 33.575 283.69 39.803 327.27 0 0 368.84 266 38 306 0 0 346 1 1 2 0 0 2 32023 1892 1247 1855 4427;4428;4429 5083;5084;5085 5084 3 ASLQELDLSSNK Unmodified 1303.662 0.66195975 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 6 0 1 62.06 62.06 2 0.00078255 21073 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.531 43.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1893 2741 1856 4430 5086 5086 1 ASLQNLLSASQAR Unmodified 1357.7314 0.73137672 1521 P35505;D3Z2R9 Fah Fumarylacetoacetase yes no 0 0 0 0 9.5 0.5 1 1 65.306 65.306 2 3.5754E-19 18296 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 151.7 111.85 88.88 35.401 0 29.902 94.276 47.411 83 37 0 28 93 46 2 1 0 1 2 1 13939 1894 1521 1857 4431;4432 5087;5088 5088 2 ASLQVQLDAVNK Unmodified 1284.7038 0.70376498 3195 Q9ESN6;Q3UHH4;E9QKC6;D3YY69;D3YZJ0 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 7.5 0.5 1 1 62.575 62.575 3 0.014606 20501 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.511 17.182 30.044 0 0 0 0 59.696 28 0 0 0 0 56 1 0 0 0 0 1 3250.6 1895 3195 1858 4433;4434 5089;5090 5089 2 ASLSLADHR Unmodified 968.50394 0.50394297 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 6 0 1 38.253 38.253 3 0.0083279 9809 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.55 30.246 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 5508 1896 513 1859 4435 5091 5091 1 ASLSLAPVNIFK Acetyl (Protein N-term) 1300.7391 0.73908786 1823 P80314;A0A1W2P7B7;A0A1W2P6Q3 Cct2 T-complex protein 1 subunit beta yes no 1 0 0 0 10.2 1.72 1 1 1 1 1 94.776 94.776 2;3 6.7958E-15 34341 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.684 48.082 48.971 45.196 41.808 64.393 85.029 39.46 46 46 42 61 84 38 2 2 2 3 3 2 36931 1897 1823 1860 4436;4437;4438;4439;4440 5092;5093;5094;5095;5096;5097 5093 6 ASLSPMDEPVPDSESPVEK Unmodified 2012.9249 0.92485231 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4 0 1 63.969 63.969 3 0.038006 22741 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 31.111 18.213 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 3420 1898 1382 1861 4441 5098 5098 1 ASLTHEQQQSAR Unmodified 1354.6589 0.65894006 909 E9Q4M4;Q91VN4 Chchd6 MICOS complex subunit Mic25 yes no 0 0 0 0 5 0.816 1 1 1 25.296 25.296 3 7.0075E-21 4393 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 154.67 95.973 12.776 0 55.81 33.042 60.67 16.666 12 0 53 32 60 16 1 0 3 2 3 1 9999.7 1899 909 1862 4442;4443;4444 5099;5100;5101 5100 3 ASLTLFCPEEGDWK Unmodified 1651.7552 0.75520821 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.5 0.5 1 1 78.995 78.995 3 3.3246E-05 27532 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.401 44.614 0 48.944 0 68.595 130.25 163.65 0 46 0 65 130 157 0 1 0 1 1 2 23496 1900 1382 1863 4445;4446 5102;5103 5103 2 ASLTLTLLR Unmodified 986.61243 0.61243078 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 11.5 1.5 1 1 70.321 70.321 2 0.0057741 20660 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.426 50.205 49.358 0 0 0 56.251 67.685 46 0 0 0 56 65 1 0 0 0 1 1 8936.2 1901 2077 1864 4447;4448 5104;5105 5104 2 ASLYNAVTTEDVEK Unmodified 1538.7464 0.74641766 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 5 0 1 62.653 62.653 2 0.0038946 21997 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.091 24.735 0 0 30.296 0 18.538 38.913 0 0 28 0 19 37 0 0 1 0 1 1 1762.9 1902 2840 1866 4449 5106 5106 1 ASLYPCPETPQER Unmodified 1546.7086 0.70859237 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 8 3.56 1 1 1 50.068 50.068 2;3 1.8257E-18 16132 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.28 126.5 88.659 76.135 36.019 108.3 55.235 156.19 83 74 37 102 56 148 2 2 1 3 1 3 29497 1903 1151 1867 4450;4451;4452 5107;5108;5109 5109 3 ASNGDAWVEAHGK Deamidation (N) 1341.5949 0.59494282 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 1 0 0 3 0 1 47.803 47.803 3 0.0026371 15751 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.128 40.408 39.469 0 39.045 17.727 37.888 0 37 0 37 19 37 0 1 0 1 1 1 0 5125.4 1904 1533 1868 4453 5110 5110 571 1 ASNNTASIAQAR Acetyl (Protein N-term) 1244.6109 0.61092723 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 1 0 0 0 2 0.816 1 1 1 37.18 37.18 2 8.9438E-27 10535 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.83 115.1 40.369 0 77.794 46.483 63.083 136.78 38 0 74 47 65 130 2 0 3 2 2 3 108730 1905 1777 1869 4454;4455;4456 5111;5112;5113 5112 3 ASNNTASIAQAR Acetyl (Protein N-term);Deamidation (N) 1245.5949 0.59494282 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 1 1 0 0 13 0 1 39.055 39.055 2 2.6616E-11 10983 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.855 78.407 29.807 46.934 0 70.06 52.37 86.984 28 46 0 65 56 83 1 1 0 1 1 1 9316.6 1906 1777 1869 4457 5114 5114 706 1 ASNPFLPSGAPPTGPSVTNPFQPAPPATLTLNQLR Unmodified 3554.8522 0.85216714 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 10 0.816 1 1 1 88.888 88.888 4 9.1283E-05 28674 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.523 30.493 9.3998 67.908 36.994 0 0 20.254 9 65 38 0 0 19 1 2 2 0 0 1 34019 1907 2324 1870 4458;4459;4460 5115;5116;5117;5118;5119 5117 5 ASNTADTLFQEVLGR Unmodified 1620.8107 0.81074925 3063 Q9D4H1 Exoc2 Exocyst complex component 2 yes yes 0 0 0 0 6 0 1 81.243 81.243 3 0.0057235 29983 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.657 19.981 0 29.792 0 30.604 0 29.848 0 28 0 28 0 28 0 1 0 1 0 1 4318.4 1908 3063 1871 4461 5120 5120 1 ASNVTNK Acetyl (Protein N-term) 774.38718 0.38718187 3389 Q9Z204;A0A2I3BRM6;A0A2I3BQH3;A0A2I3BQW7 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 1 0 0 0 3.5 0.5 1 1 37.586 37.586 2 0.035656 10394 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.415 57.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1909 3389 1872 4462;4463 5121;5122 5122 2 ASPALVAK Unmodified 755.45414 0.45413923 1807 P70297;Q3UGN9;A2ARJ0 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 8.5 0.5 1 1 47.541 47.541 2 0.010591 11912 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.997 19.528 0 0 66.905 76.894 0 127.92 0 0 65 74 0 120 0 0 1 1 0 1 10559 1910 1807 1873 4464;4465 5123;5124 5124 2 ASPAPTPTPAGAASPLAAVAAPATDAPQAK Unmodified 2667.3868 0.38679453 74;1367 A0A0A6YY91;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 6 0 1 67.294 67.294 4 1.388E-05 23422 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.666 35.854 49.055 16.287 37.145 37.354 46.4 0 46 19 37 37 46 0 1 1 1 1 1 0 8483.9 1911 74;1367 1874 4466 5125 5125 1 ASPDESQTLR Unmodified 1102.5255 0.52546627 784 D3Z709;Q9D415 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 2.5 0.5 1 1 34.502 34.502 2 3.7017E-05 9469 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.76 62.047 49.358 0 29.449 58.238 64.567 47.194 46 0 28 56 65 46 1 0 1 2 1 1 8841.8 1912 784 1875 4467;4468 5126;5127 5127 2 ASPDTPPER Unmodified 968.45632 0.45632407 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 2 0 1 29.292 29.292 2 0.036465 6766 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.815 28.648 0 0 19.476 0 19.197 19.706 0 0 18 0 19 19 0 0 1 0 1 1 1347.2 1913 828 1876 4469 5128 5128 1 ASPEPSALPAQR Unmodified 1222.6306 0.63060004 1215 O35954 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 0 0 0 0 4 0 1 40.911 40.911 2 0.00016198 11954 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.16 56.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1914 1215 1877 4470 5129 5129 1 ASPFLLQYIQEEIPDYR Unmodified 2081.047 0.046956778 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 7 0 1 93.195 93.195 3 0.0018943 34452 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.459 0.23859 24.504 18.331 13.925 0 9.0934 9.3345 23 19 14 0 9 9 1 1 1 0 1 1 1671.7 1915 2671 1878 4471 5130 5130 1 ASPFPVYK Unmodified 907.48035 0.48035398 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 10.2 2.11 2 1 1 2 59.412 59.412 2;3 0.0090296 18421 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.252 40.358 908.71 294.31 852.43 583.47 917.38 800.62 853 305 820 572 923 766 5 2 4 4 5 4 155030 1916 1362 1879 4472;4473;4474;4475;4476;4477 5131;5132;5133;5134;5135;5136 5132 6 ASPKPPTLIIK Unmodified 1163.7278 0.72779489 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 1 10.5 0.5 1 1 56.09 56.09 3 0.0017708 14346 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.24 41.708 117.62 244.53 236.96 191.66 304.64 193.23 111 241 241 185 306 185 1 2 2 1 2 1 22241 1917 582 1880 4478;4479 5137;5138 5137 2 ASPLPHSPPDEL Unmodified 1258.6194 0.61936665 3104 Q9DAU1 Cnpy3 Protein canopy homolog 3 yes yes 0 0 0 0 4 0 1 55.196 55.196 2 0.011811 18781 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.567 41.848 0 38.595 46.238 27.34 27.034 29.077 0 37 46 28 28 28 0 1 1 1 1 1 2893.6 1918 3104 1881 4480 5139 5139 1 ASPPLEGSR Unmodified 912.46649 0.46649483 837 E9PWK1;Q9D379;D3Z4M3 Ephx1 Epoxide hydrolase 1 yes no 0 0 0 0 5 0 1 35.466 35.466 2 0.020878 8971 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.265 29.457 49.184 0 29.2 19.027 0 0 46 0 28 19 0 0 1 0 1 1 0 0 1103.5 1919 837 1882 4481 5140 5140 1 ASPQATK Unmodified 701.3708 0.37080353 1275 O88737 Bsn Protein bassoon yes no 0 0 0 0 6 0 1 30.612 30.612 2 0.043263 6270 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.334 49.822 48.712 64.982 53.462 67.012 45.038 0 46 65 56 65 46 0 1 1 1 1 1 0 3047 1920 1275 1883 4482 5141 5141 1 ASPSPSPSEAR Unmodified 1084.5149 0.51490158 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 28.924 28.924 2 3.0407E-13 6022 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.53 94.411 99.217 76.419 178.7 152.76 153.96 165.3 93 75 175 148 158 158 3 3 4 3 4 3 73309 1921 817 1884 4483;4484;4485;4486;4487 5142;5143;5144;5145;5146 5146 5 ASPTSTEEEQVMLR Unmodified 1576.7403 0.74028642 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0;F6R4N2;A0A0R4J0Q2;E9QAD0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 2.5 0.5 1 1 50.925 50.925 3 0.00040539 17084 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.115 41.398 0 0 0 0 18.867 48.31 0 0 0 0 19 47 0 0 0 0 1 2 4324.7 1922 677 1885 4488;4489 5147;5148 5148 2 ASQAPSSFQLLYDLK Unmodified 1666.8566 0.85663681 2804 Q922D8;A0A1W2P733;A0A1W2P7L5 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 7 0 1 81.499 81.499 3 0.018428 29367 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.91 20.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1923 2804 1886 4490 5149 5149 1 ASQASQEY Unmodified 882.37193 0.37192574 1468 P27661 H2afx Histone H2AX yes yes 0 0 0 0 2.5 1.12 1 1 1 1 35.826 35.826 2 0.0047341 10039 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.54 98.981 78.899 43.896 47.376 56.856 81.247 86.16 74 47 46 56 83 83 2 2 1 2 2 2 74879 1924 1468 1887 4491;4492;4493;4494 5150;5151;5152;5153 5152 4 ASQGPVYK Unmodified 848.43922 0.43921744 2959 Q9CR86 Carhsp1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 0 7 0 1 39.792 39.792 2 0.058744 9788 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.91 18.931 0 76.711 121.11 92.566 99.132 96.309 0 74 120 93 102 93 0 1 1 1 1 1 3890 1925 2959 1888 4495 5154 5154 1 ASQLVSEK Unmodified 860.46035 0.46034682 2155 Q62419 Sh3gl1 Endophilin-A2 yes yes 0 0 0 0 7 0 1 45.207 45.207 2 0.012525 12369 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.029 25.61 39.094 56.037 54.487 57.143 43.484 58.455 37 56 56 56 46 56 1 1 1 1 1 1 3882.3 1926 2155 1889 4496 5155 5155 1 ASQNPER Unmodified 800.37768 0.37767982 3231 Q9JKF7 Mrpl39 39S ribosomal protein L39, mitochondrial yes yes 0 0 0 0 3 0 1 18.368 18.368 2 0.026906 2646 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.819 42.803 5.336 0 4.8738 11.434 15.897 9.1404 5 0 5 11 16 9 1 0 1 1 1 1 789.5 1927 3231 1890 4497 5156 5156 1 ASQPVAESTPAGLGAAVYEEILQTSQSIAR Unmodified 3043.5462 0.5462083 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8.25 2.86 2 1 1 101.02 101.02 3;4 1.7287E-18 37320 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.118 58.436 0 7.448 0 13.919 15.402 0 0 7 0 13 15 0 0 2 0 3 1 0 6339.8 1928 1275 1891 4498;4499;4500;4501 5157;5158;5159;5160 5157 4 ASQSQGIQQLLQAEK Acetyl (Protein N-term) 1669.8635 0.8635131 2954 Q9CR51 Atp6v1g1 V-type proton ATPase subunit G 1 yes yes 1 0 0 0 5 0 1 76.432 76.432 2 4.3767E-05 28424 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.451 43.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1929 2954 1892 4502 5161 5161 1 ASQSTPR Unmodified 745.37187 0.37186616 461 A2AG50 Map7d2 MAP7 domain-containing protein 2 yes yes 0 0 0 0 5 0 1 18.782 18.782 2 0.023644 2616 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.77 58.052 0 0 5.1803 5.1563 0 5.33 0 0 5 5 0 5 0 0 1 1 0 1 509.74 1930 461 1893 4503 5162 5162 1 ASQTQGIQQLLQAEK Acetyl (Protein N-term) 1683.8792 0.87916317 3324 Q9WTT4 Atp6v1g2 V-type proton ATPase subunit G 2 yes yes 1 0 0 0 5.5 0.5 1 1 78.408 78.408 3 1.0078E-11 28634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.156 38.624 78.519 111.18 161 64.851 58.576 118.33 74 112 158 65 56 111 1 2 2 1 1 1 81088 1931 3324 1894 4504;4505 5163;5164 5164 2 ASREEIHEYR Unmodified 1288.616 0.61601261 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 3 0 1 26.991 26.991 4 0.0027592 6001 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.93 46.057 59.604 54.984 34.773 37.299 56.863 0 56 56 37 37 56 0 1 1 1 1 1 0 3543.3 1932 1557 1895 4506 5165 5165 1 ASSALLR Unmodified 716.41809 0.41808807 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 7 0 1 40.566 40.566 2 0.01312 10135 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.512 29.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1933 1018;2532 1896 4507 5166 5166 1 ASSATDGQLASPGENGEVRPGQAK Deamidation (N) 2327.0989 0.098945361 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 1 0 1 4 0 1 44.353 44.353 4 6.8222E-15 13623 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.267 70.31 0 0 0 0 27.961 38.644 0 0 0 0 28 37 0 0 0 0 1 1 2213 1934 1388 1897 4508 5167 5167 455 1 ASSDIQVK Acetyl (Protein N-term) 888.45526 0.45526144 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 1 0 0 0 5.4 3.93 1 1 1 1 1 49.525 49.525 2 6.1118E-17 16095 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.39 84.237 919.09 525.98 535.37 896.86 99.571 164.52 862 561 536 849 102 157 5 5 4 4 2 3 252160 1935 1619 1898 4509;4510;4511;4512;4513 5168;5169;5170;5171;5172 5170 5 ASSEVER Unmodified 776.36645 0.36644643 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 0 0 0 1 0 1 23.526 23.526 2 0.027192 3927 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.523 32.847 93.998 0 71.528 59.617 90.381 121.08 88 0 69 60 93 116 1 0 1 1 1 1 24721 1936 1910 1899 4514 5173 5173 1 ASSHTVLMR Acetyl (Protein N-term) 1042.523 0.52296385 255;3362 A0A1B0GRV0;D3Z5X0;Q9Z0S1 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 1 0 0 0 3 0 1 36.099 36.099 2 0.0050721 10227 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.546 52.841 9.657 0 0 30.275 17.475 29.349 9 0 0 28 19 28 1 0 0 1 1 1 1829.8 1937 255;3362 1900 4515 5174 5174 1 ASSIEEISDLILDQQELLR Unmodified 2171.1321 0.13214297 2570 Q8JZR6 Slc4a8 Electroneutral sodium bicarbonate exchanger 1 yes yes 0 0 0 0 5 0 1 99.984 99.984 3 2.8276E-05 35962 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.997 42.245 2.1332 0 2.1532 0 0 0 2 0 2 0 0 0 1 0 1 0 0 0 989.25 1938 2570 1901 4516 5175 5175 1 ASSIVVSGTPIR Unmodified 1185.6717 0.67173657 1521 P35505;D3Z2R9 Fah Fumarylacetoacetase yes no 0 0 0 0 7.5 0.5 1 1 52.721 52.721 2 2.3511E-09 15820 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.946 74.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1939 1521 1902 4517;4518 5176;5177 5176 2 ASSLISLLK Unmodified 930.57498 0.57498264 1022 F7CBP1;G3XA17;Q62448 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 6 5 1 1 78.438 78.438 2;3 0.00039317 23772 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.948 33.383 0 20.216 0 0 37 50.102 0 19 0 0 37 47 0 1 0 0 1 1 4428 1940 1022 1903 4519;4520 5178;5179 5179 2 ASSLNENVDHSALLK Unmodified 1596.8107 0.81074925 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6 0 1 52.36 52.36 3 2.7631E-05 16429 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.833 51.602 68.917 63.081 85.674 0 0 0 65 65 83 0 0 0 1 1 1 0 0 0 6560 1941 2255 1904 4521 5180 5180 1 ASSLNFLNK Unmodified 992.5291 0.52909508 717 Q91YS4;D3YXZ3;O88448 Klc2 Kinesin light chain 2 yes no 0 0 0 0 10 0 1 64.42 64.42 2 0.0069595 17913 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.643 14.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1942 717 1905 4522 5181 5181 1 ASSQSQPLER Unmodified 1101.5415 0.54145068 2476 Q8BX94 Osbpl2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 0 4 0 1 29.949 29.949 2 0.0036254 6861 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.755 49.383 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 1981.9 1943 2476 1906 4523 5182 5182 1 ASSSAGNLGVLIPVIAVLTR Unmodified 1937.131 0.13096118 240 A0A140T8I9;E9Q3L2;A0A338P7D3 Pi4ka yes no 0 0 0 0 6.25 5.26 2 1 1 101.82 101.82 3 2.7662E-13 28630 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.45 91.893 10.664 13.113 24.886 5.3746 21.325 26.4 10 13 23 5 21 25 3 3 2 1 3 4 14798 1944 240 1907 4524;4525;4526;4527 5183;5184;5185;5186;5187;5188;5189 5188 7 ASSSEDASTLTSEER Unmodified 1568.6802 0.68018859 404 A0A338P686;A0A338P6Y5;A0A338P6P0;Q9CQ33 Lztr1 Leucine-zipper-like transcriptional regulator 1 yes no 0 0 0 0 1 0 1 39.007 39.007 3 0.00023381 10770 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.326 53.242 0 0 0 20.767 0 9.594 0 0 0 19 0 9 0 0 0 1 0 1 2170.5 1945 404 1908 4528 5190 5190 1 ASSSILINEAEPTTNIQIR Unmodified 2056.08 0.08004782 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6 0 1 67.007 67.007 3 8.8526E-16 23330 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.492 63.479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1946 3000 1909 4529 5191 5191 1 ASSSTYHR Unmodified 907.41479 0.41479361 2557 Q8CIP4 Mark4 MAP/microtubule affinity-regulating kinase 4 yes yes 0 0 0 0 5 0 1 18.244 18.244 3 0.0017487 2551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.6 57.793 0 7.448 0 5.3713 4.9833 0 0 7 0 5 5 0 0 1 0 1 1 0 469.49 1947 2557 1910 4530 5192 5192 1 ASTAAPVASPAAPSPGSSGGGGFFSSLSNAVK Deamidation (N) 2834.3723 0.37226668 1282 O88935 Syn1 Synapsin-1 yes yes 0 1 0 0 6.5 0.5 1 1 77.027 77.027 4 2.2305E-20 27177 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.149 57.252 39.362 95.86 26.212 117.52 118.88 66.683 37 93 28 111 121 65 1 2 1 2 2 1 30412 1948 1282 1911 4531;4532 5193;5194 5194 349 2 ASTAAPVASPAAPSPGSSGGGGFFSSLSNAVK Unmodified 2833.3883 0.38825109 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8.86 1.96 2 2 1 1 1 75.646 75.646 3;4;5 1.07E-47 25864 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.57 94.158 592.91 336.39 467 186.36 724.52 675 556 343 453 185 723 650 7 5 7 3 8 6 318250 1949 1282 1911 4533;4534;4535;4536;4537;4538;4539 5195;5196;5197;5198;5199;5200;5201;5202;5203;5204 5198 10 ASTEGANNMPK Acetyl (Protein N-term);Oxidation (M);Deamidation (N) 1177.4921 0.49211723 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 1 1 1 0 1 0 1 35.147 35.147 2 0.0006005 9095 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.823 35.918 20.123 18.379 28.746 7.7694 18.84 19.716 19 19 28 9 19 19 1 1 1 1 1 1 3667.6 1950 502;1544 1912 4540 5205 5205 124;125 24 1 ASTEGANNMPK Acetyl (Protein N-term);Deamidation (N) 1161.4972 0.49720261 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 1 1 0 0 3.5 3.64 1 4 2 1 45.355 45.355 2 7.815E-21 13751 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.853 81.143 569.99 169.64 463.33 234.58 444.93 431.36 534 178 444 228 444 413 8 5 8 6 7 8 200060 1951 502;1544 1912 4541;4542;4543;4544;4545;4546;4547;4548 5206;5207;5208;5209;5210;5211;5212;5213;5214;5215 5207 124;125 10 ASTEGANNMPK Acetyl (Protein N-term);Oxidation (M) 1176.5081 0.50810164 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 1 0 1 0 2 0.816 1 1 1 33.508 33.508 2 0.00389 8785 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.775 43.251 0 0 39.158 19.658 19.874 20.254 0 0 37 19 19 19 0 0 2 1 1 1 7258.9 1952 502;1544 1912 4549;4550;4551 5216;5217;5218 5217 24 3 ASTEGANNMPK Acetyl (Protein N-term) 1160.5132 0.51318702 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 1 0 0 0 3.5 0.5 1 1 43.579 43.579 2 1.2721E-42 13585 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.136 82.596 108.19 68.902 151.88 129.78 115.25 155.82 102 74 148 129 121 148 1 1 1 2 2 1 55653 1953 502;1544 1912 4552;4553 5219;5220 5219 2 ASTIFLSK Unmodified 865.49092 0.49091866 2388 Q8BGU5;A0A087WPI4;E9Q226;D3YUJ3 Ccny;Ccnyl1 Cyclin-Y yes no 0 0 0 0 10 1 1 1 61.755 61.755 2 0.016577 16247 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.548 39.439 201.64 190.32 309.55 204.33 190.11 106.36 190 195 306 200 190 102 2 2 3 2 2 1 18263 1954 2388 1913 4554;4555 5221;5222;5223 5223 3 ASTLHLQTGNLLNWGR Unmodified 1779.938 0.93801545 1177 O09172;A0A0G2JDI4 Gclm Glutamate--cysteine ligase regulatory subunit yes no 0 0 0 0 10 0 1 67.518 67.518 3 4.5206E-06 19333 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.326 53.004 69.221 103.86 0 88.857 98.973 105.91 65 102 0 83 102 102 1 1 0 1 1 1 6640.3 1955 1177 1914 4556 5224 5224 1 ASTLLLQNTLVALK Unmodified 1483.8974 0.89737941 2348 Q80ZJ7 Snx32 Sorting nexin-32 yes yes 0 0 0 0 12 0 1 85.047 85.047 2 0.00028642 23808 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.745 61.233 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 795.61 1956 2348 1915 4557 5225 5225 1 ASTQFSFVYLAHPR Unmodified 1622.8205 0.82052608 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10 0 1 63.332 63.332 3 8.6198E-12 17448 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.36 96.394 69.032 63.399 66.178 0 0 0 65 65 65 0 0 0 1 1 1 0 0 0 8800.9 1957 570 1916 4558 5226 5226 1 ASTSVQNR Unmodified 861.43044 0.43044367 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 8 3.56 1 1 1 22.197 22.197 2 0.0053541 3371 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.71 56.985 33.051 15.314 22.714 42.573 47.114 12.792 31 15 22 41 46 12 2 1 1 2 1 1 5901.7 1958 121 1917 4559;4560;4561 5227;5228;5229 5227 3 ASTVAYLTSQLHAAK Unmodified 1559.8308 0.83075641 2700 Q8VDN4 Ccdc92 Coiled-coil domain-containing protein 92 yes yes 0 0 0 0 11 0 1 64.732 64.732 3 0.0011947 17670 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.966 29.848 48.703 0 110.12 0 0 0 46 0 102 0 0 0 1 0 1 0 0 0 4498.2 1959 2700 1918 4562 5230 5230 1 ASVASDPESPPGGNEPAAASGQR Unmodified 2150.9829 0.98285297 726 D3Z4K1;D3Z478;D3YYS7;Q9D0L8 Rnmt mRNA cap guanine-N7 methyltransferase yes no 0 0 0 0 2 0 1 41.39 41.39 3 3.0073E-14 12491 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.733 60.24 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1960 726 1920 4563 5231 5231 1 ASVAVHSPQK Unmodified 1022.5509 0.55089316 1279 O88845 Akap10 A-kinase anchor protein 10, mitochondrial yes yes 0 0 0 0 7 0 1 35.564 35.564 3 0.01451 7818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.092 20.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1961 1279 1921 4564 5232 5232 1 ASVDELFAEIVR Unmodified 1347.7034 0.70343063 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 0 8.67 3.09 1 1 1 88.011 88.011 2;3 0.00063421 32558 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.045 51.285 88.519 27.32 67.637 43.896 55.538 72.497 83 28 65 42 56 69 2 1 2 2 2 2 14247 1962 1695 1922 4565;4566;4567 5233;5234;5235 5234 3 ASVEDADTQNK Unmodified 1176.5259 0.5258602 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 38.276 38.276 2;3 7.878E-09 11198 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.39 100.27 97.792 67.383 261.66 96.568 56.948 185.99 92 65 250 93 56 176 2 1 3 1 1 2 46479 1963 2844 1923 4568;4569;4570;4571 5236;5237;5238;5239 5237 4 ASVGMYLISK Unmodified 1067.5685 0.56851706 2104 Q61024 Asns Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 0 10.5 0.5 1 1 68.903 68.903 2;3 0.0086523 20060 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.056 27.752 19.974 37.391 37.69 0 38.702 0 19 37 37 0 37 0 1 1 1 0 1 0 5250.4 1964 2104 1924 4572;4573 5240;5241 5240 2 ASVGTLAFDEYGRPFLIIK Acetyl (Protein N-term) 2138.1412 0.14119151 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 1 0 0 1 10 3 1 1 93.747 93.747 3 1.0533E-07 37421 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.663 22.105 74.643 73.432 16.209 11.896 89.319 63.543 70 74 16 12 88 62 2 2 1 1 2 2 26534 1965 1825 1925 4574;4575 5242;5243 5243 2 ASVLEELQK Acetyl (Protein N-term) 1057.5655 0.56554017 2990 Q9CXW3;A0A0A6YY29 Cacybp Calcyclin-binding protein yes no 1 0 0 0 8.5 4.5 1 1 81.084 81.084 2 0.00021355 30632 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.252 30.152 98.985 70.805 75.138 45.111 84.746 0 93 74 74 46 83 0 2 2 1 1 2 0 14228 1966 2990 1926 4576;4577 5244;5245 5244 2 ASVLEELQKDLEEVK Acetyl (Protein N-term) 1770.9251 0.92511031 2990 Q9CXW3;A0A0A6YY29 Cacybp Calcyclin-binding protein yes no 1 0 0 1 5 0.816 1 1 1 100.2 100.2 3 2.3799E-07 35981 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.185 42.522 4.2254 15.238 7.0329 5.0458 0 13.858 4 15 7 5 0 13 1 3 1 1 0 2 5383.9 1967 2990 1927 4578;4579;4580 5246;5247;5248 5247 3 ASVMLFMK Unmodified 925.47653 0.47653093 259 A0A1B0GS58;Q9CQM9;A0A1B0GT04 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 6.5 5.5 1 1 74.254 74.254 2 0.0093549 25513 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.45 32.029 49.112 16.447 27.354 77.717 81.589 48.298 46 19 28 74 83 46 1 1 1 2 2 1 6373.6 1968 259 1928 4581;4582 5249;5250 5249 2 ASVNLLMANLESLPVSK Unmodified 1784.9706 0.97062071 912 S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6 Cadps2 Calcium-dependent secretion activator 2 yes no 0 0 0 0 10 0 1 89.856 89.856 3 0.00016945 29128 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.003 38.621 0 0 0 19.891 46.552 18.926 0 0 0 19 46 19 0 0 0 1 1 1 1067.1 1969 912 1929 4583 5251 5251 1 ASVPEGFLSELTQQLAQATGK Unmodified 2174.1219 0.12191263 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 0 0 0 10.2 1.69 2 3 2 2 1 2 101.55 101.55 3;4 3.8432E-30 33576 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 138.28 114.24 335.53 391.84 393.61 315.88 333.57 333.42 315 388 376 305 336 318 8 8 8 11 8 10 284130 1970 1510 1930 4584;4585;4586;4587;4588;4589;4590;4591;4592;4593;4594;4595 5252;5253;5254;5255;5256;5257;5258;5259;5260;5261;5262;5263;5264;5265;5266;5267;5268;5269;5270;5271 5265 20 ASVPFSGQK Unmodified 919.47633 0.47633123 1900 Q11136 Pepd Xaa-Pro dipeptidase yes yes 0 0 0 0 9 0 1 49.625 49.625 2 0.011985 12942 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.507 38.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1971 1900 1931 4596 5272 5272 1 ASVPLVQGH Unmodified 906.49232 0.49231565 251 A0A1B0GRP7;Q9Z2Y8 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 6 0 1 48.173 48.173 2 0.0036178 14468 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.752 65.957 78.108 101.06 131.88 52.177 62.249 97.362 74 102 130 56 65 93 1 1 1 1 1 1 4327.4 1972 251 1932 4597 5273 5273 1 ASVSTHGNQEK Acetyl (Protein N-term) 1198.5578 0.55782903 113 A0A0J9YUI7;A0A0J9YU56;Q9D8W7 Ociad2 OCIA domain-containing protein 2 yes no 1 0 0 0 2.5 0.5 1 1 28.887 28.887 2 2.7746E-16 6852 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.192 47.382 54.421 0 50.704 20.621 15.846 59.244 51 0 47 19 18 56 2 0 1 1 2 2 5366.8 1973 113 1933 4598;4599 5274;5275 5275 2 ASVTDGK Acetyl (Protein N-term) 718.34973 0.34973373 3010 Q9CZT8;A2A7Z6 Rab3b Ras-related protein Rab-3B yes no 1 0 0 0 2.5 0.5 1 1 40.756 40.756 2 0.0040339 12354 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.62 82.632 167.91 154.41 142.61 196.35 33.954 98.169 158 158 148 188 37 93 1 1 1 2 1 1 32099 1974 3010 1934 4600;4601 5276;5277 5277 2 ASVTVGGEQISAIGR Unmodified 1443.7682 0.76815616 3159 Q9DD18 Dtd1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 0 0 6 0 1 56.555 56.555 2 0.00011025 18479 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.2 56.339 40.638 27.052 0 0 28.291 29.041 38 28 0 0 28 28 1 1 0 0 1 1 4164.2 1975 3159 1935 4602 5278 5278 1 ASVVSTDGAPK Unmodified 1030.5295 0.52948901 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 13 0 1 43.455 43.455 3 0.052578 13100 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 37.426 7.6161 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 6180.5 1976 2033 1936 4603 5279 5279 1 ASVVTLPVYLNFTR Unmodified 1578.877 0.87697832 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11.5 0.5 1 1 83.271 83.271 2;3 3.6629E-31 26045 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 167.44 141.5 12.832 41.058 38.093 15.079 41.147 0 12 40 37 14 40 0 1 2 1 1 2 0 21575 1977 3204 1937 4604;4605 5280;5281 5280 2 ASWAEPSEPAALR Acetyl (Protein N-term) 1425.6888 0.6888432 1196 O35465;D3Z597 Fkbp8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes no 1 0 0 0 2 0 1 66.757 66.757 2 6.5007E-11 24056 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.349 47.921 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 4360.1 1978 1196 1938 4606 5282 5282 1 ASWTNASK Unmodified 863.41373 0.41373097 1813 Q4FE56;P70398;F8VPU6;E9PWA9 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 8 0 1 44.024 44.024 2 0.019971 11114 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.264 62.825 48.908 35.305 45.781 36.496 64.693 47.19 46 37 46 37 65 46 1 1 1 1 1 1 2573 1979 1813 1939 4607 5283 5283 1 ASWTRPEK Unmodified 973.49813 0.49812931 74 A0A0A6YY91 Ncam1 yes yes 0 0 0 1 8 0 1 39.314 39.314 3 0.0094783 8869 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.783 15.225 654.56 542.8 978.08 944.8 1061.2 944.04 618 567 976 936 1087 914 1 1 1 1 1 1 35515 1980 74 1940 4608 5284 5284 1 ASYAVSEAIPK Unmodified 1134.5921 0.59208927 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 6 0 1 56.437 56.437 3 0.00056432 18396 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.143 51.367 119.1 0 0 69.87 62.462 67.508 111 0 0 65 65 65 1 0 0 1 1 1 4301.5 1981 1967 1941 4609 5285 5285 1 ASYGVSK Unmodified 710.3599 0.35990449 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 9.33 2.62 1 1 1 40.219 40.219 2 0.024851 9367 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.33 49.755 236.37 314.77 266.16 92.139 427.66 155.27 222 315 260 93 418 148 2 3 2 1 3 1 44831 1982 2714 1942 4610;4611;4612 5286;5287;5288 5287 3 ASYYEILDVPR Acetyl (Protein N-term) 1366.6769 0.67688153 3278 Q9QYI5;A0A087WR37;A0A087WPZ9 Dnajb2 DnaJ homolog subfamily B member 2 yes no 1 0 0 0 4 0 1 82.953 82.953 2 0.0016012 31439 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.632 41.694 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1854.1 1983 3278 1943 4613 5289;5290 5289 2 ASYYVVSGNDPANGEPSR Deamidation (N) 1882.8333 0.83333519 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 6.5 3.77 2 1 1 51.325 51.325 3 1.7775E-09 16705 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.14 95.651 9 28.843 56.786 65.601 73.651 46.934 9 28 56 66 74 46 1 1 1 2 1 1 15473 1984 510 1944 4614;4615;4616;4617 5291;5292;5293;5294 5293 132 4 ATAAFILANEHNVALFK Unmodified 1828.9836 0.98356866 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 10.3 0.471 2 1 75.578 75.578 3;4 7.6228E-06 22479 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.866 67.855 94.246 35.328 47.217 148.64 82.998 77.325 88 37 46 140 84 74 2 1 1 3 2 2 12346 1985 2422 1945 4618;4619;4620 5295;5296;5297 5297 3 ATADDELSFK Unmodified 1095.5084 0.50841922 585 Q60631;B1AT92;B1AT95 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 4.5 0.5 1 1 57.522 57.522 2;3 5.6245E-05 19835 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.53 57.953 109.45 38.906 27.645 67.087 122.85 18.61 102 37 28 65 121 19 1 1 1 2 2 1 15078 1986 585 1946 4621;4622 5298;5299 5298 2 ATAEEISSK Unmodified 934.46074 0.46074075 2912 Q9CQ62 Decr1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 42.237 42.237 2;3 0.0055776 12201 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.823 26.879 39.348 0 59.258 25.485 84.375 37.034 37 0 56 28 83 37 1 0 1 1 1 1 2788.1 1987 2912 1947 4623;4624 5300;5301 5301 2 ATAENEFVALKK Unmodified 1319.7085 0.70851601 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Krt86;5430421N21Rik;Krt81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 yes no 0 0 0 1 7 0 1 57.531 57.531 3 0.00054034 18076 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.91 8.8178 49.358 0 0 49.075 63.978 599.4 46 0 0 46 83 564 1 0 0 1 1 1 6061 + 1988 648 1948 4625 5302 5302 1 ATAEQLK Unmodified 759.41267 0.41266834 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 8.17 3.48 2 1 1 2 40.568 40.568 2;3 0.0095859 11487 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.847 38.608 1018.9 1158.2 896.97 306.25 749.76 714.83 960 1163 876 306 734 683 6 5 5 2 4 4 153810 1989 1321 1949 4626;4627;4628;4629;4630;4631 5303;5304;5305;5306;5307;5308 5304 6 ATAFGILNGLCK Deamidation (N) 1264.6486 0.64855829 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 1 0 0 9 0 2 77.15 77.15 3 0.037965 27260 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.159 9.1771 0 29.792 0 61.208 0 58.442 0 28 0 56 0 56 0 1 0 1 0 2 10445 1990 2370 1950 4632;4633 5309;5310 5310 921 2 ATAFGILNGLCK Unmodified 1263.6645 0.66454271 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 12 0 1 76.966 76.966 3 0.015366 20626 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.991 10.101 0 28.808 58.864 0 38.702 0 0 28 56 0 37 0 0 1 1 0 1 0 7503.6 1991 2370 1950 4634 5311 5311 1 ATAGAPPDSSLVTYELHSRPEQDK Unmodified 2568.2456 0.2456096 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 1 4 0 1 54.36 54.36 4 3.1657E-15 18384 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.373 62.329 39.268 45.727 34.018 69.018 0 0 37 46 37 65 0 0 1 1 1 1 0 0 6000 1992 2844 1951 4635 5312 5312 1 ATAGAYIASQTVK Unmodified 1279.6772 0.67721588 1243 O55234 Psmb5 Proteasome subunit beta type-5 yes yes 0 0 0 0 8.5 0.5 1 1 53.987 53.987 2 2.0365E-15 15732 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.91 80.469 19.982 106.57 36.422 58.176 45.769 28.542 19 102 37 56 46 28 1 2 1 2 1 1 6290.8 1993 1243 1952 4636;4637 5313;5314 5313 2 ATAGDTHLGGEDFDNR Unmodified 1674.7234 0.72339081 1407;1394 Q61696;P17879;P16627 Hspa1a;Hspa1b;Hspa1l Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 3 0 1 41.761 41.761 3 1.8655E-05 12909 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.836 79.733 49.225 26.473 0 60.115 0 29.848 46 28 0 55 0 28 1 1 0 1 0 1 13887 1994 1407;1394 1953 4638 5315 5315 1 ATALSEEELDNEDYYSLLNVR Acetyl (Protein N-term) 2485.1496 0.14964353 930 E9Q8B3;Q5U458 Dnajc11 DnaJ homolog subfamily C member 11 yes no 1 0 0 0 2.5 0.5 1 1 92.387 92.387 3 2.4916E-11 29542 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.763 49.035 0 2.128 0 3.186 0 1.066 0 2 0 3 0 1 0 1 0 2 0 1 2845.3 1995 930 1954 4639;4640 5316;5317 5316 2 ATAMAASAAER Acetyl (Protein N-term) 1090.5077 0.50770771 1916 Q3TDK6 Rogdi Protein rogdi homolog yes yes 1 0 0 0 1 0 1 45.094 45.094 2 6.3267E-08 13197 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.365 46.628 0 20.216 0 9.837 0 20.254 0 19 0 9 0 19 0 1 0 1 0 1 21457 1996 1916 1955 4641 5318 5318 1 ATAPYNYSYIFK Acetyl (Protein N-term) 1478.7082 0.70818166 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 1 0 0 0 9.25 2.28 1 1 1 1 84.142 84.142 2 1.4774E-07 32798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.015 79.744 78.874 87.943 174.56 67.681 27.237 58.919 74 84 167 65 28 56 2 2 3 2 1 2 27611 1997 2729 1956 4642;4643;4644;4645 5319;5320;5321;5322 5322 4 ATAQEAQSLGGR Unmodified 1187.5895 0.58946351 2851 Q99L04 Dhrs1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 0 4.5 0.5 1 1 37.009 37.009 2 2.1744E-05 10110 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.09 66.823 39.701 0 19.685 60.035 0 0 37 0 19 56 0 0 1 0 1 2 0 0 8315.5 1998 2851 1957 4646;4647 5323;5324 5323 2 ATASSSAQEMEQQLAER Unmodified 1835.832 0.83195498 2462 Q8BV13 Cops7b COP9 signalosome complex subunit 7b yes yes 0 0 0 0 2 0 1 55.061 55.061 3 9.7905E-05 18461 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.894 44.289 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 1622.8 1999 2462 1958 4648 5325 5325 1 ATATTSQPVLTIQQIETIFYK Unmodified 2352.2577 0.25767783 816 E9PUE7;Q5SSL4;Z4YN68;H3BKT3;H3BKV6 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 8.5 0.5 1 1 95.31 95.31 3 2.6691E-19 34435 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.352 70.071 20.246 0 23.702 0 12.552 0 19 0 22 0 12 0 1 0 1 0 1 0 2568.4 2000 816 1959 4649;4650 5326;5327 5326 2 ATAVDITTSK Unmodified 1005.5342 0.53424004 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 6 0.816 1 1 1 50.087 50.087 2 1.7289E-05 15363 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.91 79.369 276.67 204.39 214.27 275.58 243.16 165.44 260 213 222 268 250 158 3 3 3 3 3 1 27265 2001 2585 1960 4651;4652;4653 5328;5329;5330 5329 3 ATAVLAK Unmodified 672.41703 0.41702544 3014 Q9CZY3;B7ZBY7;E9PY39 Ube2v1;Gm20431 Ubiquitin-conjugating enzyme E2 variant 1 yes no 0 0 0 0 8.67 0.471 1 2 47.639 47.639 2;3 0.011479 12066 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.89 57.045 491.94 289.92 750.84 186.9 274.34 632.84 464 290 720 185 278 601 3 2 3 1 1 2 132240 2002 3014 1961 4654;4655;4656 5331;5332;5333 5333 3 ATAVMPDGQFK Unmodified 1163.5645 0.56449431 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 9 2.94 1 1 1 56.727 56.727 2;3 1.0717E-08 17173 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.249 51.358 206.5 100.95 193.07 0 157.24 203.38 194 111 185 0 157 195 2 2 2 0 2 2 23053 2003 604 1962 4657;4658;4659 5334;5335;5336 5335 3 ATAVPDSLCK Unmodified 1060.5223 0.52229515 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6.33 0.471 2 1 51.989 51.989 2;3 4.8041E-07 16257 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.33 75.889 23.218 81.982 153.04 70.617 106.07 106.41 22 80 149 71 108 102 1 2 3 2 3 2 16913 2004 3449;3451 1963 4660;4661;4662 5337;5338;5339 5337 3 ATCEGDTVPDFQETRPR Unmodified 1977.8851 0.88505318 533 A2AWI7 Sh3glb2 yes yes 0 0 0 1 2 0 1 46.154 46.154 3 6.6261E-08 14442 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.82 91.331 20.089 27.997 26.335 48.939 45.868 0 19 28 28 47 46 0 1 1 1 1 1 0 7095.7 2005 533 1964 4663 5340 5340 1 ATDAEADVASLNR Unmodified 1331.6317 0.63172225 905;1656;471 E9Q452;E9Q454;Q8BSH3;P58771;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin beta chain no no 0 0 0 0 2.5 0.5 1 1 49.696 49.696 2;3 2.2919E-13 15983 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 128.88 80.24 59.666 27.469 47.633 28.559 45.845 58.388 56 28 47 28 47 56 2 1 2 1 2 2 8861.6 + 2006 905;1656;471 1965 4664;4665 5341;5342 5341 2 ATDCVGHDVATLLR Unmodified 1526.7511 0.75112588 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 59.027 59.027 2;3 1.3578E-17 19729 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 133.13 101.74 97.422 167.15 237.21 131.28 230.39 182.11 92 167 232 130 232 176 2 3 2 2 3 2 67124 2007 1055 1966 4666;4667;4668;4669 5343;5344;5345;5346 5344 4 ATDELASK Acetyl (Protein N-term) 875.42363 0.42362696 2510 Q8C845;Q9D8Y0 Efhd2 EF-hand domain-containing protein D2 yes no 1 0 0 0 2 0 1 50.334 50.334 2 0.010728 16243 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.029 11.456 158.14 57.434 63.59 56.041 73.217 46.947 148 65 65 56 74 46 1 1 1 1 1 1 16769 2008 2510 1967 4670 5347 5347 1 ATDFVVDR Unmodified 921.4556 0.45559579 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 7.33 4.03 1 1 1 49.573 49.573 2 0.0021074 15919 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.72 80.396 286.25 163.67 261.92 182.72 81.113 372.92 269 167 260 176 83 352 3 2 3 2 1 3 40690 2009 1618 1968 4671;4672;4673 5348;5349;5350 5349 3 ATDFVVPGPGK Unmodified 1086.571 0.5709599 1278 O88844;A0A087WPT4;A0A087WRS9 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 7 0 1 60.47 60.47 2 5.9553E-05 19474 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.048 67.478 39.413 0 48.393 26.494 65.153 47.177 37 0 46 28 65 46 1 0 1 1 1 1 9153 2010 1278 1969 4674 5351 5351 1 ATDISESSGADCK Acetyl (Protein N-term) 1381.5667 0.56673874 873 E9Q0G1;Q9CQJ6 Denr Density-regulated protein yes no 1 0 0 0 1 0 2 47.442 47.442 2;3 0.00052071 14148 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.359 43.306 69.186 62.649 110.43 124.84 44.032 107.48 65 65 111 121 46 102 1 2 2 2 1 2 9873.8 2011 873 1970 4675;4676 5352;5353 5352 2 ATDLFDELVAHEVAR Unmodified 1684.842 0.84204938 2261 Q6ZPE2 Sbf1 Myotubularin-related protein 5 yes yes 0 0 0 0 4.5 0.5 1 1 79.084 79.084 3 0.00070194 29762 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.862 36.257 49.273 16.894 0 0 28.62 19.437 46 19 0 0 28 19 1 1 0 0 1 1 3078.2 2012 2261 1972 4677;4678 5354;5355 5355 2 ATDLGEPER Unmodified 986.46689 0.46688876 746 D3Z0V7;E9QLZ1;P62500 Tsc22d1 TSC22 domain family protein 1 yes no 0 0 0 0 2 0 1 37.8 37.8 2 0.045953 10814 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.81 16.765 0 38.428 56.234 46.074 45.348 18.96 0 37 56 46 46 19 0 1 1 1 1 1 2714.6 2013 746 1973 4679 5356 5356 1 ATDLLLDDSLVSLFGNR Unmodified 1847.9629 0.9628928 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 9.12 2.42 1 1 2 2 2 98.853 98.853 2;3 1.2429E-140 36218 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 250.46 220.73 131.93 67.654 204.74 82.85 203.74 155.77 124 73 197 86 204 149 4 4 7 4 5 5 160810 2014 1867 1974 4680;4681;4682;4683;4684;4685;4686;4687 5357;5358;5359;5360;5361;5362;5363;5364;5365;5366 5358 10 ATDLLLDDSLVSLFGNR Deamidation (N) 1848.9469 0.94690838 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 1 0 0 7 0 1 100.92 100.92 3 0.021711 36681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.088 21.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1275.3 2015 1867 1974 4688 5367 5367 757 1 ATDLLLDDSLVSLFGNRR Unmodified 2004.064 0.064003825 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 1 8 0.816 1 1 1 88.678 88.678 3 6.1728E-07 32064 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.284 74.147 59.723 21.173 43.385 20.767 64.13 51.47 56 22 41 19 63 50 3 2 2 1 2 2 25922 2016 1867 1975 4689;4690;4691 5368;5369;5370 5369 3 ATDQVVALACAFNK Unmodified 1506.7501 0.75006325 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 10 2.16 1 1 1 76.005 76.005 3 6.9271E-05 25420 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.729 62.478 167.71 106.2 111.71 234.24 92.689 118.33 157 111 111 222 93 111 2 2 2 3 1 2 25583 2017 2054 1976 4692;4693;4694 5371;5372;5373 5372 3 ATDSWALAVDEQEAAVK Acetyl (Protein N-term) 1844.8792 0.87922275 2134 Q61655 Ddx19a ATP-dependent RNA helicase DDX19A yes yes 1 0 0 0 2.5 0.5 1 1 82.206 82.206 3 3.0032E-05 30733 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.024 31.048 16.063 2.709 3.0512 0 11.648 26.318 15 3 3 0 12 25 2 1 1 0 2 2 3115.5 2018 2134 1977 4695;4696 5374;5375 5375 2 ATEAAPQPHEASGEAEATEQAPDVSEQADTSK Unmodified 3251.4338 0.43381689 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 1.67 0.471 1 2 45.884 45.884 4;5 1.4259E-09 14382 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.867 42.762 20.387 19 0 30.604 29.288 20.254 19 19 0 28 28 19 1 1 0 1 1 1 7660.9 2019 2701 1978 4697;4698;4699 5376;5377;5378 5378 3 ATEAGSLEAR Unmodified 1003.4934 0.49343786 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 0 2.5 0.5 1 1 35.669 35.669 2 5.1373E-05 9929 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.1 70.7 39.587 78.736 19.075 108.34 106.8 125.94 37 74 19 102 111 121 1 1 1 2 2 2 11282 2020 1115 1979 4700;4701 5379;5380 5380 2 ATEDQMR Unmodified 849.36507 0.36506622 1076 G3X8X7;Q920Q4 Vps16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 0 2 0 1 27.097 27.097 2 0.038668 5829 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.741 33.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2021 1076 1980 4702 5381 5381 1 ATEEQLK Unmodified 817.41815 0.41814765 656 CON__P02769 yes yes 0 0 0 0 7.33 4.03 1 1 1 39.978 39.978 2 0.017956 11514 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.86 31.366 62.689 40.541 710.82 110.96 50.124 97.708 60 46 699 116 56 93 1 1 2 1 1 1 28088 + 2022 656 1981 4703;4704;4705 5382;5383;5384 5382 3 ATEGLAGALATVLGGK Acetyl (Protein N-term) 1469.809 0.80895834 378 A0A2I3BQ34;Q3U2V3 Nudt18 8-oxo-dGDP phosphatase NUDT18 yes no 1 0 0 0 8.5 0.5 1 1 105.64 105.64 2 6.6209E-24 36557 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.44 40.698 19.29 4.6704 0 0 17.782 0 18 5 0 0 17 0 2 1 0 0 2 0 1817.2 2023 378 1982 4706;4707 5385;5386 5385 2 ATEGLYQANHK Unmodified 1230.5993 0.59929991 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 6 0 1 39.161 39.161 3 0.055087 10294 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.952 17.339 0 48.323 37.135 0 19.874 0 0 46 37 0 19 0 0 1 1 0 1 0 2713.8 2024 2499 1983 4708 5387 5387 1 ATEGMVVADK Unmodified 1019.4957 0.49574604 1800 P70195 Psmb7 Proteasome subunit beta type-7 yes yes 0 0 0 0 5 0 1 49.76 49.76 2 0.00018857 15899 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.04 44.473 0 29.033 45.424 58.501 0 59.696 0 28 46 56 0 56 0 1 1 1 0 1 3090.1 2025 1800 1984 4709 5388 5388 1 ATEGSGSVR Unmodified 862.41446 0.41445926 2523 Q8CCJ3 Ufl1 E3 UFM1-protein ligase 1 yes yes 0 0 0 0 3 0 1 22.544 22.544 2 0.01466 4020 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.825 18.137 20.27 0 19.583 19.6 0 20.254 19 0 19 19 0 19 1 0 1 1 0 1 1100 2026 2523 1985 4710 5389 5389 1 ATEILNLLLK Unmodified 1126.6962 0.69616041 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 11.5 0.5 1 1 93.67 93.67 2;3 0.0013174 30188 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.006 22.583 88.643 27.124 46.922 58.411 37.054 136.46 83 28 46 56 37 129 2 1 1 1 1 2 12548 2027 1481 1986 4711;4712 5390;5391 5390 2 ATENDIANFFSPLNPIR Deamidation (N) 1918.9425 0.94249171 709 D3YWT1;D3Z3N4 Hnrnph3 yes no 0 1 0 0 7 0 1 87.891 87.891 3 0.0026828 32379 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.141 29.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2028 709 1987 4713 5392 5392 199 1 ATENDIANFFSPLNPIR Unmodified 1917.9585 0.95847612 709 D3YWT1;D3Z3N4 Hnrnph3 yes no 0 0 0 0 8 0 1 87.659 87.659 3 1.1572E-06 31748 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.545 65.514 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 5710.3 2029 709 1987 4714 5393 5393 1 ATENDIYNFFSPLNPMR Unmodified 2027.9411 0.9411115 1808 P70333 Hnrnph2 Heterogeneous nuclear ribonucleoprotein H2 yes yes 0 0 0 0 8.5 0.5 1 1 89.524 89.524 3 3.8417E-06 31527 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.932 58.319 36.238 21.965 22.406 9.2942 48.735 0 34 22 22 9 47 0 2 1 1 1 2 0 8846.5 2030 1808 1988 4715;4716 5394;5395 5395 2 ATENDIYNFFSPLNPVR Deamidation (N) 1996.9531 0.95305639 1209;3401 O35737;Q8C2Q7;Q9Z2X1 Hnrnph1;Hnrnpf Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 1 0 0 7 0.707 1 2 1 88.886 88.886 3 0.00030766 33498 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.827 45.463 9.622 0 5.8748 12.766 28 0 9 0 6 12 28 0 1 0 1 1 1 0 2976.8 2031 1209;3401 1989 4717;4718;4719;4720 5396;5397;5398;5399 5396 330 4 ATENDIYNFFSPLNPVR Unmodified 1995.969 0.96904081 1209;3401 O35737;Q8C2Q7;Q9Z2X1 Hnrnph1;Hnrnpf Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 0 9.4 2.06 1 1 1 1 1 87.416 87.416 2;3 7.5158E-14 34369 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.96 104.89 59.958 83.689 55.271 39.272 94.631 66.858 56 83 53 37 92 65 1 4 3 2 2 2 40888 2032 1209;3401 1989 4721;4722;4723;4724;4725 5400;5401;5402;5403;5404 5404 5 ATEPQGEPGR Unmodified 1040.4887 0.48868683 139 A0A0N4SW73 yes yes 0 0 0 0 2 0 1 27.807 27.807 2 0.0084186 6152 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.847 40.638 34.189 0 24.714 0 38.702 0 32 0 23 0 37 0 1 0 1 0 1 0 3069.6 2033 139 1990 4726 5405 5405 1 ATESLQEVSGPK Unmodified 1244.6248 0.62484596 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 4.67 0.471 1 2 50.13 50.13 2;3 1.0661E-12 16057 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 126.71 89.16 117.77 166.5 194.23 228.7 125.84 224.53 111 167 194 222 130 214 1 3 2 3 1 3 24868 2034 2028 1991 4727;4728;4729 5406;5407;5408 5408 3 ATETAEEEDDQPLSLSWPTNTR Unmodified 2489.1194 0.11940603 1902 Q14BI1;Q8BUN9 Slc24a2 yes no 0 0 0 0 3.5 0.5 1 1 69.596 69.596 3 5.9947E-16 25104 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.913 85.331 50.194 0 39.781 0 0 0 47 0 37 0 0 0 2 0 2 0 0 0 15231 2035 1902 1992 4730;4731 5409;5410 5410 2 ATEVHNLQELR Acetyl (Protein N-term) 1350.6892 0.68917755 3061 Q9D428 GOLGA7B Golgin subfamily A member 7B yes yes 1 0 0 0 2 0 1 51.155 51.155 2 6.0076E-10 16688 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.334 45.886 0 29.792 0 40.441 0 39.442 0 28 0 37 0 37 0 1 0 1 0 1 4521 2036 3061 1993 4732 5411 5411 1 ATFDAISK Unmodified 851.43888 0.43888309 1449 P25444;D3YVC1;D3YWJ3 Rps2 40S ribosomal protein S2 yes no 0 0 0 0 9.33 2.62 1 1 1 55.35 55.35 2 0.010452 17178 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.431 49.688 315.26 345.38 472.13 146.49 358.57 547.29 297 352 463 148 363 523 2 3 3 1 2 3 28336 2037 1449 1994 4733;4734;4735 5412;5413;5414 5412 3 ATFDISLVVPK Unmodified 1188.6754 0.67542497 1899 Q11011;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 9.86 1.25 1 2 2 1 1 80.313 80.313 2;3 1.1083E-07 24736 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.573 61.195 148.14 195.93 189.93 146.86 76.1 0 139 194 185 140 74 0 4 5 4 5 2 0 44546 2038 1899 1995 4736;4737;4738;4739;4740;4741;4742 5415;5416;5417;5418;5419;5420;5421;5422 5421 8 ATFEEVSVLGFEEFDK Acetyl (Protein N-term) 1887.8778 0.87782576 2934 Q9CQM5 Txndc17 Thioredoxin domain-containing protein 17 yes yes 1 0 0 0 4.5 0.5 1 1 104.63 104.63 3 2.7447E-17 34941 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.193 30.53 3.1998 3.192 3.2299 4.2183 8.1742 3.198 3 3 3 4 8 3 1 1 1 1 1 1 1846 2039 2934 1996 4743;4744 5423;5424 5423 2 ATFSPIVTLEPR Unmodified 1329.7293 0.72925145 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 8.5 0.5 1 1 70.486 70.486 3 5.3941E-05 23525 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.641 53.108 39.701 0 40.034 29.743 75.057 28.542 37 0 37 28 74 28 1 0 1 1 2 1 20029 2040 3449;3451 1997 4745;4746 5425;5426 5425 2 ATFYLLIGSANAAKPDLDK Unmodified 2007.0677 0.06769222 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 1 11 0 1 80.074 80.074 3 0.00017061 24667 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.866 42.945 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 7376.8 2041 3012 1998 4747 5427 5427 1 ATFYLNVLEQK Unmodified 1324.7027 0.70270235 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 9 0 1 78.695 78.695 3 0.00063786 26766 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.652 46.004 0 39.368 0 0 0 39.442 0 37 0 0 0 37 0 1 0 0 0 1 3503.3 2042 3291 1999 4748 5428 5428 1 ATFYLNVLQQR Unmodified 1351.7248 0.72483478 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 0 12 0 1 72.856 72.856 2 7.3777E-09 18822 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.61 84.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2043 3265 2000 4749 5429 5429 1 ATGGPAVFQKPVK Unmodified 1298.7347 0.73467118 1061 G3UXM5;G3UWV4;Q69Z98;G3UZ19;G3UYN4;G3UXY1;G3UZN4 Brsk2 Serine/threonine-protein kinase BRSK2 yes no 0 0 0 1 10 0 1 51.926 51.926 3 0.0004339 12448 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.082 51.525 78.502 81.647 82.056 55.13 63.14 67.488 74 83 83 56 65 65 1 1 1 1 1 1 5318.9 2044 1061 2001 4750 5430 5430 1 ATGGPYGSLGVDYEFEK Unmodified 1788.8206 0.82064524 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 5.5 0.5 1 1 69.989 69.989 3 6.6398E-09 25349 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.47 93.046 128.6 198.37 309.92 339.88 356.7 154.25 121 194 306 334 361 149 3 4 4 5 5 2 27829 2045 2585 2002 4751;4752 5431;5432;5433;5434;5435 5431 5 ATGLTILQSGIRPK Unmodified 1453.8617 0.86166261 1828 Q3UU93;P80560 Ptprn2 Receptor-type tyrosine-protein phosphatase N2 yes no 0 0 0 1 12 0 1 61.426 61.426 3 0.00037519 14740 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.624 41.709 61.684 41.701 57.173 62.172 0 67.158 58 44 58 60 0 63 1 1 1 1 0 1 6328.4 2046 1828 2003 4753 5436 5436 1 ATGPAPGPSVDR Unmodified 1123.5622 0.56218613 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 7.33 4.03 1 1 1 35.585 35.585 2 1.4352E-07 9157 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.16 69.493 109.12 64.479 0 0 0 148.17 102 65 0 0 0 139 2 1 0 0 0 2 28150 2047 2295 2004 4754;4755;4756 5437;5438;5439 5439 3 ATGPAPGPSVDRETVAAPGR Unmodified 1904.9704 0.97043779 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 7.33 4.03 1 1 1 41.161 41.161 3 4.6782E-11 12046 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.78 85.722 49.074 56.275 28.6 87.316 90.317 85.901 46 56 28 83 93 83 1 1 1 2 2 2 21060 2048 2295 2005 4757;4758;4759 5440;5441;5442 5440 3 ATGQPYEQYAK Unmodified 1254.5881 0.58806652 2306;171 Q80TZ3;A0A0R4J0F6;Q99KY4;F6SLK1 Dnajc6;Gak Putative tyrosine-protein phosphatase auxilin;Cyclin-G-associated kinase no no 0 0 0 0 5 0 1 46.757 46.757 3 0.00068719 14370 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.488 51.816 78.946 23.52 56.763 45.338 82.766 57.334 74 28 56 46 83 56 1 1 1 1 1 1 6806 2049 2306;171 2006 4760 5443 5443 1 ATGQSHKPVPPTQVQK Unmodified 1701.9162 0.91621738 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 1 8.5 0.5 1 1 38.024 38.024 4 4.9032E-05 8370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.128 76.639 88.874 36.703 0 80.882 0 59.696 83 37 0 74 0 56 2 1 0 2 0 1 9421.6 2050 2301;365 2007 4761;4762 5444;5445 5444 2 ATGVSAEDADPR Unmodified 1187.5418 0.54184461 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 36.039 36.039 2 0.00010314 10208 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.598 67.704 89.64 26.4 89.426 28.366 83.218 97.33 84 28 84 28 84 93 2 1 2 1 3 2 22964 2051 2028 2008 4763;4764;4765;4766 5446;5447;5448;5449 5447 4 ATGYPQTEGLLGDCMLK Unmodified 1852.8699 0.86992039 169 J3QQ44;A0A0R4J0B8;Q62421 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 6 0 1 72.53 72.53 3 0.053163 26024 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.152 9.7706 20.195 38.006 0 0 0 0 19 37 0 0 0 0 1 1 0 0 0 0 2625.9 2052 169 2009 4767 5450 5450 1 ATGYQELPDWPEEAPDPSVR Unmodified 2256.0335 0.033491558 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 2.5 0.5 1 1 70.242 70.242 3 6.3459E-10 25912 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.467 69.809 9.657 0 0 6.558 0 12.792 9 0 0 6 0 12 1 0 0 1 0 1 10049 2053 3249 2010 4768;4769 5451;5452 5452 2 ATIAGGGVIPHIHK Unmodified 1369.783 0.78301836 1338 Q3THW5;P0C0S6;Q8R029;Q3UA95 H2afv;H2afz Histone H2A.V;Histone H2A.Z;Histone H2A yes no 0 0 0 0 13 0 1 49.813 49.813 4 0.00015536 16200 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.716 46.624 0 0 0 0 178.16 172.94 0 0 0 0 176 167 0 0 0 0 1 1 11696 2054 1338 2011 4770 5453 5453 1 ATIGADFLTK Unmodified 1035.5601 0.56006086 1600 P51150;A0A0N4SVG9;A0A0N4SVR6 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 10 2.16 1 1 1 68.074 68.074 2;3 3.744E-07 22451 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.98 81.429 0 212.81 254.12 81.063 267.74 288.71 0 204 250 83 269 278 0 2 2 1 2 2 30410 2055 1600 2012 4771;4772;4773 5454;5455;5456 5454 3 ATIQDVLR Unmodified 914.51853 0.5185304 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 7 0 1 56.887 56.887 2 0.0092074 17727 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.84 52.08 0 115.98 126.94 151.85 124.73 124.36 0 111 130 148 130 120 0 1 1 1 1 1 28049 2056 1401 2013 4774 5457 5457 1 ATIQGVLR Unmodified 856.51305 0.51305109 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 8 0.816 1 1 1 50.419 50.419 2 0.0085837 14820 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.46 24.286 298.28 240.31 603.75 662.82 793.64 431.1 281 242 600 653 802 418 2 1 3 3 3 2 78726 2057 1400 2014 4775;4776;4777 5458;5459;5460 5458 3 ATISALEAK Unmodified 902.5073 0.50729701 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 6.5 0.5 1 1 56.291 56.291 2 0.00053458 17489 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.35 74.258 88.12 91.671 177.9 147.78 179.76 202.74 83 93 176 148 185 195 1 1 2 2 2 2 9809.9 2058 1974 2015 4778;4779 5461;5462 5462 2 ATISNDGATILK Unmodified 1202.6507 0.65066678 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 8.67 3.09 1 1 1 57.127 57.127 2 1.2223E-11 17989 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.02 75.86 167.5 89.527 85.122 107.16 147.29 106.14 157 93 83 102 149 102 3 2 2 2 3 2 17529 2059 1822 2016 4780;4781;4782 5463;5464;5465 5464 3 ATITCTR Acetyl (Protein N-term) 863.4171 0.41710179 1355 P11798;F8WIS9;D3Z7K9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 1 0 0 0 5.33 5.44 1 1 1 35.408 35.408 2 0.0059416 9316 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.068 84.636 167.85 20.216 121.29 163.36 172 173.11 157 19 121 158 176 167 2 1 2 1 1 3 58162 2060 1355 2017 4783;4784;4785 5466;5467;5468;5469 5467 4 ATIVSLEDFEQR Unmodified 1406.7042 0.70415892 3187 Q9ERR1 Ndel1 Nuclear distribution protein nudE-like 1 yes yes 0 0 0 0 5 0 1 70.974 70.974 3 0.019032 25834 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.063 30.172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2061 3187 2018 4786 5470 5470 1 ATLEEAR Unmodified 788.40283 0.40283194 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 3 0 1 34.129 34.129 2 0.012751 9234 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.18 68.118 158.21 117.01 0 140.03 109.67 0 148 120 0 130 111 0 1 1 0 1 1 0 33217 2062 1899 2019 4787 5471 5471 1 ATLEMVNHEK Unmodified 1170.5703 0.57030797 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8 3.56 1 1 1 45.768 45.768 3 1.1517E-05 13886 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.24 73.725 425.71 101.68 320.36 128.69 246.96 281.84 399 102 309 130 251 271 3 1 3 1 2 2 46191 2063 154 2020 4788;4789;4790 5472;5473;5474 5474 3 ATLEQPETDEVEQVSESNSIEELER Unmodified 2860.3098 0.30978558 1225 O54988 Slk STE20-like serine/threonine-protein kinase yes yes 0 0 0 0 1 0 1 69.827 69.827 3 4.5198E-20 23698 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.09 74.003 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7196.7 2064 1225 2021 4791 5475 5475 1 ATLLLEHVER Unmodified 1179.6612 0.66117189 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;Q8BYJ0;E9Q7Y2;Q8C028 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 6.5 0.5 1 1 55.432 55.432 3 3.4501E-05 17035 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.943 75.386 69.5 27.776 17.679 90.758 0 20.254 65 28 19 84 0 19 2 1 1 2 0 1 6895.2 2065 2753 2023 4792;4793 5476;5477 5477 2 ATLNLSLLK Unmodified 971.60153 0.60153174 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 10 0 1 72.857 72.857 3 0.00092688 21880 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.862 26.907 78.502 81.646 82.096 54.233 110.68 85.32 74 83 83 56 111 83 1 1 1 1 1 1 9568.1 2066 1608 2024 4794 5478 5478 1 ATLNPVWNETFVFNLK Unmodified 1891.9832 0.98323431 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 10 0 1 91.283 91.283 3 0.005996 29698 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.912 20.959 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2067 1783 2025 4795 5479 5479 1 ATLNPVWNETFVFNLKPGDVER Unmodified 2545.2965 0.29652296 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 1 10.3 1.97 1 2 1 2 84.133 84.133 3;4 1.0178E-15 30029 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.583 83.591 117.72 180.98 138.07 204.62 92.61 108.18 111 176 139 196 93 102 3 4 3 5 3 2 93826 2068 1783 2026 4796;4797;4798;4799;4800;4801 5480;5481;5482;5483;5484;5485 5480 6 ATLPDADKER Unmodified 1114.5619 0.56185177 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 6 0 1 39.876 39.876 3 3.7601E-05 10627 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.1 60.014 147.16 164.5 195.13 190.58 0 187.62 139 167 198 185 0 176 1 1 1 1 0 1 9960.6 2069 418 2027 4802 5486 5486 1 ATLPEADGER Unmodified 1057.504 0.50400254 3209 Q9JI91;A0A1Y7VMW4 Actn2 Alpha-actinin-2 yes no 0 0 0 0 2.5 0.5 1 1 40.418 40.418 2 0.00013195 12181 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.07 70.838 48.892 0 78.291 34.349 75.826 0 46 0 74 37 74 0 1 0 1 1 1 0 8209.9 2070 3209 2028 4803;4804 5487;5488 5488 2 ATLPSPDKLPGFK Unmodified 1369.7606 0.76055158 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 1 10 1.67 1 1 2 1 64.702 64.702 3;4 0.0003197 18154 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.845 56.301 471.35 354.99 608.54 873.53 408.89 1137.5 444 361 597 838 423 1078 4 4 3 4 2 6 137480 2071 1876 2029 4805;4806;4807;4808;4809 5489;5490;5491;5492;5493;5494 5493 6 ATLQAALCLENFSSQVVER Unmodified 2135.0681 0.068102925 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 0 7 3.94 1 1 1 1 84.879 84.879 3 3.6115E-10 31010 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.65 92.055 29.87 0 29.298 19.021 37.714 47.772 28 0 28 19 37 47 1 0 1 1 1 2 19863 2072 1663 2030 4810;4811;4812;4813 5495;5496;5497;5498 5496 4 ATLQESEVK Acetyl (Protein N-term) 1045.5292 0.52915466 2872 Q99MN1 Kars Lysine--tRNA ligase yes yes 1 0 0 0 1.5 0.5 1 1 52.224 52.224 2 0.0012116 17276 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.598 34.042 0 78.422 18.789 0 65.345 106.87 0 74 19 0 65 102 0 2 1 0 1 2 8671.4 2073 2872 2031 4814;4815 5499;5500 5500 2 ATLSLLER Unmodified 901.52328 0.52328142 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YE00;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 7.5 0.5 1 1 59.968 59.968 2 0.0056434 18584 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.41 57.635 118.4 139.91 0 176.25 333.88 276.16 111 139 0 167 336 268 1 1 0 2 2 2 35026 2074 2301;365;912 2032 4816;4817 5501;5502 5502 2 ATLVKPTPVNVPVSQK Unmodified 1676.9825 0.98250603 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 1 10.5 0.5 1 1 56.92 56.92 3;4 1.3773E-11 14288 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.03 112.97 199.78 140.54 207.19 189.1 307.39 204.95 188 148 208 188 313 198 1 1 1 1 2 1 24022 2075 3327 2033 4818;4819 5503;5504 5504 2 ATLWYVPLSLK Unmodified 1289.7384 0.73835958 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 5.86 5.62 4 2 1 88.281 88.281 2;3 2.6203E-33 31287 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 192.64 119.76 922.15 763.52 1384.1 1253.2 1474.7 1557.7 865 752 1358 1240 1506 1499 14 12 10 13 13 13 553790 2076 852 2034 4820;4821;4822;4823;4824;4825;4826 5505;5506;5507;5508;5509;5510;5511;5512;5513;5514;5515;5516;5517;5518;5519;5520;5521;5522;5523 5508 19 ATMEAYSR Unmodified 927.41202 0.41201641 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 5 0 1 37.686 37.686 2 0.050541 9986 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.419 46.054 0 0 40.034 0 27.631 48.248 0 0 37 0 28 46 0 0 1 0 1 1 2982.7 2077 372 2035 4827 5524 5524 1 ATMGLAGK Unmodified 747.39491 0.39490979 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 0 9 0 1 48.593 48.593 2 0.051866 12502 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.88 14.093 98.755 60.453 122.51 71.887 90 115.76 93 65 120 74 93 111 1 1 1 1 1 1 3993.8 2078 3121 2036 4828 5525 5525 1 ATNIEVLSNTFQFTNEAR Unmodified 2054.0069 0.006882877 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 7 0 1 76.672 76.672 3 0.0010773 27076 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.016 36.162 48.955 35.437 37.661 0 37.384 38.375 46 37 37 0 37 37 1 1 1 0 1 1 4551.2 2079 2566 2037 4829 5526 5526 1 ATNNSLER Unmodified 903.44101 0.44100836 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 4 0.816 1 1 1 27.587 27.587 2 0.0033763 5763 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.5 41.72 230.96 127.62 207.34 78.138 46.807 255.57 217 134 203 74 46 241 3 2 3 1 1 3 31600 2080 1641 2038 4830;4831;4832 5527;5528;5529 5528 3 ATNPFVNR Unmodified 917.47191 0.47191456 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 8 0 1 44.983 44.983 2 0.0088228 11556 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.027 60.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2081 2886 2039 4833 5530 5530 1 ATNPLNK Unmodified 756.413 0.41300269 2632 Q8R0H9;A0A2R8VI72 Gga1 ADP-ribosylation factor-binding protein GGA1 yes no 0 0 0 0 8 0 1 43.875 43.875 2 0.027043 11017 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.308 49.736 59.173 73.212 91.736 94.256 102.36 0 56 74 93 93 102 0 1 1 1 1 1 0 4131 2082 2632 2040 4834 5531 5531 1 ATNSSWVVVFK Deamidation (N) 1237.6343 0.63428844 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 1 0 0 8.5 0.5 1 1 79.8 79.8 3 0.00054515 27951 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.76 48.717 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 3984.1 2083 2129 2041 4835;4836 5532;5533 5532 823 2 ATNSSWVVVFK Unmodified 1236.6503 0.65027285 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 10.9 1.25 1 2 2 1 1 73.121 73.121 2;3 1.2489E-13 22026 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 153.12 100.54 284.57 161.26 366.34 253.53 161.55 253.17 267 167 364 250 161 240 4 3 5 4 2 3 150590 2084 2129 2041 4837;4838;4839;4840;4841;4842;4843 5534;5535;5536;5537;5538;5539;5540 5535 7 ATPAADGK Unmodified 729.36572 0.36571815 3227 Q9JKC6 Cend1 Cell cycle exit and neuronal differentiation protein 1 yes yes 0 0 0 0 8 3.56 1 1 1 33.261 33.261 2 0.0085649 8052 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.51 50.111 294.96 270.36 331.41 275.42 57.278 264.87 278 278 334 268 56 250 3 3 3 2 1 3 45652 2085 3227 2042 4844;4845;4846 5541;5542;5543 5543 3 ATPATEESTVPATQSSALPAAK Unmodified 2127.0695 0.069542713 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 4.5 0.5 2 2 53.875 53.875 3;4 3.3759E-18 18157 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.78 88.709 134.03 81.705 103.82 67.171 29.288 39.442 129 84 102 65 28 37 4 3 2 1 1 1 36973 2086 1986 2043 4847;4848;4849;4850 5544;5545;5546;5547 5545 4 ATPDEAADLER Unmodified 1186.5466 0.54659564 2444 Q8BQQ1 Zdhhc14 Probable palmitoyltransferase ZDHHC14 yes yes 0 0 0 0 1 0 1 43.716 43.716 2 4.9441E-05 12444 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.568 41.709 20.195 38.006 0 20.424 18.258 19.733 19 37 0 19 19 19 1 1 0 1 1 1 2434 2087 2444 2044 4851 5548 5548 1 ATPEASGSGEKVEGSEPSVTYYR Acetyl (Protein N-term) 2442.1187 0.11867775 2946 Q9CQX2 Cyb5b Cytochrome b5 type B yes yes 1 0 0 1 2.5 0.5 1 1 53.195 53.195 3 5.026E-15 17565 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.578 49.29 0 58.486 65.664 106.02 82.324 19.49 0 56 65 102 84 19 0 2 1 2 2 1 21284 2088 2946 2045 4852;4853 5549;5550 5549 2 ATPEPSGTPSSDTVSR Unmodified 1587.7376 0.73764389 1289 O89053 Coro1a Coronin-1A yes yes 0 0 0 0 5.5 4.39 1 1 1 1 37.419 37.419 2;3 9.443E-45 10880 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 172.21 147.33 109.45 96.56 35.921 0 162.65 76.183 102 93 37 0 158 74 2 2 1 0 3 2 89216 2089 1289 2046 4854;4855;4856;4857 5551;5552;5553;5554 5552 4 ATPEPSGTPSSDTVSRLEEDVR Unmodified 2329.1034 0.10336204 1289 O89053 Coro1a Coronin-1A yes yes 0 0 0 1 2 0 1 56.167 56.167 3 0.0024271 18997 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.711 27.29 20.346 8.2041 0 30.604 0 40.508 19 9 0 28 0 38 1 1 0 1 0 1 2237.5 2090 1289 2047 4858 5555 5555 1 ATPGNLGSSVLASK Acetyl (Protein N-term) 1342.7092 0.70924429 1244 O70172 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 1 0 0 0 9.5 3.5 1 1 68.732 68.732 2 0.00010921 24261 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.607 40.949 68.963 53.494 86.11 74.509 65.973 20.254 65 56 83 74 65 19 2 2 1 2 1 1 10924 2091 1244 2048 4859;4860 5556;5557 5556 2 ATPGPGR Unmodified 654.34492 0.34492313 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 6 0 1 23.334 23.334 2 0.025125 3561 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.386 43.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2092 1561 2049 4861 5558 5558 1 ATPLPAEGK Unmodified 882.48108 0.48108226 1250 Q80UE5;O70318;Q80UE4 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 8 3.56 1 1 1 45.666 45.666 2 0.00041953 13400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.24 76.202 127.74 34.809 250.29 173.77 195.57 221.48 120 37 241 176 199 213 2 1 3 3 2 3 24029 2093 1250 2050 4862;4863;4864 5559;5560;5561 5560 3 ATPRPTPVNSATAALPSK Unmodified 1777.9686 0.96864688 983 H3BK88;F6R3V4;H3BIX0;H3BL37;O08784 Tcof1 Treacle protein yes no 0 0 0 1 13 0 1 47.911 47.911 4 0.048982 15250 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 32.387 12.549 168.6 185.47 0 221.64 245.34 174.22 158 185 0 207 250 170 1 1 0 1 1 1 5456.7 2094 983 2051 4865 5562 5562 1 ATPTTAPGTSPR Unmodified 1155.5884 0.58840088 1034 F8VQE9;Q8VHH5;A0A0G2JER6 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 5 0 1 32.584 32.584 2 0.0010969 7561 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.607 38.518 0 0 0 20.614 8.1456 9.3616 0 0 0 19 9 9 0 0 0 1 1 1 1332.6 2095 1034 2052 4866 5563 5563 1 ATPYNYPVPVR Unmodified 1275.6612 0.66117189 2916 Q9CQ91 Ndufa3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 yes yes 0 0 0 0 7 0 1 53.922 53.922 2 1.4974E-08 16348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.15 81.049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2096 2916 2053 4867 5564 5564 1 ATPYNYPVPVRDDGNMPDVPSHPQDPLGPSLDWLK Unmodified 3886.8625 0.86247383 2916 Q9CQ91 Ndufa3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 yes yes 0 0 0 1 6 0 1 79.884 79.884 4 1.4758E-06 29433 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.438 37.921 0 0 20.558 0 9.414 0 0 0 19 0 9 0 0 0 1 0 1 0 1691.7 2097 2916 2054 4868 5565 5565 1 ATQALVLAPTR Unmodified 1139.6663 0.66625727 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 0 9 0 1 53.853 53.853 2 0.016616 14963 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.885 34.866 68.796 62.745 106.25 0 116.11 0 65 65 102 0 111 0 1 1 1 0 1 0 5792.8 2098 1679 2055 4869 5566 5566 1 ATQPSLTELTTLK Unmodified 1401.7715 0.7715102 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 7 0 1 69.677 69.677 3 0.00084717 23762 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.128 31.301 0 0 58.985 36.083 44.818 47.757 0 0 56 37 46 46 0 0 1 1 1 1 5392.5 2099 784 2056 4870 5567 5567 1 ATQQGLK Unmodified 744.413 0.41300269 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7.5 0.5 1 1 35.795 35.795 2 0.026992 7982 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.752 31.585 39.098 104.78 66.672 33.722 0 0 37 102 69 32 0 0 1 2 2 1 0 0 7771.6 2100 1412 2057 4871;4872 5568;5569 5568 2 ATSASSHLNK Acetyl (Protein N-term);Deamidation (N) 1057.504 0.50400254 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 1 1 0 0 3 0.816 1 1 1 36.394 36.394 2 3.6165E-05 10077 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.676 27.447 88.466 0 99.709 34.871 45.204 38.152 83 0 94 37 46 37 2 0 2 1 1 1 6797.5 2101 1383 2058 4873;4874;4875 5570;5571;5572 5572 450 3 ATSASSHLNK Acetyl (Protein N-term) 1056.52 0.51998696 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 1 0 0 0 5.11 1.52 1 3 2 1 1 1 35.067 35.067 2;3 2.6008E-129 8853 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.91 47.706 651.16 650.32 473.09 708.26 363.82 697.3 612 658 482 679 376 661 9 10 6 10 7 7 380900 2102 1383 2058 4876;4877;4878;4879;4880;4881;4882;4883;4884 5573;5574;5575;5576;5577;5578;5579;5580;5581;5582;5583;5584 5579 12 ATSDEVLQSDLSAHCIPK Unmodified 1969.9415 0.94150543 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 6 0 1 58.799 58.799 4 0.0047965 19585 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.202 21.879 0 37.938 85.517 45.181 0 0 0 37 83 46 0 0 0 1 1 1 0 0 2682.8 2103 2302 2059 4885 5585 5585 1 ATSIDPNTYITWIDK Unmodified 1736.8621 0.86211612 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7.5 0.5 1 1 82.85 82.85 3 0.00070194 30109 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.862 30.534 50.431 0 38.357 66.81 160.57 47.411 47 0 37 65 158 46 2 0 1 2 3 1 6256.2 2104 3204 2060 4886;4887 5586;5587;5588 5587 3 ATSISTQLPDDPAK Unmodified 1442.7253 0.72528829 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 5 0 1 56.411 56.411 3 2.4581E-05 19031 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.911 45.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2105 2520 2061 4888 5589 5589 1 ATSNVFAMFDQSQIQEFK Unmodified 2089.9779 0.97789093 1923 Q3THE2;Q6ZWQ9;D3YV37;Q9CQ19;D3Z249 Myl12b;Myl12a;Myl9 Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 7.67 0.471 1 2 86.59 86.59 3;4 8.9906E-09 31792 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.67 88.302 20.244 117.33 48.731 28.569 37.804 38.904 19 112 47 28 38 37 1 3 2 2 2 2 13737 2106 1923 2062 4889;4890;4891 5590;5591;5592;5593;5594 5590 5 ATSPQRPK Unmodified 883.48756 0.48756462 3051 Q9D2P8 Mobp Myelin-associated oligodendrocyte basic protein yes yes 0 0 0 1 10 2.16 1 1 1 26.257 26.257 3 0.012276 4812 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.324 51.809 85.144 55.012 98.234 45.003 255.26 214.73 80 53 93 43 250 207 2 2 2 2 2 2 20824 2107 3051 2063 4892;4893;4894 5595;5596;5597 5597 3 ATSPSTLVSTGPSSR Unmodified 1446.7314 0.7314363 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 6.5 0.5 1 1 45.159 45.159 2 4.0921E-16 13098 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.54 86.974 9.657 0 0 20.767 28.62 19.437 9 0 0 19 28 19 1 0 0 1 1 1 6073.9 2108 1464;860 2064 4895;4896 5598;5599 5598 2 ATSQPPNSSEAGR Unmodified 1300.6008 0.60075648 336 F8WJB9;E9PVP4;A0A1Y7VJA2;P70429 Evl Ena/VASP-like protein yes no 0 0 0 0 4 0 1 26.627 26.627 2 3.4275E-06 5370 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.706 49.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2109 336 2065 4897 5600 5600 1 ATSVALTWSR Unmodified 1090.5771 0.57710791 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 10.7 1.7 1 1 1 56.869 56.869 2;3 4.0899E-05 19532 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.67 81.828 344.39 225.11 356.78 259.73 335.18 328.36 324 239 353 266 341 317 1 1 1 2 1 1 37724 2110 1362 2066 4898;4899;4900 5601;5602;5603 5603 3 ATSVPGPTQATAPPEVGR Unmodified 1734.8901 0.89006221 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4 0 1 49.113 49.113 3 0.0057783 15950 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.968 26.177 0 48.944 0 0 0 39.442 0 46 0 0 0 37 0 1 0 0 0 1 3947.3 2111 1275 2067 4901 5604 5604 1 ATTADGSSILDR Unmodified 1205.5888 0.58879481 1270 O88544;F6QTS1 Cops4 COP9 signalosome complex subunit 4 yes no 0 0 0 0 4.5 0.5 1 1 46.435 46.435 2 4.6635E-20 14657 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.54 114.25 0 82.103 53.193 59.847 109.22 120.54 0 78 51 56 111 116 0 2 1 1 2 2 26980 2112 1270 2068 4902;4903 5605;5606 5605 2 ATTAELFEEPFVADEYIER Acetyl (Protein N-term) 2271.0583 0.058309325 863 E9PZ92;Q3TPX4 Exoc5 Exocyst complex component 5 yes no 1 0 0 0 2 0.816 1 1 1 98.671 98.671 3 1.7588E-08 29949 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.372 43.06 0 3.109 4.9654 8.3192 6.8503 4.0685 0 3 5 8 7 4 0 2 1 2 1 1 3267.7 2113 863 2069 4904;4905;4906 5607;5608;5609 5608 3 ATTDGGDGTSSEQIR Unmodified 1493.6594 0.65939357 1891 Q07409 Cntn3 Contactin-3 yes yes 0 0 0 0 1 0 1 32.904 32.904 3 0.00053381 8073 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.357 42.121 20.268 0 20.071 8.6408 0 0 19 0 19 9 0 0 1 0 1 1 0 0 2126.3 2114 1891 2070 4907 5610 5610 1 ATTDNSPSSK Unmodified 1006.4567 0.456718 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 9.5 3.5 1 1 29.938 29.938 2;3 0.0038053 6581 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.974 37.865 54.495 0 38.361 70.778 125.06 71.051 51 0 37 69 125 70 1 0 1 2 2 2 4185.4 2115 1318 2071 4908;4909 5611;5612 5612 2 ATTHEVMGPK Unmodified 1069.5226 0.5226295 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 7.75 3.11 1 1 1 1 35.906 35.906 3 0.0011605 8859 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.162 43.592 298.83 363.16 301.88 598.14 307.5 494.38 281 365 306 569 319 472 1 3 1 3 1 3 38822 2116 2129 2072 4910;4911;4912;4913 5613;5614;5615;5616 5614 4 ATTLSNAVSSLASTGLSLTK Unmodified 1921.0368 0.036786022 2280 Q7M6Y3;A0A1L1SUR7;A0A140LHQ8 Picalm Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 0 6 5 1 1 87.751 87.751 3 1.1767E-10 27915 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.326 68.961 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17276 2117 2280 2073 4914;4915 5617;5618 5618 2 ATTPQLTDVSEDLDQQSLPSEPEEALNR Unmodified 3082.4578 0.4578468 2202 Q6NS82;A0A087WPR9 Fam134a Protein FAM134A yes no 0 0 0 0 2 0 1 73.705 73.705 4 0.0016357 26764 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 35.216 28.417 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 918.11 2118 2202 2074 4916 5619 5619 1 ATVAAFAASEGHSHPR Unmodified 1607.7805 0.78045218 1284;2571 O88952;Q8JZS0 Lin7c;Lin7a Protein lin-7 homolog C;Protein lin-7 homolog A no no 0 0 0 0 12 0 1 38.972 38.972 4 0.00099854 6077 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.265 39.289 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1209 2119 1284;2571 2075 4917 5620 5620 1 ATVAATTK Acetyl (Protein N-term) 803.43888 0.43888309 3320 Q9WTM5;A0A1B0GSR4;A0A1B0GRW3 Ruvbl2 RuvB-like 2 yes no 1 0 0 0 4.5 0.5 1 1 43.441 43.441 2 0.0089952 12788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.002 30.531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2120 3320 2076 4918;4919 5621;5622 5622 2 ATVAEWK Unmodified 803.41775 0.41775372 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.5 3.5 1 1 52.764 52.764 2 0.027736 17425 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.798 38.817 237.29 180.84 0 209.28 204.93 240.4 222 185 0 195 213 231 2 2 0 2 2 2 22718 2121 2186 2077 4920;4921 5623;5624 5624 2 ATVDLEK Acetyl (Protein N-term) 816.4229 0.42289868 1357 P12382;A0A1W2P6Q4 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes no 1 0 0 0 3 0.816 1 1 1 57.232 57.232 2 0.007429 19856 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.682 66.682 157.18 167.36 190.94 182.57 69.817 116.33 148 167 194 176 74 111 3 3 4 3 2 2 72413 2122 1357 2078 4922;4923;4924 5625;5626;5627;5628 5626 4 ATVEDEK Unmodified 790.37086 0.37086311 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 5.14 3.44 1 2 1 1 1 1 36.689 36.689 2;3 0.0059648 10659 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 139.68 42.612 382.64 616.47 298.22 723.16 882.97 633.92 360 607 314 691 891 615 5 6 5 7 5 6 292210 2123 1762 2079 4925;4926;4927;4928;4929;4930;4931 5629;5630;5631;5632;5633;5634;5635;5636;5637 5631 9 ATVELHEDKK Unmodified 1168.6088 0.60880197 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 1 6 0 1 39.706 39.706 4 0.036618 10459 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.164 24.91 68.974 63.24 75.926 0 94.662 76.183 65 65 74 0 93 74 1 1 1 0 1 1 5871.1 2124 2806 2080 4932 5638 5638 1 ATVNLLGDEK Unmodified 1058.5608 0.56078914 1073 G3X8R0 Reep5 Receptor expression-enhancing protein yes yes 0 0 0 0 13 0 1 58.828 58.828 2 0.0047197 20563 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.387 18.122 99.125 131.64 0 99.251 127.48 114.69 93 130 0 93 130 111 1 1 0 1 1 1 10939 2125 1073 2081 4933 5639 5639 1 ATVNQDTR Unmodified 903.44101 0.44100836 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4 0.816 1 1 1 25.484 25.484 2 0.0087098 4489 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.741 51.02 20.076 57.754 28.517 0 55.534 97.553 19 56 28 0 55 93 1 2 1 0 1 2 12904 2126 2803 2082 4934;4935;4936 5640;5641;5642 5642 3 ATVQPLPQAAGPSNQPGLLPSVSQPK Unmodified 2581.3864 0.3864006 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 68.823 68.823 4 1.8065E-07 22760 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.475 45.085 137.78 135.73 172.23 74.705 55.956 108.73 130 139 166 74 55 102 3 3 2 2 1 2 24063 2127 1983 2083 4937;4938;4939 5643;5644;5645 5644 3 ATVTPSPVK Unmodified 898.51238 0.51238239 31 A0A087WRY3;Q80XU3 Nucks1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 0 0 10.5 2.5 1 1 44.18 44.18 2 0.00043201 11289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.98 85.936 99.789 69.16 0 89.213 80.089 145.89 93 65 0 83 83 139 1 1 0 1 1 2 10473 2128 31 2084 4940;4941 5646;5647 5646 2 ATVVESSEK Unmodified 948.47639 0.47639081 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 6.33 3.25 1 1 1 1 1 1 40.487 40.487 2 4.4946E-08 11357 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.32 99.754 1251 705.5 1222.7 1022.3 929.04 698.79 1176 735 1211 1003 946 668 8 6 6 7 6 4 364400 2129 1706 2085 4942;4943;4944;4945;4946;4947 5648;5649;5650;5651;5652;5653;5654;5655;5656 5655 9 ATVVVEATEPEPSGSIGNPAASTSPSLSHR Acetyl (Protein N-term) 2989.4629 0.4628726 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 1 0 0 0 2.5 0.5 1 1 66.147 66.147 3 2.0621E-26 23663 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.683 43.579 9.5583 29.147 0 0 9.414 0 9 28 0 0 9 0 1 2 0 0 1 0 28091 2130 1382 2086 4948;4949 5657;5658;5659 5657 3 ATVWDEAEQDGIGEEVLK Acetyl (Protein N-term) 2029.948 0.94803059 14 A0A087WPH7 Psmc3 yes yes 1 0 0 0 1.5 0.5 1 1 89.893 89.893 3 1.7012E-19 29393 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.248 55.519 0 0 11.599 36.777 41.848 11.478 0 0 11 35 42 11 0 0 1 2 2 1 7292.1 2131 14 2087 4950;4951 5660;5661 5661 2 ATYFGSIVLLSPTVINSPLK Unmodified 2119.1929 0.19289273 428 A2A5K2;P55065 Pltp Phospholipid transfer protein yes no 0 0 0 0 12 0 1 94.914 94.914 3 1.3394E-08 27232 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.564 50.397 0 14.661 14.066 4.5322 5.0218 0 0 14 14 5 5 0 0 1 1 1 1 0 865.95 2132 428 2088 4952 5662 5662 1 AVAAGNSCR Unmodified 904.4185 0.41849878 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 6 0.816 1 1 1 24.142 24.142 2 0.0015032 3973 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.33 80.628 29.781 55.288 9.5561 9.4869 28.028 23.987 28 54 9 9 28 23 2 3 1 1 2 1 3254 2133 287;1450 2089 4953;4954;4955 5663;5664;5665 5663 3 AVAALLTIPEAEK Unmodified 1324.7602 0.76021723 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 10 1.87 1 1 1 1 77.691 77.691 2;3 1.3741E-18 27012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 149.33 105.82 108.24 119.75 229.33 100.5 131.66 125.23 102 121 222 102 130 121 2 2 3 3 2 3 28003 2134 2264 2090 4956;4957;4958;4959 5666;5667;5668;5669 5666 4 AVAAYLR Unmodified 762.43882 0.43882351 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 8 0 1 48.675 48.675 2 0.050747 13244 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.347 8.587 0 77.801 55.924 0 0 0 0 74 56 0 0 0 0 1 1 0 0 0 6001.6 2135 2543 2091 4960 5670 5670 1 AVADALETGEEDAVTEALR Unmodified 1958.9433 0.94327957 1926 Q3TIR3;A0A1B0GS30 Ric8a Synembryn-A yes no 0 0 0 0 3 0 1 79.929 79.929 3 1.603E-08 30170 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.511 61.549 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 3277.4 2136 1926 2092 4961 5671 5671 1 AVADALNR Unmodified 828.44537 0.44536545 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 9.5 3.5 1 1 41.806 41.806 2 0.013657 11684 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.833 30.807 306.44 103.35 165.91 300.35 183.33 364.67 287 111 167 287 187 347 2 1 1 2 1 2 40484 2137 2295 2093 4962;4963 5672;5673 5672 2 AVAFHPSGSLYAVGSNSK Unmodified 1790.8951 0.89514758 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 9 0 1 55.886 55.886 4 7.0687E-05 15914 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.83 47.309 0 97.042 114.28 0 0 0 0 93 111 0 0 0 0 1 1 0 0 0 4421.3 2138 2537 2094 4964 5674 5674 1 AVAFLQRPR Unmodified 1056.6192 0.61924749 2183 Q64737 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 1 11 0 1 46.424 46.424 3 0.041131 10146 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.014 11.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2139 2183 2095 4965 5675 5675 1 AVAFQNSQTR Deamidation (N) 1121.5465 0.54653606 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 1 0 0 6 0.816 1 1 1 41.867 41.867 2 1.7134E-14 11533 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 177.3 136.53 34.017 85.635 86.599 74.249 78.234 28.807 32 84 88 74 79 28 1 2 2 2 2 1 11851 2140 3117 2096 4966;4967;4968 5676;5677;5678 5677 1082 3 AVAFQNSQTR Unmodified 1120.5625 0.56252048 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 0 8.8 2.23 2 1 1 1 38.707 38.707 2;3 1.9986E-28 8307 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 191.1 132.39 367.89 395.04 471.63 378.06 276.22 476.08 347 402 473 370 285 454 4 6 6 5 3 5 110140 2141 3117 2096 4969;4970;4971;4972;4973 5679;5680;5681;5682;5683;5684;5685 5684 7 AVAGDASESALLK Unmodified 1230.6456 0.6455814 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 8.8 3.49 1 1 1 2 56.948 56.948 2;3 2.3018E-73 19573 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 223.14 145.76 293.21 351.65 376.62 268.46 432.98 465.21 277 355 380 262 441 448 3 3 3 1 3 3 65732 2142 2699 2097 4974;4975;4976;4977;4978 5686;5687;5688;5689;5690 5689 5 AVAGVMITASHNR Unmodified 1325.6874 0.68740341 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 6.5 5.5 1 1 44.683 44.683 3 0.0012887 8245 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.731 45.169 0 48.486 60.736 28.616 0 54.366 0 46 60 28 0 51 0 1 2 1 0 2 3669.7 2143 2513 2098 4979;4980 5691;5692 5692 2 AVAHGDGDTQR Unmodified 1125.5163 0.51629857 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 5 4.05 1 2 1 1 19.345 19.345 3 1.2377E-08 2794 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.99 83.265 34.079 22.297 34.098 32.332 25.966 64.515 32 23 34 31 26 62 3 2 3 2 3 4 14198 2144 1412 2099 4981;4982;4983;4984;4985 5693;5694;5695;5696;5697 5694 5 AVAHILGIR Unmodified 948.58688 0.58688473 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 8 4.97 1 1 1 52.778 52.778 3 0.00035042 12590 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.009 47.306 0 262.73 259.5 38.848 274.27 66.066 0 251 256 38 264 65 0 4 4 2 3 2 98692 2145 1412 2100 4986;4987;4988 5698;5699;5700;5701;5702 5701 5 AVAIETQPAQGESDAVAR Unmodified 1811.9014 0.90135517 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 5.5 4.39 1 1 1 1 48.971 48.971 3 1.4254E-35 15794 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.73 113.84 188.02 203.92 27.245 157.81 181.88 263.47 176 204 28 149 185 250 2 4 1 4 2 3 82232 2146 2295 2101 4989;4990;4991;4992 5703;5704;5705;5706 5705 4 AVANAAAMLVLK Unmodified 1170.6795 0.67946449 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 11.5 0.5 1 1 76.771 76.771 2;3 1.4104E-11 20559 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.31 87.986 0 29.337 96.427 54.755 37.518 39.442 0 28 93 56 37 37 0 1 2 2 1 1 7370.9 2147 287 2102 4993;4994 5707;5708 5708 2 AVANETGAFFFLINGPEIMSK Unmodified 2255.1296 0.12964055 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9 0.816 1 1 1 98.519 98.519 3;4 0.0001796 35325 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.559 33.793 0 0 0 9.4903 18.431 29.322 0 0 0 9 19 28 0 0 0 1 1 1 3965.2 2148 1875 2103 4995;4996;4997 5709;5710;5711 5709 3 AVANQTSATFLR Unmodified 1277.6728 0.67279921 1712 P62192 Psmc1 26S protease regulatory subunit 4 yes yes 0 0 0 0 7 0 1 51.272 51.272 2 4.9415E-09 15114 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.62 74.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2149 1712 2104 4998 5712 5712 1 AVANYDSVEAGEK Unmodified 1351.6256 0.62557424 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 5 0 1 49.713 49.713 3 0.00046419 15830 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.275 38.372 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3050.8 2150 1602 2105 4999 5713 5713 1 AVAPGVVPAPCASK Unmodified 1322.7017 0.70165649 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 0 8 0 1 54.595 54.595 3 0.0012433 16003 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.32 39.575 78.565 81.822 71.349 76.63 0 78.884 74 83 74 74 0 74 1 1 1 1 0 1 3696.2 2151 1896 2106 5000 5714 5714 1 AVAQGNLSSADVQAAK Unmodified 1528.7845 0.7845345 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 50.075 50.075 3 1.3439E-24 15423 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.39 98.322 403.3 521.74 781.51 488.24 679.36 680.69 379 520 763 501 688 654 3 4 4 5 4 4 154990 2152 3117 2107 5001;5002;5003;5004 5715;5716;5717;5718;5719 5716 5 AVAQGNLSSADVQAAK Deamidation (N) 1529.7686 0.76855009 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 1 0 0 5 0 1 54.88 54.88 3 0.00097216 18309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.377 41.537 39.335 16.772 47.36 27.108 35.808 48.014 37 19 46 28 37 46 1 1 1 1 1 1 1748.7 2153 3117 2107 5005 5720 5720 1083 1 AVASEEETPAK Unmodified 1130.5455 0.54553301 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 3.5 0.5 1 1 40.424 40.424 3 2.109E-05 11691 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.456 73.113 69.032 90.709 151.02 74.751 61.212 97.391 65 92 148 74 65 93 1 2 2 1 1 1 27903 2154 1415 2108 5006;5007 5721;5722 5722 2 AVATPAAAAAEEER Unmodified 1355.6681 0.66810776 3369 Q9Z127 Slc7a5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 0 3.5 0.5 2 2 43.411 43.411 2;3 1.0072E-10 13556 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.01 92.305 58.763 58.65 17.918 69.62 18.986 69.29 55 56 19 65 19 65 2 2 1 2 1 2 13097 2155 3369 2109 5008;5009;5010;5011 5723;5724;5725;5726 5724 4 AVATPAK Unmodified 656.38573 0.38572531 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 10.5 2.5 1 1 38.005 38.005 2 0.033339 8340 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.614 22.653 39.356 86.771 150.08 128.79 173.59 133.63 37 83 149 129 176 130 1 1 2 2 2 2 9700.8 2156 1333 2110 5012;5013 5727;5728 5727 2 AVATQGAFNSWDWVTR Unmodified 1807.8642 0.86418181 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 8 0 1 76.431 76.431 3 2.183E-17 26344 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.02 113.9 0 0 0 39.056 73.632 57.595 0 0 0 37 74 56 0 0 0 1 1 1 8328.6 2157 1226 2111 5014 5729 5729 1 AVAVGRPSNEELR Acetyl (Protein N-term) 1438.7528 0.75284044 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept11 Septin-11 yes no 1 0 0 1 2 1 1 1 42.683 42.683 2 4.6982E-18 13226 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.417 12.592 6.3231 32.174 22.924 0 0 29.848 6 31 23 0 0 28 1 2 2 0 0 1 60807 2158 112 2112 5015;5016 5730;5731 5731 2 AVAVVVDPIQSVK Unmodified 1323.7762 0.77620165 1199 O35593 Psmd14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 0 7.5 0.5 1 1 70.209 70.209 3 3.2191E-05 23399 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.5 76.264 0 98.342 36.496 61.208 67.99 0 0 93 37 56 65 0 0 2 1 1 1 0 10407 2159 1199 2113 5017;5018 5732;5733 5733 2 AVCMLSNTTAIAEAWAR Unmodified 1863.8971 0.89713819 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 9.42 4.13 7 1 2 9 4 2 2 16 90.395 90.395 2;3 7.8831E-74 26088 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 170.95 111.65 999.34 698.76 668.41 772.75 876.85 1123 936 703 652 737 881 1072 24 20 17 20 22 23 1327600 2160 44;1313;1794;3223 2114 5019;5020;5021;5022;5023;5024;5025;5026;5027;5028;5029;5030;5031;5032;5033;5034;5035;5036;5037;5038;5039;5040;5041;5042;5043;5044;5045;5046;5047;5048;5049;5050;5051;5052;5053;5054;5055;5056;5057;5058;5059;5060;5061 5734;5735;5736;5737;5738;5739;5740;5741;5742;5743;5744;5745;5746;5747;5748;5749;5750;5751;5752;5753;5754;5755;5756;5757;5758;5759;5760;5761;5762;5763;5764;5765;5766;5767;5768;5769;5770;5771;5772;5773;5774;5775;5776;5777;5778;5779;5780;5781;5782;5783;5784;5785;5786;5787;5788;5789;5790;5791 5765 58 AVCMLSNTTAIAEAWAR Deamidation (N) 1864.8812 0.88115378 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 0 10 2.54 2 2 1 1 3 85.293 85.293 2;3;4 1.5742E-26 30941 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.28 114.21 59.739 39.368 58.676 127.42 117.47 87.762 56 37 56 121 120 84 1 1 1 3 5 3 22066 2161 44;1313;1794;3223 2114 5062;5063;5064;5065;5066;5067;5068;5069;5070 5792;5793;5794;5795;5796;5797;5798;5799;5800;5801 5792 6 10 AVCMLSNTTAIAEAWAR Oxidation (M) 1879.8921 0.89205282 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 1 0 10 1.49 1 3 3 1 1 78.153 78.153 3 6.8408E-05 24914 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.601 49.166 187.04 269.86 264.21 221.08 399.55 405.91 175 268 260 213 399 390 4 7 6 4 6 8 31249 2162 44;1313;1794;3223 2114 5071;5072;5073;5074;5075;5076;5077;5078;5079 5802;5803;5804;5805;5806;5807;5808;5809;5810;5811;5812;5813;5814 5811 1 13 AVCMLSNTTAIAEAWAR Oxidation (M);Deamidation (N) 1880.8761 0.8760684 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 1 0 10 0 1 79.14 79.14 3 0.0028433 24638 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.208 32.103 29.481 46.026 55.636 45.924 55.166 37.868 28 46 56 46 56 37 1 1 1 1 1 1 5025.6 2163 44;1313;1794;3223 2114 5080 5815 5815 6 1 1 AVDDGVNTFK Unmodified 1064.5138 0.51383895 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8 3.56 1 1 1 53.261 53.261 2 1.4291E-05 16989 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.009 25.415 165.89 241.43 227.51 183.89 253.05 0 157 241 232 185 250 0 2 2 2 2 2 0 23921 2164 1543 2115 5081;5082;5083 5816;5817;5818 5817 3 AVDEAADALLK Unmodified 1114.587 0.58700389 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 5 0.816 1 1 1 67.525 67.525 2;3 4.9539E-13 24276 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 148.32 81.629 89.142 69.43 107.53 57.247 90.07 41.935 84 71 106 56 90 40 3 2 3 2 3 1 13945 2165 2517 2116 5084;5085;5086 5819;5820;5821;5822 5819 4 AVDEDLENQTLR Unmodified 1401.6736 0.67358707 1799 P70188 Kifap3 Kinesin-associated protein 3 yes yes 0 0 0 0 1.67 0.471 1 2 51.928 51.928 2;3 0.0080045 17048 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 49.025 19.954 0 40.108 19.365 0 46.807 38.106 0 38 19 0 46 37 0 2 1 0 1 1 7300.2 2166 1799 2117 5087;5088;5089 5823;5824;5825 5825 3 AVDFAER Unmodified 806.39227 0.39226725 1757 P62918 Rpl8 60S ribosomal protein L8 yes yes 0 0 0 0 4 0 1 44.673 44.673 2 0.036372 13698 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.191 48.219 59.76 65.13 0 0 58.576 0 56 65 0 0 56 0 1 1 0 0 1 0 6142.6 2167 1757 2118 5090 5826 5826 1 AVDFQEAQSYADDNSLLFMETSAK Unmodified 2679.201 0.20102717 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 0 0 0 5 0 1 85.761 85.761 4 6.464E-05 32686 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.641 34.769 30.044 0 0 20.239 28.056 8.7934 28 0 0 19 28 9 1 0 0 1 1 1 1935.2 2168 2921 2119 5091 5827 5827 1 AVDHATNR Unmodified 882.43078 0.43077802 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 4 0 1 17.845 17.845 3 0.0097917 2480 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.673 23.575 0 0 0 7.651 0 11.726 0 0 0 7 0 11 0 0 0 1 0 1 943.33 2169 577 2120 5092 5828 5828 1 AVDHINSR Unmodified 910.46208 0.46207815 1399 P17183;D3Z6E4;D3Z2S4;D3YVD3 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 7.14 2.9 1 2 1 1 1 1 25.536 25.536 2;3 0.0012473 4490 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 144.12 81.404 670.14 710.52 760.56 807.68 789.22 811.09 632 720 780 785 815 781 6 5 6 3 4 4 140260 2170 1399 2121 5093;5094;5095;5096;5097;5098;5099 5829;5830;5831;5832;5833;5834;5835 5830 7 AVDHVQR Unmodified 823.43005 0.43004974 1981 Q3UHG5;Q62283 Tspan7 Tetraspanin;Tetraspanin-7 yes no 0 0 0 0 6.25 3.96 1 1 1 1 21.933 21.933 3 0.0018745 3736 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.99 56.996 118.14 121.12 282.8 203.18 212.02 104.28 111 120 277 204 213 102 2 2 3 3 3 2 78806 2171 1981 2122 5100;5101;5102;5103 5836;5837;5838;5839 5836 4 AVDIDGER Unmodified 873.41921 0.41921028 1216 O35963 Rab33b Ras-related protein Rab-33B yes yes 0 0 0 0 2 0 1 40.389 40.389 2 0.025124 11994 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.213 33.56 39.465 26.847 16.992 39.428 0 0 37 28 19 37 0 0 1 1 1 1 0 0 4746.8 2172 1216 2123 5104 5840 5840 1 AVDLIPWMEYEFR Unmodified 1667.8018 0.80176447 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 8 2.61 2 1 1 1 95.327 95.327 2;3 0.0020266 38250 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.314 34.013 44.819 61.93 37.75 34.825 36.03 49.279 42 61 38 32 37 47 2 3 2 3 2 3 22255 2173 1362 2124 5105;5106;5107;5108;5109 5841;5842;5843;5844;5845;5846;5847 5847 7 AVDLLYAMCDR Unmodified 1325.6108 0.61079258 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 7.5 0.5 1 1 75.503 75.503 2 0.00086598 25859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.827 67.507 24.36 0 133.76 30.64 107.19 66.231 23 0 125 32 106 65 1 0 2 1 2 2 12338 2174 1401 2125 5110;5111 5848;5849 5849 2 AVDNQVYVATASPAR Unmodified 1560.7896 0.78961988 3206 Q9JHW2;A0A338P7A1;A0A338P6G0 Nit2 Omega-amidase NIT2 yes no 0 0 0 0 5 0 1 48.849 48.849 3 0.00016816 15424 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.413 50.546 29.812 0 39.062 18.439 0 39.442 28 0 37 19 0 37 1 0 1 1 0 1 2898.5 2175 3206 2126 5112 5850 5850 1 AVDPDSPAEASGLR Unmodified 1383.663 0.66302238 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 47.615 47.615 2 5.5283E-31 15119 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 165.78 127.68 29.904 67.415 87.454 23.704 46.911 112.72 28 66 84 23 47 107 1 3 3 1 2 4 32883 2176 1815 2127 5113;5114;5115;5116 5851;5852;5853;5854 5851 4 AVDSLVPIGR Unmodified 1025.5869 0.58694431 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 9.17 2.54 1 1 1 1 1 1 61.169 61.169 2 1.4303E-48 20658 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 208.72 134 1925.1 926.13 1253.3 1124.2 2152.2 2194.2 1805 952 1216 1108 2179 2116 9 6 6 7 10 10 889200 2177 1881 2128 5117;5118;5119;5120;5121;5122 5855;5856;5857;5858;5859;5860;5861;5862;5863;5864;5865 5855 11 AVDVFFPPEAQNDFPVAMQISEK Unmodified 2578.2414 0.24137584 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.75 3.11 1 1 1 1 92.209 92.209 3;4 2.215E-05 34909 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.645 38.716 50.247 31.42 38.723 39.92 9.0934 67.965 47 33 37 37 9 64 2 3 3 2 1 3 10962 2178 2185 2129 5123;5124;5125;5126 5866;5867;5868;5869 5867 4 AVEAFETAK Unmodified 964.48656 0.48656157 2176 Q64442 Sord Sorbitol dehydrogenase yes yes 0 0 0 0 5.33 0.471 2 1 54.66 54.66 2;3 0.001739 18260 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.827 46.572 49.008 25.869 36.97 68.842 76.454 116.14 46 28 37 65 74 111 1 1 1 2 1 3 7227.9 2179 2176 2130 5127;5128;5129 5870;5871;5872 5871 3 AVECPPPR Unmodified 924.44874 0.44873627 2872 Q99MN1;Q8R2P8 Kars Lysine--tRNA ligase yes no 0 0 0 0 4 0 1 32.229 32.229 2 0.016447 7868 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.784 54.822 39.701 0 0 0 0 9.594 37 0 0 0 0 9 1 0 0 0 0 1 1900.5 2180 2872 2131 5130 5873 5873 1 AVEDIHGLFSLSK Unmodified 1414.7456 0.7456298 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 7 0 1 71.769 71.769 3 0.0096095 24736 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.79 24.159 48.659 74.548 54.271 35.989 64.716 47.189 46 74 56 37 65 46 1 1 1 1 1 1 2483.1 2181 1438 2132 5131 5874 5874 1 AVEEPLNAFK Unmodified 1116.5815 0.58152458 398;400 A0A2R8VK70;A0A2R8W6P0 no no 0 0 0 0 8 3.56 1 1 1 63.509 63.509 2;3 7.6688E-06 22506 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.01 59.463 162.49 95.615 200.84 177.86 134.87 159.25 153 98 199 176 139 153 3 2 3 3 2 3 25569 2182 398;400 2133 5132;5133;5134 5875;5876;5877 5875 3 AVEEVITISK Unmodified 1087.6125 0.61249036 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 7.75 3.11 1 1 1 1 64.898 64.898 2;3 1.8836E-15 22362 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 175.73 115.14 513.2 304.31 411.66 200.98 203.71 419.52 482 325 408 195 203 399 4 4 4 2 2 3 52990 2183 154 2134 5135;5136;5137;5138 5878;5879;5880;5881 5879 4 AVEEVTVEK Unmodified 1002.5233 0.523341 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 4 0 1 50.603 50.603 3 0.01653 16562 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.608 28.669 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2184 640 2135 5139 5882 5882 1 AVEFQEAQAYADDNSLLFMETSAK Unmodified 2677.2218 0.22176261 1514 P35278 Rab5c Ras-related protein Rab-5C yes yes 0 0 0 0 9 4 1 1 85.901 85.901 4 0.055331 33662 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 24.514 5.7951 29.753 37 48.85 17.338 27.493 29.063 28 37 46 19 28 28 1 1 1 1 1 1 6255.3 2185 1514 2136 5140;5141 5883;5884 5884 2 AVEILADIIQNSTLGEAEIER Unmodified 2283.1958 0.19580586 2988 Q9CXT8 Pmpcb Mitochondrial-processing peptidase subunit beta yes yes 0 0 0 0 7 0 1 104.93 104.93 3 0.00686 37292 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.169 27.511 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 783.13 2186 2988 2137 5142 5885 5885 1 AVELAANTK Unmodified 915.50255 0.50254598 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 6 0 1 48.415 48.415 2 3.2194E-05 14563 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 139.98 75.412 147.79 86.408 154.21 0 180.95 152.6 139 93 148 0 178 148 1 1 1 0 1 1 16366 2187 1537 2138 5143 5886 5886 1 AVELNMISLK Unmodified 1116.6213 0.62128091 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 9 0 1 73.68 73.68 3 0.0012402 24318 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.067 44.668 0 0 29.057 27.819 55.998 37.844 0 0 28 28 56 37 0 0 1 1 1 1 5599.3 2188 2840 2139 5144 5887 5887 1 AVELNPK Unmodified 769.4334 0.43340378 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 8.67 3.09 1 1 1 48.028 48.028 2 0.026876 15009 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.784 33.877 59.319 54.19 83.38 64.548 81.223 76.566 56 56 83 65 83 74 1 1 1 1 1 1 6616.4 2189 3012 2140 5145;5146;5147 5888;5889;5890 5890 3 AVELYIQGK Unmodified 1019.5651 0.56514624 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 8 0 1 62.685 62.685 2 0.0056749 19931 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.75 38.981 69.264 54.333 34.716 38.372 0 0 65 56 37 37 0 0 1 1 1 1 0 0 4792 2190 882 2141 5148 5891 5891 1 AVENELLDR Unmodified 1057.5404 0.54038805 1604 Q3UEE2;P51855;A2AQN7 Gss Glutathione synthetase yes no 0 0 0 0 3 0 1 52.577 52.577 2 0.004873 17835 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.377 36.59 48.903 32.054 49.324 34.222 0 49.036 46 34 49 34 0 46 1 1 1 1 0 1 7207.5 2191 1604 2142 5149 5892 5892 1 AVENLIPPVQHSLLDQK Unmodified 1900.0418 0.04181182 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 7.5 0.5 1 1 70.454 70.454 3 5.2423E-05 24179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.153 48.558 123.68 48.561 92.066 88.471 118.35 90.431 116 51 92 88 120 88 2 1 2 2 2 2 11956 2192 2790 2143 5150;5151 5893;5894 5893 2 AVENSSTAIGIR Unmodified 1216.6412 0.64116473 1253 O70435 Psma3 Proteasome subunit alpha type-3 yes yes 0 0 0 0 5 0.816 1 1 1 46.034 46.034 2 5.0246E-23 13503 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 168.85 116.85 0 0 0 42 0 0 0 0 0 42 0 0 0 0 0 1 0 0 16832 2193 1253 2144 5152;5153;5154 5895;5896;5897 5897 3 AVETTAQSDNK Unmodified 1162.5466 0.54659564 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 35.641 35.641 2;3 1.4578E-13 9117 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.46 107.15 78.363 314.99 609.69 677.35 814.78 725.08 74 305 604 663 829 702 2 5 6 6 5 7 152450 2194 1596 2145 5155;5156;5157;5158;5159 5898;5899;5900;5901;5902;5903;5904;5905 5905 8 AVEVAWETLQEEFSR Unmodified 1792.8632 0.86317875 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 8 3.56 1 1 1 93.91 93.91 3 3.229E-11 35153 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.36 88.697 17.956 80.147 38.613 44.785 53.464 38.184 17 76 37 44 53 36 2 2 2 3 2 2 12940 2195 1653 2146 5160;5161;5162 5906;5907;5908 5906 3 AVEYLLELNNIIESQQQLLETQR Unmodified 2743.4392 0.43922403 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 11 2 1 1 107.47 107.47 3;4 0.0010131 37216 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.911 29.608 9.657 5.32 0 9.837 0 29.848 9 5 0 9 0 28 1 1 0 1 0 2 1065.5 2196 553 2147 5163;5164 5909;5910 5909 2 AVEYLLMGIPGDR Unmodified 1432.7384 0.73843593 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 8.5 0.5 1 1 83.588 83.588 3 9.3909E-09 29797 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.087 65.889 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 2142.1 2197 1621 2148 5165;5166 5911;5912 5911 2 AVEYLTLSSVASTDVLATVLEEMPPFPER Unmodified 3163.5999 0.59988335 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 13 0 1 118.93 118.93 4 6.8148E-05 45247 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.973 36.61 3.219 0 0 0 0 6.396 3 0 0 0 0 6 1 0 0 0 0 1 1067.7 2198 1400 2149 5167 5913 5913 1 AVEYNALFK Unmodified 1053.5495 0.54949617 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 7 0 1 66.412 66.412 2 0.020442 22260 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.654 27.679 39.238 35.93 47.418 0 58.576 0 37 37 46 0 56 0 1 1 1 0 1 0 2682.2 2199 1436 2150 5168 5914 5914 1 AVFDETYPDPVR Unmodified 1407.667 0.66704513 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7.33 4.03 1 1 1 62.355 62.355 2 8.8401E-13 22114 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.03 106.57 0 98.35 44.452 107.66 62.584 127.2 0 93 46 102 65 121 0 2 2 3 2 3 20484 2200 2382 2151 5169;5170;5171 5915;5916;5917 5917 3 AVFKGGQDNIPVLK Unmodified 1484.8351 0.83511351 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 9 0 1 62.805 62.805 3 0.00023421 19211 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.688 65.385 138.51 57.882 115.93 0 102.4 125 130 65 111 0 102 120 1 1 1 0 1 1 12389 2201 106 2152 5172 5918 5918 1 AVFKGGQDNIPVLK Deamidation (N) 1485.8191 0.81912909 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 1 11 0 1 62.167 62.167 3 0.020009 16560 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.009 38.131 0 0 136.49 93.514 0 88.478 0 0 130 93 0 83 0 0 1 1 0 1 4972.6 2202 106 2152 5173 5919 5919 34 1 AVFLAAQK Unmodified 846.49634 0.49633839 2925 Q9CQF0 Mrpl11 39S ribosomal protein L11, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 58.327 58.327 2 0.0020578 14892 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.96 82.916 0 38.936 25.835 47.696 55.414 28.267 0 37 28 46 56 28 0 1 1 1 1 1 10889 2203 2925 2153 5174;5175 5920;5921 5920 2 AVFPSIVGR Unmodified 944.54435 0.54435122 1673;1781;1791 P60710;E9Q1F2;E9Q5F4;G3UZ07;E9Q606;E9Q2D1;F6WX90;P63260;B1ATY1;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 0 9.67 3.27 1 1 3 2 1 1 62.998 62.998 2;3 1.7886E-25 15269 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 193.96 140.78 10889 5486.7 7213.4 9311.1 10146 11750 10209 5586 7025 9049 10300 11267 16 13 7 12 13 13 6146500 2204 1673;1781;1791 2154 5176;5177;5178;5179;5180;5181;5182;5183;5184 5922;5923;5924;5925;5926;5927;5928;5929;5930;5931;5932;5933;5934;5935;5936;5937;5938;5939 5937 18 AVFPSIVGRPR Unmodified 1197.6982 0.6982261 1673;1781;1791 P60710;E9Q1F2;E9Q5F4;G3UZ07;E9Q606;E9Q2D1;F6WX90;P63260;B1ATY1;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 1 7.56 5.12 6 1 4 4 1 53.73 53.73 2;3 1.414E-64 11411 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 218.58 166.79 16004 20855 18947 15155 16249 17986 15088 21230 18966 15126 16709 17276 20 24 21 23 21 19 11746000 2205 1673;1781;1791 2155 5185;5186;5187;5188;5189;5190;5191;5192;5193;5194;5195;5196;5197;5198;5199;5200 5940;5941;5942;5943;5944;5945;5946;5947;5948;5949;5950;5951;5952;5953;5954;5955;5956;5957;5958;5959;5960;5961;5962;5963;5964;5965;5966;5967;5968;5969;5970;5971 5962 32 AVFQANQENLPILK Deamidation (N) 1584.8512 0.8511575 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 0 6.5 0.5 1 1 74.929 74.929 3 0.0035435 27111 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.306 47.866 78.713 35.128 86.01 53.277 149.14 93.816 74 37 84 56 148 92 2 1 2 2 2 2 9649.8 2206 2699 2156 5201;5202 5972;5973 5972 969 2 AVFQANQENLPILK Unmodified 1583.8671 0.86714192 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 9.83 2.34 1 1 2 2 72.642 72.642 2;3;4 6.542E-25 24651 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 144.57 103.48 542.38 162.02 546.66 354.55 384.6 407.17 509 167 525 343 389 385 5 1 4 4 5 2 127900 2207 2699 2156 5203;5204;5205;5206;5207;5208 5974;5975;5976;5977;5978;5979;5980 5975 7 AVFQESIR Unmodified 948.50288 0.50288033 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 6 0 1 50.51 50.51 2 0.018173 15595 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.605 18.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2208 810 2157 5209 5981 5981 1 AVFQYIDENQDR Unmodified 1496.6896 0.68957148 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 9.5 3.5 1 1 63.485 63.485 3 0.0030249 22834 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.863 47.223 0 47.695 74.725 55.701 56.017 0 0 46 74 56 56 0 0 1 1 1 1 0 5794.4 2209 3038 2158 5210;5211 5982;5983 5983 2 AVFVDLEPTVIDEIR Unmodified 1714.9142 0.91415169 44 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;A0A087WSB0;A0A087WSL5 Tuba4a Tubulin alpha-4A chain yes no 0 0 0 0 7.17 2.91 1 1 1 1 1 1 86.818 86.818 3 1.285E-26 33258 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.54 117.86 174.25 135.25 214.26 134.42 113.65 119.76 166 132 211 128 112 115 6 6 7 6 4 7 411220 2210 44 2159 5212;5213;5214;5215;5216;5217 5984;5985;5986;5987;5988;5989;5990;5991;5992;5993;5994;5995;5996;5997 5988 14 AVFVDLEPTVIDEIRNGPYR Deamidation (N) 2303.1798 0.17976186 44 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;A0A087WSB0;A0A087WSL5 Tuba4a Tubulin alpha-4A chain yes no 0 1 0 1 7.2 2.99 4 2 2 2 82.421 82.421 3;4 5.2036E-11 30190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.9 87.602 170.44 276.29 131.73 207 303.26 169.15 160 267 130 195 302 164 6 8 5 5 8 6 108440 2211 44 2160 5218;5219;5220;5221;5222;5223;5224;5225;5226;5227 5998;5999;6000;6001;6002;6003;6004;6005;6006;6007;6008 6003 7 11 AVFVDLEPTVIDEVR Unmodified 1700.8985 0.89850163 1313;1794 P05213;A0A2R8VHF3;P68369 Tuba1b;Tuba1a Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 0 5.57 1.81 3 26 4 1 1 1 1 92.614 92.614 2;3 6.8388E-171 31678 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 264.17 207.61 1006.1 1071.2 1389.1 942.69 1558.8 1370.5 947 1080 1369 929 1569 1320 21 26 23 22 28 26 2194200 2212 1313;1794 2161 5228;5229;5230;5231;5232;5233;5234;5235;5236;5237;5238;5239;5240;5241;5242;5243;5244;5245;5246;5247;5248;5249;5250;5251;5252;5253;5254;5255;5256;5257;5258;5259;5260;5261;5262;5263;5264 6009;6010;6011;6012;6013;6014;6015;6016;6017;6018;6019;6020;6021;6022;6023;6024;6025;6026;6027;6028;6029;6030;6031;6032;6033;6034;6035;6036;6037;6038;6039;6040;6041;6042;6043;6044;6045;6046;6047;6048;6049;6050;6051;6052;6053;6054;6055;6056;6057;6058;6059;6060;6061;6062 6017 54 AVFVLSSPLK Unmodified 1059.6328 0.63283187 2457 Q8BTY8 Scfd2 Sec1 family domain-containing protein 2 yes yes 0 0 0 0 12 0 1 74.437 74.437 2 5.5602E-05 19544 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.87 62.368 49.128 45.631 0 39.019 75.612 0 46 46 0 37 74 0 1 1 0 1 1 0 3410.1 2213 2457 2162 5265 6063 6063 1 AVGFVSEDEYLEIQGITR Unmodified 2025.0055 0.0054858935 765 D3Z396;Q8BG33;Q99PJ0 Ntm Neurotrimin yes no 0 0 0 0 9 4 1 1 80.099 80.099 3 7.556E-05 30810 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.281 42.342 59.683 35.775 37.824 78.953 131.06 37.564 56 38 38 75 130 37 2 2 2 2 3 2 14201 2214 765 2163 5266;5267 6064;6065;6066 6066 3 AVGHPFVIQLGR Unmodified 1292.7353 0.73533988 2222 Q6P5F9;F6YA11 Xpo1 Exportin-1 yes no 0 0 0 0 11 0 1 56.677 56.677 3 0.00061745 14274 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.103 41.273 0 29.792 0 60.025 62.915 67.495 0 28 0 56 65 65 0 1 0 1 1 1 7313.2 2215 2222 2164 5268 6067 6067 1 AVGIVGIER Unmodified 912.53927 0.53926584 2764 Q91XD6 Vps36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 0 7 0 1 54.274 54.274 2 0.0091108 16520 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.198 35.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2216 2764 2165 5269 6068 6068 1 AVGKDNFTLIPEGTNGTEER Deamidation (N) 2148.0335 0.033491558 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 1 6 1 1 1 63.443 63.443 3 4.6841E-06 20824 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.203 46.626 0 0 39.236 17.918 27.137 38.668 0 0 37 19 28 37 0 0 1 1 1 1 4888.7 2217 1158 2166 5270;5271 6069;6070 6070 309;310 2 AVGKDNFTLIPEGTNGTEER Unmodified 2147.0495 0.049475973 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 1 6 0 1 63.432 63.432 3 3.5415E-05 21699 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.9 45.6 48.777 29.545 72.639 0 0 49.036 46 32 69 0 0 46 1 1 1 0 0 1 12272 2218 1158 2166 5272 6071 6071 1 AVGKDNFTLIPEGVNGIEER Deamidation (N) 2158.0906 0.090612506 2212;1850;207 P97427;Q6P1J1;Q3TMU8;A0A0R4J1N0;O35098 Crmp1;Dpysl4 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 4 no no 0 1 0 1 6 0 1 69.749 69.749 3 0.0029921 24666 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.229 38.129 49.152 5.7651 29.702 0 0 0 46 9 28 0 0 0 1 1 1 0 0 0 2579.3 2219 1850;2212;207 2167 5273 6072 6072 72 1 AVGLISHVLEQNQEGDAAYR Unmodified 2169.0814 0.081444804 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 67.75 67.75 3;4 1.4111E-11 22271 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.89 92.403 0 127.8 56.196 117.32 34.981 126.92 0 121 56 111 37 120 0 3 1 3 1 2 19535 2220 150 2168 5274;5275;5276 6073;6074;6075 6074 3 AVGPASILK Unmodified 854.52255 0.52255314 108 A0A0H2UH20;E9PUD0;D3Z4U0;Q9R020 Zranb2 Zinc finger Ran-binding domain-containing protein 2 yes no 0 0 0 0 9.5 0.5 1 1 59.675 59.675 2 0.0025975 15876 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.302 41.136 59.62 57.851 182.28 98.386 118.9 174.63 56 56 176 102 120 167 1 1 2 2 1 2 7261.2 2221 108 2169 5277;5278 6076;6077 6077 2 AVGPEITK Unmodified 813.45962 0.45961853 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 7.75 3.11 1 1 1 1 48.718 48.718 2;3 0.01063 14676 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.711 37.73 356.96 360.42 294.98 335.31 356.53 345.87 336 366 300 329 360 334 3 3 2 3 2 3 102310 2222 2272 2170 5279;5280;5281;5282 6078;6079;6080;6081 6079 4 AVGTQALSGAGLLK Unmodified 1284.7402 0.74015049 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 0 9.5 0.5 1 1 66.45 66.45 2;3 9.9889E-15 18821 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.834 78.462 0 0 0 39.956 25.794 48.3 0 0 0 37 28 46 0 0 0 1 1 1 4238.4 2223 2207 2171 5283;5284 6082;6083 6083 2 AVGWNEVEGR Unmodified 1115.536 0.53597137 1699 P61458 Pcbd1 Pterin-4-alpha-carbinolamine dehydratase yes yes 0 0 0 0 5 0 1 51.329 51.329 2 2.1634E-05 16640 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.565 69.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2224 1699 2172 5285 6084 6084 1 AVGYICK Unmodified 809.41056 0.41055985 168 A0A0R4J0B4;Q99KK2 Cmas N-acylneuraminate cytidylyltransferase yes no 0 0 0 0 9 0 1 50.351 50.351 2 0.020324 13295 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.75 60.183 48.548 83.951 65.048 0 133.4 75.077 46 83 65 0 130 74 1 1 1 0 1 1 3935 2225 168 2173 5286 6085 6085 1 AVHADFFNDFEDLFDDDDVQ Unmodified 2372.971 0.97095088 752 D3Z159;Q3U898 Myeov2 Myeloma-overexpressed gene 2 protein homolog yes no 0 0 0 0 4.5 0.5 1 1 99.498 99.498 3 1.0711E-10 34649 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.455 83.357 6.4241 2.7588 0 0 0 0 6 3 0 0 0 0 1 1 0 0 0 0 2223.3 2226 752 2174 5287;5288 6086;6087 6086 2 AVHGFFTSNNATR Unmodified 1420.6848 0.68476088 1378 P14685 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 0 9.5 0.5 1 1 43.323 43.323 3 0.00015601 10175 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.176 53.103 69.468 54.9 0 0 0 59.696 65 56 0 0 0 56 1 1 0 0 0 1 4935.2 2227 1378 2175 5289;5290 6088;6089 6088 2 AVHISNPK Unmodified 864.48175 0.48175096 3329 Q9WUA2 Farsb Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 7 0 1 37.721 37.721 3 0.0098437 8842 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.565 38.006 48.999 0 60.345 0 56.948 47.411 46 0 56 0 56 46 1 0 1 0 1 1 2295.2 2228 3329 2176 5291 6090 6090 1 AVIAPSGVEK Unmodified 969.5495 0.54949617 1174 O09111 Ndufb11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 51.222 51.222 2;3 4.5282E-05 14511 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.3 48.547 276.32 242.7 188.93 279.73 160.7 301.36 259 241 185 269 166 287 3 3 2 3 2 3 31358 2229 1174 2177 5292;5293;5294;5295 6091;6092;6093;6094 6093 4 AVIESDEEQGR Unmodified 1231.5681 0.56805936 3001 Q9CZC8;A0A0N4SWD0 Scrn1 Secernin-1 yes no 0 0 0 0 4.4 4.36 1 1 2 1 37.761 37.761 2;3 2.1942E-42 10819 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 199.54 137.85 168.01 124.9 320.88 269.5 448.37 256.14 157 120 315 270 446 250 3 3 7 7 6 4 172710 2230 3001 2178 5296;5297;5298;5299;5300 6095;6096;6097;6098;6099;6100;6101;6102;6103 6098 9 AVIETLSK Unmodified 859.50148 0.50148335 2259 Q6XE40 Mpp3 yes yes 0 0 0 0 11.5 0.5 1 1 72.101 72.101 2 0.046558 20976 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.038 11.871 281.6 123.78 175.54 148 175.52 362.76 264 130 176 148 179 345 2 1 1 1 1 2 41930 2231 2259 2179 5301;5302 6104;6105 6104 2 AVIFCLSADK Unmodified 1122.5743 0.57433072 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 10 0 1 71.239 71.239 3 0.03596 21118 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.704 15.585 0 67.805 81.064 104.92 92.459 0 0 65 83 102 93 0 0 1 1 1 1 0 8944.6 2232 3301 2180 5303 6106 6106 1 AVIFCLSADKK Unmodified 1250.6693 0.66929373 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 1 8 4.97 1 1 1 63.688 63.688 3 2.6161E-05 15440 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.283 66.759 1200 977.76 75.384 1169.7 98.554 690.09 1123 995 74 1076 102 650 2 2 1 3 1 2 155120 2233 3301 2181 5304;5305;5306 6107;6108;6109 6109 3 AVIFEDCAVPVANR Unmodified 1559.7766 0.77661235 180 A0A0R4J0P1;D3YTT4;Q9D7B6 Acad8 Isobutyryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 6 0 1 65.421 65.421 3 0.001572 22530 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.232 37.637 20.215 0 28.923 28.531 18.563 0 19 0 28 28 19 0 1 0 1 1 1 0 4038.8 2234 180 2182 5307 6110 6110 1 AVILDLLQEALTEAGLTSK Unmodified 1984.1092 0.10922268 214 E0CXW7;E9QMF4;A0A0R4J1Y3 Osgep yes no 0 0 0 0 11 0 1 121.12 121.12 3 0.00055762 38124 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.677 37.823 9.6335 4.6704 0 0 0 14.924 9 5 0 0 0 14 1 1 0 0 0 1 765.25 2235 214 2183 5308 6111 6111 1 AVILELK Unmodified 784.50584 0.50584045 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 10.5 2.5 1 1 68.031 68.031 2 0.027191 22504 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.906 16.596 178.63 111.41 0 180.27 120.43 174.59 167 111 0 167 120 167 2 1 0 2 1 2 9245.6 2236 145 2184 5309;5310 6112;6113 6112 2 AVILGPPGSGK Unmodified 994.58113 0.58113065 3338 Q9WUR9;A2ARF6;A2ARF5 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 10.3 1.37 2 2 1 1 56.942 56.942 2;3 1.8438E-07 14636 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.21 57.165 137.52 231.04 207.88 196.44 183.37 243.96 129 222 204 185 186 232 3 3 3 3 3 3 65659 2237 3338 2185 5311;5312;5313;5314;5315;5316 6114;6115;6116;6117;6118;6119 6116 6 AVILIGGPQK Unmodified 994.61752 0.61751616 2807 Q922H4;D3Z2L8;D3YVK2;D3Z5Z5;D3Z0T7;D3Z3L0;D3Z3M0 Gmppa Mannose-1-phosphate guanyltransferase alpha yes no 0 0 0 0 11 0 1 62.711 62.711 2 1.8341E-05 16879 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.57 94.828 59.91 35.328 0 0 58.576 0 56 37 0 0 56 0 1 1 0 0 1 0 4257.4 2238 2807 2186 5317 6120 6120 1 AVIQHFQEK Unmodified 1098.5822 0.58219329 384 A0A2I3BQZ9;P12023;A0A2I3BPT1;Q3TWF3;A0A2I3BR03 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 0 7 0 1 45.416 45.416 3 0.0039974 12421 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.711 45.44 48.686 84.337 41.412 68.577 0 78.884 46 83 46 65 0 74 1 1 1 1 0 1 3818.1 2239 384 2187 5318 6121 6121 1 AVITSLLDQIPEMFADTR Unmodified 2019.0347 0.034677532 366 G3X972;A0A286YDI8;A0A286YD08 Sec24c yes no 0 0 0 0 9.5 0.5 1 1 106.83 106.83 3 5.4263E-05 33789 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.203 50.472 6.438 0 0 7.5592 11.159 0 6 0 0 7 11 0 1 0 0 1 2 0 2597.1 2240 366 2188 5319;5320 6122;6123 6123 2 AVIVPGNGGGDVATHGWYGWVK Deamidation (N) 2240.1015 0.10145196 1281 O88851 Rbbp9 Putative hydrolase RBBP9 yes yes 0 1 0 0 10.5 2.5 1 1 76.81 76.81 3 2.0192E-15 26610 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.725 75.782 29.814 29.315 67.184 27.774 76.128 0 28 28 65 28 74 0 1 1 2 1 2 0 8442.3 2241 1281 2189 5321;5322 6124;6125 6124 348 2 AVIVVQDIFGWQLPNTR Unmodified 1955.0629 0.062881613 2642 Q8R1G2;A0A2I3BPJ4;E0CXH4;E0CXT6 Cmbl Carboxymethylenebutenolidase homolog yes no 0 0 0 0 11.5 0.5 1 1 95.99 95.99 3 3.2432E-06 27497 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.579 82.788 9.6281 34.887 58.843 0 0 20.254 9 34 56 0 0 19 1 2 2 0 0 1 7869.4 2242 2642 2190 5323;5324 6126;6127;6128 6128 3 AVIYNPATQADWTAK Unmodified 1647.8257 0.82567103 1974 Q3UH59;Q61879;Q5SV64;Q8BXF2 Myh10 Myosin-10 yes no 0 0 0 0 8.5 0.5 1 1 67.815 67.815 3 1.6882E-05 22262 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.706 53.677 168.03 63.916 198.73 145.92 212.82 95.498 158 65 194 148 213 93 2 1 2 2 2 1 17844 2243 1974 2191 5325;5326 6129;6130 6129 2 AVLAALK Unmodified 684.45341 0.45341094 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 12 0 1 61.527 61.527 2 0.05734 14786 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.597 9.2659 0 78.736 0 109.74 92.961 100.75 0 74 0 102 97 97 0 1 0 1 1 1 6487.5 2244 3383 2192 5327 6131 6131 1 AVLAELPQQVVQYFK Unmodified 1731.956 0.95595693 202 A0A0R4J1D0;P59108 Cpne2 Copine-2 yes no 0 0 0 0 11 0 1 92.557 92.557 3 0.00072015 29750 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.607 47.047 9.477 0 30.248 0 37.384 58.629 9 0 28 0 37 56 1 0 1 0 1 2 3098.5 2245 202 2193 5328 6132;6133 6132 2 AVLAHVDVQTLSSQLAVTVGPGER Unmodified 2446.318 0.31798668 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 9 0 1 76.379 76.379 4 7.4316E-05 25574 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.077 29.539 49.137 0 37.158 58.993 0 59.696 46 0 37 56 0 56 1 0 1 1 0 1 5985.6 2246 195 2194 5329 6134 6134 1 AVLALHQDLFSLAQQCIDK Unmodified 2169.1252 0.12522387 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 10 0 1 81.847 81.847 4 0.036362 25817 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.767 9.2328 147.97 86.903 123.88 0 119.52 174.61 139 93 120 0 120 167 1 1 1 0 1 1 4635.4 2247 3243 2195 5330 6135 6135 1 AVLAQKPDK Unmodified 968.56548 0.56548059 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 1 9 0 1 44.738 44.738 3 0.0023283 10767 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.08 54.306 163.43 146.45 0 0 219.71 242.11 153 148 0 0 218 233 1 1 0 0 1 1 14881 2248 3285 2196 5331 6136 6136 1 AVLAQLGCPIK Unmodified 1168.6638 0.66381443 1928 Q3TL44 Nlrx1 NLR family member X1 yes yes 0 0 0 0 11 0 1 67.573 67.573 3 0.0002451 18942 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.228 36.183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2249 1928 2197 5332 6137 6137 1 AVLCPPPVK Unmodified 979.55247 0.55247306 1759;1675 Q3TLP8;P63001;P60764;A2AC13 Rac1;Rac3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 0 10 2 2 2 1 2 56.094 56.094 2;3 3.5685E-05 18977 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.35 53.716 409.06 509.54 668.74 472.58 760.56 530.26 385 509 666 472 763 514 6 8 8 7 9 8 100730 2250 1759;1675 2198 5333;5334;5335;5336;5337;5338;5339 6138;6139;6140;6141;6142;6143;6144;6145;6146;6147 6147 10 AVLDALLAGK Unmodified 969.58588 0.58588168 2483 Q8C052 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes yes 0 0 0 0 11 0 1 84.141 84.141 2 2.8866E-05 26285 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 125.16 84.173 0 67.727 85.743 0 84.851 57.275 0 65 83 0 83 56 0 1 1 0 1 1 4907.5 2251 2483 2199 5340 6148 6148 1 AVLDALLEGK Unmodified 1027.5914 0.59136099 510;1382 A2ARP8;Q9QYR6;P14873 Map1a;Map1b Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2;Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 no no 0 0 0 0 10.2 1.57 1 1 2 1 1 84.526 84.526 2;3 3.6553E-07 29448 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.11 64.183 375.37 188.28 231.81 138.15 210.57 20.005 352 195 222 130 204 19 7 4 4 3 3 1 87196 2252 510;1382 2200 5341;5342;5343;5344;5345;5346 6149;6150;6151;6152;6153;6154;6155;6156 6152 8 AVLDVAETGTEAAAATGVIGGIR Unmodified 2141.1328 0.13281167 174 A0A0R4J0I1;P07759 Serpina3k Serine protease inhibitor A3K yes no 0 0 0 0 6 0 1 82.572 82.572 3 2.9201E-12 30683 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.492 62.865 29.585 47.394 37.041 0 0 0 28 47 37 0 0 0 1 1 1 0 0 0 5232.8 2253 174 2201 5347 6157 6157 1 AVLEEEFR Unmodified 991.49746 0.4974606 1916 Q3TDK6 Rogdi Protein rogdi homolog yes yes 0 0 0 0 6.67 4.5 1 1 1 56.564 56.564 2 0.0013107 19418 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.12 7.2779 137.51 138.02 35.99 37.467 147.12 173.82 129 139 37 37 148 167 2 2 1 1 2 2 23318 2254 1916 2202 5348;5349;5350 6158;6159;6160 6159 3 AVLEQFLSFAK Unmodified 1251.6863 0.68632401 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 11.5 0.5 1 1 91.346 91.346 2;3 0.0010123 29273 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.548 43.546 59.811 21.389 28.419 38.747 32.426 20.254 56 22 28 37 31 19 2 1 1 1 1 1 15463 2255 3165 2203 5351;5352 6161;6162 6161 2 AVLFCLSDDKR Unmodified 1322.6653 0.66527099 1549 P45591;A0A1Y7VJ71 Cfl2 Cofilin-2 yes no 0 0 0 1 10.5 0.5 1 1 61.705 61.705 3 0.011935 16913 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.258 33.499 284.01 175.34 352.9 335.05 303.3 0 267 187 351 331 300 0 1 1 2 2 1 0 29888 2256 1549 2204 5353;5354 6163;6164 6163 2 AVLFCLSEDK Unmodified 1180.5798 0.57981002 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 8.33 0.471 2 1 72.144 72.144 2;3 0.00011116 24386 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.55 62.517 159.19 402.12 62.285 258.49 139.6 136.44 149 389 65 241 139 130 2 6 1 4 2 2 21483 2257 1410 2205 5355;5356;5357 6165;6166;6167;6168;6169;6170 6166 6 AVLFCLSEDKK Unmodified 1308.6748 0.67477304 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 10.6 1.4 2 2 1 1 1 64.418 64.418 2;3;4 3.6114E-26 17927 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 183.33 142.28 3030.7 3756.8 4632.6 4269.8 4094.9 4031.3 2855 3791 4655 4226 4203 3888 5 8 7 8 6 7 679150 2258 1410 2206 5358;5359;5360;5361;5362;5363;5364 6171;6172;6173;6174;6175;6176;6177;6178;6179;6180 6173 10 AVLGDDEITREPR Unmodified 1469.7474 0.74742071 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8;S4R2T8 Dlg1 Disks large homolog 1 yes no 0 0 0 1 3 0 1 46.77 46.77 3 0.025495 15117 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.189 23.963 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 5628.1 2259 767 2207 5365 6181 6181 1 AVLHVALR Unmodified 877.54977 0.54977095 1316 P06745;CON__Q3ZBD7;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 45.994 45.994 3 0.00019284 10103 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.94 103.82 323.79 480.79 548.28 496.26 286.01 594.13 305 481 546 492 297 565 4 6 5 7 3 6 371390 2260 1316 2208 5366;5367;5368;5369;5370;5371 6182;6183;6184;6185;6186;6187;6188;6189 6184 8 AVLIAGQPGTGK Unmodified 1110.6397 0.63970816 3320 Q9WTM5;A0A1B0GSR4;A0A1B0GRW3;A0A1B0GT54 Ruvbl2 RuvB-like 2 yes no 0 0 0 0 9 0 1 54.315 54.315 2 0.00013887 15152 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.549 47.102 39.36 36.269 26.629 29.017 0 0 37 37 28 28 0 0 1 1 1 1 0 0 3066.8 2261 3320 2209 5372 6190 6190 1 AVLIDKDQTPK Unmodified 1226.6871 0.68705229 2621 Q8QZS1 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 0 0 1 10.5 2.5 1 1 51.137 51.137 3 0.013734 14564 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.718 33.52 197.98 103.21 0 0 83.165 284.38 185 102 0 0 83 269 2 1 0 0 1 2 12068 2262 2621 2210 5373;5374 6191;6192 6191 2 AVLIMYK Unmodified 836.483 0.48299651 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 12 0 1 66.563 66.563 2 0.027399 16482 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.151 55.003 48.823 40.465 55.658 50.738 89.717 0 46 42 56 51 88 0 1 1 1 1 1 0 5426.2 2263 1220 2211 5375 6193 6193 1 AVLITYGPYAVNGK Deamidation (N) 1465.7817 0.78168095 1109 G5E8X1;Q9DCS2;E9Q7K5 0610011F06Rik UPF0585 protein C16orf13 homolog yes no 0 1 0 0 9 0 1 72.41 72.41 3 0.030592 23785 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.092 19.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2264 1109 2212 5376 6194 6194 294 1 AVLLDLEPR Unmodified 1024.5917 0.59169534 1830 Q8VCK3;P83887 Tubg2;Tubg1 Tubulin gamma-2 chain;Tubulin gamma-1 chain yes no 0 0 0 0 7 0 1 69.423 69.423 2 0.015108 23703 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.423 27.314 48.732 44.531 67.413 0 0 0 46 46 65 0 0 0 1 1 1 0 0 0 2822.9 2265 1830 2213 5377 6195 6195 1 AVLLGPPGAGK Unmodified 978.58622 0.58621603 1020 F7BP55;Q9WTP6 Ak2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed yes no 0 0 0 0 10.7 0.471 1 2 59.243 59.243 2;3 2.9854E-10 15235 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.62 41.439 118.55 110.11 0 121.32 0 0 111 111 0 111 0 0 2 2 0 1 0 0 13890 2266 1020 2214 5378;5379;5380 6196;6197;6198 6198 3 AVLLNLSTIELYGSNDPYRR Unmodified 2293.2066 0.20664532 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 1 11 0 1 79.374 79.374 3 2.3876E-06 24326 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.87 46.942 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 6198.4 2267 738 2215 5381 6199 6199 1 AVLLQSPPPCISQWR Unmodified 1750.9189 0.91885991 1962 Q3U5Q7 Cmpk2 UMP-CMP kinase 2, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 72.994 72.994 3 0.00057157 22021 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.732 48.319 0 33.019 61.578 30.54 77.756 101.18 0 32 60 32 79 97 0 1 1 1 2 2 10687 2268 1962 2216 5382;5383 6200;6201 6200 2 AVLNPTPIKR Unmodified 1107.6764 0.67642802 1837 P84096 Rhog Rho-related GTP-binding protein RhoG yes yes 0 0 0 1 10.5 0.5 1 1 46.532 46.532 3 0.0061812 10383 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.415 27.02 88.289 145.36 280.81 0 255.86 225.09 83 139 268 0 252 218 1 1 2 0 1 1 39835 2269 1837 2217 5384;5385 6202;6203 6202 2 AVLPLLDAQEPCYLLFR Unmodified 2017.0707 0.070669108 3361 Q9Z0P5;A0A1L1STC8;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 10 1.87 1 1 1 1 96.181 96.181 3 3.377E-34 38602 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.05 138.28 75.523 76.367 91.657 55.063 29.288 26.65 71 78 90 56 28 25 3 4 4 4 1 2 24916 2270 3361 2218 5386;5387;5388;5389 6204;6205;6206;6207;6208;6209 6209 6 AVLQAAR Unmodified 727.43407 0.43407249 3234 Q9JKR6;F6TRP3 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 0 8 0 1 37.304 37.304 2 0.056887 7974 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.717 25.311 78.439 71.759 100.96 105.47 0 0 74 74 102 102 0 0 1 1 1 1 0 0 5909.3 2271 3234 2219 5390 6210 6210 1 AVLQQYQHLPSFR Unmodified 1585.8365 0.83651049 2011 Q3UVL4 Vps51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 0 10 0 1 59.575 59.575 3 0.00017061 15868 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.83 47.281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2272 2011 2220 5391 6211 6211 1 AVLTSQETLFGGSDCTGNFCLFK Unmodified 2551.1723 0.17231 2797 Q921I1;E9Q035;F7CJN9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 8.67 0.471 1 2 88.073 88.073 3;4 9.083E-10 31016 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.422 50.407 29.744 27.331 85.723 75.773 0 29.848 28 28 84 74 0 28 1 1 2 2 0 1 4430 2273 2797 2221 5392;5393;5394 6212;6213;6214 6213 3 AVLVDLEPGTMDSVR Unmodified 1600.8131 0.81305744 1795;3072 P68372;Q9D6F9 Tubb4b;Tubb4a Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 6.67 2.98 1 2 1 1 1 72.54 72.54 2;3 8.6856E-42 27043 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 186.27 135.18 303.94 301.47 329.29 428.12 485.37 395.73 287 306 325 418 491 381 4 6 4 7 6 6 385180 2274 1795;3072 2222 5395;5396;5397;5398;5399;5400 6215;6216;6217;6218;6219;6220;6221;6222 6222 8 AVLVDLEPGTMDSVR Oxidation (M) 1616.808 0.80797206 1795;3072 P68372;Q9D6F9 Tubb4b;Tubb4a Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 1 0 6 0 1 66.384 66.384 3 0.025494 22972 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.967 20.409 69.522 0 37.543 48.04 0 59.696 65 0 37 46 0 56 1 0 1 1 0 1 11211 2275 1795;3072 2222 5401 6223 6223 146 1 AVLVVHPDK Unmodified 976.57057 0.57056597 2306;171 Q80TZ3;A0A0R4J0F6;Q99KY4;F6SLK1 Dnajc6;Gak Putative tyrosine-protein phosphatase auxilin;Cyclin-G-associated kinase no no 0 0 0 0 9.33 2.62 1 1 1 47.397 47.397 3 0.0014107 13487 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.934 22.924 453.35 274.27 397.94 53.63 354.14 274.97 426 287 379 56 345 263 3 2 2 1 2 2 50946 2276 2306;171 2223 5402;5403;5404 6224;6225;6226 6224 3 AVLVVHPDKATGQPYEQYAK Unmodified 2213.1481 0.14806781 2306;171 Q80TZ3;A0A0R4J0F6;Q99KY4;F6SLK1 Dnajc6;Gak Putative tyrosine-protein phosphatase auxilin;Cyclin-G-associated kinase no no 0 0 0 1 8 0 1 56.197 56.197 4 0.0026176 16862 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.633 26.691 0 24.08 23.441 0 28.291 29.041 0 23 23 0 28 28 0 1 1 0 1 1 3473.1 2277 2306;171 2224 5405 6227 6227 1 AVLYMCK Unmodified 883.42958 0.42958073 1175 O09114 Ptgds Prostaglandin-H2 D-isomerase yes yes 0 0 0 0 11 0 1 58.062 58.062 2 0.027066 14802 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.627 49.479 0 78.736 0 0 0 99.138 0 74 0 0 0 93 0 1 0 0 0 1 6758.1 2278 1175 2225 5406 6228 6228 1 AVMEIMTK Unmodified 921.46636 0.46636017 491 A2ALV3;Q62420;Q8BXU5;A2ALV1 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 8 0 1 64.414 64.414 3 0.0030658 20664 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.265 54.866 0 67.76 83.762 44.419 46.076 0 0 65 83 46 46 0 0 1 1 1 1 0 4519.5 2279 491 2226 5407 6229 6229 1 AVMHFLVNHVK Unmodified 1293.7016 0.70159692 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 4.67 5.19 2 1 61.367 61.367 3;4 0.00016557 13848 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.15 67.233 138.38 81.981 223.93 239.14 115.99 262.12 130 83 222 233 120 249 3 2 5 5 2 5 7888 2280 815;2590 2227 5408;5409;5410 6230;6231;6232;6233;6234 6233 5 AVMVSNVLLINK Unmodified 1299.7584 0.75844309 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 8 4.97 1 1 1 76.06 76.06 3 1.3554E-06 26291 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.82 73.19 59.91 144.92 40.034 101.65 38.702 157.77 56 140 37 93 37 148 1 4 1 1 1 3 54412 2281 3307 2228 5411;5412;5413 6235;6236;6237;6238;6239 6235 5 AVNTAPVPGQTPHDESDRR Unmodified 2045.9879 0.98787877 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 1 4 0 1 33.755 33.755 4 2.1032E-08 8569 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.585 63.184 0 20.216 0 15.302 0 0 0 19 0 14 0 0 0 1 0 1 0 0 4830.2 2282 355 2229 5414 6240 6240 1 AVNTAQGLFQR Unmodified 1203.636 0.63601977 69 A0A0A6YXG0;Q9JKK1 Stx6 Syntaxin-6 yes no 0 0 0 0 8 0 1 54.07 54.07 2 0.0031304 15760 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.781 49.626 59.862 44.908 0 49.637 34.076 68.318 56 46 0 46 37 65 1 1 0 1 1 1 4114.7 2283 69 2230 5415 6241 6241 1 AVNTQALSGAGILR Unmodified 1369.7678 0.76776223 2978 Q9CWK8 Snx2 Sorting nexin-2 yes yes 0 0 0 0 8 0 1 61.353 61.353 3 0.034333 19182 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.667 12.68 69.57 34.677 0 0 0 0 65 37 0 0 0 0 1 1 0 0 0 0 4244.1 2284 2978 2231 5416 6242 6242 1 AVNVYSTSVTSDNLSR Acetyl (Protein N-term) 1753.8483 0.84825697 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 1 0 0 0 3.5 0.5 1 1 63.568 63.568 2 1.4972E-11 22528 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.926 64.412 0 29.478 18.789 0 38.761 28.742 0 28 19 0 38 28 0 1 1 0 2 2 9527.8 2285 2115 2232 5417;5418 6243;6244 6244 2 AVNVYSTSVTSENLSR Acetyl (Protein N-term) 1767.8639 0.86390703 2243 Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 1 0 0 0 6.25 3.96 1 1 1 1 63.766 63.766 2 7.0968E-45 22653 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.12 91.732 88.521 0 90.442 0 152.04 85.748 83 0 84 0 149 84 2 0 2 0 3 2 27553 2286 2243 2233 5419;5420;5421;5422 6245;6246;6247;6248 6246 4 AVNYFSK Unmodified 827.41775 0.41775372 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 54.421 54.421 2;3 0.012879 15239 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.9 54.189 1478.3 1545.3 1272.8 1723.1 1461.7 1642.9 1389 1566 1275 1671 1527 1571 6 7 4 7 7 6 530720 2287 2185 2234 5423;5424;5425;5426;5427 6249;6250;6251;6252;6253;6254;6255 6250 7 AVPATQIFFK Unmodified 1120.6281 0.62808085 2593 Q8K1S4 Unc5a Netrin receptor UNC5A yes yes 0 0 0 0 11 0 1 72.263 72.263 2 0.014458 21137 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.518 21.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2288 2593 2235 5428 6256 6256 1 AVPEHAAR Unmodified 849.4457 0.4456998 3367 Q9Z0Y1;E9Q919 Dctn3 Dynactin subunit 3 yes no 0 0 0 0 7 4.32 1 1 1 22.745 22.745 3 0.0023921 4025 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.37 54.876 20.234 47.26 19.108 39.96 68.539 78.654 19 46 19 38 69 75 1 2 1 2 2 1 7969.2 2289 3367 2236 5429;5430;5431 6257;6258;6259 6257 3 AVPFPPSHR Unmodified 1006.5348 0.53484916 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 9.14 1.73 1 1 4 1 42.051 42.051 3 0.00028828 10386 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.72 64.172 421.62 659.79 725.81 519.74 178.46 1080.2 399 643 716 500 176 1016 10 7 8 5 4 9 41543 2290 1786 2237 5432;5433;5434;5435;5436;5437;5438 6260;6261;6262;6263;6264;6265;6266;6267;6268;6269;6270;6271;6272;6273;6274;6275 6266 16 AVPFPPTHR Unmodified 1020.5505 0.55049923 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 8.5 0.5 1 1 44.173 44.173 3 0.013033 10272 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.482 36.328 0 0 0 91.136 35.921 39.442 0 0 0 84 37 37 0 0 0 2 1 1 8065.3 2291 811 2238 5439;5440 6276;6277 6277 2 AVPFQNAVLNVK Unmodified 1298.7347 0.73467118 2383 Q8BGR6 Arl15 ADP-ribosylation factor-like protein 15 yes yes 0 0 0 0 9.5 0.5 1 1 70.1 70.1 3 4.6593E-07 22660 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.596 70.284 0 0 0 39.785 34.858 58.701 0 0 0 37 37 56 0 0 0 1 1 1 5816.6 2292 2383 2239 5441;5442 6278;6279 6278 2 AVPLAGFGYGLPISR Unmodified 1516.8402 0.84019889 2358 Q8BFP9 Pdk1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 0 0 0 0 11 0.816 1 1 1 80.655 80.655 2;3 1.8309E-22 24872 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 142.08 104.61 68.589 56.375 47.261 19.083 0 69.29 66 56 47 19 0 65 2 2 2 1 0 1 22882 2293 2358 2240 5443;5444;5445 6280;6281;6282;6283 6281 4 AVPLNASK Unmodified 798.45995 0.45995289 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 0 8 0.816 1 1 1 46.491 46.491 2 0.008163 12212 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.56 54.776 260.76 103.79 268.51 192.5 245.99 136.37 245 107 260 195 246 130 3 2 2 2 2 2 30875 2294 3343 2241 5446;5447;5448 6284;6285;6286 6285 3 AVPLPMTVR Unmodified 982.56337 0.5633721 2582;2386 Q8BGT8;F7D3N3;F6U6Z2;Q8K0S0;E0CXJ1 Phyhipl;Phyhip Phytanoyl-CoA hydroxylase-interacting protein-like;Phytanoyl-CoA hydroxylase-interacting protein no no 0 0 0 0 10.5 2.5 1 1 59.924 59.924 2 0.0041941 20984 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.072 31.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2295 2386;2582 2242 5449;5450 6287;6288 6288 2 AVPLTQYQR Unmodified 1074.5822 0.58219329 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 0 7.5 0.5 1 1 47.245 47.245 2 0.0002539 12602 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.72 89.036 108.7 119.26 128.81 93.155 43.452 166.12 102 121 130 93 46 157 1 2 2 2 1 2 13243 2296 1901 2243 5451;5452 6289;6290 6290 2 AVPPTYADLGK Acetyl (Protein N-term) 1172.6077 0.60773933 978 F2Z471 Vdac1 yes yes 1 0 0 0 7 3.54 1 1 1 1 68.697 68.697 2 0.00098163 24305 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.247 66.418 1346 968.91 1351.9 1441.1 1057.8 1114.1 1265 1013 1353 1402 1096 1067 13 13 11 12 12 12 110450 2297 978 2244 5453;5454;5455;5456 6291;6292;6293;6294;6295;6296;6297;6298;6299;6300;6301;6302;6303;6304;6305 6300 15 AVPREELFVTSK Unmodified 1374.7507 0.75071518 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 1 8 0 1 55.127 55.127 3 0.015493 16308 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.135 32.823 0 0 0 40.441 0 59.696 0 0 0 37 0 56 0 0 0 1 0 1 3180 2298 3214 2245 5457 6306 6306 1 AVPSEAPR Unmodified 825.43447 0.43446642 2666 Q8R4U7 Luzp1 Leucine zipper protein 1 yes yes 0 0 0 0 4 0 1 33.79 33.79 2 0.03951 8565 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.903 23.136 0 20.216 0 15.302 0 0 0 19 0 14 0 0 0 1 0 1 0 0 2496.5 2299 2666 2246 5458 6307 6307 1 AVPTDEAR Unmodified 857.4243 0.42429566 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;G3UZL4;E9PZB2;F6R2Z5 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 6 4.97 1 1 1 32.156 32.156 2 1.2347E-10 8417 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 176.41 96.472 370.66 249.29 70.029 177.07 142.82 74.808 347 254 65 162 139 74 2 1 1 1 1 1 59825 2300 1556 2247 5459;5460;5461 6308;6309;6310 6309 3 AVPVSPSAVEEDEDEDGHTVVATAR Unmodified 2579.1987 0.19871899 640 B9EHJ3;P39447 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 2 0 1 55.46 55.46 3 0.00093257 18627 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.087 34.289 20.387 0 0 9.837 0 20.254 19 0 0 9 0 19 1 0 0 1 0 1 2350.3 2301 640 2248 5462 6311 6311 1 AVQADGQVK Unmodified 914.48214 0.48214489 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 6 0 1 38.865 38.865 2 0.019456 10150 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.535 4.8873 29.807 46.934 0 0 77.404 0 28 46 0 0 74 0 1 1 0 0 1 0 4027.8 2302 3327 2249 5463 6312 6312 1 AVQADQER Unmodified 915.44101 0.44100836 2809 Q922Q8 Lrrc59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 0 3 0 1 25.456 25.456 2 0.011506 5333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.162 31.163 29.787 17.736 28.232 19.084 0 0 28 19 28 19 0 0 1 1 1 1 0 0 2284.7 2303 2809 2250 5464 6313 6313 1 AVQFFVQALR Unmodified 1177.6608 0.66077796 1021 F7BTP8;Q9QYI3 Dnajc7 DnaJ homolog subfamily C member 7 yes no 0 0 0 0 12 0 1 79.005 79.005 2 9.8639E-05 21285 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.44 54.317 39.406 0 49.573 30.604 0 49.036 37 0 46 28 0 46 1 0 1 1 0 1 8496 2304 1021 2251 5465 6314;6315 6314 2 AVQFGTGELCDAISAVEEK Unmodified 2022.9568 0.95682114 1113 H3BIY2;Q6ZPU9 2510003E04Rik;Kbp KIF1-binding protein yes no 0 0 0 0 5 0 1 84.739 84.739 3 3.8656E-05 32198 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.54 39.051 20.387 0 0 9.3067 28.193 19.45 19 0 0 9 28 19 1 0 0 1 1 1 1849.5 2305 1113 2252 5466 6316 6316 1 AVQFTEEK Unmodified 950.47091 0.4709115 533;3225 A2AWI7;A2AWI9;Q8R3V5;Q9JK48;A0A0G2JEC4 Sh3glb2;Sh3glb1 Endophilin-B2;Endophilin-B1 no no 0 0 0 0 9.25 3.77 1 1 2 49.855 49.855 2;3 0.001186 16035 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.79 75.201 325.35 206.6 327.42 570.11 438.52 520.49 306 213 325 547 454 500 3 2 2 4 3 4 43313 2306 533;3225 2253 5467;5468;5469;5470 6317;6318;6319;6320 6320 4 AVQGCGAHPAIR Unmodified 1235.6193 0.61932385 1885 Q04690;A0A1W2P863 Nf1 Neurofibromin yes no 0 0 0 0 6 0 1 30.448 30.448 3 0.042097 6179 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.94 13.596 59.958 25.749 0 0 42.802 32.891 56 28 0 0 42 32 1 1 0 0 1 1 2918.1 2307 1885 2254 5471 6321 6321 1 AVQHLQTISNLSENQASEEEDELGELR Unmodified 3038.4429 0.44286544 2088 Q60829 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B yes yes 0 0 0 0 4 0 1 65.909 65.909 4 1.7267E-05 23564 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.559 43.055 0 0 19.685 19.594 0 20.254 0 0 19 19 0 19 0 0 1 1 0 1 3496.8 2308 2088 2255 5472 6322 6322 1 AVQLYQQTANVFENEER Unmodified 2037.9756 0.97558275 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7.33 2.62 1 2 2 1 70.161 70.161 2;3 2.3537E-34 25579 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.83 103.3 59.727 66.243 93.742 102.97 155.9 134.91 56 65 93 102 158 130 2 2 2 3 3 2 73148 2309 775 2256 5473;5474;5475;5476;5477;5478 6323;6324;6325;6326;6327;6328 6323 6 AVQPTSGEPR Unmodified 1040.5251 0.52507234 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 4.5 0.5 1 1 31.221 31.221 2 0.0033321 7391 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.029 32.932 69.324 16.593 56.671 57.83 0 0 65 19 56 56 0 0 2 1 2 2 0 0 6812.4 2310 287 2257 5479;5480 6329;6330 6329 2 AVQQPDGLAVLGIFLK Unmodified 1667.961 0.9610423 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 0 10.7 1.49 3 2 2 1 2 97.057 97.057 2;3;4 1.0062E-24 34764 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 139.65 108.26 271.54 141.71 118.86 228.61 211.28 178.94 261 136 113 213 214 171 4 4 4 5 5 4 160850 2311 1296 2258 5481;5482;5483;5484;5485;5486;5487;5488;5489;5490 6331;6332;6333;6334;6335;6336;6337;6338;6339;6340;6341;6342;6343 6332 13 AVQSEDDARQDVIQDVEISR Unmodified 2272.0931 0.093131702 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 1 1 0 1 56.396 56.396 3 0.001134 17825 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.968 39.216 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1793.4 2312 204 2259 5491 6344 6344 1 AVQSIGNLGQQLGQGK Deamidation (N) 1597.8424 0.84238373 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 1 0 0 13 0 1 63.2 63.2 3 2.6206E-05 22725 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.729 47.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2313 3391 2260 5492 6345 6345 1143 1 AVQSLDK Unmodified 759.41267 0.41266834 2901 Q9CPW4 Arpc5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 0 6 0 1 43.912 43.912 2 0.027043 12529 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.308 7.0438 218.01 189.07 348.94 0 0 285.69 206 197 334 0 0 268 1 1 1 0 0 1 22717 2314 2901 2261 5493 6346 6346 1 AVSASALR Unmodified 773.43955 0.43955179 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6 0 1 38.368 38.368 2 0.0621 9909 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.917 14.225 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2315 2186 2262 5494 6347 6347 1 AVSDASAGDYGSAIETLVTAISLIK Unmodified 2451.2745 0.27445011 1114 H3BKW0;H3BJ30;H3BJW3;Q6NVF9 Cpsf6 Cleavage and polyadenylation specificity factor subunit 6 yes no 0 0 0 0 10.7 1.7 1 1 1 116.22 116.22 4 4.8755E-20 34866 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.922 68.191 0 28.728 0 9.7274 5.8292 15.99 0 27 0 9 6 15 0 3 0 1 1 2 4258.9 2316 1114 2263 5495;5496;5497 6348;6349;6350 6349 3 AVSEEIESILQSGHLDEEK Unmodified 2112.0223 0.02225817 1932 Q3TMH2 Scrn3 Secernin-3 yes yes 0 0 0 0 4 0 2 80.798 80.798 3;4 2.5136E-06 30440 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.522 58.076 0 39.96 28.261 49.687 0 0 0 38 28 47 0 0 0 2 1 2 0 0 3828.9 2317 1932 2264 5498;5499 6351;6352 6352 2 AVSEVSINR Unmodified 973.51926 0.51925868 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 6 0 1 42.471 42.471 2 0.021008 11816 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.216 25.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2318 784 2265 5500 6353 6353 1 AVSILPLLGHGVPR Unmodified 1427.8613 0.86126868 2814 Q923D5 Wbp11 WW domain-binding protein 11 yes yes 0 0 0 0 12 0 1 70.255 70.255 3 6.9986E-05 17816 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.183 65.495 49.358 0 0 0 29.288 0 46 0 0 0 28 0 1 0 0 0 1 0 5572.8 2319 2814 2266 5501 6354 6354 1 AVSIVGNEVFR Unmodified 1189.6455 0.64552182 2475 Q8BX70 Vps13c Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 0 7 0 1 64.069 64.069 2 0.030308 21111 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.6 31.762 20.244 28.427 0 39.747 36.876 0 19 28 0 37 37 0 1 1 0 1 1 0 2393.5 2320 2475 2267 5502 6355 6355 1 AVSLLLQR Unmodified 898.56 0.56000128 3017 Q9D061;A0A0A6YWZ1 Acbd6 Acyl-CoA-binding domain-containing protein 6 yes no 0 0 0 0 12 0 1 62.294 62.294 2 0.0053715 15014 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.833 15.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2321 3017 2268 5503 6356 6356 1 AVSPEGDER Unmodified 958.43559 0.43558863 2356 Q811P8 Arhgap32 Rho GTPase-activating protein 32 yes yes 0 0 0 0 1 0 1 29.778 29.778 2 0.00022737 6656 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.28 66.972 0 0 66.949 75.886 53.458 47.511 0 0 65 74 56 46 0 0 1 1 1 1 9286.8 2322 2356 2269 5504 6357 6357 1 AVSQVHRINETK Deamidation (N) 1381.7314 0.73137672 479 A2AJL3 Fggy FGGY carbohydrate kinase domain-containing protein yes yes 0 1 0 1 11 0 1 57.414 57.414 3 0.062541 14558 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.257 25.942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2323 479 2270 5505 6358 6358 1 AVSSFFSGSCVPCADPVAFPK Unmodified 2229.0235 0.023460919 2797 Q921I1;D3YYR8 Tf;Trf Serotransferrin yes no 0 0 0 0 9 0 1 82.18 82.18 4 0.033819 28321 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 30.21 21.047 0 58.63 57.074 0 0 39.442 0 56 56 0 0 37 0 1 1 0 0 1 5613.1 2324 2797 2271 5506 6359 6359 1 AVSSLATAK Unmodified 846.48108 0.48108226 102 A0A0G2JGQ6;Q9JLM8;Q80VB6 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 9 0 1 47.442 47.442 2 0.0013139 11916 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.55 61.437 0 82.212 110.32 108.79 84.094 86.078 0 79 111 107 88 83 0 1 1 1 1 1 7225.4 2325 102 2272 5507 6360 6360 1 AVSSPTVSR Unmodified 902.48214 0.48214489 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 8.11 2.56 1 2 1 3 1 1 33.751 33.751 2;3 1.5628E-18 6424 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 148.99 90.3 535.03 382.54 390.38 450.28 396.9 601.88 502 391 402 437 398 574 5 4 4 5 4 4 218470 2326 2291 2273 5508;5509;5510;5511;5512;5513;5514;5515;5516 6361;6362;6363;6364;6365;6366;6367;6368;6369 6365 9 AVSSQMIGQK Unmodified 1047.5383 0.53827956 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 48.475 48.475 2;3 0.0021461 13121 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.157 16.361 158.23 115.9 178.2 100.52 114.24 214.2 149 120 176 102 120 204 2 1 2 1 1 2 15384 2327 3397 2274 5517;5518 6370;6371 6370 2 AVSTCAHLFWSGR Unmodified 1490.7089 0.70886714 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 10 0 1 55.822 55.822 3 0.00039413 14154 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.034 52.768 69.42 64.479 0 39.411 54.769 58.133 65 65 0 37 56 56 1 1 0 1 1 1 4576.4 2328 3174 2275 5519 6372 6372 1 AVSYLGPK Unmodified 833.4647 0.46470391 1173 O08997 Atox1 Copper transport protein ATOX1 yes yes 0 0 0 0 10 1.87 1 1 1 1 52.75 52.75 2 0.00037184 12833 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 154.31 73.011 662.37 350.06 689.5 560.8 854.73 555.33 622 352 675 561 860 537 3 3 3 3 4 3 81136 2329 1173 2276 5520;5521;5522;5523 6373;6374;6375;6376 6375 4 AVTDEEPFLIFANR Unmodified 1620.8148 0.814772 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 5.5 0.5 1 1 81.272 81.272 3 0.00011164 30818 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.412 41.606 9.657 20.216 0 51.023 18.484 20.254 9 19 0 47 19 19 1 1 0 2 1 1 6562.9 2330 175 2277 5524;5525 6377;6378 6377 2 AVTEETVK Unmodified 875.46001 0.46001246 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 7.33 4.03 1 1 1 41.947 41.947 2;3 0.0012186 12623 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.86 57.867 88.475 35.594 67.997 0 77.404 0 83 37 65 0 74 0 2 1 1 0 1 0 7201.9 2331 1506 2278 5526;5527;5528 6379;6380;6381 6379 3 AVTEGAQAVEEPSIC Unmodified 1559.7137 0.71373732 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 2 0.816 1 1 1 61.099 61.099 2;3 1.674E-07 21628 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.89 87.59 89.002 20.088 17.166 20.312 38.741 29.31 83 19 18 19 38 28 2 1 2 1 2 1 36597 2332 2736 2279 5529;5530;5531 6382;6383;6384 6384 3 AVTELNEPLSNEDR Deamidation (N) 1586.7424 0.74239491 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 1 0 0 2.2 0.748 1 2 2 55.622 55.622 3 0.00028757 19399 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.65 74.514 49.73 36.59 105.81 36.595 55.925 28.252 47 37 103 37 56 28 2 1 3 1 1 1 13988 2333 1797 2280 5532;5533;5534;5535;5536 6385;6386;6387;6388;6389 6388 730;731 5 AVTELNEPLSNEDR Unmodified 1585.7584 0.75837933 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 4.57 3.58 2 2 1 1 1 53.402 53.402 2;3 1.7553E-42 18318 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 188.48 172.63 293.73 222.73 261.56 173.28 468.59 372.05 278 224 251 167 461 359 6 4 5 4 5 5 522520 2334 1797 2280 5537;5538;5539;5540;5541;5542;5543 6390;6391;6392;6393;6394;6395;6396;6397 6393 8 AVTEMNGR Deamidation (N) 877.39637 0.39636635 1484;549 P29341;A2A5N3;Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9 Pabpc1;Pabpc1l;Pabpc4 Polyadenylate-binding protein 1;Polyadenylate-binding protein no no 0 1 0 0 4 0 1 36.113 36.113 2 0.053575 9711 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.161 46.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2335 1484;549 2281 5544 6398 6398 142 1 AVTEQGAELSNEER Unmodified 1531.7114 0.71142914 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 3.25 3.77 3 2 2 1 41.859 41.859 2;3 2.3685E-193 12672 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 277.63 208.25 449.49 214.15 468.97 429.67 390.86 365.94 422 223 461 421 397 352 7 4 6 7 6 5 888540 2336 1005 2282 5545;5546;5547;5548;5549;5550;5551;5552 6399;6400;6401;6402;6403;6404;6405;6406 6402 8 AVTEQGAELSNEER Deamidation (N) 1532.6954 0.69544472 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 1 0 0 1.5 0.5 1 1 43.096 43.096 3 0.0025761 13101 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.377 52.722 58.469 37.116 60.267 66.796 34.93 28.851 55 38 56 65 37 28 2 1 1 2 1 1 12834 2337 1005 2282 5553;5554 6407;6408 6408 265 2 AVTEQGHELSNEER Unmodified 1597.7332 0.73322721 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 4.14 3.72 1 1 3 1 1 33.156 33.156 2;3 1.1129E-81 8504 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 221.63 184.29 403.15 229.89 537.46 213.4 600.63 404.18 379 232 520 213 592 391 5 3 7 3 6 7 506350 2338 2944 2283 5555;5556;5557;5558;5559;5560;5561 6409;6410;6411;6412;6413;6414;6415;6416;6417 6411 9 AVTEQGHELSNEER Deamidation (N) 1598.7172 0.7172428 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 1 0 0 1 0 2 34.536 34.536 3 2.1654E-41 8657 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 187.16 152.16 38.992 94.977 80.479 77.031 7.825 20.031 37 93 83 75 9 19 1 2 2 2 1 1 25646 2339 2944 2283 5562;5563 6418;6419 6418 1028 2 AVTGTDVDIVFSK Unmodified 1350.7031 0.70309628 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 9.5 3.5 1 1 71.699 71.699 2;3 2.0456E-12 26638 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.46 70.938 29.807 46.934 0 0 66.371 47.142 28 46 0 0 65 46 1 1 0 0 1 1 5050.7 2340 2963 2284 5564;5565 6420;6421 6421 2 AVTIFIR Unmodified 818.50142 0.50142377 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 13 0 1 62.214 62.214 2 0.037938 22216 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.939 28.251 0 0 0 60.012 63.612 47.221 0 0 0 56 65 46 0 0 0 1 1 1 8179 2341 1825 2285 5566 6422 6422 1 AVTISGTPDAIIQCVK Unmodified 1671.8866 0.88655673 1647 P57722;E9Q7D8 Pcbp3 Poly(rC)-binding protein 3 yes no 0 0 0 0 7 0 1 72.368 72.368 3 0.00068428 25021 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.403 25.434 0 48.03 54.691 67.785 0 69.29 0 46 56 65 0 65 0 1 1 1 0 1 3621.6 2342 1647 2286 5567 6423 6423 1 AVTLDPNFLDAYINLGNVLK Unmodified 2189.1732 0.17321992 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 10.8 1.48 1 1 1 1 104.34 104.34 3 9.4473E-11 33438 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.684 66.955 18.599 19.403 58.297 0 0 9.594 18 19 55 0 0 9 2 1 2 0 0 1 8347.9 2343 2543 2287 5568;5569;5570;5571 6424;6425;6426;6427 6425 4 AVTLHDQGTTQWADLSSQFYLR Unmodified 2536.2347 0.23465098 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7 0.707 1 2 1 74.707 74.707 3;4 3.2724E-18 26070 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.09 91.322 177.56 173.15 128.14 95.041 92.573 145.53 167 176 130 93 93 139 4 4 3 2 2 3 22891 2344 1876 2288 5572;5573;5574;5575 6428;6429;6430;6431 6429 4 AVTLQGNLDPCALYASEEEIGR Unmodified 2405.1533 0.15328912 1819 P70697 Urod Uroporphyrinogen decarboxylase yes yes 0 0 0 0 5 0 1 77.191 77.191 3 0.014749 28793 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.592 15.502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2345 1819 2289 5576 6432 6432 1 AVTNMTLNFGPQHPAAHGVLR Unmodified 2230.1429 0.14293962 2754 Q91WD5;D3YXT0;A0A0A6YW30 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 9 0 1 55.189 55.189 4 0.0021347 15576 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.521 26.041 0 0 0 0 0 158 0 0 0 0 0 158 0 0 0 0 0 1 8590.5 2346 2754 2290 5577 6433 6433 1 AVTPAPPMK Unmodified 910.49462 0.49462383 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 0 7 0 1 49.128 49.128 2 0.016722 14076 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.981 34.184 49.122 26.188 17.446 29.038 27.954 0 46 28 19 28 28 0 1 1 1 1 1 0 1384.7 2347 3380 2291 5578 6434 6434 1 AVTPPMPLLTPATPGGLPPAAAVAAAAATAK Unmodified 2793.5463 0.54627206 1968 Q3UEB3 Puf60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 0 10 0 1 93.724 93.724 4 0.008437 30491 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.104 23.545 20.207 0 30.194 0 0 29.848 19 0 28 0 0 28 1 0 1 0 0 1 3361.8 2348 1968 2292 5579 6435 6435 1 AVTSAEER Unmodified 861.41921 0.41921028 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 3 0 1 27.502 27.502 2 0.024955 6261 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.877 33.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2349 3322 2293 5580 6436 6436 1 AVVDAGITTK Unmodified 973.54441 0.5444108 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 7 0 1 52.404 52.404 3 0.0083768 15669 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.683 32.781 59.195 0 150.1 0 113.51 75.645 56 0 139 0 111 74 1 0 1 0 1 1 3751.2 2350 3241 2294 5581 6437 6437 1 AVVEEWLSEFK Unmodified 1335.6711 0.67106787 2508 Q8C729;E0CZ67;A0A087WSI2 Fam126b Protein FAM126B yes no 0 0 0 0 9.33 2.62 1 1 1 91.403 91.403 2;3 0.00067315 36228 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.977 38.648 0 28.961 49.691 39.767 29.288 20.254 0 28 47 38 28 19 0 2 1 2 1 1 6478.3 2351 2508 2295 5582;5583;5584 6438;6439;6440 6440 3 AVVFETGEAGAASGAGSLPGEVR Unmodified 2131.0546 0.054561351 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.33 4.03 1 1 1 66.054 66.054 3 1.3674E-18 23683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.75 91.492 89.039 130.81 90.029 27.336 144.21 28.24 84 130 92 28 140 28 2 3 3 1 3 1 34910 2352 510 2296 5585;5586;5587 6441;6442;6443 6441 3 AVVFLLLLFLK Unmodified 1274.8366 0.83661706 658 CON__P06868 yes yes 0 0 0 0 13 0 1 69.433 69.433 3 0.0049249 25781 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.608 1.0109 69.176 0 95.666 103.51 120.77 0 65 0 93 102 120 0 1 0 1 1 1 0 12183 + 2353 658 2297 5588 6444 6444 1 AVVGEEALTSDDLLYLEFLQK Unmodified 2352.2101 0.21005894 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 8 3.56 2 2 2 98.184 98.184 3;4 3.5918E-30 35749 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.12 114.33 78.417 140.15 178.8 180.44 148.87 133.13 74 139 177 175 153 128 3 5 4 7 6 5 51235 2354 1741 2298 5589;5590;5591;5592;5593;5594 6445;6446;6447;6448;6449;6450;6451;6452;6453 6445 9 AVVGVVAGGGR Unmodified 940.54541 0.54541385 1757 P62918 Rpl8 60S ribosomal protein L8 yes yes 0 0 0 0 8 0 1 45.734 45.734 2 0.0030932 11986 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.127 39.32 69.474 53.835 0 0 76.124 37.27 65 55 0 0 74 37 1 1 0 0 1 1 5721.4 2355 1757 2299 5595 6454 6454 1 AVVIVDDR Unmodified 885.49198 0.4919813 2724;2839 Q8VIJ6;Q99K48 Sfpq;Nono Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein no no 0 0 0 0 6.33 2.62 1 1 1 46.581 46.581 2 0.0013031 15203 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.6 75.433 69.745 98.159 47.458 129.69 136.49 85.917 65 93 46 121 139 83 1 2 1 2 2 1 30287 2356 2724;2839 2300 5596;5597;5598 6455;6456;6457 6456 3 AVVIYQEPPPK Unmodified 1239.6863 0.68632401 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 7 0 1 57.16 57.16 3 0.00065148 17913 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.006 49.127 39.516 36.703 0 40.441 0 39.442 37 37 0 37 0 37 1 1 0 1 0 1 3584.6 2357 2890 2301 5599 6458 6458 1 AVVIYQEPPPKK Unmodified 1367.7813 0.78128702 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 1 8 0 1 52.247 52.247 3 0.00057399 14922 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.555 55.205 118.23 39.067 113.92 72.762 70.726 97.12 111 46 111 74 74 93 1 1 1 1 1 1 6053.1 2358 2890 2302 5600 6459 6459 1 AVVLAANHFGR Unmodified 1153.6356 0.63562584 2142 Q61941;E9Q8F4;Q8C9V5;Q8BGK0 Nnt NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 47.975 47.975 3 1.2503E-10 10686 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 136.99 110.77 0 96.616 139.76 108.62 0 0 0 93 139 107 0 0 0 1 1 1 0 0 11519 2359 2142 2303 5601 6460 6460 1 AVVLAGFGGLNK Unmodified 1144.6604 0.66044361 2300 Q80TB8;D3Z434 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 0 4.67 5.19 2 1 73.043 73.043 2;3 2.7995E-32 18789 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 182.39 170.62 63.712 130.09 85.803 114.32 487.63 21.529 60 125 83 117 471 23 3 3 2 4 4 1 66262 2360 2300 2304 5602;5603;5604 6461;6462;6463;6464;6465 6464 5 AVVLHPLLYTFASGSPDNIK Unmodified 2141.1521 0.15209055 777 Q922V4;D3Z4V1 Plrg1 Pleiotropic regulator 1 yes no 0 0 0 0 11 0 1 76.606 76.606 3 0.00046551 22990 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.047 30.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2361 777 2305 5605 6466 6466 1 AVVLMGK Unmodified 716.42548 0.42548163 1381 P14869;D3YVM5;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 11 0 1 57.548 57.548 2 0.035769 14556 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.672 38.549 142.6 0 199.45 0 0 0 134 0 185 0 0 0 1 0 1 0 0 0 24974 2362 1381 2306 5606 6467 6467 1 AVVLPISLATTFK Unmodified 1358.8173 0.81733818 2684 Q8VCN5 Cth Cystathionine gamma-lyase yes yes 0 0 0 0 6.5 5.5 1 1 87.833 87.833 3 0.0004084 31378 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.879 52.614 28 0 40.034 0 0 39.442 28 0 37 0 0 37 1 0 1 0 0 1 5654.1 2363 2684 2307 5607;5608 6468;6469 6468 2 AVVNDATIFK Unmodified 1076.5866 0.58660996 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 7 0 1 63.417 63.417 2 0.0025174 20820 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.652 33.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2364 823 2308 5609 6470 6470 1 AVVNGYSASDTVGAGFAQAK Deamidation (N) 1912.9167 0.91667089 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 1 0 0 8.67 3.09 1 1 1 65.23 65.23 3;4 1.6386E-11 23535 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.088 61.208 58.668 0 58.249 96.244 44.694 87.203 55 0 56 92 46 83 1 0 1 2 1 2 10949 2365 2585 2309 5610;5611;5612 6471;6472;6473 6473 945 3 AVVNGYSASDTVGAGFAQAK Unmodified 1911.9327 0.9326553 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 6 0 1 65.986 65.986 3 0.02717 22793 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 32.121 13.288 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 4010.8 2366 2585 2309 5613 6474 6474 1 AVVNLFLVAK Unmodified 1072.6645 0.66446635 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 1 0 1 83.055 83.055 2 3.3918E-14 29136 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.5 101.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2367 1201 2310 5614 6475 6475 1 AVVQVFEGTSGIDAK Unmodified 1519.7882 0.7882229 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 8.33 2.29 1 2 1 1 1 70.253 70.253 2;3 3.2831E-26 24868 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 150.05 115.3 860.76 317.29 702.7 757.68 567.82 409.8 807 334 686 734 567 389 8 3 7 8 5 4 281890 2368 1741 2311 5615;5616;5617;5618;5619;5620 6476;6477;6478;6479;6480;6481;6482;6483;6484 6476 9 AVVTHSSGNHGQALTYAAK Unmodified 1910.9599 0.9598731 3297 Q9QZX7;Z4YMF3;A8Y5D6 Srr Serine racemase yes no 0 0 0 0 7.5 0.5 1 1 39.116 39.116 4 3.0956E-08 9555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.346 61.25 89.577 52.732 48.548 61.208 37.054 47.979 84 56 46 56 37 46 2 2 1 1 1 1 8695.7 2369 3297 2312 5621;5622 6485;6486 6485 2 AVVVCPK Unmodified 771.4313 0.43129529 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 13 0 1 45.879 45.879 2 0.02025 14452 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.84 60.271 0 77.131 95.998 0 0 78.884 0 74 93 0 0 74 0 1 1 0 0 1 8111.8 2370 2714 2313 5623 6487 6487 1 AVVVEEPVGELR Unmodified 1295.7085 0.70851601 2062 Q5SUR0;F6RUL9 Pfas Phosphoribosylformylglycinamidine synthase yes no 0 0 0 0 3.33 0.471 2 1 58.819 58.819 2;3 2.0965E-11 20695 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.7 76.711 20.292 38.74 19.365 0 94.672 38.375 19 38 19 0 93 37 1 2 1 0 3 1 7276.5 2371 2062 2314 5624;5625;5626 6488;6489;6490 6488 3 AVVVGFDPHFSYMK Unmodified 1595.7806 0.7806351 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 9 0 1 71.12 71.12 3 0.026075 23174 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.799 24.446 118.64 90.952 0 138.58 186.73 103.4 111 93 0 130 188 102 1 1 0 1 1 1 4009.1 2372 2547 2315 5627 6491 6491 1 AVVVLVENFYK Unmodified 1279.7176 0.71762413 760 D3Z2Y6;Q9D708 S100a16 yes no 0 0 0 0 10 0 1 85.203 85.203 3 0.0061788 27179 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.278 35.705 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2041 2373 760 2316 5628 6492 6492 1 AVVVNAAQLASYSQSK Unmodified 1634.8628 0.86278482 2957 Q9CR62;Q5SX46 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 8.5 4.39 1 1 1 1 66.416 66.416 2;3 2.3009E-44 16425 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 142.45 116.34 39.549 119.05 38.753 0 48.494 19.437 37 120 38 0 47 19 1 3 2 0 2 1 31622 2374 2957 2317 5629;5630;5631;5632 6493;6494;6495;6496 6496 4 AVVVTDGER Unmodified 944.49271 0.49270958 2432 Q8BMF3;Q99KE1 Me3;Me2 NADP-dependent malic enzyme, mitochondrial;NAD-dependent malic enzyme, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 39.037 39.037 2 3.4993E-05 11112 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.27 78.457 119.1 0 0 80.882 0 133.7 111 0 0 74 0 130 1 0 0 1 0 2 18409 2375 2432 2318 5633;5634 6497;6498 6497 2 AVVWGLFR Unmodified 946.53887 0.53887191 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7 6 1 1 76.846 76.846 2 0.0051555 26702 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.6 61.245 129.09 73.021 63.542 46.211 72.973 106.65 121 74 65 47 74 102 3 2 2 2 2 3 16420 2376 570 2319 5635;5636 6499;6500;6501 6499 3 AVWLPAMK Unmodified 914.50479 0.50479459 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 11.5 0.5 1 1 71.724 71.724 2 0.0045085 18537 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.7 59.531 121.17 153.5 130.88 184.92 155.84 209.82 114 154 130 179 164 201 1 2 1 2 2 2 101660 2377 1203 2320 5637;5638 6502;6503 6503 2 AVWLPAVK Unmodified 882.53272 0.5327239 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 11.4 1.02 1 2 1 1 70.196 70.196 2;3 0.0012226 20272 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.99 57.396 1583.1 1240.2 1424.6 959.69 1077.1 695.72 1488 1256 1368 899 1065 669 8 7 6 4 6 5 739250 2378 3123 2321 5639;5640;5641;5642;5643 6504;6505;6506;6507;6508;6509;6510;6511;6512 6508 9 AVYDTDPAK Unmodified 978.46583 0.46582612 753 Q9JL62;D3Z1H9;D3Z1H8 Gltp Glycolipid transfer protein yes no 0 0 0 0 5 0 1 45.798 45.798 2 0.01466 13921 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.825 43.223 59.465 34.092 75.731 44.701 56.523 0 56 37 74 46 56 0 1 1 1 1 1 0 3601.2 2379 753 2322 5644 6513 6513 1 AVYEDRPPGSVVPTSVAEASR Unmodified 2186.0968 0.096760517 2726 Q91V09;S4R225;A2AC24 Wdr13 WD repeat-containing protein 13 yes no 0 0 0 1 4.5 0.5 1 1 53.465 53.465 3 1.0993E-10 17603 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.666 67.004 0 9.2557 19.16 48.993 65.739 0 0 9 19 47 65 0 0 1 1 2 2 0 5501.6 2380 2726 2323 5645;5646 6514;6515 6515 2 AVYLFYGTK Unmodified 1060.5593 0.55933258 3309 Q9R1C6 Dgke Diacylglycerol kinase epsilon yes yes 0 0 0 0 11.5 0.5 1 1 70.562 70.562 2 0.014177 18026 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.256 38.321 0 33.608 26.343 80.469 46.119 0 0 32 28 79 46 0 0 1 1 2 1 0 8314.4 2381 3309 2324 5647;5648 6516;6517 6517 2 AVYVATGLK Unmodified 920.53312 0.53311783 2970 Q9CTY5;F6WMX7 Micu3 Calcium uptake protein 3, mitochondrial yes no 0 0 0 0 10 0 1 57.847 57.847 2 0.0014944 15004 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.43 21.962 99.576 42.23 0 49.219 56.315 0 93 46 0 46 56 0 1 1 0 1 1 0 3943.8 2382 2970 2325 5649 6518 6518 1 AVYVPAKPAR Unmodified 1070.6237 0.62366417 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 1 11 0 1 44.478 44.478 3 0.014205 9496 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.916 39.821 64.38 0 0 101.65 0 0 60 0 0 93 0 0 1 0 0 1 0 0 6839.3 2383 2343 2326 5650 6519 6519 1 AWCQVAQK Unmodified 989.47529 0.47528537 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 10.5 2.5 1 1 50.919 50.919 2;3 0.0077128 14428 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.981 37.411 128.81 128.59 62.183 127.2 71.561 67.248 121 130 65 121 74 65 2 2 1 2 1 1 9961.4 2384 1579 2327 5651;5652 6520;6521 6520 2 AWDDFFPGSDR Unmodified 1311.552 0.55201537 2675 Q8R5J9 Arl6ip5 PRA1 family protein 3 yes yes 0 0 0 0 6 0 1 75.797 75.797 2 0.021389 27493 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.043 30.805 0 39.368 0 48.724 82.611 57.339 0 37 0 46 83 56 0 1 0 1 1 1 4195.3 2385 2675 2328 5653 6522 6522 1 AWDVLLDHIQSAALSK Unmodified 1765.9363 0.93628412 2304 Q80TL7;B9EKJ3 Mon2 Protein MON2 homolog yes no 0 0 0 0 11 0 1 86.015 86.015 3 0.00013957 27207 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.641 45.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2386 2304 2329 5654 6523 6523 1 AWESLEEAEYQR Unmodified 1509.6736 0.67358707 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 3 0 1 62.886 62.886 3 0.00037801 22567 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.44 52.901 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2387 893 2330 5655 6524 6524 1 AWFLGLNK Unmodified 947.52289 0.52288749 161 A0A338P764;A0A0R4J063;O89096;P61329;P70379 Fgf14;Fgf12 Fibroblast growth factor;Fibroblast growth factor 12;Fibroblast growth factor 14 yes no 0 0 0 0 4.67 5.19 2 1 79.144 79.144 2 0.0023079 21094 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.75 71.196 364.13 263.65 509.74 103.08 451.34 402.85 342 273 498 102 445 389 5 5 7 3 5 6 46736 2388 161 2331 5656;5657;5658 6525;6526;6527;6528;6529;6530;6531;6532 6532 8 AWFVSLDGKPVAQVR Unmodified 1671.9097 0.90967544 1905 Q14CH0 Fam171b Protein FAM171B yes yes 0 0 0 1 11 0 1 69.905 69.905 3 0.0022107 20027 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.862 37.427 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 8316.6 2389 1905 2332 5659 6533 6533 1 AWGAVVPLVGK Unmodified 1095.6441 0.64406526 2800 Q921M7;A0A2I3BRN5;A0A2I3BPH9 Fam49b Protein FAM49B yes no 0 0 0 0 11.5 0.5 1 1 75.901 75.901 2;3 0.0059559 22596 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.579 32.249 59.681 0 114.41 36.364 0 69.29 56 0 111 37 0 65 1 0 2 1 0 1 12217 2390 2800 2333 5660;5661 6534;6535 6534 2 AWGNNQDGVVASQPAR Deamidation (N) 1669.7808 0.78084611 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 1 0 0 6.2 3.43 2 2 1 49.697 49.697 3 8.2265E-06 15691 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.471 48.566 99.265 142.33 169.93 210.69 237.95 270.9 93 140 167 205 242 259 2 4 3 4 4 4 34380 2391 1681 2334 5662;5663;5664;5665;5666 6536;6537;6538;6539;6540;6541 6541 648;649 6 AWGNNQDGVVASQPAR Unmodified 1668.7968 0.79683052 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 7.67 2.56 1 1 2 1 1 47.363 47.363 2;3 1.1435E-61 14737 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.68 142.66 54.575 33.232 91.258 177.23 50.839 111.55 51 33 89 168 56 106 2 2 3 4 1 2 54004 2392 1681 2334 5667;5668;5669;5670;5671;5672 6542;6543;6544;6545;6546;6547 6547 6 AWNAVCPLVVR Unmodified 1283.6809 0.68086147 2410 Q8BHZ0 Fam49a Protein FAM49A yes yes 0 0 0 0 10.5 0.5 1 1 68.18 68.18 2 0.00060098 19621 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.143 64.4 49.358 0 0 20.056 37.781 0 46 0 0 19 37 0 1 0 0 1 1 0 4602.8 2393 2410 2335 5673;5674 6548;6549 6548 2 AWNAYPYCR Unmodified 1199.5182 0.51821282 1148;1615 J3QQ30;J3QPW1;P53810;F8WGG5;Q8JZZ5;P53811 Pitpna;Pitpnb Phosphatidylinositol transfer protein alpha isoform;Phosphatidylinositol transfer protein beta isoform no no 0 0 0 0 10 2.16 1 1 1 53.605 53.605 2 6.9249E-05 14873 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 133.6 103.35 147.6 135.52 145.15 61.208 224.89 114.02 139 139 139 56 222 111 2 2 1 1 2 1 27460 2394 1148;1615 2336 5675;5676;5677 6550;6551;6552 6551 3 AWNIWADIPAPK Unmodified 1380.719 0.71902112 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3;E9Q1G1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 10.5 1.5 1 2 1 85.181 85.181 2;3 0.00019819 33272 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.695 54.138 69.235 66.506 29.298 39.788 38.702 78.696 65 65 28 38 37 75 2 1 1 2 1 3 21776 2395 3122 2337 5678;5679;5680;5681 6553;6554;6555;6556;6557 6557 5 AWNLICDVSR Unmodified 1232.5972 0.59719142 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9 0 1 70.911 70.911 2 0.010556 23080 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.719 37.855 49.017 0 57.332 67.628 0 0 46 0 56 65 0 0 1 0 1 1 0 0 3601.2 2396 3025 2338 5682 6558 6558 1 AWNLLQK Unmodified 871.49159 0.49158736 3128 Q9DBL7 Coasy Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes no 0 0 0 0 11.5 0.5 1 1 67.951 67.951 2 0.030212 19167 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.113 24.113 0 0 89.806 0 0 118.33 0 0 83 0 0 111 0 0 1 0 0 1 9965.9 2397 3128 2339 5683;5684 6559;6560 6559 2 AWNTEDDLPVYLAR Unmodified 1661.8049 0.80493559 2212 Q6P1J1;Q71H75 Crmp1 yes no 0 0 0 0 8 3.56 1 1 1 74.261 74.261 3 7.4351E-05 27443 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.173 46.38 113.43 149.11 106.29 56.202 125.2 116.92 107 149 106 56 126 112 3 3 2 1 3 2 36983 2398 2212 2340 5685;5686;5687 6561;6562;6563 6561 3 AWNYYPYTITEYTCSFLPK Unmodified 2416.1086 0.10857076 2616 Q8K4R4;A0A0A0MQ88;X1WI19 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 0 10 0 1 92.682 92.682 3 1.2546E-08 30137 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.97 67.91 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1326.4 2399 2616 2341 5688 6564 6564 1 AWTVLVEYYK Unmodified 1270.6598 0.6597749 2099 Q6NZM8;Q60967 Papss1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 0 11 0 1 83.908 83.908 3 0.041779 26208 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.318 22.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2400 2099 2342 5689 6565 6565 1 AWVWNTHADFADECPKPELLAIR Unmodified 2738.3275 0.32750551 1508 P34022;H7BX22 Ranbp1 Ran-specific GTPase-activating protein yes no 0 0 0 1 8 0 1 76.851 76.851 4 0.00030778 26634 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.413 38.425 0 58.467 66.822 0 75.098 67.147 0 56 65 0 74 65 0 1 1 0 1 1 7107.9 2401 1508 2343 5690 6566 6566 1 AYAALAALEK Unmodified 1019.5651 0.56514624 306 Q45VK5;A0A1L1STE4;Q9Z1X4;A0A1L1SQR7 Ilf3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 9 0 1 69.908 69.908 2 0.0031661 22582 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.749 52.092 0 59.584 0 100.15 79.916 67.01 0 56 0 93 83 65 0 1 0 1 1 1 4658.1 2402 306 2344 5691 6567 6567 1 AYAEFYR Unmodified 918.42357 0.42356738 2893 Q9CPQ1 Cox6c Cytochrome c oxidase subunit 6C yes yes 0 0 0 0 9.5 3.5 1 1 51.391 51.391 2 0.026295 16581 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.006 55.2 148.09 87.222 104.38 0 97.278 0 139 93 102 0 93 0 1 1 1 0 1 0 42583 2403 2893 2345 5692;5693 6568;6569 6569 2 AYAGDKAEEIGR Unmodified 1278.6204 0.62042929 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 5.5 0.5 1 1 42.775 42.775 3 9.947E-06 12519 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.89 75.769 147.41 162.28 185.3 148.42 122.44 195.85 139 167 185 148 130 187 1 2 1 1 1 1 23764 2404 2186 2346 5694;5695 6570;6571 6570 2 AYAQQLTDWAK Unmodified 1293.6354 0.63535107 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 66.77 66.77 2;3 2.3633E-20 24252 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 176.6 104.36 317.86 187.11 446.87 367.73 185.74 551.15 299 195 440 364 185 522 3 2 4 4 1 4 127350 2405 2133 2347 5696;5697;5698;5699 6572;6573;6574;6575 6575 4 AYAQQLTEWAR Unmodified 1335.6571 0.65714914 3350 Q9WVE8;Q3UP40;A0A2R8W750 Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 0 13 0 1 63.269 63.269 2 0.0065544 22730 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.415 36.161 49.011 0 58.26 46.806 0 59.696 46 0 56 46 0 56 1 0 1 1 0 1 5606 2406 3350 2348 5700 6576 6576 1 AYCHILLGK Unmodified 1073.5692 0.56918576 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 9 0 1 55.803 55.803 3 0.055049 15843 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.709 13.664 78.834 0 95.516 105.79 0 78.884 74 0 93 102 0 74 1 0 1 1 0 1 4737.7 2407 2983 2350 5701 6577 6577 1 AYDATCLVK Unmodified 1039.5008 0.50083142 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43 Esd S-formylglutathione hydrolase yes no 0 0 0 0 6.5 0.5 1 1 56.524 56.524 3 0.001598 17562 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.732 52.94 127.32 214.91 187.77 217.36 226.14 190.76 120 213 195 213 232 185 1 2 2 2 2 2 13573 2408 1122 2351 5702;5703 6578;6579 6579 2 AYDATTHFETTCDDIKDIYK Unmodified 2406.0686 0.068556435 2132 Q61598 Gdi2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 1 5 0 1 63.408 63.408 4 4.7563E-13 22332 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.96 91.408 108.4 89.974 99.819 103.27 120.78 0 102 93 102 102 120 0 1 1 1 1 1 0 7762.1 2409 2132 2352 5704 6580 6580 1 AYDHDSR Unmodified 862.35694 0.35694438 40 A0A0A0MQ92;A0A0A0MQB7;Q9WTS5 Tenm2 Teneurin-2;Ten-2, soluble form;Ten-2 intracellular domain yes no 0 0 0 0 3 0 1 17.819 17.819 3 0.034322 2566 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.676 32.657 0 6.2319 9.101 5.9053 5.864 4.0967 0 6 9 6 6 4 0 1 1 1 1 1 375.52 2410 40 2353 5705 6581 6581 1 AYDLVVDWPVTLVR Unmodified 1644.8875 0.88754301 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 0 9.33 2.62 1 1 1 91.489 91.489 3 7.0643E-25 33162 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 143.94 121.71 9.5357 40.357 29.668 50.537 49.741 53.301 9 39 31 50 50 52 1 2 2 3 2 3 36570 2411 3151 2354 5706;5707;5708 6582;6583;6584;6585;6586 6584 5 AYEDGCK Unmodified 841.32762 0.32761808 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 5 0 1 35.984 35.984 2 0.052604 9217 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.854 15.496 63.57 63.498 82.291 75.977 0 69.29 60 65 83 74 0 65 1 1 1 1 0 1 6723.3 2412 2092 2355 5709 6587 6587 1 AYEFAER Unmodified 884.40283 0.40283194 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 4.5 0.5 1 1 44.886 44.886 2 0.016482 13931 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.82 44.781 316.1 406.49 313.87 329.15 288.09 376.61 297 407 314 315 296 361 3 4 3 3 3 3 213950 2413 2185 2356 5710;5711 6588;6589;6590;6591 6589 4 AYFHLLNQIAPK Unmodified 1413.7769 0.77687035 269;2018 A0A1C7CYV0;B1AX58;Q99K51;Q3V0K9 Pls3;Pls1 Plastin-3;Plastin-1 no no 0 0 0 0 9.5 4.92 1 2 1 69.469 69.469 3;4 9.3974E-14 17419 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.98 109.75 257.36 193.67 42.549 273.6 79.246 288.76 241 199 42 254 83 273 3 3 1 3 1 3 81170 2414 269;2018 2357 5712;5713;5714;5715 6592;6593;6594;6595 6593 4 AYGENIGYSEK Unmodified 1229.5564 0.55643205 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 0 7 3.16 1 1 1 1 1 49.963 49.963 2;3 1.6933E-07 16330 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.35 63.187 852.97 722.66 1127 1198.1 1301.3 1462.7 803 749 1135 1180 1339 1407 3 4 5 5 4 5 290630 2415 1369 2358 5716;5717;5718;5719;5720 6596;6597;6598;6599;6600 6596 5 AYGENIGYSEKDR Unmodified 1500.6845 0.68448611 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 1 7.33 4.03 1 1 1 43.717 43.717 3 1.1212E-21 13023 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 160.46 117.91 515.6 603.63 0 1042.8 636.25 439.14 482 600 0 965 656 425 1 2 0 3 2 1 113710 2416 1369 2359 5721;5722;5723 6601;6602;6603 6602 3 AYGILMATTSR Unmodified 1182.6067 0.60669348 2968 Q9CS84;E0CY11;H3BK93 Nrxn1 Neurexin-1 yes no 0 0 0 0 12 0 1 62.661 62.661 2 0.041091 15117 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.193 28.903 0 29.337 27.245 28.98 0 39.442 0 28 28 28 0 37 0 1 1 1 0 1 2284 2417 2968 2360 5724 6604 6604 1 AYGLALAK Unmodified 805.46979 0.46978929 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 10.6 1.36 1 2 1 1 60.265 60.265 2 0.0020578 15715 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.96 55.218 569.51 699.43 764.53 759.15 1012 1077.8 537 696 764 751 1030 1034 3 4 3 3 4 4 115580 2418 1537 2361 5725;5726;5727;5728;5729 6605;6606;6607;6608;6609 6606 5 AYGLLVATTSR Unmodified 1150.6346 0.63462279 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 0 0 0 11 0 1 61.198 61.198 2 0.0016249 16222 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.355 50.547 0 77.312 85.167 0 0 0 0 74 83 0 0 0 0 1 1 0 0 0 12987 2419 889 2362 5730 6610;6611 6611 2 AYHEQLSVAEITNACFEPANQMVK Unmodified 2749.284 0.28398571 1313;1794;44 A0A0A0MQA5;P68368;P05213;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 6.55 2.23 4 4 1 1 1 70.755 70.755 3;4;5 3.4523E-35 24852 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.86 121.26 752.83 437.61 698.28 787.97 735.18 543.4 708 452 686 770 745 517 13 13 12 16 14 11 248970 2420 44;1313;1794 2363 5731;5732;5733;5734;5735;5736;5737;5738;5739;5740;5741 6612;6613;6614;6615;6616;6617;6618;6619;6620;6621;6622;6623;6624;6625;6626;6627;6628;6629;6630 6619 19 AYHEQLSVAEITNACFEPANQMVK Deamidation (N) 2750.268 0.2680013 1313;1794;44 A0A0A0MQA5;P68368;P05213;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 1 0 0 5 0 1 69.563 69.563 3 2.0565E-13 25172 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.042 58.364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2421 44;1313;1794 2363 5742 6631 6631 8 1 AYHEQLSVAEITNACFEPANQMVK Oxidation (M) 2765.2789 0.27890034 1313;1794;44 A0A0A0MQA5;P68368;P05213;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 1 0 6 0 1 66.089 66.089 4 6.3165E-10 22857 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.425 50.663 59.958 25.749 0 38.872 83.43 46.655 56 28 0 37 83 46 1 1 0 1 1 1 9389.2 2422 44;1313;1794 2363 5743 6632 6632 2 1 AYHEQLSVAEITSSCFEPNSQMVK Oxidation (M);Deamidation (N) 2771.2418 0.24184613 3223 Q9JJZ2 Tuba8 Tubulin alpha-8 chain yes yes 0 1 1 0 5 0 1 70.635 70.635 4 0.0011955 25700 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.76 25.043 39.418 26.716 25.004 78.358 54.977 0 37 28 28 74 56 0 1 1 1 1 1 0 4346.1 2423 3223 2364 5744 6633 6633 1108 200 1 AYHLACK Unmodified 861.41671 0.41670786 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 9 0 1 38.519 38.519 3 0.0073345 8264 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.377 45.272 575.02 446.41 0 596.24 667.66 564.05 538 456 0 557 683 547 1 1 0 1 1 1 35104 2424 2133 2365 5745 6634 6634 1 AYIATQGPLAETTEDFWR Unmodified 2067.9902 0.99017018 568;642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;B0V2N1 Ptprd;Ptprs Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase S no no 0 0 0 0 6.5 0.5 1 1 81.246 81.246 3 9.0196E-05 30032 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.366 44.599 49.358 0 0 20.767 0 75.848 46 0 0 19 0 74 1 0 0 1 0 2 6961 2425 642;568 2366 5746;5747 6635;6636 6635 2 AYICTYK Unmodified 917.43169 0.43168922 3116 Q9DB75 Cdip1 Cell death-inducing p53-target protein 1 yes yes 0 0 0 0 9 0 1 51.44 51.44 2 0.034637 13804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.116 35.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2426 3116 2367 5748 6637 6637 1 AYIDSFR Unmodified 870.42357 0.42356738 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 13 0 1 52.686 52.686 2 0.048917 17635 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.833 20.743 117.8 88.594 144.49 0 109.77 184.48 111 93 139 0 111 176 1 1 1 0 1 1 8849 2427 2803 2368 5749 6638 6638 1 AYILNLVK Unmodified 932.5695 0.56950333 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 5.86 5.62 4 2 1 74.534 74.534 2;3 0.00055578 25667 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 151.51 62.92 916.16 1085.9 592.76 928.63 1484.7 1242.1 858 1088 588 891 1501 1195 4 7 4 6 8 5 151440 2428 1824 2369 5750;5751;5752;5753;5754;5755;5756 6639;6640;6641;6642;6643;6644;6645;6646;6647;6648 6639 10 AYIVQLQIEDLTR Unmodified 1560.8512 0.8511575 693 D3YVH4;E9Q4Q2;D3YZC9;D3YZD0;Q64213 Sf1 Splicing factor 1 yes no 0 0 0 0 8 0 1 80.773 80.773 2 0.00057486 28411 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.695 42.433 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 1429.2 2429 693 2370 5757 6649 6649 1 AYLDQTVVPILLQGLAVLAK Unmodified 2124.2558 0.25582734 2867 Q99LT0 Dpy30 Protein dpy-30 homolog yes yes 0 0 0 0 12.5 0.5 1 1 118.77 118.77 3 3.9264E-11 31543 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.859 49.041 0 12.768 0 0 15.093 15.731 0 12 0 0 15 15 0 2 0 0 2 2 4792 2430 2867 2371 5758;5759 6650;6651;6652 6650 3 AYLDSTER Unmodified 953.44543 0.44542503 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 5 0 1 40.242 40.242 2 0.038503 11288 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.312 26.083 59.423 43.689 74.671 55.583 62.459 86.696 56 46 74 56 65 83 1 1 1 1 1 1 3382.7 2431 823 2372 5760 6653 6653 1 AYLESEVAISEELVQK Unmodified 1806.9251 0.92511031 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 3.33 1.7 1 1 1 82.141 82.141 3 0.00010321 31104 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.168 50.251 49.005 25.861 95.751 17.505 92.794 107.15 46 28 93 19 93 103 1 1 4 1 3 3 6122.3 2432 2886 2373 5761;5762;5763 6654;6655;6656;6657 6655 4 AYLESFYK Unmodified 1019.4964 0.49639797 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 10 1.87 1 1 1 1 66.929 66.929 2;3 0.0012726 21172 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.85 88.41 798.55 592.92 719.12 759.83 616.71 815.22 751 611 727 745 631 779 5 4 4 5 3 3 135480 2433 1606 2374 5764;5765;5766;5767 6658;6659;6660;6661;6662 6659 5 AYLPVNESFGFTADLR Unmodified 1798.889 0.88899957 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 7.5 0.5 1 1 81.226 81.226 2;3 3.7662E-05 29207 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.378 62.546 39.397 46.875 28.498 0 86.236 47.411 37 47 28 0 84 46 1 2 1 0 2 1 17513 2434 1652 2375 5768;5769 6663;6664 6663 2 AYLQQLR Unmodified 890.4974 0.49740102 1126 H7BWZ3;Q9JM76;D3Z2F7;D3Z2F8;A0A0G2JFK7 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 9 0.816 1 1 1 49.772 49.772 2 0.0093986 13059 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.32 77.522 187.24 831.04 959.64 828.98 884.79 874.46 176 808 968 826 911 844 1 3 3 3 3 3 137760 2435 1126 2376 5770;5771;5772 6665;6666;6667 6666 3 AYLSEGPYYVKPVATTAVEGAD Unmodified 2300.1212 0.12124393 2418 Q8BJY1;F7BA91 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes no 0 0 0 1 6 0 1 73.454 73.454 3 0.00040369 26434 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.036 35.021 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 2684.3 2436 2418 2377 5773 6668 6668 1 AYLTVLADQATPTNR Deamidation (N) 1633.8312 0.83115034 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;Q810U3 Nfasc Neurofascin no no 0 1 0 0 7.5 0.5 1 1 68.691 68.691 2;3 0.00011415 22719 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.279 49.081 0 19.602 36.745 47.426 35.203 38.437 0 19 37 46 37 37 0 1 1 1 1 1 4893.5 2437 20;2354 2378 5774;5775 6669;6670 6670 3 2 AYLTVLADQATPTNR Unmodified 1632.8471 0.84713476 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;Q810U3 Nfasc Neurofascin no no 0 0 0 0 8.5 0.5 1 1 67.412 67.412 2 2.9557E-07 22148 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.99 85.783 49.22 5.9537 18.151 40.452 19 29.848 46 9 19 38 19 28 1 1 1 1 1 1 7118.4 2438 20;2354 2378 5776;5777 6671;6672 6671 2 AYNAEDNEK Unmodified 1052.4411 0.44106794 434 A2A8E2;B7ZC72;B7ZC71;Q8BHG2 0610037L13Rik UPF0587 protein C1orf123 homolog yes no 0 0 0 0 4 0 1 36.671 36.671 2 0.0035285 9983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.15 46.343 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 1452.2 2439 434 2379 5778 6673 6673 1 AYQHCVSTAR Unmodified 1191.5455 0.5454902 909 E9Q4M4;Q91VN4 Chchd6 MICOS complex subunit Mic25 yes no 0 0 0 0 7 0 1 26.581 26.581 3 0.012047 4149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.978 22.18 0 14.657 14.269 0 19.564 9.0357 0 14 14 0 19 9 0 1 1 0 1 1 1463.7 2440 909 2380 5779 6674 6674 1 AYQSLGGPFPK Unmodified 1163.5975 0.597509 1898 Q0VGU4 Vgf yes yes 0 0 0 0 9 0 2 60.948 60.948 2;3 0.00053276 18331 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.64 44.642 108.47 99.885 79.471 165.83 55.136 146.6 102 102 83 157 56 139 2 2 1 2 1 2 9352.1 2441 1898 2381 5780;5781 6675;6676 6676 2 AYSEAHEISK Unmodified 1133.5353 0.53530267 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 7 3.54 1 1 1 1 38.899 38.899 3 0.00068495 10574 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.335 50.15 1362 749.29 1106.2 1512.1 1178.5 1060.1 1279 792 1123 1464 1210 1026 4 3 3 4 3 3 464300 2442 1706 2382 5782;5783;5784;5785 6677;6678;6679;6680 6678 4 AYSEALAAFGNGALFVEK Deamidation (N) 1857.9149 0.91487997 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 1 0 0 8 0 2 88.147 88.147 3;4 2.1526E-05 31892 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.737 51.141 0 19 0 19 0 0 0 19 0 19 0 0 0 1 0 1 0 0 2943.9 2443 974 2383 5786;5787 6681;6682 6681 258 2 AYSSFGGGR Unmodified 900.40898 0.40897995 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 8 0 1 39.473 39.473 2 0.019881 8932 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.156 29.955 59.479 34.129 73.463 95.567 90.597 66.705 56 37 74 93 93 65 1 1 1 1 1 1 5839.5 2444 3333 2384 5788 6683 6683 1 AYTEEDLDLVEK Unmodified 1423.6719 0.67185573 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 3.5 0.5 1 1 66.176 66.176 3 1.2533E-13 24034 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.82 84.562 108.84 54.655 54.919 47.005 0 108.73 102 56 56 46 0 102 2 1 1 1 0 2 12379 2445 2804 2385 5789;5790 6684;6685 6684 2 AYYLACGFCR Unmodified 1279.5478 0.54779839 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 10 0 1 61.751 61.751 2 0.0040783 16861 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.116 64.34 0 0 0 29.933 35.678 48.018 0 0 0 28 37 46 0 0 0 1 1 1 3295.9 2446 2520 2386 5791 6686 6686 1 CAELEEELK Unmodified 1119.5118 0.51179004 905;1106;1107;1656 E9Q452;E9Q454;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 6.67 4.5 1 1 1 57.197 57.197 2;3 0.00014274 20013 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.89 73.572 88.255 89.826 121.04 104.27 0 138.58 83 93 120 102 0 130 1 2 2 2 0 2 19613 2447 905;1106;1107;1656 2387 5792;5793;5794 6687;6688;6689 6687 3 CAFMGSLAPGHVAENLPDVSAK Unmodified 2270.0824 0.082372781 117 A0A0J9YUK6 yes yes 0 0 0 0 6 0 1 53.688 53.688 4 0.0045911 17048 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.379 21.957 118.36 0 124.76 100.58 184.68 122.65 111 0 120 102 185 120 1 0 1 1 1 1 19543 2448 117 2388 5795 6690 6690 1 CANLFEALVGTLK Deamidation (N) 1435.7381 0.73810158 330 A0A1W2P7X0;E9QMV2;Q4KML4 Abracl Costars family protein ABRACL yes no 0 1 0 0 9 0 1 100.8 100.8 3 0.0075113 35909 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.001 32.62 5.365 0 0 5.465 0 9.594 5 0 0 5 0 9 1 0 0 1 0 1 405.49 2449 330 2389 5796 6691 6691 90 1 CANLFEALVGTLK Unmodified 1434.7541 0.754086 330 A0A1W2P7X0;E9QMV2;Q4KML4 Abracl Costars family protein ABRACL yes no 0 0 0 0 11.5 1.12 1 1 1 1 94.858 94.858 3 0.00010862 30771 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.498 49.818 0 0 127.02 19.594 18.867 98.6 0 0 121 19 19 93 0 0 3 1 1 2 8784 2450 330 2389 5797;5798;5799;5800 6692;6693;6694;6695 6693 4 CAQGCVCK Unmodified 981.38304 0.38304125 1301 P02802;CON__P67983;A0A1D5RLN7 Mt1 Metallothionein-1 yes no 0 0 0 0 6 0 1 34.505 34.505 2 0.011135 8071 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.662 68.148 30.044 0 0 30.104 26.577 38.684 28 0 0 28 28 37 1 0 0 1 1 1 1811 + 2451 1301 2390 5801 6696 6696 1 CATILLQGK Unmodified 1002.5532 0.55320134 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 9.29 3.57 1 1 2 2 1 59.842 59.842 2;3 2.0564E-08 15968 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 167.33 102.46 429 595.05 770.26 740.06 811.46 730.74 403 592 771 724 822 698 5 6 6 6 7 5 301460 2452 106 2391 5802;5803;5804;5805;5806;5807;5808 6697;6698;6699;6700;6701;6702;6703;6704;6705 6700 9 CATITPDEAR Unmodified 1132.5183 0.5182724 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 4 0 1 38.831 38.831 2 0.0042859 10995 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.556 47.986 0 0 30.296 0 38.702 0 0 0 28 0 37 0 0 0 1 0 1 0 4409.7 2453 1618 2392 5809 6706 6706 1 CAVLEARDLAPK Unmodified 1341.7075 0.70747015 2245 Q6PFQ7 Rasa4 Ras GTPase-activating protein 4 yes yes 0 0 0 1 9.33 1.25 1 1 1 45.272 45.272 4 0.0023371 9531 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.676 22.717 480.48 369.8 444.89 1194.6 624.97 0 452 385 446 1189 614 0 2 2 1 3 1 0 213120 2454 2245 2393 5810;5811;5812 6707;6708;6709 6709 3 CAVLYCFQCFLYK Unmodified 1770.7932 0.79319039 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 12 0 1 89.973 89.973 3 0.018873 25659 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.502 27.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2455 3387 2394 5813 6710 6710 1 CAVVDVPFGGAK Unmodified 1218.6067 0.60669348 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 64.543 64.543 3 7.974E-05 21345 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.958 60.02 137.07 176.73 77.264 95.03 173.09 193.34 129 176 83 93 176 186 2 2 1 1 2 2 27001 2456 1458 2395 5814;5815;5816 6711;6712;6713 6711 3 CAYEVTQANGK Deamidation (N) 1240.5394 0.53940177 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 1 0 0 7 4.24 2 1 45.387 45.387 3 0.0018352 14118 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.944 50.091 59.808 142.37 89.434 174.24 157.26 39.442 56 139 93 167 158 37 2 3 1 2 2 1 13710 2457 1160 2396 5817;5818;5819 6714;6715;6716 6714 315 3 CCAEANPPACYGTVLAEFQPLVEEPK Unmodified 2949.3347 0.33470066 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 13 0 1 86.207 86.207 4 0.014795 33793 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.384 28.397 39.701 0 30.296 0 48.116 29.848 37 0 28 0 46 28 1 0 1 0 1 1 4059.7 2458 1321 2397 5820 6717;6718 6717 2 CCSGAIIVLTK Unmodified 1220.6257 0.62571436 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 9 0 1 63.709 63.709 2 0.0027641 19689 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.192 45.902 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 2443.2 2459 1609 2398 5821 6719 6719 1 CCSGSLVER Unmodified 1066.4536 0.45356365 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7.33 4.03 1 1 1 35.109 35.109 2 2.3674E-05 9289 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.03 96.972 59.549 54.832 102.18 159.06 124.02 39.442 56 56 102 158 121 37 1 1 2 3 1 1 14170 2460 1321 2399 5822;5823;5824 6720;6721;6722 6720 3 CCTLPEDQR Unmodified 1177.4856 0.48559206 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 5.5 4.39 1 1 1 1 35.706 35.706 2 0.00051238 9535 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.98 87.588 0 88.889 89.704 20.081 112.55 76.738 0 84 84 19 111 75 0 3 2 1 3 3 19972 2461 1321 2400 5825;5826;5827;5828 6723;6724;6725;6726 6725 4 CDAGWLADGSVR Unmodified 1305.5772 0.57718426 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 56.982 56.982 2 6.5364E-08 19382 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.93 87.069 137.67 72.994 93.23 106.04 109.53 174.9 129 74 93 103 112 167 3 2 3 3 3 4 16358 2462 3258 2401 5829;5830;5831;5832 6727;6728;6729;6730 6728 4 CDAISVLEK Unmodified 1033.5114 0.51139611 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 6 0 1 62.96 62.96 3 0.010168 21387 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.567 26.84 49.176 36.052 0 39.778 35.225 48.031 46 37 0 37 37 46 1 1 0 1 1 1 3392.7 2463 2646 2402 5833 6731 6731 1 CDENILWLDYK Deamidation (N) 1468.6544 0.65443153 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8 Pkm Pyruvate kinase PKM yes no 0 1 0 0 4 0 1 82.134 82.134 3 0.017987 31006 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.928 31.677 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1298.9 2464 1609 2403 5834 6732 6732 617 1 CDENILWLDYK Unmodified 1467.6704 0.67041595 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8 Pkm Pyruvate kinase PKM yes no 0 0 0 0 7.75 3.11 1 1 1 1 78.004 78.004 2;3 6.722E-05 29213 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.401 72.522 400.12 356.52 205.53 429.55 409.28 507.48 375 362 204 407 420 484 4 5 4 3 2 4 90362 2465 1609 2403 5835;5836;5837;5838 6733;6734;6735;6736;6737;6738 6733 6 CDFTEDQTAEFK Acetyl (Protein N-term) 1531.6137 0.61368893 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605 Myl6 Myosin light polypeptide 6 yes no 1 0 0 0 4.75 4.82 1 1 1 1 67.614 67.614 2 3.1205E-20 24391 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.06 89.593 89.293 131.24 63.123 68.927 37.773 108.73 84 130 65 66 37 102 2 4 2 3 2 3 51066 2466 316 2404 5839;5840;5841;5842 6739;6740;6741;6742;6743 6740 5 CDMEDER Unmodified 953.32188 0.32188078 1761;1743 P63011;D3YZP5;P62823;A0A286YDR2;Q9CXS2 Rab3a;Rab3c Ras-related protein Rab-3A;Ras-related protein Rab-3C no no 0 0 0 0 13 0 1 29.989 29.989 2 0.041622 6608 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.77 71.29 0 0 40.034 0 38.702 0 0 0 37 0 37 0 0 0 1 0 1 0 4126.2 2467 1761;1743 2406 5843 6744 6744 1 CDPDAAK Unmodified 775.31705 0.3170534 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 2 0 1 31.422 31.422 3 0.057879 7842 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.566 1.2537 19.06 28.193 18.77 0 38.702 0 18 28 19 0 37 0 1 1 1 0 1 0 15640 2468 3085 2407 5844 6745 6745 1 CDVIAQGIVMAVK Unmodified 1402.7312 0.73124206 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9 0 1 77.696 77.696 2 3.5157E-15 26272 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.98 79.193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2469 3397 2408 5845 6746 6746 1 CEASAVPAPDFEWYR Unmodified 1796.7828 0.78281994 13 Q3TYE5;A0A087WP80;Q8BLK3;F6SB80;A0A087WP70 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 5 0 1 71.378 71.378 3 0.00048726 26002 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.128 53.845 39.186 35.786 56.202 45.904 54.471 58.142 37 37 56 46 56 56 1 1 1 1 1 1 6227.6 2470 13 2409 5846 6747 6747 1 CEDELGPR Unmodified 974.41274 0.4127447 2110 Q61137 Astn1 Astrotactin-1 yes yes 0 0 0 0 1 0 1 36.527 36.527 2 0.010591 9717 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.997 67.624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2471 2110 2410 5847 6748 6748 1 CEFQDAYVLLSEK Unmodified 1600.7443 0.74430917 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 80.429 80.429 3 8.7142E-05 28872 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.373 50.076 29.865 253.9 180.98 151.46 203.9 191.39 28 241 185 149 204 185 1 3 3 2 2 3 39925 2472 1766 2411 5848;5849;5850;5851 6749;6750;6751;6752 6751 4 CESQSTLDSGPGEAR Unmodified 1592.6737 0.67366342 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 2.5 0.5 1 1 36.114 36.114 3 1.399E-22 9982 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.28 117.03 0 0 68.262 46.424 46.687 18.922 0 0 65 47 46 19 0 0 2 2 1 1 7926.8 2473 2160 2412 5852;5853 6753;6754 6753 2 CEVQHGIDDSSDAVEVK Unmodified 1886.8316 0.83162063 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 2.5 0.5 1 1 48.474 48.474 3;4 4.2349E-18 15444 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.42 111.05 88.822 0 39.786 20.174 88.132 87.029 83 0 37 19 88 84 2 0 1 1 2 2 10525 2474 2125 2413 5854;5855 6755;6756 6755 2 CFEDSLEQK Unmodified 1154.4914 0.49138895 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 4 0 1 55.451 55.451 3 0.0079471 18830 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.96 28.487 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 2514 2475 2886 2414 5856 6757 6757 1 CFFGASPGR Unmodified 997.44399 0.44398525 1783 P63318 Prkcg Protein kinase C gamma type yes yes 0 0 0 0 9.5 0.5 1 1 52.014 52.014 2 0.005014 12446 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.916 59.993 206.67 103.21 162.61 272.81 89.369 96.588 194 102 158 260 93 93 2 1 1 2 1 1 23801 2476 1783 2415 5857;5858 6758;6759 6759 2 CFIVGADNVGSK Unmodified 1265.6074 0.60742176 1381 P14869;D3YVM5 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 8 0 1 60.286 60.286 2 2.7354E-06 18758 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.16 79.11 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 4627.1 2477 1381 2416 5859 6760 6760 1 CFSEENHEPLR Unmodified 1416.6092 0.60921267 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 3 0 1 38.808 38.808 3 2.3431E-06 11520 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.2 81.353 59.533 43.994 55.999 37.103 0 29.848 56 46 56 37 0 28 1 1 1 1 0 1 4801.3 2478 3174 2417 5860 6761 6761 1 CGGPAPGVR Unmodified 869.41777 0.41777049 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 6 0 1 30.141 30.141 2 0.051664 6063 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.604 37.837 20.319 13.526 0 0 13.962 19.856 19 14 0 0 14 19 1 1 0 0 1 1 1727.1 2479 144 2418 5861 6762 6762 1 CGYAGSNFPEHIFPALVGRPIIR Unmodified 2570.3216 0.32163227 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 1 10 0 1 71.259 71.259 4 0.00037752 21079 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.823 29.363 78.359 61.822 122.9 63.72 0 108.73 74 65 120 65 0 102 1 1 1 1 0 1 7090.6 2480 1690 2419 5862 6763 6763 1 CHELIITK Unmodified 1012.5376 0.53755128 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 7 0 1 46.836 46.836 3 0.019066 13054 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.598 29.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2481 1388 2420 5863 6764 6764 1 CHENAPR Deamidation (N) 883.36065 0.36064955 1244 O70172 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 0 1 0 0 1 0 1 18.667 18.667 3 0.042763 2841 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.917 38.713 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2482 1244 2421 5864 6765 6765 339 1 CHENAPR Unmodified 882.37663 0.37663396 1244 O70172 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes yes 0 0 0 0 2.5 0.5 1 1 15.359 15.359 3 0.0042405 2529 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.2 88.646 3.1919 1.8629 7.3104 3.0469 6.9326 7.2642 3 2 7 3 7 7 1 1 2 1 2 2 1030.4 2483 1244 2421 5865;5866 6766;6767 6766 2 CIALAQLLVEQNFPAIAIHR Unmodified 2276.2463 0.24634206 3379 Q9Z1N5 Ddx39b Spliceosome RNA helicase Ddx39b yes yes 0 0 0 0 11.5 0.5 1 1 90.675 90.675 3 1.1694E-22 29108 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.77 78.298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6966.2 2484 3379 2422 5867;5868 6768;6769 6768 2 CIANPVK Unmodified 800.42146 0.42145889 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 7 0 1 45.966 45.966 2 0.033105 12726 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.801 42.855 59.647 34.597 44.788 58.539 0 39.442 56 37 46 56 0 37 1 1 1 1 0 1 3380.5 2485 2487 2423 5869 6770 6770 1 CIATDTSQYDLWGK Unmodified 1656.7454 0.7453718 2290 Q7TPM9;A0A0U1RQ60 Mtmr10 Myotubularin-related protein 10 yes no 0 0 0 0 9 0 1 82.137 82.137 3 0.027753 28328 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.366 2.0733 99.316 0 79.567 0 74.768 76.75 93 0 74 0 74 74 1 0 1 0 1 1 20717 2486 2290 2424 5870 6771 6771 1 CIAVEPGNQWFVTGSADRTIK Unmodified 2348.1583 0.15831492 777 Q922V4;D3Z4V1;F8WI31 Plrg1 Pleiotropic regulator 1 yes no 0 0 0 1 6 0 1 79.805 79.805 4 0.059433 29380 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.152 14.898 39.701 0 0 39.589 45.317 28.555 37 0 0 37 46 28 1 0 0 1 1 1 2550.1 2487 777 2425 5871 6772 6772 1 CIAYPFNAK Unmodified 1082.5219 0.52190122 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 10 1 1 1 62.158 62.158 2 2.5897E-05 18907 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.04 118.44 0 0 78.498 35.242 27.669 0 0 0 74 37 28 0 0 0 1 1 1 0 4769.3 2488 2301;365;912 2426 5872;5873 6773;6774 6773 2 CIDSGLWVPNSK Unmodified 1374.6602 0.66018561 2107 Q61081 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 0 8 0 1 67.173 67.173 3 0.011105 21993 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.659 32.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2489 2107 2427 5874 6775 6775 1 CIEEAIDK Unmodified 976.45355 0.45354688 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 6.17 3.13 2 2 1 1 54.067 54.067 2;3 0.0025547 17955 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.56 35.658 520.77 583.57 224.47 404.41 567.19 449.93 489 585 223 392 573 436 4 5 2 5 4 3 170920 2490 1383 2428 5875;5876;5877;5878;5879;5880 6776;6777;6778;6779;6780;6781 6781 6 CIELSCGSVR Unmodified 1179.5376 0.53762763 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 8.67 3.09 1 1 1 49.171 49.171 2 0.0012069 14171 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.051 52.727 158.14 87.668 37.139 78.15 147.56 49.036 148 93 37 74 148 46 2 2 1 2 2 1 21548 2491 2253 2429 5881;5882;5883 6782;6783;6784 6783 3 CIELSSGSVK Unmodified 1078.5329 0.53285983 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7 0.816 1 1 1 53.622 53.622 2;3 1.0402E-07 16298 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.55 90.388 207.06 92.56 139.46 290.02 272.91 163.25 194 93 139 277 279 158 3 2 2 3 4 3 84839 2492 106 2430 5884;5885;5886 6785;6786;6787;6788 6787 4 CIENLEELQSLR Unmodified 1502.7399 0.73989249 1995 Q3UM45;A0A087WRA7 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 0 4 0 1 68.768 68.768 3 0.0040549 24800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.726 32.331 20.292 18.848 0 0 38.702 0 19 19 0 0 37 0 1 1 0 0 1 0 1990 2493 1995 2431 5887 6789 6789 1 CIESLIAVFQK Unmodified 1306.6955 0.69550848 1598 P50543 S100a11 Protein S100-A11 yes yes 0 0 0 0 11 0 1 88.476 88.476 3 0.00053827 28241 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.379 57.05 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2866.1 2494 1598 2432 5888 6790 6790 1 CIFLEWDHVEK Unmodified 1474.6915 0.69148574 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 6 0 1 71.166 71.166 3 0.0057011 25330 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.08 31.207 0 0 47.659 47.438 0 0 0 0 46 46 0 0 0 0 1 1 0 0 2337.8 2495 3210 2433 5889 6791 6791 1 CIIEVLSNALSK Unmodified 1345.7275 0.72753689 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 1 0 1 90.738 90.738 2 0.00010907 32272 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.258 58.45 0 0 0 0 13.962 19.856 0 0 0 0 14 19 0 0 0 0 1 1 1078.1 2496 1386 2434 5890 6792 6792 1 CILAQVCK Unmodified 990.49906 0.49905728 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 10 0 1 57.598 57.598 2 0.030317 14853 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.138 25.144 59.523 43.967 57.654 0 86.818 0 56 46 56 0 83 0 1 1 1 0 1 0 23773 2497 547 2435 5891 6793 6793 1 CIPALDSLKPANEDQK Unmodified 1797.8931 0.89309867 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 8 0 1 63.271 63.271 3 0.0055399 20102 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.485 34.716 59.91 35.328 0 40.441 0 39.442 56 37 0 37 0 37 1 1 0 1 0 1 6114.3 2498 1766 2436 5892 6794 6794 1 CIPYAVLLEALALR Unmodified 1600.9011 0.90108458 2997 Q9CZ04;D3Z440;D3YVI6 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 11.7 0.471 1 2 101.52 101.52 2;3 8.1352E-05 28702 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.705 47.852 0 14.657 14.269 19 28.474 23.705 0 14 14 19 28 23 0 2 2 1 2 2 6607 2499 2997 2437 5893;5894;5895 6795;6796;6797;6798 6797 4 CIVVEEGK Unmodified 932.46372 0.46371763 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 5.5 0.5 1 1 49.913 49.913 2 0.010921 15269 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.531 46.184 99.124 69.799 134.8 26.334 44.241 137.32 93 74 130 28 46 130 1 2 2 1 1 2 6813.6 2500 3301 2438 5896;5897 6799;6800 6800 2 CLAFHDISPQAPTHFLVIPK Unmodified 2290.1932 0.19324386 567 B0R1E3;P70349 Hint1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 0 9.5 0.5 2 2 71.856 71.856 4;5 7.4535E-17 23476 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.6 93.276 128.38 159.76 302.71 247.46 240.2 174.63 121 157 296 250 240 167 2 2 3 3 2 2 66707 2501 567 2439 5898;5899;5900;5901 6801;6802;6803;6804 6801 4 CLAQHGR Unmodified 840.40245 0.40245478 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6.5 0.5 1 1 20.323 20.323 3 0.0053749 2994 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.163 65.014 10.675 25.551 19.684 14.209 24.286 34.485 10 25 19 13 24 33 1 2 1 1 1 2 1809.6 2502 1412 2440 5902;5903 6805;6806 6806 2 CLDEFPNLK Unmodified 1134.5379 0.53794521 1584 P48774;E9PVM7;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 9.75 3.27 1 1 2 67.034 67.034 2;3 0.0032776 24446 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.993 40.372 87.989 266.16 238.42 133.1 123.61 146.59 83 259 241 130 121 139 1 3 4 2 2 3 28127 2503 1584 2441 5904;5905;5906;5907 6807;6808;6809;6810 6810 4 CLEDNLGIDKR Unmodified 1331.6503 0.65034921 1544;502 A2APL5;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 1 6 0.816 1 1 1 52.927 52.927 3 2.5827E-08 17408 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.26 70.243 169.09 306.98 112.82 460.35 445.55 299.32 158 301 111 435 456 289 1 3 1 3 3 1 104930 2504 502;1544 2442 5908;5909;5910 6811;6812;6813 6811 3 CLEENNGVDKR Unmodified 1332.6092 0.60921267 1643 P56564 Slc1a3 Excitatory amino acid transporter 1 yes yes 0 0 0 1 4 0 1 36.811 36.811 3 0.0017352 10011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.221 0 39.516 36.703 0 61.208 0 49.036 37 37 0 56 0 46 1 1 0 1 0 1 4967.4 2505 1643 2443 5911 6814 6814 1 CLEEVEDLIVK Unmodified 1345.6799 0.679918 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 81.529 81.529 2;3 5.4043E-08 30899 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.83 72.77 89.527 67.147 70.029 50.325 55.596 98.348 84 65 65 47 56 93 2 2 1 2 2 2 16924 2506 1702 2444 5912;5913;5914;5915 6815;6816;6817;6818 6816 4 CLELAEYLYTIIK Unmodified 1627.8531 0.85313134 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 9.5 0.5 1 1 101.57 101.57 3 0.0007888 36034 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.76 40.155 17.069 0 16.693 11.954 8.8649 0 16 0 16 12 9 0 1 0 1 1 1 0 1584.4 2507 1579 2445 5916;5917 6819;6820 6819 2 CLELFTELAEDKENYK Unmodified 2000.9401 0.94010844 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 6 0 1 81.182 81.182 4 0.0003119 29958 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.472 42.597 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 2806.5 2508 1322 2446 5918 6821 6821 1 CLEQAALVNYSR Unmodified 1422.6925 0.69254837 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YE00;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 6 0 1 57.304 57.304 3 0.014274 18801 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.621 28.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2509 2301;365 2447 5919 6822 6822 1 CLFQSPLFAK Unmodified 1209.6216 0.62161526 683 Q9WVG6;D3YUP1 Carm1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 0 11.5 0.5 1 1 77.717 77.717 3 0.00068704 23653 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.294 44.724 49.011 0 58.26 46.806 0 59.696 46 0 56 46 0 56 1 0 1 1 0 1 2856.9 2510 683 2448 5920;5921 6823;6824 6823 2 CLGELICTLNAANVPAGTEVVCAPPTAYIDFAR Unmodified 3562.7258 0.72584569 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 0 0 0 10 2.16 1 1 1 98.271 98.271 4 1.9386E-05 39506 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.733 34.446 20.292 18.848 9 20.767 0 19 19 19 9 19 0 19 1 1 1 1 0 1 12766 2511 1405 2449 5922;5923;5924 6825;6826;6827 6827 3 CLGNPER Unmodified 844.38614 0.38613602 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 6 0 1 32.823 32.823 2 0.059683 7202 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.975 30.167 60.088 0 0 49.44 44.534 38.171 56 0 0 46 46 37 1 0 0 1 1 1 9511 2512 1596 2450 5925 6828 6828 1 CLGPLVSK Unmodified 872.47897 0.47897377 2264 Q6ZQ38;D3YWC5 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 0 9 0 1 58.329 58.329 2 0.013657 17125 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.833 47.17 0 0 105.24 115.05 0 157.77 0 0 102 111 0 148 0 0 1 1 0 1 7031.8 2513 2264 2451 5926 6829 6829 1 CLIAEVWCPVTDLDSIQFALR Unmodified 2505.2396 0.2396017 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9.33 2.62 1 1 1 103.57 103.57 3 1.0354E-05 36265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.909 38.981 0 5.32 0 5.3319 7.0771 0 0 5 0 5 7 0 0 1 0 1 1 0 2385.4 2514 1151 2452 5927;5928;5929 6830;6831;6832;6833 6831 4 CLIEILASR Unmodified 1073.5903 0.59031513 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 10 0 1 75.014 75.014 2 0.004761 22617 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.744 55.008 48.574 44.089 94.468 73.357 100.71 76.01 46 46 93 74 102 74 1 1 1 1 1 1 11969 2515 1050;1380 2453 5930 6834 6834 1 CLKDEDPYVR Unmodified 1293.6023 0.60233638 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 1 5.5 0.5 1 1 46.594 46.594 3 0.018258 13693 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.174 41.376 216.66 198.99 206.93 235.76 291.29 96.513 204 204 213 232 292 93 2 2 2 2 2 1 20711 2516 1203;3123 2454 5931;5932 6835;6836 6836 2 CLLPEGASELR Unmodified 1243.6231 0.62307182 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 5 0 1 59.371 59.371 2 0.038131 20427 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.528 17.717 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 2136.9 2517 2686 2455 5933 6837 6837 1 CLNACSGR Unmodified 936.39057 0.39056947 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6 0 1 30.674 30.674 2 0.0064022 6301 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.01 74.12 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 2796.8 2518 2479 2456 5934 6838 6838 1 CLPQIQLYGPTNVAPIINR Unmodified 2166.1619 0.16194373 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 10.7 1.7 1 1 1 80.317 80.317 3 6.7581E-08 25173 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.404 67.285 28 29.792 0 59.607 85.126 0 28 28 0 56 84 0 1 1 0 2 2 0 36438 2519 3371 2457 5935;5936;5937 6839;6840;6841 6840 3 CLQILAAGLFLPGSVGITDPCESGNFR Unmodified 2891.431 0.4309843 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 12 0 1 100.11 100.11 4 0.055413 28455 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 23.054 16.331 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 666.02 2520 2991 2458 5938 6842 6842 1 CLVLTGFGGYDK Unmodified 1328.6435 0.64347291 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 9 0 1 73.184 73.184 3 0.016256 24092 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.382 24.111 49.121 0 39.786 0 56.948 47.411 46 0 37 0 56 46 1 0 1 0 1 1 5562.7 2521 2162 2459 5939 6843 6843 1 CLYASVLTAQPR Unmodified 1377.7075 0.70747015 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 10 0 1 62.072 62.072 2 2.2235E-14 16969 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.28 103.14 88.273 41.195 97.168 109.3 40.63 34.112 83 42 97 106 42 32 2 1 2 2 1 1 15861 2522 1652 2460 5940 6844;6845 6845 2 CLYVFPAK Unmodified 996.51027 0.5102739 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 10.5 0.5 1 1 66.985 66.985 2 0.0062869 18633 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.086 33.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2523 2262 2461 5941;5942 6846;6847 6847 2 CMALSTAILVGEAK Unmodified 1462.7524 0.75237144 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 9 0 1 76.174 76.174 3 0.00025258 25539 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.83 51.021 60.088 0 0 20.767 0 0 56 0 0 19 0 0 1 0 0 1 0 0 3046.4 2524 3170 2462 5943 6848 6848 1 CMPTFQFYK Unmodified 1220.5358 0.53583672 1346 P10639 Txn Thioredoxin yes yes 0 0 0 0 10.5 0.5 1 1 71.284 71.284 2 0.0023912 21228 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.645 59.905 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 5610.8 2525 1346 2463 5944;5945 6849;6850 6849 2 CNAHYNLQNAFNLAEK Deamidation (N) 1906.8632 0.86319553 2186 Q68FG2 Sptbn2 yes yes 0 1 0 0 7 0 1 62.036 62.036 3 0.0089761 20213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.454 34.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2526 2186 2464 5946 6851 6851 877 1 CNEIISWLDK Unmodified 1276.6122 0.61217279 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.75 2.49 2 1 1 78.953 78.953 2;3 3.6126E-05 27487 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.353 65.15 226.72 187.95 190.38 264.3 395.55 220.57 213 194 194 259 397 213 3 4 3 4 4 2 64683 2527 1762 2465 5947;5948;5949;5950 6852;6853;6854;6855 6854 4 CNEPAVWSQLAK Unmodified 1401.6711 0.67108465 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.4 2.42 1 1 2 1 64.609 64.609 2;3 2.0236E-11 20754 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.98 87.317 195.58 107.58 276.14 167.95 120.38 97.607 184 112 269 168 121 93 4 3 5 4 3 2 41038 2528 2185 2466 5951;5952;5953;5954;5955 6856;6857;6858;6859;6860;6861 6860 6 CNEQPNR Unmodified 916.38211 0.38211327 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 2 0 1 18.93 18.93 2 0.044814 2938 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.923 68.335 0 0 5.9282 12.656 5.6947 0 0 0 6 12 6 0 0 0 1 1 1 0 1128.8 2529 2282;2057 2467 5956 6862 6862 1 CNSLEEIK Unmodified 991.46445 0.46444592 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4.5 0.5 1 1 50.66 50.66 2;3 0.012936 16299 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.136 25.936 29.872 115.81 165.9 273.14 61.384 166.68 28 111 167 260 65 158 1 1 2 3 1 2 13873 2530 551 2468 5957;5958 6863;6864;6865 6865 3 CNTPTYCDLGK Acetyl (Protein N-term) 1369.5642 0.56423631 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 1 0 0 0 7.33 4.03 1 1 1 57.523 57.523 2 1.4347E-07 19927 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.12 94.501 0 86.446 111.65 73.387 44.715 47.76 0 83 111 74 46 46 0 2 2 2 1 2 18439 2531 1141 2469 5959;5960;5961 6866;6867;6868 6866 3 CNTQQPGCENVCYDK Unmodified 1871.7237 0.72366686 1439 P23242 Gja1 Gap junction alpha-1 protein yes yes 0 0 0 0 4 0 1 43.467 43.467 3 0.019564 13192 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.143 29.086 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 1947.2 2532 1439 2470 5962 6869 6869 1 CPALYWLSGLTCTEQNFISK Unmodified 2387.129 0.12898862 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43;H3BJC6 Esd S-formylglutathione hydrolase yes no 0 0 0 0 11.8 0.748 2 2 1 98.914 98.914 3;4 3.626E-11 28199 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.5 87.912 39.521 39.073 86.07 22.814 29.288 66.848 37 38 83 23 28 65 2 2 4 1 1 2 22406 2533 1122 2471 5963;5964;5965;5966;5967 6870;6871;6872;6873;6874;6875 6874 6 CPEALFQPSFLGMESCGIHETTFNSIMK Unmodified 3230.4545 0.45449822 1673;1781 P60710;E9Q1F2;F8WGM8;P63260 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 8 1 1 1 86.614 86.614 4 0.0018532 30279 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 34.125 28.405 0 20.216 0 30.604 19.197 49.554 0 19 0 28 19 47 0 1 0 1 1 2 4885.5 2534 1673;1781 2472 5968;5969 6876;6877 6877 2 CPLLKPWALTFSYGR Unmodified 1807.9443 0.94434638 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 13 0 1 80.38 80.38 3 4.2614E-05 30969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.39 84.555 168.28 0 210.14 0 0 127.92 158 0 195 0 0 120 1 0 1 0 0 1 29786 2535 1309 2473 5970 6878 6878 1 CPLPRPWALTFSYGR Unmodified 1819.9192 0.91919426 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 1 6.5 5.5 1 1 71.336 71.336 3 9.539E-05 18172 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.865 77.042 78.662 82.232 110.07 105.5 178.31 27.397 74 84 111 102 176 28 1 2 2 1 2 1 21110 2536 1308 2474 5971;5972 6879;6880 6880 2 CPNCGTHYK Unmodified 1135.4539 0.453898 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 0 8.5 2.69 1 1 1 1 30.997 30.997 3 0.00018307 5892 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.47 85.58 349.19 248.87 252.5 198.2 165.83 156.13 328 260 250 189 163 148 4 4 3 2 2 2 52341 2537 1417 2475 5973;5974;5975;5976 6881;6882;6883;6884 6882 4 CPNPEEGESVLELSLR Unmodified 1827.8673 0.86727785 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 3 0 1 70.508 70.508 3 0.0042069 26090 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.998 24.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2538 2513 2476 5977 6885 6885 1 CPTDCSSR Unmodified 981.36441 0.3644143 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6.67 4.5 1 1 1 23.255 23.255 2 0.0043048 4272 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.74 91.954 19.957 32.573 71.391 27.199 0 29.848 19 33 69 28 0 28 1 2 2 1 0 1 11404 2539 2479 2477 5978;5979;5980 6886;6887;6888 6886 3 CPTDELSLSNCAVVNEK Deamidation (N) 1935.8554 0.85539254 1554 P46460;G3UX98 Nsf Vesicle-fusing ATPase yes no 0 1 0 0 3.5 0.5 1 1 66.408 66.408 3 0.0007024 24168 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.33 41.29 29.673 27.134 39.338 20.767 0 49.036 28 28 38 19 0 46 1 1 1 1 0 1 7368.7 2540 1554 2478 5981;5982 6889;6890 6889 583 2 CPTDELSLSNCAVVNEK Unmodified 1934.8714 0.87137695 1554 P46460;G3UX98 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 7.33 4.03 1 1 1 63.024 63.024 3 6.4111E-18 22370 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.91 102.87 69.42 93.706 33.809 116.32 158.97 27.73 65 93 34 111 158 28 2 3 1 3 3 1 33155 2541 1554 2478 5983;5984;5985 6891;6892;6893 6891 3 CQEIQNGSESEVSASQR Deamidation (N) 1908.8119 0.81194782 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 1 0 0 1 0 1 39.168 39.168 3 8.4788E-12 10836 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 117.3 91.473 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 3067.7 2542 2983 2479 5986 6894 6894 1036 1 CQQEGLVPEGSADEER Unmodified 1802.7741 0.77410575 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 1 0 1 44.191 44.191 3 0.00027313 12659 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.462 50.344 20.387 0 0 0 28.291 29.041 19 0 0 0 28 28 1 0 0 0 1 1 3291.1 2543 2319 2480 5987 6895 6895 1 CQSGTVR Unmodified 806.37049 0.37048595 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 4 0 1 19.649 19.649 2 0.027113 2801 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.064 30.416 0 0 12.984 0 26.15 0 0 0 12 0 25 0 0 0 1 0 1 0 2434.3 2544 927 2481 5988 6896 6896 1 CQYVTEK Unmodified 926.41677 0.41676744 1309;1308 P05063;P05064;A6ZI44;D3YWI1 Aldoc;Aldoa Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 0 7.75 3.11 1 1 1 1 41.471 41.471 2 0.0056192 10635 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.55 85.375 1365.4 1312.2 967.3 1060.9 1249 1601.7 1284 1335 980 1042 1267 1536 4 4 2 3 3 4 175030 2545 1308;1309 2482 5989;5990;5991;5992 6897;6898;6899;6900 6899 4 CSCCEMNVHR Unmodified 1351.489 0.48897966 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 4 0 1 28.924 28.924 3 0.0025288 6395 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.303 46.413 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 1377.7 2546 1783 2483 5993 6901 6901 1 CSDFTEEICR Unmodified 1315.5173 0.51728612 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 5.5 4.39 1 1 1 1 51.463 51.463 2;3 3.1277E-05 17403 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.86 103.86 118.53 33.568 67.967 41.534 104.41 103.31 111 37 65 38 102 102 2 1 1 1 1 2 31272 2547 307 2484 5994;5995;5996;5997 6902;6903;6904;6905 6903 4 CSELEEELK Unmodified 1135.5067 0.50670466 782;926;209 P21107;A0A0R4J1P2;D3Z6I8;E9Q7Q3 Tpm3 Tropomyosin alpha-3 chain no no 0 0 0 0 2.5 0.5 1 1 56.304 56.304 2;3 0.0025923 19669 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.349 36.628 39.462 55.978 56.537 65.541 113.5 18.638 37 56 57 65 112 19 1 2 2 3 3 1 12316 2548 209;782;926 2485 5998;5999 6906;6907;6908 6908 3 CSLNPEWNETFR Unmodified 1551.6776 0.67762659 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 6 0 1 61.675 61.675 2 0.0010108 20886 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.488 37.965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2549 1796 2486 6000 6909 6909 1 CSPTEAAVR Unmodified 989.46003 0.46002924 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 32.312 32.312 2 0.0016902 7870 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.136 83.474 19.879 57.634 73.443 68.842 0 29.848 19 56 74 65 0 28 1 1 2 1 0 1 12766 2550 3258 2487 6001;6002 6910;6911 6911 2 CSSILLHGK Unmodified 1013.5328 0.53280025 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 9 0 1 45.649 45.649 3 0.00087847 11163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.67 61.453 0 269.65 290.69 300.79 287.95 380.87 0 258 296 296 301 365 0 1 1 1 1 1 16827 2551 2699 2488 6003 6912 6912 1 CSTILVQGK Unmodified 1004.5325 0.5324659 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 8.33 0.471 2 1 50.925 50.925 2;3 0.00066761 14318 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.709 57.066 178.16 138.32 173.47 226.46 368.81 257.88 167 130 166 223 371 250 2 1 2 3 3 2 32025 2552 2253 2489 6004;6005;6006 6913;6914;6915 6914 3 CSTPEEIK Unmodified 962.4379 0.43789681 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 4.5 0.5 1 1 41.859 41.859 2 0.0082622 12402 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.476 40.34 39.389 16.924 38.02 17.966 28.463 0 37 19 37 19 28 0 1 1 1 1 1 0 2143.7 2553 3301 2490 6007;6008 6916;6917 6916 2 CSWLVVQCLLR Unmodified 1432.7319 0.73191077 2789 Q920E5;A0A0G2JE82 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 12 0 1 84.109 84.109 3 0.00058957 23322 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.944 36.31 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 1867.3 2554 2789 2491 6009 6918 6918 1 CSYDEHAK Unmodified 1008.3971 0.39709463 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 4 0 1 30.311 30.311 3 0.0004965 7022 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.68 92.958 147.56 191.53 104.28 80.481 213.87 0 139 191 111 83 208 0 1 1 1 1 1 0 10324 2555 1321 2492 6010 6919 6919 1 CTELNQAWTSLGK Unmodified 1506.7137 0.71367774 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 0.5 1 1 68.615 68.615 3 0.00011115 22694 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.087 61.546 59.286 287.94 230.52 65.727 53.229 318.54 56 278 232 65 56 306 1 2 2 1 1 3 19680 2556 551 2493 6011;6012 6920;6921;6922 6920 3 CTESEEEEVTK Unmodified 1339.5449 0.54494066 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 1 0 1 40.774 40.774 3 0.00020182 11422 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.403 67.172 0 48.944 0 71.045 0 59.696 0 46 0 65 0 56 0 1 0 1 0 1 12289 2557 853 2494 6013 6923 6923 1 CTLDPETSEPTDSLTEQAVEFCQR Unmodified 2812.2168 0.21675359 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 3 0 1 70.473 70.473 3 4.3431E-07 26074 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.516 55.55 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1961.9 2558 2890 2495 6014 6924 6924 1 CTLPLTGK Unmodified 888.47389 0.47388839 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 8.5 0.5 1 1 53.91 53.91 2 0.0080957 14902 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.74 75.565 88.692 161.07 0 0 0 108.73 83 157 0 0 0 102 1 2 0 0 0 1 18729 2559 3028 2496 6015;6016 6925;6926 6926 2 CTQDDINQAR Unmodified 1219.5251 0.52514869 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 2 0 1 31.157 31.157 2 0.0073581 7588 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.399 54.959 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 1449 2560 2095 2497 6017 6927 6927 1 CTTDHISAAGPWLK Unmodified 1555.7453 0.74531222 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 56.787 56.787 3 5.1459E-09 17015 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.756 65.505 107.66 100.7 34.18 137.87 116.25 116.07 101 102 37 130 121 112 2 2 1 2 2 2 22301 2561 2843 2498 6018;6019;6020 6928;6929;6930 6930 3 CTVLTEAK Unmodified 920.46372 0.46371763 3431 yes no 0 0 0 0 13 0 1 58.957 58.957 2 0.029218 20651 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.789 29.763 177.09 152.43 223.67 0 208.15 0 167 158 216 0 199 0 1 1 1 0 1 0 12192 + 2562 3431 2499 6021 6931 6931 1 CTVSFLLSEDGSGK Unmodified 1498.6974 0.69735898 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7 0 2 70.553 70.553 2;3 7.1532E-25 24213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.42 108.89 78.441 81.476 92.499 63.82 91.031 96.54 74 83 93 65 93 93 1 1 1 1 1 1 16734 2563 1055 2500 6022;6023 6932;6933 6933 2 CVAALAR Unmodified 759.40614 0.40614318 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 8 0 1 40.619 40.619 2 0.038071 9474 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.833 27.559 126.74 135.58 225.26 114.19 188.59 142.79 120 139 221 120 190 139 1 1 1 1 1 1 17822 2564 852 2501 6024 6934 6934 1 CVDMVISELISTVR Unmodified 1620.8215 0.82151363 1534 P39053 Dnm1 Dynamin-1 yes yes 0 0 0 0 8.5 0.5 1 1 98.078 98.078 3 5.8066E-05 35072 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.462 60.075 0 9.576 0 0 4.7221 23.789 0 9 0 0 5 23 0 1 0 0 1 2 4762.5 2565 1534 2502 6025;6026 6935;6936 6936 2 CVDMVVSELTSTIR Unmodified 1608.7851 0.78512813 118 A0A0J9YUN4 yes yes 0 0 0 0 7 0.816 1 1 1 84.404 84.404 3 1.842E-07 30689 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.12 87.998 29.616 47.19 68.771 40.361 0 29.848 28 47 66 38 0 28 1 2 2 2 0 1 19186 2566 118 2503 6027;6028;6029 6937;6938;6939;6940 6938 4 CVEDPETGLR Unmodified 1174.5288 0.52883709 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0 1 44.741 44.741 2 0.0024765 13830 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.744 51.572 39.286 26.35 47.43 36.918 37.006 0 37 28 47 37 37 0 1 1 1 1 1 0 5614.2 2567 3266 2504 6030 6941 6941 1 CVELVHEEMQR Unmodified 1428.649 0.648969 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 4 0 1 46.155 46.155 3 0.0028589 14429 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.674 40.81 40.589 36.631 0 40.29 66.139 0 38 37 0 38 65 0 1 1 0 1 1 0 3936.7 2568 815;2590 2505 6031 6942 6942 1 CVFNGNAGACR Deamidation (N) 1225.4968 0.49682545 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 0 1 0 0 6 0 1 43.432 43.432 2 0.04715 12306 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.248 52.919 9.477 0 30.248 0 0 29.848 9 0 28 0 0 28 1 0 1 0 0 1 2086.4 2569 2638 2506 6032 6943 6943 960 1 CVGNYDNR Unmodified 996.40833 0.40832802 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 7.33 4.03 1 1 1 32.508 32.508 2 0.0062585 7680 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.55 59.365 20.265 0 59.269 27.409 46.857 20.254 19 0 56 28 46 19 1 0 2 1 1 1 5409.9 2570 1495 2507 6033;6034;6035 6944;6945;6946 6946 3 CVGVGESDGSIWNPDGIDPK Unmodified 2100.9422 0.94223371 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 0 8.5 4.5 1 1 72.004 72.004 3 5.5411E-11 26289 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.572 85.906 59.491 39.368 100.33 30.256 115.76 0 56 37 93 28 112 0 1 1 1 1 2 0 25328 2571 1458 2508 6036;6037 6947;6948 6947 2 CVIALQEGDVDTLDR Unmodified 1702.8196 0.81959938 799 E0CXB9;Q61301;A0A0N4SUZ7 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 4.5 0.5 1 1 65.887 65.887 3 0.00048304 23550 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.377 31.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2572 799 2509 6038;6039 6949;6950 6949 2 CVLNFKPCGLFGK Unmodified 1538.7738 0.77377558 2021 Q3V156;Q91XL9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 1 12 0 1 73.137 73.137 4 0.0030315 18919 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.776 39.638 0 0 47.659 47.438 0 59.696 0 0 46 46 0 56 0 0 1 1 0 1 2559.4 2573 2021 2510 6040 6951 6951 1 CVNTTLQIK Unmodified 1075.5696 0.56957969 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 54.791 54.791 2 0.014352 15400 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.1 20.06 49.248 29.792 18.523 79.527 71.441 67.251 46 28 19 75 74 65 1 1 1 2 2 2 9134.9 2574 1536 2511 6041;6042 6952;6953 6953 2 CVNYEEKNLK Deamidation (N) 1296.602 0.60200203 1026 F7D4T4;Q7TPQ3 Shprh E3 ubiquitin-protein ligase SHPRH yes no 0 1 0 1 13 0 1 29.288 29.288 4 0.0086282 6316 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.04 33.213 49.128 45.631 0 0 0 108.73 46 46 0 0 0 102 1 1 0 0 0 1 2705.8 2575 1026 2512 6043 6954 6954 270 1 CVQSNIVLLTQAFR Deamidation (N) 1648.8607 0.86067633 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 1 0 0 1 0 1 80.565 80.565 3 0.01654 28046 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.33 19.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2576 789 2513 6044 6955 6955 207 1 CVQSNIVLLTQAFR Unmodified 1647.8767 0.87666075 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 80.2 80.2 2;3 0.023034 24676 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.237 20.633 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 2766.5 2577 789 2513 6045;6046 6956;6957 6956 2 CVSTLLDLIQTK Unmodified 1389.7538 0.75375164 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 10.5 1.12 1 1 1 1 87.87 87.87 2;3 1.7649E-14 28330 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.96 100.37 0 20.216 0 80.042 92.773 107.46 0 19 0 74 92 102 0 1 0 2 2 2 13860 2578 1203;3123 2514 6047;6048;6049;6050 6958;6959;6960;6961 6959 4 CVVTAEDGTQSEATVNVK Unmodified 1906.8942 0.89422088 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 4 0 1 53.29 53.29 3 8.8983E-05 17971 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.525 38.202 0 0 39.701 7.4708 0 0 0 0 37 9 0 0 0 0 1 1 0 0 3386.2 2579 71;74;949;1367 2515 6051 6962 6962 1 CVVVGDGAVGK Unmodified 1059.5383 0.53827956 1676;1759;1675;1837 Q3TLP8;P63001;Q05144;A0A2R8VH29;G3UZM2;D3Z3L1;F2Z463;D3YX61;Q8R527;Q9ER71;P60766;P84096;A0A1B0GSL4;P60764 Rac1;Rac2;Rhoj;Rhoq;Cdc42;Rhog;Rac3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Rho-related GTP-binding protein RhoQ;Rho-related GTP-binding protein RhoJ;Cell division control protein 42 homolog;Rho-related GTP-binding protein RhoG;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 0 6.75 0.829 2 1 1 51.173 51.173 2;3 4.7141E-10 15053 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.66 81.061 156.99 137.78 231.79 204.06 270.77 157.52 148 140 231 204 273 153 3 3 4 4 4 3 35699 2580 1759;1676;1837;1675 2516 6052;6053;6054;6055 6963;6964;6965;6966 6965 4 CYEMASHLR Unmodified 1165.5008 0.5008482 1758;652 P62962;CON__P02584 Pfn1 Profilin-1 no no 0 0 0 0 6.5 0.5 1 1 39.707 39.707 3 0.0012121 10526 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.099 60.865 59.711 103.52 58.864 59.118 111.12 115.16 56 102 56 56 111 111 1 2 1 1 1 2 6259.2 + 2581 1758;652 2517 6056;6057 6967;6968 6967 2 CYFFLNAFVDTAQK Unmodified 1722.8076 0.80757813 2626 Q8R016;E9PZH4;E9PYU0;E9QA53 Blmh Bleomycin hydrolase yes no 0 0 0 0 10 0 1 89.595 89.595 3 0.0013885 28993 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.956 38.523 29.987 0 9.5868 0 0 29.848 28 0 9 0 0 28 1 0 1 0 0 1 2536.8 2582 2626 2518 6058 6969 6969 1 CYTQNIDTLER Unmodified 1411.6402 0.64017845 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 4.5 0.5 1 1 51.155 51.155 2;3 0.0017851 16553 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.31 68.739 39.157 0 38.695 27.771 28.012 0 38 0 37 28 28 0 2 0 1 1 1 0 6616.3 2583 2702 2519 6059;6060 6970;6971 6971 2 DAAAEVPSR Unmodified 914.44576 0.44575938 1455 P26339 Chga Chromogranin-A;Pancreastatin;Beta-granin;WE-14;Catestatin;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 0 0 2.5 0.5 1 1 34.273 34.273 2;3 0.02249 9434 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.823 32.403 0 0 8.8681 19.527 37.805 0 0 0 9 19 37 0 0 0 1 1 1 0 2446.3 2584 1455 2520 6061;6062 6972;6973 6973 2 DAAAEYDELAEPQDFQDDPDIVAFR Unmodified 2839.2461 0.24606311 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 1.75 0.829 2 1 1 82.278 82.278 3;4 1.1204E-31 30775 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.54 84.687 11.575 0 38.238 39.255 5.23 39.442 11 0 37 38 5 37 2 0 1 1 1 1 10026 2585 2520 2521 6063;6064;6065;6066 6974;6975;6976;6977;6978 6978 5 DAADGEAK Unmodified 775.33481 0.33481195 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 4.8 4.17 2 1 1 1 31.37 31.37 2;3 0.0053532 7980 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.931 31.952 169.65 139.2 89.506 59.963 598.24 223.83 159 134 83 56 581 222 5 3 2 2 5 3 139430 2586 2769 2522 6067;6068;6069;6070;6071 6979;6980;6981;6982;6983;6984 6981 6 DAADGEAKAEEK Unmodified 1232.5521 0.55207495 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 4.8 4.17 2 1 1 1 38.856 38.856 3;4 0.00023644 11625 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.262 54.273 702.56 1025 1082.8 842.19 1032.5 958.32 664 1023 1086 844 1034 912 4 4 3 4 3 4 81342 2587 2769 2523 6072;6073;6074;6075;6076 6985;6986;6987;6988;6989 6986 5 DAAEEDER Unmodified 933.36757 0.36756864 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 13 0 1 23.21 23.21 2 0.028422 3575 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.26 30.014 0 0 15.148 0 14.644 0 0 0 14 0 14 0 0 0 1 0 1 0 1134 2588 1275 2524 6077 6990 6990 1 DAAGLESQLQDTQELLQEETR Unmodified 2373.1296 0.12957679 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 5.2 3.97 1 1 2 1 80.873 80.873 3;4 3.0183E-11 30311 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.457 83.865 0 18.576 25.095 19.594 5.0519 25.44 0 18 24 19 5 24 0 2 2 1 1 2 12613 2589 1974 2525 6078;6079;6080;6081;6082 6991;6992;6993;6994;6995;6996 6993 6 DAAKPVIELYK Unmodified 1245.6969 0.69688869 3338 Q9WUR9;F6TEU8 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 1 7 0 1 61.206 61.206 3 0.0024913 19841 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.261 45.656 78.69 0 119.71 0 75.098 67.147 74 0 111 0 74 65 1 0 1 0 1 1 8011.3 2590 3338 2526 6083 6997 6997 1 DAALATALGDKK Unmodified 1172.6401 0.6401021 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 1 7.5 0.5 1 1 56.98 56.98 3 0.0071737 17858 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.869 30.496 256.1 136.36 302.71 181.51 140.99 138.58 241 139 296 185 139 130 2 1 2 2 1 1 13143 2591 1379 2527 6084;6085 6998;6999 6998 2 DAALMVTNDGATILK Unmodified 1531.7916 0.79159371 1823 P80314;A0A1W2P7B7;A0A1W2P828;A0A1W2P6Q3;A0A1W2P871 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 5.5 0.5 1 1 71.699 71.699 3 0.0037217 26153 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.532 17.473 39.468 84.556 65.481 57.305 37.384 38.375 37 83 65 56 37 37 1 2 1 1 1 1 7897 2592 1823 2528 6086;6087 7000;7001 7000 2 DAANLLNDALAIR Unmodified 1368.7361 0.73612775 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447 Klc1 Kinesin light chain 1 yes no 0 0 0 0 7 0 1 79.521 79.521 2 0.00038292 28413 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.705 45.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2593 923 2529 6088 7002 7002 1 DAAPSALAK Unmodified 842.44978 0.44978213 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 7 2.77 2 2 1 1 45.266 45.266 2;3 0.0008403 13711 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.308 20.686 657.08 669.62 940.73 640.49 680.46 984.75 620 672 936 649 711 942 5 5 6 6 6 6 71712 2594 3371 2530 6089;6090;6091;6092;6093;6094 7003;7004;7005;7006;7007;7008 7003 6 DAAQERPSGPGGR Unmodified 1296.6171 0.61707524 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 1 6 4.97 1 1 1 24.372 24.372 3 0.00038519 4736 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.698 39.944 60.088 29.315 48.233 67.837 108.12 49.729 56 28 47 65 107 47 1 1 2 2 2 2 15129 2595 1901 2531 6095;6096;6097 7009;7010;7011 7009 3 DAAQSSPAFGDR Unmodified 1220.5422 0.54217896 1343 P10518 Alad Delta-aminolevulinic acid dehydratase yes yes 0 0 0 0 3.5 0.5 1 1 38.881 38.881 2 0.00023999 11028 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.387 49.178 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2596 1343 2532 6098;6099 7012;7013 7013 2 DAAQSSPAFGDRR Unmodified 1376.6433 0.64328999 1343 P10518 Alad Delta-aminolevulinic acid dehydratase yes yes 0 0 0 1 4 0 1 32.672 32.672 3 0.0058487 8073 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.116 36.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2597 1343 2533 6100 7014 7014 1 DAASGEEIGK Unmodified 975.4509 0.45090434 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 3.5 0.5 1 1 41.73 41.73 2 8.8169E-09 12367 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.86 83.592 78.657 62.65 72.124 85.038 73.498 0 74 65 74 83 74 0 1 1 1 1 1 0 7018.6 2598 145 2534 6101;6102 7015;7016 7016 2 DAASNEIPTLTK Unmodified 1258.6405 0.64049603 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 5 0 1 58.023 58.023 3 0.0002227 19787 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.241 49.683 69.191 43.335 56.43 27.241 0 0 65 46 56 28 0 0 1 1 1 1 0 0 8465.8 2599 2886 2535 6103 7017 7017 1 DAASVDK Unmodified 704.33408 0.33408367 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 4 0 1 36.14 36.14 2 0.033776 9688 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.265 29.06 78.731 133.01 0 151.93 0 0 74 130 0 139 0 0 1 1 0 1 0 0 8351.6 2600 668;3370 2536 6104 7018 7018 1 DACEPESGPDPSTVR Unmodified 1615.6784 0.67841445 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 1 0 1 39.419 39.419 3 0.012767 10978 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.962 35.533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2601 1275 2537 6105 7019 7019 1 DACFTSLMNTLMTSLPSLVQQQGR Unmodified 2697.2924 0.29244191 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 9.8 4.45 1 1 2 1 109.34 109.34 3;4 4.9578E-28 34800 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.45 116.28 0 3 9.3245 14.281 0 0 0 3 9 14 0 0 0 1 1 2 0 0 10327 2602 3355 2538 6106;6107;6108;6109;6110 7020;7021;7022;7023;7024 7020 5 DADETKEWIEEK Unmodified 1491.6729 0.67291837 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6.25 3.96 1 1 1 1 61.029 61.029 3 7.4101E-08 21298 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.29 55.695 517.97 682.35 986.79 753.85 528.56 535.65 489 681 980 732 539 509 3 3 4 4 3 2 109040 2603 551 2539 6111;6112;6113;6114 7025;7026;7027;7028;7029 7029 5 DADIGVAEAER Unmodified 1144.536 0.53603095 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 3.83 4.14 1 3 1 1 44.881 44.881 2;3 7.436E-14 12959 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 156.57 111.55 247.34 98.17 371.65 265.18 251.03 264.7 232 102 361 261 250 251 4 3 6 4 3 4 73004 2604 2059 2540 6115;6116;6117;6118;6119;6120 7030;7031;7032;7033;7034;7035;7036 7030 7 DADSIHQYLLQR Unmodified 1457.7263 0.72629134 1899 Q11011;F6QYF8 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 5.5 0.5 1 1 54.458 54.458 3 6.0777E-06 18113 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.734 49.294 38.869 84.727 121.31 73.002 34.553 107.75 37 84 120 74 37 102 1 2 2 2 1 2 13449 2605 1899 2541 6121;6122 7037;7038 7037 2 DADSQNPDAPEGK Unmodified 1342.5637 0.56370227 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 1.5 0.5 1 1 36.579 36.579 3 0.00011302 9716 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.669 61.939 29.857 42.542 7.9287 0 0 63.96 28 42 9 0 0 60 1 2 1 0 0 2 6251.5 2606 1043 2542 6123;6124 7039;7040 7039 2 DAEASNVLVGEVDFLDTPFIAFVR Unmodified 2623.317 0.31698363 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 6 0 2 109.26 109.26 3;4 8.4731E-17 38046 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.923 90.174 5.327 0 6.3795 1.9229 4.0264 2.0171 5 0 6 2 4 2 2 0 2 1 1 1 1551.4 2607 935 2543 6125;6126 7041;7042 7041 2 DAEATHTSSR Unmodified 1073.4738 0.47376505 548 A2TJV2 Palm3 Paralemmin-3 yes yes 0 0 0 0 2 0 1 16.426 16.426 3 0.00053355 2600 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.687 54.123 0 2.0939 2.0384 0 5.1618 1.9847 0 2 2 0 5 2 0 1 1 0 1 1 348.85 2608 548 2544 6127 7043 7043 1 DAEAWFNEK Unmodified 1108.4825 0.48253882 659 CON__P13645;CON__Q7Z3Y8;CON__Q7Z3Y7;CON__Q148H6;CON__Q7Z3Z0 yes no 0 0 0 0 7.2 2.99 2 1 1 1 64.375 64.375 2;3 0.00035001 22634 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.033 70.02 168.67 55.551 156.27 158.31 269.81 94.653 158 56 149 158 268 92 3 1 3 4 4 2 27174 + 2609 659 2545 6128;6129;6130;6131;6132 7044;7045;7046;7047;7048 7044 5 DAEDAMDAMDGAVLDGR Unmodified 1750.7138 0.71381368 2145 Q62093 Srsf2 Serine/arginine-rich splicing factor 2 yes yes 0 0 0 0 2 0 1 72.395 72.395 3 0.0079822 26201 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 40.614 35.535 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 4684.7 2610 2145 2546 6133 7049 7049 1 DAEDAVYGR Unmodified 994.43559 0.43558863 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 2 0.816 1 1 1 39.383 39.383 2 0.00010934 11583 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 132.76 100.01 39.147 95.398 94.746 76.266 72.043 146.12 37 93 93 74 74 139 1 2 2 2 1 3 17226 2611 1130 2547 6134;6135;6136 7050;7051;7052 7051 3 DAEDLQK Unmodified 817.38176 0.38176214 1325 P08226;A0A1B0GX15;G3UWN5 Apoe Apolipoprotein E yes no 0 0 0 0 3.5 0.5 1 1 41.919 41.919 2 0.027379 12910 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.299 30.318 167.77 192.19 174.43 187.77 214.7 269.97 158 194 176 185 218 259 1 2 1 2 1 2 23970 2612 1325 2548 6137;6138 7053;7054 7053 2 DAEDQEAQLK Unmodified 1145.52 0.52004654 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 2 0 1 43.89 43.89 3 2.2608E-05 13408 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.26 71.833 39.564 27.124 0 0 0 39.442 37 28 0 0 0 37 1 1 0 0 0 1 2846.9 2613 1207 2549 6139 7055 7055 1 DAEELEK Unmodified 832.38143 0.38142779 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4.6 4.32 1 1 1 1 1 44.073 44.073 2 0.017243 13153 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.81 6.5986 1343.3 1386 1286.4 1597 1443.9 1828.3 1263 1408 1292 1551 1481 1753 1 5 2 4 4 4 290110 2614 551 2550 6140;6141;6142;6143;6144 7056;7057;7058;7059;7060 7060 5 DAEEQDTVLPAPPK Unmodified 1508.7359 0.73585297 2623 Q8QZT2 Ccsap Centriole, cilia and spindle-associated protein yes yes 0 0 0 0 4 0 1 56.68 56.68 3 0.00047939 19482 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.285 51.313 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2493.1 2615 2623 2551 6145 7061 7061 1 DAEGILEDLQSYR Unmodified 1507.7155 0.71545188 2800 Q921M7;A0A2I3BRN5;A0A2I3BPH9;A0A2I3BQK1 Fam49b Protein FAM49B yes no 0 0 0 0 6.25 3.96 1 1 1 1 77.72 77.72 2;3 8.5279E-05 28941 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.069 59.151 39.58 28 20.407 0 47.62 98.321 37 28 19 0 47 93 2 2 1 0 2 2 32829 2616 2800 2552 6146;6147;6148;6149 7062;7063;7064;7065;7066 7063 5 DAELIAEAK Unmodified 958.49713 0.49712625 438 A2A9Z1;A2A9Z2;P11531 Dmd Dystrophin yes no 0 0 0 0 4 0 1 56.517 56.517 3 0.025324 19380 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.187 23.157 0 0 0 40.441 0 29.848 0 0 0 37 0 28 0 0 0 1 0 1 3036.7 2617 438 2553 6150 7067 7067 1 DAENVGR Unmodified 759.35113 0.35113072 2301 Q80TJ1;K4DI76 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 2 0.816 1 1 1 25.19 25.19 2 0.010994 5048 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.92 41.471 547.69 299.67 389.28 529.81 583.72 599.49 514 303 382 516 601 578 3 2 2 3 3 3 83770 2618 2301 2554 6151;6152;6153 7068;7069;7070 7069 3 DAEQTEPEQR Unmodified 1201.5211 0.52110917 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 13 0 1 26.125 26.125 2 0.0085484 4735 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.657 41.354 0 20.216 0 9.4841 18.761 19.719 0 19 0 9 19 19 0 1 0 1 1 1 1337.6 2619 510 2555 6154 7071 7071 1 DAESQLVLQEWK Unmodified 1444.7198 0.71980898 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 5 0 1 71.22 71.22 3 0.011725 26022 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.481 32.818 20.215 0 28.939 28.176 37.408 0 19 0 28 28 37 0 1 0 1 1 1 0 6022.4 2620 1977 2556 6155 7072 7072 1 DAETAAAAAAVAAADPR Unmodified 1540.7481 0.74814899 257 A0A1B0GS08;J3QP43;Q0VBF8 6330403A02Rik Protein stum homolog yes no 0 0 0 0 6.25 3.96 1 1 1 1 61.079 61.079 2;3 2.886E-17 21525 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.78 85.382 79.933 82.431 29.387 37.645 74.725 58.121 75 83 28 37 75 56 3 4 1 2 3 2 43617 2621 257 2557 6156;6157;6158;6159 7073;7074;7075;7076;7077 7077 5 DAFADAVQR Unmodified 991.47231 0.47230849 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 4.5 0.5 1 1 47.187 47.187 2 0.0020105 14923 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.98 49.997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2622 1952 2558 6160;6161 7078;7079 7078 2 DAFLGSFLYEYSR Unmodified 1566.7355 0.73545904 656 CON__P02769 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 85.971 85.971 3 0.000115 33646 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.462 58.437 40.414 26.431 38.031 46.142 56.455 0 38 28 37 47 56 0 2 2 1 2 3 0 19822 + 2623 656 2559 6162;6163;6164;6165 7080;7081;7082;7083 7083 4 DAFMDHLK Unmodified 975.4484 0.44840192 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 6 0 1 54.313 54.313 3 0.035389 17403 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.878 29.976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2624 573 2560 6166 7084 7084 1 DAFPVAGQK Unmodified 931.47633 0.47633123 1621;1620 P54728;Q3TN85;Q8CAP3;P54726 Rad23b;Rad23a UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A no no 0 0 0 0 6.5 0.5 1 1 51.597 51.597 2 0.014913 15296 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.598 30.792 0 67.89 75.995 0 0 0 0 65 74 0 0 0 0 1 1 0 0 0 3099.7 2625 1621;1620 2561 6167;6168 7085;7086 7086 2 DAFQALEK Unmodified 920.46035 0.46034682 2776 Q91YR1 Twf1 Twinfilin-1 yes yes 0 0 0 0 6 0 1 60.516 60.516 2 0.011881 20363 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.525 43.967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2626 2776 2562 6169 7087 7087 1 DAFVAIVQSVK Unmodified 1175.655 0.65502388 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 10.6 1.36 1 2 1 1 78.743 78.743 2;3 2.6868E-13 24459 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 150.94 80.989 179.14 98.449 122.71 186.62 244.71 107.37 168 102 121 177 242 103 3 3 2 3 4 3 51267 2627 1050;1380 2563 6170;6171;6172;6173;6174 7088;7089;7090;7091;7092 7090 5 DAGGIAGLK Unmodified 800.43922 0.43921744 1348 P10852;A0A0U1RP98 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 8.67 3.09 1 1 1 52.71 52.71 2;3 0.0030153 16734 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.439 33.862 358.66 279.41 169.97 231.89 262.5 465.81 336 288 176 223 264 444 2 3 2 2 2 3 24607 2628 1348 2564 6175;6176;6177 7093;7094;7095 7093 3 DAGHPLYPFNDPY Unmodified 1504.6623 0.6622941 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 0 6.75 3.7 2 1 1 67.662 67.662 2;3 0.00043435 24346 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.006 53.334 0 0 60.592 28 19.197 68.742 0 0 56 28 19 65 0 0 1 1 1 2 13600 2629 3214 2565 6178;6179;6180;6181 7096;7097;7098;7099 7097 4 DAGMAEAWLCSQEPLVR Unmodified 1931.887 0.88696744 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 0 1 78.71 78.71 3 0.0053332 29589 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.86 29.945 0 0 8.8364 20.24 0 0 0 0 9 19 0 0 0 0 1 1 0 0 3797.5 2630 2186 2566 6182 7100 7100 1 DAGMQLQGYR Unmodified 1137.5237 0.52369213 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 46.971 46.971 2 4.6394E-05 14580 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.71 85.529 315.07 115.41 477 289.55 239.12 416.19 296 120 458 288 242 395 3 2 3 4 4 4 97754 2631 1312 2567 6183;6184;6185;6186 7101;7102;7103;7104;7105 7105 5 DAGPLLISLK Unmodified 1025.6121 0.61209643 1289 O89053 Coro1a Coronin-1A yes yes 0 0 0 0 9.25 2.28 1 1 1 1 74.261 74.261 2 3.1712E-05 24557 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.63 54.732 305.12 248.02 340.96 338.89 296.02 446.73 287 250 334 324 305 427 3 3 3 3 3 4 100290 2632 1289 2568 6187;6188;6189;6190 7106;7107;7108;7109 7108 4 DAGQISGLNVLR Unmodified 1241.6728 0.67279921 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 61.069 61.069 3 1.0868E-05 20704 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.334 60.016 87.983 81.576 111.68 93.535 77.509 145.96 83 84 112 93 83 139 2 2 2 2 2 2 14266 2633 1533 2569 6191;6192 7110;7111 7110 2 DAGTIAGLNVLR Unmodified 1198.667 0.66698555 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.5 2.22 1 1 2 1 1 65.707 65.707 2;3 5.0069E-27 22848 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 177.78 121.35 673.48 598.61 422.31 658.2 772.84 779.58 632 605 416 628 787 752 6 7 5 4 6 7 445570 2634 1762 2570 6193;6194;6195;6196;6197;6198 7112;7113;7114;7115;7116;7117;7118;7119;7120 7113 9 DAGTIAGLNVMR Unmodified 1216.6234 0.62340617 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 7 0 1 61.44 61.44 2 0.00091203 19941 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.201 51.459 29.584 36.6 46.266 26.063 94.819 36.736 28 37 46 28 93 37 1 1 1 1 1 1 4706 2635 1419 2571 6199 7121 7121 1 DAGTITGLNVLR Unmodified 1228.6776 0.67755023 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 7 0 2 64.676 64.676 2;3 1.9406E-05 21402 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.839 62.967 118.82 56.275 0 90.416 74.205 0 111 56 0 84 74 0 2 1 0 2 1 0 13095 2636 1397 2572 6200;6201 7122;7123 7123 2 DAGVIAGLNVLR Unmodified 1196.6877 0.68772099 1407;1394 Q61696;P17879;P16627 Hspa1a;Hspa1b;Hspa1l Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 8 0 1 71.097 71.097 2 0.00096984 23869 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.14 47.99 33.982 46.314 20.23 38.293 50.098 43.342 32 46 23 37 51 42 1 1 1 1 1 1 7920.9 2637 1407;1394 2573 6202 7124 7124 1 DAGYEFDICFTSVQK Unmodified 1778.7822 0.78215124 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 4.5 2.06 1 1 2 77.269 77.269 3;4 7.1108E-05 28232 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.063 72.739 20.292 125.72 98.884 113.75 89.036 87.83 19 121 102 111 93 84 1 4 3 3 3 2 14044 2638 3126 2574 6203;6204;6205;6206 7125;7126;7127;7128 7128 4 DAIEVCLEK Unmodified 1075.522 0.52196079 570;1041 B0V2P5;Q8BPN8;F6RYL8;F8WGX5;Q6PNC0 Dmxl2;Dmxl1 DmX-like protein 2;DmX-like protein 1 no no 0 0 0 0 5 0 1 61.727 61.727 3 0.003858 21536 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.347 37.138 0 39.368 0 40.441 0 0 0 37 0 37 0 0 0 1 0 1 0 0 2266 2639 570;1041 2575 6207 7129 7129 1 DAIGEFIR Unmodified 919.47633 0.47633123 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 5 0 1 61.633 61.633 2 0.010118 21542 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.458 20.717 48.898 35.278 47.409 0 57.278 37.808 46 37 46 0 56 37 1 1 1 0 1 1 7273.6 2640 992 2576 6208 7130 7130 1 DAIHFYNK Unmodified 1006.4872 0.48723027 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 6.5 0.5 1 1 49.693 49.693 3 0.014107 14348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.815 17.828 0 47.888 63.172 96.193 89.909 85.912 0 46 65 93 93 83 0 1 1 1 1 1 8059.3 2641 2092 2577 6209;6210 7131;7132 7132 2 DAILFPSFIHSQK Unmodified 1501.7929 0.79291434 1442 P24270 Cat Catalase yes yes 0 0 0 0 9 0 1 71.226 71.226 3 0.021159 23140 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.227 12.603 0 107.3 73.63 0 0 0 0 102 74 0 0 0 0 1 1 0 0 0 14901 2642 1442 2578 6211 7133 7133 1 DAISGVGTDEK Unmodified 1090.5142 0.51423288 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 47.186 47.186 3 0.00051799 14883 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.342 40.997 0 59.008 34.431 46.296 102.62 56.768 0 56 37 46 102 56 0 1 1 1 1 1 4535 2643 1050;1380 2579 6212 7134 7134 1 DAIVTIVSAMSTIIPPVPLANPENQFR Unmodified 2892.5419 0.54191496 2540 Q8CGK7;Q66L47 Gnal Guanine nucleotide-binding protein G(olf) subunit alpha yes no 0 0 0 0 1 0 1 117.22 117.22 4 3.6758E-05 35731 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.399 38.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 682.06 2644 2540 2580 6213 7135 7135 1 DALEIYK Unmodified 850.44363 0.44363412 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 5.5 0.5 2 2 59.227 59.227 2;3 5.502E-07 20448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.84 60.812 328.73 219.84 289.38 238.7 396.84 308.48 309 232 291 241 400 300 2 2 2 2 2 2 19661 2645 2129 2581 6214;6215;6216;6217 7136;7137;7138;7139 7136 4 DALEIYKR Unmodified 1006.5447 0.54474515 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 1 7 0 1 50.078 50.078 3 0.044833 14529 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.258 11.909 314.91 283.93 393.87 383.02 353.86 422.7 297 293 397 378 369 406 1 1 1 1 1 1 26924 2646 2129 2582 6218 7140 7140 1 DALKTEFK Unmodified 950.5073 0.50729701 1637 P56382 Atp5e ATP synthase subunit epsilon, mitochondrial yes yes 0 0 0 1 9.33 2.62 1 1 1 51.439 51.439 3 0.014596 16547 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.1 30.148 999.54 783.57 1223.2 980.86 981.96 1314.1 942 819 1219 981 1025 1259 3 3 3 3 3 3 65938 2647 1637 2583 6219;6220;6221 7141;7142;7143 7143 3 DALLAELSTTK Unmodified 1160.6289 0.62886871 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 7 0 1 72.281 72.281 3 0.0044959 24947 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.452 24.58 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2177.1 2648 2424 2584 6222 7144 7144 1 DALLDQIR Unmodified 942.51345 0.51344502 2770 Q91YD9 Wasl Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 0 6 0 1 58.456 58.456 2 0.055638 19362 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.597 15.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2649 2770 2585 6223 7145 7145 1 DALLLIFANK Unmodified 1116.6543 0.6542956 2390 Q8BGX0 Trim23 E3 ubiquitin-protein ligase TRIM23 yes yes 0 0 0 0 11 0.816 1 1 1 86.473 86.473 3 0.0023973 27366 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.283 0 55.657 20.216 0 0 9.414 50.102 55 19 0 0 9 47 2 1 0 0 1 1 6115.5 2650 2390 2586 6224;6225;6226 7146;7147;7148;7149 7148 4 DALLLWCQMK Unmodified 1276.6308 0.63079974 2148;2186;893;842 Q68FG2;Q3UGX2;E9Q397;P15508;Q62261;A0A0A0MQG2;E9PX29;Q91ZE6 Sptbn2;Sptb;Sptbn1;Sptbn4 Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 10 0.816 1 1 1 81.735 81.735 2;3 1.0031E-05 25782 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.22 89.368 0 126.58 129.31 84.288 56.894 39.442 0 121 130 83 56 37 0 3 3 2 1 1 46370 2651 2186;893;2148;842 2587 6227;6228;6229 7150;7151;7152;7153 7151 4 DALLSALSIQNYHLECNETK Unmodified 2318.1213 0.12126071 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 0.471 2 1 75.472 75.472 3;4 1.1175E-13 26451 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.21 89.919 0 50.008 59.386 77.343 23.385 88.877 0 47 56 74 23 84 0 2 1 2 1 3 19798 2652 2148 2588 6230;6231;6232 7154;7155;7156 7154 3 DALQGFK Unmodified 777.4021 0.40210366 1032 F8VQ88;Q9CQI7;Q62189 Gm5145;Snrpb2;Snrpa U2 small nuclear ribonucleoprotein B'';U1 small nuclear ribonucleoprotein A yes no 0 0 0 0 7 0 1 55.499 55.499 2 0.064148 17080 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.789 36.909 88.527 0 89.36 0 116.11 0 83 0 83 0 111 0 1 0 1 0 1 0 4809.1 2653 1032 2589 6233 7157 7157 1 DALSAVLPK Unmodified 912.52803 0.52803245 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 7 0 1 66.088 66.088 3 0.0024056 22019 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.547 33.525 0 0 48.977 17.848 0 0 0 0 46 19 0 0 0 0 1 1 0 0 1578.4 2654 2054 2590 6234 7158 7158 1 DALSDLALHFLNK Unmodified 1455.7722 0.7721789 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 10.8 1.48 1 1 1 1 86.181 86.181 3 1.8689E-05 30109 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.66 70.332 33.263 95.205 48.033 90.654 155.27 205.04 31 93 46 84 158 195 1 3 1 3 4 4 37501 2655 1824 2591 6235;6236;6237;6238 7159;7160;7161;7162;7163;7164;7165 7159 7 DALSEDEWMR Unmodified 1250.5238 0.52375171 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 3 0 1 60.743 60.743 2 2.1634E-05 21568 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.565 86.855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2656 1882 2592 6239 7166 7166 1 DALVNAVVDPLSAYSSAVASVPR Unmodified 2300.2012 0.20122559 2350 Q80ZX0 Sec24b yes yes 0 0 0 0 11 2 1 1 92.441 92.441 3 6.3074E-05 36807 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.423 27.996 0 29.792 0 0 19.197 19.706 0 28 0 0 19 19 0 1 0 0 1 1 1463.8 2657 2350 2593 6240;6241 7167;7168 7168 2 DAMENEMR Unmodified 994.38482 0.38481539 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 1.5 0.5 1 1 38.099 38.099 2 0.0061412 10234 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.205 58.951 0 0 38.774 28.293 0 39.442 0 0 37 28 0 37 0 0 1 1 0 1 6176.7 2658 2517 2594 6242;6243 7169;7170 7169 2 DAMLENQTPELFQDVNKPK Unmodified 2216.0783 0.078333261 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 1 5 0 1 69.028 69.028 4 2.0558E-05 24944 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.918 51.069 0 20.216 0 0 37.714 28.772 0 19 0 0 37 28 0 1 0 0 1 1 2855.5 2659 1412 2595 6244 7171 7171 1 DAMPSDANLNSINK Unmodified 1488.6879 0.68785692 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 4 0.816 1 1 1 56.765 56.765 3 1.7174E-11 19281 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.56 101.43 158.01 20.216 133.08 152.35 117.31 125.68 148 19 130 148 120 120 2 1 2 2 2 2 55288 2660 1786 2596 6245;6246;6247 7172;7173;7174 7174 3 DAMPSDANLNSINK Deamidation (N) 1489.6719 0.67187251 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 1 0 0 4.5 0.5 1 1 58.939 58.939 3 0.00021569 20267 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.133 52.832 107.71 146.72 208.65 176.45 185.4 0 102 148 204 176 185 0 2 3 2 3 3 0 15601 2661 1786 2596 6248;6249 7175;7176;7177 7177 713;714 3 DAMQQQLAEYQELLDIK Unmodified 2034.9932 0.99320665 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 6 0 1 89.366 89.366 3 0.039998 33777 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.818 8.7185 0 9.0928 28.902 19.044 0 0 0 9 28 19 0 0 0 1 1 1 0 0 1701.6 2662 182 2597 6250 7178 7178 1 DAMQYASESK Unmodified 1128.4757 0.47573888 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 4 0 1 47.607 47.607 3 0.0070695 15102 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.452 32.978 0 0 87.836 44.214 44.078 58.438 0 0 83 46 46 56 0 0 1 1 1 1 6224.8 2663 2185 2598 6251 7179 7179 1 DANFLEEER Unmodified 1121.4989 0.49891717 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 2.5 0.5 1 1 52.276 52.276 2 0.017908 17782 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.92 34.699 15.935 54.013 14.41 19.332 68.037 64.151 15 52 15 19 68 62 1 2 1 1 2 2 14538 2664 732 2599 6252;6253 7180;7181 7181 2 DANGNSFATR 2 Deamidation (N) 1053.4363 0.43631691 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 2 0 0 2 0 1 37.292 37.292 2 0.00022007 10568 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.82 88.937 49.176 36.052 0 50.278 0 59.696 46 37 0 46 0 56 1 1 0 1 0 1 3317.6 2665 1730 2600 6254 7182 7182 670;671 1 DANGNSFATR Deamidation (N) 1052.4523 0.45230133 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 1 0 0 3 0 1 36.162 36.162 2 0.020794 10239 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.913 55.556 48.999 0 60.345 0 0 59.696 46 0 56 0 0 56 1 0 1 0 0 1 7401 2666 1730 2600 6255 7183 7183 670;671 1 DANIALLELSASK Unmodified 1343.7296 0.72964538 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 7 0 1 75.974 75.974 3 0.04614 26724 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.527 2.1181 39.564 27.124 0 30.256 18.484 0 37 28 0 28 19 0 1 1 0 1 1 0 4358.1 2667 2249 2601 6256 7184 7184 1 DANLYISGLPR Unmodified 1217.6404 0.64043645 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 63.384 63.384 2 0.0017853 21730 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.309 50.496 49.876 37.55 61.411 22.556 58.889 82.534 47 37 60 23 60 79 2 1 2 1 2 2 5206.4 2668 1812 2602 6257;6258 7185;7186;7187 7186 3 DANLYVSGLPK Unmodified 1175.6186 0.61863837 436 Q61701;A2A9S2;A2A9S0;Q8BVA9;A2A9R6;A2A9R8;A2A9S3;B1AXZ0;Q80UJ0;Q3UR02;B1AXZ5;Q80Y51;B1AXZ6;Q60899;B1AXZ4;A0A1L1SS95;Q60900 Elavl4;Elavl2;Elavl3 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 3 yes no 0 0 0 0 7 0 1 63.366 63.366 3 0.00037104 20766 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.617 59.236 48.852 35.151 55.218 67.754 0 69.29 46 37 56 65 0 65 1 1 1 1 0 1 6923.9 2669 436 2603 6259 7188 7188 1 DANNMPVTAR Unmodified 1087.508 0.50804206 2194 Q6GT24;D3Z0Y2 Prdx6 yes no 0 0 0 0 4.5 0.5 1 1 37.06 37.06 2 0.00072316 10139 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.82 16.683 108.64 27.339 111.93 134.22 63.609 0 102 28 111 130 65 0 2 1 2 2 1 0 22318 2670 2194 2604 6260;6261 7189;7190 7189 2 DAPAVPSAPPSYEEATSGEGLK Unmodified 2172.0223 0.02225817 2577 Q8K097 Faim2 Protein lifeguard 2 yes yes 0 0 0 0 4 0 1 62.731 62.731 3 3.2263E-06 22343 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.15 38.636 0 20.216 0 20.252 27.359 29.067 0 19 0 19 28 28 0 1 0 1 1 1 4400.4 2671 2577 2605 6262 7191 7191 1 DAPDGPSVEAEPEYTFEGLR Unmodified 2177.9753 0.97530798 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 68.678 68.678 3 7.4231E-08 25184 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.114 51.576 25.706 39.009 0 41.534 9.0934 9.3345 24 37 0 38 9 9 2 2 0 2 1 1 16955 2672 3266 2606 6263;6264 7192;7193;7194 7193 3 DAPGREDNTFK Unmodified 1248.5735 0.57347909 1305 P04370 Mbp Myelin basic protein yes yes 0 0 0 1 4 0 1 38.405 38.405 3 0.045223 10835 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.559 33.653 30.044 0 0 30.604 0 39.442 28 0 0 28 0 37 1 0 0 1 0 1 2879.8 2673 1305 2607 6265 7195 7195 1 DAPNDASYDAVR Unmodified 1292.5633 0.56330834 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 2 0 1 40.629 40.629 2 5.0303E-05 12119 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.605 57.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2674 828 2608 6266 7196 7196 1 DAPPPTR Unmodified 752.3817 0.38170256 252 A0A1B0GRR8;Q62376;A0A1B0GR69;A0A1B0GRV8;A0A1B0GR44 Snrnp70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 0 3 0 1 25.224 25.224 2 0.02751 5126 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.352 55.81 29.869 29.792 29.329 18.325 93.761 47.426 28 28 28 19 92 47 1 1 1 1 2 2 4516.3 2675 252 2609 6267 7197;7198 7197 2 DAQDALVPR Unmodified 983.50361 0.50360861 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 0 13 0 1 44.756 44.756 2 0.013848 13769 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.552 42.129 68.809 72.493 95.93 0 83.495 96.755 65 74 93 0 83 93 1 1 1 0 1 1 6979.3 2676 450 2610 6268 7199 7199 1 DAQDLDSGR Unmodified 975.42575 0.42575222 2414 Q8BIJ7 Rufy1 RUN and FYVE domain-containing protein 1 yes yes 0 0 0 0 1 0 1 32.91 32.91 2 0.0031437 8076 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.867 51.515 29.904 27.776 0 49.966 16.57 29.375 28 28 0 46 19 28 1 1 0 1 1 1 4423.4 2677 2414 2611 6269 7200 7200 1 DAQPQLEEADDDLDSK Unmodified 1787.7697 0.76973188 705 D3YWL7;Q61599 Arhgdib Rho GDP-dissociation inhibitor 2 yes no 0 0 0 0 1 0 1 56.835 56.835 3 1.0027E-11 18041 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.24 101.65 0 58.649 55.929 25.684 84.366 37.035 0 56 56 28 83 37 0 1 1 1 1 1 6538.6 2678 705 2612 6270 7201 7201 1 DAQVVQVVLDGLSNILK Unmodified 1810.02 0.020013746 75 O35343;A0A0B4J1E7 Kpna4 Importin subunit alpha-3 yes no 0 0 0 0 11.3 1.25 1 1 1 112.35 112.35 3 5.3516E-13 36191 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.63 89.74 13.949 18.003 25.096 36.286 25.172 9.594 13 17 24 35 25 9 1 3 2 4 2 1 13355 2679 75 2613 6271;6272;6273 7202;7203;7204;7205;7206 7205 5 DAQWVGFITR Unmodified 1191.6037 0.60365701 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 7 0 1 70.65 70.65 2 0.034901 24244 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.754 20.823 0 0 70.33 0 0 69.29 0 0 65 0 0 65 0 0 1 0 0 1 4932.7 2680 3342 2614 6274 7207 7207 1 DASAPGGPPER Unmodified 1052.4887 0.48868683 515 A2ASM0;A2ASL8;Q7TQ95 Lnp Protein lunapark yes no 0 0 0 0 3 0 1 31.175 31.175 2 0.00055378 7909 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.556 56.971 29.952 18.196 0 20.767 0 34.112 28 19 0 19 0 32 1 1 0 1 0 1 2595 2681 515 2615 6275 7208 7208 1 DASDDLDDLNFFNQK Unmodified 1755.7588 0.75877326 2855 Q99L45;E0CXJ3 Eif2s2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 0 4.5 0.5 1 1 80.553 80.553 3 2.432E-05 30183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.769 57.55 29.856 56.355 0 0 28.291 29.041 28 56 0 0 28 28 1 2 0 0 1 1 3711.9 2682 2855 2616 6276;6277 7209;7210 7209 2 DASGMLYNLASAIK Unmodified 1452.7283 0.72826518 102 A0A0G2JGQ6;Q9JLM8;A0A0G2JE54;Q8CCN4;A0A0G2JGH1;Q1EDH1;H7BX36;A0A0G2JEN4 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 10 0 1 85.713 85.713 3 5.758E-08 27440 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.759 62.226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2683 102 2617 6278 7211 7211 1 DASHPQFK Unmodified 928.44028 0.44028008 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 0 6 0.816 1 1 1 36.583 36.583 3 0.0062108 9522 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.342 50.441 139.02 92.255 0 138.03 157.88 0 130 93 0 129 157 0 2 1 0 2 2 0 8716 2684 1840 2618 6279;6280;6281 7212;7213;7214 7212 3 DASNWSTEK Unmodified 1036.4462 0.44615331 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 5 0 1 45.777 45.777 2 0.020755 13891 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.374 30.996 39.416 0 47.899 37.586 0 0 37 0 46 37 0 0 1 0 1 1 0 0 4330.7 2685 2420 2619 6282 7215 7215 1 DASPTPSTDAEYPANGSGADR Deamidation (N) 2078.8665 0.86648581 1231 O55033;A0A0J9YUK4 Nck2 Cytoplasmic protein NCK2 yes no 0 1 0 0 1 0 2 43.597 43.597 3 1.3104E-10 12175 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.42 84.32 5.3185 9.2174 0 0 0 9.594 5 9 0 0 0 9 1 1 0 0 0 1 9157.8 2686 1231 2620 6283;6284 7216;7217 7216 334 2 DASTLIR Unmodified 774.42357 0.42356738 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 6 0 1 43.994 43.994 2 0.032734 12574 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.097 17.96 99.227 111.41 0 0 170.46 123.06 93 111 0 0 167 120 1 1 0 0 1 1 11830 2687 2468 2621 6285 7218 7218 1 DASVAEAWLIAQEPYLASR Unmodified 2089.048 0.04801941 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9.5 3.5 1 1 87.6 87.6 3 2.46E-08 32950 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.263 60.318 20.292 18.848 0 39.925 27.454 0 19 19 0 37 28 0 1 1 0 1 1 0 3735.4 2688 893 2622 6286;6287 7219;7220 7219 2 DASVAEAWLLGQEPYLSSR Unmodified 2091.0273 0.027283968 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.38 2.83 1 1 2 2 2 86.548 86.548 2;3;4 1.7674E-14 33153 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.14 96.708 65.872 88.294 55.596 19.594 74.798 98.071 64 84 56 19 74 93 4 2 3 1 3 3 97876 2689 2148 2623 6288;6289;6290;6291;6292;6293;6294;6295 7221;7222;7223;7224;7225;7226;7227;7228;7229 7221 9 DATLLLPSYEK Unmodified 1248.6602 0.66016884 691 E9Q3J1;D3YV13;Q80V91 Dtx3 Probable E3 ubiquitin-protein ligase DTX3 yes no 0 0 0 0 7 0 1 70.159 70.159 3 0.005898 24040 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.693 32.389 29.904 27.776 0 0 29.288 0 28 28 0 0 28 0 1 1 0 0 1 0 1735.7 2690 691 2624 6296 7230 7230 1 DATNDQVTK Unmodified 990.4618 0.46180338 1278 O88844;A0A087WPT4;A0A087WRS9;D3YVY3;A0A087WRM4 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 3.5 0.5 1 1 35.993 35.993 2;3 0.00099697 9661 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.95 61.823 107.54 117.81 220.47 53.457 197.14 96.826 102 121 213 56 194 93 2 2 2 1 2 1 9810 2691 1278 2625 6297;6298 7231;7232 7232 2 DATNVGDEGGFAPNILENK Unmodified 1959.9174 0.91739917 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 5.44 2.87 2 2 2 2 1 70.409 70.409 2;3;4 2.0232E-46 25594 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 153.04 126.5 488.29 514.36 558.06 429.54 536.76 507.38 458 513 547 409 531 483 6 8 6 6 7 9 576600 2692 1398 2626 6299;6300;6301;6302;6303;6304;6305;6306;6307 7233;7234;7235;7236;7237;7238;7239;7240;7241;7242;7243;7244;7245 7236 13 DATNVGDEGGFAPNILENK Deamidation (N) 1960.9014 0.90141475 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 1 0 0 3.33 0.471 2 1 72.582 72.582 3 8.7155E-10 26318 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.09 85.505 50.162 19.096 29.103 9.837 0 78.884 47 19 28 9 0 74 3 1 1 1 0 3 10587 2693 1398 2626 6308;6309;6310 7246;7247;7248 7248 478;479;480 3 DATNVGDEGGFAPNILENSEALELVK Unmodified 2701.3083 0.30826943 1399 P17183;A0A0N4SUX5 Eno2 Gamma-enolase yes no 0 0 0 0 6.6 3.38 1 2 2 2 1 2 88.632 88.632 3;4 4.0469E-29 33482 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.57 116.03 259.74 184.6 221.93 315.71 252.14 307.28 244 183 218 304 259 295 11 6 7 8 8 10 516230 2694 1399 2627 6311;6312;6313;6314;6315;6316;6317;6318;6319;6320 7249;7250;7251;7252;7253;7254;7255;7256;7257;7258;7259;7260;7261 7251 13 DATNVGDEGGFAPNILENSEALELVK Deamidation (N) 2702.2923 0.29228502 1399 P17183;A0A0N4SUX5 Eno2 Gamma-enolase yes no 0 1 0 0 3.5 0.5 1 1 91.778 91.778 4 5.6057E-20 33980 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.934 69.006 0 9.1679 30.904 22.591 0 24.518 0 9 30 22 0 23 0 1 2 1 0 2 4109 2695 1399 2627 6321;6322 7262;7263 7263 487;488 2 DATPPPVPAERPSYK Unmodified 1623.8257 0.82567103 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 9 4 1 1 45.866 45.866 3 0.00017838 14129 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.26 47.785 108.26 63.891 146.02 0 132.31 76.482 102 65 139 0 129 74 2 1 2 0 2 1 11408 2696 570 2628 6323;6324 7264;7265 7264 2 DAVEASAEGPR Unmodified 1100.5098 0.5098162 452 Z4YLF7;A2AEW0;A2AEW1;Q64092 Tfe3 Transcription factor E3 yes no 0 0 0 0 1 0 1 35.263 35.263 2 0.0018661 9154 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.783 54.621 0 0 0 20.767 0 20.254 0 0 0 19 0 19 0 0 0 1 0 1 1603 2697 452 2629 6325 7266 7266 1 DAVFIPAGWDNDKK Unmodified 1574.7729 0.77290718 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 1 7 1 1 1 66.955 66.955 3;4 0.029003 21806 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.55 19.186 88.193 61.654 93.281 47.579 57.278 77.25 83 65 92 46 56 74 2 2 2 1 1 2 6373.7 2698 2646 2630 6326;6327 7267;7268 7268 2 DAVFIPAGWDNEKK Unmodified 1588.7886 0.78855725 282 Q6PDL0;A0A1D5RM94;A0A1D5RMC1 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 1 6 0 1 66.887 66.887 4 0.0099672 23310 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.789 18.598 0 48.881 67.397 0 0 0 0 47 65 0 0 0 0 1 1 0 0 0 2068.4 2699 282 2631 6328 7269 7269 1 DAVIYPILVEFTR Unmodified 1534.8395 0.83953018 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 0 10.5 2.5 1 1 92.684 92.684 2;3 0.00041817 33667 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.908 24.3 0 0 20.558 0 0 48.254 0 0 19 0 0 47 0 0 1 0 0 2 2931.8 2700 3234 2632 6329;6330 7270;7271 7270 2 DAVLLVFANK Unmodified 1088.623 0.62299547 1693;1833;1834 P84084;P61205;P84078 Arf5;Arf3;Arf1 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 1 no no 0 0 0 0 10.8 1.39 2 2 1 2 1 80.024 80.024 2;3 1.3948E-15 27372 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 176.79 102.86 849.54 718.74 1090.4 465.16 1447.8 1112.2 801 746 1060 458 1446 1072 4 4 4 3 7 3 392220 2701 1834;1693;1833 2633 6331;6332;6333;6334;6335;6336;6337;6338 7272;7273;7274;7275;7276;7277;7278;7279;7280 7272 9 DAVLNAWAEDVDLR Deamidation (N) 1586.7577 0.75765105 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 1 0 0 3.25 0.829 1 1 2 76.368 76.368 3 0.00017532 27870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.669 51.92 9.5583 19.571 14.41 0 5.23 9.594 9 19 14 0 5 9 1 1 2 0 1 1 21232 2702 1609 2634 6339;6340;6341;6342 7281;7282;7283;7284 7282 618 4 DAVLNAWAEDVDLR Unmodified 1585.7736 0.77363546 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 8 3.65 1 1 1 1 2 78.988 78.988 2;3 4.5672E-68 30235 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 208.28 161.09 276.55 350.02 370.39 236.88 112.37 206.87 261 352 363 231 112 195 5 7 5 5 4 4 371020 2703 1609 2634 6343;6344;6345;6346;6347;6348 7285;7286;7287;7288;7289;7290;7291;7292 7291 8 DAVTHIGR Unmodified 867.45626 0.45626449 97 A0A0G2JFB4;A0A0G2JH04;P63073;A0A0G2JGT5 Eif4e Eukaryotic translation initiation factor 4E yes no 0 0 0 0 5 0.816 1 1 1 31.619 31.619 3 0.0026412 7121 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.181 55.878 20.129 38.16 54.743 107.15 57.22 39.442 19 38 56 102 56 37 1 2 2 3 1 1 8531.4 2704 97 2635 6349;6350;6351 7293;7294;7295 7294 3 DAVTYTEHAK Unmodified 1133.5353 0.53530267 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 7 3.54 1 1 1 1 38.899 38.899 3 5.3114E-06 10259 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.75 85.022 697.76 1322.9 1045.2 1437.6 985.19 1423.8 659 1304 1069 1387 1015 1362 3 4 2 3 3 4 464300 2705 1739 2636 6352;6353;6354;6355 7296;7297;7298;7299 7298 4 DAYCSEEK Unmodified 1000.3808 0.38077587 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 37.146 37.146 2;3 0.0060906 10753 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.41 78.878 158.02 156.39 80.068 0 302.8 228.85 148 157 74 0 297 222 3 3 1 0 4 3 27275 2706 1382 2637 6356;6357;6358;6359 7300;7301;7302;7303 7301 4 DAYETAK Unmodified 796.3603 0.36029842 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 4 0 1 38.128 38.128 2 0.04914 10711 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.774 10.345 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 3795.2 2707 2806 2638 6360 7304 7304 1 DAYSGGAVNLYHVR Unmodified 1520.7372 0.73719038 1243 O55234;Q8BTY5 Psmb5 Proteasome subunit beta type-5 yes no 0 0 0 0 5.5 0.5 1 1 49.165 49.165 3 2.6384E-07 14951 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.97 95.151 0 77.312 125.2 0 162.58 47.71 0 74 120 0 157 46 0 1 2 0 2 1 14971 2708 1243 2639 6361;6362 7305;7306 7306 2 DCAAHSLR Unmodified 928.4185 0.41849878 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 4 0 1 23.96 23.96 3 0.059062 4296 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.68 29.477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2709 1903 2640 6363 7307 7307 1 DCCTESACSKPDDDILDIPLDDPGANAAAAK Unmodified 3304.417 0.41698632 1674 P60761 Nrgn Neurogranin;NEUG(55-78) yes yes 0 0 0 1 6.67 4.5 1 1 1 87.336 87.336 4 0.014665 31594 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 30.104 24.503 27.654 14 40.998 48.097 27.079 7.462 26 14 40 46 28 7 2 1 2 1 1 1 5236.8 2710 1674 2641 6364;6365;6366 7308;7309;7310 7308 3 DCDHADEQK Unmodified 1116.4142 0.41420126 136 A0A0N4SVS6;P53996 Cnbp Cellular nucleic acid-binding protein yes no 0 0 0 0 1 0 1 26.189 26.189 3 6.6535E-06 4959 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 137.69 129.97 78.858 0 91.366 198.95 0 99.138 74 0 93 187 0 93 1 0 1 1 0 1 18740 2711 136 2642 6367 7311 7311 1 DCDLQEDACYNCGR Unmodified 1774.6345 0.6345175 136 A0A0N4SVS6 yes yes 0 0 0 0 1 0 1 44.27 44.27 3 1.842E-07 12691 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.12 107.79 0 0 19.261 29.107 18.537 0 0 0 19 28 19 0 0 0 1 1 1 0 7068.8 2712 136 2643 6368 7312 7312 1 DCEAEVR Unmodified 877.35998 0.35998084 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 13 0 1 27.731 27.731 2 0.012754 5535 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.17 61.158 0 53.344 55.054 52.462 0 0 0 51 56 51 0 0 0 1 1 1 0 0 8732.8 2713 2272 2644 6369 7313 7313 1 DCEDPNPLIR Unmodified 1227.5554 0.55538619 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 6 4.97 1 1 1 49.072 49.072 2 5.6734E-77 16364 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 234.03 173.38 352.01 358.55 45.16 503.15 534.45 372.22 330 360 46 472 542 360 3 3 1 4 3 3 161590 2714 1203;3123 2645 6370;6371;6372 7314;7315;7316;7317 7316 4 DCEECIQLEPTFIK Unmodified 1780.8012 0.80117212 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 72.664 72.664 3 9.7571E-05 26533 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.063 73.925 29.818 37.249 104.38 56.54 133.75 19.732 28 37 101 56 131 19 1 1 3 2 3 1 11235 2715 2092 2646 6373;6374;6375;6376 7318;7319;7320;7321 7319 4 DCEVIER Unmodified 919.40693 0.40693104 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 4.75 4.82 1 1 1 1 36.41 36.41 2 0.0056661 9637 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 137.18 79.716 247.09 303.75 309.3 339.02 265.19 410.6 232 306 306 325 259 389 2 5 3 4 3 5 146080 2716 815;2590 2647 6377;6378;6379;6380 7322;7323;7324;7325;7326;7327 7323 6 DCHVIDGK Unmodified 942.42292 0.42291545 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 3.67 0.471 1 2 38.389 38.389 2;3 0.0070166 11310 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.423 40.911 49.179 38.603 152.93 104.16 46.807 126.58 46 37 148 102 46 120 1 1 3 2 1 2 48981 2717 2291 2648 6381;6382;6383 7328;7329;7330;7331 7328 4 DCLINAAK Unmodified 903.4484 0.44840192 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 8.5 2.69 1 1 1 1 51.245 51.245 2;3 0.010143 14508 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.392 48.353 257.04 386.84 327.3 316.68 430.9 408.77 243 385 336 315 437 395 2 3 2 2 2 3 20799 2718 1356 2649 6384;6385;6386;6387 7332;7333;7334;7335 7334 4 DCLNVLNK Unmodified 974.48552 0.48551571 3326 Q9WU28;H7BWX1 Pfdn5 Prefoldin subunit 5 yes no 0 0 0 0 7 0 1 58.392 58.392 2 0.034814 18482 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.812 24.094 0 58.517 63.824 67.241 0 59.696 0 56 65 65 0 56 0 1 1 1 0 1 4272.4 2719 3326 2650 6388 7336 7336 1 DCLVLESFK Unmodified 1109.5427 0.54269624 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 9.5 3.5 1 1 70.984 70.984 2;3 0.00053828 25259 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.649 44.281 0 0 0 29.369 65.68 27.974 0 0 0 28 65 28 0 0 0 1 1 1 4118.7 2720 1044 2651 6389;6390 7337;7338 7337 2 DCPLNTEAASNK Unmodified 1318.5823 0.58232922 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 4.5 0.5 1 1 44.392 44.392 3 9.205E-06 13679 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.82 63.411 159.08 52.873 89.506 0 65.345 136.72 149 56 83 0 65 130 2 1 1 0 1 2 20883 2721 1203 2652 6391;6392 7339;7340 7339 2 DCPSGILNLEEFQQLYIK Unmodified 2166.0667 0.066705942 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 8 2.92 2 1 1 91.107 91.107 3;4 1.3241E-13 33760 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.77 98.545 48.761 0 129.84 18.864 83.654 75.903 46 0 121 19 83 74 1 0 2 1 2 3 16435 2722 2392 2653 6393;6394;6395;6396 7341;7342;7343;7344 7343 4 DCPSGQLDAAGFQK Unmodified 1492.6616 0.66164217 2439 Q8BNY6 Ncs1 Neuronal calcium sensor 1 yes yes 0 0 0 0 4.5 0.5 1 1 55.591 55.591 3 0.02286 18711 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.629 18.378 99.073 81.495 129.35 111.92 155.82 125.31 93 83 129 111 158 121 2 2 2 2 3 2 7385.7 2723 2439 2654 6397;6398 7345;7346;7347 7347 3 DCPTGILNVDEFK Unmodified 1506.7024 0.70244436 1832 P84075;E9PV73;A2A7R5 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 0 5.5 0.5 1 1 73.133 73.133 2 0.00036842 26850 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.839 65.635 29.864 0 30.248 9.6683 27.837 29.31 28 0 28 9 28 28 2 0 1 1 2 1 3006.9 2724 1832 2655 6399;6400 7348;7349 7348 2 DCPTGILNVDEFKK Unmodified 1634.7974 0.79740737 1832 P84075;E9PV73;A2A7R5 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 1 7.67 2.56 1 1 2 1 1 66.766 66.766 3;4 1.1473E-21 23235 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 140.74 113.33 877.17 956.76 903.75 724.15 855.75 977.01 827 969 900 719 882 933 5 5 4 4 5 4 131940 2725 1832 2656 6401;6402;6403;6404;6405;6406 7350;7351;7352;7353;7354;7355 7351 6 DCPVSSYNEWDPLEEVIVGR Deamidation (N) 2364.058 0.057991749 3098 Q9D964 Gatm Glycine amidinotransferase, mitochondrial yes yes 0 1 0 0 4 0 1 89.077 89.077 3 0.011068 33605 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.136 33.514 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 1168 2726 3098 2657 6407 7356 7356 1072 1 DCQELEDLIK Unmodified 1261.586 0.58601761 305 A0A1L1STC6;Q6ZWR6;A0A1L1SRV6 Syne1 Nesprin-1 yes no 0 0 0 0 6 0 1 109.15 109.15 2 0.035185 38041 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.549 31.168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2727 305 2658 6408 7357 7357 1 DCTSALALVPFSIKPLLR Unmodified 2000.1129 0.11286827 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 1 11.5 0.5 1 1 87.781 87.781 3 0.0038745 28026 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.159 19.43 0 43.624 0 30.604 29.288 33.046 0 41 0 28 28 31 0 2 0 1 1 1 4362.9 2728 2994 2659 6409;6410 7358;7359 7358 2 DCTVEMPILK Unmodified 1204.5832 0.58318084 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YUR5;Q91YZ2;P56546;A0A0J9YVI3;E9PWQ9;A0A0J9YU66;E9Q0T4 Ctbp1;Ctbp2 C-terminal-binding protein 1;C-terminal-binding protein 2 yes no 0 0 0 0 5 0 1 67.62 67.62 3 0.027156 24247 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.308 18.516 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 1 0 1 0 3113.3 2729 114 2660 6411 7360 7360 1 DCVCKGEEGAK Unmodified 1251.5224 0.5223715 1471 P28184 Mt3 Metallothionein-3 yes yes 0 0 0 1 7 3.54 1 1 1 1 37.035 37.035 3 0.0011536 10433 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.775 50.366 458.91 660.21 536.05 562.01 266.2 629.08 432 658 528 548 268 594 3 4 3 4 2 2 76260 2730 1471 2661 6412;6413;6414;6415 7361;7362;7363;7364 7361 4 DCVGPEVENACANPAAGTVILLENLR Unmodified 2781.3426 0.34256323 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 8 3.65 1 1 1 1 2 87.595 87.595 3;4 5.8773E-24 33230 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.24 98.444 82.744 108.83 131.75 42.404 142.85 138.51 78 107 128 44 142 133 4 5 6 3 5 5 91573 2731 1334 2662 6416;6417;6418;6419;6420;6421 7365;7366;7367;7368;7369;7370;7371;7372;7373;7374;7375 7365 11 DCVGPEVENACANPAAGTVILLENLR Deamidation (N) 2782.3266 0.32657881 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 1 0 0 4 0 1 90.158 90.158 3 1.1312E-19 33770 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.839 73.75 5.3531 0 1.9962 3.16 0 0 5 0 2 3 0 0 1 0 1 1 0 0 1754.1 2732 1334 2662 6422 7376 7376 400 1 DCYPAVQK Unmodified 979.44332 0.44331654 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 5 0 1 45.597 45.597 3 0.010599 13807 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.999 43.219 59.801 0 48.235 27.729 0 59.696 56 0 46 28 0 56 1 0 1 1 0 1 2464 2733 1798 2663 6423 7377 7377 1 DCYPVQETFIR Unmodified 1426.6551 0.65510023 2870 Q99M71;A0A1Y7VKS9 Epdr1 Mammalian ependymin-related protein 1 yes no 0 0 0 0 5 0 1 60.337 60.337 2 0.00055319 20928 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.561 59.639 0 19.744 28.261 19.083 0 0 0 19 28 19 0 0 0 1 1 1 0 0 3704.4 2734 2870 2664 6424 7378 7378 1 DDADLPR Unmodified 800.36645 0.36644643 380 A0A2I3BQB9;E9Q6A0;Q19AB2;A0A2I3BR72;Q7TPD3 Robo2 Roundabout homolog 2 yes no 0 0 0 0 1 0 1 37.095 37.095 2 0.036239 9882 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.297 22.316 118.32 69.549 72.326 66.734 0 88.478 111 74 74 65 0 83 1 1 1 1 0 1 8259.3 2735 380 2665 6425 7379 7379 1 DDAMLLK Unmodified 804.40514 0.40514012 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 59.007 59.007 2 0.027285 20293 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.925 39.758 265.89 108.66 303.78 218 347.68 305.61 250 111 297 222 352 296 2 1 2 2 2 2 21706 2736 1766 2666 6426;6427 7380;7381 7380 2 DDANNDPQWSEEQLIAAK Unmodified 2042.9181 0.91812745 3146 Q9DCL9 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 0 3 0 1 67.489 67.489 3 1.5008E-06 24666 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.184 61.549 29.987 0 9.5868 0 38.702 0 28 0 9 0 37 0 1 0 1 0 1 0 2941.1 2737 3146 2667 6428 7382 7382 1 DDAPVADGVEK Unmodified 1114.5142 0.51423288 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 2 0 1 47.106 47.106 2 0.0033002 14818 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.2 50.9 0 20.216 0 40.441 0 9.594 0 19 0 37 0 9 0 1 0 1 0 1 1275.6 2738 1318 2668 6429 7383 7383 1 DDDIAALVVDNGSGMCK Acetyl (Protein N-term);Oxidation (M);Deamidation (N) 1837.771 0.77099421 1673 P60710;E9Q1F2;E9Q5F4;E9Q2D1 Actb Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 1 1 1 0 2.14 0.639 1 4 2 82.16 82.16 2;3 5.1877E-27 31448 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.7 40.93 247.17 170.12 183.91 102.07 190.41 214.59 232 174 179 101 188 204 12 11 8 7 12 10 79106 2739 1673 2669 6430;6431;6432;6433;6434;6435;6436 7384;7385;7386;7387;7388;7389;7390;7391;7392;7393;7394;7395;7396;7397;7398;7399 7399 641 116 16 DDDIAALVVDNGSGMCK Acetyl (Protein N-term);Deamidation (N) 1821.7761 0.77607958 1673 P60710;E9Q1F2;E9Q5F4;E9Q2D1 Actb Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 1 1 0 0 5.15 4.6 2 5 6 2 5 87.103 87.103 2;3 2.7953E-121 31706 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.96 102.69 1069.1 738.47 985.68 829.6 810.59 907.55 1005 767 986 822 831 870 15 12 13 12 13 12 619200 2740 1673 2669 6437;6438;6439;6440;6441;6442;6443;6444;6445;6446;6447;6448;6449;6450;6451;6452;6453;6454;6455;6456 7400;7401;7402;7403;7404;7405;7406;7407;7408;7409;7410;7411;7412;7413;7414;7415;7416;7417;7418;7419 7411 641 20 DDDIAALVVDNGSGMCK Acetyl (Protein N-term) 1820.7921 0.792064 1673 P60710;E9Q1F2;E9Q5F4;E9Q2D1 Actb Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed yes no 1 0 0 0 6 4.18 1 1 1 1 86.377 86.377 3 2.9569E-25 29264 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.173 56.7 171.18 81.082 104.72 166.05 112.9 75.137 160 81 102 157 112 72 4 3 3 4 2 2 128840 2741 1673 2669 6457;6458;6459;6460 7420;7421;7422;7423;7424;7425 7421 6 DDEGATHEK Unmodified 1000.4098 0.40976781 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 1.5 0.5 1 1 26.499 26.499 3 0.0040101 5151 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.654 29.112 59.199 113.22 53.501 0 154.81 39.442 56 111 56 0 148 37 2 2 2 0 1 1 8270.3 2742 1220 2670 6461;6462 7426;7427 7426 2 DDEIGFRSVGLISK Unmodified 1534.7991 0.79912193 3422 yes no 0 0 0 1 9 0 1 70.176 70.176 3 0.0037706 22858 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.752 10.612 0 0 0 61.208 0 78.884 0 0 0 56 0 74 0 0 0 1 0 1 95297 + 2743 3422 2671 6463 7428 7428 1 DDEPLYIGNR Unmodified 1190.5568 0.5567664 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 2.67 0.471 1 2 52.039 52.039 2;3 0.0014893 17566 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.056 40.313 29.695 27.194 84.205 106.37 63.171 146.37 28 28 83 103 65 139 1 1 2 3 2 3 20097 2744 20;2354 2672 6464;6465;6466 7429;7430;7431 7431 3 DDESNLVEEK Unmodified 1176.5146 0.51462681 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447 Klc1 Kinesin light chain 1 yes no 0 0 0 0 1.5 0.5 1 1 49.072 49.072 2;3 0.0034251 14683 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.625 40.085 14.874 38.595 71.027 27.85 18.867 59.158 14 37 69 28 19 56 1 1 2 1 1 2 8365.8 2745 923 2673 6467;6468 7432;7433 7432 2 DDETMYVESK Unmodified 1215.4965 0.49653391 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 2 0 1 51.765 51.765 3 0.0004156 16893 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.298 62.916 69.519 0 38.037 36.965 64.305 57.861 65 0 37 37 65 56 1 0 1 1 1 1 10465 2746 2971 2674 6469 7434 7434 1 DDEVQVVR Unmodified 958.47197 0.47197413 580 B1ARA3;P61255 Rpl26 60S ribosomal protein L26 yes no 0 0 0 0 2 1 1 1 40.136 40.136 2 0.008163 11205 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.56 50.397 99.161 0 105.62 95.354 0 88.478 93 0 102 93 0 83 1 0 1 1 0 1 17547 2747 580 2675 6470;6471 7435;7436 7435 2 DDEYDYLFK Unmodified 1206.5081 0.50808487 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;E9Q6B3 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 4 0 1 72.451 72.451 2 0.025857 26476 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.91 42.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2748 1556 2676 6472 7437 7437 1 DDFLCLEGK Unmodified 1095.4907 0.49066067 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 5 0 1 69.311 69.311 2 0.021975 25043 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.283 36.769 0 48.944 0 40.441 0 69.29 0 46 0 37 0 65 0 1 0 1 0 1 5165.6 2749 928 2677 6473 7438 7438 1 DDFLGQVDVPLYPLPTENPR Unmodified 2284.1376 0.1375627 1559 P46935;V9GXK3;V9GWV8;Q3V335 Nedd4 E3 ubiquitin-protein ligase NEDD4 yes no 0 0 0 0 6 0 1 87.494 87.494 3 0.052341 32834 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 26.742 11.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2750 1559 2678 6474 7439 7439 1 DDFLQQNGYTPYDR Deamidation (N) 1731.7376 0.73764389 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 1 0 0 3 0 1 63.437 63.437 3 0.0053034 22831 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.995 40.794 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 2256.1 2751 1596 2679 6475 7440 7440 614 1 DDFNSGYR Unmodified 972.39372 0.39372381 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 4 0 1 39.875 39.875 2 0.047361 11419 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.711 29.887 60.088 0 0 70.004 55.36 0 56 0 0 65 56 0 1 0 0 1 1 0 5558.1 2752 3333 2680 6476 7441 7441 1 DDFSSGTSSR Unmodified 1057.4312 0.43123153 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 5.5 4.39 1 1 1 1 33.316 33.316 2 2.3725E-07 8084 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 140.11 65.857 88.22 91.948 170.19 166.9 150.15 86.584 83 93 167 167 148 83 2 2 4 4 3 2 51942 2753 2179 2681 6477;6478;6479;6480 7442;7443;7444;7445;7446 7446 5 DDFTEFGK Unmodified 957.40798 0.40797689 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 4 0 1 61.524 61.524 2 0.031599 21674 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.379 47.951 0 48.944 0 0 58.576 0 0 46 0 0 56 0 0 1 0 0 1 0 3385.2 2754 1972 2682 6481 7447 7447 1 DDGAAILVAVSNMVQK Unmodified 1629.8396 0.83960654 2736 Q91VD9;A0A087WSU3 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 10.7 1.7 1 1 1 92.613 92.613 3 3.0461E-05 32899 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.006 64.343 20.292 18.848 70.33 30.453 46.717 0 19 19 65 28 46 0 1 1 1 1 2 0 14816 2755 2736 2683 6482;6483;6484 7448;7449;7450 7448 3 DDGLFSGDPNWFPK Unmodified 1593.71 0.70997257 3349 Q9WVA4 Tagln2 Transgelin-2 yes yes 0 0 0 0 6 0 1 83.074 83.074 3 0.035398 30919 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.392 16.553 69.401 24.494 36.981 27.696 37.43 0 65 28 37 28 37 0 1 1 1 1 1 0 2973.7 2756 3349 2684 6485 7451 7451 1 DDGSAVIWVTFR Unmodified 1364.6725 0.67246486 2931 Q9CQI6;A0A1D5RLP1 Cotl1 Coactosin-like protein yes no 0 0 0 0 6 0 1 77.811 77.811 3 0.010689 28475 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.189 29.45 39.613 17.545 0 0 29.288 0 37 19 0 0 28 0 1 1 0 0 1 0 2961.5 2757 2931 2685 6486 7452 7452 1 DDGSWEVIEGYR Unmodified 1424.6208 0.62082322 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 5.33 3.5 2 2 1 1 66.314 66.314 2;3 1.2388E-59 23688 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 207.6 173.51 158.16 194.06 276.33 189.3 227.35 196.86 149 195 273 186 227 190 4 5 5 3 4 4 183190 2758 1458 2686 6487;6488;6489;6490;6491;6492 7453;7454;7455;7456;7457;7458 7455 6 DDHSFELDEAALNR Unmodified 1630.7223 0.72232817 2398 Q8BH66;A0A1Y7VLD6 Atl1 Atlastin-1 yes no 0 0 0 0 2 0 1 55.532 55.532 3 2.3005E-05 18641 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.614 64.583 30.044 0 0 20.767 0 20.254 28 0 0 19 0 19 1 0 0 1 0 1 8118.8 2759 2398 2687 6493 7459 7459 1 DDHYQYDR Unmodified 1110.4367 0.43665126 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 1 0 1 28.509 28.509 3 0.0044427 6068 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.679 59.841 30.044 0 0 0 37.347 39.442 28 0 0 0 37 38 1 0 0 0 1 1 2698.9 2760 3285 2688 6494 7460 7460 1 DDIGIILINQYIAEMVR Unmodified 1975.0448 0.044848288 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 0 9.25 2.28 1 1 1 1 109.97 109.97 3 1.1599E-26 36966 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 143.14 109.44 8.5369 9.2765 18.593 9.2832 16.529 14.542 8 9 18 9 16 14 2 2 3 2 2 3 8300.9 2761 3042 2689 6495;6496;6497;6498 7461;7462;7463;7464;7465 7462 5 DDKDTIEK Unmodified 962.45566 0.45565537 1759 Q3TLP8;P63001;Q05144;A0A2R8VHH0 Rac1;Rac2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 yes no 0 0 0 1 7 4.32 1 1 1 40.756 40.756 3 0.0099918 12640 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.279 29.789 688.7 339.06 281.12 633.2 427.26 821.42 645 341 270 602 437 782 3 2 1 3 2 3 41071 2762 1759 2690 6499;6500;6501 7466;7467;7468 7466 3 DDKNTMTDSTILLEDVQK Unmodified 2064.9885 0.9885152 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 1 4 0 1 69.339 69.339 3 0.00034961 25044 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.246 33.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2763 728 2691 6502 7469 7469 1 DDLITDLLNEAK Unmodified 1358.6929 0.69292553 1597 P50518;A0A0N4SW07;A0A0N4SW34 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 92.362 92.362 3 2.7829E-08 36753 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.24 70.87 61.106 8.3956 47.911 53.316 44.031 68.034 59 9 47 52 46 65 3 1 2 2 2 2 10675 2764 1597 2692 6503;6504;6505;6506 7470;7471;7472;7473 7473 4 DDLLGFSLR Unmodified 1034.5397 0.53965977 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 9.5 3.5 1 1 75.173 75.173 2 0.0057072 28448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.645 42.999 69.102 23.661 177.84 0 86.818 99.138 65 28 166 0 83 93 1 1 2 0 1 1 14776 2765 2840 2693 6507;6508 7474;7475 7475 2 DDLSLAGYQK Unmodified 1108.5401 0.5400537 3361 Q9Z0P5 Twf2 Twinfilin-2 yes yes 0 0 0 0 5 0 1 59.315 59.315 3 0.00036151 20378 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.496 56.175 0 28.828 57.684 26.461 37.486 0 0 28 56 28 37 0 0 1 1 1 1 0 2943.7 2766 3361 2694 6509 7476 7476 1 DDMIFEDCGNVPSEPK Oxidation (M) 1867.7604 0.76042952 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 1 0 2.5 0.5 1 1 61 61 3 0.00011756 21333 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.729 56.937 0 0 40.32 38.099 54.866 57.064 0 0 38 38 56 55 0 0 1 2 2 2 6375.1 2767 1369 2695 6510;6511 7477;7478 7477 83 2 DDMIFEDCGNVPSEPK Unmodified 1851.7655 0.7655149 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 0 4.6 4.22 2 2 1 66.26 66.26 3;4 3.5763E-06 24107 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.902 61.963 143.87 112.57 63.465 55.577 120.69 126.61 138 113 65 55 121 122 4 4 2 2 3 4 42208 2768 1369 2695 6512;6513;6514;6515;6516 7479;7480;7481;7482;7483 7482 5 DDNGKPYVLPSVR Deamidation (N) 1459.7307 0.73070802 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 1 0 1 6 0.707 1 2 1 54.931 54.931 3 0.00074309 18519 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.507 45.746 508.23 214.06 540.37 542.77 403.52 584.38 477 214 536 533 416 559 3 2 4 4 3 4 87319 2769 1312 2696 6517;6518;6519;6520 7484;7485;7486;7487 7484 378 4 DDNGKPYVLPSVR Unmodified 1458.7467 0.74669243 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 13 0 1 52.292 52.292 3 0.064555 17393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.378 7.5956 178.36 165.66 0 158.72 162.06 216.04 167 167 0 148 169 207 1 1 0 1 1 1 17241 2770 1312 2696 6521 7488 7488 1 DDNGVPFVR Deamidation (N) 1018.472 0.47197413 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 1 0 0 3.5 0.5 1 1 54.983 54.983 2 0.013437 19055 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.46 56.085 208.63 43.197 64.92 197.53 101.21 224.17 195 46 65 186 102 213 2 1 1 2 1 2 82430 2771 1308 2697 6522;6523 7489;7490 7489 364 2 DDNPSLPPFERPEAEAMCTSFK Unmodified 2537.1203 0.12027443 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 4.5 0.5 1 1 68.432 68.432 4 3.948E-06 24631 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.705 43.028 0 0 49.772 0 37.714 28.772 0 0 46 0 37 28 0 0 1 0 1 1 9037.5 2772 1321 2698 6524;6525 7491;7492 7492 2 DDNSVELTVAEGPYK Unmodified 1635.7628 0.76279601 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 4.5 0.5 1 1 63.862 63.862 3 3.612E-05 22583 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.433 52.594 14.798 23.173 18.036 23.739 17.263 44.279 14 23 19 23 19 42 1 1 1 1 1 1 3121.3 2773 2408 2699 6526;6527 7493;7494 7493 2 DDPLTNLNTAFDVAER Unmodified 1789.8483 0.84825697 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 8.5 4.5 1 1 78.326 78.326 3 7.7732E-06 29227 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.341 54.566 0 0 50.854 0 0 20.254 0 0 47 0 0 19 0 0 1 0 0 1 7811.3 2774 418 2700 6528;6529 7495;7496 7495 2 DDPSTIEK Unmodified 903.41854 0.41854158 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 5.5 4.39 1 1 1 1 42.802 42.802 2 0.0010168 12847 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.58 81.748 554.48 374.33 448.45 626.8 643.77 426.85 521 394 448 609 657 412 4 4 3 4 4 3 99125 2775 1676 2701 6530;6531;6532;6533 7497;7498;7499;7500 7499 4 DDQITLDEFK Unmodified 1222.5717 0.57174776 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 6.67 4.5 1 1 1 67.959 67.959 3 0.0019979 24429 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.262 41.471 0 58.672 54.567 56.218 92.406 103.65 0 56 56 56 93 102 0 1 1 1 1 2 10157 2776 1737 2702 6534;6535;6536 7501;7502;7503 7502 3 DDQLLDDGK Unmodified 1017.4615 0.46146903 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 3 0 1 53.158 53.158 2 0.012187 18053 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.643 34.921 29.731 17.582 37.638 26.743 86.024 17.799 28 19 37 28 84 19 1 1 1 1 1 1 1438.4 2777 1749 2703 6537 7504 7504 1 DDREAQSICER Unmodified 1377.5943 0.59429089 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 1 1.5 0.5 1 1 30.223 30.223 3 2.6091E-08 6801 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.97 98.561 227.25 149.78 107.11 162.74 131.93 174.26 213 158 111 157 139 167 2 3 1 2 2 2 124960 2778 1203;3123 2704 6538;6539 7505;7506;7507 7505 3 DDREDLVYQAK Unmodified 1350.6416 0.64155866 1715 P62259;D6REF3 Ywhae 14-3-3 protein epsilon yes no 0 0 0 1 3 0 1 47.262 47.262 3 0.0020388 15370 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.2 50.155 39.468 46.283 0 69.687 72.224 57.635 37 46 0 65 74 56 1 1 0 1 1 1 3957.5 2779 1715 2705 6540 7508 7508 1 DDREDQLVK Unmodified 1116.5411 0.54111633 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 1 3 0 1 40.618 40.618 3 0.041899 12288 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.278 20.344 39.257 45.698 35.826 28.469 0 0 37 46 37 28 0 0 1 1 1 1 0 0 1911 2780 761 2706 6541 7509 7509 1 DDSIPVNR Unmodified 914.44576 0.44575938 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 3 0 1 38.817 38.817 2 0.00040122 11494 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 153.73 112.07 0 87.618 41.521 67.216 72.007 67.235 0 83 46 65 74 65 0 1 1 1 1 1 9205.2 2781 2244 2707 6542 7510 7510 1 DDSPDLPK Unmodified 885.40798 0.40797689 656 CON__P02769 yes yes 0 0 0 0 3 0 1 46.94 46.94 2 0.031599 15164 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.379 33.821 9.027 47.234 65.854 35.838 36.066 28.819 9 46 65 37 37 28 1 1 1 1 1 1 3125.2 + 2782 656 2708 6543 7511 7511 1 DDSVEGLR Unmodified 889.41412 0.4141249 2764 Q91XD6 Vps36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 0 1 0 1 40.363 40.363 2 0.044487 11257 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.88 17.844 39.564 27.124 0 19.898 46.222 28.529 37 28 0 19 46 28 1 1 0 1 1 1 4827.4 2783 2764 2709 6544 7512 7512 1 DDSYRPIVDYIDAQFENYLQEELK Unmodified 2962.3872 0.38724804 575 B1AQY9;B1AQZ0;Q8CHH9 Sept8 Septin-8 yes no 0 0 0 1 9.5 3.5 1 1 103.46 103.46 4 4.2295E-13 37654 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.987 61.34 10.73 19.914 18.063 29.198 22.577 34.534 10 19 19 28 24 33 1 1 1 1 2 2 2580 2784 575 2710 6545;6546 7513;7514 7513 2 DDTDDEIAK Unmodified 1020.4247 0.42474917 1523 P35564 Canx Calnexin yes yes 0 0 0 0 1 0 2 43.765 43.765 2;3 0.0008516 12445 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.71 94.926 88.542 102.56 0 88.849 157.51 76.52 83 102 0 84 157 74 2 2 0 2 2 1 11893 2785 1523 2711 6547;6548 7515;7516 7515 2 DDTESLEIFQNEVAR Unmodified 1764.8166 0.81662249 3046 Q9D1Q6 Erp44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 0 2 0 1 71.159 71.159 3 0.00071498 25780 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.68 49.759 0 0 20.558 0 0 9.594 0 0 19 0 0 9 0 0 1 0 0 1 2109.3 2786 3046 2712 6549 7517 7517 1 DDTLHETEDVK Unmodified 1300.5783 0.5782897 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 2.2 0.748 1 2 2 42.509 42.509 3;4 1.0852E-08 13040 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 121.29 92.663 405.43 383.36 64.163 292.22 394.66 552.65 380 387 65 277 404 529 5 5 1 4 4 6 120950 2787 2919 2713 6550;6551;6552;6553;6554 7518;7519;7520;7521;7522;7523 7520 6 DDTLHETEDVKEAIR Unmodified 1769.8432 0.84317159 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 3 0 1 52.715 52.715 4 0.0082584 17941 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.457 23.872 39.355 26.542 35.64 58.425 35.027 28.848 37 28 37 56 37 28 1 1 1 1 1 1 5170.2 2788 2919 2714 6555 7524 7524 1 DDTSFVFTLTDKDTGVTR Unmodified 2016.964 0.96401501 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 1 6 0 1 72.004 72.004 3 0.0042045 25748 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.623 33.098 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2789 204 2715 6556 7525 7525 1 DDVPFFGPPLPDPAVFR Unmodified 1884.941 0.94103514 488;489 A2ALS5;A2ALS4;A2ALS7 Rap1gap Rap1 GTPase-activating protein 1 no no 0 0 0 0 7 0 1 92.48 92.48 3 8.9341E-05 34277 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.507 44.767 0 9.4296 8.7573 9.3151 0 14.924 0 9 9 9 0 14 0 1 1 1 0 1 2257.9 2790 488;489 2716 6557 7526 7526 1 DDVQGYAAK Unmodified 965.44543 0.44542503 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 5 0 1 44.111 44.111 2 0.0056753 13178 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.749 30.895 79.059 0 57.656 56.96 43.162 68.058 74 0 56 56 46 65 1 0 1 1 1 1 9109.7 2791 1400;1401 2717 6558 7527 7527 1 DEAEMSSWLR Unmodified 1222.5288 0.52883709 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 13 0 1 63.711 63.711 2 0.048196 22973 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.867 30.154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2792 2186 2718 6559 7528 7528 1 DEAHVSDEFSK Unmodified 1262.5415 0.54151026 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 3 0 1 45.079 45.079 4 0.011014 14368 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.741 24.89 0 38.758 36.465 27.923 27.007 29.077 0 37 37 28 28 28 0 1 1 1 1 1 2036.5 2793 2886 2719 6560 7529 7529 1 DEALDEENKPGGQQDK Unmodified 1771.7861 0.78605064 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 3 0.816 1 1 1 43.503 43.503 4 5.0062E-05 13506 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.134 45.341 137.56 117.67 64.34 137.77 129.85 164.76 129 120 65 130 130 157 2 2 2 2 2 2 15532 2794 510 2720 6561;6562;6563 7530;7531;7532 7530 3 DEASSVEVTWPDGK Unmodified 1518.6838 0.6838174 2669 Q8R555 Crtac1 Cartilage acidic protein 1 yes yes 0 0 0 0 4 0 1 62.669 62.669 3 0.0013694 22330 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.136 28.97 20.244 28.427 0 30.11 26.247 48.287 19 28 0 28 28 46 1 1 0 1 1 1 12428 2795 2669 2721 6564 7533 7533 1 DEAVYQAIHEGIQR Unmodified 1627.7954 0.79543354 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 4.5 0.5 1 1 56.833 56.833 3 0.00011987 19213 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.541 65.709 0 0 0 50.278 0 49.036 0 0 0 46 0 46 0 0 0 1 0 1 14418 2796 2890 2722 6565;6566 7534;7535 7535 2 DECPEVR Unmodified 903.37563 0.37563091 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 13 0 1 30.614 30.614 2 0.023644 6921 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.77 62.201 0 57.992 95.215 43.362 65.998 0 0 56 93 46 65 0 0 1 1 1 1 0 3802.1 2797 2272 2723 6567 7536 7536 1 DEDILQVLQFTK Unmodified 1447.7559 0.75586013 48 A0A0A0MQE8;B7ZCJ1 Arhgap21 yes no 0 0 0 0 7 0 1 88.833 88.833 3 0.0019545 32798 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.951 41.061 20.207 0 30.194 0 0 29.848 19 0 28 0 0 28 1 0 1 0 0 1 865.13 2798 48 2724 6568 7537 7537 1 DEDITEYQSILAAAVK Unmodified 1764.8782 0.87816011 3148 Q9DCM2 Gstk1 Glutathione S-transferase kappa 1 yes yes 0 0 0 0 5 0 1 84.898 84.898 3 0.021006 32346 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.993 17.918 0 0 0 30.604 0 39.442 0 0 0 28 0 37 0 0 0 1 0 1 1718.8 2799 3148 2725 6569 7538 7538 1 DEFEGLFK Unmodified 983.46001 0.46001246 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 5.5 0.5 1 1 72.701 72.701 3 0.0040307 26002 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.923 39.131 0 48.944 0 60.557 91.877 76.262 0 46 0 56 93 74 0 1 0 1 2 2 19733 2800 1876 2726 6570;6571 7539;7540 7540 2 DEFPEVYVPTVFENYVADIEVDGK Unmodified 2773.3011 0.30105879 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 0 5 0 1 103.81 103.81 4 1.4536E-15 36203 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.039 41.276 6.3915 4.8267 3.729 6.2231 5.9901 0 6 5 4 6 6 0 1 1 1 1 1 0 1310.3 2801 1733 2727 6572 7541 7541 1 DEGANAFFK Deamidation (N) 998.43453 0.434526 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 1 0 0 4 0 1 59.205 59.205 2 0.060626 20697 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.913 35.197 0 28.808 58.864 0 56.948 47.411 0 28 56 0 56 46 0 1 1 0 1 1 6190.2 2802 1585 2728 6573 7542 7542 1 DEGANAFFK Unmodified 997.45051 0.45051041 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 59.184 59.184 2;3 0.0006489 19715 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.12 74.401 245.91 464.18 519.01 375.02 220.46 428.64 232 460 522 371 233 408 3 5 5 4 3 4 104490 2803 1585 2728 6574;6575;6576;6577 7543;7544;7545;7546;7547 7545 5 DEHLELR Unmodified 910.45084 0.45084476 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 2.5 0.5 1 1 37.236 37.236 3 0.018218 10727 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.799 36.992 0 98.498 27.141 47.969 94.859 36.735 0 93 28 47 94 37 0 2 1 2 2 2 9945.9 2804 510 2729 6578;6579 7548;7549 7549 2 DEILPTTPISEQK Unmodified 1469.7613 0.76133944 1755 P62908 Rps3 40S ribosomal protein S3 yes yes 0 0 0 0 5 0 1 63.975 63.975 3 2.4047E-13 22528 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.41 75.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2805 1755 2730 6580 7550 7550 1 DEINETDLK Unmodified 1075.5033 0.50333384 1348 P10852;A0A0U1RP98;A0A0U1RPL8 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 3 0 1 51.421 51.421 2 0.0028681 17373 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.096 32.123 0 0 45.839 88.295 41.721 68.099 0 0 46 84 46 65 0 0 1 1 1 1 3105.6 2806 1348 2731 6581 7551 7551 1 DEITEWESR Unmodified 1163.5095 0.50948185 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 0 1.5 0.5 1 1 54.978 54.978 2 0.0033779 17048 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.059 49.392 0 0 40.034 0 56.581 58.081 0 0 37 0 56 56 0 0 1 0 1 1 8403 2807 2207 2732 6582;6583 7552;7553 7552 2 DELSLEDSSR Unmodified 1149.515 0.51496116 1133 P83093;I1E4X8;F6WBP9 Stim2 Stromal interaction molecule 2 yes no 0 0 0 0 1 0 1 47.3 47.3 2 0.028139 14114 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.55 23.999 0 29.792 0 40.441 0 0 0 28 0 37 0 0 0 1 0 1 0 0 1680.6 2808 1133 2733 6584 7554 7554 1 DENATLDGGDVLFTGR Deamidation (N) 1679.7639 0.76385864 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 1 0 0 2 0 1 66.932 66.932 3 0.011048 24107 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.422 19.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2809 2980 2734 6585 7555 7555 1035 1 DENATLDGGDVLFTGR Unmodified 1678.7798 0.77984305 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 4 0 1 66.74 66.74 3 1.3812E-06 23894 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.36 72.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4377.4 2810 2980 2734 6586 7556 7556 1 DEPDWESLIFLAR Unmodified 1589.7726 0.77257283 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 5.5 0.5 1 1 93.314 93.314 3 0.0013156 35014 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.57 50.282 9.657 0 0 9.6743 8.6486 18.347 9 0 0 9 9 18 1 0 0 1 1 2 1499.9 2811 1925 2735 6587;6588 7557;7558 7557 2 DEPQEPTNK Unmodified 1056.4724 0.47236807 1009 F6ZDS4;Q7M739;F6RX08 Tpr Nucleoprotein TPR yes no 0 0 0 0 2 0 1 35.49 35.49 3 0.0053664 9699 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.216 46.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2812 1009 2736 6589 7559 7559 1 DEQSHVGAAPALR Unmodified 1349.6688 0.66877646 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 0 3 0.816 1 1 1 35.311 35.311 3 0.00044167 9246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.519 50.046 20.136 28.127 18.379 66.821 27.906 39.442 19 28 19 65 28 37 1 1 1 3 1 1 15623 2813 896 2737 6590;6591;6592 7560;7561;7562 7562 3 DESGLNR Unmodified 789.3617 0.3616954 410;3398;1477 A0A338P6R8;A0A338P769;A0A338P755;P28661;Q5ND13;Q5ND09;Q9Z2Q6;B7ZNM7;A0A338P729 Sept4;Sept5 Septin-4;Septin-5 no no 0 0 0 0 4.75 4.82 1 1 1 1 27.651 27.651 2 1.1592E-05 6289 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 164 67.486 803.76 716.98 904.4 914.24 1504.3 964.52 757 739 917 908 1510 943 3 4 4 3 4 3 196350 2814 410;1477;3398 2738 6593;6594;6595;6596 7563;7564;7565;7566 7565 4 DESGLNRK Unmodified 917.45666 0.45665842 410;3398;1477 A0A338P6R8;A0A338P769;A0A338P755;P28661;Q5ND13;Q5ND09;Q9Z2Q6;B7ZNM7;A0A338P729 Sept4;Sept5 Septin-4;Septin-5 no no 0 0 0 1 13 0 1 30.706 30.706 3 0.015673 6911 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.877 23.842 0 0 260.62 197.6 0 233.45 0 0 249 195 0 219 0 0 1 1 0 1 23841 2815 410;1477;3398 2739 6597 7567 7567 1 DESKEPIVEVR Unmodified 1299.667 0.66704513 74;1367;71;949 A0A0A6YY47;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 3 0 1 46.097 46.097 3 0.0044445 14880 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.932 40.152 0 96.28 159.86 119.4 176.81 113.28 0 93 158 121 178 111 0 1 1 1 1 1 11825 2816 71;74;949;1367 2740 6598 7568 7568 1 DESYQFK Unmodified 915.39741 0.39741221 1916 Q3TDK6;A0A0J9YUG1 Rogdi Protein rogdi homolog yes no 0 0 0 0 5 0 1 49.05 49.05 3 0.025861 15537 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.358 36.93 39.342 0 60.394 0 37.384 38.375 37 0 56 0 37 37 1 0 1 0 1 1 1722.5 2817 1916 2741 6599 7569 7569 1 DETEFYLGK Unmodified 1100.5026 0.50260556 1241 O55142 Rpl35a 60S ribosomal protein L35a yes yes 0 0 0 0 5 0 1 63.447 63.447 2 0.0035272 22366 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.516 41.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2818 1241 2742 6600 7570 7570 1 DETGELSSADEKR Unmodified 1435.6427 0.64268087 3168 Q9EPU0 Upf1 Regulator of nonsense transcripts 1 yes yes 0 0 0 1 2 0 1 39.357 39.357 3 0.011818 11585 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.145 31.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2819 3168 2743 6601 7571 7571 1 DETLETEK Unmodified 963.43967 0.43967095 1691 P61164 Actr1a Alpha-centractin yes yes 0 0 0 0 2 0 1 43.562 43.562 2 0.047919 13392 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.485 22.91 0 59.002 34.785 38.368 0 0 0 56 37 37 0 0 0 1 1 1 0 0 1957.5 2820 1691 2744 6602 7572 7572 1 DETNYGIPQR Unmodified 1191.552 0.55201537 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 6.67 4.5 1 1 1 43.429 43.429 2 0.0094526 13554 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.334 43.541 29.635 36.74 116.59 25.901 38.702 0 28 37 111 28 37 0 1 1 2 1 1 0 23033 2821 1792 2745 6603;6604;6605 7573;7574;7575 7573 3 DETVENPHLQK Unmodified 1308.631 0.63099397 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 6.67 4.5 1 1 1 41.294 41.294 3 0.00029059 12772 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.197 53.169 48.682 55.185 156.58 0 0 176.96 46 56 148 0 0 166 1 1 2 0 0 2 13677 2822 2511 2746 6606;6607;6608 7576;7577;7578 7576 3 DEVDGGPAGPPGGAAK Unmodified 1393.6474 0.64737232 2713 Q8VEK0;D3YVV1 Tmem30a Cell cycle control protein 50A yes no 0 0 0 0 3.5 0.5 1 1 44.585 44.585 3 5.9843E-05 13682 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.246 50.98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2823 2713 2747 6609;6610 7579;7580 7580 2 DEVQEVVYFPAVDHDAESK Unmodified 2175.996 0.99604342 3001 Q9CZC8;D3YXW0 Scrn1 Secernin-1 yes no 0 0 0 0 3.33 0.471 2 1 66.524 66.524 3;4 1.3089E-10 24188 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.47 94.164 88.542 37.629 83.607 106.35 35.304 126.91 83 38 83 102 37 120 3 2 3 2 1 3 33911 2824 3001 2748 6611;6612;6613 7581;7582;7583;7584 7583 4 DEVSESR Unmodified 820.35628 0.35627567 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 13 0 1 24.726 24.726 2 0.013249 4101 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.11 68 30.044 0 0 20.249 27.543 23.732 28 0 0 19 28 23 1 0 0 1 1 1 2859.7 2825 1329 2749 6614 7585 7585 1 DEYIEQLK Unmodified 1036.5077 0.50769094 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 5 0 1 59.508 59.508 3 0.034253 20530 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.346 23.172 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2826 178 2750 6615 7586 7586 1 DEYLLEEAQQR Unmodified 1392.6521 0.65212334 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 2 0 1 57.437 57.437 2 0.00010751 19500 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.456 60.763 0 0 28.586 38.397 18.11 0 0 0 28 37 19 0 0 0 1 1 1 0 2636.3 2827 490 2751 6616 7587 7587 1 DFAPGKPLK Unmodified 971.54402 0.54401687 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 9.33 2.62 1 1 1 51.438 51.438 3 0.0021098 15400 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.657 57.816 1957.5 1432 1976.8 1249.8 1668.8 1696.7 1842 1501 1967 1280 1706 1628 4 4 4 4 4 3 189480 2828 2843 2752 6617;6618;6619 7588;7589;7590;7591 7588 4 DFASEVSNVLNK Unmodified 1321.6514 0.65139506 1807 P70297;Q3UGN9;A2ARJ0 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 7 0 1 75.389 75.389 2 0.011871 26425 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.836 27.852 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2829 1807 2753 6620 7592 7592 1 DFDCIITEFAK Unmodified 1357.6224 0.62240312 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 85.435 85.435 2;3 8.7256E-13 31920 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143.96 112.09 127.67 71.218 141.16 86.262 113.42 77.021 120 74 140 83 111 74 3 2 4 2 2 2 19445 2830 3210 2754 6621;6622;6623;6624 7593;7594;7595;7596 7593 4 DFEEYPEHR Unmodified 1220.5098 0.5098162 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 1 0 1 40.038 40.038 3 0.0093659 11195 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.432 44.838 29.85 38.419 0 20.767 0 0 28 38 0 19 0 0 1 1 0 1 0 0 1609.8 2831 2222 2755 6625 7597 7597 1 DFFFELEPLPGAVEAVK Unmodified 1906.9717 0.97166657 2682 Q8VCE6 Nt5m 5'(3')-deoxyribonucleotidase, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 96.074 96.074 3 0.00020917 35429 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.407 37.574 0 6.2368 66.361 12.591 0 28.782 0 6 65 12 0 27 0 1 3 1 0 2 3900.1 2832 2682 2756 6626;6627;6628 7598;7599;7600 7599 3 DFFLGELEK Unmodified 1096.5441 0.54407645 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 0 7 0 1 79.093 79.093 3 0.026695 28207 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.606 18.593 20.267 0 20.086 8.3046 17.826 48.527 19 0 19 9 19 46 1 0 1 1 1 1 1312.2 2833 1894 2757 6629 7601 7601 1 DFFSMKPEWENLNQSNVR Unmodified 2240.0321 0.03205177 2727 Q91V14 Slc12a5 Solute carrier family 12 member 5 yes yes 0 0 0 1 8.5 0.5 1 1 73.634 73.634 3 1.4156E-07 25032 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.944 58.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2834 2727 2758 6630;6631 7602;7603 7602 2 DFFTAGSPGETAFR Unmodified 1501.6838 0.68375782 1653 P58281 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes yes 0 0 0 0 6 0 1 67.87 67.87 3 0.01351 23746 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.568 29.801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2835 1653 2759 6632 7604 7604 1 DFGNSPLHR Unmodified 1041.4992 0.49919194 2780 Q91Z31 Ptbp2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 0 6 0 1 40.152 40.152 3 0.0036492 10771 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.299 27.336 99.624 32.65 0 49.219 56.315 0 93 37 0 46 56 0 1 1 0 1 1 0 3650.9 2836 2780 2760 6633 7605 7605 1 DFGSFEK Unmodified 828.36538 0.3653838 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 57.333 57.333 2 0.003356 18965 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 150.17 39.553 901.82 761.64 1073.3 622.9 1005.8 1068.2 850 772 1064 628 1024 1029 2 1 2 1 2 2 115470 2837 1336 2761 6634;6635 7606;7607 7606 2 DFIDSVLVK Unmodified 1034.5648 0.56481189 2058 Q5SRX1;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 7.5 0.5 1 1 78.267 78.267 2;3 3.5605E-18 27159 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 146.81 80.552 49.07 0 48.32 27.044 36.141 38.411 46 0 46 28 37 37 1 0 1 1 1 1 4233.1 2838 2058 2762 6636;6637 7608;7609 7609 2 DFIHTASLSFLTPLR Unmodified 1716.9199 0.91990577 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 11 0 1 80.396 80.396 3 1.029E-22 24783 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.64 117.14 0 0 80.068 0 69.533 76.9 0 0 74 0 69 74 0 0 1 0 1 1 34522 2839 533 2763 6638 7610 7610 1 DFIWGVIGK Unmodified 1033.5597 0.55966693 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 9.5 0.5 1 1 84.254 84.254 2;3 0.0026396 26731 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.114 44.756 68.917 63.081 85.674 9 55.592 86.892 65 65 83 9 56 83 1 1 1 1 1 1 9662.7 2840 1388 2764 6639;6640 7611;7612 7612 2 DFIYVSQDPK Unmodified 1210.587 0.58700389 2834 Q99JY0 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 0 6 0 1 62.374 62.374 2 4.6808E-05 21225 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.898 56.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2841 2834 2765 6641 7613 7613 1 DFKPGDLIFAK Unmodified 1249.6707 0.67067394 541 Q99JF8;A2BI12;F6RB63 Psip1 PC4 and SFRS1-interacting protein yes no 0 0 0 1 8 0 1 71.982 71.982 3 0.0032172 24218 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.538 32.159 157.91 176.62 0 131.16 0 0 148 176 0 120 0 0 1 1 0 1 0 0 10716 2842 541 2766 6642 7614 7614 1 DFKVDQEIMNIIQER Unmodified 1876.9353 0.93529784 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 1 6 0 1 81.9 81.9 3 0.0020561 30311 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.549 39.61 0 0 49.772 0 0 49.036 0 0 46 0 0 46 0 0 1 0 0 1 4587.4 2843 3151 2767 6643 7615 7615 1 DFLAGGIAAAVSK Unmodified 1218.6608 0.66083754 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 10.4 1.59 1 1 2 1 1 1 75.902 75.902 2;3 5.0481E-27 23037 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 172.92 78.307 532.52 501.98 1084.5 795.63 699.32 892.86 500 500 1053 778 722 851 6 8 10 6 8 6 478550 2844 1585 2768 6644;6645;6646;6647;6648;6649;6650 7616;7617;7618;7619;7620;7621;7622;7623;7624;7625;7626;7627 7621 12 DFLAGGVAAAISK Unmodified 1218.6608 0.66083754 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 8.71 3.49 1 1 2 1 1 1 74.953 74.953 2;3 4.9649E-21 24871 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 158.4 72.586 698.75 496.11 476.18 673.29 388.6 525.83 656 513 476 637 396 499 7 7 5 6 4 6 258550 2845 1607 2769 6651;6652;6653;6654;6655;6656;6657 7628;7629;7630;7631;7632;7633;7634;7635;7636 7632 9 DFLDEYIFLAVGR Unmodified 1556.7875 0.78749461 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 7 0 1 99.784 99.784 3 0.012215 36432 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.382 29.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 807.86 2846 2146 2770 6658 7637 7637 1 DFLIPIGK Unmodified 901.5273 0.52730417 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 76.731 76.731 2 0.0051541 29101 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.6 46.181 956.56 782.4 957.41 577.94 867.27 917.24 900 811 951 585 879 887 5 6 5 3 5 6 258540 2847 3016 2771 6659;6660;6661;6662;6663 7638;7639;7640;7641;7642;7643;7644 7644 7 DFLLKPELLR Unmodified 1242.7336 0.73360855 3379 Q9Z1N5;Q8VDW0;D6RHT5 Ddx39b;Ddx39a;Ddx39 Spliceosome RNA helicase Ddx39b;ATP-dependent RNA helicase DDX39A yes no 0 0 0 1 8 0 1 72.222 72.222 3 0.033292 24306 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.727 19.856 78.984 82.986 0 0 75.098 67.147 74 83 0 0 74 65 1 1 0 0 1 1 6995.7 2848 3379 2772 6664 7645 7645 1 DFLLQQTMLR Unmodified 1263.6645 0.66454271 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 8.5 0.5 1 1 73.15 73.15 2 0.0063757 24104 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.922 33.912 59.611 168.74 231.06 92.658 195.45 246 56 166 227 88 199 236 1 2 2 1 2 2 32400 2849 2897 2773 6665;6666 7646;7647 7647 2 DFLLVYNR Unmodified 1038.5498 0.54983053 3346 Q9WV96;D3YVK5;A0A1B0GSU2;D3YVK4;A0A1B0GRP8 Timm10b Mitochondrial import inner membrane translocase subunit Tim10 B yes no 0 0 0 0 8 0 1 69.089 69.089 2 0.024073 22906 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.492 46.553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2850 3346 2774 6667 7648 7648 1 DFLPLYFGWFLTK Unmodified 1645.8545 0.85445197 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8.67 5.44 1 1 1 111.86 111.86 3 2.4415E-05 44428 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.32 56.778 75.929 11.553 77.223 43.472 103.4 49.902 71 11 74 45 101 47 4 1 5 4 5 3 29158 2851 1390 2775 6668;6669;6670 7649;7650;7651;7652;7653;7654;7655 7653 7 DFLTPPLLSVR Unmodified 1256.7129 0.71287311 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 10.8 1.48 1 1 1 1 80.821 80.821 2 1.6391E-14 25537 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 160.53 111.73 277 258.17 302.52 451.55 461.14 263.37 260 260 296 435 464 250 4 4 2 5 6 3 81246 2852 1400 2776 6671;6672;6673;6674 7656;7657;7658;7659;7660;7661;7662 7659 7 DFMAALEAEPYDDIVGETVEK Unmodified 2341.0672 0.067159452 1464 P27546;Q78TF3 Map4 Microtubule-associated protein 4 yes no 0 0 0 0 7.33 4.03 1 1 1 91.825 91.825 3 2.7328E-11 33983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.269 83.341 0 29.315 37.862 9.2813 0 29.848 0 28 37 9 0 28 0 1 2 1 0 1 6553.7 2853 1464 2777 6675;6676;6677 7663;7664;7665 7663 3 DFNDTSQDPDFTQVVELDLK Unmodified 2325.0649 0.064851266 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 4 0 1 86.258 86.258 3 2.4959E-09 32825 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.207 58.085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2854 1472 2778 6678 7666 7666 1 DFNHINVELSLLGK Unmodified 1597.8464 0.84640648 242 A0A140T8T4;P51410;A0A0G2JES3;D3YZT0;D3Z629;A0A0G2JFQ3;S4R1R7 Rpl9;Rpl9-ps1 60S ribosomal protein L9 yes no 0 0 0 0 7 0 1 76.576 76.576 3 0.0069876 27038 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.723 28.298 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2554.1 2855 242 2779 6679 7667 7667 1 DFNMTGWAYK Unmodified 1231.5332 0.53319418 2015 Q3UYC0 Ppm1h Protein phosphatase 1H yes yes 0 0 0 0 8 0 1 71.995 71.995 3 0.0083126 24240 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.094 30.877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2856 2015 2780 6680 7668 7668 1 DFNVGDYIEAVLDR Unmodified 1624.7733 0.77330111 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 6 0.816 1 1 1 98.354 98.354 3 0.00013079 35798 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.197 51.784 5 26.557 2.5803 6.4042 0 23.452 5 25 3 6 0 22 1 2 1 1 0 2 5661.4 2857 2555 2781 6681;6682;6683 7669;7670;7671 7669 3 DFNVGGYIQAVLDR Unmodified 1565.7838 0.78380622 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 7.5 0.5 1 1 90.08 90.08 3 0.00025965 32578 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.751 42.21 18.4 28.844 18.78 0 0 0 18 28 19 0 0 0 2 1 1 0 0 0 2957.1 2858 3331 2782 6684;6685 7672;7673 7673 2 DFPDQHH Unmodified 894.36203 0.36202975 499 A2AP32;Q3UIU2 Ndufb6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 0 0 0 2.5 0.5 1 1 30.314 30.314 3 0.015972 7687 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.915 50.184 39.613 46.687 38.86 40.102 37.229 39.96 37 47 37 37 38 38 1 3 1 1 2 2 8245.8 2859 499 2783 6686;6687 7674;7675;7676 7676 3 DFPELTMEVDGK Oxidation (M) 1395.6228 0.62279705 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 1 0 4 0 1 68.286 68.286 3 0.00016005 24557 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.001 64.803 0 19.403 48.608 0 0 0 0 19 46 0 0 0 0 1 1 0 0 0 2671.1 2860 1596 2784 6688 7677 7677 107 1 DFPELTMEVDGK Unmodified 1379.6279 0.62788243 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 7 3.54 1 1 1 1 74.088 74.088 2;3 3.2414E-12 26741 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.39 84.38 198.53 92.298 295.17 160.48 267.08 222.38 186 93 278 158 269 214 4 3 4 4 5 4 45723 2861 1596 2784 6689;6690;6691;6692 7678;7679;7680;7681;7682;7683 7680 6 DFPGLSDDYYGAK Unmodified 1446.6303 0.63032527 538 Q52KF7;A2BEE9;P70175 Dlg3 Disks large homolog 3 yes no 0 0 0 0 5 0 1 69.462 69.462 3 0.0012608 25120 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.898 40.575 68.87 62.951 93.63 64.475 52.627 86.976 65 65 93 65 56 83 1 1 1 1 1 1 5752.1 2862 538 2785 6693 7684 7684 1 DFPGSEPYHSAESK Unmodified 1549.6685 0.66850169 1477 P28661;Q5ND09;Q5ND18 Sept4 Septin-4 yes no 0 0 0 0 4.5 0.5 1 1 46.254 46.254 3 0.00030325 14476 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.262 54.532 29.81 58.673 93.787 95.408 34.636 68.302 28 56 94 93 37 65 1 1 2 2 1 1 9814.6 2863 1477 2786 6694;6695 7685;7686 7685 2 DFPIANGDR Deamidation (N) 1004.4563 0.45632407 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 1 0 0 5.33 3.5 2 2 1 1 52.626 52.626 2 2.2065E-07 17581 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 168.26 116.92 609.19 724.98 706.85 623.64 882.32 886.25 572 730 722 619 900 855 3 4 5 4 5 5 186710 2864 1296 2787 6696;6697;6698;6699;6700;6701 7687;7688;7689;7690;7691;7692;7693 7690 353 7 DFPLNDLLSATELDKIR Unmodified 1959.0313 0.031306713 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 7 0 1 87.676 87.676 3 8.291E-05 32240 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.024 59.065 20.292 18.848 0 0 0 29.848 19 19 0 0 0 28 1 1 0 0 0 1 1450.9 2865 3204 2788 6702 7694 7694 1 DFPLTGYVELR Unmodified 1308.6714 0.67140222 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 6.33 0.471 2 1 75.581 75.581 2;3 7.4208E-08 26442 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.57 52.915 78.882 102.65 33.689 107.04 35.885 98.114 74 102 37 102 37 93 1 2 1 3 1 2 33645 2866 3152 2789 6703;6704;6705 7695;7696;7697 7697 3 DFPQYFAVVSR Unmodified 1327.6561 0.65608651 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R1U4;S4R2F3;Q8C8R3;S4R2R5;S4R2T7 Ank3;Ank2 Ankyrin-3;Ankyrin-2 no no 0 0 0 0 8 0 1 72.556 72.556 2 5.1788E-05 24474 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.215 65.419 109.13 61.801 0 80.882 0 108.73 102 65 0 74 0 102 1 1 0 1 0 1 20796 2867 3450;3449;3451;3452 2790 6706 7698 7698 1 DFQEPLPQK Unmodified 1100.5502 0.55022446 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5 0 1 56.383 56.383 2 0.0016322 18904 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.815 67.495 0 0 0 29.375 65.35 37.577 0 0 0 28 65 37 0 0 0 1 1 1 12493 2868 510 2791 6707 7699 7699 1 DFQEYVEPGEDFPASPQR Unmodified 2109.928 0.92796385 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 4 0 1 68.422 68.422 3 0.0016423 24638 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.848 24.777 0 0 48.112 37.257 16.824 38.962 0 0 46 37 19 37 0 0 1 1 1 1 4211.3 2869 2646 2792 6708 7700 7700 1 DFQLFSSPLGK Unmodified 1237.6343 0.63428844 2797 Q921I1;E9Q035;E9Q2Q7 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 9 0 1 79.048 79.048 3 0.027867 26889 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.095 15.497 59.489 43.87 63.555 86.278 34.739 0 56 46 65 83 37 0 1 1 1 1 1 0 5499.5 2870 2797 2793 6709 7701 7701 1 DFQSGQHVMVR Unmodified 1302.6139 0.61390412 1554 P46460;G3UX98 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 5.5 0.5 1 1 39.62 39.62 3 1.2908E-08 10505 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.84 78.434 187.63 88.182 129.77 170.7 217.83 220.84 176 93 130 167 223 213 2 1 1 2 2 2 35426 2871 1554 2794 6710;6711 7702;7703 7703 2 DFQWTDNTGLQYENWR Unmodified 2071.9024 0.90241781 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 8 3.56 1 1 1 75.761 75.761 3 0.00038074 28775 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.618 43.952 129 108.61 47.632 98.064 137.8 115.5 121 111 47 93 139 111 3 3 2 2 2 1 14590 2872 144 2795 6712;6713;6714 7704;7705;7706 7706 3 DFQYVDR Unmodified 941.4243 0.42429566 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 5 0 1 47.383 47.383 2 0.032395 14708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.368 42.139 69.42 64.479 0 78.038 151.22 0 65 65 0 74 148 0 1 1 0 1 1 0 10904 2873 2324 2796 6715 7707 7707 1 DFSATDLTEFAAR Unmodified 1442.6678 0.66777341 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 72.555 72.555 2;3 1.1593E-36 26539 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 155.33 114.9 0 0 9.738 0 19.874 9 0 0 9 0 19 9 0 0 1 0 1 1 3730.7 2874 2472 2797 6716;6717;6718;6719 7708;7709;7710;7711 7709 4 DFSGTSDPFVK Unmodified 1198.5506 0.55061839 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 0 6 0 1 64.216 64.216 3 0.00049987 21875 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.201 53.083 50.201 45.559 0 30.604 0 49.036 47 46 0 28 0 46 1 1 0 1 0 1 7119.1 2875 355 2798 6720 7712 7712 1 DFTATFGPLDSLNTR Unmodified 1653.7999 0.79985021 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 78.079 78.079 2;3 5.2057E-11 27137 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.39 77.024 40.284 27.962 58.711 0 37.384 38.375 38 28 56 0 37 37 2 1 2 0 1 1 9148.4 2876 974 2799 6721;6722 7713;7714 7714 2 DFTPAAQAAFQK Unmodified 1293.6354 0.63535107 562;1299 A8DUK4;P02088;P02089 Hbbt1;Hbb-b1;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 0 0 0 8.6 2.42 1 1 1 1 1 61.845 61.845 3 3.8894E-27 20192 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 171.74 131.41 1295.4 903.67 1427.8 679.69 1227.5 1169.6 1219 913 1410 666 1233 1130 6 4 7 3 4 6 364000 2877 562;1299 2800 6723;6724;6725;6726;6727 7715;7716;7717;7718;7719;7720;7721 7716 7 DFTPAELR Unmodified 947.47125 0.47124585 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 0 4.5 0.5 1 1 53.95 53.95 2 0.0012571 17863 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.97 82.159 187.38 153.52 117 130.58 241.24 141.29 176 158 120 130 241 139 2 2 1 2 2 2 38208 2878 1228 2801 6728;6729 7722;7723 7723 2 DFTPSGIAGAFR Unmodified 1237.6091 0.60913632 1630 P56135;F8WHP8 Atp5j2 ATP synthase subunit f, mitochondrial yes no 0 0 0 0 7.67 0.471 1 2 69.44 69.44 2;3 1.685E-07 23037 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.95 72.595 180.17 112.53 243.03 226.05 112.26 272.11 169 121 241 222 120 260 1 2 2 2 1 3 43693 2879 1630 2802 6730;6731;6732 7724;7725;7726 7725 3 DFTPVCTTELGR Unmodified 1394.65 0.65001485 2194 Q6GT24;D3Z0Y2;O08709;Q8BG37 Prdx6;Prdx6b Peroxiredoxin-6 yes no 0 0 0 0 7.75 3.11 1 1 1 1 58.656 58.656 2 9.1617E-18 19502 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 146.17 91.559 245.79 150.99 391.74 228.99 205.38 458.92 231 158 381 222 204 436 3 2 4 3 2 4 91305 2880 2194 2803 6733;6734;6735;6736 7727;7728;7729;7730 7728 4 DFTPVPWSQYFESMEDVEVENETGKDTFR Unmodified 3481.5296 0.52963153 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 1 6 0 1 91.8 91.8 4 0.002403 34722 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.558 26.749 0 0 0 9.5792 13.705 14.533 0 0 0 9 14 14 0 0 0 1 1 1 1703.8 2881 2465 2804 6737 7731 7731 1 DFTSEQIDEILQNHTEIVFAR Deamidation (N) 2505.2023 0.2023478 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 0 4.33 0.471 2 1 81.433 81.433 3;4 2.0007E-10 30652 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.755 79.281 50.431 20.216 0 0 132.65 66.609 47 19 0 0 129 65 2 1 0 0 3 2 15366 2882 106 2805 6738;6739;6740 7732;7733;7734 7732 35 3 DFTSEQIDEILQNHTEIVFAR Unmodified 2504.2183 0.21833222 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7.54 3.15 1 3 3 2 1 3 83.732 83.732 3;4 6.2912E-39 30358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 144.72 126.42 341.93 224.87 229.03 203.73 245.93 208.46 320 231 226 198 246 203 9 9 7 7 8 10 110390 2883 106 2805 6741;6742;6743;6744;6745;6746;6747;6748;6749;6750;6751;6752;6753 7735;7736;7737;7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748;7749;7750;7751 7746 17 DFVDHIDLVDPVDGVVLVDPEYLK Unmodified 2710.3742 0.37416416 1145 J3QNU6;Q8BWG8;E0CY53 Arrb1 Beta-arrestin-1 yes no 0 0 0 0 4 0 1 96.334 96.334 4 0.004095 34439 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.65 21.722 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 572.95 2884 1145 2806 6754 7752 7752 1 DFVSEAYLLTLGK Unmodified 1454.7657 0.76569654 2057 Q5SQX6 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes yes 0 0 0 0 8.5 0.5 1 1 90.209 90.209 2;3 0.00039279 32696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.258 0 35.113 0 49.7 21.936 12.811 34.812 33 0 47 23 14 33 2 0 2 2 1 1 3794.3 2885 2057 2807 6755;6756 7753;7754 7753 2 DFWDNLEK Unmodified 1065.4767 0.47672516 1870 Q00623;A0A1L1STX7 Apoa1 Apolipoprotein A-I;Proapolipoprotein A-I;Truncated apolipoprotein A-I yes no 0 0 0 0 6 0 1 72.273 72.273 3 0.052818 25850 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.599 20.513 29.737 27.31 28.508 0 46.477 47.71 28 28 28 0 46 46 1 1 1 0 1 1 2508.5 2886 1870 2808 6757 7755 7755 1 DFYELEPEK Unmodified 1168.5288 0.52882031 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 6 3.58 1 1 2 1 64.465 64.465 2;3 0.00093474 22847 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.731 60.514 39.701 96.584 0 146.33 195.47 183.98 37 93 0 139 195 176 1 3 0 3 3 3 54808 2887 2555 2809 6758;6759;6760;6761;6762 7756;7757;7758;7759;7760;7761 7757 6 DFYHDLDPSEAK Unmodified 1435.6256 0.62557424 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 5.83 3.34 1 2 1 1 1 58.195 58.195 3;4 3.8288E-09 19926 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.14 73.656 540.75 351.34 430.5 504.48 385.81 582.79 508 361 427 491 398 556 7 5 4 6 5 6 74146 2888 2585 2810 6763;6764;6765;6766;6767;6768 7762;7763;7764;7765;7766;7767;7768 7766 7 DFYMTDSISR Unmodified 1233.5336 0.53358811 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 59.869 59.869 2 0.0086622 19991 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.49 43.669 39.098 65.761 75.925 0 131.39 133.76 37 65 74 0 130 129 1 1 2 0 2 2 8230.5 2889 2736 2811 6769;6770 7769;7770 7770 2 DGADFAK Unmodified 722.32352 0.32351898 1309;1308 P05063;P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5 Aldoc;Aldoa;Aldoart1 Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 0 7 3.16 1 1 1 1 1 44.453 44.453 2 0.014243 13334 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.78 53.822 1951.8 1902.9 2621.4 2099.6 2388.3 2797.3 1837 1942 2612 2080 2453 2688 4 5 4 4 5 6 797260 2890 1308;1309 2812 6771;6772;6773;6774;6775 7771;7772;7773;7774;7775;7776 7776 6 DGAELPDPDR Unmodified 1083.4833 0.4832671 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 4 4.56 2 1 1 1 44.045 44.045 2 2.3273E-09 13570 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 158.57 106.78 694.38 532.74 718.54 485.07 634.92 453.69 653 548 712 488 639 435 4 5 6 5 5 4 219750 2891 1072 2813 6776;6777;6778;6779;6780 7777;7778;7779;7780;7781;7782;7783 7781 7 DGALICTSCR Unmodified 1151.5063 0.50632751 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 5.5 0.5 1 1 43.835 43.835 2 0.00013546 12964 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.82 70.514 187.76 109.96 88.891 223.96 189.01 105.66 176 111 93 213 194 102 2 1 1 2 2 1 23458 2892 1289 2814 6781;6782 7784;7785 7784 2 DGCGLETAAGNGR Deamidation (N) 1277.5306 0.530628 1701 P61759;Q3TIR6 Vbp1 Prefoldin subunit 3 yes no 0 1 0 0 2 0 1 38.611 38.611 2 1.9952E-20 11224 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 160.77 130.08 20.159 0 38.263 37.465 36.981 0 19 0 37 37 37 0 1 0 1 1 1 0 2561.3 2893 1701 2815 6783 7786 7786 659 1 DGDEVPLPR Unmodified 996.48762 0.4876242 768 D3Z3F4;F7C846;G3XA66;P47802;D3YVW0;G3UYJ5;G3XA75 Mtx1 Metaxin-1 yes no 0 0 0 0 2.5 0.5 1 1 48.322 48.322 2 0.0093456 15933 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.221 43.381 29.568 56.634 57.214 36.335 85.149 0 28 56 56 37 83 0 1 2 1 1 2 0 8139.4 2894 768 2816 6784;6785 7787;7788 7788 2 DGDGTITTK Unmodified 906.42944 0.42944062 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 0 0 0 5.67 3.35 1 2 2 1 40.057 40.057 2 0.00051673 11362 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.86 62.888 754.56 751.94 834.55 813.26 606.11 279.07 710 760 850 800 612 269 5 5 6 6 5 3 98318 2895 1340 2817 6786;6787;6788;6789;6790;6791 7789;7790;7791;7792;7793;7794 7790 6 DGDLENPVLYNGAVK Deamidation (N) 1603.773 0.77296676 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 1 0 0 3.5 0.5 1 1 65.895 65.895 3 0.00010428 23524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.175 45.634 20.212 38.603 75.123 56.731 0 69.29 19 37 74 56 0 65 1 1 2 2 0 2 8233.1 2896 1649 2818 6792;6793 7795;7796 7796 632 2 DGDSGSLGSPSASR Unmodified 1291.564 0.56403662 3222 Q9JJY3 Smpd3 Sphingomyelin phosphodiesterase 3 yes yes 0 0 0 0 2 0 1 33.402 33.402 2 0.034865 8692 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.915 29.691 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1369.7 2897 3222 2819 6794 7797 7797 1 DGEAEEVVTNGK Deamidation (N) 1247.5517 0.5517406 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 1 0 0 1 0 1 45.893 45.893 2 0.016901 13552 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.977 44.463 20.387 0 0 0 18.867 29.31 19 0 0 0 19 28 1 0 0 0 1 1 1394.9 2898 1893 2820 6795 7798 7798 778 1 DGEEAGAYDGPR Unmodified 1235.5055 0.50545911 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 0 13 0 1 36.344 36.344 2 0.0011446 9714 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.908 52.597 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 1 0 1 0 3993.9 2899 1470 2821 6796 7799 7799 1 DGEPIENEEEDDEKHIFSDDSSELTIR Unmodified 3147.364 0.36400599 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 1.6 0.8 3 1 1 64.643 64.643 4 4.3587E-51 23175 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 149.73 133.33 298.6 355.83 463.67 361.56 462.83 492.9 282 358 462 359 470 474 6 6 6 6 7 7 135780 2900 71;74;949;1367 2822 6797;6798;6799;6800;6801 7800;7801;7802;7803;7804;7805;7806;7807;7808;7809 7808 10 DGEQHEDLNEVAK Unmodified 1482.6587 0.65866529 590 B1AU25;Q9Z0X1 Aifm1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 0 1.33 0.471 2 1 41.124 41.124 3;4 2.7616E-07 12451 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.2 82.344 78.997 25.717 46.335 104.06 64.909 0 74 28 46 102 65 0 2 1 1 3 2 0 10265 2901 590 2823 6802;6803;6804 7810;7811;7812 7812 3 DGESYLQLQDLLDGFDGPCVLDCK Unmodified 2756.2309 0.23094709 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 5.5 0.5 1 1 99.097 99.097 3;4 2.7714E-07 35883 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.356 46.554 2.1337 0 2.0656 1.9675 5.0714 1.9873 2 0 2 2 5 2 1 0 1 1 1 1 1945.6 2902 2629 2824 6805;6806 7813;7814 7813 2 DGEYVVEVR Unmodified 1064.5138 0.51383895 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 4.38 3.35 2 2 3 1 49.206 49.206 2;3 0.0012919 15633 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.8 67.924 544.04 804.32 897.13 640.86 882.67 670.15 514 801 901 641 894 645 4 5 7 6 7 3 112790 2903 1362 2825 6807;6808;6809;6810;6811;6812;6813;6814 7815;7816;7817;7818;7819;7820;7821;7822;7823;7824 7816 10 DGFTSEGEILEISDIQR Unmodified 1907.9113 0.91125116 2562 Q8HW98 Iglon5 IgLON family member 5 yes yes 0 0 0 0 3 0 1 75.611 75.611 3 0.00031529 28452 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.959 36.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2904 2562 2826 6815 7825 7825 1 DGFVALSK Unmodified 835.44397 0.44396847 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 7 0 1 59.831 59.831 2 0.024845 19193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.378 18.097 0 77.694 62.309 75.404 93.814 0 0 74 65 74 93 0 0 1 1 1 1 0 4354.8 2905 2744 2827 6816 7826 7826 1 DGGAASPATEGR Unmodified 1087.4894 0.48941511 12 Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0;A0A0A6YWK1 Clasp1 CLIP-associating protein 1 yes no 0 0 0 0 1.5 0.5 1 1 26.933 26.933 2 4.6989E-09 5347 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 102.53 63.755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2906 12 2828 6817;6818 7827;7828 7827 2 DGGEALVSPDGTVTEAPR Unmodified 1769.8432 0.84317159 1040 F8WGT1;Q68FL4;E9PX77 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 0 0 0 0 2.5 0.5 1 1 53.603 53.603 3 1.3018E-09 17739 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 109.38 78.031 0 20.216 0 39.772 35.555 38.427 0 19 0 37 37 37 0 1 0 1 1 1 21447 2907 1040 2829 6819;6820 7829;7830 7829 2 DGGQTAPASIR Unmodified 1071.5309 0.530886 1365 P13020;A0A0J9YUQ8 Gsn Gelsolin yes no 0 0 0 0 3.5 0.5 1 1 33.74 33.74 2 0.0020725 9127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.437 56.863 48.814 103.44 107.33 20.509 89.472 47.587 46 102 106 23 88 46 1 2 2 1 2 1 9528.8 + 2908 1365 2830 6821;6822 7831;7832 7831 2 DGGQTESNEEGK Unmodified 1249.5059 0.50585304 83 A0A0H2UH17;A0A0G2JDV6;Q80X50 Ubap2l Ubiquitin-associated protein 2-like yes no 0 0 0 0 1 0 1 29.903 29.903 3 0.021973 6712 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.095 25.842 0 0 0 30.604 0 9.594 0 0 0 28 0 9 0 0 0 1 0 1 690.35 2909 83 2831 6823 7833 7833 1 DGGSDYQSR Unmodified 983.39445 0.3944521 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 2 0.816 1 1 1 23.486 23.486 2 3.2876E-12 3946 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 174.92 130.5 103.1 79.722 97.986 37.386 75.515 126.83 97 83 97 37 78 121 3 3 3 1 3 3 11898 2910 1081 2832 6824;6825;6826 7834;7835;7836 7834 3 DGGSTTAGNSSQVSDGAAAVLLAR Unmodified 2204.0669 0.066916951 2795 Q921H8;H3BKL5;Q8VCH0 Acaa1a;Acaa1b 3-ketoacyl-CoA thiolase A, peroxisomal;3-ketoacyl-CoA thiolase B, peroxisomal yes no 0 0 0 0 4 0 1 62.038 62.038 3 1.4564E-07 21896 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.464 44.521 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 1775.9 2911 2795 2833 6827 7837 7837 1 DGIHFKPK Unmodified 940.51305 0.51305109 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;B7ZCD3 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 1 8 0 1 44.377 44.377 4 0.016511 11261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.962 36.489 78.126 101.11 128.81 120.93 135.91 114.45 74 102 130 120 139 111 1 1 1 1 1 1 7494.9 2912 456 2834 6828 7838 7838 1 DGIILCELINK Unmodified 1286.6904 0.69042311 84 A0A0G2JDV8;Q9DAW9 Cnn3 Calponin-3 yes no 0 0 0 0 8 0 1 81.748 81.748 3 0.00056432 28934 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.143 33.425 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 2862.7 2913 84 2835 6829 7839 7839 1 DGIVPFLQVFGHGK Unmodified 1512.8089 0.80889876 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 11.5 1.12 1 1 1 1 81.068 81.068 3 2.3209E-07 25669 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.83 72.734 429.45 162.33 86.941 219.9 372.38 223.51 401 167 83 210 373 216 4 2 1 3 4 3 66667 2914 2727 2836 6830;6831;6832;6833 7840;7841;7842;7843;7844;7845 7841 6 DGIWKPTLVILR Unmodified 1409.8395 0.83947061 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 1 11.3 1.25 1 1 1 74.119 74.119 3 1.1133E-07 22483 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.39 95.882 923.5 755.38 861.24 554.66 711.26 690.31 869 782 865 555 727 661 3 3 3 2 3 2 211380 2915 3303 2837 6834;6835;6836 7846;7847;7848 7846 3 DGKDQGVNVR Unmodified 1086.5418 0.54178503 2324;2750 Q80VP1;Q91W69 Epn1;Epn3 Epsin-1;Epsin-3 no no 0 0 0 1 4 0 1 32.945 32.945 3 0.015699 8097 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.274 24.408 88.445 121.72 0 89.587 60.2 107.01 83 120 0 83 65 102 1 1 0 1 1 1 11205 2916 2324;2750 2838 6837 7849 7849 1 DGKDYIFEVMDCSMPLIGEHQVEDR Unmodified 2982.3198 0.31977887 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 8 3.56 1 1 1 83.971 83.971 4 1.3592E-07 32010 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.877 35.137 39.335 103.99 133.37 135.37 19.874 158.83 37 102 130 130 19 149 1 3 3 3 1 3 30486 2917 2173 2839 6838;6839;6840 7850;7851;7852;7853 7850 4 DGLAEEVQR Unmodified 1015.4934 0.49343786 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 2.2 0.748 1 2 2 42.474 42.474 2;3 3.3491E-05 11921 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.26 47.95 355.39 209.06 351.51 305.74 122.41 371.74 334 214 348 301 125 352 4 3 4 5 3 5 147830 2918 1557 2840 6841;6842;6843;6844;6845 7854;7855;7856;7857;7858 7854 5 DGLAFNAIVHK Unmodified 1183.635 0.63495714 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.33 2.62 1 1 1 61.075 61.075 3 0.00055352 19865 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.655 51.8 442.22 257.97 479.05 118.68 379.08 376.92 416 278 464 120 380 362 4 4 4 2 4 3 42973 2919 2186 2841 6846;6847;6848 7859;7860;7861;7862 7859 4 DGLAFNALIHK Unmodified 1197.6506 0.6506072 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0 1 65.991 65.991 3 0.026784 20748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.915 22.562 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2920 893 2842 6849 7863 7863 1 DGLAFNALIHR Unmodified 1225.6568 0.65675521 310;842 A0A1L1SV25;P57780;D3Z0L8;D3Z761;E9PX29;Q91ZE6 Actn4;Sptbn4 Alpha-actinin-4 no no 0 0 0 0 7 0 1 61.473 61.473 3 5.1227E-05 19893 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.113 62.885 0 39.368 0 39.943 26.454 29.093 0 37 0 37 28 28 0 1 0 1 1 1 7580.2 2921 310;842 2843 6850 7864 7864 1 DGLALGPGPFVTALEYATDTK Unmodified 2135.0787 0.078650837 1973 Q3UGR5 Hdhd2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 0 0 9.4 3.01 1 1 1 2 99.669 99.669 3 1.4645E-11 40183 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.156 63.491 69.072 47.203 118.87 40.548 92.96 153.15 65 47 115 42 92 148 3 3 6 3 3 5 9885.5 2922 1973 2844 6851;6852;6853;6854;6855 7865;7866;7867;7868;7869;7870;7871;7872;7873;7874;7875 7874 11 DGLEMEK Unmodified 820.36367 0.36366924 1764 P63028;D3YU75 Tpt1 Translationally-controlled tumor protein yes no 0 0 0 0 8.5 4.5 1 1 49.514 49.514 2 0.03385 16008 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.206 30.036 0 0 96.354 95.906 0 88.478 0 0 93 93 0 83 0 0 1 1 0 1 10451 2923 1764 2845 6856;6857 7876;7877 7876 2 DGLGFCALIHR Unmodified 1257.6288 0.6288259 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 8 0 1 61.983 61.983 3 1.2592E-08 19533 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.52 96.895 0 58.811 46.243 0 45.781 67.984 0 56 46 0 46 65 0 1 1 0 1 1 8484.7 2924 418 2846 6858 7878 7878 1 DGLGGLPDIVR Unmodified 1110.6033 0.60332266 1641 Q3U4W8;P56399;D3YYA5;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 5.5 0.5 1 1 67.673 67.673 2 3.9869E-06 23660 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.4 56.981 196.37 210.38 180.06 35.344 197.78 232.07 185 213 176 37 195 223 3 3 2 1 2 3 25397 2925 1641 2847 6859;6860 7879;7880;7881 7881 3 DGLILTSR Unmodified 873.49198 0.4919813 2868 Q99LX0;A2A813 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 9.5 3.5 1 1 51.985 51.985 2 0.0012905 16478 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 141.93 76.127 411.25 381.57 529.3 382.18 202.17 316.6 388 393 528 382 201 297 2 2 2 2 1 1 71567 2926 2868 2848 6861;6862 7882;7883 7882 2 DGLLDVVEALQSPLVDKK Unmodified 1938.0674 0.067357869 3282 Q9QYR9 Acot2 Acyl-coenzyme A thioesterase 2, mitochondrial yes yes 0 0 0 1 9 0 1 91.655 91.655 4 0.0036001 32491 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.059 26.116 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 1618.7 2927 3282 2849 6863 7884 7884 1 DGLLPEDTFIVGYAR Unmodified 1664.841 0.84098675 1869 Q00612;A3KG36 G6pdx Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 0 6 0 1 80.942 80.942 3 0.00022614 29893 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.246 43.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2928 1869 2850 6864 7885 7885 1 DGLNEAWADLLELIDTR Unmodified 1942.9636 0.96362108 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 2.61 2 1 1 1 111.88 111.88 3 6.1482E-18 37744 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.22 106.57 4.2827 11.415 3.0594 18.181 11.589 12.518 4 11 3 17 12 12 1 3 1 4 3 3 8375.6 2929 2148 2851 6865;6866;6867;6868;6869 7886;7887;7888;7889;7890 7888 5 DGLQELR Unmodified 829.42938 0.42938104 734 D3Z025;Q45VK7 Dync2h1 Cytoplasmic dynein 2 heavy chain 1 yes no 0 0 0 0 6 4.97 1 1 1 20.862 20.862 3 0.013687 3126 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.296 7.9894 49.68 62.903 141.84 101.7 70.674 97.121 47 62 139 102 74 93 2 2 3 3 2 2 51221 2930 734 2852 6870;6871;6872 7891;7892;7893 7893 3 DGLTDVYNK Unmodified 1023.4873 0.48728985 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 54.393 54.393 3 0.00019744 18138 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.57 68.426 454.62 145.45 473.55 392.27 307.15 534.9 427 148 464 390 315 510 4 1 4 4 3 4 44494 2931 2622 2853 6873;6874;6875;6876 7894;7895;7896;7897 7894 4 DGLTPLHCAAR Unmodified 1209.5924 0.5924404 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 39.661 39.661 3 0.038874 10495 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.015 23.558 0 108.53 0 139.21 152.91 173.66 0 102 0 130 158 167 0 1 0 1 1 1 5517.1 2932 3449;3451;3452 2854 6877 7898 7898 1 DGLTPLHCGAR Unmodified 1195.5768 0.57679033 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812 Ank3 Ankyrin-3 yes no 0 0 0 0 6 0 1 38.557 38.557 3 0.058141 9990 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.625 25.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2933 3450 2855 6878 7899 7899 1 DGLVVFGK Unmodified 833.4647 0.46470391 3001 Q9CZC8;D3YXW0 Scrn1 Secernin-1 yes no 0 0 0 0 8.5 0.5 1 1 66.912 66.912 2 0.0088983 21847 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.64 44.084 0 116.03 123.96 0 323.4 113.06 0 111 121 0 319 111 0 1 1 0 2 1 19939 2934 3001 2856 6879;6880 7900;7901 7900 2 DGMAFNALIHK Unmodified 1215.607 0.60702783 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 0.5 1 1 63.455 63.455 3 0.00053204 20172 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.674 41.715 98.851 149.97 113.95 143.57 83.395 69.29 93 149 120 139 83 65 1 2 2 2 1 1 30822 2935 2148 2857 6881;6882 7902;7903 7902 2 DGMSLQTLTQGLETFAK Unmodified 1838.9084 0.90841439 3099 Q9D967 Mdp1 Magnesium-dependent phosphatase 1 yes yes 0 0 0 0 8 0 1 91.414 91.414 3 0.04135 33187 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.647 17.606 0 40.129 18.15 0 0 29.848 0 38 19 0 0 28 0 1 1 0 0 1 1383.5 2936 3099 2858 6883 7904 7904 1 DGNGYISAAELR Deamidation (N) 1265.5888 0.58879481 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 1 0 0 3.33 0.471 2 1 57.089 57.089 2 1.0276E-38 19783 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 194.29 139.58 87.723 178.4 176.18 207.01 0 183.35 83 176 180 199 0 172 2 4 3 3 0 4 45402 2937 1340 2859 6884;6885;6886 7905;7906;7907;7908 7905 414 4 DGNPGGPGSER Unmodified 1041.4476 0.4475503 3200 Q9JHE7 Tssc4 Protein TSSC4 yes yes 0 0 0 0 1 0 1 23.98 23.98 2 0.00073895 4133 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.937 48.691 14.952 13.888 0 15.302 0 14.924 14 14 0 14 0 14 1 1 0 1 0 1 2562.9 2938 3200 2860 6887 7909 7909 1 DGNVTCER Unmodified 949.39234 0.39234361 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 3 0 1 25.896 25.896 2 0.050258 5484 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.534 35.427 14.992 0 5.1164 4.8948 14.103 9.1916 14 0 5 5 14 9 1 0 1 1 1 1 1751.9 2939 2131 2861 6888 7910 7910 1 DGPNALTPPPTTPEWVK Deamidation (N) 1819.8992 0.89922991 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 0 6.75 3.63 1 2 1 70.039 70.039 3;4 1.4157E-05 25893 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.558 53.087 57.527 145.51 189.17 161.62 184.26 154.93 56 141 185 158 186 149 2 4 3 4 4 4 21274 2940 106;2253;2699 2862 6889;6890;6891;6892 7911;7912;7913;7914;7915;7916 7916 36 6 DGPNALTPPPTTPEWVK Unmodified 1818.9152 0.91521432 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 6.88 2.42 2 3 2 1 68.634 68.634 2;3;4 2.28E-06 24995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.97 51.929 531.42 345.1 505.78 381.89 584.49 571.81 499 352 500 380 583 546 9 7 8 7 7 8 188030 2941 106;2253;2699 2862 6893;6894;6895;6896;6897;6898;6899;6900 7917;7918;7919;7920;7921;7922;7923;7924;7925;7926;7927 7926 11 DGQEAVFAYYDK Unmodified 1404.6198 0.61976058 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7 3.54 1 1 1 1 64.451 64.451 2;3 1.1885E-12 22785 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.82 91.063 196.81 76.534 249.57 125.82 235.58 38.182 185 84 241 121 232 37 3 2 4 2 4 1 37699 2942 2479 2863 6901;6902;6903;6904 7928;7929;7930;7931 7929 4 DGQELHPLETTVNPSGK Unmodified 1820.8905 0.89045614 2224 Q6P6I8;E0CYM8 Sirpa yes no 0 0 0 0 5 0 1 52.321 52.321 3 0.00019272 17010 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.482 36.529 39.205 45.553 44.72 47.613 0 0 37 46 46 46 0 0 1 1 1 1 0 0 11552 2943 2224 2864 6905 7932 7932 1 DGQPCMDHDR Unmodified 1229.4554 0.45535457 2434 Q8BMJ2 Lars Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 1 0 1 25.105 25.105 3 0.053027 4564 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.689 29.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2944 2434 2865 6906 7933 7933 1 DGQVAADDLEEEREK Unmodified 1702.7646 0.76458692 55 A0A0R4J2D7;A0A0A6YVV4;A0A0A6YXJ3;Q3TRR0 Map9 Microtubule-associated protein 9 yes no 0 0 0 1 1 0 1 45.34 45.34 3 0.0052716 13237 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.495 28.866 0 58.658 55.418 37.138 0 39.442 0 56 56 37 0 37 0 1 1 1 0 1 3381.9 2945 55 2866 6907 7934 7934 1 DGQVIGIGAGQQSR Unmodified 1384.7059 0.70589025 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 5 0 1 46.613 46.613 3 0.02881 14301 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.093 18.822 88.352 62.096 66.159 0 56.581 58.081 83 65 65 0 56 56 1 1 1 0 1 1 3213.4 2946 2977 2867 6908 7935 7935 1 DGRDHIIEVVGSSMPLIGDHQDEDK Unmodified 2761.2977 0.29772152 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 4 0 1 68.471 68.471 5 0.0015028 24716 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.142 24.046 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 1809.6 2947 1282 2868 6909 7936 7936 1 DGSDVIYPAR Unmodified 1091.5247 0.52473799 1948 Q3TYL7;Q9QYJ3 Dnajb1 DnaJ homolog subfamily B member 1 yes no 0 0 0 0 4 0 1 45.817 45.817 2 0.010367 14281 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.42 35.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2948 1948 2869 6910 7937 7937 1 DGSGDSHPDFPEDADIDLKDVDK Unmodified 2486.0721 0.072121488 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 1 3.5 0.5 1 1 63.739 63.739 4 1.3903E-09 22679 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.16 57.356 48.773 55.437 110.65 156.22 77.64 96.923 46 56 112 148 83 93 1 1 3 2 2 2 14751 2949 2952 2870 6911;6912 7938;7939;7940;7941 7941 4 DGSGYIDENELDALLK Unmodified 1750.8261 0.82612454 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 6.67 4.5 1 1 1 83.413 83.413 3;4 7.4854E-06 30995 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.632 56.441 0 18.466 6.6052 8.9986 23.645 0 0 18 7 9 23 0 0 2 1 1 1 0 2550.5 2950 1892 2871 6913;6914;6915 7942;7943;7944 7942 3 DGSGYIDENELDALLKDLYEK Unmodified 2399.138 0.13801621 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 1 5 0 1 95.529 95.529 4 0.0027571 35449 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.118 28.663 9.6281 5.7348 0 0 6.0623 6.223 9 6 0 0 6 6 1 1 0 0 1 1 902.32 2951 1892 2872 6916 7945 7945 1 DGSIPLPAEILAGGCAGGSQVIFTNPLEIVK Unmodified 3122.6322 0.63218653 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 8 0.816 1 1 1 103.81 103.81 4 1.1075E-09 36311 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.728 49.205 29.951 0 15.625 23.066 4.6725 29.848 28 0 15 22 5 28 2 0 1 2 2 1 8235.7 2952 2396 2873 6917;6918;6919 7946;7947;7948 7947 3 DGSSGGVIR Unmodified 846.41954 0.41954463 2081 Q60692 Psmb6 Proteasome subunit beta type-6 yes yes 0 0 0 0 5 0 1 31.022 31.022 2 0.03443 6852 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.245 17.136 49.905 25.307 66.974 35.606 44.84 47.756 47 28 65 37 46 46 1 1 1 1 1 1 4493.4 2953 2081 2874 6920 7949 7949 1 DGSTGSSLEPELEER Unmodified 1604.7166 0.7165741 1079 H7BX46;G3X932;P59281 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 1.5 0.5 1 1 50.282 50.282 3 0.00071784 16344 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.885 35.649 0 0 0 39.778 35.225 48.031 0 0 0 37 37 46 0 0 0 1 1 1 7632.2 2954 1079 2875 6921;6922 7950;7951 7951 2 DGSVAIASKPR Unmodified 1099.5986 0.59857163 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 1 7 0.816 1 1 1 39.893 39.893 3 3.4805E-08 9828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.86 90.028 332.81 236.17 414.36 228.16 372.14 341.16 313 243 407 231 377 330 2 2 3 2 3 3 58751 2955 3028 2876 6923;6924;6925 7952;7953;7954 7953 3 DGTGVVEFVR Unmodified 1077.5455 0.54547343 1130 H7BX95;Q6PDM2;F7AI47 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 4.5 0.5 1 1 56.442 56.442 2 0.00016305 19010 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.855 64.498 88.008 134.62 121.14 80.882 96.981 190.18 83 134 116 74 97 181 1 2 1 1 1 2 19994 2956 1130 2877 6926;6927 7955;7956 7956 2 DGTISEDTIR Unmodified 1105.5251 0.52513192 2117 Q61187;D3Z0S9;A0A1B0GS09 Tsg101 Tumor susceptibility gene 101 protein yes no 0 0 0 0 2 0 1 43.242 43.242 2 0.001088 13203 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.732 43.635 36.354 0 21.47 48.276 38.415 35.148 34 0 22 46 40 34 1 0 1 1 1 1 6975.6 2957 2117 2878 6928 7957 7957 1 DGTTDVTR Unmodified 863.39847 0.39847484 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 2.5 0.5 1 1 27.256 27.256 2 0.013657 6089 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.833 26.151 69.745 0 0 49.44 64.408 38.171 65 0 0 46 65 37 2 0 0 1 2 1 21189 2958 1967 2879 6929;6930 7958;7959 7959 2 DGTVTAGNASGVSDGAGAVIIASEDAVK Unmodified 2531.2351 0.23510449 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 4 0 1 73.478 73.478 4 0.0098963 26942 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 31.923 13.204 0 48.323 37.135 0 18.538 38.913 0 46 37 0 19 37 0 1 1 0 1 1 3637 2959 2472 2880 6931 7960 7960 1 DGVANVSIEDR Unmodified 1173.5626 0.56258006 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 4.11 3.28 3 3 1 1 1 46.7 46.7 2;3 2.2281E-80 14575 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 228.13 169.32 849.47 652.72 616.46 806.78 866.19 912.3 797 666 620 785 876 879 11 10 9 12 7 13 491500 2960 1326 2881 6932;6933;6934;6935;6936;6937;6938;6939;6940 7961;7962;7963;7964;7965;7966;7967;7968;7969;7970;7971;7972;7973;7974 7961 14 DGVANVSIEDR Deamidation (N) 1174.5466 0.54659564 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 1 0 0 2 0 1 48.874 48.874 2 2.5046E-06 15569 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.35 54.143 30.044 0 0 60.374 44.361 28.582 28 0 0 56 46 28 1 0 0 1 1 1 4224.4 2961 1326 2881 6941 7975 7975 396 1 DGVAVITLPLGGSIK Unmodified 1438.8395 0.83953018 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11 2 1 1 80.888 80.888 3 3.0502E-05 27762 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.022 46.98 88.3 52.237 83.344 64.721 72.122 67.232 83 56 83 65 74 65 1 1 1 1 1 1 9372.3 2962 570 2882 6942;6943 7976;7977 7976 2 DGVCAQIEK Unmodified 1018.4753 0.47534495 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 7.33 4.03 1 1 1 47.216 47.216 2;3 0.00091853 15025 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.06 56.449 78.943 48.16 124.09 55.287 70.174 192.58 74 46 120 56 74 186 1 1 2 1 1 2 19514 2963 1986 2883 6944;6945;6946 7978;7979;7980 7978 3 DGVEYHFVSK Unmodified 1179.556 0.55603811 2259 Q6XE40;O88910 Mpp3 MAGUK p55 subfamily member 3 yes no 0 0 0 0 6 0 1 50.631 50.631 3 0.016248 15654 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.284 32.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2964 2259 2884 6947 7981 7981 1 DGVLVDEFGLPQIPAS Unmodified 1655.8407 0.8406524 3082 Q9D7S9 Chmp5 Charged multivesicular body protein 5 yes yes 0 0 0 0 4.5 0.5 1 1 95.611 95.611 3 0.0029033 35456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.319 22.943 2.1145 9.3823 3.0576 0 4.1148 2.0146 2 9 3 0 4 2 1 2 1 0 1 1 1117.3 2965 3082 2885 6948;6949 7982;7983 7983 2 DGVYFLYEALHGPPK Unmodified 1704.8512 0.8511575 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 9 0 1 80.538 80.538 3 0.0027142 27643 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.482 27.284 0 38.231 68.036 0 0 59.696 0 37 65 0 0 56 0 1 1 0 0 1 3800.6 2966 1558 2886 6950 7984 7984 1 DGVYFLYEALHGPPKK Unmodified 1832.9461 0.94612052 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 1 9 0 1 74.01 74.01 4 0.00031491 24515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.732 52.8 60.088 0 0 48.49 95.051 0 56 0 0 46 93 0 1 0 0 1 1 0 7448.9 2967 1558 2887 6951 7985 7985 1 DGVYILDLAAK Unmodified 1176.639 0.63903946 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 7 0.816 1 1 1 78.744 78.744 3 0.0006739 28022 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.942 47.706 69.872 63.757 143.78 54.845 37.714 58.62 66 66 139 56 37 56 2 2 3 2 1 2 9215.7 2968 2020 2888 6952;6953;6954 7986;7987;7988 7987 3 DGYAQILR Unmodified 934.48723 0.48723027 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 9 4 1 1 51.762 51.762 2 0.014811 16996 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.743 45.925 566.43 545.9 638.86 428.6 234.32 765.1 534 559 641 431 240 724 2 2 2 2 1 2 87220 2969 2843 2889 6955;6956 7989;7990 7989 2 DGYDYDGYR Unmodified 1122.4254 0.42541787 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 8 5 1 1 43.997 43.997 2 0.0009881 13896 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.3 85.662 88.564 130.5 110.41 55.973 227.36 66.384 83 130 112 56 222 65 1 2 2 1 2 1 16667 2970 1130 2890 6957;6958 7991;7992 7991 2 DGYENAR Unmodified 823.34605 0.34604534 2358 Q8BFP9 Pdk1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 0 0 0 0 2 0 1 26.198 26.198 2 0.058628 5424 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.255 37.096 0 0 46.786 67.036 64.911 0 0 0 46 65 65 0 0 0 1 1 1 0 2664.7 2971 2358 2891 6959 7993 7993 1 DGYISNGELFQVLK Deamidation (N) 1582.7879 0.78788854 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 1 0 0 7.75 3.11 1 1 1 1 83.717 83.717 3 0.00010422 31812 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.373 53.992 109.75 86.349 56.643 74.874 55.934 98.608 103 89 56 71 60 94 3 3 2 2 2 2 15372 2972 2164 2892 6960;6961;6962;6963 7994;7995;7996;7997 7994 848 4 DGYISNGELFQVLK Unmodified 1581.8039 0.80387296 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 6 0 1 80.442 80.442 3 0.0013746 29651 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.328 36.664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2973 2164 2892 6964 7998 7998 1 DHAGVMGESNR Oxidation (M) 1187.4989 0.49893394 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 1 0 3 0 1 19.636 19.636 3 0.027031 2951 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.632 27.886 0 12.618 8.981 0 12.552 0 0 12 9 0 12 0 0 1 1 0 1 0 1069.7 2974 919;937 2893 6965 7999 7999 43 1 DHASIQMNVAEVDR Unmodified 1583.7362 0.7362041 2938 Q9CQR2 Rps21 40S ribosomal protein S21 yes yes 0 0 0 0 3 0 1 46.82 46.82 3 1.4006E-07 15155 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.619 50.141 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2975 2938 2894 6966 8000 8000 1 DHAVFTR Unmodified 844.41915 0.4191507 1765 P63037;B1AXY1 Dnaja1 DnaJ homolog subfamily A member 1 yes no 0 0 0 0 5 0 1 30.567 30.567 3 0.025276 6708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.682 23.981 29.85 38.419 0 40.441 0 39.442 28 38 0 37 0 37 1 1 0 1 0 1 5567.8 2976 1765 2895 6967 8001 8001 1 DHCQWGSPFSVIEYECKPNETR Unmodified 2738.1853 0.1853343 2050 Q5M8N0 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes yes 0 0 0 1 5 0 1 65.186 65.186 4 2.6173E-10 23062 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.947 57.27 0 0 38.39 36.906 66.295 0 0 0 37 37 65 0 0 0 1 1 1 0 3890.9 2977 2050 2896 6968 8002 8002 1 DHCVAHK Unmodified 865.38647 0.38647037 1866 P99028;Q9D2Q7 Uqcrh Cytochrome b-c1 complex subunit 6, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 24.563 24.563 3 0.0075538 3839 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.597 40.055 109.13 79.612 134.39 121.75 219.61 82.235 102 79 134 120 218 79 3 2 4 3 5 2 10844 2978 1866 2897 6969;6970;6971;6972 8003;8004;8005;8006;8007 8007 5 DHDMFGYIK Unmodified 1124.4961 0.4960804 2910 Q9CQ54;A0A0U1RPJ5 Ndufc2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes no 0 0 0 0 6 0 1 57.908 57.908 3 0.012248 19042 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.327 34.056 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 4748.3 2979 2910 2898 6973 8008 8008 1 DHEDSSLQWSNPAQQTLYFGEK Unmodified 2579.1565 0.15646024 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 5 0 2 69.402 69.402 3;4 6.8604E-16 25110 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.822 80.422 50.257 0 29.298 39.273 27.359 38.661 47 0 28 38 28 37 2 0 1 2 1 2 8884.9 2980 1152 2899 6974;6975 8009;8010 8010 2 DHFEEAMR Unmodified 1033.4287 0.42872911 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 3.5 0.5 1 1 36.584 36.584 3 0.0065571 9932 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.379 51.593 59.631 0 76.886 64.689 94.306 0 56 0 74 65 93 0 1 0 1 1 1 0 7353.3 2981 1875 2900 6976;6977 8011;8012 8012 2 DHFMDEFFEQVEEIR Unmodified 1969.8516 0.85162779 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 4 0 1 87.845 87.845 3 0.020118 33274 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.977 28.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1197.1 2982 1696 2901 6978 8013 8013 1 DHGEVGMEEEPFALGAEASNFQQEPIAR Unmodified 3057.3774 0.37742841 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 3 0 1 71.057 71.057 3 3.3591E-08 26387 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.648 50.536 9.5993 0 9.6896 0 0 0 9 0 9 0 0 0 1 0 1 0 0 0 1515.1 2983 894 2902 6979 8014 8014 1 DHGVNSFLVYMAFK Unmodified 1626.7864 0.78644876 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 11 0.816 1 1 1 80.319 80.319 3 0.0013709 24652 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.414 39.713 98.284 118.5 152.53 0 135.98 0 93 120 148 0 130 0 1 1 1 0 1 0 12332 2984 1158 2903 6980;6981;6982 8015;8016;8017 8016 3 DHIIDDALVR Unmodified 1165.6091 0.60913632 1165 O08759 Ube3a Ubiquitin-protein ligase E3A yes yes 0 0 0 0 4 0 1 52.193 52.193 3 0.0021 17295 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.5 44.599 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 3767.8 2985 1165 2904 6983 8018 8018 1 DHIIEVVGSSMPLIGDHQDEDK Unmodified 2433.1482 0.14820374 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 5.5 0.5 1 1 70.577 70.577 4 1.4054E-11 25719 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.538 54.946 59.338 94.178 103.81 94.598 112.6 115.11 56 93 102 93 111 111 2 2 2 2 2 3 19183 2986 1282 2905 6984;6985 8019;8020;8021 8019 3 DHIVDPR Unmodified 850.42972 0.42971539 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 3.5 0.5 1 1 31.229 31.229 3 0.022553 7912 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.714 43.237 39.149 65.902 37.005 67.986 45.37 19.49 37 65 37 65 47 19 2 2 1 2 2 1 25238 2987 20;2354 2906 6986;6987 8022;8023 8022 2 DHLHEVLLCSDLVK Unmodified 1676.8556 0.85559095 909 E9Q4M4;Q91VN4 Chchd6 MICOS complex subunit Mic25 yes no 0 0 0 0 6 0 1 61.223 61.223 4 0.0010711 20646 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.752 30.783 49.984 44.954 37.085 0 0 69.29 47 46 37 0 0 65 1 1 1 0 0 1 2783.3 2988 909 2907 6988 8024 8024 1 DHNEEMVTR Unmodified 1129.4822 0.48222124 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 1 0 1 26.64 26.64 3 0.00018278 5178 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.53 85.28 49.017 0 57.332 67.628 0 0 46 0 56 65 0 0 1 0 1 1 0 0 8697.9 2989 1386 2908 6989 8025 8025 1 DHNIPGELER Unmodified 1178.568 0.56799978 1974 Q3UH59;Q61879 Myh10 Myosin-10 yes no 0 0 0 0 3 0 1 38.368 38.368 3 0.0013857 11340 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.066 32.516 49.07 0 48.327 26.88 44.875 58.415 46 0 46 28 46 56 1 0 1 1 1 1 7562 2990 1974 2909 6990 8026 8026 1 DHPAMAEPLPEPK Unmodified 1430.6864 0.68640036 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 4 0 1 48.91 48.91 3 0.034522 15727 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.178 10.209 422.33 325.69 517.85 373.31 535.68 532.64 398 341 514 379 546 514 1 1 1 1 1 1 3709.7 2991 992 2910 6991 8027 8027 1 DHSYQEEAAMELK Unmodified 1549.6719 0.67187251 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 6.33 4.71 2 1 51.402 51.402 3;4 7.9451E-08 16592 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.52 93.684 147.9 90.742 132.44 103.56 193.59 163.7 139 93 130 102 195 158 3 2 2 2 3 2 26068 2992 2014 2911 6992;6993;6994 8028;8029;8030 8030 3 DHTEIVFAR Unmodified 1086.5458 0.54580778 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 7.67 3.86 1 1 1 42.937 42.937 3 9.0173E-09 12635 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.15 110.21 207.62 107.43 0 153.01 238.62 37.617 194 111 0 149 232 37 2 1 0 2 2 1 52418 2993 2253 2912 6995;6996;6997 8031;8032;8033 8033 3 DHTNAQFK Deamidation (N) 960.43011 0.43010932 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 1 0 0 4 0 1 35.723 35.723 3 0.021239 9454 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.825 53.055 59.372 43.545 83.513 75.905 0 69.29 56 46 83 74 0 65 1 1 1 1 0 1 3761.2 2994 3152 2913 6998 8034 8034 1095 1 DHTNAQFK Unmodified 959.44609 0.44609374 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 32.992 32.992 3 0.00070008 7343 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.52 87.709 612.63 374.93 412.2 587.85 272.41 757.61 575 380 415 565 287 718 5 3 3 5 3 5 63472 2995 3152 2913 6999;7000;7001;7002 8035;8036;8037;8038;8039 8036 5 DHYLEFEK Unmodified 1079.4924 0.49237523 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 4.5 0.5 1 1 53.066 53.066 3 0.0034017 17363 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.165 45.411 29.904 76.72 0 90.434 73.25 0 28 74 0 84 74 0 1 2 0 2 2 0 6866.2 2996 814 2914 7003;7004 8040;8041 8041 2 DIAAHIK Unmodified 766.43374 0.43373813 1776 P63168;Q80ZS7 Dynll1;BC048507 Dynein light chain 1, cytoplasmic yes no 0 0 0 0 8.5 2.69 1 1 1 1 42.829 42.829 3 0.0052912 11294 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 30.569 1833.9 1234.9 2171.8 1718.4 543.86 2182.6 1727 1311 2155 1700 568 2062 4 4 4 4 2 4 221280 2997 1776 2915 7005;7006;7007;7008 8042;8043;8044;8045 8043 4 DIAAYIK Unmodified 792.43815 0.43815481 3031 Q9D0M5;D6RIN4 Dynll2 Dynein light chain 2, cytoplasmic yes no 0 0 0 0 9.25 2.28 1 1 1 1 62.618 62.618 2;3 0.0070259 22210 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.635 22.429 671.59 261.15 878.87 826.34 990.67 901.81 632 271 859 821 1013 869 3 1 3 4 4 3 346160 2998 3031 2916 7009;7010;7011;7012 8046;8047;8048;8049 8049 4 DIAIEQER Unmodified 972.48762 0.4876242 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 3 0 1 43.644 43.644 2 0.0060906 13667 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.41 25.91 168.02 113.72 157.37 132.71 0 214.27 158 120 158 130 0 201 1 1 1 1 0 1 23571 2999 3261 2917 7013 8050 8050 1 DIANENEAQFQIR Unmodified 1546.7376 0.73758431 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 55.716 55.716 2;3 8.0673E-14 19067 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.5 81.624 69.618 123.11 56.285 37.937 103.34 106.59 65 121 56 38 102 102 1 4 2 2 2 3 22494 3000 1203 2918 7014;7015;7016;7017 8051;8052;8053;8054 8052 4 DIAQLLTHSR Unmodified 1152.6251 0.62512073 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 8.5 0.5 1 1 58.012 58.012 3 0.0057095 16875 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.293 37.459 0 0 80.068 37 74.072 97.024 0 0 74 37 74 93 0 0 1 1 1 1 14367 3001 2511 2919 7018;7019 8055;8056 8056 2 DIASGLIGPLILCK Unmodified 1468.8323 0.83233632 865 G3X9T8;G3X8Q5;E9PZD8;Q61147 Cp Ceruloplasmin yes no 0 0 0 0 10 0 1 89.415 89.415 3 0.014362 28928 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.996 27.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3002 865 2920 7020 8057 8057 1 DIASHVK Unmodified 768.413 0.41300269 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 6 0 1 37.427 37.427 3 0.0053793 9410 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.407 59.307 39.084 45.215 65.407 45.184 63.597 67.475 37 46 65 46 65 65 1 1 1 1 1 1 2598.4 3003 2317 2921 7021 8058 8058 1 DICNDVLSLLEK Deamidation (N) 1418.6963 0.69629635 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 1 0 0 7.33 3.13 4 1 2 2 91.549 91.549 2;3 1.4043E-11 34289 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.56 80.257 6.3832 132.11 136.7 189.65 119.92 58.417 6 125 139 179 121 56 1 5 5 7 5 2 32252 3004 1773 2922 7022;7023;7024;7025;7026;7027;7028;7029;7030 8059;8060;8061;8062;8063;8064;8065;8066;8067 8066 702 9 DICNDVLSLLEK Unmodified 1417.7123 0.71228076 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 8 2.58 1 1 1 1 1 1 90.735 90.735 3 4.0096E-15 34369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.94 99.521 922.38 663.3 1234.4 831.28 1029.6 896.41 867 687 1215 837 1038 860 6 7 10 8 6 8 328210 3005 1773 2922 7031;7032;7033;7034;7035;7036 8068;8069;8070;8071;8072;8073;8074;8075;8076;8077;8078 8070 11 DIDDDLEGEVTEECGK Unmodified 1822.7415 0.74146822 1968 Q3UEB3 Puf60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 0 1.5 0.5 1 1 64.115 64.115 3 4.1802E-18 22789 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 133.47 112.01 69.126 44.235 105.27 94.841 28.359 59.696 65 47 102 93 28 56 2 2 2 3 1 2 16896 3006 1968 2923 7037;7038 8079;8080;8081 8081 3 DIDENAYAK Unmodified 1037.4666 0.46655441 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 3 0 1 48.01 48.01 3 0.0063431 15736 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.398 34.283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3007 2697 2924 7039 8082 8082 1 DIDGKLQALK Unmodified 1099.6237 0.62372375 3439 yes yes 0 0 0 1 8 0 1 55.127 55.127 3 0.0059712 16305 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.022 3.486 98.586 99.917 117.44 132.56 134.35 144.34 93 102 120 130 139 139 1 1 1 1 1 1 9582.6 + 3008 3439 2925 7040 8083 8083 1 DIDIHEVR Unmodified 995.50361 0.50360861 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 6.67 4.5 1 1 1 42.354 42.354 3 0.0011329 13208 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.82 40.901 741.78 574.15 795.84 697.8 953.21 808.37 697 589 796 690 963 778 8 8 7 7 7 6 71598 3009 2714 2926 7041;7042;7043 8084;8085;8086;8087;8088;8089;8090;8091;8092;8093 8086 10 DIDILIVR Unmodified 955.57023 0.57023162 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 6 0 1 72.34 72.34 2 0.060759 25827 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.59 36.368 0 29.18 36.609 37.595 35.326 48.028 0 28 37 37 37 46 0 1 1 1 1 1 5006.8 3010 1814 2927 7044 8094 8094 1 DIDSFVPSK Unmodified 1006.4971 0.49712625 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8.5 3.25 1 1 2 2 64.222 64.222 2;3 0.001476 21263 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.65 57.443 622.04 293.98 715.34 567.95 789.42 903.83 584 306 689 559 807 869 5 3 4 6 6 7 72796 3011 2433 2928 7045;7046;7047;7048;7049;7050 8095;8096;8097;8098;8099;8100;8101;8102 8099 8 DIDTAAK Unmodified 732.36538 0.3653838 26 A0A087WQS5;Q9CR84;P56384;P56383 Atp5g2;Atp5g1;Atp5g3 ATP synthase F(0) complex subunit C1, mitochondrial;ATP synthase F(0) complex subunit C3, mitochondrial;ATP synthase F(0) complex subunit C2, mitochondrial yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 41.262 41.262 2 0.0067424 11753 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.77 30.023 1409 736.93 1024.5 1292.8 426.5 630.63 1319 798 1026 1246 468 603 4 5 4 5 3 3 291080 3012 26 2929 7051;7052;7053;7054;7055 8103;8104;8105;8106;8107 8105 5 DIEAMDPSILK Unmodified 1230.6166 0.61658946 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 6.83 2.91 1 1 2 1 1 71.622 71.622 2;3 6.9722E-13 25564 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.99 103.88 217.69 235.13 146.34 84.383 199.97 243.85 204 231 139 83 194 231 3 3 3 2 2 4 83856 3013 1554 2930 7056;7057;7058;7059;7060;7061 8108;8109;8110;8111;8112;8113 8111 6 DIEAMDPSILKGEPASGK Unmodified 1856.919 0.91897907 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 1 6 0 1 66.828 66.828 3 0.0023442 23239 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.883 29.808 0 0 0 39.601 44.657 47.762 0 0 0 37 46 46 0 0 0 1 1 1 2284 3014 1554 2931 7062 8114 8114 1 DIEDESTGLK Unmodified 1105.5139 0.51389853 3035 Q9D154 Serpinb1a Leukocyte elastase inhibitor A yes yes 0 0 0 0 2.67 0.471 1 2 51.934 51.934 2;3 2.59E-05 17570 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.06 80.504 69.42 64.479 0 30.604 56.251 107.13 65 65 0 28 56 102 1 1 0 1 1 2 10608 3015 3035 2932 7063;7064;7065 8115;8116;8117 8116 3 DIEDPEIVVQATVL Unmodified 1539.8032 0.80320426 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 3 0.816 1 1 1 91.751 91.751 2 1.4398E-06 32061 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.47 85.244 9.599 5.654 4.9488 4.2022 3.138 1 9 6 5 4 3 1 3 3 2 2 1 1 12906 3016 2587 2933 7066;7067;7068 8118;8119;8120;8121;8122 8120 5 DIEEHLQR Unmodified 1038.5094 0.50942227 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 0 0 0 4 0 1 36.716 36.716 3 0.00721 9991 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.598 34.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3017 3332 2934 7069 8123 8123 1 DIEEIIDELK Unmodified 1215.6234 0.62344898 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 0 6.6 3.26 1 2 1 1 91.067 91.067 2;3 1.7629E-11 34549 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 166.19 73.077 118.04 157.36 158.17 85.971 108.57 98.586 111 157 159 88 108 94 3 3 4 3 3 4 28930 3018 3074 2935 7070;7071;7072;7073;7074 8124;8125;8126;8127;8128 8125 5 DIEESSMVK Unmodified 1036.4747 0.47467625 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 3.5 0.5 1 1 51.463 51.463 3 0.00019049 17348 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.98 65.731 88.619 65.262 35.846 108.68 35.409 127.98 83 65 37 102 37 121 2 2 1 3 1 3 17287 3019 154 2936 7075;7076 8129;8130;8131 8130 3 DIEGFLEENQTK Unmodified 1421.6674 0.66743906 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 5 0 1 69.76 69.76 3 0.046872 25243 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.954 13.718 0 38.921 26.715 27.965 55.662 47.448 0 37 28 28 56 46 0 1 1 1 1 1 1920.4 3020 581 2937 7077 8132 8132 1 DIENQYETQITQIEHEVSSSGQEVQSSAK Unmodified 3263.5066 0.5065879 661 CON__P35527 yes yes 0 0 0 0 3.33 0.471 2 1 77.273 77.273 4;5 2.7825E-18 28719 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.085 61.704 20.126 38.603 47.926 38.678 0 70.356 19 38 47 38 0 66 1 2 2 2 0 3 10284 + 3021 661 2938 7078;7079;7080 8133;8134;8135 8135 3 DIEQASLAAVSQSLATR Unmodified 1758.9112 0.91119158 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 6 0 1 74.603 74.603 3 4.5582E-05 26953 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.644 42.708 0 0 0 20.081 36.461 38.402 0 0 0 19 37 37 0 0 0 1 1 1 4785.9 3022 287 2939 7081 8136 8136 1 DIETFYNTSIEEMPLNVADLI Oxidation (M);Deamidation (N) 2443.1352 0.13523902 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 1 1 0 13 0 1 113.68 113.68 3 8.066E-05 44742 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.487 33.033 0 5.271 2.9297 0 0 0 0 5 3 0 0 0 0 1 1 0 0 0 1082.2 3023 1679 2940 7082 8137 8137 647 124 1 DIETFYNTSIEEMPLNVADLI Unmodified 2426.1563 0.15630881 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 0 13 0 1 116.6 116.6 3 0.0007475 45050 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.116 26.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1881.8 3024 1679 2940 7083 8138 8138 1 DIEVTKEEFAQSAIR Unmodified 1734.8788 0.87882882 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 9 4 1 1 63.765 63.765 3 0.00033596 22566 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.431 34.746 231.03 134.44 191.14 213.97 105.13 33.388 217 144 194 208 111 32 2 2 2 2 2 1 20539 3025 2396 2941 7084;7085 8139;8140 8139 2 DIFGLLQAYADGVDLTEK Unmodified 1966.9888 0.9887732 712 D3YX85;E9PX52;Q7SIG6 Asap2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 8.5 0.5 1 1 104.92 104.92 3 8.3613E-07 36856 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.55 57.185 0 0 4 0 0 0 0 0 4 0 0 0 0 0 1 0 0 0 1007.4 3026 712 2942 7086;7087 8141;8142 8142 2 DIFQEIFDK Unmodified 1153.5655 0.56554017 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 7 0 2 88.464 88.464 2;3 0.0144 32641 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.056 38.983 0 20.216 0 0 19 29.848 0 19 0 0 19 28 0 1 0 0 1 1 1829.6 3027 1618 2943 7088;7089 8143;8144 8144 2 DIFRPLDILSDLDLR Unmodified 1799.9781 0.97814893 2615 Q8K406 Lgi3 Leucine-rich repeat LGI family member 3 yes yes 0 0 0 1 8 0 1 96.945 96.945 3 0.0050679 34877 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.108 31.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3028 2615 2944 7090 8145 8145 1 DIFSLEER Unmodified 1007.4924 0.49237523 1902 Q14BI1;B1AXF3;Q8BUN9;B1AXF2 Slc24a2 yes no 0 0 0 0 8 3.56 1 1 1 64.537 64.537 2 0.005525 23186 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.94 43.597 166.38 211.34 243.66 80.534 127.65 134.94 157 213 241 83 130 130 3 4 4 2 2 2 29109 3029 1902 2945 7091;7092;7093 8146;8147;8148;8149 8149 4 DIGAIAQVHAENGDIIAEEQQR Deamidation (N) 2377.151 0.15098093 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 0 6.08 4.15 2 2 2 2 1 3 63.102 63.102 3;4 3.0413E-97 22783 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 189.07 173.37 574.8 379.66 594.45 441.68 471.61 592.42 543 393 582 436 474 568 12 9 10 9 9 11 562500 3030 1158 2946 7094;7095;7096;7097;7098;7099;7100;7101;7102;7103;7104;7105 8150;8151;8152;8153;8154;8155;8156;8157;8158;8159;8160;8161;8162;8163;8164;8165;8166;8167;8168;8169 8157 311 20 DIGAIAQVHAENGDIIAEEQQR Unmodified 2376.167 0.16696535 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 5.12 3.06 2 3 2 1 61.198 61.198 3;4 5.3417E-81 21546 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 176.44 161.55 156.03 165.46 127.49 167.2 194.24 169.28 146 162 130 159 195 164 7 5 6 6 4 5 195630 3031 1158 2946 7106;7107;7108;7109;7110;7111;7112;7113 8170;8171;8172;8173;8174;8175;8176;8177;8178;8179;8180;8181 8170 12 DIHDDQDYLHSLGK Unmodified 1654.7587 0.75871368 1170 O08917;G3UYU4;G3UZZ5;G3UWW8 Flot1 Flotillin-1 yes no 0 0 0 0 4.5 0.5 1 1 55.856 55.856 4 0.015905 18823 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.941 25.001 129.83 0 0 90.622 63.245 57.891 121 0 0 84 65 56 2 0 0 2 1 1 12715 3032 1170 2947 7114;7115 8182;8183 8183 2 DIICQIAYAR Unmodified 1221.6176 0.61759251 1573 P47962;D3YYV8 Rpl5 60S ribosomal protein L5 yes no 0 0 0 0 8.5 0.5 1 1 64.746 64.746 2;3 0.00068485 20852 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.338 19.338 69.102 0 108.1 43.011 43.804 87.04 65 0 102 46 46 84 1 0 1 1 1 2 7003.1 3033 1573 2948 7116;7117 8184;8185 8184 2 DIIDEQGQR Unmodified 1072.5149 0.51490158 902 F6U7V1;E9Q401;A0A1Y7VJP1 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 2 0 1 42.193 42.193 2 0.022341 12807 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.582 24.422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3034 902 2949 7118 8186 8186 1 DIIEYAELK Unmodified 1092.5703 0.5702912 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 5.5 0.5 1 1 71.833 71.833 2 0.00057252 26252 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.28 67.732 49.225 26.473 0 0 27.265 107.95 46 28 0 0 28 102 1 1 0 0 1 2 5335.4 3035 2057 2950 7119;7120 8187;8188 8187 2 DIIFAVK Unmodified 804.47454 0.47454032 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 69.788 69.788 2;3 0.010125 23244 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.78 25.705 484.86 631.62 538.68 703.89 808.06 973.73 455 624 519 676 830 933 3 3 4 3 4 4 174920 3036 3016 2951 7121;7122;7123;7124 8189;8190;8191;8192;8193 8190 5 DIILALK Unmodified 784.50584 0.50584045 821 E9PYC6;E9Q858;E9PUY9;E9PYA9;E9PVM6;Q3TCD4;Q9WUR2 Eci2 Enoyl-CoA delta isomerase 2, mitochondrial yes no 0 0 0 0 9 0 1 73.152 73.152 2 0.031981 24169 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.699 0 99.474 62.452 0 0 0 0 93 65 0 0 0 0 1 1 0 0 0 0 8027.3 3037 821 2952 7125 8194 8194 1 DIILPFR Unmodified 872.51199 0.51198846 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 8 0.816 1 1 1 72.125 72.125 2 0.0087234 24365 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.86 12.605 49.063 69.16 339.5 89.06 316.21 145.66 46 65 314 83 311 139 1 1 2 1 2 1 105950 3038 1836 2953 7126;7127;7128 8195;8196;8197 8196 3 DIINEEEVQFLK Unmodified 1475.7508 0.75077476 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4 0 1 77.032 77.032 3 0.00022101 28603 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.548 37.662 29.856 37.355 0 20.234 28.359 0 28 37 0 19 28 0 1 1 0 1 1 0 2847.3 3039 2382 2954 7129 8198 8198 1 DIINNTSLAELEK Unmodified 1458.7566 0.75658842 181 A0A0R4J0P6;Q8VDG3 Parn Poly(A)-specific ribonuclease PARN yes no 0 0 0 0 10.2 1.79 1 2 1 106.84 106.84 2;3 0.0012382 33805 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.672 35.139 39.022 10 0 15.302 0 0 38 10 0 14 0 0 3 1 0 1 0 0 12420 3040 181 2955 7130;7131;7132;7133 8199;8200;8201;8202 8201 4 DIKPAALYHYLVVPK Unmodified 1725.9818 0.98177775 924 E9Q7F8;F8WH96;Q9CPS6 Hint3 Histidine triad nucleotide-binding protein 3 yes no 0 0 0 1 10.5 0.5 1 1 70.696 70.696 4 0.00021392 20973 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.919 51.431 267.03 168.21 62.698 229.07 154.81 228.12 250 176 65 213 148 214 3 3 1 3 1 3 40585 3041 924 2956 7134;7135 8203;8204;8205;8206 8203 4 DIKPQLELIEDEEK Unmodified 1697.8723 0.87234646 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 8.75 4.26 1 1 2 67.954 67.954 3;4 9.312E-05 24624 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.908 47.704 167.11 321.33 352.21 221.35 231.27 234.77 157 315 353 213 223 222 2 3 3 2 2 3 44575 3042 1382 2957 7136;7137;7138;7139 8207;8208;8209;8210 8208 4 DIKPQNLLLDPDTAVLK Unmodified 1892.0619 0.06187856 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 1 8 0 1 75.952 75.952 4 0.005691 26154 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.647 26.341 0 48.204 44.271 58.569 0 118.33 0 46 46 56 0 111 0 1 1 1 0 1 2554 3043 947 2958 7140 8211 8211 1 DILCGAADEVLAVLK Unmodified 1585.8385 0.83854391 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 7 0 1 99.169 99.169 3 0.00020712 36248 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.533 40.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3044 2216 2959 7141 8212 8212 1 DIMEDTIEDK Unmodified 1207.5278 0.52783403 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 2 0 1 62.801 62.801 3 0.00071418 22088 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.688 51.731 29.844 17.895 18.458 19.667 0 29.848 28 19 19 19 0 28 1 1 1 1 0 1 3826.5 3045 1160 2960 7142 8213 8213 1 DIMEDTIEDKLDTK Unmodified 1664.7815 0.78148254 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 7.14 3.76 2 2 1 2 72.145 72.145 3;4 5.3553E-11 26486 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.92 100.7 911.01 418.36 885.79 924.93 911.87 944.83 854 446 878 894 934 908 8 5 7 6 6 7 153840 3046 1160 2961 7143;7144;7145;7146;7147;7148;7149 8214;8215;8216;8217;8218;8219;8220;8221;8222 8216 9 DINAYNGETPTEK Deamidation (N) 1451.6416 0.64161824 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 1 0 0 4.11 3.21 2 4 2 1 50.928 50.928 2;3;4 8.6155E-14 16380 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.27 91.107 434.28 245.26 489.94 423.15 531.09 450.41 408 259 481 418 538 433 6 4 6 7 7 6 97592 3047 2194 2962 7150;7151;7152;7153;7154;7155;7156;7157;7158 8223;8224;8225;8226;8227;8228;8229;8230;8231 8231 882 9 DINAYNGETPTEK Unmodified 1450.6576 0.65760265 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 4.5 0.5 1 1 49.596 49.596 2 0.00042184 16082 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.48 52.007 0 0 59.51 0 0 88.478 0 0 55 0 0 83 0 0 2 0 0 2 5228.1 3048 2194 2962 7159;7160 8232;8233 8232 2 DINELNLPK Unmodified 1054.5659 0.56587452 1686 P61082 Ube2m NEDD8-conjugating enzyme Ubc12 yes yes 0 0 0 0 8.67 3.09 1 1 1 63.287 63.287 2;3 0.00078367 21714 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.3 68.456 143.1 92.388 36.155 146.38 180.28 67.495 134 93 37 139 181 65 3 2 1 3 3 1 15605 3049 1686 2963 7161;7162;7163 8234;8235;8236 8234 3 DINESDEVEVYSR Unmodified 1553.6845 0.68454569 783 E9QAS9;E9QAT0;D3Z6U8;E9QNF5;Q6AXB7;E9QAS8;P35922 Fmr1 Fragile X mental retardation protein 1 homolog yes no 0 0 0 0 1.5 0.5 1 1 52.206 52.206 2;3 0.00068358 17253 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.466 53.808 29.865 20.073 38.679 0 9.414 29.848 28 19 37 0 9 28 1 1 2 0 1 1 5242.7 3050 783 2964 7164;7165 8237;8238 8238 2 DINQEVYNFLATAGAK Unmodified 1752.8683 0.86826413 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 10.1 1.88 1 3 1 2 89.924 89.924 2;3;4 3.741E-12 31737 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.075 68.943 149.71 39.078 284.52 273.73 319.52 270.43 140 37 274 270 324 260 3 1 5 6 5 4 149610 3051 2843 2965 7166;7167;7168;7169;7170;7171;7172 8239;8240;8241;8242;8243;8244;8245;8246;8247 8243 9 DIPFSAIYFPVYAHCK Unmodified 1926.9338 0.93384128 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 10 1 1 1 79.997 79.997 3;4 0.00022329 24571 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.842 27.751 48.761 0 100.38 60.71 26.499 0 46 0 93 56 28 0 1 0 1 1 1 0 17183 3052 2396 2966 7173;7174 8248;8249 8249 2 DIPGLTDTTVPR Unmodified 1283.6721 0.67213051 1736 P62754 Rps6 40S ribosomal protein S6 yes yes 0 0 0 0 5 0 1 61.976 61.976 2 0.0077301 21654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.65 18.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3053 1736 2967 7175 8250 8250 1 DIPLQSAATLGVNPCTAYR Unmodified 2046.0204 0.020424451 3150 Q9DCS3;A2A845 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes no 0 0 0 0 7 0 1 70.457 70.457 3 0.0017867 24177 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.908 19.77 30.044 0 0 0 0 20.254 28 0 0 0 0 19 1 0 0 0 0 1 4962 3054 3150 2968 7176 8251 8251 1 DIPNENELQFQIK Unmodified 1586.794 0.79403655 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 8 3.56 2 2 2 70.29 70.29 2;3;4 1.603E-07 24900 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.92 61.296 188.01 380.82 270.16 341.05 399.26 403.3 177 371 278 333 408 388 4 5 4 5 6 6 87790 3055 3123 2969 7177;7178;7179;7180;7181;7182 8252;8253;8254;8255;8256;8257;8258 8254 7 DIPNGATLLVGGFGLCGIPENLIGALLK Deamidation (N) 2822.5252 0.52520226 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 1 0 0 9 0 1 119.43 119.43 4 0.00010516 39524 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.206 30.019 0 0 0 10 0 0 0 0 0 10 0 0 0 0 0 1 0 0 2016.1 3056 3028 2970 7183 8259 8259 1053;1054 1 DIPNGATLLVGGFGLCGIPENLIGALLK 2 Deamidation (N) 2823.5092 0.50921785 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 2 0 0 13 0 1 119.51 119.51 4 0.00015886 45285 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.901 32.171 2.146 0 0 7.651 0 0 2 0 0 7 0 0 1 0 0 1 0 0 1639.6 3057 3028 2970 7184 8260 8260 1053;1054 1 DIPSFER Unmodified 862.41848 0.418482 1921 Q3TG45;Q9CPS5;Q9CX56 Psmd8 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 0 6 0 1 51.649 51.649 2 0.027115 16150 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.407 29.631 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3058 1921 2971 7185 8261 8261 1 DIPVDSPELK Unmodified 1111.5761 0.57610486 406;155 A0A338P699;Q6S9I0;Q6S9I2;Q6S9I3;D3YTY9;A0A0R4J038;O08677 Kng2;Kng1 Kininogen-1;Kininogen-1 heavy chain;Bradykinin;Kininogen-1 light chain no no 0 0 0 0 4 0 1 59.966 59.966 3 0.0013651 20988 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.349 43.607 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 1523.5 3059 406;155 2972 7186 8262 8262 1 DIPVVHQLLSR Unmodified 1275.7299 0.72992016 1249 O70310 Nmt1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 0 8 0 1 64.544 64.544 3 0.01906 20696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.847 24.518 0 0 40.034 0 27.961 38.644 0 0 37 0 28 37 0 0 1 0 1 1 2479.9 3060 1249 2973 7187 8263 8263 1 DIPVYLFSR Unmodified 1108.5917 0.59169534 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 10 2.16 1 1 1 75.36 75.36 2 3.4339E-05 25111 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 137.14 66.465 147.59 281.81 241.32 258.87 101.37 442.7 139 278 250 250 102 418 2 3 3 3 1 4 54382 3061 2513 2974 7188;7189;7190 8264;8265;8266;8267 8266 4 DIQDSLTVSNEVQTAK Deamidation (N) 1747.8476 0.84758827 1564 P47754 Capza2 F-actin-capping protein subunit alpha-2 yes yes 0 1 0 0 4 0 1 61.493 61.493 3 0.0013403 21676 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.434 40.359 49.358 0 0 49.593 36.424 0 46 0 0 46 37 0 1 0 0 1 1 0 2106.7 3062 1564 2975 7191 8268 8268 593 1 DIQDSLTVSNEVQTAK Unmodified 1746.8636 0.86357268 1564 P47754 Capza2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 0 7.33 4.03 1 1 1 62.158 62.158 3 1.6721E-24 21805 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.17 107.67 127.52 204.33 253.32 120.28 102.58 206.55 120 203 251 120 102 195 1 3 4 2 2 2 37134 3063 1564 2975 7192;7193;7194 8269;8270;8271;8272 8271 4 DIQENDEEAVQVK Unmodified 1515.7053 0.70528113 2369 Q8BG32;G3UYI4;G3UYL3;G3UYL8;G3UX15;G3UX67;G3UWV7 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 1 0 1 51.269 51.269 3 0.0089402 15514 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.408 33.782 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2056 3064 2369 2976 7195 8273 8273 1 DIQQWEYVPLGPFLGK Unmodified 1888.9723 0.97233527 1521 P35505 Fah Fumarylacetoacetase yes yes 0 0 0 0 8.5 0.5 1 1 94.38 94.38 3 3.3016E-05 34174 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.493 75.58 0 20.216 29.01 59.479 19 29.848 0 19 28 56 19 28 0 1 1 2 1 1 7605.7 3065 1521 2977 7196;7197 8274;8275;8276 8275 3 DIQSLPR Unmodified 827.45012 0.45011648 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 5.5 0.5 1 1 44.911 44.911 2 0.012879 13472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.9 35.12 0 97.252 207.36 169.02 61.384 234.9 0 93 204 167 65 222 0 1 2 2 1 2 28096 3066 3271;3353 2978 7198;7199 8277;8278 8277 2 DIQTNVYIK Unmodified 1092.5815 0.58152458 1921 Q3TG45;Q9CPS5;Q9CX56 Psmd8 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 0 7 0 1 58.044 58.044 2 0.00083195 18332 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.143 38.965 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3067 1921 2979 7200 8279 8279 1 DIQVIVNVPPTVQAR Unmodified 1647.9308 0.93080481 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 7 0 2 69.025 69.025 2;3 0.00016122 23505 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.705 18.446 20.387 0 0 0 36.688 58.649 19 0 0 0 37 56 1 0 0 0 1 1 1792 3068 71;74;949;1367 2980 7201;7202 8280;8281 8280 2 DIRPYCYWDAEK Unmodified 1614.7137 0.71367774 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 1 7 0.707 1 2 1 60.639 60.639 3;4 0.00069587 19527 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.558 41.074 178.04 163.13 183.98 317.16 335.64 279.83 167 166 186 305 344 268 2 3 2 3 4 3 38131 3069 1311 2981 7203;7204;7205;7206 8282;8283;8284;8285 8283 4 DISEASVFDAYVLPK Unmodified 1652.8298 0.82975336 1747 P62855 Rps26 40S ribosomal protein S26 yes yes 0 0 0 0 6.5 0.5 1 1 83.419 83.419 3;4 0.0034824 31044 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.201 35.697 0 47.97 58.288 0 47.429 20.005 0 46 56 0 46 19 0 2 1 0 2 1 7050.8 3070 1747 2982 7207;7208 8286;8287 8286 2 DISENKR Unmodified 860.43519 0.4351947 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 6.5 0.5 1 1 30.694 30.694 3 0.014099 6255 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.068 17.594 1343.1 1104.4 1269.6 1242.6 1503.8 1302.4 1264 1143 1292 1232 1535 1262 2 2 2 2 2 2 190420 3071 1762 2983 7209;7210 8288;8289 8288 2 DISGTSDPFAR Unmodified 1164.5411 0.54111633 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 6 0 1 54.028 54.028 2 0.053036 17266 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.16 15.307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3072 3391 2984 7211 8290 8290 1 DISISEEEIKESQEK Unmodified 1762.8473 0.84725392 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 1 4 0 1 58.108 58.108 3 0.002847 20115 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.034 37.823 29.807 0 39.884 0 0 59.696 28 0 37 0 0 56 1 0 1 0 0 1 3245.6 3073 3285 2985 7212 8291 8291 1 DISLSEYK Unmodified 953.47058 0.47057715 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 7.67 2.56 1 1 2 1 1 59.179 59.179 2;3 0.00019237 18915 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 157.86 83.929 508.67 574.92 697 475.37 839.28 266.55 479 576 698 474 832 260 5 5 7 4 7 4 114960 3074 604 2986 7213;7214;7215;7216;7217;7218 8292;8293;8294;8295;8296;8297;8298 8296 7 DISNLEENDETR Unmodified 1433.627 0.62703081 164 A0A0R4J087;Q8BJI1;A0A0R4J252 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17 yes no 0 0 0 0 2 0.816 1 1 1 47.306 47.306 2;3 4.8732E-27 15035 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 177.83 132.46 108.57 120.67 44.808 108.16 35.103 77.882 102 121 46 102 37 74 2 2 1 2 1 2 33978 3075 164 2987 7219;7220;7221 8299;8300;8301 8300 3 DISSAVQANPALTELSLR Unmodified 1883.9953 0.99525556 2741 Q91VI7;A0A1B0GSG5;A0A1B0GRG4;A0A1B0GRY7 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 13 0 1 74.414 74.414 3 0.063113 28175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 28.333 5.6122 69.42 64.479 0 69.472 83.627 0 65 65 0 65 83 0 1 1 0 1 1 0 6435.3 3076 2741 2988 7222 8302 8302 1 DISSIGLK Unmodified 831.47018 0.47018322 2264 Q6ZQ38;D3YWC5 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 0 9.67 2.49 1 1 1 60.175 60.175 2 0.01367 18000 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.57 34.188 300.06 111.17 330.94 329.8 419.18 328.09 282 111 327 327 426 319 2 1 2 2 2 2 26592 3077 2264 2989 7223;7224;7225 8303;8304;8305 8304 3 DISTNYYASQK Unmodified 1288.5935 0.59354583 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 6.75 0.829 2 1 1 51.181 51.181 2;3 6.4827E-08 15953 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.25 71.249 118.12 119.7 64.379 69.147 203.96 181.8 111 121 65 65 204 176 2 2 1 1 2 2 20955 3078 1324 2990 7226;7227;7228;7229 8306;8307;8308;8309 8307 4 DISTTLNADEAVAR Unmodified 1474.7264 0.72635092 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 4.5 0.5 1 1 56.508 56.508 2;3 0.00035677 19102 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.183 39.634 0 9.256 68.916 19.269 38.863 0 0 9 65 19 38 0 0 1 2 1 2 0 12623 3079 1581 2991 7230;7231 8310;8311 8311 2 DISWFSPNGEK Unmodified 1278.5881 0.58806652 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 6 0 1 72.475 72.475 3 0.015599 25973 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.844 22.052 29.667 17.403 48.578 0 0 39.442 28 19 46 0 0 37 1 1 1 0 0 1 1488 3080 71;74;949;1367 2992 7232 8312 8312 1 DITAALAAER Unmodified 1029.5455 0.54547343 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 7.67 3.77 2 1 56.51 56.51 2;3 0.00084393 19235 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.513 33.352 356.33 483.24 715.96 578.61 556.8 594.93 338 488 706 578 575 573 1 3 1 3 2 2 77022 3081 118;1534 2993 7233;7234;7235 8313;8314;8315 8315 3 DITGELEYATK Unmodified 1238.603 0.60304789 2471 Q8BWR2;B1AV58;B1AV57 Pithd1 PITH domain-containing protein 1 yes no 0 0 0 0 5 0 1 65.344 65.344 2 5.2016E-08 23156 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.69 57.064 39.344 26.513 37.459 17.645 47.305 0 37 28 37 19 46 0 1 1 1 1 1 0 3473.3 3082 2471 2994 7236 8316 8316 1 DITLEASR Unmodified 903.46616 0.46616048 2211 Q6P1F6 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 0 5 0 1 46.801 46.801 2 0.051866 14488 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.88 32.805 0 98.952 0 71.045 0 78.884 0 93 0 65 0 74 0 1 0 1 0 1 7236.2 3083 2211 2995 7237 8317 8317 1 DITYFIQQLLR Unmodified 1408.7715 0.77145062 2836;2170 Q641P0;Q99JY9;A0A087WRA1 Actr3b;Actr3 Actin-related protein 3B;Actin-related protein 3 no no 0 0 0 0 7.6 5.43 2 1 1 1 104.59 104.59 2;3 5.0014E-66 29130 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 219.8 168.89 38.435 87.944 67.509 58.097 45.562 44.636 36 85 66 54 44 42 3 5 3 5 2 4 57458 3084 2170;2836 2996 7238;7239;7240;7241;7242 8318;8319;8320;8321;8322;8323;8324;8325 8324 8 DIVCYLSLLER Unmodified 1379.7119 0.71188683 2200 Q6NS52;Q3TSN3 Dgkb Diacylglycerol kinase beta yes no 0 0 0 0 9 0 1 89.988 89.988 2 0.0030055 31792 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.944 43.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2083.7 3085 2200 2997 7243 8326 8326 1 DIVEAHYR Unmodified 1001.493 0.49304393 1383 P15105;D3YVK1 Glul Glutamine synthetase yes no 0 0 0 0 6 3.27 1 1 2 1 1 37.662 37.662 2;3 0.00064395 9531 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.98 76.409 436.42 324.7 565.01 276.08 316.61 425.89 410 325 548 270 324 408 8 5 6 4 5 6 397780 3086 1383 2998 7244;7245;7246;7247;7248;7249 8327;8328;8329;8330;8331;8332;8333;8334;8335 8334 9 DIVEYAELK Unmodified 1078.5546 0.55464113 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 5 0 1 68.122 68.122 3 0.00093474 24431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.731 31.974 0 0 0 29.902 37.328 0 0 0 0 28 37 0 0 0 0 1 1 0 1764.3 3087 2282 2999 7250 8336 8336 1 DIVHSGLAYTMER Unmodified 1490.7188 0.71876312 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 6 0 1 56.466 56.466 3 2.2267E-11 18486 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.52 99.88 0 0 58.074 56.517 65.394 0 0 0 56 56 65 0 0 0 1 1 1 0 17443 3088 1458 3000 7251 8337 8337 1 DIVPGDIVEIAVGDKVPADIR Unmodified 2190.1896 0.18959827 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 1 6 0 1 85.429 85.429 4 0.0079203 31967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.888 22.394 20.387 0 0 9.837 0 9.594 19 0 0 9 0 9 1 0 0 1 0 1 1049.7 3089 1242 3001 7252 8338 8338 1 DIVQFVPFR Unmodified 1119.6077 0.60767976 3371;1896;2428;2573;202 Q9Z140;Q3UYN2;Q8BT60;Q9D6C8;Q8BLR2;Q0VE82;A0A0R4J1D0;P59108;Q8JZW4;A0A0R4J0J1;Q1RLL3;Q9DC53 Cpne6;Cpne3;Cpne4;Cpne7;Cpne2;Cpne5;Cpne9;Cpne8 Copine-6;Copine-3;Copine-4;Copine-7;Copine-2;Copine-5;Copine-9;Copine-8 no no 0 0 0 0 9.8 1.72 1 2 1 1 76.504 76.504 2;3 0.00097535 25788 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.81 65.684 535.88 581.34 474.79 531.87 459.59 407.37 504 586 477 519 466 387 4 5 4 5 5 3 217730 3090 3371;2428;1896;202;2573 3002 7253;7254;7255;7256;7257 8339;8340;8341;8342;8343;8344 8341 6 DIVTPVPQEEVK Unmodified 1352.7187 0.71874635 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YE00;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 4 0.816 1 1 1 59.351 59.351 2;3 6.0968E-05 20433 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.015 41.407 89.702 73.296 27.215 28.982 95.576 78.884 84 75 28 28 93 74 2 3 1 1 2 2 22583 3091 2301;365 3003 7258;7259;7260 8345;8346;8347;8348 8348 4 DIVYEMGELGVLGPTIK Unmodified 1832.9594 0.95938732 36 A0A0A0MQ68;Q60759 Gcdh Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 91.489 91.489 3 5.8011E-06 33906 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.98 49.729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3092 36 3004 7261 8349 8349 1 DIWNIFLEK Unmodified 1176.6179 0.61791009 872 E9Q0A3;Q68FM7;D6RGQ8 Arhgef11 yes no 0 0 0 0 9.5 0.5 1 1 91.816 91.816 2;3 0.002497 29864 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.261 37.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3093 872 3005 7262;7263 8350;8351 8351 2 DIYDQGGEQAIK Unmodified 1335.6307 0.63065962 3248 Q9JMC3;D3Z1U5 Dnaja4 DnaJ homolog subfamily A member 4 yes no 0 0 0 0 4 0 1 53.392 53.392 2 0.0069787 17910 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.466 19.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3094 3248 3006 7264 8352 8352 1 DKAGYVGLVTVPVATLAGR Unmodified 1886.0625 0.062547262 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 1 10 0 1 73.654 73.654 3 2.8836E-05 22203 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.045 45.394 0 20.216 0 0 0 49.036 0 19 0 0 0 46 0 1 0 0 0 1 4998.2 3095 992 3007 7265 8353 8353 1 DKDDDLPQFTSAGESFNK Unmodified 2012.8963 0.89632937 2904 Q9CPY7;A0A0G2JEM7 Lap3 Cytosol aminopeptidase yes no 0 0 0 1 4 0 1 63.549 63.549 3 0.027058 22592 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.387 23.444 0 0 0 9.4841 18.761 19.719 0 0 0 9 19 19 0 0 0 1 1 1 2035.6 3096 2904 3008 7266 8354 8354 1 DKDDDLPQFTSAGESFNK Deamidation (N) 2013.8803 0.88034496 2904 Q9CPY7;A0A0G2JEM7 Lap3 Cytosol aminopeptidase yes no 0 1 0 1 5 0 1 63.481 63.481 3 0.005626 22338 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.477 23.158 30.044 0 0 39.747 36.876 0 28 0 0 37 37 0 1 0 0 1 1 0 3742 3097 2904 3008 7267 8355 8355 1020 1 DKDISWFSPNGEK Deamidation (N) 1522.694 0.69398816 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 1 0 1 6 0 1 64.854 64.854 3 0.032525 22267 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.305 28.091 273.58 134.81 252.4 218.07 274.42 245.88 257 148 251 218 280 238 1 1 1 1 1 1 20660 3098 71;74;949;1367 3009 7268 8356 8356 23 1 DKDSSEPDENPATEPR Unmodified 1785.7653 0.7653152 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 1 2 0.816 1 1 1 35.761 35.761 3 8.1035E-06 9282 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.514 60.729 108.91 65.932 112.78 76.085 100.55 77.081 102 65 111 75 102 75 2 3 3 2 3 3 22557 3099 2167 3010 7269;7270;7271 8357;8358;8359;8360 8357 4 DKEEDMLEVLLDATK Unmodified 1747.855 0.85498183 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 1 5 0 1 89.989 89.989 4 0.02183 34244 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.801 26.329 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1597.7 3100 2479 3011 7272 8361 8361 1 DKEYLAQVFK Unmodified 1239.6499 0.6499385 2962 Q9CRA7 Atp5s ATP synthase subunit s, mitochondrial yes yes 0 0 0 1 8 0 1 65.404 65.404 3 0.0074499 21143 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.878 44.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3101 2962 3012 7273 8362 8362 1 DKFEPGILQLSQWFK Unmodified 1834.9618 0.96177059 1941 Q8VDQ1;Q3TXN1 Ptgr2 Prostaglandin reductase 2 yes no 0 0 0 1 10 0 1 88.97 88.97 3 6.9739E-05 28832 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.383 54.733 39.516 36.703 0 61.208 0 0 37 37 0 56 0 0 1 1 0 1 0 0 3836.6 3102 1941 3013 7274 8363 8363 1 DKHVEEVR Unmodified 1010.5145 0.51450765 1619 P54227 Stmn1 Stathmin yes yes 0 0 0 1 4.5 0.5 1 1 30.358 30.358 4 0.020912 7084 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.35 41.88 157.65 166.17 53.288 58.032 0 118.33 148 167 56 56 0 111 2 2 1 1 0 1 18409 3103 1619 3014 7275;7276 8364;8365 8364 2 DKLESEMEDAYHEHQANLLR Unmodified 2427.1125 0.11248694 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 1 4 0 1 61.333 61.333 5 0.064001 21537 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 28.333 14.171 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 3024.5 3104 2724 3015 7277 8366 8366 1 DKLSGEYEK Unmodified 1067.5135 0.5135046 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 5 0 1 45.309 45.309 3 0.045998 13725 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.727 16.075 0 106.87 99.306 104.3 67.591 146.25 0 102 102 102 74 139 0 1 1 1 1 1 7570.1 3105 1957 3016 7278 8367 8367 1 DKQDEEQR Unmodified 1046.4629 0.46286601 1375 P14211 Calr Calreticulin yes yes 0 0 0 1 6.67 4.5 1 1 1 24.115 24.115 3 0.007978 3815 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.177 47.68 232.35 75.032 260.02 350.74 516.72 201.15 218 74 260 338 516 196 2 1 3 2 3 1 26351 3106 1375 3017 7279;7280;7281 8368;8369;8370 8370 3 DKQVVSGQAAK Unmodified 1129.6091 0.60913632 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 7 0 1 38.385 38.385 3 9.152E-08 9140 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.96 68.964 138.46 97.68 90.447 81.274 215.54 102.58 130 102 93 83 213 102 1 1 1 1 1 1 5961.1 3107 2295 3018 7282 8371 8371 1 DKSFLAMVVDIVR Unmodified 1491.8119 0.81193523 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 10 0 1 91.132 91.132 3 0.003293 29631 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.186 33.324 0 0 33.154 33 0 24.518 0 0 32 32 0 23 0 0 1 1 0 1 5378 3108 2587 3019 7283 8372 8372 1 DKVNDIVDQVITIGK Unmodified 1655.9094 0.90940066 1104 G5E8H1 Gria2 no no 0 0 0 1 8 0 2 79.914 79.914 3;4 0.00035501 27940 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.331 46.456 68.942 141.1 128.45 76.274 81.072 95.759 65 139 130 74 84 92 1 2 2 1 2 2 11812 3109 1104 3020 7284;7285 8373;8374 8373 2 DKVVPVADIITPNQFEAELLSGR Unmodified 2510.3381 0.33805342 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 8.25 2.77 1 2 1 86.879 86.879 3;4 6.8282E-07 32555 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.943 36.216 39.609 57.097 27.962 9.4903 124.13 58.094 37 56 28 9 121 56 2 2 1 1 4 2 10035 3110 2587 3021 7286;7287;7288;7289 8375;8376;8377;8378 8375 4 DKWLAPDGLIFPDR Unmodified 1641.8515 0.85149185 244 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 1 7 0 1 76.378 76.378 3 0.0051961 26853 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.501 34.112 59.862 44.908 0 40.441 0 0 56 46 0 37 0 0 1 1 0 1 0 0 4023 3111 244 3022 7290 8379 8379 1 DLAACIK Unmodified 789.40547 0.40547447 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 10 3 1 1 53.775 53.775 2;3 0.014537 16261 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.268 32.03 0 0 0 39.747 36.876 0 0 0 0 37 37 0 0 0 0 1 1 0 2077.6 3112 1278 3023 7291;7292 8380;8381 8380 2 DLAADPLNR Unmodified 983.50361 0.50360861 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 0 4 0 1 51.358 51.358 2 0.018544 16912 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.351 33.741 59.862 44.908 0 60.393 43.334 58.459 56 46 0 56 46 56 1 1 0 1 1 1 4138.2 3113 3077 3024 7293 8382 8382 1 DLAAGAVPANLKPSK Unmodified 1450.8144 0.81437807 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 10.3 1.89 2 1 57.077 57.077 3;4 6.2805E-05 16578 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.529 51.471 434.28 145.25 465.48 357.49 496.35 419.53 408 148 455 361 504 402 3 1 3 3 3 2 45468 3114 510 3025 7294;7295;7296 8383;8384;8385 8383 3 DLAALEDK Unmodified 873.44436 0.4443624 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 3.54 1 1 1 1 59.25 59.25 2 0.0027938 19773 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.41 50.558 806.9 710.22 659.37 662.97 900.14 893.21 759 729 672 658 919 862 4 4 3 4 4 4 148890 3115 551 3026 7297;7298;7299;7300 8386;8387;8388;8389 8388 4 DLAALEDKVK Unmodified 1100.6077 0.60773933 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6.5 0.5 1 1 63.457 63.457 3 0.0001165 21681 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.04 52.36 294.45 339.09 359.39 186.42 298.13 359.26 278 343 360 185 305 345 2 2 2 1 2 2 31668 3116 551 3027 7301;7302 8390;8391 8390 2 DLAALGDK Unmodified 801.42323 0.42323303 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 0 1 56.754 56.754 3 0.059034 17653 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.427 3.8683 69.53 0 36.176 78.726 0 49.036 65 0 37 74 0 46 1 0 1 1 0 1 5337.3 3117 551 3028 7303 8392 8392 1 DLAALGDKVNSLGETAQR Unmodified 1856.9592 0.9592044 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.5 0.5 1 1 67.353 67.353 3;4 7.9944E-08 22757 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.953 56.25 48.714 64.988 53.077 75.649 110.03 75.744 46 65 56 74 111 74 1 1 1 1 1 1 6368.6 3118 551 3029 7304;7305 8393;8394 8393 2 DLADELALVDVMEDK Unmodified 1674.8022 0.80221798 1315 Q564E2;P06151;A0A1B0GSX0;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 93.573 93.573 3 9.4806E-26 37288 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.43 116.8 103.7 134.26 75.989 47.317 151.85 136.46 97 133 75 44 149 132 5 7 5 4 6 7 60241 3119 1315 3030 7306;7307;7308;7309;7310 8395;8396;8397;8398;8399;8400;8401;8402;8403 8402 9 DLADELALVDVMEDK Oxidation (M) 1690.7971 0.7971326 1315 Q564E2;P06151;A0A1B0GSX0;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 1 0 3.5 0.5 1 1 82.674 82.674 3 2.0421E-05 31258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.771 50.795 39.328 16.752 48.569 0 0 0 37 19 46 0 0 0 1 1 1 0 0 0 4344.8 3120 1315 3030 7311;7312 8404;8405 8405 64 2 DLADELALVDVMEDKLK Unmodified 1915.9812 0.98124498 1315 Q564E2;P06151;A0A1B0GSX0;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1 5.67 0.943 2 1 94.893 94.893 3;4 0.0005358 35345 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.026 34.745 39.398 7.156 59.516 10.054 19.874 0 37 9 56 10 19 0 2 1 3 1 1 0 4818.3 3121 1315 3031 7313;7314;7315 8406;8407;8408 8406 3 DLAELAEQSSTAAELAR Unmodified 1773.8745 0.87447172 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 4 0 1 72.841 72.841 3 0.0016454 26585 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.514 26.418 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 7746.1 3122 3341 3032 7316 8409 8409 1 DLAELINK Unmodified 914.5073 0.50729701 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 7 0 1 70.555 70.555 2 0.048077 24195 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.42 23.538 82.188 85.962 0 82.351 96.241 102.79 77 86 0 77 99 99 1 1 0 1 1 1 8720.6 3123 3261 3033 7317 8410 8410 1 DLAFTLEER Unmodified 1092.5451 0.54513908 1317 P06801 Me1 NADP-dependent malic enzyme yes yes 0 0 0 0 5 0 1 64.684 64.684 2 0.022786 22832 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.558 7.8453 78.583 72.16 76.424 0 67.99 0 74 74 75 0 65 0 1 1 1 0 1 0 5223 3124 1317 3034 7318 8411 8411 1 DLAGALDEKELIEK Unmodified 1542.8141 0.8141033 980 F6QKK2;Q8VEH3 Arl8a ADP-ribosylation factor-like protein 8A yes no 0 0 0 1 6 0 1 69.371 69.371 4 0.0018488 24456 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.831 39.508 49.128 45.631 0 61.208 0 49.036 46 46 0 56 0 46 1 1 0 1 0 1 2713.4 3125 980 3035 7319 8412 8412 1 DLAGSIIGK Unmodified 872.49673 0.49673232 613 B2M1R6;P61979;H3BLL4 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 8.33 0.471 2 1 63.239 63.239 2;3 2.8052E-05 20093 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 144.09 54.734 460.21 621.25 633.59 651.76 752.2 758.85 434 623 649 643 762 732 1 2 2 2 2 3 85877 3126 613 3036 7320;7321;7322 8413;8414;8415 8413 3 DLAILLGMLDPVEK Unmodified 1525.8426 0.84256665 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 10 1.63 1 2 1 1 1 105.67 105.67 3;4 9.3158E-06 36934 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.19 75.863 43.679 89.972 196.09 120.05 72.79 121.28 41 88 194 115 72 115 3 5 10 6 3 6 52973 3127 2194 3037 7323;7324;7325;7326;7327;7328 8416;8417;8418;8419;8420;8421;8422;8423;8424;8425;8426 8418 11 DLAILLGMLDPVEK Oxidation (M) 1541.8375 0.83748127 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 1 0 9 0 1 95.562 95.562 3 0.031255 34196 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.317 20.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 677.02 3128 2194 3037 7329 8427 8427 168 1 DLALGLVPGDR Unmodified 1124.619 0.61897272 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 7 0 1 68.301 68.301 2 0.017556 23149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.202 33.183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3129 620 3038 7330 8428 8428 1 DLAPAPAPAPAPSLPGNLGDGTLSCRPECSGELTK Unmodified 3515.7025 0.70246772 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 5 0 1 69.665 69.665 5 1.839E-05 25196 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.241 33.477 39.153 56.2 44.519 37.788 0 0 37 56 46 37 0 0 1 1 1 1 0 0 4619 3130 510 3039 7331 8429 8429 1 DLAPTGIR Unmodified 841.46577 0.46576654 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 6 0 1 46.102 46.102 2 0.004198 13517 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.29 60.31 78.446 81.491 91.627 83.379 99.921 85.627 74 83 93 83 102 83 1 1 1 1 1 1 9753.3 3131 2879 3040 7332 8430 8430 1 DLAQAALSDTESGVQLSSSER Unmodified 2163.0291 0.029134462 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 4 0 1 68.385 68.385 3 0.0029869 24605 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.937 25.301 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 2285.2 3132 2559 3041 7333 8431 8431 1 DLASAQLVQILHR Unmodified 1462.8256 0.82561145 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 8 0.816 1 1 1 67.477 67.477 3 1.5492E-19 21373 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.69 117.46 109.3 28.427 0 130.96 68.749 107.3 102 28 0 121 75 102 2 1 0 2 2 1 57152 3133 919;937 3042 7334;7335;7336 8432;8433;8434 8434 3 DLASVNNLLK Unmodified 1085.6081 0.60807369 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 69.505 69.505 2 1.7953E-21 25616 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 186.78 115.4 345.83 197.32 386.48 112.36 415.5 451.85 325 194 370 111 417 435 3 2 3 1 4 4 63885 3134 551 3043 7337;7338;7339;7340 8435;8436;8437;8438 8438 4 DLASVQALLR Unmodified 1084.6241 0.6240581 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10 2.16 1 1 1 73.454 73.454 2 1.7438E-05 27616 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.86 78.023 609.69 1071.4 725.82 677.08 1198.9 536.72 576 1057 741 675 1190 512 4 5 3 4 5 2 275740 3135 551 3044 7341;7342;7343 8439;8440;8441;8442;8443;8444 8444 6 DLATDLSLIEVK Unmodified 1315.7235 0.72349737 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 84.122 84.122 3 3.5613E-12 31217 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.77 78.981 147.88 240.8 263.26 142.46 279.71 270.25 139 240 260 139 279 260 3 6 6 4 5 5 74805 3136 1424 3045 7344;7345;7346;7347 8445;8446;8447;8448;8449;8450;8451;8452;8453 8447 9 DLCDVVASK Unmodified 1005.4801 0.48009598 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 6 0 1 58.843 58.843 3 0.030809 19476 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.863 18.925 59.687 24.993 46.293 37.682 0 49.036 56 28 46 37 0 46 1 1 1 1 0 1 2001.3 3137 2741 3046 7348 8454 8454 1 DLDADREVTFLEASR Unmodified 1735.8377 0.83769228 1633 P56371 Rab4a Ras-related protein Rab-4A yes yes 0 0 0 1 3 0 1 62.881 62.881 3 0.0423 22542 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.983 19.111 29.856 37.355 0 39.614 43.96 68.036 28 37 0 37 46 65 1 1 0 1 1 1 2549 3138 1633 3047 7349 8455 8455 1 DLDAPDDVDFF Unmodified 1267.5245 0.52446322 2877 Q99MR6;A0A0G2JDF8 Srrt Serrate RNA effector molecule homolog yes no 0 0 0 0 6 4.97 1 1 1 90.154 90.154 2 5.6826E-05 29436 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.458 81.918 4.2774 67.808 0 47.739 3.9172 39.33 4 64 0 44 4 37 1 3 0 3 1 3 7546 3139 2877 3048 7350;7351;7352 8456;8457;8458;8459 8457 4 DLDDFQSWLSR Unmodified 1380.631 0.63099397 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 81.821 81.821 2;3 9.4208E-09 30293 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.39 99.191 148.21 186.08 109.74 87.243 104.2 96.447 139 186 111 84 102 92 3 4 3 3 2 2 20258 3140 2148 3049 7353;7354;7355;7356 8460;8461;8462;8463;8464 8460 5 DLDDLKK Unmodified 845.44945 0.44944778 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 7 0 1 51.597 51.597 3 0.030119 15343 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.127 0 703.97 574.12 942.1 805.94 770.61 940.61 664 599 939 802 803 903 1 1 1 1 1 1 186680 3141 106 3050 7357 8465 8465 1 DLDDTSVVEDGR Unmodified 1319.5841 0.58410336 1975 Q3UH93 Plxnd1 Plexin-D1 yes yes 0 0 0 0 1 0 1 49.779 49.779 2 4.4733E-05 14855 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.946 63.52 20.33 0 9.6355 0 23.385 19.587 19 0 9 0 23 19 1 0 1 0 1 1 2214 3142 1975 3051 7358 8466 8466 1 DLDELLDEVETK Unmodified 1417.6824 0.68242042 595 B1AV75;Q3UJP5 2610301B20Rik Protein C8orf37 homolog yes no 0 0 0 0 8.5 4.5 1 1 87.173 87.173 2;3 0.0011496 33129 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.728 34.769 12.782 8.572 8.5002 14.795 0 0 12 9 9 14 0 0 1 1 1 1 0 0 605.24 3143 595 3052 7359;7360 8467;8468 8467 2 DLDESSGVR Unmodified 976.44615 0.44615331 127 A0A0N4SV15;Q80UY2 Kcmf1 E3 ubiquitin-protein ligase KCMF1 yes no 0 0 0 0 3 0 1 36.717 36.717 2 0.006812 10535 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.879 25.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3144 127 3053 7361 8469 8469 1 DLDINRPGTVPNAK Unmodified 1508.7947 0.79470526 2454 Q8BTG7;A0A1D5RMH3 Ndrg4 Protein NDRG4 yes no 0 0 0 1 6 0 1 49.849 49.849 3 0.00012657 15266 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.185 49.177 88.59 92.978 0 0 133.73 65.474 83 93 0 0 130 65 1 1 0 0 1 1 9316.5 3145 2454 3054 7362 8470 8470 1 DLDKPFLLPVESVYSIPGR Unmodified 2144.1518 0.1517562 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 1 9.25 2.28 1 1 1 1 83.79 83.79 3 1.4754E-07 30494 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.21 85.439 223.48 162.87 172.22 55.002 179.54 194.56 209 158 171 56 176 185 3 3 4 2 3 4 59879 3146 2361 3055 7363;7364;7365;7366 8471;8472;8473;8474;8475 8471 5 DLDPEREVTFLEASR Unmodified 1775.869 0.86899241 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B yes yes 0 0 0 1 3 0 1 68.295 68.295 3 0.0017294 25079 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.104 40.058 20.134 28.121 18.769 0 28.291 29.041 19 28 19 0 28 28 1 1 1 0 1 1 2953.8 3147 2785 3056 7367 8476 8476 1 DLDTGEEVTR Unmodified 1133.52 0.52004654 1965 Q3UDE2 Ttll12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 0 1.5 0.5 1 1 42.17 42.17 2 2.114E-08 11913 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.9 101.53 35.012 38.566 71.92 78.433 76.67 38.295 33 39 72 77 78 37 1 1 2 2 2 1 18422 3148 1965 3057 7368;7369 8477;8478 8477 2 DLDVAVLVGSMPR Unmodified 1370.7228 0.72278587 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 0 0 0 8.5 2.69 1 1 1 1 81.541 81.541 2;3 2.7347E-18 29373 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.16 112.79 88.766 119.92 347.76 110.1 111.61 146.93 84 121 333 112 111 139 3 4 7 3 3 4 66943 3149 1373 3058 7370;7371;7372;7373 8479;8480;8481;8482;8483;8484;8485 8480 7 DLDVGGTHK Unmodified 940.46141 0.46140945 3278 Q9QYI5 Dnajb2 DnaJ homolog subfamily B member 2 yes yes 0 0 0 0 5 0 1 40.631 40.631 3 0.028134 11523 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.997 8.9758 0 39.368 0 39.747 36.876 0 0 37 0 37 37 0 0 1 0 1 1 0 3808.7 3150 3278 3059 7374 8486 8486 1 DLDVITIPSK Unmodified 1099.6125 0.61249036 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 6 0 1 70.662 70.662 3 0.0027094 25106 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.353 31.88 49.189 0 28.359 37.909 44.734 47.759 46 0 28 37 46 46 1 0 1 1 1 1 3024.8 3151 810 3060 7375 8487 8487 1 DLDYTHLEEK Unmodified 1261.5826 0.5826468 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 4 0 1 54.547 54.547 3 0.047752 18401 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.625 16.02 39.468 46.283 0 40.441 0 29.848 37 46 0 37 0 28 1 1 0 1 0 1 4552.6 3152 2424 3061 7376 8488 8488 1 DLDYYATLLK Unmodified 1213.6231 0.62305505 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 7 0 1 80.951 80.951 3 0.0090367 29046 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.79 19.381 9.31 48.022 17.63 0 0 20.254 9 46 19 0 0 19 1 1 1 0 0 1 1666 3153 1203 3062 7377 8489 8489 1 DLEAISAR Unmodified 873.4556 0.45559579 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7.33 4.03 1 1 1 47.321 47.321 2 0.01144 15161 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.429 28.182 226.92 249.67 61.774 224.58 287.83 272.39 213 250 65 213 296 262 2 2 1 2 3 2 54860 3154 2186 3063 7378;7379;7380 8490;8491;8492 8490 3 DLEALMLDR Unmodified 1074.5379 0.53794521 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 8 3.56 1 1 1 72.869 72.869 2 0.0021425 26743 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.331 21.118 59.658 123.95 133.62 122.25 108.32 166.18 56 121 129 121 111 157 1 2 2 3 2 2 19767 3155 3022 3064 7381;7382;7383 8493;8494;8495 8493 3 DLEAPEVQESYR Unmodified 1434.6627 0.66268803 1970 Q3UF95;Q9Z1R2 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 3 0 1 52.74 52.74 2 0.0011376 17870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.159 35.745 0 0 39.716 7.1336 17.88 48.526 0 0 37 9 19 46 0 0 1 1 1 1 4954.5 3156 1970 3065 7384 8496 8496 1 DLEASIAR Unmodified 873.4556 0.45559579 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 4 0 1 47.115 47.115 2 0.027739 14793 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.665 18.295 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 14949 3157 3204 3066 7385 8497 8497 1 DLEDETLWVEER Unmodified 1532.6995 0.69946747 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 1.5 0.5 1 1 70.665 70.665 2;3 1.1369E-12 23931 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.19 92.318 12.689 20.55 21.693 6.1035 13.535 24.132 12 21 21 7 14 23 1 2 1 1 1 1 5703.2 3158 893 3067 7386;7387 8498;8499 8498 2 DLEDEVQMLK Unmodified 1218.5802 0.58020395 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 4 0 1 72.471 72.471 3 0.00082601 26483 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.162 48.945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3159 2249 3068 7388 8500 8500 1 DLEDKEGEIQAGAK Unmodified 1501.726 0.72601657 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 1 4 0 1 52.654 52.654 3 0.0042647 17532 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.279 35.438 118.3 160.14 0 0 151.55 94.813 111 158 0 0 148 93 1 1 0 0 1 1 6094.8 3160 539 3069 7389 8501 8501 1 DLEDLQILIK Unmodified 1198.6809 0.68090428 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 85.048 85.048 2;3 0.00013203 31014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.06 36.756 39.464 9.4378 77.553 39.286 58.576 9.594 37 9 74 38 56 9 1 1 3 2 1 1 5403.4 3161 2843 3070 7390;7391 8502;8503;8504 8504 3 DLEEWNQR Unmodified 1088.4887 0.48868683 2197 Q6IRU5;F7BHJ0 Cltb Clathrin light chain B yes no 0 0 0 0 9 4 1 1 50.043 50.043 2 0.008163 16180 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.56 68.755 322.27 236.23 98.891 305.45 298.99 327.26 302 244 102 290 310 315 2 2 1 2 2 2 39592 3162 2197 3071 7392;7393 8505;8506 8505 2 DLEFTIYDDDDVSPFLDGLEERPQR Unmodified 2983.3723 0.37232625 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 1 4 0 1 88.203 88.203 4 2.3248E-16 33389 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.561 55.517 12.818 0 9.6734 0 0 0 12 0 9 0 0 0 1 0 1 0 0 0 1897.4 3163 3313 3072 7394 8507 8507 1 DLEGQLSDLEQR Unmodified 1401.6736 0.67358707 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 3 0 1 62.534 62.534 2 3.8678E-09 22398 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.55 65.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3164 3402 3073 7395 8508 8508 1 DLEGSDIDTR Unmodified 1119.5044 0.50439647 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 0 1.5 0.5 1 1 43.605 43.605 2 7.3885E-07 13389 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 134.25 75.266 137.39 61.993 119.42 134.97 0 176.96 129 65 120 130 0 166 2 1 2 2 0 2 26988 3165 3186 3074 7396;7397 8509;8510 8510 2 DLEHLSK Unmodified 840.43413 0.43413207 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 5 0 1 44.994 44.994 3 0.034322 13555 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.676 15.573 60.088 0 0 59.981 65.235 0 56 0 0 56 65 0 1 0 0 1 1 0 1437 3166 193 3075 7398 8511 8511 1 DLEIERPILGQNDNR Unmodified 1780.9068 0.9067749 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 0 0 0 1 4.5 0.5 1 1 56.394 56.394 3 6.6931E-05 19306 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.3 68.68 97.566 35.15 163.51 108.66 155.34 143.74 92 37 158 111 158 139 2 1 2 2 2 2 24046 3167 2687 3076 7399;7400 8512;8513 8512 2 DLEIERPILGQNDNR Deamidation (N) 1781.8908 0.89079049 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 0 1 0 1 4 0 1 59.726 59.726 3 0.0043148 20908 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.918 41.157 29.865 0 30.145 0 38.702 0 28 0 28 0 37 0 1 0 1 0 1 0 3017.2 3168 2687 3076 7401 8514 8514 966 1 DLEIVLCSEPPV Unmodified 1369.6799 0.679918 1892 Q08331 Calb2 Calretinin yes yes 0 0 0 0 4.5 0.5 1 1 88.883 88.883 2 0.0034395 33995 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.159 43.018 9.612 27.928 0 20.767 0 0 9 28 0 19 0 0 1 2 0 1 0 0 4517.8 3169 1892 3077 7402;7403 8515;8516 8516 2 DLELTDLAER Unmodified 1173.5877 0.58773217 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 6.25 3.96 1 1 1 1 65.049 65.049 2 5.2479E-07 23510 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 135.63 64.02 296.8 420.26 204.1 407.02 376.66 464.69 279 417 204 390 391 446 3 5 3 5 4 5 92285 3170 20;2354 3078 7404;7405;7406;7407 8517;8518;8519;8520;8521 8517 5 DLELTPTSGTLCGSLSGK Unmodified 1834.8982 0.89824363 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 6 0 1 70.366 70.366 3 7.9912E-05 24996 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.712 41.223 29.928 0 19.566 18.889 37.834 0 28 0 19 19 37 0 1 0 1 1 1 0 3725.7 3171 3341 3079 7408 8522 8522 1 DLEPDYPTYLSSSTSSIGGISSR Unmodified 2431.1391 0.13907884 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 5 0 1 72.832 72.832 3 1.7642E-10 26633 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.525 61.237 20.292 8.0547 9.1524 0 19.564 9.0357 19 9 9 0 19 9 1 1 1 0 1 1 2489.3 3172 3285 3080 7409 8523 8523 1 DLEQIFCQFDPK Unmodified 1538.7075 0.70752973 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 7 0 1 88.387 88.387 3 0.029326 32685 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.577 18.704 0 0 20.173 8.6347 0 20.254 0 0 19 9 0 19 0 0 1 1 0 1 2657.6 3173 628 3081 7410 8524 8524 1 DLEQKDEHLELR Unmodified 1523.758 0.7579854 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 4 0.816 1 1 1 47.621 47.621 4 3.7128E-12 15097 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.04 84.737 305.9 226.43 470.29 203.22 50.881 465.46 287 222 457 194 56 438 2 3 4 2 1 2 26545 3174 510 3082 7411;7412;7413 8525;8526;8527;8528 8527 4 DLESDIIGDTSGHFQK Unmodified 1760.8217 0.82170787 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4.5 0.5 1 1 65.901 65.901 3;4 0.00063403 23353 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.823 30.625 59.322 36.908 97.397 16.06 36.975 28.793 56 37 93 19 37 28 2 1 2 1 1 1 6151 3175 1050;1380 3083 7414;7415 8529;8530 8530 2 DLETSCSDTR Unmodified 1182.4823 0.48228082 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 2 0.707 1 2 1 34.282 34.282 2;3 3.0737E-07 9345 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 139.02 115.44 9.657 39.054 57.124 68.401 93.128 78.338 9 37 56 65 93 74 1 2 2 3 2 3 24607 3176 895 3084 7416;7417;7418;7419 8531;8532;8533;8534;8535 8535 5 DLEVPGYR Unmodified 947.47125 0.47124585 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 5 0 1 53.952 53.952 2 0.045882 18052 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.313 22.714 48.95 25.71 46.759 27.467 18.612 0 46 28 46 28 19 0 1 1 1 1 1 0 24463 3177 2317 3085 7420 8536 8536 1 DLEVVAR Unmodified 800.43922 0.43921744 1544;502 A2APL5;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 5 0 1 46.945 46.945 2 0.051549 14512 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.134 22.38 0 0 0 109.4 111.08 0 0 0 0 102 111 0 0 0 0 1 1 0 11368 3178 502;1544 3086 7421 8537 8537 1 DLFDPIIEER Unmodified 1245.6241 0.62411768 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 75.004 75.004 2;3 4.6101E-21 27628 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 183.43 109.06 778.84 290.05 316.02 463.76 1264.9 464.74 728 288 308 456 1244 452 6 4 3 6 7 4 457660 3179 1883 3087 7422;7423;7424;7425;7426 8538;8539;8540;8541;8542;8543;8544;8545;8546 8539 9 DLFEDELVPLFEK Unmodified 1592.7974 0.7973906 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UZ48;G3UWM1 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 9 4 1 1 95.632 95.632 3 8.7319E-05 35493 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.543 63.714 0 19.989 13.563 8.6623 76.424 47.411 0 19 14 9 75 46 0 1 1 1 2 1 5951.3 3180 218 3088 7427;7428 8547;8548 8547 2 DLFIDGR Unmodified 834.42357 0.42356738 889;818 E9Q2X2;Q6P9K9;A0A087WPQ9;E9Q5N7;E9PUN0;E9PUM9;E9Q7X7 Nrxn3;Nrxn2 Neurexin-3 no no 0 0 0 0 5 0 1 57.598 57.598 2 0.020145 19603 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.097 7.9631 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3181 889;818 3089 7429 8549 8549 1 DLFPYEESK Unmodified 1126.5183 0.51825563 1605 P51859;E0CXA0;E0CYW7 Hdgf Hepatoma-derived growth factor yes no 0 0 0 0 9.5 3.5 1 1 64.057 64.057 3 0.0046406 22991 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.78 17.576 39.413 58.516 112.27 92.536 128.78 85.869 37 56 111 93 130 84 1 1 2 2 2 2 7163.9 3182 1605 3090 7430;7431 8550;8551 8551 2 DLFQKPEVSTVK Unmodified 1389.7504 0.75038083 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 1 10 2.16 1 1 1 60.405 60.405 3 0.00054491 18126 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.875 55.599 563.5 435.41 322.69 424.91 545.36 608.05 529 450 333 412 560 585 3 3 2 2 3 3 37909 3183 2585 3091 7432;7433;7434 8552;8553;8554 8553 3 DLFQVAFNR Unmodified 1108.5665 0.56654322 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 72.868 72.868 2 0.026549 21894 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.91 14.54 88.333 41.536 86.869 0 67.99 0 83 46 83 0 65 0 1 1 1 0 1 0 5774.6 3184 3204 3092 7435 8555 8555 1 DLFSDGHSEFLK Unmodified 1393.6514 0.65139506 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 6 1 1 1 65.407 65.407 3 0.00012385 23170 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.081 59.231 117.46 117.87 176.91 131.55 0 39.442 111 121 176 130 0 37 2 2 2 2 0 1 16526 3185 1470 3093 7436;7437 8556;8557 8556 2 DLFTCTIK Unmodified 996.49502 0.49501776 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 65.478 65.478 2;3 0.0050889 21152 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.89 61.724 88.222 81.162 71.872 64.696 109.84 96.004 83 83 74 65 111 93 1 1 1 1 1 1 11391 3186 2264 3094 7438;7439 8558;8559 8558 2 DLGADYVLTEEELR Unmodified 1621.7835 0.78353145 3150 Q9DCS3 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 3 0 1 72.006 72.006 3 0.029061 26859 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.028 23.77 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2277.8 3187 3150 3095 7440 8560 8560 1 DLGAQGAVAEAELAEAQR Unmodified 1797.8857 0.88570511 2103 Q61001 Lama5 Laminin subunit alpha-5 yes yes 0 0 0 0 3 0 1 64.63 64.63 3 9.5148E-05 23292 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.719 35.862 9.5993 0 9.6896 0 0 9.594 9 0 9 0 0 9 1 0 1 0 0 1 2377.6 3188 2103 3096 7441 8561 8561 1 DLGATWVVLGHSER Unmodified 1538.7841 0.78414057 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 9.25 2.28 1 1 1 1 64.19 64.19 3 2.8724E-29 21251 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 155.57 128.79 305.93 225.73 499.74 720.27 277.19 697.52 287 213 484 691 288 660 4 2 5 7 3 4 433350 3189 1405 3097 7442;7443;7444;7445 8562;8563;8564;8565;8566;8567;8568 8562 7 DLGAVAQVHAENGDIVEEEQKR Unmodified 2406.1775 0.17753003 207 Q3TMU8;A0A0R4J1N0;O35098;D3Z360 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 1 3.5 0.5 1 1 53.405 53.405 4 1.8791E-09 17872 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.847 51.201 88.822 0 39.786 0 85.5 38.375 83 0 37 0 83 37 2 0 1 0 2 1 8240.1 3190 207 3098 7446;7447 8569;8570 8570 2 DLGEAALNEYLR Unmodified 1362.6779 0.67794416 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 4.5 0.5 1 1 71.342 71.342 3 6.5134E-05 26018 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.911 52.732 59.263 75.516 83.132 69.102 34.916 118.4 56 74 84 66 38 112 3 2 3 2 2 3 3684.2 3191 2633 3099 7448;7449 8571;8572;8573;8574;8575 8573 5 DLGEEHFK Unmodified 973.45051 0.45051041 656 CON__P02769 yes yes 0 0 0 0 4 0 1 46.272 46.272 3 0.019849 14450 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.157 33.006 0 0 80.068 0 38.702 0 0 0 74 0 37 0 0 0 1 0 1 0 4997.8 + 3192 656 3100 7450 8576 8576 1 DLGFTEDK Unmodified 923.42363 0.42362696 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8.5 4.5 1 1 56.278 56.278 2 0.022398 19459 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.827 34.718 0 134.34 238.26 0 0 247.31 0 130 226 0 0 232 0 2 1 0 0 2 12788 3193 1275 3101 7451;7452 8577;8578 8577 2 DLGGNAK Unmodified 673.3395 0.3395034 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 10 3 1 1 37.152 37.152 2 0.017391 9896 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.61 47.77 323 300.14 282.65 243.36 402.73 374.4 304 307 281 245 408 362 2 2 1 2 2 2 57580 3194 307 3102 7453;7454 8579;8580 8580 2 DLGLAFEIPAHIK Unmodified 1422.7871 0.78710068 2744 Q91VR5;A0A1Y7VM48 Ddx1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 0 7.5 0.5 1 1 75.741 75.741 3 8.7319E-05 25972 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.543 51.715 97.814 55.185 104.9 37.314 45.421 97.842 92 56 102 37 46 93 2 1 2 1 1 2 10025 3195 2744 3103 7455;7456 8581;8582 8582 2 DLGLPTEAYISVEEVHDDGTPTSK Unmodified 2572.2181 0.21805744 1459 P26516 Psmd7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 0 4.33 0.471 2 1 72.849 72.849 3;4 0.0017327 26728 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.715 18.031 30.044 0 30.296 39.766 35.885 88.52 28 0 28 37 37 84 1 0 1 1 1 2 4855.7 3196 1459 3104 7457;7458;7459 8583;8584;8585 8584 3 DLGPVAPAPIK Unmodified 1076.623 0.62299547 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8 2.61 2 1 1 1 60.543 60.543 2;3 5.0452E-08 20421 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.35 73.315 237.57 163.88 281.57 184.03 451.2 169.5 223 166 278 186 445 166 3 4 5 4 5 3 41923 3197 2295 3105 7460;7461;7462;7463;7464 8586;8587;8588;8589;8590 8587 5 DLGQDLAGVIAIQR Unmodified 1467.8045 0.80454166 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 7 0 1 77.174 77.174 3 0.00186 27308 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.527 30.472 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 1589.6 3198 893 3106 7465 8591 8591 1 DLGQFYAGLSGEAYPIIK Unmodified 1940.9884 0.98837927 2710 Q8VEH5 Epm2aip1 EPM2A-interacting protein 1 yes yes 0 0 0 0 13 0 1 87.319 87.319 3 0.0094304 34438 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 38.915 20.777 0 29.152 38.285 0 0 29.848 0 28 37 0 0 28 0 1 1 0 0 1 2744.3 3199 2710 3107 7466 8592 8592 1 DLGQIEENDLVR Unmodified 1399.6943 0.69432251 617 B2RQC7;Q3UH60 Dip2b Disco-interacting protein 2 homolog B yes no 0 0 0 0 3.5 0.5 1 1 62.101 62.101 2 0.00079279 22185 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.017 45.475 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 1989.2 3200 617 3108 7467;7468 8593;8594 8593 2 DLGQVAAQEAER Unmodified 1285.6262 0.62624295 2941 Q9CQT1;F8WI95 Mri1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 0 4 0 1 48.718 48.718 3 0.034498 15657 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.509 15.522 0 38.901 27.962 0 0 29.848 0 37 28 0 0 28 0 1 1 0 0 1 2021.4 3201 2941 3109 7469 8595 8595 1 DLGTDSQIFISR Unmodified 1350.6779 0.67794416 2132 Q61598 Gdi2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 0 8 3.56 1 1 1 64.092 64.092 2 2.3556E-11 22591 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.71 76.712 99.514 54.487 40.034 0 132.71 174.24 93 55 37 0 130 167 2 1 1 0 2 3 42437 3202 2132 3110 7470;7471;7472 8596;8597;8598 8596 3 DLGYIYFYQR Unmodified 1336.6452 0.64518747 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 10 2.16 1 1 1 72.83 72.83 2 8.3405E-05 24662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.52 85.734 99.09 150.16 159.13 136.33 217.65 75.645 93 148 158 130 213 74 2 2 2 2 2 1 25451 3203 1641 3111 7473;7474;7475 8599;8600;8601 8599 3 DLHWPEEEFGK Unmodified 1385.6252 0.62518031 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 8 3.56 1 1 1 64.96 64.96 3 8.8218E-05 23074 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.465 78.709 148.49 276.28 344.21 179.95 436.76 540.79 139 270 334 175 436 519 2 4 5 3 5 6 29287 3204 2301 3112 7476;7477;7478 8602;8603;8604;8605;8606;8607 8603 6 DLIEDLKYELTGK Unmodified 1535.8083 0.80828964 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 1 7 0 1 91.413 91.413 3 0.0097088 33876 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.013 38.867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3205 1050;1380 3113 7479 8608 8608 1 DLIGVQNLLK Unmodified 1111.6601 0.66010926 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10 1.63 1 2 1 1 1 77.223 77.223 2;3 9.5552E-06 25967 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.5 19.398 217.44 203.64 131.31 148.63 48.116 118.33 204 204 130 140 46 111 4 4 3 3 1 2 76790 3206 551 3114 7480;7481;7482;7483;7484;7485 8609;8610;8611;8612;8613;8614 8610 6 DLIHDQDEEEEEEEGQR Unmodified 2098.8563 0.85631505 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 13 0 1 42.418 42.418 3 2.3287E-25 12659 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.33 128.75 30.044 0 0 50.864 26.952 0 28 0 0 47 28 0 1 0 0 1 1 0 6630.8 3207 3000 3115 7486 8615 8615 1 DLIITPATVLK Unmodified 1182.7224 0.72237516 1443 Q8CBC8;P24288;E9Q4K3;B2KFA8;B2KFA9 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 10 2.16 1 1 1 78.149 78.149 2;3 0.00061075 26453 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.058 23.104 78.519 63.345 123.77 66.301 104.97 29.848 74 66 121 65 102 28 2 2 3 2 2 1 14745 3208 1443 3116 7487;7488;7489 8616;8617;8618 8617 3 DLINLAK Unmodified 785.4647 0.46470391 1522 P35550 Fbl rRNA 2'-O-methyltransferase fibrillarin yes yes 0 0 0 0 8 0 1 63.706 63.706 2 0.025802 20310 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.19 18.891 0 58.517 63.824 67.241 0 0 0 56 65 65 0 0 0 1 1 1 0 0 3551.4 3209 1522 3117 7490 8619 8619 1 DLISHDELFSDIYK Unmodified 1693.8199 0.81991695 1764 P63028 Tpt1 Translationally-controlled tumor protein yes yes 0 0 0 0 8.17 3.48 2 1 1 2 73.832 73.832 3;4 5.6047E-25 27714 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.71 116.73 503.02 521.46 383.62 385.79 559.22 328.15 473 528 389 371 557 315 6 7 5 4 5 4 87639 3210 1764 3118 7491;7492;7493;7494;7495;7496 8620;8621;8622;8623;8624;8625;8626 8626 7 DLIVATVAVK Unmodified 1027.6277 0.6277465 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 9 0 1 69.328 69.328 2 0.0084186 22333 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.847 37.618 48.813 55.548 44.558 36.715 56.889 0 46 56 46 37 56 0 1 1 1 1 1 0 3628.1 3211 2977 3119 7497 8627 8627 1 DLKLDNVMLDAEGHIK Unmodified 1809.9295 0.92948418 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 1 6 0 1 69.125 69.125 4 0.00046387 24338 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.765 37.972 48.608 34.472 96.798 34.004 35.491 48.023 46 37 93 37 37 46 1 1 1 1 1 1 4970.1 3212 1783 3120 7498 8628 8628 1 DLKLDNVMLDSEGHIK Unmodified 1825.9244 0.9243988 1796;2030 P68404;Q4VA93;Q3TQ39 Prkcb;Prkca Protein kinase C beta type;Protein kinase C no no 0 0 0 1 6 0 1 65.001 65.001 4 2.9455E-05 22348 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.813 0 0 0 0 59.847 72.346 67.226 0 0 0 56 74 65 0 0 0 1 1 1 4125.9 3213 1796;2030 3121 7499 8629 8629 1 DLKPENLLIDQQGYIQVTDFGFAK Unmodified 2751.4119 0.41194665 1310 P05132 Prkaca cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 0 1 7 0 1 88.061 88.061 5 0.015165 32463 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.706 14.611 9.657 0 0 0 19.874 0 9 0 0 0 19 0 1 0 0 0 1 0 613.51 3214 1310 3122 7500 8630 8630 1 DLKPENLLLASK Unmodified 1339.7711 0.77111627 1475;1355;2818;103 P11798;F8WIS9;F6WHR9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;Q923T9;A0A2I3BQP6 Camk2a;Camk2b;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 1 8.5 2.06 1 2 2 1 1 1 67.118 67.118 2;3;4 4.1859E-13 22073 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.54 91.36 2560.8 2727.7 2542.3 2647.9 2400.3 3389.6 2411 2762 2572 2596 2520 3244 8 8 8 7 7 8 983390 3215 1355;1475;103;2818 3123 7501;7502;7503;7504;7505;7506;7507;7508 8631;8632;8633;8634;8635;8636;8637;8638;8639 8635 9 DLKPENLLLASK Deamidation (N) 1340.7551 0.75513185 1475;1355;2818;103 P11798;F8WIS9;F6WHR9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;Q923T9;A0A2I3BQP6 Camk2a;Camk2b;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 1 0 1 6 0 1 66.925 66.925 3 0.026641 23289 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.298 35.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3216 1355;1475;103;2818 3123 7509 8640 8640 31 1 DLKPENLLYYSQDEESK Unmodified 2069.9793 0.97933072 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 1 9 4 1 1 67.74 67.74 3;4 1.068E-05 24550 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.809 50.01 88.241 162.16 58.528 125.18 132.34 212.62 83 158 56 120 139 203 1 1 1 2 2 2 14868 3217 2468 3124 7510;7511 8641;8642 8641 2 DLKPSNIVVK Unmodified 1111.6601 0.66010926 2327 Q80W82;Q3TQZ7;Q8C9D4;Q80W80;E9QN59;Q61831;Q9WTU6;A0A0G2JG69;A0A0G2JGL2;D3Z1Z4;A6P3E4;Q7TSJ7;G3X8U9;Q91Y86 Mapk10;Mapk9;Mapk8 Mitogen-activated protein kinase;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 8 yes no 0 0 0 1 8.5 0.5 1 1 54.286 54.286 3 0.0054084 15138 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.355 44.266 295.25 368.62 308.21 485.85 156.01 0 278 370 315 464 158 0 2 3 2 3 1 0 24048 3218 2327 3125 7512;7513 8643;8644;8645 8645 3 DLKPSNLLLNTTCDLK Unmodified 1843.9713 0.97134899 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 1 9.5 0.5 1 1 70.743 70.743 3 0.00099186 22963 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.304 0 88.59 92.978 0 140.03 109.67 0 83 93 0 130 111 0 1 1 0 1 1 0 29891 3219 1769 3126 7514;7515 8646;8647 8646 2 DLLDLLVEAK Unmodified 1127.6438 0.64379049 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 9.25 2.28 1 1 1 1 95.312 95.312 2;3 0.00074552 38112 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.692 42.696 9.5414 9.576 78.938 20.767 106.03 39.422 9 9 73 19 102 38 1 1 3 1 2 2 5439.2 3220 2146 3127 7516;7517;7518;7519 8648;8649;8650;8651 8651 4 DLLDSVLPHLYNETK Unmodified 1755.9043 0.90431529 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 8 0.816 1 1 1 82.563 82.563 3 7.6297E-17 29194 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.97 80.961 78.802 44.601 63.096 117.56 0 59.696 74 46 65 111 0 56 2 1 1 2 0 1 13847 3221 2264 3128 7520;7521;7522 8652;8653;8654 8653 3 DLLEEDELQEQK Unmodified 1487.6991 0.69913312 2234 Q6PB44 Ptpn23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 0 2 0 1 63.06 63.06 3 0.00047219 22249 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.498 40.374 39.564 27.124 0 29.528 57.22 0 37 28 0 28 56 0 1 1 0 1 1 0 2559.2 3222 2234 3129 7523 8655 8655 1 DLLEVADILEK Unmodified 1256.6864 0.68638359 2864 Q99LP6 Grpel1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 90.813 90.813 3 0.00053276 34312 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.64 29.637 18 0 9.738 0 0 39.442 18 0 9 0 0 37 1 0 1 0 0 1 3101.7 3223 2864 3130 7524;7525 8656;8657 8656 2 DLLFILTAK Unmodified 1032.6219 0.62193284 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 90.895 90.895 2;3 0.00042787 25861 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.07 62.502 0 0 43.561 88.269 55.334 37.863 0 0 42 88 56 37 0 0 1 2 1 1 9172.7 3224 1955 3131 7526;7527 8658;8659 8659 2 DLLFQALGR Unmodified 1031.5764 0.57637963 3329 Q9WUA2;A0A087WS80;A0A087WQ15 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 10 0 1 75.418 75.418 2 0.0090415 22741 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.605 38.366 59.281 73.512 73.375 44.525 73.38 57.602 56 74 74 46 74 56 1 1 1 1 1 1 13552 3225 3329 3132 7528 8660 8660 1 DLLFQPVAELK Unmodified 1271.7125 0.71253876 2507 Q8C605;Q9WUA3;F6YL81 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 7.5 0.5 1 1 81.092 81.092 2;3 0.00053276 29137 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.64 41.697 49.176 55.455 48.608 40.441 38.702 39.442 46 56 46 37 37 37 1 2 1 1 1 1 21525 3226 2507 3133 7529;7530 8661;8662 8661 2 DLLGEEDIPR Unmodified 1155.5772 0.57716749 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 3 0.816 1 1 1 61.334 61.334 2 5.2034E-05 21416 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 112.75 62.141 115.85 87.296 100.67 117.13 134.03 174.2 112 83 102 112 139 167 3 1 2 2 3 3 17625 3227 407 3134 7531;7532;7533 8663;8664;8665;8666 8663 4 DLLGEEDIPREPR Unmodified 1537.7736 0.77363546 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 1 3 0.816 1 1 1 54.967 54.967 3 1.3124E-13 18992 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.29 103.17 69.366 75.123 70.33 0 83.165 106.36 65 75 65 0 83 102 2 2 1 0 1 1 47987 3228 407 3135 7534;7535;7536 8667;8668;8669 8668 3 DLLHPSPEEEK Unmodified 1292.6248 0.62484596 85 A0A0G2JDW7;A0A0G2JG29;Q6ZWU9 Rps27 40S ribosomal protein S27 yes no 0 0 0 0 3.5 0.5 1 1 48.679 48.679 3 0.00035966 15567 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.632 48.102 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3229 85 3136 7537;7538 8670;8671 8671 2 DLLLQLEDETLK Unmodified 1428.7712 0.77117585 222 A0A0R4J2C6;A0A0R4J2C1;Q9QXJ1;A0A087WR62;A0A087WPS7;A0A087WPI2;A0A1B0GR67;A0A087WRP1;A0A087WQH0 Apbb1 Amyloid beta A4 precursor protein-binding family B member 1 yes no 0 0 0 0 5 0 1 87.781 87.781 3 0.00031856 33567 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.03 43.813 9.5015 14.017 14.259 0 0 0 9 14 14 0 0 0 1 1 1 0 0 0 487.43 3230 222 3137 7539 8672 8672 1 DLLPLLPGAIAGEIESK Unmodified 1734.9768 0.97675195 1895 Q0VBD0 Itgb8 Integrin beta yes yes 0 0 0 0 7 0 1 95.749 95.749 3 0.0051239 35290 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.554 21.976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3231 1895 3138 7540 8673 8673 1 DLLQFFKPR Unmodified 1162.6499 0.64987892 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 1 6.5 5.5 1 1 75.443 75.443 3 0.0032801 26051 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.948 47.523 253.39 181.13 29.073 245 363.92 253.64 237 185 28 232 367 247 2 1 1 3 3 2 24672 3232 848 3139 7541;7542 8674;8675;8676 8674 3 DLLQNLLK Unmodified 955.57023 0.57023162 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 0 9.5 0.5 1 1 79.438 79.438 2;3 0.002292 24744 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.439 22.615 69.014 82.776 169.65 128.52 184.07 133.33 65 83 167 130 186 130 1 1 2 2 2 2 19044 3233 78 3140 7543;7544 8677;8678 8678 2 DLLSSVSR Unmodified 875.47125 0.47124585 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 7 0 1 53.507 53.507 2 0.01029 16082 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.009 51.173 48.595 64.655 73.483 55.243 84.28 0 46 65 74 56 83 0 1 1 1 1 1 0 13751 3234 372 3141 7545 8679 8679 1 DLLSWMESIIR Unmodified 1361.7013 0.70132214 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 11 0 1 107.91 107.91 2 0.0013267 35365 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.298 44.052 6.408 5.9519 12.984 6.558 12.015 15.647 6 6 12 6 12 15 1 1 1 1 1 1 1143 3235 893 3142 7546 8680;8681 8680 2 DLLTAYYDVDYEK Unmodified 1606.7403 0.74026965 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 7.4 2.87 1 2 1 1 77.975 77.975 2;3 1.989E-15 29271 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.99 93.606 88.341 94.772 129.98 102.07 88.633 136.05 83 93 130 102 92 130 2 2 3 3 2 2 24608 3236 1470 3143 7547;7548;7549;7550;7551 8682;8683;8684;8685;8686 8682 5 DLLVDQTIEK Unmodified 1172.6289 0.62886871 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 0 5 0 1 65.445 65.445 3 0.00066103 23192 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.865 0 0 47.653 77.209 0 37.384 38.375 0 46 74 0 37 37 0 1 1 0 1 1 3271.7 3237 1171 3144 7552 8687 8687 1 DLLWGNAIFLK Unmodified 1288.718 0.71795849 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 10.5 0.5 1 1 90.375 90.375 2;3 0.00048915 29382 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.693 43.749 29.865 0 39.883 0 38.702 20.254 28 0 37 0 37 19 1 0 2 0 1 1 3346.7 3238 24 3145 7553;7554 8688;8689 8688 2 DLMLWMEDVIR Unmodified 1419.689 0.6890429 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 2.35 1 2 1 98.626 98.626 2;3 3.3072E-10 36133 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 140.07 94.914 9.5555 6.6121 11.457 19 9.0934 9.3345 9 7 11 19 9 9 1 1 1 1 1 1 4603.9 3239 2148 3146 7555;7556;7557;7558 8690;8691;8692;8693 8690 4 DLMPHDLAR Unmodified 1066.523 0.52296385 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 5 0 1 47.944 47.944 3 0.023189 14945 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.091 26.544 0 29.315 28.537 0 47.137 28.503 0 28 28 0 46 28 0 1 1 0 1 1 2395.1 3240 2834 3147 7559 8694 8694 1 DLMSWINGIR Deamidation (N) 1204.591 0.59104341 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 8 0 1 88.788 88.788 2 0.00099194 32139 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.68 43.149 25.549 21.418 15.966 22.761 17.748 31.474 24 22 17 22 19 30 1 1 1 1 1 1 3485.5 3241 551 3148 7560 8695 8695 146 1 DLMSWINGIR Unmodified 1203.607 0.60702783 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 11 0.816 1 1 1 86.003 86.003 2 6.2671E-05 27157 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.15 28.89 20.319 92.262 0 86.347 0 89.544 19 88 0 79 0 84 1 2 0 2 0 2 18081 3242 551 3148 7561;7562;7563 8696;8697;8698 8697 3 DLMVGDEASELR Unmodified 1333.6184 0.61838038 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 4.86 3.44 1 2 2 1 1 60.201 60.201 2;3 4.7906E-13 21023 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130.98 81.632 175.81 135.59 147.95 190.76 110.62 183.39 165 139 144 182 111 175 5 5 4 6 3 6 59277 3243 1690 3149 7564;7565;7566;7567;7568;7569;7570 8699;8700;8701;8702;8703;8704;8705;8706 8699 8 DLNAAEALQR Unmodified 1099.5622 0.56218613 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7 3.54 1 1 1 1 50.952 50.952 2;3 0.00084393 16493 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.513 32.384 197.57 279.68 167.14 118.66 238.38 289.55 186 278 167 120 241 278 2 4 1 1 3 4 40288 3244 2186 3150 7571;7572;7573;7574 8707;8708;8709;8710 8708 4 DLNCVPEIADTLGAVAK Unmodified 1784.8978 0.8978497 156 A0A0R4J049;Q8CIG8;A0A2I3BRG2;S4R295 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 0 6 0 1 82.957 82.957 3 0.019347 30864 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.157 19.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3245 156 3151 7575 8711 8711 1 DLNGAVRER Unmodified 1028.5363 0.53630573 3418 yes yes 0 0 0 1 6 0 1 56.663 56.663 3 0.033736 18510 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.982 9.8207 49.176 36.052 0 0 0 49.036 46 37 0 0 0 46 1 1 0 0 0 1 10010 + 3246 3418 3152 7576 8712 8712 1 DLNHVCVISETGK Unmodified 1470.7137 0.71367774 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 6 0 2 52.39 52.39 3;4 0.0031357 16550 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.771 28.166 39.262 45.711 142.94 101.41 82.707 57.336 37 46 139 102 83 56 1 1 2 2 1 1 10050 3247 1295 3153 7577;7578 8713;8714 8714 2 DLNPDVNVFQR Unmodified 1315.6521 0.65206377 1151 K3W4T3;Q9Z1G4;A2A599 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9 4 1 1 62.848 62.848 2;3 6.8931E-11 22484 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.71 96.641 168.69 136.08 26.169 179 105.01 135.58 158 139 28 167 111 130 2 2 1 2 1 1 130210 3248 1151 3154 7579;7580 8715;8716 8716 2 DLNSQADSLMTSSAFDTSQVK Unmodified 2244.0216 0.021606243 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 1 1 1 72.593 72.593 3 5.5963E-11 26601 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.884 67.322 60.006 25.263 28.902 19.044 28.291 29.041 56 28 28 19 28 28 1 2 1 1 1 1 9417.9 3249 551 3155 7581;7582 8717;8718 8717 2 DLNVISSLLK Unmodified 1100.6441 0.64412484 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 0 10 0 1 84.348 84.348 2 0.014584 26826 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.398 27.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3250 48 3156 7583 8719 8719 1 DLNYCFSGMSDHR Unmodified 1600.6399 0.63986087 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 0 5 0 1 53.899 53.899 3 0.027918 17839 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.685 33.444 59.568 34.378 58.229 0 27.301 57.851 56 37 56 0 28 55 1 1 1 0 1 1 2217.7 3251 1209;1808 3157 7584 8720 8720 1 DLPAAAAPAGPASFAR Unmodified 1481.7627 0.76267685 2911 Q9CQ60;Q8CBG6;F6X8L5 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 6 0 1 59.477 59.477 3 0.0082 19796 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.695 25.804 49.358 0 0 0 38.702 0 46 0 0 0 37 0 1 0 0 0 1 0 6096.9 3252 2911 3158 7585 8721 8721 1 DLPAEDSR Unmodified 901.41412 0.4141249 522 A2ATS6;Q7M6Z0 Rtn4rl2 Reticulon-4 receptor-like 2 yes no 0 0 0 0 1 0 1 35.687 35.687 2 0.015019 9336 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.368 34.927 29.749 0 49.622 0 28.62 19.437 28 0 46 0 28 19 1 0 1 0 1 1 5136.2 3253 522 3159 7586 8722 8722 1 DLPDEVR Unmodified 842.4134 0.41339662 1108 G5E8R4;Q922D4 Ppp6r3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 0 2.5 0.5 1 1 43.968 43.968 2 0.041754 13625 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.774 35.272 48.91 35.312 45.326 46.712 45.97 0 46 37 46 46 46 0 1 1 1 1 1 0 5165.3 3254 1108 3160 7587;7588 8723;8724 8723 2 DLPDGPDAPIDR Unmodified 1279.6044 0.60444487 3182 Q9ERB0 Snap29 Synaptosomal-associated protein 29 yes yes 0 0 0 0 2.5 0.5 1 1 52.551 52.551 2 6.1436E-09 17318 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.78 69.785 12.8 15.097 0 20.557 11.179 12.473 12 15 0 19 12 12 1 1 0 1 1 1 5984.7 3255 3182 3161 7589;7590 8725;8726 8725 2 DLPEHAVLK Unmodified 1020.5604 0.56039521 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 5.5 0.5 1 1 48.841 48.841 3 8.3933E-05 14754 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.07 85.038 196 169.28 355.82 190.67 223.63 291.03 185 172 347 195 225 279 2 1 3 2 1 3 44427 3256 2714 3162 7591;7592 8727;8728;8729 8729 3 DLPETVR Unmodified 828.43413 0.43413207 59 A0A0A6YW80;G3X8Y3;Q80UM3 Naa15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 0 0 0 4 0 1 42.518 42.518 2 0.018395 12720 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.699 40.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3257 59 3163 7593 8730 8730 1 DLPIPLITYDAYPK Unmodified 1617.8654 0.86541058 561 A7VK13;Q91V57 Chn1 N-chimaerin yes no 0 0 0 0 7 0 1 87.483 87.483 3 0.00085749 32194 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.042 34.18 20.27 0 19.589 19.458 7.5024 29.634 19 0 19 19 9 28 1 0 1 1 1 1 1012.8 3258 561 3164 7594 8731 8731 1 DLPPVSGSIIWAK Unmodified 1381.7606 0.76055158 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 2.16 1 1 1 77.852 77.852 2;3 3.7552E-06 27106 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.102 47.261 59.723 27.151 38.255 60.735 25.168 38.724 56 28 37 56 28 37 2 1 1 1 1 1 9667.4 3259 3204 3165 7595;7596;7597 8732;8733;8734 8732 3 DLPQYGQK Unmodified 947.47125 0.47124585 2511 Q8C8N2;A0A0N4SVJ6 Scai Protein SCAI yes no 0 0 0 0 6 0 1 48.291 48.291 2 0.027739 14536 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.665 20.498 39.414 56.926 0 0 0 0 37 56 0 0 0 0 1 1 0 0 0 0 3140.5 3260 2511 3166 7598 8735 8735 1 DLPSVQLLMK Unmodified 1142.6369 0.63693097 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.5 0.5 1 1 77.808 77.808 3 0.00062108 27019 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.749 57.896 69.468 54.9 48.135 106.77 98.405 68.032 65 56 46 102 101 65 1 1 1 2 2 1 9795.6 3261 2186 3167 7599;7600 8736;8737 8736 2 DLPVSEQQER Unmodified 1199.5782 0.57823012 3352 Q9WVJ2;E9Q5I9;F6ZQQ3 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 6 4.97 1 1 1 41.302 41.302 2 1.5922E-08 12599 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 148.32 87.16 69.204 63.587 54.225 128.05 51.7 117.92 65 65 56 121 56 112 1 2 1 2 1 2 16032 3262 3352 3168 7601;7602;7603 8738;8739;8740 8739 3 DLQDAENFFQFQGDADDLK Unmodified 2214.9706 0.97055695 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 5 0 1 86.689 86.689 3 1.6207E-07 33129 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.08 60.414 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1670.9 3263 893 3169 7604 8741 8741 1 DLQEEPAPVR Unmodified 1152.5775 0.57750184 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 2 0 1 43.178 43.178 2 5.4205E-05 13225 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.61 68.692 33.769 45.722 56.503 26.385 45.264 47.744 32 46 56 28 46 46 1 1 1 1 1 1 4798.4 3264 2235 3170 7605 8742 8742 1 DLQEFIPLINQITAK Unmodified 1741.9614 0.96143623 328 A0A1W2P7Q6;Q9CRT8 Xpot Exportin-T yes no 0 0 0 0 10 0 1 98.055 98.055 3 0.021332 32011 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.613 15.605 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1135.1 3265 328 3171 7606 8743 8743 1 DLQEPEFSVK Unmodified 1190.5819 0.58191851 2738 Q91VF2 Hnmt Histamine N-methyltransferase yes yes 0 0 0 0 4.5 0.5 1 1 62.122 62.122 2;3 0.0018884 21722 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.08 40.407 39.529 0 57.002 95.116 130.9 46.072 37 0 56 94 130 46 1 0 2 3 2 1 5848.1 3266 2738 3172 7607;7608 8744;8745;8746 8746 3 DLQGMEGEK Unmodified 1005.4437 0.44371047 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 4.5 0.5 1 1 48.94 48.94 2 0.0022519 15766 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.38 46.317 48.91 45.026 37.086 0 56.948 47.411 46 46 37 0 56 46 1 1 1 0 1 1 3664.5 3267 1424 3173 7609;7610 8747;8748 8747 2 DLQLVLPDYFPER Unmodified 1603.8246 0.8246084 221 A0A0R4J2B2;Q6WVG3 Kctd12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 0 8.67 3.09 1 1 1 85.596 85.596 2;3 5.3212E-05 31363 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.59 78.079 20.387 88.965 24.571 69.047 57.647 0 19 84 28 65 56 0 1 2 1 2 2 0 13938 3268 221 3174 7611;7612;7613 8749;8750;8751 8750 3 DLQMVNISLR Unmodified 1187.6332 0.63324258 1179 O35129;F6QPR1;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 8 0 1 68.751 68.751 2 0.0093064 22756 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.548 25.569 59.076 93.449 90.922 85.3 0 59.696 56 93 93 83 0 56 1 1 1 1 0 1 5385.8 3269 1179 3175 7614 8752 8752 1 DLQNVNITLR Unmodified 1184.6513 0.65133548 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 6 0 1 59.793 59.793 2 0.00031372 20022 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.163 53.891 157.61 105.63 110.73 166.09 0 197.21 148 111 111 158 0 185 2 2 1 2 0 2 9194.6 3270 1788 3176 7615 8753;8754 8753 2 DLQQNSEVDR Unmodified 1202.5527 0.55274365 1828 Q3UU93;P80560 Ptprn2 Receptor-type tyrosine-protein phosphatase N2 yes no 0 0 0 0 2 0 1 35.143 35.143 2 1.0529E-05 9497 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 131.09 65.841 0 38 0 0 0 0 0 38 0 0 0 0 0 1 0 0 0 0 3215.3 3271 1828 3177 7616 8755 8755 1 DLQQQSEQLDSVLK Unmodified 1629.821 0.82097959 2670 Q8R570;B2FDF6;I7HFU4;I7HPB1 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 5 0 1 67.761 67.761 3 2.5634E-11 24285 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.77 92.125 0 0 47.248 56.648 92.717 57.05 0 0 46 56 93 56 0 0 1 1 1 1 8003.9 3272 2670 3178 7617 8756 8756 1 DLQQSIEAASDEEDLR Unmodified 1817.8279 0.82791546 2828 Q99JB8 Pacsin3 Protein kinase C and casein kinase II substrate protein 3 yes yes 0 0 0 0 2.5 0.5 1 1 64.727 64.727 3 9.0727E-06 23028 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.548 56.473 39.513 37.355 0 9.837 28.987 8.7668 37 37 0 9 28 9 2 1 0 1 1 1 8065.8 3273 2828 3179 7618;7619 8757;8758 8757 2 DLQSAEK Unmodified 789.38685 0.38684752 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 5 0 1 39.888 39.888 2 0.043962 11054 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.149 26.461 78.444 52.346 116.57 0 0 39.442 74 56 111 0 0 37 1 1 1 0 0 1 4671.5 3274 1553 3180 7620 8759 8759 1 DLQSAEKEEQEK Unmodified 1432.6682 0.66816734 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 1 6.67 4.5 2 2 2 43.447 43.447 3;4 4.1859E-13 12751 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 129.54 71.734 2435.4 1920.1 1850.4 1932.6 1331.9 1942.9 2289 1988 1865 1892 1422 1856 6 6 4 5 5 4 226790 3275 1553 3181 7621;7622;7623;7624;7625;7626 8760;8761;8762;8763;8764;8765 8765 6 DLQVNVEHLVQK Unmodified 1420.7674 0.76742787 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 6 0 1 62.813 62.813 4 0.01103 21416 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.068 22.217 0 20.216 0 30.123 25.55 68.561 0 19 0 28 28 65 0 1 0 1 1 1 3168.3 3276 1568 3182 7627 8766 8766 1 DLQYVEK Unmodified 893.44945 0.44944778 1287 Q8R357;O88998;A3KGE4;G3X9Q7 Olfm1 Noelin yes no 0 0 0 0 5.5 0.5 1 1 52.575 52.575 2 0.019766 16521 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.47 39.044 218.07 162.98 0 121.32 112.81 214.24 204 167 0 111 111 204 2 2 0 1 1 2 21639 3277 1287 3183 7628;7629 8767;8768 8768 2 DLSAAGIGLLAAATQSLSMPASLGR Unmodified 2370.2577 0.25769461 2602 Q8K310;A0A087WSU2;A0A087WQD6;A0A087WNP3;A0A087WPU5;A0A087WPQ5 Matr3;Gm28285 Matrin-3 yes no 0 0 0 0 6.25 5.26 2 1 1 104.15 104.15 3 5.8715E-74 34320 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 168.39 144.92 34.613 19.833 43.441 37.55 9.1667 13.464 33 21 42 38 9 13 4 2 1 4 1 4 36507 3278 2602 3184 7630;7631;7632;7633 8769;8770;8771;8772;8773;8774;8775 8770 7 DLSAAGIGLLAAATQSLSMPASLGR Oxidation (M) 2386.2526 0.25260923 2602 Q8K310;A0A087WSU2;A0A087WQD6;A0A087WNP3;A0A087WPU5;A0A087WPQ5 Matr3;Gm28285 Matrin-3 yes no 0 0 1 0 12 0 1 99.59 99.59 3 3.1715E-07 28385 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.735 43.121 7.511 0 0 2.186 0 7.462 7 0 0 2 0 7 1 0 0 1 0 1 1027.8 3279 2602 3184 7634 8776 8776 177 1 DLSAGAVSAVR Unmodified 1044.5564 0.55637247 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 5 0 1 48.54 48.54 2 3.3889E-14 15304 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 159.34 92.907 99.377 81.611 0 0 103.39 96.188 93 83 0 0 102 93 1 1 0 0 1 1 11780 3280 2487 3185 7635 8777 8777 1 DLSELEEK Unmodified 961.46041 0.4604064 224 A2RTH5;A0A0U1RNF2 Lcmt1 yes no 0 0 0 0 4 0.816 1 1 1 58.389 58.389 2;3 0.0063804 20233 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.11 28.871 118.51 93.623 38.164 67.581 63.236 147.17 111 93 37 65 65 139 2 2 1 2 2 2 11858 3281 224 3186 7636;7637;7638 8778;8779;8780 8779 3 DLSKPIGALNPK Unmodified 1251.7187 0.71868677 3165 Q9EPN1;A0A0A6YXX3;A0A0A6YXL6;E9Q3Y4;Q9ESE1;Q8BSM6 Nbea;Lrba Neurobeachin;Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 1 9 0 1 57.258 57.258 3 0.0024457 16650 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.48 37.731 0 118.1 0 119.24 110.63 0 0 111 0 111 111 0 0 1 0 1 1 0 9756.2 3282 3165 3187 7639 8781 8781 1 DLSLEEIQK Unmodified 1073.5605 0.56045479 1619;1629 P54227;D3Z5N2;D3Z1Z8;P55821 Stmn1;Stmn2 Stathmin;Stathmin-2 no no 0 0 0 0 6.8 3.19 1 1 2 1 63.351 63.351 2;3 3.6629E-25 22543 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 189.7 83.346 263.04 176.08 259.63 353.03 637.51 92.004 247 173 253 340 628 90 4 3 3 4 5 2 101260 3283 1619;1629 3188 7640;7641;7642;7643;7644 8782;8783;8784;8785;8786 8786 5 DLSLQEISAEDMAFR Unmodified 1723.8087 0.80870034 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 4 0 1 77.892 77.892 3 0.0068882 29009 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.947 26.519 0 0 0 20.767 0 20.254 0 0 0 19 0 19 0 0 0 1 0 1 2126.7 3284 2045 3189 7645 8787 8787 1 DLSQMLK Unmodified 833.43169 0.43168922 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 63.682 63.682 2;3 0.0071088 22737 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.297 28.614 553.5 431.74 646.2 381.33 605.84 505.87 521 451 635 383 608 485 5 6 5 4 5 5 119680 3285 1160 3190 7646;7647;7648;7649 8788;8789;8790;8791;8792;8793 8793 6 DLSSHQLNEFLAQVLQK Unmodified 1969.0269 0.026890038 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 9.67 0.471 1 2 87.485 87.485 3;4 2.3749E-12 28158 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.31 91.159 15.999 20.216 16.149 34.252 42.625 41.424 15 19 15 33 43 40 1 1 1 2 2 2 11505 3286 1446 3191 7650;7651;7652 8794;8795;8796 8796 3 DLSSSEK Unmodified 764.35521 0.35521304 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 5 0 1 37.782 37.782 2 0.030587 10087 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.813 2.1984 0 127.68 0 88.134 137.42 114.4 0 120 0 83 139 111 0 1 0 1 1 1 5194.2 3287 895 3192 7653 8797 8797 1 DLSSVQTLLTK Unmodified 1203.6711 0.67106787 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 75.292 75.292 2;3 9.1841E-26 22756 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 181.68 119.72 355.52 371.71 60.442 119.49 353.46 416.66 333 370 56 111 351 398 5 5 1 1 5 4 231880 3288 551 3193 7654;7655;7656;7657;7658 8798;8799;8800;8801;8802;8803;8804 8801 7 DLSTALPSGQVCHDQQR Unmodified 1910.8905 0.89047291 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 5.5 0.5 1 1 47.048 47.048 3 2.8612E-31 14567 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117 95.154 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 2401.6 3289 3193 3194 7659;7660 8805;8806 8805 2 DLSTIEPLKK Unmodified 1142.6547 0.65468953 720 D3YYE1;D3Z7M9;O35381;F6UFG6 Anp32a Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 1 8 0 1 59.174 59.174 3 0.021924 18271 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.597 21.099 109.04 80.96 0 0 0 148.17 102 83 0 0 0 139 1 1 0 0 0 1 5074.9 3290 720 3195 7661 8807 8807 1 DLTAVSNNAGVDNFGLGLLLR Deamidation (N) 2159.1222 0.12224699 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 1 0 0 7 0 1 96.041 96.041 3 1.175E-06 35358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.125 39.562 5.3091 0 9.3953 7.091 0 14.924 5 0 9 7 0 14 1 0 1 1 0 1 1639.7 3291 3028 3196 7662 8808 8808 1055 1 DLTAVSNNAGVDNFGLGLLLR Unmodified 2158.1382 0.1382314 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 9.75 1.92 1 2 1 92.643 92.643 2;3;4 1.7104E-17 36923 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.48 98.499 20.039 57.787 26.648 49.072 37.781 0 19 56 28 47 37 0 1 2 1 2 1 0 32494 3292 3028 3196 7663;7664;7665;7666 8809;8810;8811;8812 8812 4 DLTDYLMK Unmodified 997.47903 0.47903335 1673;1781;1791;2366 P60710;E9Q1F2;E9Q5F4;G3UZ07;P63260;P68033;P68134;P62737;P63268;D3YZY0;D3Z2K3;A0A0U1RQ96;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 7.43 3.33 1 1 1 2 1 1 73.548 73.548 2;3 0.00084854 25046 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 148.38 68.914 3424.5 2540 4576.8 3576.2 3665.4 4555.2 3221 2669 4534 3575 3801 4371 9 10 11 9 10 9 2010700 3293 1673;1781;1791;2366 3197 7667;7668;7669;7670;7671;7672;7673 8813;8814;8815;8816;8817;8818;8819;8820;8821;8822;8823 8819 11 DLTDYLMK Oxidation (M) 1013.4739 0.47394797 1673;1781;1791;2366 P60710;E9Q1F2;E9Q5F4;G3UZ07;P63260;P68033;P68134;P62737;P63268;D3YZY0;D3Z2K3;A0A0U1RQ96;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 1 0 7 0.632 1 3 1 69.932 69.932 3 0.0038983 22950 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.21 39.171 274.41 223.64 317.06 206.93 277.6 270.32 258 231 313 203 278 259 5 5 6 4 5 4 53918 3294 1673;1781;1791;2366 3197 7674;7675;7676;7677;7678 8824;8825;8826;8827;8828;8829;8830 8826 117 7 DLTEYLSR Unmodified 995.49238 0.49237523 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 6 0 1 61.558 61.558 2 0.022774 20868 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.605 38.312 68.698 62.472 122.96 62.529 63.129 57.895 65 65 120 65 65 56 1 1 1 1 1 1 10823 3295 668;3370 3198 7679 8831 8831 1 DLTGQVPTPPVK Unmodified 1250.6871 0.68705229 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8.67 3.09 1 1 1 59.946 59.946 3 0.00012028 20070 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.314 50.474 198 273.06 247.28 210.83 273.8 386.61 186 269 241 204 278 370 3 4 4 4 5 6 32652 3296 1382 3199 7680;7681;7682 8832;8833;8834;8835;8836;8837 8832 6 DLTGVQNLR Unmodified 1014.5458 0.54580778 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.33 3.4 1 1 1 50.184 50.184 2 0.00064765 16153 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.15 73.729 157.12 298.09 374.5 452.16 226.33 178.02 148 296 382 438 226 167 2 3 3 3 1 2 126890 3297 551 3200 7683;7684;7685 8838;8839;8840 8840 3 DLTLLITER Unmodified 1072.6128 0.61282471 2512 Q8CA71 Shisa4 Protein shisa-4 yes yes 0 0 0 0 7 0 1 73.243 73.243 2 0.0017672 25452 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.233 46.497 0 29.152 38.285 0 0 49.036 0 28 37 0 0 46 0 1 1 0 0 1 3828.9 3298 2512 3201 7686 8841 8841 1 DLTNPAGEEGDTSLR Unmodified 1573.722 0.72199382 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 2 0 1 50.521 50.521 2 0.0030783 16416 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.235 33.031 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 908.35 3299 2363 3202 7687 8842 8842 1 DLTNVQNLQK Unmodified 1171.6197 0.619701 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 0.816 1 1 1 55.203 55.203 2;3 2.1282E-08 16289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 145.84 99.866 178.55 156.07 0 188.63 198.8 232.05 167 158 0 176 204 223 2 3 0 2 2 3 34566 3300 551 3203 7688;7689;7690 8843;8844;8845 8845 3 DLTPEHLPLLR Unmodified 1302.7296 0.7295858 3103 Q9DAR7;Q3TBW9 Dcps m7GpppX diphosphatase yes no 0 0 0 0 6 0 1 62.265 62.265 3 0.044911 21202 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.875 14.02 29.799 27.484 17.881 19.701 0 39.442 28 28 19 19 0 37 1 1 1 1 0 1 2718.3 3301 3103 3204 7691 8846 8846 1 DLTQAPPPSGLQGLDDIGYIGYR Unmodified 2445.2176 0.21760393 574 B1AQY2;Q69ZH9;F8VQ11 Arhgap23 Rho GTPase-activating protein 23 yes no 0 0 0 0 6 0 1 81.486 81.486 3 0.019814 30193 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.976 16.034 0 20.073 8.5336 0 19.197 19.706 0 19 9 0 19 19 0 1 1 0 1 1 1666.3 3302 574 3205 7692 8847 8847 1 DLTQAWDLYYHVFR Unmodified 1825.8788 0.87876924 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 10 0 1 87.216 87.216 3 0.034605 28100 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.597 26.497 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 2694 3303 3243 3206 7693 8848 8848 1 DLTQLFGFAR Unmodified 1166.6084 0.60840804 3198 Q9ET22 Dpp7 Dipeptidyl peptidase 2 yes yes 0 0 0 0 11 0 1 85.231 85.231 2 0.0014209 26844 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.827 44.261 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 4828.8 3304 3198 3207 7694 8849 8849 1 DLTSVLILQR Unmodified 1156.6816 0.68157298 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0 1 74.303 74.303 2 0.0048417 24641 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.816 32.494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3305 893 3208 7695 8850 8850 1 DLTSVNILLK Unmodified 1114.6598 0.6597749 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 10.2 1.72 1 1 1 1 1 77.551 77.551 2;3 3.805E-15 26142 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 171.56 85.889 148.04 176.67 113.19 214.37 214.41 280.64 139 176 111 204 222 269 2 2 2 2 2 3 48927 3306 2186;2148 3209 7696;7697;7698;7699;7700 8851;8852;8853;8854;8855 8852 5 DLTSWVTEMK Unmodified 1208.5747 0.57472465 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 79.863 79.863 2 5.5889E-18 27943 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 179.8 104.12 157.19 154.84 455.6 136.23 224.09 328.33 148 157 436 139 231 314 2 3 4 2 3 3 50206 3307 551 3210 7701;7702;7703;7704 8856;8857;8858;8859 8857 4 DLTTFLYHLR Unmodified 1277.6768 0.67682195 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 11.5 1.12 1 1 1 1 74.719 74.719 3 5.8298E-16 22603 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 173.37 120.13 91.916 36.248 30.145 86.834 69.445 103.41 86 38 28 80 69 98 3 2 1 2 2 2 35416 3308 2727 3211 7705;7706;7707;7708 8860;8861;8862;8863 8860 4 DLTTSSVEK Unmodified 978.48696 0.4869555 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 5 0 1 47.22 47.22 2 9.1427E-05 14599 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.13 70.588 0 107.22 78.241 115.21 77.208 125.72 0 102 83 111 83 120 0 1 1 1 1 1 19369 3309 1382 3212 7709 8864 8864 1 DLVAIEAK Unmodified 857.48583 0.48583328 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 59.216 59.216 2;3 0.0013088 20548 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.01 54.276 546.44 542.4 801.72 690.19 570.69 615.31 515 557 802 685 587 587 2 3 3 3 2 2 64141 3310 2148 3213 7710;7711;7712 8865;8866;8867 8865 3 DLVDDLK Unmodified 816.4229 0.42289868 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 5 0 1 62.781 62.781 2 0.03134 22071 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.212 20.174 108.8 60.881 56.391 0 103.76 85.517 102 65 56 0 102 83 1 1 1 0 1 1 7121.9 3311 1577 3214 7713 8868 8868 1 DLVDDVFTVTEDEIK Unmodified 1736.8356 0.8356266 3297 Q9QZX7 Srr Serine racemase yes yes 0 0 0 0 4 0.816 1 1 1 93.294 93.294 3 1.6204E-36 34152 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 175.29 146.32 0 28.728 0 21.096 24.153 29.895 0 27 0 21 24 29 0 2 0 2 2 3 9482 3312 3297 3215 7714;7715;7716 8869;8870;8871;8872 8870 4 DLVILLYETALLSSGFSLEDPQTHANR Unmodified 3001.5397 0.53966635 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10.5 0.5 1 1 110.98 110.98 4 3.7458E-12 34211 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.832 54.645 0 5.275 2.6932 5.3045 0 0 0 5 3 5 0 0 0 1 1 1 0 0 6911.4 3313 1322 3216 7717;7718 8873;8874 8873 2 DLVPDLSNFYAQYK Unmodified 1671.8144 0.81443765 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 8.8 2.23 2 1 1 1 85.134 85.134 2;3 2.3916E-11 31131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.14 91.33 158.8 149.48 100.05 106.7 166.17 135.51 149 149 102 103 168 130 5 4 2 2 5 3 37336 3314 2918 3217 7719;7720;7721;7722;7723 8875;8876;8877;8878;8879;8880 8876 6 DLVPHYYVESIADLMEGLED Unmodified 2307.0617 0.061680143 1670 P60487;A0A2R8W6I7 Pdxp Pyridoxal phosphate phosphatase yes no 0 0 0 0 6 0 1 105.96 105.96 3 5.5084E-06 37844 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.434 49.776 2.1332 0 2.1532 0 3.138 0 2 0 2 0 3 0 1 0 1 0 1 0 1259 3315 1670 3218 7724 8881 8881 1 DLVQDPSLLGGTISAYK Unmodified 1775.9305 0.93053004 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 6 0 1 78.919 78.919 3 9.6732E-07 28953 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.713 44.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3316 416 3219 7725 8882 8882 1 DLVSSLTSGLLTIGDR Unmodified 1645.8887 0.88866522 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 10.8 1.48 1 1 1 1 94.359 94.359 2;3 4.4902E-17 33686 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.5 81.687 39.273 34.898 31.965 95.88 0 59.696 38 33 33 89 0 56 2 2 3 3 0 2 18244 3317 2020 3220 7726;7727;7728;7729 8883;8884;8885;8886;8887 8883 5 DLVTYFLNLR Unmodified 1252.6816 0.68157298 1651 P58242 Smpdl3b Acid sphingomyelinase-like phosphodiesterase 3b yes yes 0 0 0 0 12 0 1 94.231 94.231 2 0.00013787 27060 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.65 70.224 14.813 0 35.058 12.863 18.606 19.723 14 0 33 14 19 19 1 0 1 1 1 1 1464.8 3318 1651 3221 7730 8888 8888 1 DLVVLLFETALLSSGFSLEDPQTHSNR Unmodified 2987.524 0.52401629 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 11.5 0.5 1 1 117.33 117.33 4 1.9259E-12 37066 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.152 57.735 0 0 5.41 0 5 9.594 0 0 5 0 5 9 0 0 1 0 1 1 4789.8 3319 1354 3222 7731;7732 8889;8890;8891 8890 3 DLWPMVSPEDTQSLSFSEESPSK Unmodified 2595.1687 0.16866441 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 6 0 1 84.992 84.992 4 0.00022543 31701 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.497 30.042 20.346 8.2041 0 9.4841 18.761 19.719 19 9 0 9 19 19 1 1 0 1 1 1 831.01 3320 510 3223 7733 8892 8892 1 DLYAFYPLLIR Unmodified 1382.7598 0.7598233 902 F6U7V1;E9Q401;A0A1Y7VK09 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 10.5 0.5 1 1 91.29 91.29 2 4.8876E-05 29700 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.653 62.541 12.876 0 0 13.116 0 0 12 0 0 12 0 0 1 0 0 1 0 0 4117.1 3321 902 3224 7734;7735 8893;8894 8893 2 DLYANNVLSGGTTMYPGIADR Unmodified 2227.0579 0.057932169 1791 P68033;P62737;P63268 Actc1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 0 0 7 0 1 74.417 74.417 3 5.4472E-05 25958 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.539 30.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3322 1791 3225 7736 8895 8895 1 DLYANTVLSGGTTMYPGIADR Unmodified 2214.0627 0.062683196 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 8 3.42 2 4 3 3 1 1 1 1 3 79.599 79.599 2;3;4 7.6532E-30 26770 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.29 87.326 424.67 439.5 856.71 671.76 674.21 780.38 401 429 828 650 678 744 11 10 18 18 14 19 761970 3323 1673;1781 3226 7737;7738;7739;7740;7741;7742;7743;7744;7745;7746;7747;7748;7749;7750;7751;7752;7753;7754;7755 8896;8897;8898;8899;8900;8901;8902;8903;8904;8905;8906;8907;8908;8909;8910;8911;8912;8913;8914;8915;8916;8917;8918;8919;8920;8921;8922;8923;8924;8925;8926;8927;8928;8929;8930 8906 35 DLYANTVLSGGTTMYPGIADR Deamidation (N) 2215.0467 0.046698781 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 0 5 0 2 76.118 76.118 2;3 0.0013384 28295 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.178 30.236 19.17 28.499 28 20.411 18.936 0 18 28 28 19 19 0 1 1 1 1 1 0 14565 3324 1673;1781 3226 7756;7757 8931;8932 8931 642 2 DLYANTVLSGGTTMYPGIADR Oxidation (M) 2230.0576 0.057597819 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 0 6.75 0.433 1 3 72.905 72.905 3 1.0015E-08 24368 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.1 62.79 74.512 55.033 53.949 99.483 68.019 28.862 70 56 56 93 69 28 3 2 2 2 2 1 33676 3325 1673;1781 3226 7758;7759;7760;7761 8933;8934;8935;8936 8934 118 4 DLYEDELVPLFEK Unmodified 1608.7923 0.79230522 2719 Q8VHM5;A2AW41;F7B5B5 Hnrnpr yes no 0 0 0 0 7 3.54 1 1 1 1 88.166 88.166 3 9.5755E-05 34741 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.506 61.627 6.2873 101.14 34.449 68.379 113.8 87.21 6 96 34 65 114 84 1 4 2 2 3 2 13004 3326 2719 3227 7762;7763;7764;7765 8937;8938;8939;8940 8940 4 DLYGDFK Unmodified 856.39668 0.39668393 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 0 6 0 1 60.47 60.47 2 0.059108 20296 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.127 30.881 200.95 131.02 199.25 137.2 151.63 244.05 189 139 198 139 159 233 1 1 1 1 1 1 16984 3327 1526 3228 7766 8941 8941 1 DLYQMSDSQLYEAFTFLK Unmodified 2198.0242 0.024172425 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 9.25 2.28 2 2 2 2 98.981 98.981 3;4 2.5024E-15 36222 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.654 57.348 96.158 158 82.647 89.9 86.856 171.28 90 151 79 84 86 163 4 5 4 3 3 6 26931 3328 1850;2212 3229 7767;7768;7769;7770;7771;7772;7773;7774 8942;8943;8944;8945;8946;8947;8948;8949;8950;8951 8943 10 DMAAFNERPIIFALSNPTSK Unmodified 2221.1201 0.1201385 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 1 8 0 1 78.195 78.195 4 2.9885E-08 27196 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.783 49.984 48.869 29.801 56.907 37.049 0 0 46 32 56 37 0 0 1 1 1 1 0 0 3505.7 3329 1317 3230 7775 8952 8952 1 DMANPTALLLSAVMMLR Oxidation (M) 1861.9464 0.94639657 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 1 0 11.5 0.5 1 1 108.55 108.55 3 0.0010076 35501 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.785 39.87 0 7.448 0 17.122 19.452 19.838 0 7 0 16 20 19 0 1 0 2 2 1 2894.2 3330 307 3231 7776;7777 8953;8954 8953 19 2 DMANPTALLLSAVMMLR Unmodified 1845.9515 0.95148195 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 12.5 0.5 1 1 114.3 114.3 3 2.9341E-46 44846 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 171.78 127.09 16.052 14.878 0 11.699 23.27 7.2901 15 15 0 11 23 7 1 2 0 1 2 1 11001 3331 307 3231 7778;7779 8955;8956 8956 2 DMANQVK Unmodified 804.37999 0.379988 2868 Q99LX0 Park7 Protein deglycase DJ-1 yes yes 0 0 0 0 6 0 1 40.164 40.164 2 0.027191 10759 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.9 43.396 138.26 76.623 141.54 79.907 126.32 174.42 130 83 139 83 130 167 1 1 1 1 1 1 8178.2 3332 2868 3232 7780 8957 8957 1 DMDDEESWIK Oxidation (M) 1282.5023 0.50234756 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 1 0 3 0 1 58.725 58.725 3 0.015716 20711 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.548 41.404 20.244 28.427 0 50.278 0 39.442 19 28 0 46 0 37 1 1 0 1 0 1 4511.6 3333 551 3233 7781 8958 8958 25 1 DMDDEESWIK Unmodified 1266.5074 0.50743294 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.75 4.21 2 1 1 64.908 64.908 2;3 2.9423E-11 23488 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 163.16 132.91 256.98 111.17 176.39 210.53 140.03 232.66 241 112 167 203 148 222 4 2 2 3 2 3 47902 3334 551 3233 7782;7783;7784;7785 8959;8960;8961;8962 8959 4 DMGGYSTTTDFIK Unmodified 1434.6337 0.63369609 2734 Q91VA7;V9GXV0 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes no 0 0 0 0 7.5 3.2 1 2 1 64.988 64.988 2;3 8.2808E-05 23049 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.494 61.113 348.49 188.25 98.528 98.549 180.15 396.74 326 194 93 93 185 377 3 2 2 2 2 3 31190 3335 2734 3234 7786;7787;7788;7789 8963;8964;8965;8966 8963 4 DMIDLEANFEK Unmodified 1323.6017 0.60166768 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 7 3.54 1 1 1 1 74.764 74.764 3 0.00051799 28197 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.342 43.454 109.03 61.507 56.384 115 157.77 114.89 102 65 56 111 157 111 2 2 2 3 2 2 28551 3336 1151 3235 7790;7791;7792;7793 8967;8968;8969;8970 8970 4 DMILQFISR Unmodified 1121.5903 0.59031513 1082 Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm2 Dynamin-2 yes no 0 0 0 0 10 0 1 80.741 80.741 2 0.038572 25373 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.37 32.749 39.701 0 0 39.747 36.876 0 37 0 0 37 37 0 1 0 0 1 1 0 2554.5 3337 1082 3236 7794 8971 8971 1 DMLCITEETFGPLAPVIK Unmodified 2033.0213 0.021335654 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 8.75 2.49 2 1 1 95.558 95.558 3;4 3.3685E-05 35224 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.477 46.645 19.192 49.207 68.412 0 23.569 14.251 18 47 66 0 23 14 2 2 3 0 1 1 7802.9 3338 2469 3237 7795;7796;7797;7798 8972;8973;8974;8975 8973 4 DMLMQFVTK Unmodified 1111.5406 0.54058775 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 10.2 1.64 2 1 1 78.364 78.364 2;3 0.0012563 29945 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.22 70.346 187.44 169.6 341.53 196.11 163.76 281.02 176 167 334 195 167 268 2 3 4 3 2 3 76030 3339 118;1534 3238 7799;7800;7801;7802 8976;8977;8978;8979 8979 4 DMLYQVLAAEEPSVR Unmodified 1719.8502 0.85017123 2766 Q91XH5;G3UXX3;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 8.67 3.09 1 1 1 81.297 81.297 3 2.9533E-05 30116 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.296 56.946 69.394 0 79.487 29.466 56.553 58.918 65 0 75 28 56 56 2 0 3 1 2 1 14830 3340 2766 3239 7803;7804;7805 8980;8981;8982 8980 3 DMPIQAFLLYQEPVLGPVR Oxidation (M) 2201.1555 0.15546137 654 CON__P02666 yes yes 0 0 1 0 7 0 1 89.532 89.532 3 0.0021506 33039 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.494 25.401 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1626.1 + 3341 654 3240 7806 8983 8983 32 1 DMPIQAFLLYQEPVLGPVR Unmodified 2185.1605 0.16054675 654 CON__P02666 yes yes 0 0 0 0 8 0 1 95.738 95.738 3 5.2034E-06 34574 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.564 50.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3342 654 3240 7807 8984 8984 1 DMTLEGDDLILEIE Unmodified 1604.7491 0.74911978 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 3 0 1 98.423 98.423 2 2.1947E-07 32477 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.817 68.146 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3343 974 3241 7808 8985 8985 1 DMTSEELDDILR Unmodified 1435.6501 0.65007443 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 4.8 4.17 2 1 1 1 73.179 73.179 2;3 1.3306E-26 27372 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 174.4 123.12 168.52 93.905 281.17 128.49 157.68 153.27 158 90 267 124 157 148 3 4 5 4 2 3 53659 3344 2699 3242 7809;7810;7811;7812;7813 8986;8987;8988;8989;8990;8991;8992;8993 8989 8 DMTSEQLDEILR Unmodified 1448.6817 0.68170891 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 4 0.816 1 1 1 70.5 70.5 2;3 1.82E-05 25513 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.191 71.96 20.184 18.546 18.467 38.666 0 0 19 19 19 38 0 0 1 1 1 2 0 0 11982 3345 2253 3243 7814;7815;7816 8994;8995;8996 8995 3 DMTSEQLDEILRDHTEIVFAR Unmodified 2517.217 0.21695201 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 5.5 0.5 1 1 77.196 77.196 4 1.2589E-30 28197 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.43 131.13 29.526 37.518 85.507 66.926 44.06 48.845 28 38 84 65 46 47 1 1 2 1 1 2 11819 3346 2253 3244 7817;7818 8997;8998 8998 2 DMTTGIVENK Unmodified 1106.5278 0.52777445 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 6 0 1 53.276 53.276 2 0.0017492 16929 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.948 41.205 29.804 27.498 17.032 38.75 35.932 28.823 28 28 19 37 37 28 1 1 1 1 1 1 2016.6 3347 1255 3245 7819 8999 8999 1 DNAELENLIR Unmodified 1185.599 0.59896556 664;663 CON__Q9UE12;CON__Q15323;CON__Q14525 no no 0 0 0 0 6.67 4.5 1 1 1 62.97 62.97 2 5.4734E-07 22306 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.28 81.405 29.799 27.483 17.92 18.841 45.632 253.58 28 28 19 19 47 250 1 1 1 1 1 2 13242 + 3348 664;663 3246 7820;7821;7822 9000;9001;9002 9001 3 DNAGAATEEFIK Unmodified 1264.5935 0.59354583 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 5.67 3.45 2 1 1 1 1 56.925 56.925 2;3 3.4418E-18 19832 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 150.14 105.16 356.12 250.77 343.62 346.01 356.27 292.83 334 254 342 338 361 282 5 5 5 6 5 5 245100 3349 1308 3247 7823;7824;7825;7826;7827;7828 9003;9004;9005;9006;9007;9008;9009 9003 7 DNAGAATEEFIKR Unmodified 1420.6947 0.69465686 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 1 4.5 0.5 1 1 49.73 49.73 3 1.5281E-15 15890 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.73 109.26 320.2 304.95 388.36 283.45 375.26 359.19 302 313 389 278 383 347 2 2 2 1 2 2 57095 3350 1308 3248 7829;7830 9010;9011 9011 2 DNALCENAR Unmodified 1061.456 0.45600649 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0;A0A0G2JEY8 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 33.446 33.446 2 0.0035303 9024 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.142 62.813 212.02 99.04 222.93 133.2 107.8 254.67 199 102 218 130 111 241 3 2 4 2 2 3 28352 3351 3210 3249 7831;7832;7833;7834 9012;9013;9014;9015 9013 4 DNALLAQLIQDK Unmodified 1340.73 0.72997974 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 81.392 81.392 3 2.6722E-14 31420 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.48 81.751 483.32 214.06 541.45 378.89 464.96 523.29 454 219 530 374 471 503 6 3 6 3 5 5 200010 3352 1160 3250 7835;7836;7837;7838;7839 9016;9017;9018;9019;9020;9021;9022;9023 9023 8 DNALLAQLIQDKLDAYK Unmodified 1931.0364 0.036392091 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 10 0.816 1 1 1 90.893 90.893 3;4 3.5479E-08 29109 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.66 86.492 59.711 74.71 90.329 85.418 53.729 112.53 56 74 87 84 56 107 1 1 2 2 1 2 31001 3353 1160 3251 7840;7841;7842 9024;9025;9026 9026 3 DNCGEGVQTR Unmodified 1134.4724 0.47238484 835 E9PWD2;E9QNR5;Q69ZU6 Thsd7a Thrombospondin type-1 domain-containing protein 7A yes no 0 0 0 0 1 0 1 26.042 26.042 2 0.00013762 4914 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.66 59.788 29.952 18.196 0 0 0 9.594 28 19 0 0 0 9 1 1 0 0 0 1 2725 3354 835 3252 7843 9027 9027 1 DNDFLNEGQK Unmodified 1178.5204 0.52038089 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 3.5 0.5 2 2 51.85 51.85 2 0.00060722 16524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.483 0 69.227 66.027 96.185 47.109 65.875 68.483 65 66 92 46 66 65 3 3 2 1 3 2 10077 3355 2334 3253 7844;7845;7846;7847 9028;9029;9030;9031 9030 4 DNFAQDLGTLR Unmodified 1248.6099 0.6098646 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 7 3.54 1 1 1 1 62.897 62.897 2;3 0.00021531 22157 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.803 47.816 196.82 134.65 194.43 208.19 207.22 496.27 185 139 195 204 222 474 2 2 2 2 3 4 53690 3356 1304 3254 7848;7849;7850;7851 9032;9033;9034;9035;9036 9034 5 DNFFIELGQPQWLK Unmodified 1733.8777 0.8777066 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 7.5 0.5 1 1 91.419 91.419 3 4.3846E-05 33149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.146 56.483 29.689 41.52 69.757 50.737 45.112 19.604 28 42 69 51 46 19 1 2 2 2 2 1 6652.5 3357 2619 3255 7852;7853 9037;9038;9039 9038 3 DNFTAIPEGTNGVEER Unmodified 1747.8013 0.80130678 836 Q3TT92;E9PWE8;Q62188;D3YUS0 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 2.5 0.5 1 1 56.075 56.075 3 7.03E-06 19498 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.795 58.656 29.679 56.487 65.523 28.471 64.366 67.453 28 56 65 28 65 65 1 2 2 1 2 2 7338.7 3358 836 3256 7854;7855 9040;9041 9041 2 DNFTAIPEGTNGVEER Deamidation (N) 1748.7853 0.78532236 836 Q3TT92;E9PWE8;Q62188;D3YUS0 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 0 2.33 0.471 2 1 58.465 58.465 3 2.5041E-05 20261 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.911 56.853 69.078 121.94 103.91 36.779 153.01 116.73 65 120 102 37 150 111 3 4 3 2 3 2 34299 3359 836 3256 7856;7857;7858 9042;9043;9044;9045;9046 9045 216 5 DNFTLIPEGTNGTEER Deamidation (N) 1792.8115 0.81153711 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 0 5.47 3.93 3 3 3 2 1 3 66.491 66.491 2;3 7.5422E-50 24482 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 186.94 156.39 349.23 301.95 266.48 499.41 582.37 499.29 327 297 260 475 586 483 11 9 7 14 16 14 633840 3360 1158 3257 7859;7860;7861;7862;7863;7864;7865;7866;7867;7868;7869;7870;7871;7872;7873 9047;9048;9049;9050;9051;9052;9053;9054;9055;9056;9057;9058;9059;9060;9061;9062;9063;9064;9065;9066;9067;9068 9057 309;310 22 DNFTLIPEGTNGTEER 2 Deamidation (N) 1793.7956 0.7955527 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 2 0 0 2 0 2 68.747 68.747 3 0.00066099 25180 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.428 58.205 0 9.4296 8.7573 9.3151 28 9.594 0 9 9 9 28 9 0 1 1 1 1 1 6591.4 3361 1158 3257 7874;7875 9069;9070 9070 309;310 2 DNFTLIPEGTNGTEER Unmodified 1791.8275 0.82752153 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 4 0.707 1 2 1 63.405 63.405 2;3 2.2005E-16 22407 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.84 84.44 59.74 106.73 26.662 129.68 52.199 208.53 56 102 28 121 56 199 2 3 1 4 2 5 84875 3362 1158 3257 7876;7877;7878;7879 9071;9072;9073;9074;9075;9076 9074 6 DNFTLIPEGVNGIEER Deamidation (N) 1802.8687 0.86865806 2212;1850;207 P97427;Q6P1J1;Q3TMU8;A0A0R4J1N0;O35098 Crmp1;Dpysl4 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 4 no no 0 1 0 0 4.55 2.81 1 3 4 2 1 75.665 75.665 2;3 1.0563E-05 28331 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.013 49.685 169.52 116.57 206.42 122.81 232.73 217.86 159 117 198 119 229 208 4 7 6 5 8 9 127550 3363 1850;2212;207 3258 7880;7881;7882;7883;7884;7885;7886;7887;7888;7889;7890 9077;9078;9079;9080;9081;9082;9083;9084;9085;9086;9087;9088;9089;9090 9079 72 14 DNFTLIPEGVNGIEER Unmodified 1801.8846 0.88464248 2212;1850;207 P97427;Q6P1J1;Q3TMU8;A0A0R4J1N0;O35098 Crmp1;Dpysl4 Dihydropyrimidinase-related protein 1;Dihydropyrimidinase-related protein 4 no no 0 0 0 0 6.25 3.96 1 1 1 1 73.948 73.948 3 9.3549E-06 27122 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.376 40.416 99.342 103.24 75.873 87.885 113.11 0 93 102 75 84 112 0 2 2 3 2 3 0 44004 3364 1850;2212;207 3258 7891;7892;7893;7894 9091;9092;9093;9094 9092 4 DNGKHALIIYDDLSK Deamidation (N) 1701.8574 0.85736509 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 1 5 0 1 66.722 66.722 4 0.0055288 23771 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.888 32.134 29.635 27.026 45.913 46.873 35.559 28.833 28 28 46 46 37 28 1 1 1 1 1 1 2521.1 3365 1881 3259 7895 9095 9095 766 1 DNHLAIER Unmodified 966.48829 0.4882929 526 A2AUK5;A2AUK8;Q9Z2H5 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 3.5 0.5 1 1 33.542 33.542 3 0.018133 9002 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.549 36.767 29.742 27.324 46.932 47.871 37.381 0 28 28 47 47 37 0 1 1 2 2 1 0 17366 3366 526 3260 7896;7897 9096;9097 9096 2 DNIISDYDQIIDYVER Unmodified 1969.9269 0.92690122 426 A2A5H8;Q3USC7;Q8VE33 Gdap1l1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 0 4 0.816 1 1 1 92.526 92.526 3 1.2332E-07 32120 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.98 93.291 21.399 8.9558 2.7237 3.1167 15.156 19.822 20 9 3 3 15 19 3 2 1 1 2 3 6658.3 3367 426 3261 7898;7899;7900 9098;9099;9100;9101 9098 4 DNILIECEAK Unmodified 1203.5805 0.58053831 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 6 3.58 1 1 2 1 58.683 58.683 2;3 4.5542E-05 20185 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.4 56.428 197.77 111.49 28.305 177.25 220.16 113.93 185 111 28 167 222 111 4 2 1 3 4 2 26856 3368 20;2354 3262 7901;7902;7903;7904;7905 9102;9103;9104;9105;9106 9105 5 DNIQGITK Unmodified 887.47125 0.47124585 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 8 3.56 1 1 1 47.838 47.838 2 0.0068057 14476 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.21 62.81 305.93 176.51 190.89 239.43 310.82 192.82 287 176 185 231 314 186 3 2 2 2 3 2 29686 3369 1739 3263 7906;7907;7908 9107;9108;9109 9108 3 DNIQGITKPAIR Unmodified 1324.7463 0.7462985 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 1 9.33 2.75 1 1 1 1 2 50.306 50.306 3;4 5.7366E-15 14196 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.01 115.16 913.77 875.48 737.99 890.99 597.86 782.44 858 886 749 863 626 750 6 6 4 5 6 6 321830 3370 1739 3264 7909;7910;7911;7912;7913;7914 9110;9111;9112;9113;9114;9115;9116 9113 7 DNLIVPILEEEVQNSVSGESEA Unmodified 2370.1438 0.14382987 798 E0CXA9;Q6PEB6;G8JL35 Mob4 MOB-like protein phocein yes no 0 0 0 0 4 0.816 1 1 1 102.02 102.02 3 3.9519E-06 32715 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.509 38.917 6.3859 2.9261 6.2842 0 3.138 1.066 6 3 6 0 3 1 4 2 4 0 2 1 7798.3 3371 798 3265 7915;7916;7917 9117;9118;9119;9120;9121 9118 5 DNLSYIEHIFEISR Unmodified 1734.8577 0.85769944 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 0 6.5 0.5 1 1 82.876 82.876 3 0.00010914 30855 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.754 64.63 48.886 85.115 57.732 80.109 41.072 97.966 46 84 55 74 46 93 1 2 1 1 1 1 11042 3372 2143 3266 7918;7919 9122;9123 9122 2 DNLTLWTSDMQGDGEEQNK Unmodified 2179.9328 0.93279124 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 0 5.5 0.5 1 1 70.986 70.986 3 4.1984E-08 25799 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.92 84.796 29.6 46.356 35.396 38.331 0 0 28 46 37 37 0 0 1 1 1 1 0 0 6585.6 3373 1715 3267 7920;7921 9124;9125 9124 2 DNLTLWTSDMQGDGEEQNKEALQDVEDENQ Oxidation (M);Deamidation (N) 3467.4431 0.44306095 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 1 1 1 3 0 1 78.952 78.952 4 5.6258E-05 29803 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.612 36.952 9.6335 4.6704 0 5.465 0 6.396 9 5 0 5 0 6 1 1 0 1 0 1 3574.2 3374 1715 3268 7922 9126 9126 666 128 1 DNLTLWTSDMQGDGEEQNKEALQDVEDENQ Unmodified 3450.4641 0.46413074 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 1 5.75 4.21 2 1 1 79.233 79.233 4 0.0012628 30282 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.054 31.108 69.111 99.074 81.156 36.887 104.89 88.491 65 98 79 38 102 84 2 3 4 2 3 3 67373 3375 1715 3268 7923;7924;7925;7926 9127;9128;9129;9130;9131 9129 5 DNLTLWTSDQQDDDGGEGNN Unmodified 2192.873 0.87302775 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 4.38 3.39 2 3 1 1 1 74.554 74.554 2;3 1.1145E-10 27258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.622 82.458 148.72 83.192 55.184 127.82 193.11 184.62 139 84 56 121 195 178 3 3 3 4 5 6 185940 3376 1706 3269 7927;7928;7929;7930;7931;7932;7933;7934 9132;9133;9134;9135;9136;9137;9138;9139;9140 9137 9 DNLTLWTSDQQDDDGGEGNN Deamidation (N) 2193.857 0.85704333 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 0 0 2 0 1 75.247 75.247 3 0.002076 27151 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.916 41.206 0 6.2818 6.1151 0 0 0 0 6 6 0 0 0 0 1 1 0 0 0 1700.5 3377 1706 3269 7935 9141 9141 660;661 1 DNLTLWTSDQQDEEAGEGN Unmodified 2120.8771 0.8770505 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 74.479 74.479 3 1.0132E-07 27323 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.51 70.815 133.84 286.55 196.86 97.183 197.02 153.74 127 280 195 93 195 149 6 8 5 4 4 3 112530 3378 1797 3270 7936;7937;7938;7939;7940 9142;9143;9144;9145;9146;9147;9148;9149;9150;9151 9146 10 DNLTLWTSDSAGEECDAAEGAEN Unmodified 2453.9765 0.97650654 1005 F6VW30;P68254 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 5.5 4.39 1 1 1 1 76.105 76.105 3 7.8767E-05 28995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.638 46.363 98.861 53.763 0 81.153 62.56 116.78 93 55 0 75 65 111 5 2 0 3 3 3 58557 3379 1005 3271 7941;7942;7943;7944 9152;9153;9154;9155;9156;9157;9158 9158 7 DNLTLWTSDTQGDEAEAGEGGEN Unmodified 2407.9888 0.98878579 1773 P63101 Ywhaz 14-3-3 protein zeta/delta yes yes 0 0 0 0 4.33 3.16 1 5 1 1 1 75.871 75.871 3;4 2.8396E-15 27186 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.573 70.112 318.36 241.96 249.47 306.46 222.07 485.66 298 241 246 297 224 460 10 11 7 12 8 13 476590 3380 1773 3272 7945;7946;7947;7948;7949;7950;7951;7952;7953 9159;9160;9161;9162;9163;9164;9165;9166;9167;9168;9169;9170;9171;9172;9173;9174;9175;9176;9177;9178;9179;9180 9160 22 DNLTLWTSDTQGDEAEAGEGGEN Deamidation (N) 2408.9728 0.97280137 1773 P63101 Ywhaz 14-3-3 protein zeta/delta yes yes 0 1 0 0 2 0 2 80.267 80.267 3 5.8797E-07 27882 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.8 46.339 3.219 5.2023 7.0429 11.474 6.8466 7.2666 3 5 7 11 7 7 1 1 1 2 1 1 7010.3 3381 1773 3272 7954;7955 9181;9182 9181 703 2 DNLTLWTSENQGDEGDAGEGEN Unmodified 2349.9469 0.94692097 2944 Q9CQV8 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 0 4.8 4.17 2 1 1 1 73.761 73.761 3 2.2008E-15 27782 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.156 78.661 20.141 115.34 182.45 163.33 35.766 172.14 19 112 181 160 38 163 1 4 6 7 2 7 166870 3382 2944 3273 7956;7957;7958;7959;7960 9183;9184;9185;9186;9187;9188;9189;9190 9190 8 DNLTLWTSENQGDEGDAGEGEN Deamidation (N) 2350.9309 0.93093656 2944 Q9CQV8 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 1 0 0 2.5 0.5 1 1 75.318 75.318 3 2.077E-15 28374 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.276 87.556 9.5851 17.442 0 3.1637 31.005 0 9 17 0 3 30 0 1 2 0 1 3 0 7018.1 3383 2944 3273 7961;7962 9191;9192;9193 9193 1029 3 DNMFSGSK Unmodified 884.36982 0.36981725 1316 P06745;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 9.5 3.5 1 1 48.849 48.849 2 0.012259 15570 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.108 49.121 352.71 108.48 139.81 281.64 157.01 419.79 330 111 139 268 158 398 2 1 1 2 1 2 34178 3384 1316 3274 7963;7964 9194;9195 9195 2 DNNLELVQEILR Deamidation (N) 1455.7569 0.75692277 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 1 0 0 5 0 1 81.924 81.924 2 0.0025834 31083 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.332 45.719 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3385 3341 3275 7965 9196 9196 1132 1 DNNLELVQEILR Unmodified 1454.7729 0.77290718 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 6 0 1 81.771 81.771 2 0.037837 30315 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.423 19.169 20.207 0 30.194 0 18.867 29.31 19 0 28 0 19 28 1 0 1 0 1 1 1818.4 3386 3341 3275 7966 9197 9197 1 DNNLLGK Unmodified 772.40792 0.40791731 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 0 7.8 2.79 1 1 1 1 1 50.405 50.405 2;3 0.008866 15697 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.5 6.4451 864.68 936.58 1514.2 986.46 1482.4 1476.7 817 947 1496 996 1509 1425 5 5 6 5 6 6 314590 3387 1397;1762 3276 7967;7968;7969;7970;7971 9198;9199;9200;9201;9202;9203 9199 6 DNNPVVMLENELMYGVAFELPAEAQSK Unmodified 3007.4307 0.43070953 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 13 0 1 111.38 111.38 4 6.9561E-08 44441 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.854 44.177 7.511 0 0 0 7.322 0 7 0 0 0 7 0 1 0 0 0 1 0 1091.5 3388 3016 3277 7972 9204 9204 1 DNPGVVTCLDEAR Unmodified 1444.6616 0.66164217 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 52.335 52.335 2;3 6.3799E-142 17124 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 223.21 188.48 20.244 28.427 0 120.65 94.096 39.442 19 28 0 112 93 37 1 1 0 3 1 1 63212 3389 1876 3278 7973;7974;7975;7976 9205;9206;9207;9208 9208 4 DNPIEDELVFR Unmodified 1345.6514 0.65139506 689 Q3TDT0;D3YUY7;Q9R1R2 Trim3 Tripartite motif-containing protein 3 yes no 0 0 0 0 4 0 1 72.384 72.384 2 0.0020921 26443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.672 42.542 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3390 689 3279 7977 9209 9209 1 DNPLNEGTDAAR Deamidation (N) 1272.5582 0.55822296 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 0 1 0 0 1 0 1 41.462 41.462 2 1.3198E-13 11772 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.14 104.99 0 0 0 9.2942 28.861 0 0 0 0 9 28 0 0 0 0 1 1 0 3070.7 3391 1235 3280 7978 9210 9210 337 1 DNPLNEGTDAAR Unmodified 1271.5742 0.57420737 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 0 0 0 0 6 4.97 1 1 1 41.565 41.565 2 2.1368E-14 12581 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 135.6 100.09 223.51 177.34 155.98 55.223 251.46 96.632 210 182 153 56 246 93 6 5 3 2 5 2 66136 3392 1235 3280 7979;7980;7981 9211;9212;9213;9214;9215;9216 9211 6 DNPQGTSQVPADLR Unmodified 1496.7219 0.72193424 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 3 0 1 44.127 44.127 2 1.6757E-10 13898 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.926 61.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3393 1036 3281 7982 9217 9217 1 DNSDFDLLTVSETANEPPQDEGNSFNSPR Unmodified 3194.3912 0.3912238 1245 O70194 Eif3d Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 0 2.5 0.5 1 1 75.66 75.66 4 3.3544E-08 27237 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.428 50.643 20.346 10.209 7.3759 1.7464 0 0 19 11 7 2 0 0 1 2 1 1 0 0 2564 3394 1245 3282 7983;7984 9218;9219 9218 2 DNSGSHGSPISGK Unmodified 1241.5636 0.56364269 2386 Q8BGT8;F7D3N3;F6U6Z2 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 5 0 1 32.97 32.97 3 7.021E-05 7764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.09 68.047 0 0 58.947 36.928 0 88.478 0 0 56 37 0 83 0 0 1 1 0 1 6342.8 3395 2386 3283 7985 9220 9220 1 DNSIQHEFSLTR Unmodified 1445.6899 0.68990583 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 0 0 0 4.6 1.02 1 1 2 1 50.556 50.556 2;3 1.1499E-14 16506 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 134.04 105.14 20.121 135.13 207.18 180.61 157.45 85.089 19 130 204 177 157 83 1 3 3 3 3 2 79254 3396 309 3284 7986;7987;7988;7989;7990 9221;9222;9223;9224;9225 9222 5 DNTIEHLLPLFLAQLK Unmodified 1864.0458 0.045834566 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 10.5 0.5 2 2 98.079 98.079 3;4 1.1394E-05 32159 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.632 63.536 14 20.216 0 0 28.291 69.549 14 19 0 0 28 66 1 1 0 0 1 2 18133 3397 2272 3285 7991;7992;7993;7994 9226;9227;9228;9229;9230 9228 5 DNTIEHLLPLFLAQLKDECPEVR Unmodified 2749.4109 0.41090079 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 1 8.25 0.829 1 1 2 93.399 93.399 4;5 1.2725E-15 33910 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.168 76.203 76.652 29.792 28.778 29.589 124.55 38.168 74 28 28 28 121 38 2 1 2 1 3 2 11510 3398 2272 3286 7995;7996;7997;7998 9231;9232;9233;9234;9235 9232 5 DNTINLIHTFR Unmodified 1342.6993 0.69934831 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 8.5 2.69 1 1 1 1 57.58 57.58 3 0.00066092 19015 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.558 42.601 217.6 191.47 79.984 215.87 289.05 104.57 204 195 83 205 287 102 3 4 1 3 3 1 87395 3399 2971 3287 7999;8000;8001;8002 9236;9237;9238;9239 9236 4 DNVAGVTLPVFEHYHEGTDSYELTGLAR Unmodified 3089.473 0.47304335 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 5 0 1 73.466 73.466 4 0.044453 27093 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 23.951 11.755 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 8024.3 3400 1648 3288 8003 9240 9240 1 DNVEGFNCER Unmodified 1238.4986 0.49859959 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 2 0 1 41.709 41.709 2 0.058197 12646 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.805 34.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3401 1035 3289 8004 9241 9241 1 DNWEELHNR Unmodified 1211.5319 0.53194863 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 4 0.816 1 1 1 39.063 39.063 3 0.00041982 11706 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.342 66.532 79.836 78.045 91.675 66.348 66.411 106.84 75 75 88 65 69 102 2 2 2 2 2 2 18705 3402 1899 3290 8005;8006;8007 9242;9243;9244 9242 3 DNWLLAK Unmodified 858.45995 0.45995289 913 E9Q5E2;B1AZI6 BC005561;Thoc2 THO complex subunit 2 yes no 0 0 0 0 13 0 1 52.129 52.129 3 0.054304 17313 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.743 15.807 39.284 0 70.132 0 74.438 86.354 37 0 65 0 74 83 1 0 1 0 1 1 3400.4 3403 913 3291 8008 9245 9245 1 DNYEGYAPSDGYYR Unmodified 1668.6692 0.66922997 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 3 0.816 1 1 1 52.057 52.057 2;3 6.6664E-11 17259 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.42 112.74 58.275 55.006 77.745 0 104.74 76.961 55 56 74 0 102 75 3 2 1 0 2 3 14620 3404 2370 3292 8009;8010;8011 9246;9247;9248 9248 3 DNYVPEVSALDQEIIEVDPDTK Unmodified 2488.1857 0.18569468 1782 P63276 Rps17 40S ribosomal protein S17 yes yes 0 0 0 0 3.5 0.5 1 1 86.158 86.158 3;4 2.335E-11 31394 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.831 60.511 0 0 30.296 0 66.701 37.539 0 0 28 0 65 37 0 0 1 0 1 1 2865.2 3405 1782 3293 8012;8013 9249;9250 9249 2 DPAAAPATGNK Unmodified 1011.4985 0.49852324 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 5 0.816 1 1 1 37.441 37.441 2;3 1.4897E-08 10382 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.92 55.839 39.253 35.971 44.854 57.507 54.633 37.883 37 37 46 56 56 37 1 1 1 1 1 1 8029.6 3406 628;2074 3294 8014;8015;8016 9251;9252;9253 9251 3 DPAALPALFDLLATATDSQIR Unmodified 2198.1583 0.15829814 2723 Q8VI75;Q5U4C5;D6RES6;A0A2I3BRV3 Ipo4 Importin-4 yes no 0 0 0 0 9 0 1 110.6 110.6 3 9.9394E-06 37643 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.225 40.813 0 0 0 0 6.1722 3.0219 0 0 0 0 6 3 0 0 0 0 1 1 1159.6 3407 2723 3295 8017 9254 9254 1 DPADASGTR Unmodified 888.39372 0.39372381 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 2 0.816 1 1 1 26.556 26.556 2 0.0009881 5501 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.3 63.883 132.74 162.03 146.58 74.354 182.36 128.86 125 163 144 75 181 125 3 5 3 3 4 3 26816 3408 1386 3296 8018;8019;8020 9255;9256;9257;9258;9259 9256 5 DPAQGQLLK Unmodified 968.5291 0.52909508 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 6 0 1 51.467 51.467 2 0.050221 16011 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.908 14.406 49.014 0 57.816 56.759 53.312 77.363 46 0 56 56 56 74 1 0 1 1 1 1 5777.1 3409 1368 3297 8021 9260 9260 1 DPCDHPDTR Unmodified 1111.4353 0.43527105 1962 Q3U5Q7 Cmpk2 UMP-CMP kinase 2, mitochondrial yes yes 0 0 0 0 1 0 1 22.867 22.867 3 0.027167 3735 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.406 26.224 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 5653.3 3410 1962 3298 8022 9261 9261 1 DPDAGEGTK Unmodified 888.38249 0.38249043 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 2 0 1 34.191 34.191 2 0.0032785 9029 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.265 65.691 0 39.368 0 40.441 0 39.442 0 37 0 37 0 37 0 1 0 1 0 1 3606.1 3411 570 3299 8023 9262 9262 1 DPDAVGK Unmodified 700.33917 0.33916905 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 4 0 1 39.351 39.351 2 0.045499 11225 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.741 77.741 0 45.752 0 0 87.003 85.995 0 43 0 0 86 83 0 1 0 0 1 1 8078.1 3412 141 3300 8024 9263 9263 1 DPDNELYFAHGLFSAK Unmodified 1822.8526 0.85261407 1080 G3X9A7;Q8BLJ3 Plcxd3 PI-PLC X domain-containing protein 3 yes no 0 0 0 0 7 0 1 73.881 73.881 3 0.00025668 25737 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.918 46.839 0 29.328 27.741 17.85 67.17 0 0 28 28 19 65 0 0 1 1 1 1 0 3752 3413 1080 3301 8025 9264 9264 1 DPDPDFSTVK Unmodified 1119.5084 0.50841922 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 4 0 1 55.09 55.09 2 0.00017588 18692 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.943 58.898 69.745 0 0 40.441 0 88.478 65 0 0 37 0 83 1 0 0 1 0 1 5094.9 3414 2513 3302 8026 9265 9265 1 DPDRPPER Unmodified 980.46756 0.46755746 221 A0A0R4J2B2;Q6WVG3;Q8C7J6 Kctd12;Kctd12b BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 1 1 0 1 23.178 23.178 3 0.031908 3874 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.969 25.948 44.651 41.092 34.978 53.1 29.707 38.594 42 42 37 51 32 37 1 1 1 1 1 1 6093.9 3415 221 3303 8027 9266 9266 1 DPEAHIK Unmodified 808.40792 0.40791731 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;J3QM71;J3QP32 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 4 0 1 36.413 36.413 3 0.017201 9809 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.757 22.445 134.28 121.18 136.57 0 0 69.29 130 121 130 0 0 65 2 2 1 0 0 1 4793.4 3416 1081 3304 8028 9267;9268;9269 9267 3 DPEEIEKEEQAAAEK Unmodified 1714.7897 0.78973904 1374 P14206 Rpsa 40S ribosomal protein SA yes yes 0 0 0 1 3 0 1 54.938 54.938 3 0.029092 19008 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.242 28.377 0 38.921 26.723 27.787 65.093 47.179 0 37 28 28 65 46 0 1 1 1 1 1 3054.6 3417 1374 3305 8029 9270 9270 1 DPEGAEDEFVASIETWR Unmodified 1949.8643 0.86430096 1964 Q8C0M2;Q3U7M5;Q8VD66;A0A0G2JEC8 Abhd4 Abhydrolase domain-containing protein 4 yes no 0 0 0 0 3 0 1 85.06 85.06 3 7.991E-10 31232 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.455 74.095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3418 1964 3306 8030 9271 9271 1 DPEGAGGAGVLAAGK Unmodified 1268.6361 0.63607935 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 5.5 1.12 1 1 1 1 52.942 52.942 2;3 1.0882E-11 16682 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.6 61.776 78.567 133.34 81.969 125.66 129.63 67.492 74 131 83 121 130 65 2 3 2 3 3 1 12628 3419 2295 3307 8031;8032;8033;8034 9272;9273;9274;9275 9274 4 DPEGQPGGELMLGGTDSK Unmodified 1786.8043 0.80434324 1049 F8WIR1;P18242;F6Y6L6;A0A1B0GT66 Ctsd Cathepsin D yes no 0 0 0 0 3.5 0.5 1 1 61.084 61.084 3 2.9908E-07 21680 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.581 70.54 29.792 47.542 27.366 38.488 46.085 38.127 28 47 28 37 47 37 1 2 1 1 2 2 10390 3420 1049 3308 8035;8036 9276;9277 9276 2 DPELGVK Unmodified 756.40177 0.4017693 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 13 0 1 48.278 48.278 2 0.042653 15471 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.496 34.361 261.08 127.02 195.56 0 0 182.29 245 139 189 0 0 171 1 1 1 0 0 1 15932 3421 2361 3309 8037 9278 9278 1 DPELWGSVLLESNPYR Unmodified 1873.921 0.92102798 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6 0 1 87.458 87.458 3 0.032664 32761 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.63 22.486 9.5402 0 19.637 19.597 0 0 9 0 19 19 0 0 1 0 1 1 0 0 1670.3 3422 2185 3310 8038 9279 9279 1 DPENFPFVVLGNK Unmodified 1474.7456 0.7456298 1600 P51150 Rab7a Ras-related protein Rab-7a yes yes 0 0 0 0 9.33 2.62 1 1 1 82.137 82.137 2;3 0.00010725 29700 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.18 64.646 29.904 87.36 0 110.81 82.008 38.414 28 84 0 102 83 37 1 2 0 2 2 1 29593 3423 1600 3311 8039;8040;8041 9280;9281;9282 9280 3 DPEPPEPLTFR Unmodified 1296.635 0.63501672 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4 0 1 59.858 59.858 2 0.0051529 20916 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.664 34.443 29.687 27.172 36.989 28.399 0 0 28 28 37 28 0 0 1 1 1 1 0 0 6973.4 3424 1275 3312 8042 9283 9283 1 DPFAHLPK Unmodified 923.4865 0.48650199 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 7 0 1 54.785 54.785 3 0.061142 16755 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.029 16.874 0 0 0 70.004 55.36 0 0 0 0 65 56 0 0 0 0 1 1 0 3901.5 3425 3094 3313 8043 9284 9284 1 DPHLACVAYER Unmodified 1329.6136 0.61356977 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 4 0.816 1 1 1 44.284 44.284 3 0.0013936 13100 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.14 44.276 89.732 39.368 97.597 60.149 112.17 204.67 84 37 93 56 112 195 3 1 3 1 3 4 64179 3426 2185 3314 8044;8045;8046 9285;9286;9287;9288;9289 9289 5 DPLADLNIK Unmodified 997.54441 0.5444108 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 6 0 1 70.873 70.873 3 0.01653 25196 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.608 11.361 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3427 2129 3315 8047 9290 9290 1 DPLADLNIKDFL Unmodified 1372.7238 0.72383172 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 1 9 2.94 1 1 1 98.022 98.022 2;3 0.0054544 35151 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.802 44.683 51.296 66.188 30.246 20.05 0 69.29 48 65 31 19 0 65 2 2 2 1 0 2 11387 3428 2129 3316 8048;8049;8050 9291;9292;9293 9292 3 DPLGDFFEVESELGR Unmodified 1708.7944 0.79443049 1328 Q8BGR3;P08414 Camk4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 0 4.5 0.5 1 1 92.575 92.575 3 0.00098607 34863 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.885 51.494 0 9.576 3.246 0 11.292 6.223 0 9 3 0 11 6 0 1 1 0 2 1 1795.5 3429 1328 3317 8051;8052 9294;9295 9295 2 DPLSPFAVGGDDLDPFGCQR Unmodified 2161.9739 0.97386819 2407 Q8BHL8 Psmf1 Proteasome inhibitor PI31 subunit yes yes 0 0 0 0 5 0 1 87.425 87.425 3 4.5939E-11 33380 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.02 83.884 9.6251 0 5.3615 0 0 0 9 0 5 0 0 0 1 0 1 0 0 0 1691.8 3430 2407 3318 8053 9296 9296 1 DPNASPGDAGEQAIR Unmodified 1496.6855 0.68554874 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 3 0 1 40.412 40.412 3 0.042568 12143 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.308 22.157 39.366 66.506 0 71.045 0 59.696 37 65 0 65 0 56 1 1 0 1 0 1 3460.4 3431 2182 3319 8054 9297 9297 1 DPNIVIAK Unmodified 868.50182 0.5018177 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 9.5 3.5 1 1 55.7 55.7 2 0.031863 18940 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.223 15.506 0 126.63 126.34 150.8 182.63 114.97 0 121 130 148 185 111 0 2 2 2 2 1 9350.2 3432 1470 3320 8055;8056 9298;9299 9299 2 DPNNTDENEK Unmodified 1174.4738 0.47382463 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 5 0 1 92.17 92.17 2 0.053888 34801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.727 12.709 6.3762 9.1015 2.6678 0 6.0623 6.223 6 9 3 0 6 6 1 1 1 0 1 1 743.14 3433 2041 3321 8057 9300 9300 1 DPPSPSNEQK Unmodified 1097.4989 0.49891717 3410 yes no 0 0 0 0 5 0 1 37.031 37.031 3 0.0083768 9728 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.683 11.703 78.158 101.2 123.37 0 121.58 114.86 74 102 120 0 120 111 1 1 1 0 1 1 8345.9 + 3434 3410 3322 8058 9301 9301 1 DPPVVDCTCFGLPR Unmodified 1631.7436 0.74359766 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 0 5.5 0.5 1 1 67.055 67.055 2;3 0.00031327 23303 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.045 63.774 50.095 0 56.427 87.815 33.679 59.265 47 0 56 84 38 56 2 0 2 2 2 1 10536 3435 1944 3323 8059;8060 9302;9303 9303 2 DPQALSEHLK Unmodified 1136.5826 0.58258722 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 5 0 1 48.81 48.81 3 2.4966E-05 15385 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.4 71.029 69.235 0 85.643 85.615 0 78.884 65 0 83 83 0 74 1 0 1 1 0 1 7655.3 3436 2092 3324 8061 9304 9304 1 DPQELYDVYCFAR Unmodified 1674.7348 0.73480712 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 6 0 1 75.449 75.449 2 0.011903 27371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.693 38.787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3437 144 3325 8062 9305 9305 1 DPQHDLDR Unmodified 994.44682 0.44682202 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 4.25 5.07 2 1 1 29.289 29.289 2;3 0.0010899 6541 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.8 53.82 336.7 220.4 109.14 241.21 157.59 277.99 315 227 111 227 158 265 4 3 2 3 2 4 163130 3438 2958 3326 8063;8064;8065;8066 9306;9307;9308;9309;9310 9307 5 DPSAVAK Unmodified 686.3599 0.35990449 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 9.5 3.5 1 1 38.924 38.924 2 0.027165 10795 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.626 34.067 0 204.24 193.96 647.9 278.4 0 0 195 197 650 273 0 0 1 1 2 1 0 113420 3439 1316 3327 8067;8068 9311;9312 9312 2 DPSGAHPSVR Unmodified 1021.4941 0.49410656 2085 Q60749 Khdrbs1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 0 4 0 1 25.765 25.765 3 0.002533 5025 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.271 31.584 0 0 0 0 94.662 76.183 0 0 0 0 93 74 0 0 0 0 1 1 4161.4 3440 2085 3328 8069 9313 9313 1 DPSQELEFIADILSQDAK Unmodified 2017.9844 0.9844161 2120 Q61239 Fnta Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 0 9.5 3.5 1 1 108.44 108.44 3 1.1849E-06 37998 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.783 48.464 4.292 0 9 3.1637 6.1307 0 4 0 9 3 6 0 1 0 1 1 1 0 1930.5 3441 2120 3329 8070;8071 9314;9315 9314 2 DPSVVVR Unmodified 770.42865 0.42865276 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 5 0 1 40.358 40.358 2 0.043796 11313 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.134 17.889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3442 1798 3330 8072 9316 9316 1 DPTAFGSGIHK Unmodified 1128.5564 0.55637247 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 7 0.816 1 1 1 49.787 49.787 3 2.3951E-08 14387 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.94 59.146 197.06 58.884 284.58 262.38 257.38 347.63 185 56 278 260 269 333 2 1 3 3 3 3 28010 3443 3258 3331 8073;8074;8075 9317;9318;9319 9318 3 DPVPQSGLSPER Unmodified 1280.6361 0.63607935 1851 P97441;S4R169;S4R166;S4R2M0 Slc30a3 Zinc transporter 3 yes no 0 0 0 0 3 0 1 45.944 45.944 2 0.013639 14824 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.198 17.864 0 20.216 0 0 28.291 29.041 0 19 0 0 28 28 0 1 0 0 1 1 1544.1 3444 1851 3332 8076 9320 9320 1 DQAGEYECSAENDVSFPDVK Unmodified 2258.9274 0.92737151 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 3.2 0.748 1 2 2 65.14 65.14 3;4 9.8408E-11 23290 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.737 69.053 69.657 66.489 19 117.37 83.95 67.665 65 65 19 111 84 65 2 2 1 3 2 2 28566 3445 415 3333 8077;8078;8079;8080;8081 9321;9322;9323;9324;9325 9321 5 DQAQEDAQEIADTPSGDK Unmodified 1916.8236 0.82355836 1050 F8WIT2 Anxa6 Annexin yes yes 0 0 0 0 1 0 1 51.275 51.275 3 5.8127E-08 15491 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.236 54.413 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 6087.9 3446 1050 3334 8082 9326 9326 1 DQAQEDAQVAAEILEIADTPSGDK Unmodified 2513.1769 0.17692091 1380 P14824 Anxa6 Annexin A6 yes yes 0 0 0 0 3.33 0.471 2 1 91.252 91.252 3;4 1.5245E-16 32021 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.087 79.159 23.452 10.984 16.522 30.421 15.503 8.3719 22 11 16 29 16 8 4 2 2 4 3 1 5005.9 3447 1380 3335 8083;8084;8085 9327;9328;9329;9330 9329 4 DQDGCLPEEVTGCK Unmodified 1606.6603 0.66032154 3017 Q9D061;A0A0A6YWZ1 Acbd6 Acyl-CoA-binding domain-containing protein 6 yes no 0 0 0 0 3 0 1 54.691 54.691 3 0.0015683 18839 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.887 39.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3448 3017 3336 8086 9331 9331 1 DQEGQDVLLFIDNIFR Unmodified 1920.9581 0.95814177 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.17 2.97 1 1 1 1 2 106.64 106.64 2;3 9.7126E-59 37450 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 193.54 165.68 32.001 23.549 28.731 28.86 24.129 43.46 30 24 28 28 24 42 4 4 3 5 4 4 61693 3449 1642 3337 8087;8088;8089;8090;8091;8092 9332;9333;9334;9335;9336;9337;9338;9339 9334 8 DQELSPR Unmodified 843.40865 0.4086456 499 A2AP32;Q3UIU2 Ndufb6 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 yes no 0 0 0 0 2.5 0.5 1 1 32.725 32.725 2 0.021671 8325 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.14 26.52 197.52 104.57 76.491 0 121.58 114.86 185 112 74 0 120 111 2 2 1 0 2 2 24156 3450 499 3338 8093;8094 9340;9341 9340 2 DQEPIPQNIDR Unmodified 1323.6419 0.64189301 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;F6YKN8 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 2 0.816 1 1 1 45.725 45.725 2 5.1839E-08 14288 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.77 42.956 49.2 7.5527 20.125 29.405 0 50.102 46 9 19 28 0 47 3 1 1 2 0 2 6701.3 3451 581 3339 8095;8096;8097 9342;9343;9344 9343 3 DQEVLLQTGR Unmodified 1157.6041 0.60405094 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 7 3.54 1 1 1 1 48.993 48.993 2;3 0.00026321 15633 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.452 66.715 197.44 132.8 246.76 137.43 231.77 133.64 186 139 242 139 232 130 3 2 3 2 3 2 26934 3452 919;937 3340 8098;8099;8100;8101 9345;9346;9347;9348 9348 4 DQFPEVYVPTVFENYVADIEVDGK Unmodified 2772.317 0.31704321 3254 Q9QUI0;A0A0A6YXF6;Q9CR99;A0A0A6YWJ1 Rhoa;4930544G11Rik Transforming protein RhoA yes no 0 0 0 0 6 0.816 1 1 1 102.57 102.57 3;4 1.4724E-16 36136 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.542 82.585 17.087 8.8751 11.959 19.835 11.682 15.657 16 9 12 19 12 15 2 2 2 3 1 2 5482.2 3453 3254 3341 8102;8103;8104 9349;9350;9351 9349 3 DQFQEQQQELEK Unmodified 1548.7056 0.70561548 324 F8VPV0;A0A1W2P737;P48725 Pcnt Pericentrin yes no 0 0 0 0 3 0 1 59.981 59.981 3 0.053207 21283 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.645 6.6693 0 29.315 28.537 0 27.961 38.644 0 28 28 0 28 37 0 1 1 0 1 1 2473.4 3454 324 3342 8105 9352 9352 1 DQFSPDDFLGR Unmodified 1295.5782 0.57823012 876 E9Q0N0;Q9Z0R4 Itsn1 Intersectin-1 no no 0 0 0 0 5 0 1 69.352 69.352 2 0.0061569 25069 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.694 43.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3455 876 3343 8106 9353 9353 1 DQGAVLLGPVK Unmodified 1095.6288 0.62880913 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.5 2.69 1 1 1 1 61.522 61.522 2;3 1.4831E-08 20916 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.88 65.583 118.56 134.29 44.15 115.73 234.71 77.111 111 130 46 111 232 74 2 2 1 2 3 1 22666 3456 2295 3344 8107;8108;8109;8110 9354;9355;9356;9357 9354 4 DQGGAGEGLSR Unmodified 1045.4789 0.47885043 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 4.6 4.32 1 1 1 1 1 30.155 30.155 2 2.9662E-16 7140 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 166.65 89.575 40.153 337.94 410.18 315.19 397.99 454.19 38 326 411 316 404 436 2 5 6 5 4 5 142490 3457 1424 3345 8111;8112;8113;8114;8115 9358;9359;9360;9361;9362;9363;9364 9359 7 DQGGELLSLR Unmodified 1086.5669 0.56693715 2105 Q61035;G5E823 Hars;Hars2 Histidine--tRNA ligase, cytoplasmic no no 0 0 0 0 4.5 0.5 1 1 57.198 57.198 2 0.0078214 19406 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.721 14.609 108.3 139.36 73.822 95.026 118.2 86.13 102 139 74 93 120 83 2 2 1 2 2 1 7515.2 3458 2105 3346 8116;8117 9365;9366 9366 2 DQGGFGDR Unmodified 850.35694 0.35694438 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 3 0 1 31.473 31.473 2 0.016343 8087 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.972 37.28 48.894 25.554 56.272 57.023 44.185 38.181 46 28 56 56 46 37 1 1 1 1 1 1 3452.2 3459 1952 3347 8118 9367 9367 1 DQGNASPR Unmodified 843.38349 0.38349348 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 0 2 1 1 1 18.398 18.398 2 0.012018 2802 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.087 26.284 9.657 0 0 0 25.443 20.594 9 0 0 0 25 20 1 0 0 0 2 2 1456.2 3460 366 3348 8119;8120 9368;9369 9368 2 DQGNDSASTAPR Unmodified 1217.5273 0.52725718 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 13 0 1 23.702 23.702 2 0.0016995 3778 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.786 38.531 0 5.32 0 0 0 14.924 0 5 0 0 0 14 0 1 0 0 0 1 514.3 3461 2028 3349 8121 9370 9370 1 DQGPTAPDPLK Unmodified 1137.5666 0.5666028 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 6.25 3.96 1 1 1 1 51.025 51.025 2;3 0.00018769 16834 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.756 55.326 196.66 191.33 172.63 221.01 267.85 258.86 185 195 176 214 269 250 3 4 3 3 3 4 56512 3462 2295 3350 8122;8123;8124;8125 9371;9372;9373;9374 9372 4 DQGSCGSCWAFGAVEAISDR Unmodified 2171.9001 0.90005132 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 0 5.5 0.5 1 1 76.403 76.403 3 7.074E-07 28385 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.936 54.149 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 4295.6 3463 1344 3351 8126;8127 9375;9376 9375 2 DQGSYTCMASTELDQDLAK Unmodified 2131.9038 0.90379929 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 3.67 0.471 1 2 68.127 68.127 3;4 5.4725E-08 24424 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.059 80.903 30.044 0 58.08 56.383 101.76 68.288 28 0 56 56 102 66 1 0 2 2 3 2 13428 3464 20;2354 3352 8128;8129;8130 9377;9378;9379 9378 3 DQGTYEDYVEGLR Unmodified 1543.6791 0.67906638 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5 Myl6 Myosin light polypeptide 6 yes no 0 0 0 0 3.5 0.5 1 1 61.673 61.673 2;3 1.9743E-12 21947 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.582 77.281 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 2272.2 3465 316 3353 8131;8132 9380;9381 9380 2 DQHADPQTSR Unmodified 1153.5112 0.51121319 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 1.33 0.471 2 1 19.048 19.048 3 3.4857E-07 2789 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.91 94.89 58.624 9.1094 58.04 38.391 54.473 37.667 55 10 56 37 55 36 4 2 4 2 4 2 33800 3466 3391 3354 8133;8134;8135 9382;9383;9384;9385 9382 4 DQILSEK Unmodified 831.4338 0.43379771 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.5 0.5 1 1 49.476 49.476 2 0.028717 15707 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.308 33.15 225.34 254.99 322.57 259.55 287.49 327.59 213 259 324 260 297 315 2 2 2 2 2 2 28276 3467 510 3355 8136;8137 9386;9387 9386 2 DQINSDHR Unmodified 983.44207 0.44207099 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 0 0 0 0 2 0 1 20.874 20.874 3 0.0039176 3380 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.264 38.197 20.387 0 0 0 38.702 0 19 0 0 0 37 0 1 0 0 0 1 0 2235.7 3468 3066 3356 8138 9388 9388 1 DQITAGNAAR Unmodified 1015.5047 0.50467125 3146 Q9DCL9;D3Z6P1;D6RCU8 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 0 7.33 4.03 1 1 1 32.452 32.452 2 0.0024272 8012 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.958 12.919 168.35 145.94 74.597 66.318 111.05 58.649 158 149 75 65 111 56 3 3 2 1 2 1 12426 3469 3146 3357 8139;8140;8141 9389;9390;9391 9389 3 DQIYDIFQK Unmodified 1168.5764 0.57643921 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 0 7 0 1 74.447 74.447 3 0.011226 25965 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.492 19.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3470 1679 3358 8142 9392 9392 1 DQIYEIFQK Unmodified 1182.5921 0.59208927 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 13 0 1 73.496 73.496 3 0.022366 27700 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.44 15.917 88.564 32.466 55.619 57.893 0 69.29 83 37 56 56 0 65 1 1 1 1 0 1 4457.7 3471 1345 3359 8143 9393 9393 1 DQLALPWVPPLLR Unmodified 1516.8766 0.87658439 3212 Q9JIG7 Ccdc22 Coiled-coil domain-containing protein 22 yes yes 0 0 0 0 10 0 1 94.946 94.946 2 0.0058314 30997 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.598 32.429 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1204.7 3472 3212 3360 8144 9394 9394 1 DQLDETVNVEPLTK Deamidation (N) 1600.7832 0.7831971 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 1 0 0 13 0 1 65.245 65.245 3 0.013952 23717 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.319 24.687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3473 895 3361 8145 9395 9395 244 1 DQLGGWFQSSLLTSVATR Unmodified 1964.9956 0.99558991 2413 Q8BIJ6;E9PWN2 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 0 9 0 1 87.398 87.398 3 0.01442 30733 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.111 15.649 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2355.7 3474 2413 3362 8146 9396 9396 1 DQLIVNLLK Unmodified 1054.6386 0.63864553 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 10.2 1.57 1 1 2 1 1 79.822 79.822 2;3 0.00042787 30628 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.07 56.243 275.89 349.88 407.8 447.28 452.36 281.85 260 352 416 436 454 269 5 6 7 6 5 3 211760 3475 1315 3363 8147;8148;8149;8150;8151;8152 9397;9398;9399;9400;9401;9402;9403 9403 7 DQLIVNLLKEEQAPQNK Unmodified 1979.0688 0.068754852 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1 8.6 2.24 2 2 1 74.043 74.043 3;4 2.6622E-13 25199 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.69 92.803 448.39 389.35 232.62 383.55 487.94 257.09 421 398 232 365 489 246 5 5 3 3 4 3 60621 3476 1315 3364 8153;8154;8155;8156;8157 9404;9405;9406;9407;9408 9407 5 DQLLAAK Unmodified 757.4334 0.43340378 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 0 1 51.892 51.892 2 0.027615 16212 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.492 4.8653 78.543 66.65 87.95 64.446 72.135 67.232 74 69 88 65 74 65 1 1 1 1 1 1 21645 3477 551 3365 8158 9409 9409 1 DQLQTFSEEHPVLLTEAPLNPR Unmodified 2533.2813 0.28126682 1691 P61164 Actr1a Alpha-centractin yes yes 0 0 0 0 4.67 0.471 1 2 70.978 70.978 3;4 7.701E-16 25736 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.79 74.021 89.417 53.991 74.356 69.666 36.587 98.094 84 56 75 66 38 93 3 2 3 2 2 3 19211 3478 1691 3366 8159;8160;8161 9410;9411;9412;9413 9410 4 DQLQTFSEEHPVLLTEAPLNPSK Unmodified 2592.3071 0.30714722 2672 Q8R5C5;E0CZD4;E0CYB4 Actr1b Beta-centractin yes no 0 0 0 0 4 0 1 72.778 72.778 4 4.6854E-10 26594 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.413 53.541 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2766.6 3479 2672 3367 8162 9414 9414 1 DQLQTFSEEHPVLLTEAPLNPSK Deamidation (N) 2593.2912 0.29116281 2672 Q8R5C5;E0CZD4;E0CYB4 Actr1b Beta-centractin yes no 0 1 0 0 6 0 1 72.6 72.6 3 0.0060872 26062 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.668 27.076 29.923 0 20.407 0 28.291 29.041 28 0 19 0 28 28 1 0 1 0 1 1 1392.5 3480 2672 3367 8163 9415 9415 963 1 DQNLPQILEESR Unmodified 1440.7209 0.72087161 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 62.981 62.981 2 1.6101E-05 22313 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.89 65.331 29.924 0 20.141 8.2827 46.777 58.361 28 0 19 9 47 56 2 0 1 1 2 2 7857.6 3481 1226 3368 8164;8165 9416;9417 9417 2 DQNTVETLQR Unmodified 1202.5891 0.58912916 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 39.276 39.276 2 2.4231E-08 11835 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 144.47 89.408 378.15 0 284.44 192.17 499.63 354.01 354 0 272 196 503 341 3 0 2 2 4 2 147550 3482 2148 3369 8166;8167;8168;8169 9418;9419;9420;9421 9418 4 DQPPEADGQELPLEASDPESR Unmodified 2279.019 0.018963706 2484 Q8C078;Q3TV45 Camkk2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 0 0 0 0 1 0 1 58.408 58.408 3 4.2235E-11 18756 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.384 79.13 0 19.892 19.365 9 0 20.254 0 19 19 9 0 19 0 1 1 1 0 1 8375.9 3483 2484 3370 8170 9422;9423 9422 2 DQPPNSVEGLLNALR Unmodified 1621.8424 0.84238373 2800 Q921M7 Fam49b Protein FAM49B yes yes 0 0 0 0 6.5 0.5 1 1 80.92 80.92 3 0.0068882 29799 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.947 28.345 20.292 27.777 38.708 17.747 77.635 0 19 28 37 19 75 0 1 2 1 1 2 0 8326.6 3484 2800 3371 8171;8172 9424;9425 9424 2 DQQGQELK Unmodified 944.45632 0.45632407 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 3 0 1 36.792 36.792 2 0.038359 10539 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.371 27.068 49.179 0 30.048 0 16.852 87.997 46 0 28 0 19 83 1 0 1 0 1 1 3094.5 3485 2028 3372 8173 9426 9426 1 DQQVEAAQR Unmodified 1043.4996 0.49958587 2942 Q9CQV4 Fam134c Protein FAM134C yes yes 0 0 0 0 1.5 0.5 1 1 27.377 27.377 2 0.0011732 5950 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.2 51.227 20.206 27.731 41.759 43.074 18.245 29.327 19 28 42 42 19 28 1 2 2 2 1 1 4115.3 3486 2942 3373 8174;8175 9427;9428 9428 2 DQSAEQAPSDLSQR Unmodified 1530.691 0.69102805 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 1.5 0.5 1 1 37.858 37.858 2;3 4.0166E-16 10206 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 127.56 79.555 20.134 37.121 18.769 0 0 50.102 19 37 19 0 0 47 1 2 1 0 0 1 6379.7 3487 179 3374 8176;8177 9429;9430 9429 2 DQSFPTPAPR Unmodified 1114.5407 0.5407224 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.5 4.5 1 1 44.7 44.7 2 4.6266E-05 13586 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.78 54.993 69.745 0 100.63 0 84.521 175.61 65 0 93 0 83 167 1 0 1 0 1 2 19324 3488 2295 3375 8178;8179 9431;9432 9432 2 DQSGEYECSALNDVAAPDVR Deamidation (N) 2195.9277 0.92770586 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 1 0 0 1.67 0.471 1 2 58.7 58.7 3 9.3937E-11 21488 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.109 72.117 0 0 47.738 0 19.874 0 0 0 47 0 19 0 0 0 3 0 1 0 18556 3489 1103;2192 3376 8180;8181;8182 9433;9434;9435 9435 293 3 DQSGEYECSALNDVAAPDVR Unmodified 2194.9437 0.94369027 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 0 0 0 5 4.05 1 2 1 1 59.165 59.165 3 1.2586E-22 20591 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.77 111.95 39.15 107.59 64.399 154.34 28.409 59.696 37 103 66 148 28 56 3 3 3 6 2 2 88853 3490 1103;2192 3376 8183;8184;8185;8186;8187 9436;9437;9438;9439;9440;9441;9442 9436 7 DQTAASAQAQEDAQR Unmodified 1588.7077 0.70774074 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 1 0 1 31.284 31.284 3 2.0515E-11 7380 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.58 87.51 0 29.792 0 20.608 8.4674 0 0 28 0 19 9 0 0 1 0 1 1 0 2908.3 3491 2559 3377 8188 9443 9443 1 DQTDFEHR Unmodified 1046.4417 0.44173664 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 4.75 4.82 1 1 1 1 29.788 29.788 3 3.9593E-06 6605 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 161.27 111.84 218.41 109.29 206.87 249.29 183.9 206.1 205 111 204 241 185 195 5 2 4 5 3 4 98170 3492 1568 3378 8189;8190;8191;8192 9444;9445;9446;9447;9448;9449 9444 6 DQTNDQVTIDSALATQK Unmodified 1846.8909 0.89085007 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 4 0.816 1 1 1 60.388 60.388 3 1.1349E-06 21165 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.66 75.028 67.165 65.947 34.199 65.726 35.979 28.821 65 65 37 65 37 28 2 1 1 2 1 1 15828 3493 1618 3379 8193;8194;8195 9450;9451;9452 9451 3 DQVANSAFVER Deamidation (N) 1235.5782 0.57823012 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 1 0 0 2 0 2 48.121 48.121 2 2.1234E-06 14905 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.31 63.415 89.461 34.596 83.466 85.608 65.358 29.848 84 37 83 84 65 28 2 1 2 2 1 1 13651 3494 1322 3380 8196;8197 9453;9454 9453 391 2 DQVANSAFVER Unmodified 1234.5942 0.59421454 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 45.76 45.76 2 3.7073E-20 14257 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 174.77 117.72 345.86 171.09 155.69 585.85 517.84 143.23 324 177 158 566 519 139 4 3 2 5 4 1 186000 3495 1322 3380 8198;8199;8200;8201;8202 9455;9456;9457;9458;9459;9460 9456 6 DQVLQNLGSVESYSEEK Unmodified 1923.9062 0.90616578 875 F8WGN6;E9Q0J5;Q9QXL2 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A yes no 0 0 0 0 5 0 1 69.97 69.97 3 3.9239E-06 25322 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.772 48.706 0 39.368 0 40.133 16.362 48.569 0 37 0 37 19 46 0 1 0 1 1 1 5242.6 3496 875 3381 8203 9461 9461 1 DQVPVVPGSLK Unmodified 1137.6394 0.63937381 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.5 2.69 1 1 1 1 60.103 60.103 3 0.0016919 20910 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.091 38.756 59.454 64.28 207.82 196.37 232.95 132.2 56 65 204 195 231 129 2 2 4 4 3 3 25458 3497 2295 3382 8204;8205;8206;8207 9462;9463;9464;9465;9466 9466 5 DRANDDLLSEFPDK Unmodified 1633.7584 0.75837933 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 1 4 0 1 61.84 61.84 3 0.0044185 21827 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.501 28.635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3498 407 3383 8208 9467 9467 1 DRDDIVK Unmodified 859.43995 0.43994572 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 1 3 0 1 36.794 36.794 3 0.023613 10546 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.713 22.609 430.8 299.79 377.98 195.25 0 479.7 405 315 376 191 0 450 2 2 2 1 0 2 15968 3499 1096 3384 8209 9468;9469 9469 2 DRDITLQQDAYWK Unmodified 1650.8002 0.80018457 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 8 3.56 1 1 1 57.879 57.879 3 2.4473E-15 19876 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.55 107.59 215.85 297.13 258.84 274.25 172.72 321.27 204 297 268 268 176 306 3 3 3 3 1 3 23452 3500 510 3385 8210;8211;8212 9470;9471;9472 9472 3 DRDYDDIDDDDPFNPQAR Unmodified 2180.8883 0.88828388 1922 Q3TH73 Ttyh2 Protein tweety homolog 2 yes yes 0 0 0 1 1 0 1 57.759 57.759 3 2.7081E-07 18539 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.738 70.533 0 0 20.558 0 0 9.594 0 0 19 0 0 9 0 0 1 0 0 1 2025 3501 1922 3386 8213 9473 9473 1 DRDYSDHPSGGSYR Unmodified 1610.671 0.67096131 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;Q9WV02;A2AFI3 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 1 2 0 1 26.373 26.373 4 0.033634 5492 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 39.947 33.218 20.178 13.134 23.996 0 29.288 0 19 14 23 0 28 0 1 1 1 0 1 0 1999.7 3502 385;3339 3387 8214 9474 9474 1 DREAAEGLGSHER Unmodified 1425.6597 0.65966834 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 1 5.33 5.44 1 1 1 26.625 26.625 4 0.00013084 5329 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.803 54.705 78.962 55.839 26.699 89.66 141.17 96.717 74 56 28 83 139 93 2 1 1 2 2 2 11764 3503 1155 3388 8215;8216;8217 9475;9476;9477 9475 3 DREDFVPFTGEK Unmodified 1438.6729 0.67285879 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 1 6 0 1 57.363 57.363 3 0.00049952 18810 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.815 53.406 117.43 97.292 198.45 137.22 153.33 164.05 111 102 195 139 158 158 1 1 1 1 1 1 14156 3504 3232 3389 8218 9478 9478 1 DREEALHQFR Unmodified 1299.632 0.63199703 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 1 3 0 1 34.337 34.337 4 0.038807 9410 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.425 13.077 50.204 0 38.08 38.171 0 39.442 47 0 37 37 0 37 1 0 1 1 0 1 2933.3 3505 2146 3390 8219 9479 9479 1 DREELAQQYETILR Unmodified 1762.885 0.88497683 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 1 4.5 0.5 1 1 58.708 58.708 3 2.8903E-35 20142 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 175.66 145.55 139.16 65.13 0 127.55 191.8 153.36 130 65 0 120 194 149 2 1 0 2 2 2 40321 3506 3216 3391 8220;8221 9480;9481 9481 2 DREGFFTNGLTLGAK Deamidation (N) 1625.8049 0.80493559 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 1 0 1 7.78 2.94 2 2 2 1 2 68.006 68.006 3;4 6.5784E-07 23150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.63 73.847 733.18 690.57 760.1 1013.7 802.14 777.18 689 698 760 982 819 748 7 7 7 9 8 7 189100 3507 3220 3392 8222;8223;8224;8225;8226;8227;8228;8229;8230 9482;9483;9484;9485;9486;9487;9488;9489;9490;9491 9487 1107 10 DRENYDR Unmodified 966.41552 0.41552189 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 1 1 0 1 19.015 19.015 3 0.058872 2895 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.351 29.286 17.109 11.614 0 15.302 0 9.594 16 12 0 14 0 9 1 1 0 1 0 1 9085.8 3508 2135 3393 8231 9492 9492 1 DRETMGHR Unmodified 1000.4509 0.45086154 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 1 3.5 0.5 1 1 16.268 16.268 3 0.032496 2407 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.582 20.93 23.401 4.7514 30.449 11.798 0 9.594 22 5 29 12 0 9 2 1 2 1 0 1 1837.6 3509 1209;1808 3394 8232;8233 9493;9494 9493 2 DREVGIPPEQSLETAK Unmodified 1767.9003 0.90029254 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 1 5.4 3.83 2 2 1 51.821 51.821 3;4 1.0385E-16 17226 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.83 105.68 325.83 297.19 304.87 129.13 289.46 252.21 306 293 291 121 286 240 8 7 5 3 6 5 29109 3510 2836 3395 8234;8235;8236;8237;8238 9495;9496;9497;9498;9499;9500;9501;9502;9503;9504 9499 10 DRFQLTDSQIYEVLSVIR Unmodified 2181.143 0.14298243 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 1 9.33 2.62 1 1 1 87.919 87.919 3 8.3127E-07 34533 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.948 53.465 109.96 46.848 77.331 75.581 121.51 46.136 103 47 75 74 121 46 3 2 2 1 2 1 23072 3511 1158 3396 8239;8240;8241 9505;9506;9507;9508 9508 4 DRIEIFPSR Unmodified 1131.6037 0.60365701 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 1 6 0 1 50.956 50.956 3 0.0062763 15801 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.197 33.657 39.414 56.926 0 30.123 25.55 68.561 37 56 0 28 28 65 1 1 0 1 1 1 2970.1 3512 1648 3397 8242 9509 9509 1 DRLEEVR Unmodified 915.47739 0.47739386 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 1 3 0 1 31.144 31.144 3 0.017095 7884 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.093 26.403 108.27 89.625 121.19 61.22 138.32 123.97 102 93 120 65 139 120 1 1 1 1 1 1 23438 3513 1325 3398 8243 9510 9510 1 DRLEGLLAFK Unmodified 1160.6554 0.65535823 150 A0A0R4J023;Q9JLZ3 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 1 10 2.16 1 1 1 68.632 68.632 3 8.8225E-05 25128 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.3 61.378 237.66 256.96 154.89 218.9 366.45 306.15 223 259 148 204 370 297 2 3 1 2 3 3 30260 3514 150 3399 8244;8245;8246 9511;9512;9513 9513 3 DRLPLLDIACNK Unmodified 1426.7602 0.76023401 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 1 9 0 1 67.865 67.865 3 0.00068254 21495 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.327 51.864 0 38.102 75.743 302.27 250.98 307.31 0 37 74 285 260 295 0 1 1 2 1 2 18778 3515 2582 3400 8247 9514;9515 9514 2 DRPFFPGLVK Unmodified 1174.6499 0.64987892 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 1 10 0.816 1 1 1 62.92 62.92 3 3.3888E-05 17389 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.27 77.857 677.1 631.05 226.1 798.72 982.55 788.52 634 636 213 760 996 766 2 2 1 3 2 2 178080 3516 866 3401 8248;8249;8250 9516;9517;9518 9517 3 DRPFFTGLVK Unmodified 1178.6448 0.64479354 866;1385 E9PZF0;Q5NC79;P15532;Q5NC80 Gm20390;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 0 1 9 0 1 62.251 62.251 3 0.050055 19136 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.025 29.191 98.973 40.551 102.85 102.94 128.34 84.816 93 46 102 102 130 83 1 1 1 1 1 1 143810 3517 866;1385 3402 8251 9519 9519 1 DRPQEADGIDSVIVVDNVPQVGPDR Unmodified 2689.3307 0.33073621 2569 Q8JZQ9 Eif3b Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 1 3 0 1 66.397 66.397 4 0.00012984 24128 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.205 32.148 0 19.892 19.365 0 19.874 0 0 19 19 0 19 0 0 1 1 0 1 0 2050.2 3518 2569 3403 8252 9520 9520 1 DRYDSDR Unmodified 925.38897 0.38897279 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 1.5 0.5 1 1 19.282 19.282 3 0.016635 3022 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.046 39.022 53.949 52.385 85.753 62.91 44.56 88.272 51 54 85 63 47 84 3 3 3 3 2 3 13386 3519 2377 3404 8253;8254 9521;9522;9523 9523 3 DSAATTDEER Unmodified 1093.4524 0.4523609 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 13 0 1 24.54 24.54 2 8.8619E-08 4061 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.43 78.862 0 33.738 18.534 0 0 14.924 0 32 19 0 0 14 0 1 1 0 0 1 1294.7 3520 1955 3405 8255 9524 9524 1 DSAQKDDMIFEDCGNVPSEPK Unmodified 2381.0151 0.015140656 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 1 5.2 3.92 3 1 1 60.482 60.482 3;4;5 7.3924E-11 21291 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.855 71.694 138.22 155.7 184.91 141.55 177.92 149.6 130 158 186 139 180 142 3 4 4 3 3 3 35081 3521 1369 3406 8256;8257;8258;8259;8260 9525;9526;9527;9528;9529;9530 9529 6 DSASPGAASGLDPLDSAR Unmodified 1685.7857 0.78565671 1274 O88703 Hcn2 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 yes yes 0 0 0 0 3 0 1 57.03 57.03 3 0.010253 19866 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.453 22.914 30.044 0 0 0 0 49.036 28 0 0 0 0 46 1 0 0 0 0 1 3871 3522 1274 3407 8261 9531 9531 1 DSATDEQLFR Unmodified 1180.536 0.53603095 3203 Q9JHK4;A0A2K6EDL0 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 0 3 0 1 50.631 50.631 2 0.00291 16936 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.862 54.76 48.955 35.437 37.661 0 48.116 0 46 37 37 0 46 0 1 1 1 0 1 0 7190 3523 3203 3408 8262 9532 9532 1 DSATGLSK Unmodified 777.38685 0.38684752 1457 Q3KQM4;Q80XR5;P26369 U2af2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 6 0 1 39.976 39.976 2 0.017341 10758 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.165 37.331 59.76 65.13 0 80.882 0 69.29 56 65 0 74 0 65 1 1 0 1 0 1 12655 3524 1457 3409 8263 9533 9533 1 DSAVDLSSLK Unmodified 1033.5292 0.52915466 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 5.33 0.471 2 1 62.074 62.074 2;3 2.6971E-05 20976 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.53 39.625 39.701 0 46 0 76.454 27.666 37 0 46 0 74 28 1 0 1 0 1 1 5383.3 3525 1275 3410 8264;8265;8266 9534;9535;9536 9536 3 DSCPLDCK Unmodified 993.38957 0.38956641 1838 P84104 Srsf3 Serine/arginine-rich splicing factor 3 yes yes 0 0 0 0 4.5 0.5 1 1 43.957 43.957 2 0.0022654 12995 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.26 74.108 0 29.152 38.285 0 0 0 0 28 37 0 0 0 0 1 1 0 0 0 6962.9 3526 1838 3411 8267;8268 9537;9538 9538 2 DSDEADLVLAK Unmodified 1174.5717 0.57174776 3141 Q9DCC5;P23198 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 0 4 0 1 61.855 61.855 3 0.047409 21783 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.402 3.6526 0 19.729 29.112 0 57.607 28.204 0 19 28 0 56 28 0 1 1 0 1 1 2892.6 3527 3141 3412 8269 9539 9539 1 DSDGQVFGALASEPFK Unmodified 1666.7839 0.7838658 2028 Q4KMM3;E9Q0A7;A0A2R8VHT3;B1H3M0 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 7 3.03 2 2 1 76.164 76.164 3;4 7.2059E-08 28283 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.34 81.363 78.733 46.283 156.85 111.15 137.73 164.27 75 46 148 111 139 157 3 1 3 3 3 3 36603 3528 2028 3413 8270;8271;8272;8273;8274 9540;9541;9542;9543;9544 9540 5 DSDILGK Unmodified 746.38103 0.38103386 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 52.275 52.275 2 0.017579 16973 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.36 36.747 88.254 183.69 349.17 308.42 394.38 104.26 83 176 346 308 394 102 1 1 2 2 2 1 140310 3529 2175 3414 8275;8276 9545;9546 9545 2 DSDSILETLQR Unmodified 1275.6307 0.63065962 3074 Q9D6J6;M0QWP9 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 64.328 64.328 2;3 3.063E-20 22777 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 175.65 94.382 127.25 191.13 159.45 94.043 280.48 174.31 120 186 158 93 278 167 2 3 2 1 4 2 31052 3530 3074 3415 8277;8278;8279;8280 9547;9548;9549;9550;9551 9548 5 DSDYYNMLLK Unmodified 1260.5696 0.56963927 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 9.5 3.5 1 1 71.706 71.706 2;3 0.0015841 26741 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.349 45.744 88.362 100.6 117.91 192.12 162.33 212.83 83 102 120 185 167 204 1 2 2 3 2 3 13957 3531 3123 3416 8281;8282 9552;9553;9554 9554 3 DSEDVYNLK Unmodified 1081.4928 0.49276916 2642 Q8R1G2;A0A2I3BPJ4;E0CXH4 Cmbl Carboxymethylenebutenolidase homolog yes no 0 0 0 0 4.5 0.5 1 1 54.25 54.25 2;3 0.0035629 17952 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.692 29.501 20.076 27.962 28.517 0 0 0 19 28 28 0 0 0 1 1 1 0 0 0 2060.4 3532 2642 3417 8283;8284 9555;9556 9556 2 DSEGVDIK Unmodified 861.40798 0.40797689 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 3 0.816 1 1 1 45.651 45.651 2;3 0.0068704 14138 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.525 20.398 0 96.455 149.34 112.42 0 168.43 0 93 148 111 0 158 0 1 1 1 0 1 12240 3533 1250 3418 8285;8286;8287 9557;9558;9559 9559 3 DSEGWDHAHGGGTGDTSR Unmodified 1840.7361 0.73608076 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 1 0 1 28.707 28.707 4 3.2845E-07 6174 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.808 75.323 0 0 37.42 58.68 15.839 38.99 0 0 37 56 19 37 0 0 1 1 1 1 2723.5 3534 1561 3419 8288 9560 9560 1 DSELYQVFHACR Unmodified 1523.6827 0.68271197 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 9.5 3.5 1 1 58.126 58.126 3 0.00019939 19422 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.479 49.82 48.928 150.76 204.01 166.61 199.85 171.25 46 148 204 167 204 166 1 2 2 2 2 2 86683 3535 3172 3420 8289;8290 9561;9562 9561 2 DSEPAEAGGIQR Unmodified 1228.5684 0.56839372 2739 Q91VH2 Snx9 Sorting nexin-9 yes yes 0 0 0 0 1 0 1 34.746 34.746 3 0.0020251 8919 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 61.435 31.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3536 2739 3421 8291 9563 9563 1 DSESSPSDFSVSLK Unmodified 1483.6678 0.66783299 1231 O55033 Nck2 Cytoplasmic protein NCK2 yes yes 0 0 0 0 4 0 1 62.44 62.44 3 0.0019347 21976 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.265 35.492 39.406 0 49.573 0 0 0 37 0 46 0 0 0 1 0 1 0 0 0 2841.8 3537 1231 3422 8292 9564 9564 1 DSETEVEELR Unmodified 1205.5412 0.54117591 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 13 0 1 44.608 44.608 2 0.056812 13712 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.436 25.32 78.184 110.98 110.68 53.265 71.623 97.094 74 111 111 56 74 93 1 1 1 1 1 1 7684.6 3538 2028 3423 8293 9565 9565 1 DSETEVEELRK Unmodified 1333.6361 0.63613893 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 3 0 1 45.328 45.328 3 0.019843 14412 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.436 28.2 0 58.811 46.243 0 48.116 0 0 56 46 0 46 0 0 1 1 0 1 0 18611 3539 2028 3424 8294 9566 9566 1 DSETGENIR Unmodified 1019.452 0.45196697 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 13 0 1 29.417 29.417 2 0.00091007 6327 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.39 60.587 0 48.03 54.691 67.785 0 0 0 46 56 65 0 0 0 1 1 1 0 0 9236 3540 1533 3425 8295 9567 9567 1 DSFDDRGPSLNPVLDYDHGSR Unmodified 2361.0622 0.062165924 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 1 4 0 1 57.73 57.73 4 3.5496E-11 19946 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.574 64.355 79.402 0 0 79.495 73.752 0 74 0 0 74 74 0 1 0 0 1 1 0 5499.8 3541 2602 3426 8296 9568 9568 1 DSFLGSIPGK Unmodified 1019.5288 0.52876073 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 66.543 66.543 3 9.0045E-05 21679 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.331 51.17 0 29.792 0 0 37.384 38.375 0 28 0 0 37 37 0 1 0 0 1 1 3157.9 3542 2413 3427 8297;8298 9569;9570 9570 2 DSFPNFLACK Unmodified 1197.5488 0.54884425 2956 Q9CR61 Ndufb7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 0 8.5 0.5 1 1 72.952 72.952 3 0.0018017 24673 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.726 42.872 109.07 74.058 0 160.7 56.767 0 102 74 0 148 56 0 2 1 0 2 1 0 11773 3543 2956 3428 8299;8300 9571;9572 9571 2 DSGAGFSASEPDAVHVVLDR Unmodified 2027.9548 0.95484731 2359 Q8BFQ8 Pddc1 Parkinson disease 7 domain-containing protein 1 yes yes 0 0 0 0 3 0 1 61.996 61.996 3 3.9601E-08 22091 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.452 43.116 29.732 17.583 37.596 27.678 36.441 28.808 28 19 37 28 37 28 1 1 1 1 1 1 6033.9 3544 2359 3429 8301 9573 9573 1 DSGLPSQGLNFR Unmodified 1289.6364 0.6364137 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8 Dlg1 Disks large homolog 1 yes no 0 0 0 0 5.5 0.5 1 1 57.031 57.031 2 0.00096569 19380 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.288 45.915 88.564 24.033 62.864 52.33 98.501 77.139 83 25 62 53 99 75 2 1 2 2 2 2 7657.4 3545 767 3430 8302;8303 9574;9575 9574 2 DSGLPSQGLSFK Unmodified 1234.6194 0.61936665 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 10.5 2.5 1 1 62.391 62.391 3 0.0028719 19759 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.448 28.593 138.11 125.86 124.52 152.86 78.656 145.93 130 129 129 148 83 139 2 2 2 2 1 2 13734 3546 690 3431 8304;8305 9576;9577 9576 2 DSGQFTDEFLPEQR Unmodified 1667.7427 0.74272927 354 A0A286YCQ5;O88322 Nid2 Nidogen-2 yes no 0 0 0 0 3 0 1 65.361 65.361 3 5.712E-05 23657 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.574 50.126 0 0 0 30.604 0 49.036 0 0 0 28 0 46 0 0 0 1 0 1 2655.5 3547 354 3432 8306 9578 9578 1 DSGSDGHSVSSR Unmodified 1189.496 0.49595705 2227 Q6P9Q6;Q80YW9;Q80YW7;Q80YW6 Fkbp15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 1.5 0.5 1 1 17.6 17.6 3 5.7912E-21 2746 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.88 102.87 5.3201 6.2863 13.39 6.097 15.41 0 5 6 13 6 15 0 1 1 2 1 2 0 2807.5 3548 2227 3433 8307;8308 9579;9580 9579 2 DSGSVSLQETR Unmodified 1177.5575 0.55749468 1225 O54988 Slk STE20-like serine/threonine-protein kinase yes yes 0 0 0 0 3 0 1 38.106 38.106 2 4.6578E-09 11178 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.85 74.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3549 1225 3434 8309 9581 9581 1 DSGVQACFNR Unmodified 1152.4982 0.49820566 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 8 3.56 1 1 1 41.194 41.194 2 1.4577E-08 11792 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.94 114.12 159.19 35.328 191.82 216.04 283.75 190.17 149 37 185 213 287 185 2 1 2 3 3 2 26540 3550 622 3435 8310;8311;8312 9582;9583;9584 9582 3 DSHADDPESIK Unmodified 1212.5259 0.5258602 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3;A2AMI7 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 3 0 1 38.186 38.186 3 0.00049018 11199 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.659 56.054 39.41 26.695 26.326 48.709 0 39.442 37 28 28 46 0 37 1 1 1 1 0 1 2439.8 3551 133 3436 8313 9585 9585 1 DSHGVAQVR Unmodified 967.48354 0.48354187 1718 P62301;Q921R2 Rps13 40S ribosomal protein S13 yes no 0 0 0 0 3 0 1 24.031 24.031 3 0.027071 4602 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.161 35.745 0 9.2416 20.004 0 19.874 0 0 9 19 0 19 0 0 1 1 0 1 0 3901.3 3552 1718 3437 8314 9586 9586 1 DSIFSNLIGQLDYK Unmodified 1611.8144 0.81443765 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 10 1.87 1 1 1 1 91.365 91.365 3 9.5902E-17 33163 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.1 91.919 69.278 46.157 104.77 0 112.59 191.87 65 46 99 0 111 183 2 2 2 0 2 4 18912 3553 2435 3438 8315;8316;8317;8318 9587;9588;9589;9590 9587 4 DSIKLDDDSER Unmodified 1291.5892 0.58918874 2264 Q6ZQ38;D3YWC5 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 1 4 0 1 43.018 43.018 3 0.00080919 12928 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.566 57.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3554 2264 3439 8319 9591 9591 1 DSIQLDEDSER Unmodified 1305.5685 0.56845329 2266 Q6ZQ73 Cand2 Cullin-associated NEDD8-dissociated protein 2 yes yes 0 0 0 0 1 0 1 45.676 45.676 2 0.036369 13333 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.727 34.215 29.687 27.172 36.989 28.399 0 0 28 28 37 28 0 0 1 1 1 1 0 0 2860.6 3555 2266 3440 8320 9592 9592 1 DSIVHQAGMLK Unmodified 1197.6176 0.61759251 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 6.5 0.5 1 1 51.278 51.278 3 0.00036368 15997 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.862 49.609 156.94 124.25 208.71 84.646 0 128.99 148 130 204 83 0 121 2 2 2 1 0 2 14583 3556 2971 3441 8321;8322 9593;9594 9593 2 DSLDINVK Unmodified 902.47091 0.4709115 169 J3QQ44;A0A0R4J0B8;Q62421;J3QK75 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 5 0 1 56.969 56.969 3 0.027293 19327 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.607 18.386 0 28.679 66.576 45.64 35.615 28.832 0 28 65 46 37 28 0 1 1 1 1 1 3073.2 3557 169 3442 8323 9595 9595 1 DSLDMEVK Unmodified 935.427 0.42699778 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 8.5 4.5 1 1 55.298 55.298 2 0.0097414 18777 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.442 52.375 179.19 0 0 118.07 172.95 166.69 167 0 0 111 176 161 1 0 0 1 1 1 16294 3558 491 3443 8324;8325 9596;9597 9596 2 DSLENTLTESEAR Unmodified 1463.674 0.673981 664 CON__Q9UE12;CON__Q15323;CON__Q14532 no no 0 0 0 0 2.5 0.5 1 1 53.405 53.405 2 2.0135E-40 18146 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 194.39 7.6318 0 0 0 0 17.512 170.79 0 0 0 0 19 167 0 0 0 0 1 2 15905 + 3559 664 3444 8326;8327 9598;9599 9599 2 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR Unmodified 3254.5116 0.5116137 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 0 5.5 0.5 1 1 84.834 84.834 4 2.7685E-10 32256 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.971 57.658 19.204 19.907 36.98 39.563 27.309 39.986 18 19 37 38 28 38 2 1 3 2 2 2 9090.4 3560 1186 3445 8328;8329 9600;9601;9602;9603 9600 4 DSLIDSLT Unmodified 862.42838 0.42837799 1239 O55135 Eif6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 0 4.5 0.5 1 1 76.455 76.455 2 0.017962 28349 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.454 48.785 0 0 19.685 19.594 0 28 0 0 19 19 0 28 0 0 1 1 0 1 3353.5 3561 1239 3446 8330;8331 9604;9605 9604 2 DSLISSEEEEGLVR Unmodified 1561.7471 0.74714594 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 1 0 1 60.885 60.885 2 0.0020323 20028 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.563 30.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3562 2012 3447 8332 9606 9606 1 DSLLQDGEFTMDLR Oxidation (M) 1654.7509 0.75085111 1758;652 P62962;Q5SX49;CON__P02584 Pfn1 Profilin-1;Profilin no no 0 0 1 0 4 0 1 70.093 70.093 3 0.0023791 25369 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.097 33.448 0 0 0 41.534 0 39.442 0 0 0 38 0 37 0 0 0 1 0 1 4389.9 + 3563 1758;652 3448 8333 9607 9607 31 1 DSLLQDGEFTMDLR Unmodified 1638.7559 0.75593649 1758;652 P62962;Q5SX49;CON__P02584 Pfn1 Profilin-1;Profilin no no 0 0 0 0 6.6 3.26 1 2 1 1 77.382 77.382 2;3 3.3683E-25 28920 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.7 104.44 89.529 56.341 162.93 144.31 111.41 165.25 84 56 157 140 111 158 3 2 4 4 3 5 41127 + 3564 1758;652 3448 8334;8335;8336;8337;8338 9608;9609;9610;9611;9612 9610 5 DSLNEAWADLLELLDTR Unmodified 1972.9742 0.97418577 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 10.5 2.5 1 1 114.11 114.11 3 1.1916E-06 44804 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.088 53.678 6.4295 1.6945 2.0721 6.4345 0 6.396 6 2 2 6 0 6 1 1 1 2 0 1 1435.3 3565 2186 3449 8339;8340 9613;9614 9614 2 DSLNSIALK Unmodified 959.52876 0.52876073 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09;A0A2R8VKF8 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 9.33 2.62 1 1 1 59.874 59.874 2 0.00051673 18646 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.86 60.38 319.83 365.45 398.39 219.77 253.31 185.26 302 370 399 220 255 176 3 3 3 2 2 2 27827 3566 2028 3450 8341;8342;8343 9615;9616;9617 9616 3 DSLPSLDLASATSGDK Unmodified 1575.7628 0.76279601 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 5.5 0.5 1 1 69.678 69.678 3 0.022087 24683 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.597 17.019 49.358 0 0 0 0 69.29 46 0 0 0 0 65 1 0 0 0 0 1 4026.7 3567 2204 3451 8344;8345 9618;9619 9619 2 DSLSFSNTNNK Unmodified 1225.5575 0.55749468 1861 P98086 C1qa Complement C1q subcomponent subunit A yes yes 0 0 0 0 13 0 1 49.403 49.403 3 0.02319 16027 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.796 26.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3568 1861 3452 8346 9620 9620 1 DSLTVSWSSPVAPFDYYR Unmodified 2088.9793 0.97927114 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 10.5 2.5 1 1 84.189 84.189 2;3 1.1485E-15 32883 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.576 77.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3569 2479 3453 8347;8348 9621;9622 9622 2 DSLYVDGDCTMDIR Unmodified 1658.6916 0.69162167 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 0 0 0 3.25 0.829 1 1 2 62.369 62.369 2;3 5.5347E-18 22248 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 134.2 103.65 129.55 29.144 39.884 141.64 52.516 108.3 121 28 37 130 56 103 4 2 1 3 2 3 22184 3570 3220 3454 8349;8350;8351;8352 9623;9624;9625;9626;9627;9628 9624 6 DSNEDVSDPK Unmodified 1104.4571 0.45711193 2521 Q8CC88 Vwa8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 0 2 0 1 37.137 37.137 3 0.026475 10499 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.894 28.836 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3571 2521 3455 8353 9629 9629 1 DSNGAILVYDVTDEDSFQK Deamidation (N) 2115.9484 0.94842452 1516 P35282 Rab21 Ras-related protein Rab-21 yes yes 0 1 0 0 3 0 1 80.989 80.989 3 0.00010127 30525 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.989 41.304 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 1463.8 3572 1516 3456 8354 9630 9630 566 1 DSNYEQEGK Unmodified 1068.436 0.43598256 1101 Q68ED2;G5E8D5 Grm7 Metabotropic glutamate receptor 7 yes no 0 0 0 0 3 0 1 35.717 35.717 2 0.024925 10054 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.353 42.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3573 1101 3457 8355 9631 9631 1 DSNYHLLMSVQESLER Unmodified 1919.9047 0.90472599 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 6 0.816 1 1 1 69.116 69.116 3 8.7706E-08 24308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.32 94.374 20.292 125.54 110.01 82.769 132.18 29.848 19 121 111 84 130 28 1 3 2 2 2 1 36302 3574 1458 3458 8356;8357;8358 9632;9633;9634 9633 3 DSPDVTNR Unmodified 902.40937 0.40937388 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 3 0 1 28.967 28.967 2 0.01422 6907 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.813 53.685 0 29.336 27.284 28.097 46.825 0 0 28 28 28 46 0 0 1 1 1 1 0 2355.5 3575 893 3459 8359 9635 9635 1 DSPGETDAFGNSEGK Deamidation (N) 1510.606 0.60596101 789 D3Z7P3 Gls Glutaminase kidney isoform, mitochondrial yes yes 0 1 0 0 2 0.816 1 1 1 49.571 49.571 3 2.4458E-16 14787 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.73 102.25 89.774 255.69 104.26 131.95 183.44 204.01 84 241 102 124 180 195 2 4 3 3 3 4 36357 3576 789 3460 8360;8361;8362 9636;9637;9638;9639;9640;9641 9636 208 6 DSPGETDAFGNSEGK Unmodified 1509.6219 0.62194543 789 D3Z7P3 Gls Glutaminase kidney isoform, mitochondrial yes yes 0 0 0 0 8 5 1 1 47.864 47.864 3 3.5028E-30 15625 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.09 132.15 99.426 72.032 0 0 58.576 0 93 74 0 0 56 0 1 1 0 0 1 0 24671 3577 789 3460 8363;8364 9642;9643 9642 2 DSPPPSSNIVQGQIK Unmodified 1565.8049 0.80493559 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 5 0 1 52.82 52.82 3 0.00057607 17286 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.657 33.025 59.296 83.269 111.06 84.17 54.365 195.66 56 83 111 84 56 185 1 1 2 2 1 2 3385.7 3578 2790 3461 8365 9644;9645 9644 2 DSPQLLMDAK Unmodified 1116.5485 0.5485099 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 5 0 1 61.151 61.151 2 0.044809 21250 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.124 13.079 20.273 0 19.143 29.463 0 0 19 0 19 28 0 0 1 0 1 1 0 0 1501.1 3579 728 3462 8366 9646 9646 1 DSPSVWAAVPGK Unmodified 1212.6139 0.61388734 1758;652 P62962;Q5SX49;J3QMC2;CON__P02584 Pfn1 Profilin-1;Profilin no no 0 0 0 0 8.5 2.22 1 1 2 1 1 63.962 63.962 2;3 2.6613E-15 20412 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 142.43 104.12 427.48 387.99 67.461 260.03 340.97 377.57 400 389 65 241 342 361 6 6 1 3 4 5 184990 + 3580 1758;652 3463 8367;8368;8369;8370;8371;8372 9647;9648;9649;9650;9651;9652;9653 9650 7 DSQAALPK Unmodified 828.43413 0.43413207 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 0 7.25 3.34 2 1 1 42.243 42.243 2;3 0.0025547 12286 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.56 82.954 489.79 426.66 635.33 312.87 573.66 664.8 462 435 626 306 584 639 4 3 4 2 4 4 53817 3581 3267 3464 8373;8374;8375;8376 9654;9655;9656;9657 9657 4 DSQDAGGFGPEDR Unmodified 1349.5484 0.54838655 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1 0 1 40.642 40.642 2 6.5033E-22 11353 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 161.23 119.69 29.84 0 34.299 28.21 18.578 0 28 0 33 28 19 0 1 0 1 1 1 0 18531 3582 3266 3465 8377 9658 9658 1 DSQEEEKTEALTSAK Unmodified 1664.7741 0.77408897 1365 P13020;CON__Q3SX14 Gsn Gelsolin yes no 0 0 0 1 4 0 1 49.894 49.894 3 6.3863E-05 16237 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.911 51.858 39.564 27.124 0 0 0 49.036 37 28 0 0 0 46 1 1 0 0 0 1 3822.7 + 3583 1365 3466 8378 9659 9659 1 DSQFSYAVFGPR Unmodified 1372.6412 0.64116473 195 G3UYZ1;A0A0R4J117;Q8R366;D3Z4Q8 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 8 0 1 66.132 66.132 3 3.4657E-06 21467 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.39 74.273 60.088 0 0 80.08 100.73 66.416 56 0 0 75 102 65 1 0 0 1 1 1 5577.6 3584 195 3467 8379 9660 9660 1 DSQSPNTATQR Unmodified 1203.548 0.54799262 2863 Q99LG2;E9PV58;A0A1B0GT37 Tnpo2 Transportin-2 yes no 0 0 0 0 2.33 0.471 2 1 22.747 22.747 2;3 4.1105E-33 4050 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 189.57 124.33 60.679 27.643 57.648 24.901 61.833 24.156 57 28 55 23 61 23 3 1 2 1 3 1 8319.5 3585 2863 3468 8380;8381;8382 9661;9662;9663 9662 3 DSQTQAILTK Unmodified 1103.5823 0.58225287 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7;B1ATU4 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 6 0 1 50.791 50.791 2 1.763E-05 15734 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.756 28.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3586 1066 3469 8383 9664 9664 1 DSQVVQVVLDGLK Unmodified 1398.7718 0.77184455 1188 O35344 Kpna3 Importin subunit alpha-4 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 84.041 84.041 3 0.00055565 30564 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.285 41.35 117.93 79.246 170.35 112.19 100.99 135.7 111 84 167 111 102 130 3 3 4 3 2 3 12081 3587 1188 3470 8384;8385;8386;8387 9665;9666;9667;9668 9666 4 DSSDISR Unmodified 778.34571 0.34571099 446 Q9QXG2;A2AD03;Q3UR39 Chm Rab proteins geranylgeranyltransferase component A 1 yes no 0 0 0 0 3 0 1 26.041 26.041 2 0.02751 5593 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.352 28.183 49.005 25.861 37.457 17.46 57.134 18.624 46 28 37 19 56 19 1 1 1 1 1 1 4241.2 3588 446 3471 8388 9669 9669 1 DSSDQNFDYMFK Unmodified 1495.5926 0.59255956 1743 P62823;A0A286YDR2;Q9CXS2 Rab3c Ras-related protein Rab-3C yes no 0 0 0 0 8 3.56 1 1 1 69.403 69.403 3 1.3294E-06 25602 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.87 90.96 89.615 140.91 56.681 145.34 170.78 193.4 84 139 56 139 176 186 2 3 1 3 3 3 11045 3589 1743 3472 8389;8390;8391 9670;9671;9672 9672 3 DSSGCYDR Unmodified 958.34506 0.34505906 2110 Q61137;A0A0A6YWE6;Q3TPU9;A0A0A6YXJ4;A0A0A6YWD1 Astn1 Astrotactin-1 yes no 0 0 0 0 1.5 0.5 1 1 24.96 24.96 2 0.013464 4903 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.181 66.626 39.652 0 8.2606 60.373 18.195 9.0748 37 0 9 56 19 9 2 0 1 2 1 1 5059.8 3590 2110 3473 8392;8393 9673;9674 9674 2 DSSGEVLSSV Unmodified 978.45057 0.45056999 194 A0A0R4J0Z3;P55088 Aqp4 Aquaporin-4 yes no 0 0 0 0 4.75 4.82 1 1 1 1 58.386 58.386 2 2.4846E-09 20536 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 158.36 137.46 227.93 229.34 247.7 244.24 234.28 301.39 214 231 251 241 240 288 4 3 4 5 3 4 123340 3591 194 3474 8394;8395;8396;8397 9675;9676;9677;9678;9679;9680 9678 6 DSSLFDIFTLSCNLLK Unmodified 1871.9339 0.93390085 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 0 10 0 1 107 107 3 9.9035E-12 33815 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.3 90.244 26.825 0 0 13.116 0 0 25 0 0 12 0 0 1 0 0 1 0 0 2618.9 3592 383 3475 8398 9681 9681 1 DSSQTLEPK Unmodified 1003.4822 0.48220447 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8 Synj1 Synaptojanin-1 yes no 0 0 0 0 4 0 1 41.228 41.228 3 0.0012367 12056 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.688 42.385 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 15450 3593 927 3476 8399 9682 9682 1 DSSSSSDFSSR Unmodified 1160.4582 0.45817456 73 H7BX08;A0A0A6YY67;Q8C1B1 Camsap2 Calmodulin-regulated spectrin-associated protein 2 yes no 0 0 0 0 2.5 0.5 1 1 30.467 30.467 2 0.0018507 7651 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.883 54.721 49.273 16.894 0 49.092 27.237 19.477 46 19 0 47 28 19 1 1 0 2 1 1 3080.8 3594 73 3477 8400;8401 9683;9684 9684 2 DSSSSSLR Unmodified 837.38282 0.38282478 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 3 0 1 24.332 24.332 2 0.004955 4770 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.49 41.079 0 38.429 56.196 46.929 0 78.884 0 37 56 46 0 74 0 1 1 1 0 1 5363.3 3595 3285 3478 8402 9685 9685 1 DSSSTNLESMDTS Unmodified 1372.53 0.53001888 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 2 0.816 1 1 1 50.61 50.61 2 3.0323E-19 15214 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 151.83 138.06 20.387 0 67.538 48.128 18.625 38.911 19 0 65 47 19 37 1 0 3 3 1 2 19030 3596 2264 3479 8403;8404;8405 9686;9687;9688;9689 9687 4 DSSTCPGDYVLSVSENSR Unmodified 1971.848 0.84799897 1571 P47941;A0A338P6Q0;A0A338P675 Crkl Crk-like protein yes no 0 0 0 0 4 0 1 60.159 60.159 3 0.0013617 21132 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.422 35.322 30.044 0 0 9.837 0 0 28 0 0 9 0 0 1 0 0 1 0 0 2971 3597 1571 3480 8406 9690;9691 9690 2 DSSTSPGDYVLSVSENSR Unmodified 1898.8494 0.84937918 2166 Q64010;Q5ND50;Q3TQV3 Crk Adapter molecule crk no no 0 0 0 0 3.5 0.5 1 1 60.684 60.684 3 5.0357E-08 21300 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.92 90.569 14.791 34.797 22.817 50.011 0 0 14 34 23 47 0 0 1 2 1 2 0 0 12780 3598 2166 3481 8407;8408 9692;9693 9693 2 DSSVAAR Unmodified 704.34532 0.34531706 2926 Q9CQF3;A0A1D5RM23 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 0 3 0.816 1 1 1 22.705 22.705 2 0.054652 4038 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.311 32.31 70.278 74.917 27.225 119.09 90.518 115.74 66 74 28 112 93 111 3 2 1 3 2 3 8172.4 3599 2926 3482 8409;8410;8411 9694;9695;9696 9694 3 DSSVAEEGAQEAVAR Unmodified 1517.6958 0.69577907 2659 Q8R3F5;A0A2R8VHT7 Mcat Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes no 0 0 0 0 1 0 1 43.833 43.833 3 7.9663E-05 12469 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.725 67.499 9.4447 19.256 19.355 0 0 9.594 9 19 19 0 0 9 1 1 1 0 0 1 9707.6 3600 2659 3483 8412 9697 9697 1 DSTEAAICDIR Unmodified 1249.5609 0.5608655 2199 Q6KAU4;A2ARF0 Mvb12b Multivesicular body subunit 12B yes no 0 0 0 0 2 0 1 49.244 49.244 2 0.0042597 15761 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.735 39.262 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 1688.8 3601 2199 3484 8413 9698 9698 1 DSTEQFQEYYR Unmodified 1464.6157 0.61573784 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 4 0 1 52.223 52.223 2 0.0031304 17352 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.781 55.514 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 2937.4 3602 2537 3485 8414 9699 9699 1 DSTGTYTCVAR Unmodified 1229.5347 0.53465075 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 7.33 4.03 1 1 1 37.492 37.492 2 1.6169E-07 10436 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.93 70.379 69.638 56 67.76 49.816 45.544 38.709 65 56 65 47 47 37 1 1 2 1 2 1 15606 3603 331 3486 8415;8416;8417 9700;9701;9702 9700 3 DSTISNESSQSCSSGR Unmodified 1700.6908 0.69077005 619 B2RQR5;Q8BPQ7;D3Z7V4 Sgsm1 Small G protein signaling modulator 1 yes no 0 0 0 0 2 0 1 30.003 30.003 3 0.00048054 7104 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.246 39.188 9.5401 0 19.653 19.239 18.99 0 9 0 19 19 19 0 1 0 1 1 1 0 1107.1 3604 619 3487 8418 9703 9703 1 DSTLIMQLLR Unmodified 1188.6536 0.65364367 1715;1005;1773;1797;1706;2944;1256 Q9CQV8;P68510;P63101;F6VW30;P68254;F6YY69;O70456;P61982;P62259 Ywhab;Ywhah;Ywhaz;Ywhaq;Sfn;Ywhag;Ywhae 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 0 9.62 3.67 1 1 1 1 1 1 2 83.076 83.076 2;3 3.8468E-61 26511 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 217.66 150.49 1601.7 1357.4 1721.2 1394.7 2021.9 2004.1 1507 1395 1711 1397 2052 1937 8 9 8 8 7 9 1077100 3605 2944;1797;1773;1005;1256;1706;1715 3488 8419;8420;8421;8422;8423;8424;8425;8426 9704;9705;9706;9707;9708;9709;9710;9711;9712;9713;9714;9715;9716 9711 13 DSTLIMQLLR Oxidation (M) 1204.6486 0.64855829 1715;1005;1773;1797;1706;2944;1256 Q9CQV8;P68510;P63101;F6VW30;P68254;F6YY69;O70456;P61982;P62259 Ywhab;Ywhah;Ywhaz;Ywhaq;Sfn;Ywhag;Ywhae 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 1 0 9 0 1 77.002 77.002 3 0.011042 25936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.067 33.682 20.195 38.006 0 0 47.137 28.503 19 37 0 0 46 28 1 1 0 0 1 1 2848.3 3606 2944;1797;1773;1005;1256;1706;1715 3488 8427 9717 9717 46 1 DSTLTEPVVMALLK Unmodified 1515.8218 0.82183121 2102 Q60996 Ppp2r5c Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform yes yes 0 0 0 0 9 0 1 84.367 84.367 3 0.05142 29346 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.195 13.089 0 69.16 0 0 48.116 0 0 65 0 0 46 0 0 1 0 0 1 0 24648 3607 2102 3489 8428 9718 9718 1 DSTPTASESQR Unmodified 1177.5211 0.52110917 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 1.5 0.5 1 1 25.51 25.51 2;3 5.8345E-20 5104 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 171.87 121.07 0 19.914 33.196 29.528 19.197 29.3 0 19 33 28 19 28 0 1 2 1 1 2 17023 3608 1275 3490 8429;8430 9719;9720 9720 2 DSTVAVVVYDITNLNSFQQTSK Unmodified 2428.2122 0.21218421 1697 P61294;A0A1L1SRS6 Rab6b Ras-related protein Rab-6B yes no 0 0 0 0 7 0 1 94.824 94.824 3 0.0019599 35005 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.257 22.219 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1340.8 3609 1697 3491 8431 9721 9721 1 DSTVAVVVYDITNVNSFQQTTK Unmodified 2428.2122 0.21218421 1515 P35279 Rab6a Ras-related protein Rab-6A yes yes 0 0 0 0 7 0 1 89.787 89.787 4 0.006012 33150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.436 7.2583 20.147 47.585 0 30.604 0 0 19 46 0 28 0 0 1 1 0 1 0 0 2248.6 3610 1515 3492 8432 9722 9722 1 DSVSAAEVGTGQYATTK Unmodified 1683.7952 0.79515877 3345 Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 0 8.5 4.5 1 1 51.446 51.446 3 3.2431E-25 17078 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.34 115.68 69.451 39.368 49.422 0 116.11 0 65 37 46 0 111 0 1 1 1 0 2 0 20523 3611 3345 3493 8433;8434 9723;9724 9723 2 DSVSGGGPCTNR Unmodified 1205.5095 0.50949863 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 3.5 0.5 1 1 28.896 28.896 2 1.7958E-05 6853 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.3 69.424 14.788 18.829 23.305 8.448 0 9.594 14 19 23 9 0 9 1 1 1 1 0 1 1535.3 3612 1089 3494 8435;8436 9725;9726 9725 2 DSVTHLFDR Unmodified 1088.5251 0.52507234 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 5.5 0.5 1 1 52.165 52.165 3 0.00086482 16345 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.898 49.554 49.187 39.368 28.761 28.89 47.467 67.936 46 37 28 28 46 65 1 1 1 1 1 2 6925.4 3613 2300 3495 8437;8438 9727;9728 9728 2 DSVTNQIR Unmodified 931.47231 0.47230849 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 7 3.54 1 1 1 1 36.108 36.108 2 0.00035167 9800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 154.71 65.584 257.7 256.32 112.55 171.34 0 236.65 242 259 111 172 0 222 3 3 1 2 0 2 52528 3614 644 3496 8439;8440;8441;8442 9729;9730;9731;9732 9729 4 DSVVAGFQWATK Unmodified 1307.651 0.65100113 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 10 2.16 1 1 1 72.106 72.106 2;3 4.2193E-09 23692 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.39 65.056 178.24 35.328 129.24 50.278 141.14 123.89 167 37 120 46 139 120 2 1 1 1 1 1 14330 3615 1652 3497 8443;8444;8445 9733;9734;9735 9734 3 DSVVEILFEQDNEEK Unmodified 1792.8367 0.83668923 3286 Q9QZB7 Actr10 Actin-related protein 10 yes yes 0 0 0 0 4 0 1 83.832 83.832 3 8.724E-05 31813 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.541 62.914 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 2740.2 3616 3286 3498 8446 9736 9736 1 DSWNSGIISVMSALSVAPSK Unmodified 2048.0248 0.024841127 2662 Q8R404 Qil1 Protein QIL1 yes yes 0 0 0 0 11.2 0.829 1 1 2 96.304 96.304 3;4 6.8261E-11 27559 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.251 60.078 9.657 20.216 30.296 19 14.644 99.138 9 19 28 19 14 93 1 1 1 1 1 2 28357 3617 2662 3499 8447;8448;8449;8450 9737;9738;9739;9740;9741 9741 5 DSYDSYATHNE Unmodified 1300.4844 0.48438931 1677 P60824 Cirbp Cold-inducible RNA-binding protein yes yes 0 0 0 0 1.5 0.5 1 1 38.987 38.987 2 9.9714E-14 11441 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 154.84 139.69 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 2 0 0 9237.5 3618 1677 3500 8451;8452 9742;9743 9743 2 DSYESYGNSR Deamidation (N) 1177.4524 0.4523609 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;Q9WV02 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 1 0 0 2 0 1 37.016 37.016 2 0.032756 10325 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.882 62.851 39.701 0 0 0 58.576 0 37 0 0 0 56 0 1 0 0 0 1 0 2906.7 3619 385;3339 3501 8453 9744 9744 102 1 DSYESYGNSR Unmodified 1176.4683 0.46834532 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;Q9WV02 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 3 0 1 35.084 35.084 2 2.3735E-05 9716 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.82 98.743 0 38.781 35.128 57.91 64.038 37.615 0 37 37 56 65 37 0 1 1 1 1 1 6428 3620 385;3339 3501 8454 9745 9745 1 DSYGGPPR Unmodified 847.38243 0.38243085 385 A0A2I3BRL8;Q91VM5 Rbmxl1 RNA binding motif protein, X-linked-like-1 yes no 0 0 0 0 3.5 0.5 1 1 31.608 31.608 2 0.0090193 7625 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.33 17.575 39.477 58.855 81.325 106.64 0 69.29 37 56 83 102 0 65 1 1 2 2 0 1 11022 3621 385 3502 8455;8456 9746;9747 9747 2 DSYIEVLLPLGTDPELR Unmodified 1929.0095 0.0095086389 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 91.815 91.815 3 4.021E-06 34760 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.583 50.385 12.824 2.8731 6.3037 9.6683 8.9699 9.594 12 3 6 9 9 9 2 1 1 1 1 1 2301.2 3622 3305 3503 8457;8458 9748;9749 9749 2 DSYLILETLPTEYDSR Unmodified 1913.9258 0.92583859 463;14 A0A087WPH7;F6Q2E3;A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A no no 0 0 0 0 4.5 0.5 1 1 81.955 81.955 3 0.0033803 31045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.998 33.728 0 0 20.558 30.105 26.54 49.345 0 0 19 28 28 47 0 0 1 1 1 2 9028.8 3623 14;463 3504 8459;8460 9750;9751 9751 2 DSYSSSR Unmodified 800.33006 0.33006092 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;Q9ESC8;Q9WV02 Rbmxl1;Rbmx;Aff4 RNA binding motif protein, X-linked-like-1;AF4/FMR2 family member 4;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 3.5 0.5 1 1 22.121 22.121 2 0.008866 3788 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.5 70 9.657 53.517 44.676 57.622 49.07 67.89 9 51 46 56 51 65 1 1 1 2 1 1 14430 3624 385;3339 3505 8461;8462 9752;9753 9752 2 DSYVGDEAQSK Unmodified 1197.515 0.51496116 1673;1781;1791 P60710;E9Q5F4;G3UZ07;E9Q606;V9GXQ2;P63260;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actb;Actg1;Gm17087;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 0 4.69 3.35 4 3 4 2 1 2 42.795 42.795 2;3;4 2.704E-53 12381 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 208.75 155.42 17637 15277 19219 14278 18642 21190 16612 15746 19250 14213 19129 20374 14 16 16 15 15 17 5994200 3625 1673;1781;1791 3506 8463;8464;8465;8466;8467;8468;8469;8470;8471;8472;8473;8474;8475;8476;8477;8478 9754;9755;9756;9757;9758;9759;9760;9761;9762;9763;9764;9765;9766;9767;9768;9769;9770;9771;9772;9773;9774;9775 9774 22 DSYVGDEAQSKR Unmodified 1353.6161 0.61607219 1673;1781;1791 P60710;E9Q5F4;G3UZ07;E9Q606;V9GXQ2;P63260;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actb;Actg1;Gm17087;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 1 6.25 3.96 1 1 1 1 36.71 36.71 3 1.0784E-26 10163 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.2 130.62 432.13 589.91 979.41 591.51 114.23 382.67 409 604 955 590 120 361 3 4 5 3 2 3 236770 3626 1673;1781;1791 3507 8479;8480;8481;8482 9776;9777;9778;9779;9780;9781 9778 6 DTAEGVSQELISAGLVDGR Unmodified 1915.9487 0.9486993 2228 Q6P9R2 Oxsr1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 0 3.5 0.5 1 1 74.584 74.584 3 2.54E-07 27407 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.55 58.061 9.5635 29.009 8.259 20.275 29.288 0 9 28 9 19 28 0 1 2 1 1 1 0 5808.6 3627 2228 3508 8483;8484 9782;9783 9783 2 DTAGDASESALLK Unmodified 1276.6147 0.61467521 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 5.67 3.35 1 2 2 1 54.483 54.483 2;3 2.7893E-33 18447 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 186.74 120.67 414.6 369.06 120.9 501.71 400.34 204.5 388 370 120 472 399 194 7 7 2 8 6 4 145610 3628 2253 3509 8485;8486;8487;8488;8489;8490 9784;9785;9786;9787;9788;9789;9790;9791;9792 9787 9 DTASLSTTPSESPR Unmodified 1447.6791 0.67906638 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 3.5 0.5 1 1 40.627 40.627 2 5.0784E-21 11832 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.4 107.86 25.752 40.143 17.286 34.682 18.984 14.924 24 38 19 33 19 14 1 1 1 2 1 1 6191.4 3629 416 3510 8491;8492 9793;9794 9794 2 DTASSANGPSR Deamidation (N) 1062.4578 0.45778063 3244 Q9JLV1 Bag3 BAG family molecular chaperone regulator 3 yes yes 0 1 0 0 1 0 1 23.639 23.639 2 8.5056E-07 4009 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.36 87.52 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1781.9 3630 3244 3511 8493 9795 9795 1113 1 DTAVELGK Unmodified 831.4338 0.43379771 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.5 0.5 1 1 49.148 49.148 2 0.0075608 15522 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.14 39.873 0 106.86 99.811 92.968 145.26 153.62 0 102 102 93 148 148 0 1 1 1 1 1 11575 3631 510 3512 8494;8495 9796;9797 9796 2 DTAVELGKGPEPK Unmodified 1339.6983 0.69834526 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 9 4 1 1 49.024 49.024 3;4 0.00034658 15802 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.831 65.958 216.69 149.44 242.85 176.23 88.453 263.98 204 158 241 176 93 250 2 2 2 2 1 2 15938 3632 510 3513 8496;8497 9798;9799 9798 2 DTDAAVGDNIGYITFVLFPR Unmodified 2183.0899 0.089884225 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 9 2.35 1 2 1 99.297 99.297 3;4 3.7972E-11 35439 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.752 69.808 10.705 4.9599 5.41 18.837 18.828 35.178 10 5 5 18 18 33 2 1 1 2 2 2 16189 3633 2971 3514 8498;8499;8500;8501 9800;9801;9802;9803;9804 9801 5 DTDGVLETDDTGIAPGSPR Unmodified 1914.8807 0.88067931 644 B9EKR1;A0A0J9YVD2 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta yes no 0 0 0 0 2 0 1 57.092 57.092 3 8.6296E-09 19406 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.79 95.171 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 4055.1 3634 644 3515 8502 9805 9805 1 DTDIVDEAIYYFK Unmodified 1590.7454 0.74535503 1126 H7BWZ3;Q9JM76;D3Z2F7;D3Z2F8;A0A0G2JFK7 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 6.8 3.19 1 1 2 1 94.05 94.05 2;3 4.3015E-15 35613 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.77 83.537 20.195 8.7783 60.19 19.095 39.039 78.836 19 9 57 19 38 75 2 1 4 2 1 4 23089 3635 1126 3516 8503;8504;8505;8506;8507 9806;9807;9808;9809;9810;9811 9810 6 DTDLEFVDGEGKPR Unmodified 1576.7369 0.73691561 2615 Q8K406 Lgi3 Leucine-rich repeat LGI family member 3 yes yes 0 0 0 1 3 0 1 55.596 55.596 3 0.001016 19275 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.044 47.381 69.267 64.053 26.104 0 0 49.036 65 65 28 0 0 46 1 1 1 0 0 1 3483.1 3636 2615 3517 8508 9812 9812 1 DTDPDSKPFSLQETYEAK Unmodified 2069.9429 0.94294522 112;3317 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;Q9R1T4 Sept11;Sept6 Septin-11;Septin-6 no no 0 0 0 1 7 3.54 1 1 1 1 61.401 61.401 3;4 6.9844E-07 21583 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.287 71.165 268.76 231.41 368.24 124.58 108.41 314.3 253 232 352 120 111 297 3 3 3 2 2 3 37342 3637 112;3317 3518 8509;8510;8511;8512 9813;9814;9815;9816;9817 9817 5 DTDSEEEIR Unmodified 1092.4571 0.45711193 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;Q9D6P8;A0A1Y7VK66 Calm1;Calml3 Calmodulin-like protein 3 yes no 0 0 0 0 13 0 1 33.268 33.268 2 2.2336E-08 8115 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 167.04 130.64 200.54 273.02 44.408 248.35 253.19 214.5 188 270 46 234 257 208 1 2 1 2 1 1 222100 3638 1340 3519 8513 9818;9819 9818 2 DTDSEEEIREAFR Unmodified 1595.7063 0.70634376 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;Q9D6P8;A0A1Y7VK66 Calm1;Calml3 Calmodulin-like protein 3 yes no 0 0 0 1 2 0.816 1 1 1 52.521 52.521 3 1.5993E-18 17296 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 146.5 114.68 518.53 155.06 543.55 546.9 464.83 535.97 487 158 529 538 486 514 5 2 3 5 5 4 301470 3639 1340 3520 8514;8515;8516 9820;9821;9822;9823;9824 9821 5 DTDVEYLEIARPPLALR Unmodified 1970.0473 0.047291129 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 1 8 3.56 1 1 1 72.822 72.822 3 1.5396E-06 26651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.771 59.665 118.65 142.73 66.623 147.83 125.61 185.1 111 139 65 139 130 177 2 3 2 3 3 4 31501 3640 3210 3521 8517;8518;8519 9825;9826;9827;9828 9825 4 DTEGGPAGLDSR Unmodified 1173.5262 0.52619455 2884 Q99NF7 Ppm1b yes yes 0 0 0 0 2 0 1 37.724 37.724 2 4.5065E-13 10787 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 127.42 74.257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3641 2884 3522 8520 9829 9829 1 DTEGMDEIDLAEMELR Unmodified 1865.8023 0.80229433 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 3 0 1 78.766 78.766 3 0.0026839 29834 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.926 34.566 9.4375 8.4424 29.742 0 0 9.594 9 9 28 0 0 9 1 1 1 0 0 1 854.07 3642 928 3523 8521 9830 9830 1 DTELAEELLQWFLQEEK Unmodified 2120.0314 0.031366293 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10 3 1 1 114.16 114.16 3 1.3798E-12 44808 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.19 96.295 4.2666 16.736 0 6.489 3.6699 22.281 4 16 0 6 4 21 1 2 0 1 1 2 3937.4 3643 2185 3524 8522;8523 9831;9832 9832 2 DTELGEKPLPADASEQGR Unmodified 1911.9174 0.91739917 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 3.5 0.5 1 1 49.434 49.434 3 0.00019413 15988 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.102 47.061 29.702 85.871 26.199 109.11 43.248 47.802 28 83 28 102 46 46 1 2 1 2 1 1 10231 3644 510 3525 8524;8525 9833;9834 9834 2 DTENHISHGDGR Unmodified 1336.5756 0.57560436 351 Q03141;A0A1Y7VNZ6;A0A1Y7VJB1 Mark3 MAP/microtubule affinity-regulating kinase 3 yes no 0 0 0 0 1 0 1 19.714 19.714 4 0.00048161 2969 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.408 45.301 0 25.536 0 0 14.789 26.228 0 24 0 0 15 25 0 1 0 0 1 1 1214.9 3645 351 3526 8526 9835 9835 1 DTEPGPTGGGTVGSSGEEVPR Unmodified 1984.8974 0.89739201 2229 Q6P9S0;F7D291;D3YWC9 Mtss1l MTSS1-like protein yes no 0 0 0 0 1.5 0.5 1 1 43.506 43.506 3 2.9102E-11 12289 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.733 81.967 20.292 18.848 0 9 0 9.594 19 19 0 9 0 9 1 1 0 1 0 1 11965 3646 2229 3527 8527;8528 9836;9837 9836 2 DTEQVDNWMSK Unmodified 1351.5714 0.57143018 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.25 0.829 1 1 2 60.935 60.935 2;3 1.6788E-08 21173 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.71 88.003 227.23 134.09 108.45 246 149.58 97.445 213 139 111 232 157 93 4 3 2 3 3 1 29163 3647 551 3528 8529;8530;8531;8532 9838;9839;9840;9841 9839 4 DTFAATASQLHSNVVNYVQQILAPK Unmodified 2714.4028 0.40277894 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 1 0 1 91.537 91.537 4 6.3599E-08 32488 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.356 45.341 0 0 15.148 0 0 9.594 0 0 14 0 0 9 0 0 1 0 0 1 1021.4 3648 2686 3529 8533 9842 9842 1 DTFNHLTTWLEDAR Unmodified 1717.806 0.80599822 1617 P53994 Rab2a Ras-related protein Rab-2A yes yes 0 0 0 0 6 0 1 73.948 73.948 3 0.023367 26683 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.187 20.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3649 1617 3530 8534 9843 9843 1 DTGAGSIR Unmodified 775.38243 0.38243085 827 E9PV44 Atpif1 yes yes 0 0 0 0 3.5 0.5 1 1 28.515 28.515 2 0.011829 6637 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.853 34.676 59.864 69.16 37.646 46.82 64.548 86.636 56 65 37 46 65 83 1 1 1 1 1 2 26291 3650 827 3531 8535;8536 9844;9845 9844 2 DTGILDSIGR Unmodified 1045.5404 0.54038805 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 6.29 3.45 1 1 1 1 1 1 1 59.73 59.73 2 1.5486E-08 21143 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.52 66.07 7026.7 6876.5 5927.8 4387.9 13949 10942 6613 6967 6069 4575 13863 10631 9 6 8 9 7 9 2605900 3651 991;1305 3532 8537;8538;8539;8540;8541;8542;8543 9846;9847;9848;9849;9850;9851;9852;9853;9854;9855;9856 9855 11 DTGNIGQER Unmodified 988.45739 0.4573867 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 30.328 30.328 2 0.00018232 7230 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 131.22 50.437 1437.8 1226.1 1366 1457.8 1612.5 1651.6 1353 1264 1387 1436 1652 1590 7 7 7 8 7 7 198910 3652 2148 3533 8544;8545;8546;8547 9857;9858;9859;9860;9861;9862;9863;9864 9858 8 DTGTDTTAPR Unmodified 1033.4676 0.46761704 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 3.83 4.14 1 3 1 1 26.997 26.997 2;3 9.2929E-22 5283 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 187.82 129.53 653.66 518.01 738.5 471.19 952.09 633.29 615 535 729 481 945 615 5 9 6 6 5 6 160010 3653 2295 3534 8548;8549;8550;8551;8552;8553 9865;9866;9867;9868;9869;9870;9871;9872;9873;9874 9866 10 DTHALEQALDFVR Unmodified 1513.7525 0.75250609 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 5 0 1 71.59 71.59 3 0.00010419 26178 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.467 47.201 20.244 28.427 0 0 8.3971 29.608 19 28 0 0 9 28 1 1 0 0 1 1 2761.9 3654 1903 3535 8554 9875 9875 1 DTHDQLSEPSEVR Unmodified 1511.6852 0.68521439 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1 0 1 35.74 35.74 3 3.252E-34 9426 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 187.62 148.23 39.257 45.698 35.826 28.469 0 0 37 46 37 28 0 0 1 1 1 1 0 0 28293 3655 3266 3536 8555 9876 9876 1 DTIADPHNLK Unmodified 1122.5669 0.56693715 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 5 0 1 45.42 45.42 3 0.0077439 13720 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.539 32.854 0 0 114.69 121.59 145.65 134.42 0 0 111 120 149 130 0 0 1 1 1 1 7092 3656 165 3537 8556 9877 9877 1 DTILHDNLK Unmodified 1067.5611 0.56112349 1465 P27601 Gna13 Guanine nucleotide-binding protein subunit alpha-13 yes yes 0 0 0 0 5 0 1 49.265 49.265 3 0.0086083 15635 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.916 34.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3657 1465 3538 8557 9878 9878 1 DTILQLNLK Unmodified 1056.6179 0.61791009 1428;1427 P21279;P21278 Gnaq;Gna11 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-11 no no 0 0 0 0 8.5 0.5 1 1 71.83 71.83 3 0.0002247 24113 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.52 40.296 97.987 44.244 84.986 43.103 112.19 125.78 92 46 83 46 111 121 2 1 1 1 1 2 47504 3658 1428;1427 3539 8558;8559 9879;9880 9879 2 DTIQQVSQR Unmodified 1073.5465 0.54653606 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 7.33 4.03 1 1 1 37.032 37.032 2 0.00062614 9837 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.76 60.286 216.72 147.14 307.64 230.83 176.59 183.9 204 148 297 231 185 176 2 2 2 3 3 2 35698 3659 2028 3540 8560;8561;8562 9881;9882;9883 9883 3 DTLDECGLR Unmodified 1077.4761 0.47607323 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 3 0.816 1 1 1 45.456 45.456 2;3 0.010871 14096 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.301 41.409 69.119 144.53 110.65 75.642 100.58 154.9 65 139 111 74 102 148 2 3 3 2 2 3 17251 3660 570 3541 8563;8564;8565 9884;9885;9886;9887 9886 4 DTLEISDFFR Unmodified 1241.5928 0.59281755 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 10 3 1 1 81.494 81.494 2 0.0049188 31524 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.85 49.261 29.635 104.7 109.4 95.874 126.92 105.11 28 102 111 93 129 102 1 2 2 1 2 2 12370 3661 2629 3542 8566;8567 9888;9889 9889 2 DTLPGLR Unmodified 770.42865 0.42865276 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 8 3.56 1 1 1 49.115 49.115 2 0.014392 15781 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.59 0 946.12 734.64 865.14 849.84 757.68 1065.4 890 764 870 830 791 1017 4 4 3 3 3 3 280390 3662 118;1534 3543 8568;8569;8570 9890;9891;9892;9893 9891 4 DTLQSELVGQLYK Unmodified 1492.7773 0.77732386 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 5.5 0.5 1 1 74.377 74.377 3 1.4271E-16 26840 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.51 118.52 127.84 88.998 79.771 115.23 71.256 106.7 120 93 84 111 74 102 2 2 2 2 1 2 18588 3663 815;2590 3544 8571;8572 9894;9895 9895 2 DTLYEAVR Unmodified 965.48181 0.48181054 1613 P53026;Q5XJF6;D6RE43 Rpl10a 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 0 4.5 0.5 1 1 49.758 49.758 2 0.019852 16225 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.334 22.324 69.108 0 107.14 64.66 0 69.29 65 0 102 65 0 65 2 0 2 2 0 1 14172 3664 1613 3545 8573;8574 9896;9897 9896 2 DTNGENIAESLVAEGLATR Deamidation (N) 1959.9385 0.93852854 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 1 0 0 3 0 2 82.636 82.636 3 3.6205E-27 31023 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 150.23 127.22 9.657 0 0 6.4516 5.6557 9.4326 9 0 0 6 6 9 1 0 0 1 1 1 4822.5 3665 2276 3546 8575;8576 9898;9899 9899 900 2 DTNGENIAESLVAEGLATR Unmodified 1958.9545 0.95451296 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 4 0 1 79.422 79.422 3 5.4793E-05 29651 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.72 33.396 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1722.7 3666 2276 3546 8577 9900 9900 1 DTNLGQPVIQQFEQDGR Unmodified 1943.9337 0.93371793 104 A0A0G2JGS5;A0A0R4J088;P20352 F3 Tissue factor yes no 0 0 0 0 4 0 1 67.694 67.694 3 3.0263E-06 24299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.519 46.87 14.784 0 39.959 0 0 0 14 0 37 0 0 0 1 0 1 0 0 0 4284.6 3667 104 3547 8578 9901 9901 1 DTPALFNFTTQELSSNPPLATILIPPHAR Unmodified 3160.6557 0.65569917 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 0 8.5 0.5 1 1 93.689 93.689 4 2.6844E-05 33981 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.622 30.944 29.944 19.861 0 9.837 0 9 28 19 0 9 0 9 2 1 0 1 0 1 5848 3668 947 3548 8579;8580 9902;9903;9904 9902 3 DTPENNPDTPFDFTPENYK Unmodified 2239.9546 0.95457253 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 0 4 0.816 1 1 1 71.671 71.671 3 2.1887E-08 26105 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.85 87.197 89.679 0 76.164 77.488 37.018 98.082 84 0 74 74 37 93 3 0 3 1 2 3 26361 3669 3074 3549 8581;8582;8583 9905;9906;9907 9906 3 DTPENNPDTPFDFTPENYK Deamidation (N) 2240.9386 0.93858812 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 1 0 0 13 0 1 71.329 71.329 3 7.9066E-07 26637 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.55 66.758 20.387 0 0 19.879 47.203 0 19 0 0 19 46 0 1 0 0 1 1 0 8477.4 3670 3074 3549 8584 9908 9908 1067 1 DTPENNPDTPFDFTPENYKR Unmodified 2396.0557 0.055683563 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 1 4.5 0.5 2 2 63.322 63.322 3;4 1.3693E-16 22406 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.76 106.47 136.42 112.46 0 71.045 66.005 136.7 130 112 0 65 65 130 3 3 0 2 1 3 36280 3671 3074 3550 8585;8586;8587;8588 9909;9910;9911;9912 9909 4 DTPQELEQTR Unmodified 1215.5731 0.57314474 3064 Q9D4H8 Cul2 Cullin-2 yes yes 0 0 0 0 1.5 0.5 1 1 40.798 40.798 2 6.0468E-05 12180 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.31 70.501 0 48.351 35.455 37.67 53.956 58.699 0 46 37 37 56 56 0 1 1 1 2 1 17023 3672 3064 3551 8589;8590 9913;9914 9914 2 DTPTQEDWLVSVLPEGSR Unmodified 2027.98 0.97999942 1967 Q3UE92;Q6P1B1;S4R1I3;S4R228 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 4 0 1 81.083 81.083 3 8.0057E-05 30522 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.693 38.953 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 3236.6 3673 1967 3552 8591 9915 9915 1 DTQAEKQEQAAAPGPAATK Unmodified 1910.9334 0.93338358 3227 Q9JKC6 Cend1 Cell cycle exit and neuronal differentiation protein 1 yes yes 0 0 0 1 8.5 4.5 1 1 40.146 40.146 4 9.3525E-08 11856 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.269 67.585 217.83 160.42 154.25 177.07 131.28 279.05 204 167 148 162 129 264 2 3 2 2 2 3 23020 3674 3227 3553 8592;8593 9916;9917;9918;9919 9918 4 DTQISSR Unmodified 805.393 0.39299553 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 1 26.765 26.765 2 0.0381 5027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.809 19.101 20.319 13.526 0 14.96 18.18 29.329 19 14 0 14 19 28 1 1 0 1 1 1 4352.1 3675 20;2354 3554 8594 9920 9920 1 DTQLITVDEK Unmodified 1160.5925 0.5924832 976 Q9CXZ1;E9QPX3;A0A338P7A0 Ndufs4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 56.969 56.969 2;3 3.2857E-05 19648 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.01 62.489 221.56 238.69 167.23 283.99 378.09 306.63 208 241 176 274 384 297 3 4 2 3 4 3 40535 3676 976 3555 8595;8596;8597;8598 9921;9922;9923;9924 9921 4 DTQLQQIVDK Unmodified 1186.6194 0.61936665 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 7.86 3.4 1 1 1 2 2 59.56 59.56 2;3 3.8996E-09 20618 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.48 104.63 601.85 555.07 328.57 387.34 331.81 542.93 565 559 325 372 334 517 8 7 4 7 4 6 243810 3677 2164 3556 8599;8600;8601;8602;8603;8604;8605 9925;9926;9927;9928;9929;9930;9931;9932;9933 9926 9 DTSEDVEELVEPVAAHGPK Unmodified 2020.9589 0.95892963 1943 Q3TXS7;J3QN38 Psmd1;Gm21972 26S proteasome non-ATPase regulatory subunit 1 yes no 0 0 0 0 2.5 0.5 1 1 65.403 65.403 4 1.3077E-07 23596 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.484 73.893 60.088 28.695 65.648 106.41 70.83 49.098 56 28 65 102 74 47 2 1 1 2 3 2 16166 3678 1943 3557 8606;8607 9934;9935;9936 9935 3 DTSLETR Unmodified 820.39266 0.39266118 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 2.5 0.5 1 1 31.81 31.81 2 6.6527E-06 7885 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 166.86 74.182 177.45 141.33 173.07 179.39 141.56 0 167 139 176 176 139 0 2 1 2 2 1 0 23758 3679 2977 3558 8608;8609 9937;9938 9937 2 DTSNVVR Unmodified 789.39808 0.39808091 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 4.5 0.5 1 1 28.899 28.899 2 0.0058298 6393 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.55 87.583 245.5 268.96 169.12 61.208 0 0 231 271 169 56 0 0 2 2 1 1 0 0 42488 3680 1986 3559 8610;8611 9939;9940 9939 2 DTSQEPCGR Unmodified 1048.4244 0.42437202 3450;8 A0A087WNU5;S4R162;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5 Ank3 Ankyrin-3 no no 0 0 0 0 1 0 1 23.854 23.854 2 3.2683E-06 4064 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 158.37 106.94 44.91 31.02 0 0 37.567 33.04 42 32 0 0 37 32 1 1 0 0 1 1 4632.5 3681 8;3450 3560 8612 9941 9941 1 DTSTIGQER Unmodified 1005.4727 0.47270242 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0 1 31.568 31.568 2 0.0063759 7662 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.455 46.377 0 48.944 0 49.973 16.24 38.979 0 46 0 46 19 37 0 1 0 1 1 1 12730 3682 2186 3561 8613 9942 9942 1 DTSVEDALER Unmodified 1133.52 0.52004654 2906 Q9CQ06 Mrpl24 39S ribosomal protein L24, mitochondrial yes yes 0 0 0 0 1 0 1 49.958 49.958 2 0.0007949 14903 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.409 57.985 39.389 16.924 38.028 17.788 37.885 0 37 19 37 19 37 0 1 1 1 1 1 0 2603.9 3683 2906 3562 8614 9943 9943 1 DTSYLFITGPEVVK Unmodified 1567.8134 0.81337501 2873 Q99MN9;D3YZC1 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 6 0 1 78.594 78.594 3 4.0114E-05 28794 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.678 53.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3684 2873 3563 8615 9944 9944 1 DTTASAVAVGLR Unmodified 1159.6197 0.619701 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 5 0 1 50.544 50.544 2 0.011606 16235 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.721 28.606 48.474 64.318 94.093 54.545 56.07 0 46 65 93 56 56 0 1 1 1 1 1 0 5394.5 3685 2435 3564 8616 9945 9945 1 DTTEDSITEDDKR Unmodified 1523.6587 0.65872487 320 A0A1W2P6X0;P0C913 Overexpressed in colon carcinoma 1 protein homolog yes no 0 0 0 1 1 0 1 38.73 38.73 3 0.00021033 10617 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.781 58.097 49.273 16.894 0 0 0 49.036 46 19 0 0 0 46 1 1 0 0 0 1 2616.2 3686 320 3565 8617 9946 9946 1 DTTIASLEETNR Unmodified 1348.647 0.64703797 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 8 5 1 1 51.953 51.953 2 0.0021327 17558 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.385 31.971 0 38.738 37.71 0 19.874 0 0 37 37 0 19 0 0 1 1 0 1 0 4287.4 3687 347 3566 8618;8619 9947;9948 9947 2 DTTINEIEDTFR Deamidation (N) 1453.6573 0.6572683 3042 Q9D1K2 Atp6v1f V-type proton ATPase subunit F yes yes 0 1 0 0 2 0 1 61.901 61.901 2 1.9102E-05 21643 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 106.62 69.925 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 2112.4 3688 3042 3567 8620 9949 9949 1062 1 DTTINEIEDTFR Unmodified 1452.6733 0.67325272 3042 Q9D1K2 Atp6v1f V-type proton ATPase subunit F yes yes 0 0 0 0 3 0.816 1 1 1 71.365 71.365 2 2.1095E-72 26471 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 219.33 175.89 59.76 119.86 99.506 0 169.43 165.73 56 118 95 0 167 160 1 3 2 0 2 3 66809 3689 3042 3567 8621;8622;8623 9950;9951;9952 9951 3 DTTLEPYADPYYDYEIER Unmodified 2251.9797 0.97972465 1074 G3X8T2;H3BIW0;Q0P678 Zc3h18 Zinc finger CCCH domain-containing protein 18 yes no 0 0 0 0 2 0 1 72.842 72.842 3 0.0032111 26437 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 43.794 38.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3690 1074 3568 8624 9953 9953 1 DTTQEPCGR Unmodified 1062.44 0.44002208 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R1B7;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 5.33 5.44 1 1 1 24.945 24.945 2 1.6852E-12 4449 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 177.3 136.28 85.044 94.886 100.15 100.82 162.15 90.237 80 96 101 100 162 88 2 4 4 4 3 1 54725 3691 3449;3451 3569 8625;8626;8627 9954;9955;9956;9957;9958 9954 5 DTTVTGLGR Unmodified 918.47706 0.47705951 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 5 0 1 41.32 41.32 2 0.0061595 11784 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.163 24.442 157.91 0 149.6 0 121.25 124.46 148 0 139 0 120 120 1 0 1 0 1 1 11283 3692 2435 3570 8628 9959 9959 1 DTVDSAGTSPTAVLAAGEDAGAGR Unmodified 2188.0244 0.024383435 3132 Q9DBS2;B1AX95 Tprg1l;Tprgl Tumor protein p63-regulated gene 1-like protein yes no 0 0 0 0 2.5 0.5 1 1 61.852 61.852 3 6.936E-07 22115 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.766 46.57 0 20.073 18.272 0 9.414 9.594 0 19 18 0 9 9 0 1 2 0 1 1 2599.7 3693 3132 3571 8629;8630 9960;9961 9961 2 DTVDSAGTSPTAVLAAGEDAGAGRPGAGTPLR Unmodified 2937.4428 0.44280586 3132 Q9DBS2;B1AX95 Tprg1l;Tprgl Tumor protein p63-regulated gene 1-like protein yes no 0 0 0 1 4 0 1 61.327 61.327 3 4.2464E-14 21559 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.138 46.116 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 4104.2 3694 3132 3572 8631 9962 9962 1 DTVLLEELGQASGLVLER Unmodified 1941.0419 0.0418714 1109 G5E8X1;Q9DCS2;E9Q5B2 0610011F06Rik UPF0585 protein C16orf13 homolog yes no 0 0 0 0 5.5 0.5 1 1 94.825 94.825 3 3.1284E-07 35331 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.829 67.029 0 9.576 0 0 6 9.594 0 9 0 0 6 9 0 1 0 0 1 1 4226 3695 1109 3573 8632;8633 9963;9964 9963 2 DTVLSALSR Unmodified 960.52401 0.52400971 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 8 0 1 58.82 58.82 2 0.031992 18059 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.153 27.85 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3696 3327 3574 8634 9965 9965 1 DTYALEQSLEFVR Unmodified 1569.7675 0.76748745 3283 Q9QYS2 Grm3 Metabotropic glutamate receptor 3 yes yes 0 0 0 0 5 0 1 75.811 75.811 2 0.0067068 28111 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.57 32.241 0 20.216 0 0 28.291 29.041 0 19 0 0 28 28 0 1 0 0 1 1 2575.6 3697 3283 3575 8635 9966 9966 1 DTYALEQSLTFVQALIQK Unmodified 2067.0888 0.088821592 1101 Q68ED2;G5E8D5;G3UZU3 Grm7 Metabotropic glutamate receptor 7 yes no 0 0 0 0 10 0 1 107.6 107.6 3 1.2818E-29 33892 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.7 86.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3698 1101 3576 8636 9967 9967 1 DTYEGSR Unmodified 826.34571 0.34571099 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 2 0.816 1 1 1 25.01 25.01 2 6.6527E-06 5012 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 166.86 105.36 160.64 265.4 212.72 155.93 451.31 264.61 151 260 213 160 447 257 2 3 3 3 4 3 89292 3699 2886 3577 8637;8638;8639 9968;9969;9970;9971 9970 4 DTYGDDPVSNQNIQYFLDR Deamidation (N) 2259.992 0.99202067 3224 Q9JK42 Pdk2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 0 1 0 0 4 0 1 75.042 75.042 3 4.9898E-08 27666 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.511 69.723 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 3146.2 3700 3224 3578 8640 9972 9972 1109 1 DTYTCPTEEEYK Unmodified 1534.6134 0.61335458 337 A0A1Y7VJZ1;Q9CZZ6;Q9WTN0;A0A1Y7VLK7;A0A1Y7VNC9 Ggps1 Geranylgeranyl pyrophosphate synthase yes no 0 0 0 0 2 0 1 49.256 49.256 3 0.055346 15819 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 35.204 13.953 9.4447 19.256 19.355 0 38.702 0 9 19 19 0 37 0 1 1 1 0 1 0 2168.3 3701 337 3579 8641 9973 9973 1 DVAEEITNYRPTIDTLHEQASALPQAHAESPDVK Unmodified 3744.8231 0.82311144 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 4 0 1 66.311 66.311 5 0.012182 23815 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 25.222 15.075 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 5143.8 3702 2148 3580 8642 9974 9974 1 DVAGDASESALLK Unmodified 1274.6354 0.63541065 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 6.33 3.65 1 3 2 1 2 59.019 59.019 2;3 7.5217E-73 19657 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 218.15 139.63 1034.4 705.86 1084.8 1045.5 915.85 917.49 973 718 1082 1019 919 875 10 6 8 9 7 6 744690 3703 106 3581 8643;8644;8645;8646;8647;8648;8649;8650;8651 9975;9976;9977;9978;9979;9980;9981;9982;9983;9984;9985;9986 9983 12 DVAGDIFHQQCK Unmodified 1416.6456 0.64559818 1869 Q00612;A3KG36 G6pdx Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 0 6 0 1 53.567 53.567 3 0.0052485 17042 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.013 35.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3704 1869 3582 8652 9987 9987 1 DVAGPQSESDLEESGPAAEWSGDGSGSLR Unmodified 2889.2537 0.25366768 717 Q91YS4;D3YXZ3;O88448 Klc2 Kinesin light chain 2 yes no 0 0 0 0 3 0 1 65.135 65.135 3 6.9023E-10 23553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.311 42.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3705 717 3583 8653 9988 9988 1 DVAIKEPLVDVVDPK Unmodified 1635.9083 0.90833803 244 A0A171KXD3;Q9JIF0;A0A140LHF7 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 1 5 0 1 70.824 70.824 3 0.015096 25762 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.458 16.482 48.757 55.394 54.001 67.827 0 50.102 46 56 56 65 0 47 1 1 1 1 0 1 3306.4 3706 244 3584 8654 9989 9989 1 DVAPQAPVHFLVIPR Unmodified 1657.9304 0.93041088 3033 Q9D0S9 Hint2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 0 0 0 0 10.5 2.5 1 1 66.813 66.813 3 2.2589E-22 21941 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.14 112.64 49.128 45.631 0 49.042 124.31 0 46 46 0 46 121 0 1 1 0 1 2 0 16948 3707 3033 3585 8655;8656 9990;9991 9990 2 DVAQIFNNILR Unmodified 1301.7092 0.70918471 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 9.8 0.748 2 2 1 85.695 85.695 2;3 8.4495E-13 27410 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 144.28 90.525 39.561 27.776 45.444 0 41.563 38.525 37 28 42 0 41 37 2 1 1 0 2 1 22090 3708 1888 3586 8657;8658;8659;8660;8661 9992;9993;9994;9995;9996 9995 5 DVATFLR Unmodified 820.4443 0.44430282 3030 Q9D0M3 Cyc1 Cytochrome c1, heme protein, mitochondrial yes yes 0 0 0 0 6 0 1 59.654 59.654 2 0.030721 19943 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.462 17.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3709 3030 3587 8662 9997 9997 1 DVATSPISPTENNTTPPDALTR Deamidation (N) 2297.1023 0.1022994 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 1 0 0 3 0 1 60.468 60.468 3 9.4867E-12 21535 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.575 67.435 12.876 0 0 0 14.219 12.386 12 0 0 0 14 12 1 0 0 0 1 1 3795.2 3710 1099 3588 8663 9998 9998 290 1 DVATVAFCDAQSTQEIHEK Unmodified 2147.9793 0.9793475 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YUR5;A0A0J9YVI3;A0A0J9YU66 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 4.5 0.5 1 1 59.376 59.376 3;4 5.4446E-08 20686 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.88 96.169 39.357 48.16 104.76 56.579 62.743 77.094 37 46 102 56 65 74 1 1 2 1 1 1 12027 3711 114 3589 8664;8665 9999;10000 9999 2 DVAVDTVK Unmodified 845.44945 0.44944778 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 5 0.816 1 1 1 48.437 48.437 2;3 0.0022109 15528 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.114 28.862 296.94 160.85 90.721 266.81 54.908 217.46 278 167 93 250 56 204 3 2 1 3 1 2 22062 3712 927 3590 8666;8667;8668 10001;10002;10003 10001 3 DVAWAPSIGLPTSTIASCSQDGR Unmodified 2388.138 0.1379734 3043 Q9D1M0 Sec13 Protein SEC13 homolog yes yes 0 0 0 0 9.5 3.5 1 1 78.166 78.166 3 1.0021E-06 28655 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.015 41.708 0 0 38.774 28.293 8.727 20.005 0 0 37 28 9 19 0 0 1 1 1 1 6681.8 3713 3043 3591 8669;8670 10004;10005 10004 2 DVAWLGDCDQGCLALADLLGWK Unmodified 2475.1563 0.15626601 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 7.5 0.5 1 1 105.65 105.65 4 5.936E-12 36541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.122 59.701 14.93 5.9422 10.388 0 6.276 10.66 14 6 10 0 6 10 2 1 2 0 1 1 2954.3 3714 2702 3592 8671;8672 10006;10007 10007 2 DVAYQYVK Unmodified 984.49165 0.49164694 2649 Q9CYR0;Q8R2K3 Ssbp1 Single-stranded DNA-binding protein, mitochondrial;Single-stranded DNA-binding protein yes no 0 0 0 0 6 0 1 53.404 53.404 2 0.011224 16957 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.302 51.276 29.856 37.355 0 0 67.99 0 28 37 0 0 65 0 1 1 0 0 1 0 3245.9 3715 2649 3593 8673 10008 10008 1 DVDCAYLR Unmodified 1010.4491 0.4491302 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Krt86;5430421N21Rik;Krt81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 no no 0 0 0 0 13 0 1 47.197 47.197 2 0.01246 14977 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.296 57.341 39.701 0 0 0 106.69 0 37 0 0 0 102 0 1 0 0 0 1 0 9422 + 3716 648 3594 8674 10009 10009 1 DVDDFFEHER Unmodified 1307.5418 0.54184461 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 3 0.816 1 1 1 56.943 56.943 3 9.8049E-08 19816 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.02 108.69 79.962 65.434 66.205 47.811 83.002 97.874 75 66 66 47 84 93 3 3 3 2 3 3 12312 3717 2225 3595 8675;8676;8677 10010;10011;10012;10013 10011 4 DVDEIEAWISEK Unmodified 1432.6722 0.67219008 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.14 3.76 2 2 1 2 86.195 86.195 2;3 1.8899E-14 32915 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.5 94.258 108.76 177.88 246.09 295.96 256.8 205.08 103 172 246 287 260 195 4 4 5 6 5 4 165280 3718 551 3596 8678;8679;8680;8681;8682;8683;8684 10014;10015;10016;10017;10018;10019;10020;10021 10017 8 DVDETIGWIK Unmodified 1174.587 0.58700389 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 72.289 72.289 3 1.1497E-05 25942 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.29 73.638 59.862 270.92 37.067 226.14 372.81 29.848 56 259 37 214 365 28 1 3 1 3 3 1 106030 3719 551 3597 8685;8686;8687;8688 10022;10023;10024;10025 10023 4 DVDEVSSLLR Unmodified 1131.5772 0.57716749 1543 P42932;H3BLL1;H3BKG2 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7 3.54 1 1 1 1 66.334 66.334 2 5.5769E-07 23807 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.28 71.476 276.85 53.81 311.71 269.7 118.96 283.36 260 56 300 259 121 269 4 1 3 2 2 3 43879 3720 1543 3598 8689;8690;8691;8692 10026;10027;10028;10029;10030 10026 5 DVDFELIK Unmodified 977.50696 0.50696266 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 8 3.56 1 1 1 72.008 72.008 2 0.0063571 25770 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.21 23.204 286.07 171.56 106.06 353.77 264.52 262.39 268 176 111 334 269 250 3 2 1 3 2 2 30447 3721 1825 3599 8693;8694;8695 10031;10032;10033 10032 3 DVDGATLAR Unmodified 916.46141 0.46140945 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 3.5 0.5 1 1 41.113 41.113 2 4.5654E-08 12471 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 163.2 71.42 118.06 103.21 280.22 64.359 56.948 150.81 111 107 277 65 56 143 1 2 3 1 1 2 189390 3722 1557 3600 8696;8697 10034;10035;10036 10034 3 DVDIDSYPDEELPCSAR Unmodified 1979.8419 0.84185096 3385 Q9Z1T2 Thbs4 Thrombospondin-4 yes yes 0 0 0 0 2 0 1 62.891 62.891 3 0.0015041 22166 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.113 38.512 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1715.4 3723 3385 3601 8698 10037 10037 1 DVDLEFLAK Unmodified 1048.5441 0.54407645 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 8.8 3.49 1 1 1 2 75.744 75.744 2;3 0.00097106 27490 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.98 34.338 167.84 221.09 309.6 218.16 239.87 220.21 158 222 306 213 241 213 3 4 4 4 3 4 57703 3724 1875 3602 8699;8700;8701;8702;8703 10038;10039;10040;10041;10042 10039 5 DVDYVCISDNYWLGK Deamidation (N) 1846.8084 0.80836599 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 1 0 0 6 0 1 81.093 81.093 3 0.00036439 29967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.533 46.694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3725 3038 3603 8704 10043 10043 1061 1 DVDYVCISDNYWLGK Unmodified 1845.8244 0.82435041 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 7 0 1 81.145 81.145 3 0.028734 29155 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.392 21.138 30.044 0 0 20.767 0 69.29 28 0 0 19 0 65 1 0 0 1 0 1 2253.3 3726 3038 3603 8705 10044 10044 1 DVEANTVR Unmodified 902.44576 0.44575938 516 A2ASW8;Q9EQZ6 Rapgef4 Rap guanine nucleotide exchange factor 4 yes no 0 0 0 0 2 0 1 32.815 32.815 2 0.015342 8354 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.783 48.851 39.406 0 49.573 0 0 78.884 37 0 46 0 0 74 1 0 1 0 0 1 5123.9 3727 516 3604 8706 10045 10045 1 DVEDEETWIR Unmodified 1290.5728 0.57281039 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.57 3.92 2 2 2 1 59.012 59.012 2;3 1.4022E-09 20494 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 159.79 110.08 316.18 312.08 290.3 292.71 460.67 540.11 297 316 287 287 471 519 5 5 4 5 7 7 575680 3728 551 3605 8707;8708;8709;8710;8711;8712;8713 10046;10047;10048;10049;10050;10051;10052 10049 7 DVEDEILWVGER Unmodified 1458.6991 0.69907354 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6 4.47 1 2 2 2 76.195 76.195 2;3 5.1347E-24 28870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 170.52 88.656 226.71 184.32 309.92 284.34 233.73 289.68 213 190 306 278 241 278 3 3 4 5 3 4 161360 3729 2148 3606 8714;8715;8716;8717;8718;8719;8720 10053;10054;10055;10056;10057;10058;10059 10055 7 DVEDEILWVTER Unmodified 1502.7253 0.72528829 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 4.05 1 2 1 1 82.316 82.316 2;3 7.5258E-21 30847 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 160.18 119.46 64.245 8.9279 15.073 0 67.99 38.848 60 9 14 0 65 37 4 1 1 0 2 3 33012 3730 2186 3607 8721;8722;8723;8724;8725 10060;10061;10062;10063;10064;10065 10062 6 DVEDGAFLLR Unmodified 1133.5717 0.57168818 504 D3Z781;E9QAU4;A2AQ25 Etl4;Skt Sickle tail protein yes no 0 0 0 0 5 0 1 67.05 67.05 2 0.012042 23966 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.823 34.618 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3731 504 3608 8726 10066 10066 1 DVEEFLSPLLGK Unmodified 1345.7129 0.71293269 2909 Q9CQ40 Mrpl49 39S ribosomal protein L49, mitochondrial yes yes 0 0 0 0 8 0 1 92.187 92.187 3 0.00059031 33459 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.55 39.333 9.657 0 0 9.837 0 0 9 0 0 9 0 0 1 0 0 1 0 0 1431.2 3732 2909 3609 8727 10067 10067 1 DVEFLAQLK Unmodified 1061.5757 0.57571092 2334;1244 O70172;F6RJE8;Q80XI4 Pip4k2a;Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 0 8.5 2.69 1 1 1 1 75.056 75.056 2 1.4866E-05 26296 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 149.94 89.347 138.34 120.98 316.12 133.11 210.12 270.1 130 120 305 130 213 259 2 2 4 1 2 3 27453 3733 1244;2334 3610 8728;8729;8730;8731 10068;10069;10070;10071 10069 4 DVEFLVQLK Unmodified 1089.607 0.60701105 2768 Q91XU3 Pip4k2c Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 0 7.5 0.5 1 1 78.981 78.981 3 0.0024022 28175 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.735 27.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3734 2768 3611 8732;8733 10072;10073 10072 2 DVEMGNSVIEENEMK Unmodified 1722.7441 0.74405117 1643 P56564 Slc1a3 Excitatory amino acid transporter 1 yes yes 0 0 0 0 3 0 1 62.205 62.205 3 6.7224E-08 22211 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.65 95.242 59.744 25.153 36.519 38.264 0 49.036 56 28 37 37 0 46 1 1 1 1 0 1 7212.5 3735 1643 3612 8734 10074 10074 1 DVEMGNSVIEENEMK Deamidation (N) 1723.7281 0.72806676 1643 P56564 Slc1a3 Excitatory amino acid transporter 1 yes yes 0 1 0 0 3 0 1 64.865 64.865 3 0.0017093 23419 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.104 50.664 29.856 37.355 0 0 37.714 28.772 28 37 0 0 37 28 1 1 0 0 1 1 2144.3 3736 1643 3612 8735 10075 10075 630 1 DVEREDIEFICK Unmodified 1551.7239 0.72390808 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 1 3.5 0.5 1 1 60.319 60.319 3 2.1693E-15 21126 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142.12 102.46 117.61 78.351 185.14 0 46.807 146.84 111 84 176 0 46 139 2 2 2 0 1 2 13578 3737 1824 3613 8736;8737 10076;10077 10077 2 DVESDSAK Unmodified 849.37159 0.37159139 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 5 4.64 2 1 1 34.813 34.813 2;3 0.0030877 9687 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 124.98 70.002 89.136 269.54 122.99 122.59 432.07 199.35 84 259 130 121 425 195 3 3 2 2 4 2 19035 3738 1331 3614 8738;8739;8740;8741 10078;10079;10080;10081 10080 4 DVEVLEGKPIYVDCFGNLVPLTK Unmodified 2604.3509 0.35092629 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 7 1 1 1 85.777 85.777 4 4.0685E-05 30813 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.503 38.574 20.089 46.997 26.345 48.708 0 0 19 47 28 46 0 0 1 2 1 1 0 0 4874.1 3739 3449;3451 3615 8742;8743 10082;10083 10083 2 DVFAALGSPAPATGASGQASELAPSTADSAVPPAPAK Unmodified 3376.6787 0.67867903 74 A0A0A6YY91 Ncam1 yes yes 0 0 0 0 7 0 1 78.143 78.143 5 0.0096738 27733 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 24.676 13.365 29.568 0 79.919 0 46.807 38.106 28 0 74 0 46 37 1 0 1 0 1 1 3079 3740 74 3616 8744 10084 10084 1 DVFFYQADDEHYIPR Unmodified 1913.8584 0.85842773 1830 Q8VCK3;P83887 Tubg2;Tubg1 Tubulin gamma-2 chain;Tubulin gamma-1 chain yes no 0 0 0 0 5 0 1 66.926 66.926 3 0.00028403 23906 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.374 53.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3741 1830 3617 8745 10085 10085 1 DVFISAAER Unmodified 1006.5084 0.50835964 413 A0A338P7C0;O09061 Psmb1 Proteasome subunit beta type-1 yes no 0 0 0 0 8 3.56 1 1 1 54.026 54.026 2 0.00056706 18056 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.44 82.893 177.82 213.81 108.48 254.82 113.08 157.77 167 213 112 241 111 148 2 2 2 3 1 2 35889 3742 413 3618 8746;8747;8748 10086;10087;10088 10086 3 DVFLGTFLYEYSR Unmodified 1608.7824 0.78240924 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 10.6 2.06 1 1 1 2 89.54 89.54 2;3 5.8185E-23 32455 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 163.46 114.72 103.01 111.56 86.173 169.85 102.53 29.848 97 111 84 163 102 28 4 3 2 4 3 1 60196 3743 1321 3619 8749;8750;8751;8752;8753 10089;10090;10091;10092;10093;10094 10089 6 DVFSPIGER Unmodified 1018.5084 0.50835964 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 5 0 1 57.43 57.43 2 0.0087874 19524 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.716 35.638 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3744 1899 3620 8754 10095 10095 1 DVGGIVLANACGPCIGQWDR Unmodified 2157.0095 0.0095421889 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 8 2.61 2 1 1 1 76.945 76.945 2;3;4 6.227E-31 29329 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.04 128.08 20.215 136.61 140.08 132 121.03 68.001 19 130 139 130 120 65 1 3 4 4 2 2 65257 3745 2843 3621 8755;8756;8757;8758;8759 10096;10097;10098;10099;10100 10100 5 DVGSLDEK Unmodified 861.40798 0.40797689 39 A0A0A0MQ90;P97352 S100a13 Protein S100-A13 yes no 0 0 0 0 3.67 0.471 1 2 47.865 47.865 2;3 0.0020958 15218 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.492 38.932 148.3 133.64 95.955 146.21 0 237.72 139 130 93 139 0 223 2 2 1 2 0 3 18566 3746 39 3622 8760;8761;8762 10101;10102;10103 10103 3 DVIDEPIIEEPSR Unmodified 1510.7515 0.75150304 2130 Q61550 Rad21 Double-strand-break repair protein rad21 homolog yes yes 0 0 0 0 1 0 1 62.988 62.988 2 0.0030412 21045 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.842 37.673 0 18 0 0 0 0 0 18 0 0 0 0 0 1 0 0 0 0 1322.8 3747 2130 3623 8763 10104 10104 1 DVIEEYFK Unmodified 1041.5019 0.50187728 1013 Q6ZWZ6;F7AEH4;A0A1W2P7A1;P63323 Rps12 40S ribosomal protein S12 yes no 0 0 0 0 5.5 0.5 1 1 72.129 72.129 2 0.0042012 25773 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.27 29.976 84.164 124.47 170.69 144.56 83 63.96 79 125 171 143 83 60 1 2 2 2 1 1 20971 3748 1013 3624 8764;8765 10105;10106 10106 2 DVIEPLFLLAEVEIPNIQK Unmodified 2179.214 0.21402211 2060 Q5SSM3 Arhgap44 Rho GTPase-activating protein 44 yes yes 0 0 0 0 7 0 1 109.68 109.68 4 3.8178E-05 37641 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.589 44.996 5.3408 0 4.0684 5.2225 0 4.264 5 0 4 5 0 4 1 0 1 1 0 1 775.23 3749 2060 3625 8766 10107 10107 1 DVIGWTSSDTSLK Unmodified 1407.6882 0.6881745 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 7 0 1 68.371 68.371 3 0.024444 23179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.477 16.096 39.474 0 38.157 37.667 26.559 29.09 37 0 37 37 28 28 1 0 1 1 1 1 2002.2 3750 2033 3626 8767 10108 10108 1 DVIIVDSGK Unmodified 944.51786 0.51786169 1444 P24369 Ppib Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 5.5 0.5 1 1 57.693 57.693 2 0.023657 18968 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.78 19.492 97.993 111.04 27.338 40.441 46.807 97.802 92 111 28 37 46 93 2 2 1 1 1 2 4933 3751 1444 3627 8768;8769 10109;10110 10110 2 DVILVGEQAK Unmodified 1070.5972 0.59717465 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 5.5 0.5 1 1 59.364 59.364 3 0.00074264 20474 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.841 36.485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3752 1036 3628 8770;8771 10111;10112 10111 2 DVIQALTQ Unmodified 886.476 0.47599688 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 8.67 3.09 1 1 1 72.276 72.276 2 0.014634 25856 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.064 48.043 20.195 47.582 47.209 57.539 120.57 67.147 19 46 46 56 120 65 1 2 1 1 3 2 16163 3753 3249 3629 8772;8773;8774 10113;10114;10115 10113 3 DVIVQDDDVDCTLVEK Unmodified 1861.8615 0.86152377 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 4.8 4.17 2 1 1 1 68.131 68.131 3;4 3.1415E-06 24414 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.31 84.081 248.52 161.58 169.39 203.38 151.42 205.19 233 167 167 195 153 195 4 4 3 4 4 5 67875 3754 1783 3630 8775;8776;8777;8778;8779 10116;10117;10118;10119;10120;10121;10122 10121 7 DVKPDEDLAGK Unmodified 1185.5877 0.58773217 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 1 4 0 1 48.807 48.807 3 0.0039084 15757 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.944 37.271 0 0 196.16 89.958 0 0 0 0 185 93 0 0 0 0 1 1 0 0 7110.3 3755 573 3631 8780 10123 10123 1 DVKPSNILVNSR Unmodified 1340.7412 0.74121312 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 1 7 0 1 50.018 50.018 3 0.00066709 14486 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.219 51.989 282.33 187.38 0 237.09 237.16 361 264 194 0 221 249 345 1 1 0 1 1 1 23709 3756 1500 3632 8781 10124 10124 1 DVLCGYLLCTNIGNIPR Unmodified 1976.9812 0.98120217 685 Q9R1V6;D3YUP9 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 9 0 1 82.269 82.269 3 0.00010392 28387 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.462 39.9 20.184 13.152 22.936 23.772 0 0 19 14 23 23 0 0 1 1 1 1 0 0 4779.7 3757 685 3633 8782 10125 10125 1 DVLEDIPR Unmodified 955.49746 0.4974606 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 3.5 0.5 1 1 60.823 60.823 2 0.010118 21337 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.458 50.589 15.829 14.348 76.36 37.833 28.181 32.242 15 15 73 37 28 31 1 1 2 1 1 1 12636 3758 1424 3634 8783;8784 10126;10127 10127 2 DVLEGYNGTIFAYGQTSSGK Deamidation (N) 2106.9746 0.9745797 1481;2139 P28738;Q61768;E9QAK5 Kif5c;Kif5b Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein no no 0 1 0 0 9.5 3.5 1 1 78.213 78.213 3 2.0541E-10 29984 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.063 67.908 48.87 75.274 73.626 37.705 35.321 48.028 46 75 74 37 37 46 1 2 2 1 1 1 7669.3 3759 1481;2139 3635 8785;8786 10128;10129 10129 550 2 DVLEGYNGTIFAYGQTSSGK Unmodified 2105.9906 0.99056411 1481;2139 P28738;Q61768;E9QAK5 Kif5c;Kif5b Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein no no 0 0 0 0 7 0 1 78.325 78.325 3 0.0022598 27859 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.172 25.293 20.019 27.802 38.265 0 27.631 48.248 19 28 37 0 28 46 1 1 1 0 1 1 2059.2 3760 1481;2139 3635 8787 10130 10130 1 DVLEPTQALAAGAVPILAK Unmodified 1876.067 0.066963938 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 7.5 0.5 1 1 86.034 86.034 3 4.6156E-05 30899 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.764 43.151 0 19.907 18.488 49.757 27.237 19.477 0 19 19 47 28 19 0 1 1 2 1 1 2566 3761 3322 3636 8788;8789 10131;10132 10132 2 DVLETLWGGPANLEAIAK Unmodified 1895.9993 0.9992783 3100 Q9D9V3 Echdc1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 0 13 0 1 94.029 94.029 3 0.00010495 37611 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.437 33.903 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 2540.3 3762 3100 3637 8790 10133 10133 1 DVLFPYIK Unmodified 993.55352 0.55351892 2374 Q8BGB7 Enoph1 Enolase-phosphatase E1 yes yes 0 0 0 0 9 0.816 1 1 1 77.782 77.782 2;3 0.027293 27047 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.607 25.684 119.01 17.545 0 111 26.001 29.106 111 19 0 102 28 28 2 1 0 2 1 1 18050 3763 2374 3638 8791;8792;8793 10134;10135;10136 10134 3 DVLGQAQGVLFDCDGVLWNGER Unmodified 2447.154 0.15395782 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 6 0 1 88.086 88.086 3 7.7128E-10 33177 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.614 53 9.612 8.9279 0 0 0 0 9 9 0 0 0 0 1 1 0 0 0 0 1894.1 3764 1670 3639 8794 10137 10137 1 DVLILGGGDGGILCEIVK Unmodified 1826.9812 0.9811854 1845 P97355;E9PZ58 Sms Spermine synthase yes no 0 0 0 0 6.5 0.5 1 1 91.8 91.8 3 0.00062378 34743 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.559 27.361 0 20.216 0 0 0 39.254 0 19 0 0 0 38 0 1 0 0 0 2 2446.2 3765 1845 3640 8795;8796 10138;10139 10138 2 DVLPQVLSVMAK Unmodified 1298.7268 0.72680861 1087 G3X9N3 Pnmal2 yes yes 0 0 0 0 10 0 1 84.843 84.843 3 0.021973 27057 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.095 26.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1306.9 3766 1087 3641 8797 10140 10140 1 DVLSNLIPK Unmodified 997.5808 0.5807963 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 10.5 1.5 1 1 2 2 1 1 74.243 74.243 2;3 5.2708E-06 24705 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 156.35 65.278 627.65 380.16 331.13 708.46 566.13 862.23 591 383 324 675 584 824 7 4 3 7 5 8 182670 3767 3011 3642 8798;8799;8800;8801;8802;8803;8804;8805 10141;10142;10143;10144;10145;10146;10147;10148;10149;10150;10151 10144 11 DVLSVAFSSDNR Unmodified 1308.631 0.63099397 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 8.5 2.69 1 1 1 1 66.364 66.364 2;3 1.3192E-11 22261 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.65 75.886 197.49 104.49 81.195 125.66 91.563 156.22 185 112 84 120 93 149 3 3 2 3 2 3 22454 3768 1792 3643 8806;8807;8808;8809 10152;10153;10154;10155 10153 4 DVLTGQEFDVR Unmodified 1277.6252 0.62518031 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 4 0 2 61.969 61.969 2;3 0.00073895 21863 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.937 60.443 30.044 0 0 49.77 27.002 9 28 0 0 46 28 9 1 0 0 1 1 1 4133.5 3769 2179 3644 8810;8811 10156;10157 10156 2 DVLVNIYSAYIDNFLNAK Unmodified 2071.0626 0.062606842 2311 Q80U35 Arhgef17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 0 11 0 1 106.67 106.67 3 5.0728E-05 35140 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.765 43.69 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 991.62 3770 2311 3645 8812 10158 10158 1 DVMICPDTSLEDAK Unmodified 1592.7062 0.7062091 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 4 0 1 66.331 66.331 2 0.0005037 23787 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.313 62.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3196.4 3771 2868 3646 8813 10159 10159 1 DVMPEVNR Unmodified 958.45422 0.45421558 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 3.5 0.5 1 1 45.359 45.359 2 0.0047675 14533 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.37 66.965 236.48 159.14 155.95 304.55 49.935 324.77 222 167 158 288 56 306 2 2 1 2 1 2 43270 3772 1316 3647 8814;8815 10160;10161 10160 2 DVMSDETNNEETESPSQEFVNITK Unmodified 2742.1814 0.18141394 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3 0 1 70.556 70.556 3 6.6474E-11 26076 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.704 61.9 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2597.4 3773 1382 3648 8816 10162 10162 1 DVNAAIAAIK Deamidation (N) 985.54441 0.5444108 44 A0A0A0MQA5;P68368 Tuba4a Tubulin alpha-4A chain yes no 0 1 0 0 5.5 0.5 1 1 65.181 65.181 2;3 0.0023679 21813 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.659 38.211 118.34 59.881 77.715 0 122.19 97.024 111 65 74 0 120 93 2 2 1 0 2 1 9532.8 3774 44 3649 8817;8818 10163;10164 10163 9 2 DVNAAIAAIK Unmodified 984.5604 0.56039521 44 A0A0A0MQA5;P68368 Tuba4a Tubulin alpha-4A chain yes no 0 0 0 0 8.78 2.2 2 1 1 2 1 1 1 65.339 65.339 2;3 3.5367E-11 21027 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 161.63 82.7 3259.6 2291.7 3669.5 3242.8 2718.7 3127.9 3069 2339 3665 3184 2782 2996 15 7 13 11 9 10 910720 3775 44 3649 8819;8820;8821;8822;8823;8824;8825;8826;8827 10165;10166;10167;10168;10169;10170;10171;10172;10173;10174;10175;10176;10177;10178;10179;10180 10170 16 DVNAAIATIK Unmodified 1014.571 0.5709599 1313;1794 P05213;P68369;P05214 Tuba1b;Tuba1a;Tuba3a Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 8.27 3.19 1 2 1 2 1 1 1 1 1 61.955 61.955 2;3 2.0319E-15 19590 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 175.41 110.11 6194.2 5111 7723.3 4712 8571.3 7359.8 5834 5292 7632 4739 8634 7129 13 14 15 9 13 14 3417100 3776 1313;1794 3650 8828;8829;8830;8831;8832;8833;8834;8835;8836;8837;8838 10181;10182;10183;10184;10185;10186;10187;10188;10189;10190;10191;10192;10193;10194;10195;10196;10197;10198 10189 18 DVNAAIATIK Deamidation (N) 1015.555 0.55497548 1313;1794 P05213;P68369;P05214 Tuba1b;Tuba1a;Tuba3a Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 1 0 0 5.8 0.98 3 2 61.199 61.199 2;3 0.00015693 22809 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.258 63.91 204.46 180.65 293.03 154.98 138.11 137.03 195 185 288 157 139 130 4 4 4 3 2 2 55720 3777 1313;1794 3650 8839;8840;8841;8842;8843 10199;10200;10201;10202;10203;10204 10202 380 6 DVNFEFPEFQL Unmodified 1383.6347 0.63468237 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 6 0.816 1 1 1 101.03 101.03 2 0.0019162 37319 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.456 62.156 9.5328 18.284 22.82 19.609 12.261 15.99 9 18 22 19 12 15 1 2 2 3 1 2 12128 3778 996 3651 8844;8845;8846 10205;10206;10207;10208 10206 4 DVNNFDQDFTR Unmodified 1369.5899 0.58985744 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 3 0 1 56.508 56.508 2 0.022233 19722 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.259 37.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3779 1388 3652 8847 10209 10209 1 DVNNFDQDFTREEPILTLVDEAIIK Unmodified 2933.4658 0.46583271 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 1 5 0 1 98.322 98.322 4 7.2911E-25 35805 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.08 79.365 12.742 8.4615 15.271 8.6983 12.152 0 12 9 15 9 12 0 1 1 1 1 1 0 1730.4 3780 1388 3653 8848 10210 10210 1 DVNQQEFVR Unmodified 1133.5465 0.54653606 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722;D3YUG3;S4R223 Rps19 40S ribosomal protein S19 yes no 0 0 0 0 3.5 0.5 1 1 44.26 44.26 2 0.0010011 13926 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.79 68.166 39.155 56.207 44.08 84.651 0 39.442 37 56 46 83 0 37 1 1 1 2 0 1 22788 3781 3013 3654 8849;8850 10211;10212 10211 2 DVNVAIAAIK Unmodified 1012.5917 0.59169534 3223 Q9JJZ2 Tuba8 Tubulin alpha-8 chain yes yes 0 0 0 0 8 0 1 66.746 66.746 2 0.017411 21763 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.398 33.261 69.079 33.312 83.64 85.734 0 59.696 65 37 83 83 0 56 1 1 1 1 0 1 2965.4 3782 3223 3655 8851 10213 10213 1 DVNVNFEK Unmodified 963.46616 0.46616048 3304 Q9R0Q7;D3Z7C6 Ptges3 Prostaglandin E synthase 3 yes no 0 0 0 0 5 0 1 56.001 56.001 3 0.011624 18816 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.828 17.386 0 38.602 45.822 36.684 54.565 67.733 0 37 46 37 56 65 0 1 1 1 1 1 4437.5 3783 3304 3656 8852 10214 10214 1 DVPALEITHTFLER Unmodified 1639.857 0.85697116 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 5.5 0.5 1 1 73.984 73.984 3 5.695E-05 27226 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.651 61.102 0 28.971 49.116 19.879 47.203 39.442 0 28 47 19 46 37 0 1 1 1 1 1 11816 3784 2168 3657 8853;8854 10215;10216 10215 2 DVPFSIVYFPLFANLNQLGR Unmodified 2309.2208 0.22083882 3075 Q9D6M3;E9PY45 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 9.8 4.45 1 1 2 1 110.7 110.7 3;4 1.4743E-38 30073 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 144.73 123.89 20.213 16.394 29.127 21.027 27.77 28.844 19 17 28 20 28 28 1 3 2 3 4 4 39096 3785 3075 3658 8855;8856;8857;8858;8859 10217;10218;10219;10220;10221;10222;10223;10224;10225 10222 9 DVPFSIVYFPLFANLNQLGRPSSEEK Unmodified 2966.5178 0.5178087 3075 Q9D6M3;E9PY45 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 1 11.2 1.07 2 2 1 1 99.386 99.386 3;4 3.6216E-20 32727 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.327 67.39 43.77 24.873 65.561 61.875 46.969 27.163 41 26 63 61 47 26 3 2 2 4 2 2 21255 3786 3075 3659 8860;8861;8862;8863;8864;8865 10226;10227;10228;10229;10230;10231;10232;10233 10229 8 DVPGTLLNIALLNLGSSDPSLR Unmodified 2264.2376 0.23761109 1885 Q04690 Nf1 Neurofibromin yes yes 0 0 0 0 10.5 0.5 1 1 101.86 101.86 3 2.1538E-10 33018 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.765 59.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4658.6 3787 1885 3660 8866;8867 10234;10235 10234 2 DVPLGAPLCIIVEK Unmodified 1522.8429 0.842901 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8.5 2.22 1 1 2 1 1 85.089 85.089 2;3 3.4945E-05 31032 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.11 67.165 118.15 128.02 248.28 157.72 195.45 251.29 111 130 241 158 195 241 2 3 4 4 4 7 43008 3788 2433 3661 8868;8869;8870;8871;8872;8873 10236;10237;10238;10239;10240;10241;10242;10243 10237 8 DVPPVPTLADIAWIAADEEETYAR Unmodified 2641.2912 0.29116281 700 D6RCX5;D3Z0X8;D3YW54;Q9CWE0 Mtfr1l Mitochondrial fission regulator 1-like yes no 0 0 0 0 5 0 1 103.75 103.75 3 2.118E-44 36197 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.64 141.2 0 0 1.9257 5.3502 0 0 0 0 2 5 0 0 0 0 1 1 0 0 982.96 3789 700 3662 8874 10244 10244 1 DVPSFGPPIPK Unmodified 1152.6179 0.61791009 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 7 0 1 68.141 68.141 3 0.0035325 23043 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.348 30.019 59.852 0 39.732 0 57.278 37.808 56 0 37 0 56 37 1 0 1 0 1 1 3082 3790 2033 3663 8875 10245 10245 1 DVPTSEQPELFLK Unmodified 1501.7664 0.76642482 2016 Q3UZJ4;Q61151 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 0 5 0 1 70.593 70.593 3 4.5565E-09 25655 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.19 72.083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3791 2016 3664 8876 10246 10246 1 DVPWGVDSLITLAFQDQR Unmodified 2059.0375 0.037454724 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 9.25 2.28 1 1 1 1 101.62 101.62 3 1.6964E-07 41196 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.891 82.402 9.657 0 5.1803 5.1563 38.044 19.168 9 0 5 5 37 19 1 0 1 1 1 1 16396 3792 2131 3665 8877;8878;8879;8880 10247;10248;10249;10250 10250 4 DVQATDTSIEELGR Unmodified 1532.7318 0.73183023 2827 Q99JB2 Stoml2 Stomatin-like protein 2, mitochondrial yes yes 0 0 0 0 2.67 0.471 1 2 56.56 56.56 2;3 9.2375E-11 19774 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.228 66.714 0 20.216 0 0 48.116 0 0 19 0 0 46 0 0 1 0 0 1 0 5700.8 3793 2827 3666 8881;8882;8883 10251;10252;10253 10253 3 DVQEECK Unmodified 906.3753 0.37529656 2631 Q8R0F8 Fahd1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 35.241 35.241 2 0.032233 9589 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.498 47.941 108.57 120.66 45.599 61.208 38.702 59.696 102 121 46 56 37 56 2 2 1 1 1 1 6287.3 3794 2631 3667 8884;8885 10254;10255 10254 2 DVQELYAAGENR Unmodified 1363.6368 0.63680763 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 4.5 0.5 1 1 53.528 53.528 2;3 0.00064943 17972 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.85 59.422 29.779 6.9219 38.646 39.231 0 39.442 28 9 37 38 0 37 1 1 1 2 0 1 5386.7 3795 1848 3668 8886;8887 10256;10257 10256 2 DVQMLQDAISK Unmodified 1246.6227 0.62273747 2107 Q61081 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 0 7.5 0.5 1 1 69.439 69.439 2;3 0.0076004 23733 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.135 22.159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3796 2107 3669 8888;8889 10258;10259 10258 2 DVSALFPDVVNCMQTDNLELKK Unmodified 2535.2349 0.23491026 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 1 8 0 1 84.843 84.843 4 0.0052555 30346 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.805 24.002 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1603.5 3797 1203 3670 8890 10260 10260 1 DVSDTVAFVEWTPPR Unmodified 1717.8312 0.83115034 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 5.75 0.829 2 1 1 77.911 77.911 2;3 1.0815E-10 29075 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.39 102.36 29.51 147.69 185.68 147.31 165.25 103.26 28 143 186 145 167 99 1 4 5 4 4 2 58979 3798 2479 3671 8891;8892;8893;8894 10261;10262;10263;10264;10265 10261 5 DVSEETHVCLPCR Unmodified 1600.6974 0.69737575 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 3 0 1 46.822 46.822 3 3.3542E-07 15156 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.605 76.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3799 2499 3672 8895 10266 10266 1 DVSSADLVIK Unmodified 1045.5655 0.56554017 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7.5 3.2 1 2 1 61.427 61.427 2;3 0.0013258 20737 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.889 22.521 216.23 236.09 280.23 293.32 195.29 184.38 204 240 278 287 203 176 4 5 3 5 4 3 35012 3800 2186 3673 8896;8897;8898;8899 10267;10268;10269;10270;10271 10268 5 DVSSLFPDVVNCMQTDNLELK Unmodified 2423.1349 0.13486186 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 8.25 2.77 1 2 1 92.115 92.115 3;4 6.1848E-06 34136 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.529 34.519 9.5583 49.363 0 49.042 65.737 0 9 47 0 46 65 0 1 2 0 2 2 0 5206.6 3801 3123 3674 8900;8901;8902;8903 10272;10273;10274;10275 10273 4 DVSSLFPDVVNCMQTDNLELKK Unmodified 2551.2298 0.22982488 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 1 10.5 2.5 1 1 84.583 84.583 4 5.553E-05 30219 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.87 26.191 79.402 19.743 28.301 37.191 115.27 0 74 19 28 38 111 0 1 1 1 2 2 0 8801.7 3802 3123 3675 8904;8905 10276;10277;10278 10276 3 DVSSLFPDVVNCMQTDNLELKK Deamidation (N) 2552.2138 0.21384046 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 1 0 1 8 0 1 84.652 84.652 5 1.0283E-06 30234 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.989 42.29 0 48.358 35.031 47.18 53.731 47.503 0 46 37 46 55 46 0 1 1 1 1 1 1972.8 3803 3123 3675 8906 10279 10279 1088 1 DVSSVELLMNNHQGIK Unmodified 1782.8934 0.89343302 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.75 0.829 2 1 1 65.625 65.625 3;4 4.2332E-12 22669 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.1 97.507 177.67 146.76 207.95 175.88 217.52 192.61 167 148 203 176 222 185 3 3 3 4 4 3 28622 3804 2148 3676 8907;8908;8909;8910 10280;10281;10282;10283 10281 4 DVSSVELLMNNHQGIK Deamidation (N) 1783.8774 0.87744861 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 6 0 1 67.005 67.005 3 4.5134E-08 23329 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.652 61.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3805 2148 3676 8911 10284 10284 837 1 DVSTTLNADEAVAR Unmodified 1460.7107 0.71070086 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 8.5 4.5 1 1 51.46 51.46 2;3 2.099E-16 17029 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.77 89.888 0 58.838 44.597 36.928 45.439 28.551 0 56 46 37 46 28 0 1 1 1 1 1 6323.7 3806 2137 3677 8912;8913 10285;10286 10286 2 DVSVPVAEIK Unmodified 1055.5863 0.58627561 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 7.5 3.2 1 2 1 62.283 62.283 2;3 5.1477E-05 21877 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.456 64.227 88.655 177.69 67.909 214.13 254.84 212.05 83 167 65 204 260 204 1 3 1 4 4 3 25309 3807 2594 3678 8914;8915;8916;8917 10287;10288;10289;10290 10287 4 DVTCDVHYENYR Unmodified 1569.6518 0.65180577 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7 Sept5 Septin-5 no no 0 0 0 0 3.5 1.12 1 1 1 1 43.496 43.496 3 1.4558E-08 13211 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.5 97.297 0 176.17 128.63 176.3 64.782 78.884 0 167 130 167 65 74 0 3 3 4 1 2 99540 3808 410;3398 3679 8918;8919;8920;8921 10291;10292;10293;10294;10295 10294 5 DVTCDVHYENYR Deamidation (N) 1570.6358 0.63582135 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7 Sept5 Septin-5 no no 0 1 0 0 2 0 1 45.477 45.477 3 0.039185 14121 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.891 35.839 0 29.792 0 20.767 0 20.254 0 28 0 19 0 19 0 1 0 1 0 1 3533.1 3809 410;3398 3679 8922 10296 10296 108 1 DVTDEDLNSYFK Unmodified 1444.6358 0.63580458 2621 Q8QZS1 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes yes 0 0 0 0 4 0 1 69.389 69.389 3 0.012336 25025 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.063 29.838 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 0 3526.4 3810 2621 3680 8923 10297 10297 1 DVTEQLNLVTTWLQLQIPR Unmodified 2266.2321 0.23213179 1067 G3UXZ5;P97371;G3X9K9;G3UWN9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 11.4 1.02 1 2 1 1 108.05 108.05 3;4 8.909E-58 33923 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 174.23 155.45 5.365 11.128 0 15.022 10.983 7.462 5 11 0 14 11 7 1 2 0 3 2 1 15281 3811 1067 3681 8924;8925;8926;8927;8928 10298;10299;10300;10301;10302;10303 10298 6 DVTFSPATIEEELIK Unmodified 1690.8665 0.8665328 999 F6USD5;F6T4L3;Q80ZP8;Q3TMX5;Q9CXI5 Manf Mesencephalic astrocyte-derived neurotrophic factor yes no 0 0 0 0 4.5 0.5 1 1 88.312 88.312 3 0.00022617 33447 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.246 35.418 0 0 0 9.2942 28.861 0 0 0 0 9 28 0 0 0 0 1 1 0 1409 3812 999 3682 8929;8930 10304;10305 10304 2 DVTGAEALLER Unmodified 1172.6037 0.60371659 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 62.034 62.034 2;3 1.5148E-10 22045 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 141.88 63.063 578.26 438.85 678.42 561.2 676.42 333.4 544 452 677 555 667 314 5 3 5 3 3 4 214830 3813 551 3683 8931;8932;8933;8934;8935 10306;10307;10308;10309;10310;10311;10312 10309 7 DVTNNVHYENYR Deamidation (N) 1523.6641 0.66408501 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 5 4.05 1 2 1 1 41.197 41.197 3 9.3145E-09 12328 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.34 102.14 147.92 36.131 203.21 107.5 264.98 29.106 139 37 195 102 259 28 3 1 4 2 4 1 53621 3814 879 3684 8936;8937;8938;8939;8940 10313;10314;10315;10316;10317 10314 232;233 5 DVTNNVHYENYR Unmodified 1522.6801 0.68006943 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 8 5 1 1 39.534 39.534 3 2.1171E-23 11072 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 166.7 146.32 127.38 126.58 124.59 40.441 121.91 144.7 120 129 120 37 120 139 2 2 1 1 1 2 53049 3815 879 3684 8941;8942 10318;10319 10319 2 DVTPEATK Unmodified 859.42871 0.42871234 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 6.5 3.77 2 1 1 40.35 40.35 2;3 0.0064624 11767 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.74 53.139 167.25 329.83 254.1 35.89 198.39 213.7 157 324 251 37 195 204 2 3 3 1 2 2 30376 3816 416 3685 8943;8944;8945;8946 10320;10321;10322;10323 10320 4 DVTQPQAEGTAK Unmodified 1243.6044 0.60444487 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 4 0 1 39.699 39.699 3 5.1028E-05 11416 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.831 59.662 0 0 67.397 65.85 62.647 67.502 0 0 65 65 65 65 0 0 1 1 1 1 5694.5 3817 3285 3686 8947 10324 10324 1 DVTTFFSGK Unmodified 1000.4866 0.48656157 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 9.83 1.57 1 2 2 1 69.166 69.166 2;3 0.00069217 20096 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.15 37.365 256.29 177.79 496.16 208.62 352.13 27.499 241 185 481 203 343 28 3 3 7 3 4 1 78827 3818 3453 3687 8948;8949;8950;8951;8952;8953 10325;10326;10327;10328;10329;10330;10331 10330 7 DVTYEEAK Unmodified 953.43419 0.43419164 2729 Q91V41;Q50HX3;A0A2R8VHW9 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 5 4.05 1 2 1 1 44.247 44.247 2;3 0.0011058 13530 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 145.63 99.915 354.62 291.77 472.56 196.97 375.59 472.86 333 288 459 189 375 450 4 3 4 3 4 4 76547 3819 2729 3688 8954;8955;8956;8957;8958 10332;10333;10334;10335;10336 10335 5 DVVDYIIFGTVIQEVK Unmodified 1836.9873 0.98731663 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 7.5 0.5 1 1 103.79 103.79 3 4.2477E-06 36299 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.94 80.145 21.36 19.84 0 8.4614 15.023 23.023 20 20 0 8 15 22 2 2 0 1 1 2 5862 3820 2834 3689 8959;8960 10337;10338 10338 2 DVVELTDDTFDK Unmodified 1395.6406 0.64055561 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 4 0 1 71.114 71.114 3 0.015366 25872 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.991 23.038 0 0 0 0 0 38 0 0 0 0 0 38 0 0 0 0 0 1 1534.5 3821 1933 3690 8961 10339 10339 1 DVVEQHK Unmodified 853.42938 0.42938104 3195;689 Q9ESN6;Q3UHH4;E9QKC6;D3YY69;D3YZJ0;Q3TDT0;D3YUY7;Q9R1R2;D3Z7V9 Trim2;Trim3 Tripartite motif-containing protein 2;Tripartite motif-containing protein 3 no no 0 0 0 0 5 0 1 33.021 33.021 3 0.047066 7692 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.127 26.57 118.35 39.393 93.957 83.247 99.561 96.297 111 46 93 83 102 93 1 1 1 1 1 1 4980.6 3822 3195;689 3691 8962 10340 10340 1 DVVIQDDDVECTMVEK Unmodified 1893.8336 0.83359446 1796;2030;1425 P68404;P20444;Q4VA93 Prkcb;Prkca Protein kinase C beta type;Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 3 1 1 1 67.009 67.009 3 8.0734E-06 24154 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.158 65.103 29.904 27.776 20.558 0 27.631 68.502 28 28 19 0 28 65 1 1 1 0 1 2 8626.5 3823 1796;1425;2030 3692 8963;8964 10341;10342 10341 2 DVVVAPSQLR Unmodified 1082.6084 0.60840804 95 A0A0G2JFB0;D3YXR8;Q80U40;A0A0G2JGW5 Rimbp2 RIMS-binding protein 2 yes no 0 0 0 0 6 0 1 52.362 52.362 2 0.052755 16457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.927 8.6803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3824 95 3693 8965 10343 10343 1 DVVVDLVCYR Unmodified 1236.6173 0.61725816 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 6 0 1 70.081 70.081 2 0.0091996 24781 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.704 25.595 0 0 85.134 104.87 82.001 0 0 0 83 102 83 0 0 0 1 1 1 0 12444 3825 628;2074 3694 8966 10344 10344 1 DVWDYVFFK Unmodified 1217.5757 0.57571092 2434 Q8BMJ2 Lars Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 92.38 92.38 3 0.025298 33534 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.198 29.872 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 693.14 3826 2434 3695 8967 10345 10345 1 DVYIVQDLMETDLYK Unmodified 1843.8914 0.89136734 1769;769 P63085;D3Z3G6;Q63844;A0A0U1RPX4;D3Z6D8;A0A0U1RPZ0 Mapk1;Mapk3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 0 0 0 0 6 0.707 1 2 1 91.69 91.69 3;4 6.3932E-05 34686 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.734 61.175 44.756 28.859 36.564 19.7 37.874 0 42 28 37 19 37 0 3 1 3 1 2 0 15613 3827 1769;769 3696 8968;8969;8970;8971 10346;10347;10348;10349;10350;10351 10346 6 DVYSTDYYR Unmodified 1180.5037 0.50366819 1384;61 A0A0A6YWL7;A0A0A6YWF9;Q6VNS1;P15209 Ntrk3;Ntrk2 Tyrosine-protein kinase receptor;NT-3 growth factor receptor;BDNF/NT-3 growth factors receptor no no 0 0 0 0 5 0 1 48.794 48.794 2 0.060755 15403 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.683 28.297 0 0 47.171 58.397 0 0 0 0 46 56 0 0 0 0 1 1 0 0 2614.4 3828 61;1384 3697 8972 10352 10352 1 DVYTGDALR Unmodified 1008.4876 0.4876242 413 A0A338P7C0;O09061 Psmb1 Proteasome subunit beta type-1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 47.122 47.122 2 0.00022737 14953 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.28 74.774 108.19 108.83 338.95 161.84 202.34 233.01 102 111 324 158 204 222 1 1 2 2 2 2 39871 3829 413 3698 8973;8974;8975;8976 10353;10354;10355;10356 10354 4 DWFIEMPTESK Unmodified 1381.6224 0.62240312 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 6 0 1 78.969 78.969 2 1.3367E-07 28935 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.06 69.609 20.026 38.616 27.878 0 28.291 29.041 19 38 28 0 28 28 1 1 1 0 1 1 4042.7 3830 1424 3699 8977 10357 10357 1 DWGSSSGSQGR Unmodified 1122.469 0.46901402 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 6 0 1 34.109 34.109 2 0.00042377 7885 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.692 65.965 29.857 27.646 7.9287 0 18.867 29.31 28 28 9 0 19 28 1 1 1 0 1 1 1581.6 3831 407 3700 8978 10358 10358 1 DWLASTFTQQTR Unmodified 1452.6997 0.69974224 373 Q6PDS5;A0A2I3BPC1;Q01065;A0A2I3BR90 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 9.5 0.5 1 1 69.074 69.074 3 0.0021716 22163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.122 39.18 29.764 48.944 47.02 58.406 67.99 88.478 28 46 46 56 65 83 1 1 1 1 1 1 8075.1 3832 373 3701 8979;8980 10359;10360 10359 2 DWNVDLIPK Unmodified 1098.571 0.5709599 1595;2132 Q61598;A0A1Y7VL99;P50396;D6RI86 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 0 8.5 2.69 1 1 1 1 74.606 74.606 2;3 0.0045258 26971 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.303 33.576 296.91 129.94 122.87 301.43 320.83 298.64 278 130 121 288 325 287 4 2 2 4 3 3 53774 3833 2132;1595 3702 8981;8982;8983;8984 10361;10362;10363;10364 10361 4 DWSFPYEFSYGADGGAK Unmodified 1895.8002 0.80024414 2398 Q8BH66 Atl1 Atlastin-1 yes yes 0 0 0 0 7 0 1 81.917 81.917 3 4.9461E-06 29530 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.784 54.768 29.632 27.02 46.323 37.68 0 29.848 28 28 46 37 0 28 1 1 1 1 0 1 2858 3834 2398 3703 8985 10365 10365 1 DWSPTLYIR Unmodified 1149.5819 0.58185893 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 10.5 2.5 1 1 68.871 68.871 2 0.00044464 25426 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.7 75.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3835 2179 3704 8986;8987 10366;10367 10367 2 DWVIPPINLPENSR Unmodified 1648.8573 0.85730551 727 D3YYT0;P15116 Cdh2 Cadherin-2 yes no 0 0 0 0 7 0 1 80.708 80.708 3 0.01937 28956 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.53 10.092 0 0 0 0 0 84 0 0 0 0 0 84 0 0 0 0 0 1 2111.4 3836 727 3705 8988 10368 10368 1 DWVLNEFK Unmodified 1049.5182 0.51819605 2135 Q8BTS0;Q61656;S4R1I6 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 9.33 2.62 1 1 1 75.064 75.064 2 0.011386 28336 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.649 44.231 99.256 0 167.6 93.347 194.4 236.89 93 0 157 92 195 231 2 0 2 2 3 3 14991 3837 2135 3706 8989;8990;8991 10369;10370;10371;10372 10372 4 DYAAYNVLDDPELR Unmodified 1652.7682 0.76821573 349 A0A1Y7VN70;Q80Y14 Glrx5 Glutaredoxin-related protein 5, mitochondrial yes no 0 0 0 0 6.25 3.96 1 1 1 1 70.658 70.658 3 0.00031163 25606 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.168 57.062 0 48.315 28.537 109.93 120.2 38.375 0 47 28 102 121 37 0 2 1 2 3 1 20963 3838 349 3707 8992;8993;8994;8995 10373;10374;10375;10376 10374 4 DYAEACGDAAAAAR Unmodified 1410.5834 0.58339185 2391 Q8BGX2 Uncharacterized protein C19orf52 homolog yes yes 0 0 0 0 2 0 1 42.182 42.182 2 0.00014789 12815 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.903 67.955 0 9.576 0 0 0 20.254 0 9 0 0 0 19 0 1 0 0 0 1 2813.1 3839 2391 3708 8996 10377 10377 1 DYASALETFAEGQK Unmodified 1528.7046 0.70455285 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 6 0 1 75.999 75.999 3 0.040965 27543 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.954 10.1 39.701 0 0 30.604 0 59.696 37 0 0 28 0 56 1 0 0 1 0 1 6280.4 3840 2983 3709 8997 10378 10378 1 DYAVSTVPVADSLHLK Unmodified 1713.8938 0.8937506 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 7 0.707 1 2 1 66.544 66.544 3;4 1.3706E-07 23135 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.07 86.968 167.48 126.05 58.188 159.39 0 108.73 157 130 65 149 0 102 3 3 2 3 0 3 18764 3841 2980 3710 8998;8999;9000;9001 10379;10380;10381;10382 10379 4 DYCDNSR Unmodified 928.33449 0.33449438 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 2 0 1 25.512 25.512 2 0.037006 5153 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.684 71.167 20.387 0 0 25.139 0 24.518 19 0 0 23 0 23 1 0 0 1 0 1 2236.9 3842 1039 3711 9002 10383 10383 1 DYCVTANSK Unmodified 1056.4546 0.45460951 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 8 3.56 1 1 1 43.177 43.177 2 2.6515E-05 12213 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 144.77 96.922 147.23 205.9 328.09 210.55 376.19 216.32 139 208 324 217 376 213 2 3 3 3 3 3 35544 3843 1315 3712 9003;9004;9005 10384;10385;10386 10385 3 DYDDMSPR Unmodified 997.38111 0.38111022 613 B2M1R6;P61979;H3BKD0;H3BLL4;H3BLP7 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 2 0 1 40.547 40.547 2 0.008761 12032 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102 78.959 0 0 0 29.743 45.769 28.542 0 0 0 28 46 28 0 0 0 1 1 1 12300 3844 613 3713 9006 10387 10387 1 DYDHLFK Unmodified 936.43413 0.43413207 2250 Q6PHN9;S4R1W7 Rab35 Ras-related protein Rab-35 yes no 0 0 0 0 13 0 1 54.101 54.101 3 0.034746 18278 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.441 27.699 127.1 146.31 155.29 140.32 124.9 135.02 120 148 158 139 130 130 1 1 1 1 1 1 11069 3845 2250 3714 9007 10388 10388 1 DYDLDHPGEVDSVSR Unmodified 1702.7435 0.74345755 2544 Q8CH09 Sugp2 SURP and G-patch domain-containing protein 2 yes yes 0 0 0 0 2 0 1 47.949 47.949 3 0.00094457 15183 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.66 44.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3846 2544 3715 9008 10389 10389 1 DYEAGPGDK Unmodified 950.39814 0.39814049 641 B9EJA2;D3Z551;D3Z1E3 Cttnbp2 Cortactin-binding protein 2 yes no 0 0 0 0 3 0 1 40.549 40.549 2 0.0060043 12278 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.173 26.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3847 641 3716 9009 10390 10390 1 DYEEIGPSICR Unmodified 1337.5922 0.59216562 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 6.67 4.5 1 1 1 54.233 54.233 2 6.1966E-13 18258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.88 110.49 49.176 36.052 0 0 84.191 76.482 46 37 0 0 83 74 1 1 0 0 2 2 18416 3848 2836 3717 9010;9011;9012 10391;10392;10393 10392 3 DYEETIGK Unmodified 953.43419 0.43419164 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3;E9Q1G1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 3.5 0.5 1 1 49.909 49.909 2 0.010851 16198 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.815 65.203 59.613 24.789 108.58 0 0 148.17 56 28 102 0 0 139 1 1 2 0 0 2 8547.2 3849 3122 3718 9013;9014 10394;10395 10395 2 DYEEYGPSICR Unmodified 1387.5714 0.57143018 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 3 0 1 51.544 51.544 2 1.3257E-08 17407 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.93 85.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3850 2170 3719 9015 10396 10396 1 DYENDEDVNK Unmodified 1239.4891 0.48914034 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 0 1.5 0.5 1 1 42.108 42.108 2;3 2.133E-07 12785 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.49 109.41 34.029 66.674 75.072 67.066 31.771 19.347 32 66 76 66 32 19 1 2 2 2 1 1 10232 3851 1227 3720 9016;9017 10397;10398 10398 2 DYESASLTEVR Unmodified 1268.5885 0.58846046 3209 Q9JI91 Actn2 Alpha-actinin-2 yes yes 0 0 0 0 3.5 0.5 1 1 49.883 49.883 2 7.0445E-13 16643 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 145.9 95.864 80.353 39.368 20.456 100.99 64.212 86.646 75 37 19 93 65 83 2 1 1 2 2 3 7435.8 3852 3209 3721 9018;9019 10399;10400;10401 10400 3 DYETATLSDIK Unmodified 1254.598 0.59796251 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 4.5 0.5 1 1 61.202 61.202 2;3 0.00033971 21445 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.658 60.672 59.783 64.494 37.999 57.537 74.761 0 56 65 37 56 74 0 1 2 1 2 2 0 9980.5 3853 310 3722 9020;9021 10402;10403;10404 10402 3 DYETVVK Unmodified 852.4229 0.42289868 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 5 0 2 49.212 49.212 2;3 0.034519 15585 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.671 34.823 217.15 150.72 164.32 139.94 116.58 124.59 204 158 167 139 120 120 2 2 2 2 1 1 11892 3854 2080 3723 9022;9023 10405;10406 10405 2 DYFEEYGK Unmodified 1049.4342 0.43419164 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 6.4 3.38 2 1 1 1 59.834 59.834 2;3 0.0042012 20780 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.27 81.036 344.5 673.13 351.57 299.02 496.95 567.86 324 660 362 297 499 546 4 5 3 3 3 5 102140 3855 1271 3724 9024;9025;9026;9027;9028 10407;10408;10409;10410;10411 10411 5 DYFEEYGKIDTIEIITDR Unmodified 2219.0634 0.063394703 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 1 5 0 1 80.973 80.973 3 0.00022722 30562 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.728 42.58 29.754 57.578 0 40.441 0 29.848 28 56 0 37 0 28 1 1 0 1 0 1 4158.1 3856 1271 3725 9029 10412 10412 1 DYFEQYGK Unmodified 1048.4502 0.45017606 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 7.4 2.87 1 2 1 1 58.507 58.507 2;3 0.0046378 20159 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.04 77.888 374.9 201.12 357.56 209.87 424.12 344.71 352 212 352 205 426 333 4 3 5 3 5 4 49051 3857 1586 3726 9030;9031;9032;9033;9034 10413;10414;10415;10416;10417 10417 5 DYFFALAHTVR Unmodified 1338.6721 0.67207093 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 10.8 1.48 1 1 1 1 67.421 67.421 3 1.2382E-08 21428 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.98 98.189 207.81 158.77 164.23 195.73 193.35 136.7 195 158 157 186 194 130 4 3 3 3 3 3 128460 3858 2555 3727 9035;9036;9037;9038 10418;10419;10420;10421;10422;10423 10418 6 DYFGLLFQDHPEQK Unmodified 1735.8206 0.82058566 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 7 0 2 74.813 74.813 3;4 9.95E-05 26168 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.845 72.267 39.365 36.283 94.899 75.226 0 89.544 37 37 93 74 0 84 1 1 2 2 0 2 8210 3859 1250 3728 9039;9040 10424;10425 10425 2 DYFGLTYCDADSQK Unmodified 1681.693 0.69300188 526 A2AUK5;A2AUK8;A2AUK7;E9PV14 Epb4.1l1 yes no 0 0 0 0 9.5 3.5 1 1 67.877 67.877 3 4.0191E-05 23755 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.185 64.523 127.98 108.83 38.236 99.232 185.46 132.22 120 111 37 93 186 129 2 2 1 1 2 2 10630 3860 526 3729 9041;9042 10426;10427 10426 2 DYFNVPYPLPK Unmodified 1351.6812 0.68123863 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F7ANF4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10 2.16 1 1 1 77.121 77.121 2;3 8.5846E-09 26054 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.06 73.581 49.225 85.284 46.243 60.158 112.76 47.411 46 84 46 56 112 46 1 2 1 1 2 1 24128 3861 1899 3730 9043;9044;9045 10428;10429;10430 10429 3 DYGGYLSTYILPAK Unmodified 1559.7872 0.78716026 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 9 1 1 1 79.39 79.39 2;3 0.0001088 24694 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.793 71.96 0 69.16 9 0 84.851 57.275 0 65 9 0 83 56 0 1 1 0 1 1 7528.3 3862 2322 3731 9046;9047 10431;10432 10432 2 DYGVLLESAGIALR Unmodified 1475.7984 0.79839365 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 83.645 83.645 2;3 3.1839E-05 29734 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.73 71.922 59.551 153.61 54.617 80.02 17.55 59.195 56 149 56 75 19 56 2 4 2 2 1 2 42235 3863 1422 3732 9048;9049;9050;9051 10433;10434;10435;10436 10434 4 DYHFVISR Unmodified 1035.5138 0.51377937 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 6.5 0.5 1 1 49.136 49.136 3 0.016678 14901 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.729 29.205 40.375 65.209 73.459 55.973 45.539 67.991 38 65 74 56 46 65 1 2 2 2 1 2 11182 3864 690 3733 9052;9053 10437;10438 10437 2 DYHFVTSR Unmodified 1023.4774 0.47739386 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg1 Disks large homolog 1 yes no 0 0 0 0 5 0 1 40.838 40.838 3 0.007127 11548 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.825 49.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3865 767 3734 9054 10439 10439 1 DYIEEEVTDEK Unmodified 1368.5933 0.59327106 274 A0A1D5RLG3;Q80UJ7 Rab3gap1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 0 2 0.816 1 1 1 59.447 59.447 2;3 0.00096943 19278 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.153 43.917 48.854 45.95 45.704 48.198 27.074 29.848 46 47 47 46 28 28 2 2 2 1 1 1 4748.3 3866 274 3735 9055;9056;9057 10440;10441;10442 10440 3 DYILSHPEDGEK Unmodified 1401.6412 0.64122431 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 4 0 1 49.141 49.141 3 1.5112E-05 15855 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.094 69.155 0 0 69.62 15.934 36.322 48 0 0 65 19 37 46 0 0 1 1 1 1 3330.5 3867 343 3736 9058 10443 10443 1 DYIPVDQEELR Unmodified 1375.662 0.66195975 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 2 0 1 59.37 59.37 3 3.1783E-08 20474 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.9 76.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2653.1 3868 3204 3737 9059 10444 10444 1 DYKAEEDPAK Unmodified 1164.5299 0.52988294 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 1 4 0 1 41.972 41.972 3 0.0010426 12521 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.301 48.724 127.58 0 197.61 140.15 0 157.77 120 0 189 139 0 148 1 0 1 1 0 1 11424 3869 1148 3738 9060 10445 10445 1 DYLGDFIEHYAQLGPSQPPDLAQAQDEPR Unmodified 3269.5265 0.52653549 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 7.86 3.31 2 2 1 2 85.492 85.492 3;4 8.6229E-33 32568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.84 99.934 69.377 46.44 99.237 15.556 66.362 75.411 65 46 93 18 65 74 3 2 3 2 2 2 49924 3870 1542 3739 9061;9062;9063;9064;9065;9066;9067 10446;10447;10448;10449;10450;10451;10452;10453;10454 10446 9 DYLHLPPEIVPATLR Unmodified 1732.9512 0.9512059 1785 P63325;A0A338P7K4;Q3UW83;A0A338P731 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 7.5 0.5 1 1 74.23 74.23 3 0.001085 26035 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.501 39.168 0 98.952 0 0 97.278 0 0 93 0 0 93 0 0 2 0 0 2 0 9003.1 3871 1785 3740 9068;9069 10455;10456 10455 2 DYLLCDYNR Unmodified 1230.5339 0.53392246 495;1565 A2AMW0;F7CAZ6;P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 6 0.816 1 1 1 58.085 58.085 2;3 0.00093474 19167 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.731 51.198 97.69 147.86 180.68 113.18 167.89 113.54 92 148 176 111 167 111 2 3 2 2 2 2 25094 3872 495;1565 3741 9070;9071;9072 10457;10458;10459 10458 3 DYLSDSELNQLR Unmodified 1451.6892 0.68923713 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 7.33 4.03 1 1 1 63.565 63.565 2;3 0.00013618 22509 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.278 61.896 0 39.96 28.261 49.687 0 89.544 0 38 28 47 0 84 0 2 1 2 0 2 6489.7 3873 1275 3742 9073;9074;9075 10460;10461;10462 10460 3 DYNPLLAR Unmodified 960.50288 0.50288033 2243 Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 6.5 0.5 1 1 54.707 54.707 2 0.0068498 16703 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.01 66.229 235.85 97.289 313.5 237.14 403.29 336.01 222 102 306 241 407 326 2 1 2 2 2 2 43785 3874 2243 3743 9076;9077 10463;10464 10464 2 DYNPTASVK Unmodified 993.47673 0.47672516 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.5 3.28 2 1 1 46.627 46.627 2;3 0.00072259 12982 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.03 72.698 285.86 388.42 371 191.33 420.09 212.78 269 389 367 190 417 204 3 4 3 2 4 2 83122 3875 1055 3744 9078;9079;9080;9081 10465;10466;10467;10468 10467 4 DYPLPDVAHVTMLSASQK Unmodified 1970.9772 0.97716265 1418 P19783 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 0 8 0 1 71.092 71.092 3 0.013299 23842 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.672 17.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3876 1418 3745 9082 10469 10469 1 DYQEASNLEQFVTR Unmodified 1698.7849 0.78492843 2368 Q8BG18 Necab1 N-terminal EF-hand calcium-binding protein 1 yes yes 0 0 0 0 4 0 1 67.884 67.884 3 9.4177E-06 24341 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.17 84.935 20.21 18.62 13.929 0 19.051 23.974 19 19 14 0 19 23 1 1 1 0 1 1 5246.9 3877 2368 3746 9083 10470 10470 1 DYQELMNTK Unmodified 1140.5121 0.51212439 657 CON__P04264 no no 0 0 0 0 7 0 1 58.449 58.449 3 0.025122 18527 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.284 4.3111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 3878 657 3747 9084 10471 10471 1 DYSGQGVVK Unmodified 951.46616 0.46616048 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 44.455 44.455 2;3 0.0010257 13313 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.213 54.403 99.227 111.41 360 205.64 183.99 300.69 93 111 337 195 185 287 1 1 3 3 2 3 54655 3879 1263 3748 9085;9086;9087;9088 10472;10473;10474;10475 10472 4 DYSGSQGGYDR Unmodified 1203.4792 0.47924436 1291 O89086 Rbm3 RNA-binding protein 3 yes yes 0 0 0 0 3 0.816 1 1 1 32.957 32.957 2 1.2409E-05 8809 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.13 55.419 0 28.423 9.1727 0 0 0 0 28 9 0 0 0 0 2 1 0 0 0 5605.5 3880 1291 3749 9089;9090;9091 10476;10477;10478 10477 3 DYSGYQR Unmodified 887.37735 0.37734547 2093 Q60865;A2BH47;F6YP03 Caprin1 Caprin-1 yes no 0 0 0 0 5 0 1 33.21 33.21 2 0.034876 7890 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.386 75.156 20.387 0 0 49.612 35.433 28.837 19 0 0 46 37 28 1 0 0 1 1 1 2632.1 3881 2093 3750 9092 10479 10479 1 DYSHSSSR Unmodified 937.38897 0.38897279 385 A0A2I3BRL8;Q91VM5 Rbmxl1 RNA binding motif protein, X-linked-like-1 yes no 0 0 0 0 3.5 0.5 1 1 16.71 16.71 3 0.0020504 2452 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.431 41.754 0 5.237 4.9629 2.9832 0 5.33 0 5 5 3 0 5 0 1 1 1 0 1 463.17 3882 385 3751 9093;9094 10480;10481 10480 2 DYSVTANSK Unmodified 983.45599 0.45598972 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 6 0 1 42.562 42.562 2 0.0043321 11884 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.149 46.881 39.516 36.703 0 49.593 36.424 0 37 37 0 46 37 0 1 1 0 1 1 0 2177.3 3883 1389 3752 9095 10482 10482 1 DYTRPDLPSGDGQPALDPAIAAAFAK Unmodified 2656.3133 0.31329523 2780 Q91Z31;A0A0G2JGW0 Ptbp2 Polypyrimidine tract-binding protein 2 no no 0 0 0 1 5 0 1 77.136 77.136 5 3.2886E-05 28772 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.287 35.832 9.51 29.151 0 40.102 18.032 0 9 28 0 37 19 0 1 1 0 1 1 0 1578.4 3884 2780 3753 9096 10483 10483 1 DYTYEELLNR Unmodified 1314.6092 0.6091959 2855 Q99L45 Eif2s2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 0 4 0 1 63.7 63.7 2 0.0017262 22619 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.08 51.531 0 0 18.837 38.624 36.928 0 0 0 19 37 37 0 0 0 1 1 1 0 3166.4 3885 2855 3754 9097 10484 10484 1 DYVLNCNILPPLLQLFSK Unmodified 2146.1496 0.14964771 2098 Q60960;G3UXF0 Kpna1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 0 11.5 0.5 1 1 108.82 108.82 3 1.9524E-07 29769 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.709 65.22 5 0 0 0 4 6 5 0 0 0 4 6 1 0 0 0 1 1 3377 3886 2098 3755 9098;9099 10485;10486;10487;10488 10488 4 DYVLNCSILNPLLTLLTK Unmodified 2089.1493 0.14931336 1189 Q4FJZ2;O35345 Kpna6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 0 0 12 0 1 110.9 110.9 3 8.9906E-09 30127 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.67 95.879 0 9.3683 12.422 0 0 0 0 9 12 0 0 0 0 1 1 0 0 0 4362.4 3887 1189 3756 9100 10489 10489 1 DYVPDTYADVIEALSNPIR Unmodified 2150.0532 0.053164368 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 95.635 95.635 3 3.7143E-14 36115 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.9 102.36 66.404 0 25.448 45.083 63.38 23.276 62 0 24 42 62 22 3 0 2 3 4 2 21189 3888 3373 3757 9101;9102;9103;9104 10490;10491;10492;10493;10494 10491 5 EAAAAVDVR Unmodified 900.46649 0.46649483 614;786 D3Z7D3;F8WI56;Q8BWT5;B2RQ71;E9PWR4;B7ZMZ7;A0A1Y7VMZ0 Dip2a;Dip2c Disco-interacting protein 2 homolog A no no 0 0 0 0 3 0 1 38.048 38.048 2 0.056653 11230 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.549 17.529 0 0 29.01 28.875 0 29.848 0 0 28 28 0 28 0 0 1 1 0 1 3922.4 3889 786;614 3758 9105 10495 10495 1 EAAAGPQGQHEER Unmodified 1378.6226 0.62255455 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 13 0 1 21.514 21.514 3 9.5243E-05 3154 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.527 54.291 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 501.89 3890 2483 3759 9106 10496 10496 1 EAAALGSHGSCSSEVEK Unmodified 1717.7577 0.7577274 2954 Q9CR51 Atp6v1g1 V-type proton ATPase subunit G 1 yes yes 0 0 0 0 4 0 1 39.607 39.607 3 1.5422E-05 11365 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.805 57.829 39.701 0 0 0 29.288 0 37 0 0 0 28 0 1 0 0 0 1 0 4081 3891 2954 3760 9107 10497 10497 1 EAAASNTNTLNR Unmodified 1260.6058 0.60584185 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 5.2 3.97 1 1 2 1 31.492 31.492 2;3 3.1624E-20 7910 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 155.47 103.52 126.95 63.723 86.222 42.406 106.98 87.058 121 65 83 42 107 84 4 2 2 2 4 3 28294 3892 1025 3761 9108;9109;9110;9111;9112 10498;10499;10500;10501;10502 10499 5 EAADGYQR Unmodified 908.39881 0.39880919 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 27.703 27.703 2 0.0078284 6066 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 82.666 187.76 108.62 110.4 173.99 199.39 232.33 176 111 112 168 204 222 4 2 2 4 4 4 112540 3893 2092 3762 9113;9114;9115;9116 10503;10504;10505;10506;10507 10504 5 EAADLDR Unmodified 788.36645 0.36644643 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 1 0 1 32.64 32.64 2 0.027587 7961 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.19 35.896 138.56 67.751 98.215 165.78 56.366 116.72 130 74 102 158 65 111 1 1 1 1 1 1 24636 3894 1035 3763 9117 10508 10508 1 EAADNQEAK Unmodified 974.4305 0.43050325 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 2 0 1 29.987 29.987 2 0.01645 7109 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.224 23.142 0 9.4227 9.1727 0 29.288 0 0 9 9 0 28 0 0 1 1 0 1 0 1140 3895 1817 3764 9118 10509 10509 1 EAADPLASK Unmodified 900.45526 0.45526144 3211 Q9JIF7 Copb1 Coatomer subunit beta yes yes 0 0 0 0 4 0 1 48.875 48.875 2 0.019714 15701 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.305 26.157 29.593 36.623 44.818 58.537 0 59.696 28 37 46 56 0 56 1 1 1 1 0 1 2064.4 3896 3211 3765 9119 10510 10510 1 EAAEDVAAQGSAGEK Unmodified 1431.6478 0.64776625 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 4.75 4.82 1 1 1 1 42.838 42.838 2;3 8.1952E-26 13179 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 151.3 121.83 167.33 419.8 372.36 208.69 413.11 483.9 158 411 372 204 420 465 3 5 4 2 5 5 83289 3897 90 3766 9120;9121;9122;9123 10511;10512;10513;10514;10515 10512 5 EAAEGLGEDGAGK Unmodified 1202.5415 0.54151026 896 E9Q3M9;E0CXB3 2010300C02Rik yes no 0 0 0 0 2.5 0.5 1 1 44.543 44.543 2 7.8468E-05 14084 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.43 75.42 0 39.368 0 51.041 17.529 0 0 37 0 47 19 0 0 1 0 1 1 0 3119.6 3898 896 3767 9124;9125 10516;10517 10517 2 EAAEGLGSHER Unmodified 1154.5316 0.53161428 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 2 0.816 1 1 1 28.024 28.024 3 3.1401E-06 6248 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 104.59 79.207 98.862 36.63 124.83 76.189 82.397 38.375 93 37 121 74 83 37 3 1 3 2 2 1 14793 3899 1155 3768 9126;9127;9128 10518;10519;10520 10519 3 EAAEGLR Unmodified 744.37662 0.37661719 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 2 0 1 31.635 31.635 2 0.025329 7790 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.75 27.118 99.106 61.429 62.708 77.145 0 0 93 65 65 74 0 0 1 1 1 1 0 0 10377 3900 287;1450 3769 9129 10521 10521 1 EAAEMGK Unmodified 734.32689 0.3268898 1729;1341 P10126;D3Z3I8;D3YZ68;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 7 3.54 1 1 1 1 38.148 38.148 2 0.025802 10362 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.19 49.222 551.28 293.14 419.55 325.98 685.65 703.2 516 300 408 328 690 672 3 3 2 2 3 3 84000 3901 1341;1729 3770 9130;9131;9132;9133 10522;10523;10524;10525 10523 4 EAAENSLVAYK Deamidation (N) 1194.5768 0.57683314 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 1 0 0 3.33 0.471 2 1 56.558 56.558 3 2.0599E-05 19754 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.93 70.498 9.3475 136.49 71.558 86.387 145.89 144.01 9 130 74 84 148 139 1 3 2 2 3 3 15658 3902 1715 3771 9134;9135;9136 10526;10527;10528 10528 667 3 EAAENSLVAYK Unmodified 1193.5928 0.59281755 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 0 6.57 2.77 1 2 2 1 1 54.778 54.778 2;3 6.4777E-20 18302 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 170.99 135.89 942.92 851.86 943.04 736.11 977.12 1084.8 888 867 945 738 996 1043 7 6 5 6 6 7 499550 3903 1715 3771 9137;9138;9139;9140;9141;9142;9143 10529;10530;10531;10532;10533;10534;10535;10536 10536 8 EAAEQDVEK Unmodified 1017.4615 0.46146903 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 0 1.5 0.5 1 1 38.631 38.631 2;3 0.00061667 11174 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.867 44.669 39.516 36.703 0 0 38.702 0 37 37 0 0 37 0 1 1 0 0 1 0 7224.5 3904 1574 3772 9144;9145 10537;10538 10538 2 EAAEVLQNNR Unmodified 1142.568 0.56799978 1686 P61082;F7CDT0;F6WMC0;G5E919 Ube2m NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 0 4 0 1 41.283 41.283 2 0.00015302 12108 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.57 63.01 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 6251.9 3905 1686 3773 9146 10539 10539 1 EAAEVTR Unmodified 774.38718 0.38718187 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 2 0.816 1 1 1 27.433 27.433 2 0.013162 6030 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 116.3 42.108 469.59 357.64 121.99 546.05 450.82 488.16 440 359 120 514 471 470 3 2 1 3 3 3 61284 3906 3204 3774 9147;9148;9149 10540;10541;10542 10541 3 EAAFSLAEAK Unmodified 1035.5237 0.52367535 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 8 3.56 1 1 1 60.226 60.226 2;3 1.154E-08 20995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.35 78.971 59.602 163.51 94.112 143.36 157.45 162.87 56 158 93 139 158 157 1 2 2 3 1 2 27799 3907 1648 3775 9150;9151;9152 10543;10544;10545 10545 3 EAAGEAEEEAELGSVPGGERPAGEGQGEPSLR Unmodified 3164.4494 0.44940738 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 1 1 0 1 54.785 54.785 4 3.6634E-54 17052 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.04 104.57 0 20.216 0 9.837 0 0 0 19 0 9 0 0 0 1 0 1 0 0 4220.6 3908 2320 3776 9153 10546 10546 1 EAAGEGPVLYEDPPDQK Unmodified 1813.837 0.83702358 1473 P28352;D3Z124;D3Z6R9;F6QA74 Apex1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 0 2.33 0.471 2 1 57.076 57.076 3;4 3.1379E-06 19347 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.301 56.163 49.637 74.405 122.49 83.434 57.294 50.102 47 75 121 84 56 47 2 3 3 3 1 2 10896 3909 1473 3777 9154;9155;9156 10547;10548;10549 10547 3 EAALGAGFSDK Unmodified 1064.5138 0.51383895 2834 Q99JY0 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes yes 0 0 0 0 5 0 1 55.412 55.412 2 0.0031121 18564 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.951 29.313 0 0 0 0 45.451 77.587 0 0 0 0 46 74 0 0 0 0 1 1 2634.9 3910 2834 3778 9157 10550 10550 1 EAALTNEEVGADLEQVEVLQK Unmodified 2284.1434 0.14343594 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.57 0.904 1 2 3 1 78.23 78.23 3;4 5.6429E-30 29584 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.68 121.09 79.909 84.126 154.13 189.1 256.42 143.52 75 83 148 185 259 139 4 4 3 4 5 2 146090 3911 551 3779 9158;9159;9160;9161;9162;9163;9164 10551;10552;10553;10554;10555;10556;10557 10553 7 EAALTNEEVGADLEQVEVLQK Deamidation (N) 2285.1275 0.12745152 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 3 0 2 79.456 79.456 3;4 2.4045E-07 29784 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.259 45.697 26.504 56.634 5.9171 0 6.276 20.254 25 55 6 0 6 19 2 2 1 0 1 1 3586.2 3912 551 3779 9165;9166 10558;10559 10558 147 2 EAANDTGLASAQDAPTGPQLSEE Unmodified 2271.0139 0.013878328 1934 Q3TPE9 Ankmy2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 0 2 0 1 61.017 61.017 3 0.0045978 21274 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 36.677 36.582 9.612 8.9279 0 0 19.564 9.0357 9 9 0 0 19 9 1 1 0 0 1 1 1872 3913 1934 3780 9167 10560 10560 1 EAAPDTGAEPSPEDSDPTYSSK Unmodified 2249.9448 0.94479571 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 1.5 0.5 1 1 49.073 49.073 3 4.3349E-15 14715 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.762 76.402 9.612 8.9279 19 0 19.344 15.438 9 9 19 0 19 15 1 1 1 0 1 1 8629.6 3914 2701 3781 9168;9169 10561;10562 10561 2 EAAPVIK Unmodified 726.42759 0.42759012 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 5 0 1 45.764 45.764 2 0.037283 13911 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.462 31.702 59.552 54.839 43.63 57.276 70.779 116.31 56 56 46 56 74 111 1 1 1 1 1 1 3971.9 3915 1142 3782 9170 10563 10563 1 EAAQALLLAELR Unmodified 1296.7402 0.74015049 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 13 0 1 75.935 75.935 2 2.4872E-05 28897 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.845 49.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3916 2790 3783 9171 10564 10564 1 EAAQEAVK Unmodified 844.42905 0.42904669 2719;218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UZ48;Q8VHM5;A2AW41;F7B5B5 Syncrip;Hnrnpr Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 0 6.67 4.5 1 1 1 36.657 36.657 2 0.0074134 9950 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.52 36.606 48.352 162.79 123.06 222.59 153.48 252.53 46 158 120 213 158 241 1 2 1 2 1 2 14395 3917 218;2719 3784 9172;9173;9174 10565;10566;10567 10566 3 EAAQMDMVNDGVEDLR Oxidation (M) 1807.7717 0.77166291 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 0 1 0 1.5 0.5 1 1 55.389 55.389 3 2.9217E-05 18525 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.983 68.169 60.805 37.38 28.126 19.17 95.09 38.063 57 38 28 19 93 38 3 2 2 1 3 2 9868 3918 1414 3785 9175;9176 10568;10569;10570;10571 10570 97 4 EAAQMDMVNDGVEDLR Unmodified 1791.7767 0.77674829 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 0 0 0 1.75 0.433 1 3 62.991 62.991 2;3 7.5243E-09 21069 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.58 95.347 29.741 75.926 48.145 69.541 17.805 40 28 74 47 65 19 38 2 4 2 3 1 2 48144 3919 1414 3785 9177;9178;9179;9180 10572;10573;10574;10575 10572 4 EAASELLMR Unmodified 1018.5117 0.51173046 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 4.5 0.5 1 1 55.351 55.351 2 0.0011209 18548 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.81 54.378 127.54 77.376 139.73 120.83 106.6 115.28 120 83 139 120 111 111 1 1 1 1 1 1 16500 3920 2148 3786 9181;9182 10576;10577 10577 2 EAASGVTVTVTGPPAAPAPAPAPPAPAAPAPGTLSK Unmodified 3186.6925 0.6924786 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 6 0 1 68.739 68.739 5 1.094E-07 24158 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.903 35.02 0 29.18 36.625 37.226 54.87 58.13 0 28 37 37 56 56 0 1 1 1 1 1 5116.2 3921 1025 3787 9183 10578 10578 1 EAATSNLKK Unmodified 960.52401 0.52400971 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 1 7 0 1 38.57 38.57 3 0.064878 9197 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.334 19.321 192.12 161.14 214.77 162.08 0 229.19 181 167 215 160 0 215 1 1 1 1 0 1 12912 3922 2272 3788 9184 10579 10579 1 EAATVEELNPK Unmodified 1199.6034 0.60338224 637 B7ZNL2;Q78ZA7 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 0 3.5 0.5 1 1 53.116 53.116 2;3 1.4983E-07 17755 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.83 59.706 39.469 0 39.013 18.442 0 59.696 37 0 37 19 0 56 1 0 1 1 0 1 3526.8 3923 637 3789 9185;9186 10580;10581 10581 2 EAAVPDAVPDR Unmodified 1138.5619 0.56185177 1250 Q80UE5;O70318 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 2 0 1 45.572 45.572 2 0.00077643 14187 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.288 53.258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3924 1250 3790 9187 10582 10582 1 EAAVSVQEESDLEK Unmodified 1532.7206 0.72059684 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 2 0 1 54.393 54.393 3 0.00070894 18111 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.709 43.969 9.5399 0 19.686 18.501 0 9.594 9 0 19 18 0 9 1 0 1 1 0 1 1268.9 3925 539 3791 9188 10583 10583 1 EAAWAISNLTISGR Unmodified 1487.7732 0.77324153 1188;75 O35343;A0A0B4J1E7;O35344 Kpna4;Kpna3 Importin subunit alpha-3;Importin subunit alpha-4 no no 0 0 0 0 10.5 2.5 1 1 72.509 72.509 2;3 0.0016499 24427 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.501 31.583 0 0 0 79.361 80.872 66.982 0 0 0 74 83 65 0 0 0 1 1 1 6147.7 3926 75;1188 3792 9189;9190 10584;10585 10584 2 EAAYQAGLASPENSEQLIIALEPEAASIYCR Unmodified 3363.6293 0.629286 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 7 3.54 1 1 1 1 91.604 91.604 4 5.2452E-13 33959 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.203 56.976 0 39.368 0 0 3 29.254 0 37 0 0 3 28 0 1 0 0 1 2 13778 3927 2585 3793 9191;9192;9193;9194 10586;10587;10588;10589 10586 4 EACDQHGPDIYPK Unmodified 1528.6616 0.66164217 1528 P36552 Cpox Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 44.535 44.535 3 0.033061 14166 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.511 17.848 0 0 0 0 27.265 86.918 0 0 0 0 28 84 0 0 0 0 1 2 3909.7 3928 1528 3794 9195;9196 10590;10591 10590 2 EACPELDYFVAFSSVSCGR Unmodified 2192.9507 0.95068991 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 1 85.155 85.155 3 0.041463 31853 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.659 20.192 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1914.3 3929 1412 3795 9197 10592 10592 1 EADDESLDEQASASK Unmodified 1593.6642 0.66420417 430 A2A6Q3;A2A6Q2;Q9JM96 Cdc42ep4 Cdc42 effector protein 4 yes no 0 0 0 0 1 0 1 45.454 45.454 3 2.461E-05 13268 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.4 95.596 58.53 44.923 43.421 86.368 93.762 0 55 46 46 83 93 0 2 1 1 2 1 0 10995 3930 430 3796 9198 10593;10594 10593 2 EADDIVNWLK Unmodified 1201.5979 0.59790293 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 8.67 3.09 1 1 1 79.343 79.343 3 0.00068485 29190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.338 46.645 29.532 75.179 93.645 27.815 0 0 28 74 92 28 0 0 1 2 2 1 0 0 6863.2 3931 1331 3797 9199;9200;9201 10595;10596;10597 10595 3 EADEQLVAEVIEK Unmodified 1471.7406 0.740604 1033 F8VQ95;Q6Y685;A0A1B0GR30;A0A1B0GRF4 Tacc1 Transforming acidic coiled-coil-containing protein 1 yes no 0 0 0 0 3 0 1 75.794 75.794 3 0.037271 28545 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.55 17.169 0 20.216 0 9.2942 28.861 0 0 19 0 9 28 0 0 1 0 1 1 0 834.11 3932 1033 3798 9202 10598 10598 1 EADESLNFEEQILEAAK Unmodified 1934.9109 0.91091681 1450 P26039 Tln1 Talin-1 yes yes 0 0 0 0 4 0 1 84.064 84.064 3 0.00021812 31914 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.09 35.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3933 1450 3799 9203 10599 10599 1 EADIDGDGQVNYEEFVQMMTAK Unmodified 2489.0727 0.072655535 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;G3UX57 Calm1;Calm3 yes no 0 0 0 0 7.33 3.5 2 5 3 1 4 91.523 91.523 3;4 1.8954E-22 34307 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.53 107.6 546.63 158.38 192.9 218.75 330.52 489.02 512 166 184 207 329 467 20 9 10 11 14 17 271590 3934 1340 3800 9204;9205;9206;9207;9208;9209;9210;9211;9212;9213;9214;9215;9216;9217;9218 10600;10601;10602;10603;10604;10605;10606;10607;10608;10609;10610;10611;10612;10613;10614;10615;10616;10617;10618;10619;10620;10621;10622;10623;10624;10625;10626 10613 27 EADIDGDGQVNYEEFVQMMTAK Oxidation (M) 2505.0676 0.067570157 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;G3UX57 Calm1;Calm3 yes no 0 0 1 0 7 3.46 3 1 88.804 88.804 3;4 2.5654E-09 34550 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.644 51.389 50.102 18.196 48.818 19.144 29.288 20.254 47 19 46 18 28 19 2 1 2 1 1 1 8344 3935 1340 3800 9219;9220;9221;9222 10627;10628;10629;10630 10628 71;72 4 EADIDGDGQVNYEEFVQMMTAK Oxidation (M);Deamidation (N) 2506.0516 0.051585742 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;G3UX57 Calm1;Calm3 yes no 0 1 1 0 5 0 2 90.002 90.002 4 1.3185E-11 34525 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.644 57.716 39.395 16.94 37.083 38.965 19.062 4.7861 37 19 37 38 19 5 2 2 2 2 1 1 2250.8 3936 1340 3800 9223;9224 10631;10632 10632 415 71;72 2 EADIDGDGQVNYEEFVQMMTAK Deamidation (N) 2490.0567 0.05667112 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;G3UX57 Calm1;Calm3 yes no 0 1 0 0 5 0 1 94.188 94.188 4 2.8001E-11 35192 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.001 62.182 7.4087 6.7569 11.459 0 8.1197 7.2303 7 7 11 0 8 7 1 1 1 0 1 1 629.66 3937 1340 3800 9225 10633 10633 415 1 EADIQNFTSFISK Unmodified 1498.7304 0.73037367 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 79.186 79.186 2;3 3.0002E-06 28295 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.494 56.64 0 48.03 83.73 95.986 35.758 48.016 0 46 84 93 37 46 0 1 2 2 1 1 7084.7 3938 1541 3801 9226;9227;9228 10634;10635;10636 10635 3 EADKAAAAK Unmodified 873.4556 0.45559579 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 5 0 1 35.233 35.233 3 0.02891 8877 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.632 26.648 87.406 200.85 107.61 0 290.19 169.74 83 196 111 0 283 167 1 1 1 0 1 1 9408.5 3939 2769 3802 9229 10637 10637 1 EADLDFAR Unmodified 935.43486 0.43486035 1192 O35382 Exoc4 Exocyst complex component 4 yes yes 0 0 0 0 3 0 1 52.318 52.318 2 0.048077 17760 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.42 21.506 48.765 65.129 44.428 26.731 65.142 47.177 46 65 46 28 65 46 1 1 1 1 1 1 4891.4 3940 1192 3803 9230 10638 10638 1 EADYVAHATQLR Unmodified 1372.6735 0.67352749 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 0 4.5 0.5 1 1 45.088 45.088 3 5.5189E-09 13928 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.72 80 0 29.343 72.867 37.46 73.376 67.196 0 28 74 37 74 65 0 1 2 1 1 1 14084 3941 241 3804 9231;9232 10639;10640 10639 2 EAEAAIYHLQLFEELR Unmodified 1930.9789 0.97887721 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 5.5 0.5 1 1 78.06 78.06 3 3.0795E-05 29222 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.339 73.246 80.012 56.203 30.145 61.817 25.744 173 75 56 28 57 28 167 3 2 1 2 1 4 12559 3942 1609 3805 9233;9234 10641;10642;10643;10644 10641 4 EAEADDVLR Unmodified 1016.4775 0.47745344 472 A2AIS0;A2AIR9;A2AIR7;O55017 Cacna1b Voltage-dependent N-type calcium channel subunit alpha-1B yes no 0 0 0 0 1 0 1 44.211 44.211 2 0.0065432 12655 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.906 33.778 49.012 35.596 27.913 0 27.301 57.851 46 37 28 0 28 55 1 1 1 0 1 1 10127 3943 472 3806 9235 10645 10645 1 EAEAGAAAVGPSR Unmodified 1184.5786 0.57856447 2656 Q8R307 Vps18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 0 2.5 0.5 1 1 35.483 35.483 2;3 0.00014138 9883 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.705 50.468 30.044 20.216 0 0 19.874 39.442 28 19 0 0 19 37 1 1 0 0 1 1 3373.2 3944 2656 3807 9236;9237 10646;10647 10647 2 EAEAQAAMEANSEGSLTRPK Deamidation (N) 2089.9586 0.95861206 1767 P63040 Cplx1 Complexin-1 yes yes 0 1 0 1 3 0 1 49.765 49.765 3 1.0224E-06 16588 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.636 52.804 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3945 1767 3808 9238 10648 10648 701 1 EAEAQAAMEANSEGSLTRPK Unmodified 2088.9746 0.97459647 1767 P63040 Cplx1 Complexin-1 yes yes 0 0 0 1 8 4 1 1 50.464 50.464 3;4 2.7278E-10 16557 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.765 72.984 69.399 35.28 28.241 39.342 27.029 78.113 65 38 28 38 28 74 2 2 1 2 1 2 5974.2 3946 1767 3808 9239;9240 10649;10650 10649 2 EAEASAPVVQEESSINR Unmodified 1814.8646 0.86463532 2303 Q80TL4 Kiaa1045 Protein KIAA1045 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 48.046 48.046 3 3.3555E-52 14264 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 184.48 162.59 35.201 41.404 54.455 18.5 47.671 43.412 33 42 53 19 47 42 2 3 2 1 2 2 46486 3947 2303 3809 9241;9242;9243;9244 10651;10652;10653;10654 10651 4 EAEASAPVVQEESSINR Deamidation (N) 1815.8487 0.8486509 2303 Q80TL4 Kiaa1045 Protein KIAA1045 yes yes 0 1 0 0 1 0 1 49.537 49.537 3 8.9138E-27 14798 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.78 80.646 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3948 2303 3809 9245 10655 10655 908 1 EAEAVVEPK Unmodified 970.49713 0.49712625 1853 P97467;E9Q704 Pam Peptidyl-glycine alpha-amidating monooxygenase;Peptidylglycine alpha-hydroxylating monooxygenase;Peptidyl-alpha-hydroxyglycine alpha-amidating lyase yes no 0 0 0 0 3 0 1 45.673 45.673 2 0.0061189 14669 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.296 49.075 0 0 0 19.879 47.203 0 0 0 0 19 46 0 0 0 0 1 1 0 1180.8 3949 1853 3810 9246 10656 10656 1 EAECVEADSGR Unmodified 1221.4932 0.49317986 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Krt86;5430421N21Rik;Krt81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 no no 0 0 0 0 13 0 1 32.374 32.374 2 9.8211E-06 7743 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.52 78.816 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4414.3 + 3950 648 3811 9247 10657 10657 1 EAEDGFR Unmodified 822.3508 0.35079637 2133;3350 Q61644;Q9WVE8;Q3UP40 Pacsin1;Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 1;Protein kinase C and casein kinase substrate in neurons protein 2 no no 0 0 0 0 1 0 1 34.849 34.849 2 0.055109 9018 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.189 55.712 29.577 36.581 47.428 0 0 69.29 28 37 46 0 0 65 1 1 1 0 0 1 6529.6 3951 2133;3350 3812 9248 10658 10658 1 EAEDGFRK Unmodified 950.44576 0.44575938 2133;3350 Q61644;Q9WVE8;Q3UP40 Pacsin1;Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 1;Protein kinase C and casein kinase substrate in neurons protein 2 no no 0 0 0 1 13 0 1 36.507 36.507 3 0.052167 9731 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.968 25.794 0 446.33 541.83 424.71 632.21 516.03 0 428 543 429 640 501 0 1 1 1 1 1 27354 3952 2133;3350 3813 9249 10659 10659 1 EAEDNLRR Unmodified 1001.489 0.48902118 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 2 0.816 1 1 1 25.167 25.167 2;3 0.013587 4627 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.301 42.771 139.61 8.0547 153.99 111.34 81.066 106.69 131 9 148 111 83 102 3 1 3 2 2 1 20482 3953 2441 3814 9250;9251;9252 10660;10661;10662 10660 3 EAEDYELPEEILEK Unmodified 1705.7934 0.79342743 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 0 3 0 1 77.885 77.885 4 0.0062055 29527 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.79 31.884 9.657 0 0 0 19.874 0 9 0 0 0 19 0 1 0 0 0 1 0 691.11 3954 582 3815 9253 10663 10663 1 EAEEEFWQNQHPQPYIFPDSPGGTSFER Unmodified 3321.4639 0.46393523 2932 Q9CQJ8 Ndufb9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 0 0 0 0 4.33 0.471 2 1 73.02 73.02 3;4 9.7421E-19 26788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.45 71.801 20.346 17.102 40.582 0 19.874 39.442 19 18 38 0 19 37 1 2 1 0 1 1 19871 3955 2932 3816 9254;9255;9256 10664;10665;10666 10666 3 EAEEELAASGGQSPTGEQIPQFQQR Unmodified 2686.2471 0.24706616 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 2 0 1 61.051 61.051 4 0.001935 21237 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 37.896 25.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2207.1 3956 581 3817 9257 10667 10667 1 EAEEIRR Unmodified 901.46174 0.4617438 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 1 2 0 1 24.573 24.573 3 0.013919 4751 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.262 22.995 109.15 0 49.222 0 0 69.29 102 0 46 0 0 65 1 0 1 0 0 1 6047.9 3957 1115 3818 9258 10668 10668 1 EAEENDLLEDILGK Unmodified 1586.7675 0.76754703 1897 Q0VF59;Q8BJ42 Dlgap2 Disks large-associated protein 2 yes no 0 0 0 0 4 0 1 89.55 89.55 3 0.00021771 33676 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.93 48.353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3958 1897 3819 9259 10669 10669 1 EAEEQLQK Unmodified 973.47164 0.47163978 3266 Q9QXS1;E9Q3W4;A0A0R4J218 Plec Plectin yes no 0 0 0 0 3 0 1 41.113 41.113 2 0.00019285 12536 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.09 36.524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3959 3266 3820 9260 10670 10670 1 EAEESLQQQQQEQEETLK Unmodified 2173.9975 0.99749998 453 A2AEW8;A2AEW9;Q8VD04;A2AEW6;A2AEW5 Gripap1 GRIP1-associated protein 1 yes no 0 0 0 0 1.5 0.5 1 1 51.77 51.77 3 2.2349E-21 15679 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.095 73.996 29.952 18.196 0 0 9.414 0 28 19 0 0 9 0 1 1 0 0 1 0 1572.9 3960 453 3821 9261;9262 10671;10672 10671 2 EAEETQNSLQAECDQYR Unmodified 2069.8596 0.85962629 529 A2AVJ7;Q99PL5 Rrbp1 Ribosome-binding protein 1 yes no 0 0 0 0 1 0 1 45.689 45.689 3 4.1714E-06 13427 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.035 73.839 20.292 18.848 0 0 0 20.254 19 19 0 0 0 19 1 1 0 0 0 1 2092.7 3961 529 3822 9263 10673 10673 1 EAEEVYR Unmodified 894.40831 0.40831125 922 E9Q715;Q05CX5;Q7TNC4 Luc7l2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 0 1.5 0.5 1 1 34.875 34.875 2 0.025583 9428 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.45 54.733 20.244 28.427 38.365 77.206 73.857 0 19 28 37 74 74 0 1 1 1 2 2 0 15233 3962 922 3823 9264;9265 10674;10675 10675 2 EAEFLQK Unmodified 863.43888 0.43888309 1044 F8WHW6;O70161;P70181 Pip5k1c;Pip5k1b Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma;Phosphatidylinositol 4-phosphate 5-kinase type-1 beta no no 0 0 0 0 5.5 0.5 1 1 54.86 54.86 2;3 0.014243 18339 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.78 33.148 138.26 95.623 141.52 80.347 103 0 130 102 139 83 102 0 1 2 1 1 1 0 9937.1 3963 1044 3824 9266;9267 10676;10677 10676 2 EAEFQQMLEQLK Unmodified 1492.7232 0.7231798 111 A0A0J9YTW6;B1AWN6;F7AMU5;A2ASI5;A2APX8;A2APX9 Scn2a1;Scn3a;Scn1a Sodium channel protein yes no 0 0 0 0 7 0 1 83.913 83.913 3 0.0026165 30479 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.116 37.865 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3964 111 3825 9268 10678 10678 1 EAEKELHEK Unmodified 1111.551 0.55095274 112;3317 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;Q9R1T4 Sept11;Sept6 Septin-11;Septin-6 no no 0 0 0 1 7 3.54 1 1 1 1 36.523 36.523 4 0.002129 8456 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.201 43.69 620.99 602.35 468.88 703.97 1006.2 826.37 582 602 453 675 1020 798 3 3 3 3 4 3 39604 3965 112;3317 3826 9269;9270;9271;9272 10679;10680;10681;10682 10682 4 EAEKLESEHPDQAQAILSR Unmodified 2150.0604 0.060375011 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 3 0 1 50.926 50.926 3 0.0030386 17066 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.704 21.978 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 2077.6 3966 2148 3827 9273 10683 10683 1 EAELAAR Unmodified 758.39227 0.39226725 3277 Q9QYG0;A0A2I3BQR5;A0A2I3BQM5 Ndrg2 Protein NDRG2 yes no 0 0 0 0 2 0 1 33.877 33.877 2 0.011792 8892 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.22 9.5174 198.28 0 217.46 245.24 335.45 168.45 186 0 212 242 337 167 1 0 1 1 1 1 27740 3967 3277 3828 9274 10684 10684 1 EAELDMNEELDKK Unmodified 1562.7134 0.71340297 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 1 4 0 1 57.395 57.395 3 0.0053155 19768 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.196 37.977 0 87.445 51.88 77.79 0 0 0 83 56 74 0 0 0 1 1 1 0 0 5205.6 3968 1760 3829 9275 10685 10685 1 EAELGAR Unmodified 744.37662 0.37661719 1484 P29341;A2A5N3 Pabpc1;Pabpc1l Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 0 2 0 1 32.563 32.563 2 0.032734 8251 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.097 20.81 168.4 95.351 108.98 102.27 144.47 164.31 158 102 111 102 148 158 1 1 1 1 1 1 14037 3969 1484 3830 9276 10686 10686 1 EAELTPENIAAAR Unmodified 1383.6994 0.69940789 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3 0 2 54.599 54.599 2;3 1.0419E-07 18734 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.73 83.463 78.952 0 75.645 151.09 95.452 125.2 74 0 74 144 102 120 1 0 1 2 2 2 38520 3970 510 3831 9277;9278 10687;10688 10688 2 EAELTPENIAAAR Deamidation (N) 1384.6834 0.68342347 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 4 0 1 54.342 54.342 2 0.040456 18475 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.492 40.755 88.43 0 105.75 93.475 99.457 85.64 83 0 102 93 102 83 1 0 1 1 1 1 11257 3971 510 3831 9279 10689 10689 133 1 EAENTANQAGNESPVQELR Unmodified 2055.9457 0.94573918 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 1.5 0.5 1 1 47.05 47.05 3 1.2679E-53 13961 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 161.95 139.58 9.612 18.351 9.1727 0 38.702 0 9 18 9 0 37 0 1 2 1 0 2 0 5661.5 3972 2204 3832 9280;9281 10690;10691 10690 2 EAEPDLLAVLR Unmodified 1224.6714 0.67140222 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 6.6 3.26 1 2 1 1 76.246 76.246 2;3 1.544E-08 28303 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.23 101 176.94 166.25 215.7 197.03 231.09 156.02 166 167 212 196 232 149 3 4 4 5 4 3 70805 3973 3355 3833 9282;9283;9284;9285;9286 10692;10693;10694;10695;10696;10697 10693 6 EAEQEAAR Unmodified 902.40937 0.40937388 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 13 0 1 22.198 22.198 2 0.031599 3299 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.379 27.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 521.88 3974 3266 3834 9287 10698 10698 1 EAESCDCLQGFQLTHSLGGGTGSGMGTLLISK Unmodified 3310.5268 0.52681154 1795;1863;3072 P99024;P68372;Q9D6F9 Tubb5;Tubb4b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 7 0 1 78.367 78.367 5 0.00014654 27883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.986 34.891 99.305 44.192 43.849 125.76 206.01 46.393 93 46 46 121 204 46 2 1 1 2 2 1 11938 3975 1863;1795;3072 3835 9288 10699;10700 10700 2 EAESLIAK Unmodified 859.4651 0.46509784 1823 P80314;A0A1W2P7B7;A0A1W2P828 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 6 0.816 1 1 1 52.944 52.944 3 0.0028707 17358 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.064 10.937 98.959 63.735 85.483 0 121.58 114.86 93 65 83 0 120 111 2 1 2 0 2 2 9608.7 3976 1823 3836 9289;9290;9291 10701;10702;10703 10701 3 EAESSPFVER Unmodified 1149.5302 0.5302173 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 2 0 1 44.315 44.315 2 0.0069591 13617 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.349 34.968 29.952 18.196 0 0 0 39.442 28 19 0 0 0 37 1 1 0 0 0 1 18488 3977 1324 3837 9292 10704 10704 1 EAETFPFNPFDLTK Unmodified 1654.7879 0.78788854 1442 P24270 Cat Catalase yes yes 0 0 0 0 6 0 1 89.445 89.445 3 0.0016936 33737 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.09 35.258 29.749 0 49.622 0 0 20.254 28 0 46 0 0 19 1 0 1 0 0 1 1320 3978 1442 3838 9293 10705 10705 1 EAETFPFNPFDLTK Deamidation (N) 1655.7719 0.77190413 1442 P24270 Cat Catalase yes yes 0 1 0 0 7 0 1 89.682 89.682 3 0.015143 33149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.864 34.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3979 1442 3838 9294 10706 10706 531 1 EAEYFELPELVR Unmodified 1493.7402 0.74021007 221 A0A0R4J2B2;Q6WVG3 Kctd12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 0 4.25 0.829 1 1 2 79.457 79.457 2;3 0.00018775 30045 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.593 54.475 30.044 0 0 55.604 0 59.696 28 0 0 53 0 56 1 0 0 3 0 1 18339 3980 221 3839 9295;9296;9297;9298 10707;10708;10709;10710 10707 4 EAEYFQLPDLVK Unmodified 1450.7344 0.73439641 2043 Q5DTY9 Kctd16 BTB/POZ domain-containing protein KCTD16 yes yes 0 0 0 0 5.5 0.5 1 1 81.272 81.272 3 0.00020959 30051 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.624 33.963 99.258 66.621 32.863 118.77 89.912 136.01 93 65 37 112 93 130 3 1 1 3 2 3 7626.5 3981 2043 3840 9299;9300 10711;10712;10713 10713 3 EAFEISK Unmodified 822.41233 0.41233399 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 7.75 3.11 1 1 1 1 55.417 55.417 2 0.025835 18651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.15 33.117 3179.2 2916.3 3861.8 3336.3 3833.1 4355 2998 3003 3883 3329 3954 4188 6 6 6 6 6 6 271670 3982 1797 3841 9301;9302;9303;9304 10714;10715;10716;10717;10718;10719 10715 6 EAFENGLWGK Deamidation (N) 1150.5295 0.52948901 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 1 0 0 5 0 1 70.214 70.214 3 0.0096648 25470 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.37 24.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3983 2633 3842 9305 10720 10720 958 1 EAFLEHLK Unmodified 985.52328 0.52328142 504 D3Z781;E9QAU4;A2AQ25;Q8BHR1;B1AY50;B1AY49 Etl4;Skt Sickle tail protein yes no 0 0 0 0 7 0 1 58.176 58.176 3 0.025071 18367 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.346 30.721 39.468 46.283 0 0 29.288 0 37 46 0 0 28 0 1 1 0 0 1 0 2817.2 3984 504 3843 9306 10721 10721 1 EAFLNGGDGHK Deamidation (N) 1144.5149 0.51490158 2663 Q8R464 Cadm4 Cell adhesion molecule 4 yes yes 0 1 0 0 4.33 0.471 2 1 46.99 46.99 3 0.0034807 14731 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.395 40.541 89.059 0 0 101.65 0 89.544 83 0 0 93 0 84 2 0 0 2 0 2 6409.3 3985 2663 3844 9307;9308;9309 10722;10723;10724 10722 961 3 EAFLNTEDKGDSLDSVEALIK Unmodified 2293.1325 0.1325369 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 8.17 3.48 2 1 1 2 81.039 81.039 3;4;5 5.5057E-14 30718 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.46 75.114 464.58 442.75 405.47 472.35 373.32 226.09 436 445 409 457 370 214 5 5 4 6 5 3 122600 3986 551 3845 9310;9311;9312;9313;9314;9315 10725;10726;10727;10728;10729;10730;10731;10732 10727 8 EAFNMIDQNR Unmodified 1236.5557 0.55572054 1923 Q3THE2;Q6ZWQ9;D3YV37;Q9CQ19;D3Z249 Myl12b;Myl12a;Myl9 Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 5 0 1 55.538 55.538 2 0.0073124 18622 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.334 38.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3987 1923 3846 9316 10733 10733 1 EAFQDDPR Unmodified 976.42502 0.42502394 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 2.5 0.5 1 1 37.865 37.865 2 0.017191 10873 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.438 23.261 88.303 25.869 105.14 72.513 111.82 58.141 83 28 102 74 112 56 2 1 2 2 2 1 11325 3988 823 3847 9317;9318 10734;10735 10734 2 EAFQEALAAAGDK Unmodified 1319.6357 0.635745 1346 P10639 Txn Thioredoxin yes yes 0 0 0 0 7.6 2.8 1 1 2 1 69.44 69.44 2;3 3.4227E-19 25522 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.74 98.052 276.12 249.09 328.03 315.36 392.75 316.13 259 250 325 305 398 305 5 5 5 5 6 5 112650 3989 1346 3848 9319;9320;9321;9322;9323 10736;10737;10738;10739;10740;10741;10742;10743 10743 8 EAFQLFDR Unmodified 1024.4978 0.49779495 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605 Myl6 Myosin light polypeptide 6 yes no 0 0 0 0 6 0 1 66.885 66.885 2 0.0083049 23282 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.19 39.628 0 76.366 141.79 90.445 146.4 123.74 0 74 139 93 148 120 0 1 1 1 1 1 18811 3990 316 3849 9324 10744 10744 1 EAFQNAYLELGGLGER Deamidation (N) 1766.8475 0.84752869 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 0 4 0 1 76.451 76.451 3 0.00066533 28324 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.107 45.712 0 20.216 0 9.837 0 9.594 0 19 0 9 0 9 0 1 0 1 0 1 2319.6 3991 106 3850 9325 10745 10745 37 1 EAFQNAYLELGGLGER Unmodified 1765.8635 0.8635131 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8.29 3.1 1 2 1 1 2 76.824 76.824 2;3 5.3237E-09 27102 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.73 79.156 326.75 222.3 198.27 243.66 236.74 299.43 306 224 194 232 241 286 8 7 5 6 6 8 125290 3992 106 3850 9326;9327;9328;9329;9330;9331;9332 10746;10747;10748;10749;10750;10751;10752;10753;10754;10755 10750 10 EAFSLFDK Unmodified 955.4651 0.46509784 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;Q9D6P8 Calm1;Calml3 Calmodulin-like protein 3 yes no 0 0 0 0 9.25 2.28 1 1 1 1 72.451 72.451 2 0.0012369 24561 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.78 49.489 1035.2 590.93 616.03 894.21 771.73 934.37 971 610 630 865 777 890 5 3 3 4 3 4 143100 3993 1340 3851 9333;9334;9335;9336 10756;10757;10758;10759;10760 10758 5 EAFSLFDKDGDGTITTK Unmodified 1843.884 0.88397377 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 0 0 1 8.71 2.4 3 4 3 2 1 1 3 70.662 70.662 3;4;5 8.2152E-39 24942 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 159.19 140.16 5950.5 4681.2 7812.7 5861.4 4968.7 5666.4 5606 4802 7727 5838 5074 5414 18 20 22 22 18 17 2222300 3994 1340 3852 9337;9338;9339;9340;9341;9342;9343;9344;9345;9346;9347;9348;9349;9350;9351;9352;9353 10761;10762;10763;10764;10765;10766;10767;10768;10769;10770;10771;10772;10773;10774;10775;10776;10777;10778;10779;10780;10781;10782;10783;10784;10785;10786 10761 26 EAGDEFELR Unmodified 1064.4775 0.47745344 467 A2AHX9;Q9QWX2;Q64373 Bcl2l1 Bcl-2-like protein 1 yes no 0 0 0 0 2 0.816 1 1 1 51.527 51.527 2 0.0041823 15579 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.639 36.742 49.063 29.792 86.525 39.373 121.78 86.623 46 28 83 37 121 83 1 1 2 1 2 1 19266 3995 467 3853 9354;9355;9356 10787;10788;10789 10787 3 EAGDVCYADVYR Unmodified 1416.598 0.59797928 1130 H7BX95;Q6PDM2;F7AI47 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 8 5 1 1 51.723 51.723 2 1.0824E-22 17623 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 166.69 142.92 59.852 0 39.732 78.766 169.07 58.081 56 0 37 74 167 56 1 0 1 1 2 1 22747 3996 1130 3854 9357;9358 10790;10791 10790 2 EAGENWQENPETYEDSFYK Unmodified 2334.9553 0.95530082 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 2.5 0.5 1 1 68.478 68.478 3 3.9054E-06 25158 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.617 54.122 0 14.896 0 0 9.414 0 0 14 0 0 9 0 0 1 0 0 1 0 909.61 3997 882 3855 9359;9360 10792;10793 10793 2 EAGENWQENPETYEDSFYK Deamidation (N) 2335.9393 0.9393164 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 1 0 0 3 0 1 68.431 68.431 4 1.6665E-05 25204 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.893 51.803 50.431 0 0 0 38.044 19.168 47 0 0 0 37 19 1 0 0 0 1 1 1728.4 3998 882 3855 9361 10794 10794 240 1 EAGEQVASSPAEVAEK Unmodified 1600.758 0.75804498 2852 Q99L13 Hibadh 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 6.67 4.5 1 1 1 48.704 48.704 3 1.8737E-05 16119 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.774 64.965 205.81 229.62 200.29 101.91 235.16 239.54 194 232 203 102 232 231 3 3 3 2 2 3 25263 3999 2852 3856 9362;9363;9364 10795;10796;10797 10795 3 EAGFLRPVTIFGPIADVAR Unmodified 2028.1156 0.11564547 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 1 10 0 1 81.56 81.56 3 0.022768 25800 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.276 22.782 29.642 36.76 36.444 27.728 37.428 0 28 37 37 28 37 0 1 1 1 1 1 0 3580 4000 640 3857 9365 10798 10798 1 EAGFPPGVVNIVPGFGPTAGAAIASHEGVDK Unmodified 2960.5032 0.50322127 1562 P47738;A0A0G2JEU1 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 80.856 80.856 4 0.00029474 29129 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.4 26.307 39.613 17.545 0 0 29.288 0 37 19 0 0 28 0 1 1 0 0 1 0 3188.5 4001 1562 3858 9366 10799 10799 1 EAGGAFGK Unmodified 735.35515 0.35515346 827 E9PV44;O35143 Atpif1 ATPase inhibitor, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 43.103 43.103 2 0.0038742 11501 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.17 112.17 843.91 547.31 708.33 69.515 807.25 66.969 793 579 685 65 777 65 2 2 1 1 2 1 80543 4002 827 3859 9367;9368;9369 10800;10801;10802 10800 3 EAGGGGVGGPGAK Unmodified 1012.4938 0.49377221 128 A0A0N4SWH2;A0A0N4SV32;Q3UMP4;Q9CY58;A0A0N4SUQ1;A0A0N4SUN8 Serbp1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 0 8 3.56 1 1 1 35.829 35.829 3 0.0016502 9206 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.567 17.858 206.77 114.77 137.14 164.43 64.201 136.75 194 120 139 157 65 130 3 2 2 2 1 2 12010 4003 128 3860 9370;9371;9372 10803;10804;10805 10803 3 EAGHGPGKDEMTDEELAEGEEEIDHAER Oxidation (M) 3095.2898 0.28979519 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 1 1 1 0 1 51.509 51.509 5 3.7443E-18 15608 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.429 71.925 29.802 47.998 0 0 0 29.848 28 47 0 0 0 28 1 1 0 0 0 1 4616 4004 487 3861 9373 10806 10806 23 1 EAGHGPGKDEMTDEELAEGEEEIDHAER Unmodified 3079.2949 0.29488057 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 1 1 0 1 54.938 54.938 5 4.706E-08 17081 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.854 50.205 48.426 73.899 94.026 43.147 81.181 106.42 46 74 93 46 83 102 1 1 1 1 1 1 22411 4005 487 3861 9374 10807 10807 1 EAGHGTQKEEIPEEELAEDVEEIDHAER Unmodified 3188.4382 0.43817399 1096;333 G5E829;A0A1W2P6X7;A0A1W2P882 Atp2b1 Plasma membrane calcium-transporting ATPase 1 no no 0 0 0 1 1 0 2 64.054 64.054 4;5 3.7138E-36 21610 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 128.06 120.3 69.468 74.629 29.112 100.69 59.288 156.08 65 75 28 93 65 148 1 2 1 2 2 3 46236 4006 1096;333 3862 9375;9376 10808;10809;10810 10809 3 EAGITEK Unmodified 746.38103 0.38103386 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 39.874 39.874 2;3 0.018317 11052 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.682 22.235 574.87 514.33 329.21 286.74 389.72 390.76 540 525 334 287 398 377 4 4 3 3 3 3 64592 4007 1405 3863 9377;9378;9379;9380;9381 10811;10812;10813;10814;10815 10815 5 EAGPEGAHGR Unmodified 979.44716 0.44715637 2233 Q6PAM1;A8Y5J8;A2ADZ3;A2ADZ4;A2ADZ2 Txlna Alpha-taxilin yes no 0 0 0 0 1 0 1 18.348 18.348 3 0.0014434 2806 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.399 24.27 0 3.192 0 0 5.23 0 0 3 0 0 5 0 0 1 0 0 1 0 406.89 4008 2233 3864 9382 10816 10816 1 EAGPRPPGSGPGPGPTPGAK Unmodified 1782.9013 0.90129559 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 5.5 0.5 1 1 40.136 40.136 3 1.0215E-08 10764 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.793 47.093 29.904 27.776 0 30.256 18.484 0 28 28 0 28 19 0 1 1 0 1 1 0 3400 4009 1275 3865 9383;9384 10817;10818 10818 2 EAGSIVR Unmodified 730.39735 0.39735263 407;690;767 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;E9PXG2;J3QMR8;D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8;S4R2T8 Dlg4;Dlg2;Dlg1 Disks large homolog 4;Disks large homolog 2;Disks large homolog 1 no no 0 0 0 0 13 0 1 33.25 33.25 2 0.0254 8151 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.67 50.551 158.8 0 0 176.12 166.59 0 148 0 0 164 167 0 1 0 0 1 1 0 12968 4010 407;690;767 3866 9385 10819 10819 1 EAGSVSLR Unmodified 817.42938 0.42938104 551 A3KGU7;A3KGU9;P16546 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.5 0.5 1 1 36.996 36.996 2 0.011497 10183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.195 32.224 0 415.34 648.09 582.89 602.58 679.97 0 399 646 579 624 654 0 1 2 2 2 2 79070 4011 551 3867 9386;9387 10820;10821 10821 2 EAGVEMDDEEDLSTPNEK Oxidation (M) 2022.8212 0.8211751 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 1 0 1 0 1 50.507 50.507 3 0.00012905 15179 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.658 52.065 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 2828.2 4012 2803 3868 9388 10822 10822 183 1 EAGVEMDDEEDLSTPNEK Unmodified 2006.8263 0.82626048 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 1.33 0.471 2 1 56.46 56.46 3;4 2.7053E-09 19215 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.468 67.271 29.839 45.881 19.335 0 37.714 28.772 28 47 19 0 37 28 1 2 1 0 1 1 9217 4013 2803 3868 9389;9390;9391 10823;10824;10825 10825 3 EAGVFVPR Unmodified 873.47085 0.47085192 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 5 0 1 49.241 49.241 2 0.054033 15609 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.999 19.535 0 0 47.696 46.601 44.335 47.771 0 0 46 46 46 46 0 0 1 1 1 1 5890 4014 2020 3869 9392 10826 10826 1 EAGYTEFTGPPQKPPR Unmodified 1773.8686 0.86859848 3261 Q9QVP9;E9Q2A6 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 5.5 0.5 1 1 50.334 50.334 3 7.691E-05 16181 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.856 67.457 49.128 75.423 0 79.512 72.819 57.618 46 74 0 74 75 56 1 2 0 2 2 2 6794.9 4015 3261 3870 9393;9394 10827;10828 10827 2 EAHAQALQDR Unmodified 1137.5527 0.55268407 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 3 0 1 25.788 25.788 3 0.040726 5469 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.564 17.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4016 2559 3871 9395 10829 10829 1 EAHDAFR Unmodified 844.38277 0.3827652 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.5 0.5 2 2 26.087 26.087 2;3 0.0079091 5733 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.116 42.022 39.238 182.18 146.09 65.565 63.649 38.693 37 176 148 65 65 37 1 4 4 2 2 1 137580 4017 551 3872 9396;9397;9398;9399 10830;10831;10832;10833 10831 4 EAHSDDNPSEGDGAVK Unmodified 1626.6758 0.67577191 1037 F8VQN6;Q8R4H2 Arhgef12 Rho guanine nucleotide exchange factor 12 yes no 0 0 0 0 1 0 1 33.159 33.159 3 2.992E-05 8192 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.197 43.168 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 2739.4 4018 1037 3873 9400 10834 10834 1 EAHSDDNPSEGDGAVK Deamidation (N) 1627.6598 0.6597875 1037 F8VQN6;Q8R4H2 Arhgef12 Rho guanine nucleotide exchange factor 12 yes no 0 1 0 0 2 0 1 33.491 33.491 3 0.0017151 8722 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.827 38.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4019 1037 3873 9401 10835 10835 272 1 EAHVDVK Unmodified 796.40792 0.40791731 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 6.25 3.96 1 1 1 1 34.208 34.208 3 0.006184 8327 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.064 57.539 1339.8 618.57 798.07 831.9 1451.9 1230.3 1256 641 793 807 1465 1193 4 3 3 3 4 4 97806 4020 3397 3874 9402;9403;9404;9405 10836;10837;10838;10839 10839 4 EAICEVALDYK Unmodified 1309.6224 0.62240312 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 5 0.816 1 1 1 66.854 66.854 2 4.7358E-08 23210 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.67 81.925 48.695 83.029 119.62 112.17 107.65 96.066 46 83 120 111 111 93 1 2 2 2 2 2 12580 4021 2148 3875 9406;9407;9408 10840;10841;10842 10842 3 EAICEVALDYKK Unmodified 1437.7174 0.71736614 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 1 7 0 1 61.379 61.379 3 0.045319 19913 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.03 12.158 59.491 43.878 63.104 96.388 79.759 76.608 56 46 65 93 83 74 1 1 1 1 1 1 5018.6 4022 2148 3876 9409 10843 10843 1 EAIDAAGEGGR Unmodified 1044.4836 0.48360145 76 A0A0D2X7Z2;Q9CY45 N6amt2 Protein-lysine N-methyltransferase N6amt2 yes no 0 0 0 0 1 0 1 35.707 35.707 2 0.001854 9370 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.862 51.021 0 29.792 0 39.943 26.454 29.093 0 28 0 37 28 28 0 1 0 1 1 1 2321.8 4023 76 3877 9410 10844 10844 1 EAIDSYIK Unmodified 937.47566 0.47566253 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.83 2.91 1 1 2 1 1 58.123 58.123 2;3 0.0024612 19137 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.942 46.833 439.2 418.37 694.07 471.48 602.67 518.24 414 408 686 475 610 497 3 5 7 6 6 4 252030 4024 2185 3878 9411;9412;9413;9414;9415;9416 10845;10846;10847;10848;10849;10850;10851;10852 10848 8 EAIETIVAAMSNLVPPVELANPENQFR Unmodified 2951.5063 0.50625774 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 10.8 1.33 1 1 2 1 113.95 113.95 3;4 7.1592E-17 44788 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.678 57.27 0 9.3361 8.0462 5.1563 6 14.33 0 9 8 5 6 14 0 2 2 1 1 2 11636 4025 1772 3879 9417;9418;9419;9420;9421 10853;10854;10855;10856;10857;10858;10859 10859 7 EAIGAVIHYLLQVGPEK Unmodified 1836.0145 0.014534437 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 12 0.816 2 2 2 93.142 93.142 3;4 1.2381E-08 37079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.22 85.631 160.47 76.43 96.893 92.081 256.05 137.49 150 74 93 91 251 130 5 2 2 4 5 3 87545 4026 3355 3880 9422;9423;9424;9425;9426;9427 10860;10861;10862;10863;10864;10865;10866;10867 10867 8 EAIGPDGEVVNR Unmodified 1254.6204 0.62042929 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 2.5 0.5 1 1 44.782 44.782 2 5.9249E-05 13832 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.113 68.493 9.5583 19.571 30.296 20.767 19.874 0 9 19 28 19 19 0 1 1 1 1 1 0 5882.7 4027 2226 3881 9428;9429 10868;10869 10868 2 EAILAIHK Unmodified 893.53345 0.53345218 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 yes no 0 0 0 0 9.25 2.28 1 1 1 1 52.435 52.435 3 0.0021074 15793 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.253 44.399 69.016 374.1 320.33 291.81 359.57 502.49 65 361 325 278 364 481 1 3 3 3 3 4 42618 4028 310 3882 9430;9431;9432;9433 10870;10871;10872;10873 10870 4 EAILNDEIYCPPETAVLLASYAVQAK Unmodified 2877.447 0.44701152 1453 P26043;Q7TSG6 Rdx Radixin yes no 0 0 0 0 6.5 0.5 1 1 98.468 98.468 4 7.7274E-17 36875 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.226 55.677 7.511 0 0 9 14.644 0 7 0 0 9 14 0 1 0 0 1 1 0 1730.8 4029 1453 3883 9434;9435 10874;10875 10874 2 EAINQGMDEELER Unmodified 1532.6777 0.67768617 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 2 0 1 52.166 52.166 2 6.3169E-09 17189 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.688 68.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4030 3016 3884 9436 10876 10876 1 EAINQGMDEELERDEK Oxidation (M) 1920.8371 0.83709994 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 1 1 1.67 0.471 1 2 44.53 44.53 3;4 0.00016633 13793 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.529 53.508 29.904 47.016 58.356 30.604 0 39.442 28 47 55 28 0 37 1 2 1 1 0 1 15903 4031 3016 3885 9437;9438;9439 10877;10878;10879 10878 190 3 EAINQGMDEELERDEK Unmodified 1904.8422 0.84218531 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 1 2.5 1.12 1 1 1 1 52.708 52.708 3;4 1.0728E-50 17828 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 182.15 156.99 305.14 164.37 370.94 136.88 216.86 287.75 287 170 359 136 213 275 3 2 4 3 2 3 78626 4032 3016 3885 9440;9441;9442;9443 10880;10881;10882;10883 10882 4 EAINQGMDEELERDEK Deamidation (N) 1905.8262 0.8262009 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 1 0 1 1 0 1 55.329 55.329 3 0.0042912 17546 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.859 31.721 0 19.743 47.553 47.508 54.727 48.54 0 19 47 47 56 47 0 1 2 2 2 2 3038.3 4033 3016 3885 9444 10884;10885 10885 1048 2 EAINVEQAFQTIAR Unmodified 1588.8209 0.82092001 1600 P51150 Rab7a Ras-related protein Rab-7a yes yes 0 0 0 0 8.33 3.3 2 1 75.899 75.899 2;3 4.9951E-05 28665 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.45 67.446 98.681 149.6 136.36 102.39 136.06 164.55 93 149 139 102 139 158 2 3 3 2 2 3 31149 4034 1600 3886 9445;9446;9447 10886;10887;10888 10888 3 EAIPEEQELDFR Unmodified 1474.694 0.69398816 2875 Q99MR1 Gigyf1 PERQ amino acid-rich with GYF domain-containing protein 1 yes yes 0 0 0 0 2 0 1 62.515 62.515 2 0.0011018 21987 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.434 56.543 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1175.8 4035 2875 3887 9448 10889 10889 1 EAIQATAR Unmodified 858.45593 0.45593014 1937 Q3TVK3;Q9Z2W0;Q8BPW9;A0A087WS31;A0A087WSE6;A0A087WNX3;A0A087WSD3;A0A087WRC1;A0A087WSU0 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 5 0 1 32.271 32.271 2 0.013657 7431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.833 19.84 48.999 0 60.345 0 0 0 46 0 56 0 0 0 1 0 1 0 0 0 3708 4036 1937 3888 9449 10890 10890 1 EAIQHPADEK Unmodified 1136.5462 0.54620171 2800 Q921M7;A0A2I3BRN5;A0A2I3BPH9;A0A2I3BQK1 Fam49b Protein FAM49B yes no 0 0 0 0 6.67 4.5 1 1 1 34.033 34.033 3 2.0906E-05 9426 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.87 74.129 325.98 224.37 289.34 269.97 474.8 433.11 306 223 287 269 480 419 2 2 2 2 3 3 45332 4037 2800 3889 9450;9451;9452 10891;10892;10893 10891 3 EAITALYFMESFAR Unmodified 1647.7967 0.79667909 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 9 0 1 95.965 95.965 2 0.039396 34350 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.765 19.106 0 19.152 0 9.837 0 0 0 18 0 9 0 0 0 1 0 1 0 0 1099.1 4038 2041 3890 9453 10894 10894 1 EAIVTSEELGQDLEHVEVLQK Unmodified 2365.2013 0.20128517 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 79.05 79.05 4 1.9569E-11 29495 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.02 83.9 119.11 91.796 170.4 169.59 148.18 47.47 112 93 167 167 149 46 3 3 3 5 3 1 27461 4039 551 3891 9454;9455;9456;9457 10895;10896;10897;10898;10899;10900 10896 6 EAKPDELMDSK Unmodified 1261.586 0.58601761 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 1 4 0 1 50.847 50.847 3 0.06129 16735 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.616 13.788 79.182 43.605 0 80.882 0 0 74 46 0 74 0 0 1 1 0 1 0 0 4772.8 4040 3343 3892 9458 10901 10901 1 EALDLGITGPEGIEISHPEELEAEATHR Unmodified 3012.4676 0.46762362 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 3.33 0.471 2 1 71.628 71.628 4;5 5.1081E-18 26010 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.341 61.145 29.847 18.218 17.686 48.707 46.502 0 28 18 19 46 47 0 2 1 1 2 2 0 34794 4041 3172 3893 9459;9460;9461 10902;10903;10904 10904 3 EALDSDGWLHTGDIGK Unmodified 1712.8006 0.8005785 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;F6WYN6 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 5 0 1 65.623 65.623 3 0.00024879 23304 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.136 40.305 49.358 0 0 30.604 0 78.884 46 0 0 28 0 74 1 0 0 1 0 1 2849.2 4042 2753 3894 9462 10905 10905 1 EALEAVEVLVK Unmodified 1198.6809 0.68090428 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 6 0 1 81.069 81.069 3 0.018713 29954 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.894 22.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4043 178 3895 9463 10906 10906 1 EALELLK Unmodified 814.48002 0.48001963 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 7.43 2.44 1 2 2 1 1 66.849 66.849 2;3 0.0053585 22422 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.262 21.029 958.07 818.34 948.7 840.05 753.27 895.27 902 836 961 827 771 860 7 5 6 5 4 6 644490 4044 1398 3896 9464;9465;9466;9467;9468;9469;9470 10907;10908;10909;10910;10911;10912;10913 10910 7 EALELTDTGLLSGSEER Unmodified 1818.8847 0.88470206 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 3.5 0.5 1 1 71.514 71.514 3 6.5841E-13 26586 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.28 103.72 28 19 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 12465 4045 3204 3897 9471;9472 10914;10915 10914 2 EALELWSALQLK Unmodified 1399.7711 0.77111627 2595 Q8K274 Fn3krp Ketosamine-3-kinase yes yes 0 0 0 0 9 0 1 90.992 90.992 3 2.203E-08 32240 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.66 61.921 0 29.792 0 20.767 0 29.848 0 28 0 19 0 28 0 1 0 1 0 1 3020.5 4046 2595 3898 9473 10916 10916 1 EALENANTNTEVLK Unmodified 1544.7682 0.76821573 3091 Q9D8B3 Chmp4b Charged multivesicular body protein 4b yes yes 0 0 0 0 4 0 1 54.987 54.987 3 9.7571E-05 18651 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.063 63.257 109.45 0 0 0 0 88.478 102 0 0 0 0 83 1 0 0 0 0 1 9750.3 4047 3091 3899 9474 10917 10917 1 EALENEFK Unmodified 978.46583 0.46582612 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 0 4.33 0.471 2 1 55.78 55.78 2;3 0.0039774 19040 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.516 40.223 104.69 64.933 56.451 0 0 69.29 102 65 56 0 0 65 2 1 1 0 0 1 9724.9 4048 1176 3900 9475;9476;9477 10918;10919;10920 10919 3 EALKDEYDDLSDLTPAQQETLSDWDSQFTFK Unmodified 3634.6475 0.64749806 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 1 13 0 1 88.544 88.544 4 2.11E-08 35004 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.615 43.9 20.292 18.848 0 0 0 29.848 19 19 0 0 0 28 1 1 0 0 0 1 3168.7 4049 1228 3901 9478 10921 10921 1 EALLSSAVDHGSDEAR Unmodified 1655.7751 0.77509203 1823 P80314;A0A1W2P7B7 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 4 0 1 49.641 49.641 3 4.2969E-05 15972 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.388 71.848 29.904 27.776 0 0 46.477 47.71 28 28 0 0 46 46 1 1 0 0 1 1 23558 4050 1823 3902 9479 10922 10922 1 EALPTWDK Unmodified 958.476 0.47599688 1270 O88544 Cops4 COP9 signalosome complex subunit 4 yes yes 0 0 0 0 8.67 3.09 1 1 1 59.007 59.007 2;3 0.017301 20681 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.239 16.753 0 86.139 129.99 123.41 0 0 0 83 130 120 0 0 0 1 1 1 0 0 7865.7 4051 1270 3903 9480;9481;9482 10923;10924;10925 10925 3 EALQDVEDENQ Unmodified 1288.5419 0.54190419 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 0 13 0 1 53.074 53.074 2 4.4551E-09 17774 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.57 116.25 78.806 0 100.23 0 86.818 0 74 0 93 0 83 0 1 0 1 0 1 0 32944 4052 1715 3904 9483 10926 10926 1 EALQLMATYLPK Unmodified 1376.7374 0.7373733 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 10 0.816 1 1 1 84.547 84.547 3 0.00068899 26524 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.924 36.138 20.387 28 0 30.256 18.484 19 19 28 0 28 19 19 1 1 0 1 1 1 10736 4053 1943 3905 9484;9485;9486 10927;10928;10929 10929 3 EALQNDWLPFELR Unmodified 1629.8151 0.81510635 2888 Q99PL6 Ubxn6 UBX domain-containing protein 6 yes yes 0 0 0 0 6 0 1 84.741 84.741 2 0.0089366 31550 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.951 36.081 20.145 0 40.7 7.0494 19.24 9.045 19 0 38 9 19 9 1 0 1 1 1 1 1587.8 4054 2888 3906 9487 10930 10930 1 EALSIIGDINTTTVSTPMPPPVDDSWLQVQSVPAGR Unmodified 3790.9088 0.90875532 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;P39053;F6RRH9;F6TH70 Dnm1 Dynamin-1 no no 0 0 0 0 7.75 3.11 1 1 1 1 96.415 96.415 4 3.9063E-31 36392 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.554 75.273 6.4189 3.192 11.171 39.967 0 12.792 6 3 12 37 0 12 1 1 2 1 0 2 13352 4055 118;1534;988 3907 9488;9489;9490;9491 10931;10932;10933;10934 10932 4 EALSSWLQDGVDGFQFR Unmodified 1953.9221 0.92209062 1348 P10852;A0A0U1RPK4;A0A0U1RPQ7 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 7.5 0.5 1 1 90.547 90.547 3 4.9522E-06 33529 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.569 78.725 9 0 0 0 19 0 9 0 0 0 19 0 1 0 0 0 1 0 9387.1 4056 1348 3908 9492;9493 10935;10936 10935 2 EALTYDGALLGDR Unmodified 1392.6885 0.68850885 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 4.67 0.471 1 2 64.717 64.717 2;3 5.6101E-15 22845 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.53 90.529 127.81 55.051 232.58 82.627 188.41 57.589 120 56 222 83 186 56 2 1 3 2 3 1 31083 4057 3333 3909 9494;9495;9496 10937;10938;10939;10940 10939 4 EALVEPASESPRPALAR Unmodified 1791.9479 0.94791144 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 1 4 0 1 48.588 48.588 3 5.8294E-06 15610 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.53 72.716 49.358 0 0 0 0 39.442 46 0 0 0 0 37 1 0 0 0 0 1 6081.8 4058 1815 3910 9497 10941 10941 1 EALVSVWLQCTAISR Unmodified 1731.8978 0.89779012 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 11 0 1 84.602 84.602 2 0.0030387 26481 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.344 44.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3050.2 4059 1868 3911 9498 10942 10942 1 EAMEDGEIDGNK Unmodified 1306.5347 0.53471033 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 2 0 1 47.795 47.795 2 8.6006E-53 15134 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 171.92 156.78 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4060 1333 3912 9499 10943 10943 1 EAMEHPYFYTVVK Unmodified 1612.7596 0.7595653 2083 Q60737 Csnk2a1 Casein kinase II subunit alpha yes yes 0 0 0 0 6 0 1 61.92 61.92 3 0.0060751 21004 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.298 31.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4061 2083 3913 9500 10944 10944 1 EANELQQWITEK Unmodified 1487.7256 0.72562264 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 73.196 73.196 2;3 1.6444E-14 27385 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 137.4 91.424 276.7 250 111.62 294.77 129.2 134.91 259 251 111 278 131 129 3 3 2 4 2 2 80822 4062 551 3914 9501;9502;9503 10945;10946;10947;10948 10948 4 EANHDGDFGITLTELR Unmodified 1786.8486 0.84859132 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 3 0 2 65.331 65.331 3 3.3935E-06 22709 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.013 63.378 40.061 65.38 64.501 38.255 53.466 97.612 38 65 65 37 56 93 2 2 2 1 2 2 10628 4063 1096 3915 9504;9505 10949;10950 10949 2 EANHDGDFGITLTELR Deamidation (N) 1787.8326 0.83260691 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 1 0 0 4 0 1 65.561 65.561 3 5.0063E-11 23372 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.26 98.894 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 7213.1 4064 1096 3915 9506 10951 10951 286 1 EANHNVSAPYGR Unmodified 1313.6113 0.61126158 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 4.5 0.5 1 1 29.561 29.561 3 0.00038123 6663 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.997 35.989 0 0 68.694 36.727 37.888 29.848 0 0 65 38 37 28 0 0 2 2 1 1 9514.8 4065 2282;2057 3916 9507;9508 10952;10953 10952 2 EANLAAAFGK Unmodified 990.51345 0.51344502 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 8.8 2.23 2 1 1 1 64.192 64.192 2;3 0.00010167 21236 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.22 70.144 247.06 227.07 122.74 159.4 324.4 239.65 232 231 120 149 325 232 4 4 2 3 5 4 32429 4066 1164 3917 9509;9510;9511;9512;9513 10954;10955;10956;10957;10958;10959 10955 6 EANLAAAFGKPINF Unmodified 1461.7616 0.76161421 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 1 9.8 1.72 1 2 1 1 80.36 80.36 2;3 2.2754E-07 27533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.03 91.234 166.84 136.88 197.01 40.441 76.416 77.808 157 139 186 37 74 74 3 2 3 1 2 2 131710 4067 1164 3918 9514;9515;9516;9517;9518 10960;10961;10962;10963;10964 10961 5 EANLLNAVIVQR Unmodified 1338.7619 0.76194857 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 9.33 2.62 1 1 1 69.552 69.552 2;3 0.0011152 23726 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.157 31.259 20.149 29.792 39.932 50.278 0 108.73 19 28 37 46 0 102 1 1 1 1 0 2 11533 4068 3000 3919 9519;9520;9521 10965;10966;10967 10965 3 EANLQALIATGGDINAAIER Unmodified 2039.0647 0.064732107 3295;2657;2883 Q8R317;A0A286YE09;Q99NB8;Q9QZM0 Ubqln1;Ubqln4;Ubqln2 Ubiquilin-1;Ubiquilin-4;Ubiquilin-2 no no 0 0 0 0 4 3 1 1 82.677 82.677 3 1.7547E-05 29078 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.117 38.526 20.292 18.848 0 20.246 27.69 28.464 19 19 0 19 28 28 1 1 0 1 1 2 4132.4 4069 2657;2883;3295 3920 9522;9523 10968;10969 10968 2 EANMEGIVTIMGLKPETR Unmodified 1988.0071 0.0070825729 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 8 0.707 1 2 1 76.388 76.388 3;4 3.1928E-07 26961 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.016 62.478 108.91 93.772 136.94 137.13 45.344 198.28 102 93 130 130 46 186 2 3 2 3 1 3 27254 4070 71;74;949;1367 3921 9524;9525;9526;9527 10970;10971;10972;10973 10970 4 EANQAINPK Unmodified 983.50361 0.50360861 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 5 0 1 39.102 39.102 2 0.0058165 10706 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.287 29.117 20.149 0 39.932 0 0 39.442 19 0 37 0 0 37 1 0 1 0 0 1 3200.7 4071 2135 3922 9528 10974 10974 1 EANQQQQFNR Unmodified 1261.58 0.57996145 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.67 4.57 1 1 1 1 2 29.475 29.475 2;3 6.2619E-10 7129 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 160.82 119.7 117.46 281.61 374.63 159.8 253.61 250.07 111 278 366 162 255 241 2 5 4 3 4 4 88864 4072 551 3923 9529;9530;9531;9532;9533;9534 10975;10976;10977;10978;10979;10980 10976 6 EANVDAATK Unmodified 917.44543 0.44542503 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;W4VSQ0;Q3UVY0;S4R229 Ank3 Ankyrin-3 yes no 0 0 0 0 4.5 0.5 1 1 38.31 38.31 2 0.0045777 10841 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.344 36.218 0 19.751 27.822 58.879 35.678 97.054 0 19 28 56 37 92 0 1 1 2 1 2 5253.4 4073 3450 3924 9535;9536 10981;10982 10981 2 EAPAPLDVAGGEDDPR Unmodified 1607.7427 0.74272927 2005 Q3USB7 Plcl1 Inactive phospholipase C-like protein 1 yes yes 0 0 0 0 2 1 1 1 53.953 53.953 3 7.5174E-05 16652 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.944 55.198 29.865 14.657 44.414 0 38.044 44.752 28 14 42 0 37 43 1 1 2 0 1 2 6802.2 4074 2005 3925 9537;9538 10983;10984 10983 2 EAPDEYEDVGFIGEVR Unmodified 1823.8214 0.82137352 3257 Q9QUN9 Dkk3 Dickkopf-related protein 3 yes yes 0 0 0 0 2 0 1 69.395 69.395 3 0.00023492 25159 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.52 51.728 20.33 0 9.6355 0 0 0 19 0 9 0 0 0 1 0 1 0 0 0 2466.1 4075 3257 3926 9539 10985 10985 1 EAPDGCPDHVLR Unmodified 1364.6143 0.61429805 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 2 0.816 1 1 1 38.031 38.031 3 5.6076E-28 10957 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 178.65 143.11 247.74 140.73 142.81 223.77 182.76 153.62 232 139 139 213 185 149 3 2 2 2 3 3 163580 4076 3355 3927 9540;9541;9542 10986;10987;10988;10989 10987 4 EAPDTAEREETQQQVQDLETR Unmodified 2472.1365 0.13645308 2830 Q99JP6 Homer3 Homer protein homolog 3 yes yes 0 0 0 1 1.5 0.5 1 1 47.966 47.966 3 1.1041E-70 14255 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 178.03 158.36 32.013 35.081 0 0 24.49 48.337 30 35 0 0 25 46 1 1 0 0 1 1 19230 4077 2830 3928 9543;9544 10990;10991 10990 2 EAPEGQGQGPQAAR Unmodified 1394.6539 0.65385468 1998 Q3UMT1 Ppp1r12c Protein phosphatase 1 regulatory subunit 12C yes yes 0 0 0 0 1.5 0.5 1 1 29.307 29.307 3 6.9269E-05 6761 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.264 72.687 0 39.799 37.852 19.665 0 0 0 38 38 19 0 0 0 2 2 1 0 0 3194.9 4078 1998 3929 9545;9546 10992;10993 10993 2 EAPGAAEGR Unmodified 856.40389 0.40389457 2876 Q99MR3 Slc12a9 Solute carrier family 12 member 9 yes yes 0 0 0 0 2 0 1 25.72 25.72 2 0.0137 5222 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.692 41.916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4079 2876 3930 9547 10994 10994 1 EAPGTTSPLR Unmodified 1027.5298 0.52982336 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 38.517 38.517 2 0.0035169 10518 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.573 47.496 39.516 36.703 0 88.477 119.21 95.736 37 37 0 83 121 93 1 1 0 2 2 2 15107 4080 3391 3931 9548;9549;9550 10995;10996;10997 10996 3 EAPPASTVSGIRPAR Unmodified 1507.8107 0.81068967 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 8 3.56 1 1 1 39.687 39.687 3 6.9325E-11 11049 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.17 78.453 78.189 170.6 108.84 142.4 161.47 163.82 74 167 111 139 166 158 2 3 2 3 3 3 28500 4081 2028 3932 9551;9552;9553 10998;10999;11000 10998 3 EAQAGLAEAQEDLEAER Unmodified 1828.8439 0.84389987 1149 Q6URW6;K3W4R2;A0A140LI60 Myh14 Myosin-14 yes no 0 0 0 0 1 0 1 59.334 59.334 3 5.0572E-06 19248 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.384 77.719 0 29.337 27.245 28.98 0 39.442 0 28 28 28 0 37 0 1 1 1 0 1 10184 4082 1149 3933 9554 11001 11001 1 EAQALADGR Unmodified 929.45666 0.45665842 1116 H3BJ67;H3BL92;H3BKQ3 Evi5l yes no 0 0 0 0 2 0 1 34.99 34.99 2 0.054219 9458 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.064 25.591 20.292 18.848 0 9.837 0 0 19 19 0 9 0 0 1 1 0 1 0 0 1321.6 4083 1116 3934 9555 11002 11002 1 EAQAPTGGDPAGLLPPEWEEDEER Unmodified 2592.1616 0.1616052 2648 Q8R1T1 Chmp7 Charged multivesicular body protein 7 yes yes 0 0 0 0 2.5 0.5 1 1 72.534 72.534 3 0.00012556 26293 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.862 37.262 0 0 0 0 0 18 0 0 0 0 0 18 0 0 0 0 0 2 3717.2 4084 2648 3935 9556;9557 11003;11004 11003 2 EAQDDLVK Unmodified 916.45018 0.45017606 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 4 0 1 45.761 45.761 3 0.0075956 14173 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.224 37.15 0 0 0 49.434 44.864 28.568 0 0 0 46 46 28 0 0 0 1 1 1 2511.6 4085 1451 3936 9558 11005 11005 1 EAQDSSSYR Unmodified 1041.4363 0.43631691 2140 Q61792;A2A6G9;A2A6H0 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 4 4.56 2 1 1 1 26.132 26.132 2 7.6281E-06 4912 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 153.97 117.57 206.61 182.63 203.24 258.03 227.78 252.99 194 181 203 250 227 241 4 5 3 4 5 3 137090 4086 2140 3937 9559;9560;9561;9562;9563 11006;11007;11008;11009;11010;11011;11012 11006 7 EAQLALGNAAADATEAK Unmodified 1642.8162 0.81622856 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 5 0 1 60.991 60.991 3 0.0001773 21186 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.49 36.617 0 48.188 45.199 37.747 0 0 0 46 46 37 0 0 0 1 1 1 0 0 2821.7 4087 1035 3938 9564 11013 11013 1 EAQLDEEGQFLVR Unmodified 1532.7471 0.74708636 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 3.5 0.5 1 1 62.71 62.71 2 0.00020519 22492 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.734 67.479 20.387 29.152 38.285 0 0 20.254 19 28 37 0 0 19 1 1 1 0 0 1 3971.2 4088 1221 3939 9565;9566 11014;11015 11014 2 EAQMAAK Unmodified 747.35852 0.35852428 1619 P54227;D3Z5N2 Stmn1 Stathmin yes no 0 0 0 0 5 0 1 36.889 36.889 2 0.02936 9630 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.794 15.498 108.27 69.119 138.53 161.13 175.63 152.76 102 74 139 158 180 148 1 1 1 1 1 1 9676.8 4089 1619 3940 9567 11016 11016 1 EAQNDLEQVLR Unmodified 1313.6575 0.65754307 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 4 0 1 58.255 58.255 3 0.0097686 20183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.207 23.109 20.292 18.848 0 0 28.62 19.437 19 19 0 0 28 19 1 1 0 0 1 1 1647.4 4090 2424 3941 9568 11017 11017 1 EAQSICER Unmodified 991.43929 0.4392938 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 6 4.97 1 1 1 30.499 30.499 2 0.00066328 7322 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 150.36 69.171 780.28 305.95 787.78 639.31 768.7 457.72 733 316 775 633 778 440 3 2 3 2 3 1 175330 4091 1203;3123 3942 9569;9570;9571 11018;11019;11020 11018 3 EAQTSFLHLGYLPNQLFR Unmodified 2133.1007 0.10072368 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 10 0 1 79.291 79.291 3 0.010045 24704 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.996 16.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4092 2744 3943 9572 11021 11021 1 EAREEAEEK Unmodified 1089.4938 0.49383179 1508 P34022;H7BX22 Ranbp1 Ran-specific GTPase-activating protein yes no 0 0 0 1 1 0 1 28.394 28.394 3 0.0016038 6049 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.309 49.446 261.94 187.69 0 0 337.25 200.38 245 193 0 0 329 197 1 1 0 0 1 1 18947 4093 1508 3944 9573 11022 11022 1 EASAAENPPVR Unmodified 1139.5571 0.55710075 1413 P19137 Lama1 Laminin subunit alpha-1 yes yes 0 0 0 0 2 0 1 34.003 34.003 2 0.005774 8970 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.224 33.004 20.207 0 30.194 0 9.414 0 19 0 28 0 9 0 1 0 1 0 1 0 817.86 4094 1413 3945 9574 11023 11023 1 EASAALQVR Unmodified 943.50869 0.50869399 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 5.5 0.5 1 1 40.887 40.887 2 0.0059444 11567 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.269 22.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4095 2226 3946 9575;9576 11024;11025 11024 2 EASDIILTDDNFSSIVK Unmodified 1865.9258 0.92583859 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 5 0.707 1 2 1 80.179 80.179 3;4 1.6854E-06 30210 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.157 61.579 118.99 90.606 130.99 134.99 18.867 78.346 112 93 130 129 19 74 3 3 3 3 1 2 23834 4096 1042 3947 9577;9578;9579;9580 11026;11027;11028;11029 11027 4 EASDIILTDDNFTSIVK Unmodified 1879.9415 0.94148865 1096;487;928 G5E829;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase no no 0 0 0 0 7.43 3.58 1 2 2 2 81.339 81.339 2;3;4 3.4037E-19 30800 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.9 99.949 277.68 182.71 109.37 397.55 315.05 124.81 260 186 112 371 315 120 6 5 4 7 6 2 94417 4097 1096;487;928 3948 9581;9582;9583;9584;9585;9586;9587 11030;11031;11032;11033;11034;11035;11036;11037;11038;11039;11040 11033 11 EASDPQPEDVDGGLK Unmodified 1555.7002 0.70019575 1563 P47753;Q5RKN9 Capza1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 0 2 0.816 1 1 1 51.401 51.401 3 1.1086E-05 17304 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.508 57.274 128 101.81 92.65 83.398 152.22 107.12 120 102 92 83 149 102 2 2 2 2 2 2 22904 4098 1563 3949 9588;9589;9590 11041;11042;11043 11043 3 EASEEDLLVVHTR Unmodified 1496.7471 0.74708636 2751 Q91WA3;D3Z2G7;F6UL83 Hdac11 Histone deacetylase 11 yes no 0 0 0 0 3 0 1 51.336 51.336 3 0.00049066 17262 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.989 52.731 29.872 0 28.859 28.884 0 0 28 0 28 28 0 0 1 0 1 1 0 0 3535.8 4099 2751 3950 9591 11044 11044 1 EASGSACDLPR Unmodified 1161.5084 0.508436 2240 Q6PDY2 Ado 2-aminoethanethiol dioxygenase yes yes 0 0 0 0 2.5 0.5 1 1 36.688 36.688 2;3 0.00075631 10519 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.672 52.46 0 19.58 76.809 46.793 0 39.442 0 19 74 47 0 37 0 1 2 2 0 1 4558.9 4100 2240 3951 9592;9593 11045;11046 11046 2 EASIYTGITLSEYFR Unmodified 1748.8621 0.86211612 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 9 1.41 2 1 82.376 82.376 3 0.00087253 29125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.475 27.742 0 19.403 48.608 0 0 39.442 0 19 46 0 0 37 0 1 1 0 0 1 3436.6 4101 1596 3952 9594;9595;9596 11047;11048;11049 11047 3 EASLGEASK Unmodified 890.43453 0.434526 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 41.364 41.364 2 0.00066206 12198 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.75 46.13 176.43 176.91 323.55 205.04 161.95 350.36 166 185 314 203 166 333 2 3 3 2 2 3 74868 4102 2148 3953 9597;9598;9599;9600 11050;11051;11052;11053 11051 4 EASPNPEEGIIR Unmodified 1310.6466 0.64664404 627 B2RXS4 Plxnb2 Plexin-B2 yes yes 0 0 0 0 2.5 0.5 1 1 47.864 47.864 2 4.2021E-09 15190 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 101.35 62.567 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 2257.8 4103 627 3954 9601;9602 11054;11055 11054 2 EASPPTSADK Unmodified 1001.4666 0.46655441 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 5.6 3.77 2 1 1 1 36.509 36.509 2;3 1.044E-05 10413 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.12 66.313 147.91 189.24 187.68 163.9 173.02 173.08 139 186 186 158 177 167 3 4 4 4 4 5 40955 4104 1424 3955 9603;9604;9605;9606;9607 11056;11057;11058;11059;11060;11061 11056 6 EASSLPQLVEMIADHQIETGLLKPDLK Unmodified 2974.5685 0.56852364 935 E9Q8N8;O88343;A7E1Z5;D3Z7G8 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 1 8 0 1 93.557 93.557 5 0.0025934 33930 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.32 16.918 20.346 8.2041 0 0 23.569 14.251 19 9 0 0 23 14 1 1 0 0 1 1 1306.6 4105 935 3956 9608 11062 11062 1 EASVGPAQPQLPAVLQESR Unmodified 1976.0327 0.032703697 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 4.5 0.5 1 1 65.587 65.587 3 1.3178E-08 23380 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.325 58.689 0 0 0 20.272 26.332 58.945 0 0 0 19 28 56 0 0 0 1 1 1 8184 4106 628 3957 9609;9610 11063;11064 11063 2 EASYQLQDTTGYTAR Unmodified 1702.7798 0.77984305 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 4 0 1 49.884 49.884 3 3.4509E-05 16254 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.59 60.057 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 3204.6 4107 553 3958 9611 11065 11065 1 EATADDLIK Unmodified 974.49204 0.49204087 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 3 0 1 53.9 53.9 2 0.0010463 18454 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.68 44.483 29.531 36.452 55.298 66.4 71.715 76.838 28 37 56 65 74 74 1 1 1 1 1 1 4268.4 4108 1955 3959 9612 11066 11066 1 EATDAIGHLDR Unmodified 1196.5786 0.57856447 306 Q45VK5;A0A1L1STE4;Q9Z1X4 Ilf3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 3 0 1 42.374 42.374 3 0.00047255 13144 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.245 54.233 78.998 0 116.02 82.695 117.08 135.24 74 0 111 84 120 130 2 0 3 3 3 3 6391 4109 306 3960 9613 11067;11068;11069 11068 3 EATDEELEK Unmodified 1062.4717 0.47169936 419 A2A432;E9PXY1 Cul4b Cullin-4B yes no 0 0 0 0 1 0 1 44.527 44.527 2 0.010773 12898 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.424 39.621 39.345 26.513 37.443 18 28.461 0 37 28 37 19 28 0 1 1 1 1 1 0 2747.5 4110 419 3961 9614 11070 11070 1 EATDPRPYEAENAIESWR Unmodified 2132.9763 0.97631103 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 1 5.5 4.39 1 1 1 1 59.341 59.341 3 2.8012E-05 20730 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.422 54.001 247.34 210.49 89.37 204.67 108.58 273 232 213 93 194 112 259 5 4 2 4 2 4 89391 4111 1564 3962 9615;9616;9617;9618 11071;11072;11073;11074;11075 11074 5 EATDTPIVIQPASATETTQLTADSHPSYHTDGFN Unmodified 3614.6649 0.66487946 1682 P60904 Dnajc5 DnaJ homolog subfamily C member 5 yes yes 0 0 0 0 3 0.707 1 2 1 67.031 67.031 4 5.9453E-05 23941 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.753 32.348 0 20.216 19.476 0 38.702 29.848 0 19 18 0 37 28 0 1 2 0 1 2 24298 4112 1682 3963 9619;9620;9621;9622 11076;11077;11078;11079 11079 4 EATEGAVR Unmodified 831.40865 0.4086456 358 E9PWG2;A0A286YCX6 Trappc8 yes no 0 0 0 0 2 0 1 26.671 26.671 2 0.021629 5573 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.282 16.523 24.504 18.331 13.925 0 0 24.518 23 19 14 0 0 23 1 1 1 0 0 1 3913.8 4113 358 3964 9623 11080 11080 1 EATESFASDPILYR Unmodified 1597.7624 0.76240208 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 0 6.67 4.5 1 1 1 64.552 64.552 2;3 6.2858E-35 22869 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 174.23 145.5 50.251 0 30.194 0 61.763 29.041 47 0 28 0 60 28 2 0 1 0 2 1 15787 4114 1609 3965 9624;9625;9626 11081;11082;11083 11082 3 EATESFASDPILYRPVAVALDTK Unmodified 2492.2799 0.27986984 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 1 7.88 3.1 2 2 1 1 2 78.558 78.558 3;4;5 6.3388E-98 29590 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 192.1 171.29 807.47 940.14 1167.8 1085.8 1200.4 1430.4 761 948 1178 1079 1239 1374 8 9 12 12 11 11 472310 4115 1609 3966 9627;9628;9629;9630;9631;9632;9633;9634 11084;11085;11086;11087;11088;11089;11090;11091;11092;11093;11094;11095;11096 11086 13 EATNPPIIQEEKPK Unmodified 1592.841 0.84098675 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 1 7 3.54 1 1 1 1 49.832 49.832 3 1.9639E-16 16433 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.96 99.471 292.74 175.96 96.554 245.34 73.565 178.02 278 176 93 231 74 167 4 2 1 3 1 2 29326 4116 1470 3967 9635;9636;9637;9638 11097;11098;11099;11100 11097 4 EATWESVSMMLQLGGTVIGSAR Unmodified 2322.1348 0.13480228 1568 P47857;A0A2R8VHV2;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 9.5 0.5 1 1 102.26 102.26 3 8.725E-06 33071 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.48 46.38 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 1091.2 4117 1568 3968 9639;9640 11101;11102 11102 2 EATWVVDVK Unmodified 1045.5444 0.5444108 1501 P32020 Scp2 Non-specific lipid-transfer protein yes yes 0 0 0 0 7 0 1 65.139 65.139 2 0.010973 21637 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.173 33.291 29.426 56.667 55.829 27.277 0 0 28 56 56 28 0 0 1 1 1 1 0 0 2371.7 4118 1501 3969 9641 11103 11103 1 EAVAEHTK Unmodified 883.43995 0.43994572 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 4 0 1 30.039 30.039 3 0.030867 6875 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.418 24.495 49.128 45.631 0 50.278 0 0 46 46 0 46 0 0 1 1 0 1 0 0 4539.6 4119 2490 3970 9642 11104 11104 1 EAVAHENNR Unmodified 1038.4843 0.48427016 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 4.6 4.32 1 1 1 1 1 18.437 18.437 3 5.5348E-09 2782 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 166.07 66.629 192.58 152.83 172.81 113.32 142.28 65.127 181 157 170 111 141 62 6 6 5 4 5 4 138600 4120 775 3971 9643;9644;9645;9646;9647 11105;11106;11107;11108;11109;11110;11111;11112;11113 11108 9 EAVAHENNR Deamidation (N) 1039.4683 0.46828574 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 1 0 0 9.33 5.19 1 2 20.846 20.846 3 0.013733 3351 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.823 29.982 14.947 4.5274 8.7596 14.78 4.9786 22.244 14 5 9 14 5 21 2 1 1 1 1 2 1479.7 4121 775 3971 9648;9649;9650 11114;11115;11116 11114 205 3 EAVAICK Unmodified 789.40547 0.40547447 1783;1796 P68404;P63318;Q2NKI4 Prkcb;Prkcg Protein kinase C beta type;Protein kinase C gamma type;Protein kinase C no no 0 0 0 0 8.67 3.09 1 1 1 46.716 46.716 2 0.010125 14510 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.78 72.736 995.9 653.78 1043.3 677.53 971.12 1152.4 937 688 1033 673 996 1107 4 3 4 2 4 4 76223 4122 1796;1783 3972 9651;9652;9653 11117;11118;11119;11120 11120 4 EAVAMESFAK Unmodified 1081.5114 0.51139611 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 7.25 3.34 2 1 1 59.478 59.478 2;3 1.1957E-05 20508 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.898 61.681 148.54 88.49 26.699 50.166 130.07 105.02 139 93 28 47 130 102 2 2 1 1 2 2 6654 4123 1823 3973 9654;9655;9656;9657 11121;11122;11123;11124 11124 4 EAVAPEPR Unmodified 867.44503 0.4450311 749 S4R217;D3Z118;P97411 Ica1 Islet cell autoantigen 1 yes no 0 0 0 0 3 0 1 33.384 33.384 2 0.03833 8956 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.383 33.49 69.205 54.166 44.929 27.926 0 69.29 65 56 46 28 0 65 1 1 1 1 0 1 4348.9 4124 749 3974 9658 11125 11125 1 EAVCIVLSDDTCSDEK Unmodified 1839.7866 0.78664427 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 3.5 0.5 1 1 65.718 65.718 3 6.3795E-06 23855 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.191 58.827 29.904 47.992 0 39.385 56.126 18.652 28 47 0 37 56 19 1 2 0 1 1 1 10536 4125 1875 3975 9659;9660 11126;11127 11126 2 EAVELPLTHFELYK Unmodified 1687.8821 0.88212328 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 7 0 1 76.292 76.292 3 3.6052E-06 26825 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.32 82.647 128.88 43.675 122.42 93.186 62.016 97.368 121 46 120 93 65 93 2 1 2 2 1 1 5108.5 4126 237 3976 9661 11128;11129 11129 2 EAVESQR Unmodified 817.393 0.39299553 2233 Q6PAM1 Txlna Alpha-taxilin yes yes 0 0 0 0 1 0 1 23.684 23.684 2 0.03171 4003 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.916 19.112 29.636 31.348 41.967 32.475 0 44.772 28 32 42 32 0 42 1 1 1 1 0 1 3557.8 4127 2233 3977 9662 11130 11130 1 EAVGDDESVPENVLNFDDLTADALAALK Unmodified 2930.4033 0.40329203 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 9 4.06 1 1 2 106.8 106.8 3;4 4.7323E-18 35111 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.805 59.933 25.53 5.96 34.088 3.9886 17.46 11.496 24 6 32 4 17 11 2 2 2 1 2 2 3984.9 4128 1460 3978 9663;9664;9665;9666 11131;11132;11133;11134 11131 4 EAVGDLLDAFK Unmodified 1176.6027 0.60265396 119 A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6;A0A0J9YVC1;A0A0J9YUC1;E9Q770 Eif4g1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 0 7.5 0.5 1 1 84.117 84.117 3 0.00044932 30623 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.017 57.166 0 40.122 18.536 49.173 0 0 0 38 19 46 0 0 0 2 1 2 0 0 3073.3 4129 119 3979 9667;9668 11135;11136 11135 2 EAVGGITIK Unmodified 886.51238 0.51238239 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 6.5 0.5 1 1 56.259 56.259 2 0.0057072 17427 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.645 42.578 117.9 81.966 132.65 56.124 127.78 163.72 111 83 130 56 130 157 2 1 2 1 2 2 5304 4130 2012 3980 9669;9670 11137;11138 11138 2 EAVGIYISTLK Unmodified 1192.6703 0.67033959 2420 Q8BK64;A0A1Y7VM19 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes no 0 0 0 0 9 1 1 1 71.935 71.935 2 2.4846E-06 24202 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.258 63.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4131 2420 3981 9671;9672 11139;11140 11139 2 EAVGNSTR Unmodified 832.40389 0.40389457 1654 P58389;A2AWE9 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 6.67 4.5 1 1 1 22.709 22.709 2 0.017484 4075 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.906 24.402 148.33 103.01 50.313 135.37 197.95 132.93 139 107 56 130 199 130 2 2 1 3 2 3 23817 4132 1654 3982 9673;9674;9675 11141;11142;11143 11141 3 EAVNDCDIR Unmodified 1090.4713 0.47132221 685 Q9R1V6;D3YUP9 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 1.5 0.5 1 1 36.638 36.638 2 1.5138E-05 9704 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 149.82 81.395 157.1 124.71 180.32 162.79 187.64 105.49 148 130 181 162 190 102 2 2 2 2 2 1 40069 4133 685 3983 9676;9677 11144;11145 11144 2 EAVQLLEDYK Unmodified 1206.6132 0.61321864 2450 Q925N0;Q8BRQ9;D3YXH5 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 5 0 1 71.477 71.477 3 0.0035208 26146 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.255 38.496 88.74 63.176 0 59.676 81.447 76.56 83 65 0 56 83 74 1 1 0 1 1 1 9280.5 4134 2450 3984 9678 11146 11146 1 EAVQLMAEAEK Unmodified 1217.5962 0.59618837 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 5 0 1 62.586 62.586 3 2.6141E-09 21947 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.31 79.742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4135 1478 3985 9679 11147 11147 1 EAVSICK Unmodified 805.40039 0.4003891 2030;1425 P20444;Q4VA93;Q3TQ39 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 7 0 1 46.569 46.569 2 0.036462 12909 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.119 36.672 88.842 42.953 0 71.045 0 78.884 83 46 0 65 0 74 1 1 0 1 0 1 3579.6 4136 1425;2030 3986 9680 11148 11148 1 EAVSILK Unmodified 758.4538 0.45380487 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 6.5 0.5 1 1 56.209 56.209 2 0.028158 17387 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.754 21.072 246.49 129.25 121.12 102.6 152.91 222.69 231 139 120 102 158 213 2 2 1 1 2 2 20755 4137 1388 3987 9681;9682 11149;11150 11150 2 EAVSNFLTALSLQR Unmodified 1547.8308 0.83075641 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 8 4.97 1 1 1 85.343 85.343 3 2.2794E-05 23940 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.52 66.863 0 19 19 28 0 0 0 19 19 28 0 0 0 1 1 2 0 0 31762 4138 721 3988 9683;9684;9685 11151;11152;11153;11154 11154 4 EAVSQVR Unmodified 787.41882 0.41881635 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 4 0 1 29.798 29.798 2 0.031399 6823 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.229 17.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4139 179 3989 9686 11155 11155 1 EAVSSGEGGSVSVR Unmodified 1319.6317 0.63172225 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 3 0.816 1 1 1 37.497 37.497 2 1.9163E-10 10849 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.25 79.529 0 49.543 27.822 99.668 17.145 38.953 0 47 28 93 19 37 0 2 1 3 1 1 12416 4140 1999 3990 9687;9688;9689 11156;11157;11158 11157 3 EAVSTAVEEPPTTQR Unmodified 1613.7897 0.78967946 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 3 0 1 44.619 44.619 3 3.3512E-05 14162 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.483 65.541 29.737 27.31 28.508 0 0 29.848 28 28 28 0 0 28 1 1 1 0 0 1 4266.9 4141 3449;3451 3991 9690 11159 11159 1 EAVTEILGIEPDREK Unmodified 1697.8836 0.88357984 2152 Q62348 Tsn Translin yes yes 0 0 0 1 5 0 1 67.862 67.862 3 2.1171E-07 24323 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.65 86.952 78.314 71.409 122.4 62.011 92.47 57.057 74 74 120 65 93 56 1 1 1 1 1 1 5852.4 4142 2152 3992 9691 11160 11160 1 EAVTFLR Unmodified 834.45995 0.45995289 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 54.679 54.679 2 2.0336E-07 16635 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.77 42.031 210.15 0 207.04 186.31 189.2 241.91 197 0 200 185 197 232 1 0 1 1 1 1 30701 4143 3049 3993 9692;9693 11161;11162 11162 2 EAVTTLIASGVSIK Unmodified 1387.7922 0.79224564 1112 Q8BMS7;H3BLI6;H3BL44;H3BIX7;Q3UZR5;Q80XR2 Atp2c1 Calcium-transporting ATPase;Calcium-transporting ATPase type 2C member 1 yes no 0 0 0 0 9 0 1 75.75 75.75 3 0.0069704 25322 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.964 19.555 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4144 1112 3994 9694 11163 11163 1 EAWDAGK Unmodified 775.35007 0.35006808 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9 4 1 1 46.918 46.918 2 0.027191 14683 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.9 41.293 127.08 336.26 122 298.97 396.3 0 120 326 130 287 392 0 1 2 1 2 2 0 24273 4145 2622 3995 9695;9696 11164;11165 11164 2 EAWHGKPLPK Unmodified 1161.6295 0.62947783 1537 P40142 Tkt Transketolase yes yes 0 0 0 1 8.5 0.5 1 1 45.324 45.324 4 0.0025585 11940 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.893 50.625 157.16 273.35 135.91 303.84 209.18 99.138 148 269 143 289 208 93 1 2 1 2 1 1 19337 4146 1537 3996 9697;9698 11166;11167 11166 2 EAYEAGLIGK Unmodified 1049.5393 0.53932542 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 57.977 57.977 2;3 3.6599E-05 19941 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.99 80.944 128.51 94.914 82.437 178.74 26.605 78.125 120 93 84 167 28 74 2 2 2 2 1 1 32665 4147 680 3997 9699;9700;9701;9702 11168;11169;11170;11171 11171 4 EAYPEEAYIADLDAK Unmodified 1696.7832 0.7831971 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 3.33 0.471 2 1 72.736 72.736 2;3 2.4403E-05 27177 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.45 62.903 79.593 82.035 102.52 94.231 119.96 66.434 75 84 102 93 121 65 2 2 2 1 2 1 28704 4148 2020 3998 9703;9704;9705 11172;11173;11174 11173 3 EAYPGDVFYLHSR Unmodified 1552.731 0.73104237 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7 2.77 2 2 1 1 57.917 57.917 3;4 2.3477E-21 19949 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 153.81 126.71 345.56 407.36 353.48 440.78 254.11 695.24 324 408 343 417 269 659 4 6 5 5 4 9 571510 4149 1881 3999 9706;9707;9708;9709;9710;9711 11175;11176;11177;11178;11179;11180;11181;11182;11183 11176 9 EAYVPSK Unmodified 792.40177 0.4017693 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 6 0 1 45.374 45.374 2 0.062375 13154 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.26 39.522 88.074 51.61 121.76 101.83 127.36 114.69 83 56 120 102 130 111 1 1 1 1 1 1 7760 4150 3335 4000 9712 11184 11184 1 ECADMTR Unmodified 881.33714 0.33713691 450 A2AEC2;Q8R0A5 Tceal3 Transcription elongation factor A protein-like 3 no no 0 0 0 0 3 0 1 28.995 28.995 2 0.013497 6904 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.754 58.605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4151 450 4001 9713 11185 11185 1 ECCHGDLLECADDR Unmodified 1748.6553 0.65525294 1321;656 CON__P02769;P07724 Alb Serum albumin no no 0 0 0 0 1.5 0.5 1 1 42.325 42.325 3 3.4143E-22 11912 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.34 130.48 43.254 62.931 70.836 69.009 0 38.376 41 63 72 67 0 36 2 2 2 2 0 2 17896 + 4152 656;1321 4002 9714;9715 11186;11187 11186 2 ECCHGDLLECADDRAELAK Unmodified 2260.9511 0.95110061 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 3.5 0.5 1 1 51.887 51.887 4 5.0043E-05 17617 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.073 47.069 108.33 208.6 69.1 46.16 0 157.77 102 204 74 46 0 148 1 2 1 1 0 2 20509 4153 1321 4003 9716;9717 11188;11189 11188 2 ECCQSNLEPLFEGYIETLR Unmodified 2357.0668 0.066782296 648 CON__O43790;CON__Q14533 yes no 0 0 0 0 4.5 0.5 1 1 87.509 87.509 3 1.0857E-07 33402 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.269 83.105 5.365 0 0 0 9.414 0 5 0 0 0 9 0 1 0 0 0 1 0 1947.5 + 4154 648 4004 9718;9719 11190;11191 11191 2 ECDHSQTDSLEDEEIETFYR Unmodified 2502.0129 0.01289205 1094 Q8R3B1;G5DDB7;Q05DG3 Plcd1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1;Phosphoinositide phospholipase C yes no 0 0 0 0 1 0 1 62.404 62.404 3 2.0712E-10 20766 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.554 74.456 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4155 1094 4005 9720 11192 11192 1 ECDNALR Unmodified 876.37597 0.37596526 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 2 0 1 30.068 30.068 2 0.027344 7097 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.561 62.257 69.193 43.341 56.052 35.713 73.786 57.59 65 46 56 37 74 56 1 1 1 1 1 1 8099.1 4156 287;1450 4006 9721 11193 11193 1 ECDVLPDDTVSTLYNR Unmodified 1895.8571 0.8571071 2633 Q8R0Y6;A0A0N4SW56;A0A0N4SVT2 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 3 0.816 1 1 1 66.02 66.02 3 5.8492E-08 23943 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.24 102.31 69.355 54.584 19.325 49.912 47.73 68.483 65 56 19 46 47 65 2 2 1 2 2 2 15912 4157 2633 4007 9722;9723;9724 11194;11195;11196 11195 3 ECDYSIDGINR Unmodified 1340.5667 0.56667916 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 3.5 0.5 1 1 50.971 50.971 2 7.8859E-07 17096 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.88 80.366 20.244 28.427 0 20.767 0 0 19 28 0 19 0 0 1 1 0 1 0 0 2859.3 4158 287 4008 9725;9726 11197;11198 11197 2 ECEEIIR Unmodified 947.43823 0.43823117 2580 Q8K0E8;CON__P02676 Fgb Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes no 0 0 0 0 2 0 1 41.125 41.125 2 0.055109 12294 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.189 42.579 0 0 38.334 38.156 0 0 0 0 37 37 0 0 0 0 1 1 0 0 6682 4159 2580 4009 9727 11199 11199 1 ECELYVQK Unmodified 1067.4957 0.49574604 3119 Q9DBC7;A2AI69 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes no 0 0 0 0 5 0 1 51.576 51.576 3 0.0048732 16747 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.38 37.087 49.026 95.646 0 80.042 44.657 96.798 46 93 0 74 46 92 1 2 0 2 1 2 3212.9 4160 3119 4010 9728 11200;11201 11200 2 ECEPYRR Unmodified 1008.4447 0.44471353 2713 Q8VEK0;D3YVV1 Tmem30a Cell cycle control protein 50A yes no 0 0 0 1 3 0 1 23.963 23.963 3 0.058583 4606 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.714 48.048 29.53 36.449 55.52 37.132 0 29.848 28 37 55 37 0 28 1 1 1 1 0 1 2782.7 4161 2713 4011 9729 11202 11202 1 ECFGACLFTCYDLLRPDVVLETAWR Unmodified 3090.4402 0.44016878 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 10.5 2.5 1 1 99.216 99.216 4 0.031802 39965 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 30.976 27.448 0 0 9.3321 29.528 27.62 9.0625 0 0 9 28 28 9 0 0 1 2 2 1 2830.8 4162 2185 4012 9730;9731 11203;11204 11204 2 ECGNAHYQR Unmodified 1133.4672 0.46723988 1196 O35465 Fkbp8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 0 3 0 1 20.156 20.156 3 0.028123 3148 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.001 23.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1824.7 4163 1196 4013 9732 11205 11205 1 ECHLNADTVSSK Unmodified 1359.6089 0.60887832 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 7.33 4.03 1 1 1 38.552 38.552 3 2.9895E-15 10487 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.84 113.99 147.83 185.81 63.814 59.252 178.74 76.75 139 185 65 56 176 74 2 2 1 1 2 1 53057 4164 3123 4014 9733;9734;9735 11206;11207;11208 11207 3 ECLAHTPK Unmodified 954.4593 0.45930096 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 0 9.5 3.5 1 1 35.314 35.314 3 0.020321 8605 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.775 30.402 176.44 152.6 152.62 161.87 91.673 194.59 166 157 157 158 93 185 2 2 2 2 1 2 10995 4165 1176 4015 9736;9737 11209;11210 11209 2 ECLPLIIFLR Unmodified 1272.7264 0.72641468 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 11 0 1 91.666 91.666 2 0.012128 29351 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.419 44.321 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 2714.1 4166 1730 4016 9738 11211 11211 1 ECLQALDFLHSNQVIHR Unmodified 2079.032 0.031992191 2106 Q61036 Pak3 Serine/threonine-protein kinase PAK 3 yes yes 0 0 0 0 7 0 1 64.947 64.947 4 0.0013456 21472 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.113 25.24 39.273 45.742 33.124 89.054 41.686 68.1 37 46 37 84 46 65 1 1 1 1 1 1 5177.5 4167 2106 4017 9739 11212 11212 1 ECLQALEFLHSNQVIHR Unmodified 2093.0476 0.047642255 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 0 7 0 1 63.583 63.583 4 0.00018153 20930 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.817 37.742 29.647 0 66.755 76.903 0 39.442 28 0 65 74 0 37 1 0 1 1 0 1 5541.8 4168 1099 4018 9740 11213 11213 1 ECPAIDYTR Unmodified 1123.4968 0.49680868 798 E0CXA9;Q6PEB6;G8JL35;E0CYJ0 Mob4 MOB-like protein phocein yes no 0 0 0 0 3.5 0.5 1 1 44.737 44.737 2 0.00076865 13743 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.73 86.412 78.624 64.615 153.15 114.59 179.16 57.813 74 65 148 111 176 56 2 1 2 2 2 1 14249 4169 798 4019 9741;9742 11214;11215;11216 11216 3 ECPPHTEQR Unmodified 1152.4982 0.49820566 2462 Q8BV13 Cops7b COP9 signalosome complex subunit 7b yes yes 0 0 0 0 2 0.816 1 1 1 21.429 21.429 3 0.00045583 3555 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.523 65.856 20.244 37.543 27.541 8.9874 38.842 14.371 19 37 28 9 38 14 1 2 2 1 2 1 6267.1 4170 2462 4020 9743;9744;9745 11217;11218;11219 11218 3 ECPSVLDYK Unmodified 1109.5063 0.50631073 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 9 4 1 1 56.982 56.982 2 0.0011561 19510 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.4 52.816 119.17 0 168.74 36.364 0 78.884 112 0 158 37 0 74 2 0 2 1 0 1 12780 4171 2840 4021 9746;9747 11220;11221 11221 2 ECSEVQPK Unmodified 975.43315 0.43314579 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 35.985 35.985 2;3 0.0049597 10254 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.738 40.514 319.04 280.48 242.98 327.02 380.91 288.68 300 282 251 319 388 281 2 1 1 2 2 2 25012 4172 2914 4022 9748;9749;9750;9751 11222;11223;11224;11225 11222 4 ECSLQVAEDELVSTLK Unmodified 1819.8873 0.88734459 1426 P21126;F8WHM4 Ubl4a;Ubl4 Ubiquitin-like protein 4A yes no 0 0 0 0 4 0 1 86.274 86.274 3 1.2908E-05 32783 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.208 53.63 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2810.5 4173 1426 4023 9752 11226 11226 1 ECTIEATA Unmodified 893.38005 0.38004758 136 A0A0N4SVS6;P53996 Cnbp Cellular nucleic acid-binding protein yes no 0 0 0 0 1.5 0.5 1 1 45.736 45.736 2 0.024959 14209 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.311 45.126 40.599 0 29.386 18.132 66.874 8.2528 38 0 28 19 65 9 2 0 1 1 2 1 28914 4174 136 4024 9753;9754 11227;11228 11228 2 ECVQPATK Unmodified 931.44332 0.44331654 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 5 0 1 37.12 37.12 2 0.0060128 9716 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.76 74.561 39.479 17.173 22.792 19.409 0 63.96 37 19 23 19 0 60 1 1 1 1 0 1 3745.5 4175 1242 4025 9755 11229 11229 1 EDAANNYAR Deamidation (N) 1023.4258 0.42575222 1313;1794;44;3223 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 0 5.1 5.22 4 1 2 3 31.412 31.412 2;3 5.0231E-17 7708 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 186.3 121.5 1010 1006.1 994.15 890.57 1245.4 1037.7 950 1021 999 885 1254 1004 8 10 6 8 7 8 1077900 4176 44;1313;1794;3223 4026 9756;9757;9758;9759;9760;9761;9762;9763;9764;9765 11230;11231;11232;11233;11234;11235;11236;11237;11238;11239;11240;11241 11240 10;11 12 EDAANNYAR Unmodified 1022.4417 0.44173664 1313;1794;44;3223 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 4.33 3.46 2 1 1 2 1 1 1 30.887 30.887 2;3 1.6695E-58 7149 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 223.87 143.41 19074 16576 19489 17730 25850 21933 17954 17079 19714 17720 26192 21266 16 14 16 17 16 19 5689500 4177 44;1313;1794;3223 4026 9766;9767;9768;9769;9770;9771;9772;9773;9774 11242;11243;11244;11245;11246;11247;11248;11249;11250;11251;11252;11253;11254;11255;11256;11257;11258;11259;11260;11261;11262;11263 11243 22 EDAGAPVEDSQGQTK Unmodified 1530.6798 0.67979466 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 2 0.816 1 1 1 40.205 40.205 2;3 5.669E-37 11965 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 178.23 152.7 59.738 108.15 36.442 28.432 77.404 39.442 56 106 37 28 74 37 1 2 1 1 1 1 16928 4178 1386 4027 9775;9776;9777 11264;11265;11266 11265 3 EDAGTYR Unmodified 810.3508 0.35079637 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 27.705 27.705 2 0.0085835 5660 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.2 64.71 798.74 855.88 826.36 577.38 388.8 881.39 753 868 825 580 426 836 4 4 2 4 4 3 177530 4179 2077 4028 9778;9779;9780;9781 11267;11268;11269;11270 11267 4 EDAIAFAEK Unmodified 992.48148 0.48147619 976 Q9CXZ1;E9QPX3 Ndufs4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 0 5 0.707 1 2 1 59.912 59.912 2;3 0.0009035 21004 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.65 62.858 226.67 230.87 270.22 135.24 286.57 322.13 213 232 268 130 278 307 3 3 3 1 3 3 42375 4180 976 4029 9782;9783;9784;9785 11271;11272;11273;11274 11271 4 EDAMAMVDHCLK Unmodified 1418.5992 0.59924161 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 5 0 1 60.961 60.961 3 0.026106 21177 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.242 19.369 48.79 44.69 57.665 0 66.005 57.813 46 46 56 0 65 56 1 1 1 0 1 1 3022.8 4181 2602 4030 9786 11275 11275 1 EDAPPEDKESESEAK Unmodified 1659.7112 0.71115437 2854 Q99L43;Q6PBC0 Cds2 Phosphatidate cytidylyltransferase 2 yes no 0 0 0 1 1 0 2 39.098 39.098 3;4 6.745E-05 10744 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.589 56.756 29.952 47.988 0 20.056 103.79 57.813 28 47 0 19 102 56 1 2 0 1 2 1 7582.9 4182 2854 4031 9787;9788 11276;11277 11277 2 EDAQLPR Unmodified 827.41373 0.41373097 2285 Q7TN29 Smap2 Stromal membrane-associated protein 2 yes yes 0 0 0 0 3 0 1 36.9 36.9 2 0.058628 10556 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.255 30.138 0 47.85 65.461 44.845 81.433 96.814 0 46 65 46 83 93 0 1 1 1 1 1 8292.3 4183 2285 4032 9789 11278 11278 1 EDDFLNNAMSSLYSGWSSFTTGASK Unmodified 2714.1806 0.18062608 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 8 0 1 102.99 102.99 4 0.023275 36192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 29.934 17.738 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 405.74 4184 3453 4033 9790 11279 11279 1 EDDGANIVCSVNHESLK Unmodified 1885.8476 0.84760504 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 4 0.816 1 1 1 54.702 54.702 3 7.634E-06 18505 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.846 74.081 19.962 64.643 48.013 0 0 39.442 19 65 46 0 0 37 1 2 1 0 0 1 9256.1 4185 1152 4034 9791;9792;9793 11280;11281;11282 11281 3 EDDKPETVIK Unmodified 1172.5925 0.5924832 3321 Q9WTP7;F6RP11 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 1 4 0 1 47.28 47.28 3 0.0079197 14954 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.408 36.971 217.29 140.3 150.62 0 213.38 0 204 148 148 0 204 0 1 1 1 0 1 0 9094.4 4186 3321 4035 9794 11283 11283 1 EDDLETSEK Unmodified 1064.451 0.45096392 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 1 0 1 42.952 42.952 2 0.0029497 12108 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.732 55.578 0 39.368 0 48.902 73.179 57.608 0 37 0 46 74 56 0 1 0 1 1 1 4343.1 4187 3322 4036 9795 11284 11284 1 EDDRETLVSQCR Unmodified 1506.6733 0.67326949 2596 Q8K298;A0A1L1SS34 Anln Actin-binding protein anillin yes no 0 0 0 1 1 0 1 35.043 35.043 3 0.00184 9053 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.65 35.351 20.346 8.2041 0 29.933 35.678 48.018 19 9 0 28 37 46 1 1 0 1 1 1 2240.4 4188 2596 4037 9796 11285 11285 1 EDDSLTIFGVAER Unmodified 1450.694 0.69398816 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 3.5 0.5 1 1 72.35 72.35 3 2.9256E-05 26919 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.19 69.359 0 9.576 0 9.4714 19.439 0 0 9 0 9 19 0 0 1 0 1 1 0 12180 4189 20;2354 4038 9797;9798 11286;11287 11286 2 EDENAEPVGTTYQK Unmodified 1579.7002 0.70019575 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 0 3 0 1 45.952 45.952 3 0.014406 14790 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.967 21.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4190 3267 4039 9799 11288 11288 1 EDEVEEWQHR Unmodified 1355.5742 0.57420737 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 1 0 1 43.112 43.112 3 0.0020256 12183 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.056 33.558 20.265 0 20.456 0 38.702 0 19 0 19 0 37 0 1 0 1 0 1 0 3121.1 4191 1451 4040 9800 11289 11289 1 EDFEEAR Unmodified 894.37193 0.37192574 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 13 0 1 37.597 37.597 2 0.065267 10294 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.492 30.6 0 77.131 95.998 0 0 127.92 0 74 93 0 0 120 0 1 1 0 0 1 6486.7 4192 1393 4041 9801 11290 11290 1 EDGAHPADTQDVVEDALR Unmodified 1936.8763 0.87626263 2486 Q8C0L0 Tmx4 Thioredoxin-related transmembrane protein 4 yes yes 0 0 0 0 1.5 0.5 1 1 54.85 54.85 3 1.2877E-07 16989 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.51 71.514 39.666 6.9013 20.221 28.322 57.26 28.214 37 9 19 28 56 28 1 1 1 2 1 1 13485 4193 2486 4042 9802;9803 11291;11292 11291 2 EDGGTLGVFSPK Unmodified 1205.5928 0.59281755 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;Q60575;A2AH75 Kif1a;Kif1b Kinesin-like protein;Kinesin-like protein KIF1A;Kinesin-like protein KIF1B yes no 0 0 0 0 6 0 1 63.31 63.31 3 0.00018775 21638 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.593 50.92 69.745 0 0 0 37.384 38.375 65 0 0 0 37 37 1 0 0 0 1 1 3396 4194 24 4043 9804 11293 11293 1 EDGISAAK Unmodified 789.38685 0.38684752 1411 P18872 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes yes 0 0 0 0 6 3.58 1 1 2 1 40.944 40.944 2;3 0.002771 12007 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.52 37.226 346.16 243.64 225.54 359.45 489.27 567.65 324 241 213 334 488 543 3 2 3 2 3 3 55447 4195 1411 4044 9805;9806;9807;9808;9809 11294;11295;11296;11297;11298 11295 5 EDGLEGQISR Unmodified 1102.5255 0.52546627 2784 Q91ZP9 Necab2 N-terminal EF-hand calcium-binding protein 2 yes yes 0 0 0 0 1 0 1 43.5 43.5 2 0.024343 12349 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.785 31.401 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4196 2784 4045 9810 11299 11299 1 EDGPGIPAEIK Unmodified 1124.5714 0.57135383 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 4 0 1 56.783 56.783 3 0.00041458 19496 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.171 18.131 0 76.861 112.19 74.196 0 0 0 74 111 74 0 0 0 1 1 1 0 0 10385 4197 3174 4046 9811 11300 11300 1 EDGSEVGVGGAQVTGSNTR Unmodified 1818.8344 0.83439782 3245 Q9JLV5;E9Q4T8;F6UY44 Cul3 Cullin-3 yes no 0 0 0 0 2 0 1 42.326 42.326 3 1.6028E-15 12873 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.604 68.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4198 3245 4047 9812 11301 11301 1 EDGTFYEFGDDIPEAPER Unmodified 2085.8803 0.88034496 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 2 0.816 1 1 1 72.324 72.324 3 4.7483E-07 26256 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.385 79.57 69.429 46.276 30.145 71.045 0 29.848 65 46 28 65 0 28 2 2 1 2 0 1 9911.7 4199 2441 4048 9813;9814;9815 11302;11303;11304 11303 3 EDHPFEYR Unmodified 1091.4672 0.46722311 2661 Q8R3R8 Gabarapl1 Gamma-aminobutyric acid receptor-associated protein-like 1 yes yes 0 0 0 0 2 0 1 38.182 38.182 3 0.050249 10984 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 43.083 27.202 0 19.751 27.844 28.437 26.983 29.078 0 19 28 28 28 28 0 1 1 1 1 1 1824 4200 2661 4049 9816 11305 11305 1 EDHSLEHR Unmodified 1021.4577 0.45772105 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 0 1 0 1 19.35 19.35 3 0.00079044 2906 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.15 65.746 44.718 30.488 32.573 13.361 0 44.772 42 32 32 14 0 42 2 2 1 1 0 2 7070.1 4201 1671 4050 9817 11306;11307 11306 2 EDIHAGGGGAR Unmodified 1038.4843 0.48427016 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 2.5 0.5 1 1 24.016 24.016 3 5.3577E-05 4531 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.009 63.399 29.872 154.55 203.8 224.96 294.74 162.68 28 148 204 222 297 158 1 3 3 4 4 3 27965 4202 2985 4051 9818;9819 11308;11309;11310;11311 11309 4 EDINSIEIVGGATR Unmodified 1472.7471 0.74708636 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 4.5 0.5 1 1 61.43 61.43 2;3 0.00010629 21567 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.076 59.848 0 19.907 18.488 19.665 0 0 0 19 19 19 0 0 0 1 1 1 0 0 12875 4203 1581 4052 9820;9821 11312;11313 11312 2 EDIRPEEIADQELAEAIQK Unmodified 2196.091 0.091006437 448 A2ADY9 Ddi2 Protein DDI1 homolog 2 yes yes 0 0 0 1 3 0 1 75.463 75.463 4 0.00083079 28481 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.848 30.483 0 0 0 0 18.538 38.913 0 0 0 0 19 37 0 0 0 0 1 1 2108.7 4204 448 4053 9822 11314 11314 1 EDITQEFPGK Unmodified 1162.5506 0.55061839 1022 F7CBP1;G3XA17;Q62448;F6UU81 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 5 0 1 59.32 59.32 3 0.039866 20439 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.765 21.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4205 1022 4054 9823 11315 11315 1 EDITTTR Unmodified 834.40831 0.40831125 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 3 0 1 33.172 33.172 2 0.016652 8857 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.296 35.091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4206 568 4055 9824 11316 11316 1 EDIYAVEIVGGATR Unmodified 1491.7569 0.75692277 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 4.5 0.5 1 1 68.902 68.902 2 2.5677E-07 24792 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.72 74.289 39.564 106.36 33.614 37.393 94.26 37.857 37 103 37 37 93 37 1 2 1 1 2 1 10701 4207 1957 4056 9825;9826 11317;11318 11317 2 EDKLECSEELGDLVK Unmodified 1762.8295 0.82949536 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 7 4.28 1 2 1 2 66.351 66.351 3;4 2.8646E-07 23729 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.8 77.042 375.9 437.61 891.03 691.78 832.21 578.35 354 443 878 684 838 560 3 4 6 5 5 4 93863 4208 2185 4057 9827;9828;9829;9830;9831;9832 11319;11320;11321;11322;11323;11324;11325 11323 7 EDKYEEEIK Unmodified 1181.5452 0.54519866 782;926;757;905;1106;1107;1656;209;906;471;2196 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;Q6IRU2;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm4;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain;Tropomyosin beta chain no no 0 0 0 1 8 5 1 1 47.214 47.214 3 0.0043762 15839 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.07 39.34 488.24 787.3 771.36 781.21 882.99 869.18 463 783 791 772 907 839 2 2 2 2 2 2 52706 + 4209 905;906;1106;1107;1656;209;757;782;926;2196;471 4058 9833;9834 11326;11327 11326 2 EDLDKVEPAVIEAQNAVK Unmodified 1967.0211 0.021135958 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 4 0 1 68.385 68.385 4 1.7393E-06 24654 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.12 33.6 79.128 54.248 46 71.045 0 69.29 74 56 46 65 0 65 1 1 1 1 0 1 5632.2 4210 3204 4059 9835 11328;11329 11329 2 EDLECLIQEQMK Unmodified 1534.7007 0.7007298 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 5 0 1 78.229 78.229 3 0.00061635 29270 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.121 41.588 30.044 0 0 30.098 26.907 29.08 28 0 0 28 28 28 1 0 0 1 1 1 1746.4 4211 3274 4060 9836 11330 11330 1 EDLLNNVAR Unmodified 1042.5407 0.5407224 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 5 0 1 55.105 55.105 2 0.014674 18365 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.812 41.73 69.225 63.936 33.256 58.205 54.271 47.487 65 65 37 56 56 46 1 1 1 1 1 1 6774 4212 1702 4061 9837 11331 11331 1 EDLNCQEEEDPMNK Unmodified 1749.6822 0.6821792 3374 Q9Z1D1 Eif3g Eukaryotic translation initiation factor 3 subunit G yes yes 0 0 0 0 1.5 0.5 1 1 52.055 52.055 3 0.00039566 15893 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.533 55.093 9.3875 19.096 29.103 0 19.874 0 9 19 28 0 19 0 1 1 1 0 1 0 1542.7 4213 3374 4062 9838;9839 11332;11333 11332 2 EDLPNLESSEETEQINK Unmodified 1973.9066 0.90655971 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 2 0 1 62.291 62.291 3 0.00081025 21828 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.053 35.131 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1345.8 4214 3174 4063 9840 11334 11334 1 EDLRLPEGDLGK Unmodified 1340.6936 0.69359423 51 A0A0A0MQM0;P63242;J3QPS8 Eif5a Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 0 0 0 1 5.33 0.471 2 1 57.966 57.966 3;4 0.00087221 19764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.716 34.071 117.8 141.64 98.311 161.26 276.18 209.58 111 139 102 157 278 204 2 1 1 2 3 3 27189 4215 51 4064 9841;9842;9843 11335;11336;11337 11335 3 EDLTEIR Unmodified 874.43961 0.43961137 1381 P14869;D3YVM5;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 2.5 0.5 1 1 47.297 47.297 2 0.023689 14895 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.72 30.486 108.34 79.024 157.39 161.6 91.154 49.036 102 83 157 158 93 46 1 1 2 2 1 1 59802 4216 1381 4065 9844;9845 11338;11339 11338 2 EDLVFIFWAPENAPLK Unmodified 1887.9771 0.9770863 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 7.5 0.5 1 1 100.19 100.19 3 2.3475E-06 35660 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.652 54.062 0 9.576 8.6411 45.391 0 9.594 0 9 9 42 0 9 0 1 1 2 0 1 5878.6 4217 1410 4066 9846;9847 11340;11341 11341 2 EDLVQDQDLEAIR Unmodified 1542.7526 0.75256567 2347 Q80ZJ6 Zer1 Protein zer-1 homolog yes yes 0 0 0 0 2.5 0.5 1 1 62.996 62.996 3 0.00046419 22186 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.275 42.717 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1395.2 4218 2347 4067 9848;9849 11342;11343 11342 2 EDLVYQAK Unmodified 964.48656 0.48656157 1715 P62259;D6REF3 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 6 0 1 53.66 53.66 2 0.017191 16896 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.438 15.602 0 59.002 34.785 38.368 0 69.29 0 56 37 37 0 65 0 1 1 1 0 1 2827.5 4219 1715 4068 9850 11344 11344 1 EDMAALEK Unmodified 905.41643 0.41643309 1313;1794;44 A0A0A0MQA5;P68368;P05213;P68369 Tuba4a;Tuba1b;Tuba1a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 0 6 3.27 1 1 2 1 1 53.131 53.131 2;3 0.0033938 17452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.239 34.521 987.37 863.45 1040.1 816.6 1354.4 1131.5 929 874 1030 821 1361 1092 5 6 5 6 6 5 242250 4220 44;1313;1794 4069 9851;9852;9853;9854;9855;9856 11345;11346;11347;11348;11349;11350;11351 11349 7 EDMAALEKDYEEVGVDSVEGEGEEEGEEY Unmodified 3235.3034 0.30343915 1313;1794 P05213;P68369 Tuba1b;Tuba1a Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 1 3.71 3.88 2 1 3 1 81.643 81.643 3;4 1.2935E-25 30651 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.102 75.097 63.75 83.981 70.965 63.089 87.559 96.639 60 84 70 61 88 93 4 5 4 3 3 5 35878 4221 1313;1794 4070 9857;9858;9859;9860;9861;9862;9863 11352;11353;11354;11355;11356;11357;11358;11359 11357 8 EDNEGVYNGSWGGR Deamidation (N) 1539.6226 0.62261413 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3;E9Q1G1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 1 0 0 2 0.707 1 2 1 50.053 50.053 2;3 0.00052706 16712 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.65 66.03 59.731 26.513 37.458 55.5 46.325 38.12 56 28 37 56 46 37 2 1 1 3 1 2 9260.6 4222 3122 4071 9864;9865;9866;9867 11360;11361;11362;11363 11363 1087 4 EDPLIIPVPASENPFR Unmodified 1792.9359 0.93594977 1592 P50153 Gng4 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes yes 0 0 0 0 4.5 0.5 1 1 82.193 82.193 3 0.00048422 31164 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.159 37.777 0 0 29.482 18.278 38.908 0 0 0 28 19 38 0 0 0 1 1 1 0 5859.7 4223 1592 4072 9868;9869 11364;11365 11365 2 EDPLLTPVPASENPFR Unmodified 1780.8996 0.89956426 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 0 0 0 0 7 3.89 1 1 2 1 2 74.254 74.254 2;3 8.8949E-26 27370 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.09 88.482 216.81 72.957 92.144 188.04 180.57 237.6 204 76 88 176 182 227 6 4 3 4 5 6 119440 4224 1777 4073 9870;9871;9872;9873;9874;9875;9876 11366;11367;11368;11369;11370;11371;11372;11373;11374 11371 9 EDPNLVPSISNK Unmodified 1311.667 0.66704513 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 59.692 59.692 2;3 1.8632E-07 20951 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.09 73.714 226.8 514.78 396.7 454.03 579.59 425.04 213 500 409 447 588 412 3 4 3 4 4 3 133420 4225 1417 4074 9877;9878;9879;9880 11375;11376;11377;11378;11379 11375 5 EDPNLVPSISNKR Unmodified 1467.7682 0.76815616 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 1 7.75 3.11 1 1 1 1 51.313 51.313 3 6.0229E-05 16729 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.61 68.291 499.6 537.09 798.8 453.42 672.77 782.43 471 549 780 456 680 752 3 4 3 3 3 4 94260 4226 1417 4075 9881;9882;9883;9884 11380;11381;11382;11383 11380 4 EDPNWWQASHVK Unmodified 1495.6844 0.68442653 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 0 0 0 6 0 1 55.847 55.847 3 0.00033196 18126 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.809 48.703 88.692 72.756 0 109.84 87.559 136.08 83 74 0 102 93 130 1 1 0 1 1 1 5966.4 4227 3241 4076 9885 11384 11384 1 EDQKGQEHTIDELK Unmodified 1668.7955 0.79549312 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 4 0 1 47.601 47.601 4 6.3184E-05 15133 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.527 57.138 0 48.944 0 60.355 45.344 0 0 46 0 56 46 0 0 1 0 1 1 0 2450 4228 1424 4077 9886 11385 11385 1 EDQTEYLEER Unmodified 1310.5626 0.56263964 1322;1354 P07901;B7ZC50;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 13 0 1 44.2 44.2 2 3.4041E-09 13435 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.14 104.55 138.94 108.74 0 118.69 139.94 0 130 111 0 111 139 0 1 1 0 1 1 0 60240 4229 1322;1354 4078 9887 11386 11386 1 EDSARPGAHAK Unmodified 1137.5527 0.55268407 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 1 4.5 0.5 1 1 26.529 26.529 4 0.0011697 4807 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.721 50.623 167.72 146.16 0 178.58 210.28 125.66 157 148 0 167 213 120 2 2 0 2 2 1 8921.8 4230 2985 4079 9888;9889 11387;11388 11388 2 EDSDPEYR Unmodified 1009.3989 0.39886877 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 13 0 1 30.551 30.551 2 0.031661 6924 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.342 23.436 0 28.971 49.116 0 29.288 0 0 28 47 0 28 0 0 1 1 0 1 0 2284.6 4231 2790 4080 9890 11389 11389 1 EDSPLGSPGSQPGTPDEQPVFGK Unmodified 2325.0761 0.076084654 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 3 0 1 64.986 64.986 4 0.0081511 23478 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.676 20.638 50.257 0 29.21 18.681 18.338 19.731 47 0 28 19 19 19 1 0 1 1 1 1 2000.5 4232 2045 4081 9891 11390 11390 1 EDSPQSHVLVMK Unmodified 1368.6708 0.6707503 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 5.5 0.5 1 1 48.863 48.863 3 1.3876E-07 14763 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.839 72.282 99.012 70.88 70.537 107.28 0 0 93 74 74 102 0 0 1 1 1 1 0 0 9241.7 4233 2253 4082 9892;9893 11391;11392 11392 2 EDSQRPGAHLTVK Unmodified 1436.7372 0.73719038 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 1 6 0 1 35.922 35.922 4 0.0079765 8696 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.929 26.693 48.664 74.562 53.382 55.927 111.6 56.512 46 74 56 56 111 56 1 1 1 1 1 1 6940.5 4234 1586 4083 9894 11393 11393 1 EDSSSAEFLEK Unmodified 1240.5459 0.54592694 2207 Q9WV80;Q6NZD2;D3YWH1 Snx1 Sorting nexin-1 yes no 0 0 0 0 3 0 1 56.451 56.451 3 0.00063786 19670 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.652 37.765 0 29.173 37.056 27.564 44.184 77.623 0 28 37 28 46 74 0 1 1 1 1 1 3329.9 4235 2207 4084 9895 11394 11394 1 EDSVKPGAHLTVK Unmodified 1379.7409 0.74087877 486;626 B2RXM2;J3QNY1;V9GX38;A2AL12;Q8BG05 Gm6793;Gm9242;Gm17190;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1 6 0 1 45.386 45.386 4 0.02226 13204 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.789 13.461 117.84 98.439 128.17 134.45 0 178.02 111 102 130 130 0 167 1 1 1 1 0 1 7421.3 4236 626;486 4085 9896 11395 11395 1 EDTEEHHLR Unmodified 1164.516 0.51596421 1271;1586 O88569;A0A0N4SUM2;Q5EBP8;P49312 Hnrnpa2b1;Hnrnpa1 Heterogeneous nuclear ribonucleoproteins A2/B1;Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed no no 0 0 0 0 13 0 1 22.011 22.011 3 0.00012581 3243 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.33 94.269 0 23.226 10.901 15.472 14.554 12.377 0 22 12 15 15 12 0 1 1 1 1 1 1957.4 4237 1271;1586 4086 9897 11396 11396 1 EDTEEYNLR Unmodified 1167.5044 0.50439647 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 5.33 5.44 1 1 1 41.811 41.811 2 3.3889E-106 12726 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 248.99 131.59 374.42 267.25 339.91 391.43 542.97 367.49 352 280 344 386 547 356 2 2 3 4 3 3 106790 4238 626;486 4087 9898;9899;9900 11397;11398;11399;11400 11399 4 EDTLYEPEPQI Unmodified 1332.6085 0.6085272 2053 Q5ND44;Q8C5L6 Inpp5k Inositol polyphosphate 5-phosphatase K yes no 0 0 0 0 2 0 1 70.465 70.465 2 1.7045E-05 25519 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 80.282 0 5.2385 4.8725 5.0113 8.6798 14.676 0 5 5 5 9 14 0 1 1 1 1 1 2253.7 4239 2053 4088 9901 11401 11401 1 EDVGQPQPGR Unmodified 1081.5152 0.51523593 3349 Q9WVA4;A0A0A6YXG6 Tagln2 Transgelin-2 yes no 0 0 0 0 2 0.816 1 1 1 31.794 31.794 2 3.8685E-05 7865 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.86 83.678 68.947 93.092 72.439 86.076 75.45 29.848 65 93 74 84 75 28 2 3 2 3 2 1 12804 4240 3349 4089 9902;9903;9904 11402;11403;11404 11403 3 EDVLTLLLPVMGDSK Unmodified 1628.8695 0.86950968 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 8 0 1 100.98 100.98 3 0.020026 35816 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.005 24.921 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 789.85 4241 2697 4090 9905 11405 11405 1 EDVPAFGPPLPSPPVFQK Unmodified 1920.9986 0.99855002 243 Q5SVL6;A0A171EBK8 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 0 6.5 0.5 1 1 83.22 83.22 3 2.1419E-08 30930 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.772 56.407 79.165 0 39.835 30.604 29.288 39.442 74 0 37 28 28 37 2 0 1 1 1 1 1715.7 4242 243 4091 9906;9907 11406;11407;11408 11406 3 EDVQYDLR Unmodified 1036.4825 0.48253882 1044 F8WHW6;O70161;F7C0X9 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 2.5 0.5 1 1 46.922 46.922 2 0.013301 15160 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.476 20.444 118.45 46.283 69.932 0 56.581 166.81 111 46 65 0 56 158 2 1 1 0 1 2 20980 4243 1044 4092 9908;9909 11409;11410 11410 2 EDVVFTCQVK Unmodified 1223.5856 0.58562368 2224 Q6P6I8;E0CYM8;P97797 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 0 5.5 0.5 1 1 59.152 59.152 3 0.0025288 20382 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.303 40.43 88.129 105.24 67.145 146.02 101.11 56.811 83 102 65 139 102 56 2 1 1 2 1 1 12989 4244 2224 4093 9910;9911 11411;11412 11411 2 EDYIEFASLDGSNR Unmodified 1614.7162 0.71618016 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 3.5 0.5 1 1 69.694 69.694 2;3 0.0042177 25792 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.31 34.337 0 0 20.558 0 18.867 29.31 0 0 19 0 19 28 0 0 1 0 1 1 1292.6 4245 175 4094 9912;9913 11413;11414 11413 2 EDYVDLGVTR Unmodified 1165.5615 0.56151742 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 3 0 1 57.357 57.357 2 0.0099396 19878 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.621 33.264 0 29.792 0 19.879 47.203 0 0 28 0 19 46 0 0 1 0 1 1 0 3386.3 4246 732 4095 9914 11415 11415 1 EEADEYVDIGALNGIFVLGR Deamidation (N) 2180.0637 0.063729054 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 1 0 0 4 0 1 91.965 91.965 3 5.9777E-08 34002 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.788 58.196 0 0 3.246 0 0 3.198 0 0 3 0 0 3 0 0 1 0 0 1 818.23 4247 2020 4096 9915 11416 11416 800 1 EEAESTLQSFR Unmodified 1295.5994 0.59935949 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 4 0.816 1 1 1 52.222 52.222 2;3 5.5995E-06 17681 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.16 67.118 20.207 67.92 104.38 64.888 92.271 48.792 19 65 103 65 92 47 1 2 3 2 2 2 23383 4248 1423 4097 9916;9917;9918 11417;11418;11419 11417 3 EEAGAPDAK Unmodified 886.40323 0.40322587 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 2.5 0.5 1 1 35.175 35.175 2 0.00092321 9747 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.87 62.589 0 20.216 30.296 49.256 54.316 97.588 0 19 28 46 56 93 0 1 1 1 1 2 6974.5 4249 1980 4098 9919;9920 11420;11421 11421 2 EEALQADR Unmodified 930.44067 0.44067401 496 A2AN08;F6SSP6 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 2 0 1 34.561 34.561 2 0.015971 9271 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.645 41.616 49.017 36.689 26.162 37.843 55.208 47.461 46 38 28 37 56 46 1 1 1 1 1 1 3099.9 4250 496 4099 9921 11422 11422 1 EEAPQWLESDSCQK Unmodified 1705.7254 0.72536464 910 E9Q4P1 Wdfy1 yes yes 0 0 0 0 3 0 1 59.444 59.444 3 5.9881E-05 21041 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.908 65.506 39.345 26.513 37.419 18.537 0 0 37 28 37 19 0 0 1 1 1 1 0 0 1830.1 4251 910 4100 9922 11423 11423 1 EEAQAEIEQYR Unmodified 1364.6208 0.62082322 2954 Q9CR51 Atp6v1g1 V-type proton ATPase subunit G 1 yes yes 0 0 0 0 2 0.816 1 1 1 47.494 47.494 2;3 7.799E-08 15001 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.29 78.905 39.701 0 48.745 47.351 59.252 78.259 37 0 47 47 60 75 1 0 2 2 2 3 24426 4252 2954 4101 9923;9924;9925 11424;11425;11426;11427 11425 4 EEAQMEVEQYR Unmodified 1410.6085 0.60854397 3324 Q9WTT4;B0V2H4 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 0 4.75 4.82 1 1 1 1 47.031 47.031 2;3 1.8139E-14 13984 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.33 123.3 326.38 208.05 153.27 303.65 302.13 331.71 306 213 148 288 310 318 5 3 3 4 4 3 75649 4253 3324 4102 9926;9927;9928;9929 11428;11429;11430;11431;11432 11429 5 EEAQQLWEAEK Unmodified 1359.6307 0.63065962 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 3.5 0.5 1 1 60.168 60.168 3 0.00057831 21371 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.479 28.773 98.268 45.026 37.086 0 55.922 107.14 92 46 37 0 56 102 2 1 1 0 1 2 16934 4254 3261 4103 9930;9931 11433;11434 11433 2 EEASDYLELDTIK Unmodified 1524.7195 0.71953421 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 3.5 0.5 1 1 71.47 71.47 2;3 6.1593E-05 25965 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.138 65.079 0 9 60.592 0 93.306 115.66 0 9 56 0 93 111 0 1 1 0 1 1 13022 4255 1324 4104 9932;9933 11435;11436 11436 2 EEASNFR Unmodified 851.37735 0.37734547 1253 O70435;E0CX62 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 0 6 4.97 1 1 1 32.266 32.266 2 0.0055125 8447 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 133.81 82.847 206.74 202.8 387.89 225.81 332.78 211.28 195 204 380 219 335 204 2 1 3 1 3 2 71314 4256 1253 4105 9934;9935;9936 11437;11438;11439 11438 3 EEATAAPDPAGR Unmodified 1183.5469 0.54692999 3217 Q9JJA9 Grasp General receptor for phosphoinositides 1-associated scaffold protein yes yes 0 0 0 0 1 0 1 34.733 34.733 2 9.2704E-08 8875 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.61 79.386 20.272 0 19.374 0 18.867 29.31 19 0 18 0 19 28 1 0 1 0 1 1 3787.4 4257 3217 4106 9937 11440 11440 1 EECPAVR Unmodified 859.3858 0.38580166 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 1 0 1 29.589 29.589 2 0.0064055 6570 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.37 100.24 83.805 91.899 83.87 0 66.005 57.813 79 93 83 0 65 56 1 1 1 0 1 1 11685 4258 1331 4107 9938 11441 11441 1 EEDFIRPSSR Unmodified 1234.5942 0.59421454 3261 Q9QVP9;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 3.5 0.5 1 1 40.948 40.948 3 0.00312 11934 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.275 43.317 39.414 56.926 0 0 38.702 0 37 56 0 0 37 0 1 1 0 0 1 0 4747.7 4259 3261 4108 9939;9940 11442;11443 11443 2 EEDIDENLLF Unmodified 1235.5558 0.55576334 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 2.5 0.5 1 1 86.876 86.876 2 0.0031737 29111 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 59.288 3.1913 1.8614 3.0777 0.90957 0 5.33 3 2 3 1 0 5 1 1 1 1 0 1 790.77 4260 1817 4109 9941;9942 11444;11445 11444 2 EEDLAALR Unmodified 915.46616 0.46616048 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 3 0 1 50.291 50.291 2 0.014553 16819 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.212 38.014 29.607 57.169 25.011 38.28 35.624 38.425 28 56 28 37 37 37 1 1 1 1 1 1 4445.2 4261 1653 4110 9943 11446 11446 1 EEDLSSFSIADLK Unmodified 1452.6984 0.69840484 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 7.33 4.03 1 1 1 78.734 78.734 3 4.8813E-09 29329 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.914 69.859 29.542 46.196 45.193 37.229 27.578 0 28 46 46 37 28 0 1 1 1 1 1 0 6819.4 4262 1446 4111 9944;9945;9946 11447;11448;11449 11447 3 EEDQATEILQR Unmodified 1330.6365 0.63647328 1502 P32037 Slc2a3 Solute carrier family 2, facilitated glucose transporter member 3 yes yes 0 0 0 0 2 0.816 1 1 1 50.282 50.282 2;3 1.1028E-07 16260 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 112.83 80.083 20.265 39.368 39.749 77.632 131.03 70.881 19 37 38 74 131 70 1 1 2 2 3 3 37734 4263 1502 4112 9947;9948;9949 11450;11451;11452 11451 3 EEDRPPLR Unmodified 1010.5145 0.51450765 3211 Q9JIF7 Copb1 Coatomer subunit beta yes yes 0 0 0 1 1 0 1 29.647 29.647 3 0.0050015 6602 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.74 71.419 39.366 66.506 0 0 0 0 37 65 0 0 0 0 1 1 0 0 0 0 4020 4264 3211 4113 9950 11453 11453 1 EEDTSAGTGDPPR Unmodified 1330.5637 0.56370227 1641 Q3U4W8;P56399;D3YYA5;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 13 0 1 30.171 30.171 2 0.00010636 6715 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.465 51.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4265 1641 4114 9951 11454 11454 1 EEDTSLK Unmodified 820.38143 0.38142779 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 3 0 1 40.492 40.492 2 0.026927 12241 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.046 43.164 137.67 145.12 183.36 166.29 282.47 172.09 130 148 185 167 283 169 1 1 1 1 1 1 14634 4266 1348 4115 9952 11455 11455 1 EEDTSLKLENLSLNPYEGLLLQFPFVA Unmodified 3078.5801 0.58013419 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 13 0 1 112.35 112.35 4 0.0011933 44558 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.669 27.102 0 0 9.738 0 9.0934 9.3345 0 0 9 0 9 9 0 0 1 0 1 1 1612 4267 1348 4116 9953 11456 11456 1 EEEDKAEQAK Unmodified 1175.5306 0.53061123 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 2.33 0.471 2 1 37.004 37.004 3;4 0.00056218 10490 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.496 47.999 246.26 241.41 64.73 332.76 408.21 247.68 231 241 74 315 413 241 3 2 1 3 3 2 23387 4268 1424 4117 9954;9955;9956 11457;11458;11459 11457 3 EEEGLQLR Unmodified 972.48762 0.4876242 2098 Q60960;G3UXT6;G3UZK5;G3UXW7;G3UWJ8 Kpna1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 0 3 0 1 44.699 44.699 2 0.051866 14193 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.88 0 29.759 56.513 0 0 29.288 0 28 55 0 0 28 0 1 1 0 0 1 0 2820.8 4269 2098 4118 9957 11460 11460 1 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Deamidation (N) 1877.8387 0.83867984 1781 P63260;B1ATY1;G3UYG0 Actg1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 1 1 0 0 3.5 2.99 1 4 4 2 1 94.396 94.396 2;3 1.8368E-105 32319 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.03 83.66 295.97 160.56 212.53 177.02 281.05 254.98 279 169 212 176 284 245 12 7 9 6 11 8 152160 4270 1781 4119 9958;9959;9960;9961;9962;9963;9964;9965;9966;9967;9968;9969 11461;11462;11463;11464;11465;11466;11467;11468;11469;11470;11471;11472;11473;11474;11475;11476 11471 708 16 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M);Deamidation (N) 1893.8336 0.83359446 1781 P63260;B1ATY1;G3UYG0 Actg1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 1 1 1 0 2.38 0.696 1 3 4 90.562 90.562 2;3 1.1753E-32 32139 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.632 38.049 72.325 76.112 71.074 64.704 69.821 76.145 68 77 71 64 70 73 8 10 9 10 6 10 26457 4271 1781 4119 9970;9971;9972;9973;9974;9975;9976;9977 11477;11478;11479;11480;11481;11482;11483;11484;11485;11486;11487;11488;11489;11490;11491;11492 11492 708 141 16 EEEIAALVIDNGSGMCK Acetyl (Protein N-term) 1876.8547 0.85466426 1781 P63260;B1ATY1;G3UYG0 Actg1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 1 0 0 0 4.5 3.35 2 2 2 1 1 93.308 93.308 2;3 9.6248E-79 34172 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.22 85.02 75.583 160.13 198.95 176.2 168.21 200.31 71 157 200 174 174 192 5 6 7 7 7 6 100900 4272 1781 4119 9978;9979;9980;9981;9982;9983;9984;9985 11493;11494;11495;11496;11497;11498;11499;11500;11501;11502 11499 10 EEEIAALVIDNGSGMCK Acetyl (Protein N-term);Oxidation (M) 1892.8496 0.84957888 1781 P63260;B1ATY1;G3UYG0 Actg1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed yes no 1 0 1 0 4 0 2 88.186 88.186 3 0.00010231 33376 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.202 20.345 6.3572 9.0484 5.9171 0 0 3.198 6 9 6 0 0 3 1 1 1 0 0 1 2497 4273 1781 4119 9986;9987 11503;11504 11503 141 2 EEEPEAVLPGAQPTLISAISK Unmodified 2178.142 0.14197937 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 5.67 0.471 1 2 79.21 79.21 3;4 9.291E-16 29724 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.737 75.988 20.215 0 28.908 28.881 0 0 19 0 28 28 0 0 1 0 1 1 0 0 2466.8 4274 1412 4120 9988;9989;9990 11505;11506;11507 11505 3 EEEPSVEEALSK Unmodified 1345.6249 0.62490554 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 3 0 1 58.591 58.591 3 0.02416 20592 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.644 18.765 29.856 37.355 0 0 18.867 29.31 28 37 0 0 19 28 1 1 0 0 1 1 4122.9 4275 3275 4121 9991 11508 11508 1 EEERPQIR Unmodified 1055.536 0.53597137 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 1 2 0 1 27.892 27.892 3 0.007103 6240 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.195 53.092 118.38 69.714 62.172 75.842 70.951 86.453 111 74 65 74 74 83 1 1 1 1 1 1 5618.2 4276 728 4122 9992 11509 11509 1 EEETLDTIK Unmodified 1076.5237 0.52373493 2134;2481 Q61655;Q8R3C7;Q8BZY3 Ddx19a;Ddx19b ATP-dependent RNA helicase DDX19A no no 0 0 0 0 2 0 1 53.69 53.69 2 0.023411 17840 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.999 17.552 20.292 18.848 0 9.4841 18.761 19.719 19 19 0 9 19 19 1 1 0 1 1 1 854.05 4277 2134;2481 4123 9993 11510 11510 1 EEFAQSAIR Unmodified 1049.5142 0.5141733 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 4 0 1 46.467 46.467 2 0.034866 14583 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.153 12.317 0 98.952 0 59.485 91.597 85.864 0 93 0 56 93 83 0 1 0 1 1 1 5016.1 4278 2396 4124 9994 11511 11511 1 EEFEHQQK Unmodified 1073.4778 0.47778779 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 4 0 1 34.628 34.628 3 0.0090296 8940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.252 46.158 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 5675.7 4279 1762 4125 9995 11512 11512 1 EEFQQFAGLLQAGIEK Unmodified 1806.9152 0.91521432 1560 P47199;A0A0A6YXR4;A0A0A6YVS7 Cryz Quinone oxidoreductase yes no 0 0 0 0 13 0 1 89.567 89.567 3 3.1268E-05 35487 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.203 76.922 29.632 27.019 46.369 36.638 55.263 47.459 28 28 46 37 56 46 1 1 1 1 1 1 2754.9 4280 1560 4126 9996 11513 11513 1 EEFRPSAPYR Unmodified 1250.6044 0.60438529 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 1 7.33 4.03 1 1 1 40.32 40.32 3 0.0030388 11308 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.85 41.919 108.32 255.21 258.33 189.78 37.384 157.77 102 250 259 185 37 149 2 3 3 2 1 3 66466 4281 1702 4127 9997;9998;9999 11514;11515;11516;11517 11517 4 EEFTSGGPLGQK Unmodified 1248.5986 0.59863121 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 0 5.5 0.5 1 1 56.114 56.114 2;3 4.1555E-07 18919 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.403 54.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4282 1760 4128 10000;10001 11518;11519 11518 2 EEFVETCPGELK Unmodified 1436.6493 0.64934615 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 3.67 0.471 1 2 60.492 60.492 2;3 2.2057E-06 21247 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.44 82.776 50.431 127.93 48.608 101.13 47.564 177.23 47 121 46 93 47 167 2 2 1 2 2 3 17195 4283 1424 4129 10002;10003;10004 11520;11521;11522;11523 11522 4 EEGASPLDFD Unmodified 1078.4455 0.44548461 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 4.75 4.82 1 1 1 1 69.067 69.067 2 1.3056E-05 23513 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.27 111.49 1285.3 843.29 1247 1252.4 1082.6 1446.4 1208 853 1241 1229 1121 1385 8 9 8 7 7 9 707760 4284 1554 4130 10005;10006;10007;10008 11524;11525;11526;11527;11528;11529;11530;11531;11532;11533;11534 11524 11 EEGEAFAR Unmodified 907.40356 0.40356022 1617 P53994;Q3TEG7;P59279 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 0 1.5 0.5 1 1 36.838 36.838 2 0.00034548 9687 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.27 63.598 0 28.828 57.652 27.168 0 59.696 0 28 56 28 0 56 0 1 1 1 0 1 5351.4 4285 1617 4131 10009;10010 11535;11536 11535 2 EEGLNAFYK Unmodified 1069.508 0.50802529 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 61.06 61.06 3 0.003858 21225 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.347 24.158 40.05 55.639 74.452 46.595 18.029 68.776 38 56 74 47 19 65 2 2 2 2 1 2 5849.1 4286 2715 4132 10011;10012 11537;11538 11537 2 EEGPSAFWK Unmodified 1049.4818 0.48181054 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 8.67 3.09 1 1 1 62.484 62.484 2;3 0.0030532 22079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.239 41.936 217.38 101.7 168.1 121.14 0 118.33 204 112 167 120 0 111 2 2 2 2 0 1 8471.7 4287 2396 4133 10013;10014;10015 11539;11540;11541 11541 3 EEGPSSSTGQHR Unmodified 1270.5538 0.55380628 211 E9QMI6;D3Z4N6;E9QP07;A0A0R4J1S2;Q80W14 Prpf40b Pre-mRNA-processing factor 40 homolog B yes no 0 0 0 0 1 0 1 18.868 18.868 3 6.2515E-13 2860 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.46 104.07 0 2.128 0 0 4.0782 3.0816 0 2 0 0 4 3 0 1 0 0 1 1 357.41 4288 211 4134 10016 11542 11542 1 EEGVPTLWR Unmodified 1085.5506 0.55055881 2957 Q9CR62;Q5SX46 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 5 0 1 61.856 61.856 2 0.011376 21669 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.665 38.857 48.956 0 67.536 57.183 0 69.29 46 0 65 56 0 65 1 0 1 1 0 1 9094.6 4289 2957 4135 10017 11543 11543 1 EEGVVLEAVAWLAGGTVYR Unmodified 2018.0473 0.047291129 195 G3UYZ1;A0A0R4J117;Q8R366;A0A0A6YWK7 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 8 0.816 1 1 1 106.3 106.3 3 3.7778E-08 36628 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.53 82.937 6.4187 8.8232 4 7.651 0 4.264 6 9 4 7 0 4 1 2 1 1 0 1 5183.1 4290 195 4136 10018;10019;10020 11544;11545;11546 11545 3 EEHDIPR Unmodified 894.41954 0.41954463 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 1.5 0.5 1 1 27.276 27.276 3 0.0065398 5414 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.614 22.653 20.228 7.8779 19.983 0 96.61 19.437 19 9 19 0 93 19 1 1 1 0 2 1 5482.8 4291 2743 4137 10021;10022 11547;11548 11547 2 EEHDKEER Unmodified 1070.4629 0.46286601 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 1 1 0 1 23.036 23.036 4 0.055243 3756 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.869 21.08 9.3502 28.706 27.236 28.981 0 0 9 28 28 28 0 0 1 1 1 1 0 0 2899.8 4292 2324 4138 10023 11549 11549 1 EEHLCTQR Unmodified 1071.4767 0.47674194 757 D3Z2H9 Tpm3-rs7 no no 0 0 0 0 8 5 1 1 25.202 25.202 3 0.010335 4276 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.546 42.026 0 0 49.772 20.411 18.936 29.848 0 0 46 19 19 28 0 0 1 1 1 1 23429 4293 757 4139 10024;10025 11550;11551 11551 2 EEIAEYR Unmodified 908.42396 0.42396131 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 6 4.97 1 1 1 41.074 41.074 2 0.016482 12385 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.82 51.028 316.37 189.98 91.208 233.81 268.65 203.93 296 195 93 222 269 195 3 3 2 3 3 3 113530 4294 154 4140 10026;10027;10028 11552;11553;11554;11555 11552 4 EEIFGPVLVVLETETLDEAIK Unmodified 2343.2461 0.2461101 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 6 0 1 112.71 112.71 3 3.0833E-17 38262 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.52 93.722 0 2.0939 2.0384 0 2.092 0 0 2 2 0 2 0 0 1 1 0 1 0 621.75 4295 3170 4141 10029 11556 11556 1 EEIFGPVMQILK Unmodified 1402.753 0.75302336 1562 P47738;A0A0G2JEU1;A0A0G2JF60 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 90.662 90.662 3 0.00029304 31993 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.451 32.025 20.207 0 58.194 0 0 20.254 19 0 56 0 0 19 1 0 2 0 0 1 4675.4 4296 1562 4142 10030;10031 11557;11558 11558 2 EEIHEYR Unmodified 974.44576 0.44575938 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 4.75 4.82 1 1 1 1 30.035 30.035 3 0.0023175 7146 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.17 54.136 543.42 416.71 348.83 442.06 709.05 635.4 510 423 348 435 712 614 5 6 3 6 5 6 161620 4297 1557 4143 10032;10033;10034;10035 11559;11560;11561;11562;11563;11564;11565 11561 7 EEIHEYRR Unmodified 1130.5469 0.54687041 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 3 0 1 25.781 25.781 3 0.01235 5468 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.738 52.594 39.079 55.995 57.035 0 0 0 37 56 56 0 0 0 1 1 1 0 0 0 3616.5 4298 1557 4144 10036 11566 11566 1 EEIHNNVEVVHTYR Unmodified 1737.8434 0.84344636 2159 Q62433 Ndrg1 Protein NDRG1 yes yes 0 0 0 0 3.5 0.5 1 1 38.598 38.598 4 8.5817E-05 10824 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.98 57.038 39.366 126.09 0 39.62 43.63 126.68 37 121 0 37 46 120 1 2 0 1 1 2 10889 4299 2159 4145 10037;10038 11567;11568 11568 2 EEIIPVAPEYDK Unmodified 1401.7028 0.70276193 1551 P45952;D6RFD7 Acadm Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 4 0 1 66.936 66.936 2 2.3177E-06 24035 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.29 45.727 0 0 0 20.442 17.268 48.543 0 0 0 19 19 46 0 0 0 1 1 1 2250.2 4300 1551 4146 10039 11569 11569 1 EEIQDSLVGQR Unmodified 1272.631 0.63099397 167 E9Q9N6;E9PYX3;A0A0R4J227;A0A0R4J0B1;Q3T9A3;F6ZS70;E9QMP6;Q05512 Mark2 Serine/threonine-protein kinase MARK2 yes no 0 0 0 0 3 0 1 51.207 51.207 3 0.0055143 17227 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.448 29.724 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 1609 4301 167 4147 10040 11570 11570 1 EEIQESLTSDYFQICK Unmodified 1988.9037 0.90372294 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 5 0 1 77.388 77.388 3 0.00051196 28822 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.499 36.836 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 2365.2 4302 2041 4148 10041 11571 11571 1 EEIVQFFSGLEIVPNGITLPVDPEGK Unmodified 2826.4691 0.46912717 3401 Q9Z2X1;J3QMT0;J3QM80 Hnrnpf Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 0 13 0 1 108.65 108.65 4 0.029557 44169 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 28.023 15.346 5.3085 0 9.493 4.8992 0 9.594 5 0 9 5 0 9 1 0 1 1 0 1 720.44 4303 3401 4149 10042 11572 11572 1 EEIVYQWK Unmodified 1093.5444 0.5444108 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 0 0 0 6.5 0.5 1 1 65.231 65.231 2;3 0.034253 22432 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.346 20.06 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2105.7 4304 1435 4150 10043;10044 11573;11574 11573 2 EELAQQYETILR Unmodified 1491.7569 0.75692277 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 5 0 1 67.447 67.447 2 0.00076903 24145 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.652 22.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4305 3216 4151 10045 11575 11575 1 EELEEVIKDI Unmodified 1215.6234 0.62344898 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 1 8.5 4.5 1 1 82.428 82.428 2;3 0.0037181 31093 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.885 42.7 30.044 0 0 41.534 0 20.254 28 0 0 38 0 19 1 0 0 1 0 1 4808.2 4306 3400 4152 10046;10047 11576;11577 11576 2 EELEGLIQEQMK Unmodified 1445.7072 0.70719538 3275 Q9QYB8;A0A0N4SWF0 Add2 Beta-adducin yes no 0 0 0 0 5 0 1 73.671 73.671 3 0.0013776 27076 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.155 36.276 88.789 53.597 0 0 0 59.696 83 56 0 0 0 56 1 1 0 0 0 1 2515.8 4307 3275 4153 10048 11578 11578 1 EELEVLVQDK Unmodified 1200.6238 0.62378333 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.5 4.5 1 1 69.505 69.505 3 0.0020256 25206 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.056 30.378 0 0 76.229 86.176 28.291 128.18 0 0 74 83 28 121 0 0 1 1 1 2 9237 4308 1850;2212 4154 10049;10050 11579;11580 11579 2 EELFVTSK Unmodified 951.49131 0.49131259 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 6.5 0.5 1 1 59.628 59.628 2;3 0.013903 19171 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.981 35.552 147.8 105.85 137.03 140.85 154.5 125.12 139 111 139 139 158 120 2 2 2 2 2 1 10929 4309 3214 4155 10051;10052 11581;11582 11582 2 EELGGLPEDFLSSLEK Unmodified 1761.8673 0.86726108 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 5.5 0.5 2 2 92.177 92.177 3;4 2.1866E-05 34788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.37 64.537 25.477 45.332 45.522 11.205 42.371 29.848 24 44 44 12 41 28 2 2 2 1 2 2 6578.4 4310 145 4156 10053;10054;10055;10056 11583;11584;11585;11586 11583 4 EELIAELQDCEGLIVR Unmodified 1885.9455 0.94552817 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 4.5 0.5 1 1 84.707 84.707 3 9.9991E-05 32217 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.257 51.377 48.846 17.902 18.033 29.193 17.855 19.745 47 19 19 28 19 19 2 1 1 1 1 1 3937.6 4311 2138 4157 10057;10058 11587;11588;11589 11589 3 EELITNWEQIR Unmodified 1429.7201 0.72014333 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 70.835 70.835 2 9.9051E-08 25856 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.69 76.131 118.63 0 79.879 99.455 54.908 0 111 0 75 93 56 0 3 0 2 2 1 0 11211 4312 551 4158 10059;10060;10061 11590;11591;11592 11590 3 EELQEVR Unmodified 901.45051 0.45051041 2034 Q505D7 Opa3 Optic atrophy 3 protein homolog yes yes 0 0 0 0 5.33 5.44 1 1 1 36.941 36.941 2 0.0088337 9889 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.58 0 344.28 223.33 377.43 198.88 337.67 417.83 324 232 371 204 343 401 3 2 3 2 2 3 101520 4313 2034 4159 10062;10063;10064 11593;11594;11595 11593 3 EELTLEGIK Unmodified 1030.5546 0.55464113 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 5 0 1 64.444 64.444 3 0.0032724 22756 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.016 17.107 50.222 18.532 19.344 30.079 65.95 19.168 47 19 19 28 65 19 2 1 1 1 2 1 1709 4314 1345 4160 10065 11596;11597 11597 2 EELYQNLTR Unmodified 1164.5775 0.57750184 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 53.389 53.389 2;3 2.1823E-08 17050 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 167.12 99.629 434.36 341.53 324.11 441.59 308.54 271.96 408 353 320 427 318 260 3 3 3 4 2 2 80104 4315 551 4161 10066;10067;10068;10069 11598;11599;11600;11601 11599 4 EEMLEIVQAIYK Unmodified 1464.7534 0.75341729 1832 P84075;E9PV73;A2A7R5 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 0 8.8 2.23 2 1 1 1 90.533 90.533 2;3 2.203E-08 32899 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.66 81.856 217.41 288.7 183.92 110.36 26.238 205.27 205 288 186 111 28 195 7 7 4 4 2 4 41522 4316 1832 4162 10070;10071;10072;10073;10074 11602;11603;11604;11605;11606;11607;11608;11609 11606 8 EENQTGPTTTPSDTQDLDMK Unmodified 2206.9536 0.95358626 3360 Q9Z0P4 Palm Paralemmin-1 yes yes 0 0 0 0 2 0 1 53.013 53.013 3 0.00036007 17504 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.968 32.481 0 18.366 47.032 36.777 45.776 18.948 0 18 46 37 46 19 0 1 1 1 1 1 1845.5 4317 3360 4163 10075 11610 11610 1 EENVATFR Unmodified 964.46141 0.46140945 889 E9Q2X2;Q6P9K9 Nrxn3 Neurexin-3 yes no 0 0 0 0 3 0 1 42.293 42.293 2 0.015793 13093 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.334 44.819 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4318 889 4164 10076 11611 11611 1 EEPDIYQIAK Unmodified 1204.5976 0.59756858 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 4 0 1 61.917 61.917 3 0.0022613 21877 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.297 28.338 0 0 20.558 0 38.702 0 0 0 19 0 37 0 0 0 1 0 1 0 1549.7 4319 640 4165 10077 11612 11612 1 EEPFFPPPEEFVFIHAVPVEER Unmodified 2640.29 0.2900406 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 4.5 0.5 1 1 87.829 87.829 3 1.6287E-09 33310 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.295 56.303 18.657 0 0 0 9.414 0 18 0 0 0 9 0 2 0 0 0 1 0 3945.1 4320 1873 4166 10078;10079 11613;11614 11613 2 EEPILTLVDEAIIK Unmodified 1581.8865 0.88653996 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 5.5 0.5 1 1 95.815 95.815 3 4.9406E-17 35481 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.07 91.434 0 21.768 0 15.149 8.1403 16.824 0 21 0 14 9 16 0 2 0 1 1 1 3792 4321 1388 4167 10080;10081 11615;11616 11615 2 EEQAAAEK Unmodified 874.40323 0.40322587 1374 P14206 Rpsa 40S ribosomal protein SA yes yes 0 0 0 0 5 0 1 69.755 69.755 2 0.047716 25217 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.567 7.1037 98.685 100.19 100.61 72.764 112.76 0 93 102 102 74 111 0 1 1 1 1 1 0 28574 4322 1374 4168 10082 11617 11617 1 EEQAPQNK Unmodified 942.44067 0.44067401 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79;A0A1B0GRC1;A0A1B0GRS2 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 5.5 4.39 1 1 1 1 30.806 30.806 2 2.1162E-07 7806 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.03 79.343 65.952 86.671 69.083 81.51 67.819 114.26 62 86 71 77 68 109 2 2 2 2 1 2 15546 4323 1315 4169 10083;10084;10085;10086 11618;11619;11620;11621 11619 4 EEQELHDIHSTR Unmodified 1492.6906 0.69063412 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 0 1.33 0.471 2 1 31.547 31.547 3;4 4.4068E-06 7844 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.011 72.887 128.99 34.604 112.96 123.93 84.343 58.098 121 37 111 121 84 56 3 1 2 3 2 2 16123 4324 1526 4170 10087;10088;10089 11622;11623;11624 11624 3 EEQELQDIQSR Unmodified 1373.6423 0.64228694 451 P35803;A2AEG6 Gpm6b Neuronal membrane glycoprotein M6-b yes no 0 0 0 0 1.5 0.5 1 1 46.053 46.053 2;3 1.8255E-07 13521 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.34 60.389 30.044 0 0 60.545 35.26 19.248 28 0 0 56 37 19 1 0 0 1 1 1 9977.5 4325 451 4171 10090;10091 11625;11626 11625 2 EEQIQDEFFK Unmodified 1311.5983 0.59829686 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 4 0 1 67.397 67.397 3 0.00085812 24254 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.9 53.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4326 556 4172 10092 11627 11627 1 EEQQDILSK Unmodified 1088.535 0.53496832 171 A0A0R4J0F6;Q99KY4;F6SLK1;A0A0G2JFZ0 Gak Cyclin-G-associated kinase yes no 0 0 0 0 4 0 1 50.394 50.394 2 0.01594 16462 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.627 23.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4327 171 4173 10093 11628 11628 1 EEQSPVK Unmodified 815.4025 0.40249759 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3.5 0.5 1 1 35.808 35.808 2 0.027635 10079 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.711 39.607 226.88 262.28 198.51 50.067 170.79 381.02 213 264 195 51 167 362 2 3 2 1 1 3 16565 4328 1382 4174 10094;10095 11629;11630;11631 11630 3 EESAADWALYTYEDGSDDLK Unmodified 2276.9597 0.95971749 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 8 5 1 1 80.238 80.238 3;4 1.0223E-22 30301 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.62 116.75 80.202 54.176 0 71.045 0 78.884 75 56 0 65 0 74 2 2 0 2 0 1 10803 4329 3267 4175 10096;10097 11632;11633 11632 2 EESAASGGAAYSK Unmodified 1226.5415 0.54151026 2037 Q569Z6;Q8BZN7 Thrap3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 0 4 0 1 38.756 38.756 3 0.0029944 10985 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.001 36.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4330 2037 4176 10098 11634 11634 1 EESEAELTK Unmodified 1034.4768 0.47678474 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 2.5 0.5 1 1 44.065 44.065 2 0.00042787 13600 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.07 62.908 118.19 40.714 118.59 87.145 104.77 91.608 111 42 116 88 107 88 2 1 2 2 2 1 8570 4331 3285 4177 10099;10100 11635;11636 11635 2 EESEPEVK Unmodified 945.42911 0.42910627 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.33 5.44 1 1 1 38.676 38.676 2;3 0.01144 11313 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.429 41.574 0 58.657 55.471 174.58 246.96 260.52 0 56 56 167 250 251 0 1 1 3 2 3 16005 4332 510 4178 10101;10102;10103 11637;11638;11639 11638 3 EESEPEVKEDVIEK Unmodified 1658.7887 0.78867641 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 2.5 0.5 1 1 53.942 53.942 3 7.2452E-05 17996 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.614 51.965 108.37 63.558 126.56 0 139.09 183.65 102 65 121 0 139 176 2 1 2 0 2 2 15952 4333 510 4179 10104;10105 11640;11641 11640 2 EESESVLTLK Unmodified 1133.5816 0.58158416 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 6.4 3.38 2 1 1 1 59.303 59.303 2;3 7.3559E-16 20732 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 178.22 94.957 474.22 603.7 417.39 353.78 599.34 441 445 604 427 354 603 426 4 6 5 5 6 5 239390 4334 811;1786 4180 10106;10107;10108;10109;10110 11642;11643;11644;11645;11646;11647 11642 6 EESGKPGAHVTVK Unmodified 1337.6939 0.69392858 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 1 5 0 1 38.36 38.36 4 0.046968 10324 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.163 14.372 127.21 136.91 144.07 161.89 118.08 0 120 139 148 158 120 0 1 1 1 1 1 0 10707 4335 1271 4181 10111 11648 11648 1 EESLGEAR Unmodified 889.41412 0.4141249 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7 6 1 1 33.256 33.256 2 2.9175E-16 8243 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 183.9 102.6 207.63 0 269.51 168.77 167.98 0 195 0 257 172 168 0 1 0 1 1 1 0 47921 4336 2186 4182 10112;10113 11649;11650 11649 2 EESQLHR Unmodified 897.43044 0.43044367 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 1 0 1 22.89 22.89 3 0.014537 3786 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.268 12.708 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1191.2 4337 553 4183 10114 11651 11651 1 EESQTQIR Unmodified 989.47779 0.47778779 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 1.5 0.5 1 1 28.294 28.294 2 0.001189 6350 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 134.15 51.765 93.491 70.814 96.803 77.029 72.441 102.4 88 74 97 77 76 98 2 2 2 2 2 2 17076 4338 1669 4184 10115;10116 11652;11653 11653 2 EETGIEASQLTIIEGFR Unmodified 1891.9527 0.95272204 1636 P56380 Nudt2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 0 4 0 1 78.637 78.637 3 7.9323E-05 29335 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.225 37.89 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2128 4339 1636 4185 10117 11654 11654 1 EETPEVTK Unmodified 931.44984 0.44984171 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3 0 1 41.714 41.714 2 0.0073953 12782 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.57 56.15 88.258 61.834 82.266 75.979 0 78.884 83 65 83 74 0 74 1 1 1 1 0 1 6625.6 4340 1382 4186 10118 11655 11655 1 EETPGQRPVVTETHQLAELNEK Unmodified 2504.2507 0.25069498 2455 Q8BTI8;A0A087WPS9;A0A087WRX8 Srrm2 Serine/arginine repetitive matrix protein 2 yes no 0 0 0 1 4 0 1 51.386 51.386 4 2.2335E-05 16924 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.061 30.691 29.85 38.419 0 0 0 39.442 28 38 0 0 0 37 1 1 0 0 0 1 2301.8 4341 2455 4187 10119 11656 11656 1 EETPGTEWEK Unmodified 1204.5248 0.52479757 2197 Q6IRU5 Cltb Clathrin light chain B yes yes 0 0 0 0 4.83 3.72 1 2 2 1 50.697 50.697 2;3 1.7289E-05 17065 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.91 58.877 216.84 202.9 321.97 166.81 268.33 181.57 204 204 315 167 269 176 4 4 4 3 4 3 39846 4342 2197 4188 10120;10121;10122;10123;10124;10125 11657;11658;11659;11660;11661;11662;11663 11659 7 EEVASTVSSSYR Unmodified 1313.6099 0.60992418 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 6.25 3.96 1 1 1 1 43.517 43.517 2;3 1.8959E-26 12870 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 172.1 109.83 159.85 156.47 70.866 188.43 43.004 97.911 150 158 75 177 46 93 3 3 2 4 1 2 24067 4343 2295 4189 10126;10127;10128;10129 11664;11665;11666;11667 11666 4 EEVEDLCR Unmodified 1048.4495 0.44952413 3368 Q9Z110 Aldh18a1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 0 1 0 1 43.453 43.453 2 0.011829 12315 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.853 50.866 29.877 0 28.017 47.769 44.611 38.169 28 0 28 46 46 37 1 0 1 1 1 1 5187.5 4344 3368 4190 10130 11668 11668 1 EEVEGESLDLCLQQLYK Unmodified 2051.9721 0.97213685 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 4 0 1 79.759 79.759 3 0.031316 29939 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 32.917 16.611 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2024.5 4345 2302 4191 10131 11669 11669 1 EEVEVLK Unmodified 844.4542 0.45419881 746;596 D3Z0V7;E9QLZ1;P62500;H3BLI9;D3YW86;F6VXN4;D3YZZ4;A0A0G2JFZ4;E9Q7M2;Q9EQN3;B1AVF2;Q9Z2S7 Tsc22d1;Tsc22d4;Tsc22d2;Tsc22d3 TSC22 domain family protein 1;TSC22 domain family protein 4;TSC22 domain family protein 3 no no 0 0 0 0 6.25 3.96 1 1 1 1 52.987 52.987 2;3 0.014379 18103 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.6 44.335 495.18 321.99 9 118.42 534.55 297.2 463 334 9 111 526 287 3 3 1 1 3 2 58581 4346 746;596 4192 10132;10133;10134;10135 11670;11671;11672;11673 11670 4 EEVLEEGAK Unmodified 1002.487 0.4869555 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3 0 1 49.196 49.196 3 0.029618 16311 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.368 17.626 49.225 26.473 0 61.208 0 0 46 28 0 56 0 0 1 1 0 1 0 0 4509.2 4347 510 4193 10136 11674 11674 1 EEVPGRR Unmodified 841.44061 0.44061443 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 1 7.5 5.5 1 1 23.325 23.325 3 0.011335 4216 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 104.45 22.813 78.483 196.1 236.79 192.21 246 255.22 74 193 238 193 252 246 1 2 2 2 2 2 44487 4348 1741 4194 10137;10138 11675;11676 11675 2 EEVREILK Unmodified 1014.571 0.5709599 1092 G3XA48;P58044 Idi1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 1 6 0 1 62.769 62.769 3 0.033437 21449 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.962 13.168 0 29.792 0 40.664 46.248 0 0 28 0 38 46 0 0 1 0 1 1 0 2594.3 4349 1092 4195 10139 11677 11677 1 EEVVLNR Unmodified 857.46068 0.46068117 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 3 0 1 41.714 41.714 2 0.043796 12824 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.134 32.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4350 3261 4196 10140 11678 11678 1 EEVVQKEQE Unmodified 1116.5299 0.52988294 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 1 2.5 0.5 1 1 41.653 41.653 3 0.0035061 12714 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.749 54.023 69.468 84.692 0 80.069 101.36 115.43 65 84 0 75 102 111 1 2 0 2 1 2 17375 4351 3333 4197 10141;10142 11679;11680 11680 2 EEVVTIDTWMQGLLKPTCLYGQLPK Unmodified 2918.4922 0.49218758 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 0 0 1 10.7 1.7 1 1 1 97.277 97.277 4;5 1.1687E-08 34911 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.222 49.911 39.58 14.896 20.358 15.302 0 79.95 37 14 19 14 0 75 1 1 1 1 0 2 6612.7 4352 1414 4198 10143;10144;10145 11681;11682;11683 11681 3 EEYEGPNK Unmodified 964.41379 0.41379055 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 3 0 1 39.298 39.298 2 0.010372 11718 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.629 43.853 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4353 2724 4199 10146 11684 11684 1 EEYPGIEIESR Unmodified 1320.6198 0.61976058 2915 Q9CQ86 Mien1 Migration and invasion enhancer 1 yes yes 0 0 0 0 2.5 0.5 1 1 55.286 55.286 2 3.567E-09 18595 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 133.75 81.263 39.193 65.734 46.843 39.956 54.084 77.341 37 65 46 37 56 74 1 2 1 1 2 2 7903.9 4354 2915 4200 10147;10148 11685;11686 11685 2 EFAAGYNVK Unmodified 997.4869 0.48689592 1251 O70325;S4R1E5 Gpx4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial;Glutathione peroxidase yes no 0 0 0 0 13 0 1 53.253 53.253 2 0.025895 17898 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.892 34.998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4355 1251 4201 10149 11687 11687 1 EFADSLGIPFLETSAK Unmodified 1723.8669 0.86686715 1742;2065 P62821;Q5SW88;Q5SW87 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 0 8 2.38 2 1 2 1 89.368 89.368 2;3;4 3.066E-13 32342 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.401 59.987 70.408 126.35 195.91 160.3 38.365 0 66 120 194 158 37 0 3 1 4 5 1 0 57649 4356 1742;2065 4202 10150;10151;10152;10153;10154;10155 11688;11689;11690;11691;11692;11693;11694 11692 7 EFADSLGVPFLETSAK Unmodified 1709.8512 0.85121708 3040 Q9D1G1 Rab1b Ras-related protein Rab-1B yes yes 0 0 0 0 8.67 3.09 1 1 1 85.136 85.136 3;4 9.1907E-05 33222 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.481 53.919 39.522 19.892 49.461 0 28.62 19.437 37 19 47 0 28 19 1 1 2 0 1 1 30969 4357 3040 4203 10156;10157;10158 11695;11696;11697 11697 3 EFAGEDTSDLFLEER Unmodified 1756.7792 0.77917435 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 2.5 0.5 1 1 72.122 72.122 2;3 7.4402E-08 26897 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.4 90.034 20.319 13.526 20.558 15.049 13.453 24.134 19 14 19 14 14 23 1 1 1 1 1 2 6966.1 4358 2222 4204 10159;10160 11698;11699 11699 2 EFANFTFPR Unmodified 1127.54 0.53999412 1979 Q3UHD6;A0A0G2JF85;A0A0G2JGD5 Snx27 Sorting nexin-27 yes no 0 0 0 0 8 0 1 69.433 69.433 2 0.011719 23035 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.233 47.979 0 86.554 105.17 0 0 0 0 83 102 0 0 0 0 1 1 0 0 0 8615.4 4359 1979 4205 10161 11700 11700 1 EFAPSDEELDSYR Unmodified 1556.6631 0.66308196 2068 Q5SX56;Q7TNE3 Spag7 Sperm-associated antigen 7 yes no 0 0 0 0 2 0 1 58.893 58.893 3 0.0022128 20199 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.199 41.639 0 0 9.738 0 28.657 18.37 0 0 9 0 28 18 0 0 1 0 1 1 1512 4360 2068 4206 10162 11701 11701 1 EFAQVIK Unmodified 833.4647 0.46470391 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 7 0 1 57.702 57.702 3 0.018342 18149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.682 27.14 39.701 48.944 0 129.53 144.61 123.79 37 46 0 121 148 120 1 1 0 2 2 2 2835.9 4361 1857 4207 10163 11702;11703 11702 2 EFATLIIDILSEAK Unmodified 1561.8603 0.86032521 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 10.8 1.48 1 1 1 1 116.33 116.33 3 1.0136E-05 34956 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.03 73.147 0 12.672 5.7317 9 9.414 9 0 12 6 9 9 9 0 1 1 1 1 1 5431.4 4362 2046 4208 10164;10165;10166;10167 11704;11705;11706;11707;11708 11706 5 EFCENLSADCR Unmodified 1399.5496 0.54964888 2272 Q76MZ3;G3UWL2 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 0 3.5 0.5 1 1 49.156 49.156 2;3 8.1705E-08 16284 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115 74.28 69.557 37.355 0 41.216 16.901 89.062 65 37 0 38 19 84 2 1 0 2 1 2 8403.9 4363 2272 4209 10168;10169 11709;11710 11709 2 EFDALLINPR Unmodified 1186.6346 0.63462279 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 6.5 0.5 1 1 71.583 71.583 2 0.0028785 24652 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.998 49.812 158.01 157.46 0 78.392 234.78 125 148 158 0 74 232 120 2 2 0 1 2 1 19968 4364 3307 4210 10170;10171 11711;11712 11712 2 EFDEDLEDKTENDK Unmodified 1725.7217 0.72171905 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 1 2 0 1 56.609 56.609 3 0.038886 19214 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.789 15.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4365 402;3384 4211 10172 11713 11713 1 EFDELSPSAQR Unmodified 1277.5888 0.58879481 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 3.25 0.829 1 1 2 51.866 51.866 2;3 8.9162E-17 17141 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.75 86.861 98.09 64.604 75.946 50.278 9.414 158.83 92 65 74 46 9 149 2 2 2 1 1 2 16137 4366 1242 4212 10173;10174;10175;10176 11714;11715;11716;11717 11717 4 EFDHDRK Unmodified 945.43044 0.43044367 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 4 0 1 30.416 30.416 4 0.010199 7105 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.109 6.1943 0 0 89.806 0 97.278 0 0 0 83 0 93 0 0 0 1 0 1 0 4964.7 4367 1424 4213 10177 11718 11718 1 EFDLTKEEDLAALR Unmodified 1648.8308 0.83081599 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 1 4.5 0.5 1 1 69.433 69.433 3 0.0013698 25154 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.784 43.981 0 133.2 91.767 94.887 68.719 125.96 0 130 93 93 74 120 0 2 1 1 1 1 16595 4368 1653 4214 10178;10179 11719;11720 11719 2 EFDSDSLR Unmodified 967.42469 0.42468959 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R1U4 Ank3 Ankyrin-3 yes no 0 0 0 0 3 0 1 46.914 46.914 2 0.0089371 15154 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.54 48.859 39.701 0 0 0 36.688 58.649 37 0 0 0 37 56 1 0 0 0 1 1 7674.9 4369 3450 4215 10180 11721 11721 1 EFDSISR Unmodified 852.39775 0.39774656 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 9 4 1 1 43.838 43.838 2 0.018664 13143 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.92 34.438 420.33 437.24 218.05 539.2 568.8 229.48 395 441 226 515 575 223 2 2 1 2 2 1 65227 4370 1478 4216 10181;10182 11722;11723 11723 2 EFDYVINDLTAVPISTSPEEDSTWDFLR Unmodified 3258.5245 0.5244698 1845 P97355 Sms Spermine synthase yes yes 0 0 0 0 13 0 1 104.69 104.69 3 5.1479E-06 42634 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.596 31.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4371 1845 4217 10183 11724 11724 1 EFEEDLTGIDDRK Unmodified 1565.7209 0.72093119 1872 Q00915 Rbp1 Retinol-binding protein 1 yes yes 0 0 0 1 3 0 1 59.332 59.332 3 0.006113 20971 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.487 37.236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4372 1872 4218 10184 11725 11725 1 EFEGEEEYLEILGITR Unmodified 1925.9258 0.92583859 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 6.62 3.77 1 2 2 1 2 90.527 90.527 2;3 4.4888E-38 31971 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 155.37 138.88 45.723 48.435 36.949 46.906 47.793 91.549 43 49 37 45 49 87 4 5 3 5 4 6 47262 4373 13 4219 10185;10186;10187;10188;10189;10190;10191;10192 11726;11727;11728;11729;11730;11731;11732;11733;11734 11726 9 EFENLYIENLELR Unmodified 1680.8359 0.83590137 2519 Q8CBE3;H3BJR7;H3BJS1;H3BK66;Q05BF4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 4 0 1 80.086 80.086 3 0.0013695 30044 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.248 46.408 30.006 7.5527 0 0 0 0 28 9 0 0 0 0 1 1 0 0 0 0 1904.7 4374 2519 4220 10193 11735 11735 1 EFFNFLPLSSQDPAPIR Unmodified 1976.9996 0.99961265 2873 Q99MN9;E9Q1J7;D3YZC1 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 9 0.816 1 1 1 90.516 90.516 3 0.0049108 32006 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.059 25.12 20.387 20.216 9.3409 29.681 19.465 40.508 19 19 9 28 19 38 1 1 1 2 1 2 10476 4375 2873 4221 10194;10195;10196 11736;11737;11738 11737 3 EFFQDDVFPDTAVTWEPALSAK Unmodified 2512.1798 0.17982144 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 0 6 0 1 92.811 92.811 3 0.00013512 35116 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.852 47.539 9.5582 8.7783 9.1631 0 0 0 9 9 9 0 0 0 1 1 1 0 0 0 1099.5 4376 3053 4222 10197 11739 11739 1 EFFVGLSK Unmodified 925.49092 0.49091866 2980;2861 Q9CWS0;D3YU15;G3UZR0;O08972;Q99LD8 Ddah1;Ddah2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1;N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 no no 0 0 0 0 10 1.87 1 1 1 1 71.493 71.493 2 0.0032957 21275 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.92 70.75 718.67 813.47 758.56 667.33 1000.4 756.03 676 822 777 655 1008 736 3 4 4 3 3 3 99293 4377 2980;2861 4223 10198;10199;10200;10201 11740;11741;11742;11743 11742 4 EFGASECISPQDFSK Unmodified 1700.7352 0.73520105 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 6 0 1 66.254 66.254 3 0.02068 22982 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.808 26.182 69.522 44.256 0 69.712 70.866 97.116 65 46 0 65 74 93 1 1 0 1 1 1 3673.8 4378 1474 4224 10202 11744 11744 1 EFGEEALNSLQK Unmodified 1363.662 0.66195975 2466 Q8BVU5;A2AH27 Nudt9 ADP-ribose pyrophosphatase, mitochondrial yes no 0 0 0 0 5 0 1 67.699 67.699 3 0.016012 24000 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.549 19.944 49.128 45.631 0 0 0 39.442 46 46 0 0 0 37 1 1 0 0 0 1 2673.3 4379 2466 4225 10203 11745 11745 1 EFGGVGAPPSPGVAR Unmodified 1396.7099 0.709913 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 5 0 1 53.648 53.648 3 0.0048585 17611 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.332 23.774 30.044 0 0 0 56.89 18.631 28 0 0 0 55 19 1 0 0 0 1 1 3713 4380 927 4226 10204 11746 11746 1 EFGIDPQNMFEFWDWVGGR Unmodified 2329.0262 0.026238111 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 13 0 1 109.41 109.41 3 4.3248E-05 44257 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.453 46.038 4.2616 0 5.1167 6.1009 8.0877 0 4 0 5 6 8 0 1 0 1 1 1 0 611.66 4381 1316 4227 10205 11747 11747 1 EFGPVVIDYGK Unmodified 1222.6234 0.6233894 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7 0 1 71.392 71.392 3 0.048281 24528 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.238 14.633 29.616 26.974 49.086 0 76.454 27.666 28 28 47 0 74 28 1 1 1 0 1 1 5439.2 4382 3204 4228 10206 11748 11748 1 EFGSLPTTPSEQR Unmodified 1447.6943 0.69432251 1254 Q8BH40;O70439 Stx7 Syntaxin-7 yes no 0 0 0 0 5 0 1 54.203 54.203 2 0.0001238 17975 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.228 37.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4383 1254 4229 10207 11749 11749 1 EFHLNESGDPSSK Unmodified 1445.6423 0.64228694 537 Q9EQU5;A2BE93 Set Protein SET yes no 0 0 0 0 5 0 1 46.835 46.835 3 0.0056133 14496 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.482 33.539 88.168 81.01 81.175 74.653 73.975 0 83 83 83 74 74 0 1 1 1 1 1 0 6204.9 4384 537 4230 10208 11750 11750 1 EFHTTGLAWSK Unmodified 1275.6248 0.62478638 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 8 1 1 1 56.662 56.662 3 0.0028589 16246 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.674 36.476 0 126.42 139.27 79.533 0 88.478 0 121 139 74 0 83 0 2 2 1 0 1 12856 4385 1536 4231 10209;10210 11751;11752 11752 2 EFICALSITSR Unmodified 1295.6544 0.65437195 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 10.7 1.7 1 1 1 70.966 70.966 2;3 0.00012799 23118 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.277 45.942 278.47 182.18 291.25 434.7 546.58 498.5 262 188 294 423 558 479 2 1 2 4 4 3 90110 4386 1737 4232 10211;10212;10213 11753;11754;11755;11756 11754 4 EFICALSVTSR Unmodified 1281.6387 0.63872189 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 10 1.87 1 1 1 1 67.175 67.175 2 5.1334E-08 22018 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.98 86.585 157.23 204.67 307.5 236.15 189.01 346.39 148 203 306 232 195 330 2 3 4 3 2 4 58907 4387 2392 4233 10214;10215;10216;10217 11757;11758;11759;11760 11757 4 EFIDHSPK Unmodified 971.47125 0.47124585 2928 Q9CQH3;D3Z568 Ndufb5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 0 5 0 1 43.724 43.724 3 0.016765 12881 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.659 24.723 87.992 80.522 111.08 84.099 0 118.33 83 83 111 83 0 111 1 1 1 1 0 1 15004 4388 2928 4234 10218 11761 11761 1 EFIEGVSQFSVK Unmodified 1368.6925 0.6925316 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 72.936 72.936 2;3 1.0023E-12 24015 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.17 93.252 393.17 396.66 539.18 385.19 417.74 136.55 371 398 538 389 419 130 5 4 6 6 5 3 131010 4389 2164 4235 10219;10220;10221;10222;10223 11762;11763;11764;11765;11766;11767 11766 6 EFIFSELLANLYSCGDQNTLMEESAEQAQR Unmodified 3492.5813 0.58134953 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053;F6RRH9 Dnm1 Dynamin-1 no no 0 0 0 0 10 2.53 1 1 1 2 105.82 105.82 3;4 1.1033E-26 37371 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.701 80.369 7.511 0 16.738 2.0942 19.526 7.3227 7 0 16 2 19 7 1 0 2 1 2 1 17517 4390 118;1534;988 4236 10224;10225;10226;10227;10228 11768;11769;11770;11771;11772;11773 11768 6 EFIFSELLANLYSCGDQNTLMEESAEQAQR Oxidation (M) 3508.5763 0.57626415 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053;F6RRH9 Dnm1 Dynamin-1 no no 0 0 1 0 8 0 1 102.87 102.87 4 2.121E-05 36181 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.783 34.784 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 947.99 4391 118;1534;988 4236 10229 11774 11774 12 1 EFIHILYFR Unmodified 1236.6655 0.66552898 3286 Q9QZB7;A0A1Y7VL71 Actr10 Actin-related protein 10 yes no 0 0 0 0 10.5 0.5 1 1 72.429 72.429 3 0.001739 21758 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.827 42.866 0 0 65.895 48.019 0 0 0 0 65 46 0 0 0 0 2 1 0 0 6753.8 4392 3286 4237 10230;10231 11775;11776 11775 2 EFIIALSVTSR Unmodified 1234.6921 0.69213767 1832;1734;2763 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5;Q91X97;D3YVA2;D3Z2Z8 Hpcal1;Hpca;Ncald Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 0 11.5 0.5 1 1 77.909 77.909 2;3 0.0083721 20840 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 45.257 13.323 9.612 8.9279 46 0 0 0 9 9 46 0 0 0 1 1 1 0 0 0 5823.8 4393 1734;1832;2763 4238 10232;10233 11777;11778 11778 2 EFILSCLAR Unmodified 1107.5747 0.57466507 2728 Q91V36;A0A0R4J002 Nrbp2 Nuclear receptor-binding protein 2 yes no 0 0 0 0 9 0 1 71.501 71.501 2 0.013606 23387 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.856 40.352 79.402 0 0 109.13 125.31 164.85 74 0 0 102 130 158 1 0 0 1 1 1 7252.1 4394 2728 4239 10234 11779 11779 1 EFINLQSALESER Unmodified 1534.7627 0.76273643 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 6 0 1 73.126 73.126 3 0.0021236 26288 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.831 42.299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4395 347 4240 10235 11780 11780 1 EFIQEPAK Unmodified 960.49165 0.49164694 156 A0A0R4J049;Q8CIG8 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 0 5.5 0.5 1 1 52.988 52.988 3 0.016448 17394 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.676 31.561 49.176 36.052 0 30.604 0 0 46 37 0 28 0 0 1 1 0 1 0 0 2079.2 4396 156 4241 10236;10237 11781;11782 11781 2 EFLCLDDPPGPFDSLEESR Unmodified 2221.9838 0.98376417 1931 Q3TLM7;Q8C080 Snx16 Sorting nexin-16 yes no 0 0 0 0 4 0 1 85.672 85.672 3 0.0015446 32581 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.608 27.691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4397 1931 4242 10238 11783 11783 1 EFLDLLGDTITLQDFK Unmodified 1866.9615 0.96149581 243 Q5SVL6;A0A171EBK8 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 0 10 2.16 1 1 1 105.35 105.35 3 7.7724E-08 36528 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.97 90.134 24.591 8.9279 87.251 16.661 48.795 49.315 23 9 81 16 49 47 2 1 3 2 4 2 4089.4 4398 243 4243 10239;10240;10241 11784;11785;11786;11787 11784 4 EFLETQDDYEPSWSLQDK Unmodified 2228.975 0.97497363 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 4 0 2 77.603 77.603 3;4 1.0328E-07 28965 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.69 87.268 0 49.706 18.087 28.646 105.38 0 0 47 19 28 102 0 0 2 1 1 2 0 7958.4 4399 3453 4244 10242;10243 11788;11789 11789 2 EFLGTYNK Unmodified 970.476 0.47599688 3347 Q9WV98;A0A1Y7VL11;A0A1Y7VIZ6 Timm9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 0 9.33 2.62 1 1 1 57.117 57.117 2 0.0037337 19537 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.67 48.633 295.26 301.41 255.25 177.01 165.27 227.06 278 306 251 167 158 213 3 3 2 2 1 2 34461 4400 3347 4245 10244;10245;10246 11790;11791;11792 11792 3 EFLLIFR Unmodified 936.54329 0.54328858 2510 Q8C845;Q9D8Y0 Efhd2 EF-hand domain-containing protein D2 yes no 0 0 0 0 10.5 0.5 1 1 83.597 83.597 2 0.027412 26559 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.35 34.294 52.482 36.657 14.149 45.201 50.784 14.132 49 38 15 43 51 14 1 2 1 2 2 1 13470 4401 2510 4246 10247;10248 11793;11794 11793 2 EFLNVLALTFEDFK Unmodified 1684.8712 0.87122424 682 D3Z5P1;F6ZLN8;F8WI64;D3YUP0;Q0P5W1 Vps8 Vacuolar protein sorting-associated protein 8 homolog yes no 0 0 0 0 10 0 1 110.55 110.55 3 5.579E-05 34161 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.55 52.861 0 0 0 5.2334 12.312 0 0 0 0 5 12 0 0 0 0 1 1 0 440.37 4402 682 4247 10249 11795 11795 1 EFMWALK Unmodified 923.45751 0.45751004 1738 P62774;A0A0J9YV46 Mtpn Myotrophin yes no 0 0 0 0 9 0 1 76.671 76.671 2 0.027467 25762 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.887 60.079 0 67.609 92.775 85.19 0 69.29 0 65 93 83 0 65 0 1 1 1 0 1 3894.1 4403 1738 4248 10250 11796 11796 1 EFNAEVHR Unmodified 1000.4726 0.47264284 1573 P47962;D3YYV8 Rpl5 60S ribosomal protein L5 yes no 0 0 0 0 4 0.816 1 1 1 34.528 34.528 3 0.00099826 8925 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.89 78.499 39.174 55.319 127.41 0 151.5 96.188 37 56 121 0 148 93 1 2 3 0 3 2 16825 4404 1573 4249 10251;10252;10253 11797;11798;11799 11798 3 EFNEDGALAVLQQFK Unmodified 1707.8468 0.84680041 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UWM1;G3XA76 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 6.5 0.5 1 1 88.159 88.159 3 3.0942E-05 32528 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.898 45.036 0 49.058 56.823 18.534 28.987 8.7668 0 47 56 19 28 9 0 2 2 1 1 1 4191.1 4405 218 4250 10254;10255 11800;11801 11801 2 EFNEDGALAVLQQFK Deamidation (N) 1708.8308 0.83081599 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UWM1;G3XA76 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 1 0 0 13 0 1 87.825 87.825 3 0.017921 34651 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.592 20.493 69.229 33.727 58.219 0 65.675 67.416 65 37 56 0 65 65 1 1 1 0 1 1 3267.6 4406 218 4250 10256 11802 11802 74 1 EFNEEGALSVLQQFK Unmodified 1737.8574 0.85736509 2719 Q8VHM5;A2AW41;V9GWW3 Hnrnpr yes no 0 0 0 0 6.5 0.5 1 1 86.952 86.952 3 4.9036E-08 31970 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.31 89.375 0 38.936 45.074 77.312 46.964 39.442 0 37 47 74 47 37 0 1 2 2 1 1 2655.5 4407 2719 4251 10257;10258 11803;11804;11805 11804 3 EFNGLGDCLTK Deamidation (N) 1253.5598 0.55980286 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 1 0 0 6 2.93 2 3 1 1 65.783 65.783 2;3 1.6896E-07 23248 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.17 84.822 519.9 466.36 223.01 523.04 644.48 638.27 487 470 214 490 658 616 4 4 3 5 6 6 92142 4408 1585 4252 10259;10260;10261;10262;10263;10264;10265 11806;11807;11808;11809;11810;11811;11812 11808 600 7 EFNGLGDCLTK Unmodified 1252.5758 0.57578728 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 63.625 63.625 2;3 5.7165E-05 22472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.407 63.112 163.79 98.367 160.83 124.9 113.96 169.44 154 102 160 125 120 162 3 2 3 3 3 3 20465 4409 1585 4252 10266;10267;10268;10269 11813;11814;11815;11816 11813 4 EFNGQHFILEEAITGDFALVK Deamidation (N) 2378.1794 0.17942751 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 1 0 0 6 0 1 94.325 94.325 4 0.0012641 35742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.089 22.286 0 9.576 0 0 18.867 29.31 0 9 0 0 19 28 0 1 0 0 1 1 1058.1 4410 3028 4253 10270 11817 11817 1056 1 EFNKYDTDGSK Unmodified 1302.5728 0.57281039 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 1 10 3 1 1 45.709 45.709 3 0.0035792 12754 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.179 44.741 88.499 0 342.2 299.27 263.47 456.19 83 0 329 297 280 435 1 0 2 2 2 2 22188 4411 2836 4254 10271;10272 11818;11819 11818 2 EFPDLGEVPS Unmodified 1088.5026 0.50260556 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 3.5 0.5 1 1 76.62 76.62 2 0.0020454 28507 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.616 67.287 39.546 7.2267 19.974 30.079 46.774 29.31 37 9 19 28 47 28 2 1 1 1 2 1 8674.7 4412 3193 4255 10273;10274 11820;11821 11821 2 EFPTVPLVK Unmodified 1028.5906 0.59063271 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 9.25 2.28 1 1 1 1 70.935 70.935 2;3 0.0012835 23128 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.906 52.164 187.38 196.71 79.441 210.74 165.92 256.44 176 198 79 200 172 245 3 3 1 3 2 3 20907 4413 2783 4256 10275;10276;10277;10278 11822;11823;11824;11825 11824 4 EFQDYIEPEEGCQGSPQR Unmodified 2167.9117 0.91166186 282 Q6PDL0;A0A1D5RM94;A0A1D5RMC1 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 0 2.5 0.5 1 1 59.824 59.824 3 1.7666E-06 21139 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.837 61.422 9.4447 38.256 19.355 0 0 0 9 38 19 0 0 0 1 2 1 0 0 0 6484 4414 282 4257 10279;10280 11826;11827 11827 2 EFQEQLESAR Unmodified 1235.5782 0.57823012 2878 Q99MR8;A0A0G2JFQ5 Mccc1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes no 0 0 0 0 3 0 1 49.122 49.122 2 0.0055821 16279 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.276 44.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4415 2878 4258 10281 11828 11828 1 EFQLSDSAK Unmodified 1023.4873 0.48728985 1427 P21278 Gna11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 0 0 0 0 6 0 1 54.119 54.119 2 0.002993 17302 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.538 55.969 88.234 52.053 94.583 55.571 0 69.29 83 56 93 56 0 65 1 1 1 1 0 1 4502.3 4416 1427 4259 10282 11829 11829 1 EFSAENVTFWK Unmodified 1356.635 0.63501672 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 13 0 1 74.693 74.693 3 0.049427 28261 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 38.021 18.259 29.511 0 89.657 0 66.005 57.813 28 0 83 0 65 56 1 0 1 0 1 1 4677.5 4417 1854 4260 10283 11830 11830 1 EFSDIFR Unmodified 912.43413 0.43413207 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 6.5 0.5 1 1 66.561 66.561 2 0.028747 22243 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.284 18.971 118.84 51.57 0 0 82.835 115.96 111 56 0 0 83 111 1 1 0 0 1 1 22329 4418 1554 4261 10284;10285 11831;11832 11832 2 EFSGNPIK Unmodified 890.44978 0.44978213 1065 G3UXT7;Q8CFQ9;P56959 Fus RNA-binding protein FUS yes no 0 0 0 0 6.5 0.5 1 1 51.282 51.282 2;3 0.018354 15957 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.37 20.27 216.86 91.61 83.865 169.27 295.36 188.78 203 93 83 158 296 185 2 1 1 1 2 2 14549 4419 1065 4262 10286;10287 11833;11834 11833 2 EFSIDVGYER Unmodified 1213.5615 0.56151742 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 6.6 3.26 1 2 1 1 62.881 62.881 2;3 1.0102E-05 22369 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 131.22 72.939 158.87 149.02 68.231 146.78 141.76 249.66 149 148 74 139 148 238 4 3 1 1 3 5 33500 4420 2836 4263 10288;10289;10290;10291;10292 11835;11836;11837;11838;11839;11840 11835 6 EFSITDLVPYSVTLR Unmodified 1738.9142 0.91415169 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 8.5 0.5 1 1 90.95 90.95 3 0.00070178 32960 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.864 43.611 20.387 0 0 20.608 8.4674 20.254 19 0 0 19 9 19 1 0 0 1 1 1 12945 4421 1581 4264 10293;10294 11841;11842 11841 2 EFSITDVVPYPISLR Unmodified 1734.9192 0.91923707 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 10.5 2.5 1 1 89.195 89.195 2 1.3447E-10 32293 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.98 75.232 30.044 0 19.246 90.665 0 39.442 28 0 19 84 0 37 1 0 1 2 0 2 7328.7 4422 1957 4265 10295;10296 11843;11844 11843 2 EFSMMFK Unmodified 918.39795 0.39794625 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9 0 1 71.251 71.251 2 0.04575 23202 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.674 41.794 128.26 99.88 0 0 0 118.33 120 102 0 0 0 111 1 1 0 0 0 1 15830 4423 551 4266 10297 11845 11845 1 EFSNLISLGTDR Unmodified 1350.6779 0.67794416 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 7 0 1 72.732 72.732 2 0.062173 25182 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.159 17.415 39.238 35.93 47.418 0 0 39.442 37 37 46 0 0 37 1 1 1 0 0 1 4440.9 4424 1669 4267 10298 11846 11846 1 EFSPSFINFVNLCLTK Unmodified 1914.955 0.95497065 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 10 0.816 1 1 1 94.978 94.978 3 8.6219E-06 31025 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.78 84.412 0 58.846 83.922 77.105 28.291 98.331 0 56 84 74 28 93 0 1 3 2 1 2 13485 4425 1567 4268 10299;10300;10301 11847;11848;11849;11850 11848 4 EFSVYMTK Unmodified 1003.4685 0.46846866 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 63.32 63.32 2;3 0.0014507 20858 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.57 68.376 285.91 361.88 474.9 381.23 366.98 455.37 269 361 476 381 380 437 3 3 4 4 3 3 80538 4426 1312 4269 10302;10303;10304;10305 11851;11852;11853;11854 11851 4 EFTAQNLGK Unmodified 1006.5084 0.50835964 2756 Q91WK2 Eif3h Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 0 6 0 1 53.621 53.621 3 0.011059 17030 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.608 29.832 0 0 38.774 28.293 0 59.696 0 0 37 28 0 56 0 0 1 1 0 1 1656.9 4427 2756 4270 10306 11855 11855 1 EFTEAVEAK Unmodified 1022.492 0.49204087 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 53.965 53.965 2;3 0.00024684 17951 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.2 24.911 375.31 226.08 208.94 382.22 53.031 364.12 352 232 209 362 56 343 3 2 1 3 1 3 44572 4428 1788 4271 10307;10308;10309;10310;10311 11856;11857;11858;11859;11860 11858 5 EFTLEFSR Unmodified 1027.4975 0.4974606 1242 O55143;Q8R429;B1ATS4;B1ATS5;E9Q559;Q64518 Atp2a2;Atp2a1;Atp2a3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 0 6 0 1 65.505 65.505 2 0.026664 22599 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.301 44.494 49.225 26.473 0 39.233 64.201 57.864 46 28 0 37 65 56 1 1 0 1 1 1 7168.4 4429 1242 4272 10312 11861 11861 1 EFTMAEIEHFVDPTEKDHPK Unmodified 2399.1104 0.11036167 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 1 5 0 1 73.973 73.973 5 0.0078274 27135 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.577 23.449 0 0 48.977 17.848 0 29.848 0 0 46 19 0 28 0 0 1 1 0 1 1378.7 4430 3002 4273 10313 11862 11862 1 EFVAVTGTEEDR Unmodified 1351.6256 0.62557424 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6.25 3.96 1 1 1 1 52.407 52.407 2 6.6585E-18 17814 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 147.91 108.2 79.699 167.09 57.712 112.87 121.28 80.512 75 163 59 108 121 77 3 4 2 3 3 2 34199 4431 3000 4274 10314;10315;10316;10317 11863;11864;11865;11866 11863 4 EFVEEFIWPAVQSSALYEDR Unmodified 2414.143 0.14304201 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 6 0.816 1 1 1 97.472 97.472 3 6.1285E-11 36621 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.713 78.293 13.868 9.196 15.264 26.813 15.51 5.33 13 9 15 27 15 5 2 1 2 4 2 1 6000.6 4432 1393 4275 10318;10319;10320 11867;11868;11869;11870;11871 11868 5 EFVISDR Unmodified 864.43413 0.43413207 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 0 8.5 4.5 1 1 50.861 50.861 2 0.048867 16944 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.847 2.8719 0 153.98 208.9 58.029 0 127.92 0 148 204 56 0 120 0 2 2 1 0 1 47304 4433 2931 4276 10321;10322 11872;11873 11872 2 EFVISDRK Unmodified 992.5291 0.52909508 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 1 6 0 1 48.148 48.148 3 0.055694 14455 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.867 25.125 77.998 100.75 150.58 70.036 99.509 115.49 74 102 148 74 102 111 1 1 1 1 1 1 4952.6 4434 2931 4277 10323 11874 11874 1 EFVNLYSDYILNK Unmodified 1616.8086 0.80862399 1165 O08759 Ube3a Ubiquitin-protein ligase E3A yes yes 0 0 0 0 8 0 1 84.829 84.829 3 0.0026003 30302 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.265 31.312 29.952 18.196 0 29.902 37.328 0 28 19 0 28 37 0 1 1 0 1 1 0 2823.1 4435 1165 4278 10324 11875 11875 1 EFVTAFK Unmodified 840.43815 0.43815481 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 8.5 0.5 1 1 64.145 64.145 2 0.014379 19877 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.6 28.49 78.203 178.05 236 64.367 111.82 124.73 74 176 231 65 111 120 1 2 2 1 1 1 11736 4436 193 4279 10325;10326 11876;11877 11877 2 EFVTHTK Unmodified 860.43922 0.43921744 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 6.5 0.5 1 1 37.903 37.903 3 0.02165 8872 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.565 32.193 217.22 257.23 285 299.41 437.09 364.89 204 260 291 297 443 354 1 2 2 2 2 2 14698 4437 2904 4280 10327;10328 11878;11879 11879 2 EFVWNPR Unmodified 946.4661 0.4661009 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 0 8 0 1 59.109 59.109 2 0.017579 18160 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.36 69.417 197.16 102.48 139.27 89.511 204.04 0 185 111 139 93 199 0 1 1 1 1 1 0 26388 4438 1376 4281 10329 11880 11880 1 EFYILWTK Unmodified 1098.575 0.57498264 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 10 0 1 82.984 82.984 2 0.017301 26393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.239 38.13 39.132 64.623 113.54 55.927 73.223 46.947 37 65 111 56 74 46 1 2 2 1 1 1 3869 4439 1155 4282 10330 11881;11882 11882 2 EGAAHAFAQYNLDQFTPVK Unmodified 2106.0171 0.017053633 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 0 6.5 0.5 1 1 68.67 68.67 4 6.0007E-08 23271 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.661 56.82 158.05 50.869 82.89 174.94 140.83 172.94 148 56 83 167 148 166 2 1 1 2 2 2 26067 4440 1564 4283 10331;10332 11883;11884 11884 2 EGAAHAFAQYNLDQFTPVK Deamidation (N) 2107.0011 0.0010692176 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 1 0 0 13 0 1 67.772 67.772 3 1.4611E-09 24963 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.72 87.335 48.919 35.336 43.87 79.36 0 0 46 37 46 75 0 0 1 1 1 1 0 0 8546 4441 1564 4283 10333 11885 11885 594 1 EGAALDQDNR Unmodified 1087.4894 0.48941511 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 1 0 1 32.563 32.563 2 0.00098441 7911 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.325 63.515 39.202 45.545 45.189 37.096 34.652 68.301 37 46 46 37 37 65 1 1 1 1 1 1 21525 4442 510 4284 10334 11886 11886 1 EGAECELSR Unmodified 1049.4448 0.44477311 1133 P83093;I1E4X8 Stim2 Stromal interaction molecule 2 yes no 0 0 0 0 1 0 1 34.729 34.729 2 0.0062742 8873 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.787 50.051 0 48.944 0 20.252 27.359 29.067 0 46 0 19 28 28 0 1 0 1 1 1 3966.6 4443 1133 4285 10335 11887 11887 1 EGAEHEEGGNAILVR Unmodified 1579.759 0.75904803 1853 P97467;F8VQA4 Pam Peptidyl-glycine alpha-amidating monooxygenase;Peptidylglycine alpha-hydroxylating monooxygenase;Peptidyl-alpha-hydroxyglycine alpha-amidating lyase yes no 0 0 0 0 1.5 0.5 1 1 39.561 39.561 3 8.6776E-05 11708 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.613 73.36 0 0 0 39.925 27.454 0 0 0 0 37 28 0 0 0 0 1 1 0 3890.4 4444 1853 4286 10336;10337 11888;11889 11889 2 EGAGAVDEEDFIK Unmodified 1378.6252 0.62523989 12 Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0;A0A0N4SVH2 Clasp1 CLIP-associating protein 1 yes no 0 0 0 0 2 0 1 61.211 61.211 3 0.0065406 21349 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.625 33.653 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1469.9 4445 12 4287 10338 11890 11890 1 EGAIIYVIK Unmodified 1004.5906 0.59063271 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 0 0 0 0 7.5 0.5 1 1 70.084 70.084 2 0.0010042 23348 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.66 21.578 59.409 102 150.84 64.525 113.14 88.478 56 102 148 65 111 83 1 2 2 1 1 1 8874.6 4446 634 4288 10339;10340 11891;11892 11892 2 EGALCEENMR Unmodified 1207.4962 0.49615675 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 2 0 1 41.084 41.084 3 0.0047496 12314 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.592 37.752 0 29.792 0 0 27.961 38.644 0 28 0 0 28 37 0 1 0 0 1 1 2307.8 4447 1652 4289 10341 11893 11893 1 EGALDLSGLSAVDTSQLFSIPK Unmodified 2247.1634 0.1634431 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 7 0 1 94.547 94.547 3 0.0017438 34948 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.521 32.238 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 992.66 4448 172 4290 10342 11894 11894 1 EGAPSLLCK Unmodified 973.49027 0.49026674 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 9.5 3.5 1 1 55.099 55.099 2 0.0013939 18828 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.61 60.418 189.92 0 0 222.97 0 0 177 0 0 204 0 0 1 0 0 1 0 0 19329 4449 3355 4291 10343;10344 11895;11896 11896 2 EGASILLDGR Unmodified 1029.5455 0.54547343 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 56.642 56.642 2 0.0066157 18954 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.275 22.462 49.026 113.34 86.957 59.841 167.67 124.2 46 111 83 56 167 121 1 2 1 1 2 2 187500 4450 3170 4292 10345;10346 11897;11898 11897 2 EGCTEVSLLR Unmodified 1162.5652 0.56522259 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 5 0 1 52.147 52.147 2 0.011629 16979 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.216 28.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4451 1873 4293 10347 11899 11899 1 EGCYGDKDEFPGVR Unmodified 1627.6937 0.69367058 2122 Q61282 Acan Aggrecan core protein yes yes 0 0 0 1 4 0 1 50.743 50.743 3 0.0025641 16615 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.528 45.247 39.701 0 0 0 0 49.036 37 0 0 0 0 46 1 0 0 0 0 1 3458.4 4452 2122 4294 10348 11900 11900 1 EGDDAICLAELK Unmodified 1332.6231 0.6231314 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A087WQE1 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 4 0 1 68.717 68.717 3 0.0024692 24741 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.57 35.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4453 360 4295 10349 11901 11901 1 EGDDWGIFPK Unmodified 1162.5295 0.52948901 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 5.5 0.5 1 1 72.587 72.587 3 0.0010125 25971 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.643 54.331 39.302 46.902 27.284 0 0 0 37 47 28 0 0 0 1 1 1 0 0 0 1421.8 4454 2952 4296 10350;10351 11902;11903 11903 2 EGDELCGQEEAFR Unmodified 1538.6307 0.63073598 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 1 0 1 50.326 50.326 2 0.001773 15120 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.536 46.543 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2693.5 4455 1039 4297 10352 11904 11904 1 EGDFTLSLR Unmodified 1036.5189 0.51892433 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 6 0 1 62.217 62.217 2 0.0055377 21147 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.92 33.933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4456 3195 4298 10353 11905 11905 1 EGDGSATTDAAPATSPK Unmodified 1574.706 0.70600941 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 2.75 0.829 2 1 1 39.936 39.936 3;4 1.7854E-08 11865 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 109.07 88.411 59.107 131.33 216.49 62.089 293.54 111.02 56 130 213 65 287 112 1 2 3 1 2 2 47648 4457 1318 4299 10354;10355;10356;10357 11906;11907;11908;11909 11906 4 EGDLITLLVPEAR Unmodified 1424.7875 0.78749461 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 5 0 1 85.998 85.998 3 0.0037417 32919 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.211 30.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 765.93 4458 607 4300 10358 11910 11910 1 EGDLLAAQAR Unmodified 1042.5407 0.5407224 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 7.33 4.03 1 1 1 47.429 47.429 2 0.011 14745 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.816 36.562 88.842 42.953 0 80.882 0 59.696 83 46 0 74 0 56 1 1 0 1 0 1 6031.4 4459 1580 4301 10359;10360;10361 11911;11912;11913 11912 3 EGDLPPLWWHIVTR Unmodified 1717.894 0.89402537 2932 Q9CQJ8 Ndufb9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 0 0 0 0 8 0 1 79.007 79.007 3 6.8604E-05 27555 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.417 42.729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4460 2932 4302 10362 11914 11914 1 EGDLPPLWWHIVTRPR Unmodified 1971.0479 0.047900251 2932 Q9CQJ8 Ndufb9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 0 0 0 1 10 0 1 70.464 70.464 4 0.044235 20656 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.262 16.124 48.834 35.102 58.24 0 48.116 0 46 37 56 0 46 0 1 1 1 0 1 0 4648.3 4461 2932 4303 10363 11915 11915 1 EGDTVIFASDDEQDR Unmodified 1695.7224 0.72238775 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 1.8 0.748 2 2 1 55.83 55.83 2;3 4.7284E-22 17455 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.01 117.13 99.378 50.008 69.148 48.954 45.193 147.15 93 47 65 47 47 139 3 2 2 3 3 4 104750 4462 2301;365;912 4304 10364;10365;10366;10367;10368 11916;11917;11918;11919;11920;11921 11916 6 EGDVLTLLESER Unmodified 1359.6882 0.6881745 1071 G3UYV7;P62858 Rps28 40S ribosomal protein S28 yes no 0 0 0 0 7.33 4.03 1 1 1 76.128 76.128 2;3 3.8865E-09 28778 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.4 76.18 39.292 18.848 27.851 49.804 55.281 29.336 38 19 28 47 56 28 2 1 2 2 2 1 12096 4463 1071 4305 10369;10370;10371 11922;11923;11924;11925;11926;11927;11928 11928 7 EGDYVLFHHEGGVDVGDVDAK Unmodified 2257.0287 0.028740531 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 4 0 1 60.66 60.66 4 3.2169E-11 21299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.849 61.196 0 0 0 32 0 0 0 0 0 32 0 0 0 0 0 1 0 0 5603 4464 2020 4306 10372 11929 11929 1 EGEADGIAELR Unmodified 1158.5517 0.55168102 2708 Q8VEB6 Elac1 Zinc phosphodiesterase ELAC protein 1 yes yes 0 0 0 0 1 0 1 49.622 49.622 2 0.049008 14835 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.297 24.738 19.184 8.0299 15.107 12.216 0 20.254 18 9 15 12 0 19 1 1 1 1 0 1 2392.2 4465 2708 4307 10373 11930 11930 1 EGEAVASAR Unmodified 888.43011 0.43010932 1116 H3BJ67;H3BL92;H3BKQ3 Evi5l yes no 0 0 0 0 1.5 0.5 1 1 28.563 28.563 2 0.019456 6084 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.535 25.514 75.687 27.171 37.027 27.541 45.541 38.142 74 28 37 28 46 37 2 1 1 1 1 1 7729.6 4466 1116 4308 10374;10375 11931;11932 11931 2 EGEDAVIVCDVVSSLPPTIIWK Unmodified 2426.2403 0.24031321 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 9.4 3.01 1 1 1 2 102.03 102.03 3;4 7.7936E-10 37479 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.227 51.806 90.614 41.465 81.382 14.202 95.788 80.184 85 43 77 14 93 77 5 4 4 2 3 4 18011 4467 71;74;949;1367 4309 10376;10377;10378;10379;10380 11933;11934;11935;11936;11937;11938 11933 6 EGEDLIQQLR Unmodified 1199.6146 0.61461563 545;1894 F6QYT9;A2CG49;A0A0A0MQF1;D3Z560;Q0KL02;A0A2I3BRP6 Kalrn;Trio Kalirin;Triple functional domain protein no no 0 0 0 0 4 0 1 60.722 60.722 2 0.007097 21328 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.977 32.674 34.336 0 0 0 0 39.442 32 0 0 0 0 37 1 0 0 0 0 1 5062.2 4468 545;1894 4310 10381 11939 11939 1 EGEDMIAEEHFGSEK Unmodified 1706.7094 0.70938023 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 3 0 1 53.772 53.772 4 0.0033235 18377 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.545 27.967 0 0 38.373 37.281 46.403 0 0 0 37 37 46 0 0 0 1 1 1 0 4615.5 4469 2148 4311 10382 11940 11940 1 EGEEAGPGDPLLEAVPK Unmodified 1706.8363 0.8362953 2107 Q61081 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 0 3 0.816 1 1 1 69.156 69.156 3 1.5842E-06 24910 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.324 58.96 128.02 20.216 124.41 132.08 175.42 75.946 120 19 120 125 176 74 2 1 2 2 3 2 35520 4470 2107 4312 10383;10384;10385 11941;11942;11943 11943 3 EGEFVAQFK Unmodified 1053.5131 0.51311067 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 0 6 0 1 62.96 62.96 3 0.030164 21452 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.137 27.405 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 2716.4 4471 1599 4313 10386 11944 11944 1 EGEGGAGAPDSSSFSSK Unmodified 1568.6591 0.65905922 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3.5 0.5 1 1 45.168 45.168 3 7.6215E-18 14421 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.52 104.86 187.42 58.818 189.55 137.96 142.08 78.884 176 65 185 139 139 74 2 1 2 2 1 1 30287 4472 510 4314 10387;10388 11945;11946 11945 2 EGEHVIDQGDDGDNFYVIDR Unmodified 2291.9931 0.99308331 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 4 4.56 2 1 1 1 59.224 59.224 3;4 3.6944E-13 20921 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.89 95.73 58.457 39.619 110.23 20.767 134.66 77.817 56 38 103 19 130 74 3 2 3 1 3 2 49610 4473 1495 4315 10389;10390;10391;10392;10393 11947;11948;11949;11950;11951;11952 11951 6 EGELTVAQGR Unmodified 1058.5356 0.53563702 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 3 0 1 40.647 40.647 2 2.3273E-09 12334 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 158.57 97.674 59.199 43.063 112.99 94.915 0 157.77 56 46 111 93 0 148 1 1 1 1 0 1 10484 4474 182 4316 10394 11953 11953 1 EGENYQQNCAK Unmodified 1339.5463 0.54627806 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 0 6 4.97 1 1 1 34.715 34.715 3 0.00012411 9587 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.866 75.499 0 68.851 68.26 19.665 75.428 107.65 0 65 65 19 74 103 0 2 2 1 1 3 17790 4475 3151 4317 10395;10396;10397 11954;11955;11956 11955 3 EGERPSLR Unmodified 942.48829 0.4882929 2833 Q99JX4 Eif3m Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 1 3 0 1 27.419 27.419 3 0.0038025 6212 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.12 63.038 0 0 48.098 37.574 0 59.696 0 0 46 37 0 56 0 0 1 1 0 1 4470.5 4476 2833 4318 10398 11957 11957 1 EGFFTNGLTLGAK Deamidation (N) 1354.6769 0.67688153 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 1 0 0 9.33 2.62 1 1 1 78.284 78.284 2;3 1.6465E-19 27827 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 154.36 114.73 157.16 115.17 237.33 134.41 179.38 231.53 148 121 232 139 185 222 2 2 3 3 3 3 35450 4477 3220 4319 10399;10400;10401 11958;11959;11960 11958 1107 3 EGFFTNGLTLGAK Unmodified 1353.6929 0.69286595 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 0 0 0 9 0 1 78.341 78.341 3 0.012215 26515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.382 18.245 0 0 0 29.725 46.751 0 0 0 0 28 46 0 0 0 0 1 1 0 4886.1 4478 3220 4319 10402 11961 11961 1 EGFNALEPFLPILIPNYNPK Unmodified 2285.2096 0.20960543 1062 G3UWZ6;G3X9M0;Q9ER88;G3UWM7 Dap3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 0 9 0 2 103.21 103.21 3;4 0.0082551 36505 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.379 27.629 9.5264 27.842 14.579 0 19.874 14.924 9 27 14 0 19 14 1 2 1 0 1 1 1468.5 4479 1062 4320 10403;10404 11962;11963 11962 2 EGFQLLLNNK Unmodified 1174.6346 0.63462279 1991 Q3UJU9 Rmdn3 Regulator of microtubule dynamics protein 3 yes yes 0 0 0 0 9 0 1 72.41 72.41 3 0.013414 23835 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.284 19.21 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2567.3 4480 1991 4321 10405 11964 11964 1 EGFVEYTEQVVK Unmodified 1426.698 0.6980109 2422 Q8BKC5;Q8BIV3 Ipo5;Ranbp6 Importin-5;Ran-binding protein 6 yes no 0 0 0 0 5 0 1 69.517 69.517 3 5.5413E-05 25147 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.593 48.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4481 2422 4322 10406 11965 11965 1 EGGAAGSNAR Unmodified 888.40496 0.4049572 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 2 0 1 17.246 17.246 2 3.1483E-05 2655 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 123.75 60.462 22.185 43.901 21.251 19.96 33.655 28.888 21 43 23 20 34 28 1 1 1 1 1 1 5293 4482 885 4323 10407 11966 11966 1 EGGAGAVDEDDFIK Unmodified 1421.6311 0.63105355 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22;Q8BSE7;A0A1L1SRY3 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 2.5 0.5 1 1 60.138 60.138 2 0.0028002 20810 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.5 29.989 0 19.758 27.382 59.417 8.4674 29.848 0 19 28 56 9 28 0 1 1 2 1 1 2314.9 4483 934 4324 10408;10409 11967;11968 11967 2 EGGFLLVHTVLK Unmodified 1311.7551 0.75507227 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 0 1 69.765 69.765 3 0.00020464 22511 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.524 44.193 48.74 55.344 57.026 0 67.99 0 46 56 56 0 65 0 1 1 1 0 1 0 9969.4 4484 1412 4325 10410 11969 11969 1 EGGGGGAAADGGAGAAVSR Unmodified 1486.676 0.67604668 2109 Q61097;Q5SXE4 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 0 2 0 1 32.221 32.221 3 0.0061108 8108 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 39.364 18.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4485 2109 4326 10411 11970 11970 1 EGGLGPLNIPLLADVTK Unmodified 1705.9614 0.96143623 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 10 2.16 1 1 1 92.578 92.578 2;3 1.1885E-06 33703 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.5 71.438 54.333 8.6075 58.303 36.428 66.18 62.072 51 9 56 37 65 60 3 1 2 2 2 3 24963 4486 2116 4327 10412;10413;10414 11971;11972;11973;11974 11972 4 EGGLLTLAGAK Unmodified 1028.5866 0.58660996 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;A0A0G2JGY0;D3Z1A1 Qdpr Dihydropteridine reductase yes no 0 0 0 0 9.25 2.28 1 1 1 1 66.629 66.629 2;3 7.4969E-10 24152 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.86 80.328 345.27 129.51 291.06 267.69 419.34 368.36 324 129 281 268 421 355 4 2 3 4 3 3 54536 4487 2464 4328 10415;10416;10417;10418 11975;11976;11977;11978;11979 11979 5 EGGPNNHLLK Unmodified 1077.5567 0.55670682 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 6 0 1 39.123 39.123 3 0.019748 10256 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.466 7.2754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4488 1868 4329 10419 11980 11980 1 EGGSIPVTLTFQEATGK Unmodified 1733.8836 0.88357984 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 5 0 1 72.843 72.843 3 3.2204E-06 26650 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.141 55.545 30.044 0 0 49.624 34.793 77.891 28 0 0 46 38 74 1 0 0 1 1 1 2924.5 4489 3038 4330 10420 11981 11981 1 EGHVGLVQELLGR Unmodified 1405.7678 0.76776223 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R1U2;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 7 0.816 1 1 1 64.994 64.994 3 4.8291E-05 21531 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.756 74.282 20.387 69.16 0 90.643 62.168 48.287 19 65 0 84 65 46 1 1 0 2 2 1 15724 4490 3449;3451;3452 4331 10421;10422;10423 11982;11983;11984 11983 3 EGIECEVINLR Unmodified 1330.6551 0.65510023 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 4 0.816 1 1 1 63.508 63.508 2 4.016E-08 22462 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.39 48.29 208.16 80.976 102.27 27.786 34.384 128 203 83 102 28 37 121 3 2 3 1 1 2 53733 4491 3016 4332 10424;10425;10426 11985;11986;11987;11988 11986 4 EGIHAQQK Unmodified 909.46683 0.46682918 653 CON__P02662 yes yes 0 0 0 0 5 0 1 29.49 29.49 3 0.018156 6201 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.531 24.241 59.686 24.993 46.315 37.181 26.581 29.09 56 28 46 37 28 28 1 1 1 1 1 1 2050.1 + 4492 653 4333 10427 11989 11989 1 EGILFYITPNFR Unmodified 1468.7715 0.77145062 1496 P31648;A0A0N4SVF5 Slc6a1 Sodium- and chloride-dependent GABA transporter 1 yes no 0 0 0 0 9.5 0.5 1 1 87.043 87.043 3 0.00019795 28029 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.739 50.885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4541.3 4493 1496 4334 10428;10429 11990;11991 11991 2 EGILNDDIYCPPETAVLLASYAVQSK Unmodified 2865.4106 0.41062602 1452 P26041 Msn Moesin yes yes 0 0 0 0 6 0 1 97.915 97.915 4 0.048676 36760 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 24.287 11.099 0 29.493 17.911 19.7 0 9.594 0 28 19 19 0 9 0 1 1 1 0 1 1325.3 4494 1452 4335 10430 11992 11992 1 EGILPEKAEEAK Unmodified 1312.6874 0.68744622 1678 P60840 Ensa Alpha-endosulfine yes yes 0 0 0 1 5 0 1 53.739 53.739 3 9.5068E-05 17753 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.689 70.104 118.5 119.69 0 0 178.45 164.4 111 120 0 0 176 159 1 1 0 0 1 1 9021 4495 1678 4336 10431 11993 11993 1 EGIPALDNFLDKL Unmodified 1443.7609 0.76094551 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 1 8.75 2.49 2 1 1 95.995 95.995 2;3 3.2569E-06 34673 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.709 45.016 52.02 29.948 136.54 76.813 38.044 108.71 49 30 130 74 37 103 2 1 3 2 1 3 16197 4496 1652 4337 10432;10433;10434;10435 11994;11995;11996;11997;11998 11996 5 EGIPPDQQR Unmodified 1038.5094 0.50942227 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50;D3YYZ2 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a;Gm5239 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 0 4.12 3.48 1 1 3 2 1 34.481 34.481 2 0.00026819 8998 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.42 79.98 635.86 561.18 645.03 665.02 771.66 845.95 597 558 635 636 775 811 14 12 14 14 14 18 22620 4497 58 4338 10436;10437;10438;10439;10440;10441;10442;10443 11999;12000;12001;12002;12003;12004;12005;12006;12007;12008;12009;12010;12011;12012;12013;12014;12015;12016;12017;12018;12019;12020;12021;12022;12023;12024 12003 26 EGISINCGLLALGNVISALGDK Unmodified 2213.1726 0.172568 875 F8WGN6;E9Q0J5;Q9QXL2 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A yes no 0 0 0 0 10.3 0.471 2 1 107.42 107.42 3;4 4.664E-16 35240 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.128 78.564 26.696 18.313 6.1737 5.465 0 0 25 19 6 5 0 0 3 3 1 1 0 0 4339.8 4498 875 4339 10444;10445;10446 12025;12026;12027 12027 3 EGISSSTTLGFR Unmodified 1253.6252 0.62518031 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 6 0 1 55.414 55.414 2 0.00060353 17922 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.438 50.545 30.044 0 0 0 37.714 28.772 28 0 0 0 37 28 1 0 0 0 1 1 4722.7 4499 2629 4340 10447 12028 12028 1 EGKPCIIIK Unmodified 1056.6002 0.60015154 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 1 9.6 1.85 2 1 1 1 52.801 52.801 3;4 0.0010084 17328 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.815 61.847 3695.4 3224.8 3433.4 3694.6 3167.6 3953.6 3470 3319 3445 3622 3245 3786 5 7 6 7 5 6 603440 4500 1369 4341 10448;10449;10450;10451;10452 12029;12030;12031;12032;12033;12034;12035 12035 7 EGLDLQVPEDANR Unmodified 1454.7001 0.70013617 3163 Q9EPL2 Clstn1 Calsyntenin-1;Soluble Alc-alpha;CTF1-alpha yes yes 0 0 0 0 3.5 0.5 1 1 58.236 58.236 3 0.0033787 20187 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.546 27.271 20.207 0 60.49 0 29.288 39.442 19 0 56 0 28 37 1 0 2 0 1 1 3681 4501 3163 4342 10453;10454 12036;12037 12037 2 EGLEEGDQILR Unmodified 1257.6201 0.62009493 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 2 0 1 55.15 55.15 2 0.0026069 18463 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.655 39.633 20.215 0 28.939 28.181 37.114 8.5349 19 0 28 28 37 9 1 0 1 1 1 1 3585.1 4502 640 4343 10455 12038 12038 1 EGLEETLR Unmodified 945.47673 0.47672516 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 3 0.816 1 1 1 47.377 47.377 2 0.0016174 15339 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 132.08 66.838 188.17 243.59 265.46 324.99 185.04 391.83 176 240 269 315 186 370 2 4 4 5 2 4 194820 4503 1329 4344 10456;10457;10458 12039;12040;12041;12042;12043 12040 5 EGLELPEDEEEK Unmodified 1415.6304 0.63038485 1322;1354 P07901;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 3.83 4.14 1 3 1 1 57.986 57.986 2;3;4 4.6075E-23 19986 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 161.99 83.647 375.39 405.05 261.94 314.84 280.16 587.36 353 408 260 296 279 557 7 7 5 5 5 8 191150 4504 1322;1354 4345 10459;10460;10461;10462;10463;10464 12044;12045;12046;12047;12048;12049;12050;12051;12052 12046 9 EGLELPEDEEEKK Unmodified 1543.7253 0.72534787 1322;1354 P07901;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 1 2.67 0.471 1 2 54.397 54.397 3;4 0.00015556 18610 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.345 63.254 232.46 168.78 344.06 256.76 309.37 425.03 219 176 339 259 321 407 2 2 3 3 3 3 40195 4505 1322;1354 4346 10465;10466;10467 12053;12054;12055 12055 3 EGLLAIFK Unmodified 889.5273 0.52730417 1878;1879 Q02248;E9Q6A9;Q02257 Ctnnb1;Jup Catenin beta-1;Junction plakoglobin no no 0 0 0 0 10 0.816 1 1 1 82.031 82.031 2 0.0061579 28322 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.296 33.174 187.53 193.89 56.781 45.832 170.64 56.438 176 195 56 46 167 56 3 3 1 1 2 1 28402 4506 1878;1879 4347 10468;10469;10470 12056;12057;12058;12059 12056 4 EGLLDPNVK Unmodified 983.52876 0.52876073 210 A0A0R4J1R9;Q8C460 Eri3 ERI1 exoribonuclease 3 yes no 0 0 0 0 9.5 3.5 1 1 57.931 57.931 3 0.00030432 19416 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.308 27.958 0 0 0 48.54 92.43 76.246 0 0 0 46 93 74 0 0 0 1 1 1 3684.7 4507 210 4348 10471;10472 12060;12061 12060 2 EGLLGLQNLLK Unmodified 1196.7129 0.71287311 934;12 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0;A0A0N4SUT7 Clasp2;Clasp1 CLIP-associating protein 2;CLIP-associating protein 1 no no 0 0 0 0 10 0 1 84.639 84.639 3 0.042841 26935 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.266 15.837 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 1544.9 4508 934;12 4349 10473 12062 12062 1 EGLLLWCQR Unmodified 1173.5965 0.59646314 418;310;3209 A1BN54;Q7TPR4;O88990;A0A1L1SV25;P57780;D3Z0L8;D3Z761;Q9JI91 Actn1;Actn3;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 0 8 0 1 69.909 69.909 3 0.00028959 23298 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.64 51.351 20.335 0 8.7335 20.246 0 0 19 0 9 19 0 0 1 0 1 1 0 0 2830.8 4509 418;310;3209 4350 10474 12063 12063 1 EGLPVALEK Unmodified 954.5386 0.53859714 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 6 0 1 62.321 62.321 2 0.0078557 21187 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.098 15.381 48.773 65.152 43.035 57.965 36.039 0 46 65 46 56 37 0 1 1 1 1 1 0 6008.7 4510 2924 4351 10475 12064 12064 1 EGLQDIVIGIIK Unmodified 1296.7653 0.76530261 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 8 0 1 89.69 89.69 3 0.057544 32438 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.75 18.885 9.612 8.9279 0 0 8.727 20.005 9 9 0 0 9 19 1 1 0 0 1 1 1525.4 4511 1221 4352 10476 12065 12065 1 EGMNIVEAMER Unmodified 1277.5744 0.57440707 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 6.25 3.96 1 1 1 1 65.37 65.37 2;3 3.326E-08 23442 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.78 90.08 237.64 143.95 210.39 111.91 18.936 335.79 223 148 204 112 19 315 3 3 2 3 1 4 101620 4512 1404 4353 10477;10478;10479;10480 12066;12067;12068;12069;12070 12070 5 EGMQLISEKPETEAVVK Unmodified 1886.9659 0.96592926 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 5.5 0.5 1 1 62.727 62.727 3 4.3837E-06 21318 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.89 75.939 217.57 62.478 169.38 120.93 65.472 0 204 65 166 121 65 0 2 1 2 2 1 0 13946 4513 2148 4354 10481;10482 12071;12072 12072 2 EGMTAFVEK Unmodified 1010.4743 0.47428232 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 6 0 1 59.518 59.518 3 0.003858 19847 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.347 26.99 0 20.216 0 29.725 46.751 0 0 19 0 28 46 0 0 1 0 1 1 0 3422.2 4514 2401 4355 10483 12073 12073 1 EGNDLYHEMIESGVINLK Unmodified 2059.9885 0.98845562 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 78.843 78.843 3;4 1.624E-09 28995 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.72 74.1 405.92 284.53 295.67 241.05 174.67 409.69 381 297 297 232 176 389 5 5 5 4 3 6 106310 4515 1642 4356 10484;10485;10486;10487;10488;10489 12074;12075;12076;12077;12078;12079 12076 6 EGNDLYHEMIESGVINLK Deamidation (N) 2060.9725 0.97247121 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 1 0 0 6 1 1 1 80.289 80.289 3;4 2.6113E-07 30972 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.007 64.928 88.823 68.042 106.56 53.6 113.63 107.4 83 65 103 56 111 102 2 2 2 2 2 3 10564 4516 1642 4356 10490;10491 12080;12081;12082;12083 12082 626 4 EGPAVVGQFIQDVK Unmodified 1485.7827 0.78274359 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6.33 1.25 1 1 1 77.717 77.717 3 1.118E-11 28315 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.717 66.95 0 39.368 0 29.558 55.589 47.45 0 37 0 28 56 46 0 1 0 1 1 1 2068.4 4517 2264 4357 10492;10493;10494 12084;12085;12086 12085 3 EGPCLVHTITGDLLR Unmodified 1679.8665 0.86648999 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 11 0 1 117.56 117.56 3 0.028555 37065 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.445 14.214 0 0 0 0 7 0 0 0 0 0 7 0 0 0 0 0 1 0 3460.1 4518 3165 4358 10495 12087 12087 1 EGPEAEFQSLTPSQIK Unmodified 1759.8628 0.8628444 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 0 5 0 1 68.467 68.467 3 1.0322E-05 24665 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.786 52.913 19.79 76.811 35.326 0 18.538 38.913 19 74 37 0 19 37 1 1 1 0 1 1 2426.5 4519 2496 4359 10496 12088 12088 1 EGPEGFAR Unmodified 861.39808 0.39808091 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 3 0 1 39.095 39.095 2 0.0080314 11546 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.91 35.595 78.831 0 96.031 94.22 90.659 66.703 74 0 93 93 93 65 1 0 1 1 1 1 14932 4520 974 4360 10497 12089 12089 1 EGQELASVSDDHTCR Unmodified 1702.7217 0.72167625 2981 Q9CWU9 Nup37 Nucleoporin Nup37 yes yes 0 0 0 0 2 0 1 37.954 37.954 3 0.00023542 10909 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.299 59.518 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1328.6 4521 2981 4361 10498 12090 12090 1 EGQGFVSEDEYLEISDIK Unmodified 2056.9477 0.94769624 1103 G5E8G3 Opcml yes yes 0 0 0 0 3 0 1 77.392 77.392 3 1.1798E-06 29302 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.809 56.528 9.5583 19.571 0 0 9.414 0 9 19 0 0 9 0 1 1 0 0 1 0 2021.4 4522 1103 4362 10499 12091 12091 1 EGQGFVSEDEYLEISDIKR Unmodified 2213.0488 0.048807271 1103 G5E8G3 Opcml yes yes 0 0 0 1 4 0 1 69.282 69.282 3 0.0012124 25135 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.34 33.919 9.3713 0 48.024 38.173 26.535 29.091 9 0 46 38 28 28 1 0 1 1 1 1 12969 4523 1103 4363 10500 12092 12092 1 EGQNQLR Unmodified 843.41988 0.41987898 222 A0A0R4J2C6;A0A0R4J2C1;Q9QXJ1;A0A087WRY7 Apbb1 Amyloid beta A4 precursor protein-binding family B member 1 yes no 0 0 0 0 3 0 1 25.318 25.318 2 0.026936 5238 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.142 28.354 15.022 0 0 15.302 0 14.924 14 0 0 14 0 14 1 0 0 1 0 1 1660.5 4524 222 4364 10501 12093 12093 1 EGQVDVASVLLEAGAAHSLATK Unmodified 2165.1328 0.13281167 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 6.5 0.5 1 1 78.849 78.849 3;4 0.0032784 29029 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.645 22.497 118.23 41.779 111.85 115.54 117.97 95.772 111 46 111 111 121 93 2 1 2 1 2 2 10988 4525 3449;3451;3452 4365 10502;10503 12094;12095 12094 2 EGRLEESVALR Unmodified 1257.6677 0.66771383 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 1 3.5 0.5 1 1 43.785 43.785 3 2.3652E-08 13325 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.76 78.325 0 68.44 43.091 57.809 44.149 38.182 0 65 46 56 46 37 0 1 1 1 1 1 6619.3 4526 1786 4366 10504;10505 12096;12097 12097 2 EGRPSGEAFVELESEDEVK Unmodified 2105.9753 0.97530798 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 1 2.33 0.943 1 2 59.404 59.404 3;4 4.349E-07 21127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.122 20.888 188.6 119.57 120.76 126.79 37.714 68.214 177 122 121 121 37 65 5 4 4 3 1 2 16083 4527 1209;1808 4367 10506;10507;10508 12098;12099;12100;12101;12102 12101 5 EGRVDEEIALR Unmodified 1285.6626 0.66262845 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 1 2.5 0.5 1 1 44.873 44.873 3 4.2135E-13 14156 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 146.16 87.464 79.294 0 18.19 79.719 62.312 58.688 74 0 19 75 65 56 2 0 1 2 2 1 10081 4528 811 4368 10509;10510 12103;12104 12104 2 EGSAPPEGDPAFSER Unmodified 1544.6743 0.67431535 896 E9Q3M9 2010300C02Rik yes yes 0 0 0 0 1.33 0.471 2 1 44.69 44.69 2;3 4.6204E-05 12820 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.59 85.461 29.824 39.787 20.456 30.604 19.874 0 28 38 19 28 19 0 2 2 1 1 1 0 18822 4529 896 4369 10511;10512;10513 12105;12106;12107 12105 3 EGSEPPLK Unmodified 855.4338 0.43379771 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 4 0.816 1 1 1 43.276 43.276 2 0.008761 12968 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102 29.454 128.54 131.92 0 99.871 94.548 39.442 120 129 0 93 93 37 2 2 0 2 1 1 16825 4530 1152 4370 10514;10515;10516 12108;12109;12110;12111 12109 4 EGSQGELTPANSQSR Deamidation (N) 1560.7016 0.70159273 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7 Gps1 COP9 signalosome complex subunit 1 yes no 0 1 0 0 1 0 1 35.888 35.888 2 0.0014098 9488 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.357 59.032 0 0 5.1803 5.1563 0 0 0 0 5 5 0 0 0 0 1 1 0 0 1680.9 4531 1066 4371 10517 12112 12112 283 1 EGSQGELTPANSQSR Unmodified 1559.7176 0.71757715 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 2 0 1 34.388 34.388 3 2.7631E-05 9089 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.833 61.679 39.564 27.124 0 19.682 57.672 0 37 28 0 19 56 0 1 1 0 1 1 0 12507 4532 1066 4371 10518 12113 12113 1 EGSSIGAIDSR Unmodified 1090.5255 0.52546627 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 3 0.816 1 1 1 41.557 41.557 2;3 1.2717E-08 12760 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.25 61.72 355.81 114.13 335.59 142.13 224.94 164.82 334 120 324 139 223 157 3 2 3 2 2 2 95634 4533 3011 4372 10519;10520;10521 12114;12115;12116 12115 3 EGSSVTEAAK Unmodified 977.46655 0.46655441 3345;369 A0A286YDY4;A0A286YCY1;A0A286YCT6;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 6.25 3.96 1 1 1 1 37.273 37.273 2;3 3.127E-05 10321 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.86 66.816 88.183 68.604 267.45 240.61 146.2 194.1 83 65 259 242 148 186 2 1 4 5 2 3 23440 4534 369;3345 4373 10522;10523;10524;10525 12117;12118;12119;12120;12121 12119 5 EGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDK Unmodified 3687.8672 0.86720808 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 13 0 1 120.63 120.63 4 5.5961E-08 45370 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.276 38.531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 861.91 4535 1596 4374 10526 12122 12122 1 EGTGTETPMIGDR Unmodified 1362.6085 0.60854397 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 2.5 0.5 1 1 44.975 44.975 2 0.00068197 14299 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.499 42.887 0 0 19.685 19.594 0 57.848 0 0 19 19 0 56 0 0 1 1 0 2 4308.6 4536 1491 4375 10527;10528 12123;12124 12124 2 EGTQASEGYFSQSQEEEFAQSEEPCAK Unmodified 3052.2516 0.25161877 3267 Q9QXS6 Dbn1 Drebrin yes yes 0 0 0 0 2 0.707 1 2 1 63.022 63.022 4;5 3.6331E-08 22588 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.046 52.542 109.91 75.774 38.623 129.95 0 69.29 103 75 37 121 0 65 4 2 1 3 0 2 21922 4537 3267 4376 10529;10530;10531;10532 12125;12126;12127;12128 12128 4 EGTVEQVPCSR Unmodified 1260.5768 0.57684991 446 Q9QXG2;A2AD03 Chm Rab proteins geranylgeranyltransferase component A 1 yes no 0 0 0 0 3 0 1 37.916 37.916 2 0.026492 11085 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.49 33.759 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4538 446 4377 10533 12129 12129 1 EGVHGGGLNK Unmodified 966.48829 0.4882929 3220 Q9JJV2 Pfn2 Profilin-2 yes yes 0 0 0 0 8 3.56 1 1 1 33.56 33.56 3 1.0633E-05 8218 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.61 45.534 525.68 355.03 255.59 250.18 420.06 165.24 493 371 262 241 418 159 3 3 2 2 3 1 96525 4539 3220 4378 10534;10535;10536 12130;12131;12132 12130 3 EGVHGGGLNKK Unmodified 1094.5833 0.58325592 3220 Q9JJV2 Pfn2 Profilin-2 yes yes 0 0 0 1 9.33 2.62 1 1 1 34.299 34.299 4 0.00070576 7812 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.721 43.603 740.25 382.33 417.92 632.45 730.77 840.48 694 397 410 614 754 808 3 2 2 3 3 3 59196 4540 3220 4379 10537;10538;10539 12133;12134;12135 12133 3 EGVHGGLINK Unmodified 1022.5509 0.55089316 1758 P62962 Pfn1 Profilin-1 yes yes 0 0 0 0 6 0 1 42.165 42.165 3 0.0011806 11680 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.885 22.15 242.66 137.67 396.81 206.36 323.36 267.93 229 151 384 216 327 260 1 1 1 1 1 1 26701 4541 1758 4380 10540 12136 12136 1 EGVHGGLINKK Unmodified 1150.6459 0.64585618 1758 P62962 Pfn1 Profilin-1 yes yes 0 0 0 1 7 0 1 42.204 42.204 4 0.00013775 10926 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.855 68.004 282.37 335.9 408.21 359.14 241.6 403.52 267 340 412 355 260 385 1 1 1 1 1 1 15101 4542 1758 4381 10541 12137 12137 1 EGVHGGLINKK Deamidation (N) 1151.6299 0.62987176 1758 P62962 Pfn1 Profilin-1 yes yes 0 1 0 1 13 0 1 38.889 38.889 4 0.0048572 10873 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.542 42.516 0 489.75 554.03 480.82 515.99 627.01 0 469 559 479 535 602 0 1 1 1 1 1 18032 4543 1758 4381 10542 12138 12138 689 1 EGVIYNGLSDWLYEEEILK Deamidation (N) 2270.0994 0.099445858 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 1 0 0 8 3.56 1 1 1 98.556 98.556 3 7.9066E-07 35824 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.55 57.686 0 0 4.0543 6.1446 14.132 0 0 0 4 6 14 0 0 0 1 1 2 0 2555.1 4544 2322 4382 10543;10544;10545 12139;12140;12141 12139 912 3 EGVLYVGSK Unmodified 950.5073 0.50729701 1232;2788 O55042;Q91ZZ3 Snca;Sncb Alpha-synuclein;Beta-synuclein no no 0 0 0 0 9.17 2.54 1 1 1 1 1 1 55.884 55.884 2 0.00090464 18225 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.61 43.383 4343.9 3303.6 4701.1 4706 3956.9 4246.3 4090 3454 4742 4630 4129 4084 4 4 4 4 4 3 447300 4545 1232;2788 4383 10546;10547;10548;10549;10550;10551 12142;12143;12144;12145;12146;12147 12142 6 EGVVAAAEK Unmodified 872.46035 0.46034682 1232;2788 O55042;Q91ZZ3 Snca;Sncb Alpha-synuclein;Beta-synuclein no no 0 0 0 0 6.33 3.25 1 1 1 1 1 1 45.084 45.084 2 2.4367E-05 13940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 145.72 63.271 1794.3 1358.8 2269.8 1948.8 2049.8 2529.8 1689 1382 2259 1916 2112 2428 6 7 9 8 8 10 613830 4546 1232;2788 4384 10552;10553;10554;10555;10556;10557 12148;12149;12150;12151;12152;12153;12154;12155;12156;12157 12149 10 EGVVECSFVQSK Unmodified 1367.6391 0.63911582 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 7.12 3.52 2 2 1 1 2 57.265 57.265 2;3 3.2143E-23 19542 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 169.52 130.77 592.75 249.63 552.22 349.13 543.96 512.45 556 268 539 352 546 493 5 3 6 6 4 4 317050 4547 1327 4385 10558;10559;10560;10561;10562;10563;10564;10565 12158;12159;12160;12161;12162;12163;12164;12165 12164 8 EGVVGAVEK Unmodified 886.476 0.47599688 3356 Q9Z0F7 Sncg Gamma-synuclein yes yes 0 0 0 0 5.5 0.5 1 1 48.922 48.922 2 0.0035966 14801 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.264 33.182 0 0 0 38.842 85.034 0 0 0 0 37 83 0 0 0 0 1 1 0 3209.7 4548 3356 4386 10566;10567 12166;12167 12167 2 EGVVHGVTTVAEK Unmodified 1324.6987 0.69867961 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 0 7.75 3.11 1 1 1 1 47.136 47.136 3;4 9.2456E-09 14079 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.78 63.905 908.75 593.89 953.43 769.02 957.09 250.65 855 608 950 764 957 241 5 3 5 4 5 2 160430 4549 1232 4387 10568;10569;10570;10571 12168;12169;12170;12171;12172 12169 5 EGVVITVPAIISER Unmodified 1481.8453 0.84534384 2670 Q8R570;B2FDF6 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 6 0 1 75.85 75.85 3 0.00066126 27511 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.244 41.232 0 0 29.473 18.476 28.439 0 0 0 28 19 28 0 0 0 1 1 1 0 3227.3 4550 2670 4388 10572 12173 12173 1 EGWEYLK Unmodified 923.43888 0.43888309 2662 Q8R404 Qil1 Protein QIL1 yes yes 0 0 0 0 6 0 1 62.859 62.859 2 0.047225 21439 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.282 41.087 127.48 88.015 140.02 100.03 165.16 143.46 120 93 139 102 167 139 1 1 1 1 1 1 13519 4551 2662 4389 10573 12174 12174 1 EGWPLDIR Unmodified 984.50288 0.50288033 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6 0 1 67.373 67.373 2 0.043327 23439 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.351 13.565 215.62 236.04 349.86 135.18 305.03 287.64 204 241 343 148 307 278 2 2 2 2 2 2 33753 4552 2843 4390 10574 12175;12176 12176 2 EGYIIPLQGPSLTTTESR Unmodified 1961.0106 0.010571271 1821 P70699 Gaa Lysosomal alpha-glucosidase yes yes 0 0 0 0 6.5 0.5 1 1 72.845 72.845 3 0.014914 25240 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.834 18.582 29.952 18.196 0 60.741 24.838 48.327 28 19 0 56 28 46 1 1 0 1 1 1 3215.2 4553 1821 4391 10575;10576 12177;12178 12178 2 EGYNVYGIESVK Unmodified 1356.6561 0.65614609 1104 G5E8H1 Gria2 no no 0 0 0 0 6 0 1 62.241 62.241 2 0.0001781 21166 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.301 50.282 20.064 18.214 38.84 0 18.867 29.31 19 19 37 0 19 28 1 1 1 0 1 1 2209.3 4554 1104 4392 10577 12179 12179 1 EGYNVYGIESVKI Unmodified 1469.7402 0.74021007 1104 G5E8H1 Gria2 no no 0 0 0 1 6 0 1 72.562 72.562 3 0.023478 26040 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.318 14.678 0 38.93 26.228 38.878 0 49.036 0 37 28 37 0 46 0 1 1 1 0 1 2730 4555 1104 4393 10578 12180 12180 1 EHAALEPR Unmodified 921.46683 0.46682918 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 4.83 3.8 2 1 1 1 1 27.199 27.199 2;3 0.00060569 5668 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.98 75.625 394.42 367.31 638.18 345.66 433.87 566.78 371 361 621 345 437 540 8 5 8 8 6 6 305010 4556 2843 4394 10579;10580;10581;10582;10583;10584 12181;12182;12183;12184;12185;12186;12187;12188;12189;12190 12188 10 EHAGTYR Unmodified 832.38277 0.3827652 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 8 5 1 1 19.444 19.444 2;3 0.0048749 2898 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.33 68.857 0 8.512 0 6.4652 4.933 0 0 8 0 6 5 0 0 1 0 1 1 0 1300.6 4557 2077 4395 10585;10586 12191;12192 12192 2 EHALAQAELLK Unmodified 1221.6717 0.67173657 2575 Q8K021;Q3TSA8;D3YTP4 Scamp1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 0 6 0.816 1 1 1 53.487 53.487 3 3.6587E-09 15958 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.55 69.984 78.697 111.68 130.65 65.494 62.004 135.74 74 112 130 65 65 129 1 2 2 1 1 2 19128 4558 2575 4396 10587;10588;10589 12193;12194;12195 12195 3 EHALLAYTLGVK Unmodified 1313.7343 0.73433683 1729;1341 P10126;D3Z3I8;D3YZ68;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 11 2.08 1 1 1 3 64.924 64.924 2;3;4 7.5258E-21 23262 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.18 117.16 675.23 381.11 452.29 543.13 621.7 615.77 632 379 445 519 621 593 6 6 4 5 5 6 269240 4559 1341;1729 4397 10590;10591;10592;10593;10594;10595 12196;12197;12198;12199;12200;12201;12202;12203;12204 12203 9 EHALTSGTIK Unmodified 1055.5611 0.56112349 7 A0A087WQE6;A0A087WNT1;P83940;A0A087WPE4 Tceb1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 0 6 0 1 40.358 40.358 3 0.0057974 10904 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.174 37.397 98.991 61.108 82.356 73.725 119.54 75.473 93 65 83 74 120 74 1 1 1 1 1 1 10332 4560 7 4398 10596 12205 12205 1 EHAMLAK Unmodified 798.40581 0.40580882 2627 Q8R050;Q149F3 Gspt1;Gspt2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 0 6 0 1 37.54 37.54 3 0.028541 9503 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.559 37.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4561 2627 4399 10597 12206 12206 1 EHANIDAQSGSQAPNPSTTISPGK Unmodified 2406.1411 0.14114453 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 4.5 0.5 1 1 45.678 45.678 4 2.9401E-12 14195 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.54 57.23 99.614 0 29.37 17.403 85.794 86.03 93 0 28 19 84 83 2 0 1 1 1 2 8589.6 4562 2702 4400 10598;10599 12207;12208 12207 2 EHAPSIIFMDEIDSIGSSR Unmodified 2102.9943 0.99426928 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 4 0 1 76.387 76.387 3 0.0078266 28304 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.878 19.803 0 19.892 19.365 0 19.874 0 0 19 19 0 19 0 0 1 1 0 1 0 1692.6 4563 1713 4401 10600 12209 12209 1 EHASSLASAGLK Unmodified 1169.6041 0.60405094 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 6 0 1 42.55 42.55 3 0.029623 11843 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.516 23.042 137.34 184.14 205.74 194.39 228.51 0 130 185 209 193 227 0 1 1 1 1 1 0 4039.2 4564 2249 4402 10601 12210 12210 1 EHCEQLEK Unmodified 1071.4655 0.46550855 1866 P99028 Uqcrh Cytochrome b-c1 complex subunit 6, mitochondrial yes yes 0 0 0 0 5 3.7 1 2 1 1 1 33.488 33.488 3;4 3.2197E-07 7797 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.86 68.49 629.56 353.84 500.19 419.34 646.41 363.33 590 357 490 412 644 351 5 4 6 6 5 4 147080 4565 1866 4403 10602;10603;10604;10605;10606;10607 12211;12212;12213;12214;12215;12216;12217;12218;12219 12219 9 EHCFDGIPITK Unmodified 1315.6231 0.62307182 2393 Q8BH44;G3UW48;G3V005 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 8 3.56 1 1 1 56.119 56.119 3 0.0010448 18215 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.262 32.377 148.25 147.05 25.629 98.083 108.36 124.83 139 148 28 93 112 120 2 2 1 2 2 2 9568.2 4566 2393 4404 10608;10609;10610 12220;12221;12222 12221 3 EHEEAENNEGGK Unmodified 1341.5433 0.54330118 2727 Q91V14;A0A076FR46;A0A0J9YU26;A0A0J9YV84 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 13 0 1 24.917 24.917 3 0.00020536 4176 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.392 47.244 0 0 0 25.139 0 14.924 0 0 0 23 0 14 0 0 0 1 0 1 2220 4567 2727 4405 10611 12223 12223 1 EHEEAENNEGGK Deamidation (N) 1342.5273 0.52731676 2727 Q91V14;A0A076FR46;A0A0J9YU26;A0A0J9YV84 Slc12a5 Solute carrier family 12 member 5 yes no 0 1 0 0 13 0 1 26.375 26.375 3 0.0019186 4826 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.121 54.834 0 0 9.738 0 28.62 19.437 0 0 9 0 28 19 0 0 1 0 1 1 1427 4568 2727 4405 10612 12224 12224 978 1 EHEKEVLQK Unmodified 1138.5982 0.59823728 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 1 4.5 0.5 1 1 42.997 42.997 4 0.0003968 12258 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.7 51.422 157.26 77.89 193.83 238.27 141.6 252.87 148 83 194 231 148 241 2 1 2 2 1 2 12693 4569 1619 4406 10613;10614 12225;12226 12226 2 EHEVFQR Unmodified 943.45118 0.45117911 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 6.67 4.5 1 1 1 30.014 30.014 3 0.0054561 6434 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.029 63.826 20.292 58.216 0 111.35 7.3261 66.045 19 56 0 102 9 65 1 2 0 2 1 2 23282 4570 3279 4407 10615;10616;10617 12227;12228;12229 12229 3 EHFAQFGHVR Unmodified 1226.5945 0.59448931 3095 Q9D8T7;F7DE82 Slirp SRA stem-loop-interacting RNA-binding protein, mitochondrial yes no 0 0 0 0 7 0 1 37.544 37.544 4 0.022326 8741 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.425 32.832 0 19.462 45.101 78.652 33.768 38.478 0 19 46 75 37 37 0 1 1 1 1 1 1768 4571 3095 4408 10618 12230 12230 1 EHFSTVK Unmodified 846.42357 0.42356738 2152 Q62348 Tsn Translin yes yes 0 0 0 0 6 0 1 37.095 37.095 3 0.015672 9258 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.198 29.196 48.484 64.347 92.321 94.284 99.053 96.311 46 65 93 93 102 93 1 1 1 1 1 1 5147.9 4572 2152 4409 10619 12231 12231 1 EHGAVAVER Unmodified 966.48829 0.4882929 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 13 0 1 24.819 24.819 3 0.0010684 4139 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.499 36.686 24.564 0 19.396 23.297 36.496 33.071 23 0 19 23 37 32 1 0 1 1 1 1 5661.2 4573 3000 4410 10620 12232 12232 1 EHGNEAQAGPDAALGR Unmodified 1591.7339 0.73389591 255 A0A1B0GRV0 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 33.503 33.503 3 1.5187E-12 8778 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 124.43 112.29 50.014 37.058 38.64 19 18.538 38.913 47 37 38 19 19 37 2 1 2 1 1 1 20536 4574 255 4411 10621;10622;10623;10624 12233;12234;12235;12236 12234 4 EHGNEAQAGPDAALGR Deamidation (N) 1592.7179 0.7179115 255 A0A1B0GRV0 yes yes 0 1 0 0 1 0 1 34.835 34.835 3 3.9007E-13 8964 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.203 75.839 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4575 255 4411 10625 12237 12237 81 1 EHGQLLEK Unmodified 952.49779 0.49779495 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 5 0 1 40.136 40.136 3 0.043664 11211 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.161 16.762 48.815 55.555 44.123 46.453 63.539 67.477 46 56 46 46 65 65 1 1 1 1 1 1 3561.3 4576 2222 4412 10626 12238 12238 1 EHGYLGNLSAVASTEGTIEETLNEASR Unmodified 2847.3523 0.35225951 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 4.5 0.5 1 1 80.205 80.205 3;4 1.1537E-05 30068 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.685 30.245 20.387 0 0 0 18.538 38.913 19 0 0 0 19 37 1 0 0 0 1 1 4592.7 4577 2886 4413 10627;10628 12239;12240 12239 2 EHIEELLR Unmodified 1037.5506 0.55055881 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 5 0.816 1 1 1 50.453 50.453 3 0.0090324 16590 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.246 16.15 69.423 58.515 83.844 74.839 55.592 74.856 65 57 83 74 56 74 2 2 2 2 1 2 11572 4578 1692 4414 10629;10630;10631 12241;12242;12243;12244 12241 4 EHINLGCDVDFDIAGPSIR Unmodified 2127.0055 0.0055026685 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 5 0.816 1 1 1 69.807 69.807 3 3.1654E-10 25471 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.44 97.29 89.633 116.59 133.57 208.14 118.31 185.87 84 112 131 195 121 177 3 3 5 5 3 6 31972 4579 978;2097 4415 10632;10633;10634 12245;12246;12247;12248;12249;12250;12251;12252 12246 8 EHIYDLR Unmodified 944.47158 0.4715802 2061 Q5SUH7;Q5SUH6;Q99KN9 Clint1 Clathrin interactor 1 yes no 0 0 0 0 5 0 1 41.801 41.801 3 0.01797 11857 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.032 35.743 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 15566 4580 2061 4416 10635 12253 12253 1 EHLAQLQEK Unmodified 1094.572 0.57202253 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 6 0.816 1 1 1 41.727 41.727 3 0.00032064 11454 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.788 54.967 178.66 106.55 387.41 247.95 117.45 306.85 168 102 375 250 120 291 1 1 2 2 1 2 38531 4581 2582 4417 10636;10637;10638 12254;12255;12256 12255 3 EHLELFWSR Unmodified 1215.6037 0.60365701 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.5 1.12 1 1 1 1 62.629 62.629 3 0.0001608 20615 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.97 93.399 207.07 181.19 148.44 153.73 143.42 126 194 185 148 147 148 121 4 5 4 3 4 3 85815 4582 2185 4418 10639;10640;10641;10642 12257;12258;12259;12260;12261;12262 12259 6 EHLLGSTAEEK Unmodified 1212.5986 0.59863121 3044 Q9D1M4 Eef1e1 Eukaryotic translation elongation factor 1 epsilon-1 yes yes 0 0 0 0 4 0 1 43.725 43.725 3 0.0046214 13275 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.98 32.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4583 3044 4419 10643 12263 12263 1 EHLLLAK Unmodified 822.49634 0.49633839 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 8.5 2.69 1 1 1 1 49.08 49.08 3 0.014537 14175 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.268 36.19 354.36 247.97 285.63 109.4 232.72 437.88 333 260 278 102 232 417 4 4 3 2 2 4 57940 4584 2361 4420 10644;10645;10646;10647 12264;12265;12266;12267 12265 4 EHLSEPGTR Unmodified 1024.4938 0.49377221 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 3 0 1 27.604 27.604 3 0.0011611 6278 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.95 61.396 59.958 25.749 0 0 0 69.29 56 28 0 0 0 65 1 1 0 0 0 1 4612.9 4585 1466 4421 10648 12268 12268 1 EHMEEVR Oxidation (M) 944.40218 0.40218001 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 1 0 1 0 1 18.605 18.605 3 0.019802 2805 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.146 56.523 5.2812 5.8758 9.0976 5.8635 8.0987 0 5 6 9 6 8 0 1 1 1 1 1 0 2774.5 4586 1325 4422 10649 12269 12269 67 1 EHMEEVR Unmodified 928.40727 0.40726539 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 0 7 6 1 1 26.412 26.412 3 0.0053289 5230 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.626 45.256 129.14 23.609 96.387 48.748 27.049 78.884 121 28 93 46 28 74 3 2 3 1 1 2 34245 4587 1325 4422 10650;10651 12270;12271;12272 12271 3 EHMGEILYK Unmodified 1118.543 0.54303059 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 6.5 0.5 1 1 52.256 52.256 3 0.0011133 16538 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.749 56.811 304.59 158.17 431.28 199.46 337.01 397.6 287 167 417 204 344 382 3 2 3 2 3 3 46626 4588 1596 4423 10652;10653 12273;12274;12275 12274 3 EHMMDGVTTR Unmodified 1175.5063 0.50632751 2030;1425 P20444;Q4VA93;Q3TQ39 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 4 0 1 37.369 37.369 3 0.052527 10332 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.783 26.206 0 20.216 0 40.102 18.032 0 0 19 0 37 19 0 0 1 0 1 1 0 1367.7 4589 1425;2030 4424 10654 12276 12276 1 EHMQPTHPIR Unmodified 1244.6084 0.60842481 1797;1706 P68510;P61982 Ywhah;Ywhag 14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 0 0 0 6.86 3.98 1 2 1 1 2 27.016 27.016 3;4 6.8786E-06 4551 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.54 90.211 207.13 318.53 305.45 156.15 235.85 386.4 195 316 306 149 232 371 4 7 7 4 3 6 70995 4590 1797;1706 4425 10655;10656;10657;10658;10659;10660;10661 12277;12278;12279;12280;12281;12282;12283;12284;12285;12286 12283 10 EHMQPTHPIR Oxidation (M) 1260.6033 0.60333943 1797;1706 P68510;P61982 Ywhah;Ywhag 14-3-3 protein eta;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 0 1 0 7.33 4.03 1 1 1 23.086 23.086 4 0.0086487 3512 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.888 31.845 89.702 27.124 49.289 119.13 56.315 69.29 84 28 47 111 56 65 3 1 2 3 1 2 9644.3 4591 1797;1706 4425 10662;10663;10664 12287;12288;12289;12290 12287 127 4 EHNPTQYEER Unmodified 1301.5636 0.56364269 21 A0A087WPY0;A0A087WS54;Q8R0F6 Ilkap Integrin-linked kinase-associated serine/threonine phosphatase 2C yes no 0 0 0 0 1.5 0.5 1 1 27.15 27.15 3 0.0077831 5857 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.486 38.596 50.251 0 30.194 30.104 26.577 38.684 47 0 28 28 28 37 2 0 1 1 1 1 4250.7 4592 21 4426 10665;10666 12291;12292 12292 2 EHPDAEVQK Unmodified 1051.4934 0.49343786 149 D3Z0R1;D3Z217;D6RIK3;D3YWK6;D3Z380;A0A0R4J018;O55060 Tpmt Thiopurine S-methyltransferase yes no 0 0 0 0 2.5 0.5 1 1 33.624 33.624 3 0.0067088 8822 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.717 35.794 20.387 0 0 20.246 27.69 19.464 19 0 0 19 28 19 1 0 0 1 1 1 1361.6 4593 149 4427 10667;10668 12293;12294 12294 2 EHPYDAAK Unmodified 929.4243 0.42429566 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 0 4.5 0.5 1 1 32.864 32.864 3 0.0035166 8152 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.474 51.993 177.66 0 76.769 64.022 246.23 84.765 166 0 74 65 241 83 2 0 1 1 2 1 47292 4594 3042 4428 10669;10670 12295;12296 12295 2 EHQISPGDFPNLK Unmodified 1480.731 0.73104237 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 0 5 0 1 57.019 57.019 4 0.0025142 19296 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.071 29.193 39.516 36.703 0 40.441 0 39.442 37 37 0 37 0 37 1 1 0 1 0 1 2111.4 4595 3271 4429 10671 12297 12297 1 EHQISSGDFPSLR Unmodified 1471.7056 0.7055559 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 0 0 0 0 5 0 1 49.337 49.337 3 0.0020873 15667 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.95 38.418 30.044 0 0 30.604 0 49.036 28 0 0 28 0 46 1 0 0 1 0 1 3466.2 4596 3353 4430 10672 12298 12298 1 EHQQLGK Unmodified 838.42972 0.42971539 2665 Q8R4N0 Clybl Citrate lyase subunit beta-like protein, mitochondrial yes yes 0 0 0 0 5 0 1 29.651 29.651 3 0.015972 6281 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.915 9.9338 78.882 103.21 0 71.045 0 0 74 102 0 65 0 0 1 1 0 1 0 0 5503.5 4597 2665 4431 10673 12299 12299 1 EHSNPNYDK Unmodified 1102.468 0.46795139 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 28.646 28.646 3 0.00069403 6367 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.108 56.883 29.904 115.62 195.51 259.79 95.899 118.67 28 112 195 250 102 112 1 3 3 4 2 2 17174 4598 3204 4432 10674;10675;10676;10677 12300;12301;12302;12303 12301 4 EHTAYLIK Unmodified 973.52328 0.52328142 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 8.67 3.09 1 1 1 44.759 44.759 3 0.00082412 13140 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.27 68.396 1121.2 990.63 1020.5 611.51 1244.7 1374.8 1055 1015 1021 598 1262 1323 4 4 3 4 5 5 149280 4599 2998 4433 10678;10679;10680 12304;12305;12306;12307;12308 12304 5 EHTEFTDHELQEWYK Unmodified 1990.8697 0.86972069 1734 P62748;A0A1Y7VMK3 Hpcal1 Hippocalcin-like protein 1 yes no 0 0 0 0 5 0 1 58.594 58.594 4 3.4707E-05 20105 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.68 52.979 0 48.16 46.882 0 56.948 47.411 0 46 46 0 56 46 0 1 1 0 1 1 2414.1 4600 1734 4434 10681 12309 12309 1 EHTLAWK Unmodified 883.4552 0.45520186 2183 Q64737;A0A338P6X4;D6RCG1;A0A338P676 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 7 0 1 45.814 45.814 3 0.016429 12502 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.485 36.014 39.701 0 0 29.762 44.743 58.419 37 0 0 28 46 56 1 0 0 1 1 1 3877.9 4601 2183 4435 10682 12310 12310 1 EHTPVEEPLR Unmodified 1205.6041 0.60405094 47 A2AHC3;A0A0A0MQE5 Camsap1 Calmodulin-regulated spectrin-associated protein 1 yes no 0 0 0 0 2 0 1 36.356 36.356 3 0.00079384 10120 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.424 54.095 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4602 47 4436 10683 12311 12311 1 EHVVAASK Unmodified 839.45012 0.45011648 2639 Q8R1B4 Eif3c Eukaryotic translation initiation factor 3 subunit C yes yes 0 0 0 0 8 3.56 1 1 1 31.988 31.988 3 0.0083348 7630 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.692 31.884 49.176 154.16 0 150.7 65.02 47.181 46 148 0 139 65 46 1 2 0 2 1 1 4573 4603 2639 4437 10684;10685;10686 12312;12313;12314 12312 3 EHYPNGVCTVYGK Deamidation (N) 1523.6715 0.67147858 1564 P47754;D6RCW7 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 1 0 0 5.33 0.471 2 1 48.58 48.58 3;4 0.00025944 15307 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.619 67.902 284.88 251.7 279.16 180.3 365.24 179.89 268 259 278 185 363 176 2 3 2 2 3 2 20810 4604 1564 4438 10687;10688;10689 12315;12316;12317 12316 595 3 EIAALHEICNHESVIK Unmodified 1861.9356 0.93563219 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6 0 1 56.533 56.533 4 1.6052E-05 18487 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.529 52.828 0 68.053 66.247 0 75.428 57.544 0 65 65 0 74 56 0 1 1 0 1 1 4691.2 4605 570 4439 10690 12318 12318 1 EIAASTAQLVAASK Unmodified 1358.7405 0.74054442 2694 Q8VD75;A0A0J9YUA3 Hip1 Huntingtin-interacting protein 1 yes no 0 0 0 0 8 0 1 64.445 64.445 3 0.027865 20679 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.337 10.01 0 48.323 37.135 0 0 0 0 46 37 0 0 0 0 1 1 0 0 0 1749.6 4606 2694 4440 10691 12319 12319 1 EIADGLCLEVEGK Unmodified 1431.6915 0.69154532 1764 P63028 Tpt1 Translationally-controlled tumor protein yes yes 0 0 0 0 8.75 4.26 1 1 2 70.638 70.638 2;3 3.3275E-11 25748 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.71 87.385 59.398 73.839 112.33 101.68 120.69 47.217 56 74 112 102 121 46 1 1 2 3 2 1 22573 4607 1764 4441 10692;10693;10694;10695 12320;12321;12322;12323;12324 12322 5 EIADLGEALATAVIPQWQK Unmodified 2052.0892 0.089155943 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9.2 2.04 1 1 2 1 100.97 100.97 3;4 7.1004E-08 36705 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.14 73.195 54.349 106.47 54.251 103.7 67.914 74.303 51 104 53 99 69 71 3 4 2 5 3 3 13799 4608 2382 4442 10696;10697;10698;10699;10700 12325;12326;12327;12328;12329;12330 12325 6 EIAEAYLGGK Unmodified 1049.5393 0.53932542 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 6 0 1 61.802 61.802 3 0.0022613 20923 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.297 32.925 39.105 25.846 78.32 0 56.948 47.411 37 28 74 0 56 46 1 1 1 0 1 1 3568.6 4609 1397 4443 10701 12331 12331 1 EIAEAYLGHPVTNAVITVPAYFNDSQR Unmodified 2974.4825 0.48248583 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 7 0 1 78.609 78.609 4 0.063262 27949 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 22.122 8.6673 30.044 0 0 0 46.807 38.106 28 0 0 0 46 37 1 0 0 0 1 1 2776.8 4610 1407 4444 10702 12332 12332 1 EIAEAYLGK Unmodified 992.51786 0.51786169 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.5 3.25 1 1 2 2 61.667 61.667 2;3 4.2505E-08 20071 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.72 101.52 472.44 831.71 724.25 508.82 1156.2 1072.4 444 823 722 503 1160 1037 5 8 6 4 7 8 262930 4611 1762 4445 10703;10704;10705;10706;10707;10708 12333;12334;12335;12336;12337;12338;12339;12340 12338 8 EIAENALGK Unmodified 943.49746 0.4974606 709 D3YWT1;D3Z3N4 Hnrnph3 yes no 0 0 0 0 5.5 0.5 1 1 53.08 53.08 2 0.00179 17439 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.965 41.05 0 118.21 57.074 39.196 151.41 46.604 0 112 56 37 148 46 0 2 1 1 2 1 7346.2 4612 709 4446 10709;10710 12341;12342 12341 2 EIAENITK Unmodified 916.48656 0.48656157 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5.5 0.5 1 1 50.318 50.318 2 0.046264 15481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.157 15.739 48.761 0 150.15 0 150.2 134.29 46 0 139 0 148 130 1 0 2 0 2 2 4998.5 4613 3025 4447 10711;10712 12343;12344 12344 2 EIAQDFK Unmodified 849.42323 0.42323303 1300 P84244;P02301;E0CZ27;F8WI35;A0A1W2P768;P84228;P68433 H3f3a;H3f3c;Hist1h3b;Hist1h3a Histone H3.3;Histone H3.3C;Histone H3;Histone H3.2;Histone H3.1 yes no 0 0 0 0 7 3.54 1 1 1 1 53.044 53.044 2;3 0.0050615 16810 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.19 50.83 1096.2 912.41 1272.7 1172.5 689.45 1145.5 1033 947 1279 1154 726 1093 3 3 3 4 2 4 127620 4614 1300 4448 10713;10714;10715;10716 12345;12346;12347;12348 12347 4 EIAQQLGMK Unmodified 1016.5325 0.5324659 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 58.002 58.002 3 0.0031318 17585 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.657 45.337 49.121 0 119.85 46 84.191 164.96 46 0 111 46 83 157 1 0 2 1 1 2 24790 4615 2859 4449 10717;10718;10719 12349;12350;12351 12350 3 EIASVVK Unmodified 744.43815 0.43815481 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 51.395 51.395 3 0.0052802 16048 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.942 7.3078 236.7 158.69 118.22 220.5 279.84 297.96 222 166 120 213 287 287 2 2 1 2 2 2 19281 4616 1312 4450 10720;10721 12352;12353 12352 2 EIAVGDSEGQIVIYDVGEQIAVPR Unmodified 2556.3071 0.30714722 539 Q3TPJ8;A2BFF9;O88487 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 4 0 1 85.486 85.486 3 3.1521E-10 32495 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.534 49.412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4617 539 4451 10722 12354 12354 1 EIAVLCHK Unmodified 968.51134 0.51133653 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 7 0 1 48.906 48.906 3 0.0022441 13965 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.429 48.268 211.33 273.03 318.25 309.65 310.68 468.7 200 275 323 306 326 448 1 1 1 1 1 1 32651 4618 90 4452 10723 12355 12355 1 EIAVTVK Unmodified 758.4538 0.45380487 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 7 0 1 52.73 52.73 2 0.027191 15840 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.9 22.517 99.019 0 129.34 0 83.165 106.36 93 0 120 0 83 102 1 0 1 0 1 1 5996 4619 1822 4453 10724 12356 12356 1 EICCYSISCK Unmodified 1318.5356 0.53557872 980 F6QKK2;Q8VEH3;A0A0N4SVB8;Q9CQW2 Arl8a;Arl8b ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B yes no 0 0 0 0 6 0 1 55 55 2 0.013376 17768 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.593 46.333 0 19.414 47.966 38.675 0 0 0 19 47 38 0 0 0 1 1 1 0 0 1769.9 4620 980 4454 10725 12357 12357 1 EIDDTYIEDAADVDAR Unmodified 1809.7905 0.79046732 318 A0A1W2P855;A0A1W2P7Z8;A0A1W2P7S8;A0A1W2P7H4;A0A1W2P6Q8;Q6A068 Cdc5l Cell division cycle 5-like protein yes no 0 0 0 0 2 0 1 67.015 67.015 3 0.00084107 24110 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 52.026 34.745 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 1213.8 4621 318 4455 10726 12358 12358 1 EIDGGLETLR Unmodified 1101.5666 0.5666028 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0U1RNK9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 4 0.816 1 1 1 56.531 56.531 2 6.3391E-09 19744 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 153.24 82.977 59.671 67.789 200.24 161.8 155.77 134.14 56 65 194 157 157 130 2 1 3 3 2 2 38581 4622 3155 4456 10727;10728;10729 12359;12360;12361;12362 12359 4 EIDNLAGPVVLSTPAQLIAPVVVAK Unmodified 2513.4469 0.44687559 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 8 0 1 96.222 96.222 4 0.0016427 34682 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.744 26.778 14.774 23.106 22.121 29.286 0 24.518 14 23 23 28 0 23 1 1 1 1 0 1 1607.7 4623 3165 4457 10730 12363 12363 1 EIDPGTQLYTVTSSLEYK Unmodified 2043.0048 0.0048171915 897 E9Q4G8;E9Q3Q6;Q61490;F6QH25 Alcam CD166 antigen yes no 0 0 0 0 5 0 1 81.548 81.548 3 9.7398E-05 30962 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.424 37.664 20.387 0 0 50.278 0 20.254 19 0 0 46 0 19 1 0 0 1 0 1 3787.3 4624 897 4458 10731 12364 12364 1 EIDPQNDLTFLR Unmodified 1459.7307 0.73070802 1728 P62627;A2AVR9 Dynlrb1 Dynein light chain roadblock-type 1 yes no 0 0 0 0 8 3.56 1 1 1 72.27 72.27 2 9.4857E-18 26445 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.95 85.778 127.97 64.479 77.306 175.4 134.04 96.115 120 65 74 167 139 92 3 2 1 3 3 2 33607 4625 1728 4459 10732;10733;10734 12365;12366;12367 12365 3 EIDQEAAVEVSQLR Unmodified 1585.7948 0.79476484 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 4.5 3.86 2 2 1 1 62.75 62.75 2;3 1.2851E-40 22494 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 182.55 124.95 198.43 109.95 131.63 95.138 56.581 87.929 186 112 130 93 56 84 5 4 4 4 1 3 125020 4626 2958 4460 10735;10736;10737;10738;10739;10740 12368;12369;12370;12371;12372;12373;12374;12375 12373 8 EIDQEAAVEVSQLRDPQHDLDR Unmodified 2562.231 0.23102217 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 1 4.33 3.99 1 1 2 1 1 60.206 60.206 3;4 2.9907E-18 21543 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.35 74.87 178.17 100.35 279.48 111.83 155.09 111.54 169 103 273 114 155 108 6 3 5 3 3 3 129980 4627 2958 4461 10741;10742;10743;10744;10745;10746 12376;12377;12378;12379;12380;12381;12382 12379 7 EIDTLNER Unmodified 988.48254 0.48253882 2519 Q8CBE3;H3BJR7;H3BJS1;H3BK66;Q05BF4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 2 0 1 43.202 43.202 2 0.0030214 13221 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 125.31 76.256 48.833 44.812 50.202 45.907 73.317 57.604 46 46 51 46 74 56 1 1 1 1 1 1 7144 4628 2519 4462 10747 12383 12383 1 EIDVLEFGESAPAASK Unmodified 1661.8148 0.81483158 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 0 0 0 0 7.67 3.86 1 1 1 74.424 74.424 2;3 0.0001017 27455 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.463 74.989 88.494 121.71 0 0 189.9 105.25 83 120 0 0 185 102 2 3 0 0 3 1 28167 4629 3360 4463 10748;10749;10750 12384;12385;12386 12384 3 EIDWVLLEQK Unmodified 1271.6762 0.67615325 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 6.5 0.5 1 1 80.715 80.715 2;3 0.0018017 28952 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.726 28.578 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 3447.5 4630 1388 4464 10751;10752 12387;12388 12388 2 EIEAEIQALR Unmodified 1170.6245 0.62445203 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 6.25 3.96 1 1 1 1 64.663 64.663 2;3 1.5043E-06 22983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.01 59.367 167.24 148.66 151.02 104.86 167.56 192.43 157 149 149 102 168 185 3 3 4 3 3 4 51484 4631 154 4465 10753;10754;10755;10756 12389;12390;12391;12392;12393 12391 5 EIEDAAQFATADPEPPLEELGYHIYSSDPPFEVR Unmodified 3831.7792 0.77918094 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 3.67 0.471 1 2 90.247 90.247 4;5 8.1805E-11 33782 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.527 52.052 15.976 12.598 9.3548 7 9.414 6.396 15 13 9 7 9 6 2 2 1 1 1 1 6857.5 4632 1520 4466 10757;10758;10759 12394;12395;12396 12395 3 EIEDAEK Unmodified 832.38143 0.38142779 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 2.33 0.471 2 1 41.57 41.57 2;3 0.0061477 12587 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.212 27.931 859.17 434.56 801.37 759.22 737.1 845.72 807 460 800 751 759 808 2 1 3 3 2 2 109440 4633 2298 4467 10760;10761;10762 12397;12398;12399 12398 3 EIEDLSQSQSPESETDYPVSTDTR Unmodified 2712.1886 0.18860781 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 1.5 0.5 1 1 60.246 60.246 3 9.2444E-16 19687 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.877 81.428 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 7111.5 4634 3165 4468 10763;10764 12400;12401 12400 2 EIEELQSQAQALSQEGK Unmodified 1886.9222 0.92215019 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.75 4.26 1 1 2 69.231 69.231 3;4 4.869E-07 25052 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.347 54.026 149 191.87 215.8 218.12 405.94 314.61 139 185 213 213 408 306 2 3 2 2 4 4 42353 4635 2148 4469 10765;10766;10767;10768 12402;12403;12404;12405 12402 4 EIEIAEQDMSALISLR Unmodified 1816.9241 0.92406445 2298 Q80SW1;D3Z2Q0;F7ATQ6 Ahcyl1 Putative adenosylhomocysteinase 2 yes no 0 0 0 0 7 3.54 1 1 1 1 91.262 91.262 3 0.00013033 33930 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.416 48.584 69.625 0 20.125 29.067 26.928 29.336 65 0 19 28 28 28 2 0 1 2 2 1 8391.5 4636 2298 4470 10769;10770;10771;10772 12406;12407;12408;12409;12410 12406 5 EIEIAEQEMPALMALR Unmodified 1842.922 0.92195596 1040 F8WGT1;Q68FL4;F8WI65;H3BL31;D3YYM7;D3YX97 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 0 0 0 0 5 0 1 85.848 85.848 3 0.0039949 32773 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.297 24.239 0 0 29.937 8.0527 0 29.848 0 0 28 9 0 28 0 0 1 1 0 1 1766.6 4637 1040 4471 10773 12411 12411 1 EIEIDIEPTDK Unmodified 1300.6398 0.63982732 1488 P29595;A0A2I3BRG0 Nedd8 NEDD8 yes no 0 0 0 0 3.5 0.5 1 1 67.599 67.599 3 0.00053276 24280 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.64 46.813 26.524 27.548 27.244 47.416 30.015 32.19 25 28 28 47 31 31 1 1 1 2 1 1 8467.8 4638 1488 4472 10774;10775 12412;12413 12413 2 EIEIDIEPTDKVER Unmodified 1684.8519 0.85194536 1488 P29595 Nedd8 NEDD8 yes yes 0 0 0 1 3 0 1 62.55 62.55 3 0.00020718 22333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.659 68.873 39.077 35.483 74.804 65.947 34.022 48.065 37 37 74 65 37 46 1 1 1 1 1 1 14717 4639 1488 4473 10776 12414 12414 1 EIEIDYTGTEPSSPCNK Unmodified 1938.8517 0.85168737 2713 Q8VEK0 Tmem30a Cell cycle control protein 50A yes yes 0 0 0 0 3.5 0.5 1 1 61.001 61.001 3 5.4305E-06 21399 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.493 60.335 0 0 20.558 0 0 29.848 0 0 19 0 0 28 0 0 1 0 0 1 4085.6 4640 2713 4474 10777;10778 12415;12416 12416 2 EIEIIPLQR Unmodified 1109.6445 0.64445919 2819 Q924B0;O55023 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 9.5 3.5 1 1 67.72 67.72 2;3 0.0015041 23739 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.334 46.014 157.4 0 236.31 166.81 261.16 28 148 0 226 170 257 28 1 0 1 1 1 1 16204 4641 2819 4475 10779;10780 12417;12418 12417 2 EIEIIPLQRDDES Unmodified 1555.773 0.77296676 2819 Q924B0;O55023 Impa1 Inositol monophosphatase 1 yes no 0 0 0 1 4 0 1 69.797 69.797 2 0.0093502 25228 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.201 13.701 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1919.4 4642 2819 4476 10781 12419 12419 1 EIELLCQEHGQENDDLVQR Unmodified 2324.0703 0.07028777 722 D3YYK8;E9Q6X0;Q8R001 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 3 0.816 1 1 1 58.822 58.822 3;4 4.1144E-10 20393 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.75 92.632 20.147 47.585 9 20.234 28.359 29.848 19 46 9 19 28 28 1 1 1 1 1 1 14662 4643 722 4477 10782;10783;10784 12420;12421;12422 12422 3 EIENYPHFFLDFENAQPTEGER Unmodified 2681.2034 0.20341043 2410 Q8BHZ0 Fam49a Protein FAM49A yes yes 0 0 0 0 5 0 2 77.944 77.944 3;4 3.0155E-07 29133 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.765 53.232 29.387 0 0 30.604 0 0 28 0 0 28 0 0 2 0 0 1 0 0 4714.4 4644 2410 4478 10785;10786 12423;12424 12423 2 EIENYPTCYK Unmodified 1315.5755 0.57545293 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7 3.54 1 1 1 1 53.558 53.558 2;3 3.6549E-05 17713 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.789 62.663 89.069 111.76 131.52 78.102 158.74 85.517 84 112 129 75 158 83 2 2 2 2 3 1 19210 4645 775 4479 10787;10788;10789;10790 12425;12426;12427;12428 12428 4 EIESSPQYR Unmodified 1107.5197 0.51965261 228 E9Q5Q0;Q3TGG2;A0A0U1RPL0;Q7TQH0 Atxn2l Ataxin-2-like protein yes no 0 0 0 0 3 0 1 38.238 38.238 2 0.0056749 11238 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.75 52.584 0 29.152 38.285 0 58.576 0 0 28 37 0 56 0 0 1 1 0 1 0 3894.6 4646 228 4480 10791 12429 12429 1 EIETYHNLLEGGQEDFESSGAGK Unmodified 2509.1245 0.12449141 661 CON__P35527 yes yes 0 0 0 0 3.67 0.471 1 2 66.401 66.401 3;4 1.8491E-72 23756 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.67 118.65 40.413 26.428 38.245 0 38.702 0 38 28 37 0 37 0 1 1 1 0 1 0 11467 + 4647 661 4481 10792;10793;10794 12430;12431;12432 12432 3 EIEVDSSPSVLEILDTAGTEQFASMR Unmodified 2823.3484 0.34841969 1695;2346;2460 Q80ZJ1;P61226;Q8BU31 Rap2a;Rap2b;Rap2c Ras-related protein Rap-2a;Ras-related protein Rap-2b;Ras-related protein Rap-2c no no 0 0 0 0 4 0 1 96.393 96.393 3 1.449E-17 34442 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.426 64.777 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4648 2346;1695;2460 4482 10795 12433 12433 1 EIEVGGGR Unmodified 815.41373 0.41373097 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 3 0 1 38.36 38.36 2 0.0038799 11314 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.92 49.626 117.97 129 81.471 0 141.47 114.29 111 130 83 0 139 111 1 1 1 0 1 1 11102 4649 996 4483 10796 12434 12434 1 EIEVPDQYGTIR Unmodified 1418.7042 0.70415892 173 A0A0R4J0H0;A0A0R4J1G7;F8WJ93;Q3UMY5 Eml4 Echinoderm microtubule-associated protein-like 4 yes no 0 0 0 0 4 0 1 60.107 60.107 2 0.0055543 21074 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.255 22.533 0 20.216 0 0 9.414 0 0 19 0 0 9 0 0 1 0 0 1 0 1470.7 4650 173 4484 10797 12435 12435 1 EIEVTATQSIPSLLLEETPR Unmodified 2225.1791 0.17909316 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 7.33 4.03 1 1 1 86.271 86.271 3 1.2755E-10 32909 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.668 71.13 19.158 19.571 19.428 0 29.288 20.254 18 19 18 0 28 19 2 1 2 0 1 1 6160 4651 860 4485 10798;10799;10800 12436;12437;12438;12439 12437 4 EIFGLYGQTTGK Unmodified 1312.6663 0.66631685 2837 Q99JZ4 Sar1a yes yes 0 0 0 0 8.5 0.5 1 1 68.712 68.712 3 0.00061635 22046 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.121 53.528 127.92 52.013 172.8 137.58 77.404 69.29 120 56 167 130 74 65 2 1 2 2 1 1 14198 4652 2837 4486 10801;10802 12440;12441;12442 12442 3 EIFLSQPILLELEAPLK Unmodified 1952.1234 0.12341618 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 9 2.5 1 2 1 2 2 101.34 101.34 3;4 1.9734E-08 36737 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.34 92.702 125.74 116.54 127.59 193.92 120.57 93.283 118 113 130 185 120 88 5 4 6 7 4 6 54009 4653 1710;1711;1770 4487 10803;10804;10805;10806;10807;10808;10809;10810 12443;12444;12445;12446;12447;12448;12449;12450;12451;12452;12453 12444 11 EIFVDFAPFLSR Unmodified 1439.7449 0.74490152 3165 Q9EPN1;A0A0A6YXX3;A0A0A6YXL6;E9Q3Y4;Q9ESE1;A0A1D5RM41 Nbea;Lrba Neurobeachin;Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 0 9 0 1 94.286 94.286 3 0.0049047 33683 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.071 26.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4654 3165 4488 10811 12454 12454 1 EIGGDVQK Unmodified 844.42905 0.42904669 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 0 0 0 0 5 0.816 1 1 1 43.772 43.772 2;3 0.031832 13260 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.097 6.9878 362.72 341.91 424.36 343.76 194.48 445.37 342 351 427 341 212 423 2 2 2 2 1 1 36714 4655 1536 4489 10812;10813;10814 12455;12456;12457 12455 3 EIGGVTESQK Unmodified 1046.5244 0.52440364 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 5 0 1 44.505 44.505 2 0.00018845 13304 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.048 69.88 29.702 36.927 26.22 38.392 25.866 48.298 28 37 28 37 28 46 1 1 1 1 1 1 2942.3 4656 3285 4490 10815 12458 12458 1 EIGILTTNK Unmodified 987.56006 0.56006086 634;18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WR90;A0A087WNT3;B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi2;Abi1 Abl interactor 2;Abl interactor 1 no no 0 0 0 0 7.5 0.5 1 1 60.144 60.144 2 0.00051673 18694 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.86 24.863 266.35 252.86 284.6 211.5 231.06 329.2 251 259 287 213 241 315 2 2 2 2 2 2 22863 4657 18;634 4491 10816;10817 12459;12460 12460 2 EIGISNPLHR Unmodified 1134.6146 0.61455605 1669;639 P60469;A0A1B0GRM4;S4R1D4;F7CYX4;B8QI34;Q8BSS9;B2RXW8;B2RXQ2 Ppfia3;Ppfia1;Ppfia2 Liprin-alpha-3;Liprin-alpha-2 no no 0 0 0 0 6.5 0.5 1 1 49.899 49.899 3 0.00037786 15153 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.134 47.931 78.507 92.452 72.145 125.69 62.085 87.772 74 93 74 120 65 84 2 2 1 2 1 2 34860 4658 1669;639 4492 10818;10819 12461;12462 12461 2 EIGPAEEWVVK Unmodified 1255.6449 0.64485312 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 5 0 2 69.472 69.472 2;3 0.0048395 25117 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.776 31.171 49.964 36.905 47.19 26.89 47.927 0 47 37 47 28 47 0 2 1 2 2 2 0 4518.3 4659 3192 4493 10820;10821 12463;12464 12463 2 EIGPAEEWVVKDQEPK Unmodified 1852.9207 0.92069363 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 1 5 0 1 64.318 64.318 4 0.00044861 22646 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.037 46.915 0 47.816 67.461 0 56.581 58.081 0 46 65 0 56 56 0 1 1 0 1 1 3665.2 4660 3192 4494 10822 12465 12465 1 EIGPNDGFLAQLCQLNDR Unmodified 2058.9793 0.97928792 571 B1AQF4;Q9D7X3;Q3V2Y9;H3BKD1 Dusp3 Dual specificity protein phosphatase 3 yes no 0 0 0 0 5 0 1 80.77 80.77 3 0.011327 30551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.85 21.875 20.244 28.427 0 0 19.874 0 19 28 0 0 19 0 1 1 0 0 1 0 3605.1 4661 571 4495 10823 12466 12466 1 EIGQSVDEVEK Unmodified 1231.5932 0.59321148 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 51.689 51.689 2 1.7241E-33 17500 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 194.48 100.88 285.98 185.42 289.9 352.2 288.13 154.51 269 194 288 343 296 148 4 3 3 4 4 2 63126 4662 2148 4496 10824;10825;10826;10827 12467;12468;12469;12470 12468 4 EIGSPPLDPTEHFLPEEEKLTEQER Unmodified 2919.4138 0.41379714 1113 H3BIY2;Q6ZPU9;E0CXN7 2510003E04Rik;Kbp KIF1-binding protein yes no 0 0 0 1 3 0 1 69.487 69.487 4 0.0014502 25621 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.087 23.144 9.4712 29.043 6.6172 29.867 18.19 9.0749 9 28 9 28 19 9 1 1 1 1 1 1 2670.3 4663 1113 4497 10828 12471 12471 1 EIGWADVGGWTGQGGSILGTK Unmodified 2088.0276 0.027618319 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 9.67 2.36 2 1 84.694 84.694 3;4 2.0679E-17 33078 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.71 96.596 78.622 81.981 99.54 142.67 82.715 136.22 74 83 102 139 83 130 1 1 2 3 1 2 38218 4664 2507 4498 10829;10830;10831 12472;12473;12474 12474 3 EIHLWFKPEELIDYK Unmodified 1959.0142 0.014200086 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 1 9.33 2.62 1 1 1 81.471 81.471 4 5.1808E-06 30474 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.14 89.061 493.5 472.94 333.18 527.65 527.73 299.15 464 481 333 510 528 287 6 6 3 6 4 3 21485 4665 866 4499 10832;10833;10834 12475;12476;12477;12478;12479;12480 12479 6 EIHQDWANR Unmodified 1167.5421 0.54211939 2746 Q91VR8 Brk1 Protein BRICK1 yes yes 0 0 0 0 5.5 0.5 1 1 37.212 37.212 3 0.00067062 9326 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.64 74.751 97.697 79.995 103.42 37.103 0 78.884 92 83 102 37 0 74 2 2 2 1 0 1 13730 4666 2746 4500 10835;10836 12481;12482 12482 2 EIIAVSCGPSQCQETIR Unmodified 1946.919 0.91899585 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 8 3.56 1 1 1 56.468 56.468 3 8.7384E-07 18417 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.44 74.705 0 79.498 18.062 29.204 46.483 38.951 0 75 19 28 47 37 0 2 1 1 2 1 7560 4667 3155 4501 10837;10838;10839 12483;12484;12485 12484 3 EIIDLVLDR Unmodified 1084.6128 0.61282471 1313;1794 P05213;A0A2R8VHF3;P68369 Tuba1b;Tuba1a Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 0 7.17 2.91 1 1 1 1 1 1 83.654 83.654 2 2.8866E-12 30481 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 175.51 110.68 3389.7 3002 3560.4 3202 4195.5 3499.7 3188 3083 3603 3187 4262 3393 9 9 10 9 10 10 1843700 4668 1313;1794 4502 10840;10841;10842;10843;10844;10845 12486;12487;12488;12489;12490;12491;12492;12493;12494;12495;12496;12497 12494 12 EIIDPVLDR Unmodified 1068.5815 0.58152458 44 A0A0A0MQA5;P68368;A0A087WQS4 Tuba4a Tubulin alpha-4A chain yes no 0 0 0 0 5.43 3.25 2 2 1 1 1 62.907 62.907 2;3 6.1925E-06 22256 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 155.42 98.137 1178.3 960.28 854.9 837.09 1093.4 1200 1107 978 859 823 1118 1155 8 9 6 6 7 9 1567100 4669 44 4503 10846;10847;10848;10849;10850;10851;10852 12498;12499;12500;12501;12502;12503;12504;12505;12506;12507;12508 12507 11 EIIEQGIDLFNK Unmodified 1417.7453 0.74529545 1085 G3X9K3;D3YYK9 Arfgef1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 0 0 0 0 6 0 1 82.395 82.395 3 0.015366 30575 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.991 22.74 39.701 0 0 0 29.288 0 37 0 0 0 28 0 1 0 0 0 1 0 1501.6 4670 1085 4504 10853 12509 12509 1 EIIVLHNPK Unmodified 1061.6233 0.62332982 261 A0A1B0GSA5;Q80Y98;A0A1B0GS27 Ddhd2 Phospholipase DDHD2 yes no 0 0 0 0 7 0 1 52.069 52.069 3 0.042504 15483 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.876 13.667 69.134 33.463 74.365 75.122 70.618 97.123 65 37 74 74 74 93 1 1 1 1 1 1 2946.3 4671 261 4505 10854 12510 12510 1 EILEESLR Unmodified 987.52368 0.52367535 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 4 0 1 56.943 56.943 2 0.0097938 19545 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.305 4.4987 48.961 25.739 44.99 67.143 64.906 0 46 28 46 65 65 0 1 1 1 1 1 0 7368.3 4672 3327 4506 10855 12511 12511 1 EILGTAQSVGCNVDGR Unmodified 1674.7995 0.79953264 1527 P35979 Rpl12 60S ribosomal protein L12 yes yes 0 0 0 0 6 0 1 55.794 55.794 3 0.05868 18123 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.712 17.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4673 1527 4507 10856 12512 12512 1 EILHAIGK Unmodified 879.5178 0.51780212 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 0 9 0 1 54.211 54.211 3 0.0058323 15067 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.485 13.279 158.01 0 133.45 143.97 0 0 148 0 130 139 0 0 1 0 1 1 0 0 7061.2 4674 2467 4508 10857 12513 12513 1 EILIPVFK Unmodified 957.5899 0.58990443 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 10 2.16 1 1 1 80.779 80.779 2;3 0.012459 31118 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.298 24.261 20.091 165.18 225.17 112.79 173.3 232.77 19 158 222 111 176 223 1 2 3 1 2 3 18638 4675 2020 4509 10858;10859;10860 12514;12515;12516 12516 3 EILQEEEDLAEIVQLVGK Unmodified 2054.0783 0.078316486 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 7 3.54 2 2 2 2 103.79 103.79 3;4 5.5364E-54 36201 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 169.61 144.71 112.75 208.31 162.86 98.914 140.63 110.87 106 207 162 97 142 107 6 10 7 7 9 6 83586 4676 1596 4510 10861;10862;10863;10864;10865;10866;10867;10868 12517;12518;12519;12520;12521;12522;12523;12524;12525;12526;12527;12528;12529 12521 13 EILQSVYECIEK Unmodified 1509.7385 0.73849551 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 0 7 0 1 77.964 77.964 3 0.00030613 27657 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.809 39.002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4677 583 4511 10869 12530 12530 1 EILSDDKHDWDQR Unmodified 1655.754 0.75396265 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22;Q8BSE7 Clasp2 CLIP-associating protein 2 yes no 0 0 0 1 4 0 1 50.129 50.129 4 0.055212 16339 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.954 21.831 0 29.792 0 0 58.576 0 0 28 0 0 56 0 0 1 0 0 1 0 1840.6 4678 934 4512 10870 12531 12531 1 EILSEVER Unmodified 973.50803 0.50802529 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 3 0 1 53.836 53.836 2 0.0023221 18441 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.69 28.235 108.47 99.892 79.054 94.536 127.7 114.68 102 102 83 93 130 111 1 1 1 1 1 1 17168 4679 1827 4513 10871 12532 12532 1 EILSPVDIIDR Unmodified 1268.6976 0.69761697 2835 Q99JY8 Ppap2b Lipid phosphate phosphohydrolase 3 yes yes 0 0 0 0 9 4 1 1 75.961 75.961 2 0.049912 28771 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.194 15.662 117.97 109.57 98.131 113.67 95.816 164.63 111 112 102 111 102 157 2 2 2 2 2 2 15846 4680 2835 4514 10872;10873 12533;12534 12534 2 EILTLLQGVHQGTGFQDIPK Unmodified 2193.1794 0.17936793 2152 Q62348 Tsn Translin yes yes 0 0 0 0 11 0 1 81.751 81.751 3 0.00092125 25432 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.172 28.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4681 2152 4515 10874 12535 12535 1 EILVGDVGATITDPFK Unmodified 1673.8876 0.88760259 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 5.5 0.5 1 1 85.355 85.355 3 1.4039E-05 31726 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.197 51.375 29.844 17.895 18.458 19.667 0 0 28 19 19 19 0 0 1 1 1 1 0 0 1864.1 4682 3301 4516 10875;10876 12536;12537 12537 2 EILVGDVGQTVDDPYTTFVK Unmodified 2195.0998 0.099780209 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 7.17 2.91 1 1 1 1 1 1 82.907 82.907 3 1.1956E-22 32188 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130 99.41 286.81 167.92 286.31 252.89 233.51 148.17 269 168 278 251 231 139 4 5 5 6 3 4 136480 4683 1410 4517 10877;10878;10879;10880;10881;10882 12538;12539;12540;12541;12542;12543;12544;12545 12545 8 EIMAEIYK Unmodified 995.49977 0.49976879 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 0 6 0 1 65.303 65.303 2 0.008163 22510 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.56 23.966 88.492 32.265 67.948 0 66.005 57.813 83 37 65 0 65 56 1 1 1 0 1 1 5352.3 4684 1344 4518 10883 12546 12546 1 EIMIAAQK Unmodified 902.48954 0.48953845 1417 Q9D881;P19536;F7C106;A0A0A6YVR0 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 0 8.33 1.25 1 1 1 55.669 55.669 2 0.003264 16501 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.08 72.225 348.73 384.86 393.82 293 374.92 447.68 329 390 399 296 386 430 3 3 3 3 3 3 66526 4685 1417 4519 10884;10885;10886 12547;12548;12549 12548 3 EINLQDYEGHQK Unmodified 1472.6896 0.68957148 826 E9PV24 Fga Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 0 0 0 0 4 0 1 51.522 51.522 3 0.027476 17009 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.297 22.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4686 826 4520 10887 12550 12550 1 EINNAHAILTDATK Unmodified 1509.7787 0.77872084 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 0 7.14 2.59 2 2 1 1 1 52.904 52.904 3;4 1.0302E-21 17412 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.19 107.65 422.04 565.69 711.43 195.85 734.23 680.05 397 566 695 194 727 655 5 6 6 2 7 7 98284 4687 1682 4521 10888;10889;10890;10891;10892;10893;10894 12551;12552;12553;12554;12555;12556;12557;12558 12551 8 EINNAHAILTDATK Deamidation (N) 1510.7627 0.76273643 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 1 0 0 5 0 1 64.75 64.75 3 0.0023225 22864 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.577 22.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4688 1682 4521 10895 12559 12559 650;651 1 EINNAHAILTDATKR Unmodified 1665.8798 0.87983187 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 1 7 0.707 1 2 1 48.111 48.111 3;4 2.6755E-05 13662 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.344 74.624 374.51 338.92 428.44 241.65 175.72 634.59 353 349 422 237 176 600 4 4 3 2 2 4 33300 4689 1682 4522 10896;10897;10898;10899 12560;12561;12562;12563 12562 4 EINTNQEALK Unmodified 1158.5881 0.58806652 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 5 0.816 1 1 1 47.792 47.792 2;3 3.1919E-05 14909 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.51 51.821 168.97 34.677 65.992 86.128 93.082 95.416 158 37 65 84 93 92 3 1 2 2 1 2 11417 4690 1151 4523 10900;10901;10902 12564;12565;12566 12565 3 EINTNQEALKR Unmodified 1314.6892 0.68917755 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 9 4 1 1 40.34 40.34 3 3.12E-14 11415 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.47 78.92 480.18 196.23 282.56 215.13 409.14 469.09 450 204 282 216 416 451 2 1 1 1 2 2 50151 4691 1151 4524 10903;10904 12567;12568 12568 2 EIPAPSALTPK Unmodified 1122.6285 0.62847478 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 9.5 3.5 1 1 60.281 60.281 3 0.0028577 20282 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.676 32.738 98.194 129.05 158.72 89.771 128.55 96.271 93 130 158 93 130 93 2 2 2 2 2 1 15363 4692 487 4525 10905;10906 12569;12570 12569 2 EIPDPSSINAK Unmodified 1169.5928 0.59281755 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 5.5 0.5 1 1 57.268 57.268 2 2.6149E-06 19476 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.111 60.89 39.516 36.703 0 0 38.702 0 37 37 0 0 37 0 1 1 0 0 1 0 4320.6 4693 1042 4526 10907;10908 12571;12572 12571 2 EIPGIYVLSLEIGK Unmodified 1529.8705 0.87049596 1268 O88531;B1B0P8;B1B0P9 Ppt1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 0 7.5 0.5 1 1 92.705 92.705 3 0.0061583 34414 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.797 16.739 30.044 39.368 0 39.778 72.279 96.009 28 37 0 37 74 92 1 1 0 1 2 2 1996.7 4694 1268 4527 10909;10910 12573;12574 12573 2 EIPLDKEMQDAFQNAYMELGGLGER Unmodified 2853.3313 0.33132984 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 9.5 3.5 1 1 94.465 94.465 4 3.5945E-07 35877 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.658 40.762 29.933 0 18.694 38.455 55.35 0 28 0 19 37 55 0 1 0 1 1 2 0 9297.2 4695 2253 4528 10911;10912 12575;12576 12575 2 EIPLWIYSLK Unmodified 1260.7118 0.71181048 2328 Q80WG5 Lrrc8a Volume-regulated anion channel subunit LRRC8A yes yes 0 0 0 0 10 0 2 90.292 90.292 2;3 0.013337 29373 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.65 34.552 20.064 18.214 38.84 0 0 38.848 19 19 37 0 0 37 1 1 1 0 0 2 2071.4 4696 2328 4529 10913;10914 12577;12578 12578 2 EIPSHVLSK Unmodified 1008.5604 0.56039521 7 A0A087WQE6;A0A087WNT1;P83940 Tceb1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 0 6.5 0.5 1 1 48.646 48.646 3 0.0012367 14716 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.688 47.426 176.49 112.79 178.59 93.853 190.24 0 166 120 176 93 186 0 2 2 2 1 2 0 19610 4697 7 4530 10915;10916 12579;12580 12579 2 EIPVDAPWQAR Unmodified 1280.6513 0.65133548 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 6 0 1 64.216 64.216 2 0.022895 22017 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.461 20.654 69.344 0 67.461 56.565 33.097 87.534 65 0 65 56 37 83 1 0 1 1 1 1 4380.9 4698 2168 4531 10917 12581 12581 1 EIPVESIEEVSK Unmodified 1357.6977 0.69767655 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 3.5 0.5 1 1 67.043 67.043 3 2.5832E-05 24072 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.961 54.713 50.183 16.367 27.802 28.268 73.084 38.412 47 19 28 28 74 37 1 1 1 1 2 1 7298.6 4699 3176 4532 10918;10919 12582;12583 12583 2 EIQGFFNIPVDNLR Unmodified 1660.8573 0.85730551 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 8 0 1 83.646 83.646 2 0.00045341 29760 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.806 20.714 0 9.576 0 5.2925 9.1709 0 0 9 0 5 9 0 0 1 0 1 1 0 1307.5 4700 2671 4533 10920 12584 12584 1 EIQGHEPR Unmodified 964.47264 0.47264284 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.6 4.18 1 1 3 24.923 24.923 3 0.0013719 4208 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.308 48.471 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 12989 4701 2186 4534 10921;10922;10923;10924;10925 12585;12586;12587;12588;12589 12587 5 EIQGHQPR Unmodified 963.48863 0.48862725 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 22.83 22.83 3 0.0017531 3502 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.54 64.521 178.13 159 336.03 319.57 308.02 116 167 157 326 316 308 111 2 2 3 4 3 2 87641 4702 2148 4535 10926;10927;10928;10929 12590;12591;12592;12593 12592 4 EIQGLFEEK Unmodified 1091.5499 0.5498901 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 7.75 3.11 1 1 1 1 66.892 66.892 2;3 0.0009559 23954 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.377 42.351 206.7 241.27 263.48 39.925 224.78 314.17 195 244 254 37 225 300 2 3 1 1 2 2 44903 4703 1424 4536 10930;10931;10932;10933 12594;12595;12596;12597 12594 4 EIQHHLK Unmodified 903.49265 0.49265 491;2155 A2ALV3;Q62420;Q8BXU5;F6ZL13;Q62419 Sh3gl2;Sh3gl1 Endophilin-A1;Endophilin-A2 no no 0 0 0 0 8 3.56 1 1 1 31.998 31.998 3 0.013653 7011 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.342 18.626 305.87 350.47 205.08 337.6 287.43 426.73 287 352 213 325 297 408 3 4 3 4 3 4 24539 4704 491;2155 4537 10934;10935;10936 12598;12599;12600;12601 12599 4 EIQNAVQGVK Unmodified 1084.5877 0.58767259 1890 Q06890;E9PUU2;E9PXG5;E9Q8Y5;E9Q9B8;E9Q2G2 Clu Clusterin;Clusterin beta chain;Clusterin alpha chain yes no 0 0 0 0 6 0 1 50.99 50.99 2 3.1712E-05 15829 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.63 49.694 29.904 27.776 0 60.722 25.828 19.517 28 28 0 56 28 19 1 1 0 1 1 1 2418.2 4705 1890 4538 10937 12602 12602 1 EIQNTGDR Unmodified 931.43592 0.43592298 3266 Q9QXS1;E9Q3W4;A0A0R4J218 Plec Plectin yes no 0 0 0 0 3 0 1 27.378 27.378 2 0.026719 6172 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.269 15.288 0 38.671 41.714 31.65 44.656 58.422 0 37 42 32 46 56 0 1 1 1 1 1 7760.5 4706 3266 4539 10938 12603 12603 1 EIQPPFKPK Unmodified 1082.6124 0.61243078 2030;1425 P20444;Q4VA93;Q3TQ39 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 1 8.5 0.5 1 1 53.941 53.941 3 0.0075292 14835 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.643 35.168 199.67 296.82 342.19 154.31 158.12 406.96 188 297 340 148 159 386 1 2 2 1 1 2 35939 4707 1425;2030 4540 10939;10940 12604;12605 12605 2 EIQPPYKPK Unmodified 1098.6073 0.6073454 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 1 8 0 2 48.497 48.497 3 0.01583 13080 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.216 33.011 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4708 1796 4541 10941;10942 12606;12607 12606 2 EIQSITDESR Unmodified 1176.5622 0.5622457 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 6 4.97 1 1 1 45.732 45.732 2 3.0144E-15 14638 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 173.28 87.535 425.94 280.39 489.79 500.8 180.23 567.3 401 283 485 488 189 537 3 2 2 3 1 3 30044 4709 2727 4542 10943;10944;10945 12608;12609;12610;12611 12610 4 EIQTAVR Unmodified 815.45012 0.45011648 1349;1350 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M no no 0 0 0 0 7 3.54 1 1 1 1 36.809 36.809 2 0.0043127 9623 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.04 66.662 2520.5 2129 2695.1 1685.1 3374.8 2912 2374 2203 2690 1695 3396 2822 4 4 4 3 4 4 926460 4710 1349;1350 4543 10946;10947;10948;10949 12612;12613;12614;12615 12613 4 EIQTIMQFGDTEIK Unmodified 1651.8127 0.81272309 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 9.5 3.5 1 1 78.977 78.977 3 0.00048284 29167 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.246 43.367 0 173.7 175.18 108.42 131 0 0 166 176 111 130 0 0 2 2 2 2 0 26915 4711 2585 4544 10950;10951 12616;12617 12616 2 EIQVQHPAAK Unmodified 1119.6037 0.60365701 1827 P80318;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 6 0.816 1 1 1 38.636 38.636 3 0.0022511 9253 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.374 27.353 296.52 140.79 178.16 147.96 290.55 357.35 278 148 176 148 296 343 3 2 2 2 3 3 24758 4712 1827 4545 10952;10953;10954 12618;12619;12620 12620 3 EIRPALELLEPIEQK Unmodified 1776.9986 0.99855002 2132 Q61598;A0A1Y7VLG4 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 6.2 0.748 1 2 2 75.188 75.188 3;4 0.0012939 27359 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.394 41.256 256.83 61.992 244.09 237.31 159.7 253.4 241 65 240 231 166 241 6 2 6 5 4 5 21408 4713 2132 4546 10955;10956;10957;10958;10959 12621;12622;12623;12624;12625;12626 12623 6 EISEGDEVEVYSR Unmodified 1510.6787 0.67873203 92 A0A0G2JEP0;Q61584;A0A0G2JGL6 Fxr1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 0 1 0 1 52.06 52.06 2 6.6936E-07 15865 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.86 81.243 0 0 19.246 29.457 0 0 0 0 19 28 0 0 0 0 1 1 0 0 2578.2 4714 92 4547 10960 12627 12627 1 EISFAYEVLSNPEK Unmodified 1624.7985 0.79845323 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 6 0 1 78.73 78.73 3 0.001574 28796 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.213 33.962 29.85 38.419 0 29.927 36.008 38.414 28 38 0 28 37 37 1 1 0 1 1 1 4148.3 4715 3279 4548 10961 12628 12628 1 EISFAYEVLSNPEKR Unmodified 1780.8996 0.89956426 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 1 7.5 0.5 1 1 70.467 70.467 3 7.839E-05 24198 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.895 78.886 45.712 32.352 44.354 0 72.653 46.963 43 34 43 0 71 46 1 1 1 0 1 1 5291.1 4716 3279 4549 10962;10963 12629;12630 12629 2 EISLLPDNLLR Unmodified 1281.7293 0.72925145 2358 Q8BFP9 Pdk1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 0 0 0 0 7 0 1 80.397 80.397 2 0.023053 28782 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.401 25.416 39.397 26.659 28.498 0 37.384 38.375 37 28 28 0 37 37 1 1 1 0 1 1 2761.4 4717 2358 4550 10964 12631 12631 1 EISLWFQPEELVEYK Unmodified 1908.9509 0.95093113 1385 P15532 Nme1 Nucleoside diphosphate kinase A yes yes 0 0 0 0 8.11 2.73 1 1 4 1 2 94.766 94.766 2;3;4 7.6885E-07 35051 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.746 55.943 78.026 144.85 86.573 148.87 188.06 15.57 76 139 84 144 186 15 4 5 2 5 5 1 24998 4718 1385 4551 10965;10966;10967;10968;10969;10970;10971;10972;10973 12632;12633;12634;12635;12636;12637;12638;12639;12640;12641;12642;12643 12638 12 EISNFEYLMFLNTIAGR Unmodified 2016.9979 0.9978981 3165 Q9EPN1;A0A0A6YXX3;A0A0A6YXL6;E9Q3Y4;Q9ESE1;Q8BSM6 Nbea;Lrba Neurobeachin;Lipopolysaccharide-responsive and beige-like anchor protein yes no 0 0 0 0 9 0 1 97.387 97.387 3 0.0016385 34840 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.543 26.965 5.365 0 0 0 14.329 9.1851 5 0 0 0 14 9 1 0 0 0 1 1 1276.2 4719 3165 4552 10974 12644 12644 1 EISYAIK Unmodified 822.44872 0.4487195 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3;G3UXX2 Dnm1;Dnm3;Dnm2 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 0 8.29 2.12 1 2 2 1 1 55.079 55.079 2;3 0.0054013 16231 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.62 50.308 1617.5 1559.5 1706.1 1101 1175.3 1770.1 1524 1595 1710 1091 1210 1692 5 6 5 5 5 6 360980 4720 118;1534;960;1082 4553 10975;10976;10977;10978;10979;10980;10981 12645;12646;12647;12648;12649;12650;12651 12648 7 EITALAPSTMK Unmodified 1160.6111 0.61111015 1673;1781;1791 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1;P68033;P68134;P62737;P63268 Actb;Actg1;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 0 0 8.69 2.95 1 1 4 2 2 1 2 1 2 61.615 61.615 2;3;4 1.2515E-13 19496 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 153.1 103.06 1864.7 1722.3 1941.7 2331.2 2341.6 2851.8 1752 1752 1925 2264 2411 2735 11 12 12 14 13 13 1870500 4721 1673;1781;1791 4554 10982;10983;10984;10985;10986;10987;10988;10989;10990;10991;10992;10993;10994;10995;10996;10997 12652;12653;12654;12655;12656;12657;12658;12659;12660;12661;12662;12663;12664;12665;12666;12667;12668;12669;12670;12671;12672;12673 12661 22 EITALAPSTMK Oxidation (M) 1176.606 0.60602477 1673;1781;1791 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1;P68033;P68134;P62737;P63268 Actb;Actg1;Actc1;Acta1;Acta2;Actg2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle no no 0 0 1 0 8.2 2.48 1 2 1 1 57.89 57.89 3 0.0015477 18813 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.666 38.779 772.04 231.36 552.48 664.79 663.65 829.07 723 241 529 630 667 788 8 4 6 7 8 8 107950 4722 1673;1781;1791 4554 10998;10999;11000;11001;11002 12674;12675;12676;12677;12678;12679;12680;12681;12682;12683;12684 12684 119 11 EITEGDEVEVYSR Unmodified 1524.6944 0.69438209 2218 Q6P5B5;Q9WVR4 Fxr2 Fragile X mental retardation syndrome-related protein 2 yes no 0 0 0 0 1 0 1 53.411 53.411 2 0.00034218 16546 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.465 66.288 0 9.576 0 9.4714 19.439 0 0 9 0 9 19 0 0 1 0 1 1 0 1458.9 4723 2218 4555 11003 12685 12685 1 EITHGNR Unmodified 825.40931 0.4093143 2909 Q9CQ40 Mrpl49 39S ribosomal protein L49, mitochondrial yes yes 0 0 0 0 5 0 1 18.386 18.386 3 0.060097 2576 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.561 30.526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4724 2909 4556 11004 12686 12686 1 EITHIHYQR Unmodified 1195.6098 0.60980502 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 32.751 32.751 4 0.0010133 7772 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.426 64.952 89.526 121.53 70.261 87.128 26.375 107.98 84 121 74 84 28 102 2 3 2 2 1 2 32099 4725 1362 4557 11005;11006;11007;11008 12687;12688;12689;12690 12687 4 EITQIQDTNDINDITYADLNLPK Unmodified 2646.3025 0.30245578 2224 Q6P6I8;A0A0R4J1Z7;E0CX65 Sirpa yes no 0 0 0 0 4.8 0.748 2 2 1 82.289 82.289 3;4;5 1.3251E-07 31142 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.939 46.63 30.044 20.073 29.092 20.767 28.62 19.437 28 19 28 19 28 19 1 1 2 1 1 1 16747 4726 2224 4558 11009;11010;11011;11012;11013 12691;12692;12693;12694;12695 12693 5 EIVDAAEDYAK Unmodified 1222.5717 0.57174776 2803 Q922B2;Q8BJY7 Dars Aspartate--tRNA ligase, cytoplasmic yes no 0 0 0 0 6 4.06 1 2 1 61.622 61.622 2;3 1.069E-08 21740 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.32 91.595 168.28 69.702 182.75 124.22 101.52 146.34 158 74 176 121 102 140 3 1 3 2 1 3 24456 4727 2803 4559 11014;11015;11016;11017 12696;12697;12698;12699 12697 4 EIVDWFNALR Unmodified 1261.6455 0.64552182 849 E9PY16;Q8R2V5 Adap1;Adap2 Arf-GAP with dual PH domain-containing protein 2 yes no 0 0 0 0 8 0 1 89.017 89.017 2 0.055952 32191 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.268 20.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4728 849 4560 11018 12700 12700 1 EIVESCDLK Unmodified 1091.5169 0.51687542 2001 Q3UPL0;S4R2A9;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 4 0 1 53.583 53.583 2 0.023877 18000 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.582 41.946 30.044 0 0 0 0 29.848 28 0 0 0 0 28 1 0 0 0 0 1 1878.6 4729 2001 4561 11019 12701 12701 1 EIVESGR Unmodified 788.40283 0.40283194 3239;2694 Q9JKY5;A0A0G2JFU3;Q8VD75;A0A0J9YUA3 Hip1r;Hip1 Huntingtin-interacting protein 1-related protein;Huntingtin-interacting protein 1 no no 0 0 0 0 3 0 1 33.392 33.392 2 0.030587 9097 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.813 27.208 24.395 0 47.76 42.396 35.251 43.766 23 0 46 42 37 42 1 0 1 1 1 1 9843.8 4730 3239;2694 4562 11020 12702 12702 1 EIVGWSNK Unmodified 931.47633 0.47633123 1578 P48318;D3Z5S3 Gad1 Glutamate decarboxylase 1 yes no 0 0 0 0 7.5 0.5 1 1 57.553 57.553 2 0.0060906 17395 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.41 56.853 187.72 69.257 130.1 219.71 284.02 238.14 176 74 130 213 289 231 2 1 1 2 2 2 11121 4731 1578 4563 11021;11022 12703;12704 12704 2 EIVHLQAGQCGNQIGAK Unmodified 1821.9156 0.91556545 1795;3072 P68372;Q9D6F9 Tubb4b;Tubb4a Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 7.25 2.21 4 4 6 3 1 2 50.648 50.648 3;4;5 4.9409E-69 16067 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 204.67 0 2799.6 2366.1 2801 2433.6 3190.8 3145.6 2631 2422 2781 2406 3234 3028 15 17 17 17 19 19 1366700 4732 1795;3072 4564 11023;11024;11025;11026;11027;11028;11029;11030;11031;11032;11033;11034;11035;11036;11037;11038;11039;11040;11041;11042 12705;12706;12707;12708;12709;12710;12711;12712;12713;12714;12715;12716;12717;12718;12719;12720;12721;12722;12723;12724;12725;12726;12727;12728 12727 24 EIVLADVIDNDSWR Unmodified 1643.8155 0.81550028 3146 Q9DCL9 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 0 4.5 0.5 1 1 83.423 83.423 3 0.0069704 31719 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.964 33.058 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 1543.1 4733 3146 4565 11043;11044 12729;12730 12730 2 EIVQDGDHMIIR Unmodified 1424.7082 0.70819844 1872 Q00915 Rbp1 Retinol-binding protein 1 yes yes 0 0 0 0 4 0 1 52.62 52.62 3 0.0069706 17334 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.732 20.926 39.464 0 39.835 0 38.702 0 37 0 37 0 37 0 1 0 1 0 1 0 7782.3 4734 1872 4566 11045 12731 12731 1 EIVSFGSGYGGNSLLGK Unmodified 1683.8468 0.84680041 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39;A0A2I3BRX1 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 75.12 75.12 3 2.8985E-06 25762 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.408 74.609 60.088 67.932 73.461 118.04 0 138.58 56 65 74 112 0 130 1 1 1 2 0 2 12124 4735 172 4567 11046;11047 12732;12733 12732 2 EIVSGMK Unmodified 762.39458 0.39457544 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 7.5 0.5 1 1 49.772 49.772 2 0.026957 14330 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.369 37.582 186.89 131.65 217.77 135.21 198.81 152.09 176 139 215 139 201 148 1 1 1 1 1 1 18817 4736 2889 4568 11048;11049 12734;12735 12734 2 EIVTNFLAGFEP Unmodified 1335.6711 0.67106787 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8.78 3.33 1 1 2 1 1 1 1 1 101.81 101.81 2 4.4048E-20 36004 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 153.05 117.6 69.465 91.611 76.96 91.737 115.51 48.921 65 87 74 90 111 46 5 6 7 6 7 3 279320 4737 1881 4569 11050;11051;11052;11053;11054;11055;11056;11057;11058 12736;12737;12738;12739;12740;12741;12742;12743;12744;12745;12746;12747;12748;12749;12750;12751;12752;12753 12740 18 EIVTNFLAGFEP Deamidation (N) 1336.6551 0.65508346 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 0 5.5 0.5 1 1 99.525 99.525 2 3.6433E-10 37089 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.3 88.136 8.5594 4.8875 12.728 13.249 15.884 7.0908 8 5 12 13 16 7 2 1 1 2 3 2 3819.1 4738 1881 4569 11059;11060 12754;12755;12756 12756 767 3 EIVTYTK Unmodified 852.45928 0.45928418 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 7 0 1 50.869 50.869 2 0.032145 14892 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.568 45.732 0 0 85.993 85.594 0 108.73 0 0 83 83 0 102 0 0 1 1 0 1 5599.2 4739 539 4570 11061 12757 12757 1 EIWGVEPSDLQIPPPNLPKD Unmodified 2243.1474 0.1473991 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 7.86 3.31 2 2 1 2 85.542 85.542 3;4 1.0565E-10 32694 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.975 66.28 366.66 298.6 402.67 280.09 398.68 448.11 344 298 393 270 400 427 10 11 11 10 11 12 23477 4740 2555 4571 11062;11063;11064;11065;11066;11067;11068 12758;12759;12760;12761;12762;12763;12764;12765;12766;12767;12768;12769;12770;12771;12772;12773;12774;12775 12762 18 EIWGVEPSDLQIPPPNLPKD Deamidation (N) 2244.1314 0.13141469 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 1 0 1 7 0 1 85.556 85.556 3 0.0012654 31111 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.814 37.222 29.787 17.736 28.232 19.084 0 20.254 28 19 28 19 0 19 1 1 1 1 0 1 2169.3 4741 2555 4571 11069 12776 12776 940 1 EIYNQVNVVLK Unmodified 1317.7293 0.72925145 2800 Q921M7;A0A2I3BRN5;A0A2I3BPH9;A0A2I3BQK1 Fam49b Protein FAM49B yes no 0 0 0 0 7 0 1 67.774 67.774 3 0.0010641 22894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.267 39.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4742 2800 4572 11070 12777 12777 1 EIYTHFTCATDTK Unmodified 1585.7083 0.70825802 1330;622 B2RSH2;P08752 Gnai1;Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2 no no 0 0 0 0 6 0 1 52.529 52.529 3 0.0070965 16522 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.112 26.554 127.36 127.62 126.52 131.13 181.55 172.84 120 130 130 130 185 167 1 1 1 1 1 1 7515.8 4743 622;1330 4573 11071 12778 12778 1 EIYTNLGPR Unmodified 1061.5506 0.55055881 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 6 0 1 51.543 51.543 2 0.0028496 16070 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.178 42.212 48.958 0 67.156 65.706 71.051 97.111 46 0 65 65 74 93 1 0 1 1 1 1 3253.5 4744 1813 4574 11072 12779 12779 1 EKAEEDR Unmodified 875.39847 0.39847484 827 E9PV44;O35143 Atpif1 ATPase inhibitor, mitochondrial yes no 0 0 0 1 3 0 1 24.646 24.646 3 0.033606 4907 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.378 16.133 148.82 384.44 270.8 430.31 786.77 363.44 142 375 290 422 783 362 1 1 1 1 1 1 31976 4745 827 4575 11073 12780 12780 1 EKDDAPVADGVEK Unmodified 1371.6518 0.65178899 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 1 5.67 3.97 4 2 1 2 45.035 45.035 3;4 0.00022774 14494 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.175 48.939 607.83 783.26 750.21 846.84 1538.7 799.61 571 786 758 830 1527 790 4 9 8 7 8 8 132690 4746 1318 4576 11074;11075;11076;11077;11078;11079;11080;11081;11082 12781;12782;12783;12784;12785;12786;12787;12788;12789;12790 12781 10 EKDVLEDIPR Unmodified 1212.635 0.63501672 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 3 0 1 57.591 57.591 3 0.020154 20082 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.359 7.9192 39.701 0 0 100.7 50.595 97.694 37 0 0 93 56 93 1 0 0 1 1 1 8130.4 4747 1424 4577 11083 12791 12791 1 EKEAEEAEK Unmodified 1061.4877 0.48768378 2933 Q9CQK7 Rwdd1 RWD domain-containing protein 1 yes yes 0 0 0 1 4 0 1 35.907 35.907 3 0.0027268 9592 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.882 56.823 39.215 96.308 0 59.834 73.043 46.952 37 93 0 56 74 46 1 1 0 1 1 1 2717.6 4748 2933 4578 11084 12792 12792 1 EKEESYDLILSR Unmodified 1480.7409 0.74093835 1445 P24472 Gsta4 Glutathione S-transferase A4 yes yes 0 0 0 1 5.5 0.5 1 1 57.047 57.047 3 0.00059246 19496 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.527 48.514 217.13 71.841 235.88 0 301.44 268.56 204 74 223 0 297 260 2 1 2 0 2 2 38963 4749 1445 4579 11085;11086 12793;12794 12793 2 EKEGAALDQDNR Unmodified 1344.627 0.62697123 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 3.5 0.5 1 1 35.259 35.259 3 0.00011124 9254 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.189 67.835 197.24 0 213.21 146.46 138.22 193.27 185 0 204 148 142 185 2 0 2 2 1 1 33474 4750 510 4580 11087;11088 12795;12796 12796 2 EKEPIAASTNR Unmodified 1214.6255 0.62551466 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 34.447 34.447 3 7.5232E-08 8406 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.96 82.907 514.28 404.62 406.26 538.26 379.88 676.73 483 418 407 516 401 645 3 3 3 3 3 4 170630 4751 551 4581 11089;11090;11091;11092 12797;12798;12799;12800 12800 4 EKEQLMASDDFGR Unmodified 1524.6879 0.68785692 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 5 0 1 52.486 52.486 3 0.00024303 17102 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.243 77.704 177.73 84.046 174.76 0 135.98 0 167 93 167 0 130 0 1 1 1 0 1 0 21645 4752 551 4582 11093 12801 12801 1 EKEVEAIQAQAQALAQEDQSAGEVER Unmodified 2826.3632 0.36315855 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 7.33 4.03 1 1 1 69.813 69.813 4 2.5167E-61 25580 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 159.1 146.42 100.07 103.09 46.195 0 74.093 159.92 94 103 46 0 75 152 4 3 1 0 2 4 28499 4753 2186 4583 11094;11095;11096 12802;12803;12804;12805 12802 4 EKEVVPDFPEDK Unmodified 1430.6929 0.69292553 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 6.67 4.5 1 1 1 57.527 57.527 3 0.00027531 20479 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.457 65.076 88.188 20.216 216.63 112.08 27.906 168.43 83 19 204 111 28 158 1 1 2 2 1 2 27598 4754 510 4584 11097;11098;11099 12806;12807;12808 12806 3 EKFSPLTANLMNLLAENGR Unmodified 2117.0939 0.093923745 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 1 10.3 0.471 2 1 84.522 84.522 3;4 6.5787E-07 26356 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.301 62.874 39.226 46.934 67.987 0 19.874 0 37 46 65 0 19 0 2 1 2 0 1 0 9619.5 4755 3110 4585 11100;11101;11102 12809;12810;12811;12812 12812 4 EKFSPLTANLMNLLAENGR Deamidation (N) 2118.0779 0.07793933 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 1 0 1 10 0 1 86.513 86.513 4 0.0045265 27791 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.955 34.297 0 19.729 29.112 0 0 20.254 0 19 28 0 0 19 0 1 1 0 0 1 3774.9 4756 3110 4585 11103 12813 12813 1077;1078 1 EKGADFLVTEVENGGSLGSK Deamidation (N) 2036.9902 0.99022976 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 1 0 1 6 3.16 2 3 1 68.935 68.935 3;4 1.1702E-16 24676 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.43 103.72 275.9 190.79 260.58 280.55 280.1 224.39 259 195 260 268 278 214 4 3 5 4 3 4 81527 4757 1609 4586 11104;11105;11106;11107;11108;11109 12814;12815;12816;12817;12818;12819 12817 619 6 EKGADFLVTEVENGGSLGSK Unmodified 2036.0062 0.006214175 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 0 0 1 5 0 1 72.587 72.587 4 2.5458E-05 26646 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.637 33.403 98.63 100.04 109.93 82.477 89.843 106.17 93 102 111 83 93 102 2 2 2 2 2 2 5723.4 4758 1609 4586 11110 12820;12821 12821 2 EKIDLENTLEQEQEALVNR Unmodified 2270.139 0.13901926 730 D3YZP9 Ccdc6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 1 4 0 1 74.866 74.866 4 6.745E-06 27622 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.567 46.726 0 0 0 41.196 17.982 0 0 0 0 38 19 0 0 0 0 1 1 0 1762.5 4759 730 4587 11111 12822 12822 1 EKIEAELQDICNDVLELLDK Unmodified 2386.1938 0.19375695 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 1 13 0 1 113.52 113.52 4 8.9075E-07 44780 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.25 50.94 6.4223 16.832 14.103 29.073 28.341 12.41 6 16 14 27 28 12 1 2 2 2 2 2 2083.6 4760 2944 4588 11112 12823;12824;12825 12825 3 EKLCYVALDFEQEMATAASSSSLEK Unmodified 2806.3041 0.30411203 1673;1781 P60710;E9Q1F2;E9Q5F4;P63260 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 1 6.75 0.829 2 1 1 93.116 93.116 4;5 2.8815E-16 35215 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.341 55.546 74.724 33.527 140.92 116.71 60.636 64.131 70 32 135 112 61 61 3 1 5 5 3 4 8525.3 4761 1673;1781 4589 11113;11114;11115;11116 12826;12827;12828;12829;12830;12831;12832 12826 7 EKLDILDQER Unmodified 1257.6565 0.65648044 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9.5 3.5 1 1 55.448 55.448 3 0.052324 18179 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.659 17.832 603.27 496.93 619.34 539.94 594.73 752.68 568 515 625 538 617 722 2 2 2 2 2 2 90356 4762 551 4590 11117;11118 12833;12834 12833 2 EKLELVSYFGK Unmodified 1311.7075 0.70745338 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 11 2 1 1 70.801 70.801 3 0.0025322 23200 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.108 49.53 949.66 669.23 685.95 702.31 1164.5 1031.4 892 686 696 700 1178 987 3 2 2 3 3 2 119730 4763 1390 4591 11119;11120 12835;12836;12837 12835 3 EKPAVLK Unmodified 783.48544 0.48543935 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 8 0 1 44.502 44.502 3 0.059809 11302 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.071 24.882 485.52 319.95 542.39 405.97 0 547.92 457 340 538 401 0 514 1 1 1 1 0 1 25347 4764 2028 4592 11121 12838 12838 1 EKPDDPLNYFIGGCAGGLTLGAR Unmodified 2420.1794 0.17944429 1095 G5E814;Q9D8B4 Ndufa11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 yes no 0 0 0 1 10 3 1 1 81.519 81.519 3;4 1.119E-05 31382 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.029 32.881 30.044 0 0 29.762 44.743 58.419 28 0 0 28 46 56 1 0 0 1 1 1 5706.3 4765 1095 4593 11122;11123 12839;12840 12840 2 EKPELQFPFLQDEDTVATLHECK Unmodified 2773.3269 0.32689639 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 5.5 0.5 2 2 74.474 74.474 4;5 4.9994E-15 26793 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.905 71.35 296.49 189.14 191.42 187.73 322.58 465.17 278 195 194 185 324 445 5 3 3 3 5 6 102990 4766 1390 4594 11124;11125;11126;11127 12841;12842;12843;12844;12845;12846 12844 6 EKPGQVSEVAQLISQTLEQER Unmodified 2368.2234 0.22341759 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4 Ppp1r9a yes no 0 0 0 1 7 0 1 82.942 82.942 3 9.7778E-05 30062 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.061 38.33 20.387 0 0 39.589 45.317 28.555 19 0 0 37 46 28 1 0 0 1 1 1 2303 4767 1119 4595 11128 12847 12847 1 EKPLSGGDSEVGAPQPSR Unmodified 1809.8857 0.88570511 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 6.6 3.26 1 2 1 1 43.071 43.071 3;4 1.4503E-10 12536 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.449 65.371 138.56 126.63 140.43 155.62 95.477 127.92 130 130 140 148 93 120 3 4 3 3 2 2 16855 4768 1275 4596 11129;11130;11131;11132;11133 12848;12849;12850;12851;12852 12852 5 EKPPITVVGDVGGR Unmodified 1422.7831 0.78307794 2671;584 Q8R574;B1AT82;Q9D0M1 Prpsap2;Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 2;Phosphoribosyl pyrophosphate synthase-associated protein 1 no no 0 0 0 1 6.5 0.5 1 1 53.187 53.187 3 0.0002924 16856 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.344 51.766 236.69 68.612 196.36 209.24 108.12 244.23 222 74 195 204 111 232 2 1 2 2 1 2 19496 4769 2671;584 4597 11134;11135 12853;12854 12853 2 EKPYFPIPEDCTFIQNVPLEDR Unmodified 2706.3 0.29995335 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 1 6 0.816 1 1 1 79.027 79.027 3;4 0.00013111 28165 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.202 46.915 29.807 76.27 27.275 28.3 121.63 75.413 28 74 28 28 120 74 2 3 1 1 3 3 15333 4770 2714 4598 11136;11137;11138 12855;12856;12857 12857 3 EKVDLLFLGK Unmodified 1160.6805 0.68051035 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9;A0A0U1RQB4 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 1 8 0 1 74.204 74.204 3 0.011088 25256 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.255 28.247 49.026 65.854 0 61.208 0 69.29 46 65 0 56 0 65 1 1 0 1 0 1 3836.2 4771 3155 4599 11139 12858 12858 1 EKVESELR Unmodified 988.51892 0.51892433 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 13 0 1 37.466 37.466 3 0.031532 10161 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.216 2.2441 569.66 0 739.09 637.98 0 734.47 535 0 712 624 0 689 1 0 1 1 0 1 50822 4772 1005 4600 11140 12859 12859 1 EKVEVQLPELFHK Unmodified 1594.8719 0.87189295 802 Q3UPV6;E0CXZ9;P62482 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 1 7 0 1 67.393 67.393 4 0.0036546 22646 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.377 33.799 78.87 0 89.408 0 0 0 74 0 83 0 0 0 1 0 1 0 0 0 9281.6 4773 802 4601 11141 12860 12860 1 EKVGEQAQVVIIDMNDPSNPIR Unmodified 2451.2428 0.24277283 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 5.33 0.471 2 1 69.615 69.615 3;4 3.5415E-06 25202 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.904 50.084 59.652 34.612 43.908 98.873 8.4674 69.29 56 37 46 93 9 65 1 1 1 2 1 1 8092 4774 2185 4602 11142;11143;11144 12861;12862;12863 12862 3 EKYIDQEELNK Unmodified 1407.6882 0.6881745 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 1 5.5 0.5 1 1 51.444 51.444 3 9.8483E-05 15919 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.288 25.747 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4775 1322;1354 4603 11145;11146 12864;12865 12865 2 ELADENQTLK Unmodified 1159.5721 0.57208211 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 4 0 1 49.179 49.179 2 3.2093E-05 15895 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.42 68.185 19.853 37.055 58.269 0 0 29.848 19 37 56 0 0 28 1 1 1 0 0 1 4246.3 4776 3000 4604 11147 12866 12866 1 ELADESLEK Unmodified 1032.4975 0.49752018 507 A2AQN5;A2AQN4;Q9QXG4;F7CU63 Acss2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 0 0 0 0 3 0 1 53.11 53.11 2 0.058941 18113 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.066 0.89958 59.686 0 67.51 56.549 33.758 68.327 56 0 65 56 37 65 1 0 1 1 1 1 2341.9 4777 507 4605 11148 12867 12867 1 ELADLEEENR Unmodified 1216.5572 0.55716033 110 A0A0J9YTU3;Q5SXY1;A0A0J9YUF8;A0A0J9YUR2;A0A0J9YV86 Specc1 Cytospin-B yes no 0 0 0 0 2 0 1 51.688 51.688 3 0.0010713 16918 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.387 52.913 0 0 8.8523 19.883 18.961 0 0 0 9 19 19 0 0 0 1 1 1 0 2191 4778 110 4606 11149 12868 12868 1 ELAEAQDDSILK Unmodified 1330.6616 0.6616254 1889 Q06185 Atp5i ATP synthase subunit e, mitochondrial yes yes 0 0 0 0 7.4 4.59 1 2 2 60.804 60.804 2;3 1.8483E-20 21435 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 158.04 103.06 543.99 258.12 464.9 323.92 149.99 559.63 509 268 454 314 158 529 4 4 4 3 2 7 95260 4779 1889 4607 11150;11151;11152;11153;11154 12869;12870;12871;12872;12873;12874;12875;12876 12873 8 ELAEAVSGGR Unmodified 987.49852 0.49852324 3375 Q9Z1F9 Uba2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 0 4.5 0.5 1 1 45.006 45.006 2 0.0090789 13888 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.881 31.67 99.25 59.809 39.835 40.441 38.702 0 93 60 37 37 37 0 2 1 1 1 1 0 9615.1 4780 3375 4608 11155;11156 12877;12878 12877 2 ELAEDGYSGVEVR Unmodified 1422.6627 0.66268803 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 5.5 4.39 1 1 1 1 52.979 52.979 2;3 1.9911E-40 18055 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 194.43 138.87 166.98 51.362 205.71 54.706 66.351 39.442 157 56 196 56 65 37 5 2 5 2 1 1 28709 4781 1755 4609 11157;11158;11159;11160 12879;12880;12881;12882;12883 12880 5 ELAEEAAR Unmodified 887.43486 0.43486035 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0 1 36.514 36.514 2 0.004198 10283 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.29 45.306 0 0 70.33 0 46.111 58.38 0 0 65 0 46 56 0 0 1 0 1 1 27048 4782 3266 4610 11161 12884 12884 1 ELAEEEPHLVEQFQK Unmodified 1824.8894 0.8893935 2683 Q8VCI5 Pex19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 0 3 0 1 62.941 62.941 3 7.1699E-06 22553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.614 58.951 0 28.808 58.864 0 57.607 28.204 0 28 56 0 56 28 0 1 1 0 1 1 2125.5 4783 2683 4611 11162 12885 12885 1 ELAEQELEK Unmodified 1087.5397 0.53971935 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3.5 0.5 1 1 53.675 53.675 3 0.0016821 18011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.192 31.594 29.466 114.12 119.71 94.753 45.449 117.03 28 111 121 94 46 111 1 2 2 2 1 2 9700.5 4784 3266 4612 11163;11164 12886;12887 12887 2 ELAESDFASTFR Unmodified 1371.6307 0.63065962 2997 Q9CZ04;D3Z440;D3YVI6;D3Z0S0 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 4 0 1 65.28 65.28 2 0.00096371 23286 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.358 54.618 0 0 58.508 46.791 0 0 0 0 56 46 0 0 0 0 1 1 0 0 3774.4 4785 2997 4613 11165 12888 12888 1 ELAETLQQK Unmodified 1058.5608 0.56078914 776 D3Z4S3 Ptrhd1 Putative peptidyl-tRNA hydrolase PTRHD1 yes yes 0 0 0 0 5 0 1 54.414 54.414 3 0.00090099 18075 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.516 36.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4786 776 4614 11166 12889 12889 1 ELAFLEATK Unmodified 1020.5492 0.54916182 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 0 6.67 0.471 1 2 71.022 71.022 2;3 0.0070231 24374 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.955 35 60.088 29.337 27.245 69.421 0 108.73 56 28 28 65 0 102 1 1 1 2 0 2 6819.4 4787 441 4615 11167;11168;11169 12890;12891;12892 12891 3 ELAFQISK Unmodified 934.51238 0.51238239 3379 Q9Z1N5;Q8VDW0;G3UXI6;D6RHT5 Ddx39b;Ddx39a;Ddx39 Spliceosome RNA helicase Ddx39b;ATP-dependent RNA helicase DDX39A yes no 0 0 0 0 8 0 1 64.97 64.97 2 0.010016 20933 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.033 19.699 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4788 3379 4616 11170 12893 12893 1 ELAGHTGYLSCCR Unmodified 1522.6657 0.66568169 1750 P62874;H3BKR2 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 41.417 41.417 3 1.3037E-15 11496 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.26 122.9 245.2 369.03 389.41 432.25 365.88 217.46 232 366 389 423 361 204 3 3 3 4 2 2 119570 4789 1750 4617 11171;11172;11173;11174 12894;12895;12896;12897 12895 4 ELAGLFEHK Unmodified 1042.5447 0.54474515 3450;8 A0A087WNU5;S4R2K9;S4R208 Ank3 no no 0 0 0 0 7 0 1 61.479 61.479 3 0.012943 19922 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.579 25.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2393.3 4790 8;3450 4618 11175 12898 12898 1 ELAGQHEDDSLELQGLLEDER Unmodified 2395.1139 0.11392672 138 A0A0N4SW14;E6Y2W7;D3Z165;E6Y2W6;E9QP94;Q3TVA9 Ccdc136 Coiled-coil domain-containing protein 136 yes no 0 0 0 0 3 0 1 69.655 69.655 3 7.6915E-11 25746 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.853 57.239 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4791 138 4619 11176 12899 12899 1 ELAHLEDSDQAR Unmodified 1382.6426 0.64262129 786 D3Z7D3;F8WI56;Q8BWT5 Dip2a Disco-interacting protein 2 homolog A yes no 0 0 0 0 2.5 0.5 1 1 40.845 40.845 3 0.0011353 12261 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.08 39.417 20.292 18.848 0 69.845 63.782 29.106 19 19 0 65 65 28 1 1 0 2 2 1 4771.7 4792 786 4620 11177;11178 12900;12901 12900 2 ELALNTALFAK Unmodified 1189.6707 0.67067394 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 0 9 0 2 76.466 76.466 2;3 0.00077501 25628 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.451 50.208 0 0 0 29.197 130.78 37.308 0 0 0 28 130 37 0 0 0 1 2 1 9677.3 4793 2207 4621 11179;11180 12902;12903 12902 2 ELALPGELTQSR Unmodified 1312.6987 0.69867961 1539 P40336;A0A1W2P7Z9 Vps26a Vacuolar protein sorting-associated protein 26A yes no 0 0 0 0 5 0 1 64.099 64.099 2 0.0010165 22568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.474 43.945 34.038 27.042 27.233 28.476 26.835 33.346 32 28 28 28 28 32 1 1 1 1 1 1 3701.4 4794 1539 4622 11181 12904 12904 1 ELALQPK Unmodified 797.4647 0.46470391 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 6 0 1 52.647 52.647 3 0.063591 16594 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.849 9.0569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4795 3002 4623 11182 12905 12905 1 ELALSSPEDLTQDFEELKR Unmodified 2219.0958 0.095757464 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 5 0 1 82.564 82.564 3 2.4936E-06 31398 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.335 56.708 49.07 55.521 45.12 48.388 75.181 49.036 46 56 47 47 74 46 1 2 2 1 1 1 3245.6 4796 510 4624 11183 12906;12907 12906 2 ELAMPGEDLK Unmodified 1101.5376 0.53761086 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 62.843 62.843 2 0.00011525 22050 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.26 68.501 39.168 0 89.609 0 46.111 58.38 37 0 83 0 46 56 1 0 1 0 1 1 3432.7 4797 2361 4625 11184;11185;11186;11187 12908;12909;12910;12911 12909 4 ELAPAVSVLQLFCSSPKPALR Unmodified 2282.2457 0.24567336 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 1 12 0 1 87.849 87.849 4 0.00010047 24846 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.566 46.249 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1407.7 4798 3265 4626 11188 12912 12912 1 ELAQEQAR Unmodified 943.47231 0.47230849 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3 0 1 31.079 31.079 2 0.05886 7848 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.892 28.957 0 24.097 22.406 23.209 31.595 23.616 0 23 23 23 32 23 0 1 1 1 1 1 8798.4 4799 3266 4627 11189 12913 12913 1 ELAQQIQK Unmodified 956.5291 0.52909508 1345;1679 P10630;Q8BTU6;A0A338P6X5;P60843 Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 6.5 0.5 1 1 48.54 48.54 2;3 0.0061125 13778 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.31 49.72 122.98 137.36 134.12 69.258 79.453 99.138 116 139 135 69 79 93 2 2 2 1 1 1 21326 4800 1345;1679 4628 11190;11191 12914;12915 12915 2 ELAQTTR Unmodified 817.42938 0.42938104 1543 P42932;H3BL49;H3BKR8 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 5 0.816 1 1 1 30.551 30.551 2 0.010811 6617 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.31 41.084 142.43 115.91 129.34 57.492 146.2 173.85 134 120 129 56 148 167 2 2 2 1 2 2 30043 4801 1543 4629 11192;11193;11194 12916;12917;12918 12917 3 ELASQPDVDGFLVGGASLKPEFVDIINAK Deamidation (N) 3029.5597 0.55973309 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 1 0 1 7.4 2.87 1 2 1 1 93.345 93.345 4 1.3763E-25 34631 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.948 76.647 9.657 49.214 47.513 50.083 8.3468 63.722 9 47 47 47 9 60 1 2 2 3 1 3 15141 4802 1405 4630 11195;11196;11197;11198;11199 12919;12920;12921;12922;12923 12920 504 5 ELASQPDVDGFLVGGASLKPEFVDIINAK Unmodified 3028.5757 0.57571751 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 1 9.5 2.6 1 2 3 2 4 92.885 92.885 3;4;5 9.5767E-96 34489 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 176.26 159.46 500 391.14 300.43 497.39 385.44 650.38 468 398 287 462 380 615 7 7 7 8 9 8 246680 4803 1405 4630 11200;11201;11202;11203;11204;11205;11206;11207;11208;11209;11210;11211 12924;12925;12926;12927;12928;12929;12930;12931;12932;12933;12934;12935;12936;12937;12938;12939 12926 16 ELATQQLPHLLK Unmodified 1389.798 0.79799972 39 A0A0A0MQ90;P97352 S100a13 Protein S100-A13 yes no 0 0 0 0 10 0 1 56.896 56.896 3 0.010545 14596 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.288 20.774 0 76.561 130.08 134.34 0 197.21 0 74 130 130 0 185 0 1 1 1 0 1 8729.9 4804 39 4631 11212 12940 12940 1 ELATVLSDQPGLLGPK Unmodified 1636.9036 0.903587 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 7.5 0.5 1 1 78.9 78.9 3;4 0.00023639 28177 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.709 45.571 79.934 18.394 75.267 73.951 129.97 75.974 75 19 74 74 130 74 2 1 2 2 2 1 7591.2 4805 513 4632 11213;11214 12941;12942 12941 2 ELAVETK Unmodified 788.42798 0.42798405 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7 3.16 1 1 1 1 1 47.645 47.645 2;3 0.0052912 14882 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.55 43.832 2142.9 2106 2348 2189.3 1393.4 876.9 2020 2152 2387 2155 1431 842 4 4 4 4 3 2 190840 4806 1554 4633 11215;11216;11217;11218;11219 12943;12944;12945;12946;12947 12944 5 ELCEENLNPNAHPR Unmodified 1691.7686 0.76856686 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 4 0 1 41.824 41.824 3 0.0018095 12461 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.001 31.75 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 1765.1 4807 784 4634 11220 12948 12948 1 ELCSGPAR Unmodified 888.41235 0.41235077 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 9 4 1 1 32.869 32.869 2 0.0020039 7762 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.22 83.85 48.837 25.395 134.72 93.62 0 59.696 46 28 130 93 0 56 1 1 2 2 0 1 10645 4808 2583 4635 11221;11222 12949;12950 12949 2 ELDALDANDELTPLGR Unmodified 1740.853 0.853008 16 A0A087WPL5;E9QNN1;O70133 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 3 0.816 1 1 1 73.206 73.206 2 1.1834E-18 27346 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.53 72.059 0 9 0 0 0 9 0 9 0 0 0 9 0 1 0 0 0 1 2547.4 4809 16 4636 11223;11224;11225 12951;12952;12953 12952 3 ELDDATEANEGLSR Unmodified 1518.6798 0.67979466 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 1.5 0.5 1 1 47.997 47.997 2 2.0324E-129 15192 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 249.25 174.99 95.661 100.23 110.42 120.2 116.77 124.59 90 102 113 118 121 120 1 2 2 2 2 2 50624 4810 1974 4637 11226;11227 12954;12955 12955 2 ELDDELMR Unmodified 1019.4594 0.45936054 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 6 4.97 1 1 1 55.174 55.174 2 0.0080597 18707 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.83 58.521 534.24 411.77 390.91 376.92 339.28 401.79 502 427 386 372 347 386 3 3 2 3 2 2 161860 4811 1223 4638 11228;11229;11230 12956;12957;12958 12956 3 ELDDISLTPDPEPTHEDPNYLMANER Unmodified 3010.3502 0.3502106 3056 Q9D394 Rufy3 Protein RUFY3 yes yes 0 0 0 0 3 0 1 71.222 71.222 3 3.6965E-07 26449 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.321 40.797 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1387.6 4812 3056 4639 11231 12959 12959 1 ELDDISQEIAQLQR Unmodified 1656.8319 0.83187862 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 4 0.816 1 1 1 79.548 79.548 3 3.5442E-11 29889 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.7 100.04 40.774 0 0 30.604 0 70.356 38 0 0 28 0 66 2 0 0 2 0 2 8740.3 4813 2095 4640 11232;11233;11234 12960;12961;12962 12962 3 ELDDLEQWIQER Unmodified 1572.742 0.74200098 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0 1 83.388 83.388 3 6.7256E-05 31657 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.772 61.055 0 29.792 0 40.441 0 59.696 0 28 0 37 0 56 0 1 0 1 0 1 9212.1 4814 2186 4641 11235 12963 12963 1 ELDELKK Unmodified 873.48075 0.48074791 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 5 0 1 51.124 51.124 3 0.06516 16593 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.788 8.7925 158.21 117.01 0 139.58 133.33 164.62 148 120 0 130 139 158 1 1 0 1 1 1 9474.9 4815 2253 4642 11236 12964 12964 1 ELDENGDGEVDFK Deamidation (N) 1466.6049 0.60489838 2732 Q91V77;P56565 S100a1 Protein S100;Protein S100-A1 yes no 0 1 0 0 2.33 0.471 2 1 61.434 61.434 2;3 0.0056557 21570 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.569 37.494 39.365 58.605 59.887 0 48.852 9.0357 37 56 56 0 47 9 2 3 2 0 2 1 17599 4816 2732 4643 11237;11238;11239 12965;12966;12967;12968 12966 981 4 ELDESVLGQTGPYR Unmodified 1562.7577 0.75765105 1211 O35857 Timm44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 0 4 0 1 61.764 61.764 3 0.030893 21849 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.555 22.679 0 0 30.296 0 46.807 38.106 0 0 28 0 46 37 0 0 1 0 1 1 3328.7 4817 1211 4644 11240 12969 12969 1 ELDFTEEQIHQIR Unmodified 1656.8107 0.81074925 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 3 0 1 57.968 57.968 3 5.9138E-06 20290 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.65 70.129 69.373 27.776 39.013 27.755 27.862 29.053 65 28 37 28 28 28 2 1 1 2 1 1 7548.9 4818 3449;3451 4645 11241 12970;12971 12970 2 ELDLAPYGTLR Unmodified 1246.6558 0.65575216 2791 Q920N7 Syt12 Synaptotagmin-12 yes yes 0 0 0 0 6 0 1 67.137 67.137 3 0.013588 23398 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.004 12.044 0 0 19.685 19.594 0 9.594 0 0 19 19 0 9 0 0 1 1 0 1 1449 4819 2791 4646 11242 12972 12972 1 ELDLPEELVSR Unmodified 1298.6718 0.67179615 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 4 0.816 1 1 1 71.789 71.789 2;3 1.069E-08 26157 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.32 82.211 0 98.952 38.796 27.784 36.107 98.108 0 93 37 28 37 93 0 1 1 1 2 3 11922 4820 1925 4647 11243;11244;11245 12973;12974;12975 12974 3 ELDLYDNQIK Unmodified 1249.619 0.6190323 1995 Q3UM45;A0A087WRA7 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 0 5 0 1 64.718 64.718 3 0.00022005 22825 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.538 41.103 68.818 62.805 102.54 83.261 71.599 57.653 65 65 102 83 74 56 1 1 1 1 1 1 10341 4821 1995 4648 11246 12976 12976 1 ELDPVQK Unmodified 827.43888 0.43888309 1852 P97450;E9QAD6 Atp5j ATP synthase-coupling factor 6, mitochondrial yes no 0 0 0 0 10.7 3.3 1 2 48.809 48.809 2;3 0.0065981 15611 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.377 42.348 324.76 362.12 617.65 232.28 643.93 462.54 306 362 602 241 641 447 3 3 4 2 4 3 41080 4822 1852 4649 11247;11248;11249 12977;12978;12979;12980 12979 4 ELDQWIEQLNECK Unmodified 1703.7825 0.78248559 1787 P63330 Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes yes 0 0 0 0 6 0 1 83.364 83.364 3 1.399E-05 31006 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.76 73.218 29.93 38.603 64.831 68.072 68.857 74.787 28 37 65 67 69 72 1 1 2 2 1 2 10492 4823 1787 4650 11250 12981;12982 12981 2 ELDRNELFEK Unmodified 1291.6408 0.64083038 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 1 5 0 1 55.517 55.517 3 0.014607 18644 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.743 34.757 88.193 71.367 85.079 0 74.072 97.024 83 74 83 0 74 93 1 1 1 0 1 1 7879.6 4824 1653 4651 11251 12983 12983 1 ELDSGLAESVSTLIWAAPR Unmodified 2014.0371 0.037120373 2982 Q9CX00 Ist1 IST1 homolog yes yes 0 0 0 0 7.5 0.5 1 1 94.372 94.372 3 1.2334E-10 34854 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.88 92.529 0 0 9.5198 4.8976 19 0 0 0 9 5 19 0 0 0 1 1 1 0 4945.3 4825 2982 4652 11252;11253 12984;12985 12984 2 ELDSITPDITPGWK Unmodified 1570.7879 0.78788854 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7.75 3.11 1 1 1 1 76.714 76.714 3 1.7689E-07 27946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.31 82.327 247.9 65.13 119.66 169.76 222.54 134.06 232 65 111 158 223 129 4 1 2 2 3 3 35949 4826 2517 4653 11254;11255;11256;11257 12986;12987;12988;12989 12987 4 ELDSNPFASLVFYWEPLNR Unmodified 2296.1164 0.11643333 2765 Q91XF0 Pnpo Pyridoxine-5'-phosphate oxidase yes yes 0 0 0 0 8 0 1 105.6 105.6 3 3.1675E-07 36566 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.505 60.196 0 0 4.985 9.5399 0 0 0 0 5 9 0 0 0 0 1 1 0 0 1195.9 4827 2765 4654 11258 12990 12990 1 ELDTLNNEIVDLQR Unmodified 1670.8475 0.84752869 1006 F6W2Q5;Q5JC28;H3BK65;P42567 Eps15 Epidermal growth factor receptor substrate 15 yes no 0 0 0 0 4 0 1 72.018 72.018 3 7.9653E-05 26272 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.09 68.107 20.292 18.848 0 0 38.702 0 19 19 0 0 37 0 1 1 0 0 1 0 2101.3 4828 1006 4655 11259 12991 12991 1 ELEAAAPWEDPGALASSSDAPVVYLK Unmodified 2685.3174 0.31737756 2498 Q91WG7;Q8C413;F2Z409 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 0 5 0 1 88.357 88.357 4 0.021235 33722 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.918 15.304 0 40.432 0 30.604 0 9.594 0 38 0 28 0 9 0 1 0 1 0 1 2035 4829 2498 4656 11260 12992 12992 1 ELEAASAPEER Unmodified 1200.5622 0.5622457 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3;A2AMI7 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 1.5 0.5 1 1 40.468 40.468 2 6.8694E-13 12079 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 146.11 104.66 20.195 61.67 48.358 67.843 16.998 44.287 19 60 51 65 19 42 1 2 2 2 1 2 11082 4830 133 4657 11261;11262 12993;12994 12994 2 ELEAELEAQLVQAEQR Unmodified 1854.9323 0.93232095 3187 Q9ERR1 Ndel1 Nuclear distribution protein nudE-like 1 yes yes 0 0 0 0 3 0 1 79.936 79.936 3 0.016673 30203 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.977 25.072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4831 3187 4658 11263 12995 12995 1 ELEAELEDERK Unmodified 1359.6518 0.65178899 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 2 0 1 51.448 51.448 3 0.00077642 16808 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.014 44.31 29.36 45.69 76.205 46.141 36.582 0 28 46 75 47 37 0 1 1 1 1 1 0 3119.9 4832 1974 4659 11264 12996 12996 1 ELEAENYHDIK Unmodified 1359.6307 0.63065962 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 3.5 0.5 1 1 48.077 48.077 3 7.053E-06 15752 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.6 59.594 87.971 70.751 122.83 117.17 91.567 96.525 83 74 120 121 93 93 1 1 1 2 1 1 46098 4833 2148 4660 11265;11266 12997;12998 12997 2 ELEASEELDTICPK Unmodified 1632.7553 0.75526779 259 A0A1B0GS58;Q9CQM9;A0A1B0GT04 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 3.5 0.5 1 1 65.755 65.755 3 0.007571 23941 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.968 25.291 20.244 57.92 17.911 49.601 37.328 0 19 56 19 47 37 0 1 2 1 2 1 0 12585 4834 259 4661 11267;11268 12999;13000 12999 2 ELEAVCQDVLSLLDNYLIK Unmodified 2234.1504 0.15043557 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 9.29 2.43 2 2 1 2 117.63 117.63 3;4 7.1029E-54 38240 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 165.8 143.33 10.7 27.184 5.8319 26.921 24.851 9.4478 10 26 6 25 24 9 2 5 2 5 4 3 18024 4835 1706 4662 11269;11270;11271;11272;11273;11274;11275 13001;13002;13003;13004;13005;13006;13007;13008;13009 13001 9 ELEDGGLER Unmodified 1016.4775 0.47745344 837 E9PWK1;Q9D379;F6YTS6 Ephx1 Epoxide hydrolase 1 yes no 0 0 0 0 1 0 1 43.784 43.784 2 0.0028574 12473 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.143 31.036 60.088 0 0 0 38.702 0 56 0 0 0 37 0 1 0 0 0 1 0 5494.7 4836 837 4663 11276 13010 13010 1 ELEDKVIELHK Unmodified 1351.7347 0.73473076 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YCY8 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 6 0 1 58.082 58.082 4 0.0010686 19141 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.488 35.601 0 0 100.63 0 106.69 0 0 0 93 0 102 0 0 0 1 0 1 0 5999.8 4837 369;3345 4664 11277 13011 13011 1 ELEDLVR Unmodified 872.46035 0.46034682 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 7.33 4.03 1 1 1 57.606 57.606 2 0.022445 19942 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.21 20.111 0 108.53 186.89 128.11 216.57 454.33 0 102 178 130 225 432 0 1 1 1 2 3 68971 4838 2702 4665 11278;11279;11280 13012;13013;13014 13012 3 ELEEAVTSALQQETEK Unmodified 1803.8738 0.87380302 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 4 0 1 79.128 79.128 3 1.3804E-05 29592 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.662 57.269 20.091 0 49.671 0 0 29.848 19 0 46 0 0 28 1 0 1 0 0 1 1972.2 4839 581 4666 11281 13015 13015 1 ELEECQR Unmodified 962.41274 0.4127447 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 0 0 0 1 0 1 31.402 31.402 2 0.019296 7453 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.09 47.794 39.489 42.025 0 33.675 69.157 42.799 37 42 0 32 69 42 1 1 0 1 1 1 6615.3 4840 3332 4667 11282 13016 13016 1 ELEEDFIR Unmodified 1049.5029 0.50293991 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 0 4.6 4.32 1 1 1 1 1 60.394 60.394 2 3.2436E-10 21552 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 170.87 81.319 869.75 482.59 748.92 830.4 964.37 861.42 817 491 734 801 970 825 7 5 4 6 6 5 209760 4841 2931 4668 11283;11284;11285;11286;11287 13017;13018;13019;13020;13021;13022;13023 13020 7 ELEEELR Unmodified 916.45018 0.45017606 2039 Q58A65;Z4YMB8;A0A0R4J196;F8WH31;E9PUD1;F6SH61 Spag9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 0 1 0 1 47.317 47.317 2 0.062135 14078 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.324 10.037 59.701 34.748 35.548 47.136 54.414 58.143 56 37 37 46 56 56 1 1 1 1 1 1 6417.9 4842 2039 4669 11288 13024 13024 1 ELEEETNAFNCR Deamidation (N) 1511.6198 0.61983694 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 1 0 0 1.4 0.49 3 2 52.698 52.698 2;3 0.00060605 16220 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.332 68.227 128.67 17.545 39.253 17.538 92.762 97.841 120 19 37 19 92 93 2 1 1 1 2 2 9313.2 4843 575 4670 11289;11290;11291;11292;11293 13025;13026;13027;13028;13029 13026 166;167 5 ELEEETNAFNCR Unmodified 1510.6358 0.63582135 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 2.5 0.5 1 1 52.396 52.396 2;3 1.8575E-23 17285 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 170.02 145.17 0 0 29.504 17.776 65.554 66.165 0 0 28 19 65 65 0 0 1 1 1 2 25115 4844 575 4670 11294;11295 13030;13031 13030 2 ELEEEVSNFQK Unmodified 1350.6303 0.63032527 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept11 Septin-11 yes no 0 0 0 0 3.5 0.5 1 1 62.578 62.578 3 4.6696E-09 22415 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.08 70.026 49.358 0 0 69.472 83.627 0 46 0 0 65 83 0 1 0 0 1 1 0 17087 4845 112 4671 11296;11297 13032;13033 13032 2 ELEEEVSNFQK Deamidation (N) 1351.6143 0.61434085 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept11 Septin-11 yes no 0 1 0 0 3 0 1 62.669 62.669 2 0.033128 22464 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.719 29.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4846 112 4671 11298 13034 13034 48 1 ELEEEWVK Unmodified 1060.5077 0.50769094 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 4 0 1 62.591 62.591 3 0.047732 22151 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.808 15.081 0 20.216 0 0 0 39.442 0 19 0 0 0 37 0 1 0 0 0 1 1746.4 4847 178 4672 11299 13035 13035 1 ELEEIVQPIISK Unmodified 1396.7813 0.7813466 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 8.33 3.4 1 1 1 79.745 79.745 3 0.00021325 30045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.958 51.657 29.904 75.763 57.205 41.534 56.948 77.259 28 74 55 38 56 74 1 3 1 1 1 2 13696 4848 1419 4673 11300;11301;11302 13036;13037;13038 13036 3 ELEENEVIPK Unmodified 1198.6081 0.60813326 1218 O35988 Sdc4 Syndecan-4 yes yes 0 0 0 0 3 0 1 57.522 57.522 3 0.0013922 20080 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.977 45.591 39.564 27.124 0 40.441 0 49.036 37 28 0 37 0 46 1 1 0 1 0 1 2272.1 4849 1218 4674 11303 13039 13039 1 ELEEQLGPVAEETR Unmodified 1598.7788 0.77878042 1325 P08226;A0A1B0GX15;G3UWN5;G3UZM8 Apoe Apolipoprotein E yes no 0 0 0 0 5 5.1 2 2 1 2 58.371 58.371 2;3 1.5185E-24 18758 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 148.89 103.53 129.29 163.22 71.914 168.42 193.23 174.14 121 158 76 160 196 168 4 4 4 5 5 5 98458 4850 1325 4675 11304;11305;11306;11307;11308;11309;11310 13040;13041;13042;13043;13044;13045;13046;13047 13040 8 ELEEQTR Unmodified 903.42977 0.42977497 1453 P26043 Rdx Radixin yes yes 0 0 0 0 1.5 0.5 1 1 31.257 31.257 2 0.027671 7677 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.093 0 63.946 141.8 106.48 107.62 100.65 125.05 60 139 111 106 102 120 1 2 2 2 1 2 47755 4851 1453 4676 11311;11312 13048;13049 13049 2 ELEEWYAR Unmodified 1094.5033 0.50327426 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 4.5 0.5 1 1 59.123 59.123 2;3 0.00020658 20567 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.58 114.51 260.39 321.41 345.25 0 378.96 326.04 246 324 337 0 373 316 1 2 1 0 2 2 76916 4852 599;600 4677 11313;11314 13050;13051 13050 2 ELEEYRR Unmodified 993.48796 0.48795855 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 1 3 0 1 32.952 32.952 3 0.012071 8719 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.72 23.122 79.006 0 66.575 75.346 83.357 0 74 0 65 74 83 0 1 0 1 1 1 0 14719 4853 3276 4678 11315 13052 13052 1 ELEFYLR Unmodified 968.49673 0.49673232 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 6 0 1 67.487 67.487 2 0.026818 23561 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.262 36.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4854 1714 4679 11316 13053 13053 1 ELEGPVYEK Unmodified 1062.5233 0.523341 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 5 0 1 54.006 54.006 3 0.026695 17886 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.606 20.487 29.577 36.581 47.428 0 38.702 0 28 37 46 0 37 0 1 1 1 0 1 0 2885.7 4855 965 4680 11317 13054 13054 1 ELEGVITK Unmodified 887.4964 0.49639797 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 6 0 1 57.584 57.584 2 0.011796 18939 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.594 12.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4856 3387 4681 11318 13055 13055 1 ELELVQNAFFTDPNDQSAWFYHR Unmodified 2826.3038 0.30379318 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 6 0 1 87.637 87.637 4 0.0068386 32921 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.909 14.187 0 19.914 18.048 29.528 0 0 0 19 19 28 0 0 0 1 1 1 0 0 1480.3 4857 3203 4682 11319 13056 13056 1 ELENFFQELEK Unmodified 1424.6824 0.68236084 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 7.75 3.11 1 1 1 1 86.875 86.875 2;3 1.6905E-09 34103 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.13 88.762 187.96 153.8 199.54 191.4 423.1 87.67 177 158 195 185 410 84 5 4 4 5 4 2 23235 4858 1892 4683 11320;11321;11322;11323 13057;13058;13059;13060;13061;13062;13063 13063 7 ELENNIR Unmodified 886.45084 0.45084476 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 3 0 1 38.213 38.213 2 0.00023333 11229 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.52 43.338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4859 1388 4684 11324 13064 13064 1 ELEQFTK Unmodified 893.44945 0.44944778 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 0 7.75 3.11 1 1 1 1 54.928 54.928 2 0.022255 18416 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 52.583 395.13 482.51 539.34 513.38 296.16 559.73 373 487 538 496 317 533 3 4 3 3 3 4 63024 4860 3151 4685 11325;11326;11327;11328 13065;13066;13067;13068 13068 4 ELEQIFCQFDSK Unmodified 1542.7024 0.70244436 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 84.409 84.409 3 0.0010514 30693 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.401 32.752 29.749 0 49.622 0 56.948 47.411 28 0 46 0 56 46 1 0 1 0 1 1 5182.2 4861 2074 4686 11329 13069 13069 1 ELETGPK Unmodified 772.39668 0.39668393 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 4 0 1 42.226 42.226 2 0.019877 12550 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.32 55.745 49.026 65.854 0 99.632 107.24 124.86 46 65 0 93 111 120 1 1 0 1 1 1 6083.5 4862 2075 4687 11330 13070 13070 1 ELETPSEEK Unmodified 1060.4924 0.49243481 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 3 0.816 1 1 1 45.315 45.315 2 2.8922E-05 13917 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.7 58.96 107.96 176.63 200.53 209.57 0 192.95 102 176 199 199 0 181 2 4 3 4 0 5 66998 4863 2125 4688 11331;11332;11333 13071;13072;13073;13074;13075 13075 5 ELETVCNDVLALLDK Deamidation (N) 1731.8601 0.86006721 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 1 0 0 5 0.816 1 1 1 89.529 89.529 3 9.1931E-05 33677 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.296 44.664 0 9.576 5.41 20.234 28.359 9.594 0 9 5 19 28 9 0 1 1 1 1 1 2973.2 4864 1797 4689 11334;11335;11336 13076;13077;13078 13076 732 3 ELETVCNDVLALLDK Unmodified 1730.8761 0.87605162 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 8.67 3.2 1 1 1 1 2 99.075 99.075 2;3 3.5544E-23 36955 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.1 105.01 133.01 114.81 108.6 144.36 22.226 127.66 125 113 103 136 22 120 5 4 4 3 2 4 69476 4865 1797 4689 11337;11338;11339;11340;11341;11342 13079;13080;13081;13082;13083;13084;13085;13086 13080 8 ELEVAESDGQVELER Unmodified 1701.8057 0.80572345 2107 Q61081;A0A1L1STC0 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes no 0 0 0 0 1.75 0.829 2 1 1 59.328 59.328 2;3 7.7814E-06 21001 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.94 78.504 29.807 115.16 56.107 56.273 103.15 58.377 28 111 56 56 103 56 1 4 2 3 4 2 58325 4866 2107 4690 11343;11344;11345;11346 13087;13088;13089;13090 13090 4 ELEVEVHR Unmodified 1009.5193 0.51925868 1087 G3X9N3 Pnmal2 yes yes 0 0 0 0 3 0 1 40.611 40.611 3 0.0061985 12347 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.379 35.194 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2377.7 4867 1087 4691 11347 13091 13091 1 ELEVQHPAAK Unmodified 1120.5877 0.58767259 1543 P42932;H3BL49;H3BLL1;H3BKG2 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7.33 4.03 1 1 1 39.907 39.907 3 0.0019532 11624 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.595 39.923 88.59 259.39 267.34 369.42 548.08 350 83 251 269 362 549 343 1 2 2 3 2 2 45776 4868 1543 4692 11348;11349;11350 13092;13093;13094 13092 3 ELFEADPER Unmodified 1104.5088 0.50875357 1316 P06745;A0A0U1RP97;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 5.5 4.39 1 1 1 1 54.403 54.403 2 1.5353E-05 18377 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.72 89.012 659.29 643.64 625.34 710.41 537.86 948.03 620 647 612 684 558 902 4 5 3 5 5 5 336680 4869 1316 4693 11351;11352;11353;11354 13095;13096;13097;13098;13099;13100 13098 6 ELFEPYGAVYQINVLR Unmodified 1909.9938 0.993799 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2L5;S4R2J2;A3KGT0 Celf2 CUGBP Elav-like family member 2 yes no 0 0 0 0 10 3 1 1 85.22 85.22 3 1.7707E-05 33281 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.578 58.303 69.157 63.749 44.747 67.557 43.63 68.045 65 65 46 65 46 65 2 2 1 2 1 1 11184 4870 220 4694 11355;11356 13101;13102 13102 2 ELFFPETAHEA Unmodified 1289.5928 0.59281755 1200 O35621;Q91W01 Pmm1 Phosphomannomutase 1;Phosphomannomutase yes no 0 0 0 0 5 0 1 66.221 66.221 2 0.00046836 23548 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.302 76.866 80.175 0 50.45 0 58.576 0 75 0 47 0 56 0 2 0 2 0 2 0 5456.4 4871 1200 4695 11357 13103;13104 13103 2 ELFLGNIEQK Unmodified 1189.6343 0.63428844 2567 Q8JZN5;A0A0G2JDY4 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 0 7 0 1 70.27 70.27 3 0.0029526 24100 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.283 34.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4872 2567 4696 11358 13105 13105 1 ELFNSIIPLFGPYPSLLK Unmodified 2047.1394 0.1394006 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 12.5 0.5 1 1 107.99 107.99 3 4.7249E-07 29599 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.453 72.089 0 9.4295 20.458 13.833 13.253 22.008 0 9 20 14 14 21 0 1 2 2 2 2 4154.8 4873 343 4697 11359;11360 13106;13107 13106 2 ELFQELLNLEK Unmodified 1374.7395 0.73948179 2055 Q5PR73 Diras2 GTP-binding protein Di-Ras2 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 92.658 92.658 3 7.5806E-05 34409 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.018 44.005 20.207 49.552 78.027 28.313 103.38 78.94 19 47 75 28 102 75 1 2 3 1 3 2 12502 4874 2055 4698 11361;11362;11363;11364 13108;13109;13110;13111 13108 4 ELFSPLHALNFGIGGDTTR Unmodified 2044.0378 0.037789075 313 A0A1L1SVK0;Q61206;A0A1L1SQ76;A0A1L1SRD0 Pafah1b2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 0 0 0 10 0.816 1 1 1 80.378 80.378 3 1.4945E-46 27529 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 155.28 138.6 0 135.13 190.88 71.202 343.02 333.24 0 130 185 70 342 320 0 2 2 2 3 2 79817 4875 313 4699 11365;11366;11367 13112;13113;13114 13112 3 ELGCSSVK Unmodified 878.41677 0.41676744 2595 Q8K274 Fn3krp Ketosamine-3-kinase yes yes 0 0 0 0 6 0 1 43.464 43.464 2 0.028442 12183 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.248 1.2275 79.032 73.407 0 79.367 80.542 76.586 74 74 0 74 83 74 1 1 0 1 1 1 13603 4876 2595 4700 11368 13115 13115 1 ELGDDCNFGPALGEVGEAMR Unmodified 2135.9252 0.92520344 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 5.4 3.93 1 1 1 1 1 75.733 75.733 3 5.6383E-17 28116 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.38 101.91 80.015 9.2558 105.29 115.35 109.3 92.682 75 9 102 113 111 90 2 1 3 4 3 3 50244 4877 491 4701 11369;11370;11371;11372;11373 13116;13117;13118;13119;13120;13121 13119 6 ELGDDSLPSSQFLDGMNYLR Unmodified 2256.0369 0.036862376 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 9 4 1 1 86.055 86.055 3 1.0987E-08 33757 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.301 66.342 0 19.892 46.568 69.424 29.288 0 0 19 47 65 28 0 0 1 2 1 1 0 11914 4878 3449;3451;3452 4702 11374;11375 13122;13123 13123 2 ELGDHVTNLR Unmodified 1152.5887 0.58873523 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 0 5 0 1 40.803 40.803 3 0.0015256 11522 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.786 43.184 59.302 54.143 86.259 0 104.41 66.31 56 56 83 0 102 65 1 1 1 0 1 1 6729.6 4879 1335 4703 11376 13124 13124 1 ELGDVLFQMAEVHR Unmodified 1642.8137 0.81372614 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8.5 2.69 1 1 1 1 78.828 78.828 3 3.2742E-05 28119 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.534 61.459 29.602 76.156 83.077 85.249 74.723 58.351 28 74 83 83 74 56 1 2 2 2 2 2 17384 4880 607 4704 11377;11378;11379;11380 13125;13126;13127;13128 13126 4 ELGEGAFGK Unmodified 906.4447 0.44469675 1384;61 A0A0A6YWL7;A0A0A6YWF9;Q6VNS1;P15209 Ntrk3;Ntrk2 Tyrosine-protein kinase receptor;NT-3 growth factor receptor;BDNF/NT-3 growth factors receptor no no 0 0 0 0 6 0 1 55.957 55.957 2 0.018635 18163 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.27 33.915 78.461 52.392 113.74 63.263 53.343 67.768 74 56 111 65 56 65 1 1 1 1 1 1 3387.8 4881 61;1384 4705 11381 13129 13129 1 ELGEGEETELASPEDLLSAPPALSK Unmodified 2581.2647 0.26467329 2202 Q6NS82;A0A087WPR9 Fam134a Protein FAM134A yes no 0 0 0 0 4 0 2 84.341 84.341 3;4 2.2402E-11 32063 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.68 62.067 9 0 20.558 0 0 20.254 9 0 19 0 0 19 1 0 1 0 0 1 1962.5 4882 2202 4706 11382;11383 13130;13131 13131 2 ELGEHGLYEYTELK Unmodified 1679.8043 0.80426689 1447 P24549;O35945 Aldh1a1;Aldh1a7 Retinal dehydrogenase 1;Aldehyde dehydrogenase, cytosolic 1 yes no 0 0 0 0 5 0 1 62.898 62.898 3 1.0641E-21 22046 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.99 105.16 0 38.738 37.71 0 37.714 28.772 0 37 37 0 37 28 0 1 1 0 1 1 4958.4 4883 1447 4707 11384 13132 13132 1 ELGEYGLQAYTEVK Unmodified 1598.7828 0.78280317 1562 P47738;A0A0G2JF60;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 70.827 70.827 3 1.6164E-05 25783 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.83 73.006 157.43 81.996 160.88 98.034 74.438 146.05 148 83 158 93 74 139 2 1 2 1 1 2 18350 4884 1562 4708 11385;11386 13133;13134 13133 2 ELGFQGK Unmodified 777.4021 0.40210366 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7 0 1 51.892 51.892 2 0.021687 15407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.12 105.12 194.67 261.6 241.99 241.34 0 353.91 184 262 249 234 0 332 1 1 1 1 0 1 24822 4885 510 4709 11387 13135 13135 1 ELGGEVFYVGPAR Unmodified 1392.7038 0.70376498 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 8 3.56 1 1 1 66.945 66.945 2;3 4.8651E-23 24346 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.65 122.32 141.17 66.104 202.55 84.348 153.77 100.16 133 68 195 83 154 96 3 2 3 2 3 2 47014 4886 144 4710 11388;11389;11390 13136;13137;13138 13138 3 ELGGIPIVGNK Unmodified 1095.6288 0.62880913 3029 Q9D0L7;D3Z5T2 Armc10 Armadillo repeat-containing protein 10 yes no 0 0 0 0 7.5 0.5 1 1 67.765 67.765 2 0.0028033 22236 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.827 42.079 59.808 55.551 19.268 28.949 26.96 68.521 56 56 19 28 28 65 1 1 1 1 1 2 4046.1 4887 3029 4711 11391;11392 13139;13140 13140 2 ELGGLGEDANAEEEEGVQK Unmodified 1972.8862 0.88615862 3104 Q9DAU1 Cnpy3 Protein canopy homolog 3 yes yes 0 0 0 0 2 0 1 59.047 59.047 3 2.8654E-08 20277 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.975 63.486 20.244 28.427 0 0 18.538 38.913 19 28 0 0 19 37 1 1 0 0 1 1 2687.9 4888 3104 4712 11393 13141 13141 1 ELGHPEIGDAIAR Unmodified 1376.7048 0.70482762 2789 Q920E5;A0A0G2JEA5;A0A0G2JDJ5;A0A0G2JEB3 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 7.33 4.03 1 1 1 48.644 48.644 3 0.0018887 15717 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.139 28.81 69.389 26.513 37.419 158.7 44.204 185.29 65 28 37 148 46 175 2 1 1 3 1 3 20832 4889 2789 4713 11394;11395;11396 13142;13143;13144 13142 3 ELGIAGLYLHSK Unmodified 1299.7187 0.71868677 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 9 1 1 1 66.346 66.346 3 0.00012028 21561 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.314 41.774 48.883 0 79.822 0 94.991 66.579 46 0 74 0 93 65 1 0 1 0 1 1 9288.1 4890 860 4714 11397;11398 13145;13146 13145 2 ELGITALHIK Unmodified 1093.6495 0.64954457 1716 P62264;D3YVF4;D3Z7I1 Rps14 40S ribosomal protein S14 yes no 0 0 0 0 8.5 0.5 1 1 62.222 62.222 3 0.0005063 19629 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.29 33.341 148.42 42.953 86.571 166.39 61.054 67.548 139 46 83 158 65 65 2 1 1 2 1 1 16019 4891 1716 4715 11399;11400 13147;13148 13147 2 ELGIWEPLAVK Unmodified 1253.702 0.70197407 1827 P80318;E9Q133;Q3U0I3;F6ZVG8 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 8.5 2.69 1 1 1 1 81.548 81.548 2;3 3.4364E-13 31436 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.08 98.221 178.13 36.703 146.71 70.536 142.47 136.95 167 37 139 74 139 130 4 1 2 2 2 3 23686 4892 1827 4716 11401;11402;11403;11404 13149;13150;13151;13152 13152 4 ELGLETYK Unmodified 951.49131 0.49131259 2467 Q8BW75;E9Q3X6;E9PVL9 Maob Amine oxidase [flavin-containing] B yes no 0 0 0 0 5 0 1 57.819 57.819 2 0.035467 19710 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4893 2467 4717 11405 13153 13153 1 ELGLNPEK Unmodified 898.476 0.47599688 2518 Q8CAY6;G3XA25;Q80X81 Acat2;Acat3 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 0 5.5 0.5 1 1 52.77 52.77 2 0.018839 17287 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.934 27.968 88.266 55.518 86.279 60.399 110.99 68.063 83 56 83 56 111 65 2 1 1 1 2 1 13295 4894 2518 4718 11406;11407 13154;13155 13154 2 ELGLVDGQELAVADVTTPQTVLFK Unmodified 2542.353 0.35303478 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 6 0 1 92.096 92.096 3 0.0022313 34908 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.223 30.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 904.73 4895 1929 4719 11408 13156 13156 1 ELGNDAYK Unmodified 908.42396 0.42396131 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 5 0 2 45.627 45.627 2;3 0.0031567 13835 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.426 52.616 78.638 102.53 121.62 107.38 86.533 59.696 74 102 120 102 84 56 2 2 2 2 1 1 13453 4896 2092 4720 11409;11410 13157;13158;13159 13158 3 ELGPYSSK Unmodified 879.4338 0.43379771 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 6 0 1 48.084 48.084 2 0.014581 14441 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.161 10.906 0 59.584 0 0 93.636 106.06 0 56 0 0 93 102 0 1 0 0 1 1 5071.6 4897 1155 4721 11411 13160 13160 1 ELGSLDNVR Unmodified 1001.5142 0.5141733 2992 Q9CY64;A2ASB8;A2ASB7;A2ASB1 Blvra Biliverdin reductase A yes no 0 0 0 0 4 0 1 50.18 50.18 2 0.054607 16417 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.982 4.9414 29.904 27.776 0 0 66.005 57.813 28 28 0 0 65 56 1 1 0 0 1 1 3538.4 4898 2992 4722 11412 13161 13161 1 ELGSLPLPLSASEQR Unmodified 1595.8519 0.85188578 3177 Q9ER00 Stx12 Syntaxin-12 yes yes 0 0 0 0 6 0 1 72.756 72.756 2 0.0053346 26154 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.04 11.412 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 2148.4 4899 3177 4723 11413 13162 13162 1 ELGTVMR Unmodified 804.41637 0.41637351 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;P20801 Calm1;Tnnc2 Troponin C, skeletal muscle yes no 0 0 0 0 7.75 3.11 1 1 1 1 45.526 45.526 2 0.0038881 13935 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.98 63.924 3078.3 1747.3 3899.9 3070.4 3147 3733.9 2896 1860 3842 3076 3266 3587 3 3 4 4 4 4 822390 4900 1340 4724 11414;11415;11416;11417 13163;13164;13165;13166 13163 4 ELGVGLALR Unmodified 926.55492 0.5549159 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 8 0 1 63.095 63.095 2 0.0043918 20002 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.953 18.532 108.07 68.564 172.55 78.203 118.64 95.753 102 74 167 83 120 93 1 1 1 1 1 1 12304 4901 1887 4725 11418 13167 13167 1 ELGYPQEDDEEDEDEEEDEEEDSQAEVLK Unmodified 3441.3387 0.33869826 2088 Q60829 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B yes yes 0 0 0 0 1.5 0.5 1 1 68.198 68.198 4 0.0002373 23020 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.89 36.289 0 40.432 5.1803 34.525 94.968 42.898 0 38 5 33 93 42 0 2 1 2 2 2 15761 4902 2088 4726 11419;11420 13168;13169;13170 13168 3 ELHDPHYFSPIGFPHKR Unmodified 2076.033 0.032978469 1890 Q06890;E9PUU2;E9PXG5;E9Q8Y5 Clu Clusterin;Clusterin beta chain;Clusterin alpha chain yes no 0 0 0 1 5 0 1 103.79 103.79 3 0.028859 36191 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.143 2.6979 11.711 8.6513 8.0779 0 14.644 0 11 9 8 0 14 0 1 1 1 0 1 0 2892.8 4903 1890 4727 11421 13171 13171 1 ELHDVDLAEVKPLVEK Unmodified 1832.9884 0.98837927 2159 Q62433;E9Q0J8;E9PZC7;E9Q7G8;E9Q147;E9Q7V2;E9Q514;E9Q5I8;E9Q3F9;E9PVF3 Ndrg1 Protein NDRG1 yes no 0 0 0 1 6 0.816 1 1 1 67.24 67.24 4 0.0052094 23347 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.083 29.928 137.92 112.65 128.94 149.69 233.12 231.07 129 111 129 148 232 223 2 2 2 3 2 3 21294 4904 2159 4728 11422;11423;11424 13172;13173;13174 13173 3 ELHGEFK Unmodified 858.42357 0.42356738 451 P35803;A2AEG6 Gpm6b Neuronal membrane glycoprotein M6-b no no 0 0 0 0 8 3.56 1 1 1 41.483 41.483 3 0.0052866 12157 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.114 29.547 1274.6 1120.6 1454.9 850.37 966.82 1028 1200 1150 1421 826 970 979 5 5 5 4 4 4 79572 4905 451 4729 11425;11426;11427 13175;13176;13177;13178;13179;13180 13175 6 ELHINLIPSK Unmodified 1162.671 0.67100829 1322 P07901;B7ZC50;A2A6A2;B7ZC49 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 8 0.816 1 1 1 63.082 63.082 2;3 0.00011404 19328 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.34 67.462 384.58 425.99 279.45 161.25 538.16 539.79 361 426 278 157 538 519 4 4 3 2 4 4 115960 4906 1322 4730 11428;11429;11430 13181;13182;13183;13184;13185 13185 5 ELHINLIPSKQDR Unmodified 1561.8576 0.85763986 1322 P07901;B7ZC50;A2A6A2;B7ZC49 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 0 0 1 9 0 1 55.319 55.319 4 0.0035568 15625 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.754 28.107 108.13 98.953 136.59 164.55 0 118.33 102 102 139 158 0 111 1 1 1 1 0 1 8162.5 4907 1322 4731 11431 13186 13186 1 ELHIQGNR Unmodified 965.50428 0.50427732 527 A2AUR7;Q9D031;Q01730 Rsu1 Ras suppressor protein 1 yes no 0 0 0 0 5 0 1 32.334 32.334 3 0.021071 7442 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.166 24.654 0 0 29.48 18.31 37.202 19.192 0 0 28 19 37 19 0 0 1 1 1 1 1848.3 4908 527 4732 11432 13187 13187 1 ELHQDGR Unmodified 853.40423 0.40422892 1821 P70699;F6VEG4;A2AFL5 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 7.5 5.5 1 1 20.834 20.834 3 0.018218 3087 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.799 50.244 9.657 0 0 6.3334 35.329 28.84 9 0 0 6 35 28 1 0 0 1 2 2 3764.1 4909 1821 4733 11433;11434 13188;13189 13189 2 ELHSILQHK Unmodified 1103.6087 0.60874239 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 8 0 1 44.16 44.16 4 0.00052918 11118 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.439 59.177 0 69.16 0 50.278 0 78.884 0 65 0 46 0 74 0 1 0 1 0 1 8112.6 4910 1368 4734 11435 13190 13190 1 ELICVPYMAK Unmodified 1222.609 0.60900166 3450;8 A0A087WNU5;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5 Ank3 Ankyrin-3 no no 0 0 0 0 8 0 1 71.443 71.443 3 0.0083768 23991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.683 0 0 29.152 38.285 0 46.807 38.106 0 28 37 0 46 37 0 1 1 0 1 1 5606.2 4911 8;3450 4735 11436 13191 13191 1 ELIDDIER Unmodified 1001.5029 0.50293991 1172 O08967;H3BK81 Cyth3 Cytohesin-3 yes no 0 0 0 0 2.5 0.5 1 1 59.229 59.229 2 0.012022 20903 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.069 35.957 74.719 44.501 28.051 23.467 36.688 58.649 70 47 28 23 37 56 2 2 1 1 1 1 6420.2 4912 1172 4736 11437;11438 13192;13193 13193 2 ELIEIISGAAAL Unmodified 1198.6809 0.68090428 484 A2AKU9 Atp5c1 ATP synthase subunit gamma yes yes 0 0 0 0 8 0 1 105.75 105.75 2 0.0019743 36575 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.897 47.027 5.3293 7.0887 0 5.465 0 9.594 5 7 0 5 0 9 1 1 0 1 0 1 815.35 4913 484 4737 11439 13194 13194 1 ELIEIISGAAALD Unmodified 1313.7078 0.70784731 2493 Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial yes no 0 0 0 0 8.67 3.2 1 1 1 1 2 104.2 104.2 2;3 1.4612E-10 37711 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.89 95.653 44.883 48.107 63.674 57.368 77.462 79.655 42 46 61 55 77 77 7 7 6 7 8 10 73616 4914 2493 4738 11440;11441;11442;11443;11444;11445 13195;13196;13197;13198;13199;13200;13201;13202;13203;13204;13205;13206;13207;13208;13209;13210;13211 13196 17 ELIEQLQNKPSDLGTK Unmodified 1811.9629 0.9628928 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 1 8 0.816 1 1 1 65.123 65.123 3;4 4.0511E-05 20938 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.656 61.565 164.38 134.63 123.94 137.09 147.65 133.3 158 130 121 130 148 129 3 2 2 2 2 2 33834 4915 2092 4739 11446;11447;11448 13212;13213;13214;13215 13214 4 ELIFEETAR Unmodified 1106.5608 0.56078914 1769 P63085;A0A338P736;A0A338P781 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 7 3.54 1 1 1 1 60.393 60.393 2 0.0012861 21324 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.87 54.059 370.71 205.99 98.448 250.06 343.08 274.83 347 213 97 232 348 265 4 2 1 2 4 2 60636 4916 1769 4740 11449;11450;11451;11452 13216;13217;13218;13219 13216 4 ELIFSAR Unmodified 834.45995 0.45995289 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 7 0 1 57.431 57.431 2 0.026295 18030 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.006 11.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4917 150 4741 11453 13220 13220 1 ELIGEAAGK Unmodified 886.476 0.47599688 803 E0CY49;Q91YI0 Asl Argininosuccinate lyase yes no 0 0 0 0 6 0 1 52.265 52.265 3 0.043607 16408 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.158 15.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4918 803 4742 11454 13221 13221 1 ELIIGDR Unmodified 814.45487 0.45486751 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7 3.16 1 1 1 1 1 51.771 51.771 2 0.013733 16920 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.46 35.52 3290 2724.2 3254.8 2633.6 3369.3 3661.5 3097 2820 3283 2645 3457 3525 5 5 5 5 5 5 699160 4919 1881 4743 11455;11456;11457;11458;11459 13222;13223;13224;13225;13226 13223 5 ELIKPPTILR Unmodified 1178.7387 0.73869393 2650;3228 Q8R2R9;D3YWU3;D3YXV9;Q9JKC8 Ap3m2;Ap3m1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 0 1 9 0 1 60.262 60.262 3 0.018317 17988 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.149 40.579 260.72 235.22 344.22 257.73 257.58 317.78 246 243 343 259 268 305 1 1 1 1 1 1 13910 4920 2650;3228 4744 11460 13227 13227 1 ELILAGK Unmodified 742.45889 0.45889025 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 8 0 1 59.861 59.861 2 0.038508 18558 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.597 41.359 89.059 0 0 109.02 130.97 0 83 0 0 102 130 0 1 0 0 1 1 0 4627.4 4921 2520 4745 11461 13228 13228 1 ELINNELSHFLEEIK Unmodified 1826.9414 0.94142907 1591 P50114 S100b Protein S100-B yes yes 0 0 0 0 6 0 1 89.659 89.659 3 0.012002 33837 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.412 24.334 19.314 0 0 9.837 0 0 18 0 0 9 0 0 1 0 0 1 0 0 1212.9 4922 1591 4746 11462 13229 13229 1 ELINNELSHFLEEIKEQEVVDK Unmodified 2654.3439 0.34392666 1591 P50114 S100b Protein S100-B yes yes 0 0 0 1 9.5 3.5 1 1 90.482 90.482 4 0.0015256 35770 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.454 25.238 59.76 65.13 49.215 36.792 86.174 0 56 65 47 37 84 0 1 1 1 1 2 0 10217 4923 1591 4747 11463;11464 13230;13231 13231 2 ELIPNIPFQMLLR Unmodified 1582.8905 0.8905199 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 11.5 1.5 1 1 95.881 95.881 2;3 0.0065037 31288 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.659 24.808 20.387 0 0 0 0 29.848 19 0 0 0 0 28 1 0 0 0 0 1 11148 4924 974 4748 11465;11466 13232;13233 13232 2 ELIQTSALNFLTPLR Unmodified 1714.9618 0.96177059 3225 Q9JK48;A0A0G2JEC4 Sh3glb1 Endophilin-B1 yes no 0 0 0 0 9.5 0.5 1 1 88.959 88.959 3 0.0040349 31435 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.926 29.983 0 37 0 19.317 18.987 0 0 37 0 18 19 0 0 1 0 1 1 0 11079 4925 3225 4749 11467;11468 13234;13235 13234 2 ELISNASDALDK Unmodified 1274.6354 0.63541065 1354;1324 P08113;P11499;E9PX27;D3Z1R1 Hsp90b1;Hsp90ab1 Endoplasmin;Heat shock protein HSP 90-beta no no 0 0 0 0 7.75 3.11 1 1 1 1 62.732 62.732 2;3 4.749E-15 22282 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.56 60.781 610.65 495.6 504.69 672.39 714.65 342.6 574 508 514 655 724 334 3 3 2 4 4 2 164190 4926 1324;1354 4750 11469;11470;11471;11472 13236;13237;13238;13239 13239 4 ELISNASDALDK Deamidation (N) 1275.6194 0.61942623 1354;1324 P08113;P11499;E9PX27;D3Z1R1 Hsp90b1;Hsp90ab1 Endoplasmin;Heat shock protein HSP 90-beta no no 0 1 0 0 5 0 1 66.192 66.192 3 8.4042E-05 23564 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.62 51.004 39.34 26.5 38.246 0 36.688 58.649 37 28 37 0 37 56 1 1 1 0 1 1 4447.5 4927 1324;1354 4750 11473 13240 13240 395 1 ELISNASDALDKIR Unmodified 1543.8206 0.82058566 1354;1324 P08113;P11499;E9PX27;D3Z1R1 Hsp90b1;Hsp90ab1 Endoplasmin;Heat shock protein HSP 90-beta no no 0 0 0 1 9.33 2.62 1 1 1 66.268 66.268 3 4.4358E-21 22254 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.91 100.47 196.81 306.97 319.82 219.81 323.31 434.23 185 306 315 213 333 416 2 3 2 2 3 3 32297 4928 1324;1354 4751 11474;11475;11476 13241;13242;13243 13241 3 ELISNSSDALDK Unmodified 1290.6303 0.63032527 1322 P07901;B7ZC50;A2A6A2;B7ZC49 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 6.4 3.38 2 1 1 1 58.607 58.607 2;3 1.1885E-59 19883 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 207.95 123.45 425.99 227.01 166.72 287.15 554.12 354.37 399 231 166 277 554 343 5 3 2 4 5 4 156140 4929 1322 4752 11477;11478;11479;11480;11481 13244;13245;13246;13247;13248 13248 5 ELISNSSDALDK Deamidation (N) 1291.6143 0.61434085 1322 P07901;B7ZC50;A2A6A2;B7ZC49 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 1 0 0 4.5 0.5 1 1 61.371 61.371 3 0.0016591 21543 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.495 38.014 59.862 44.908 0 60.018 63.245 76.891 56 46 0 56 65 75 1 1 0 1 1 2 7262 4930 1322 4752 11482;11483 13249;13250 13250 392 2 ELISNSSDALDKIR Unmodified 1559.8155 0.81550028 1322 P07901;B7ZC50;A2A6A2;B7ZC49 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 0 0 1 7 0 1 60.126 60.126 3 0.0003807 19344 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.243 68.234 128.3 90.3 0 129.35 96.452 125.17 120 93 0 120 102 120 1 1 0 1 1 1 7401.9 4931 1322 4753 11484 13251 13251 1 ELISQFLLNR Unmodified 1231.6925 0.69247202 1871 Q00897 Serpina1d Alpha-1-antitrypsin 1-4 yes yes 0 0 0 0 11 0 2 80.244 80.244 2;3 5.5579E-05 24701 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.807 49.567 0 0 0 0 65.675 67.416 0 0 0 0 65 65 0 0 0 0 1 1 16515 4932 1871 4754 11485;11486 13252;13253 13253 2 ELIVDAEDTWIR Unmodified 1458.7355 0.73545904 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6.2 3.43 2 2 1 78.951 78.951 2;3 7.0458E-27 29472 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 176.95 129.76 48.784 146.68 79.87 109.93 148.73 57.813 46 139 74 102 148 56 2 5 1 3 4 2 57147 4933 2479 4755 11487;11488;11489;11490;11491 13254;13255;13256;13257;13258;13259 13255 6 ELKDLLQTELSGFLDVQK Unmodified 2075.115 0.11503634 2732 Q91V77;P56565 S100a1 Protein S100;Protein S100-A1 yes no 0 0 0 1 8 0 1 99.724 99.724 4 0.028291 35557 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.094 20.222 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 846.23 4934 2732 4756 11492 13260 13260 1 ELKEENEEK Unmodified 1146.5404 0.54044763 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 1 4 0 1 40.121 40.121 3 0.045736 11605 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.762 13.676 0 96.698 134.86 0 0 0 0 93 130 0 0 0 0 1 1 0 0 0 6579.4 4935 347 4757 11493 13261 13261 1 ELKPEQETTPR Unmodified 1326.6779 0.67794416 526 A2AUK5;Q9Z2H5;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 13 0 1 37.397 37.397 3 0.012401 10175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.551 27.223 108.22 148.83 80.331 0 0 108.73 102 148 83 0 0 102 1 1 1 0 0 1 8934.9 4936 526 4758 11494 13262 13262 1 ELLAFLSEPEILAK Unmodified 1571.8811 0.88106065 2446 Q8BR90 UPF0600 protein C5orf51 homolog yes yes 0 0 0 0 8 0 1 97.047 97.047 3 3.2531E-05 34943 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.486 59.755 0 14.896 0 15.049 13.453 14.54 0 14 0 14 14 14 0 1 0 1 1 1 2170.8 4937 2446 4759 11495 13263 13263 1 ELLALEVFQVSHPR Unmodified 1636.8937 0.89369102 338 Q9WVL0;A0A1Y7VJZ2;A0A1Y7VNC1 Gstz1 Maleylacetoacetate isomerase yes no 0 0 0 0 8 0 1 76.533 76.533 3 0.033068 26342 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.993 16.531 39.307 36.123 35.562 47.294 45.943 0 37 37 37 46 46 0 1 1 1 1 1 0 4684.1 4938 338 4760 11496 13264 13264 1 ELLAVACEQFLGK Unmodified 1476.7647 0.76465068 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 9 0 2 84.473 84.473 2;3 2.7439E-08 29366 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.108 34.541 49.358 0 0 0 0 78.884 46 0 0 0 0 74 1 0 0 0 0 1 3887.1 4939 2059 4761 11497;11498 13265;13266 13266 2 ELLAVPNNYK Unmodified 1159.6237 0.62372375 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 7.5 0.5 1 1 63.323 63.323 2;3 0.00033288 20801 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.247 53.833 128.85 108.2 73.006 114.91 109.55 67.771 121 111 74 111 112 65 2 2 1 2 2 1 17094 4940 2840 4762 11499;11500 13267;13268 13267 2 ELLDVGNIGHLEQR Unmodified 1591.8318 0.83181904 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8 3.56 1 1 1 64.225 64.225 3 0.0004703 22999 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.387 43.151 167.98 163.25 122.58 113.58 232.21 152.81 158 166 120 111 232 148 3 3 2 2 3 2 29973 4941 3373 4763 11501;11502;11503 13269;13270;13271 13271 3 ELLESFDSALQSVK Unmodified 1564.7985 0.79845323 3190 Q9ERU9 Ranbp2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 0 7 0 1 88.476 88.476 3 0.0012936 32631 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.185 37.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4942 3190 4764 11504 13272 13272 1 ELLFHPALFEVPSLK Unmodified 1738.9658 0.96579333 687 D3YUV1;Q99J45 Nrbp1 Nuclear receptor-binding protein yes no 0 0 0 0 9 0 1 84.809 84.809 4 0.0080404 29493 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.317 21.654 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 2736.9 4943 687 4765 11505 13273 13273 1 ELLFYCSLPQSR Unmodified 1511.7442 0.74424959 481 A2AKD7;Q61234 Snta1 Alpha-1-syntrophin yes no 0 0 0 0 8 0 1 72.638 72.638 2 0.00016502 24542 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.05 38.958 20.292 18.848 0 0 0 20.254 19 19 0 0 0 19 1 1 0 0 0 1 2220.5 4944 481 4766 11506 13274 13274 1 ELLIFLAQYLCNEYQK Unmodified 2044.0339 0.03394925 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 11.5 0.5 1 1 109.6 109.6 3 0.00012198 29886 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.648 56.603 5.365 0 0 0 4.9786 7.3199 5 0 0 0 5 7 1 0 0 0 1 1 1392.3 4945 1868 4767 11507;11508 13275;13276 13276 2 ELLLQPVTISR Unmodified 1267.75 0.7499869 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 0 8 0.816 1 1 1 70.086 70.086 2 0.006026 23289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.64 22.531 147.72 214.73 115.99 69.712 154.03 203.47 139 213 111 65 157 195 2 3 1 1 2 2 82535 4946 1663 4768 11509;11510;11511 13277;13278;13279 13278 3 ELLLTGPGLEER Unmodified 1325.7191 0.7190807 825 E9PV22;Q505F5 Lrrc47 Leucine-rich repeat-containing protein 47 yes no 0 0 0 0 5.5 0.5 1 1 67.69 67.69 2 0.00097581 23636 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.927 33.223 29.814 29.315 67.16 28.302 48.116 49.036 28 28 65 28 46 46 1 1 2 1 1 1 3815 4947 825 4769 11512;11513 13280;13281 13281 2 ELLNALFSNPMDDNLICAVK Unmodified 2276.1181 0.11808959 770 D3Z3J6;G3UYE5;F6Y616;Q8VE62 Paip1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 0 0 9 0 1 101.01 101.01 3 7.8457E-07 35955 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.184 47.592 0 0 12.984 0 12.125 12.446 0 0 12 0 12 12 0 0 1 0 1 1 922.43 4948 770 4770 11514 13282 13282 1 ELLPLIKPQGR Unmodified 1262.7711 0.77105669 1582 P48758 Cbr1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 1 10.8 1.48 1 1 1 1 63.428 63.428 3 1.285E-05 17033 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.87 89.666 354.29 285.88 842.19 294.73 434.09 0 334 293 808 296 415 0 3 2 4 2 2 0 109570 4949 1582 4771 11515;11516;11517;11518 13283;13284;13285;13286 13285 4 ELLPVLISAMK Unmodified 1212.7152 0.71518129 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 11 0 1 91.176 91.176 2 6.2113E-08 29233 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.4 83.179 0 0 0 17 0 0 0 0 0 17 0 0 0 0 0 1 0 0 2830 4950 2182 4772 11519 13287 13287 1 ELLQHPFLK Unmodified 1123.639 0.63897988 2106;2556 Q8CIN4;Q61036 Pak2;Pak3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 no no 0 0 0 0 9 0.816 1 1 1 60.818 60.818 3 0.0041446 19071 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.04 37.997 256.63 173.62 183.4 193.96 99.548 224.22 241 176 185 185 102 213 3 2 2 2 1 2 39121 4951 2556;2106 4773 11520;11521;11522 13288;13289;13290 13288 3 ELLQHQFLK Unmodified 1154.6448 0.64479354 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 0 8.5 0.5 1 1 57.501 57.501 3 0.00022678 17446 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.4 59.4 69.42 179.95 157.24 262.52 72.345 0 65 176 158 250 74 0 1 2 1 2 1 0 33059 4952 1099 4774 11523;11524 13291;13292 13291 2 ELLQSFQSK Unmodified 1078.5659 0.56587452 1890 Q06890 Clu Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 0 9 0 1 63.827 63.827 3 0.0069188 19724 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.067 34.213 0 0 115.44 104.61 0 0 0 0 111 102 0 0 0 0 1 1 0 0 9541.2 4953 1890 4775 11525 13293 13293 1 ELLQTPNFR Unmodified 1116.5928 0.59275797 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 8 0 1 60.476 60.476 2 0.0012581 18815 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.2 52.628 79.128 54.248 0 79.355 81.202 57.379 74 56 0 74 83 56 1 1 0 1 1 1 5091.1 4954 1994 4776 11526 13294 13294 1 ELLSGPNR Unmodified 884.47158 0.4715802 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 10 3 1 1 43.308 43.308 2 0.031071 12899 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.692 59.971 69.323 159.59 166.4 101.65 145.39 88.478 65 157 158 93 139 83 1 2 1 1 1 1 13950 4955 3022 4777 11527;11528 13295;13296 13296 2 ELLSNVDQDVHELEK Unmodified 1766.8687 0.86865806 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 0 4 0 1 69.493 69.493 4 0.0024283 25234 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.482 27.25 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2145.5 4956 1115 4778 11529 13297 13297 1 ELLTSFGPLK Unmodified 1103.6227 0.62266112 1457 Q3KQM4;Q80XR5;P26369 U2af2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 9 0 1 76.028 76.028 2 0.00013195 25430 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.07 48.897 39.022 55.836 66.783 0 0 59.696 37 56 65 0 0 56 1 1 1 0 0 1 6660.3 4957 1457 4779 11530 13298 13298 1 ELLTTDGNEPVGLK Unmodified 1484.7722 0.77223848 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 5 0 1 65.743 65.743 3 3.4359E-11 23386 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.93 97.826 0 38.575 47.458 0 0 69.29 0 37 46 0 0 65 0 1 1 0 0 1 6928.2 4958 814 4780 11531 13299 13299 1 ELLVPLTSSMYVPGK Unmodified 1632.8797 0.87968044 3326 Q9WU28 Pfdn5 Prefoldin subunit 5 yes yes 0 0 0 0 9 0 1 83.46 83.46 3 0.00088733 28826 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.267 36.805 39.701 0 0 0 47.137 28.503 37 0 0 0 46 28 1 0 0 0 1 1 4072 4959 3326 4781 11532 13300 13300 1 ELNDFISYLQR Unmodified 1396.6987 0.69867961 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 9.33 2.62 1 1 1 82.104 82.104 3 0.00010227 28961 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.839 71.119 20.178 67.476 19.344 40.441 18.538 68.761 19 65 19 37 19 65 1 2 1 1 1 2 14082 4960 1470 4782 11533;11534;11535 13301;13302;13303 13302 3 ELNDLAR Unmodified 829.42938 0.42938104 1746 P62838 Ube2d2 Ubiquitin-conjugating enzyme E2 D2 yes yes 0 0 0 0 4 0 1 44.558 44.558 2 0.019441 13699 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.9 26.599 0 0 0 229.07 199.03 172.34 0 0 0 213 206 167 0 0 0 1 1 1 20051 4961 1746 4783 11536 13304 13304 1 ELNEMQAQIAEESQIR Unmodified 1887.8996 0.89964061 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 4 0 1 66.063 66.063 3 0.00057873 23621 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.912 39.246 39.564 27.124 0 0 19.874 0 37 28 0 0 19 0 1 1 0 0 1 0 3093 4962 347 4784 11537 13305;13306 13306 2 ELNHFPEEK Unmodified 1141.5404 0.54038805 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 4 0 1 46.624 46.624 3 0.045935 14670 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.283 16.429 78.87 63.243 35.842 0 36.358 68.253 74 65 37 0 37 65 1 1 1 0 1 1 2597.4 4963 1433 4785 11538 13307 13307 1 ELNHYLEAEK Unmodified 1244.6037 0.60371659 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 5 0 1 51.75 51.75 3 0.0050598 16846 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.172 26.987 0 48.486 27.387 0 46.477 47.71 0 46 28 0 46 46 0 1 1 0 1 1 3735.8 4964 1198 4786 11539 13308 13308 1 ELNITAAK Unmodified 858.48108 0.48108226 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 7 0.816 1 1 1 53.777 53.777 2;3 0.0077071 17090 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.993 25.884 49.081 67.311 157.16 189.11 198.45 181.95 46 65 157 185 204 176 1 1 2 2 2 2 15638 4965 996 4787 11540;11541;11542 13309;13310;13311 13309 3 ELNLILTTGGTGFAPR Unmodified 1658.8992 0.89917033 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 9 0 1 78.646 78.646 3 0.0017405 26706 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.537 27.305 39.474 0 38.174 37.293 46.403 0 37 0 37 37 46 0 1 0 1 1 1 0 6487.8 4966 416 4788 11543 13312 13312 1 ELNNEILGPVVQFLGVPYATPPLGAR Unmodified 2763.496 0.49595105 2191 Q69ZK9 Nlgn2 Neuroligin-2 yes yes 0 0 0 0 9.5 0.5 1 1 103.16 103.16 3 6.8613E-05 33261 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.931 36.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2311.1 4967 2191 4789 11544;11545 13313;13314 13314 2 ELNSYSIPFLGSDISVVK Unmodified 1967.0252 0.025158703 2635 Q8R127 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes yes 0 0 0 0 10 3 1 1 89.338 89.338 3 0.0016869 33038 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.598 25.46 49.176 36.052 0 29.749 45.439 38.145 46 37 0 28 46 37 1 1 0 1 1 1 5192.6 4968 2635 4790 11546;11547 13315;13316 13315 2 ELNWSELR Unmodified 1045.5193 0.51925868 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 5.5 0.5 1 1 62.448 62.448 2 0.01679 21216 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.163 22.934 315.15 131.18 302.57 233.71 271.86 238.49 296 139 298 235 278 231 2 1 2 2 2 2 30977 4969 2179 4791 11548;11549 13317;13318 13318 2 ELNYFAK Unmodified 883.44397 0.44396847 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 9.25 2.28 1 1 1 1 60 60 2 0.0089677 19343 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.25 45.799 1315.8 1060.3 911.46 606.57 1146.9 1450.1 1242 1089 896 575 1151 1391 6 5 4 2 4 5 337200 4970 1334 4792 11550;11551;11552;11553 13319;13320;13321;13322;13323;13324 13319 6 ELPADLAR Unmodified 883.47633 0.47633123 825 E9PV22;Q505F5 Lrrc47 Leucine-rich repeat-containing protein 47 yes no 0 0 0 0 5 0 1 50.834 50.834 2 0.048601 16378 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.207 30.394 39.089 56.022 55.379 37.14 0 59.696 37 56 56 37 0 56 1 1 1 1 0 1 2480.3 4971 825 4793 11554 13325 13325 1 ELPDLEDLMK Unmodified 1201.59 0.59004036 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 6 0 1 83.621 83.621 3 0.00090578 31138 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.662 50.041 20.087 0 50.448 6.8303 0 9.594 19 0 47 9 0 9 1 0 1 1 0 1 1735.9 4972 2899 4794 11555 13326 13326 1 ELPDPFNDLSVGGWEITEEPVGR Unmodified 2555.218 0.21799786 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 5 0 1 94.398 94.398 3 0.0051708 35268 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.812 22.491 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 1182 4973 2323 4795 11556 13327 13327 1 ELPEDVGLDASTAESFHR Unmodified 1971.9174 0.91739917 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 4 0 1 61.647 61.647 3 0.039616 21734 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.659 17.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4974 893 4796 11557 13328 13328 1 ELPEPLLTDR Unmodified 1181.6292 0.62920306 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 8.5 4.5 1 1 64.008 64.008 2 0.0031902 22732 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.645 40.536 49.358 0 0 60.202 53.483 67.764 46 0 0 56 56 65 1 0 0 1 1 1 7784.6 4975 816 4797 11558;11559 13329;13330 13329 2 ELPEPLLTFDLYPHVVGFLNIDESQR Unmodified 3040.5546 0.55458814 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 13 0 1 99.944 99.944 4 0.020281 40396 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 30.135 20.015 9.657 0 0 20.056 37.781 0 9 0 0 19 37 0 1 0 0 1 1 0 1704.6 4976 2047 4798 11560 13331 13331 1 ELPGHTGYLSCCR Unmodified 1548.6813 0.68133176 1751;1485 P29387;P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;E9PWM7 Gnb4;Gnb2 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 0 0 0 0 6 0.816 1 1 1 43.613 43.613 3 6.7531E-19 12330 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 144.51 129.13 39.516 202.72 183.33 178.68 194.8 202.62 37 195 186 176 194 194 1 3 3 3 3 3 58726 4977 1485;1751 4799 11561;11562;11563 13332;13333;13334;13335 13333 4 ELPPDQAEYCIAR Unmodified 1560.7242 0.72424243 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 3.67 0.471 1 2 55.514 55.514 2;3 0.00039413 19079 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.034 43.743 69.565 38.901 58.156 20.252 122.06 68.509 65 37 56 19 121 65 2 1 2 1 3 2 7614.1 4978 418;310 4800 11564;11565;11566 13336;13337;13338;13339;13340 13339 5 ELPQDLEGAR Unmodified 1126.5619 0.56185177 1894 Q0KL02;A0A2I3BRP6 Trio Triple functional domain protein yes no 0 0 0 0 3 0 1 50.859 50.859 2 0.006057 17119 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.781 40.941 20.387 0 0 20.767 0 39.442 19 0 0 19 0 37 1 0 0 1 0 1 1798 4979 1894 4801 11567 13341 13341 1 ELPRPEGLQR Unmodified 1193.6517 0.65166983 2766 Q91XH5;G3UXX3;Q64105;G3UZ79 Spr Sepiapterin reductase yes no 0 0 0 1 5 0 1 42.686 42.686 3 0.018317 12443 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.149 19.673 0 68.259 53.913 57.995 0 49.036 0 65 56 56 0 46 0 1 1 1 0 1 8595.5 4980 2766 4802 11568 13342 13342 1 ELPSAGSR Unmodified 815.41373 0.41373097 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 5 0 1 35.422 35.422 2 0.051648 8878 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.969 27.768 39.462 47.347 0 29.033 83.516 57.313 37 47 0 28 83 56 1 1 0 1 1 1 20567 4981 815;2590 4803 11569 13343 13343 1 ELPSTFGQLSALK Unmodified 1389.7504 0.75038083 482 A2AKH7;Q8JZX5;Q9D1G5 Lrrc57 Leucine-rich repeat-containing protein 57 yes no 0 0 0 0 8.5 0.5 1 1 75.764 75.764 3 7.9718E-06 26034 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.17 84.217 0 48.944 0 40.441 0 0 0 46 0 37 0 0 0 1 0 1 0 0 6005.2 4982 482 4804 11570;11571 13344;13345 13344 2 ELPTAFDYVEFTR Unmodified 1586.7617 0.76167379 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 80.321 80.321 3 6.7346E-14 30894 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.1 110.56 68.688 102.38 130.07 92.032 99.12 97.391 65 102 130 93 102 93 2 2 3 3 3 2 104290 4983 551 4805 11572;11573;11574 13346;13347;13348 13348 3 ELPTEPPYTAYVGNLPFNTVQGDIDAIFK Unmodified 3208.5968 0.59684688 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 13 0 1 103.98 103.98 3 0.0010356 42299 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.558 28.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4984 3333 4806 11575 13349 13349 1 ELPTGGQEGEQLQLQK Unmodified 1753.8846 0.88464248 2670 Q8R570 Snap47 Synaptosomal-associated protein 47 yes yes 0 0 0 0 4 0 1 60.118 60.118 3 1.5564E-05 21099 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.344 80.98 29.807 0 39.884 0 0 0 28 0 37 0 0 0 1 0 1 0 0 0 4324.6 4985 2670 4807 11576 13350 13350 1 ELPVNAQNYVR Unmodified 1301.6728 0.67279921 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 6 0 1 55.739 55.739 2 0.0032922 18078 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.275 22.462 39.701 0 0 30.604 0 0 37 0 0 28 0 0 1 0 0 1 0 0 5152.4 4986 1558 4808 11577 13351 13351 1 ELPWPLAFEK Unmodified 1228.6492 0.64921022 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 9 0 1 86.079 86.079 2 0.0051496 30114 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.228 30.86 12.786 0 15.084 0 19.874 0 12 0 14 0 19 0 1 0 1 0 1 0 3050.4 4987 2845 4809 11578 13352 13352 1 ELQAAGK Unmodified 715.38645 0.38645359 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 7.75 3.11 1 1 1 1 39.953 39.953 2;3 0.017092 10667 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.01 64.582 541.99 1018.7 1413.2 1114.3 1247.4 734.59 511 1014 1411 1118 1261 710 3 4 4 4 3 2 174570 4988 1316 4810 11579;11580;11581;11582 13353;13354;13355;13356 13354 4 ELQAHGADELLK Unmodified 1322.683 0.68302954 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 4 0 2 53.206 53.206 3;4 0.00012652 17768 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.908 34.268 157.68 46.934 149.75 0 0 108.73 148 46 139 0 0 102 2 1 1 0 0 1 16260 4989 2971 4811 11583;11584 13357;13358 13357 2 ELQAHGADELLKR Unmodified 1478.7841 0.78414057 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 1 5 0 1 47.857 47.857 4 0.001771 14917 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.147 26.235 0 86.047 135.5 0 82.835 115.96 0 83 130 0 83 111 0 1 1 0 1 1 9844.2 4990 2971 4812 11585 13359 13359 1 ELQAQIAELQEDFESEK Unmodified 2005.948 0.94803059 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 4 0.816 1 1 1 86.939 86.939 3 4.2941E-13 33214 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.264 61.374 39.701 0 0 0 19.197 44.706 37 0 0 0 19 44 1 0 0 0 1 3 7632.9 4991 1974 4813 11586;11587;11588 13360;13361;13362;13363 13363 4 ELQDQLEAEQYFSTLYK Unmodified 2104.0001 6.61646E-05 347 F8VPK5;A0A1Y7VMN0;P70336;P70335 Rock2;Rock1 Rho-associated protein kinase;Rho-associated protein kinase 2;Rho-associated protein kinase 1 yes no 0 0 0 0 5 0 1 83.955 83.955 3 7.3125E-05 31868 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.102 43.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4992 347 4814 11589 13364 13364 1 ELQELQTIK Unmodified 1100.6077 0.60773933 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8 3.56 1 1 1 61.227 61.227 2;3 0.00049239 20707 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.692 37.16 88.177 99.867 162.44 70.902 167.77 106.38 83 102 159 74 167 102 2 3 3 2 3 2 12283 4993 1275 4815 11590;11591;11592 13365;13366;13367 13366 3 ELQELVQYPVEHPDK Unmodified 1822.9101 0.91012895 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 5 0.894 2 1 2 64.887 64.887 3;4 3.7801E-05 22237 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.96 51.121 168.8 64.209 150.38 114.23 240.65 210.6 158 66 148 112 242 204 4 3 4 3 5 5 53018 4994 1875 4816 11593;11594;11595;11596;11597 13368;13369;13370;13371;13372;13373;13374 13374 7 ELQETQQER Unmodified 1159.5469 0.54692999 1898 Q0VGU4 Vgf yes yes 0 0 0 0 1.67 0.471 1 2 31.501 31.501 2;3 1.0778E-25 7436 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 195.58 80.684 65.273 0 30.194 39.322 77.682 131.03 61 0 28 37 79 125 2 0 1 1 2 3 12320 4995 1898 4817 11598;11599;11600 13375;13376;13377 13375 3 ELQNLIQELLQAR Unmodified 1566.873 0.87295558 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 10.8 1.48 1 1 1 1 101.03 101.03 3 0.00012163 32743 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.769 44.788 28 0 9 0 28.987 8.7668 28 0 9 0 28 9 1 0 1 0 1 1 19639 4996 1359 4818 11601;11602;11603;11604 13378;13379;13380;13381;13382 13379 5 ELQQELQEYEVVAESEK Unmodified 2049.9742 0.97424534 3068 Q9D5V6 Syap1 Synapse-associated protein 1 yes yes 0 0 0 0 3 0 1 79.183 79.183 3 3.822E-05 29949 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.175 47.686 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4997 3068 4819 11605 13383 13383 1 ELQSLLVEER Unmodified 1214.6507 0.65066678 3026 Q9D0J4 Arl2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 0 5 0 1 65.211 65.211 2 0.027355 23088 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.164 18.597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4998 3026 4820 11606 13384 13384 1 ELQSTFK Unmodified 851.43888 0.43888309 2510 Q8C845;Q9D8Y0 Efhd2 EF-hand domain-containing protein D2 yes no 0 0 0 0 7 0 1 51.186 51.186 2 0.015633 15079 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.94 52.79 88.238 61.778 85.655 0 83.862 86.085 83 65 83 0 83 83 1 1 1 0 1 1 3421.2 4999 2510 4821 11607 13385 13385 1 ELQSVLSTYLRPLQTSDK Unmodified 2077.1055 0.10553429 3191;192 A0A0R4J0X8;A0A1B0GRS3;Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 no no 0 0 0 1 10.3 0.471 2 1 81.527 81.527 3;4 0.00058234 25790 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.957 35.719 99.431 0 60.242 0 37.384 38.375 93 0 56 0 37 37 2 0 1 0 1 1 13420 5000 192;3191 4822 11608;11609;11610 13386;13387;13388 13387 3 ELQTLHNLR Unmodified 1122.6146 0.61455605 1481;2139;1507 P28738;Q61768;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A no no 0 0 0 0 5 0 1 43.299 43.299 3 0.020425 12722 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.49 13.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5001 1481;2139;1507 4823 11611 13389 13389 1 ELQVGIPVTDEAGQR Unmodified 1610.8264 0.82639932 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 5 0.816 1 1 1 62.064 62.064 3 0.00057706 21852 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.641 38.92 99.215 71.444 81.994 37.6 36.975 29.848 93 74 83 37 37 28 2 2 2 1 1 1 27741 5002 2730 4824 11612;11613;11614 13390;13391;13392 13390 3 ELRPNEEVTWK Unmodified 1399.7096 0.70957864 1339 P0DN34 yes yes 0 0 0 1 6 0.707 1 2 1 52.831 52.831 3;4 0.00039155 16611 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.856 57.12 169.53 97.71 74.284 115.02 259.42 211.37 158 93 74 111 260 204 1 2 1 2 3 2 18007 5003 1339 4825 11615;11616;11617;11618 13393;13394;13395;13396 13394 4 ELSAEELSQR Unmodified 1160.5673 0.56733108 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3;A2AMI7 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 3 0 1 47.838 47.838 2 0.046309 15628 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.725 22.039 30.044 0 0 0 65.345 77.019 28 0 0 0 65 74 1 0 0 0 1 1 3404.8 5004 133 4826 11619 13397 13397 1 ELSDEIEDYTHR Unmodified 1505.6634 0.66341631 2511 Q8C8N2;A0A0N4SVJ6 Scai Protein SCAI yes no 0 0 0 0 2 0 1 56.95 56.95 3 1.6692E-21 19284 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 159.99 125.81 34.247 0 14.975 0 0 29.848 32 0 14 0 0 28 1 0 1 0 0 1 8864.9 5005 2511 4827 11620 13398 13398 1 ELSDIAHR Unmodified 939.47739 0.47739386 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 38.81 38.81 3 0.00015535 11002 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 148.99 101.14 593.64 467.66 396.37 380.82 705.08 402.12 557 463 389 371 704 389 6 4 4 4 6 4 580080 5006 1309 4828 11621;11622;11623;11624;11625 13399;13400;13401;13402;13403;13404;13405 13400 7 ELSDIALR Unmodified 915.50255 0.50254598 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 7 3.54 1 1 1 1 57.204 57.204 2 0.010118 19604 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.458 30.037 690.58 577.71 844.9 361.35 718.1 780.07 651 600 831 370 728 751 5 5 5 2 4 4 300600 5007 1308 4829 11626;11627;11628;11629 13406;13407;13408;13409;13410 13408 5 ELSDLAR Unmodified 802.41848 0.418482 88 A0A0G2JE32;A0A0G2JGL0;P61079;A0A0G2JF40;Q05CK8;A0A0G2JGZ3 Ube2d3 Ubiquitin-conjugating enzyme E2 D3 yes no 0 0 0 0 5.5 0.5 1 1 47.527 47.527 2 0.021981 14797 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.76 0 178.23 0 161.14 127.32 274.57 271.46 167 0 155 130 277 262 1 0 1 1 1 1 14246 5008 88 4830 11630;11631 13411;13412 13411 2 ELSDLESAR Unmodified 1018.4931 0.49310351 616 E9QAI5;G3UWN2;B2RQC6 Cad CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 0 3 0 1 49.938 49.938 2 0.021008 16671 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.216 30.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5009 616 4831 11632 13413 13413 1 ELSDQAGSDFENSDVR Unmodified 1767.7548 0.75475052 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 2 0.816 1 1 1 51.449 51.449 2;3 1.1207E-44 17345 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 170.79 126.6 109.87 55.718 86.415 85.369 102.77 20.254 103 56 84 83 102 19 3 3 2 2 2 1 82091 5010 2585 4832 11633;11634;11635 13414;13415;13416;13417 13417 4 ELSDQAGSDFENSDVR Deamidation (N) 1768.7388 0.7387661 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 1 0 0 1 0 1 52.815 52.815 3 2.228E-05 16258 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.5 84.425 0 29.478 18.789 0 29.288 0 0 28 19 0 28 0 0 1 1 0 1 0 4143.6 5011 2585 4832 11636 13418 13418 946 1 ELSEQIEK Unmodified 974.49204 0.49204087 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 3.5 0.5 1 1 49.973 49.973 2 0.0012246 16232 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.06 42.247 0 88.312 0 71.045 0 0 0 83 0 65 0 0 0 1 0 1 0 0 5949.2 5012 1451 4833 11637;11638 13419;13420 13420 2 ELSEVKDSLDMEVK Unmodified 1620.7917 0.79165329 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 1 9 4 1 1 68.942 68.942 4 9.1229E-05 25377 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.464 71.016 88.311 67.89 201.68 83.228 0 0 83 65 194 83 0 0 1 1 2 1 0 0 12254 5013 491 4834 11639;11640 13421;13422 13421 2 ELSGESDELGISQDEQLSK Unmodified 2062.9542 0.95423818 2668 Q8R550;E9Q0C1;B1AZ85 Sh3kbp1 SH3 domain-containing kinase-binding protein 1 yes no 0 0 0 0 2 0 1 64.447 64.447 3 4.8315E-05 22883 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.253 37.568 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 1344.2 5014 2668 4835 11641 13423 13423 1 ELSGLPSGPSVGSGPPPPPPGPPPPPISTSSGSDDSASR Unmodified 3617.7485 0.74854951 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 4.5 0.5 1 1 70.056 70.056 4 2.5809E-08 25479 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.924 33.507 9.657 0 0 0 0 48.848 9 0 0 0 0 47 1 0 0 0 0 2 11551 5015 1536 4836 11642;11643 13424;13425 13424 2 ELSIEKPNK Unmodified 1056.5815 0.58152458 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 1 7 0 1 50.194 50.194 3 0.0061873 14606 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.378 37.292 98.801 90.799 89.159 123.95 101 0 93 93 93 120 102 0 1 1 1 1 1 0 4090 5016 860 4837 11644 13426 13426 1 ELSLASNELKDEGAR Unmodified 1630.8162 0.81622856 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 1 6 0 1 54.955 54.955 3 0.0011347 17698 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.231 36.948 0 68.44 43.09 57.823 43.452 58.456 0 65 46 56 46 56 0 1 1 1 1 1 3504.9 5017 2741 4838 11645 13427 13427 1 ELSLDDFK Unmodified 965.47058 0.47057715 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 6 0.816 1 1 1 70.16 70.16 2 0.006133 25422 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.22 45.954 216.57 259.18 170.67 128.97 211.3 162.4 204 260 167 120 213 158 3 3 2 1 2 2 50555 5018 1422 4839 11646;11647;11648 13428;13429;13430 13428 3 ELSLDDPEVEQVR Unmodified 1527.7417 0.74166663 423 A2A4P4;A2A4P3;Q3THG9 Gm27029;Aarsd1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 0 2 0 1 61.26 61.26 3 0.038595 21345 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 37.248 16.295 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 3374.8 5019 423 4840 11649 13431 13431 1 ELSNHNER Unmodified 997.45772 0.45772105 934;12 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22;Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0 Clasp2;Clasp1 CLIP-associating protein 2;CLIP-associating protein 1 no no 0 0 0 0 3 0 1 19.771 19.771 3 0.0054719 2982 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.573 35.412 0 0 67.404 65.691 71.051 97.111 0 0 65 65 74 93 0 0 1 1 1 1 4113 5020 934;12 4841 11650 13432 13432 1 ELSQATIDSK Unmodified 1090.5506 0.55061839 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 5 0 1 50.205 50.205 3 0.024587 16126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.612 25.655 39.135 35.643 65.002 67.171 0 0 37 37 65 65 0 0 1 1 1 1 0 0 3911.1 5021 1466 4842 11651 13433 13433 1 ELSQDSTGR Unmodified 991.45705 0.45705235 1845 P97355;E9PZ58 Sms Spermine synthase yes no 0 0 0 0 4 0 1 30.598 30.598 2 0.030067 7031 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.167 24.729 60.088 0 0 34.976 0 44.772 56 0 0 32 0 42 1 0 0 1 0 1 9348.2 5022 1845 4843 11652 13434 13434 1 ELSSEPR Unmodified 816.39775 0.39774656 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3 0 1 31.641 31.641 2 0.00095579 8141 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.86 48.757 167.77 154.03 165.4 116.9 233.94 310.99 158 158 167 120 239 298 1 1 1 1 1 1 34050 5023 510 4844 11653 13435 13435 1 ELSSFYFSIVK Unmodified 1318.6809 0.68090428 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 9 0 1 84.328 84.328 3 0.0066642 29251 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.998 26.562 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 2323.7 5024 2413 4845 11654 13436 13436 1 ELSTTLNADEAVTR Unmodified 1518.7526 0.75256567 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 4 0.707 1 2 1 55.018 55.018 2;3 7.9215E-32 18976 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 170 135.31 60.63 86.953 48.898 69.93 29.288 50.102 57 83 47 65 28 47 3 2 2 2 1 2 28637 5025 1957 4846 11655;11656;11657;11658 13437;13438;13439;13440 13437 4 ELSVQCAGDWLPR Unmodified 1529.7297 0.72966216 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 0 6 0 1 72.118 72.118 3 0.0067122 25825 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.467 33.776 29.992 0 8.708 19.727 27.713 19.463 28 0 9 19 28 19 1 0 1 1 1 1 2298.3 5026 3121 4847 11659 13441 13441 1 ELTAVVQK Unmodified 886.51238 0.51238239 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 9.33 2.62 1 1 1 54.241 54.241 2 0.0029178 16620 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.81 57.329 334.69 347.6 260.52 396.31 488.82 190.91 315 352 266 379 491 185 3 3 2 2 3 2 22283 5027 1755 4848 11660;11661;11662 13442;13443;13444 13442 3 ELTEEEK Unmodified 876.40764 0.40764254 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 no no 0 0 0 0 5.5 4.39 1 1 1 1 41.884 41.884 2 0.01413 12687 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 114.93 66.429 207.13 161.01 217.95 162.09 268.84 239.64 195 162 218 158 272 232 2 1 2 1 2 2 24865 5028 743 4849 11663;11664;11665;11666 13445;13446;13447;13448 13445 4 ELTEEKETAFEFLSSA Unmodified 1829.8571 0.85709032 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 1 7.25 3.49 1 1 1 1 87.971 87.971 3 3.6193E-05 34339 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.36 74.709 432.14 374.62 203.67 397.31 458.22 475.11 405 375 205 381 464 454 5 5 2 5 5 5 205940 5029 1373 4850 11667;11668;11669;11670 13449;13450;13451;13452;13453;13454;13455 13454 7 ELTFDQLQLLK Unmodified 1346.7446 0.74456717 566 B0R058;Q8C0L9 Gpcpd1 Glycerophosphocholine phosphodiesterase GPCPD1 yes no 0 0 0 0 7 0 1 82.594 82.594 3 0.014359 29883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.559 20.461 29.799 27.484 17.881 19.701 0 0 28 28 19 19 0 0 1 1 1 1 0 0 1424.1 5030 566 4851 11671 13456 13456 1 ELTGEDVLVR Unmodified 1129.5979 0.59790293 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 4 0 1 57.102 57.102 2 0.012221 19611 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.283 31.911 49.026 65.854 0 0 56.251 67.685 46 65 0 0 56 65 1 1 0 0 1 1 6182.3 5031 2418 4852 11672 13457 13457 1 ELTITWAPLSR Unmodified 1285.703 0.7030367 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 75.732 75.732 2;3 1.0683E-07 25985 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.1 74.935 167.82 196.01 335.8 267.1 142.69 272.56 158 195 333 260 149 259 3 4 5 4 4 4 65233 5032 1362 4853 11673;11674;11675;11676;11677 13458;13459;13460;13461;13462;13463 13459 6 ELTKVEEEIQTLSQVLAAK Unmodified 2128.1627 0.16271482 750 D3Z637;D3Z125;E9PUA7;D3Z7X7;F8WHQ1;Q62393;D3Z2U2 Tpd52 Tumor protein D52 yes no 0 0 0 1 7.33 0.471 2 1 99.868 99.868 4 5.5576E-10 36484 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.72 91.854 71.538 23.896 39.049 46.289 56.818 19.737 67 26 38 44 57 19 3 2 2 2 3 1 3799.2 5033 750 4854 11678;11679;11680 13464;13465;13466 13465 3 ELTLEKPELK Unmodified 1198.6809 0.68090428 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 7 0 1 60.604 60.604 3 0.00059551 19554 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.442 30.642 267.94 217.52 228.06 240.89 184.54 0 252 225 234 236 187 0 1 1 1 1 1 0 16334 5034 2186 4855 11681 13467 13467 1 ELTLQDVELLK Unmodified 1299.7286 0.72858275 2546 Q8CH72 Trim32 E3 ubiquitin-protein ligase TRIM32 yes yes 0 0 0 0 6 0 1 80.64 80.64 3 0.00063786 29769 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.652 27.293 29.857 27.646 7.9287 0 0 0 28 28 9 0 0 0 1 1 1 0 0 0 1716.9 5035 2546 4856 11682 13468 13468 1 ELTLVLTAIGNDTANR Unmodified 1699.9105 0.9104633 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 8 0 1 84.226 84.226 3 0.042704 30049 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.858 10.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5036 1980 4857 11683 13469 13469 1 ELTLWINDK Unmodified 1130.5972 0.59717465 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 8 0 1 55.45 55.45 2 0.026549 16445 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.91 5.3608 39.21 45.567 43.834 67.478 50.746 107.28 37 46 46 65 55 102 1 1 1 1 1 1 4645.2 5037 893 4858 11684 13470 13470 1 ELTNQQEASVER Unmodified 1402.6688 0.66883604 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 2.5 0.5 1 1 38.621 38.621 2;3 1.356E-14 11394 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 138.45 77.288 39.464 38.901 67.797 0 48.116 29.848 37 37 65 0 46 28 1 1 2 0 1 1 15112 5038 895 4859 11685;11686 13471;13472 13472 2 ELTNQQEASVER Deamidation (N) 1403.6529 0.65285163 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 1 0 0 2 0 1 41.005 41.005 2 0.031779 12305 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.334 26.61 0 0 0 19.514 8.5176 0 0 0 0 18 9 0 0 0 0 1 1 0 926.93 5039 895 4859 11687 13473 13473 245 1 ELTPQVISAAR Unmodified 1183.6561 0.65608651 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 6 0 1 54.991 54.991 2 0.027723 17735 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.979 17.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5040 2182 4860 11688 13474 13474 1 ELTSICSPIISK Unmodified 1346.7116 0.71155248 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 7 0 1 68.134 68.134 2 0.011444 23070 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.172 19.154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5041 1957 4861 11689 13475 13475 1 ELTSLVK Unmodified 788.46437 0.46436956 891 E9Q317;O55128;D3YY73;D3Z2N9 Gm10094;Sap18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 0 8 0 1 59.206 59.206 2 0.034637 18248 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.116 40.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5042 891 4862 11690 13476 13476 1 ELTTEIDNNIEQISSYK Unmodified 1995.9637 0.96368066 659 CON__P13645 yes yes 0 0 0 0 5 0 1 79.432 79.432 3 5.4539E-07 29841 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.837 61.973 29.952 18.196 0 20.767 0 20.254 28 19 0 19 0 19 1 1 0 1 0 1 4371.5 + 5043 659 4863 11691 13477 13477 1 ELTTEIDNNIEQISSYK Deamidation (N) 1996.9477 0.94769624 659 CON__P13645 yes yes 0 1 0 0 6 0 1 79.378 79.378 3 6.827E-05 29176 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.107 39.94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 5044 659 4863 11692 13478 13478 191 1 ELVALMSAIR Unmodified 1101.6216 0.62161526 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 9.5 0.5 1 1 81.221 81.221 2 2.3613E-05 27943 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.965 25.736 59.671 0 70.029 0 0 0 56 0 65 0 0 0 1 0 1 0 0 0 13872 5045 1446 4864 11693;11694 13479;13480 13479 2 ELVAQGK Unmodified 743.41775 0.41775372 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 6 0 1 43.235 43.235 2 0.052604 12176 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.854 30.136 0 67.608 92.81 84.402 99.874 85.628 0 65 93 84 102 83 0 1 1 1 1 1 6052.6 5046 287;1450 4865 11695 13481 13481 1 ELVDDSITNVK Unmodified 1231.6296 0.62959699 808 F7D432;E9PWE0;E0CYV0;P23506;F6V9F1 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 5.71 3.1 1 2 2 1 1 61.679 61.679 2;3 4.1667E-13 21742 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.23 94.167 219.26 205.05 57.609 91.812 249.54 273.76 205 205 56 84 250 261 4 5 2 2 4 5 65523 5047 808 4866 11696;11697;11698;11699;11700;11701;11702 13482;13483;13484;13485;13486;13487;13488 13484 7 ELVDGAPLWLLK Unmodified 1352.7704 0.77038799 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 8 0.816 1 1 1 90.188 90.188 2;3 1.5305E-07 32641 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.7 68.345 0 14.585 48.908 33.03 8.727 20.005 0 14 47 32 9 19 0 1 2 2 1 1 5125.2 5048 2319 4867 11703;11704;11705 13489;13490;13491 13490 3 ELVDQDVQPAR Unmodified 1268.6361 0.63607935 2191 Q69ZK9;E9QK34;Q99K10 Nlgn2;Nlgn1 Neuroligin-2;Neuroligin-1 yes no 0 0 0 0 2.33 0.471 2 1 46.121 46.121 2;3 2.5086E-08 14477 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.5 91.161 113.24 53.525 37.942 64.735 78.315 100.1 106 56 37 62 81 96 3 2 1 2 3 3 15881 5049 2191 4868 11706;11707;11708 13492;13493;13494 13493 3 ELVEAQELAR Unmodified 1156.6088 0.60880197 791 F6UV57;F6YCM8;F8WIH0;D3Z7V3;H7BX64;Q3URD3 Slmap Sarcolemmal membrane-associated protein yes no 0 0 0 0 3 0 1 54.266 54.266 2 0.013331 18638 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.593 24.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5050 791 4869 11709 13495 13495 1 ELVEFAQDDDR Unmodified 1335.5943 0.59427411 2061 Q5SUH7;Q5SUH6;Q99KN9 Clint1 Clathrin interactor 1 yes no 0 0 0 0 2.5 0.5 1 1 59.183 59.183 2 0.00061779 20856 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.692 36.297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5051 2061 4870 11710;11711 13496;13497 13497 2 ELVEIAVPENLVGAILGK Unmodified 1863.0717 0.071714965 332 A0A1W2P872;D3YVV7 Nova2 yes no 0 0 0 0 13 0 1 104.01 104.01 3 0.0073496 42284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.085 22.579 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 895.49 5052 332 4871 11712 13498 13498 1 ELVEQDIQPAR Unmodified 1296.6674 0.66737948 462 A2AGI2;Q8BYM5;A2AGI0;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 3 0 1 50.317 50.317 2 2.812E-08 16808 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.81 61.248 26.429 40.234 32.54 38.19 16.562 45.365 25 40 34 37 19 43 1 1 1 1 1 1 8318.8 5053 462 4872 11713 13499 13499 1 ELVLALYDYQEK Unmodified 1482.7606 0.76061116 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 0.816 1 1 1 80.623 80.623 3 0.0048079 29708 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.211 30.258 128.76 58.523 63.438 156.77 121.45 126.29 120 56 65 148 121 120 2 1 1 2 2 2 20475 5054 551 4873 11714;11715;11716 13500;13501;13502 13500 3 ELVLDNCK Unmodified 989.48518 0.48518136 720 D3YYE1;D3Z7M9;O35381;F6UFG6;Q9EST5 Anp32a;Anp32b Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 0 5.5 0.5 1 1 54.524 54.524 2;3 0.0031567 17461 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.426 48.629 59.216 113.27 118.39 121.96 171.85 193.37 56 111 121 121 176 186 1 1 2 2 2 2 14719 5055 720 4874 11717;11718 13503;13504 13504 2 ELVNLTGTIPVR Unmodified 1310.7558 0.75580056 2117 Q61187;A0A1B0GRX2;A0A1B0GS10 Tsg101 Tumor susceptibility gene 101 protein yes no 0 0 0 0 8 0 1 69.459 69.459 3 0.0017681 23084 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.528 41.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5056 2117 4875 11719 13505 13505 1 ELVNNLAEIYGR Unmodified 1389.7252 0.72522871 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 0 7 0 1 71.466 71.466 2 0.0039959 24553 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.423 23.701 48.853 44.867 46.834 0 26.935 68.521 46 46 46 0 28 65 1 1 1 0 1 1 8405.9 5057 3271 4876 11720 13506 13506 1 ELVSCSNCTDYQAR Unmodified 1701.7087 0.70866872 1460 Q8C483;P26638 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 5 0 1 45.057 45.057 3 0.062545 13606 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.767 22.335 29.814 0 38.623 28.302 0 49.036 28 0 37 28 0 46 1 0 1 1 0 1 3028.1 5058 1460 4877 11721 13507 13507 1 ELVSDANQHVK Deamidation (N) 1239.6095 0.60953025 2272 Q76MZ3;G3UWL2 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 1 0 0 4 0 1 43.437 43.437 3 0.012772 13088 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.225 37.89 39.299 0 67.623 56.321 45.529 0 37 0 65 56 46 0 1 0 1 1 1 0 5858.3 5059 2272 4878 11722 13508 13508 897 1 ELWIIDEK Unmodified 1044.5492 0.54916182 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 13 0 1 74.575 74.575 2 0.0063571 28214 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.21 57.219 0 126.98 42.154 0 75.794 46.873 0 120 46 0 74 46 0 1 1 0 1 1 3270.8 5060 2244 4879 11723 13509 13509 1 ELWVQSVQAQILASLQGCR Unmodified 2185.1314 0.13137188 1034 F8VQE9;Q8VHH5;A0A0G2JER6 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 11 0 1 97.559 97.559 3 3.9472E-05 32049 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.347 38.208 20.292 18.848 0 9.837 0 0 19 19 0 9 0 0 1 1 0 1 0 0 1992.4 5061 1034 4880 11724 13510 13510 1 ELYLSNNGIEVIEGLENNNK Deamidation (N) 2262.1016 0.10157112 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 1 0 0 4.5 0.5 1 1 86.376 86.376 3 4.0398E-12 33097 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.765 66.227 29.789 27.455 19.664 0 24.058 0 28 28 19 0 23 0 2 2 1 0 1 0 2235.7 5062 1995 4881 11725;11726 13511;13512;13513 13513 795 3 ELYLSNNGIEVIEGLENNNK Unmodified 2261.1176 0.11755554 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 4 0 1 86.381 86.381 4 0.033287 32947 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.767 14.824 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1208.9 5063 1995 4881 11727 13514 13514 1 ELYPGQFKPTICHYFIR Unmodified 2168.0877 0.087716155 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 1 10.5 0.5 1 1 68.487 68.487 4 7.8508E-06 19225 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.584 55.495 217.2 210.2 106.85 215.51 0 0 204 213 111 203 0 0 2 2 1 2 0 0 60398 5064 2702 4882 11728;11729 13515;13516 13516 2 EMAEAFAGEIPK Unmodified 1291.6118 0.61183843 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 5.5 0.5 1 1 69.066 69.066 2;3 4.9311E-09 24263 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.08 64.727 59.76 65.13 0 0 67.99 0 56 65 0 0 65 0 1 1 0 0 1 0 9710.5 5065 1401 4883 11730;11731 13517;13518 13518 2 EMASGVNTR Unmodified 963.44438 0.44437918 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 4.5 0.5 1 1 32.642 32.642 2 0.0014401 7558 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.07 67.895 79.703 27.339 106.59 38.845 0 88.478 75 28 102 37 0 83 2 1 2 1 0 2 10599 5066 1151 4884 11732;11733 13519;13520 13520 2 EMEEATASAQR Unmodified 1221.5296 0.52956537 2656 Q8R307 Vps18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 0 2 0 1 34.838 34.838 2 0.00077087 9342 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.658 62.962 0 0 0 20.239 28.056 8.7934 0 0 0 19 28 9 0 0 0 1 1 1 1348.5 5067 2656 4885 11734 13521 13521 1 EMEFGIVYSCVEDK Unmodified 1704.7375 0.73750923 2819 Q924B0;O55023;Q80ZJ2;A0A0A6YW07 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 5 0 1 76.183 76.183 3 0.046737 28284 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.796 22.98 39.613 17.545 0 49.447 44.204 47.775 37 19 0 46 46 46 1 1 0 1 1 1 4950 5068 2819 4886 11735 13522 13522 1 EMENMYIEELK Unmodified 1427.6313 0.63125325 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 4 0 1 71.005 71.005 3 0.0072072 25771 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.774 28.548 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5069 2301;365 4887 11736 13523 13523 1 EMFAQDHPEVNSLEEVVR Unmodified 2127.9895 0.98951825 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 3 0 1 65.303 65.303 3 0.030231 23701 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.55 15.865 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 2551.2 5070 2432 4888 11737 13524 13524 1 EMFEDTVEER Unmodified 1283.534 0.53398204 458 A2AFI9;A2AFJ1;Q60973 Rbbp7 Histone-binding protein RBBP7 yes no 0 0 0 0 1 0 1 54.314 54.314 2 4.3416E-05 16799 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 117.31 93.09 24.679 0 0 20.767 0 24.518 23 0 0 19 0 23 1 0 0 1 0 1 3561.5 5071 458 4889 11738 13525 13525 1 EMGEAFAADIPR Unmodified 1305.6023 0.60233638 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 3.75 0.829 2 1 1 64.52 64.52 2;3 5.116E-06 22843 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.4 68.332 108.6 53.968 95.687 53.785 100.43 68.018 102 56 93 56 101 65 3 2 2 2 3 1 22575 5072 1400 4890 11739;11740;11741;11742 13526;13527;13528;13529;13530 13528 5 EMIFEVLAPLAENDAIK Unmodified 1901.9809 0.98085105 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 8.17 2.27 1 2 2 1 98.812 98.812 3;4 2.8612E-31 36179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117 91.941 123.19 15.311 30.221 40.441 96.281 78.077 115 15 28 37 93 74 4 2 1 1 3 4 10593 5073 919;937 4891 11743;11744;11745;11746;11747;11748 13531;13532;13533;13534;13535;13536;13537 13533 7 EMLAAACQMFLGK Unmodified 1468.6877 0.68766269 1170 O08917;G3UZZ5;G3UWW8 Flot1 Flotillin-1 yes no 0 0 0 0 11 0 1 86.3 86.3 2 0.00047891 27337 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.662 61.438 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1457.4 5074 1170 4892 11749 13538 13538 1 EMLNISGPPLK Unmodified 1197.6427 0.64274463 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 8 0 1 68.374 68.374 3 0.0076752 22558 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.013 21.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5075 2904 4893 11750 13539 13539 1 EMLQQSK Unmodified 862.42185 0.42185282 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 10 3 1 1 42.922 42.922 2 0.0080343 11412 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.56 46.268 167.3 379.1 579.26 481.85 613.57 616.76 158 376 577 483 628 595 1 2 2 2 2 2 56201 5076 1322;1354 4894 11751;11752 13540;13541 13540 2 EMLSSTTYPVVVK Unmodified 1452.7534 0.75341729 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8.5 2.22 1 1 2 1 1 67.122 67.122 2;3 4.0271E-33 21956 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 185.77 145.77 504.03 825.61 1094 479.28 744.38 843.34 474 818 1073 476 742 806 5 7 7 4 6 5 147150 5077 1282 4895 11753;11754;11755;11756;11757;11758 13542;13543;13544;13545;13546;13547;13548;13549 13547 8 EMLSSTTYPVVVK Oxidation (M) 1468.7483 0.74833192 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 1 0 7 0 1 60.823 60.823 3 0.0058066 19616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.6 29.219 69.32 43.694 34.466 58.299 45.438 0 65 46 37 56 46 0 1 1 1 1 1 0 4405 5078 1282 4895 11759 13550 13550 60 1 EMLTLPTFPVVVK Unmodified 1472.8313 0.83127368 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 10.7 1.49 1 1 2 2 2 1 88.541 88.541 2;3;4 7.2151E-15 28266 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 134.57 108.05 168.45 172.29 153.13 230.24 489.03 300.64 158 167 148 222 482 287 4 4 3 4 6 4 302980 5079 2173 4896 11760;11761;11762;11763;11764;11765;11766;11767;11768 13551;13552;13553;13554;13555;13556;13557;13558;13559;13560;13561;13562;13563 13558 13 EMLTLPTFPVVVK Oxidation (M) 1488.8262 0.82618831 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 1 0 9.5 0.5 3 3 86.955 86.955 3 1.1377E-05 28250 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.69 50.252 19 117.03 83.975 117.02 34.165 197.59 19 111 85 113 37 188 1 4 3 5 2 6 8621.9 5080 2173 4896 11769;11770;11771;11772;11773;11774 13564;13565;13566;13567;13568;13569;13570;13571;13572;13573 13573 164 10 EMLTQELENLK Unmodified 1346.6752 0.67516697 324 F8VPV0;A0A1W2P737;P48725 Pcnt Pericentrin yes no 0 0 0 0 5 0 1 63.482 63.482 3 0.033831 22381 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.188 21.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5081 324 4897 11775 13574 13574 1 EMMLSIINSSITTK Unmodified 1566.7997 0.79971556 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 11 0 1 82.946 82.946 3 7.1174E-05 25968 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.91 50.684 69.745 0 0 59.518 89.873 136.02 65 0 0 56 93 130 1 0 0 1 1 1 8574.8 5082 1827 4898 11776 13575 13575 1 EMNIQQLTTYR Unmodified 1395.6816 0.68164933 1892 Q08331 Calb2 Calretinin yes yes 0 0 0 0 9.5 3.5 1 1 62.21 62.21 2 0.0045197 21257 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.132 36.828 59.33 86.412 96.49 57.326 161.35 37.27 56 84 93 56 158 37 2 2 2 2 3 1 13534 5083 1892 4899 11777;11778 13576;13577;13578 13576 3 EMQNLSQHGR Unmodified 1198.5513 0.55130386 2575 Q8K021;Q3TSA8;D3YTP4 Scamp1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 0 4.5 0.5 1 1 29.812 29.812 3 0.0057095 6381 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.293 43.284 59.747 0 57.381 67.625 0 29.848 56 0 56 65 0 28 2 0 1 1 0 1 4582.4 5084 2575 4900 11779;11780 13579;13580 13580 2 EMQPTHPIR Oxidation (M) 1123.5444 0.54442757 1005;1773;2944 Q9CQV8;P63101;F6VW30;P68254;F6YY69 Ywhab;Ywhaz;Ywhaq 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein theta no no 0 0 1 0 7 3.89 1 1 2 1 2 27.473 27.473 3 0.0061583 5400 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.243 44.914 335.62 256.59 272.25 372.67 458.37 356.29 315 260 269 361 464 343 6 6 6 8 8 6 39512 5085 2944;1773;1005 4901 11781;11782;11783;11784;11785;11786;11787 13581;13582;13583;13584;13585;13586;13587;13588;13589 13589 47 9 EMQPTHPIR Unmodified 1107.5495 0.54951295 1005;1773;2944 Q9CQV8;P63101;F6VW30;P68254;F6YY69 Ywhab;Ywhaz;Ywhaq 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein theta no no 0 0 0 0 6.25 3.96 1 1 1 1 31.649 31.649 2;3 8.4853E-05 7165 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.97 79.811 177.93 262.96 100.38 174.26 319.53 78.884 167 260 103 167 317 74 2 4 2 3 4 1 206870 5086 2944;1773;1005 4901 11788;11789;11790;11791 13590;13591;13592;13593;13594 13594 5 EMQYFMQQWTGTNK Unmodified 1790.7756 0.77562607 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 9 0 1 78.255 78.255 3 7.7539E-05 26529 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.156 54.792 59.744 0 57.763 56.743 54.339 47.485 56 0 56 56 56 46 1 0 1 1 1 1 6113.9 5087 1382 4902 11792 13595 13595 1 EMSEDLPYEVR Unmodified 1366.6075 0.60748134 2660 Q8R3P0;B0QZP3;V9GXG0 Aspa Aspartoacylase yes no 0 0 0 0 2.5 0.5 1 1 58.384 58.384 2 0.00023501 20030 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.342 56.34 69.323 26.992 48.003 9.837 0 0 65 28 46 9 0 0 2 1 1 1 0 0 5064.6 5088 2660 4903 11793;11794 13596;13597 13596 2 EMTETMER Unmodified 1025.4158 0.41578116 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 2.5 0.5 1 1 38.299 38.299 2 0.014296 11061 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.676 52.555 0 28.843 56.772 46.894 38.761 68.184 0 28 56 46 38 65 0 1 1 1 1 2 5482.5 5089 728 4904 11795;11796 13598;13599 13598 2 EMWAQIQK Oxidation (M) 1048.5012 0.50116577 3433 yes no 0 0 1 0 5 0 1 55.005 55.005 3 0.049067 18482 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.405 8.5758 39.516 36.703 0 39.404 55.136 47.463 37 37 0 37 56 46 1 1 0 1 1 1 3084 + 5090 3433 4905 11797 13600 13600 204 1 EMYTLGITNFPIPGEPGFPLNAIYAK Unmodified 2852.4459 0.44588931 1126 H7BWZ3;Q9JM76;D3Z2F7;D3Z2F8;A0A0G2JFK7 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 9.75 1.92 1 2 1 102.36 102.36 3;4 1.3302E-11 36045 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.954 51.766 5 15.384 0 19.401 28.515 34.764 5 15 0 18 29 33 1 2 0 2 2 2 12548 5091 1126 4906 11798;11799;11800;11801 13601;13602;13603;13604;13605 13601 5 ENAPAIIFIDEIDAIATK Unmodified 1943.0252 0.025158703 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 7.2 2.99 2 1 1 1 105.55 105.55 3 2.9105E-07 37349 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.436 67.358 10.71 8.0653 8.3194 9.4614 9.9601 15.88 10 8 8 9 10 15 3 3 2 4 3 3 12053 5092 237 4907 11802;11803;11804;11805;11806 13606;13607;13608;13609;13610;13611 13610 6 ENCLILAVSPANSDLANSDALK Unmodified 2314.1475 0.14747546 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 7 2.56 2 2 2 1 78.247 78.247 3;4 2.7254E-12 28583 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.576 60.697 275.89 292.94 139.63 165.24 250.24 379.79 259 295 140 157 250 362 5 7 3 4 4 6 121330 5093 118;1534 4908 11807;11808;11809;11810;11811;11812;11813 13612;13613;13614;13615;13616;13617;13618 13614 7 ENCLILAVSPANSDLANSDALK Deamidation (N) 2315.1315 0.13149104 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 0 0 5.5 0.5 1 1 79.839 79.839 3;4 1.2508E-05 29367 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.359 38.932 0 19 57.459 46.038 43.335 77.647 0 19 55 46 46 74 0 1 1 1 1 1 10390 5094 118;1534 4908 11814;11815 13619;13620 13620 51;52 2 ENDAVTIQVLNQLIQK Unmodified 1824.9945 0.99452728 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 8 0 1 88.569 88.569 3 6.9884E-06 32093 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.82 56.981 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2390.3 5095 3174 4909 11816 13621 13621 1 ENDDVVSEDLVQQDVQDLYEAGELK Unmodified 2849.3091 0.3090573 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 2.5 1.12 1 1 1 1 90.557 90.557 4 3.9569E-23 31961 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.019 79.771 16.61 11.025 25.956 16.393 47.533 25.493 16 11 25 16 47 25 3 1 2 2 3 2 8230.5 5096 1050;1380 4910 11817;11818;11819;11820 13622;13623;13624;13625 13624 4 ENDQLDFIVETEGLK Unmodified 1748.8469 0.84685999 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 4 0 1 79.758 79.758 3 0.0046561 29835 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.723 31.37 0 0 0 20.608 8.4674 0 0 0 0 19 9 0 0 0 0 1 1 0 1759.6 5097 3195 4911 11821 13626 13626 1 ENDQLDFIVETEGLKK Unmodified 1876.9418 0.941823 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 1 13 0 1 72.539 72.539 4 0.046847 27210 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.41 14.128 78.146 51.515 167.47 0 151.92 84.143 74 56 158 0 148 83 1 1 1 0 1 1 6975.7 5098 3195 4912 11822 13627 13627 1 ENDTLTEIK Unmodified 1061.5241 0.52406928 3232 Q9JKK7 Tmod2 Tropomodulin-2 yes yes 0 0 0 0 3.5 0.5 1 1 52.659 52.659 2;3 0.00019387 17864 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.98 36.575 0 107.42 66.447 35.651 141.42 68.03 0 102 65 37 139 65 0 2 1 1 2 1 23515 5099 3232 4913 11823;11824 13628;13629 13628 2 ENEESIVEAPK Unmodified 1243.5932 0.59321148 2071 Q5U4C1 Gprasp1 G-protein coupled receptor-associated sorting protein 1 yes yes 0 0 0 0 2 0 1 50.139 50.139 3 0.0044959 16178 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.452 40.891 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 1432.1 5100 2071 4914 11825 13630 13630 1 ENEMDENLEQVSGIIGNLR Unmodified 2159.0165 0.016461285 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 6.4 3.38 2 1 1 1 83.714 83.714 3;4 7.8425E-14 31729 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.13 85.928 0 19.729 48.358 29.457 8.727 70.107 0 19 47 28 9 66 0 1 2 1 1 3 39332 5101 1681 4915 11826;11827;11828;11829;11830 13631;13632;13633;13634;13635 13632 5 ENENVINEYSSILEDQR Unmodified 2050.9443 0.9443422 2580 Q8K0E8 Fgb Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 0 0 0 0 2.5 0.5 1 1 73.667 73.667 3 6.0577E-18 27567 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.32 91.972 0 7.334 6.8171 7.1131 6.9953 0 0 7 7 7 7 0 0 1 1 1 1 0 5333.6 5102 2580 4916 11831;11832 13636;13637 13637 2 ENEVLEAWK Unmodified 1116.5451 0.54513908 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.6 3.26 1 2 1 1 65.43 65.43 2;3 0.00028405 23227 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.97 71.582 265 381.36 519.92 214.08 372.32 348.31 250 380 509 212 371 335 3 4 5 3 5 5 73527 5103 2148 4917 11833;11834;11835;11836;11837 13638;13639;13640;13641;13642;13643 13639 6 ENEVLEAWK Deamidation (N) 1117.5292 0.52915466 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 4 0 1 68.802 68.802 3 0.020501 24772 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.426 32.328 0 9.0786 29.751 0 29.288 0 0 9 28 0 28 0 0 1 1 0 1 0 1279.6 5104 2148 4917 11838 13644 13644 838 1 ENFIPTIVNFSAEEISDAIR Unmodified 2264.1325 0.13247732 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 8.67 3.09 1 1 1 102.02 102.02 3 8.4098E-11 37542 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.635 63.702 65.316 27.124 0 9 49.162 14.33 61 28 0 9 47 14 3 1 0 1 2 2 7873.8 5105 3204 4918 11839;11840;11841 13645;13646;13647;13648;13649 13646 5 ENFSCLTR Unmodified 1025.46 0.46002924 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 8 3.56 1 1 1 47.371 47.371 2 0.0013012 14777 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.56 121.62 276.84 456.95 776.27 751.25 600.86 454.03 260 445 775 740 607 442 2 3 4 4 3 3 308150 5106 1373 4919 11842;11843;11844 13650;13651;13652;13653 13650 4 ENFSGGTSLWQNI Unmodified 1451.6681 0.66810776 103 E9Q1T1;A0A0G2JGS4;Q6PHZ2 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 6 0 1 83.279 83.279 2 0.051928 30965 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.257 23.109 20.387 0 0 40.441 0 39.442 19 0 0 37 0 37 1 0 0 1 0 1 2078 5107 103 4920 11845 13654 13654 1 ENGGLDSEESYPYEAK Deamidation (N) 1787.7374 0.73736912 350 A0A1Y7VP49;A0A1Y7VNM3;P06797 Ctsl Cathepsin L1;Cathepsin L1 heavy chain;Cathepsin L1 light chain yes no 0 1 0 0 1.5 0.5 1 1 57.553 57.553 3 2.809E-05 19617 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.58 84.439 30.044 0 0 20.767 0 58.63 28 0 0 19 0 55 1 0 0 1 0 2 6866.9 5108 350 4921 11846;11847 13655;13656 13656 96 2 ENGGLDSEESYPYEAK Unmodified 1786.7534 0.75335353 350 A0A1Y7VP49;A0A1Y7VNM3;P06797 Ctsl Cathepsin L1;Cathepsin L1 heavy chain;Cathepsin L1 light chain yes no 0 0 0 0 2 0 1 54.687 54.687 3 0.00074144 18279 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.395 41.477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5109 350 4921 11848 13657 13657 1 ENGINGELTSADRETAEEVSAR Deamidation (N) 2348.0728 0.07279019 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;F7ALC8;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 1 0 1 1 0 1 52.165 52.165 3 8.2808E-11 15958 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.438 47.876 9.477 0 30.248 0 18.208 48.516 9 0 28 0 19 46 1 0 1 0 1 1 3371.5 5110 1424 4922 11849 13658 13658 523 1 ENGTITAANASTLNDGAAALVLMTAEAAQR Deamidation (N) 2945.44 0.44002866 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 1 0 0 5.5 0.5 2 2 94.705 94.705 3;4 8.87E-38 35486 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.24 115.06 2.136 4.984 0 5.465 5 0 2 5 0 5 5 0 1 2 0 1 1 0 7139.8 5111 2622 4923 11850;11851;11852;11853 13659;13660;13661;13662 13660 954 4 ENIFAIQTLK Unmodified 1175.655 0.65502388 2549 Q8CHU3 Epn2 Epsin-2 no no 0 0 0 0 9 0 1 73.142 73.142 3 0.060222 24087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.426 9.9443 49.011 0 58.26 46.806 0 69.29 46 0 56 46 0 65 1 0 1 1 0 1 5377.6 5112 2549 4924 11854 13663 13663 1 ENIIAVATTNNLYIFQDK Unmodified 2066.0684 0.068420501 2211 Q6P1F6 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 0 9 0 1 86.71 86.71 3 4.562E-05 30367 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.578 37.988 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2350.4 5113 2211 4925 11855 13664 13664 1 ENISEWR Unmodified 932.43519 0.4351947 1064 G3UXL2;Q9D7G0 Prps1l3;Prps1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 0 4 0 1 47.198 47.198 2 0.027459 14917 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.806 39.276 68.688 112.09 82.735 0 0 0 65 111 83 0 0 0 1 1 1 0 0 0 14067 5114 1064 4926 11856 13665 13665 1 ENIVEAIIHSPELIR Unmodified 1731.9519 0.95193418 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 6.5 0.5 1 1 82.633 82.633 3 0.00015827 30671 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.576 31.883 80.154 63.755 0 29.914 84.784 19.208 75 65 0 28 83 19 2 2 0 1 2 1 8102.9 5115 3164 4927 11857;11858 13666;13667 13666 2 ENIWDGVTTK Unmodified 1161.5666 0.5666028 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 6 0.816 1 1 1 63.37 63.37 2 4.3824E-05 21660 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.09 77.382 118.42 69.82 55.721 146.41 116.79 58.498 111 74 56 139 120 56 2 2 1 2 2 1 13248 5116 1796 4928 11859;11860;11861 13668;13669;13670 13669 3 ENKPYALNLEK Unmodified 1317.6929 0.69286595 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 1 7.5 0.5 1 1 54.617 54.617 3 0.0091309 15944 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.595 31.457 98.857 51.022 199.13 162.09 455.55 102.45 93 56 194 167 446 102 1 1 2 2 2 1 14548 5117 1882 4929 11862;11863 13671;13672 13672 2 ENLATVEGNFASIDAR Unmodified 1705.8271 0.8271276 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 4 0.816 1 1 1 67.608 67.608 2;3 4.2048E-44 24264 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.84 122.61 40.774 0 0 40.822 37.873 0 38 0 0 38 38 0 2 0 0 2 2 0 7043.7 5118 2844 4930 11864;11865;11866 13673;13674;13675 13674 3 ENLEEEAIIMK Unmodified 1317.6486 0.64861787 3188 Q9ERS2 Ndufa13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 0 0 0 0 3 0 1 67.696 67.696 3 0.00061267 24797 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.848 34.582 39.219 26.164 58.824 0 19.874 0 37 28 56 0 19 0 1 1 1 0 1 0 3448.7 5119 3188 4931 11867 13676 13676 1 ENLEFIDVHVK Unmodified 1341.6929 0.69286595 3035 Q9D154 Serpinb1a Leukocyte elastase inhibitor A yes yes 0 0 0 0 6 0 1 64.424 64.424 3 0.051237 22094 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.577 8.5145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5120 3035 4932 11868 13677 13677 1 ENLEQAFEVAER Unmodified 1433.6787 0.67867245 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 3.5 0.5 1 1 65.909 65.909 3 0.0025899 23510 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.524 29.308 0 19 0 9.837 0 9.594 0 19 0 9 0 9 0 1 0 1 0 1 3534.1 5121 581 4933 11869;11870 13678;13679 13679 2 ENLLEEQGSIALR Unmodified 1470.7678 0.7678218 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.8 3.66 1 2 1 1 64.588 64.588 2;3 1.154E-20 22868 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 154.09 110.46 59.908 49.229 76.793 59.131 95.203 77.366 56 47 75 56 98 74 2 2 3 2 3 2 65077 5122 551 4934 11871;11872;11873;11874;11875 13680;13681;13682;13683;13684;13685;13686 13681 7 ENLLEEQGSIALR Deamidation (N) 1471.7518 0.75183739 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 4 0 1 66.944 66.944 3 0.02209 24014 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.112 23.259 20.27 0 19.59 19.439 8.521 0 19 0 19 19 9 0 1 0 1 1 1 0 1350.2 5123 551 4934 11876 13687 13687 148 1 ENMAYTVEGIR Unmodified 1281.6023 0.60233638 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 0 6.2 3.43 2 2 1 55.052 55.052 2;3 3.4263E-13 18751 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 150.09 104.41 345.66 106.15 277.69 233.09 416.87 281.02 324 112 270 232 418 269 5 3 3 4 7 4 40586 5124 3117 4935 11877;11878;11879;11880;11881 13688;13689;13690;13691;13692;13693;13694 13688 7 ENMYAVQTLK Unmodified 1195.5907 0.59070906 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 6 0 1 58.11 58.11 3 0.019316 19267 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.288 30.656 49.137 0 37.195 58.161 44.133 38.183 46 0 37 56 46 37 1 0 1 1 1 1 4179.6 5125 2324 4936 11882 13695 13695 1 ENNAVYAFLGLTAPPGSK Unmodified 1847.9418 0.94176342 3219 Q9JJU8 Sh3bgrl SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 0 0 9 0 1 84.809 84.809 3 3.5116E-05 29515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.25 46.175 0 48.944 0 40.441 0 0 0 46 0 37 0 0 0 1 0 1 0 0 10586 5126 3219 4937 11883 13696 13696 1 ENPAELAER Unmodified 1027.4934 0.49343786 2263 Q6ZQ18;A0A1W2P7T9 Efr3b Protein EFR3 homolog B yes no 0 0 0 0 2 0 1 42.169 42.169 2 0.043412 12773 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.347 28.651 0 19.751 27.822 28.946 0 0 0 19 28 28 0 0 0 1 1 1 0 0 2783.7 5127 2263 4938 11884 13697 13697 1 ENPETEEDVGPIVQHIYELR Unmodified 2366.139 0.13901926 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 0 3 0 1 72.282 72.282 3 0.014802 26878 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.79 25.081 20.297 17.783 0 0 0 0 19 18 0 0 0 0 1 1 0 0 0 0 1442.3 5128 1547 4939 11885 13698 13698 1 ENPIEDDLIFR Unmodified 1359.667 0.66704513 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 3.5 0.5 1 1 73.466 73.466 2 0.00073621 27491 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.961 60.467 9.477 0 74.69 22.49 48.116 0 9 0 70 23 46 0 1 0 2 1 1 0 7950 5129 3195 4940 11886;11887 13699;13700 13699 2 ENPLLPEEEEQR Unmodified 1481.6998 0.69980182 1022 F7CBP1;G3XA17;Q62448 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 2 0 1 52.898 52.898 2 0.0010991 17441 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.531 53.288 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 2206.5 5130 1022 4941 11888 13701 13701 1 ENPSEEAQNLVEFTDEEGYGR Unmodified 2412.0353 0.035342051 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 0 0 0 0 1.5 0.5 1 1 72.472 72.472 3 1.0942E-11 24549 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.54 95.824 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 9679.4 5131 3066 4942 11889;11890 13702;13703 13702 2 ENPTTFMGHYLHEVAR Unmodified 1900.889 0.88901635 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6.5 0.5 1 1 59.835 59.835 4 0.00016421 19974 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.943 48.874 99.308 66.1 24.865 68.045 80.733 86.174 93 65 28 65 83 83 2 1 1 2 2 2 15184 5132 1321 4943 11891;11892 13704;13705 13704 2 ENPYYDSR Unmodified 1042.4356 0.43558863 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 36.924 36.924 2 0.00050426 9662 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.06 87.854 347.25 284.33 427.23 360.56 567.27 482.47 325 278 417 351 574 464 4 4 4 3 7 5 308310 5133 2185 4944 11893;11894;11895;11896;11897 13706;13707;13708;13709;13710;13711;13712 13710 7 ENQEFVNFR Unmodified 1181.5465 0.54653606 1238 O55126;Q7TMG8 Gbas Protein NipSnap homolog 2 yes no 0 0 0 0 4 0 1 52.961 52.961 2 0.0042988 17688 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.258 53.392 0 0 0 71.045 0 59.696 0 0 0 65 0 56 0 0 0 1 0 1 3576.5 5134 1238 4945 11898 13713 13713 1 ENQEVILEEVR Unmodified 1356.6885 0.68850885 1262 O88307 Sorl1 Sortilin-related receptor yes yes 0 0 0 0 2 0 1 57.049 57.049 2 0.0011813 19349 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.944 45.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5135 1262 4946 11899 13714 13714 1 ENQLLAQEAEFFQLK Unmodified 1806.9152 0.91521432 3083 Q9D7X1 Kctd4 BTB/POZ domain-containing protein KCTD4 yes yes 0 0 0 0 5.5 0.5 1 1 86.164 86.164 3 2.0949E-05 32220 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.39 74.05 39.289 9.256 88.429 38.29 18.989 50.102 37 9 84 38 19 47 2 1 3 2 1 2 3737.1 5136 3083 4947 11900;11901 13715;13716;13717 13717 3 ENQPESPSAR Unmodified 1113.5051 0.50506518 535 A2BE28 Las1l Ribosomal biogenesis protein LAS1L yes yes 0 0 0 0 1 0 1 25.683 25.683 2 0.00081455 4736 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.297 52.317 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 1432.6 5137 535 4948 11902 13718 13718 1 ENQWCEEK Unmodified 1121.4448 0.44477311 3325 Q9WTX5 Skp1 S-phase kinase-associated protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 44.551 44.551 2 0.015052 14177 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.939 43.428 58.885 25.821 0 0 0 49.036 55 28 0 0 0 46 1 1 0 0 0 1 3376.8 5138 3325 4949 11903;11904 13719;13720 13719 2 ENSIDILSSTIK Unmodified 1318.698 0.6980109 434 A2A8E2;B7ZC72;B7ZC71;Q8BHG2 0610037L13Rik UPF0587 protein C1orf123 homolog yes no 0 0 0 0 6 0 1 71.524 71.524 3 0.0043583 25513 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.754 27.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5139 434 4950 11905 13721 13721 1 ENSSAGSTVR Unmodified 1006.468 0.46795139 215 A0A0R4J1Y6;E9PUC4;Q6NSW3 Sphkap A-kinase anchor protein SPHKAP yes no 0 0 0 0 2.5 0.5 1 1 22.259 22.259 2 0.013453 3880 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.48 25.6 14 5.1624 9.4283 0 0 0 14 5 9 0 0 0 1 1 1 0 0 0 1480 5140 215 4951 11906;11907 13722;13723 13722 2 ENSVVPVEE Unmodified 1000.4713 0.47130543 296 A0A1L1SRT9;H3BKP5;H3BJR6;Q8BHK2 Scn3b Sodium channel subunit beta-3 yes no 0 0 0 0 1 0 1 53.919 53.919 2 0.0020782 16653 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.783 70.824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5141 296 4952 11908 13724 13724 1 ENTDNIQLEVAR Unmodified 1400.6896 0.68957148 672 Q80TS3;D3YU23;D3Z4S7;D3YVT9;D3YTW7;D3Z3G4;D3Z593;D3Z634;D3Z6H7;D3Z3X6;D3Z6H9;D3YWB1;D3Z4V0;D3YWR3;D3Z6J2;D3Z5M6;K3W4M8;F6WMY5 Lphn3;Adgrl3 Latrophilin-3 yes no 0 0 0 0 3 0 1 51.051 51.051 2 0.063986 17189 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.915 18.485 0 29.478 18.789 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 2478.9 5142 672 4953 11909 13725 13725 1 ENTEFSELELQEWYK Unmodified 1943.8789 0.8788884 1832 P84075;E9PV73;A2A7R5;A2A7R6 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 0 3.8 0.748 2 2 1 79.89 79.89 2;3;4 2.0278E-05 29997 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.911 58.832 68.674 121.92 140.67 46.443 149.38 126.36 65 121 139 47 149 122 2 3 4 2 5 4 51507 5143 1832 4954 11910;11911;11912;11913;11914 13726;13727;13728;13729;13730;13731 13730 6 ENTEFSELELQEWYK Deamidation (N) 1944.8629 0.86290398 1832 P84075;E9PV73;A2A7R5;A2A7R6 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 1 0 0 4 0 1 83.425 83.425 3 0.014959 31640 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.434 28.356 20.346 8.2041 0 0 9.414 0 19 9 0 0 9 0 1 1 0 0 1 0 1643.3 5144 1832 4954 11915 13732 13732 743 1 ENTEGEYSGIEHVIVDGVVQSIK Unmodified 2501.2286 0.22856255 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 6.5 3.1 2 1 1 1 1 82.993 82.993 3;4 1.9132E-18 31539 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.74 87.116 98.973 73.321 133.41 162.68 65.235 270.62 93 74 130 158 65 259 3 2 4 6 1 5 57306 5145 307 4955 11916;11917;11918;11919;11920;11921 13733;13734;13735;13736;13737;13738;13739;13740 13734 8 ENTEGEYSSLEHESVAGVVESLK Unmodified 2492.1555 0.15545719 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 4 0.707 1 2 1 72.603 72.603 3;4 4.9391E-28 26508 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.83 109.43 109.1 67.678 26.432 69.395 45.497 117.03 102 65 28 65 47 111 3 2 2 2 2 3 30759 5146 1814 4956 11922;11923;11924;11925 13741;13742;13743;13744 13743 4 ENTLATK Unmodified 775.40758 0.40758296 992;528 F6RK07;A2AUX5;A2AUX3;B7ZD29;Q3UHC7;F6QQP6;F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Dab2ip;Syngap1 Disabled homolog 2-interacting protein;Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 6 0 1 39.504 39.504 3 0.02475 10488 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.973 0 48.728 74.74 42.464 57.866 43.12 68.06 46 74 46 56 46 65 1 1 1 1 1 1 1579.7 5147 528;992 4957 11926 13745 13745 1 ENTQTTIK Unmodified 933.47673 0.47672516 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;H3BJS9 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 7 3.54 1 1 1 1 37.038 37.038 2;3 0.0029917 9325 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.948 21.985 481.68 511.65 483.7 546.18 169.47 498.32 454 519 491 529 176 472 4 4 3 4 1 3 46228 5148 613 4958 11927;11928;11929;11930 13746;13747;13748;13749 13748 4 ENVFPGSTTR Unmodified 1106.5356 0.53563702 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 7.75 3.11 1 1 1 1 45.211 45.211 2 3.9664E-05 13126 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.34 95.907 256.47 289.32 188.11 321.02 146.32 207.07 241 288 195 306 148 195 3 4 2 4 3 2 58536 5149 1783 4959 11931;11932;11933;11934 13750;13751;13752;13753;13754 13752 5 ENVIMTQILPCIK Unmodified 1557.8259 0.82587073 2272 Q76MZ3;G3UWL2 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 0 10 2.16 1 1 1 81.359 81.359 3 3.408E-07 27953 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.566 56.269 88.42 0 107.38 56.938 43.859 96.82 83 0 102 56 46 92 2 0 2 1 1 2 14432 5150 2272 4960 11935;11936;11937 13755;13756;13757 13756 3 ENVIYILAAR Unmodified 1160.6554 0.65535823 2303 Q80TL4;S4R1R0 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 8 0 1 72.6 72.6 2 0.00018556 24532 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.254 51.441 0 78.736 0 99.594 109.26 66.172 0 74 0 93 111 65 0 1 0 1 1 1 9513.1 5151 2303 4961 11938 13758 13758 1 ENVLIGEGAGFK Unmodified 1232.6401 0.6401021 1551 P45952 Acadm Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 6 0 1 65.179 65.179 2 0.00053695 22457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.289 39.153 29.904 27.776 0 30.079 27.906 0 28 28 0 28 28 0 1 1 0 1 1 0 3061.3 5152 1551 4962 11939 13759 13759 1 ENVNVEEMFNCITELVLR Unmodified 2208.0555 0.055489329 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 111.51 111.51 3 9.3462E-08 37077 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.1 80.004 9.6046 1.984 9.1892 11.475 2.092 0 9 2 9 11 2 0 2 1 2 2 1 0 8257.8 5153 2250 4963 11940;11941;11942;11943 13760;13761;13762;13763 13761 4 ENVPVTEDNFVR Unmodified 1417.6838 0.68375782 781 D3Z6I4;Q921W4;D3YU21;D3YZD6;A0A338P6Y1 Cryzl1 Quinone oxidoreductase-like protein 1 yes no 0 0 0 0 2.5 0.5 1 1 53.89 53.89 2 0.00018678 18458 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.803 44.038 39.464 20.08 47.968 8.9862 19.461 0 37 19 46 9 19 0 1 1 2 1 1 0 6463.4 5154 781 4964 11944;11945 13764;13765 13765 2 ENYGELADCCTK Unmodified 1458.5755 0.57552928 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6.25 3.96 1 1 1 1 50.235 50.235 2;3 7.2102E-14 16420 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 131.79 108.28 178.06 142.83 179.14 137.25 270.78 151.11 167 139 176 140 269 148 3 3 3 4 3 2 36799 5155 1321 4965 11946;11947;11948;11949 13766;13767;13768;13769 13767 4 EPAAETEALLGMDLVR Oxidation (M) 1729.8557 0.85565053 3001 Q9CZC8 Scrn1 Secernin-1 yes yes 0 0 1 0 3 0 1 73.259 73.259 3 0.001602 27419 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.501 25.525 9.612 8.9279 0 9.4841 18.761 19.719 9 9 0 9 19 19 1 1 0 1 1 1 1109.4 5156 3001 4966 11950 13770 13770 189 1 EPAAETEALLGMDLVR Unmodified 1713.8607 0.86073591 3001 Q9CZC8 Scrn1 Secernin-1 yes yes 0 0 0 0 4.5 0.5 1 1 81.352 81.352 2;3 2.2819E-16 30594 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.53 101.68 59.368 54.328 74.944 44.137 44.495 58.426 56 56 74 46 46 56 1 1 1 2 1 1 10717 5157 3001 4966 11951;11952 13771;13772 13771 2 EPAGLEQILK Unmodified 1096.6128 0.61282471 2723 Q8VI75;Q5U4C5;D6RES6 Ipo4 Importin-4 yes no 0 0 0 0 6 0 1 61.156 61.156 2 0.011689 20635 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.159 6.7477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5158 2723 4967 11953 13773 13773 1 EPALLELEGK Unmodified 1097.5968 0.5968403 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 5 0 1 69.167 69.167 3 0.0020256 24957 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.056 36.583 0 38.766 36.002 38.295 0 39.442 0 37 37 37 0 37 0 1 1 1 0 1 3348.1 5159 1536 4968 11954 13774 13774 1 EPANIGVTK Unmodified 927.50255 0.50254598 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 7 0 1 47.689 47.689 3 0.049226 13422 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.715 14.978 49.358 0 0 0 56.581 58.081 46 0 0 0 56 56 1 0 0 0 1 1 2021.3 5160 2963 4969 11955 13775 13775 1 EPASGTNQR Unmodified 958.44682 0.44682202 2997 Q9CZ04 Cops7a COP9 signalosome complex subunit 7a yes yes 0 0 0 0 2.5 0.5 1 1 20.922 20.922 2 0.0090415 3397 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.605 38.186 24.548 8.6899 14.579 9.2942 28.861 0 23 9 14 9 28 0 2 1 1 1 1 0 2668 5161 2997 4970 11956;11957 13776;13777 13776 2 EPATINYPFEK Unmodified 1307.6398 0.63976774 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 6 0 1 64.212 64.212 2 6.4827E-08 21961 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.25 102.04 49.358 0 0 0 85.547 37.001 46 0 0 0 83 37 1 0 0 0 1 1 10294 5162 2614 4971 11958 13778 13778 1 EPCGGQNTVPGVR Unmodified 1369.6408 0.64084715 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 40.086 40.086 2;3 3.8885E-11 11327 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.26 84.899 20.387 19.431 46.968 36.773 46.163 95.379 19 19 46 37 47 93 1 1 1 1 1 3 23779 5163 3258 4972 11959;11960;11961;11962 13779;13780;13781;13782 13782 4 EPCGTPEYLAPEVVGR Unmodified 1772.8403 0.84033482 1986 Q3UHL1 Camkv CaM kinase-like vesicle-associated protein yes yes 0 0 0 0 3.5 0.5 1 1 61.777 61.777 2;3 1.0345E-05 22052 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.772 56.971 39.522 0 30.097 0 0 9 37 0 28 0 0 9 1 0 1 0 0 1 9435.8 5164 1986 4973 11963;11964 13783;13784 13783 2 EPCLHPLEPDEVEYEPR Unmodified 2107.9521 0.95207011 2488 Q8C129 Lnpep Leucyl-cystinyl aminopeptidase yes yes 0 0 0 0 2 0 1 57.552 57.552 3 0.030841 19594 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 33.697 17.298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5165 2488 4974 11965 13785 13785 1 EPECIHVMR Unmodified 1169.5321 0.53214833 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 3.5 0.5 1 1 40.458 40.458 3 0.00062275 12190 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.07 80.039 119.1 0 0 0 106.69 0 111 0 0 0 102 0 1 0 0 0 1 0 8105.3 5166 2585 4975 11966;11967 13786;13787 13786 2 EPEDAELVR Unmodified 1056.5088 0.50875357 1233 O55074;Q7TN79 Akap7 A-kinase anchor protein 7 isoform alpha;A-kinase anchor protein 7 isoform gamma yes no 0 0 0 0 1 0 1 44.567 44.567 2 0.00091007 12846 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.39 53.106 88.66 0 66.996 64.802 119.62 85.065 83 0 65 65 120 83 1 0 1 1 1 1 17068 5167 1233 4976 11968 13788 13788 1 EPEEPNGQIQGYR Deamidation (N) 1516.6794 0.67940073 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9 Ptprd Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 0 1 0 0 1 0 1 45.227 45.227 3 0.00024005 13202 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.17 66.491 9.4947 8.6015 19.994 0 0 20.254 9 9 19 0 0 19 1 1 1 0 0 1 3105.2 5168 642 4977 11969 13789 13789 183 1 EPEPTDTTTYK Unmodified 1280.5772 0.57722707 2419 Q8BK30 Ndufv3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes yes 0 0 0 0 3.25 0.829 1 1 2 45.071 45.071 2;3 1.7614E-07 13895 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.83 79.627 0 125.47 220.13 160.2 199.39 264.29 0 121 217 162 204 255 0 2 3 3 2 4 18855 5169 2419 4978 11970;11971;11972;11973 13790;13791;13792;13793 13792 4 EPETQPVCFFR Unmodified 1408.6445 0.64453555 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 5 0 1 62.215 62.215 3 0.0057277 21786 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.028 36.774 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2654.5 5170 2077 4979 11974 13794 13794 1 EPFELEAFYTNLHEVPYPDPR Unmodified 2562.2067 0.2067049 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 6 0 1 82.205 82.205 3 0.00044417 30503 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.172 22.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5171 1581 4980 11975 13795 13795 1 EPFLQQLK Unmodified 1001.5546 0.55458155 2624 Q8QZY1 Eif3l Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 0 8 0 1 65.656 65.656 2 0.028442 21274 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.248 30.002 69.322 43.701 34.033 67.998 54.151 37.897 65 46 37 65 56 37 1 1 1 1 1 1 1757.9 5172 2624 4981 11976 13796 13796 1 EPFNIDVDHR Unmodified 1240.5836 0.58364985 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 4 0 1 51.993 51.993 3 0.049788 17262 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.266 34.464 0 0 0 20.767 0 20.254 0 0 0 19 0 19 0 0 0 1 0 1 3426.5 5173 970 4982 11977 13797 13797 1 EPFPTIYVDSQK Unmodified 1422.7031 0.70309628 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 6 0 1 69.188 69.188 3 0.000123 24401 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.137 57.7 127.96 34.976 105.56 46.349 45.781 67.984 120 37 102 46 46 65 2 1 2 1 1 1 4753 5174 2441 4983 11978 13798;13799 13799 2 EPFPTIYVDSQKENER Unmodified 1950.9323 0.93232095 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 5 0 1 60.837 60.837 3 0.00073989 21157 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.52 48.29 29.483 56.823 46.214 0 47.137 28.503 28 56 46 0 46 28 1 1 1 0 1 1 6751 5175 2441 4984 11979 13800 13800 1 EPFTLEAYYSSPQDLPYPDPAIAQFSVQK Unmodified 3300.5867 0.58667613 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 6 0 1 93.105 93.105 4 1.1543E-08 35233 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.372 52.184 24.612 28.132 0 0 0 49.036 23 28 0 0 0 46 1 2 0 0 0 2 1765.3 5176 1957 4985 11980 13801;13802 13802 2 EPGTVALVSK Unmodified 999.56006 0.56006086 2864 Q99LP6 Grpel1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 6 0 1 54.681 54.681 2 0.0048843 17579 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.943 40.358 49.063 0 49.525 0 48.116 0 46 0 46 0 46 0 1 0 1 0 1 0 2984 5177 2864 4986 11981 13803 13803 1 EPHKDQGSVAPGLPK Unmodified 1558.8104 0.81035532 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 5 0 1 46.708 46.708 4 0.0057768 14338 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.545 25.391 49.121 0 39.786 0 67.99 0 46 0 37 0 65 0 1 0 1 0 1 0 3500.1 5178 2295 4987 11982 13804 13804 1 EPIAASTNR Unmodified 957.48796 0.48795855 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4 0 1 33.363 33.363 2 0.026029 8404 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.828 25.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5179 551 4988 11983 13805 13805 1 EPIDIVEGIK Unmodified 1111.6125 0.61249036 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 72.476 72.476 2;3 0.00050339 26544 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.355 48.211 138.73 29.18 164.56 64.272 212.52 182.89 130 28 157 65 212 176 2 1 3 2 3 2 16827 5180 3397 4989 11984;11985;11986 13806;13807;13808 13806 3 EPIDIVEGIKK Unmodified 1239.7075 0.70745338 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 1 7 0 1 66.732 66.732 3 0.00099783 22372 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.182 44.879 78.027 80.324 163.1 59.253 110.09 95.997 74 83 158 65 111 93 1 1 1 1 1 1 6824.5 5181 3397 4990 11987 13809 13809 1 EPITVSSEQMSHFR Unmodified 1646.7723 0.77225526 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 0 5.5 0.5 1 1 51.691 51.691 3 2.6198E-32 16160 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 169.52 144.56 69.257 178.86 223.47 175.45 191.29 165.09 65 176 224 176 196 159 1 2 2 2 2 1 37822 5182 1296 4991 11988;11989 13810;13811 13811 2 EPLGFVK Unmodified 788.44324 0.44324019 2149 Q62277;F6VR28 Syp Synaptophysin yes no 0 0 0 0 10 3 1 1 59.898 59.898 2 0.036239 19493 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.297 20.335 167.06 0 234.84 101.41 241.74 165.55 157 0 222 102 241 158 2 0 2 1 2 1 27819 5183 2149 4992 11990;11991 13812;13813 13812 2 EPLGSQR Unmodified 785.40317 0.40316629 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4 0 1 30.625 30.625 2 0.051925 7070 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.035 31.062 0 0 28.57 38.738 0 0 0 0 28 37 0 0 0 0 1 1 0 0 9189.3 5184 1275 4993 11992 13814 13814 1 EPLPSLEAVYLITPSEK Unmodified 1885.0084 0.0084460064 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 0 5.67 0.471 1 2 86.438 86.438 3;4 2.2209E-06 32321 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.43 73.885 49.225 26.473 19.685 19.594 67.99 0 46 28 19 19 65 0 1 1 1 1 1 0 23893 5185 1160 4994 11993;11994;11995 13815;13816;13817 13817 3 EPMQTGIK Unmodified 902.45315 0.45315295 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7.75 3.11 1 1 1 1 46.224 46.224 2 0.0096034 14315 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.802 47.948 709.3 497.78 652.8 519.68 811.03 786.33 667 507 644 521 824 754 3 2 2 2 3 2 103000 5186 1881 4995 11996;11997;11998;11999 13818;13819;13820;13821 13818 4 EPNPPIDEVINTPGVVAR Unmodified 1916.0003 0.0003409361 2098 Q60960;G3UXT6;G3UZK5 Kpna1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed yes no 0 0 0 0 3 0 1 68.198 68.198 3 0.033575 25055 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.121 17.434 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1378.9 5187 2098 4996 12000 13822 13822 1 EPPLELK Unmodified 824.46437 0.46436956 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 5 0 1 57.509 57.509 2 0.048072 19551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.058 36.112 254.61 150.94 0 161.4 251.57 256.12 238 158 0 152 256 247 1 1 0 1 1 1 20428 5188 2971 4997 12001 13823 13823 1 EPPLELKDTDAAVGDNIGYITFVLFPR Unmodified 2989.5437 0.5436891 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 1 7 0 1 97.646 97.646 4 0.031353 35922 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 30.206 23.331 20.292 18.848 0 0 0 29.848 19 19 0 0 0 28 1 1 0 0 0 1 1534.5 5189 2971 4998 12002 13824 13824 1 EPPTDVTPTFLTTGVLSTLR Unmodified 2144.1365 0.13650007 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 8 0 1 87.989 87.989 3 0.0099129 31835 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.053 25.419 0 0 49.042 16.391 19.121 0 0 0 46 18 19 0 0 0 1 1 1 0 1821.8 5190 1925 4999 12003 13825 13825 1 EPQDPLK Unmodified 825.42323 0.42323303 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4 0 1 47.143 47.143 3 0.024752 14813 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.972 25.354 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 3254.7 5191 1275 5000 12004 13826 13826 1 EPQPAASEAFVK Unmodified 1272.635 0.63501672 944 E9QAC6;E9PUZ5;Q62083 Pick1 Galectin;PRKCA-binding protein yes no 0 0 0 0 5 0 1 53.735 53.735 3 0.0025899 17803 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.524 37.018 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 2137.6 5192 944 5001 12005 13827 13827 1 EPQTLDSQIQETN Unmodified 1501.6896 0.68963106 860 E9PZ43;A0A0G2JDN7;A0A0G2JFK3 Map4 Microtubule-associated protein yes no 0 0 0 0 3 0 1 53.895 53.895 2 0.0026238 18459 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.262 50.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5193 860 5002 12006 13828 13828 1 EPSAAPAR Unmodified 797.40317 0.40316629 959 Q0GNC1;E9QLA5;A0A1Y7VM80 Inf2 Inverted formin-2 yes no 0 0 0 0 3 0 1 26.657 26.657 2 0.024315 5826 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.692 28.879 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 2786.9 5194 959 5003 12007 13829 13829 1 EPSPPIDEVINTPGVVDR Unmodified 1932.9793 0.97927114 1189 Q4FJZ2;O35345 Kpna6 Importin subunit alpha;Importin subunit alpha-7 yes no 0 0 0 0 3 0 1 68.638 68.638 3 0.0011403 25299 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.663 22.376 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 3273.3 5195 1189 5004 12008 13830 13830 1 EPSSYDFVYHYG Unmodified 1462.6041 0.60411052 2406 Q8BHL5;F6YXR3 Elmo2 Engulfment and cell motility protein 2 yes no 0 0 0 0 5 0 1 63.928 63.928 2 0.0013782 22539 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.825 39.658 14.925 19.21 0 20.354 21.973 33.485 14 19 0 19 23 32 1 1 0 1 1 1 2885.7 5196 2406 5005 12009 13831 13831 1 EPTAPVSR Unmodified 855.44503 0.4450311 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 8.5 4.5 1 1 32.792 32.792 2 0.0068751 8181 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.93 71.488 128.4 68.053 126.19 0 84.521 166.02 120 65 121 0 83 158 1 1 2 0 1 2 16236 5197 2154 5006 12010;12011 13832;13833 13832 2 EPTPSEQVGPEGSGSAAGESRPILTEEER Unmodified 2995.4007 0.40066627 2812 Q922Y1 Ubxn1 UBX domain-containing protein 1 yes yes 0 0 0 1 1.5 0.5 1 1 49.453 49.453 4 1.2505E-33 14750 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.58 94.519 9.4035 28.855 18.146 34.631 18.936 0 9 28 19 33 19 0 1 1 1 2 1 0 13683 5198 2812 5007 12012;12013 13834;13835 13834 2 EPTPYPDER Unmodified 1102.4931 0.49310351 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4.75 4.82 1 1 1 1 38.494 38.494 2 9.8981E-05 11422 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.86 56.191 275.8 167.62 240.19 204.91 318.42 239.29 259 176 241 204 319 232 3 2 4 3 3 3 62188 5199 510 5008 12014;12015;12016;12017 13836;13837;13838;13839;13840 13839 5 EPTQADVEDQILGKEESLPEEESR Unmodified 2727.2723 0.27227786 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 1 3 0 1 68.054 68.054 4 1.1474E-06 24966 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.468 49.274 0 0 20.173 8.6347 0 39.442 0 0 19 9 0 37 0 0 1 1 0 1 3925.3 5200 1250 5009 12018 13841 13841 1 EPYPGSAEVIR Unmodified 1216.6088 0.60880197 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97;G3UWQ9;A0A0G2JE40 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 0 4 0 1 49.462 49.462 2 0.0030157 15952 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.849 29.826 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 3019.2 5201 2968 5010 12019 13842 13842 1 EQAAALPPALSHTPEVQGR Unmodified 1971.0174 0.017387984 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 0.816 1 1 1 52.22 52.22 3 3.8283E-07 17008 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.405 58.018 0 107.61 54.653 28.506 91.93 117.6 0 102 56 28 93 112 0 3 2 1 4 3 27444 5202 2186 5011 12020;12021;12022 13843;13844;13845;13846 13845 4 EQAADTEAAQEVTQLLVER Unmodified 2100.0335 0.033491558 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 78.855 78.855 3 5.2881E-27 29814 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 139.02 121.15 90.132 0 9.738 49.219 95.223 24.474 84 0 9 46 94 24 2 0 1 1 3 2 14424 5203 1220 5012 12023;12024;12025;12026 13847;13848;13849;13850 13848 4 EQADFALEALAK Unmodified 1304.6612 0.66123147 1149 Q6URW6;K3W4R2;A0A140LI60 Myh14 Myosin-14 yes no 0 0 0 0 5 0 1 74.59 74.59 3 0.016224 27530 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.405 0 69.273 24.138 58.794 0 0 0 65 28 56 0 0 0 1 1 1 0 0 0 1108.6 5204 1149 5013 12027 13851 13851 1 EQADYCVSHMKPYVDGK Unmodified 2025.8924 0.89244675 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 5.5 0.5 1 1 53.194 53.194 4 5.2733E-06 16771 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.809 57.686 178.19 166.46 234.5 183.99 225.22 231.53 167 167 232 185 231 222 2 2 2 3 3 2 13422 5205 551 5014 12028;12029 13852;13853;13854 13854 3 EQAEAEVASLNR Deamidation (N) 1316.6208 0.62082322 782;926 D3Z6I8;E9Q7Q3 Tpm3 no no 0 1 0 0 1 0 2 48.515 48.515 2 0.00088824 14997 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.067 12.986 20.178 18.532 58.557 18.43 18.867 49.564 19 19 56 19 19 47 1 1 2 1 1 2 5566.9 5206 782;926 5015 12030;12031 13855;13856 13856 206 2 EQAEAEVASLNR Unmodified 1315.6368 0.63680763 782;926 D3Z6I8;E9Q7Q3 Tpm3 no no 0 0 0 0 2.2 0.748 1 2 2 47.565 47.565 2;3 1.0704E-40 15456 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 195.09 12.858 108.51 173.66 256.75 208.27 82.154 236.4 102 171 256 203 83 223 3 4 5 4 2 4 216570 5207 782;926 5015 12032;12033;12034;12035;12036 13857;13858;13859;13860;13861 13861 5 EQAEAEVASLNRR Unmodified 1471.7379 0.73791866 782;926 D3Z6I8;E9Q7Q3 Tpm3 no no 0 0 0 1 3 0 1 42.554 42.554 3 2.0601E-07 13215 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.53 28.077 69.745 0 0 110.02 78.107 106.5 65 0 0 102 83 102 1 0 0 1 1 1 10238 5208 782;926 5016 12037 13862 13862 1 EQAELEAAR Unmodified 1015.4934 0.49343786 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1.5 0.5 1 1 36.819 36.819 2 0.0053357 9760 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.862 35.438 59.641 102.7 108.23 121.44 173.6 143.22 56 102 111 120 176 139 1 2 2 2 2 2 18656 5209 3266 5017 12038;12039 13863;13864 13863 2 EQAGEEEKEDAVR Unmodified 1488.6692 0.66922997 111 A0A0J9YTW6;B1AWN6 Scn2a1 Sodium channel protein yes no 0 0 0 1 1 0 1 35.615 35.615 3 0.022251 9303 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.14 24.578 49.273 16.894 0 50.278 0 49.036 46 19 0 46 0 46 1 1 0 1 0 1 8225.5 5210 111 5018 12040 13865 13865 1 EQAGGDATENFEDVGHSTDAR Unmodified 2204.9206 0.92064664 1097 G5E850;P56395;E0CY88 Cyb5a Cytochrome b5 yes no 0 0 0 0 1 0 1 43.91 43.91 3 3.0016E-11 12510 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.5 87.254 9.657 0 0 20.246 27.69 19.464 9 0 0 19 28 19 1 0 0 1 1 1 10490 5211 1097 5019 12041 13866 13866 1 EQAGTPASDGSR Unmodified 1174.5214 0.52144352 190 A0A1Y7VLC3;A0A0R4J0V4;Q9QXM1 Jmy Junction-mediating and -regulatory protein yes no 0 0 0 0 1 0 1 24.743 24.743 2 0.0011396 4421 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.085 40.521 20.292 18.848 0 0 29.288 0 19 19 0 0 28 0 1 1 0 0 1 0 1786.1 5212 190 5020 12042 13867 13867 1 EQALAVSR Unmodified 872.47158 0.4715802 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 7 3.54 1 1 1 1 37.528 37.528 2 5.5898E-05 10106 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 160.56 66.555 1659.5 1484.5 1887.1 1625.2 650.72 1824.5 1564 1530 1901 1601 673 1729 4 4 4 4 2 4 740540 5213 1741 5021 12043;12044;12045;12046 13868;13869;13870;13871 13869 4 EQALHQSTYQR Unmodified 1359.6531 0.6531264 2477 Q8BXR1 Slc7a14 Probable cationic amino acid transporter yes yes 0 0 0 0 5 0 1 30.338 30.338 3 0.00065396 6581 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.888 53.158 49.251 21.151 0 24.454 36.443 33.072 46 23 0 23 37 32 1 1 0 1 1 1 3354.1 5214 2477 5022 12047 13872 13872 1 EQAPDSVEGLLNALR Unmodified 1610.8264 0.82639932 2410 Q8BHZ0 Fam49a Protein FAM49A yes yes 0 0 0 0 5.5 0.5 1 1 82.266 82.266 3 0.00050339 31189 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.861 47.717 0 0 58.963 36.56 19.521 39.442 0 0 56 37 19 37 0 0 2 2 1 1 5074 5215 2410 5023 12048;12049 13873;13874 13873 2 EQAQSCR Unmodified 877.37121 0.37121423 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 2 0 1 16.657 16.657 2 0.0055659 2613 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 133.68 16.293 0 27.468 11.734 15.344 18.712 13.324 0 26 13 15 19 13 0 1 1 1 1 1 3146.1 5216 551 5024 12050 13875 13875 1 EQASHLGGAVFSGAGNIAAATGLVK Unmodified 2325.2077 0.20770795 2788 Q91ZZ3 Sncb Beta-synuclein yes yes 0 0 0 0 9.56 1.95 1 3 1 1 1 1 1 72.959 72.959 3;4;5 1.9111E-50 24016 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 146.25 126.96 352.36 461.29 316.08 330.77 487.74 504.94 334 453 315 323 493 486 7 6 5 4 6 5 160210 5217 2788 5025 12051;12052;12053;12054;12055;12056;12057;12058;12059 13876;13877;13878;13879;13880;13881;13882;13883;13884;13885 13881 10 EQAVEGGEVELSCLVPR Unmodified 1870.9095 0.90947702 2663 Q8R464 Cadm4 Cell adhesion molecule 4 yes yes 0 0 0 0 3.5 0.5 1 1 71.245 71.245 3 5.627E-06 26399 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.381 76.442 50.148 56.203 0 40.101 18.101 38.925 47 56 0 37 19 37 2 2 0 2 1 1 11161 5218 2663 5026 12060;12061 13886;13887 13886 2 EQAVTLAQK Unmodified 986.53966 0.53965977 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 47.188 47.188 2 8.617E-06 14143 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.97 61.655 93.173 177.01 237.5 54.727 247.04 195.49 88 176 232 60 245 190 1 2 2 1 2 2 29311 5219 3397 5027 12062;12063 13888;13889 13888 2 EQDDLLVLLADQDQK Unmodified 1741.8734 0.87340909 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 4 0 1 83.547 83.547 3 2.4975E-07 31691 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.07 63.446 9.4551 19.284 17.599 39.392 0 29.848 9 19 19 37 0 28 1 1 1 1 0 1 2750.2 5220 3387 5028 12064 13890 13890 1 EQDHFLISPK Unmodified 1212.6139 0.61388734 3275 Q9QYB8;A0A0N4SWF0 Add2 Beta-adducin yes no 0 0 0 0 5.5 0.5 1 1 52.879 52.879 3 0.001293 16666 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.34 50.467 245.82 186.75 185.15 278.66 230.03 269.53 231 194 185 269 241 259 2 2 1 2 2 2 29163 5221 3275 5029 12065;12066 13891;13892 13892 2 EQDHIIIIPR Unmodified 1232.6877 0.68772099 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 4 0 1 51.039 51.039 3 0.0012087 16750 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.499 41.179 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 5158.3 5222 3274 5030 12067 13893 13893 1 EQDLQLEELK Unmodified 1243.6296 0.62959699 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 6.67 4.5 1 1 1 62.516 62.516 2;3 0.0018785 22205 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.153 34.207 119 0 197.21 53.071 159.52 96.526 112 0 185 56 158 93 3 0 3 1 3 1 12034 5223 3387 5031 12068;12069;12070 13894;13895;13896 13895 3 EQDVVPFQESPK Unmodified 1401.6776 0.67760981 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 4 0 1 58.144 58.144 3 0.024271 20193 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.621 15.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2919.1 5224 732 5032 12071 13897 13897 1 EQDVVQGWR Unmodified 1115.536 0.53597137 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4.5 0.5 1 1 50.055 50.055 2 1.1797E-11 16256 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.84 100.03 0 0 100.63 0 74.768 76.75 0 0 93 0 74 74 0 0 1 0 1 1 6503.9 5225 510 5033 12072;12073 13898;13899 13898 2 EQEAEEAETPSTEEKEAGVGNGTSAPVR Deamidation (N) 2902.2952 0.29519815 3103 Q9DAR7;Q3TBW9;D6RFQ0 Dcps m7GpppX diphosphatase yes no 0 1 0 1 1 0 1 46.812 46.812 4 7.0584E-05 13842 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.305 41.656 20.178 18.532 19.344 0 0 9.594 19 19 19 0 0 9 1 1 1 0 0 1 2206.4 5226 3103 5034 12074 13900 13900 1074 1 EQEELRR Unmodified 958.48321 0.48320752 2658;3424 Q8R326 Pspc1 Paraspeckle component 1 no no 0 0 0 1 1 0 1 24.396 24.396 3 0.020488 4282 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.146 15.839 20.081 27.975 27.696 18.423 36.867 28.796 19 28 28 19 37 28 1 1 1 1 1 1 8950.3 5227 2658;3424 5035 12075 13901 13901 1 EQEFQSK Unmodified 894.40831 0.40831125 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 0 6.25 3.96 1 1 1 1 40.138 40.138 2 0.018068 11232 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.71 56.998 216.89 215.58 305.49 174.18 318.19 244.09 203 213 297 167 315 232 2 3 3 2 3 2 42489 5228 3324 5036 12076;12077;12078;12079 13902;13903;13904;13905 13905 4 EQESEVDMK Oxidation (M) 1109.4547 0.45466909 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 1 0 1.5 0.5 1 1 36.043 36.043 3 0.0085914 9475 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.334 44.594 39.351 39.368 58.796 96.398 92.85 0 37 37 56 93 93 0 1 1 1 2 2 0 8296.9 5229 2614 5037 12080;12081 13906;13907 13906 178 2 EQESEVDMK Unmodified 1093.4598 0.45975447 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 2.33 0.471 2 1 42.735 42.735 2;3 0.0023327 13001 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.483 63.549 39.317 45.864 54.676 66.59 63.611 38.425 37 46 56 65 65 37 1 1 2 2 2 1 31353 5230 2614 5037 12082;12083;12084 13908;13909;13910 13908 3 EQFASTNIAEELVK Unmodified 1577.7937 0.7937022 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 5 0 1 72.727 72.727 3 0.0042061 26712 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.325 29.486 0 29.017 46.384 36.981 37.003 0 0 28 46 37 37 0 0 1 1 1 1 0 14201 5231 919;937 5038 12085 13911 13911 1 EQFLDGDAWTNR Unmodified 1450.6477 0.64770667 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 5.5 0.5 1 1 64.467 64.467 3 0.00072759 22697 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.287 49.169 78.424 120.05 140.24 57.48 159.32 96.188 74 120 139 56 158 93 1 2 2 1 2 1 19062 5232 1375 5039 12086;12087 13912;13913 13912 2 EQFTAFLSQLLR Unmodified 1451.7773 0.77726428 2581 Q8K0P3 Tldc1 TLD domain-containing protein 1 yes yes 0 0 0 0 12 0 1 97.426 97.426 3 0.0029888 27885 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.001 27.564 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 488.35 5233 2581 5040 12088 13914 13914 1 EQFWEQAK Unmodified 1064.4927 0.49270958 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 0 7.2 2.99 2 1 1 1 58.305 58.305 2;3 0.002385 19315 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.38 71.206 394.15 215.69 377.19 330.89 388.56 444.9 370 222 361 315 399 426 4 2 4 3 4 4 45495 5234 3267 5041 12089;12090;12091;12092;12093 13915;13916;13917;13918;13919 13917 5 EQGAIPR Unmodified 769.40825 0.40825167 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 4 0 1 31.997 31.997 2 0.059108 7812 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.127 19.578 0 82.682 82.195 59.494 63.122 62.159 0 79 83 60 65 60 0 1 1 1 1 1 13043 5235 1878 5042 12094 13920 13920 1 EQGATVLCGGEVYVPEDPK Unmodified 2046.9568 0.95682114 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 3 0 1 65.372 65.372 3 0.00044108 23671 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.528 39.06 0 9.2416 20.004 0 19.197 19.706 0 9 19 0 19 19 0 1 1 0 1 1 2584.6 5236 1958 5043 12095 13921 13921 1 EQGFETK Unmodified 837.38685 0.38684752 1626 P55264;A0A286YCD7 Adk Adenosine kinase yes no 0 0 0 0 4 0 1 41.927 41.927 2 0.018068 12397 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.71 47.752 188.85 0 0 0 145.39 0 176 0 0 0 139 0 1 0 0 0 1 0 10625 5237 1626 5044 12096 13922 13922 1 EQGFLSFWR Unmodified 1168.5665 0.56654322 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 10 1.87 1 1 1 1 78.129 78.129 2;3 0.00039181 26409 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.82 94.697 767.34 518.87 648.23 522.34 314.57 559.2 721 546 642 517 334 533 3 3 3 3 2 3 311700 5238 1585 5045 12097;12098;12099;12100 13923;13924;13925;13926 13924 4 EQGNIEEAVR Unmodified 1143.552 0.55201537 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 1.5 0.5 1 1 40.509 40.509 2 4.5845E-09 12077 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 155.57 91.899 78.802 59.025 134.28 151.91 98.406 199.73 74 56 134 148 102 190 1 1 2 2 1 2 31091 5239 2543 5046 12101;12102 13927;13928 13928 2 EQGQNLAR Unmodified 914.45699 0.45699277 79 A0A0G2JDL9;Q99JI6;P62835;A0A0G2JE52 Rap1b;Rap1a Ras-related protein Rap-1b;Ras-related protein Rap-1A yes no 0 0 0 0 6.67 4.5 1 1 1 26.805 26.805 2 0.0032827 5418 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.98 52.641 151.98 131.15 134.33 86.389 124.07 148.9 143 135 134 88 125 143 3 3 2 2 2 3 75337 5240 79 5047 12103;12104;12105 13929;13930;13931 13930 3 EQGQQLAK Unmodified 900.46649 0.46649483 1947 Q3TYH2;Q8K386;D3Z1A7;D3YTZ8;D3YWS1;D3YYX5 Rab15 Ras-related protein Rab-15 yes no 0 0 0 0 5 0 1 36.891 36.891 2 0.012545 9693 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.948 27.987 24.389 42.835 12.455 0 23.056 29.19 23 42 14 0 23 28 1 1 1 0 1 1 2909.4 5241 1947 5048 12106 13932 13932 1 EQGSSGLGSGSSGGGGSSSGLGSGYIGR Unmodified 2401.0742 0.074187174 1983 Q3UHJ0;A0A0N4SVA1 Aak1 AP2-associated protein kinase 1 yes no 0 0 0 0 4 0 1 50.153 50.153 3 4.5947E-08 16402 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.252 46.195 15.022 0 0 0 28.804 14.102 14 0 0 0 28 14 1 0 0 0 1 1 2810.8 5242 1983 5049 12107 13933 13933 1 EQGVDENETLLLR Unmodified 1514.7577 0.75765105 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 2.33 0.471 2 1 58.938 58.938 2;3 6.6087E-20 20735 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152.38 97.839 149.34 64.234 93.521 116.9 55.07 68.785 140 66 93 113 56 66 4 3 3 4 2 3 10981 5243 287 5050 12108;12109;12110 13934;13935;13936;13937 13937 4 EQGVLSFWR Unmodified 1120.5665 0.56654322 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 9.2 2.04 1 1 2 1 71.024 71.024 2;3 3.9367E-05 23770 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.23 86.485 305.86 421.68 475.15 422.03 464.98 592.99 287 413 462 409 474 566 3 4 4 4 4 5 195550 5244 1607 5051 12111;12112;12113;12114;12115 13938;13939;13940;13941;13942;13943 13939 6 EQGYDVIAYLANIGQK Unmodified 1780.8996 0.89956426 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 8.33 0.471 2 1 89.3 89.3 3;4 3.2826E-05 31493 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.754 74.766 22.34 54.559 19.534 0 78.14 9.0357 21 53 19 0 75 9 1 3 1 0 3 1 11406 5245 1393 5052 12116;12117;12118 13944;13945;13946 13946 3 EQHDAQVR Unmodified 981.46281 0.46280643 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 5.33 5.44 1 1 1 18.038 18.038 3 5.0306E-44 2773 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 210.01 134.82 57.234 58.728 74.918 54.329 82.923 71.188 54 60 75 55 84 69 3 4 4 3 4 4 45087 5246 1379 5053 12119;12120;12121 13947;13948;13949;13950 13948 4 EQHPDMSVTR Unmodified 1198.5401 0.54007047 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6H2;A0A1W2P7I2 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 3 0 1 31.178 31.178 3 0.0015939 7927 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.276 44.457 29.419 56.647 57.045 0 75.098 67.147 28 56 56 0 74 65 1 1 1 0 1 1 6062.3 5247 1250 5054 12122 13951 13951 1 EQHQFHR Unmodified 980.45766 0.45766147 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0.816 1 1 1 19.218 19.218 3 0.019414 2695 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.672 40.114 9.5351 19.507 9.3686 5.2291 0 32.254 9 19 10 5 0 31 1 1 2 1 0 2 6054.3 5248 2186 5055 12123;12124;12125 13952;13953;13954 13954 3 EQIASEQSSR Unmodified 1133.5313 0.53127993 2635 Q8R127;J3QNN5 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 0 5 4.64 2 1 1 29.726 29.726 2;3 2.045E-09 6953 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 158.94 92.589 113.79 75.649 107.58 139.8 71.21 57.664 107 80 107 135 74 56 3 3 3 4 2 2 16462 5249 2635 5056 12126;12127;12128;12129 13955;13956;13957;13958 13956 4 EQIDIFEGIK Unmodified 1190.6183 0.61830402 3396 Q9Z2I8 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 75.202 75.202 3 0.017905 27192 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.004 31.75 39.429 7.4035 39.391 0 27.961 38.644 37 9 37 0 28 37 2 1 2 0 1 1 2665.4 5250 3396 5057 12130;12131 13959;13960 13960 2 EQILLQK Unmodified 870.51747 0.51746776 3209 Q9JI91 Actn2 Alpha-actinin-2 yes yes 0 0 0 0 7 0 1 57.072 57.072 3 0.03885 17838 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.17 10.143 59.716 55.296 15.617 29.673 0 0 56 56 19 28 0 0 1 1 1 1 0 0 2814.5 5251 3209 5058 12132 13961 13961 1 EQIPEDQLYK Unmodified 1261.619 0.6190323 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 4 0.816 1 1 1 55.727 55.727 2;3 0.0016295 19300 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.01 45.405 99.104 0 115.07 101.64 158.6 58.118 93 0 111 102 158 56 2 0 2 2 2 1 17452 5252 487 5059 12133;12134;12135 13962;13963;13964 13962 3 EQIPWTLIDFYDNQPCINLIESK Unmodified 2835.3789 0.37893196 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 10 3 1 1 100.74 100.74 4 0.00011865 36641 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.728 28.684 35.229 0 30.194 15.302 39.748 0 33 0 28 14 38 0 2 0 1 1 1 0 3103.3 5253 728 5060 12136;12137 13965;13966 13965 2 EQISDIDDAVR Unmodified 1259.5994 0.59935949 1351 P11031 Sub1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 0 0 0 4.6 4.32 1 1 1 1 1 52.814 52.814 2;3 3.2944E-10 17931 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.09 83.055 98.885 218.99 58.249 118.25 351.55 295.91 93 213 56 111 351 287 2 5 1 3 5 5 81235 5254 1351 5061 12138;12139;12140;12141;12142 13967;13968;13969;13970;13971;13972 13970 6 EQIVPKPEEEVAQK Unmodified 1622.8516 0.85155143 2270 Q6ZWZ7;Q9CPR4;B2RY53 Rpl17;Gm6133 60S ribosomal protein L17 yes no 0 0 0 1 4.5 0.5 1 1 53.129 53.129 3;4 0.025017 17371 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.378 25.985 39.468 46.283 0 39.392 111.72 105.54 37 46 0 37 112 102 1 1 0 1 2 2 5513.5 5255 2270 5062 12143;12144 13973;13974 13974 2 EQKPPATQLLK Unmodified 1251.7187 0.71868677 3178 Q9ER72 Cars Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 8 0 1 50.507 50.507 3 0.032257 14120 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.934 32.445 0 39.368 0 79.525 72.138 46.978 0 37 0 74 74 46 0 1 0 1 1 1 2681.4 5256 3178 5063 12145 13975 13975 1 EQLAALR Unmodified 799.4552 0.45520186 827 E9PV44;O35143 Atpif1 ATPase inhibitor, mitochondrial yes no 0 0 0 0 5 0 1 45.352 45.352 2 0.043304 13685 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.324 2.4082 99.077 141.22 0 118.38 156.58 94.67 93 139 0 111 158 93 1 1 0 1 1 1 26635 5257 827 5064 12146 13976 13976 1 EQLAIAEFAR Unmodified 1146.6033 0.60332266 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 5 0 1 64.275 64.275 2 0.0086622 22585 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.49 25.656 88.692 72.756 0 90.719 0 118.33 83 74 0 83 0 111 1 1 0 1 0 1 13714 5258 1356 5065 12147 13977 13977 1 EQLAQQQVHVEMDVAKPDLTAALR Unmodified 2689.3857 0.38574867 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 9.5 3.5 1 1 67.052 67.052 4 2.3922E-16 24404 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.966 79.204 187.52 143.12 102.23 163.53 163.19 115.75 176 148 102 158 167 111 2 2 1 2 2 1 18529 5259 1304 5066 12148;12149 13978;13979 13979 2 EQLAQQR Unmodified 871.45118 0.45117911 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 5 0 1 29.209 29.209 2 0.030491 6080 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.492 29.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5260 1275 5067 12150 13980 13980 1 EQLDMAGAR Unmodified 989.46003 0.46002924 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 3.5 0.5 1 1 42.246 42.246 2 0.0022673 12607 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.775 39.054 29.904 73.776 0 19.91 45.562 47.736 28 74 0 19 46 46 1 2 0 1 1 1 7439.1 5261 895 5068 12151;12152 13981;13982 13982 2 EQLEEEEEAKR Unmodified 1388.642 0.64195259 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 1 1 0 1 40.263 40.263 3 0.0025344 11237 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.079 42.655 0 164.28 229.29 145.09 159.9 236.35 0 158 227 148 167 226 0 1 1 1 1 1 28251 5262 2696 5069 12153 13983 13983 1 EQLEEQASQHR Unmodified 1353.6273 0.62730558 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 2.5 0.5 1 1 31.859 31.859 3 3.5878E-09 8238 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.38 77.14 20.131 18.401 27.392 38.126 36.291 19.218 19 19 28 37 37 19 1 1 1 1 1 1 6333.1 5263 3358 5070 12154;12155 13984;13985 13985 2 EQLLAEMER Unmodified 1117.5438 0.54375887 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 4 0 1 60.565 60.565 2 0.0082013 21298 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.662 47.092 34.03 21.623 33.155 0 53.346 0 32 23 32 0 51 0 1 1 1 0 1 0 3929.9 5264 1669 5071 12156 13986 13986 1 EQLMASDDFGR Unmodified 1267.5503 0.55030081 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 54.913 54.913 2 0.0030253 18345 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.76 47.713 59.794 0 49.471 0 0 39.442 56 0 46 0 0 37 1 0 1 0 0 1 1634.7 5265 551 5072 12157 13987 13987 1 EQLMSQEER Unmodified 1148.5132 0.51318702 1529 P36916 Gnl1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 0 3 0 1 39.588 39.588 2 0.0094082 11863 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.143 46.333 0 29.315 28.537 0 29.288 0 0 28 28 0 28 0 0 1 1 0 1 0 1822.8 5266 1529 5073 12158 13988 13988 1 EQLQGLNDR Deamidation (N) 1072.5149 0.51490158 154;1557 P46660;A0A0R4J036;P08553;D3YZ35 Ina;Nefm Alpha-internexin;Neurofilament medium polypeptide no no 0 1 0 0 2.5 0.5 1 1 44.332 44.332 2 0.0076414 13924 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.86 60.191 24.679 47.702 74.315 80.193 91.678 100.79 23 46 74 79 93 97 1 1 1 2 1 2 13573 5267 1557;154 5074 12159;12160 13989;13990 13990 62;589 2 EQLQGLNDR Unmodified 1071.5309 0.530886 154;1557 P46660;A0A0R4J036;P08553;D3YZ35 Ina;Nefm Alpha-internexin;Neurofilament medium polypeptide no no 0 0 0 0 3 0 1 41.877 41.877 2 0.00044315 12879 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.75 66.766 69.522 44.256 0 0 75.428 57.544 65 46 0 0 74 56 1 1 0 0 1 1 11624 5268 1557;154 5074 12161 13991 13991 1 EQLQQAQEER Unmodified 1257.5949 0.59494282 453 A2AEW8;A2AEW9;Q8VD04 Gripap1 GRIP1-associated protein 1 yes no 0 0 0 0 2 0 1 33.817 33.817 2 0.00010919 8847 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.69 63.097 0 19.906 18.536 18.577 57.723 0 0 19 19 19 56 0 0 1 1 1 1 0 4668.9 5269 453 5075 12162 13992 13992 1 EQLTEGEEIAQEIDGR Unmodified 1815.8487 0.8486509 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 1 0 1 68.135 68.135 3 1.8639E-17 23008 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.64 114.5 0 0 0 0 27.924 39.711 0 0 0 0 28 38 0 0 0 0 1 1 10458 5270 2773 5076 12163 13993 13993 1 EQLTQDLQEAR Unmodified 1329.6525 0.6524577 453 A2AEW8;A2AEW9;Q8VD04;A2AEW6;A2AEW5 Gripap1 GRIP1-associated protein 1 yes no 0 0 0 0 3.5 0.5 1 1 50.648 50.648 2 1.9697E-06 16971 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.839 44.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5271 453 5077 12164;12165 13994;13995 13994 2 EQLYEMFQNILGIK Unmodified 1724.8807 0.88074307 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 12 0.816 1 1 1 104.44 104.44 2;3 2.8157E-05 29123 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.004 47.776 12.876 9.576 0 30.604 0 88.64 12 9 0 28 0 86 1 1 0 1 0 3 7347.2 5272 2301;365 5078 12166;12167;12168 13996;13997;13998;13999 13997 4 EQMAISGGFIR Unmodified 1207.6019 0.60194245 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 8 2.92 2 1 1 59.967 59.967 2;3 0.0022125 20838 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.525 39.545 138.68 106.19 275.41 192.5 299.01 356.04 130 102 269 195 306 342 1 2 3 3 4 4 89809 5273 1681 5079 12169;12170;12171;12172 14000;14001;14002;14003 14003 4 EQNEASPTPR Unmodified 1127.5207 0.52071524 1118 Q99JR5;H3BJ97 Tinagl1 Tubulointerstitial nephritis antigen-like yes no 0 0 0 0 1 0 1 26.305 26.305 2 0.0065823 4991 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.365 45.062 34.025 36.719 21.204 29.34 0 34.112 32 37 23 28 0 32 1 1 1 1 0 1 11072 5274 1118 5080 12173 14004 14004 1 EQNLQDIK Unmodified 986.50327 0.50327426 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 0 7 3.54 1 1 1 1 47.911 47.911 2 0.0037401 15015 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.64 30.998 208.38 202.47 379.32 432.16 107.57 525.67 195 194 376 416 111 496 2 2 3 3 1 3 51624 5275 3276 5081 12174;12175;12176;12177 14005;14006;14007;14008 14008 4 EQNRQDIK Unmodified 1029.5203 0.52032131 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 1 4 0 1 28.812 28.812 3 0.052526 6364 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.729 12.96 79.001 0 67.384 57.192 0 59.696 74 0 65 56 0 56 1 0 1 1 0 1 5299.6 5276 3275 5082 12178 14009 14009 1 EQNSPIYISR Unmodified 1205.6041 0.60405094 1284;2571;1283 O88952;O88951;Q8JZS0;Q3TUM0 Lin7c;Lin7b;Lin7a Protein lin-7 homolog C;Protein lin-7 homolog B;Protein lin-7 homolog A no no 0 0 0 0 7.33 4.03 1 1 1 46.201 46.201 2 0.00017029 14164 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.34 48.148 171.61 206.37 265.38 157.64 109.77 178.02 162 209 264 157 107 167 2 3 3 2 2 1 39303 5277 1284;1283;2571 5083 12179;12180;12181 14010;14011;14012 14011 3 EQNYCESR Unmodified 1084.4244 0.42437201 3041 Q9D1H7;D3Z7S0;D3Z4J5 Get4 Golgi to ER traffic protein 4 homolog yes no 0 0 0 0 1.5 0.5 1 1 26.786 26.786 2 0.009583 5684 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.855 52.506 34.153 7.5178 24.311 20.252 55.65 58.108 32 9 23 19 56 56 2 1 1 1 2 2 5646.4 5278 3041 5084 12182;12183 14013;14014 14014 2 EQPFGDGVPLDGDDPEHIQWIFQK Unmodified 2766.2926 0.29255979 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 5 0 1 85.25 85.25 4 0.003503 32471 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.94 28.489 0 19.572 38.524 7.541 0 0 0 19 37 9 0 0 0 1 1 1 0 0 2225.9 5279 1929 5085 12184 14015 14015 1 EQPGNTVSSGQEDFPSVLFETAASLPSLSPLSTVSFK Unmodified 3852.8945 0.89454505 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 10.5 2.5 1 1 108.53 108.53 5 1.935E-11 36859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.864 47.564 34.269 13.236 0 24.794 18.326 25.061 32 14 0 23 19 24 2 1 0 2 1 1 2960.6 5280 2886 5086 12185;12186 14016;14017 14016 2 EQPGPQR Unmodified 810.39842 0.39841526 892 S4R1K2;S4R2U8;E9Q350;S4R1E7;Q80TT2 Baiap3 BAI1-associated protein 3 yes no 0 0 0 0 3 0 1 22.033 22.033 2 0.054905 3805 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.243 43.308 0 9.3321 14.588 0 48.116 0 0 9 14 0 46 0 0 1 1 0 1 0 1574.9 5281 892 5087 12187 14018 14018 1 EQPLDEELK Unmodified 1099.5397 0.53971935 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 2.5 0.5 1 1 54.159 54.159 2 0.00034706 18486 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.76 49.43 39.468 46.283 47.69 77.352 36.555 0 37 46 46 74 37 0 1 1 1 2 1 0 8834.7 5282 2699 5088 12188;12189 14019;14020 14020 2 EQPLDEELKDAFQNAYLELGGLGER Deamidation (N) 2834.361 0.36103329 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 1 4 0 1 87.186 87.186 4 4.6452E-11 33163 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.31 55.999 0 0 0 12.891 11.96 0 0 0 0 12 12 0 0 0 0 1 1 0 1214.6 5283 2699 5089 12190 14021 14021 970 1 EQPLDEELKDAFQNAYLELGGLGER Unmodified 2833.377 0.3770177 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 1 7.33 2.62 1 2 2 1 97.571 97.571 3;4 1.2125E-41 35707 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.21 123.65 113.03 63.976 135.98 92.131 86.995 81.744 106 63 133 90 88 78 5 3 6 4 5 4 39599 5284 2699 5089 12191;12192;12193;12194;12195;12196 14022;14023;14024;14025;14026;14027;14028 14022 7 EQPLDEEMK Unmodified 1117.4961 0.49613997 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 4 4.08 1 2 2 1 50.18 50.18 2;3 0.00056262 16887 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.096 68.714 334.52 247.24 446.7 240.07 294.65 436.11 315 260 438 231 296 417 4 5 6 4 3 5 115940 5285 106 5090 12197;12198;12199;12200;12201;12202 14029;14030;14031;14032;14033;14034 14033 6 EQPLDEEMKEAFQNAYLELGGLGER Deamidation (N) 2866.3331 0.33310398 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 1 5 0 1 84.63 84.63 4 1.9598E-07 32166 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.912 46.664 20.209 0 29.835 8.0588 0 9.594 19 0 28 9 0 9 1 0 1 1 0 1 2418.1 5286 106 5091 12203 14035 14035 37 1 EQPLDEEMKEAFQNAYLELGGLGER Unmodified 2865.3491 0.34908839 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 7.75 3.11 1 1 1 1 95.184 95.184 4 1.174E-41 36051 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 140.31 116.4 229.86 158.11 351.92 209.22 193.56 223.04 216 162 338 205 198 212 7 6 7 6 6 6 129100 5287 106 5091 12204;12205;12206;12207 14036;14037;14038;14039;14040;14041;14042;14043;14044 14039 9 EQPQLSEK Unmodified 957.47673 0.47672516 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 8.5 4.5 1 1 40.915 40.915 2 0.02341 12074 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.228 34.78 60.088 0 0 0 95.576 0 56 0 0 0 93 0 1 0 0 0 2 0 10639 5288 1999 5092 12208;12209 14045;14046 14045 2 EQPWVSVQPR Unmodified 1224.6251 0.62512073 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 53.66 53.66 2 0.00049707 17115 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.113 53.826 29.754 57.578 0 30.604 0 0 28 56 0 28 0 0 1 1 0 1 0 0 4152.8 5289 3204 5093 12210 14047 14047 1 EQQAVHR Unmodified 866.43586 0.4358634 841 Q6P0A6;Q925I8;E9PX28;E9PXQ7 Pcdh10 yes no 0 0 0 0 3 0 1 17.718 17.718 3 0.043395 2536 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.335 16.135 6.3919 9.145 0 9.837 0 9.594 6 9 0 9 0 9 1 1 0 1 0 1 852.18 5290 841 5094 12211 14048 14048 1 EQQDTAESSDDFGSQLR Unmodified 1911.8082 0.80824265 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 2 0.816 1 1 1 48.548 48.548 3 2.0463E-46 15456 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 174.21 156.96 20.33 11.397 0 52.934 24.527 25.95 19 12 0 52 25 25 1 1 0 2 1 1 21495 5291 1275 5095 12212;12213;12214 14049;14050;14051 14050 3 EQQEVADRLDAK Unmodified 1400.6896 0.68957148 1281 O88851 Rbbp9 Putative hydrolase RBBP9 yes yes 0 0 0 1 3 0 1 44.51 44.51 3 0.0039655 14072 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.607 25.429 69.301 0 74.569 115.59 68.427 106.78 65 0 74 111 74 102 1 0 1 1 1 1 6733.4 5292 1281 5096 12215 14052 14052 1 EQQHFLQDCQELR Unmodified 1729.7842 0.78421693 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 46.006 46.006 3 9.8142E-09 13868 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.727 85.861 39.032 143.41 110.69 154.52 92.249 77.887 37 139 111 149 93 74 1 3 2 3 2 2 27658 5293 2186 5097 12216;12217;12218;12219 14053;14054;14055;14056 14056 4 EQQHLLASADTGR Unmodified 1424.7008 0.70080487 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4.5 0.5 1 1 36.722 36.722 3 0.00010798 9501 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.196 57.239 56 48.944 0 49.631 34.406 58.714 56 46 0 46 37 56 1 1 0 1 1 1 29368 5294 2186 5098 12220;12221 14057;14058 14058 2 EQQIEEHRR Unmodified 1223.6007 0.6006969 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 1 2 0.816 1 1 1 21.634 21.634 4 0.0002345 3401 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.01 42.364 59.786 88.961 38.285 70.232 119.51 81.111 56 88 37 65 120 78 2 3 1 1 3 2 11788 5295 3267 5099 12222;12223;12224 14059;14060;14061 14059 3 EQQLGLK Unmodified 814.45487 0.45486751 2997 Q9CZ04;D3Z440 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 6 0 1 48.135 48.135 2 0.030234 14500 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.095 44.203 69.115 0 105.87 92.961 126.42 154.16 65 0 102 93 130 148 1 0 1 1 1 1 5594.7 5296 2997 5100 12225 14062 14062 1 EQQSTYTFQLK Unmodified 1371.667 0.66704513 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 6 0 1 59.394 59.394 3 0.0020321 19888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.301 36.552 39.081 45.208 65.823 35.865 34.709 68.3 37 46 65 37 37 65 1 1 1 1 1 1 5288.9 5297 1018;2532 5101 12226 14063 14063 1 EQSEGVGAR Unmodified 931.43592 0.43592298 470 A2AIH8;Q9D711 Pir Pirin yes no 0 0 0 0 1 0 1 24.583 24.583 2 2.3959E-05 4344 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.9 62.639 62.583 73.523 59.405 66.267 65.769 67.413 59 74 62 65 68 65 1 1 1 1 1 1 9437.1 5298 470 5102 12227 14064 14064 1 EQSESLSELR Unmodified 1176.5622 0.5622457 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 2 0 1 44.518 44.518 2 4.1392E-05 13729 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 118.4 58.285 39.091 50.632 59.604 46.726 0 0 37 51 60 46 0 0 1 1 1 1 0 0 9483.7 5299 2208 5103 12228 14065 14065 1 EQSGEYECSASNDVAAPVVR Unmodified 2166.9488 0.94877565 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 0 0 0 2 0.816 1 1 1 49.429 49.429 3 6.8045E-39 16402 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 148.91 135.68 20.292 48.521 7.0822 55.373 55.32 78.371 19 47 9 52 56 75 1 2 1 3 2 3 51487 5300 765;987 5104 12229;12230;12231 14066;14067;14068 14068 3 EQSGEYECSASNDVAAPVVR Deamidation (N) 2167.9328 0.93279124 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 1 0 0 1.5 0.5 1 1 49.874 49.874 3 3.6733E-38 14842 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 146.28 131.69 6.3629 15.906 6.7616 8.2151 6.6949 7.271 6 16 7 8 7 7 1 2 1 1 1 1 10496 5301 765;987 5104 12232;12233 14069;14070 14069 204 2 EQSILELGSLLAK Unmodified 1399.7922 0.79224564 2369 Q8BG32;G3UYI4;G3UYL3;G3UYL8;G3UX15;G3UX67;G3UWV7 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 8 0.816 1 1 1 88.671 88.671 3 7.021E-05 31212 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.09 69.708 20.179 7.7396 28.457 49.339 17.883 49.592 19 9 28 47 19 47 1 1 1 2 1 2 5897.9 5302 2369 5105 12234;12235;12236 14071;14072;14073 14073 3 EQSNDIAR Unmodified 931.43592 0.43592298 2136 Q61686 Cbx5 Chromobox protein homolog 5 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 26.736 26.736 2 1.5597E-10 5252 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 175.51 57.58 126.89 203.52 253.31 239.7 172.85 234.85 120 203 255 232 171 223 2 3 4 4 2 3 34214 5303 2136 5106 12237;12238;12239;12240 14074;14075;14076;14077;14078 14074 5 EQSTEVK Unmodified 819.39741 0.39741221 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 3.5 0.5 1 1 33.125 33.125 2 0.028301 8870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.639 14.391 48.292 103.75 147.08 172.19 83.877 118.33 46 102 149 167 83 111 1 1 2 2 1 1 14481 5304 2028 5107 12241;12242 14079;14080 14079 2 EQSTGQATK Unmodified 948.45124 0.45123869 3371 Q9Z140 Cpne6 Copine-6 yes yes 0 0 0 0 4.5 0.5 1 1 28.299 28.299 3 0.014326 6093 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.806 21.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5305 3371 5108 12243;12244 14081;14082 14081 2 EQTAHAFVNVLTR Unmodified 1484.7736 0.77357588 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 8 0 1 55.097 55.097 3 0.027622 16276 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.801 5.3874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5306 1412 5109 12245 14083 14083 1 EQTEGEYSSLEHESAK Unmodified 1822.7857 0.78571629 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 2 0.816 1 1 1 44.053 44.053 3 2.2542E-17 13622 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.88 102.23 314.76 364.29 170.22 183.41 276.47 401.45 296 365 172 176 281 384 3 3 2 2 2 3 59890 5307 2734 5110 12246;12247;12248 14084;14085;14086 14085 3 EQTESIEHGK Unmodified 1156.536 0.53603095 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 3 0.816 1 1 1 33.408 33.408 3 0.0015705 8858 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.451 46.533 48.86 83.675 80.307 95 99.057 95.245 46 83 83 93 102 92 1 2 2 2 2 2 8372.5 5308 3285 5111 12249;12250;12251 14087;14088;14089 14088 3 EQTVQYILTMVDDMLQENHQR Unmodified 2590.2156 0.2155718 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0;A0A0A6YW86 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 9 0 1 105.33 105.33 3 2.3117E-06 36930 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.032 50.935 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1353.2 5309 65 5112 12252 14090 14090 1 EQVANSAFVER Deamidation (N) 1249.5939 0.59388018 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 1 0 0 2.5 0.5 2 2 47.385 47.385 2;3 4.7939E-09 15166 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.14 102.42 99.071 53.071 115.74 59.488 133.66 136.71 93 55 111 56 130 130 3 2 3 2 2 3 32441 5310 1354 5113 12253;12254;12255;12256 14091;14092;14093;14094 14093 422 4 EQVANSAFVER Unmodified 1248.6099 0.6098646 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 45.521 45.521 2;3 4.2396E-16 13836 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.9 132.76 353.63 453.81 386.82 317.46 496.76 425.37 333 455 388 305 494 408 6 8 6 6 5 5 193490 5311 1354 5113 12257;12258;12259;12260;12261;12262 14095;14096;14097;14098;14099;14100;14101;14102 14102 8 EQVLQPVSAEVLELDIR Unmodified 1937.047 0.046956778 1529 P36916 Gnl1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 0 4.5 0.5 1 1 82.558 82.558 3 0.0021283 31200 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.468 28.162 0 9.576 0 0 9.414 0 0 9 0 0 9 0 0 1 0 0 1 0 4279.2 5312 1529 5114 12263;12264 14103;14104 14103 2 EQVSEELVR Unmodified 1087.551 0.55095274 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 3 0 1 46.254 46.254 2 0.063401 14992 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.124 29.695 0 59.173 24.6 48.163 34.473 58.712 0 56 28 46 37 56 0 1 1 1 1 1 6553.5 5313 1198 5115 12265 14105 14105 1 EQVTNVGGAVVTGVTAVAQK Unmodified 1927.0375 0.037454724 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 0 8.91 3.37 1 1 1 2 1 1 1 1 2 71.327 71.327 3;4 1.5294E-49 23872 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.14 129.49 489.4 484.79 242.32 525.86 509.68 464.07 459 481 245 501 510 444 10 11 5 12 9 9 262560 5314 1232 5116 12266;12267;12268;12269;12270;12271;12272;12273;12274;12275;12276 14106;14107;14108;14109;14110;14111;14112;14113;14114;14115;14116;14117;14118;14119 14111 14 EQWANLEQLSAIR Unmodified 1556.7947 0.79470526 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.67 3.09 1 1 1 73.49 73.49 2 2.8748E-21 26463 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 159.77 118.05 49.128 45.631 0 0 75.428 57.544 46 46 0 0 74 56 1 1 0 0 1 1 11862 5315 2148 5117 12277;12278;12279 14120;14121;14122 14120 3 EQWLAPLHPFLLQSISR Unmodified 2034.1051 0.10508078 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 83.563 83.563 3 2.4963E-06 23180 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.55 69.518 20.207 19.892 49.559 0 33.472 0 19 19 47 0 32 0 1 1 2 0 1 0 13590 5316 3391 5118 12280;12281 14123;14124 14124 2 EQWLNNMQIPEKLEDLEVIQHR Unmodified 2761.3857 0.38574867 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 6 0 1 81.557 81.557 4 0.00022501 30187 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.597 35.03 29.409 36.111 76.184 35.228 35.764 38.421 28 37 74 37 37 37 1 1 1 1 1 1 2801.5 5317 2148 5119 12282 14125 14125 1 EQWSNCPTIGQIR Unmodified 1587.7464 0.74637486 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 0 8 3.56 1 1 1 56.265 56.265 3 0.0010873 18402 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.937 40.08 108.6 90.547 93.702 75.297 0 59.696 102 93 93 74 0 56 2 2 2 2 0 2 18150 5318 1344 5120 12283;12284;12285 14126;14127;14128 14127 3 ERDEAAAYR Unmodified 1079.4996 0.49958587 624 B2RUJ5 Apba1 Amyloid beta A4 precursor protein-binding family A member 1 yes yes 0 0 0 1 1.5 0.5 1 1 25.394 25.394 3 0.025324 4604 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.859 25.924 0 0 0 9.4772 38.128 9.0482 0 0 0 9 38 9 0 0 0 1 2 1 7276.4 5319 624 5121 12286;12287 14129;14130 14129 2 ERDEEQPELSTVEELIK Unmodified 2043.0008 0.0007944461 2331 Q8CAA2;Q80X80;Q8CFV7 C2cd2l C2 domain-containing protein 2-like yes no 0 0 0 1 3 0 2 71.935 71.935 3;4 3.1435E-06 26720 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.361 54.714 0 28.822 58.038 18.508 47.305 29.31 0 28 56 19 47 28 0 2 2 1 2 1 4649.6 5320 2331 5122 12288;12289 14131;14132 14131 2 EREEIAR Unmodified 901.46174 0.4617438 631 Q91W39;B7ZC24;B7ZC23 Ncoa5 Nuclear receptor coactivator 5 yes no 0 0 0 1 1 0 1 22.869 22.869 3 0.019361 3787 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.212 16.297 0 38.738 37.71 0 0 49.036 0 37 37 0 0 46 0 1 1 0 0 1 3676.3 5321 631 5123 12290 14133 14133 1 EREEIEK Unmodified 931.46108 0.4610751 1987 Q3UHX2 Pdap1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 1 2.5 0.5 1 1 33.436 33.436 3 0.029666 8850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.072 14.191 422.51 367.19 452.94 414.28 422.36 604.1 398 379 458 411 434 578 2 2 2 2 1 2 31414 5322 1987 5124 12291;12292 14134;14135 14135 2 EREEWAK Unmodified 946.45084 0.45084476 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 4 0 1 37.853 37.853 3 0.016925 10508 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.114 49.765 0 152.87 275.39 0 241.17 287.33 0 148 263 0 240 276 0 1 1 0 1 1 23968 5323 2919 5125 12293 14136 14136 1 EREPVELAR Unmodified 1097.5829 0.58292157 2239 Q6PDS3 Sarm1 Sterile alpha and TIR motif-containing protein 1 yes yes 0 0 0 1 3 0 1 34.892 34.892 3 0.009436 9606 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.276 30.708 20.292 18.848 0 39.398 55.466 37.859 19 19 0 37 56 37 1 1 0 1 1 1 3603.6 5324 2239 5126 12294 14137 14137 1 EREQEFQSK Unmodified 1179.552 0.55201537 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 1 6.67 4.5 1 1 1 33.549 33.549 3 0.0021583 8568 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.306 64.718 270.63 440.16 328.85 228.58 265.61 327.36 255 436 323 217 261 310 2 3 2 2 2 2 96175 5325 3324 5127 12295;12296;12297 14138;14139;14140 14139 3 EREQQIEEHR Unmodified 1352.6433 0.64328999 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 1 13 0 1 22.033 22.033 3 0.024512 3267 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.486 22.644 0 0 12.677 6.8955 0 7.462 0 0 12 7 0 7 0 0 1 1 0 1 423.79 5326 3267 5128 12298 14141 14141 1 ERGDINHER Unmodified 1124.5323 0.53228298 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 1 1 0 1 18.399 18.399 3 0.0031039 2793 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.882 57.401 0 0 7.2036 8.3147 0 8.528 0 0 7 8 0 8 0 0 1 1 0 1 1218.8 5327 1369 5129 12299 14142 14142 1 ERGDINHER Deamidation (N) 1125.5163 0.51629857 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 1 0 1 13 0 1 20.439 20.439 3 0.012251 3007 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.572 47.514 0 5.2386 4.8675 5.123 2.7589 4.1853 0 5 5 5 3 4 0 1 1 1 1 1 328.9 5328 1369 5129 12300 14143 14143 439 1 ERHDELSYF Unmodified 1194.5306 0.53055165 2158 Q62426 Cstb Cystatin-B yes yes 0 0 0 1 3 0 1 49.905 49.905 3 0.060957 16597 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.715 34.176 20.27 0 19.639 18.334 67.148 0 19 0 19 19 65 0 1 0 1 1 1 0 2367.2 5329 2158 5130 12301 14144 14144 1 ERNEDFVEIAR Unmodified 1376.6684 0.66844211 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 1 3 0.816 1 1 1 45.56 45.56 3 2.7969E-08 14592 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.36 87.218 189.05 71.367 85.079 70.219 82.61 28.595 177 74 83 65 83 28 3 1 1 1 2 1 23453 5330 927 5131 12302;12303;12304 14145;14146;14147 14146 3 ERPGSTGEGDLVSLR Unmodified 1571.7903 0.79034816 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 4 0 1 44.961 44.961 3 0.0024091 13861 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.98 32.439 59.808 55.551 0 28.659 103.43 56.745 56 56 0 28 102 56 1 1 0 1 1 1 9705.4 5331 1999 5132 12305 14148 14148 1 ERPPEEVAAR Unmodified 1152.5887 0.58873523 2517 Q8CAQ8 Immt MICOS complex subunit Mic60 yes yes 0 0 0 1 1 0 1 29.72 29.72 3 5.4762E-07 6641 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.2 54.54 226.95 110.52 174.99 172.1 0 138.58 213 121 176 167 0 130 1 1 1 1 0 1 21522 5332 2517 5133 12306 14149 14149 1 ERPPNPIEFLASYLLK Unmodified 1886.0302 0.030184502 2867 Q99LT0 Dpy30 Protein dpy-30 homolog yes yes 0 0 0 1 11.3 0.471 2 1 99.026 99.026 3;4 4.3388E-05 28237 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.23 65.543 0 88.568 48.321 60.455 17.475 68.791 0 84 48 57 19 65 0 3 2 3 1 3 8335 5333 2867 5134 12307;12308;12309 14150;14151;14152;14153 14152 4 ERPQDVDQR Unmodified 1141.5476 0.54759869 1498 P31750;D3Z783;D3YYP9;D3YXX3 Akt1 RAC-alpha serine/threonine-protein kinase yes no 0 0 0 1 1.5 0.5 1 1 24.283 24.283 3 0.04935 4593 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.276 15.368 29.694 66.63 95.186 29.02 37.714 49.026 28 66 93 28 37 47 1 2 2 1 1 2 9653.9 5334 1498 5135 12310;12311 14154;14155 14155 2 ERPQLTECEEPSIYSPAFPR Unmodified 2405.1322 0.13215975 1215 O35954 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 0 0 0 1 4 0 1 59.954 59.954 3 4.2348E-06 21013 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.034 44.399 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5335 1215 5136 12312 14156 14156 1 ERPTTSSGGR Unmodified 1046.5105 0.51048491 2972 Q9CVD2 Atxn3 Ataxin-3 yes yes 0 0 0 1 3 0 1 16.715 16.715 3 0.0053367 2445 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.525 35.685 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 523.84 5336 2972 5137 12313 14157 14157 1 ERQEQEEAR Unmodified 1173.5374 0.53742794 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 1 13 0 1 17.24 17.24 3 0.0016037 2779 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.309 38.051 0 0 0 4 0 0 0 0 0 4 0 0 0 0 0 1 0 0 464.33 5337 2075 5138 12314 14158 14158 1 ERSEELNK Acetyl (Protein N-term) 1045.504 0.50400254 1111 G8JL83 Yrdc yes yes 1 0 0 1 1 0 1 41.627 41.627 2 0.047396 11837 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.566 28.657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5338 1111 5139 12315 14159 14159 1 ESAINVAEGK Unmodified 1016.5138 0.51383895 2827 Q99JB2;A2AG39;F6WI02 Stoml2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 49.364 49.364 2 0.0076447 15983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.979 40.632 79.982 53.564 37.477 17.668 94.111 38.13 75 56 37 19 92 37 2 2 1 1 2 1 3730.9 5339 2827 5140 12316;12317 14160;14161 14160 2 ESAPFAVIGSNTVVEAK Unmodified 1717.8887 0.88866522 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6 Sept5 Septin-5 no no 0 0 0 0 7.33 2.75 2 1 1 1 1 70.685 70.685 3 2.4103E-12 24208 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.21 89.573 451.67 385.71 445.5 324.1 202.34 361.87 425 395 441 311 202 343 6 6 5 6 3 4 124690 5340 410;3398 5141 12318;12319;12320;12321;12322;12323 14162;14163;14164;14165;14166;14167;14168 14166 7 ESAPSGKDDR Unmodified 1060.4785 0.47851608 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 1 3.5 0.5 1 1 26.909 26.909 3 0.0020033 5492 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.417 12.696 69.086 81.155 149.45 122.67 35.672 69.29 65 83 148 121 37 65 1 2 2 2 1 1 7229.6 5341 692 5142 12324;12325 14169;14170 14170 2 ESASYQEALAR Unmodified 1223.5782 0.57823012 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 43.096 43.096 2 9.5678E-14 13003 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.11 98.305 595.58 351.5 412.53 275.4 614.37 537.84 559 353 403 266 615 518 5 4 4 3 3 3 140470 5342 1304 5143 12326;12327;12328;12329;12330 14171;14172;14173;14174;14175 14173 5 ESCDSALR Unmodified 936.39709 0.39709463 1563 P47753;Q5RKN9 Capza1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 0 2 0.816 1 1 1 30.382 30.382 2 0.015661 7227 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.206 22.407 90.132 46 0 40.441 58.576 0 84 46 0 37 56 0 2 1 0 1 1 0 21249 5343 1563 5144 12331;12332;12333 14176;14177;14178 14177 3 ESCEAYR Unmodified 913.35998 0.35998084 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 2 0.816 1 1 1 27.465 27.465 2 0.019555 5637 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.74 50.281 93.603 65.728 132.08 69.265 95.576 0 88 69 129 69 93 0 2 2 3 2 2 0 34119 5344 1226 5145 12334;12335;12336 14179;14180;14181 14179 3 ESCLEAYTGIVQGLK Unmodified 1666.8236 0.82362212 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 7.5 0.5 1 1 77.464 77.464 3 5.519E-05 27414 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.551 67.523 39.25 85.045 37.096 30.604 0 98.072 37 83 37 28 0 92 1 2 1 1 0 2 12471 5345 1798 5146 12337;12338 14182;14183 14182 2 ESDAMFAAER Unmodified 1125.4761 0.47607323 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;B1ATY9 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 2.5 0.5 1 1 47.644 47.644 2 0.014547 15127 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.434 29.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5346 589 5147 12339;12340 14184;14185 14184 2 ESDDFLGQTIIEVR Unmodified 1620.7995 0.79951586 1121 H3BJZ7;Q4KUS2;E9Q263;A0A140LJ69;Q9Z1N9;A0A140LHX5 Unc13a;Unc13b Protein unc-13 homolog A;Protein unc-13 homolog B yes no 0 0 0 0 4 0 1 75.101 75.101 3 7.1371E-05 27707 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.887 55.791 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 2187.1 5347 1121 5148 12341 14186 14186 1 ESDGTPGGLASLENER Unmodified 1630.7435 0.74345755 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 1.5 0.5 1 1 53.371 53.371 3 4.5146E-12 17674 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.96 95.096 0 0 18.845 108.15 117.59 86.188 0 0 19 102 120 84 0 0 1 2 2 2 9189.1 5348 353 5149 12342;12343 14187;14188 14188 2 ESDIPASV Unmodified 816.38651 0.38651317 2120 Q61239 Fnta Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha yes yes 0 0 0 0 2 0 1 54.642 54.642 2 0.022365 18240 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.847 45.788 20.244 28.427 0 0 29.288 0 19 28 0 0 28 0 1 1 0 0 1 0 7264.9 5349 2120 5150 12344 14189 14189 1 ESDPTGPQR Unmodified 985.44649 0.44648767 363 A0A286YDE4;Q6PCN3 Ttbk1 Tau-tubulin kinase 1 yes no 0 0 0 0 1 0 1 25.359 25.359 2 0.0012919 4616 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.8 62.356 30.044 0 0 0 0 29.848 28 0 0 0 0 28 1 0 0 0 0 1 4772.7 5350 363 5151 12345 14190 14190 1 ESDSVLR Unmodified 804.39775 0.39774656 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 5.5 4.39 1 1 1 1 35.533 35.533 2 0.0038881 9954 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 148.98 39.878 922.42 894.36 1555.9 1241.9 1010.6 1604.3 870 919 1543 1234 1029 1532 3 4 6 5 5 6 456880 5351 1311 5152 12346;12347;12348;12349 14191;14192;14193;14194;14195;14196 14192 6 ESDTGLAPPALWDLAADK Unmodified 1868.9156 0.91560825 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 5.5 0.5 1 1 85.685 85.685 3 6.5752E-05 32065 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.564 26.94 20.005 18.05 87.664 45.807 18.062 29.333 19 19 84 47 19 28 1 1 2 2 1 1 7343.4 5352 1555 5153 12350;12351 14197;14198 14198 2 ESDWLQYR Unmodified 1095.4985 0.49852324 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 13 0 1 57.377 57.377 2 0.039289 19843 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.993 17.953 137.83 145.58 155.61 132.82 0 148.17 130 148 158 130 0 139 1 1 1 1 0 1 29182 5353 90 5154 12352 14199 14199 1 ESDWNQHK Unmodified 1042.4468 0.44682202 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 4 0 1 35.754 35.754 3 0.025912 9552 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.066 22.339 0 96.299 158.67 121.7 0 168.43 0 93 157 120 0 158 0 1 1 1 0 1 10053 5354 1157;2210 5155 12353 14200 14200 1 ESEASREDEYK Unmodified 1341.5685 0.56845329 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 1 1 0 1 33.394 33.394 3 0.055199 8279 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.894 34.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5355 3131 5156 12354 14201 14201 1 ESEAVEWQQK Unmodified 1232.5673 0.56733108 1452 P26041 Msn Moesin yes yes 0 0 0 0 4 0 1 50.459 50.459 3 0.0023973 16539 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.283 27.742 29.856 37.355 0 40.441 0 0 28 37 0 37 0 0 1 1 0 1 0 0 4155.6 5356 1452 5157 12355 14202 14202 1 ESEDGELLWR Unmodified 1232.5673 0.56733108 3154 Q9DCV4;A2AGJ2 Rmdn1 Regulator of microtubule dynamics protein 1 yes no 0 0 0 0 2 0 1 60.183 60.183 2 0.038787 20931 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.722 20.926 29.952 18.196 0 0 0 9.594 28 19 0 0 0 9 1 1 0 0 0 1 1347 5357 3154 5158 12356 14203 14203 1 ESEDYSPLIR Unmodified 1207.5721 0.57208211 1165 O08759;A0A0J9YUK0 Ube3a Ubiquitin-protein ligase E3A yes no 0 0 0 0 3 0 1 52.944 52.944 2 4.0899E-05 18014 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.67 79.668 69.032 63.399 66.178 0 93.248 86.883 65 65 65 0 92 84 2 2 2 0 2 2 3832.4 5358 1165 5159 12357 14204;14205 14205 2 ESEEMGGK Unmodified 865.34875 0.34874746 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 3 0.707 1 2 1 36.441 36.441 2;3 0.0047675 9860 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.37 83.108 89.814 83.018 144.74 139.87 278.16 180.48 84 84 139 139 278 176 2 3 2 3 4 3 21418 5359 1424 5160 12358;12359;12360;12361 14206;14207;14208;14209 14209 4 ESEEQKR Unmodified 904.42502 0.42502394 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 4 0 1 22.34 22.34 3 0.061001 3637 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.837 26.613 0 39.368 0 49.65 33.379 88.592 0 37 0 46 37 84 0 1 0 1 1 1 5238.7 5360 1458 5161 12362 14210 14210 1 ESEIIDFFLGASLK Unmodified 1567.8134 0.81337501 1449 P25444;D3YVC1;D3YWJ3 Rps2 40S ribosomal protein S2 yes no 0 0 0 0 8 0 1 102.06 102.06 3 0.0012752 36027 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.607 38.356 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5361 1449 5162 12363 14211 14211 1 ESENARPR Unmodified 957.46281 0.46280643 2307 Q80TZ9;B1AS11 Rere Arginine-glutamic acid dipeptide repeats protein yes no 0 0 0 1 1 0 1 16.644 16.644 3 0.025076 2699 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.464 37.72 4.2613 6.0967 0 4.2576 6.0804 0 4 6 0 4 6 0 1 1 0 1 1 0 372.27 5362 2307 5163 12364 14212 14212 1 ESEPQAAADATEVK Unmodified 1444.6682 0.66816734 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 2.93 2.82 3 6 4 1 1 45.896 45.896 2;3;4 5.8219E-95 14528 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 225.97 166.62 2739.4 3436.3 4310.7 3747.6 6675.4 5436.7 2588 3445 4334 3771 6717 5275 17 19 21 21 20 20 1261600 5363 2769 5164 12365;12366;12367;12368;12369;12370;12371;12372;12373;12374;12375;12376;12377;12378;12379 14213;14214;14215;14216;14217;14218;14219;14220;14221;14222;14223;14224;14225;14226;14227;14228;14229;14230;14231;14232;14233;14234;14235;14236;14237 14224 25 ESESAPGDFSLSVK Unmodified 1451.678 0.67800374 585 Q60631;B1AT92 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 4.5 0.5 1 1 62.116 62.116 2 8.4173E-07 21749 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.63 75.296 0 0 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 2 5099 5364 585 5165 12380;12381 14238;14239 14239 2 ESESCDCLQGFQLTHSLGGGTGSGMGTLLISK Unmodified 3326.5217 0.52172616 2283;2975 Q7TMM9;Q9CWF2 Tubb2a;Tubb2b Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 7 0.816 1 1 1 78.069 78.069 4 3.0765E-20 27706 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.117 50.805 147.89 116.89 131.52 84.504 99.172 175.19 139 121 130 84 102 167 3 3 3 2 2 3 56215 5365 2283;2975 5166 12382;12383;12384 14240;14241;14242;14243 14242 4 ESESVDK Unmodified 792.35013 0.35012766 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 2.5 0.5 1 1 33.976 33.976 2 0.012879 9163 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.9 40.869 177.02 233.17 167.78 271.5 374.75 176.92 167 233 180 264 376 176 2 2 2 2 2 2 29652 5366 2079 5167 12385;12386 14244;14245 14245 2 ESEVLIGNLGDK Unmodified 1272.6561 0.65614609 1192 O35382 Exoc4 Exocyst complex component 4 yes yes 0 0 0 0 5 0 1 65.122 65.122 3 0.0044577 23043 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.448 27.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5367 1192 5168 12387 14246 14246 1 ESFESQFLADTER Unmodified 1557.6947 0.69471644 1935 Q3TPM3;Q9WTX6 Cul1 Cullin-1 yes no 0 0 0 0 4 0 1 66.989 66.989 2 0.00010213 24063 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.522 50.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5368 1935 5169 12388 14247 14247 1 ESFWITSFLCSTK Unmodified 1604.7545 0.75447993 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 11 0 1 91.87 91.87 3 0.00049066 29475 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.989 48.156 29.904 27.776 0 15.302 0 0 28 28 0 14 0 0 1 1 0 1 0 0 3604.7 5369 343 5170 12389 14248 14248 1 ESGAAEQVDNK Unmodified 1146.5153 0.51529551 2352 Q810B6 Ankfy1 Rabankyrin-5 yes yes 0 0 0 0 3 0 1 36.792 36.792 3 0.0027803 10557 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.829 34.037 39.219 26.164 58.824 0 38.702 0 37 28 56 0 37 0 1 1 1 0 1 0 3199.5 5370 2352 5171 12390 14249 14249 1 ESGCAAAGETEAAAATAFR Unmodified 1839.8057 0.80574023 2445 Q8BR63 Fam177a1 Protein FAM177A1 yes yes 0 0 0 0 3 0 1 55.333 55.333 3 1.4118E-05 19150 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.447 44.615 0 20.216 0 29.75 45.403 39.212 0 19 0 28 46 38 0 1 0 1 1 1 3768.8 5371 2445 5172 12391 14250 14250 1 ESGDVLLSGADIFAELGEVISGAK Unmodified 2376.206 0.20603619 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 8.75 2.49 2 1 1 114.72 114.72 3;4 1.0351E-22 37985 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 119.94 93.732 15.915 26.323 18.2 8.6794 27.978 32.337 15 26 18 9 28 31 3 4 3 2 3 3 13505 5372 1223 5173 12392;12393;12394;12395 14251;14252;14253;14254;14255 14251 5 ESGDVLLSGADIFAELGEVISGAKPAHCEK Unmodified 3098.523 0.52303001 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 1 6.8 0.748 2 2 1 97.257 97.257 4;5 1.6913E-13 36631 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.782 53.117 67.857 91.722 95.137 75.055 17.334 131.95 64 92 93 74 18 124 3 4 2 4 2 3 16539 5373 1223 5174 12396;12397;12398;12399;12400 14256;14257;14258;14259;14260 14257 5 ESGEGAEAEGATAEGAK Unmodified 1562.6696 0.6696239 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 0 1.67 0.471 1 2 38.967 38.967 3;4 2.031E-10 11373 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 116 88.029 78.708 0 116.67 92.421 127.8 134.93 74 0 112 92 130 130 3 0 3 2 2 3 20845 5374 1461 5175 12401;12402;12403 14261;14262;14263 14262 3 ESGHSLK Unmodified 756.37662 0.37661719 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 6 0 1 28.739 28.739 3 0.042024 5427 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.787 23.681 49.128 45.631 0 39.019 75.612 0 46 46 0 37 74 0 1 1 0 1 1 0 1664.6 5375 2379 5176 12404 14264 14264 1 ESGLHSFEQVK Unmodified 1259.6146 0.61461563 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 5 0 1 48.095 48.095 3 0.0041032 15109 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.225 26.926 69.57 34.677 0 80.882 0 59.696 65 37 0 74 0 56 1 1 0 1 0 1 3212.2 5376 2753 5177 12405 14265 14265 1 ESGSDAWK Unmodified 878.37701 0.37701112 3122 Q9DBF1;G3UYR8 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 6 0 1 44.112 44.112 2 0.037023 12596 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.073 23.204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5377 3122 5178 12406 14266 14266 1 ESGTDFPIPAVPPGTDPETEK Unmodified 2183.027 0.027009197 1477 P28661 Sept4 Septin-4 yes yes 0 0 0 0 3.67 0.471 1 2 71.296 71.296 3;4 3.9708E-11 26139 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.499 49.196 29.667 17.403 48.578 0 84.818 39.144 28 19 46 0 84 38 1 1 1 0 3 2 9289.1 5378 1477 5179 12407;12408;12409 14267;14268;14269;14270;14271 14270 5 ESHSILTPLVSLDTPGK Unmodified 1792.9571 0.95707914 2899 Q9CPV4;E9Q197 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 6 0 1 68.814 68.814 3 9.345E-07 24196 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.26 83.594 29.139 65.581 96.544 0 75.428 57.544 28 65 93 0 74 56 1 1 1 0 1 1 4283.7 5379 2899 5180 12410 14272 14272 1 ESIAEVQEMEK Unmodified 1291.5966 0.5965823 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 3 0 1 57.267 57.267 3 0.002481 20047 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.418 43.164 20.195 38.006 0 20.252 27.359 29.067 19 37 0 19 28 28 1 1 0 1 1 1 2377.9 5380 553 5181 12411 14273 14273 1 ESIDLVLDR Unmodified 1058.5608 0.56078914 3223 Q9JJZ2 Tuba8 Tubulin alpha-8 chain yes yes 0 0 0 0 4 0 1 64.285 64.285 2 0.0090415 22826 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.605 39.413 0 54.264 0 0 0 59.696 0 51 0 0 0 56 0 1 0 0 0 1 6783.6 5381 3223 5182 12412 14274 14274 1 ESIESEIR Unmodified 961.47164 0.47163978 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 4.75 4.82 1 1 1 1 44.669 44.669 2 0.00060022 14191 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 151.04 75.846 473.84 415.06 440.88 442.1 434.38 411.87 446 417 445 436 445 398 5 4 4 5 4 5 164600 5382 1875 5183 12413;12414;12415;12416 14275;14276;14277;14278;14279 14278 5 ESIESEIRR Unmodified 1117.5728 0.57275081 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 3 0.816 1 1 1 39.202 39.202 3 0.00036774 11666 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.06 67.161 147.07 163.52 254.33 223.19 228.33 231.2 139 167 254 222 233 223 1 2 2 2 1 2 31546 5383 1875 5184 12417;12418;12419 14280;14281;14282 14281 3 ESIIDVEGVVR Unmodified 1214.6507 0.65066678 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4.5 0.5 1 1 65.926 65.926 2 1.7978E-07 23622 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.55 67.286 69.206 63.885 36.403 28.434 0 49.036 65 65 37 28 0 46 2 2 1 1 0 1 9710.6 5384 2803 5185 12420;12421 14283;14284 14283 2 ESKDPADETEAD Unmodified 1305.5208 0.5208344 1619 P54227 Stmn1 Stathmin yes yes 0 0 0 1 1 0 1 38.178 38.178 3 0.024769 10456 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.12 28.694 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 60611 5385 1619 5186 12422 14285 14285 1 ESKDQLSEDASK Unmodified 1335.6154 0.61540349 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 1 5 0 1 42.212 42.212 3 0.013529 12194 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.051 25.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5386 1882 5187 12423 14286 14286 1 ESKEETPEVTK Unmodified 1275.6194 0.61942623 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 4.5 0.5 1 1 40.698 40.698 3 0.001661 11857 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.894 48.882 216.82 87.219 273.91 0 131.72 232.89 204 93 259 0 130 222 2 1 2 0 1 2 13900 5387 1382 5188 12424;12425 14287;14288 14287 2 ESKEETPGTEWEK Unmodified 1548.6944 0.69438209 2197 Q6IRU5 Cltb Clathrin light chain B yes yes 0 0 0 1 6 3.58 1 1 2 1 47.94 47.94 3;4 1.1689E-07 14938 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.88 71.086 340.27 628.1 629.4 410.49 711.56 478.36 320 613 629 414 714 463 4 5 5 4 5 3 76481 5388 2197 5189 12426;12427;12428;12429;12430 14289;14290;14291;14292;14293;14294 14292 6 ESLAAIEQR Unmodified 1015.5298 0.52982336 111 A0A0J9YTW6;B1AWN6;F7AMU5 Scn2a1 Sodium channel protein yes no 0 0 0 0 4 0 1 48.174 48.174 3 0.01567 15434 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.276 25.89 0 38.901 27.962 0 29.288 0 0 37 28 0 28 0 0 1 1 0 1 0 1746.8 5389 111 5190 12431 14295 14295 1 ESLDVYELDPK Unmodified 1306.6293 0.62926264 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 4 0 1 68.093 68.093 3 0.0012863 24398 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.408 39.803 0 0 0 0 37.384 38.375 0 0 0 0 37 37 0 0 0 0 1 1 5986.1 5390 3342 5191 12432 14296 14296 1 ESLEQAQSR Unmodified 1046.4993 0.49925152 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 3 0.816 1 1 1 32.558 32.558 2 0.0061289 8544 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.263 45.437 59.359 103.95 34.361 106.63 149.25 19.208 56 102 37 102 148 19 2 2 1 3 3 1 11537 5391 62 5192 12433;12434;12435 14297;14298;14299 14298 3 ESLHNNPANR Unmodified 1150.5479 0.54793304 3221 Q9JJV5 Cacng3 Voltage-dependent calcium channel gamma-3 subunit yes yes 0 0 0 0 4 0 1 24.463 24.463 3 0.0062601 4488 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.548 26.804 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1808.9 5392 3221 5193 12436 14300 14300 1 ESLIDGIK Unmodified 873.48075 0.48074791 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 6.75 0.829 2 1 1 65.67 65.67 2;3 0.0030658 22423 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.265 0 187.04 406.28 274.18 146.64 196.34 349.38 176 398 279 139 194 333 2 4 3 1 2 4 25858 5393 1594 5194 12437;12438;12439;12440 14301;14302;14303;14304 14303 4 ESLIDGIKR Unmodified 1029.5819 0.58185894 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 1 9.25 2.28 1 1 1 1 57.098 57.098 3 0.00081301 19547 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.25 0 799.1 570.25 646.38 809.31 947.6 899.31 751 586 660 792 971 869 4 3 3 4 4 4 86815 5394 1594 5195 12441;12442;12443;12444 14305;14306;14307;14308 14308 4 ESLLEDIQANNALGDEVEAIVK Unmodified 2369.1962 0.19619979 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 4 0 1 93.906 93.906 3 0.065326 34246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 25.67 9.904 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 771.31 5395 490 5196 12445 14309 14309 1 ESLLFEGR Unmodified 949.4869 0.48689592 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 58.341 58.341 2 0.0012219 19393 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.9 71.766 800.61 376.6 787.41 603.28 761.02 607.85 752 382 771 600 774 586 3 2 3 3 4 2 170720 5396 1055 5197 12446;12447;12448;12449 14310;14311;14312;14313 14311 4 ESLLPIAK Unmodified 869.52222 0.52221879 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 8 0 1 65.166 65.166 2 0.061464 20993 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.478 26.474 98.234 129.16 151.89 0 0 197.21 93 130 148 0 0 185 1 1 1 0 0 1 10466 5397 2783 5198 12450 14314 14314 1 ESLPSTVSANSLYEPEGER Unmodified 2063.9647 0.96474329 409 D4AFX6;A0A338P6P6;Q6ZQK5 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 4 0 1 61.097 61.097 3 7.7074E-05 21432 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.185 39.693 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2463.2 5398 409 5199 12451 14315 14315 1 ESLQQLAEVTR Unmodified 1272.6674 0.66737948 1166 O08795 Prkcsh Glucosidase 2 subunit beta yes yes 0 0 0 0 5 0 1 60.313 60.313 2 0.015215 20922 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.175 17.553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5399 1166 5200 12452 14316 14316 1 ESLSGQAAAR Unmodified 988.49377 0.49377221 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 31.889 31.889 2 7.0874E-29 7735 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 195.57 110.41 162.07 173.54 217.73 223 322.24 218.93 152 172 213 218 320 214 3 2 4 4 4 4 72892 5400 2958 5201 12453;12454;12455;12456;12457 14317;14318;14319;14320;14321 14318 5 ESLSGQAAARPLVATVGLNVPASVR Unmodified 2462.3605 0.3605202 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 1 7 0 1 66.023 66.023 4 0.01277 22034 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.265 16.186 59.509 74.147 34.482 18.024 36.555 38.399 56 74 37 19 37 37 1 1 1 1 1 1 2448.9 5401 2958 5202 12458 14322 14322 1 ESLSYVVESIEK Unmodified 1381.6977 0.69767655 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 6 0 1 76.601 76.601 3 0.00044454 27877 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.953 38.872 49.358 0 0 20.767 0 49.036 46 0 0 19 0 46 1 0 0 1 0 1 1558 5402 2773 5203 12459 14323 14323 1 ESLTEVSETVTQHK Unmodified 1586.7788 0.77878042 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 5 0 1 55.296 55.296 3 0.00011896 18524 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.075 73.799 39.293 0 68.512 36.358 0 59.696 37 0 65 37 0 56 1 0 1 1 0 1 7159.8 5403 2886 5204 12460 14324 14324 1 ESLTLIVEGKPQIK Unmodified 1553.9029 0.90285872 897 E9Q4G8;E9Q3Q6;Q61490;F6QH25 Alcam CD166 antigen yes no 0 0 0 1 7 0 1 68.194 68.194 4 0.0021593 23110 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.956 38.123 0 29.792 0 49.219 56.315 0 0 28 0 46 56 0 0 1 0 1 1 0 2260.1 5404 897 5205 12461 14325 14325 1 ESLWPFLIDKR Unmodified 1402.7609 0.76088593 2858 Q99LB6 Mat2b Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 1 11 0 1 77.523 77.523 3 0.047665 23406 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.257 19.871 60.088 0 0 0 0 59.696 56 0 0 0 0 56 1 0 0 0 0 1 6522.8 5405 2858 5206 12462 14326 14326 1 ESNCYDPER Unmodified 1168.4455 0.44550139 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 1 0 2 32.842 32.842 2 2.6719E-18 8005 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.78 120.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5406 2185 5207 12463;12464 14327;14328 14327 2 ESNPALGIDCLHK Unmodified 1452.7031 0.70311306 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 5 0 1 54.814 54.814 4 0.0079281 18261 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.481 21.627 0 0 38.797 27.777 27.343 19.474 0 0 37 28 28 19 0 0 1 1 1 1 1739.5 5407 1825 5208 12465 14329 14329 1 ESNSNQCVYAAHNSVVIDECK Unmodified 2423.0482 0.048172119 1544;502 A2APL5;F6ZRK3;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 4 0.707 1 2 1 49.106 49.106 3;4 3.4558E-11 15648 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.606 66.237 29.744 125.05 100.88 114.91 79.592 126.71 28 121 103 112 84 121 1 4 3 4 3 3 20012 5408 502;1544 5209 12466;12467;12468;12469 14330;14331;14332;14333 14332 4 ESNSNQCVYAAHNSVVIDECK 2 Deamidation (N) 2425.0162 0.016203289 1544;502 A2APL5;F6ZRK3;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 2 0 0 3 0 1 53.653 53.653 4 0.002761 18268 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.848 28.355 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 2801.8 5409 502;1544 5209 12470 14334 14334 126;127 1 ESNSNQCVYAAHNSVVIDECK Deamidation (N) 2424.0322 0.032187704 1544;502 A2APL5;F6ZRK3;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 1 0 0 3 0 1 51.928 51.928 3 1.6641E-05 17593 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.107 44.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5410 502;1544 5209 12471 14335 14335 126;127 1 ESNSSLTGQLAELESDR Unmodified 1834.8545 0.85446456 138 A0A0N4SW14;E6Y2W7;D3Z165;E6Y2W6;E9QP94;Q3TVA9;F6VCV9 Ccdc136 Coiled-coil domain-containing protein 136 yes no 0 0 0 0 2.5 0.5 1 1 65.276 65.276 3 5.049E-06 23602 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.872 44.843 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 1103.4 5411 138 5210 12472;12473 14336;14337 14337 2 ESNTELAEDCEIK Unmodified 1536.6614 0.6613674 155 D3YTY9;A0A0R4J038;O08677 Kng1 Kininogen-1;Kininogen-1 heavy chain;Bradykinin;Kininogen-1 light chain yes no 0 0 0 0 2 0 1 50.751 50.751 3 1.6474E-07 16500 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.837 63.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5412 155 5211 12474 14338 14338 1 ESNTVFSFLGLKPR Unmodified 1593.8515 0.85149185 34 A0A087WS96;Q8BG73 Sh3bgrl2 SH3 domain-binding glutamic acid-rich-like protein;SH3 domain-binding glutamic acid-rich-like protein 2 yes no 0 0 0 1 10.8 0.829 2 1 1 76.21 76.21 3;4 8.3255E-12 20331 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.62 112.93 364.82 229.19 535.54 306.98 407.1 436.1 343 232 522 304 417 420 3 4 5 2 4 4 101780 5413 34 5212 12475;12476;12477;12478 14339;14340;14341;14342;14343 14343 5 ESNVEEEVWHFLR Unmodified 1672.7845 0.7845345 2743 Q91VM9 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes yes 0 0 0 0 4 0 1 76.143 76.143 3 0.00014612 28198 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.209 47.934 30.044 0 0 0 19.874 0 28 0 0 0 19 0 1 0 0 0 1 0 2805.8 5414 2743 5213 12479 14344 14344 1 ESNVQEVR Unmodified 959.46722 0.46722311 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 4.75 4.82 1 1 1 1 29.518 29.518 2 2.2987E-10 6859 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 173.48 85.779 860.68 414.38 527.15 396.05 604.55 662.74 807 440 519 389 610 636 6 5 5 3 4 4 357900 5415 1731;1787 5214 12480;12481;12482;12483 14345;14346;14347;14348;14349;14350 14347 6 ESPDYSQR Unmodified 980.41994 0.41993856 3120 Q9DBE0;A0A2R8VHN7 Csad Cysteine sulfinic acid decarboxylase yes no 0 0 0 0 2 0 1 29.228 29.228 2 0.050181 6794 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.565 42.058 0 0 0 0 28.291 29.041 0 0 0 0 28 28 0 0 0 0 1 1 2509.9 5416 3120 5215 12484 14351 14351 1 ESPESEGPIYEGLIL Unmodified 1631.793 0.7930335 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 89.999 89.999 2 3.1027E-05 31898 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.4 87.062 22.214 38.86 9.1674 33.778 20.218 7.3029 21 37 9 31 20 7 4 2 1 2 2 2 14911 5417 3174 5216 12485;12486;12487;12488 14352;14353;14354;14355;14356 14353 5 ESPEVLLTLDILK Unmodified 1468.8389 0.83886148 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7 0 1 92.31 92.31 3 0.020397 34190 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.401 25.176 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 866.77 5418 3204 5217 12489 14357 14357 1 ESPPQPPADDGAEEPGSETSDAK Unmodified 2309.9772 0.97715847 46 A0A0A0MQC7;A2A5Y6;P10637;B1AQW5;B1AQW6 Mapt Microtubule-associated protein;Microtubule-associated protein tau yes no 0 0 0 0 1.33 0.471 2 1 46.772 46.772 3;4 7.1504E-12 13872 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.905 58.675 142.52 155.16 136.41 132.32 186.51 49.036 134 157 134 130 181 46 2 4 2 2 2 1 29061 5419 46 5218 12490;12491;12492 14358;14359;14360;14361;14362 14359 5 ESPQDSAITR Unmodified 1102.5255 0.52546627 532 A2AWA9 Rabgap1 Rab GTPase-activating protein 1 yes yes 0 0 0 0 2 1 1 1 34.074 34.074 2 0.0014512 9283 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.653 57.275 39.169 35.265 87.42 25.918 55.37 58.683 37 37 84 28 56 56 1 2 2 1 2 1 6517.4 5420 532 5219 12493;12494 14363;14364 14364 2 ESPQHPR Unmodified 849.40931 0.4093143 2586 Q8K124 Plekho2 Pleckstrin homology domain-containing family O member 2 yes yes 0 0 0 0 3 0 1 16.147 16.147 3 0.0065981 2402 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.377 58.454 2.1246 1.9522 1.9473 1.9943 4.0231 2.0172 2 2 2 2 4 2 1 1 1 1 1 1 501.37 5421 2586 5220 12495 14365 14365 1 ESPSHGLELSAPEK Unmodified 1479.7205 0.72053726 2890 Q99PU5;D3Z1Z2;D3Z2G8 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes no 0 0 0 0 5 0 1 48.095 48.095 3 0.0011831 15058 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.885 34.031 69.468 54.9 0 0 46.477 47.71 65 56 0 0 46 46 1 1 0 0 1 1 3865.8 5422 2890 5221 12496 14366 14366 1 ESPSPSGPEDK Unmodified 1128.4935 0.49349744 477 F6WF36;A2AJI1;A8Y5P4;A2AJI0 Map7d1 MAP7 domain-containing protein 1 yes no 0 0 0 0 2 0 1 37.433 37.433 3 0.023912 10531 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.843 21.941 0 19.729 29.112 0 0 20.254 0 19 28 0 0 19 0 1 1 0 0 1 2756.8 5423 477 5222 12497 14367 14367 1 ESPVSAGHDAYVDLDR Unmodified 1729.7907 0.79074209 2461 Q8BUK6 Hook3 Protein Hook homolog 3 yes yes 0 0 0 0 2 0 1 50.446 50.446 3 2.7838E-06 16352 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.341 63.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5424 2461 5223 12498 14368 14368 1 ESQAALEER Unmodified 1031.4884 0.48835248 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 1.5 0.5 1 1 33.285 33.285 2 0.0010744 8188 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.35 57.028 108.26 118.73 98.916 84.824 0 118.33 102 120 102 83 0 111 1 1 1 1 0 1 34949 5425 3176 5224 12499;12500 14369;14370 14369 2 ESQAYYDGR Unmodified 1087.4571 0.45705235 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 3.5 0.5 1 1 34.573 34.573 2 3.6194E-12 9498 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 174.42 136 423.19 223.26 460.86 236.02 446.96 394.46 398 235 450 242 448 382 3 1 3 2 2 2 55744 5426 1307 5225 12501;12502 14371;14372;14373 14372 3 ESQAYYDGRR Unmodified 1243.5582 0.55816338 1307 P04925 Prnp Major prion protein yes yes 0 0 0 1 3 0 1 28.738 28.738 3 0.017848 6802 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.721 33.635 0 23.941 31.737 32.562 27.792 0 0 23 32 32 28 0 0 1 1 1 1 0 1757.9 5427 1307 5226 12503 14374 14374 1 ESQDLKEELVAAVEDVR Unmodified 1928.9691 0.96910039 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 1 4 0 1 82.921 82.921 3 2.4718E-05 31423 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.468 63.602 0 0 0 39.785 34.858 58.701 0 0 0 37 37 56 0 0 0 1 1 1 2486.2 5428 799 5227 12504 14375 14375 1 ESQEQGLR Unmodified 945.45157 0.45157304 3239 Q9JKY5 Hip1r Huntingtin-interacting protein 1-related protein yes yes 0 0 0 0 1 0 1 27.447 27.447 2 0.045506 5530 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.465 30.641 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 8531.3 5429 3239 5228 12505 14376 14376 1 ESQISAEIELLPTNDK Unmodified 1785.8996 0.89962384 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 4 0.816 1 1 1 73.015 73.015 3 0.00012916 26804 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.449 38.869 49.173 56.919 0 99.757 100.61 56.825 46 56 0 93 102 56 2 2 0 3 2 2 20719 5430 1836 5229 12506;12507;12508 14377;14378;14379 14378 3 ESQLQEADSQVDLVR Unmodified 1715.8326 0.83260691 946 E9QAQ3;Q6ZQ82 Arhgap26 Rho GTPase-activating protein 26 yes no 0 0 0 0 2.5 0.5 1 1 56.295 56.295 3 2.1607E-05 19044 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.535 60.14 0 49.706 18.048 29.528 0 50.102 0 47 19 28 0 47 0 2 1 1 0 2 7896.2 5431 946 5230 12509;12510 14380;14381 14380 2 ESQSHPGDFVLSVR Unmodified 1556.7583 0.75831975 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 4 0 1 50.656 50.656 3 0.03558 16573 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.345 10.644 0 0 59.433 26.013 55.752 47.445 0 0 56 28 56 46 0 0 1 1 1 1 2567.5 5432 1512 5231 12511 14382 14382 1 ESQSPDTTIQR Unmodified 1260.5946 0.59460847 2365 Q8BFY9;Q3TKD0;J3QMX2 Tnpo1 Transportin-1 yes no 0 0 0 0 2.5 0.5 1 1 33.198 33.198 2;3 0.0021444 8549 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.08 22.085 29.729 17.575 38.054 17.412 57.776 0 28 19 37 19 56 0 1 1 1 1 1 0 6212.4 5433 2365 5232 12512;12513 14383;14384 14383 2 ESQYQNLR Unmodified 1036.4938 0.49377221 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 4 0 1 35.436 35.436 2 0.0035186 9379 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.41 53.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5434 553 5233 12514 14385 14385 1 ESSDQNFDYMFK Unmodified 1509.6082 0.60820962 1761 P63011 Rab3a Ras-related protein Rab-3A yes yes 0 0 0 0 6.8 3.19 1 1 2 1 68.203 68.203 2;3 3.1231E-15 24538 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.59 116.03 577.08 374.8 553 564.26 579.72 669.96 542 395 552 549 601 644 5 5 4 4 6 6 77654 5435 1761 5234 12515;12516;12517;12518;12519 14386;14387;14388;14389;14390;14391 14387 6 ESSDSTNTTIEDEDAK Unmodified 1740.7174 0.71736196 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 13 0 1 42.555 42.555 3 4.4783E-17 12691 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.52 109.89 0 0 190.43 0 97.278 0 0 0 176 0 93 0 0 0 1 0 1 0 18613 5436 1475 5235 12520 14392 14392 1 ESSDSTNTTIEDEDAKAR Unmodified 1967.8556 0.85558677 1475 P28652;Q5SVI0;Q5SVI2;Q5SVI3;Q5SVI9 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 1 1 0 1 39.197 39.197 3 0.010273 10868 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.382 26.616 0 0 38.774 28.293 0 0 0 0 37 28 0 0 0 0 1 1 0 0 1614 5437 1475 5236 12521 14393 14393 1 ESSEESGEFDDLVSALR Unmodified 1868.8276 0.82758111 2443 Q8BPM0 Daam1 Disheveled-associated activator of morphogenesis 1 yes yes 0 0 0 0 3 0 1 76.896 76.896 3 2.3189E-12 29077 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.47 106.18 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 1374.7 5438 2443 5237 12522 14394 14394 1 ESSEQVQPTCPK Unmodified 1388.6242 0.62419403 86 A0A0G2JDX4;A0A0G2JEZ7;Q9D1X8;Q922J6 Tspan2 Tetraspanin;Tetraspanin-2 yes no 0 0 0 0 5.75 4.21 2 1 1 38.723 38.723 2;3;4 3.5344E-07 11595 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.616 58.672 99.435 125.47 36.979 97.383 187.04 165.3 93 121 37 93 185 158 2 2 1 2 2 2 29406 5439 86 5238 12523;12524;12525;12526 14395;14396;14397;14398 14396 4 ESSESTNTTIEDEDTK Unmodified 1784.7436 0.74357671 1355 P11798;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 13 0 1 42.049 42.049 3 1.0888E-42 12440 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 170.22 136.52 157.79 0 170.16 0 118.5 204.49 148 0 158 0 120 195 1 0 1 0 1 1 36701 5440 1355 5239 12527 14399 14399 1 ESSESTNTTIEDEDTKVR Unmodified 2039.9131 0.91310165 1355 P11798;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 1 3.83 4.18 2 1 2 1 41.627 41.627 3;4 3.1651E-57 11826 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 178 154.4 306.42 326.66 290.65 148.9 212 285.35 288 331 291 148 215 270 6 7 5 3 4 4 137530 5441 1355 5240 12528;12529;12530;12531;12532;12533 14400;14401;14402;14403;14404;14405;14406 14400 7 ESSESTNTTIEDEDTKVR Deamidation (N) 2040.8971 0.89711724 1355 P11798;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 1 0 1 1 0 1 43.282 43.282 3 1.492E-09 12230 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.96 81.603 0 29.484 18.424 8.1951 28.912 0 0 28 19 9 28 0 0 1 1 1 1 0 4986.5 5442 1355 5240 12534 14407 14407 425 1 ESSIENEIAVLR Unmodified 1358.7042 0.70415892 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 3.5 0.5 1 1 66.71 66.71 2 2.6999E-05 23873 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.407 59.368 69.388 27.172 36.989 68.84 0 39.442 65 28 37 65 0 37 2 1 1 2 0 1 10139 5443 2468 5241 12535;12536 14408;14409 14409 2 ESSILAK Unmodified 746.41742 0.41741937 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 9.5 3.5 1 1 49 49 2 0.012395 15103 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.93 45.7 326.68 519.16 723.34 756.98 696.43 881.96 307 520 730 744 728 846 1 2 2 2 2 2 93178 5444 1400;1401 5242 12537;12538 14410;14411 14410 2 ESSLIDLK Unmodified 903.49131 0.49131259 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 9.5 3.5 1 1 61.946 61.946 2 0.01151 20973 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.143 4.001 98.996 80.55 64.998 0 104.08 75.914 93 83 65 0 102 74 1 1 1 0 1 1 5681.7 5445 2249 5243 12539;12540 14412;14413 14412 2 ESSLTEPVIVGLLK Unmodified 1483.8498 0.84976052 2733 Q91V89 Ppp2r5d yes yes 0 0 0 0 7 0 1 83.676 83.676 3 3.1996E-05 30415 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.469 56.864 0 48.944 0 0 46.807 38.106 0 46 0 0 46 37 0 1 0 0 1 1 3645.7 5446 2733 5244 12541 14414 14414 1 ESSPFINSTDTEK Unmodified 1453.6573 0.6572683 2727 Q91V14;A0A076FR46;A0A0J9YU26;A0A0J9YV84 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 4 0.707 1 2 1 54.134 54.134 3 2.4959E-19 17926 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.57 111.78 256.41 196.43 199.7 154.18 98.035 164.56 241 204 203 149 102 157 3 3 3 2 1 2 27663 5447 2727 5245 12542;12543;12544;12545 14415;14416;14417;14418 14416 4 ESSPLYSPGFSDSTSAAK Unmodified 1829.8319 0.8319382 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6 0 1 59.372 59.372 3 8.7506E-10 19841 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.58 84.847 59.441 64.243 54.379 46.216 43.656 68.044 56 65 56 46 46 65 1 1 1 1 1 1 9092.7 5448 1382 5246 12546 14419 14419 1 ESSPSHPTR Unmodified 996.46247 0.46247208 2550 Q8CHW4 Eif2b5 Translation initiation factor eIF-2B subunit epsilon yes yes 0 0 0 0 2.5 0.5 1 1 17.251 17.251 3 0.00020194 2662 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 106.88 72.494 12.817 5.946 4.7989 10.444 10.634 11.423 12 6 5 10 11 11 2 1 1 2 2 2 892 5449 2550 5247 12547;12548 14420;14421 14420 2 ESSTPEEFSR Unmodified 1167.5044 0.50439648 676 F6SBR5;D3Z1U0;E9QL53;D3YU89;P49025 Cit Citron Rho-interacting kinase yes no 0 0 0 0 2.5 0.5 1 1 38.839 38.839 2 2.5321E-05 11191 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.31 95.516 39.656 8.9279 0 28.996 114.77 0 37 9 0 28 111 0 2 1 0 1 2 0 10988 5450 676 5248 12549;12550 14422;14423 14422 2 ESSTVFELK Unmodified 1038.5233 0.523341 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 5.5 0.5 1 1 61.325 61.325 3 0.00024735 21318 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.17 64.122 79.657 37.055 106.06 37.592 0 49.036 75 37 102 37 0 46 2 1 2 1 0 1 11154 5451 1749 5249 12551;12552 14424;14425 14424 2 ESSVYDISEHR Unmodified 1320.5946 0.59460847 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 3 0 1 40.681 40.681 3 0.049566 12415 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.995 20.175 0 19.548 39.943 0 19.874 0 0 19 38 0 19 0 0 1 1 0 1 0 4020.5 5452 1089 5250 12553 14426 14426 1 ESTELRAEEIENR Unmodified 1574.7536 0.7536283 639 F7CYX4;B8QI34;Q8BSS9 Ppfia2 Liprin-alpha-2 yes no 0 0 0 1 1.5 0.5 1 1 40.462 40.462 3 0.00029701 11296 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.169 53.606 83.221 43.688 42.403 0 0 44.772 78 47 42 0 0 42 2 2 2 0 0 2 6355 5453 639 5251 12554;12555 14427;14428 14427 2 ESTESSNTTIEDEDVK Unmodified 1782.7643 0.76431215 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;Q8CCM0 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 1 0 1 46.061 46.061 3 3.3326E-06 13582 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.39 83.578 48.865 44.901 44.773 46.224 73.669 46.934 46 46 46 46 74 46 1 1 1 1 1 1 6397 5454 103 5252 12556 14429 14429 1 ESTFLDEGPNEQEITPLQHTPR Unmodified 2537.2034 0.20341043 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5 4.05 1 2 1 1 61.547 61.547 3;4 8.2739E-35 21938 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 137.73 121.64 99.047 154.82 27.781 59.436 64.393 118.34 93 150 28 55 65 112 4 5 2 3 3 5 54365 5455 510 5253 12557;12558;12559;12560;12561 14430;14431;14432;14433;14434;14435;14436;14437 14432 8 ESTGAQVQVAGDMLPNSTER Unmodified 2088.9746 0.97459647 1668;394;1647 P60335;Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8W6U6;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VI15;P57722;E9Q7D8 Pcbp1;Pcbp2;Pcbp3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 0 6.67 4.5 1 1 1 56.436 56.436 3 8.6511E-23 19760 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.18 111.79 39.554 56.798 55.11 45.693 88.999 58.13 37 56 55 46 89 56 2 2 2 2 3 1 21195 5456 1668;394;1647 5254 12562;12563;12564 14438;14439;14440 14438 3 ESTLEAIGYICQDIDPEQLQDK Unmodified 2564.1952 0.19521351 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 6.2 3.43 2 2 1 85.78 85.78 3;4 7.5516E-15 32717 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.156 64.735 0 108.33 75.356 20.767 0 103.54 0 103 74 19 0 98 0 4 2 1 0 4 17880 5457 1798 5255 12565;12566;12567;12568;12569 14441;14442;14443;14444;14445;14446 14444 6 ESTLHLVLR Unmodified 1066.6135 0.61349341 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 0 7 0.816 1 1 1 51.435 51.435 3 3.0772E-06 16049 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 149.57 94.786 177.31 183.26 297.94 258.75 349.75 191.01 167 186 297 259 352 185 2 2 3 3 3 2 138110 5458 58 5256 12570;12571;12572 14447;14448;14449 14447 3 ESTNFPVIVDR Unmodified 1275.6459 0.64591575 1962 Q3U5Q7 Cmpk2 UMP-CMP kinase 2, mitochondrial yes yes 0 0 0 0 5 0 1 59.359 59.359 2 0.028714 20460 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.567 23.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5459 1962 5257 12573 14450 14450 1 ESTPTYGK Unmodified 881.41306 0.41306227 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 5 0 1 38.958 38.958 2 0.014947 10675 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.498 45.692 0 47.816 67.461 0 0 39.442 0 46 65 0 0 37 0 1 1 0 0 1 2367 5460 2339 5258 12574 14451 14451 1 ESTSFQDVGPQAPVGSVYQK Unmodified 2123.0171 0.017113212 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7.25 3.34 2 1 1 62.653 62.653 3;4 1.0388E-10 21351 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.189 67.114 78.363 130.05 178.78 77.455 148 94.685 74 130 176 74 148 92 2 4 4 1 3 2 27061 5461 2154 5259 12575;12576;12577;12578 14452;14453;14454;14455 14454 4 ESTTSEQSAR Unmodified 1094.484 0.48399538 484;2493 A2AKU9;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 13 0 1 20.471 20.471 2 3.3471E-16 3004 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 179.09 127.66 10.57 20.408 9.5423 0 31.725 20.415 10 20 10 0 31 20 1 1 1 0 1 1 3012.2 5462 484;2493 5260 12579 14456 14456 1 ESTVTLQQAEYEFLSFVR Unmodified 2146.0582 0.058249745 299 A0A1L1SS58;Q9D8S4 Rexo2 Oligoribonuclease, mitochondrial yes no 0 0 0 0 5 0 1 98.271 98.271 3 2.7064E-08 35802 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.676 60.004 0 3.0322 9.5561 0 2.9212 6.3126 0 3 9 0 3 6 0 1 1 0 1 1 882.46 5463 299 5261 12580 14457 14457 1 ESVDAEEVVR Unmodified 1131.5408 0.54078198 847 E9PXF0 Pcdh17 yes yes 0 0 0 0 1 0 1 44.841 44.841 2 0.00018962 12958 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.965 54.453 29.856 37.355 0 0 0 39.442 28 37 0 0 0 37 1 1 0 0 0 1 4932.4 5464 847 5262 12581 14458 14458 1 ESVEIINK Unmodified 930.50221 0.50221163 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 5 0 1 53.332 53.332 2 0.019852 17534 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.334 25.168 69.745 0 0 59.485 91.597 85.864 65 0 0 56 93 83 1 0 0 1 1 1 4721.3 5465 1489 5263 12582 14459 14459 1 ESVEQQADSFK Unmodified 1266.5728 0.57281039 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 3.5 0.5 1 1 51.666 51.666 3 9.0226E-06 17454 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.09 72.971 88.499 45.374 55.651 95.645 84.734 59.696 83 46 56 92 83 56 2 1 1 2 1 1 16334 5466 1653 5264 12583;12584 14460;14461 14460 2 ESVFTVEGGHR Unmodified 1216.5836 0.58364985 1179 O35129 Phb2 Prohibitin-2 yes yes 0 0 0 0 5 0 1 42.696 42.696 3 1.0106E-10 12352 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.22 115.58 29.904 27.776 0 0 46.477 47.71 28 28 0 0 46 46 1 1 0 0 1 1 6981.7 5467 1179 5265 12585 14462 14462 1 ESVGGSPQSK Unmodified 974.46689 0.46688876 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 13 0 1 33.757 33.757 2 0.000164 8412 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.788 66.237 0 0 0 48.49 95.051 0 0 0 0 46 93 0 0 0 0 1 1 0 4414.7 5468 3344 5266 12586 14463 14463 1 ESVLPGAPGSGLESSLAEVFPVGK Unmodified 2326.2056 0.20564226 2480 Q8BZA9 Tigar Fructose-2,6-bisphosphatase TIGAR yes yes 0 0 0 0 6 0 1 90.002 90.002 3 0.002118 33997 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.187 17.422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5469 2480 5267 12587 14464 14464 1 ESVLTATSILNNPIVK Unmodified 1697.9564 0.95635086 166 D3YXQ7;A0A0R4J098;O88291 Zfp326;Znf326 DBIRD complex subunit ZNF326 yes no 0 0 0 0 9 0 1 80.504 80.504 3 0.00046046 27614 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.723 36.85 59.386 64.091 63.705 55.666 92.762 57.049 56 65 65 56 93 56 1 1 1 1 1 1 4535.5 5470 166 5268 12588 14465 14465 1 ESVPDFPLSPPK Unmodified 1311.6711 0.67106787 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 0 5.5 0.5 1 1 69.115 69.115 3 0.001269 24964 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.57 22.144 119.66 101.83 0 167.83 200.47 181.9 112 102 0 157 205 176 3 2 0 3 3 3 7968.8 5471 1619 5269 12589;12590 14466;14467;14468 14466 3 ESVQVPDDQDFR Unmodified 1433.6423 0.64228694 829 G3UYN6;G3UYM0;G3UY59;G3UW37;E9PVP0;Q9JMD3 Stard10 PCTP-like protein yes no 0 0 0 0 3 0 1 52.745 52.745 2 0.0058183 17900 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.727 36.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5472 829 5270 12591 14469 14469 1 ESVSLAGTPSDETLATDPLGLAK Unmodified 2271.1482 0.14818696 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 4.5 0.5 1 1 79.297 79.297 3;4 8.4571E-10 29664 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.454 58.353 29.807 56.51 0 20.767 8.727 49.853 28 55 0 19 9 47 1 2 0 1 1 2 4692.5 5473 1669 5271 12592;12593 14470;14471 14470 2 ESVVSGDDR Unmodified 962.4305 0.43050325 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 2 0 1 32.732 32.732 2 0.0010269 8330 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 106.91 50.101 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 4237.8 5474 1382 5272 12594 14472 14472 1 ESWEPVK Unmodified 873.42323 0.42323303 2301 Q80TJ1;K4DI76;J3QJW3 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 5.33 0.471 2 1 52.911 52.911 2;3 0.024587 17381 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.64 33.662 257.07 244.84 229.15 132.09 223.45 184.15 242 250 232 130 222 176 3 3 3 2 2 2 19261 5475 2301 5273 12595;12596;12597 14473;14474;14475 14474 3 ESYDYLK Unmodified 916.41781 0.4178133 779 D3Z645;Q9QZ88;D3YYD5;D3YW98 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 0 5.5 0.5 1 1 53.304 53.304 2 0.027113 16865 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.065 28.865 168.31 155.52 74.107 59.847 136.66 174.12 158 158 74 56 139 167 2 2 1 1 2 2 17583 5476 779 5274 12598;12599 14476;14477 14477 2 ESYIPTVEDTYR Unmodified 1471.6831 0.68308912 2055 Q5PR73 Diras2 GTP-binding protein Di-Ras2 yes yes 0 0 0 0 4 0 1 59.643 59.643 2 0.0024266 20793 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.435 40.496 9.5993 0 9.6896 0 0 0 9 0 9 0 0 0 1 0 1 0 0 0 4600.1 5477 2055 5275 12600 14478 14478 1 ESYPVFYLFR Unmodified 1319.655 0.65502388 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 0 10 0 1 84.04 84.04 2 0.0127 26617 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.582 36.774 29.952 18.196 0 20.332 23.124 0 28 19 0 19 23 0 1 1 0 1 1 0 3010.4 5478 1649 5276 12601 14479 14479 1 ESYSIYVYK Unmodified 1150.5546 0.55464113 2541 Q8CGP0;Q9D2U9;Q64524 Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E yes no 0 0 0 0 7 0 1 61.968 61.968 2 0.00098302 20179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.062 55.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5479 2541 5277 12602 14480 14480 1 ESYSVYVYK Unmodified 1136.539 0.53899107 1349;1350 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;Q6ZWY9;Q64525;Q64478;P10854 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M no no 0 0 0 0 8 2.27 2 2 1 1 1 58.513 58.513 2;3 2.9791E-12 19441 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 175.38 125.56 1148.2 1602.4 1749 1834.7 2410.3 2165.8 1081 1603 1766 1804 2456 2094 6 7 6 6 8 7 364410 5480 1349;1350 5278 12603;12604;12605;12606;12607;12608;12609 14481;14482;14483;14484;14485;14486;14487;14488;14489 14481 9 ESYVETELIFALAK Unmodified 1611.8396 0.83958976 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.36 3.46 2 1 2 3 1 1 1 1 1 1 92.558 92.558 2;3 1.345E-11 36636 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.34 92.537 383.57 322.67 390.5 438.39 284.06 258.66 359 313 392 420 287 247 16 9 16 16 13 10 54218 5481 2185 5279 12610;12611;12612;12613;12614;12615;12616;12617;12618;12619;12620;12621;12622;12623 14490;14491;14492;14493;14494;14495;14496;14497;14498;14499;14500;14501;14502;14503;14504;14505;14506;14507;14508;14509;14510;14511;14512;14513;14514;14515 14513 26 ESYVNLCSNPEDK Unmodified 1553.6668 0.66678713 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 4 0 1 54.96 54.96 3 0.047969 18652 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.77 21.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5482 823 5280 12624 14516 14516 1 ETAAACGEK Unmodified 935.40185 0.40184566 2152 Q62348 Tsn Translin yes yes 0 0 0 0 3.5 0.5 1 1 32.899 32.899 2 0.0056753 8745 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.749 40.64 59.544 54.818 44.916 28.434 0 59.696 56 56 46 28 0 56 2 2 2 1 0 2 4088.5 5483 2152 5281 12625;12626 14517;14518 14517 2 ETAAAHQASSSPPIDAATAEPYGFR Unmodified 2544.1881 0.18809472 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3.5 0.5 1 1 53.701 53.701 3 8.5696E-12 18034 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.303 62.411 0 19.744 28.261 19.083 0 20.254 0 19 28 19 0 19 0 1 1 1 0 1 5009.8 5484 1382 5282 12627;12628 14519;14520 14520 2 ETADTDTADQVMASFK Unmodified 1728.7512 0.75124504 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 4.5 0.5 1 1 70.41 70.41 3 0.0003273 25468 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.962 43.55 0 0 49.772 0 27.961 38.644 0 0 46 0 28 37 0 0 1 0 1 1 14767 5485 418 5283 12629;12630 14521;14522 14521 2 ETAEADVASLNR Unmodified 1274.6103 0.61025853 1106;1107;906 E9Q453;G5E8R0;E9Q455;G5E8R1 Tpm1 no no 0 0 0 0 4.6 4.32 1 1 1 1 1 46.077 46.077 2;3 1.4965E-140 14485 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 257.4 199.44 548.53 425.69 347.22 578.49 278.97 633.77 515 435 349 553 284 602 5 5 3 6 3 6 105060 5486 906;1106;1107 5284 12631;12632;12633;12634;12635 14523;14524;14525;14526;14527;14528 14525 6 ETAEADVASLNR Deamidation (N) 1275.5943 0.59427411 1106;1107;906 E9Q453;G5E8R0;E9Q455;G5E8R1 Tpm1 no no 0 1 0 0 1 0 1 48.691 48.691 2 0.011247 14618 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.355 30.659 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5487 906;1106;1107 5284 12636 14529 14529 246 1 ETAEEVSAR Unmodified 990.4618 0.46180338 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;F7ALC8;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 13 0 1 30.74 30.74 2 9.4451E-06 6995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.34 67.129 84.597 33.664 0 0 61.136 47.291 79 37 0 0 60 46 1 1 0 0 1 1 5921 5488 1424 5285 12637 14530 14530 1 ETAENNLK Unmodified 917.44543 0.44542503 2137 Q61699;D3Z3I9;A0A0J9YTZ7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 4 0 1 38.338 38.338 2 0.0059211 10655 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.17 61.041 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 4022.5 5489 2137 5286 12638 14531 14531 1 ETAESVLK Unmodified 875.46001 0.46001246 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 4 0 1 48.635 48.635 2 0.022988 15609 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.478 18.666 0 38.633 43.968 78.262 0 59.696 0 37 46 74 0 56 0 1 1 1 0 1 2554.2 5490 1957 5287 12639 14532 14532 1 ETAFDEEMHLPR Unmodified 1473.6558 0.65582851 666 D2DFA9;Q923Z0 Gprc5b G-protein coupled receptor family C group 5 member B yes no 0 0 0 0 3 0 1 55.84 55.84 3 4.0293E-12 19395 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.86 90.432 30.044 0 0 0 28.62 19.437 28 0 0 0 28 19 1 0 0 0 1 1 5129.4 5491 666 5288 12640 14533 14533 1 ETAFEFLSSA Unmodified 1100.5026 0.50260556 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 7.75 3.11 1 1 1 1 86.466 86.466 2 4.3696E-05 33177 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.16 95.653 68.211 80.457 213.64 122.78 232.67 128.39 64 80 201 120 227 122 3 3 4 5 4 5 179020 5492 1373 5289 12641;12642;12643;12644 14534;14535;14536;14537;14538;14539;14540 14535 7 ETAGSSGSTPEGR Unmodified 1234.5426 0.5425729 2381 Q8BGQ1 Vipas39 Spermatogenesis-defective protein 39 homolog yes yes 0 0 0 0 1 0 1 24.387 24.387 2 2.0827E-07 4296 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.76 93.194 24.44 12.756 29.407 0 33.472 0 23 14 28 0 32 0 1 1 1 0 1 0 6871.6 5493 2381 5290 12645 14541 14541 1 ETAHWKPPPWNDVDILK Unmodified 2045.0371 0.037060793 2754 Q91WD5;D3YXT0;A0A0A6YW30 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 1 7.5 0.5 1 1 69.918 69.918 4 0.003115 23067 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.998 26.461 157.33 221.6 239.02 171.71 245.05 279.76 148 222 241 167 251 269 1 2 2 1 2 2 16322 5494 2754 5291 12646;12647 14542;14543 14543 2 ETAIELGYLTAEQFDEWVKPK Unmodified 2466.2319 0.23185701 1857 P97807;H3BKG7 Fh;Fh1 Fumarate hydratase, mitochondrial yes no 0 0 0 1 8 3 1 2 1 94.61 94.61 3;4 3.8462E-07 37676 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.784 36.648 84.587 9.576 49.31 72.587 31.851 19.188 79 9 46 68 31 18 2 1 2 4 1 1 23641 5495 1857 5292 12648;12649;12650;12651 14544;14545;14546;14547;14548 14548 5 ETALLIDPK Unmodified 998.56481 0.56481189 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F7ANF4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 6 0 1 63.807 63.807 2 0.02249 21792 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.823 21.375 88.485 0 96.487 82.905 109.7 75.754 83 0 93 83 111 74 1 0 1 1 1 1 10941 5496 1899 5293 12652 14549 14549 1 ETAPERR Unmodified 857.43553 0.43552905 1903 Q14BI2;A0A0J9YU95 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 1 1.5 0.5 1 1 17.066 17.066 3 0.0089778 2652 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.31 8.6188 36.252 14.133 26.735 15.743 8.0764 17.892 34 16 26 16 9 17 2 2 1 1 1 1 2050.1 5497 1903 5294 12653;12654 14550;14551 14551 2 ETAPTSTYSSPAR Unmodified 1366.6365 0.63647328 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 5.2 3.97 1 1 2 1 36.222 36.222 2;3 4.98E-42 10301 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 197.94 142.83 143.92 93.63 77.771 44.814 82.752 140.21 135 93 74 46 83 135 4 2 1 1 2 4 46437 5498 2585 5295 12655;12656;12657;12658;12659 14552;14553;14554;14555;14556 14553 5 ETATAPTDPPAPTST Unmodified 1455.6729 0.67291837 1273 O88696 Clpp ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 0 2 0.816 1 1 1 46.697 46.697 2;3 9.5544E-11 15107 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.06 98.666 9.6006 0 72.807 40.454 59.171 66.536 9 0 69 42 60 64 1 0 3 3 2 3 21461 5499 1273 5296 12660;12661;12662 14557;14558;14559 14559 3 ETCLITFLLAGIECPR Unmodified 1891.9536 0.95359044 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 9.5 0.5 1 1 102.8 102.8 3 2.7841E-05 36400 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.508 61.027 6.4187 3.8232 0 6.558 0 14 6 4 0 6 0 14 1 1 0 1 0 1 2416.9 5500 2276 5297 12663;12664 14560;14561 14560 2 ETCSTLTESPR Unmodified 1279.5714 0.57143018 1100 G5E896;Q3UJB9 Edc4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 0 3 0 1 37.162 37.162 2 0.0038913 10754 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.621 28.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5501 1100 5298 12665 14562 14562 1 ETDFEHR Unmodified 932.39881 0.39880919 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 2 0.816 1 1 1 29.71 29.71 3 0.0020457 6908 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.13 79.045 108.81 122.21 186.66 199.17 208.87 271.2 102 121 186 196 214 260 3 3 3 4 2 3 97521 5502 1357 5299 12666;12667;12668 14563;14564;14565;14566 14564 4 ETDGAPSGPGPR Unmodified 1139.5207 0.52071524 2623 Q8QZT2 Ccsap Centriole, cilia and spindle-associated protein yes yes 0 0 0 0 1.8 0.748 2 2 1 31.531 31.531 2;3 1.1983E-12 8064 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.75 94.325 99.267 123.32 26.483 79.738 112.41 58.697 93 122 28 75 111 56 4 4 1 2 2 2 19551 5503 2623 5300 12669;12670;12671;12672;12673 14567;14568;14569;14570;14571 14571 5 ETDGSETPEPFAAEAK Unmodified 1677.737 0.73697519 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 2 0.816 1 1 1 55.861 55.861 3 9.4275E-06 19342 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.38 78.578 39.34 86.084 38.246 0 121.5 96.755 37 84 37 0 121 93 1 2 1 0 4 3 17892 5504 2276 5301 12674;12675;12676 14572;14573;14574;14575 14575 4 ETDGTEGTVEIETVK Unmodified 1606.7574 0.75737628 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 2.29 0.881 1 4 1 1 56.052 56.052 2;3 7.1966E-22 18876 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.24 98.97 109.7 124.42 150.74 175.96 183.66 164.82 103 122 149 169 187 159 4 4 5 5 5 4 84396 5505 2302 5302 12677;12678;12679;12680;12681;12682;12683 14576;14577;14578;14579;14580;14581;14582;14583 14579 8 ETDPSPEER Unmodified 1058.4516 0.45163262 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 13 0 1 28.276 28.276 2 0.0066024 5775 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.713 41.552 20.157 0 38.672 28.299 0 0 19 0 37 28 0 0 1 0 1 1 0 0 3850.9 5506 526 5303 12684 14584 14584 1 ETDSSSAPAVTPSK Unmodified 1375.6467 0.64670362 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 5 0 1 42.621 42.621 3 0.029061 12213 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.028 15.982 0 29.173 37.019 28.398 0 20.254 0 28 37 28 0 19 0 1 1 1 0 1 2672 5507 853 5304 12685 14585 14585 1 ETDVAEDDVDSVEEMEVK Unmodified 2037.8572 0.85722626 1125 H7BWY8 Tsr2 yes yes 0 0 0 0 1 0 1 68.194 68.194 3 5.4908E-06 23079 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.918 47.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5508 1125 5305 12686 14586 14586 1 ETDYPAGEELSESGQVDK Unmodified 1952.8487 0.84871048 2039 Q58A65;Z4YMB8;A0A0R4J196;F8WH31;E9PUD1;F6SH61;F6WNT4 Spag9 C-Jun-amino-terminal kinase-interacting protein 4 yes no 0 0 0 0 2 0 1 55.233 55.233 3 0.044781 18622 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 30.684 12.767 20.387 0 0 0 0 39.442 19 0 0 0 0 37 1 0 0 0 0 1 3146.6 5509 2039 5306 12687 14587 14587 1 ETEAALEFAQTQLAEQGEESR Unmodified 2336.0768 0.076812936 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 3.5 0.5 1 1 72.895 72.895 3 0.0047845 27217 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 39.188 25.596 0 0 20.558 20.411 18.936 9.594 0 0 19 19 19 9 0 0 1 1 1 1 4156.9 5510 3079 5307 12688;12689 14588;14589 14588 2 ETECTYFSTPLLLGK Unmodified 1757.8546 0.8545879 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 8.36 2.35 2 3 3 1 2 80.084 80.084 2;3;4 2.82E-11 28669 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.67 98.454 974.63 768.2 978.77 645.37 1170 1029.7 916 791 969 639 1179 994 9 11 10 8 12 11 504220 5511 1327 5308 12690;12691;12692;12693;12694;12695;12696;12697;12698;12699;12700 14590;14591;14592;14593;14594;14595;14596;14597;14598;14599;14600;14601;14602;14603 14594 14 ETEGDVTSVK Unmodified 1063.5033 0.50333384 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 3.67 0.471 1 2 43.13 43.13 2;3 3.5647E-05 12973 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.5 69.93 88.25 140.69 75.332 81.975 0 187.62 83 139 74 75 0 176 1 2 1 1 0 3 29582 5512 1543 5309 12701;12702;12703 14604;14605;14606 14606 3 ETEGWDIVPENK Unmodified 1415.6569 0.65687437 1937 Q3TVK3;Q9Z2W0;Q8BPW9;A0A087WS31;A0A087WSE6;A0A087WNX3;A0A087WSD3;A0A087WRC1 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 4 0 1 64.932 64.932 3 0.057454 23052 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.768 23.724 0 0 30.296 0 19.874 0 0 0 28 0 19 0 0 0 1 0 1 0 1878.5 5513 1937 5310 12704 14607 14607 1 ETELELK Unmodified 860.44911 0.44911343 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 4 0 1 53.845 53.845 2 0.02833 18141 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.616 13.489 187.02 177.36 156.19 192.9 0 0 176 181 163 185 0 0 1 1 1 1 0 0 14656 5514 575 5311 12705 14608 14608 1 ETELELR Unmodified 888.45526 0.45526144 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 2 0 1 46.916 46.916 2 0.036372 14711 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 81.191 12.276 39.029 45.063 74.715 55.048 90.775 115.74 37 46 74 56 93 111 1 1 1 1 1 1 14649 5515 895 5312 12706 14609 14609 1 ETENDDLTNVIQK Unmodified 1517.7209 0.72093119 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 3 0 1 59.778 59.778 3 0.00090562 21187 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.092 31.888 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5516 3164 5313 12707 14610 14610 1 ETEPVSR Unmodified 816.39775 0.39774656 1967 Q3UE92;Q6P1B1 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 1 0 1 26.639 26.639 2 0.015486 5124 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.14 47.823 109.03 0 69.78 0 97.278 0 102 0 65 0 93 0 1 0 1 0 1 0 82363 5517 1967 5314 12708 14611 14611 1 ETESAPGSPR Unmodified 1029.4727 0.47270242 2265 Z4YJT3;Q6ZQ58 Larp1 La-related protein 1 yes no 0 0 0 0 1.5 0.5 1 1 27.703 27.703 2 0.0033501 5640 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.95 44.475 9.612 8.9279 20.558 9.4841 28.175 19.719 9 9 19 9 28 19 1 1 1 1 2 1 3504.1 5518 2265 5315 12709;12710 14612;14613 14612 2 ETEVIDPQDLLEGR Unmodified 1612.7944 0.79443049 1218 O35988 Sdc4 Syndecan-4 yes yes 0 0 0 0 2.5 0.5 1 1 74.543 74.543 3 0.0010435 27001 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.196 42.61 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 4516.2 5519 1218 5316 12711;12712 14614;14615 14614 2 ETFHLVLK Unmodified 985.55967 0.55966693 2452 Q8BSZ2 Ap3s2 AP-3 complex subunit sigma-2 yes yes 0 0 0 0 8 0 1 59.111 59.111 3 0.0090296 18206 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.252 38.738 39.117 35.594 67.997 0 66.005 57.813 37 37 65 0 65 56 1 1 1 0 1 1 2680.7 5520 2452 5317 12713 14616 14616 1 ETFLTSPEELYR Unmodified 1483.7195 0.71947463 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 68.977 68.977 2 6.2928E-13 24262 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.89 97.366 59.628 97.43 104.72 94.611 98.645 137.61 56 92 102 92 102 131 1 2 2 2 3 3 22620 5521 2420 5318 12714;12715;12716;12717 14617;14618;14619;14620 14619 4 ETFTAQNR Unmodified 965.45666 0.45665842 2508 Q8C729 Fam126b Protein FAM126B yes yes 0 0 0 0 5 0 1 34.486 34.486 2 0.04846 8477 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.265 34.691 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 1273.2 5522 2508 5319 12718 14621 14621 1 ETGANLAICQWGFDDEANHLLLQNGLPAVR Deamidation (N) 3322.6041 0.6040743 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 1 0 0 5 0 1 87.088 87.088 4 4.485E-05 33277 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.612 32.405 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2106.9 5523 1825 5320 12719 14622 14622 741 1 ETGDGIILEVLDAYK Unmodified 1634.8403 0.84031805 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 5.5 0.5 1 1 94.609 94.609 3 4.4822E-05 35774 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.692 62.134 9.5947 33.642 5.682 9.4984 0 0 9 34 6 9 0 0 1 2 1 1 0 0 3469.3 5524 3285 5321 12720;12721 14623;14624 14624 2 ETGERPSNEEIMR Unmodified 1546.7046 0.70456962 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 1 1.5 0.5 1 1 34.353 34.353 3 0.00031445 8627 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.457 54.272 0 19.729 58.561 19.012 0 20.254 0 19 56 19 0 19 0 1 2 1 0 1 7571.4 5525 3395 5322 12722;12723 14625;14626 14625 2 ETGSAIEAEELVR Unmodified 1402.694 0.69398816 2271 Q71M36 Cspg5 Chondroitin sulfate proteoglycan 5 yes yes 0 0 0 0 2 0.816 1 1 1 56.116 56.116 2 7.0031E-23 18995 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 161.99 119.99 90.016 0 48.56 77.116 104.48 39.442 84 0 47 75 102 37 2 0 2 3 2 1 20806 5526 2271 5323 12724;12725;12726 14627;14628;14629 14628 3 ETGTEHSPGVQPADVK Unmodified 1650.7849 0.78492843 711 D3YWY5;D3Z442;D3YZD8;Q8R0P4 Aamdc Mth938 domain-containing protein yes no 0 0 0 0 3.5 0.5 1 1 39.72 39.72 3 1.0198E-05 11926 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.148 61.571 0 38.738 37.71 0 0 49.036 0 37 37 0 0 46 0 1 1 0 0 1 3859.9 5527 711 5324 12727;12728 14630;14631 14630 2 ETGVDLTK Unmodified 861.44436 0.4443624 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 5 0 1 48.685 48.685 2 0.0012661 15337 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.5 44.01 273.8 229.49 315.92 243.37 296.83 320.92 258 238 316 245 305 309 1 1 1 1 1 1 21264 5528 1533 5325 12729 14632 14632 1 ETGWASFSEFTSSLSTK Unmodified 1863.8527 0.85267365 1108 G5E8R4;Q922D4;A0A286YCG3;A0A286YE88 Ppp6r3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 yes no 0 0 0 0 8 0 1 83.803 83.803 3 0.023685 29843 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.852 17.019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5529 1108 5326 12730 14633 14633 1 ETGYPLAVK Unmodified 976.52295 0.52294707 1641 Q3U4W8;P56399;D3YYA5;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 8.5 2.69 1 1 1 1 55.393 55.393 2 0.0024189 17152 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.099 53.119 147.89 389.92 201.05 445.03 515.38 296.69 139 379 204 427 522 287 2 4 2 4 4 3 41044 5530 1641 5327 12731;12732;12733;12734 14634;14635;14636;14637 14635 4 ETHEIVALK Unmodified 1038.571 0.5709599 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 0 5 0 1 47.262 47.262 3 0.0046599 14643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.691 0 39.416 0 47.953 36.379 64.002 67.464 37 0 46 37 65 65 1 0 1 1 1 1 3534.8 5531 78 5328 12735 14638 14638 1 ETHEIVALKR Unmodified 1194.6721 0.67207093 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 1 6 0 1 40.777 40.777 4 0.018174 11105 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.261 27.474 69.034 53.693 73.968 56.8 0 88.478 65 56 74 56 0 83 1 1 1 1 0 1 3117.4 5532 78 5329 12736 14639 14639 1 ETHKPLGDWR Unmodified 1237.6204 0.62036971 2548 Q8CHT0 Aldh4a1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 0 1 6 0 1 41.691 41.691 4 0.021134 11416 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.194 32.136 0 78.736 0 48.92 72.189 86.418 0 74 0 46 74 83 0 1 0 1 1 1 3084 5533 2548 5330 12737 14640 14640 1 ETHNAAIIMK Unmodified 1126.5805 0.58047873 2930 Q9CQI3;A0A2I3BPS1 Gmfb Glia maturation factor beta yes no 0 0 0 0 6 0.816 1 1 1 43.699 43.699 3 5.1477E-05 12410 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.456 69.714 137.67 148.19 0 139.21 95.051 59.696 129 148 0 129 93 56 2 2 0 2 1 1 14299 5534 2930 5331 12738;12739;12740 14641;14642;14643 14642 3 ETHQQVVSR Unmodified 1082.5469 0.54687041 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 0 6.67 4.5 1 1 1 21.711 21.711 3 0.00021335 3382 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.2 36.387 59.803 12.684 52.852 73.517 49.748 79.596 56 12 52 71 52 76 1 1 2 3 2 3 12087 5535 1815 5332 12741;12742;12743 14644;14645;14646 14645 3 ETHYENYR Unmodified 1110.473 0.47303677 1477 P28661 Sept4 Septin-4 yes yes 0 0 0 0 6 4.97 1 1 1 28.148 28.148 3 0.0031567 6355 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.426 65.656 89.777 26.4 65.39 106.42 62.357 185.84 84 28 65 102 65 176 2 1 2 2 1 3 16709 5536 1477 5333 12744;12745;12746 14647;14648;14649 14647 3 ETICSQDER Unmodified 1136.4768 0.47680152 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 4.75 4.82 1 1 1 1 31.432 31.432 2 2.8109E-08 7383 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 166.09 109.04 257.13 123.67 149.83 76.204 271.99 180.96 241 130 149 74 269 176 4 3 3 1 4 4 73997 5537 3336 5334 12747;12748;12749;12750 14650;14651;14652;14653;14654 14650 5 ETIELVHTEPTNVAQLPSR Unmodified 2133.1066 0.10659692 3361 Q9Z0P5;A0A1L1STC8;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 4 0 1 58.996 58.996 3 1.1969E-07 20545 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.15 75.071 49.358 0 0 71.045 0 49.036 46 0 0 65 0 46 1 0 0 1 0 1 11264 5538 3361 5335 12751 14655 14655 1 ETIEQEK Unmodified 875.42363 0.42362696 1421 P20065;CON__P21752;Q9D2R9;A2AEH9 Tmsb4x;Tmsb15a Thymosin beta-4;Hematopoietic system regulatory peptide no no 0 0 0 0 4.43 3.58 2 2 2 1 39.283 39.283 2;3 4.0662E-16 11238 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 187.34 66.692 945.92 832.98 705.14 1464.4 2179.4 2673 886 852 707 1411 2199 2571 5 6 5 6 5 8 460830 5539 1421 5336 12752;12753;12754;12755;12756;12757;12758 14656;14657;14658;14659;14660;14661;14662;14663 14661 8 ETIFELEDQVEQHR Unmodified 1771.8377 0.83769228 110 A0A0J9YTU3;Q5SXY1;A0A0J9YUF8;A0A0J9YUR2;A0A0J9YV86;A0A0J9YUG8;A0A0J9YV47 Specc1 Cytospin-B yes no 0 0 0 0 3 0 1 67.579 67.579 3 1.1425E-21 24777 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.51 111.19 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 5218.6 5540 110 5337 12759 14664 14664 1 ETIFSISK Unmodified 923.4964 0.49639797 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 65.563 65.563 2 0.0062455 21242 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.71 61.866 48.713 249.11 363.9 258.38 240.01 340.48 46 241 361 250 241 324 1 3 4 2 3 3 24211 5541 1653 5338 12760;12761;12762;12763 14665;14666;14667;14668 14666 4 ETILSQK Unmodified 817.45453 0.45453316 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 7 0 1 49.399 49.399 2 0.04914 14165 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.774 2.7994 108.17 89.334 139.02 122.87 0 138.58 102 93 139 120 0 130 1 1 1 1 0 1 7957.5 5542 2160 5339 12764 14669 14669 1 ETIPLQESTLYTEDR Unmodified 1793.8683 0.86832371 1268 O88531 Ppt1 Palmitoyl-protein thioesterase 1 yes yes 0 0 0 0 8.5 4.5 1 1 62.72 62.72 3 2.8484E-11 22304 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.4 100.52 79.128 101.25 0 121.32 0 0 74 103 0 111 0 0 1 2 0 1 0 0 24090 5543 1268 5340 12765;12766 14670;14671 14670 2 ETISEGK Unmodified 762.37595 0.37594848 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 7.33 4.03 1 1 1 38.186 38.186 2;3 0.0063356 10361 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.56 45.141 339.81 351.95 372.36 343.66 134.46 515.3 320 357 385 333 139 487 2 2 3 2 1 2 56684 5544 2014 5341 12767;12768;12769 14672;14673;14674 14674 3 ETKDTDIVDEAIYYFK Unmodified 1948.9306 0.93058962 1126 H7BWZ3;Q9JM76;A0A0G2JFK7 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 1 5.75 0.829 2 1 1 85.76 85.76 3;4 1.8115E-05 32755 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.2 73.78 128.32 156.74 199.6 135.95 25.097 207.15 121 158 195 130 28 195 2 3 3 3 1 2 18188 5545 1126 5342 12770;12771;12772;12773 14675;14676;14677;14678 14675 4 ETLAQTVLAEVPTQMVSYFR Unmodified 2282.1617 0.16166896 633 B7ZCP4;Q8C166 Cpne1 Copine-1 yes no 0 0 0 0 9 0 1 98.593 98.593 3 0.0036477 35263 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.987 24.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5546 633 5343 12774 14679 14679 1 ETLEEVFEK Unmodified 1122.5445 0.54447038 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 5 0 1 70.692 70.692 2 0.00060349 25699 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.22 41.996 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5547 1333 5344 12775 14680 14680 1 ETLEPLIQAAQLLQVK Unmodified 1793.0299 0.02985015 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 9.8 1.72 1 2 1 1 97.208 97.208 3;4 3.5589E-17 31835 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.32 114.77 57.845 9 63.787 38.445 27.631 48.248 56 9 60 37 28 46 4 1 2 2 1 1 22495 5548 728 5345 12776;12777;12778;12779;12780 14681;14682;14683;14684;14685;14686;14687 14686 7 ETLEQAK Unmodified 817.41815 0.41814765 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 41.284 41.284 2 0.03034 12131 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.011 17.589 59.671 0 70.029 0 97.278 0 56 0 65 0 93 0 1 0 1 0 1 0 5222.2 5549 3266 5346 12781 14688 14688 1 ETLEYFSTLK Unmodified 1229.618 0.61796967 3203 Q9JHK4;A0A2K6EDL0 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 0 7.5 0.5 1 1 72.79 72.79 3 0.00083355 24584 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.655 52.996 20.292 18.848 57.892 56.375 73.495 38.423 19 19 55 56 74 37 1 1 1 2 2 1 6490.3 5550 3203 5347 12782;12783 14689;14690 14690 2 ETLGQIWALANR Unmodified 1370.7306 0.73064844 1008 F6YUG5;V9GXD9;V9GX40;Q5SV85 Synrg Synergin gamma yes no 0 0 0 0 9.5 0.5 1 1 77.194 77.194 3 0.0001999 23723 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.531 43.725 0 0 0 20.767 0 39.442 0 0 0 19 0 37 0 0 0 1 0 1 2697.9 5551 1008 5348 12784;12785 14691;14692 14692 2 ETLGTGAFSEVVLAEEK Unmodified 1778.8938 0.89381018 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 5 0 1 77.074 77.074 2 0.0012174 28765 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.471 32.273 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1170.4 5552 2468 5349 12786 14693 14693 1 ETLIGIYER Unmodified 1092.5815 0.58152458 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 5.5 0.5 1 1 61.847 61.847 2 0.011719 21643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.233 42.004 119.66 34.378 58.229 59.981 122.84 28.204 112 37 56 56 121 28 2 1 1 1 2 1 6587.9 5553 281 5350 12787;12788 14694;14695 14694 2 ETLILITNGLHAR Unmodified 1449.8304 0.83036248 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 7 0 1 69.805 69.805 3 0.053505 23883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.968 9.1763 39.402 26.672 27.677 18.405 37.857 0 37 28 28 19 37 0 1 1 1 1 1 0 2049.6 5554 3194 5351 12789 14696 14696 1 ETLLLLLK Unmodified 941.61612 0.61611918 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 10 0.816 1 1 1 86.411 86.411 2 0.022008 27757 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.058 0 0 28.68 66.546 46.312 28 0 0 28 65 46 28 0 0 1 1 1 1 0 10089 5555 2841 5352 12790;12791;12792 14697;14698;14699 14698 3 ETLPAEQDLTTK Unmodified 1344.6773 0.67727546 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 4.5 0.5 1 1 56.665 56.665 2;3 3.5511E-10 19438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 115.57 67.751 69.165 73.483 35.276 0 67.031 27.935 65 74 37 0 65 28 1 1 1 0 1 1 5954.6 5556 3313 5353 12793;12794 14700;14701 14700 2 ETLQQHK Unmodified 882.45593 0.45593014 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 5.5 0.5 1 1 30.845 30.845 3 0.025135 6406 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.76 23.601 49.358 0 68.31 45.341 46.033 39.442 46 0 65 46 46 37 1 0 1 1 1 1 14982 5557 1324 5354 12795;12796 14702;14703 14703 2 ETLVQDNIQWPTGLAVDYHNER Unmodified 2597.251 0.25102933 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 5 0 1 72.789 72.789 4 0.00026739 26681 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.5 30.484 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 1594.6 5558 175 5355 12797 14704 14704 1 ETNLESLPLVDTHSK Unmodified 1681.8523 0.85227972 1423 P20152 Vim Vimentin yes yes 0 0 0 0 4.8 0.748 2 2 1 60.976 60.976 3;4 1.0309E-05 21148 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.26 80.265 227.98 126.33 169.55 163.14 145.24 175.51 214 130 167 157 148 168 6 3 4 3 3 4 36570 5559 1423 5356 12798;12799;12800;12801;12802 14705;14706;14707;14708;14709;14710 14707 6 ETPAASEAPSSAAK Unmodified 1315.6256 0.62557424 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 5 3.27 2 2 1 1 1 1 1 39.145 39.145 2;3 6.3663E-11 11597 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.55 77.41 533.13 378.65 492.75 505.79 795.76 624.39 500 375 482 487 794 598 7 6 8 7 8 9 794750 5560 2769 5357 12803;12804;12805;12806;12807;12808;12809;12810;12811 14711;14712;14713;14714;14715;14716;14717;14718;14719;14720;14721;14722;14723 14712 13 ETPANLAK Unmodified 842.44978 0.44978213 3329 Q9WUA2;A0A087WPV4 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 5 0 1 44.141 44.141 2 0.032483 13115 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.856 23.789 0 59.584 0 48.737 81.95 76.546 0 56 0 46 83 74 0 1 0 1 1 1 3040.5 5561 3329 5358 12812 14724 14724 1 ETPEHPLK Unmodified 949.4869 0.48689592 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 4 0 1 36.094 36.094 3 0.033442 9670 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.561 25.133 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2724.2 5562 2701 5359 12813 14725 14725 1 ETPFELIEALLK Unmodified 1401.7755 0.77553294 16 A0A087WPL5;E9QNN1;O70133;Q3UR42 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 8 0 1 109.79 109.79 3 0.00048645 36964 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.262 34.2 5.365 0 0 0 5.23 0 5 0 0 0 5 0 1 0 0 0 1 0 459.19 5563 16 5360 12814 14726 14726 1 ETPGADTQVR Unmodified 1072.5149 0.51490158 472 A2AIS0;A2AIR9;A2AIR7;O55017 Cacna1b Voltage-dependent N-type calcium channel subunit alpha-1B yes no 0 0 0 0 2 0 1 32.241 32.241 2 0.030526 8147 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.916 29.429 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 1101.6 5564 472 5361 12815 14727 14727 1 ETPGSQPSEPCSGVSR Unmodified 1673.7315 0.73151265 1464 P27546 Map4 Microtubule-associated protein 4 yes yes 0 0 0 0 2 0 1 35.842 35.842 3 0.007174 9864 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.072 29.906 0 0 49.772 0 83.495 96.755 0 0 46 0 83 93 0 0 1 0 1 1 2709.7 5565 1464 5362 12816 14728 14728 1 ETPPDALILESPFTNIR Unmodified 1911.9942 0.99419293 2865 Q99LR1;D6RFU2;F7BHM8 Abhd12 Monoacylglycerol lipase ABHD12 yes no 0 0 0 0 5 0 1 84.383 84.383 3 0.045555 32129 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.115 14.371 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 2240.1 5566 2865 5363 12817 14729 14729 1 ETPQEIASK Unmodified 1001.5029 0.50293991 2176 Q64442 Sord Sorbitol dehydrogenase yes yes 0 0 0 0 4 0 1 45.453 45.453 2 0.0084265 14101 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.379 38.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3106.7 5567 2176 5364 12818 14730 14730 1 ETQALVLAPTR Unmodified 1197.6717 0.67173657 1345 P10630;Q8BTU6;A0A338P6X5 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 6 0.816 1 1 1 53.599 53.599 2 0.0023129 17664 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.871 48.729 88.24 56.373 127.8 202.86 141.23 123.89 83 56 130 195 148 120 2 1 3 3 3 3 17870 5568 1345 5365 12819;12820;12821 14731;14732;14733 14731 3 ETQAQYQALER Unmodified 1335.6419 0.64189301 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6 4.06 1 2 1 41.82 41.82 2;3 2.3745E-05 12133 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.43 70.538 20.121 18.373 117.23 37.503 118.02 106.68 19 19 111 37 120 102 1 1 3 1 3 2 23243 5569 2255 5366 12822;12823;12824;12825 14734;14735;14736;14737 14737 4 ETQFHHR Unmodified 953.44676 0.44676244 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 4 0 1 18.835 18.835 3 0.063342 2663 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.767 27.803 9.5317 8.7044 13.689 19.951 0 14.924 9 9 14 19 0 14 1 1 1 1 0 1 631.15 5570 553 5367 12826 14738 14738 1 ETQPGEAYVIQK Unmodified 1361.6827 0.68269519 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4.5 0.5 1 1 53.292 53.292 3 3.5921E-05 17865 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.013 48.424 128.22 104.49 44.51 97.971 100.62 214.59 120 102 46 93 102 204 3 2 1 2 2 4 12999 5571 1382 5368 12827;12828 14739;14740;14741;14742 14739 4 ETQSQYQALEK Unmodified 1323.6307 0.63065962 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6 Ppp1r9a yes no 0 0 0 0 4.5 0.5 1 1 47.287 47.287 3 0.0033072 14680 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.792 33.805 59.817 0 45.618 86.485 80.545 66.992 56 0 46 83 83 65 1 0 1 1 1 1 3080 5572 1119 5369 12829;12830 14743;14744 14744 2 ETQTDSVSR Unmodified 1021.4676 0.46761704 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 0 2.67 1.7 1 1 1 27.423 27.423 2;3 2.3064E-06 4617 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 159.34 70.517 20.149 24.999 108.82 95.935 27.43 72.771 19 24 106 92 28 69 1 1 3 2 1 2 35514 5573 3131 5370 12831;12832;12833 14745;14746;14747 14745 3 ETSAPSVQEPTLTETEPQTK Unmodified 2172.0434 0.043387542 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 4.67 3.77 1 3 1 1 55.057 55.057 3;4;5 9.4901E-31 18504 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 142.86 111.62 198.39 167.57 166.31 254.21 116.19 146.16 186 167 166 242 120 139 5 4 4 5 3 4 106730 5574 1424 5371 12834;12835;12836;12837;12838;12839 14748;14749;14750;14751;14752;14753;14754 14748 7 ETSATGPDSR Unmodified 1019.452 0.45196697 506 A2AQE2;Q6A098 Secisbp2l Selenocysteine insertion sequence-binding protein 2-like yes no 0 0 0 0 1 0 1 23.981 23.981 2 0.0022632 4155 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.67 35.967 9.657 0 0 5.2 14.089 9.192 9 0 0 5 14 9 1 0 0 1 1 1 729.24 5575 506 5372 12840 14755 14755 1 ETSGNLEQLLLAVVK Unmodified 1612.9036 0.903587 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 7.5 0.5 1 1 96.095 96.095 3 0.00094117 34655 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.514 41.312 40.463 27.962 28.517 0 60.44 67.565 38 28 28 0 60 65 2 1 1 0 2 2 6198.4 5576 1577 5373 12841;12842 14756;14757 14757 2 ETSKEPAEGGDGSHR Unmodified 1555.6863 0.68627702 2300 Q80TB8;D3Z434 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes no 0 0 0 1 8 5 1 1 25.393 25.393 4 3.6494E-05 5420 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.01 57.504 0 48.347 35.683 75.535 171.21 0 0 46 37 74 167 0 0 2 1 2 2 0 6581.7 5577 2300 5374 12843;12844 14758;14759 14758 2 ETSLDISSK Unmodified 978.48696 0.4869555 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 6 0 1 51.003 51.003 2 0.010082 15796 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.294 26.498 19.859 0 88.82 44.168 43.421 77.645 19 0 84 46 46 74 1 0 1 1 1 1 4070.7 5578 510 5375 12845 14760 14760 1 ETSLDTK Unmodified 792.38651 0.38651317 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 9.5 3.5 1 1 40.154 40.154 2 0.027593 11353 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.253 22.126 301.65 303.87 260.95 279.78 278.52 341.7 284 305 269 275 288 328 2 1 1 2 1 1 38498 5579 1304 5376 12846;12847 14761;14762 14762 2 ETSLGLLTGYLGSVVDAIVSSTGR Unmodified 2394.2642 0.26421978 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 12 0 2 121.61 121.61 3 1.8348E-16 32226 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.378 76.123 0 6.384 4.9888 12.735 4.4705 19.06 0 6 5 12 5 18 0 1 1 2 1 2 6229.6 5580 3391 5377 12848;12849 14763;14764 14764 2 ETSLLAVPGALSPLAIPNAAAAAAAAAAGR Unmodified 2685.4814 0.48136361 2780 Q91Z31;A0A0G2JGW0 Ptbp2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 0 9.75 0.829 2 1 1 97.227 97.227 3;4 1.2557E-08 31782 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.26 45.03 0 0 23.985 9.5399 0 0 0 0 24 9 0 0 0 0 2 1 0 0 9051.8 5581 2780 5378 12850;12851;12852;12853 14765;14766;14767;14768 14767 4 ETSNLYK Unmodified 853.41815 0.41814765 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 0 5 0 1 43.224 43.224 2 0.02731 12647 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.195 37.691 138.31 67.049 141.23 99.956 165.49 133.86 130 74 139 102 167 130 1 1 1 1 1 1 12012 5582 1237 5379 12854 14769 14769 1 ETSPETSLIQDEVALK Unmodified 1758.8887 0.8887248 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 4.4 0.8 1 1 3 71.075 71.075 3;4 2.6912E-08 26376 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.31 75.305 108.99 198.04 188.87 217.59 210.81 162.92 103 196 195 213 213 158 4 5 5 5 4 3 53106 5583 1424 5380 12855;12856;12857;12858;12859 14770;14771;14772;14773;14774;14775 14770 6 ETSSEYQK Unmodified 970.42436 0.42435524 2738 Q91VF2 Hnmt Histamine N-methyltransferase yes yes 0 0 0 0 3.5 0.5 1 1 35.081 35.081 2;3 0.0057469 9199 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.95 68.921 0 29.329 27.717 18.403 90.082 32.622 0 28 28 19 88 32 0 1 1 1 2 1 5388.1 5584 2738 5381 12860;12861 14776;14777 14777 2 ETSYGLSFFKPQPGNFER Unmodified 2103.0062 0.0061545955 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 1 8 0 1 69.285 69.285 3 0.012031 23015 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.068 25.946 0 59.584 0 61.208 0 69.29 0 56 0 56 0 65 0 1 0 1 0 1 5580.2 5585 2379 5382 12862 14778 14778 1 ETTDTDTADQVIASFK Unmodified 1740.8054 0.8053891 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 4 0 1 73.361 73.361 3 1.9517E-17 26870 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.47 111.87 0 0 32.278 52.665 61.387 0 0 0 32 51 61 0 0 0 1 1 1 0 11597 5586 310 5383 12863 14779 14779 1 ETTEESVK Unmodified 921.42911 0.42910627 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 5 4.05 1 2 1 1 36.094 36.094 2;3 0.0014034 10240 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 133.12 61.424 463.41 336.14 277.02 359.44 627.42 397.11 435 344 287 353 624 383 5 4 3 4 4 3 60837 5587 3307 5384 12864;12865;12866;12867;12868 14780;14781;14782;14783;14784 14782 5 ETTEESVKETER Unmodified 1436.6631 0.66308196 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 1 4.75 4.82 1 1 1 1 34.908 34.908 3 2.4377E-14 8966 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.18 88.521 454.42 246.16 808.86 670.25 852.91 766.34 426 237 786 672 870 739 3 1 3 4 4 3 75245 5588 3307 5385 12869;12870;12871;12872 14785;14786;14787;14788 14785 4 ETTENIR Unmodified 861.41921 0.41921028 995 F6SQH7;Q91VA6 Poldip2 Polymerase delta-interacting protein 2 yes no 0 0 0 0 2 0 1 29.182 29.182 2 0.027192 6679 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.523 46.12 0 0 43.361 46.755 49.893 38.018 0 0 42 46 51 37 0 0 1 1 1 1 6273.8 5589 995 5386 12873 14789 14789 1 ETTFLEITDNHDR Unmodified 1589.7322 0.73216458 3083 Q9D7X1 Kctd4 BTB/POZ domain-containing protein KCTD4 yes yes 0 0 0 0 4 0 1 56.153 56.153 3 9.3089E-05 19203 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.307 68.071 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 6774.6 5590 3083 5387 12874 14790 14790 1 ETTGTGPNVYHENDTIAK Unmodified 1945.9017 0.9017491 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 3.5 0.5 1 1 45.206 45.206 3 5.8853E-39 13894 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.24 102.1 29.807 46.934 0 30.104 26.577 38.684 28 46 0 28 28 37 1 1 0 1 1 1 4841 5591 2485 5388 12875;12876 14791;14792 14792 2 ETTQVVQEAEPESGAQPR Unmodified 1954.9232 0.92321283 37 S4R294;S4R2J9;A0A0A0MQ79;Q3TLH4 Prrc2c Protein PRRC2C yes no 0 0 0 0 1 0 1 45.03 45.03 3 3.271E-07 13086 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.087 68.207 0 9.576 0 0 9.414 0 0 9 0 0 9 0 0 1 0 0 1 0 2153.8 5592 37 5389 12877 14793 14793 1 ETTVLVAQNGNIK Deamidation (N) 1386.7355 0.73545904 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;Q8BS97;E0CZC0 Vcan Versican core protein yes no 0 1 0 0 4.5 0.5 1 1 57.316 57.316 2;3 9.3468E-14 19447 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.66 79.099 79.223 0 30.145 0 86.867 29.041 74 0 28 0 84 28 2 0 1 0 2 1 8106.7 5593 851 5390 12878;12879 14794;14795 14795 224;225 2 ETTVTHQEAHDSSR Unmodified 1596.7128 0.71282612 81 A0A0G2JFE1;A0A0G2JEE6;A0A0G2JE46;A0A0G2JFF9;A0A0G2JDP0;O35387 Hax1 HCLS1-associated protein X-1 yes no 0 0 0 0 1.5 0.5 1 1 20.96 20.96 4 0.00086652 3205 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.901 48.109 39.006 7.5527 0 0 0 9.594 37 9 0 0 0 9 2 1 0 0 0 1 1664.1 5594 81 5391 12880;12881 14796;14797 14796 2 ETTVVWDK Unmodified 976.48656 0.48656157 583 B1ASZ3;Q64516;Q9WU65 Gyk;Gk;Gk2 Glycerol kinase;Glycerol kinase 2 yes no 0 0 0 0 5 0 1 56.645 56.645 3 0.027884 19141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.968 29.813 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5595 583 5392 12882 14798 14798 1 ETVAAPGR Unmodified 799.41882 0.41881635 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.5 4.5 1 1 31.316 31.316 2 0.011407 7145 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.561 55.4 78.856 71.85 93.825 46.968 58.576 0 74 74 93 46 56 0 1 2 2 1 1 0 32886 5596 2295 5393 12883;12884 14799;14800 14800 2 ETVDQVEELR Unmodified 1216.5935 0.59354583 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 1.5 0.5 1 1 51.133 51.133 2;3 0.0012561 16702 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.848 47.993 20.244 57.764 27.245 28.98 46.477 77.558 19 56 28 28 46 74 1 2 1 1 1 2 6921.1 5597 3204 5394 12885;12886 14801;14802 14802 2 ETVDQVEELRR Unmodified 1372.6947 0.69465686 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 3 0 1 44.332 44.332 3 8.3813E-08 13978 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.72 69.948 49.128 45.631 0 48.356 102.19 66.374 46 46 0 46 102 65 1 1 0 1 1 1 7613.9 5598 3204 5395 12887 14803 14803 1 ETVDSFLDLLR Unmodified 1306.6769 0.67688153 1213 O35874;Q5SSP3 Slc1a4 Neutral amino acid transporter A;Amino acid transporter yes no 0 0 0 0 7.5 0.5 1 1 90.853 90.853 2 0.00046901 33642 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.297 53.945 20.292 18.848 39.726 6.9245 28.97 0 19 19 37 9 28 0 1 1 1 1 1 0 4485.1 5599 1213 5396 12888;12889 14804;14805 14804 2 ETVGDLEAMNEMNDELQENAR Unmodified 2407.0268 0.026767975 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 2 0 1 72.086 72.086 3 1.1041E-66 26147 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 142.97 128.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5600 895 5397 12890 14806 14806 1 ETVIVEGQTEEIR Unmodified 1501.7624 0.76240208 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 1.5 0.5 1 1 52.384 52.384 2;3 6.3181E-28 17290 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 178.95 125.2 0 15.645 18.861 26.871 22.492 62.252 0 15 19 26 23 59 0 1 1 2 1 2 11359 5601 1415 5398 12891;12892 14807;14808 14808 2 ETVKPVEVEEGESVVLPCNPPPSAAPLR Unmodified 2999.5274 0.52738711 456 A2AFG7;A2AFG8;Q6PGJ3 L1cam yes no 0 0 0 1 4 0 1 67.067 67.067 4 5.908E-05 24158 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.164 33.834 0 9.576 0 9.2942 28.861 0 0 9 0 9 28 0 0 1 0 1 1 0 3368.4 5602 456 5399 12893 14809 14809 1 ETVLQQK Unmodified 844.46543 0.46543219 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 6.67 0.471 1 2 44.576 44.576 2;3 0.0065981 12864 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.377 30.974 0 138.32 0 50.278 67.99 78.884 0 130 0 46 65 74 0 3 0 1 1 2 8868.2 5603 2160 5400 12894;12895;12896 14810;14811;14812 14810 3 ETVLSSWMAK Unmodified 1150.5692 0.56924534 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 9.5 0.5 1 1 72.427 72.427 3 0.001271 21695 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.643 49.267 0 48.944 40.034 0 0 148.17 0 46 37 0 0 139 0 1 1 0 0 2 11623 5604 2301;365 5401 12897;12898 14813;14814 14814 2 ETVNETGFQLK Unmodified 1264.6299 0.62993134 2771 Q91YJ2;A0A338P7D2 Snx4 Sorting nexin-4 yes no 0 0 0 0 5 0 1 59.059 59.059 3 0.005898 20167 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.693 28.842 0 19.566 38.86 0 46.111 58.38 0 19 37 0 46 56 0 1 1 0 1 1 12720 5605 2771 5402 12899 14815 14815 1 ETVQTTEDQILK Unmodified 1403.7144 0.71438925 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 3.5 0.5 1 1 57.41 57.41 3 0.0002009 20050 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.496 48.891 39.701 0 0 0 0 39.442 37 0 0 0 0 37 1 0 0 0 0 1 3393.2 5606 2182 5403 12900;12901 14816;14817 14816 2 ETVSEESNVLCLSK Unmodified 1593.7556 0.75560214 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 5 0.816 1 1 1 62.925 62.925 3 9.4888E-22 22142 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.68 99.728 89.669 189.39 83.953 50.502 140.19 124.99 84 185 83 47 139 121 2 3 1 2 2 2 17872 5607 1652 5404 12902;12903;12904 14818;14819;14820;14821 14820 4 ETVTQRPGATVPTDFATFPSSAFLR Unmodified 2695.3606 0.36057978 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 1 7 0 1 73.717 73.717 4 0.003058 25588 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.406 27.863 39.264 16.575 59.4 0 0 29.848 37 19 56 0 0 28 1 1 1 0 0 1 5425.5 5608 895 5405 12905 14822 14822 1 ETVTVLPGASFFSSDESFAMIR Unmodified 2390.1464 0.14641283 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 8.5 2.69 1 1 1 1 92.036 92.036 3 4.9324E-16 34103 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.48 79.174 59.788 75.348 19.881 54.558 45.964 92.496 56 74 19 51 46 88 3 3 1 2 2 3 18586 5609 3028 5406 12906;12907;12908;12909 14823;14824;14825;14826;14827 14824 5 ETVVEVPQVTWEDIGGLEDVK Unmodified 2341.1689 0.16892241 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 5.5 0.5 1 1 88.913 88.913 3 7.8131E-06 33951 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.844 38.765 20.292 18.848 0 0 19 0 19 19 0 0 19 0 1 1 0 0 1 0 2511.6 5610 1875 5407 12910;12911 14828;14829 14828 2 ETVVEVPQVTWEDIGGLEDVKR Unmodified 2497.27 0.27003344 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 6.12 2.71 2 2 3 1 81.142 81.142 3;4;5 7.0254E-15 30061 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.226 66.298 39.295 272.34 162.58 167.54 131.79 146.66 37 261 168 158 130 141 2 8 6 3 5 6 61050 5611 1875 5408 12912;12913;12914;12915;12916;12917;12918;12919 14830;14831;14832;14833;14834;14835;14836;14837;14838 14837 9 ETVVTSTTEPSR Unmodified 1305.6412 0.64122431 1166 O08795 Prkcsh Glucosidase 2 subunit beta yes yes 0 0 0 0 3.5 0.5 1 1 38.552 38.552 2 2.7937E-13 11362 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 132.44 94.88 29.87 0 29.298 19.021 0 58.442 28 0 28 19 0 56 1 0 1 1 0 2 7506.7 5612 1166 5409 12920;12921 14839;14840 14839 2 ETWLSENQR Unmodified 1161.5415 0.54145068 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 7 3.54 1 1 1 1 48.279 48.279 2 3.5038E-05 15170 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.21 98.397 425.08 73.19 450.67 205.16 164.1 334.31 399 74 431 204 167 318 4 1 4 3 2 3 84532 5613 2186;2148 5410 12922;12923;12924;12925 14841;14842;14843;14844 14844 4 ETWYLSWALDTNQEER Unmodified 2039.9225 0.92248455 2627 Q8R050;Q149F3 Gspt1;Gspt2 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A;Eukaryotic peptide chain release factor GTP-binding subunit ERF3B yes no 0 0 0 0 13 0 1 83.644 83.644 3 0.060056 32633 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 30.107 1.4746 29.635 27.027 45.848 48.325 16.645 29.373 28 28 46 47 19 28 1 1 1 1 1 1 4577.7 5614 2627 5411 12926 14845 14845 1 ETYGDMADCCEK Oxidation (M) 1493.5109 0.51088012 656 CON__P02769 yes yes 0 0 1 0 2 0 1 40.139 40.139 3 3.2066E-08 11944 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 112.94 98.376 15.252 30.014 116.16 46.321 16.628 32.572 15 31 111 49 19 31 1 1 1 1 1 1 8138.1 + 5615 656 5412 12927 14846 14846 33 1 ETYGDTEAICR Unmodified 1313.5558 0.55578012 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 2.5 0.5 1 1 42.405 42.405 2 1.4135E-07 13131 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.47 84.852 49.936 7.4132 76.88 55.931 36.924 28.794 47 9 74 56 37 28 2 1 2 2 1 1 7023.2 5616 1042 5413 12928;12929 14847;14848 14848 2 ETYNSLAAWLTDAR Unmodified 1609.7736 0.77363546 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B yes yes 0 0 0 0 7 0 1 81.621 81.621 3 9.4195E-05 29389 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.909 66.07 0 0 0 0 38.044 19.168 0 0 0 0 37 19 0 0 0 0 1 1 1935.3 5617 2785 5414 12930 14849 14849 1 ETYPAYLPLYVAR Unmodified 1554.8082 0.80823006 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 74.704 74.704 2 0.010797 25525 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.584 7.4295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5618 2178 5415 12931 14850 14850 1 EVAAFAQFGSDLDAATQQLLSR Unmodified 2337.1601 0.16008906 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7.24 3.17 2 1 4 3 2 1 1 1 1 1 98.791 98.791 3;4 8.3881E-67 36943 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 165.53 140.21 278.44 132.78 161.91 215.58 168.15 178.74 262 134 158 205 167 170 13 9 13 15 10 13 307150 5619 1881 5416 12932;12933;12934;12935;12936;12937;12938;12939;12940;12941;12942;12943;12944;12945;12946;12947;12948 14851;14852;14853;14854;14855;14856;14857;14858;14859;14860;14861;14862;14863;14864;14865;14866;14867;14868;14869;14870;14871;14872;14873;14874;14875;14876;14877 14855 27 EVAAPDVGR Unmodified 912.46649 0.46649483 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 4 0.816 1 1 1 40.827 40.827 2 0.0020043 12360 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.948 59.22 108.93 61.236 34.622 108.6 43.673 97.892 102 65 37 102 46 93 2 2 1 2 1 2 21509 5620 2059 5417 12949;12950;12951 14878;14879;14880 14878 3 EVAEADSVR Unmodified 974.46689 0.46688876 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1.5 0.5 1 1 35.274 35.274 2 5.6085E-06 9087 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 156.01 71.638 216.49 238.46 201.09 176.77 247.94 249.83 204 241 204 176 253 241 2 2 1 1 2 2 63371 5621 3266 5418 12952;12953 14881;14882 14881 2 EVAENCK Unmodified 848.36982 0.36981725 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 9 4 1 1 33.585 33.585 2 0.018598 8318 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.01 49.372 127.68 138.21 64.535 148.08 0 178.02 120 139 74 139 0 167 1 1 1 1 0 1 9794.8 5622 307 5419 12954;12955 14883;14884 14884 2 EVAEQGK Unmodified 759.37628 0.37628284 407 A0A338P6E5;A0A338P6I6;Q62108 Dlg4 Disks large homolog 4 yes no 0 0 0 0 4 0 2 34.086 34.086 2 0.027192 8591 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.523 35.806 39.317 178.36 55.654 130.66 140.91 77.666 37 171 60 125 143 74 1 2 1 2 2 1 10121 5623 407 5420 12956;12957 14885;14886 14885 2 EVAEQSSESVQTAR Unmodified 1519.7114 0.71142914 2549 Q8CHU3;F7CD65 Epn2 Epsin-2 yes no 0 0 0 0 1.5 0.5 1 1 35.636 35.636 3 8.7268E-05 9298 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.228 67.686 39.504 37.459 18.471 19.151 27.41 49.32 37 38 19 19 28 47 1 2 1 1 1 2 10043 5624 2549 5421 12958;12959 14887;14888 14887 2 EVAFFNNFLTDAK Unmodified 1514.7405 0.74054442 2877 Q99MR6;A0A0G2JDF8;A0A0G2JG65 Srrt Serrate RNA effector molecule homolog yes no 0 0 0 0 9 0 1 85.712 85.712 3 0.0096791 29931 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.666 35.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5625 2877 5422 12960 14889 14889 1 EVAGDTIIFR Unmodified 1119.5924 0.59242362 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0.816 1 1 1 61.757 61.757 2 0.0017318 21490 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.047 38.921 204.42 125.01 133.78 106.54 83.627 0 195 129 130 102 83 0 3 3 2 2 1 0 39368 5626 20;2354 5423 12961;12962;12963 14890;14891;14892;14893 14891 4 EVAMDDHK Unmodified 943.40693 0.40693104 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 6.67 4.5 1 1 1 36.762 36.762 3 0.0027545 9638 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.136 31.154 157.05 46.618 255.05 47.617 208.54 201.92 148 47 241 46 206 195 2 1 2 1 1 1 26193 5627 2253 5424 12964;12965;12966 14894;14895;14896 14896 3 EVAMTEHK Oxidation (M) 959.43823 0.43823117 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 1 0 4 0 1 29.693 29.693 3 0.015562 6847 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.379 27.03 0 0 0 150.05 99.799 0 0 0 0 139 102 0 0 0 0 1 1 0 7823.6 5628 106 5425 12967 14897 14897 7 1 EVAMTEHK Unmodified 943.44332 0.44331654 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7 3.54 1 1 1 1 36.544 36.544 2;3 0.002963 9449 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.213 37.015 88.59 336.63 80.068 247.75 280.94 0 83 322 74 227 269 0 1 3 1 2 3 0 149970 5629 106 5425 12968;12969;12970;12971 14898;14899;14900;14901 14901 4 EVAQTADAR Unmodified 959.46722 0.46722311 420 A2A4A6;Q62077 Plcg1 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 yes no 0 0 0 0 3 0 1 28.817 28.817 2 0.00088588 6828 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.342 35.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5630 420 5426 12972 14902 14902 1 EVASETWK Unmodified 948.45526 0.45526144 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 5.5 0.5 1 1 50.689 50.689 2 0.019545 16237 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.516 23.967 0 77.306 85.555 44.337 44.769 77.607 0 74 83 46 46 74 0 2 1 1 1 2 163640 5631 1180 5427 12973;12974 14903;14904 14903 2 EVASGAAR Unmodified 759.38752 0.38751622 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3;Q91YZ2;P56546;E9PWQ9 Ctbp1;Ctbp2 C-terminal-binding protein 1;C-terminal-binding protein 2 yes no 0 0 0 0 3 0 1 24.332 24.332 2 0.0063253 4739 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.36 35.72 0 0 77.2 64.39 109.19 115.21 0 0 74 65 111 111 0 0 1 1 1 1 23581 5632 114 5428 12975 14905 14905 1 EVATDVR Unmodified 788.40283 0.40283194 2566 Q8JZN2;Q91W50;A0A0G2JF72;A0A0G2JE62;A0A0G2JDJ7 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 2.5 0.5 1 1 33.411 33.411 2 0.027218 8613 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.191 29.852 148.8 68.702 0 119.47 98.547 77.38 139 74 0 111 102 74 1 1 0 2 2 1 15776 5633 2566 5429 12976;12977 14906;14907 14906 2 EVAVGDSEGR Unmodified 1017.4727 0.47270242 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 4.75 4.82 1 1 1 1 34.987 34.987 2 1.8081E-11 9526 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 166.07 96.444 490.72 185.48 574.36 330.21 424.2 448.41 461 208 557 331 431 432 3 2 4 2 3 3 81115 5634 743 5430 12978;12979;12980;12981 14908;14909;14910;14911 14909 4 EVCEEAGVK Unmodified 1019.4594 0.45936054 1132 I1E4X7;Q9JI46;H3BLR8;B2KF67;A0A338P6T6;A0A338P6L9 Nudt3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes no 0 0 0 0 3.5 0.5 1 1 42.582 42.582 2 3.2858E-07 13205 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.41 68.813 0 53.232 61.726 0 51.346 58.231 0 51 60 0 51 56 0 1 1 0 1 1 5761.5 5635 1132 5431 12982;12983 14912;14913 14912 2 EVCFACVDGK Unmodified 1183.5002 0.5001795 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6 0.816 1 1 1 58.545 58.545 2;3 5.8628E-07 20092 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.68 90.367 176.81 185.71 190.42 191.57 154.54 172.55 166 185 195 185 158 166 2 2 3 2 2 2 57958 5636 2185 5432 12984;12985;12986 14914;14915;14916 14914 3 EVCFIDIACDEIPER Unmodified 1864.8335 0.83353488 2616 Q8K4R4;A0A0A0MQ88;X1WI19 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 0 4 0 1 77.54 77.54 3 0.00010668 28953 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.431 55.347 0 9.576 0 0 8.727 20.005 0 9 0 0 9 19 0 1 0 0 1 1 2278 5637 2616 5433 12987 14917 14917 1 EVCFTIENK Unmodified 1138.5329 0.53285983 2276 Q78PY7;Q3TJ56;E9Q3E9 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 6 0 1 60.8 60.8 3 0.0042442 20459 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.305 37.976 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5638 2276 5434 12988 14918 14918 1 EVCGEQHR Unmodified 1013.4349 0.43487712 321 A2AB60;A0A1W2P6X3;Q9JL26 Fmnl1 Formin-like protein 1 yes no 0 0 0 0 2 0 1 19.517 19.517 3 0.002257 3048 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.162 76.199 0 9.3321 14.588 0 19.874 0 0 9 14 0 19 0 0 1 1 0 1 0 923.48 5639 321 5435 12989 14919 14919 1 EVCQLLPFLVR Unmodified 1372.7537 0.75369207 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10.7 1.7 1 1 1 85.884 85.884 2;3 6.6553E-08 27612 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.52 68.624 117.49 37.717 47 30.101 26.76 33.348 116 37 47 28 28 32 2 1 2 1 1 1 72427 5640 3355 5436 12990;12991;12992 14920;14921;14922;14923 14922 4 EVDDFFEHER Unmodified 1321.5575 0.55749468 2348 Q80ZJ7 Snx32 Sorting nexin-32 yes yes 0 0 0 0 2 0 1 54.97 54.97 3 0.032908 18416 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.243 27.985 20.346 8.2041 0 20.767 0 0 19 9 0 19 0 0 1 1 0 1 0 0 1203.7 5641 2348 5437 12993 14924 14924 1 EVDDLEQWIAER Unmodified 1501.7049 0.7048872 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6 3.58 1 1 2 1 78.754 78.754 2;3 5.5124E-13 29793 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 124.6 97.94 71.065 69.885 136.07 35.412 79.193 87.286 67 72 131 37 80 83 3 4 4 2 4 3 62878 5642 2148 5438 12994;12995;12996;12997;12998 14925;14926;14927;14928;14929;14930 14925 6 EVDDLGPEVGDIK Unmodified 1384.6722 0.67219008 1185 O35286;A0A0G2JG10;Q497W9;A0A0G2JGQ5 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 3.5 0.5 1 1 65.131 65.131 3 0.00013013 23180 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.881 50.205 0 0 0 20.767 47.137 48.757 0 0 0 19 46 47 0 0 0 1 1 2 8056.8 5643 1185 5439 12999;13000 14931;14932 14932 2 EVDEEDAALYR Unmodified 1308.5834 0.58337508 1926 Q3TIR3;A0A1B0GSI8 Ric8a Synembryn-A yes no 0 0 0 0 1 0 1 49.947 49.947 2 1.6169E-07 14854 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.93 74.208 0 29.263 31.616 28.114 32.181 0 0 28 32 28 32 0 0 1 1 1 1 0 11927 5644 1926 5440 13001 14933 14933 1 EVDEKPASTPWGSK Unmodified 1529.7362 0.73618733 3303 Q9R0Q6;A0A0G2JF52 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 1 7.75 3.11 1 1 1 1 52.402 52.402 3 0.00010665 17261 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.632 57.27 365.11 158.4 555.4 369.32 428 475.23 343 162 539 362 441 453 3 2 4 3 4 3 67674 5645 3303 5441 13002;13003;13004;13005 14934;14935;14936;14937 14934 4 EVDEQMLAIQSK Oxidation (M) 1405.6759 0.67589525 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 1 0 4 0 1 54.312 54.312 3 0.00041153 18341 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.469 58.837 29.856 37.355 0 61.208 0 78.884 28 37 0 56 0 74 1 1 0 1 0 1 6050.4 5646 3183 5442 13006 14938 14938 197 1 EVDEQMLAIQSK Unmodified 1389.681 0.68098063 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 0 0 7.83 3.72 1 1 2 2 62.62 62.62 2;3 1.3808E-22 21382 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 165.58 103.31 572.05 258.43 297.5 456.83 528.94 520.04 536 269 301 439 539 502 8 4 5 7 7 8 209680 5647 3183 5442 13007;13008;13009;13010;13011;13012 14939;14940;14941;14942;14943;14944;14945;14946;14947 14945 9 EVDEQMLNVQNK Oxidation (M) 1461.677 0.67695789 1795;2283;1863;2975 P99024;P68372;Q7TMM9;Q9CWF2 Tubb5;Tubb4b;Tubb2a;Tubb2b Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 1 0 5 2.72 1 6 2 1 53.1 53.1 3;4 6.491E-08 16070 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.72 84.786 754.55 538.66 1036 724.75 1145.3 1279.4 707 547 1013 705 1154 1229 10 8 10 8 9 12 102150 5648 1863;1795;2283;2975 5443 13013;13014;13015;13016;13017;13018;13019;13020;13021;13022 14948;14949;14950;14951;14952;14953;14954;14955;14956;14957;14958;14959;14960;14961;14962;14963 14950 147 16 EVDEQMLNVQNK Unmodified 1445.682 0.68204326 1795;2283;1863;2975 P99024;P68372;Q7TMM9;Q9CWF2 Tubb5;Tubb4b;Tubb2a;Tubb2b Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 5.56 2.79 1 3 2 2 1 57.773 57.773 2;3;4 6.4435E-33 19962 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 187.42 146.39 1033 1088.9 1464.8 1287.8 1433 1655.1 970 1103 1466 1280 1461 1591 6 10 10 11 8 12 1118400 5649 1863;1795;2283;2975 5443 13023;13024;13025;13026;13027;13028;13029;13030;13031 14964;14965;14966;14967;14968;14969;14970;14971;14972;14973;14974;14975 14966 12 EVDEQMLNVQNK Deamidation (N) 1446.6661 0.66605885 1795;2283;1863;2975 P99024;P68372;Q7TMM9;Q9CWF2 Tubb5;Tubb4b;Tubb2a;Tubb2b Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 0 3.4 0.49 3 2 59.458 59.458 2;3 4.704E-05 21126 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.094 62.571 196.76 222 285.21 69.555 56.449 236.11 185 224 278 74 56 223 5 5 5 3 1 5 27435 5650 1863;1795;2283;2975 5443 13032;13033;13034;13035;13036 14976;14977;14978;14979;14980;14981 14978 718;719 6 EVDEQMLNVQNK Oxidation (M);Deamidation (N) 1462.661 0.66097347 1795;2283;1863;2975 P99024;P68372;Q7TMM9;Q9CWF2 Tubb5;Tubb4b;Tubb2a;Tubb2b Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 1 0 5 0 1 56.771 56.771 3 0.0002402 19055 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.848 51.975 88.208 114.8 87.192 164.07 182.04 114.44 83 111 83 158 185 111 2 2 1 3 3 2 9083.4 5651 1863;1795;2283;2975 5443 13037 14982;14983;14984 14982 718;719 147 3 EVDEQMLSVQSK Oxidation (M) 1407.6552 0.65515981 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 1 0 3 0 1 50.206 50.206 3 0.014451 16838 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.563 18.5 0 38.838 31.723 12.808 32.073 23.603 0 37 32 14 32 23 0 1 1 1 1 1 3868.2 5652 3072 5444 13038 14985 14985 191 1 EVDEQMLSVQSK Unmodified 1391.6602 0.66024519 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 0 0 5.75 2.9 1 2 2 2 1 58.249 58.249 2;3;4 4.4497E-66 20007 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.08 161.21 325.41 328.45 326.06 328.21 471.15 278.75 306 334 324 325 474 269 4 6 4 5 6 3 109700 5653 3072 5444 13039;13040;13041;13042;13043;13044;13045;13046 14986;14987;14988;14989;14990;14991;14992;14993 14993 8 EVDGLDVSK Unmodified 960.47639 0.47639081 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5 0 1 54.821 54.821 2 0.00098482 18249 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.43 28.204 68.987 72.988 65.603 0 0 69.29 65 74 65 0 0 65 1 1 1 0 0 1 4593.7 5654 3204 5445 13047 14994 14994 1 EVDIGIPDATGR Unmodified 1241.6252 0.62518031 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 4.4 1.02 1 2 1 1 60.84 60.84 2;3 2.6005E-20 21126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.57 104.17 468.76 413.08 104.02 80.667 527.47 126.83 440 419 106 79 511 121 4 3 2 1 2 2 73950 5655 1875 5446 13048;13049;13050;13051;13052 14995;14996;14997;14998;14999 14998 5 EVDIYTVK Unmodified 965.50696 0.50696266 244;2231 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7;Q6PAK3 Prmt1;Prmt8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 no no 0 0 0 0 5.5 0.5 1 1 59.145 59.145 2 0.0067174 20397 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.709 20.184 69.57 34.677 0 89.695 54.456 0 65 37 0 83 56 0 1 1 0 1 1 0 6756.2 5656 244;2231 5447 13053;13054 15000;15001 15000 2 EVDPDGRR Unmodified 942.45191 0.45190739 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 2 0.816 1 1 1 23.758 23.758 3 0.0062139 4514 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.37 59.141 457.64 131.76 338.26 289.98 450.45 354.16 429 139 334 287 455 343 3 2 3 2 3 2 75783 5657 815;2590 5448 13055;13056;13057 15002;15003;15004 15004 3 EVDPQGLR Unmodified 912.46649 0.46649483 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 0 4 0 1 41.593 41.593 2 0.0111 12300 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.806 40.75 63.696 63.849 60.768 0 0 103.4 60 65 60 0 0 97 1 1 1 0 0 1 17868 5658 960;1082 5449 13058 15005 15005 1 EVDPQGQR Unmodified 927.44101 0.44100836 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 4.6 4.32 1 1 1 1 1 28.401 28.401 2 2.3677E-10 6763 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 173.28 126.48 1451.4 1049.2 1515.7 1448.3 1205.7 1495.6 1366 1100 1524 1428 1253 1434 6 5 5 6 6 5 746060 5659 118;1534 5450 13059;13060;13061;13062;13063 15006;15007;15008;15009;15010;15011;15012 15010 7 EVDYEAGDIPTEWEAWIR Unmodified 2177.9906 0.99056411 2040 Q59J78;A0A286YE75 Ndufaf2 Mimitin, mitochondrial yes no 0 0 0 0 5 0 1 89.713 89.713 3 0.012417 34240 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.237 10.208 9.5607 8.7851 8.7477 9.3156 0 0 9 9 9 9 0 0 1 1 1 1 0 0 1140.7 5660 2040 5451 13064 15013 15013 1 EVEAEAESYYR Unmodified 1344.5834 0.58337508 142 A0A0R3P9D0;Q7TPB0 Lppr3 Lipid phosphate phosphatase-related protein type 3 yes no 0 0 0 0 2 0 1 50.212 50.212 2 0.00046758 16229 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.309 66.296 0 29.792 0 60 64.235 29.08 0 28 0 56 65 28 0 1 0 2 2 1 1924.7 5661 142 5452 13065 15014;15015 15014 2 EVEAPEVR Unmodified 927.46616 0.46616048 888 E9Q2V5;Q3UTZ3 BC037034 Uncharacterized protein C7orf43 homolog yes no 0 0 0 0 2 0 1 40.85 40.85 2 0.046031 12166 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.252 17.404 39.345 26.513 37.419 18.537 0 0 37 28 37 19 0 0 1 1 1 1 0 0 3977.6 5662 888 5453 13066 15016 15016 1 EVEDFQPYFK Unmodified 1300.5976 0.59756858 1953 Q3U125;Q9CYH2;D3YYG8;D3Z398;D3Z252 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 0 6 0 1 69.536 69.536 3 0.042283 24458 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.589 10.531 59.862 44.908 0 0 58.576 0 56 46 0 0 56 0 1 1 0 0 1 0 6819.1 5663 1953 5454 13067 15017 15017 1 EVEDLDQLEAEITT Unmodified 1603.7465 0.74647724 536 A2BE91;Q5U4F6 Wdr34 WD repeat-containing protein 34 yes no 0 0 0 0 2 0 1 87.866 87.866 3 0.0035724 29196 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.145 31.312 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 612.84 5664 536 5455 13068 15018 15018 1 EVEEDEYK Unmodified 1039.4346 0.43458558 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 4 4.56 2 1 1 1 43.641 43.641 2;3 0.0030214 12382 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.31 101.36 237.46 116.58 388.72 102.66 174.41 271.12 223 112 370 111 176 259 3 2 4 2 2 3 88328 5665 1324 5456 13069;13070;13071;13072;13073 15019;15020;15021;15022;15023;15024 15019 6 EVEELILTESK Unmodified 1288.6762 0.67621283 1210 O35841 Api5 Apoptosis inhibitor 5 yes yes 0 0 0 0 4 0 1 72.134 72.134 3 0.02001 26300 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.299 18.181 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3075.7 5666 1210 5457 13074 15025 15025 1 EVEETDEMDQVELVDFDPNQER Oxidation (M) 2681.1287 0.12865009 1765 P63037 Dnaja1 DnaJ homolog subfamily A member 1 yes yes 0 0 1 0 1 0 1 70.058 70.058 3 1.4267E-11 23741 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.773 69.316 9.629 0 4.6996 14.858 8.7315 0 9 0 5 14 9 0 1 0 1 1 1 0 3002.5 5667 1765 5458 13075 15026 15026 137 1 EVEETDEMDQVELVDFDPNQER Unmodified 2665.1337 0.13373547 1765 P63037 Dnaja1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 0 1.5 0.5 1 1 75.848 75.848 3 2.1688E-18 26086 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.75 96.386 11.748 4.6704 5.3204 11.446 22.797 9.3472 11 5 5 11 23 9 2 1 1 2 3 1 13269 5668 1765 5458 13076;13077 15027;15028;15029 15027 3 EVEGERR Unmodified 873.43044 0.43044367 782;926 D3Z6I8;E9Q7Q3 Tpm3 no no 0 0 0 1 13 0 1 19.124 19.124 3 0.014018 2883 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.352 18.295 6.3386 7.9173 10.004 6.9277 6.7541 7.2693 6 8 10 7 7 7 1 1 1 1 1 1 914.14 5669 782;926 5459 13078 15030 15030 1 EVEMGPFK Unmodified 935.44225 0.44225391 2264;2266 Q6ZQ73;Q6ZQ38 Cand2;Cand1 Cullin-associated NEDD8-dissociated protein 2;Cullin-associated NEDD8-dissociated protein 1 no no 0 0 0 0 6 0 1 60.386 60.386 2 0.046045 20270 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.246 12.076 68.929 0 137.19 70.099 138.58 104.78 65 0 130 74 139 102 1 0 1 1 1 1 4417.9 5670 2266;2264 5460 13079 15031 15031 1 EVEMSVDDEDINSSR Unmodified 1723.7207 0.72067319 2596 Q8K298 Anln Actin-binding protein anillin yes yes 0 0 0 0 1 0 1 52.966 52.966 2 0.02091 16361 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.796 37.141 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1060.3 5671 2596 5461 13080 15032 15032 1 EVENEQTPVSEPEEEKGSQPGPPVER Unmodified 2876.3312 0.33118972 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4;A0A1W2P896;A0A1W2P7H7 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 1 1 0 1 47.783 47.783 4 0.00011569 14254 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 44.304 26.777 0 0 17.312 0 19.874 0 0 0 16 0 19 0 0 0 1 0 1 0 6707.4 5672 1250 5462 13081 15033 15033 1 EVENSEDPK Unmodified 1045.4564 0.45638365 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 2 1 1 1 36.447 36.447 2 0.00098586 10446 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.711 45.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5673 2182 5463 13082;13083 15034;15035 15035 2 EVEPALELLEPIDQK Unmodified 1721.9087 0.90873196 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 4 0 1 84.122 84.122 3 0.0015974 31876 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.643 33.186 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1809.8 5674 1595 5464 13084 15036 15036 1 EVEPTSHMGVPR Unmodified 1337.6398 0.63978452 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 4 0 1 39.641 39.641 3 0.050348 11377 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.236 0.59042 87.99 101.02 94.121 0 103.39 96.188 83 102 93 0 102 93 1 1 1 0 1 1 10951 5675 2890 5465 13085 15037 15037 1 EVEQWFATQTEELNK Unmodified 1850.8687 0.86865806 649;663 CON__O76011;CON__Q8IUT8;CON__Q14525 no no 0 0 0 0 5.5 0.5 1 1 77.859 77.859 3 2.5525E-05 28466 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.428 56.29 39.387 0 0 30.604 0 49.036 38 0 0 28 0 46 2 0 0 1 0 1 9093.9 + 5676 649;663 5466 13086;13087 15038;15039 15039 2 EVESIGAHLNAYSTR Deamidation (N) 1646.79 0.79001381 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 0 4 0 1 50.847 50.847 3 1.6804E-05 16672 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.58 86.338 0 0 0 0 37.714 28.772 0 0 0 0 37 28 0 0 0 0 1 1 6187.6 5677 2998 5467 13088 15040 15040 1041 1 EVESIGAHLNAYSTR Unmodified 1645.806 0.80599822 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 6 0.816 1 1 1 51.088 51.088 3 3.1933E-05 15042 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.421 76.864 109.04 0 96.585 85.175 83.188 164.95 102 0 93 84 83 158 2 0 2 2 2 3 55046 5678 2998 5467 13089;13090;13091 15041;15042;15043;15044 15044 4 EVEVLVAR Unmodified 913.52328 0.52328142 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 0 4 0 1 53.272 53.272 2 0.061464 17801 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.478 24.984 0 0 0 29.725 46.751 0 0 0 0 28 46 0 0 0 0 1 1 0 7348.4 5679 2125 5468 13092 15045 15045 1 EVFAEAVR Unmodified 919.47633 0.47633123 1837 P84096 Rhog Rho-related GTP-binding protein RhoG yes yes 0 0 0 0 5 0 1 51.262 51.262 2 0.058838 16566 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.895 19.003 78.545 81.766 74.766 0 74.072 97.024 74 83 74 0 74 93 1 1 1 0 1 1 7934.3 5680 1837 5469 13093 15046 15046 1 EVFDNDGKPR Unmodified 1175.5571 0.55710075 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 1 5 0.816 1 1 1 42.718 42.718 3 2.2995E-05 12545 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.65 70.563 1094.5 815.75 569.86 986.31 786.76 1177.9 1027 845 564 947 828 1126 5 5 3 5 4 4 195670 5681 1786 5470 13094;13095;13096 15047;15048;15049;15050;15051 15049 5 EVFDNDGKPR Deamidation (N) 1176.5411 0.54111633 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 1 0 1 8.5 4.5 1 1 44.316 44.316 3 0.0025958 13673 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.155 50.811 147.68 105.52 157.18 150.44 235.23 289.64 139 111 158 148 241 278 1 1 1 1 2 2 25816 5682 1786 5470 13097;13098 15052;15053 15052 715 2 EVFDWILDQGYYSER Unmodified 1918.8737 0.87374344 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 8.5 2.69 1 1 1 1 93.516 93.516 3 3.6443E-05 34637 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.344 55.819 39.522 9.576 30.145 30.085 70.411 29.486 37 9 28 28 70 28 2 1 1 2 5 2 15925 5683 1986 5471 13099;13100;13101;13102 15054;15055;15056;15057;15058 15056 5 EVFEMATR Unmodified 981.45897 0.45896661 3254 Q9QUI0;Q62159 Rhoa;Rhoc Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 0 6 0 1 55.128 55.128 2 0.052889 17752 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.464 37.645 0 68.053 66.247 0 83.495 96.755 0 65 65 0 83 93 0 1 1 0 1 1 9233.8 5684 3254 5472 13103 15059 15059 1 EVFETATR Unmodified 951.46616 0.46616048 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 0 4 0 1 44.639 44.639 2 0.0043048 13798 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.74 30.989 421.85 392.9 0 381.46 0 0 395 396 0 349 0 0 1 1 0 1 0 0 196820 5685 1733 5473 13104 15060 15060 1 EVFGDTLNESR Unmodified 1265.5888 0.58879481 221 A0A0R4J2B2;Q6WVG3;Q8C7J6;Q50H33 Kctd12;Kctd12b;Kctd8 BTB/POZ domain-containing protein KCTD12;BTB/POZ domain-containing protein KCTD8 yes no 0 0 0 0 4.5 0.5 1 1 54.139 54.139 2 0.0010897 18255 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.474 38.714 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5686 221 5474 13105;13106 15061;15062 15061 2 EVFGTFGIPFLLR Unmodified 1494.8235 0.82348619 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 0 11 0 1 98.012 98.012 2 0.00034218 32143 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.465 68.906 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 5545.2 5687 848 5475 13107 15063 15063 1 EVFPTLAAK Unmodified 974.54368 0.54368251 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 7.5 0.5 1 1 65.035 65.035 2 0.0047651 20900 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.731 21.466 79.402 38.738 37.71 109.75 92.236 69.29 74 37 37 102 93 65 1 1 1 1 1 1 5230.1 5688 3327 5476 13108;13109 15064;15065 15065 2 EVFTEQADLSGITEAK Unmodified 1736.8469 0.84685999 174 A0A0R4J0I1 yes yes 0 0 0 0 4 0 1 70.21 70.21 3 4.8207E-05 25469 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.385 62.237 20.244 28.427 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 0 2371.5 5689 174 5477 13110 15066 15066 1 EVGEALEER Unmodified 1030.4931 0.49310351 809 E0CYX9;Q3TC33 Ccdc127 Coiled-coil domain-containing protein 127 yes no 0 0 0 0 1.5 0.5 1 1 44.062 44.062 2 0.0011455 12561 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.52 41.955 59.6 24.752 117.3 144.28 34.94 147.18 56 28 116 139 37 139 1 1 2 2 1 2 24143 5690 809 5478 13111;13112 15067;15068 15067 2 EVGELQAQTAALPLEQASK Unmodified 1982.032 0.032034995 842 E9PX29;Q91ZE6;E9PZC2 Sptbn4 yes no 0 0 0 0 5 0 1 69.546 69.546 3 0.042988 25163 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.126 12.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5691 842 5479 13113 15069 15069 1 EVGEVLCTDPLVSK Unmodified 1544.7756 0.7756093 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 5.33 0.471 2 1 71.174 71.174 2;3 5.4274E-05 25940 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.911 49.787 168.2 125 118.32 121.84 120.37 20.254 158 130 120 120 120 19 2 2 1 2 1 1 21875 5692 2469 5480 13114;13115;13116 15070;15071;15072 15070 3 EVGGETGSPELSGVPR Unmodified 1569.7635 0.76346471 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 2 0 1 51.086 51.086 2 0.0046129 16665 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.222 7.4789 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5693 2125 5481 13117 15073 15073 1 EVGIPPEQSLETAK Unmodified 1496.7722 0.77223848 2836;2170 Q641P0;Q99JY9 Actr3b;Actr3 Actin-related protein 3B;Actin-related protein 3 no no 0 0 0 0 4.5 0.5 1 1 59.375 59.375 3 0.00061081 21188 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.842 42.9 78.768 72.672 103.52 46.791 0 59.696 74 74 102 46 0 56 1 1 2 1 0 1 23509 5694 2170;2836 5482 13118;13119 15074;15075;15076 15074 3 EVGKDVSDEK Unmodified 1104.5299 0.52988294 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 1 7 3.54 1 1 1 1 41.164 41.164 3 0.00093402 11602 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.306 55.525 1488.6 845.12 1568.2 966.98 933.75 1244 1400 879 1543 973 976 1192 4 3 4 3 3 3 141800 5695 3011 5483 13120;13121;13122;13123 15077;15078;15079;15080 15080 4 EVGLDLFFPK Unmodified 1163.6227 0.62266112 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 10 2.16 1 1 1 86.45 86.45 2;3 0.00050785 30253 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.256 31.784 59.864 0 77.626 48.038 38.702 9 56 0 74 46 37 9 1 0 2 1 1 1 7993 5696 3261 5484 13124;13125;13126 15081;15082;15083 15082 3 EVGNLLLENSQLLETK Deamidation (N) 1799.9517 0.95165941 917 E9Q6B6;E9Q6E0;J3QNR6;K3W4S4;Q9ESN9;D3YWH6 Mapk8ip3 C-Jun-amino-terminal kinase-interacting protein 3 yes no 0 1 0 0 6 0 1 82.38 82.38 3 0.00052837 30586 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.246 38.923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5697 917 5485 13127 15084 15084 247 1 EVGSIIGK Unmodified 801.45962 0.45961853 1668;394;1647 P60335;A0A087WR61;A0A087WSI1;A0A1L1SUS5;A0A1L1SRP9;A0A1L1SQ99;A0A087WRH3;A0A0R4J044;P57724;Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHN3;A0A2R8VHI3;P57722;E9Q7D8 Pcbp1;Pcbp4;Pcbp2;Pcbp3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 4;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 0 8.5 2.69 1 1 1 1 56.084 56.084 2 0.0019934 17452 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.27 40.722 1202.9 689.11 1216.5 386.38 1479.5 961.2 1131 743 1184 398 1463 937 4 4 4 2 4 3 83169 5698 1668;394;1647 5486 13128;13129;13130;13131 15085;15086;15087;15088 15086 4 EVGTSYGCYFVPAFSGLYAPYWEPSAR Unmodified 3073.3956 0.39564465 583 B1ASZ3;Q64516;Q9WU65 Gyk;Gk;Gk2 Glycerol kinase;Glycerol kinase 2 yes no 0 0 0 0 8.5 0.5 1 1 95.581 95.581 3 0.0013459 34520 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.985 23.652 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 962.17 5699 583 5487 13132;13133 15089;15090 15089 2 EVGVALQEK Unmodified 971.52876 0.52876073 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 7.5 3.2 1 2 1 52.231 52.231 2;3 0.0008758 17135 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.75 29.999 325.36 185.11 344.11 320.32 242.27 303.07 306 195 343 316 241 287 4 3 4 4 3 2 33653 5700 1548 5488 13134;13135;13136;13137 15091;15092;15093;15094 15091 4 EVGVYEALK Unmodified 1006.5335 0.53351176 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 5 0 1 60.595 60.595 3 0.0023907 20963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.643 37.419 0 38.414 57.075 27.202 0 20.254 0 37 56 28 0 19 0 1 1 1 0 1 6720.5 5701 1373 5489 13138 15095 15095 1 EVGVYEALKDDSWLK Unmodified 1750.8778 0.87776618 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 1 8.29 3.1 1 2 1 1 2 77.107 77.107 3;4 6.0162E-11 29147 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.96 81.452 1528.1 1183.6 1800.4 1326 1902.8 1655.3 1443 1234 1791 1341 1922 1602 9 9 9 8 6 8 357740 5702 1373 5490 13139;13140;13141;13142;13143;13144;13145 15096;15097;15098;15099;15100;15101;15102;15103;15104;15105 15104 10 EVICQVLYLGNVIDYK Unmodified 1924.9968 0.99683546 1222 Q80VX2;O54901;E9QMY1 Cd200 OX-2 membrane glycoprotein yes no 0 0 0 0 9.5 0.5 1 1 92.748 92.748 3 0.00070706 30131 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.862 40.307 9.5583 38.571 0 0 0 0 9 38 0 0 0 0 1 2 0 0 0 0 10516 5703 1222 5491 13146;13147 15106;15107 15107 2 EVIEAIAECAFK Unmodified 1378.6803 0.68025235 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 84.094 84.094 2;3 4.6829E-09 32646 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.06 56.702 0 39.368 0 0 38.702 0 0 37 0 0 37 0 0 1 0 0 1 0 2935.5 5704 3373 5492 13148;13149;13150;13151 15108;15109;15110;15111 15111 4 EVIELPLTNPELFQR Unmodified 1796.9672 0.96724989 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 5.67 0.471 1 2 84.593 84.593 2;3 0.00029901 31413 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.246 34.606 0 29.792 19.685 49.673 27.906 0 0 28 19 47 28 0 0 1 1 2 1 0 9694.5 5705 1726 5493 13152;13153;13154 15112;15113;15114 15113 3 EVIHNQLLEK Unmodified 1221.6717 0.67173657 2927 Q9CQF7;Q9CWM4 Pfdn1 Prefoldin subunit 1 yes no 0 0 0 0 6 0 1 51.655 51.655 3 0.00024866 16153 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.979 57.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5706 2927 5494 13155 15115 15115 1 EVIPQDIPSK Unmodified 1124.6077 0.60773933 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 5.5 0.5 1 1 58.194 58.194 2;3 0.0021269 19223 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.465 41.17 0 59.584 0 59.86 71.686 86.432 0 56 0 56 74 83 0 1 0 1 1 1 4143.1 5707 3285 5495 13156;13157 15116;15117 15117 2 EVLAELEALEGR Unmodified 1327.6983 0.69834526 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 82.877 82.877 2;3 0.0011437 31541 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.942 42.215 59.562 93.895 62.283 47.427 64.501 38.169 56 93 65 46 65 37 1 2 2 1 2 1 5797 5708 172 5496 13158;13159 15118;15119;15120 15120 3 EVLASQLLVLTGQR Unmodified 1525.8828 0.88279198 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 10.5 0.5 1 1 80.529 80.529 2;3 0.0015526 25336 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.414 31.986 39.666 6.9013 0 0 28.291 29.041 37 9 0 0 28 28 1 1 0 0 1 1 6499.3 5709 63 5497 13160;13161 15121;15122 15121 2 EVLDQVER Unmodified 986.50327 0.50327426 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 3 0 1 47.473 47.473 2 0.019971 15559 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.264 23.487 0 0 18.837 38.624 36.928 0 0 0 19 37 37 0 0 0 1 1 1 0 11639 5710 1048 5498 13162 15123 15123 1 EVLDSTTSSL Unmodified 1050.5081 0.50808487 3283 Q9QYS2 Grm3 Metabotropic glutamate receptor 3 yes yes 0 0 0 0 4 0 1 64.278 64.278 2 1.2849E-05 22825 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.34 108.19 20.232 11.127 16.542 0 0 26.65 19 12 16 0 0 25 1 1 1 0 0 1 4686.9 5711 3283 5499 13163 15124 15124 1 EVLEDFAEDGEK Unmodified 1379.6093 0.60925548 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 2.33 0.471 2 1 67.029 67.029 2;3 1.236E-05 24126 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.08 77.462 138.47 45.208 132.49 131.27 155.2 114.97 130 47 129 130 157 111 3 2 2 3 2 1 24972 5712 1653 5500 13164;13165;13166 15125;15126;15127 15126 3 EVLEDFAEDGEKK Unmodified 1507.7042 0.70421849 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 1 4 0 1 62.212 62.212 4 0.042805 21998 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.645 24.375 0 28.836 57.212 37.031 0 0 0 28 56 37 0 0 0 1 1 1 0 0 2584.3 5713 1653 5501 13167 15128 15128 1 EVLEGLDYLHR Unmodified 1342.6881 0.68811492 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 0 0 0 6 0 1 64.351 64.351 3 1.9696E-05 22058 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.014 52.957 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5714 3386 5502 13168 15129 15129 1 EVLEQVER Unmodified 1000.5189 0.51892433 1535 P39688;D3YZ57 Fyn Tyrosine-protein kinase Fyn;Non-specific protein-tyrosine kinase no no 0 0 0 0 3 0 1 47.901 47.901 2 0.0024655 15682 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128 4.8396 39.2 56.331 36.457 0 56.948 47.411 37 56 37 0 56 46 1 1 1 0 1 1 7296.6 5715 1535 5503 13169 15130 15130 1 EVLGDAVPDDILTEAILK Unmodified 1910.0248 0.024824352 1137 J3KMK0;L7N209;Q3TGM7;Q69ZS7;A0A1W2P6V8 Gm9923;Hbs1l HBS1-like protein yes no 0 0 0 0 5 0 1 94.011 94.011 3 6.7646E-05 35179 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.317 30.989 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 836.99 5716 1137 5504 13170 15131 15131 1 EVLGSLPNVFSALCLNAR Unmodified 1959.0248 0.024781548 459 Q7TMY8;A2AFQ0;F6XP90 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 11 0 1 94.047 94.047 3 0.0014089 30441 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.157 27.019 39.256 35.979 44.368 68.401 0 0 37 37 46 65 0 0 1 1 1 1 0 0 4641.1 5717 459 5505 13171 15132 15132 1 EVLHELYK Unmodified 1029.5495 0.54949617 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 6 0.816 1 1 1 53.947 53.947 3 0.0031567 17214 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.426 38.657 497 170.84 181.48 168.69 388.47 310.85 465 185 186 167 389 302 3 1 2 1 2 2 48862 5718 3376 5506 13172;13173;13174 15133;15134;15135 15134 3 EVLLDEDDDLWIALR Unmodified 1813.9098 0.90979459 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 8.2 3.97 1 1 1 2 91.846 91.846 3 2.5822E-11 33998 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.13 89.916 89.59 53.38 78.94 30.604 23.329 29.439 84 56 76 28 23 28 3 3 4 1 2 2 8288.5 5719 1160 5507 13175;13176;13177;13178;13179 15136;15137;15138;15139;15140;15141;15142 15137 7 EVLLDIK Unmodified 828.49567 0.49566969 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 67.49 67.49 2 0.016214 23563 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 7.0548 569.63 462.84 712.09 645.15 750.7 444.36 537 474 713 642 759 431 3 2 3 3 2 1 67813 5720 2133 5508 13180;13181 15143;15144;15145 15143 3 EVLLDIKR Unmodified 984.59678 0.59678072 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 1 8 0 1 56.642 56.642 3 0.011604 16963 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.605 12.12 229.21 288.94 185.4 280.78 0 295.28 216 289 200 267 0 277 1 1 1 1 0 1 27767 5721 2133 5509 13182 15146 15146 1 EVLLLMSACK Unmodified 1162.609 0.60900166 362 Q8BGN8;A0A286YDB6 Synpr Synaptoporin yes no 0 0 0 0 10 1 1 1 76.31 76.31 3 0.0041334 25718 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.426 22.901 0 39.368 0 40.441 0 84 0 37 0 37 0 84 0 1 0 1 0 1 12755 5722 362 5510 13183;13184 15147;15148 15147 2 EVLNALGK Unmodified 842.48617 0.48616764 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 8.5 0.5 1 1 60.491 60.491 2 0.012445 18092 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.355 26.207 158.8 37.608 105.27 162.51 207.74 221.13 148 37 102 158 213 213 1 1 1 2 2 2 13233 5723 2168 5511 13185;13186 15149;15150 15150 2 EVLPALEGNK Unmodified 1068.5815 0.58152458 1261 O70591;F8WJ30 Pfdn2 Prefoldin subunit 2 yes no 0 0 0 0 6 0 1 61.337 61.337 3 0.0012978 20677 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.275 34.578 39.701 0 0 39.582 45.647 18.951 37 0 0 37 46 19 1 0 0 1 1 1 2709 5724 1261 5512 13187 15151 15151 1 EVLPDHVGVLEGIDLSPEITR Unmodified 2287.206 0.20597662 2710 Q8VEH5 Epm2aip1 EPM2A-interacting protein 1 yes yes 0 0 0 0 4 0 1 78.134 78.134 3 3.498E-07 29209 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.69 46.612 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 2802.9 5725 2710 5513 13188 15152 15152 1 EVLQALEELAVNYDQK Unmodified 1860.9469 0.94690838 1481;2139;1507 P28738;Q61768;E9QAK5;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5A no no 0 0 0 0 7 0.707 1 2 1 98.421 98.421 3;4 9.0239E-06 36854 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.58 80.364 20.387 3 29.449 52.653 12.872 33.745 19 3 28 50 14 32 1 1 1 3 1 2 8729.3 5726 1481;2139;1507 5514 13189;13190;13191;13192 15153;15154;15155;15156 15153 4 EVLSWQVPLLFQGLYQR Unmodified 2075.1204 0.12039649 884 E9Q247;Q6AXF6 Sidt1 SID1 transmembrane family member 1 yes no 0 0 0 0 11.5 0.5 1 1 99.57 99.57 3 5.0139E-06 32803 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.461 55.317 5.2902 9.1385 4.835 0 0 0 5 9 5 0 0 0 1 1 1 0 0 0 3968 5727 884 5515 13193;13194 15157;15158 15157 2 EVMIVGVGEK Unmodified 1059.5634 0.56343168 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 9.25 3.77 1 1 2 62.787 62.787 2;3 5.3025E-07 22298 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.55 83.067 226.47 178.6 241.36 169.37 175.79 143.16 213 186 241 167 176 139 3 4 4 3 2 2 34867 5728 484;2493 5516 13195;13196;13197;13198 15159;15160;15161;15162 15162 4 EVMLALTVLETCVK Unmodified 1604.8518 0.85175113 2058 Q5SRX1;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 8 0 1 95.756 95.756 3 0.015057 34566 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.644 21.537 0 0 8.8364 20.24 0 20.254 0 0 9 19 0 19 0 0 1 1 0 1 720.87 5729 2058 5517 13199 15163 15163 1 EVMQEVAQLSQFDEELYK Unmodified 2185.0249 0.024900707 1460 Q8C483;P26638;A2AFS0 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 5 0 1 90.59 90.59 3 5.2076E-07 34435 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.049 73.284 9.5475 4.4315 14.641 4.3266 14.13 9.1908 9 5 14 5 14 9 1 1 1 1 1 1 1856.4 5730 1460 5518 13200 15164 15164 1 EVMQMLVELAK Unmodified 1289.6723 0.6723302 1316 P06745;A0A0U1RP97;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 10.3 1.6 1 1 1 2 1 92.592 92.592 2;3 2.6525E-05 33070 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.214 59.246 117.85 94.919 58.296 0 57.579 68.483 112 93 56 0 56 65 3 2 2 0 2 2 64129 5731 1316 5519 13201;13202;13203;13204;13205;13206 15165;15166;15167;15168;15169;15170;15171;15172 15167 8 EVMVDDR Unmodified 862.38547 0.38546731 1600 P51150;A0A0N4SVG9;A0A0N4SVR6 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 2 0 1 39.289 39.289 2 0.016609 11517 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.65 56.144 118.47 0 105.61 93.32 108.19 105.64 111 0 102 93 111 102 1 0 1 1 1 1 12734 5732 1600 5520 13207 15173 15173 1 EVNENFAIDLIAQQPVNEVEHR Unmodified 2563.2667 0.26667939 1610 P52503;A0A1Y7VM38;A0A1Y7VKP8 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 0 4 0 1 75.56 75.56 3 3.911E-16 27944 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.945 71.741 9.657 0 0 0 19.874 0 9 0 0 0 19 0 1 0 0 0 1 0 5181.1 5733 1610 5521 13208 15174 15174 1 EVNGHEVGNNPK Deamidation (N) 1293.5949 0.59494282 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 1 0 0 4 0 1 36.518 36.518 3 0.00061619 9912 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.739 55.9 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 4198.8 5734 3241 5522 13209 15175 15175 1111 1 EVNGLPIMESNYFDPSK Deamidation (N) 1939.8873 0.88734459 1174 O09111 Ndufb11 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial yes yes 0 1 0 0 5 0 1 81.72 81.72 3 0.0042654 30984 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.68 20.531 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2964.7 5735 1174 5523 13210 15176 15176 319 1 EVNGQPVGSDPR Deamidation (N) 1254.584 0.58404378 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 1 0 0 1.5 0.5 1 1 36.786 36.786 2 0.003901 9765 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.698 28.702 9.4617 38.73 0 0 18.867 29.31 9 37 0 0 19 28 1 1 0 0 1 1 5381 5736 3341 5524 13211;13212 15177;15178 15177 1133 2 EVNLAVENAK Unmodified 1085.5717 0.57168818 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 5.5 0.5 1 1 53.468 53.468 2 0.00014867 17602 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.88 48.3 39.507 17.25 18.064 28.273 66.691 0 37 19 19 28 65 0 1 1 1 1 1 0 2771.8 5737 1958 5525 13213;13214 15179;15180 15179 2 EVNSTDWDSK Unmodified 1179.5044 0.50439647 2648 Q8R1T1 Chmp7 Charged multivesicular body protein 7 yes yes 0 0 0 0 4 0 1 51.126 51.126 3 0.033938 16783 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.061 18.21 39.522 0 30.097 0 0 39.442 37 0 28 0 0 37 1 0 1 0 0 1 2197.2 5738 2648 5526 13215 15181 15181 1 EVPDGDCR Unmodified 946.38144 0.38144457 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 4.75 4.82 1 1 1 1 31.941 31.941 2 0.0012376 7629 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.83 96.351 734.37 397.16 322.83 660.01 903.51 646.86 688 418 322 637 914 631 5 4 4 5 5 5 236120 5739 2131 5527 13216;13217;13218;13219 15182;15183;15184;15185;15186;15187 15182 6 EVPLENQLQSMEVTEA Unmodified 1815.856 0.85604446 1460 Q8C483;P26638 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 2.5 0.5 1 1 80.5 80.5 3 0.0047604 30362 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.958 32.49 0 9.576 0 9.837 9.0934 9.3345 0 9 0 9 9 9 0 1 0 1 1 1 5044.6 5740 1460 5528 13220;13221 15188;15189 15189 2 EVPLIFPK Unmodified 941.5586 0.5586043 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 73.693 73.693 2 0.017306 25044 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.229 41.991 157.84 73.407 100.23 0 158.26 173.51 148 74 93 0 157 167 2 1 1 0 2 2 10762 5741 3305 5529 13222;13223 15190;15191 15190 2 EVPVVHTETK Unmodified 1137.603 0.60298831 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 7 3.54 1 1 1 1 41.92 41.92 3 5.8413E-06 12141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.67 32.13 458.69 357.21 331.46 232.81 242.39 348.06 431 370 324 222 241 333 4 4 2 3 2 3 60850 5742 369;3345 5530 13224;13225;13226;13227 15192;15193;15194;15195 15193 4 EVQAAQAR Unmodified 871.45118 0.45117911 1325 P08226;A0A1B0GX15;G3UWN5;G3UZM8 Apoe Apolipoprotein E yes no 0 0 0 0 3.5 0.5 1 1 26.671 26.671 2 0.017927 5343 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.474 28.842 34.336 33.412 38.029 24.708 59.794 53.314 32 32 37 23 60 51 1 1 1 1 2 1 40948 5743 1325 5531 13228;13229 15196;15197 15197 2 EVQDGIAPR Unmodified 983.50361 0.50360861 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 3 0 1 39.489 39.489 2 3.3918E-05 11773 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 137.69 78.977 88.427 0 106.29 81.346 161.53 0 83 0 102 83 158 0 1 0 1 1 1 0 34378 5744 1641 5532 13230 15198 15198 1 EVQDLAFLDVVSK Unmodified 1461.7715 0.7715102 919;937 E9Q6Q4;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 6 0.816 1 1 1 84.244 84.244 3 7.5272E-05 32062 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.614 50.711 138.82 52.406 68.552 30.604 96.29 58.62 130 56 65 28 93 56 3 2 1 1 2 2 29918 5745 919;937 5533 13231;13232;13233 15199;15200;15201 15199 3 EVQSSEAEALAR Unmodified 1288.6259 0.62590859 2055 Q5PR73 Diras2 GTP-binding protein Di-Ras2 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 44.446 44.446 2 7.5898E-15 13685 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.63 98.341 138.82 32.033 85.442 85.627 0 113 130 32 83 83 0 106 2 1 1 1 0 2 30914 5746 2055 5534 13234;13235;13236;13237 15202;15203;15204;15205 15202 4 EVQTAVR Unmodified 801.43447 0.43446642 2541 Q8CGP0;Q9D2U9 Hist3h2bb;Hist3h2ba Histone H2B type 3-B;Histone H2B type 3-A yes no 0 0 0 0 4 0 1 31.841 31.841 2 0.0062854 7776 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142.36 51.656 0 82.201 110.94 95.037 0 114.06 0 79 111 93 0 107 0 1 1 1 0 1 36515 5747 2541 5535 13238 15206 15206 1 EVQTNDLK Unmodified 945.47673 0.47672516 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 8.5 4.5 1 1 43.994 43.994 2 0.014274 13529 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.716 7.5377 39.342 0 60.394 0 0 125.48 37 0 56 0 0 120 1 0 1 0 0 2 9198.9 5748 1844 5536 13239;13240 15207;15208 15207 2 EVSAYIK Unmodified 808.43307 0.43306943 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 52.347 52.347 2;3 0.0053172 15699 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.986 23.951 254.31 320.19 442.53 329.58 695.09 0 240 324 435 316 679 0 2 3 3 2 4 0 79819 5749 1729 5537 13241;13242;13243;13244 15209;15210;15211;15212 15210 4 EVSDGIVAPGYEEEALK Unmodified 1804.8731 0.87307474 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 3 0.816 1 1 1 66.886 66.886 3 1.3426E-06 24348 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.04 76.013 20.244 46.752 49.448 36.81 36.338 38.405 19 46 47 37 37 37 1 2 1 2 1 2 24630 5750 2977 5538 13245;13246;13247 15213;15214;15215 15214 3 EVSEHGR Unmodified 812.37768 0.37767982 1813 Q4FE56;P70398;F8VPU6 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 2 0 1 16.801 16.801 2 0.048867 2629 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.847 47.274 0 6.384 0 5.3549 5.8527 5.163 0 6 0 5 6 5 0 1 0 1 1 1 393 5751 1813 5539 13248 15216 15216 1 EVSFQATGDSEWR Unmodified 1510.6688 0.66883604 2676 Q8R5L1;O35658 C1qbp Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 0 6.25 3.96 1 1 1 1 57.766 57.766 2;3 2.3668E-08 19999 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.926 67.553 0 28.808 58.864 0 106.69 0 0 28 56 0 102 0 0 1 1 0 1 0 5277.7 5752 2676 5540 13249;13250;13251;13252 15217;15218;15219;15220 15219 4 EVSLDSR Unmodified 804.39775 0.39774656 1102 Q9QZB0;G5E8E0;F8WH97 Rgs17 Regulator of G-protein signaling 17 no no 0 0 0 0 4 0 1 39.141 39.141 2 0.027262 11198 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.677 29.389 128.01 148.84 0 188.43 209.59 132.6 120 148 0 176 213 130 1 1 0 1 1 1 9903.1 5753 1102 5541 13253 15221 15221 1 EVSMDDHK Unmodified 959.40185 0.40184566 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 3.5 0.5 1 1 37.137 37.137 3 0.00025164 10178 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 141.48 18.964 88.692 72.756 249.23 210.3 93.306 350.18 83 74 239 206 93 331 1 1 1 1 1 2 24278 5754 2699 5542 13254;13255 15222;15223 15223 2 EVSSHAQR Unmodified 912.44134 0.44134271 2042 Q5DTT2 Psd PH and SEC7 domain-containing protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 16.708 16.708 3 0.0011615 2444 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.17 55.663 0 9.4951 11.064 6.0185 17.156 10.17 0 9 11 6 17 10 0 1 2 1 2 2 1094.1 5755 2042 5543 13256;13257 15224;15225 15224 2 EVSSKEEQSPVK Unmodified 1345.6725 0.67252444 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 5.5 0.5 1 1 40.289 40.289 3 0.0014752 11357 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.56 40.436 0 47.816 67.461 60.115 86.818 39.442 0 46 65 55 83 37 0 1 1 1 1 1 6498.5 5756 1382 5544 13258;13259 15226;15227 15226 2 EVSSNEGR Unmodified 876.39372 0.39372381 2346 Q80ZJ1 Rap2a Ras-related protein Rap-2a yes yes 0 0 0 0 5.33 5.44 1 1 1 22.579 22.579 2 0.00035167 3640 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 154.71 91.42 176.96 266.47 154.83 201.76 378.41 285.42 167 264 167 199 380 277 2 2 3 2 3 2 43844 5757 2346 5545 13260;13261;13262 15228;15229;15230 15228 3 EVSTYIK Unmodified 838.44363 0.44363412 1341 P10126;D3Z3I8;D3YZ68 Eef1a1 Elongation factor 1-alpha 1 yes no 0 0 0 0 9 2.94 1 1 1 50.806 50.806 2;3 0.0051055 15863 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.919 35.143 512.87 468.52 328.11 492.3 505.49 94.972 482 478 330 477 508 93 3 3 2 3 3 1 75833 5758 1341 5546 13263;13264;13265 15231;15232;15233 15231 3 EVSYGEGK Unmodified 867.39741 0.39741221 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 0 6.5 3.77 2 1 1 41.002 41.002 2;3 0.0051692 12082 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.486 13.525 60.088 117.1 107.13 263.6 173.63 245.57 56 111 111 250 176 232 1 1 2 4 2 3 20301 5759 1695 5547 13266;13267;13268;13269 15234;15235;15236;15237 15235 4 EVTHNIHYETYR Unmodified 1560.7321 0.732105 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 6.5 3.77 2 1 1 35.731 35.731 3;4 5.3203E-06 9029 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.368 74.888 59.408 74.878 247.87 146.79 193.88 66.951 56 74 241 149 194 65 2 2 5 3 3 2 34010 5760 402;3384 5548 13270;13271;13272;13273 15238;15239;15240;15241;15242 15242 5 EVTHSAAVEALK Unmodified 1253.6616 0.66156582 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;E9PXG2;J3QMR8 Dlg4 Disks large homolog 4 yes no 0 0 0 0 5 0.816 1 1 1 46.013 46.013 3 2.66E-15 14033 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.45 111.19 0 108.53 0 78.486 127.41 144.54 0 102 0 74 130 139 0 1 0 1 1 1 18589 5761 407 5549 13274;13275;13276 15243;15244;15245 15244 3 EVVAASHELGQDYEHVTMLR Unmodified 2283.0954 0.095380308 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0 1 59.814 59.814 4 1.3772E-08 20875 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.953 51.968 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 2959.7 5762 2186 5550 13277 15246 15246 1 EVVAGSHELGQDYEHVTMLQER Unmodified 2526.1809 0.18090085 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 4 0 1 56.192 56.192 4 1.1892E-09 19240 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.454 48.574 48.688 84.342 41.066 76.317 112.6 0 46 83 46 74 111 0 1 1 1 1 1 0 8547.9 5763 2148 5551 13278 15247 15247 1 EVVDSTTSSL Unmodified 1036.4924 0.49243481 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 2 0 1 56.889 56.889 2 3.7016E-05 19285 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.616 52.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5764 1903 5552 13279 15248 15248 1 EVVDSYLPVILDMIK Unmodified 1732.9321 0.93210994 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 106 106 3 2.6692E-08 36607 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.12 80.73 81.283 144.44 89.639 199.63 185.34 291.52 76 143 85 189 190 280 3 7 3 4 6 7 60166 5765 859 5553 13280;13281;13282;13283;13284;13285 15249;15250;15251;15252;15253;15254;15255;15256;15257;15258;15259;15260 15252 12 EVVEDINK Unmodified 944.48148 0.48147619 2552 Q8CI32 Bag5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 0 4 0 1 50.386 50.386 2 0.031071 16456 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.692 18.522 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 2379.5 5766 2552 5554 13286 15261 15261 1 EVVETPLLHPER Unmodified 1417.7565 0.75652884 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 4.5 0.5 1 1 52.591 52.591 3 3.2525E-05 17484 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.005 55.627 69.745 0 0 109.42 109.77 38.171 65 0 0 102 111 37 1 0 0 2 2 1 13781 5767 1555 5555 13287;13288 15262;15263 15262 2 EVVKPLLVSTLGEK Unmodified 1510.897 0.89704506 3394 Q9Z2D6 Mecp2 Methyl-CpG-binding protein 2 yes yes 0 0 0 1 9 0 1 70.753 70.753 3 0.011415 23023 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.077 38.101 60.088 0 0 0 116.11 0 56 0 0 0 111 0 1 0 0 0 1 0 4162.2 5768 3394 5556 13289 15264 15264 1 EVVPDFPEDK Unmodified 1173.5554 0.55536941 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3.5 0.5 2 2 62.475 62.475 2;3 0.0025288 22411 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.303 37.959 0 127.57 70.139 51.067 29.288 49.036 0 121 74 47 28 46 0 3 3 1 1 1 18613 5769 510 5557 13290;13291;13292;13293 15265;15266;15267;15268 15265 4 EVVQNFAK Unmodified 933.49198 0.4919813 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 0 8.4 2.42 1 1 2 1 52.09 52.09 2;3 2.3843E-06 15566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.77 56.116 1036.7 805.88 1082 765.52 1176.6 589.36 976 832 1081 767 1171 569 5 4 5 4 4 3 124340 5770 2931 5558 13294;13295;13296;13297;13298 15269;15270;15271;15272;15273 15270 5 EVVSYSK Unmodified 810.41233 0.41233399 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 7 0 1 45.312 45.312 2 0.019014 12365 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.46 50.997 78.833 63.141 42.095 78.373 0 88.478 74 65 46 74 0 83 1 1 1 1 0 1 3958.7 5771 743 5559 13299 15274 15274 1 EVWDMFGVFFFNHPDLR Unmodified 2154.9986 0.9985668 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 11.5 1.5 1 1 101.94 101.94 3 0.0001215 33069 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.203 46.781 7.5028 31.414 0 20.767 0 20.254 7 30 0 19 0 19 1 2 0 1 0 1 2365 5772 3152 5560 13300;13301 15275;15276 15275 2 EVWEELDGLDPNR Unmodified 1570.7264 0.72635092 267 A0A1C7CYU3;Q02819;A0A1B0GR41 Nucb1 Nucleobindin-1 yes no 0 0 0 0 3.5 0.5 1 1 76.657 76.657 3 0.0073095 28910 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.915 34.934 0 9.576 0 9 9.414 0 0 9 0 9 9 0 0 1 0 1 1 0 2463.7 5773 267 5561 13302;13303 15277;15278 15277 2 EVWEMELDR Unmodified 1205.5387 0.53867349 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 4 0 1 66.838 66.838 2 0.014586 23988 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.27 31.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5774 2363 5562 13304 15279 15279 1 EVWNTYELDLVNYQNK Unmodified 2026.9636 0.96362108 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 4 1 1 80.105 80.105 3 2.7688E-06 30818 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.394 61.906 137.92 6.2573 78.424 18.445 95.65 86.853 129 9 74 19 93 83 3 1 2 1 2 2 7531.5 5775 3204 5563 13305;13306 15280;15281;15282 15281 3 EVWYFGLQYVDNK Unmodified 1659.7933 0.79330827 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 8 0 1 85.894 85.894 3 0.03531 30956 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.998 17.617 20.134 28.121 18.769 0 18.867 29.31 19 28 19 0 19 28 1 1 1 0 1 1 2532.6 5776 1451 5564 13307 15283 15283 1 EVYEEAGVK Unmodified 1022.492 0.49204087 1337;2651 P0C028;P0C027;Q8R2U6 Nudt11;Nudt10;Nudt4 Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha;Diphosphoinositol polyphosphate phosphohydrolase 2 no no 0 0 0 0 4 0 1 48.397 48.397 2 0.00073044 15492 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.81 65.175 69.089 63.558 56.43 0 116.11 0 65 65 56 0 111 0 1 1 1 0 1 0 3668.7 5777 1337;2651 5565 13308 15284 15284 1 EVYELLDTPGR Unmodified 1290.6456 0.6455814 3146 Q9DCL9;D3Z6P1;D6RCU8 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 0 4 0 1 67.127 67.127 2 0.0018245 24151 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.054 52.825 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 2485.4 5778 3146 5566 13309 15285 15285 1 EVYMGNVIQGGEGQAPTR Unmodified 1904.9051 0.90506034 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 5 0 1 57.641 57.641 3 3.1284E-07 19594 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.829 73.774 0 39.368 0 39.95 26.124 38.697 0 37 0 37 28 37 0 1 0 1 1 1 14844 5779 2622 5567 13310 15286 15286 1 EVYQQQQYGSGGR Unmodified 1498.6801 0.68006943 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 4.5 0.5 1 1 37.388 37.388 3 0.00037165 9861 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.277 46.046 29.822 0 37.256 58.988 0 0 28 0 37 56 0 0 1 0 1 1 0 0 2537.4 5780 1906 5568 13311;13312 15287;15288 15288 2 EWAHATIIPK Unmodified 1164.6291 0.62914348 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 7 0 1 56.438 56.438 3 0.024286 17564 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.765 8.8053 69.346 0 66.993 67.052 0 99.138 65 0 65 65 0 93 1 0 1 1 0 1 5440.5 5781 2272 5569 13313 15289 15289 1 EWCFKPCEIR Unmodified 1423.6377 0.63767603 3307 Q9R111 Gda Guanine deaminase yes yes 0 0 0 1 13 0 1 58.315 58.315 3 0.0028685 20300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.593 55.395 108.04 128.91 127.41 111.51 118.21 124.55 102 130 130 111 122 120 1 1 1 1 1 1 12781 5782 3307 5570 13314 15290 15290 1 EWEEAELQAK Unmodified 1231.5721 0.57208211 298 A0A1L1SS44;Q60709;Q06335 Aplp2 Amyloid-like protein 2 yes no 0 0 0 0 3.5 0.5 1 1 59.072 59.072 3 0.0113 20524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.683 34.608 20.244 28.427 0 20.767 0 20.254 19 28 0 19 0 19 1 1 0 1 0 1 1228.8 5783 298 5571 13315;13316 15291;15292 15292 2 EWEVVSVAEYHR Unmodified 1502.7154 0.7153923 2028 Q4KMM3 Oxr1 Oxidation resistance protein 1 yes yes 0 0 0 0 5 0 1 59.404 59.404 3 9.6191E-05 20481 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.165 51.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5784 2028 5572 13317 15293 15293 1 EWFFLLSK Unmodified 1068.5644 0.56441796 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 10 0 2 90.48 90.48 2 0.0096034 29697 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.802 0 0 29.315 28.537 0 18.538 60.913 0 28 28 0 19 59 0 1 1 0 1 2 3559.4 5785 844 5573 13318;13319 15294;15295 15295 2 EWFLEAAK Unmodified 992.49673 0.49673232 1316 P06745 Gpi Glucose-6-phosphate isomerase yes yes 0 0 0 0 8.57 2.06 1 1 2 2 1 72.07 72.07 2;3 0.0012438 25054 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 139.19 89.373 584.1 716.72 1106 955.82 999.21 629.43 550 728 1104 943 1006 606 3 6 6 5 5 4 207640 5786 1316 5574 13320;13321;13322;13323;13324;13325;13326 15296;15297;15298;15299;15300;15301;15302 15297 7 EWFTAHIIPFLK Unmodified 1500.8129 0.8129215 1268 O88531 Ppt1 Palmitoyl-protein thioesterase 1 yes yes 0 0 0 0 11.3 0.471 2 1 86.627 86.627 3;4 0.00013782 27437 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.171 57.379 98.402 0 40.034 0 85.17 47.979 93 0 37 0 83 46 2 0 1 0 2 1 11394 5787 1268 5575 13327;13328;13329 15303;15304;15305;15306;15307;15308 15303 6 EWHHFLVVNMK Unmodified 1438.718 0.71797526 1806 P70296;D3Z1V4;D6RHS6;E9QLE5;Q8VIN1 Pebp1;Pbp2 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide;Phosphatidylethanolamine-binding protein 2 yes no 0 0 0 0 10.7 1.7 1 1 1 61.223 61.223 4 0.0003653 16718 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.379 65.012 305.35 258.97 398.11 346.81 289.91 248.63 288 269 398 344 296 241 4 4 4 4 3 3 35388 5788 1806 5576 13330;13331;13332 15309;15310;15311;15312 15310 4 EWIECAHGIGGTR Unmodified 1484.683 0.68304632 2869 Q99LY9;B1ARW4 Ndufs5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5;NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed yes no 0 0 0 0 9 4 1 1 50.766 50.766 3 0.00013486 16565 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.386 49.005 88.053 121.41 83.29 0 218.31 161.13 83 121 83 0 214 157 1 2 1 0 2 2 12309 5789 2869 5577 13333;13334 15313;15314 15313 2 EWIPRPPEK Unmodified 1150.6135 0.61349341 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 1 8 0 1 54.966 54.966 3 0.040145 16271 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.79 30.21 127.99 0 129.19 0 112.81 95.919 120 0 120 0 111 93 1 0 1 0 1 1 10036 5790 1760 5578 13335 15315 15315 1 EWQELDDAEK Unmodified 1261.5463 0.54626129 2697 Q8VDM4;A0A338P6M5 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 3 0 2 59.437 59.437 2;3 0.00042074 20960 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.184 54.661 50.148 56.203 0 0 94.604 47.402 47 56 0 0 92 47 2 2 0 0 2 2 11357 5791 2697 5579 13336;13337 15316;15317 15316 2 EWSGLLEELAR Unmodified 1301.6616 0.66156582 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 13 0 1 85.036 85.036 2 0.0024097 33256 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.24 50.892 39.12 75.537 33.592 38.439 0 49.036 37 74 37 37 0 46 1 1 1 1 0 1 8816.6 5792 2507 5580 13338 15318 15318 1 EWTNEVFSLATNLLAQNMSR Unmodified 2323.1267 0.12668044 3373 Q9Z1B3;A0A0J9YUY5 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes no 0 0 0 0 11 0.816 1 1 1 107.95 107.95 3 3.651E-13 33920 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.96 95.27 5 7.448 9.738 5.465 9.414 0 5 7 9 5 9 0 1 1 1 1 1 0 7467.9 5793 3373 5581 13339;13340;13341 15319;15320;15321;15322 15319 4 EWVESMGGK Unmodified 1021.4539 0.45388123 2856 Q99L47;F8WJK8;E9Q1X9 St13 Hsc70-interacting protein yes no 0 0 0 0 7 0 1 59.05 59.05 3 0.001739 18803 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.827 35.287 29.59 36.615 45.345 46.711 45.97 0 28 37 46 46 46 0 1 1 1 1 1 0 2275.3 5794 2856 5582 13342 15323 15323 1 EWYQETHEK Unmodified 1248.5411 0.54111633 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4.5 0.5 1 1 44.038 44.038 3 0.00014407 13459 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.7 84.469 197.62 81.039 79.42 204.74 136.56 104.84 185 83 83 194 139 102 2 1 1 2 1 1 29862 5795 1382 5583 13343;13344 15324;15325 15324 2 EYACTAVDMISR Unmodified 1414.6221 0.62208554 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 6 0 1 61.085 61.085 2 0.021857 20608 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.567 17.188 39.31 36.131 35.057 58.618 26.595 0 37 37 37 56 28 0 1 1 1 1 1 0 2193.8 5796 2179 5584 13345 15326 15326 1 EYAEDDNIYQQK Unmodified 1514.6525 0.65251728 2293 Q7TQI3;D3YWF6;D3Z7K0 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 51.145 51.145 2;3 3.7739E-14 17244 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 133.07 105.1 574.55 397.03 663.13 180.58 512.41 462.72 541 417 645 185 513 447 4 3 4 1 4 3 92811 5797 2293 5585 13346;13347;13348;13349 15327;15328;15329;15330 15328 4 EYAENIGDGR Unmodified 1122.4942 0.49416614 2979 Q9CWL8 Ctnnbl1 Beta-catenin-like protein 1 yes yes 0 0 0 0 2 0 1 40.683 40.683 2 0.0011741 12114 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.239 60.95 20.155 13.071 27.877 34.408 0 34.112 19 14 28 33 0 32 1 1 1 1 0 1 4962 5798 2979 5586 13350 15331 15331 1 EYATEVDVDFVR Unmodified 1441.6725 0.67252444 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 4.83 3.72 1 2 2 1 65.503 65.503 2;3 2.1005E-18 23890 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 151.07 120.51 67.778 37.576 49.524 69.831 177.86 143.68 64 37 46 65 177 138 3 2 2 3 4 3 69930 5799 1203;3123 5587 13351;13352;13353;13354;13355;13356 15332;15333;15334;15335;15336;15337;15338;15339;15340 15335 9 EYCIQAFESFVR Unmodified 1547.7079 0.70786408 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6 0 1 78.412 78.412 3 0.04089 28698 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.189 21.935 0 19.914 18.048 29.528 0 9.594 0 19 19 28 0 9 0 1 1 1 0 1 1247 5800 2264 5588 13357 15341 15341 1 EYDDNGEGITIFRPLHLANK Deamidation (N) 2302.123 0.12297527 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 1 0 1 6 0 1 66.966 66.966 4 5.8372E-05 23476 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.007 38.323 59.741 0 58.292 44.859 103.38 36.492 56 0 56 46 102 37 1 0 1 1 1 1 6920.2 5801 1470 5589 13358 15342 15342 542 1 EYDPVEAR Unmodified 977.44543 0.44542503 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 2 0.707 1 2 1 41.404 41.404 2;3 0.01221 12577 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.308 53.739 206.04 153.18 227 66.767 84.521 175.61 194 157 222 65 83 167 3 2 3 1 1 2 54045 5802 722 5590 13359;13360;13361;13362 15343;15344;15345;15346 15345 4 EYDQALADLKK Unmodified 1292.6612 0.66123147 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 1 10 3 1 1 60.48 60.48 3 0.0038612 19738 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.375 38.139 147.55 163.36 261.63 181.05 295.52 229.29 139 167 259 185 298 223 1 2 2 2 2 2 13214 5803 2952 5591 13363;13364 15347;15348 15347 2 EYDSISR Unmodified 868.39266 0.39266118 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 2 0 1 36.707 36.707 2 0.015511 10279 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.1 61.646 0 48.187 45.262 36.349 74.123 46.921 0 46 46 37 74 46 0 1 1 1 1 1 6170.3 5804 3106 5592 13365 15349 15349 1 EYEATLEECCAK Unmodified 1501.6065 0.60649506 656 CON__P02769 yes yes 0 0 0 0 2.5 0.5 1 1 52.594 52.594 3 1.2971E-09 17368 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.43 73.257 0 0 54.401 17.525 0 35.178 0 0 51 19 0 33 0 0 1 1 0 1 12880 + 5805 656 5593 13366;13367 15350;15351 15350 2 EYEEDGSR Unmodified 983.38322 0.38321871 2672 Q8R5C5 Actr1b Beta-centractin yes yes 0 0 0 0 13 0 1 27.349 27.349 2 0.019116 5354 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.77 55.841 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1654.1 5806 2672 5594 13368 15352 15352 1 EYEEEIHSLK Unmodified 1275.5983 0.59829686 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8;A0A0J9YV63;A0A0J9YUZ2 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 4 0 1 52.153 52.153 3 0.042283 17267 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.589 18.115 69.745 0 0 50.278 0 59.696 65 0 0 46 0 56 1 0 0 1 0 1 5328.6 5807 992 5595 13369 15353 15353 1 EYFGGFGEVESIELPMDNK Unmodified 2159.9721 0.97213685 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;F6SHF3 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 5 0 1 87.088 87.088 3 8.3282E-08 33244 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.814 81.505 0 0 20.558 0 19.564 9.0357 0 0 19 0 19 9 0 0 1 0 1 1 3225.4 5808 2079 5596 13370 15354 15354 1 EYFGQFGEIEAIELPIDPK Unmodified 2194.0834 0.083401864 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 5.5 0.5 1 1 93.336 93.336 3 6.0825E-08 35008 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.169 74.607 12.725 20.965 57.106 0 9.414 12.792 12 21 54 0 9 12 1 2 3 0 1 1 5841.6 5809 1906 5597 13371;13372 15355;15356;15357 15355 3 EYFQHAR Unmodified 949.44061 0.44061443 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 13 0 1 31.659 31.659 3 0.038523 7375 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.351 30.571 68.714 92.735 94.716 0 65.015 86.623 65 93 93 0 65 83 1 1 1 0 1 1 9197.4 5810 2582 5598 13373 15358 15358 1 EYFSWEGTFQHVGK Unmodified 1713.7787 0.77872084 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 10.5 2.5 1 1 68.754 68.754 3 1.0273E-05 25271 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105 84.634 0 77.475 151.73 84.414 159.4 57.813 0 74 148 83 158 56 0 1 2 1 2 1 19190 5811 3094 5599 13374;13375 15359;15360 15360 2 EYGGHQK Unmodified 817.37187 0.37186616 3144 Q9DCJ1 Mlst8 Target of rapamycin complex subunit LST8 yes yes 0 0 0 0 5 0 1 27.131 27.131 3 0.056357 5148 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.067 19.542 49.014 0 57.873 55.498 62.097 97.366 46 0 56 55 65 93 1 0 1 1 1 1 1709.3 5812 3144 5600 13376 15361 15361 1 EYGGLDVLVNNAGIAFK Unmodified 1778.9203 0.9202997 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 86.498 86.498 3;4 7.5372E-06 31143 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.932 61.784 29.952 115.87 76.57 59.994 122.5 174.2 28 112 74 56 121 168 1 3 1 2 3 4 24410 5813 1582 5601 13377;13378;13379;13380 15362;15363;15364;15365;15366 15364 5 EYGSGSSR Unmodified 841.35661 0.35661003 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 3 0 1 21.899 21.899 2 0.0046104 3761 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.18 74.948 29.626 0 70.181 0 0 49.036 28 0 65 0 0 46 1 0 1 0 0 1 3340.7 5814 1472 5602 13381 15367 15367 1 EYHSVGVQVEDEKR Unmodified 1673.8009 0.80091285 1897 Q0VF59;Q8BJ42 Dlgap2 Disks large-associated protein 2 yes no 0 0 0 1 4 0 1 40.54 40.54 4 0.043854 11791 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 33.796 18.765 49.176 36.052 0 0 38.702 0 46 37 0 0 37 0 1 1 0 0 1 0 3353.3 5815 1897 5603 13382 15368 15368 1 EYIEIITSSIK Unmodified 1294.702 0.70203365 2746 Q91VR8 Brk1 Protein BRICK1 yes yes 0 0 0 0 8.86 1.96 2 2 1 1 1 81.658 81.658 2;3 1.6545E-08 28769 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.97 51.096 296.32 110.47 346.39 156.64 257.99 270.63 278 111 334 158 260 260 5 2 5 4 4 3 52990 5816 2746 5604 13383;13384;13385;13386;13387;13388;13389 15369;15370;15371;15372;15373;15374;15375 15372 7 EYISDDHER Unmodified 1162.4891 0.48908076 1257 O70481 Ubr1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 0 1 0 1 31.249 31.249 3 0.00022596 7369 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.309 83.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5817 1257 5605 13390 15376 15376 1 EYKPLIIYNAIDSLTR Unmodified 1908.0357 0.03566381 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 1 11.5 1.12 1 1 1 1 84.436 84.436 3 2.4291E-05 26502 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.378 62.513 0 56 30.296 155.88 29.288 49.036 0 56 28 149 28 46 0 1 1 3 1 1 14589 5818 1255 5606 13391;13392;13393;13394 15377;15378;15379;15380;15381;15382 15380 6 EYLFQAK Unmodified 897.45962 0.45961853 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.5 0.5 1 1 59.981 59.981 2 0.026973 17838 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.55 43.668 0 207.48 0 231.18 86.654 136.11 0 195 0 213 93 130 0 2 0 2 1 1 16839 5819 2186 5607 13395;13396 15383;15384 15384 2 EYLLQYNDPK Unmodified 1281.6241 0.62411768 2920 Q9CQC7 Ndufb4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 0 0 0 0 7 0 1 62.244 62.244 3 0.019748 20279 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.466 15.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5820 2920 5608 13397 15385 15385 1 EYLPIGGLAEFCK Unmodified 1495.7381 0.73810158 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 81.244 81.244 3 1.9383E-07 29269 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.84 80.038 49.176 36.052 47.737 86.114 93.588 76.213 46 37 46 83 93 74 1 1 1 2 1 2 13329 5821 1312 5609 13398;13399 15386;15387 15386 2 EYLQTHWEEEECQQDVSLLR Unmodified 2591.1598 0.15983106 2374 Q8BGB7 Enoph1 Enolase-phosphatase E1 yes yes 0 0 0 0 3.5 0.5 1 1 66.552 66.552 3 1.1017E-07 23818 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.763 60.944 9.5993 0 9.6896 0 37 0 9 0 9 0 37 0 1 0 1 0 1 0 5196.5 5822 2374 5610 13400;13401 15388;15389 15389 2 EYLTSHLEIR Unmodified 1259.651 0.65100113 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 6 0 1 53.097 53.097 3 8.2516E-06 16812 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.04 90.786 59.552 54.839 43.639 57.079 81.237 86.16 56 56 46 56 83 83 1 1 1 1 1 1 4704.6 5823 513 5611 13402 15390 15390 1 EYPGAHTATIK Unmodified 1186.5982 0.59823728 1104 G5E8H1 Gria2 no no 0 0 0 0 6 0 1 40.991 40.991 3 0.017208 11117 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.915 19.401 73.34 57.753 68.278 57.139 0 99.138 69 60 69 56 0 93 1 1 1 1 0 1 11454 5824 1104 5612 13403 15391 15391 1 EYQAGDFEAAER Unmodified 1384.5895 0.58952309 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 2.5 0.5 1 1 48.14 48.14 3 9.8515E-05 15362 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.734 57.845 9.4617 38.73 0 20.767 0 0 9 37 0 19 0 0 1 1 0 1 0 0 12029 5825 2543 5613 13404;13405 15392;15393 15392 2 EYQDAFLFNELK Unmodified 1515.7246 0.72456001 3320 Q9WTM5;A0A1B0GR89 Ruvbl2 RuvB-like 2 yes no 0 0 0 0 6 0 1 80.25 80.25 3 0.049333 29619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.445 16.064 49.358 0 0 0 29.288 0 46 0 0 0 28 0 1 0 0 0 1 0 1682.2 5826 3320 5614 13406 15394 15394 1 EYQDLLNVK Unmodified 1120.5764 0.57643921 154;1557;1329;1423;1415;1493 P19246;P20152;A0A0A6YWC8;P46660;A0A0R4J036;P08553;D3YZ35;P08551;P31001 Nefh;Vim;Ina;Nefm;Nefl;Des Neurofilament heavy polypeptide;Vimentin;Alpha-internexin;Neurofilament medium polypeptide;Neurofilament light polypeptide;Desmin no no 0 0 0 0 8 2.58 1 1 1 1 1 1 66.138 66.138 3 6.81E-06 22863 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.63 40.304 585.57 732.38 735.69 649.07 718.07 670.23 551 737 750 640 737 644 6 8 8 7 8 6 370900 5827 1415;1423;1557;154;1329;1493 5615 13407;13408;13409;13410;13411;13412 15395;15396;15397;15398;15399;15400;15401;15402;15403 15396 9 EYQLNDSAAYYLNDLDR Deamidation (N) 2062.912 0.91197944 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 1 0 0 5.2 3.92 3 1 1 76.599 76.599 3 2.1974E-12 29573 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.14 107.25 29.952 67.401 68.591 0 67.362 78.595 28 66 65 0 66 75 1 3 2 0 3 3 13440 5828 622 5616 13413;13414;13415;13416;13417 15404;15405;15406;15407;15408 15406 180;181 5 EYQLNDSAAYYLNDLDR Unmodified 2061.928 0.92796385 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 74.729 74.729 2;3 7.3294E-08 27548 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.44 88.888 59.808 75.767 20.558 80.956 83.468 67.744 56 75 19 75 84 65 1 2 1 2 3 2 25815 5829 622 5616 13418;13419;13420;13421 15409;15410;15411;15412;15413 15411 5 EYQLNDSAAYYLNDLER Unmodified 2075.9436 0.94361392 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 6.67 4.5 1 1 1 75.439 75.439 3 1.6216E-08 28028 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.72 85.417 29.33 19.892 76.712 46.233 63.879 78.127 28 19 74 46 65 75 2 1 3 1 1 2 28214 5830 1330 5617 13422;13423;13424 15414;15415;15416;15417 15416 4 EYQLNDSAK Unmodified 1066.4931 0.49310351 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 6 3.27 1 1 2 1 1 45.655 45.655 2;3 0.00026261 13326 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.26 79.269 776.76 355.97 765.89 634.3 1281 1446.8 728 370 742 634 1300 1390 5 2 5 5 7 6 275530 5831 1411 5618 13425;13426;13427;13428;13429;13430 15418;15419;15420;15421;15422;15423;15424 15423 7 EYQLNDSAK Deamidation (N) 1067.4771 0.47711909 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 1 0 0 3.75 0.433 1 3 48.641 48.641 2;3 0.0028954 16201 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.807 50.393 59.803 154.26 240 286.96 195.59 319.55 56 148 240 279 203 305 1 2 3 4 3 4 41379 5832 1411 5618 13431;13432;13433;13434 15425;15426;15427;15428 15425 510 4 EYQLNDSASYYLNDLDR Unmodified 2077.9229 0.92287848 3136 Q9DC51 Gnai3 Guanine nucleotide-binding protein G(k) subunit alpha yes yes 0 0 0 0 3.5 0.5 1 1 72.69 72.69 3 4.0648E-07 26563 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.676 64.99 9.657 0 0 40.441 19.197 19.706 9 0 0 37 19 19 1 0 0 1 1 1 4823.3 5833 3136 5619 13435;13436 15429;15430 15430 2 EYQLSDSTK Unmodified 1069.4928 0.49276916 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 7.33 4.03 1 1 1 46.353 46.353 3 8.7383E-05 14297 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.7 71.632 255.57 224.31 317.59 190.55 136.07 322.31 241 232 315 194 139 306 3 3 3 3 1 3 25959 5834 1428 5620 13437;13438;13439 15431;15432;15433 15432 3 EYQPHVIVSTTGPNPFNTLTDR Unmodified 2485.2238 0.22375194 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 0 7 0 1 67.251 67.251 4 0.024275 22656 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.282 22.186 29.702 36.927 26.199 38.88 0 0 28 37 28 37 0 0 1 1 1 1 0 0 2962.7 5835 3276 5621 13440 15434 15434 1 EYQWIGLNDR Unmodified 1292.6149 0.61494998 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 7.75 3.11 1 1 1 1 63.959 63.959 2 2.1476E-08 21861 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.75 105.73 198.6 237.27 26.386 287.25 276.2 193.6 186 236 28 269 277 185 2 3 1 4 3 3 62769 5836 2125 5622 13441;13442;13443;13444 15435;15436;15437;15438 15436 4 EYQYGDDQGIDY Unmodified 1464.5681 0.56811894 84 A0A0G2JDV8;Q9DAW9 Cnn3 Calponin-3 yes no 0 0 0 0 2 0.816 1 1 1 62.458 62.458 2 9.0725E-05 20764 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.309 80.54 0 0 0 20.246 46.69 19.464 0 0 0 19 47 19 0 0 0 1 2 1 9704.3 5837 84 5623 13445;13446;13447 15439;15440;15441 15439 3 EYRPCDPQLVSER Unmodified 1647.7675 0.76750423 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 8.5 4.5 1 1 43.01 43.01 3 2.2727E-07 13121 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.76 74.752 157.21 121.08 165.29 140.68 73.968 0 148 120 166 139 74 0 2 1 2 2 1 0 21977 5838 2186 5624 13448;13449 15442;15443 15442 2 EYSPAATTAENGGGK Deamidation (N) 1452.6369 0.63686721 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 1 0 0 5.4 3.83 2 2 1 43.842 43.842 3 3.9418E-22 13891 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 138.77 115.35 544.01 358.1 516.78 314.02 481.97 539.5 511 371 509 315 490 519 5 5 5 4 5 6 75526 5839 2253 5625 13450;13451;13452;13453;13454 15444;15445;15446;15447;15448;15449 15446 893 6 EYTLDVYR Unmodified 1057.508 0.50802529 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 4 0 1 55.819 55.819 2 0.035339 19085 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.598 41.2 49.186 0 28.832 27.287 85.01 46.61 46 0 28 28 84 46 1 0 1 1 1 1 2582.7 5840 432 5626 13455 15450 15450 1 FAAATGATPIAGR Unmodified 1202.6408 0.6407708 1374 P14206;A0A1L1SRW0 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 10.5 2.5 1 1 51.87 51.87 2 6.6004E-11 14829 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.9 89.578 88.34 350.26 522.41 372.68 506.34 472.71 83 343 518 374 514 457 1 3 3 2 2 3 35419 5841 1374 5627 13456;13457 15451;15452;15453 15451 3 FAAAYCR Unmodified 857.38541 0.38540773 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 9 0.816 1 1 1 44.338 44.338 2 0.005885 11278 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 139.01 96.888 270.34 270.9 315.48 538.82 222.19 598.08 254 259 303 514 238 567 2 2 1 3 2 3 92751 5842 1520 5628 13458;13459;13460 15454;15455;15456 15454 3 FAADAIK Unmodified 734.39629 0.39629 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 9.33 2.62 1 1 1 54.903 54.903 2;3 0.021996 18352 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.906 30.945 157.9 146.35 28.508 182.53 29.288 187.62 148 148 28 167 28 176 2 2 1 1 1 1 15928 5843 246 5629 13461;13462;13463 15457;15458;15459 15459 3 FAAFIDK Unmodified 810.42759 0.42759012 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Krt86;5430421N21Rik;Krt81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 no no 0 0 0 0 10 0 1 69.98 69.98 2 0.027669 20478 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.071 27.681 207.84 116.22 135.97 143.82 0 3009.3 195 120 139 139 0 2823 2 1 2 2 0 2 41169 + 5844 648 5630 13464 15460;15461 15460 2 FAANPNQNK Unmodified 1002.4883 0.4882929 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 41.555 41.555 2 0.0011864 9923 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.04 48.381 39.701 29.017 46.353 37.678 36.688 58.649 37 28 46 37 37 56 1 1 1 1 1 1 5809.1 5845 1812 5631 13465;13466 15462;15463 15462 2 FAAPAQPEEER Unmodified 1243.5833 0.5833155 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 6.17 3.24 1 1 1 2 1 44.886 44.886 2;3 2.2172E-16 13559 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 167.67 116.24 180.51 157.2 322.31 207.78 257.12 157.92 170 157 316 204 256 152 4 3 6 4 4 4 72372 5846 1424 5632 13467;13468;13469;13470;13471;13472 15464;15465;15466;15467;15468;15469 15469 6 FAASNFGK Unmodified 840.413 0.41300269 1121 H3BJZ7;Q4KUS2;E9Q263;A0A140LJ69;Q9Z1N9;A0A140LHX5 Unc13a;Unc13b Protein unc-13 homolog A;Protein unc-13 homolog B yes no 0 0 0 0 10 0 1 55.765 55.765 2 0.004198 14067 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.29 47.576 0 93.632 0 86.347 0 99.138 0 88 0 79 0 93 0 1 0 1 0 1 7945.3 5847 1121 5633 13473 15470 15470 1 FAAVGFHR Unmodified 903.47152 0.47152062 3169 Q9EQ06;A8Y5N4;Q8VCR2 Hsd17b11;Hsd17b13 Estradiol 17-beta-dehydrogenase 11;17-beta-hydroxysteroid dehydrogenase 13 yes no 0 0 0 0 10 0 1 47.059 47.059 3 0.015998 10563 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.281 50.457 0 29.792 0 30.604 0 49.036 0 28 0 28 0 46 0 1 0 1 0 1 3217.3 5848 3169 5634 13474 15471 15471 1 FAAYFQQGDMESNGK Deamidation (N) 1692.709 0.7089863 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 1 0 0 8.5 2.69 1 1 1 1 70.18 70.18 3 1.2587E-07 23559 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.619 54.837 88.542 161.4 103.55 223.07 189.53 172.61 83 158 102 213 195 167 1 2 2 3 2 2 25657 5849 1316 5635 13475;13476;13477;13478 15472;15473;15474;15475 15474 383 4 FAAYFQQGDMESNGK Unmodified 1691.725 0.72497071 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 7 0 1 70.625 70.625 3 1.7384E-05 24220 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.728 64.583 59.481 43.848 64.894 56.249 58.036 62.304 56 46 65 56 60 60 1 1 1 1 1 1 6644.9 5850 1316 5635 13479 15476 15476 1 FACHSASLTVR Unmodified 1247.6081 0.60809046 2839 Q99K48 Nono Non-POU domain-containing octamer-binding protein yes yes 0 0 0 0 9 0 1 41.457 41.457 3 0.012829 9429 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.442 28.665 0 215.26 170.91 148.38 228.26 190.7 0 205 176 149 231 185 0 1 1 1 1 1 5862.6 5851 2839 5636 13480 15477 15477 1 FADDTYTESYISTIGVDFK Unmodified 2170.9946 0.99464644 1742;2065;3040 P62821;Q5SW88;Q5SW86;Q9D1G1 Rab1A;Rab1;Rab1b Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 0 7.75 3.11 1 1 1 1 87.848 87.848 3 1.2776E-07 34564 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.16 69.879 128.22 56.176 43.476 57.145 133.87 57.495 120 60 42 55 131 56 4 3 3 3 3 3 18507 5852 1742;2065;3040 5637 13481;13482;13483;13484 15478;15479;15480;15481;15482 15482 5 FADGDVDAVLSR Unmodified 1263.6095 0.60953025 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 4 0 1 65.537 65.537 2 5.9249E-05 23313 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.113 64.692 0 0 40.034 0 38.702 0 0 0 37 0 37 0 0 0 1 0 1 0 6699.5 5853 2633 5638 13485 15483 15483 1 FADILPLGVPHK Unmodified 1305.7445 0.74450759 3240 Q9JKY7;A0A2R8VKC7 Cyp2d22 yes no 0 0 0 0 10 0 1 75.307 75.307 3 0.015292 22766 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.288 28.508 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5854 3240 5639 13486 15484 15484 1 FADLSEAANR Unmodified 1092.52 0.51998696 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 5 0 1 54.171 54.171 2 1.2935E-05 17934 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.31 97.19 87.913 80.301 124.58 0 93.965 96.457 83 83 120 0 93 93 1 1 1 0 1 1 8438.4 5855 1423 5640 13487 15485 15485 1 FADLTDAASR Unmodified 1065.5091 0.50908792 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 9.5 3.5 1 1 57.03 57.03 2 3.9256E-07 18719 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.69 91.359 459.92 378.26 467.62 502.87 488.99 226.24 433 392 476 494 497 219 2 2 2 2 2 1 107760 5856 1304 5641 13488;13489 15486;15487 15486 2 FADVLGLEEETLGSVPSPACALLLLFPLTAQHENFR Unmodified 3954.0237 0.0237255 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 119.66 119.66 4 4.7241E-05 45329 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.512 29.082 0 2.0758 3.1215 5 0 4.264 0 2 3 5 0 4 0 1 1 1 0 1 22105 5857 3302 5642 13490;13491;13492;13493 15488;15489;15490;15491;15492;15493 15493 6 FAEAFEAIPR Unmodified 1149.5819 0.58185893 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 9.5 3.5 1 1 71.378 71.378 2 8.5152E-05 25587 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.4 78.794 256.18 78.489 338.5 136.08 274.96 278.91 241 83 324 139 278 269 3 1 3 2 3 3 25395 5858 1543 5643 13494;13495 15494;15495;15496 15495 3 FAEDMGIPQVPVEK Unmodified 1558.7701 0.77012999 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 5.5 0.5 1 1 75.373 75.373 3 0.0014265 27941 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.599 32.613 118.07 72.362 112.4 62.057 121.7 28.269 111 74 111 65 120 28 2 1 2 2 2 1 10075 5859 2487 5644 13496;13497 15497;15498 15497 2 FAEELEWER Unmodified 1207.551 0.55095274 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 4 0 1 67.115 67.115 2 0.0029259 24114 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.838 60.883 0 38.451 54.827 77.614 0 0 0 37 56 74 0 0 0 1 1 1 0 0 6863.9 5860 3285 5645 13498 15499 15499 1 FAEFLLPLLIEK Unmodified 1431.8377 0.83773927 832 E9PW47;F7C9N6;Q9D071 Mms19 MMS19 nucleotide excision repair protein homolog yes no 0 0 0 0 11.3 1.25 1 1 1 108.36 108.36 3 0.0017319 33957 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.802 42.829 5.365 0 6.0745 19.208 5.5215 24.36 5 0 6 18 6 23 1 0 1 2 1 2 2513.4 5861 832 5646 13499;13500;13501 15500;15501;15502 15500 3 FAEFQYLQPGPPR Unmodified 1548.7725 0.77251325 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 8 0 1 72.229 72.229 2 0.008669 24356 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.223 31.781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5862 2701 5647 13502 15503 15503 1 FAEHVFR Unmodified 904.45554 0.45553621 1832;1734;2763 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5;Q91X97;D3YVA2;D3Z2Z8;D3Z1M0 Hpcal1;Hpca;Ncald Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 0 8.6 2.42 1 1 1 1 1 45.462 45.462 3 0.0016838 12593 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.2 73.905 424.3 457.92 501.39 274.74 149.5 684.37 399 462 496 264 148 646 5 5 5 2 3 6 282940 5863 1734;1832;2763 5648 13503;13504;13505;13506;13507 15504;15505;15506;15507;15508;15509;15510 15505 7 FAEIIEK Unmodified 848.46437 0.46436956 2904 Q9CPY7;A0A0G2JEM7 Lap3 Cytosol aminopeptidase yes no 0 0 0 0 6.5 0.5 1 1 66.084 66.084 2 0.034519 22060 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.671 25.112 138.58 0 152.75 150.05 138.5 0 130 0 148 148 139 0 1 0 1 1 1 0 8931.4 5864 2904 5649 13508;13509 15511;15512 15512 2 FAELAQIYAQR Unmodified 1308.6826 0.68263561 3206 Q9JHW2;A0A338P7A1;A0A338P6G0 Nit2 Omega-amidase NIT2 yes no 0 0 0 0 9 0 1 73.157 73.157 2 0.0010554 24134 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.171 66.679 39.564 27.124 0 0 48.116 0 37 28 0 0 46 0 1 1 0 0 1 0 5128 5865 3206 5650 13510 15513 15513 1 FAELQSPNK Unmodified 1032.524 0.52400971 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 9.33 2.62 1 1 1 54.976 54.976 2;3 0.0059192 16935 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.95 40.762 127.47 101.85 216.31 141.82 172.26 154.93 120 102 212 139 176 149 2 1 3 2 3 2 14061 5866 3038 5651 13511;13512;13513 15514;15515;15516 15514 3 FAELVYTGFWHSPECEFVR Unmodified 2373.0888 0.088838367 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 8 0 1 85.454 85.454 3 2.1655E-05 30628 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.564 44.442 39.292 18.848 0 39.22 64.897 37.59 38 19 0 37 65 37 2 1 0 1 1 1 3233.7 5867 1393 5652 13514 15517;15518 15517 2 FAEPIGGFQCVFPGC Unmodified 1684.7378 0.737784 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 0 7.33 0.471 2 1 93.754 93.754 2;3 3.6807E-05 34655 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.241 63.33 5.333 9.576 5.3831 0 0 14.924 5 9 5 0 0 14 1 1 1 0 0 2 6211.6 5868 2465 5653 13515;13516;13517 15519;15520;15521 15519 3 FAEQVEVAIEALSANVPQPFEENEFIDASR Unmodified 3348.615 0.61501614 799 E0CXB9;Q61301 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 13 0 1 114.12 114.12 4 1.5438E-05 44792 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.916 37.151 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 1417.9 5869 799 5654 13518 15522 15522 1 FAESQPK Unmodified 805.39702 0.39701828 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 6.5 0.5 1 1 42.094 42.094 2;3 0.037999 11645 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.525 33.624 78.478 102.09 68.763 107.39 0 59.696 74 102 74 102 0 56 1 1 1 1 0 1 5929.8 5870 3094 5655 13519;13520 15523;15524 15523 2 FAEWCLDYGEHGCR Unmodified 1798.7192 0.71917383 1292 O89112 Lancl1 LanC-like protein 1 yes yes 0 0 0 0 6 0 1 62.555 62.555 3 6.3923E-05 21338 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.769 71.803 29.749 0 49.622 0 0 0 28 0 46 0 0 0 1 0 1 0 0 0 4042.5 5871 1292 5656 13521 15525 15525 1 FAFDYATK Unmodified 961.45453 0.45453316 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 66.293 66.293 2 0.005525 24088 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.94 71.954 1018.2 291.11 1354.1 234.35 1346.6 1319.7 956 306 1282 241 1341 1274 3 2 4 2 4 4 124200 5872 2734 5657 13522;13523;13524;13525 15526;15527;15528;15529 15529 4 FAFQAEVNR Unmodified 1080.5352 0.53524309 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 13 0 1 56.829 56.829 2 0.022207 19595 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.076 46.112 138.18 116.32 122.16 0 145.39 0 130 120 120 0 139 0 1 1 1 0 1 0 10492 5873 1324 5658 13526 15530 15530 1 FAGHNFR Deamidation (N) 848.39294 0.39293595 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 1 0 0 6 0 1 41.205 41.205 3 0.01782 11258 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.935 72.153 0 0 0 40.441 0 59.696 0 0 0 37 0 56 0 0 0 1 0 1 4702.6 5874 1399 5659 13527 15531 15531 489 1 FAGHNFR Unmodified 847.40892 0.40892037 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 35.254 35.254 2;3 0.0042377 6186 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.22 75.907 1555.1 1779.7 1722.5 1750.6 2668 2237.9 1464 1796 1770 1737 2701 2157 3 4 5 5 6 4 330050 5875 1399 5659 13528;13529;13530;13531;13532;13533 15532;15533;15534;15535;15536;15537;15538 15535 7 FAGQMGIQLFETSAK Unmodified 1626.8076 0.80757813 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 9.5 0.5 1 1 80.813 80.813 3 0.00074488 27676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.261 29.933 0 0 318.8 251.69 135.9 242.37 0 0 305 250 139 231 0 0 2 2 1 2 27486 5876 2250 5660 13534;13535 15539;15540 15539 2 FAGYIDK Unmodified 812.40685 0.40685468 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 8.5 0.5 1 1 59.35 59.35 2 0.021458 18374 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.39 54.425 517.54 373.41 525.07 427.57 591.28 576.89 487 392 526 430 603 557 2 2 2 2 2 2 38014 5877 1415 5661 13536;13537 15541;15542 15541 2 FAGYIEK Unmodified 826.4225 0.42250475 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 9.33 2.62 1 1 1 59.202 59.202 2;3 0.027285 18274 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.925 35.821 543.28 234.67 464.91 271.87 459.78 429.27 510 247 456 282 463 415 3 1 2 2 2 3 91445 5878 154 5662 13538;13539;13540 15543;15544;15545 15544 3 FAHTNIESLVK Unmodified 1257.6717 0.67173657 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 8 0 1 59.031 59.031 3 3.1129E-08 18158 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.16 80.873 117.6 117.2 152.51 0 165.27 0 111 120 148 0 158 0 1 1 1 0 1 0 19855 5879 1470 5663 13541 15546 15546 1 FAIDDHDYLVSLTR Unmodified 1663.8206 0.82058566 2768 Q91XU3 Pip4k2c Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 0 6.5 0.5 1 1 72.868 72.868 3 0.0019435 26131 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.254 37.693 78.672 42.187 235.02 50.655 212.88 220.98 74 46 222 56 213 213 1 1 2 1 2 2 13130 5880 2768 5664 13542;13543 15547;15548 15547 2 FAIHGDPK Unmodified 883.4552 0.45520186 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 8 0.816 1 1 1 44.349 44.349 3 0.0040307 11232 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.923 37.855 177.52 222.36 176.07 205.82 499.65 130.59 167 223 176 204 491 130 1 2 1 2 3 1 29640 5881 2963 5665 13544;13545;13546 15549;15550;15551 15550 3 FAILTEK Unmodified 820.46945 0.46945494 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 11 2 1 1 67.166 67.166 2 0.026917 24516 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.942 50.704 118.9 186.05 165.66 211.28 96.467 392.73 111 185 167 204 102 371 1 2 1 2 1 2 21048 5882 2244 5666 13547;13548 15552;15553 15553 2 FAIQDISVEETSAK Unmodified 1536.7672 0.7671531 418;310;3209 A1BN54;Q7TPR4;O88990;A0A1L1SV25;P57780;D3Z0L8;D3Z761;Q9JI91 Actn1;Actn3;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 0 8 3.56 1 1 1 70.31 70.31 2;3 7.4767E-21 26019 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.56 102.23 48.876 104.28 167.76 194.72 167.2 137.04 46 103 167 186 168 130 1 3 4 4 4 3 20547 5883 418;310;3209 5667 13549;13550;13551 15554;15555;15556;15557;15558;15559 15559 6 FAISELFAK Unmodified 1024.5593 0.55933258 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 11.5 1.12 1 1 1 1 84.793 84.793 2 0.00019007 23631 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.06 94.041 139.32 93.267 59.439 77.411 116.45 298.28 130 93 56 72 116 288 3 3 1 2 3 4 70662 5884 1333 5668 13552;13553;13554;13555 15560;15561;15562;15563;15564;15565;15566 15565 7 FAISENPLITLR Unmodified 1372.7715 0.77145062 685 Q9R1V6;D3YUP9;D3YUQ0 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 11 2 1 1 79.774 79.774 3 0.0029802 27195 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.034 37.143 0 19.751 27.837 28.596 18.56 0 0 19 28 28 19 0 0 1 1 1 1 0 7580.3 5885 685 5669 13556;13557 15567;15568 15567 2 FALAQAQK Unmodified 875.4865 0.48650199 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 10.5 0.5 1 1 54.375 54.375 2 0.00058736 13512 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 151.17 86.307 219.4 304.6 306.39 201.95 384.26 388.78 207 305 294 187 389 375 1 2 1 1 2 2 25767 5886 3012 5670 13558;13559 15569;15570 15569 2 FALEVAAK Unmodified 847.48035 0.48035398 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F7ANF4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10 2.16 1 1 1 64.582 64.582 2 0.0058971 23093 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.81 48.09 278.44 106.71 0 0 0 237.72 260 111 0 0 0 223 2 1 0 0 0 2 29951 5887 1899 5671 13560;13561;13562 15571;15572;15573 15573 3 FALITWIGEDVSGLQR Unmodified 1803.9519 0.95193418 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 0 11 1.41 1 1 1 1 1 98.989 98.989 2;3 1.2531E-24 32311 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.73 119.43 31.715 14.861 33.682 102.66 51.703 46.967 31 15 34 100 51 46 2 1 2 6 2 3 108400 5888 2931 5672 13563;13564;13565;13566;13567 15574;15575;15576;15577;15578;15579;15580;15581;15582;15583 15575 10 FALMAQK Unmodified 807.4313 0.43129529 2567 Q8JZN5;A0A0G2JF25 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 0 12 0 1 62.421 62.421 2 0.020711 15048 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.29 64.784 0 48.944 0 48.343 102.89 46.1 0 46 0 46 102 46 0 1 0 1 1 1 3878.4 5889 2567 5673 13568 15584 15584 1 FALSQLTEPPK Unmodified 1229.6656 0.66558856 2286 Q7TNB5;P23818 Gria1 Glutamate receptor 1 yes no 0 0 0 0 9.5 0.5 1 1 70.926 70.926 3 1.3042E-08 23098 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.55 75.006 69.052 63.455 62.738 77.143 0 69.29 65 65 65 74 0 65 1 1 1 1 0 1 12415 5890 2286 5674 13569;13570 15585;15586 15585 2 FAMEPEEFDSDTLR Unmodified 1685.7243 0.72430201 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 3 0 1 72.232 72.232 3 0.038244 26924 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.657 22.89 0 0 19.685 19.594 0 9.594 0 0 19 19 0 9 0 0 1 1 0 1 1129.6 5891 193 5675 13571 15587 15587 1 FANIEEDTPSYHR Unmodified 1577.711 0.71103521 2263;276 Q6ZQ18;A0A1W2P7T9;Q8BWC5;A0A1D5RLL3;Q8BG67 Efr3b;Efr3a Protein EFR3 homolog B;Protein EFR3 homolog A no no 0 0 0 0 4 0 1 51.422 51.422 3 0.00066579 16978 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.092 51.062 39.516 36.703 0 40.441 0 39.442 37 37 0 37 0 37 1 1 0 1 0 1 4169.7 5892 2263;276 5676 13572 15588 15588 1 FANLNEQAAR Unmodified 1132.5625 0.56252048 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 8.57 2.87 2 2 1 2 47.124 47.124 2;3 5.4768E-21 14642 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.4 137.44 733.33 307.63 419.96 376.75 681.3 308 687 324 418 371 678 296 7 5 6 6 8 4 146390 5893 1557 5677 13573;13574;13575;13576;13577;13578;13579 15589;15590;15591;15592;15593;15594;15595;15596 15595 8 FANNPSQK Unmodified 904.44028 0.44028008 436 Q61701;A2A9S2;A2A9S0;Q8BVA9;A2A9R6;A2A9R8;A2A9S3;B1AXZ0;Q80UJ0;Q3UR02;B1AXZ5;Q80Y51;B1AXZ6;Q60899;B1AXZ4;A0A1L1SS95;Q60900;A0A1L1SUG6 Elavl4;Elavl2;Elavl3 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 3 yes no 0 0 0 0 8.5 0.5 1 1 40.44 40.44 2 0.0011866 9368 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.83 75.043 59.421 43.682 75.107 45.802 0 0 56 46 74 46 0 0 1 1 1 1 0 0 5276.5 5894 436 5678 13580;13581 15597;15598 15597 2 FANSLVGVQQQLQAFNTYR Unmodified 2183.1124 0.112351 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 83.846 83.846 3 1.1503E-57 26592 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 172.6 159.63 103.79 46.934 9.6896 81.416 74.152 174.84 97 46 9 75 78 166 5 1 1 3 4 7 262770 5895 2148 5679 13582;13583;13584;13585;13586 15599;15600;15601;15602;15603;15604;15605 15600 7 FANSLVGVQQQLQAFNTYR Deamidation (N) 2184.0964 0.096366586 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 10 2.16 1 1 1 84.8 84.8 3 1.3423E-07 29452 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.878 72.22 69.432 16.26 58.984 8.6347 66.342 47.979 65 19 56 9 65 46 2 1 2 1 2 1 13957 5896 2148 5679 13587;13588;13589 15606;15607;15608;15609 15607 839 4 FANYIDK Unmodified 869.42832 0.42831841 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 8.5 0.5 1 1 60.183 60.183 2 0.012187 17881 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.833 26.682 188.57 278.08 171.46 127.08 254.63 243.24 178 276 180 130 257 235 1 1 1 1 1 1 29579 5897 1423 5680 13590;13591 15610;15611 15611 2 FAPDFLFTPVDASLPAPQGR Unmodified 2145.0895 0.089490294 2761 Q91WU5 As3mt Arsenite methyltransferase yes yes 0 0 0 0 9 0 1 92.578 92.578 3 3.6261E-05 32906 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.19 39.152 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 2977.5 5898 2761 5681 13592 15612 15612 1 FAPNHTK Unmodified 813.41334 0.41333704 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YCY8 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 10 2.16 1 1 1 33.5 33.5 3 0.0067603 8175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 55.23 635.25 535.16 622.03 545.8 921.35 676.2 598 553 630 545 927 659 3 3 3 2 3 3 68494 5899 369;3345 5682 13593;13594;13595 15613;15614;15615 15615 3 FAPNQTR Unmodified 832.41915 0.4191507 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 9.33 2.62 1 1 1 34.52 34.52 2 0.012751 7422 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.18 53.875 227.1 354.35 290.92 421.41 440.65 372.25 213 352 297 409 452 361 2 3 2 3 3 3 41701 5900 526 5683 13596;13597;13598 15616;15617;15618 15616 3 FAPVVAPKPK Unmodified 1052.6383 0.6382516 124 A0A0N4SVD2;A0A0N4SUX7;A0A0N4SVP4;Q7TQE2;Q62523 Zyx Zyxin yes no 0 0 0 1 12 0 1 54.039 54.039 3 0.00044351 11735 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.85 70.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6251.4 5901 124 5684 13599 15619 15619 1 FAQEAEAAR Unmodified 991.47231 0.47230849 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 7.33 4.03 1 1 1 40.65 40.65 2 0.0039526 11913 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.392 43.945 147.36 275.13 259.54 172.64 122.6 390.92 139 272 260 167 120 370 1 2 2 2 1 3 45386 5902 1415 5685 13600;13601;13602 15620;15621;15622 15620 3 FAQFFLCPLFDASCK Unmodified 1849.8531 0.85314811 986 F6RPJ9 Ide yes yes 0 0 0 0 12 0 1 99.873 99.873 3 0.0003317 28470 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.704 45.323 6.3633 14.752 21.187 13.878 8.573 27.471 6 14 21 14 9 26 1 1 2 2 1 2 2699.1 5903 986 5686 13603 15623;15624 15624 2 FAQHAFR Unmodified 875.44022 0.4402205 1737;2392 P62761;Q8BGZ1;F2Z3Z1 Vsnl1;Hpcal4 Visinin-like protein 1;Hippocalcin-like protein 4 no no 0 0 0 0 10 1.87 1 1 1 1 37.093 37.093 3 0.003836 7899 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.74 55.957 383.71 395.95 545.24 375.18 284.69 419.27 361 398 537 370 287 398 5 5 5 4 3 4 349630 5904 1737;2392 5687 13604;13605;13606;13607 15625;15626;15627;15628;15629;15630 15625 6 FAQIVQK Unmodified 832.48069 0.48068833 1709 P62077 Timm8b Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 0 0 0 0 10 0 1 57.846 57.846 3 0.031092 15042 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.463 11.093 59.632 34.555 47.398 0 65.015 86.623 56 37 46 0 65 83 1 1 1 0 1 1 4452.6 5905 1709 5688 13608 15631 15631 1 FAQTLEK Unmodified 835.44397 0.44396847 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 10 3 1 1 53.957 53.957 2;3 0.03501 16577 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.279 9.0306 197.02 118.85 148.5 206.59 168.16 242.51 185 124 151 200 173 232 2 1 1 2 1 2 19845 5906 1618 5689 13609;13610 15632;15633 15632 2 FASEIAGVDDLGTTGR Unmodified 1607.7791 0.77911477 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 69.054 69.054 2;3 1.0643E-30 25308 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.6 96.513 100.21 101.41 85.261 86.969 45.419 78.654 94 103 83 85 47 75 3 4 2 4 2 3 41053 5907 2736 5690 13611;13612;13613;13614 15634;15635;15636;15637;15638 15638 5 FASEITPITISVK Unmodified 1404.7864 0.78643198 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.6 1.85 2 1 1 1 77.567 77.567 2;3 1.367E-20 26148 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.69 114.97 178.42 196.09 87.787 144.92 344.89 210.4 167 194 84 140 343 204 2 3 2 3 5 3 72474 5908 2622 5691 13615;13616;13617;13618;13619 15639;15640;15641;15642;15643 15641 5 FASENDLPEWK Unmodified 1334.6143 0.61428128 1508 P34022;H7BX22 Ranbp1 Ran-specific GTPase-activating protein yes no 0 0 0 0 7.25 3.34 2 1 1 69.129 69.129 2;3 1.3631E-07 24293 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.86 61.489 118.29 37.985 104.89 112.67 127.81 95.491 111 38 102 111 129 93 3 1 2 3 2 2 13307 5909 1508 5692 13620;13621;13622;13623 15644;15645;15646;15647 15646 4 FASENDLPEWK Deamidation (N) 1335.5983 0.59829686 1508 P34022;H7BX22 Ranbp1 Ran-specific GTPase-activating protein yes no 0 1 0 0 5 0 1 71.237 71.237 3 0.064142 25962 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.544 20.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5910 1508 5692 13624 15648 15648 1 FASFIER Unmodified 868.4443 0.44430282 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 8 0 1 62.885 62.885 2 0.047225 19998 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.282 19.819 381.45 0 271.03 163.5 269.23 256.69 357 0 259 169 273 248 1 0 1 1 1 1 106940 5911 1329 5693 13625 15649 15649 1 FASFPDYLVIQIK Unmodified 1539.8337 0.83371653 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 10.8 1.48 1 1 1 1 92.246 92.246 2;3 2.3273E-06 29978 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.49 62.948 31.117 79.083 63.459 47.721 86.816 110.02 29 75 65 46 85 105 1 1 2 1 3 3 15343 5912 1641 5694 13626;13627;13628;13629 15650;15651;15652;15653 15651 4 FASTVQGDVR Unmodified 1078.5407 0.5407224 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 8.5 2.69 1 1 1 1 46.605 46.605 2 4.1297E-12 13805 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 169.65 105.09 555.19 540.25 640.33 526.02 454.42 785.47 523 553 646 524 480 749 4 5 5 5 4 5 179270 5913 1223 5695 13630;13631;13632;13633 15654;15655;15656;15657;15658 15654 5 FASYIEK Unmodified 856.43307 0.43306943 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 9.2 2.04 1 1 2 1 60.949 60.949 2;3 0.0082148 21330 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.12 66.759 1195.4 1151.8 1001.3 1276.8 1348.8 1687.4 1125 1174 1044 1246 1401 1619 6 6 5 6 6 6 168200 5914 1304 5696 13634;13635;13636;13637;13638 15659;15660;15661;15662;15663;15664 15664 6 FATASADGQIFIYDGK Unmodified 1702.8203 0.82025131 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8.57 4.1 1 1 1 1 1 2 74.722 74.722 3 1.0663E-07 25542 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.07 86.54 237.37 233.21 276.76 328.9 278.42 166.14 223 232 279 315 278 158 5 5 6 6 5 3 41001 5915 1263 5697 13639;13640;13641;13642;13643;13644;13645 15665;15666;15667;15668;15669;15670;15671;15672;15673 15670 9 FATDGEGYKPCDPQVIR Unmodified 1951.9098 0.90981137 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 56.157 56.157 3 4.1169E-06 19014 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.719 54.896 356.19 169.99 224.65 175.26 335.93 283.91 334 176 222 171 333 273 4 2 3 2 3 3 50442 5916 2148 5698 13646;13647;13648;13649 15674;15675;15676;15677 15677 4 FATEAAITILR Unmodified 1204.6816 0.68157298 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 9 0 2 73.903 73.903 2;3 1.8109E-07 24457 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.45 65.059 99.336 0 76.166 76.343 0 28 93 0 74 74 0 28 1 0 1 1 0 1 16944 5917 1356 5699 13650;13651 15678;15679 15678 2 FATEYCNTIEGTAK Unmodified 1603.7188 0.7188227 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 13 0 1 60.275 60.275 3 0.00023993 21270 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.972 41.943 118.6 100.53 0 68.369 142.25 0 111 102 0 65 139 0 1 1 0 1 1 0 9238.6 5918 815;2590 5700 13652 15680 15680 1 FATFVFNVFDENK Unmodified 1576.7562 0.75619449 2439 Q8BNY6 Ncs1 Neuronal calcium sensor 1 yes yes 0 0 0 0 10.5 0.5 1 1 95.79 95.79 3 0.0011388 31233 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.628 40.522 0 0 0 0 28.987 8.7668 0 0 0 0 28 9 0 0 0 0 1 1 4436.9 5919 2439 5701 13653;13654 15681;15682 15681 2 FATLTLQER Unmodified 1077.5819 0.58185894 918 E9Q6J8;Q08274 Dmwd Dystrophia myotonica WD repeat-containing protein yes no 0 0 0 0 9 0 1 61.138 61.138 2 0.050221 18429 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.908 23.956 59.867 0 37.173 57.452 81.879 66.954 56 0 37 56 83 65 1 0 1 1 1 1 3143 5920 918 5702 13655 15683 15683 1 FATLYSPGHR Unmodified 1147.5774 0.57744226 300 A0A1L1SSA0;Q8C522 Endod1 Endonuclease domain-containing 1 protein yes no 0 0 0 0 10 0 1 48.75 48.75 3 0.0020421 11128 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.933 49.73 0 125.96 102.81 0 122.24 95.65 0 120 102 0 120 93 0 1 1 0 1 1 6280.7 5921 300 5703 13656 15684 15684 1 FATVEVTDKPVDEALR Unmodified 1788.9258 0.92577901 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 63.9 63.9 3 1.1014E-05 22854 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.95 51.088 473.7 264.2 411.82 401.57 473.23 424.62 445 278 414 398 484 411 3 2 3 3 3 3 51803 5922 241 5704 13657;13658;13659;13660 15685;15686;15687;15688 15688 4 FAVFGLGNK Unmodified 951.5178 0.51780212 1530 Q05DV1;P37040;E9PVT9;E9Q997 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 8.33 5.19 1 2 74.405 74.405 2;3 0.01725 25555 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.607 29.1 89.599 124.27 70.784 58.798 19.491 78.884 84 122 74 56 19 74 3 3 3 2 1 2 50071 5923 1530 5705 13661;13662;13663 15689;15690;15691;15692 15689 4 FAVFIEK Unmodified 852.47454 0.47454032 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 9.33 3.94 1 1 1 1 1 1 73.144 73.144 2 0.011479 24196 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.89 71.326 2594.4 1448.4 1559.2 2286 2873.5 2541.1 2430 1487 1553 2226 2931 2445 3 3 3 5 5 4 365970 5924 1557 5706 13664;13665;13666;13667;13668;13669 15693;15694;15695;15696;15697;15698;15699 15694 7 FAVFLSEVSENK Deamidation (N) 1369.6765 0.67654718 2328 Q80WG5;Q8R502 Lrrc8a;Lrrc8c Volume-regulated anion channel subunit LRRC8A;Volume-regulated anion channel subunit LRRC8C yes no 0 1 0 0 10 0 1 83.806 83.806 3 0.0039769 26597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.434 37.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5925 2328 5707 13670 15700 15700 915 1 FAVGSGAR Unmodified 763.39769 0.39768698 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 8.5 0.5 1 1 40.254 40.254 2 0.0012277 9269 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.24 76.748 400.85 404.62 274.37 432.26 439.08 494.89 377 410 278 418 455 476 2 2 1 2 2 2 84426 5926 3303 5708 13671;13672 15701;15702 15701 2 FAVHGDTR Unmodified 901.44061 0.44061443 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 32.037 32.037 3 0.0010592 6942 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.5 66.51 591.48 613.18 806.87 595.51 730.48 563.83 557 626 807 590 732 541 3 4 5 4 3 4 175890 5927 2291 5709 13673;13674;13675;13676;13677 15703;15704;15705;15706;15707 15704 5 FAVLYQPLAGNDQAK Unmodified 1633.8464 0.84640648 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 9.8 0.748 2 2 1 74.476 74.476 2;3;4 9.1852E-32 22514 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 165.66 135.1 356.98 111.57 141.71 275.94 278.39 354.5 334 114 142 260 287 340 5 3 3 2 4 5 156870 5928 644 5710 13678;13679;13680;13681;13682 15708;15709;15710;15711;15712 15710 5 FAVLYQPLAGNDQAK Deamidation (N) 1634.8304 0.83042206 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 1 0 0 11 2 1 1 75.299 75.299 3 0.00034688 28085 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.352 41.383 147.3 147.94 184.3 140.34 189.16 49.036 139 148 185 139 187 46 2 1 2 1 1 1 53635 5929 644 5710 13683;13684 15713;15714 15714 184 2 FAVYLPPQAESGK Unmodified 1405.7242 0.72416608 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43;H3BJC6 Esd S-formylglutathione hydrolase yes no 0 0 0 0 9 0.707 1 2 1 69.801 69.801 2;3 7.9859E-08 22496 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.57 85.01 49.358 48.944 30.296 49.105 187.66 135.17 46 46 28 46 186 130 1 1 1 1 3 2 23437 5930 1122 5711 13685;13686;13687;13688 15715;15716;15717;15718 15716 4 FAYDGLK Unmodified 812.40685 0.40685468 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 8 0 1 60.188 60.188 2 0.026678 18718 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.139 49.115 337.03 281.27 464 0 441.91 350.9 318 293 446 0 434 341 1 1 1 0 1 1 27459 5931 2736 5712 13689 15719 15719 1 FAYLYDSDR Unmodified 1148.5138 0.51383895 1104 G5E8H1 Gria2 no no 0 0 0 0 8 0 1 63.173 63.173 2 0.014674 20058 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.812 50.025 69.745 0 0 70.378 35.469 0 65 0 0 65 37 0 1 0 0 1 1 0 6219.4 5932 1104 5713 13690 15720 15720 1 FAYPAPYTTRPPK Unmodified 1507.7823 0.78234966 632 B7ZCL8;P70290;A2AN84;B7ZCL9 Mpp1 55 kDa erythrocyte membrane protein yes no 0 0 0 1 11 1 1 1 54.562 54.562 3 0.00046381 13543 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.089 49.556 0 47.859 64.904 57.34 28.291 98.331 0 46 65 56 28 93 0 1 1 1 1 2 6700.9 5933 632 5714 13691;13692 15721;15722 15721 2 FCDPLGSSFAVTGYDLAEILR Unmodified 2330.1253 0.12528345 3299 Q9R0D8 Wdr54 WD repeat-containing protein 54 yes yes 0 0 0 0 8 0 1 102.59 102.59 3 5.4472E-05 36097 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.539 40.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5934 3299 5715 13693 15723 15723 1 FCETTIGCK Unmodified 1114.4787 0.47871577 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 7 0 1 53.975 53.975 3 0.027035 16392 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.462 28.15 0 58.877 42.306 88.303 52.521 58.197 0 56 46 84 56 56 0 1 1 1 1 1 2451.7 5935 1368 5716 13694 15724 15724 1 FCETTIGSK Unmodified 1041.4801 0.48009598 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 8.5 2.69 1 1 1 1 52.915 52.915 2;3 0.0009881 15944 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.3 66.801 227.62 154.25 94.949 149.12 120.52 155.39 213 157 92 140 121 149 3 3 2 3 2 3 20207 5936 1994 5717 13695;13696;13697;13698 15725;15726;15727;15728 15726 4 FCGAFAILHVR Unmodified 1289.6703 0.67029679 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 13 0 1 68.54 68.54 3 0.0021332 25282 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.102 40.316 0 39.368 0 49.237 55.343 28.269 0 37 0 46 56 28 0 1 0 1 1 1 6166.2 5937 2513 5718 13699 15729 15729 1 FCGLCVCPCNK Unmodified 1413.5662 0.56616735 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 9.5 0.5 1 1 61.842 61.842 2 4.8746E-08 16863 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.08 96.75 0 0 0 28 27.631 48.248 0 0 0 28 28 46 0 0 0 1 1 1 7444.8 5938 1681 5719 13700;13701 15730;15731 15731 2 FCIWTESAFR Unmodified 1315.6019 0.60194245 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 10.7 1.7 1 1 1 77.261 77.261 2 0.010771 23773 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.404 47.243 59.411 33.941 192.14 127.88 146.62 67.488 56 37 185 130 148 65 1 1 2 2 2 1 13658 5939 3093 5720 13702;13703;13704 15732;15733;15734 15733 3 FCLDADVFVLVANSESTLMNTEK Unmodified 2602.2295 0.22949053 2357 Q811U4;D3Z5P8 Mfn1 Mitofusin-1 yes no 0 0 0 0 6 0 1 81.616 81.616 4 0.037803 30215 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 28.412 14.397 0 19.008 8.5975 0 28.62 19.437 0 18 9 0 28 19 0 1 1 0 1 1 1161.2 5940 2357 5721 13705 15735 15735 1 FCLDNGAK Unmodified 923.4171 0.41710179 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 9.25 2.28 1 1 1 1 54.356 54.356 2 0.0047911 16622 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.25 60.574 365.65 192.46 419.35 305.74 198.04 559.77 344 195 404 306 204 535 4 3 2 3 2 5 63790 5941 1334 5722 13706;13707;13708;13709 15736;15737;15738;15739;15740 15736 5 FCLDNGAK Deamidation (N) 924.40112 0.40111738 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 1 0 0 7 0 1 57.256 57.256 3 0.0068538 17841 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.302 55.511 0 58.869 42.786 77.532 42.546 58.482 0 56 46 74 46 56 0 1 1 1 1 1 9241.6 5942 1334 5722 13710 15741 15741 401 1 FCLEGMEESGSEGLDELIFAQK Unmodified 2488.1138 0.11379207 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 6 0 1 95.678 95.678 3 0.0062814 36120 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.973 26.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 786.59 5943 3038 5723 13711 15742 15742 1 FCLGLLSNVNR Unmodified 1291.6707 0.67069072 544 A2CG45;A2CG44;Q8C3Y6;E9Q3M0;Q8BUN5;Q9JIW5;P97454;P70340;Q62432 Smad3;Smad1;Smad2;Smad9;Smad5 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 9;Mothers against decapentaplegic homolog 5;Mothers against decapentaplegic homolog 1;Mothers against decapentaplegic homolog 2 yes no 0 0 0 0 12 0 1 74.88 74.88 2 0.00042377 19699 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.692 53.746 0 0 107.92 54.776 0 0 0 0 102 56 0 0 0 0 1 1 0 0 5468 5944 544 5724 13712 15743 15743 1 FCNVDDDELR Unmodified 1281.5296 0.52956537 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 53.764 53.764 2 0.0014185 18362 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.136 56.985 0 0 29.01 28.875 0 49.036 0 0 28 28 0 46 0 0 1 1 0 1 4367 5945 2264 5725 13713;13714 15744;15745 15744 2 FCNVDDDELREYCIQAFESFVR Unmodified 2811.2269 0.22686477 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 5.5 0.5 1 1 87.901 87.901 3 0.0006772 33603 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.348 29.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5946 2264 5726 13715;13716 15746;15747 15746 2 FCPAGVYEFVPLEQGDGFR Unmodified 2187.0095 0.0095254139 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 6 0 1 87.125 87.125 3 0.0053733 32742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.515 30.318 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2538.3 5947 2244 5727 13717 15748 15748 1 FCTGLTQIETLFK Unmodified 1556.7909 0.79086543 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 9.82 3.16 1 1 1 3 2 1 2 90.785 90.785 2;3;4 9.2734E-33 35902 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 181.66 127.24 1222 726.64 965.41 1497 1111.3 1211 1152 723 962 1435 1122 1160 10 7 9 10 7 6 1012700 5948 1883 5728 13718;13719;13720;13721;13722;13723;13724;13725;13726;13727;13728 15749;15750;15751;15752;15753;15754;15755;15756;15757;15758;15759;15760;15761;15762;15763;15764 15763 16 FCTLLGGTTADAMCPILEFEADRR Unmodified 2743.2768 0.27679185 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 1 8 0.816 1 1 1 87.858 87.858 3;4 1.4366E-09 31782 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.165 50.363 9.5851 14.25 0 30.604 9.414 68.036 9 14 0 28 9 65 1 1 0 1 1 2 7538.7 5949 1606 5729 13729;13730;13731 15765;15766;15767 15766 3 FCTTGIDGAMTIWDFK Unmodified 1861.8379 0.83789198 3303 Q9R0Q6 Arpc1a Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 0 8.5 0.5 1 1 91.579 91.579 3 1.1408E-12 32414 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.62 116.13 0 62.675 69.688 27.143 37.455 0 0 60 69 28 37 0 0 2 2 1 1 0 12609 5950 3303 5730 13732;13733 15768;15769 15769 2 FDAGELITQR Unmodified 1148.5826 0.58258722 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 8.67 3.09 1 1 1 63.907 63.907 2;3 0.00011876 21884 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.01 70.373 187.05 152.17 199.17 157.79 188.74 232.33 176 158 197 158 195 223 1 2 1 2 3 3 29598 5951 1788 5731 13734;13735;13736 15770;15771;15772 15770 3 FDAYCFKPK Unmodified 1174.5481 0.54811597 851 E9QMK2;E9PYH0;Q62059 Vcan Versican core protein yes no 0 0 0 1 10 0.816 1 1 1 60.655 60.655 3 0.008164 18245 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.349 52.569 838.67 534.16 879.7 666.57 1310.5 709.07 789 569 874 677 1314 695 2 2 2 2 3 2 54406 5952 851 5732 13737;13738;13739 15773;15774;15775 15773 3 FDDAVVQSDMK Unmodified 1253.5598 0.55980286 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 7.33 4.03 1 1 1 61.415 61.415 2 8.8741E-13 21679 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.79 103.94 187.12 84.605 218.85 125.68 179.09 251.8 176 92 213 130 185 241 3 2 3 3 3 3 24608 5953 1762 5733 13740;13741;13742 15776;15777;15778 15778 3 FDDDKVSIVTPEDILR Unmodified 1860.9469 0.94690838 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 1 5 0 1 77.007 77.007 3 0.0014381 28758 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.814 38.151 0 38.766 36.002 38.295 0 49.036 0 37 37 37 0 46 0 1 1 1 0 1 4821 5954 853 5734 13743 15779 15779 1 FDDGAGGDNEVQR Unmodified 1378.5749 0.57493566 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 2 0.816 1 1 1 41.911 41.911 2;3 5.0247E-18 11883 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 127.78 107.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5955 1555 5735 13744;13745;13746 15780;15781;15782 15780 3 FDEAALSIQK Unmodified 1120.5764 0.57643921 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 8 0 1 66.089 66.089 3 0.0018017 21685 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.726 32.312 0 39.368 0 40.441 0 39.442 0 37 0 37 0 37 0 1 0 1 0 1 16870 5956 775 5736 13747 15783 15783 1 FDEAIQLR Unmodified 990.51345 0.51344502 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 5 0 1 61.431 61.431 2 0.010956 21389 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.279 48.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5957 1357 5737 13748 15784 15784 1 FDEETTNGEGR Unmodified 1253.516 0.51602379 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 0 1.5 0.5 1 1 39.193 39.193 2 1.3093E-07 10807 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.27 85.147 50.043 54.833 18.674 59.456 33.954 58.727 47 55 19 56 37 56 2 2 1 2 2 2 7210 5958 3232 5738 13749;13750 15785;15786 15785 2 FDEETTNGEGR Deamidation (N) 1254.5 0.50003938 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 1 0 0 13 0 1 40.709 40.709 2 9.2307E-07 11823 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.28 90.074 0 47.979 57.713 0 66.005 57.813 0 46 56 0 65 56 0 1 1 0 1 1 6691.6 5959 3232 5738 13751 15787 15787 1110 1 FDEIFLK Unmodified 910.48002 0.48001963 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 8 0 1 79.367 79.367 2 0.027113 27682 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.065 9.1068 48.336 94.156 91.898 63.653 101.82 56.791 46 93 93 65 102 56 1 1 1 1 1 1 5657.6 5960 2095 5739 13752 15788 15788 1 FDELYHLK Unmodified 1063.5338 0.53384611 609 B7ZNS2;B1AZP2;H3BJD4;I1E4X0;F6YMR0;E9PUF2 Dlgap4 Disks large-associated protein 4 yes no 0 0 0 0 10 3 1 1 65.938 65.938 3 0.020694 22145 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.472 13.04 69.42 112.49 56.059 37.1 56.581 107.12 65 111 56 37 56 102 1 2 1 1 1 2 9339.2 5961 609 5740 13753;13754 15789;15790 15789 2 FDETEQALANER Unmodified 1421.6423 0.64228694 393 A0A2R8VHK2;F8WHR6;Q569Z5 Ddx46 Probable ATP-dependent RNA helicase DDX46 yes no 0 0 0 0 3 0 1 55.832 55.832 3 0.0028719 19363 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.448 32.388 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 2074.2 5962 393 5741 13755 15791 15791 1 FDETTADGR Unmodified 1010.4305 0.43050325 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 5.5 4.39 1 1 1 1 39.81 39.81 2 3.1062E-05 11953 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 141.48 90.145 342.21 55.492 293.48 239.11 362.21 390.21 320 55 279 241 367 375 3 2 2 4 4 4 123970 5963 1887 5742 13756;13757;13758;13759 15792;15793;15794;15795;15796 15793 5 FDETTADGRK Unmodified 1138.5255 0.52546627 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 1 5 0 1 39.572 39.572 3 0.02176 10890 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.683 24.596 87.999 91.334 100.76 82.708 106.63 165.39 83 93 102 83 111 158 1 1 1 1 1 1 6938.4 5964 1887 5743 13760 15797 15797 1 FDFLCQYHKPASK Unmodified 1639.7817 0.78169773 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 1 11 0 1 60.279 60.279 4 0.00034206 15798 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.92 54.395 0 0 0 1415 0 0 0 0 0 1415 0 0 0 0 0 1 0 0 20749 5965 2999 5744 13761 15798 15798 1 FDFVHDLVLYLYR Unmodified 1698.877 0.87697832 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 12 0.816 1 1 1 101.45 101.45 3 5.9278E-06 33637 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.65 93.088 47.314 0 0 13.116 0 25.396 46 0 0 12 0 25 3 0 0 1 0 2 16713 5966 2185 5745 13762;13763;13764 15799;15800;15801;15802;15803 15800 5 FDGALNVDLTEFQTNLVPYPR Unmodified 2408.2012 0.20122559 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 7.97 2.6 2 1 10 8 3 1 2 1 2 98.565 98.565 3;4 1.4345E-131 34818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 234.11 186.47 859.66 848.26 940.25 792.92 1069.4 1003.1 808 856 937 774 1074 964 18 22 22 21 21 24 1266200 5967 44;1313;1794;3223 5746 13765;13766;13767;13768;13769;13770;13771;13772;13773;13774;13775;13776;13777;13778;13779;13780;13781;13782;13783;13784;13785;13786;13787;13788;13789;13790;13791;13792;13793;13794 15804;15805;15806;15807;15808;15809;15810;15811;15812;15813;15814;15815;15816;15817;15818;15819;15820;15821;15822;15823;15824;15825;15826;15827;15828;15829;15830;15831;15832;15833;15834;15835;15836;15837;15838;15839;15840;15841;15842;15843;15844;15845;15846;15847;15848;15849;15850;15851;15852 15811 49 FDGALNVDLTEFQTNLVPYPR Deamidation (N) 2409.1852 0.18524117 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 0 7.2 1.47 2 2 1 96.951 96.951 3 1.1814E-16 36119 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.98 97.939 45.91 18.343 22.911 28.882 18.975 9.594 43 19 23 28 19 9 3 2 2 2 1 1 14671 5968 44;1313;1794;3223 5746 13795;13796;13797;13798;13799 15853;15854;15855;15856;15857;15858 15853 12 6 FDGGVVIAADMLGSYGSLAR Unmodified 1997.9881 0.98806169 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 9 0 1 93.93 93.93 3 0.00034798 33538 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.089 35.426 0 0 0 9.837 0 49.036 0 0 0 9 0 46 0 0 0 1 0 1 1698.8 5969 1864 5747 13800 15859 15859 1 FDGIFESLLPVNGLLSGDK Deamidation (N) 2021.0357 0.035723389 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 1 0 0 11 2 1 1 106.9 106.9 3 2.4182E-07 37173 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.035 64.196 7.4107 9.0677 9.1674 0 0 28.782 7 9 9 0 0 27 2 1 1 0 0 2 2522.5 5970 2095 5748 13801;13802 15860;15861 15860 811 2 FDGILGMGYPHISVNNVLPVFDNLMQQK Unmodified 3145.5729 0.57289751 1049 F8WIR1;P18242;F6Y6L6 Ctsd Cathepsin D yes no 0 0 0 0 10 0 1 101.69 101.69 4 0.030547 33063 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 26.273 20.37 0 5.32 0 0 0 9.594 0 5 0 0 0 9 0 1 0 0 0 1 875.01 5971 1049 5749 13803 15862 15862 1 FDIEDSEAECR Unmodified 1369.5456 0.54560936 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 3 0 1 54.902 54.902 2 0.0023399 18943 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.626 53.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5972 581 5750 13804 15863 15863 1 FDKEEEAVAIANAAEVGLAGYFYSQDPAQIWR Unmodified 3557.7103 0.71031351 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 1 13 0 1 105.4 105.4 4 1.1833E-09 43030 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.825 52.339 0 20.08 13.297 14.51 0 35.178 0 19 14 14 0 33 0 1 2 2 0 2 3390.1 5973 2469 5751 13805 15864;15865 15865 2 FDLGQDVIDFTGHALALYR Unmodified 2150.0797 0.07965389 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 8.5 0.5 1 1 98.097 98.097 3 1.2381E-53 35178 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.15 140.7 25.707 8.9279 0 9.6683 21.522 0 24 9 0 9 21 0 2 1 0 1 2 0 21442 5974 1595 5752 13806;13807 15866;15867;15868 15866 3 FDLGQDVIDFTGHSLALYR Unmodified 2166.0746 0.074568512 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 10 2.16 1 1 1 91.321 91.321 3 3.4754E-08 32354 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.356 66.895 39.225 26.842 76.183 37.033 19.564 9.0357 37 28 75 37 19 9 2 1 2 1 1 1 17316 5975 2132 5753 13808;13809;13810 15869;15870;15871;15872 15871 4 FDLMYAK Unmodified 886.42588 0.42587556 1313;1794;44;3223;2013 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2;Q3UX10 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8;Tubal3 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3 no no 0 0 0 0 8.5 3.69 1 1 1 2 1 70.409 70.409 2;3 0.0095702 26130 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.96 63.807 2218.7 1791.9 2128.1 2287.5 3610.2 1630.5 2078 1817 2087 2223 3592 1574 7 6 6 6 8 5 1875900 5976 44;1313;1794;3223;2013 5754 13811;13812;13813;13814;13815;13816 15873;15874;15875;15876;15877;15878;15879;15880;15881 15880 9 FDLNSPWEAFPAYR Unmodified 1711.7995 0.79945628 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 86.199 86.199 2;3 8.0982E-05 30119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.753 50.069 54.291 61.801 53.562 0 0 39.442 51 60 51 0 0 37 2 2 2 0 0 1 12918 5977 3152 5755 13817;13818;13819 15882;15883;15884 15883 3 FDLVSFIPLLR Unmodified 1318.7649 0.76490868 279 A0A1D5RLY2;Q80WQ2 Vac14 Protein VAC14 homolog yes no 0 0 0 0 4.67 5.19 2 1 105.2 105.2 2 7.9243E-10 29178 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.43 93.445 6.408 13.4 12.351 33.634 32.226 3.0004 6 13 12 32 32 3 1 3 1 4 3 1 6278.2 5978 279 5756 13820;13821;13822 15885;15886;15887;15888 15888 4 FDNLYCCR Unmodified 1146.4586 0.45864903 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 8 0 1 55.44 55.44 2 0.026352 16409 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.486 59.711 78.833 63.14 42.157 76.98 73.868 0 74 65 46 74 74 0 1 1 1 1 1 0 5151.9 5979 2298;1040 5757 13823 15889 15889 1 FDPAMFNISPGAVQF Unmodified 1639.7705 0.77046434 2645 Q8R1N4;A0A0A0MQL8 Nudcd3 NudC domain-containing protein 3 yes no 0 0 0 0 10.5 2.5 1 1 102.48 102.48 3 0.0010781 36079 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.598 33.368 2.136 10.984 0 4.372 0 3.198 2 11 0 4 0 3 1 2 0 1 0 1 2273.1 5980 2645 5758 13824;13825 15890;15891 15890 2 FDPDATQFIEFCK Unmodified 1616.7181 0.71809442 111 A0A0J9YTW6;B1AWN6;A2ASI5 Scn2a1;Scn3a Sodium channel protein no no 0 0 0 0 7 0 1 81.66 81.66 3 0.00011315 29484 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.552 68.456 0 29.187 36.176 47.296 43.936 58.442 0 28 37 46 46 56 0 1 1 1 1 1 4313.2 5981 111 5759 13826 15892 15892 1 FDQCVLDK Unmodified 1023.4695 0.46953129 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 0 8.67 3.09 1 1 1 60.582 60.582 2 0.0058129 21244 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.65 36.272 338.81 286.38 342.31 222.75 292.34 357.3 319 296 343 223 301 343 3 3 3 2 3 3 37244 5982 3145 5760 13827;13828;13829 15893;15894;15895 15895 3 FDQLFDDESDPFEVLK Unmodified 1942.8836 0.88363942 128 A0A0N4SWH2;A0A0N4SV32;Q3UMP4;Q9CY58;A0A0N4SUQ1;A0A0N4SUN8 Serbp1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 0 9 4 1 1 97.866 97.866 3 4.5923E-05 35758 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.982 64.663 0 4.256 0 4.1835 10.021 7.176 0 4 0 4 10 7 0 1 0 1 1 1 1392.6 5983 128 5761 13830;13831 15896;15897 15896 2 FDSKPAPSAQPAPPPHPPSR Unmodified 2080.049 0.049022463 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 1 7.5 0.5 1 1 43.199 43.199 4 0.0001054 10628 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.876 37.515 109.05 0 66.115 86.779 75.428 136.43 102 0 65 83 74 130 2 0 1 1 1 2 8407.3 5984 2255 5762 13832;13833 15898;15899 15899 2 FDSLTDLVEHYK Unmodified 1465.7089 0.70890994 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 7.5 0.5 1 1 80.638 80.638 3 7.8674E-05 28299 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.028 45.914 108.69 129.43 93.478 152.79 238.86 180.8 102 130 93 149 241 176 1 2 1 2 2 2 9626.6 5985 1512 5763 13834;13835 15900;15901 15901 2 FDSNVSGQSSFGTSPAADNIEK Unmodified 2257.0135 0.013484397 2965 Q9CRD0;A0A0J9YUB6 Ociad1 OCIA domain-containing protein 1 yes no 0 0 0 0 5 0 1 63.515 63.515 3 6.432E-35 22399 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.73 93.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5986 2965 5764 13836 15902 15902 1 FDTDELNFPTEK Unmodified 1454.6565 0.65654002 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 7.33 4.03 1 1 1 72.501 72.501 2;3 1.8711E-08 27106 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.18 88.577 409.68 187.43 56.046 202.52 386.62 258.43 383 203 56 195 387 251 3 3 1 3 3 2 39114 5987 2253 5765 13837;13838;13839 15903;15904;15905 15905 3 FDTQYPYGEK Unmodified 1246.5506 0.55061839 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 0 6 0 1 57.639 57.639 3 0.0093315 18957 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.391 25.793 59.314 54.176 84.24 45.257 0 0 56 56 83 46 0 0 1 1 1 1 0 0 4846.3 5988 1649 5766 13840 15906 15906 1 FDTTPNELVQLNK Unmodified 1517.7726 0.77257283 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09;A0A2R8VKF8 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 7 1 1 1 71.316 71.316 2;3 5.9296E-05 23886 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.417 71.227 68.928 82.539 87.507 54.081 43.545 72.311 65 83 88 55 46 69 1 1 2 2 1 1 10820 5989 2028 5767 13841;13842 15907;15908 15908 2 FDVINLAAEK Unmodified 1118.5972 0.59717465 686 D3YUS1;Q8BIQ9;Q91WG5;O54950 Prkag2;Prkag1 5'-AMP-activated protein kinase subunit gamma-2;5'-AMP-activated protein kinase subunit gamma-1 yes no 0 0 0 0 8 0 1 76.134 76.134 3 0.0027094 26212 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.353 32.267 20.387 0 0 0 27.265 58.918 19 0 0 0 28 56 1 0 0 0 1 1 2617 5990 686 5768 13843 15909 15909 1 FDVNTSAVQVLIEHIGNLDR Unmodified 2239.1597 0.15969512 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10 1.87 1 1 1 1 94.102 94.102 3 1.0961E-63 34112 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 152.13 124.98 40.774 0 0 20.426 37.985 24.001 38 0 0 19 38 23 2 0 0 1 2 1 16569 5991 2185 5769 13844;13845;13846;13847 15910;15911;15912;15913 15910 4 FDVQFPENNWINPDK Deamidation (N) 1862.8475 0.84752869 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 1 0 0 8 0 1 82.747 82.747 3 0.0029297 29350 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.514 38.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1967.3 5992 3279 5770 13848 15914 15914 1123 1 FDVQFPENNWINPDK Unmodified 1861.8635 0.8635131 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 13 0 1 82.681 82.681 3 0.00043928 32121 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.923 45.09 0 39.368 0 0 57.278 37.808 0 37 0 0 56 37 0 1 0 0 1 1 5693.1 5993 3279 5770 13849 15915 15915 1 FDYVMQFLNK Unmodified 1303.6271 0.62709457 789 D3Z7P3;D3Z7P4;F6U529 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 8 4.97 2 2 2 94.5 94.5 2;3 7.3822E-09 30267 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 152.28 102.86 110.91 43.727 106.27 104.29 45.994 186.56 104 46 104 102 48 182 3 1 3 5 1 4 107500 5994 789 5771 13850;13851;13852;13853;13854;13855 15916;15917;15918;15919;15920;15921 15918 6 FEACNYPLELYER Unmodified 1702.7661 0.76610724 1783 P63318 Prkcg Protein kinase C gamma type yes yes 0 0 0 0 7.75 3.11 1 1 1 1 72.436 72.436 2;3 8.5279E-05 26489 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.069 63.612 99.103 91.64 37.671 151.07 45.769 137.27 93 93 37 139 46 130 2 2 1 3 1 3 53491 5995 1783 5772 13856;13857;13858;13859 15922;15923;15924;15925 15922 4 FEAFEEDR Unmodified 1041.4403 0.44033966 2029 Q4V9Z5 Sez6l2 Seizure 6-like protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 56.795 56.795 2 0.030486 19796 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.038 46.866 73.401 27.76 83.442 0 29.288 78.884 69 28 79 0 28 74 2 1 2 0 1 1 9484.5 5996 2029 5773 13860;13861 15926;15927 15926 2 FEAFEHENK Unmodified 1149.5091 0.50908792 779 D3Z645;Q9QZ88 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 0 9.5 3.5 1 1 49.963 49.963 3 0.00099896 15588 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.658 50.792 148.12 127.68 172.01 178.19 365.6 172.07 139 120 167 176 363 167 1 1 1 1 2 1 17463 5997 779 5774 13862;13863 15928;15929 15928 2 FEAMLDLMQQLQALGHPPK Unmodified 2166.0966 0.096566282 2683 Q8VCI5 Pex19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 0 11 0 1 100.63 100.63 4 0.0048072 33273 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.515 24.208 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 1614.5 5998 2683 5775 13864 15930 15930 1 FEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTR Unmodified 3937.0262 0.026168341 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 13 0 1 114.54 114.54 4 2.042E-52 44859 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.21 96.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1686.1 5999 1690 5776 13865 15931 15931 1 FEDENFHYK Unmodified 1227.5197 0.51965261 2952 Q9CR16;A0A0A6YW70 Ppid Peptidyl-prolyl cis-trans isomerase D;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 9 4 1 1 52.413 52.413 3 0.0016065 17307 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.677 56.046 99.426 141.19 0 258.98 235.55 135.07 93 139 0 241 241 130 1 2 0 2 2 1 14645 6000 2952 5777 13866;13867 15932;15933 15932 2 FEDENFILK Unmodified 1153.5655 0.56554017 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 7.5 2.63 1 2 1 1 1 73.273 73.273 2;3 8.6641E-05 27351 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.23 82.43 1626.8 1430.8 1474.7 1193.3 1840.8 1818.5 1531 1471 1499 1185 1864 1753 7 7 7 5 7 7 539720 6001 1404 5778 13868;13869;13870;13871;13872;13873 15934;15935;15936;15937;15938;15939;15940;15941 15940 8 FEDENFILK Deamidation (N) 1154.5496 0.54955575 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 0 7.25 3.34 2 1 1 75.361 75.361 2;3 0.022515 28437 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.11 61.06 158.94 138.68 95.27 99.227 128.27 261.46 149 140 93 92 130 251 3 3 2 2 2 5 19288 6002 1404 5778 13874;13875;13876;13877 15942;15943;15944;15945;15946 15946 500 5 FEDGDLTLYQSNAILR Unmodified 1853.9159 0.9159426 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 0 0 0 8.5 3.25 1 1 2 2 76.86 76.86 2;3 7.8087E-44 29182 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.55 108.83 316.55 277.53 173.01 349.42 166.88 341.65 297 278 167 334 167 324 5 5 2 5 3 5 165440 6003 1414 5779 13878;13879;13880;13881;13882;13883 15947;15948;15949;15950;15951;15952;15953;15954 15954 8 FEDGDLTLYQSNAILR Deamidation (N) 1854.9 0.89995819 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 1 0 0 5 0 1 78.714 78.714 2 4.5116E-06 29509 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.15 80.139 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2257.4 6004 1414 5779 13884 15955 15955 515 1 FEDTSPADER Unmodified 1165.4887 0.48874641 2936 Q9CQN1 Trap1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 0 3 0 1 41.94 41.94 2 0.031594 12914 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.632 24.698 39.522 0 30.097 0 37.384 38.375 37 0 28 0 37 37 1 0 1 0 1 1 4908 6005 2936 5780 13885 15956 15956 1 FEDYLNAESR Deamidation (N) 1243.5357 0.5356966 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 3 0 1 62.198 62.198 2 0.037585 22235 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.056 36.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6006 879 5781 13886 15957 15957 234 1 FEDYLNAESR Unmodified 1242.5517 0.55168102 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 9 4 1 1 61.741 61.741 2 1.4673E-08 21617 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.9 102.44 490.16 457.52 186.66 488.02 483.78 489.35 460 464 185 465 500 472 2 2 1 2 2 2 70030 6007 879 5781 13887;13888 15958;15959 15958 2 FEEEDDDDDFPAPADGYYR Unmodified 2264.8658 0.86581711 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 3 3.25 3 4 3 1 69.408 69.408 3 1.079E-79 25233 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 199.33 195.83 90.907 86.796 199.76 249.92 199.82 281.9 85 87 196 243 199 267 5 5 6 8 6 7 126430 6008 3216 5782 13889;13890;13891;13892;13893;13894;13895;13896;13897;13898;13899 15960;15961;15962;15963;15964;15965;15966;15967;15968;15969;15970;15971;15972;15973;15974;15975 15966 16 FEEFLQR Unmodified 967.47633 0.47633123 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 66.069 66.069 2 0.015063 22024 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.7 73.593 88.527 0 89.36 0 83.862 86.085 83 0 83 0 83 83 1 0 1 0 1 1 13696 6009 2074 5783 13900 15976 15976 1 FEEFQTDLAAHEER Unmodified 1720.7693 0.76927837 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 59.36 59.36 3 1.0669E-11 21064 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 122.93 107.34 108.44 93.455 290.67 94.704 292.56 135.36 102 93 278 93 287 130 2 1 3 1 3 2 37051 6010 551 5784 13901;13902;13903;13904 15977;15978;15979;15980 15977 4 FEELCSDLFR Unmodified 1314.5914 0.59143734 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 6 0 1 78.289 78.289 2 0.0015853 28677 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.886 62.149 0 48.375 34.057 69.015 0 59.696 0 46 37 65 0 56 0 1 1 1 0 1 5509.6 6011 1407 5785 13905 15981 15981 1 FEELGVK Unmodified 820.43307 0.43306943 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 7 0 1 61.366 61.366 2 0.026973 19970 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 18.637 88.59 92.978 0 128.6 135.89 104.85 83 93 0 120 139 102 1 1 0 1 1 1 17656 6012 2897 5786 13906 15982 15982 1 FEELNADLFR Unmodified 1252.6088 0.60880197 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 0 7.75 3.11 1 1 1 1 76.623 76.623 2 4.1346E-15 28047 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 170.85 120.89 859.9 710.05 1065.8 934.91 1335.3 960.23 809 722 1061 935 1346 933 7 7 7 8 8 7 529380 6013 1397;1762 5787 13907;13908;13909;13910 15983;15984;15985;15986;15987;15988;15989;15990;15991 15986 9 FEELNADLFR Deamidation (N) 1253.5928 0.59281755 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 1 0 0 5 0 1 78.409 78.409 2 2.5284E-07 29341 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.78 108.77 0 38.428 56.242 45.901 54.471 58.142 0 37 56 46 56 56 0 1 1 1 1 1 6711.1 6014 1397;1762 5787 13911 15992 15992 475 1 FEEPAPLSYDSR Unmodified 1409.6463 0.64630969 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 4 0 1 60.729 60.729 2 0.0093632 21332 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.401 32.61 14.868 0 25.893 0 0 9.594 14 0 24 0 0 9 1 0 1 0 0 1 3590.5 6015 640 5788 13912 15993 15993 1 FEEQDDFESEK Unmodified 1401.5572 0.55721991 198 A0A0R4J150;B9EJ86 Osbpl8 Oxysterol-binding protein yes no 0 0 0 0 2 0 1 57.083 57.083 3 0.035902 19396 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 40.577 26.671 29.952 18.196 0 0 0 20.254 28 19 0 0 0 19 1 1 0 0 0 1 1401.4 6016 198 5789 13913 15994 15994 1 FEGEPATHTQPGVQLQSNTYDLQESNVGLK Unmodified 3286.5742 0.57421396 3317 Q9R1T4;A2A3W1 Sept6 Septin-6 yes no 0 0 0 0 4.5 0.5 1 1 65.342 65.342 4 4.1855E-32 23125 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.691 85.21 0 40.432 0 0 66.333 48.248 0 38 0 0 65 46 0 2 0 0 2 1 11385 6017 3317 5790 13914;13915 15995;15996 15996 2 FEGLTGNVQFNEK Deamidation (N) 1482.6991 0.69907354 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 1 0 0 6 0 1 68.52 68.52 3 1.5981E-06 24060 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.469 54.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6018 2286 5791 13916 15997 15997 905 1 FEGNLNTYK Unmodified 1084.5189 0.51892433 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 7 0 1 56.501 56.501 2 0.010436 17588 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.849 36.527 0 0 58.508 46.791 0 0 0 0 56 46 0 0 0 0 1 1 0 0 3631.1 6019 2507 5792 13917 15998 15998 1 FEGTTSLGEVR Unmodified 1194.5881 0.58806652 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 8 3.56 1 1 1 53.981 53.981 2 5.9065E-10 17330 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.46 105.24 147.23 225.14 131.83 0 132.05 174.25 139 223 130 0 130 167 3 3 2 0 2 3 24919 6020 2485 5793 13918;13919;13920 15999;16000;16001 16000 3 FEIPYFTTSGIQVR Unmodified 1656.8512 0.8511575 1524 P35585 Ap1m1 AP-1 complex subunit mu-1 yes yes 0 0 0 0 9.5 0.5 1 1 85.125 85.125 3 1.326E-05 29652 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.41 81.768 20.19 39.071 0 40.441 0 78.884 19 38 0 37 0 74 1 1 0 1 0 2 10096 6021 1524 5794 13921;13922 16002;16003 16002 2 FEITVGPK Unmodified 889.49092 0.49091866 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 0 8 0 1 64.616 64.616 2 0.012195 20707 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.37 51.578 88.544 0 86.487 64.49 74.442 0 83 0 83 65 74 0 1 0 1 1 1 0 5973.8 6022 2650 5795 13923 16004 16004 1 FEIVYNLLSLR Unmodified 1365.7656 0.76563696 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 3.4 4.8 4 1 100.13 100.13 2 9.2951E-17 34098 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.42 97.982 5.3023 8.8741 20.602 10.741 2.8731 25.396 5 9 20 11 3 25 1 2 2 2 1 2 6217.9 6023 3152 5796 13924;13925;13926;13927;13928 16005;16006;16007;16008;16009 16007 5 FEIWDTAGQER Unmodified 1350.6204 0.62042929 1514;2921;1683 Q9CQD1;A2A5F5;P35278;Q8C266;P61021 Rab5a;Rab5c;Rab5b Ras-related protein Rab-5A;Ras-related protein Rab-5C;Ras-related protein Rab-5B no no 0 0 0 0 13 0 1 68.028 68.028 2 0.0034221 25058 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.066 42.323 98.589 69.704 142.6 69.947 129.49 95.443 93 74 139 74 130 93 1 1 1 1 1 1 11315 6024 2921;1514;1683 5797 13929 16010 16010 1 FELCQLLPLFLPPTTVPPECHR Unmodified 2663.3604 0.36038554 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 11.1 0.639 1 4 2 100.46 100.46 3;4 6.5442E-12 32647 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.184 59.088 14 19.152 19 30.651 33.157 20.515 14 18 19 30 32 20 1 2 1 3 2 3 65681 6025 3355 5798 13930;13931;13932;13933;13934;13935;13936 16011;16012;16013;16014;16015;16016;16017;16018;16019 16011 9 FELTCYSLAPQIK Unmodified 1568.7909 0.79086543 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 9.5 0.5 1 1 78.529 78.529 3 7.3645E-19 26676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.79 119.5 167.56 56.275 104.37 180.65 292.4 46.384 157 56 102 176 289 46 2 1 1 2 2 1 20825 6026 1393 5799 13937;13938 16020;16021 16020 2 FELTGIPPAPR Unmodified 1196.6554 0.65535823 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 7.5 0.5 1 1 68.415 68.415 2 0.0027641 22322 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.192 35.539 39.701 118.39 46.243 71.045 66.371 175.06 37 112 46 65 65 166 1 2 1 1 1 3 7060.5 6027 1762 5800 13939;13940 16022;16023;16024 16023 3 FENADLNDTSR Unmodified 1280.5633 0.56330834 578 B1AR74;Q8CCN5;Q0VF62;B1B0B3 Bcas3 Breast carcinoma-amplified sequence 3 homolog yes no 0 0 0 0 4 0 1 47.576 47.576 2 0.0015084 15120 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.114 48.961 29.622 26.992 48.003 0 0 0 28 28 46 0 0 0 1 1 1 0 0 0 3404.2 6028 578 5801 13941 16025 16025 1 FENAFLSHVISQHQSLLGNIR Deamidation (N) 2410.2393 0.23934243 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 0 9.25 0.829 1 1 2 77.208 77.208 4 8.4029E-09 23487 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.221 67.706 198.47 167.61 44.564 232.65 162.85 144 186 167 46 222 167 138 4 3 1 4 3 3 27299 6029 1881 5802 13942;13943;13944;13945 16026;16027;16028;16029;16030 16029 768;769 5 FENAFLSHVISQHQSLLGNIR Unmodified 2409.2553 0.25532684 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 10.8 0.748 2 2 1 75.654 75.654 3;4 6.2556E-23 23143 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.02 113.32 59.914 117.81 169.27 155.96 166.9 154.88 56 112 167 158 167 149 1 3 5 4 4 5 446810 6030 1881 5802 13946;13947;13948;13949;13950 16031;16032;16033;16034;16035;16036;16037 16032 7 FEPFSNK Unmodified 867.41267 0.41266834 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 8.33 0.471 2 1 59.626 59.626 2;3 0.016429 18388 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.485 37.112 207.69 0 260.07 59.315 294.17 161.27 195 0 241 56 287 158 2 0 1 1 2 2 72598 6031 1375 5803 13951;13952;13953 16038;16039;16040 16038 3 FEPQINAEESEIR Unmodified 1560.742 0.74200098 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 0 3.5 0.5 1 1 59.34 59.34 2;3 0.00055278 20703 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.44 62.342 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 2742.3 6032 583 5804 13954;13955 16041;16042 16042 2 FEQSAAFFLLAGSLK Unmodified 1627.861 0.86099391 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 12 1 1 1 97.505 97.505 3 0.0007757 31866 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.83 46.47 20.387 29.315 28.537 51.371 0 59.696 19 28 28 47 0 56 1 1 1 2 0 2 12692 6033 570 5805 13956;13957 16043;16044;16045 16043 3 FESAESAEK Unmodified 996.44001 0.4400053 521 G8JL68;A2ATP5;A2ATP6;Q8C854 Myef2 Myelin expression factor 2 yes no 0 0 0 0 4.5 0.5 1 1 45.191 45.191 2 0.00031762 13980 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.38 72.942 69.468 54.9 0 50.278 97.278 49.036 65 56 0 46 93 46 1 1 0 1 1 1 8602.8 6034 521 5806 13958;13959 16046;16047 16046 2 FESDPATHNEPGVR Unmodified 1554.7063 0.70628418 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6;A0A0J9YVA6 Sept11 Septin-11 yes no 0 0 0 0 3 0 1 39.427 39.427 3 4.3458E-05 11711 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.192 61.436 24.425 18.111 27.392 38.034 41.2 28.672 23 19 28 37 42 28 1 1 1 1 1 1 23436 6035 112 5807 13960 16048 16048 1 FESFEISK Unmodified 985.47566 0.47566253 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 6.75 0.829 2 1 1 67.503 67.503 2;3 0.0075187 22076 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.71 65.319 177.48 133 175.22 142.22 83.942 115.93 167 139 176 139 83 111 3 3 3 2 1 2 13131 6036 3373 5808 13961;13962;13963;13964 16049;16050;16051;16052 16052 4 FESLEPEMNNQASR Unmodified 1650.7308 0.73078437 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 59.275 59.275 3 0.00031163 20417 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.168 53.292 59.542 44.018 54.474 47.031 0 49.036 56 46 55 46 0 46 1 1 1 1 0 1 7905.8 6037 2148 5809 13965 16053 16053 1 FESPDSQASAEQPEM Unmodified 1651.6672 0.66718106 1539 P40336 Vps26a Vacuolar protein sorting-associated protein 26A yes yes 0 0 0 0 2 0 1 62.099 62.099 3 0.00098926 21723 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.841 37.428 9.535 0 20.51 0 0 0 9 0 19 0 0 0 1 0 1 0 0 0 1547.8 6038 1539 5810 13966 16054 16054 1 FESPEVAER Unmodified 1062.4982 0.49818889 3020 Q9D0E1 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes yes 0 0 0 0 3 0 1 46.744 46.744 2 0.0034275 15104 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.601 54.983 73.482 53.831 47.739 86.26 85.79 66.842 69 56 51 83 88 65 1 1 1 1 1 1 8147.8 6039 3020 5811 13967 16055 16055 1 FESVHPNIYAIYDLIER Unmodified 2078.0473 0.047291129 1034 F8VQE9;Q8VHH5;A0A1D5RMG4 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 7 0 1 85.367 85.367 3 3.6024E-05 31138 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.329 45.526 49.128 45.631 0 30.604 0 39.442 46 46 0 28 0 37 1 1 0 1 0 1 4498 6040 1034 5812 13968 16056 16056 1 FETLEPEMNALAAR Deamidation (N) 1591.7552 0.75520821 2186 Q68FG2 Sptbn2 yes yes 0 1 0 0 9 4 1 1 74.754 74.754 2 0.014182 27647 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.554 54.875 29.782 56.136 86.158 27.202 0 29.848 28 56 84 28 0 28 1 2 2 1 0 1 8073.2 6041 2186 5813 13969;13970 16057;16058 16057 878 2 FETLEPEMNALAAR Unmodified 1590.7712 0.77119262 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7.5 3.2 1 2 1 74.822 74.822 2;3 0.00016315 27092 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.548 42.214 157.36 135.18 218.16 76.392 102.73 263.57 148 140 213 75 102 250 3 4 5 3 1 4 21644 6042 2186 5813 13971;13972;13973;13974 16059;16060;16061;16062;16063 16061 5 FEVIDKPQS Unmodified 1061.5393 0.53932542 1852 P97450 Atp5j ATP synthase-coupling factor 6, mitochondrial yes yes 0 0 0 1 6.5 0.5 1 1 60.413 60.413 2 0.016542 20244 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.26 79.472 440.15 231.71 306.94 253.17 269.26 105.36 413 243 309 253 272 102 2 1 2 2 2 1 63425 6043 1852 5814 13975;13976 16064;16065 16064 2 FEVQGLQPNGEEMTLK Deamidation (N) 1819.8662 0.86621522 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 0 5.5 0.5 1 1 75.448 75.448 3 4.0041E-05 27911 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.656 64.437 88.755 66.027 28.498 30.104 45.774 97.832 83 65 28 28 47 93 2 2 1 1 2 3 9088.1 6044 1876 5815 13977;13978 16066;16067;16068 16067 761 3 FEVQGLQPNGEEMTLK Unmodified 1818.8822 0.88219964 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 13 0 1 72.634 72.634 3 0.038141 27251 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 32.926 14.093 79.182 43.605 0 89.163 82.722 0 74 46 0 83 83 0 1 1 0 1 1 0 6706.3 6045 1876 5815 13979 16069 16069 1 FFADLLDYIK Unmodified 1243.6489 0.64887587 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 10 0.816 1 1 1 103.57 103.57 2;3 1.0031E-05 33307 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.22 64.423 24.444 10.023 30.979 9.7307 35.568 17.316 23 11 29 9 35 17 3 2 2 1 3 2 5836.9 6046 1295 5816 13980;13981;13982 16070;16071;16072;16073 16071 4 FFAPAILTPK Unmodified 1103.6379 0.63791725 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 6.5 5.5 2 2 80.233 80.233 2;3 0.00056695 27943 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.948 50.209 109.11 80.501 36.533 116.39 146.56 114.93 102 84 37 111 149 111 2 2 1 3 3 2 51767 6047 3391 5817 13983;13984;13985;13986 16074;16075;16076;16077;16078 16074 5 FFDANYDGK Unmodified 1075.4611 0.4610751 2243;2115 Q6PER3;D3Z6G3;A0A0J9YVB9;Q61166 Mapre3;Mapre1 Microtubule-associated protein RP/EB family member 3;Microtubule-associated protein RP/EB family member 1 no no 0 0 0 0 8.5 2.69 1 1 1 1 64.193 64.193 2;3 0.010168 21217 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.567 39.343 207.18 179.63 193.8 120.42 177.75 125.8 195 185 195 120 176 120 3 3 3 2 2 2 20408 6048 2243;2115 5818 13987;13988;13989;13990 16079;16080;16081;16082 16080 4 FFDDPMLLELAK Unmodified 1437.7214 0.72138888 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 8 0 1 94.939 94.939 3 0.060791 34319 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.426 17.044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6049 464 5819 13991 16083 16083 1 FFDVQLGIK Unmodified 1065.5859 0.58588168 2870 Q99M71;A0A1Y7VKS9 Epdr1 Mammalian ependymin-related protein 1 yes no 0 0 0 0 11.5 1.5 1 1 81.365 81.365 2;3 0.0058165 25686 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.287 45.73 99.169 90.744 27.348 45.906 0 103.4 93 92 28 42 0 97 2 2 1 1 0 2 8303.5 6050 2870 5820 13992;13993 16084;16085 16084 2 FFEHEVK Unmodified 934.45487 0.45486751 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 49.836 49.836 2;3 0.0053767 15554 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.262 58.382 678.38 588.8 721.83 786.94 561.45 912.46 639 602 724 769 590 871 6 5 5 6 5 6 97440 6051 1606 5821 13994;13995;13996 16086;16087;16088;16089;16090;16091 16086 6 FFEHFIEGGR Unmodified 1237.588 0.58800695 2293 Q7TQI3;D3YWF6 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 66.313 66.313 3 8.6218E-06 21774 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.02 92.168 196.78 148.17 247.12 143.11 273.51 96.421 185 148 240 140 269 94 4 3 5 4 5 3 90022 6052 2293 5822 13997;13998;13999;14000 16092;16093;16094;16095;16096;16097 16095 6 FFESYHEVPDGTQCHR Unmodified 2007.8534 0.85335912 1095 G5E814;Q9D8B4 Ndufa11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 yes no 0 0 0 0 5.5 0.5 1 1 49.443 49.443 4 6.3983E-05 15728 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.045 57.127 157.27 143.42 206.5 108.53 202.15 181.85 148 148 204 111 204 176 1 2 2 1 2 2 9110.7 6053 1095 5823 14001;14002 16098;16099 16098 2 FFETSAK Unmodified 828.40177 0.4017693 1684 P61027;D3YUS4 Rab10;Rab13 Ras-related protein Rab-10 no no 0 0 0 0 8 0.816 1 1 1 57.058 57.058 2 0.0079217 17889 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.84 75.058 787.13 419.53 803.24 745.79 573.41 854.56 740 437 800 736 609 817 3 2 3 3 3 3 65324 6054 1684 5824 14003;14004;14005 16100;16101;16102 16100 3 FFEVILIDPFHK Unmodified 1503.8126 0.81258715 3004 Q9CZM2 Rpl15 60S ribosomal protein L15 yes yes 0 0 0 0 9.5 0.5 1 1 94.715 94.715 3 0.00078058 30846 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.435 45.085 20.346 27.204 0 40.441 0 29.848 19 28 0 37 0 28 1 2 0 1 0 1 3993.5 6055 3004 5825 14006;14007 16103;16104;16105 16104 3 FFFDVGCNK Unmodified 1132.5012 0.50116577 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 0 10.8 1.33 1 1 2 1 76.021 76.021 2;3 0.0026119 23103 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.223 43.481 149.69 115.21 130.94 157.39 110.18 209.93 140 111 130 149 111 204 3 3 4 3 2 4 38511 6056 1186 5826 14008;14009;14010;14011;14012 16106;16107;16108;16109;16110;16111 16107 6 FFFDVGSNK Unmodified 1059.5025 0.50254598 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 10 0.816 1 1 1 75.732 75.732 2 0.00057768 23124 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.13 83.113 494.11 153.39 501.76 472.56 190.94 549.94 464 158 494 463 197 521 3 1 3 3 1 3 191420 6057 1542 5827 14013;14014;14015 16112;16113;16114;16115 16114 4 FFGNLMDASK Unmodified 1128.5274 0.52738052 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 10.2 0.748 1 2 2 75.473 75.473 2;3 0.0033889 22825 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.434 29.003 306.67 151.99 126.92 121.32 0 157.77 287 158 120 111 0 148 4 3 2 2 0 2 36085 6058 3022 5828 14016;14017;14018;14019;14020 16116;16117;16118;16119;16120 16118 5 FFGNNWAETYR Unmodified 1403.6258 0.62584901 2534 Q8CG76 Akr7a2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 0 9.5 0.5 1 1 70.545 70.545 2 0.0027462 22893 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.358 60.418 48.883 0 79.822 91.017 89.43 76.332 46 0 74 84 92 74 1 0 1 1 2 2 10037 6059 2534 5829 14021;14022 16121;16122 16121 2 FFGTFPGNYVK Unmodified 1275.6288 0.62880913 213 A0A0R4J1W0;B2RXQ9;D3Z080;Z4YJR7;A0A0R4J1T1;B7ZWM6;B9EKP8;Q3UTJ2 Sorbs2 Sorbin and SH3 domain-containing protein 2 yes no 0 0 0 0 11 0 1 76.936 76.936 2 0.0012351 23180 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.895 69.356 39.701 0 0 0 48.116 0 37 0 0 0 46 0 1 0 0 0 1 0 4945.4 6060 213 5830 14023 16123 16123 1 FFHETETPRPK Unmodified 1387.6884 0.68844927 2949 Q9CQZ5;A0A2R8W6V1 Ndufa6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 0 1 7 0 1 45.28 45.28 4 0.0009202 12350 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.841 52.609 87.994 80.528 110.7 92.635 128.45 95.473 83 83 111 93 130 93 1 1 1 1 1 1 5329.6 6061 2949 5831 14024 16124 16124 1 FFLCQVAGDAK Unmodified 1254.6067 0.60669348 1367;949;71 A0A0A6YY47;E9Q589;A0A0A6YWU2;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 10.8 1.34 1 2 1 1 1 72.95 72.95 2;3 2.3892E-42 21937 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 198.87 130.13 581.97 469.45 702.25 640.05 1083.6 524.61 547 477 702 644 1078 511 6 3 6 6 6 5 149470 6062 71;949;1367 5832 14025;14026;14027;14028;14029;14030 16125;16126;16127;16128;16129;16130;16131;16132 16127 8 FFLENGKHDEAWMVLK Deamidation (N) 1963.9502 0.95021962 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 1 0 1 10.5 2.5 1 1 81.592 81.592 4 2.1695E-05 30528 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.562 54.687 128.92 177.35 214.72 127.69 129.37 283.06 121 176 214 129 130 269 2 2 3 2 2 4 15024 6063 3216 5833 14031;14032 16133;16134;16135;16136 16136 1106 4 FFLGNQFGDSQQLR Unmodified 1655.8056 0.80560429 581;2787 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;B1ARU1;F6YKN8;F6RCJ3;S4R1Y6;S4R1P5;Q91ZU6;A0A087WSP0 Macf1;Dst Microtubule-actin cross-linking factor 1;Dystonin no no 0 0 0 0 10 0 1 74.235 74.235 3 0.0012255 22462 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.487 56.602 29.597 57.142 26.718 0 38.702 0 28 56 28 0 37 0 1 1 1 0 1 0 4266.7 6064 581;2787 5834 14033 16137 16137 1 FFLSHPAYR Unmodified 1136.5767 0.57671398 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 0 8 4.97 1 1 1 53.352 53.352 3 0.00014274 11518 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.89 82.01 171.71 42.387 138.88 34 98.153 96.337 161 42 129 34 97 93 3 1 2 1 2 2 26749 6065 960;1082 5835 14034;14035;14036 16138;16139;16140;16141 16141 4 FFLSHPSYR Unmodified 1152.5716 0.5716286 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 8 4.97 1 1 1 52.974 52.974 2;3 5.653E-07 11313 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 158.76 137.29 340.67 128.12 163.8 428.14 369.22 432.92 319 132 166 407 386 416 3 2 2 3 3 3 467840 6066 118;1534 5836 14037;14038;14039 16142;16143;16144;16145 16144 4 FFLVVIEK Unmodified 993.5899 0.58990443 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 12 0 2 89.1 89.1 2 0.0064022 25365 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.01 71.454 39.522 9.576 30.097 30.256 79.772 0 37 9 28 28 79 0 1 1 1 1 3 0 2802 6067 570 5837 14040;14041 16146;16147;16148 16147 3 FFMTVPVK Unmodified 967.52011 0.5201103 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 12 0 1 76.139 76.139 3 0.0083396 20220 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.682 28.596 49.012 35.596 27.913 0 47.467 18.9 46 37 28 0 46 19 1 1 1 0 1 1 5951.8 6068 967 5838 14042 16149 16149 1 FFNQLFSGLDPHALAGR Unmodified 1888.9584 0.95841654 3120 Q9DBE0;A0A2R8VHW7;A0A2R8VHJ2;A0A2R8VK32;A0A2R8VHX0;A0A2R8VHX6;A0A2R8VI19;A0A2R8VI50;A0A2R8VHG5;A0A2R8VI48 Csad Cysteine sulfinic acid decarboxylase yes no 0 0 0 0 12 0 1 86.858 86.858 3 9.7571E-05 24449 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.918 40.076 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2261.1 6069 3120 5839 14043 16150 16150 1 FFNSANVLQGFQMHTR Unmodified 1895.9101 0.91008614 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8;A6PWP7 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 12 0 1 73.556 73.556 3 8.8534E-06 19126 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.682 47.136 0 0 40.034 0 28.291 29.041 0 0 37 0 28 28 0 0 1 0 1 1 6698.9 6070 204 5840 14044 16151 16151 1 FFNTLAGFANIDQETYR Unmodified 2005.9534 0.95339074 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 10 0.816 1 1 1 88.425 88.425 3 3.0147E-06 28486 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.062 81.488 39.516 64.703 9 0 0 20.254 37 65 9 0 0 19 1 2 1 0 0 1 26743 6071 3261 5841 14045;14046;14047 16152;16153;16154 16153 3 FFPASADR Unmodified 909.43447 0.43446642 1331 P09103;E9Q8G8 P4hb Protein disulfide-isomerase yes no 0 0 0 0 9 0 1 53.992 53.992 2 0.032763 14984 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.69 37.174 0 0 86.872 65.867 0 78.884 0 0 83 65 0 74 0 0 1 1 0 1 8807.7 6072 1331 5842 14048 16155 16155 1 FFPEDVSEELIQEITQR Unmodified 2079.0161 0.01605058 1453 P26043;Q7TSG6 Rdx Radixin yes no 0 0 0 0 5.5 0.5 1 1 101.38 101.38 3 2.8521E-25 36059 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.19 114.76 4.272 3.9679 0 13.372 0 0 4 4 0 13 0 0 1 1 0 2 0 0 4755.4 6073 1453 5843 14049;14050 16156;16157;16158 16156 3 FFPLEAWQIGK Unmodified 1334.7023 0.70230842 1182 O35215;G3UZN1 Ddt D-dopachrome decarboxylase no no 0 0 0 0 11.4 1.4 1 1 1 2 2 90.285 90.285 2;3 9.6973E-11 25794 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 142.43 105.74 162.02 156.34 82.47 93.968 367.48 197.98 152 157 85 93 364 192 4 4 2 2 5 4 107620 6074 1182 5844 14051;14052;14053;14054;14055;14056;14057 16159;16160;16161;16162;16163;16164;16165 16163 7 FFPVISLEEGFFK Unmodified 1558.8072 0.80716742 1780 P63250 Kcnj3 G protein-activated inward rectifier potassium channel 1 yes yes 0 0 0 0 10 0 1 101.92 101.92 3 8.8561E-05 33023 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.858 60.332 18.177 12.606 0 9.4651 19.772 20.756 17 13 0 9 20 20 1 1 0 1 1 1 1845.1 6075 1780 5845 14058 16166 16166 1 FFPYGDASK Unmodified 1030.476 0.47599688 1737;2392 P62761;Q8BGZ1;F2Z3Z1 Vsnl1;Hpcal4 Visinin-like protein 1;Hippocalcin-like protein 4 no no 0 0 0 0 10.3 1.98 2 1 1 1 2 65.254 65.254 2;3 3.1131E-05 20505 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.39 102.08 1195.6 1106.7 1634 1352.7 1574.4 1659.6 1127 1130 1619 1350 1592 1599 5 6 7 9 6 9 376090 6076 1737;2392 5846 14059;14060;14061;14062;14063;14064;14065 16167;16168;16169;16170;16171;16172;16173;16174;16175;16176;16177 16171 11 FFPYYVYNIIGGLDEEGK Unmodified 2123.0252 0.025158703 413 A0A338P7C0;O09061;A0A338P7F1 Psmb1 Proteasome subunit beta type-1 yes no 0 0 0 0 11 0 1 104 104 3 1.4516E-06 34388 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.433 55.192 39.346 22.952 8.8531 0 38.702 0 38 23 9 0 37 0 2 2 1 0 1 0 4038.3 6077 413 5847 14066 16178;16179;16180 16179 3 FFQLAAQWPTHVK Unmodified 1571.8249 0.82488317 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 12 0 2 75.333 75.333 3;4 0.0013728 19987 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.227 43.688 59.862 73.924 46.391 117.71 45.114 176.73 56 74 46 111 46 167 1 2 1 2 1 2 26344 6078 2594 5848 14067;14068 16181;16182 16182 2 FFQPTEMAAQDFFQR Unmodified 1861.8458 0.84575455 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 84.915 84.915 2;3 1.7582E-05 30337 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.29 80.382 29.901 28.427 0 120.96 84.439 49.036 28 28 0 111 84 46 2 1 0 3 2 1 30538 6079 1400 5849 14069;14070;14071;14072 16183;16184;16185;16186 16184 4 FFQPTEMASQDFFQR Unmodified 1877.8407 0.84066917 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 7 0 1 81.512 81.512 3 4.3276E-23 29334 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 141.82 31.978 29.699 36.92 26.639 29.016 0 29.848 28 37 28 28 0 28 1 1 1 1 0 1 6434.4 6080 1401 5850 14073 16187 16187 1 FFQPVLKPMLPPDAFQGK Unmodified 2059.0965 0.096489928 2912 Q9CQ62 Decr1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 1 6.5 5.5 1 1 85.43 85.43 4 0.00010314 23734 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.489 50.928 39.701 106.72 108.21 123.14 130.43 67.945 37 102 111 120 129 65 1 2 2 2 2 2 7907.3 6081 2912 5851 14074;14075 16188;16189;16190 16190 3 FFSCMQSDFSK Unmodified 1382.5635 0.56350803 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 9.5 0.5 1 1 73.553 73.553 2 4.1999E-17 22174 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 137.89 100.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6082 2702 5852 14076;14077 16191;16192 16192 2 FFSEYEK Unmodified 948.4229 0.42289868 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 7 0 1 63.066 63.066 3 0.053984 20647 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.849 25.921 0 19.566 38.86 0 38.702 0 0 19 37 0 37 0 0 1 1 0 1 0 2216.9 6083 1888 5853 14078 16193 16193 1 FFTEEVDSR Unmodified 1128.5088 0.50875357 2567 Q8JZN5;A0A0G2JDY4 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 59.692 59.692 2 0.0047819 20698 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.676 56.949 98.071 64.323 53.891 117.6 85.129 166 92 65 56 112 92 158 2 1 1 2 2 2 6544.6 6084 2567 5854 14079;14080 16194;16195 16194 2 FFTGQITAAGK Unmodified 1139.5975 0.597509 2142 Q61941;E9Q8F4;Q8C9V5;Q8BGK0 Nnt NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 66.006 66.006 2 0.002778 18178 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.062 49.441 29.794 27.469 18.76 0 29.288 37 28 28 19 0 28 37 1 1 1 0 1 1 7445.5 6085 2142 5855 14081;14082 16196;16197 16197 2 FFTINPEDGFIK Unmodified 1426.7133 0.71326704 1627 P55288 Cdh11 Cadherin-11 yes yes 0 0 0 0 8.5 0.5 1 1 85.618 85.618 3 0.00019364 29843 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.522 54.965 29.684 27.165 37.429 18.536 0 47 28 28 37 19 0 47 1 1 1 1 0 1 4345.3 6086 1627 5856 14083;14084 16198;16199 16199 2 FFTNYESR Unmodified 1062.4771 0.47705951 2765 Q91XF0 Pnpo Pyridoxine-5'-phosphate oxidase yes yes 0 0 0 0 8.5 0.5 1 1 57.079 57.079 2 0.044142 16501 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.565 38.746 127.3 142.54 124.94 146.52 182.2 133.38 120 144 130 144 185 130 1 1 1 1 1 1 8413 6087 2765 5857 14085;14086 16200;16201 16201 2 FFTSSTSLTLK Unmodified 1230.6496 0.64960415 2528 Q8CEC0 Nup88 Nuclear pore complex protein Nup88 yes yes 0 0 0 0 11.5 0.5 1 1 73.415 73.415 3 0.0048354 21548 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.784 29.992 69.45 0 49.525 30.269 17.805 79.442 65 0 46 28 19 75 2 0 1 1 1 2 7189.2 6088 2528 5858 14087;14088 16202;16203 16202 2 FFVANTAK Unmodified 896.4756 0.47560295 3396 Q9Z2I8;A0A0N4SWD1 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes no 0 0 0 0 10 0 1 59.8 59.8 2 0.0078284 15980 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.44 56.322 66.106 0 70.62 58.866 75.093 79.939 62 0 68 59 77 77 1 0 1 1 1 1 5014.2 6089 3396 5859 14089 16204 16204 1 FFVAPFPEVFGK Unmodified 1383.7227 0.72270951 653 CON__P02662 yes yes 0 0 0 0 9.6 4.36 1 2 1 1 95.028 95.028 2;3 9.5114E-14 30973 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.94 95.526 227.46 27.469 48.954 87.621 126.94 39.442 213 28 47 81 123 37 6 1 2 2 3 2 41843 + 6090 653 5860 14090;14091;14092;14093;14094 16205;16206;16207;16208;16209;16210;16211 16207 7 FFVGGNWK Unmodified 953.47594 0.4759373 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 0 0 0 5.89 5.49 5 1 2 1 72.255 72.255 2;3 0.0022685 26798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.925 68.002 6689.7 6304.8 8175.7 6124.1 8745.3 8235.8 6307 6478 8170 6140 8893 7960 6 9 7 7 8 9 1794000 6091 1405 5861 14095;14096;14097;14098;14099;14100;14101;14102;14103 16212;16213;16214;16215;16216;16217;16218;16219;16220;16221;16222;16223;16224 16224 13 FFVNFPSAK Unmodified 1055.544 0.54401687 2984 Q9CX80 Cygb Cytoglobin yes yes 0 0 0 0 9 4.64 1 1 2 76.067 76.067 2;3 0.0047819 20308 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.676 52.555 99.089 35.61 87.54 68.565 121.39 185.22 93 37 84 65 120 177 3 1 2 2 3 5 51251 6092 2984 5862 14104;14105;14106;14107 16225;16226;16227;16228;16229 16229 5 FFWGNAETLK Unmodified 1211.5975 0.597509 435 A6PWC3;A2A9Q2;Q8BHG1;Q3V3G9 Nrd1 Nardilysin yes no 0 0 0 0 10 0 1 77.329 77.329 2 0.0042492 23592 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.655 39.507 0 19.595 37.155 38.227 0 59.696 0 19 37 37 0 56 0 1 1 1 0 1 11699 6093 435 5863 14108 16230 16230 1 FFYQFLLGNER Unmodified 1432.7139 0.71393574 1068 G3UY33;Q8C754 Vps52 Vacuolar protein sorting-associated protein 52 homolog yes no 0 0 0 0 12 0 1 90.267 90.267 2 0.0043388 25698 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.551 28.12 0 9.3256 14.98 15.502 0 0 0 9 15 15 0 0 0 1 1 1 0 0 1960.6 6094 1068 5864 14109 16231 16231 1 FFYSQGAQAR Unmodified 1173.5567 0.55670682 1907 Q2M3X8 Phactr1 Phosphatase and actin regulator 1 yes yes 0 0 0 0 10.5 0.5 1 1 53.006 53.006 2 3.7816E-05 12749 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.33 90.577 59.728 0 60.55 91.346 124.33 77.02 56 0 60 88 128 74 1 0 1 1 2 1 15807 6095 1907 5865 14110;14111 16232;16233 16233 2 FGALTAEK Unmodified 835.44397 0.44396847 3319 Q9WTL7 Lypla2 Acyl-protein thioesterase 2 yes yes 0 0 0 0 10.3 1.89 2 1 57.674 57.674 2;3 0.011446 16871 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.973 13.906 168.17 330.2 190.43 261.69 260.87 458.4 158 321 176 241 260 437 1 2 1 2 2 3 34782 6096 3319 5866 14112;14113;14114 16234;16235;16236 16235 3 FGANAILGVSLAVCK Deamidation (N) 1519.8068 0.80684985 1398;1399 P17182;Q6PHC1;B0QZL1;Q5SX59;P17183;A0A0N4SUX5;D3Z2S4 Eno1;Eno3;Eno2 Alpha-enolase;Enolase;Gamma-enolase no no 0 1 0 0 8.5 4.39 1 1 1 1 86.355 86.355 3 7.0031E-05 27234 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.879 50.926 43.525 49.653 106.92 77.762 49.917 84.911 41 50 102 74 52 80 2 2 2 2 2 2 6942.1 6097 1398;1399 5867 14115;14116;14117;14118 16237;16238;16239;16240 16239 481 4 FGANAILGVSLAVCK Unmodified 1518.8228 0.82283426 1398;1399 P17182;Q6PHC1;B0QZL1;Q5SX59;P17183;A0A0N4SUX5;D3Z2S4 Eno1;Eno3;Eno2 Alpha-enolase;Enolase;Gamma-enolase no no 0 0 0 0 7.18 5.83 8 3 6 98.883 98.883 3 2.0429E-07 45837 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.71 74.327 103.44 129.57 115.93 139.37 119.8 111.35 97 128 115 133 119 106 6 8 6 7 5 6 30398 6098 1398;1399 5867 14119;14120;14121;14122;14123;14124;14125;14126;14127;14128;14129;14130;14131;14132;14133;14134;14135 16241;16242;16243;16244;16245;16246;16247;16248;16249;16250;16251;16252;16253;16254;16255;16256;16257;16258;16259 16257 19 FGAPPHAGGGIGLER Unmodified 1434.7368 0.73679645 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7 0 1 49.956 49.956 3 0.0010556 14511 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.912 38.28 38.801 55.222 104.41 54.985 0 69.29 37 56 102 56 0 65 1 1 1 1 0 1 7907.2 6099 2803 5868 14136 16260 16260 1 FGAQNESLLPSILVLLQR Unmodified 1997.131 0.13096118 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 0 11.5 0.5 1 1 102.13 102.13 3 0.00059725 33808 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.708 39.074 0 0 9 7 0 0 0 0 9 7 0 0 0 0 1 1 0 0 4816.5 6100 3265 5869 14137;14138 16261;16262 16261 2 FGAVFLWDTGSSVGEITGHNK Unmodified 2221.0804 0.080382171 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 11.3 1.25 1 1 1 82.625 82.625 3;4 1.2073E-09 26294 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.794 55.232 0 0 74 71.045 0 59.696 0 0 74 65 0 56 0 0 1 1 0 1 13794 6101 1263 5870 14139;14140;14141 16263;16264;16265 16263 3 FGCRDPVR Unmodified 1005.4814 0.48143338 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 8 0 1 33.997 33.997 3 0.063248 6635 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.968 16.24 0 97.761 71.227 66.8 0 0 0 93 74 65 0 0 0 1 1 1 0 0 7011.9 6102 2555 5871 14142 16266 16266 1 FGDEDITWQDEHSAPFSWETR Unmodified 2552.088 0.088046324 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 0 4 0 1 74.097 74.097 3 9.3523E-06 27264 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.672 40.058 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2319 6103 2496 5872 14143 16267 16267 1 FGDILHVINASDDEWWQAR Unmodified 2271.0709 0.070880117 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8 Dlg1 Disks large homolog 1 yes no 0 0 0 0 7 0 1 91.324 91.324 3 0.0098135 33804 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.552 26.607 9.657 0 0 10.93 0 0 9 0 0 10 0 0 1 0 0 1 0 0 1385.5 6104 767 5873 14144 16268 16268 1 FGDMQEIIQNFVR Unmodified 1595.7766 0.77661235 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BQM5;A0A2I3BPW0;A0A2I3BPL1;A0A2I3BS20 Ndrg2 Protein NDRG2 no no 0 0 0 0 11.1 1.36 1 2 2 1 2 95.679 95.679 2;3 3.3275E-11 34310 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.71 95.318 109.96 9.576 94.144 26.791 157.23 96.706 103 9 88 28 154 93 5 1 3 2 5 3 94092 6105 3277;377 5874 14145;14146;14147;14148;14149;14150;14151;14152 16269;16270;16271;16272;16273;16274;16275;16276;16277 16270 9 FGEVVDCTLK Unmodified 1166.5642 0.56415996 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 8.25 2.77 1 2 1 65.502 65.502 2;3 0.00021758 23478 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.807 0 98.125 64.866 135.15 96.189 92.202 77.587 92 65 130 93 92 74 2 2 2 2 2 1 16173 6106 2079 5875 14153;14154;14155;14156 16278;16279;16280;16281 16281 4 FGEYCSGEDGK Unmodified 1247.4765 0.47646716 2630 Q8R0A7;Q3TA40;Q8BQB5;D3YUS2 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 5 0 1 50.93 50.93 2 0.050542 16460 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.123 43.434 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 1895.1 6107 2630 5876 14157 16282 16282 1 FGFAIGSQTAR Unmodified 1153.588 0.58800695 1047 Q3TM89;F8WI88;Q6P8I4;D3YWA4 Pcnp PEST proteolytic signal-containing nuclear protein yes no 0 0 0 0 11 0 1 61.953 61.953 2 0.00068283 16469 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.428 65.826 0 0 0 0 123.26 65.773 0 0 0 0 120 65 0 0 0 0 1 1 9869.9 6108 1047 5877 14158 16283 16283 1 FGFDPFISSNIQYFLDR Unmodified 2064.9945 0.99452728 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 9 0 1 101.88 101.88 3 0.053515 36126 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 30.107 13.801 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1602.7 6109 2806 5878 14159 16284 16284 1 FGFGFGGTGK Unmodified 973.46577 0.46576654 2744 Q91VR5;A0A1Y7VM48 Ddx1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 0 11.5 0.5 1 1 69.305 69.305 2 0.00012568 17529 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.51 74.407 172.4 403.02 146.22 412.46 445.01 196.36 162 392 148 393 450 190 1 2 1 2 2 1 49750 6110 2744 5879 14160;14161 16285;16286 16286 2 FGFLQEFSK Unmodified 1101.5495 0.54949617 2124 Q61330 Cntn2 Contactin-2 yes yes 0 0 0 0 11 0 1 81.664 81.664 3 0.0038671 25375 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.305 39.262 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 1993.2 6111 2124 5880 14162 16287 16287 1 FGFLTVTNLGVENMNHYK Unmodified 2083.0197 0.01969617 1184 O35239 Ptpn9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 0 11 0 1 79.505 79.505 3 0.0016234 24477 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.955 28.716 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2008.4 6112 1184 5881 14163 16288 16288 1 FGFPAFSGISR Unmodified 1184.5978 0.59784335 2992 Q9CY64 Blvra Biliverdin reductase A yes yes 0 0 0 0 8 4.97 1 1 1 76.861 76.861 2 0.0032922 20462 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.275 29.151 149.18 92.071 97.591 145.84 137.44 156.77 140 93 102 140 139 149 3 2 3 3 2 3 28957 6113 2992 5882 14164;14165;14166 16289;16290;16291;16292;16293 16292 5 FGFQAPNVTFLHGR Unmodified 1589.8103 0.81029574 2761 Q91WU5 As3mt Arsenite methyltransferase yes yes 0 0 0 0 11 0 1 68.65 68.65 3 0.00047939 19501 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.285 38.949 0 69.16 0 59.981 65.235 0 0 65 0 56 65 0 0 1 0 1 1 0 6947.3 6114 2761 5883 14167 16294 16294 1 FGFTFNCDIK Unmodified 1247.5645 0.56449431 754 D3Z263;Q9D7H3 Rtca;RtcA RNA 3'-terminal phosphate cyclase yes no 0 0 0 0 9.5 0.5 1 1 75.313 75.313 3 0.013761 25132 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.108 26.121 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2175.4 6115 754 5884 14168;14169 16295;16296 16295 2 FGFYEVFK Unmodified 1035.5066 0.50656873 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 12 0.816 1 1 1 81.395 81.395 2 0.013657 31370 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.833 49.357 285.54 64.59 104.98 151.23 102.51 108.73 267 70 102 148 98 102 2 1 1 2 1 1 26041 6116 2715 5885 14170;14171;14172 16297;16298;16299 16299 3 FGGALDAAAK Unmodified 919.47633 0.47633123 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 10.5 2.5 1 1 57.457 57.457 2 2.5094E-13 17547 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.57 73.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6117 2020 5886 14173;14174 16300;16301 16300 2 FGGGSVELLK Unmodified 1005.5495 0.54949617 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 7.5 0.5 1 1 67.312 67.312 2 0.0013443 22000 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.265 29.303 172.29 53.055 213.32 75.366 157.83 237.48 162 56 204 74 162 227 2 1 2 1 2 2 13199 6118 2435 5887 14175;14176 16302;16303 16303 2 FGGLTTDFATALK Unmodified 1340.6976 0.69761697 3437 yes no 0 0 0 0 10 0 1 67.02 67.02 3 0.0025228 19233 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.344 3.7042 0 151.72 343.99 162.03 0 268.63 0 148 333 167 0 252 0 1 1 1 0 1 174400 + 6119 3437 5888 14177 16304 16304 1 FGGNPGGFGNQGGFGNSR Unmodified 1725.7608 0.76077937 2793 Q921F2;A0A087WR97 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 9 0 1 57.078 57.078 3 1.6133E-05 16531 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.27 50.132 88.692 72.756 0 0 0 0 83 74 0 0 0 0 1 1 0 0 0 0 7098.8 6120 2793 5889 14178 16305 16305 1 FGGPGAR Unmodified 660.33436 0.33435844 1372 P14131 Rps16 40S ribosomal protein S16 yes yes 0 0 0 0 8 0 1 34.412 34.412 2 0.030502 6796 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.513 77.653 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6121 1372 5890 14179 16306 16306 1 FGGPVHHQAQR Unmodified 1232.6163 0.61628738 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 8 0 1 25.562 25.562 3 0.0005054 3784 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.939 55.088 3.1879 6.169 0 3.279 0 0 3 6 0 3 0 0 1 1 0 1 0 0 646.71 6122 1812 5891 14180 16307 16307 1 FGGSGSQVDSAR Unmodified 1166.5316 0.53161428 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 5.5 0.5 1 1 38.066 38.066 2 2.5462E-05 9743 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.898 55.815 20.387 0 0 20.767 0 78.884 19 0 0 19 0 74 1 0 0 1 0 2 5438.7 6123 2697 5892 14181;14182 16308;16309 16309 2 FGHTFCK Unmodified 895.40106 0.4010578 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 11 1.63 1 1 1 45.005 45.005 3 0.0038826 13690 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.43 72.18 912.64 730.37 1038 1036.4 1113.2 1043.8 859 744 1038 1024 1144 1009 2 2 2 2 2 2 67459 6124 1542 5893 14183;14184;14185 16310;16311;16312 16312 3 FGIDDQDFQNSLTR Unmodified 1654.7587 0.75871368 1244 O70172;F6RJE8 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes no 0 0 0 0 9 4 1 1 70.124 70.124 2 0.00015006 25496 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.245 59.724 70.502 27.052 30.145 0 56.581 87.929 66 28 28 0 56 84 2 1 1 0 1 2 6419.5 6125 1244 5894 14186;14187 16313;16314 16313 2 FGIDDQDYQNSVTR Unmodified 1656.738 0.73797824 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 6.75 3.63 1 2 1 58.426 58.426 2;3 1.4034E-05 20061 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.49 91.226 128.91 90.373 114.39 49.921 74.484 138.58 121 93 112 47 75 130 2 2 2 2 2 2 15327 6126 2334 5895 14188;14189;14190;14191 16315;16316;16317;16318 16317 4 FGIEAFSDCLR Unmodified 1313.6074 0.60742176 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 75.695 75.695 2 0.00083529 26616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.095 69.102 118.33 102.74 67.988 80.03 205.3 151.91 111 102 65 74 203 148 3 3 1 2 3 3 27449 6127 2336 5896 14192;14193;14194 16319;16320;16321;16322 16319 4 FGIGDGNLQYYLYNWK Unmodified 1949.9312 0.93119874 1249 O70310 Nmt1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 0 10 0 1 92.109 92.109 3 0.0038166 29903 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.791 27.106 9.5067 14.031 13.369 19.97 0 0 9 14 14 19 0 0 1 1 1 1 0 0 4165.3 6128 1249 5897 14195 16323 16323 1 FGIHNYK Unmodified 877.44464 0.44463717 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 10.5 0.5 1 1 45.607 45.607 3 0.0024245 10083 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.01 75.142 401.19 393.71 225.55 186.37 127.22 279.93 377 399 232 185 139 266 2 2 1 1 1 1 25600 6129 1388 5898 14196;14197 16324;16325 16324 2 FGLEGCEVLIPALK Unmodified 1544.8273 0.82725094 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 8 1 1 1 86.628 86.628 3 9.0625E-05 31836 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.607 48.371 0 19.743 28.285 18.546 28.436 0 0 19 28 19 28 0 0 1 1 1 1 0 7092 6130 2074 5899 14198;14199 16326;16327 16326 2 FGLEGCEVMIPALK Unmodified 1562.7837 0.78367156 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 8 0 1 84.359 84.359 3 6.7611E-05 30114 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.496 58.143 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6131 628 5900 14200 16328 16328 1 FGLEGLLLSPTYLSLR Unmodified 1777.9978 0.99782174 475 A2AJA9 Gm996 Uncharacterized protein C9orf172 homolog yes yes 0 0 0 0 12 0 1 99.603 99.603 3 0.022097 28346 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 36.593 13.714 0 7.448 0 0 9.24 5.0663 0 7 0 0 9 5 0 1 0 0 1 1 1461 6132 475 5901 14201 16329 16329 1 FGLFAPIHK Unmodified 1028.5807 0.58073672 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 6.5 5.5 1 1 68.405 68.405 3 0.0012066 16996 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.191 54.401 237.7 187.6 107.2 63.255 74.498 256.91 223 187 102 65 74 241 2 1 1 1 1 1 38614 6133 3358 5902 14202;14203 16330;16331 16331 2 FGLFTPGSR Unmodified 980.50797 0.50796571 1528 P36552 Cpox Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 66.115 66.115 2 0.0056749 18281 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.75 39.724 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 10296 6134 1528 5903 14204;14205 16332;16333 16332 2 FGLHLPK Unmodified 810.47521 0.47520902 50 F6W8I0;A0A0A0MQI6;A0A0A0MQP0 Yjefn3 YjeF N-terminal domain-containing protein 3 yes no 0 0 0 0 11 0 1 57.04 57.04 3 0.049435 14401 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.347 34.829 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 0 6603.8 6135 50 5904 14206 16334 16334 1 FGLSVGHHLGK Unmodified 1150.6247 0.6247268 2180 Q64669 Nqo1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 0 11 0 1 48.652 48.652 4 0.002696 11020 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.37 39.588 78.755 62.924 55.338 0 0 0 74 65 55 0 0 0 1 1 1 0 0 0 3702.6 6136 2180 5905 14207 16335 16335 1 FGLVFDHVVGIVEVINSK Deamidation (N) 1972.067 0.066963938 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 1 0 0 11.5 0.5 1 1 101.33 101.33 3;4 1.5407E-05 33442 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.729 53.044 16.036 11.687 0 50.278 0 55.432 15 12 0 46 0 52 1 1 0 1 0 2 4094.7 6137 2996 5906 14208;14209 16336;16337 16336 1038 2 FGLVFDHVVGIVEVINSK Unmodified 1971.0829 0.082948354 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 12 0 1 101.08 101.08 4 2.0362E-07 28735 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.73 69.897 17.075 18.507 15.148 14 23.563 21.863 16 18 14 14 23 21 2 1 1 1 2 2 1120.4 6138 2996 5906 14210 16338;16339;16340;16341 16340 4 FGLYLPK Unmodified 836.47963 0.47962569 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 7.6 5.43 2 1 1 1 73.009 73.009 2;3 0.02025 18801 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.84 65.891 1701.5 515.67 1211.7 1989.7 260.87 891.04 1594 550 1181 1891 296 840 7 4 6 9 4 6 227650 6139 2396 5907 14211;14212;14213;14214;14215 16342;16343;16344;16345;16346;16347;16348;16349;16350 16347 9 FGMTPSK Unmodified 766.36836 0.36836069 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9 0 1 51.775 51.775 2 0.037575 13981 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.229 30.639 220.09 0 159.03 0 219.26 133.39 206 0 148 0 214 131 1 0 1 0 1 1 13921 6140 1875 5908 14216 16351 16351 1 FGNDVQHFK Unmodified 1090.5196 0.51959303 585 Q60631;B1AT92 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 7 0 1 50.173 50.173 3 0.0011681 14572 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.465 55.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6141 585 5909 14217 16352 16352 1 FGNPAELHGPK Unmodified 1165.588 0.58800695 457 B1AV20;A2AFI8;B9EI38;Q80XA6 Reps2 RalBP1-associated Eps domain-containing protein 2 yes no 0 0 0 0 8 0 1 49.326 49.326 3 0.014829 13614 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.288 17.481 79.402 0 0 100.89 40.116 97.993 74 0 0 93 46 93 1 0 0 1 1 1 2269.4 6142 457 5910 14218 16353 16353 1 FGNPLLVQDVESYDPVLNPVLNR Unmodified 2597.349 0.34895246 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 94.962 94.962 3 1.4405E-15 34314 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.062 73.331 5 9.576 19 12.605 27.161 45.063 5 9 19 12 28 43 1 1 1 2 2 2 16878 6143 3204 5911 14219;14220;14221;14222;14223 16354;16355;16356;16357;16358 16356 5 FGNTTFK Unmodified 813.4021 0.40210366 140 E9Q026;A0A0N4SW93;Q7TPS5;A0A0N4SW69;A0A0N4SVN0 C2cd5 C2 domain-containing protein 5 yes no 0 0 0 0 9 0 1 54.516 54.516 2 0.046739 15269 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.213 41.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6144 140 5912 14224 16359 16359 1 FGPALSVK Unmodified 817.46979 0.46978929 1484 P29341;Q9D4E6 Pabpc1;Pabpc6 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 0 10 0 1 61.414 61.414 2 0.014064 16640 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.095 4.9763 98.798 76.763 101.42 86.218 92.263 122.09 93 80 102 86 96 117 1 1 1 1 1 1 26406 6145 1484 5913 14225 16360 16360 1 FGPFDLAAIPIGAYEPR Unmodified 1832.9461 0.94612052 2400 Q8BH82 Napepld N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D yes yes 0 0 0 0 8.5 0.5 1 1 95.295 95.295 3 0.0048346 34050 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.095 22.771 9 14.657 14.269 0 0 0 9 14 14 0 0 0 1 1 1 0 0 0 3866 6146 2400 5914 14226;14227 16361;16362 16362 2 FGPSQTPAAFLSALLPSQPPPVAVNALGLPK Unmodified 3084.7012 0.70119279 3199 Q9ET54 Palld Palladin yes yes 0 0 0 0 12 0 1 107.3 107.3 5 0.00082302 29541 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.66 24.953 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 687.49 6147 3199 5915 14228 16363 16363 1 FGPYYTEPVIAGLDPK Unmodified 1765.8927 0.89268797 3311 Q9R1P1;D3YUM8 Psmb3;Gm4950 Proteasome subunit beta type-3;Proteasome subunit beta type yes no 0 0 0 0 7 0 1 81.85 81.85 3 0.0006664 29556 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.828 37.085 69.357 0 65.246 106.28 70.211 67.286 65 0 65 102 74 65 1 0 1 1 1 1 10914 6148 3311 5916 14229 16364 16364 1 FGQDIISPLLSVK Unmodified 1415.8024 0.8024164 2448 Q8BRF7 Scfd1 Sec1 family domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 87.227 87.227 3 3.6067E-05 28122 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.592 73.738 29.892 39.368 25.604 29.078 28.291 52.493 28 37 25 28 28 50 1 1 1 1 1 2 8011.7 6149 2448 5917 14230;14231 16365;16366 16365 2 FGQGGAGPVGGQGPR Unmodified 1340.6585 0.65854613 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 7.5 0.5 1 1 44.17 44.17 2 1.2312E-21 11147 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.57 109.73 20.387 0 0 0 49.162 28 19 0 0 0 47 28 1 0 0 0 1 1 4748.2 6150 2724 5918 14232;14233 16367;16368 16368 2 FGQWADSR Unmodified 965.43553 0.43552905 3402;2830;3262 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9;Q99JP6;Q501M9;Q9QWW1;E9Q4F9;A0A140LHR9;A0A140LJ06 Homer1;Homer3;Homer2 Homer protein homolog 1;Homer protein homolog 3;Homer protein homolog 2 no no 0 0 0 0 8 0 1 53.896 53.896 2 0.038721 15652 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.224 41.531 108.84 120.34 0 0 0 108.73 102 120 0 0 0 102 1 1 0 0 0 1 8271.2 6151 3402;2830;3262 5919 14234 16369 16369 1 FGSCVPHTTRPK Unmodified 1385.6874 0.68740341 407;690;767 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0;D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg4;Dlg2;Dlg1 Disks large homolog 4;Disks large homolog 2;Disks large homolog 1 no no 0 0 0 1 11.5 0.5 1 1 38.043 38.043 4 0.0021246 5825 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.198 44.512 32.088 87.947 83.335 74.762 119.42 125.58 30 86 83 75 120 121 1 2 1 2 1 2 7959 6152 407;690;767 5920 14235;14236 16370;16371 16371 2 FGSLLPIHPVTSG Unmodified 1323.7187 0.71868677 1654 P58389;A2AWE9;B7ZDE0;A2AWF0 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 10.5 1.12 1 1 1 1 77.345 77.345 2 0.00033269 23267 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.692 68.52 208.15 183.41 27.643 201.49 47.245 69.29 195 186 28 186 46 65 4 4 1 3 2 1 82840 6153 1654 5921 14237;14238;14239;14240 16372;16373;16374;16375 16374 4 FGSQASQK Unmodified 851.41373 0.41373097 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 8 0.816 1 1 1 39.102 39.102 2 0.011655 9604 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.93 50.835 138.79 138.54 92.365 163.55 193.44 57.359 130 139 88 158 194 56 1 1 1 2 2 1 16699 6154 3453 5922 14241;14242;14243 16376;16377;16378 16376 3 FGTALSNR Unmodified 864.44537 0.44536545 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 8 0 1 46.043 46.043 2 0.042225 12014 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.799 34.189 87.963 100.95 98.721 115.44 0 0 83 102 102 111 0 0 1 1 1 1 0 0 16000 6155 20;2354 5923 14244 16379 16379 1 FGTLLSGSWDTTAK Unmodified 1482.7355 0.73545904 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 10 0 1 79.576 79.576 2 0.0057699 24866 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.367 42.041 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 2653.1 6156 1466 5924 14245 16380 16380 1 FGTTVPFTSR Unmodified 1111.5662 0.56620887 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 9.5 0.5 1 1 61.142 61.142 2 2.0265E-05 16576 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.94 92.793 168.08 184.01 89.243 182.96 217.58 181.41 158 185 93 176 222 176 2 2 1 2 2 2 30574 6157 3241 5925 14246;14247 16381;16382 16382 2 FGTVNIVHPK Unmodified 1110.6186 0.61857879 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 10.5 0.5 1 1 53.883 53.883 3 0.001474 13083 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.17 50.557 245.66 0 125.35 91.787 127.13 134.95 241 0 120 93 130 130 2 0 1 1 1 1 43314 6158 2840 5926 14248;14249 16383;16384 16384 2 FGVEQDR Unmodified 849.39808 0.39808091 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 5 0 1 41.233 41.233 2 0.011857 11743 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.953 33.787 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6159 2075 5927 14250 16385 16385 1 FGVEQDVDMVFASFIR Unmodified 1858.8924 0.89237039 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 9 2.13 1 2 3 1 1 1 1 1 103.79 103.79 2;3 1.4773E-17 37176 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.4 112.19 132.43 94.219 70.739 69.4 67.965 82.679 125 96 68 64 66 79 7 9 6 5 6 6 50607 6160 1609 5928 14251;14252;14253;14254;14255;14256;14257;14258;14259;14260;14261 16386;16387;16388;16389;16390;16391;16392;16393;16394;16395;16396;16397;16398;16399;16400;16401;16402;16403;16404 16389 19 FGVIFAGAQK Unmodified 1036.5706 0.57056597 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 10.2 4.62 1 2 2 72.092 72.092 2;3 5.7269E-06 18612 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.98 83.535 236.25 198.45 160.01 198.6 265.94 252.5 222 204 158 195 268 241 3 3 2 4 4 3 88645 6161 2840 5929 14262;14263;14264;14265;14266 16405;16406;16407;16408;16409;16410 16408 6 FGVIYQK Unmodified 853.46979 0.46978929 488;243 A2ALS5;A2ALS4;A2ALS3;Q5SVL6;A0A171EBK8 Rap1gap;Rap1gap2 Rap1 GTPase-activating protein 1;Rap1 GTPase-activating protein 2 no no 0 0 0 0 10.5 0.5 1 1 61.511 61.511 2 0.02025 16192 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.84 60.271 147.8 105.84 569.06 133.9 0 340.05 139 111 538 130 0 319 1 1 2 1 0 1 54463 6162 488;243 5930 14267;14268 16411;16412 16412 2 FGVLFQDDR Unmodified 1095.5349 0.53490874 330 A0A1W2P7X0;E9QMV2;Q4KML4 Abracl Costars family protein ABRACL yes no 0 0 0 0 8.5 0.5 1 1 71.35 71.35 2 0.0023221 23887 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.531 60.425 59.808 55.551 0 80.882 0 93.808 56 56 0 74 0 88 1 1 0 1 0 1 10959 6163 330 5931 14269;14270 16413;16414 16413 2 FGVPIPIFIK Unmodified 1129.69 0.68995282 294 D3Z169;E9PZ19;A0A1L1SR84 Igsf9b yes no 0 0 0 0 3.75 4.76 3 1 93.657 93.657 2;3 0.0019498 32738 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.621 41.846 15.008 21.831 0 15.302 0 6.396 14 22 0 14 0 6 2 2 0 2 0 1 3081.3 6164 294 5932 14271;14272;14273;14274 16415;16416;16417;16418 16415 4 FGVPLGYGGPHAAFFAVK Unmodified 1833.9566 0.95662563 2749 Q91W43 Gldc Glycine dehydrogenase (decarboxylating), mitochondrial yes yes 0 0 0 0 11.5 0.5 2 2 77.452 77.452 3;4 5.9669E-08 20832 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.261 52.862 69.431 0 47.659 107.79 45.344 0 66 0 46 102 46 0 2 0 1 2 1 0 11865 6165 2749 5933 14275;14276;14277;14278 16419;16420;16421;16422 16422 4 FGYQFTK Unmodified 889.4334 0.43340378 3232 Q9JKK7 Tmod2 Tropomodulin-2 yes yes 0 0 0 0 11.3 1.25 1 1 1 61.259 61.259 2 0.024299 21669 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.99 58.865 641.32 572.36 472.65 1077.3 849.32 850.79 603 586 479 1026 870 811 2 2 1 3 2 2 115880 6166 3232 5934 14279;14280;14281 16423;16424;16425 16425 3 FGYVDFESAEDLEK Unmodified 1647.7304 0.73043325 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 9 4 1 1 78.771 78.771 3 2.9229E-11 29647 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.01 89.674 157.44 0 49.276 29.528 125.21 0 147 0 46 28 121 0 2 0 1 1 2 0 10232 6167 1333 5935 14282;14283 16426;16427 16426 2 FHADFLLQHVK Unmodified 1353.7194 0.71935547 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 0 10.5 1.5 1 2 1 62.251 62.251 3;4 2.8911E-06 17077 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.52 80.918 166.86 250.21 334.85 215.66 121.24 127.2 157 251 333 213 121 121 2 4 4 3 2 2 32112 6168 2636 5936 14284;14285;14286;14287 16428;16429;16430;16431 16429 4 FHALGPIYYR Unmodified 1235.6451 0.64512789 1516 P35282 Rab21 Ras-related protein Rab-21 yes yes 0 0 0 0 11 0 1 56.168 56.168 3 0.0063459 13973 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.432 28.419 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 35612 6169 1516 5937 14288 16432 16432 1 FHEICSNLVK Unmodified 1245.6176 0.61759251 3236 Q9JKW0;A0A0U1RPY6 Arl6ip1 ADP-ribosylation factor-like protein 6-interacting protein 1 yes no 0 0 0 0 8 0 1 54.249 54.249 3 0.0046703 15814 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.699 22.74 69.745 0 0 50.278 0 78.884 65 0 0 46 0 74 1 0 0 1 0 1 8281.5 6170 3236 5938 14289 16433 16433 1 FHEQFIVR Unmodified 1074.5611 0.56106391 783 E9QAS9;E9QAT0;D3Z6U8;E9QNF5;Q6AXB7;E9QAS8;P35922 Fmr1 Fragile X mental retardation protein 1 homolog yes no 0 0 0 0 8 0 1 48.958 48.958 3 0.04135 13381 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.442 17.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6171 783 5939 14290 16434 16434 1 FHFTHTIQQK Unmodified 1285.6568 0.65675521 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 10 0 1 44.79 44.79 4 0.000106 9676 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.502 59.765 108.09 98.833 143.92 0 150.56 123.62 102 102 139 0 148 120 1 1 1 0 1 1 12597 6172 20;2354 5940 14291 16435 16435 1 FHIGCEK Unmodified 889.41162 0.41162248 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 8 0 1 44.865 44.865 3 0.056578 11482 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.994 15.06 99.789 0 0 71.045 0 0 93 0 0 65 0 0 1 0 0 1 0 0 3668.5 6173 1813 5941 14292 16436 16436 1 FHKPITMTIPVPK Unmodified 1507.8585 0.85849149 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 12 0 1 62.092 62.092 4 0.00017859 14881 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.479 54.245 147.5 192.42 242.33 137.87 220.04 200.53 139 194 241 139 223 194 1 2 2 1 2 2 20810 6174 3449;3451 5942 14293 16437;16438 16437 2 FHLCSVATR Unmodified 1089.5389 0.53894826 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 9.5 0.5 1 1 44.832 44.832 3 0.0012327 10778 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.755 57.702 217.54 145.45 104.43 0 277.4 85.248 204 149 102 0 268 83 3 2 1 0 3 1 24487 6175 1400 5943 14294;14295 16439;16440;16441 16439 3 FHLCSVPTR Unmodified 1115.5546 0.55459833 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 9 0 1 46.114 46.114 3 0.0011195 11283 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.645 53.269 49.358 0 0 58.898 122.81 0 46 0 0 56 120 0 1 0 0 1 1 0 22190 6176 1401 5944 14296 16442 16442 1 FHLLVANR Unmodified 968.55558 0.55558461 2058 Q5SRX1;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 12 0.816 1 1 1 51.331 51.331 3 0.001387 10913 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.42 62.212 79.061 19 57.233 96.529 90.855 57.9 74 19 56 93 93 56 1 1 1 2 2 1 78008 6177 2058 5945 14297;14298;14299 16443;16444;16445;16446 16445 4 FHMVDGNVTGEFTDLVPEK Unmodified 2134.0041 0.004105685 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 6 0 2 76.682 76.682 3;4 4.0641E-08 27931 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.723 57.129 50.244 85.988 0 49.593 94.342 19.168 47 84 0 46 93 19 2 3 0 1 3 1 7812 6178 2420 5946 14300;14301 16447;16448;16449 16447 3 FHNLNAGPSR Unmodified 1111.5523 0.55229014 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 35.402 35.402 3 7.3097E-06 6889 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.63 101.66 0 97.205 169.53 0 74.768 76.75 0 93 167 0 74 74 0 1 2 0 1 1 39476 6179 2179 5947 14302;14303 16450;16451 16451 2 FHQLDIDDPQSIR Unmodified 1582.774 0.77396981 2604 Q8K354;A0A338P797 Cbr3 Carbonyl reductase [NADPH] 3 yes no 0 0 0 0 6 0 1 56.29 56.29 3 0.00012444 18401 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.475 0 39.516 36.703 0 40.441 0 0 37 37 0 37 0 0 1 1 0 1 0 0 3992.5 6180 2604 5948 14304 16452 16452 1 FHQLDIDNPQSIR Unmodified 1581.79 0.78995423 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 6 1 1 1 54.639 54.639 3 6.8587E-05 18203 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.287 78.533 118.59 54.9 39.786 69.502 120.72 46.695 111 56 37 65 120 46 2 1 1 1 2 1 22021 6181 1582 5949 14305;14306 16453;16454 16453 2 FHQLILR Unmodified 925.54977 0.54977095 759 D3Z2V6;O08989 Mras Ras-related protein M-Ras yes no 0 0 0 0 11 0 1 49.559 49.559 3 0.0051055 11457 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.919 61.101 38.835 74.744 82.179 66.147 0 0 37 74 83 65 0 0 1 1 1 1 0 0 17582 6182 759 5950 14307 16455 16455 1 FHTITTSYYR Unmodified 1287.6248 0.62478638 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 11 0 1 46.923 46.923 3 0.027156 10425 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.308 8.587 98.927 171.02 0 131.16 0 218.53 93 167 0 120 0 205 1 1 0 1 0 1 15655 6183 1684 5951 14308 16456 16456 1 FHTVSGSK Unmodified 861.43447 0.43446642 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 9.5 0.5 1 1 35.629 35.629 3 0.012622 7002 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.019 31.061 181.71 132.53 186.51 156.11 0 153.5 171 139 187 153 0 144 1 1 1 1 0 1 11436 6184 1906 5952 14309;14310 16457;16458 16457 2 FHVEEEGK Unmodified 973.45051 0.45051041 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 0 0 0 7 3.54 1 1 1 1 42.129 42.129 3 0.00070008 12026 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.52 73.166 693.1 957.46 914.13 985.5 1034.4 881.77 653 950 929 967 1054 847 5 6 5 6 6 4 223780 6185 1334 5953 14311;14312;14313;14314 16459;16460;16461;16462;16463;16464;16465 16465 7 FHVEEEGKGK Unmodified 1158.5669 0.56693715 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 0 0 1 7.75 3.11 1 1 1 1 42.108 42.108 4 1.875E-05 10787 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.79 81.115 808.16 1957.1 2832.1 2191.4 1264.8 3006.3 761 1933 2820 2169 1311 2854 2 4 5 4 3 5 106700 6186 1334 5954 14315;14316;14317;14318 16466;16467;16468;16469;16470 16468 5 FHYLQVAFPGASDADLVPK Unmodified 2074.0524 0.052376507 849 E9PY16 Adap1 yes yes 0 0 0 0 10 0.816 1 1 1 78.282 78.282 3;4 4.3219E-07 24241 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.583 52.492 109.03 82.024 66.525 186.38 136.01 105.9 102 84 65 176 139 102 2 2 1 3 3 2 15501 6187 849 5955 14319;14320;14321 16471;16472;16473;16474 16473 4 FIAANDK Unmodified 777.4021 0.40210366 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A087WQE1;A0A286YCF5;J3QP84;A0A286YDB5;A0A286YD36 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 7 0 1 53.028 53.028 2 0.021996 15937 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.906 2.3565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6188 360 5956 14322 16475 16475 1 FIAAQGPK Unmodified 830.46504 0.46503826 1408;250 P18052;Q91V35;A0A2R8VHH6;A0A1B0GRT6;A0A1B0GRH2;P49446 Ptpra;Ptpre Receptor-type tyrosine-protein phosphatase alpha;Receptor-type tyrosine-protein phosphatase;Receptor-type tyrosine-protein phosphatase epsilon no no 0 0 0 0 10 0.816 1 1 1 51.755 51.755 2 0.0008774 12416 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 148.07 111.89 98.697 60.292 132.37 93.76 0 171.29 93 65 130 93 0 167 1 1 1 1 0 2 7027.7 6189 1408;250 5957 14323;14324;14325 16476;16477;16478 16477 3 FIAFSGEGQSLR Unmodified 1310.6619 0.66190017 1810 P70362 Ufd1l Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 0 9 0 1 66.16 66.16 3 0.013481 20872 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.28 26.535 0 0 40.034 0 46.807 38.106 0 0 37 0 46 37 0 0 1 0 1 1 2646.2 6190 1810 5958 14326 16479 16479 1 FIAGTGCLVR Unmodified 1092.575 0.57499942 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 10 0.816 1 1 1 59.738 59.738 2 2.4942E-06 17806 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 133.68 89.069 178.34 44.908 105.33 151.11 0 44.772 167 46 102 144 0 42 3 1 1 2 0 1 46329 6191 2547 5959 14327;14328;14329 16480;16481;16482 16480 3 FIAIGPSTTR Unmodified 1061.5869 0.58694431 1601 P51163 Uros Uroporphyrinogen-III synthase yes yes 0 0 0 0 11 0 1 59.768 59.768 2 0.0024796 15539 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.731 46.912 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 6365 6192 1601 5960 14330 16483 16483 1 FICEQEHEK Unmodified 1218.5339 0.53392246 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 6 0 1 42.482 42.482 3 0.0037295 11845 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.933 44.703 138.31 106.97 108.03 111.37 186.61 173.76 130 111 111 111 189 168 1 1 1 1 1 1 5828.2 6193 2137 5961 14331 16484 16484 1 FICGTQSIHK Unmodified 1189.5914 0.59137776 389 A0A2R8VHE4;E9PWY6;O88986 Gcat 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial yes no 0 0 0 0 10 0 1 49.812 49.812 3 0.0013032 11644 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.2 47.819 0 24.472 0 50.278 0 44.772 0 23 0 46 0 42 0 1 0 1 0 1 2647.4 6194 389 5962 14332 16485 16485 1 FICPPNRPFR Unmodified 1302.6655 0.66554576 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 1 12 0 1 52.187 52.187 3 0.0037898 11219 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.573 19.605 68.992 63.288 72.952 66.697 0 59.696 65 65 74 65 0 56 1 1 1 1 0 1 7518.7 6195 175 5963 14333 16486 16486 1 FICTSVPVDADMCAASVAAGGAEELR Unmodified 2696.2244 0.22442193 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 5 0 1 80.885 80.885 3 0.0015493 30593 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.78 33.523 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1171.9 6196 2160 5964 14334 16487 16487 1 FIDGEMLEGK Unmodified 1137.5376 0.53761086 2718 Q8VHL1 Setd7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 0 6 0 1 71.281 71.281 3 0.0395 25446 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.08 18.394 39.397 26.659 28.498 0 0 0 37 28 28 0 0 0 1 1 1 0 0 0 1901.7 6197 2718 5965 14335 16488 16488 1 FIDTSQFILNR Unmodified 1352.7089 0.70885036 3348 Q9WVA2;Q4FZG7 Timm8a1;Timm8a2 Mitochondrial import inner membrane translocase subunit Tim8 A;Putative mitochondrial import inner membrane translocase subunit Tim8 A-B yes no 0 0 0 0 10 1.87 1 1 1 1 77.45 77.45 2;3 5.1025E-08 23837 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.11 90.361 89.505 62.244 111.19 143.93 102.23 0 84 65 112 139 102 0 2 2 2 2 2 0 39369 6198 3348 5966 14336;14337;14338;14339 16489;16490;16491;16492 16491 4 FIDTTLAITGR Unmodified 1206.6608 0.66083754 1709 P62077 Timm8b Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 0 0 0 0 9 0 1 72.824 72.824 2 0.0029294 23976 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.652 41.856 0 47.653 77.209 0 0 69.29 0 46 74 0 0 65 0 1 1 0 0 1 6268.5 6199 1709 5967 14340 16493 16493 1 FIDTTSK Unmodified 810.41233 0.41233399 1467 P27659;A0A2R8VHN4;Q9CQ09;E9PWZ3 Rpl3;Rpl3l 60S ribosomal protein L3 yes no 0 0 0 0 8.5 0.5 1 1 52.858 52.858 2 0.023151 14486 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.47 55.495 0 138.32 0 139.85 119.1 0 0 130 0 130 120 0 0 1 0 1 1 0 16077 6200 1467 5968 14341;14342 16494;16495 16495 2 FIDVPTLCEMLNYTPSPSNNR Unmodified 2467.1512 0.15118063 2822 Q924M7 Mpi Mannose-6-phosphate isomerase yes yes 0 0 0 0 10 0 1 94.054 94.054 3 0.009074 30725 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.015 20.999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2310.6 6201 2822 5969 14343 16496 16496 1 FIEAGQFNDNLYGTSIQSVR Unmodified 2258.0968 0.096760517 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 0 7 0 1 76.174 76.174 3 5.1698E-11 26835 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.884 63.289 39.613 17.545 0 20.075 36.791 28.798 37 19 0 19 37 28 1 1 0 1 1 1 6677.7 6202 538 5970 14344 16497 16497 1 FIEAGQYNDNLYGTSVQSVR Deamidation (N) 2261.06 0.06004066 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 1 0 0 6 0 1 68.737 68.737 3 2.2162E-09 24167 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.015 66.851 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6203 690 5971 14345 16498 16498 195 1 FIEAGQYNDNLYGTSVQSVR Unmodified 2260.076 0.076025075 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 7 0 1 68.769 68.769 3 0.00083157 23409 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.278 23.272 0 9.576 0 20.037 38.828 0 0 9 0 19 38 0 0 1 0 1 1 0 4705.1 6204 690 5971 14346 16499 16499 1 FIEAGQYNSHLYGTSVQSVR Unmodified 2255.0971 0.097094868 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 8 0 1 58.656 58.656 3 3.8388E-13 17983 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.65 93.156 20.195 38.006 0 0 0 0 19 37 0 0 0 0 1 1 0 0 0 0 7344.6 6205 407 5972 14347 16500 16500 1 FIEDELQIPVK Unmodified 1329.718 0.71801807 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 5.5 0.5 1 1 79.45 79.45 3 0.0015024 29158 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.344 38.226 69.512 46.283 0 60.196 112.39 58.16 65 46 0 56 112 56 2 1 0 1 2 1 10486 6206 1558 5973 14348;14349 16501;16502 16502 2 FIEDTAAEK Unmodified 1022.492 0.49204087 157 A0A1L1SRW7;A0A1L1SS90;A0A0R4J050;A0A1L1SRL5;A0A1L1SRC1;Q99JW2;A0A087WPX1 Acy1 Aminoacylase-1 yes no 0 0 0 0 5 0 1 55.866 55.866 3 0.021894 18785 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.64 21.019 49.063 0 49.525 0 29.288 0 46 0 46 0 28 0 1 0 1 0 1 0 1825.5 6207 157 5974 14350 16503 16503 1 FIEGEVVSALGK Unmodified 1247.6762 0.67615325 878 E9Q0W6;E9Q4K0;Q8BL65 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 0 6.5 0.5 1 1 78.202 78.202 3 0.00020836 27714 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.848 49.861 19.974 27.677 45.954 46.16 73.305 57.604 19 28 46 46 74 56 1 1 1 1 1 1 3842.6 6208 878 5975 14351;14352 16504;16505 16505 2 FIEIAAR Unmodified 818.46504 0.46503826 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 8.5 0.5 1 1 59.624 59.624 2 0.0090417 18486 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.08 64.124 276.5 0 237.27 180.24 296.85 313.46 259 0 228 178 302 302 2 0 2 1 2 2 44014 6209 2714 5976 14353;14354 16506;16507 16506 2 FIFDCVSQEYGINPER Unmodified 1972.8989 0.89891233 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 6.5 0.5 1 1 81.581 81.581 3 1.1363E-05 29399 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.42 90.151 0 97.367 94.784 0 58.576 29.848 0 93 93 0 56 28 0 2 2 0 1 1 9528.1 6210 2547 5977 14355;14356 16508;16509 16509 2 FIFQSNPYFR Unmodified 1317.6506 0.6506072 2692 Q8VD63 Tspyl4 Testis-specific Y-encoded-like protein 4 yes yes 0 0 0 0 12 0 1 76.625 76.625 2 0.005363 20525 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.652 45.059 89.615 102.49 0 69.509 81.655 96.808 84 102 0 65 83 93 2 2 0 1 1 2 4758.5 6211 2692 5978 14357 16510;16511 16510 2 FIFTVTAR Unmodified 953.53345 0.53345218 64 A0A0A6YY37;A0A0A6YY09;A0A0A6YWY8;F8VPK8;A0A0A6YWM0 Pcdh9 yes no 0 0 0 0 12 0 1 69.925 69.925 2 0.013425 17722 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.251 53.248 44.856 41.663 0 50.278 0 39.442 42 42 0 46 0 37 1 1 0 1 0 1 5140.8 6212 64 5979 14358 16512 16512 1 FIGFCIQK Unmodified 1011.5212 0.52117293 163 A0A0R4J1F6;A0A0R4J085;Q3UHZ7;Q91YN5 Uap1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes no 0 0 0 0 12 0 1 73.88 73.88 2 0.014178 19295 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.89 47.757 69.57 34.677 0 0 77.404 0 65 37 0 0 74 0 1 1 0 0 1 0 3321.7 6213 163 5980 14359 16513 16513 1 FIGKPDVAYQLISAK Unmodified 1648.9188 0.91884314 2670 Q8R570;B2FDF6 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 1 11.2 1.09 1 2 1 74.511 74.511 3;4 0.00021061 22600 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.576 50.212 59.473 103.56 57.015 0 231.98 125.27 56 102 56 0 232 120 1 2 1 0 3 2 62551 6214 2670 5981 14360;14361;14362;14363 16514;16515;16516;16517 16514 4 FIHKPSLK Unmodified 968.58074 0.58073672 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 1 6.5 5.5 1 1 49.889 49.889 4 0.0076642 15279 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.213 54.342 263.69 0 134.11 131.38 144.54 153.64 255 0 130 130 149 148 2 0 1 1 1 1 45356 6215 3121 5982 14364;14365 16518;16519 16518 2 FIHTKPNR Unmodified 1011.5614 0.56139826 2191 Q69ZK9;E9QK34;Q99K10 Nlgn2;Nlgn1 Neuroligin-2;Neuroligin-1 yes no 0 0 0 1 11.5 0.5 1 1 34.578 34.578 4 0.0044393 4971 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.212 57.47 0 267.59 287.01 273.63 77.404 0 0 256 287 266 74 0 0 2 1 1 1 0 20435 6216 2191 5983 14366;14367 16520;16521 16521 2 FIIDVGYER Unmodified 1110.571 0.5709599 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 13 0 1 70.939 70.939 2 0.016785 26471 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.224 33.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6217 2170 5984 14368 16522 16522 1 FIIEYEDAMHDAGLWR Unmodified 1964.9091 0.90908309 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 9.5 3.5 1 1 85.579 85.579 3 0.00020036 33439 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.477 53.835 39.082 45.209 96.09 36.52 0 39.442 37 46 93 37 0 37 1 1 2 1 0 2 9695.8 6218 331 5985 14369;14370 16523;16524 16524 2 FIIHAPPGEFNEVFNDVR Unmodified 2100.0429 0.042874453 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 0 8 2.12 2 2 2 1 1 76.527 76.527 3;4 1.4619E-09 28959 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.56 91.479 189.21 192.26 202.48 244.05 262.88 312.1 177 186 196 232 260 296 7 5 5 8 6 8 130760 6219 1564 5986 14371;14372;14373;14374;14375;14376;14377;14378 16525;16526;16527;16528;16529;16530;16531;16532;16533;16534;16535;16536 16535 12 FIIHNALSHCCLAGK Unmodified 1739.86 0.85996483 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 0 12 0 1 56.15 56.15 4 0.056943 12617 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 30.567 19.933 39.516 36.703 0 49.416 45.846 0 37 37 0 46 46 0 1 1 0 1 1 0 3019.4 6220 2320 5987 14379 16537 16537 1 FIIPNIVK Unmodified 942.59024 0.59023878 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 8.33 5.22 2 1 2 1 78.542 78.542 2;3 0.0011785 27810 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.35 76.773 979.06 846.66 1459 1083.9 1034.4 1526.8 923 874 1438 1053 1044 1453 9 9 12 9 8 10 1071000 6221 1315 5988 14380;14381;14382;14383;14384;14385 16538;16539;16540;16541;16542;16543;16544;16545;16546;16547;16548;16549;16550;16551 16542 14 FIIPQIVK Unmodified 956.60589 0.60588884 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 7.29 5.47 3 1 2 1 78.942 78.942 2 0.0011785 27992 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.35 79.634 2241.4 1985.1 6318.7 5282.1 8611.6 2592.1 2109 2045 6152 5238 8543 2504 8 12 11 10 14 10 1709500 6222 1389 5989 14386;14387;14388;14389;14390;14391;14392 16552;16553;16554;16555;16556;16557;16558;16559;16560;16561;16562;16563;16564;16565;16566;16567;16568;16569;16570 16557 19 FIKPLSNAYHELAQVYSTNNPSELR Unmodified 2890.4614 0.46135645 1269 O88543;F6YCA7 Cops3 COP9 signalosome complex subunit 3 yes no 0 0 0 1 11 0.816 1 1 1 80.82 80.82 4 2.6927E-11 24663 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.012 55.305 50.019 57.578 20.456 0 48.116 37 47 56 19 0 46 37 2 1 1 0 1 1 18798 6223 1269 5990 14393;14394;14395 16571;16572;16573;16574;16575 16573 5 FILIQNR Unmodified 902.53379 0.53378653 1732 P62743;A0A0U1RPS0 Ap2s1 AP-2 complex subunit sigma yes no 0 0 0 0 9.25 4.82 1 1 1 1 63.051 63.051 2 7.3091E-16 21332 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 186.07 144.86 3858.3 3799.2 3232.7 3809.3 4911.2 5107.2 3628 3866 3248 3746 5024 4914 3 5 4 5 4 4 744510 6224 1732 5991 14396;14397;14398;14399 16576;16577;16578;16579;16580 16576 5 FILNLPTFSVR Unmodified 1305.7445 0.74450759 3312 Q9R1P3 Psmb2 Proteasome subunit beta type-2 yes yes 0 0 0 0 5 5.66 2 1 89.715 89.715 2;3 0.00017232 32613 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.89 30.632 97.889 60.6 121.35 118.33 54.876 127.42 92 60 118 115 55 121 6 3 6 7 2 8 15470 6225 3312 5992 14400;14401;14402 16581;16582;16583;16584;16585;16586;16587;16588;16589 16588 9 FILSCADDK Unmodified 1067.4957 0.49574604 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 8 0 1 64.032 64.032 2 0.0054012 20442 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.647 35.778 0 48.944 0 0 145.39 0 0 46 0 0 139 0 0 1 0 0 1 0 11230 6226 1760 5993 14403 16590 16590 1 FILSIAYSPDGK Unmodified 1309.6918 0.69180331 794 D6RJ72;D6RDC7;Q8BVQ0;Q9ERF3 Wdr61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 0 0 0 0 11 0 1 81.112 81.112 3 0.05149 25067 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36 21.124 0 0 0 0 36.358 68.253 0 0 0 0 37 65 0 0 0 0 1 1 7750.8 6227 794 5994 14404 16591 16591 1 FILTESDTVK Unmodified 1151.6074 0.60740498 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 7 0 1 67.525 67.525 3 0.0011806 22828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.885 36.41 0 0 48.153 36.354 64.699 47.19 0 0 46 37 65 46 0 0 1 1 1 1 2799.2 6228 2226 5995 14405 16592 16592 1 FINDQYEK Unmodified 1055.4924 0.49237523 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 8.67 3.09 1 1 1 55.164 55.164 2;3 0.012893 17927 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.8 22.324 207.7 121.41 154.74 320.74 180.85 253.58 195 121 148 305 185 241 3 2 1 3 2 2 20211 6229 431 5996 14406;14407;14408 16593;16594;16595 16593 3 FINEVVK Unmodified 847.48035 0.48035398 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 8 0 1 62.036 62.036 2 0.055021 19514 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.213 28.842 87.913 100.81 107.13 145.54 0 127.92 83 102 111 139 0 120 1 1 1 1 0 1 13294 6230 1958 5997 14409 16596 16596 1 FINLFPETK Unmodified 1107.5964 0.59644637 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 10.7 1.11 1 2 1 2 80.076 80.076 2;3 0.00036455 25201 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.4 81.239 89.76 426.34 102.95 259.09 219.57 303.65 84 408 102 241 222 288 2 7 2 5 3 4 134270 6231 1400 5998 14410;14411;14412;14413;14414;14415 16597;16598;16599;16600;16601;16602;16603;16604 16600 8 FINLYGLQQQGIFR Unmodified 1695.9097 0.90967544 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 6.75 5.76 2 1 1 85.722 85.722 3 0.00011908 30388 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.629 67.871 29.872 73.416 28.874 149.18 18.563 0 28 69 28 140 19 0 1 1 1 3 1 0 29357 6232 965 5999 14416;14417;14418;14419 16605;16606;16607;16608;16609 16605 5 FINLYGLQQQGIFR Deamidation (N) 1696.8937 0.89369102 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 1 0 0 13 0 1 85.735 85.735 3 0.024667 33492 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.511 21.978 29.817 0 38.184 38.165 0 20.254 28 0 37 37 0 19 1 0 1 1 0 1 7437.2 6233 965 5999 14420 16610 16610 257 1 FINMFAVLDELK Unmodified 1438.753 0.75302336 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;G3UZI5;Q5SQX6 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 11.5 1.12 1 1 1 1 104.64 104.64 3 2.0142E-06 34615 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.75 67.467 42.759 28.093 45.393 30.604 8.9102 41.32 40 28 45 28 9 39 3 3 2 1 1 3 15809 6234 2282;2057 6000 14421;14422;14423;14424 16611;16612;16613;16614;16615 16612 5 FINNNAVTK Unmodified 1019.54 0.53999412 1935 Q3TPM3;Q9WTX6 Cul1 Cullin-1 yes no 0 0 0 0 9 0 1 52.576 52.576 2 0.004573 14338 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.465 35.276 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6235 1935 6001 14425 16616 16616 1 FINPAIVSPYEAGILDK Unmodified 1845.9877 0.98765098 1885 Q04690 Nf1 Neurofibromin yes yes 0 0 0 0 8.5 0.5 1 1 87.591 87.591 3 0.0013967 31724 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.568 35.402 39.404 26.677 27.391 47.773 46.373 20.254 37 28 28 46 46 19 2 2 1 2 1 1 4251.1 6236 1885 6002 14426;14427 16617;16618 16617 2 FIPCSPFSDYVYK Unmodified 1621.7487 0.74866627 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 10.4 1.5 2 1 1 1 82.723 82.723 2;3;4 4.8384E-05 28533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.745 81.23 266.81 243.13 232.75 192.77 260.88 184.11 251 242 232 186 259 176 4 4 3 2 2 3 52394 6237 836 6003 14428;14429;14430;14431;14432 16619;16620;16621;16622;16623 16620 5 FIPFIGVVK Unmodified 1018.6215 0.62153891 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 1 0 2 90.271 90.271 2 0.00065709 31649 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.89 41.272 144.57 152.74 164.02 178.36 112.96 153.1 136 152 166 170 111 144 7 7 7 5 3 5 21540 6238 2594 6004 14433;14434 16624;16625;16626;16627;16628;16629;16630;16631;16632 16625 9 FIPFVGVVK Unmodified 1004.6059 0.60588884 344 A0A1Y7VLZ7;E9Q7E9;Q3V3Q7 Pacs2 Phosphofurin acidic cluster sorting protein 2 yes no 0 0 0 0 1 0 1 84.652 84.652 2 0.00049859 29783 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.37 71.207 40.536 47.275 0 30.193 21.85 83.59 38 47 0 28 23 79 2 2 0 1 1 2 5254.7 6239 344 6005 14435 16633;16634 16633 2 FIPGKPVLETR Unmodified 1255.7289 0.72885752 122 Q9QZ23;A0A0N4SUH8;D3Z285 Nfu1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial yes no 0 0 0 1 11 0 1 58.859 58.859 3 0.027606 15130 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.786 13.069 0 0 0 0 199.41 132.89 0 0 0 0 195 130 0 0 0 0 1 1 24858 6240 122 6006 14436 16635 16635 1 FIPLIPIPER Unmodified 1193.7172 0.7172302 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 85.857 85.857 2;3 1.5529E-07 27610 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.39 96.077 123.88 81.322 75.781 125.42 305.4 154.69 116 83 72 118 306 148 2 1 3 3 3 2 374790 6241 1362 6007 14437;14438;14439;14440;14441 16636;16637;16638;16639;16640;16641;16642 16638 7 FIPLSEPAPVPPIPNEQQLAR Unmodified 2312.2529 0.25286723 2678 Q8VBV7 Cops8 COP9 signalosome complex subunit 8 yes yes 0 0 0 0 9.33 2.62 1 1 1 82.241 82.241 3 2.377E-11 29077 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.413 82.334 20.244 97.558 65.352 39.405 66.136 78.101 19 94 65 38 65 74 1 3 2 2 2 2 20327 6242 2678 6008 14442;14443;14444 16643;16644;16645 16644 3 FIPPELSMWDYFVAK Unmodified 1841.9062 0.90622954 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 9 0 1 103.61 103.61 3 0.011307 36647 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.621 30.351 0 14.82 4.5208 0 13.962 19.856 0 14 5 0 14 19 0 1 1 0 1 1 743.1 6243 570 6009 14445 16646 16646 1 FIPPWLK Unmodified 899.52691 0.52691024 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4;A0A1W2P896;A0A1W2P7H7 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 6.75 5.76 2 1 1 83.137 83.137 2 0.0098617 29108 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 123.34 13.097 79.767 149.27 216.31 190.07 336.39 160.9 75 147 219 184 336 156 2 3 3 4 4 3 78549 6244 1250 6010 14446;14447;14448;14449 16647;16648;16649;16650;16651;16652 16647 6 FIPQMTAGK Unmodified 991.51609 0.51608756 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 63.218 63.218 2 0.0015423 17025 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.731 23.731 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6245 162 6011 14450 16653 16653 1 FIQYLASR Unmodified 996.53927 0.53926584 2129;2280 Q7M6Y3;A0A140LHG9;Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Picalm;Snap91 Phosphatidylinositol-binding clathrin assembly protein;Clathrin coat assembly protein AP180 no no 0 0 0 0 9.25 4.82 1 1 1 1 67.304 67.304 2 2.9175E-16 18744 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 183.9 120.61 3163.1 1106.1 1599.8 3188 1508.9 3773.7 2962 1160 1604 3022 1547 3575 5 3 4 4 3 3 791790 6246 2280;2129 6012 14451;14452;14453;14454 16654;16655;16656;16657;16658 16656 5 FISADQSVALGELVK Unmodified 1575.8508 0.85082315 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 9 2.83 2 1 81.51 81.51 2;3 8.064E-05 29424 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.519 64.986 318.54 202.13 213.87 238.88 219.84 315.66 299 211 220 234 228 302 3 2 2 2 1 2 24001 6247 2585 6013 14455;14456;14457 16659;16660;16661 16660 3 FISELAR Unmodified 834.45995 0.45995289 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 8 0 1 59.178 59.178 2 0.020603 18265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.42 40.518 147.47 125.45 175.02 160.36 101.19 219.91 139 130 176 158 111 209 1 1 1 1 1 1 21565 6248 2282;2057 6014 14458 16662 16662 1 FISETLR Unmodified 864.47052 0.47051757 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 55.943 55.943 2 0.045499 16708 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.741 31.077 0 68.095 63.687 57.412 0 99.138 0 65 65 56 0 93 0 1 1 1 0 1 5218.7 6249 3266 6015 14459 16663 16663 1 FISGIFTK Unmodified 911.51165 0.5116541 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 8 4.97 1 1 1 75.684 75.684 2 0.0059211 26148 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.17 80.555 285.81 185.86 316.92 224.59 307.28 445.35 269 185 306 222 315 426 5 3 4 3 4 5 45463 6250 1980 6016 14460;14461;14462 16664;16665;16666;16667;16668 16664 5 FISNPNSIILAVTAANTDMATSEALK Unmodified 2691.3789 0.37893196 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 11 1.53 1 2 1 2 97.706 97.706 3;4 4.1715E-20 31939 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.813 60.156 0 84.719 38.793 49.618 54.977 38.44 0 83 38 46 56 37 0 4 2 1 2 1 26858 6251 815;2590 6017 14463;14464;14465;14466;14467;14468 16669;16670;16671;16672;16673;16674 16671 6 FITASLPCNK Unmodified 1149.5852 0.58522975 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 10.5 0.5 1 1 64.449 64.449 3 6.3717E-06 17422 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.87 72.579 0 78.736 0 49.269 53.656 77.353 0 74 0 46 56 74 0 1 0 1 1 1 7169.4 6252 568 6018 14469;14470 16675;16676 16676 2 FITHAPPGEFNEVFNDVR Unmodified 2088.0065 0.0064889465 1563 P47753;Q5RKN9;A0A0G2JE27 Capza1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 0 6.5 0.5 1 1 70.147 70.147 3 9.3718E-05 24846 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.906 44.388 39.701 0 0 90.63 62.827 29.12 37 0 0 84 65 28 1 0 0 2 2 1 9225.8 6253 1563 6019 14471;14472 16677;16678 16677 2 FITIFGTR Unmodified 953.53345 0.53345218 1577 P48036;A0A0G2JGQ0 Anxa5 Annexin A5 yes no 0 0 0 0 6.5 5.5 1 1 75.855 75.855 2 0.0013026 26292 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.64 94.529 817.99 549.35 631.93 424.76 984.71 713.41 768 563 632 429 981 693 5 4 4 3 5 5 226390 6254 1577 6020 14473;14474 16679;16680;16681;16682;16683;16684 16680 6 FITPEDMNK Unmodified 1093.5114 0.51139611 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 7 0 1 63.178 63.178 3 0.027048 20681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.457 14.236 49.187 0 28.761 28.89 0 29.848 46 0 28 28 0 28 1 0 1 1 0 1 4636.3 6255 1581 6021 14475 16685 16685 1 FIVLNPAR Unmodified 928.54944 0.54943659 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 6.5 5.5 1 1 64.486 64.486 2 2.0695E-25 15627 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 151.17 93.709 39.474 0 38.135 38.168 0 39.442 37 0 37 37 0 37 1 0 1 1 0 1 2817.4 6256 3241 6022 14476;14477 16686;16687 16687 2 FIVLSNNYLQIR Unmodified 1478.8245 0.82454882 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 6.67 5.68 3 2 1 82.012 82.012 2;3 4.5976E-60 22420 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 213.03 159.15 189.1 143.52 159.26 175.8 124.11 216.38 177 140 158 168 121 204 5 5 5 6 4 5 72670 6257 71;74;949;1367 6023 14478;14479;14480;14481;14482;14483 16688;16689;16690;16691;16692;16693;16694;16695;16696 16695 9 FIVLSNNYLQIR Deamidation (N) 1479.8086 0.80856441 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 1 0 0 7.33 4.5 2 2 2 84.834 84.834 2;3 0.0017089 27013 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.232 26.664 30.044 19.892 19.365 9.4714 47.439 20.254 28 19 19 9 47 19 1 1 1 1 2 1 15396 6258 71;74;949;1367 6023 14484;14485;14486;14487;14488;14489 16697;16698;16699;16700;16701;16702 16702 24;25 6 FIVYSYK Unmodified 918.48511 0.485105 2930 Q9CQI3;A0A2I3BR94 Gmfb Glia maturation factor beta yes no 0 0 0 0 9.25 4.82 1 1 1 1 66.958 66.958 2 0.0054475 22651 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.35 65.083 676.77 216.33 767.5 741.36 963.66 309.47 636 227 745 724 964 297 4 2 4 4 5 2 325870 6259 2930 6024 14490;14491;14492;14493 16703;16704;16705;16706;16707;16708 16703 6 FIWNSEK Unmodified 922.45487 0.45486751 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 64.392 64.392 2;3 0.0025027 20082 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.16 47.777 2592.8 2274.5 3119.8 2781.2 2863.9 3283.3 2442 2351 3119 2761 2938 3147 4 6 5 6 5 4 585100 6260 1369 6025 14494;14495;14496;14497 16709;16710;16711;16712;16713;16714;16715 16709 7 FIWNSEKK Unmodified 1050.5498 0.54983053 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 1 10 0 1 57.148 57.148 3 0.035562 14744 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.153 19.444 1029.5 693.98 1305.9 917.79 760.95 1102.9 970 738 1288 924 804 1055 1 1 1 1 1 1 87863 6261 1369 6026 14498 16716 16716 1 FIYATVK Unmodified 840.47454 0.47454032 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 11.5 0.5 1 1 62.896 62.896 2 0.0034215 15293 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 150.02 61.285 193.86 69.716 0 206.71 50.847 266.12 181 74 0 190 56 251 2 1 0 3 1 3 36868 6262 468 6027 14499;14500 16717;16718;16719 16719 3 FKAEHDQLLLNYAK Unmodified 1688.8886 0.88860564 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 1 11 2 1 1 59.699 59.699 4 0.0023438 18307 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.841 37.245 88.186 177.74 214.2 115.74 180.57 221.91 83 176 213 111 185 213 1 2 2 1 2 2 14959 6263 1379 6028 14501;14502 16720;16721 16720 2 FKDFYQFTFNFAK Unmodified 1701.8191 0.81912909 105 A0A140T8R8;A0A0G2JGV7;Q3UT23;A0A1Y7VP24;Q9QZ73 Dcun1d1 DCN1-like protein;DCN1-like protein 1 yes no 0 0 0 1 12 0 1 86.7 86.7 3 0.02826 24486 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 46.378 34.092 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 2677.2 6264 105 6029 14503 16722 16722 1 FKDIFQEIFDK Unmodified 1428.7289 0.7289171 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 1 11 1.22 2 1 1 92.229 92.229 3 3.4808E-05 30293 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.531 51.785 98.192 35.102 173.77 265.49 366.26 279.84 92 37 167 255 371 269 2 1 2 3 4 2 32259 6265 1618 6030 14504;14505;14506;14507 16723;16724;16725;16726 16723 4 FKDLGEEHFK Unmodified 1248.6139 0.61388734 656 CON__P02769 yes yes 0 0 0 1 8 0 1 54.912 54.912 4 0.012497 16113 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.143 19.765 68.175 0 263.93 115.43 0 0 65 0 249 120 0 0 1 0 1 1 0 0 6590.6 + 6266 656 6031 14508 16727 16727 1 FKDPGLVDQLVK Unmodified 1357.7606 0.76055158 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 1 8 0 1 69.844 69.844 3 0.0064707 23345 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.569 20.266 88.59 140.96 57.713 90.719 135.98 0 83 139 56 83 130 0 1 2 1 1 1 0 12224 6267 1460 6032 14509 16728;16729 16729 2 FKDPNAPK Unmodified 915.48142 0.48141661 116 A0A0J9YUD8;A0A0J9YUZ4;P63158;D3YZ18 Hmgb1 High mobility group protein B1 yes no 0 0 0 1 8 0 1 43.435 43.435 3 0.032982 10869 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.262 30.89 181.58 165.44 0 207.67 0 372.03 170 167 0 190 0 349 1 1 0 1 0 1 17107 6268 116 6033 14510 16730 16730 1 FKEINNAHAILTDATK Unmodified 1784.9421 0.94209778 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 1 8 0 1 61.777 61.777 4 0.00033238 19510 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.107 47.618 39.043 55.893 121.85 123.97 54.477 127.43 37 56 121 121 56 121 1 1 2 2 1 2 4012.6 6269 1682 6034 14511 16731;16732 16732 2 FKEPPAFGPMCDLLWSDPSEDFGNEK Unmodified 3012.331 0.33099549 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 1 8 0 1 89.71 89.71 4 0.00026256 32487 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.973 32.266 39.442 17.07 29.073 0 0 0 37 19 28 0 0 0 1 1 1 0 0 0 1320.9 6270 811 6035 14512 16733 16733 1 FKEPPAYGPMCDILWSDPLEDFGNEK Unmodified 3054.3779 0.37794568 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 1 8 2.61 2 1 1 1 92.682 92.682 3;4;5 1.3307E-19 36502 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.711 56.971 85.585 95.412 72.998 124.23 9.414 99.138 80 94 75 115 9 93 3 3 3 3 1 3 16284 6271 1786 6036 14513;14514;14515;14516;14517 16734;16735;16736;16737;16738 16738 5 FKEYCPMVFR Unmodified 1375.6417 0.64169877 2334;1244 O70172;Q80XI4 Pip4k2a;Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 1 10 0 1 62.756 62.756 3 0.042193 17266 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.292 27.375 68.863 78.04 82.117 59.699 52.48 97.64 65 79 83 60 56 93 1 1 1 1 1 1 5095.7 6272 1244;2334 6037 14518 16739 16739 1 FKGPFTDVVTTNLK Unmodified 1565.8453 0.84534384 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 1 10.5 0.5 2 2 70.063 70.063 3;4 0.00011046 20136 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.927 44.239 374.34 211.94 320.61 423.53 175.94 295.08 351 223 314 408 176 278 4 3 3 5 2 3 69759 6273 3343 6038 14519;14520;14521;14522 16740;16741;16742;16743;16744;16745;16746 16746 7 FKGPMTVLR Unmodified 1047.5899 0.5899212 1740 P62812;A0A0U1RPE4;A0A140LJE7 Gabra1 Gamma-aminobutyric acid receptor subunit alpha-1 yes no 0 0 0 1 12 0 1 55.507 55.507 3 0.04935 12322 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.276 21.341 157.09 94.462 207.75 146.4 158.54 0 148 102 204 148 158 0 1 1 1 1 1 0 12432 6274 1740 6039 14523 16747 16747 1 FKLDLDFPNLPYLMDGK Unmodified 2025.0281 0.028135591 1584 P48774;E9PVM7 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 1 11 2 1 1 95.562 95.562 3;4 0.00014453 37553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.918 48.989 0 19.566 38.86 0 29.288 0 0 19 37 0 28 0 0 1 1 0 1 0 817.14 6275 1584 6040 14524;14525 16748;16749 16749 2 FKLEAPDADELPR Unmodified 1499.762 0.76200815 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 6 0 1 63.013 63.013 3 4.2478E-07 21620 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.74 80.913 221.29 139.21 199.69 211.25 222.91 201.51 208 148 202 208 229 195 1 1 1 1 1 1 78308 6276 2843 6041 14526 16750 16750 1 FKLPGQPPASMGR Unmodified 1384.7285 0.72853995 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 8 4.97 1 1 1 55.576 55.576 3 1.5345E-13 12380 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.41 78.322 574.07 503.17 1047.8 754.18 805.44 810.22 541 522 1030 761 827 780 3 3 4 4 3 2 138150 6277 2132 6042 14527;14528;14529 16751;16752;16753;16754 16754 4 FKPPPPNSDIGWR Unmodified 1509.7728 0.7728476 1855 P97494 Gclc Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 1 9.5 0.5 1 1 56.831 56.831 3 0.00033615 14537 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.326 38.358 128.73 107.85 94.035 115.41 74.657 88.478 121 111 93 112 74 83 2 2 1 2 1 1 10313 6278 1855 6043 14530;14531 16755;16756 16756 2 FKSPSVAVAQPK Unmodified 1257.7081 0.70812208 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 10.7 0.471 1 2 50.641 50.641 3;4 0.00036418 12009 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.617 53.179 172.34 337.56 187.56 164.57 69.844 0 162 347 185 162 74 0 1 3 1 1 1 0 76767 6279 2396 6044 14532;14533;14534 16757;16758;16759 16757 3 FKVDLSPYPTISHINK Unmodified 1857.9989 0.99888437 338 Q9WVL0;A0A1Y7VJZ2;A0A1Y7VNC1 Gstz1 Maleylacetoacetate isomerase yes no 0 0 0 1 10.5 0.5 1 1 65.516 65.516 4 0.00065034 17881 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.728 39.908 88.692 72.756 0 178.02 239.95 115.23 83 74 0 167 241 111 1 1 0 2 2 1 15952 6280 338 6045 14535;14536 16760;16761 16761 2 FKVPQQILQGLVDVR Unmodified 1739.0094 0.0093894799 2653 Q8R2Y0 Abhd6 Monoacylglycerol lipase ABHD6 yes yes 0 0 0 1 8 4.97 1 1 1 83.529 83.529 3 0.00016084 22927 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.195 75.071 0 29.184 36.361 71.147 31.49 28 0 28 37 70 32 28 0 1 1 2 1 1 15805 6281 2653 6046 14537;14538;14539 16762;16763;16764 16764 3 FLAIVTESAGGGSFLVIPLEQTGR Unmodified 2461.3217 0.32167508 2393 Q8BH44;G3UW48;G3V005 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 11 0 1 102.14 102.14 3 0.045921 33933 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 27.055 17.772 0 9.576 0 5.465 0 0 0 9 0 5 0 0 0 1 0 1 0 0 1218.9 6282 2393 6047 14540 16765 16765 1 FLALGTHYGK Unmodified 1105.592 0.59202969 2049 Q5KU39 Vps41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 0 11 0 1 58.745 58.745 3 0.012407 15121 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.79 17.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6283 2049 6048 14541 16766 16766 1 FLASVSTVLTSK Unmodified 1251.7075 0.70745338 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 5.27 5.35 25 3 11 2 91.674 91.674 2;3 1.4117E-74 29015 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 225.31 168.58 3632 3954.6 4131.7 3970.3 6033.4 4191.6 3420 3986 4181 3932 6063 4076 25 32 29 28 29 30 2357000 6284 2735 6049 14542;14543;14544;14545;14546;14547;14548;14549;14550;14551;14552;14553;14554;14555;14556;14557;14558;14559;14560;14561;14562;14563;14564;14565;14566;14567;14568;14569;14570;14571;14572;14573;14574;14575;14576;14577;14578;14579;14580;14581;14582 16767;16768;16769;16770;16771;16772;16773;16774;16775;16776;16777;16778;16779;16780;16781;16782;16783;16784;16785;16786;16787;16788;16789;16790;16791;16792;16793;16794;16795;16796;16797;16798;16799;16800;16801;16802;16803;16804;16805;16806;16807;16808;16809;16810;16811;16812;16813;16814;16815;16816;16817;16818;16819;16820;16821;16822;16823;16824;16825;16826;16827;16828;16829;16830;16831;16832 16769 66 FLAVGLVDNTVR Unmodified 1302.7296 0.7295858 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 10 0.816 1 1 1 75.922 75.922 2;3 0.00059031 22595 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.55 38.929 9 0 0 20.767 0 29.848 9 0 0 19 0 28 1 0 0 1 0 1 7449.1 6285 2799 6050 14583;14584;14585 16833;16834;16835 16835 3 FLCGFGLTIG Unmodified 1083.5423 0.54230231 3272 Q9QYA2 Tomm40 Mitochondrial import receptor subunit TOM40 homolog yes yes 0 0 0 0 12 0.816 1 1 1 99.599 99.599 2 0.0019595 32807 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.989 62.817 0 19.152 9.0804 30.76 21.02 25.33 0 18 9 29 21 24 0 2 1 3 2 2 8841.1 6286 3272 6051 14586;14587;14588 16836;16837;16838;16839 16836 4 FLDAGHK Unmodified 786.40244 0.40243801 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 9.33 2.62 1 1 1 45.372 45.372 3 0.0050184 11818 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.45 49.844 226.14 156.83 271.87 315.19 162.83 341.8 213 166 269 306 167 325 2 2 2 3 1 3 28076 6287 1470 6052 14589;14590;14591 16840;16841;16842 16841 3 FLDGDEMTLADCNLLPK Unmodified 1950.9067 0.90669983 3273 Q9QYB1 Clic4 Chloride intracellular channel protein 4 yes yes 0 0 0 0 6 0 1 86.848 86.848 3 0.00086068 32529 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.608 40.412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6288 3273 6053 14592 16843 16843 1 FLDGIYVSEK Unmodified 1169.5968 0.5968403 242 A0A140T8T4;P51410;A0A0G2JES3 Rpl9 60S ribosomal protein L9 yes no 0 0 0 0 8 0 1 73.23 73.23 2 0.00081455 24800 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.297 65.554 0 0 32.91 38.48 0 39.442 0 0 32 37 0 37 0 0 1 1 0 1 3965 6289 242 6054 14593 16844 16844 1 FLDLLEPLGR Unmodified 1171.6601 0.66010926 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0 1 91.837 91.837 2 0.010771 32619 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.404 37.879 0 0 70.33 0 36.688 58.649 0 0 65 0 37 56 0 0 1 0 1 1 4551.2 6290 893 6055 14594 16845 16845 1 FLDLSLFTHR Unmodified 1247.6663 0.66625727 1616 P53986 Slc16a1 Monocarboxylate transporter 1 yes yes 0 0 0 0 11 0 1 79.634 79.634 3 0.00055691 24485 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.17 25.494 0 19.729 29.112 0 0 59.696 0 19 28 0 0 56 0 1 1 0 0 1 1718.6 6291 1616 6056 14595 16846 16846 1 FLDTAFDLDAFK Unmodified 1401.6816 0.68163256 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 93.678 93.678 3 0.00035433 33942 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.44 38.109 59.706 75.774 0 0 37.714 58.62 56 75 0 0 37 56 2 2 0 0 1 2 5759 6292 2074 6057 14596;14597 16847;16848 16848 2 FLDTAFDLDAFKK Unmodified 1529.7766 0.77659558 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 1 9 0 1 84.554 84.554 3 0.00016881 29325 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.725 70.3 0 0 0 111.49 0 108.73 0 0 0 102 0 102 0 0 0 1 0 1 11496 6293 2074 6058 14598 16849 16849 1 FLDTAFNLK Unmodified 1067.5651 0.56514624 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 10.8 1.48 1 1 1 1 79.185 79.185 2 0.0005642 26967 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.52 76.836 266.33 137.13 293.26 264.26 71.802 195.16 250 149 287 259 74 185 3 3 3 4 1 3 45178 6294 628 6059 14599;14600;14601;14602 16850;16851;16852;16853;16854 16850 5 FLDTFLPLGHPPLPGSLLR Unmodified 2089.1724 0.17243206 2831 Q99JP7;H3BKA5 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 0 0 0 0 11.5 0.5 1 1 92.63 92.63 3 1.684E-08 26584 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.238 61.824 0 29.792 0 50.916 24.171 0 0 28 0 47 24 0 0 2 0 2 1 0 14409 6295 2831 6060 14603;14604 16855;16856;16857 16857 3 FLDVLELAEK Unmodified 1175.6438 0.64379049 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;A0A0A0MQH5 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 8 0 1 91.938 91.938 2 0.0049274 33401 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.827 23.657 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1037.6 6296 581 6061 14605 16858 16858 1 FLDYGFFYFDGSEVQR Unmodified 1988.8945 0.89447888 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 8 0.816 1 1 1 95.024 95.024 3 1.8896E-05 34326 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.767 85.866 0 14.759 22.193 45.28 7.3261 20.045 0 14 23 42 9 19 0 1 2 2 1 1 9626.1 6297 927 6062 14606;14607;14608 16859;16860;16861 16860 3 FLEAGIYEVPIIITDSGNPPK Unmodified 2272.1991 0.19910032 727 D3YYT0;P15116 Cdh2 Cadherin-2 yes no 0 0 0 0 6.67 0.471 1 2 94.799 94.799 3;4 3.2164E-07 35896 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.265 47.386 29.865 0 43.129 20.246 37.104 32.256 28 0 40 19 37 31 1 0 2 1 2 2 5283.9 6298 727 6063 14609;14610;14611 16862;16863;16864 16862 3 FLEEEAEK Unmodified 993.46549 0.46549177 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 57.009 57.009 3 0.03566 19330 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.823 17.253 48.905 35.298 46.197 27.165 36.465 28.807 46 37 46 28 37 28 1 1 1 1 1 1 1824.4 6299 3266 6064 14612 16865 16865 1 FLEEFENNLER Unmodified 1438.6729 0.67285879 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 4 0 1 79.176 79.176 3 0.05564 29544 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.847 21.275 9.657 0 0 9.837 0 0 9 0 0 9 0 0 1 0 0 1 0 0 971.88 6300 62 6065 14613 16866 16866 1 FLEEHPGGEEVLR Unmodified 1510.7416 0.74160705 1097 G5E850;P56395 Cyb5a Cytochrome b5 yes no 0 0 0 0 3.5 0.5 1 1 54.42 54.42 3 0.00083206 18274 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.292 27.007 79.734 112.01 106.52 145.1 25.437 136.79 75 112 111 139 28 129 2 3 3 3 1 3 20385 6301 1097 6066 14614;14615 16867;16868;16869 16868 3 FLEGTSCIAGVFVDATK Unmodified 1813.892 0.89203604 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 9 0 1 87.96 87.96 3 0.001372 30982 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.463 29.624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6302 3266 6067 14616 16870 16870 1 FLELACDSQEDVDSWK Unmodified 1940.8462 0.84620806 960 E9QLL2;Q8BZ98;F2Z460;E0CXZ8 Dnm3 Dynamin-3 yes no 0 0 0 0 13 0 1 82.784 82.784 3 2.0477E-05 32184 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.106 66.612 39.202 45.545 45.208 36.677 56.891 0 37 46 46 37 56 0 1 1 1 1 1 0 6540.8 6303 960 6068 14617 16871 16871 1 FLELFLGEFR Unmodified 1269.6758 0.67575932 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 11.3 1.25 1 1 1 103.6 103.6 2;3 5.2034E-05 33375 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.75 71.559 54.447 24.988 49.863 44.027 0 65.026 51 24 49 43 0 61 2 2 2 2 0 2 10190 6304 2302 6069 14618;14619;14620 16872;16873;16874 16872 3 FLELLPK Unmodified 858.52149 0.52149051 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 10.8 1.48 1 1 1 1 80.617 80.617 2;3 0.019297 24797 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.09 50.983 981.59 170.33 874.53 1238.5 819.56 902.32 920 176 861 1206 848 863 3 2 3 5 3 2 197690 6305 3123 6070 14621;14622;14623;14624 16875;16876;16877;16878;16879 16877 5 FLEMCDDLLAR Unmodified 1381.637 0.63700733 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 6 0 1 79.742 79.742 2 4.7798E-05 29363 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.815 57.528 0 28.515 76.406 43.798 102.4 66.368 0 28 74 46 102 65 0 1 1 1 1 1 6547.6 6306 1957 6071 14625 16880 16880 1 FLENYDAIR Unmodified 1139.5611 0.56112349 3226 Q9JKB1;A0A2I3BQ39 Uchl3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 0 0 0 0 6 0.816 1 1 1 64.518 64.518 2 0.0016461 22072 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.653 41.075 119.04 34.101 162.28 111.02 91.469 195.67 112 37 157 112 93 186 2 1 2 2 1 2 15512 6307 3226 6072 14626;14627;14628 16881;16882;16883 16882 3 FLEQQNK Unmodified 905.46068 0.46068117 1304;1423;648;651;2009 P03995;CON__H-INV:HIT000292931;Q99M73;P20152;A0A0A6YWC8;A2AKJ2;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__P05787;Q9DCV7;P11679;CON__Q9NSB2;CON__Q6ISB0;CON__P48668;CON__P04259;CON__P02538;CON__P13647;CON__O95678;CON__Q8N1N4-2;CON__Q7RTT2;CON__P07744;CON__Q8VED5;CON__Q5XKE5;E9Q1Z0;P07744;Q8VED5;Q3UV17;CON__Q01546;CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Gfap;Krt84;Vim;Krt7;Krt8;4732456N10Rik;Krt4;Krt79;Krt76;Krt86;5430421N21Rik;Krt81 Glial fibrillary acidic protein;Keratin, type II cuticular Hb4;Vimentin;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 8;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 79;Keratin, type II cytoskeletal 2 oral;Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 no no 0 0 0 0 8.6 2.42 1 1 1 1 1 49.594 49.594 2;3 0.0056644 15785 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.04 65.594 676.62 744.22 763.2 879.45 683.37 1155.4 636 748 781 858 720 1100 4 4 4 5 4 3 162490 + 6308 1304;1423;651;2009;648 6073 14629;14630;14631;14632;14633 16884;16885;16886;16887;16888 16888 5 FLEQQNQVLQTK Unmodified 1474.778 0.77799256 657;662 CON__P04264;P04104;CON__Q9R0H5;CON__Q7Z794;Q9R0H5;CON__P35908v2;CON__P35908;CON__Q6NXH9;Q6NXH9 Krt1;Krt71;Krt73 Keratin, type II cytoskeletal 1;Keratin, type II cytoskeletal 71;Keratin, type II cytoskeletal 73 no no 0 0 0 0 9.33 2.62 1 1 1 62.485 62.485 2;3 2.8101E-12 19778 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.6 86.787 286.68 185.27 231.79 126.3 297.57 297.45 269 195 223 121 297 287 2 2 2 2 2 3 57045 + 6309 657;662 6074 14634;14635;14636 16889;16890;16891 16890 3 FLESAAADVSDEDEDEDTDGR Unmodified 2284.9091 0.90913848 1236 O55106;F8WH41;F6Z700 Strn Striatin yes no 0 0 0 0 2.5 0.5 1 1 66.778 66.778 3 4.2455E-11 24031 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.975 75.317 0 0 9.738 19 19.874 0 0 0 9 19 19 0 0 0 1 1 1 0 5226.1 6310 1236 6075 14637;14638 16892;16893 16892 2 FLESEFSSENLR Unmodified 1456.6834 0.68342347 2333;11 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1;A0A087WSJ9;A0A087WSH2;A0A087WPW1;F6WDS8;A0A087WQG6;A0A087WNZ9;A0A087WRP8;A0A087WPC4;A0A087WPD1;Q9Z2H2;A0A0J9YTS6 Rgs7;Rgs6 Regulator of G-protein signaling 7;Regulator of G-protein signaling 6 no no 0 0 0 0 5.33 0.471 2 1 68.775 68.775 2;3 1.38E-05 24838 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.477 73.604 49.982 37.369 117.06 36.67 150.91 94.832 47 37 112 38 149 93 2 2 4 2 3 3 15360 6311 2333;11 6076 14639;14640;14641 16894;16895;16896;16897 16896 4 FLESQEFQPSIAK Unmodified 1522.7668 0.76675917 2016 Q3UZJ4;Q61151 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 0 7.5 0.5 1 1 71.361 71.361 3 0.00012969 24562 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.927 43.489 64.155 151.62 91.352 150.43 80.915 159.72 60 148 93 144 83 152 1 2 1 2 1 2 12302 6312 2016 6077 14642;14643 16898;16899 16898 2 FLFDSVSSQNMGLR Unmodified 1599.7715 0.77152697 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 10 0 2 78.365 78.365 2;3 0.00050439 24253 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.004 46.762 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 3092.6 6313 2422 6078 14644;14645 16900;16901 16900 2 FLFLVGGFAEAPLLQQAVQTAFGDK Unmodified 2666.4108 0.41082443 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 13 0 1 121.47 121.47 4 2.722E-20 45446 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.946 69.856 0 0 5.1803 5.1563 0 12.792 0 0 5 5 0 12 0 0 1 1 0 1 1471.6 6314 2585 6079 14646 16902 16902 1 FLFPEGIK Unmodified 949.5273 0.52730417 2633 Q8R0Y6;A0A0N4SW56;D3Z6B9;Q8K009 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 10.4 1.29 2 2 2 1 77.076 77.076 2;3 0.0098437 23182 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.565 42.058 431.38 464.46 581.92 447.31 279.31 578.33 407 473 584 436 278 550 4 5 5 4 2 5 74251 6315 2633 6080 14647;14648;14649;14650;14651;14652;14653 16903;16904;16905;16906;16907;16908;16909 16907 7 FLFPFFDSAYQGFASGDLEK Unmodified 2285.0681 0.06808615 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 10.9 1.2 1 3 2 2 1 105.68 105.68 3;4 1.4193E-11 43190 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.88 92.033 187.51 86.321 323.6 171.44 181.47 163.5 176 87 310 169 181 156 9 4 8 5 4 8 206040 6316 1311 6081 14654;14655;14656;14657;14658;14659;14660;14661;14662 16910;16911;16912;16913;16914;16915;16916;16917;16918;16919;16920;16921;16922;16923;16924;16925 16925 16 FLFVDADQIVR Unmodified 1321.703 0.7030367 2219 Q6P5E4 Uggt1 UDP-glucose:glycoprotein glucosyltransferase 1 yes yes 0 0 0 0 8.5 0.5 1 1 82.789 82.789 2 0.019085 28572 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.567 25.758 20.131 18.401 27.362 38.81 0 0 19 19 28 37 0 0 1 1 1 1 0 0 1292.7 6317 2219 6082 14663;14664 16926;16927 16927 2 FLGCVDIK Unmodified 950.48954 0.48953845 3352 Q9WVJ2;E9Q5I9;E9Q0U1;F6ZQQ3 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 9 0 1 68.982 68.982 3 0.056103 22128 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.979 12.17 69.667 15.518 0 0 38.702 0 65 19 0 0 37 0 1 1 0 0 1 0 3205.3 6318 3352 6083 14665 16928 16928 1 FLGDIEIWNQAEK Unmodified 1561.7777 0.77765821 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 13 0 1 84.683 84.683 3 0.0018036 33127 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.628 38.755 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6319 3032 6084 14666 16929 16929 1 FLGETDFAK Unmodified 1026.5022 0.50221163 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 7 0 1 68.281 68.281 2 0.030766 23094 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.019 22.461 59.338 73.672 63.603 45.07 75.334 0 56 74 65 46 74 0 1 1 1 1 1 0 3215.4 6320 761 6085 14667 16930 16930 1 FLGPVIVEIPHFAALR Unmodified 1778.0243 0.024311263 3449;3452 S4R2F3;S4R1J9;S4R2T7 Ank2 no no 0 0 0 0 11 0.816 1 1 1 87.518 87.518 3 1.1758E-18 24646 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 134.06 107.62 57.854 48.733 19.526 20.767 0 48.254 56 48 19 19 0 47 2 2 1 1 0 2 53704 6321 3449;3452 6086 14668;14669;14670 16931;16932;16933;16934;16935 16934 5 FLGVSCDK Unmodified 924.4375 0.43750288 1768 P63046 Sult4a1 Sulfotransferase 4A1 yes yes 0 0 0 0 8.5 0.5 1 1 58.684 58.684 2 0.017484 17214 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.906 34.189 0 78.736 0 48.313 104.47 0 0 74 0 46 102 0 0 1 0 1 1 0 11974 6322 1768 6087 14671;14672 16936;16937 16937 2 FLHDPSATQGFVGCALSSNIQR Unmodified 2404.1594 0.15937755 1402 P17563;Q63836;G3UYY2;A0A0R4J135 Selenbp1;Selenbp2 Selenium-binding protein 1;Selenium-binding protein 2 yes no 0 0 0 0 9 0 1 68.003 68.003 3 1.0286E-05 21689 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.169 43.238 0 29.152 38.285 0 0 29.848 0 28 37 0 0 28 0 1 1 0 0 1 3970.2 6323 1402 6088 14673 16938 16938 1 FLHGVIVAADSR Unmodified 1283.6986 0.69862003 1243 O55234;Q8BTY5 Psmb5 Proteasome subunit beta type-5 yes no 0 0 0 0 9.5 0.5 1 1 57.989 57.989 3 0.00019364 16958 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.522 52.368 148.18 116.63 62.997 168.94 0 69.29 139 120 65 158 0 65 2 2 1 2 0 1 24123 6324 1243 6089 14674;14675 16939;16940 16939 2 FLICTDVAAR Unmodified 1164.5961 0.59612879 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 9 0 1 66.131 66.131 2 1.559E-09 20830 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 159.58 116.99 59.862 44.908 0 71.045 0 88.478 56 46 0 65 0 83 1 1 0 1 0 1 8540.1 6325 2744 6090 14676 16941 16941 1 FLIDGFPR Unmodified 963.5178 0.51780212 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 0 10.8 1.48 1 1 1 1 75.174 75.174 2 0.0031167 22857 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.83 95.685 266.97 87.993 141.36 313.19 205.68 224.09 250 93 139 296 204 213 4 2 1 4 2 3 90933 6326 3130 6091 14677;14678;14679;14680 16942;16943;16944;16945;16946;16947 16945 6 FLIIPLGSHPVAK Unmodified 1390.8337 0.83365695 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 6.5 5.5 1 1 72.735 72.735 3 3.141E-14 24865 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.56 100.76 237.96 0 221.84 215.38 223.96 256.91 223 0 215 213 232 247 2 0 2 2 2 2 42019 6327 2594 6092 14681;14682 16948;16949 16948 2 FLIIPLGSHPVAR Unmodified 1418.8398 0.83980496 344 A0A1Y7VLZ7;E9Q7E9;Q3V3Q7 Pacs2 Phosphofurin acidic cluster sorting protein 2 yes no 0 0 0 0 1 0 1 70.296 70.296 3 0.00010026 23874 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.554 54.06 21.365 18.775 0 20.325 23.498 19.583 20 19 0 19 24 19 1 1 0 1 1 1 5661.3 6328 344 6093 14683 16950 16950 1 FLILPDMLK Unmodified 1088.6304 0.63038903 1724 P62320 Snrpd3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 0 0 11 0.816 1 1 1 91.99 91.99 2;3 0.001098 29443 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.005 29.322 18.158 0 13.974 28 0 0 17 0 13 28 0 0 1 0 1 1 0 0 12975 6329 1724 6094 14684;14685;14686 16951;16952;16953 16952 3 FLIPELCK Unmodified 1018.5521 0.55213871 3354 Q9WVQ5 Apip Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 0 10 0 1 78.845 78.845 3 0.021071 24435 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.166 21.232 20.387 0 0 30.079 27.906 0 19 0 0 28 28 0 1 0 0 1 1 0 1276.4 6330 3354 6095 14687 16954 16954 1 FLIPNASQPESK Unmodified 1329.6929 0.69286595 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 9.58 3.07 1 2 2 2 2 1 2 64.187 64.187 2;3;4 1.0381E-39 22982 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 192.44 127.96 1470 1902.2 1825.7 1985.5 2734.8 1220.9 1383 1908 1831 1943 2731 1182 7 11 8 8 11 8 1593300 6331 1773 6096 14688;14689;14690;14691;14692;14693;14694;14695;14696;14697;14698;14699 16955;16956;16957;16958;16959;16960;16961;16962;16963;16964;16965;16966;16967;16968 16967 14 FLIPNASQPESK Deamidation (N) 1330.6769 0.67688153 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 1 0 0 8.4 2.42 1 1 2 1 68.135 68.135 2;3 0.00024724 24852 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.611 53.771 99.364 45.965 49.573 70.054 226.1 114.65 93 47 46 65 223 111 2 2 1 1 3 2 54027 6332 1773 6096 14700;14701;14702;14703;14704 16969;16970;16971;16972;16973 16973 704 5 FLIPNLAFIDK Unmodified 1289.7384 0.73835958 2923 Q9CQE1;B1AWZ5 Nipsnap3b Protein NipSnap homolog 3B yes no 0 0 0 0 8 4.97 1 1 1 93.468 93.468 2;3 0.005889 32975 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.04 26.565 78.984 142.57 0 99.551 111.53 59.696 74 139 0 93 111 56 1 2 0 1 1 1 7307.4 6333 2923 6097 14705;14706;14707 16974;16975;16976 16974 3 FLISPEFFTVLHSNPSAYR Unmodified 2224.1317 0.13168946 2195 Q6I6G8 Hecw2 E3 ubiquitin-protein ligase HECW2 yes yes 0 0 0 0 12 0 1 86.883 86.883 3 4.4032E-05 24490 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.267 45.195 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3432.1 6334 2195 6098 14708 16977 16977 1 FLITHNPTNATLNK Unmodified 1582.8467 0.84674083 1248 O70274;Q63739 Ptp4a2;Ptp4a1 Protein tyrosine phosphatase type IVA 2;Protein tyrosine phosphatase type IVA 1 yes no 0 0 0 0 11.5 0.5 1 1 57.036 57.036 3 3.2016E-05 14334 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.69 73.283 94.16 0 29.52 13.543 0 0 92 0 28 14 0 0 2 0 1 1 0 0 17744 6335 1248 6099 14709;14710 16978;16979 16978 2 FLIWDTAGQER Unmodified 1334.6619 0.66190017 511 A2ARZ7;Q3TXV4;Q921E2;P35285 Rab22a;Rab31 Ras-related protein Rab-31;Ras-related protein Rab-22A yes no 0 0 0 0 9 0 1 76.402 76.402 3 0.018661 25625 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.077 24.176 0 0 0 30.256 18.484 0 0 0 0 28 19 0 0 0 0 1 1 0 2008.1 6336 511 6100 14711 16980 16980 1 FLKEEVNIAR Unmodified 1217.6768 0.67682195 3384;402 A0A2R8W6V9;A0A2R8VHB2;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 1 10.5 2.5 1 1 56.847 56.847 3 0.00077795 17482 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.752 58.911 569.29 269.8 751.99 641.01 437.58 685.74 536 278 739 635 469 655 2 1 2 2 2 2 65275 6337 402;3384 6101 14712;14713 16981;16982 16981 2 FLLADNLYCK Unmodified 1255.6271 0.62709457 1701 P61759;Q3TIR6 Vbp1 Prefoldin subunit 3 yes no 0 0 0 0 10.5 0.5 2 2 77.383 77.383 2;3 5.4119E-05 23809 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.65 65.494 217.35 155.65 126.53 50.278 145.39 69.29 204 158 121 46 139 65 4 3 2 1 2 1 30921 6338 1701 6102 14714;14715;14716;14717 16983;16984;16985;16986 16984 4 FLLDAVFAK Unmodified 1022.5801 0.58006802 311 A0A1L1SV73;Q8BY87 Usp47 Ubiquitin carboxyl-terminal hydrolase 47 yes no 0 0 0 0 11.5 0.5 1 1 90.752 90.752 2 0.0013125 25829 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.56 53.524 39.548 50.533 0 30.269 17.805 62.386 37 50 0 28 19 59 1 2 0 1 1 2 6620.7 6339 311 6103 14718;14719 16987;16988 16988 2 FLLDHQGELFPSTDAQGV Unmodified 1972.9531 0.95305639 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 9.5 3.5 1 1 82.144 82.144 3 0.0005358 31841 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.053 26.633 69.071 133.66 0 100.35 68.798 116.36 65 130 0 93 74 111 2 2 0 2 2 2 18358 6340 2047 6104 14720;14721 16989;16990 16990 2 FLLEACK Unmodified 879.45242 0.45242467 789 D3Z7P3;D3Z7P4;F7B327 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 66.164 66.164 2 0.01962 20795 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.66 0 695.7 498.24 231.8 492.49 161.08 686.17 652 516 230 466 168 648 2 2 1 2 1 2 68169 6341 789 6105 14722;14723 16991;16992 16991 2 FLLELEHR Unmodified 1055.5764 0.57637963 954 Q8CHT1;E9QK62 Ngef Ephexin-1 yes no 0 0 0 0 8 0 1 63.553 63.553 3 0.0045094 20261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.478 14.278 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2164.8 6342 954 6106 14724 16993 16993 1 FLLEMGK Unmodified 836.44661 0.44661101 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 10 0 1 73.872 73.872 3 0.024771 22300 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.961 33.257 39.701 0 0 80.071 43.126 38.211 37 0 0 74 46 37 1 0 0 1 1 1 5064.4 6343 2370 6107 14725 16994 16994 1 FLLGNLTGFNPETDSVPVK Unmodified 2047.0626 0.062606842 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 10.2 0.748 1 2 2 89.799 89.799 3;4 9.6233E-05 29219 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.045 33.907 57.952 46.196 0 0 57.288 0 56 47 0 0 56 0 2 2 0 0 2 0 17380 6344 2413 6108 14726;14727;14728;14729;14730 16995;16996;16997;16998;16999;17000 16998 6 FLLGNLTGFNPETDSVPVK Deamidation (N) 2048.0466 0.046622427 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 1 0 0 11 0 1 89.677 89.677 3 0.010206 28663 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.912 25.774 20.332 0 9.2218 9.2874 0 0 19 0 9 9 0 0 1 0 1 1 0 0 4581.7 6345 2413 6108 14731 17001 17001 924 1 FLLLQQK Unmodified 888.54329 0.54328858 805 E0CYH4;Q8C6G8 Wdr26 WD repeat-containing protein 26 yes no 0 0 0 0 1 0 1 71.912 71.912 2 0.0059544 24417 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.72 19.466 109.24 41.578 0 89.226 79.392 96.873 102 46 0 83 83 93 1 1 0 1 1 1 14995 6346 805 6109 14732 17002 17002 1 FLLPYVHNK Unmodified 1129.6284 0.6284152 943 E9QAB6 Ptar1 yes yes 0 0 0 0 1 0 1 64.414 64.414 3 0.0038788 21626 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.252 27.014 20.149 0 39.932 0 46.807 38.106 19 0 37 0 46 37 1 0 1 0 1 1 2139.6 6347 943 6110 14733 17003 17003 1 FLLQESQQETTVK Unmodified 1549.7988 0.79878758 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 64.989 64.989 3 4.9643E-05 20958 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.591 67.959 69.372 74.058 0 59.689 80.751 96.834 65 74 0 56 83 93 1 1 0 1 1 1 6455.6 6348 570 6111 14734 17004 17004 1 FLLSESGSGK Unmodified 1023.5237 0.52367535 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9.8 1.72 1 2 1 1 61.679 61.679 2;3 2.7937E-21 21738 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 185.6 104.05 992.52 1065.4 1281.4 1142.1 709.56 1252.6 937 1084 1295 1127 735 1194 5 5 6 6 2 5 252720 6349 1055 6112 14735;14736;14737;14738;14739 17005;17006;17007;17008;17009;17010 17010 6 FLLSLPEHR Unmodified 1110.6186 0.61857879 2829 Q99JI4 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 0 10.5 0.5 1 1 63.141 63.141 3 0.00019952 17466 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.15 76.08 0 39.368 46 49.462 43.36 72.317 0 37 46 46 46 69 0 1 1 1 1 1 26337 6350 2829 6113 14740;14741 17011;17012 17011 2 FLMANGQLVK Deamidation (N) 1120.5951 0.59506616 1595;2132 Q61598;P50396;D6RI86 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 1 0 0 9.82 1.75 3 3 2 1 2 72.628 72.628 2;3 1.0108E-08 24227 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 160.75 106.34 455.69 254.01 285.45 464.35 321.83 448.7 427 259 278 450 326 427 6 7 4 6 4 6 135240 6351 2132;1595 6114 14742;14743;14744;14745;14746;14747;14748;14749;14750;14751;14752 17013;17014;17015;17016;17017;17018;17019;17020;17021;17022;17023;17024 17017 605 12 FLMANGQLVK Unmodified 1119.6111 0.61105057 1595;2132 Q61598;P50396;D6RI86 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 0 11 0.816 1 1 1 69.009 69.009 2 2.0358E-08 17410 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 146.27 93.099 127.36 85.057 163.34 217.73 284.04 57.587 120 84 162 213 283 56 2 1 2 3 3 1 53228 6352 2132;1595 6114 14753;14754;14755 17025;17026;17027 17027 3 FLNAENAQK Unmodified 1033.5193 0.51925868 1508 P34022;H7BX22 Ranbp1 Ran-specific GTPase-activating protein yes no 0 0 0 0 7.5 0.5 1 1 52.172 52.172 3 0.0010514 15513 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.783 46.061 118.11 64.006 113.24 133.43 101.55 66.392 111 65 111 130 102 65 2 1 1 2 1 1 17757 6353 1508 6115 14756;14757 17028;17029 17028 2 FLNALSLNMIR Unmodified 1290.7118 0.71182725 2621 Q8QZS1;E0CX19 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 0 1 0 1 85.34 85.34 2 0.027502 30125 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.683 22.31 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2003.9 6354 2621 6116 14758 17030 17030 1 FLNHFANYR Unmodified 1180.5778 0.57777661 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 11 0 1 52.296 52.296 2 0.0077485 12588 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.379 48.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6355 141 6117 14759 17031 17031 1 FLNLLGDTITLK Unmodified 1346.781 0.78095267 70 A0A0A6YXP5;A2AHW8;Q3V0G7 Garnl3 GTPase-activating Rap/Ran-GAP domain-like protein 3 yes no 0 0 0 0 11 0 1 94.041 94.041 3 0.002736 30400 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.967 28.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2484.3 6356 70 6118 14760 17032 17032 1 FLNQLLER Unmodified 1031.5764 0.57637963 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 0 9 0 1 73.192 73.192 2 0.054821 24123 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.679 34.79 0 39.368 0 50.278 0 59.696 0 37 0 46 0 56 0 1 0 1 0 1 8450.7 6357 1115 6119 14761 17033 17033 1 FLNSQIYK Unmodified 1011.5389 0.53893149 1102 Q9QZB0;G5E8E0 Rgs17 Regulator of G-protein signaling 17 yes no 0 0 0 0 10.5 0.5 1 1 62.968 62.968 2 0.0018294 16855 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 131.06 81.023 69.42 97.915 36.609 31.843 50.578 37.999 65 97 37 32 51 37 1 2 1 1 1 1 19070 6358 1102 6120 14762;14763 17034;17035 17035 2 FLNWIAPNL Unmodified 1086.5862 0.58621603 3403 Q9Z2Z6 Slc25a20 Mitochondrial carnitine/acylcarnitine carrier protein yes yes 0 0 0 0 12 0 1 104.01 104.01 2 0.0040635 29057 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.029 74.976 9.5607 0 16.182 0 6 9.594 9 0 15 0 6 9 1 0 1 0 1 1 5079.4 6359 3403 6121 14764 17036;17037 17036 2 FLPFSFEHIR Unmodified 1291.6713 0.67134264 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 11.5 1.12 1 1 1 1 73.16 73.16 3 3.5217E-22 22061 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 186.78 116.73 119.45 142.33 221.72 57.948 27.983 227.06 112 139 213 56 28 213 3 4 5 2 1 4 258440 6360 1151 6122 14765;14766;14767;14768 17038;17039;17040;17041;17042;17043 17038 6 FLPGMAVGFSSSK Unmodified 1326.6642 0.66420836 2181 Q64674 Srm Spermidine synthase yes yes 0 0 0 0 9 4.64 1 1 2 77.608 77.608 2;3 1.6858E-10 20899 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 116.77 77.744 20.387 8.0828 148.62 49.709 65.992 19.475 19 9 139 47 65 19 1 1 3 2 2 1 28887 6361 2181 6123 14769;14770;14771;14772 17044;17045;17046;17047 17047 4 FLPLFDR Unmodified 906.49634 0.49633839 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 11 1.41 1 1 1 1 1 79.092 79.092 2 0.0058655 24748 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.85 70.96 929.77 1046.7 918.89 1244 1063.8 929.04 874 1047 922 1203 1073 900 3 3 4 5 3 4 721800 6362 2175 6124 14773;14774;14775;14776;14777 17048;17049;17050;17051;17052;17053 17049 6 FLPLITDILAAPPSVGVDISR Unmodified 2193.2409 0.24090556 2371 Q8BG40 Katnb1 Katanin p80 WD40 repeat-containing subunit B1 yes yes 0 0 0 0 11 0 1 109.32 109.32 3 4.3375E-06 35643 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.49 46.969 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 1037 6363 2371 6125 14778 17054 17054 1 FLPLTQV Unmodified 816.47454 0.47454032 3287 Q9QZB9 Dctn5 Dynactin subunit 5 yes yes 0 0 0 0 11.5 1.5 1 1 86.865 86.865 2 0.029923 34109 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.344 69.417 0 20.216 0 30.256 74.484 0 0 19 0 28 75 0 0 1 0 1 2 0 15721 6364 3287 6126 14779;14780 17055;17056 17056 2 FLPNAPK Unmodified 785.44357 0.44357454 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 10 0.816 1 1 1 56.832 56.832 2 0.027111 14243 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.591 46.126 230.12 51.048 233.37 149.6 177.66 340.31 216 53 223 149 185 324 3 1 2 2 2 3 30554 6365 2744 6127 14781;14782;14783 17057;17058;17059 17059 3 FLPPVLLK Unmodified 925.60008 0.60007518 492 A2ALV7;Q6PDI5;A2ALV8;A2ALV6;A2ALV9;A2ALW1 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 6.5 5.5 1 1 83.807 83.807 2 0.015332 29477 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.801 51.865 69.196 43.35 55.55 46.967 0 0 65 46 56 46 0 0 1 1 1 1 0 0 3176.7 6366 492 6128 14784;14785 17060;17061 17060 2 FLPSLAQSALEK Unmodified 1302.7184 0.71835242 2521 Q8CC88 Vwa8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 0 10 0 1 79.755 79.755 3 0.00019473 24940 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.326 51.944 30.044 0 0 61.208 0 0 28 0 0 56 0 0 1 0 0 1 0 0 2441.6 6367 2521 6129 14786 17062 17062 1 FLPSPVVIK Unmodified 998.61645 0.61645353 3245 Q9JLV5;E9Q4T8;F6UY44 Cul3 Cullin-3 yes no 0 0 0 0 1 0 1 75.313 75.313 3 0.022736 25959 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.283 27.381 0 19.892 19.365 0 19.874 0 0 19 19 0 19 0 0 1 1 0 1 0 1469.7 6368 3245 6130 14787 17063 17063 1 FLQASEDLLK Unmodified 1162.6234 0.6233894 866;1385 E9PZF0;Q5NC79;P15532;Q5NC80 Gm20390;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 0 0 8.6 2.42 1 1 1 1 1 76.509 76.509 3 2.6196E-05 26335 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.95 47.346 204.16 216.2 110.08 254.52 182.29 192.01 194 213 111 242 186 185 4 3 1 4 2 3 75296 6369 866;1385 6131 14788;14789;14790;14791;14792 17064;17065;17066;17067;17068 17066 5 FLQDCQELSLWINEK Unmodified 1921.9244 0.9243988 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6 0 1 89.046 89.046 3 8.064E-05 33595 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.519 70.835 0 29.315 28.537 0 28.62 19.437 0 28 28 0 28 19 0 1 1 0 1 1 3734.1 6370 2148 6132 14793 17069 17069 1 FLQENLAPK Unmodified 1058.576 0.57604528 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 63.344 63.344 2 0.0059192 20067 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.95 44.93 68.606 130.17 146.99 112 88.135 85.963 65 129 148 112 92 83 1 2 2 2 2 2 15159 6371 3202 6133 14794;14795 17070;17071 17071 2 FLQESFNNDR Unmodified 1268.5786 0.57856447 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 7 0 1 58.357 58.357 2 0.011086 18484 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.734 35.335 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6372 3245 6134 14796 17072 17072 1 FLQPGSQR Unmodified 931.48756 0.48756462 1445 P24472;P30115 Gsta4;Gsta3 Glutathione S-transferase A4;Glutathione S-transferase A3 no no 0 0 0 0 9 0 1 44.77 44.77 2 0.026742 10844 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.255 34.713 59.428 142.95 56.44 0 125.52 0 56 139 56 0 120 0 1 2 1 0 1 0 32851 6373 1445 6135 14797 17073;17074 17074 2 FLQPVQK Unmodified 858.49634 0.49633839 880 E9Q1S3;Q01405 Sec23a Protein transport protein Sec23A yes no 0 0 0 0 10.5 0.5 1 1 57.761 57.761 2 0.0059544 14635 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.72 67.852 148.17 0 164.03 138.76 180.46 133.43 139 0 158 139 183 130 1 0 1 1 1 1 24789 6374 880 6136 14798;14799 17075;17076 17076 2 FLQSAFLQR Unmodified 1108.6029 0.60292873 2190 Q69ZK0 Prex1 Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein yes yes 0 0 0 0 12 0 1 69.834 69.834 2 0.0057741 17708 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.23 38.152 59.627 0 77.49 51.125 0 63.96 56 0 74 51 0 60 1 0 1 1 0 1 5479.5 6375 2190 6137 14800 17077 17077 1 FLQVFVQPANVAITK Unmodified 1673.9505 0.95047762 1079 H7BX46;G3X932;P59281 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 6.5 5.5 1 1 86.602 86.602 3 8.8684E-05 24171 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.729 46.812 29.904 27.776 30.296 30.079 37.32 0 28 28 28 28 37 0 1 1 1 1 2 0 5772.9 6376 1079 6138 14801;14802 17078;17079 17079 2 FLRPHYGK Unmodified 1016.5556 0.55558461 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 1 12 0 1 41.542 41.542 4 0.014354 7135 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.836 30.95 118.07 68.846 366.4 0 334.37 162.47 111 74 343 0 325 158 1 1 2 0 2 1 17685 6377 2697 6139 14803 17080;17081 17081 2 FLSAHLK Unmodified 814.47012 0.47012364 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 0 11.5 0.5 1 1 52.063 52.063 3 0.015972 12498 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.915 27.413 0 39.368 0 161.28 0 0 0 37 0 157 0 0 0 1 0 2 0 0 49546 6378 48 6140 14804;14805 17082;17083 17082 2 FLSDVYPDGFK Unmodified 1286.6183 0.61830402 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 78.134 78.134 2;3 0.0011208 27074 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.294 33.31 0 39.1 16.015 49.324 0 39.442 0 37 19 46 0 37 0 1 1 1 0 1 3091.4 6379 2782 6141 14806;14807 17084;17085 17085 2 FLSEHPGGEEVLLEQAGADATESFEDVGHSPDAR Unmodified 3595.6339 0.63391368 2946 Q9CQX2 Cyb5b Cytochrome b5 type B yes yes 0 0 0 0 3 0 2 79.09 79.09 4;5 8.003E-21 29850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.876 69.216 9.657 9.576 0 0 0 29.848 9 9 0 0 0 28 1 1 0 0 0 2 4619.9 6380 2946 6142 14808;14809 17086;17087 17086 2 FLSEVLEAQEAQSQLLVPEQK Unmodified 2385.2428 0.24275605 2206 Q6NVF0 Ocrl Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 0 6 0 1 91.756 91.756 4 0.039074 34739 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 29.384 14.77 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 2036.5 6381 2206 6143 14810 17088 17088 1 FLSFSSLESLSSELEQTK Unmodified 2031.0048 0.0048171915 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 8 0 1 97.974 97.974 3 1.6243E-06 35168 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.558 53.858 6.2436 11.97 22.53 11.773 0 0 6 12 22 12 0 0 1 1 1 1 0 0 713.79 6382 305 6144 14811 17089 17089 1 FLSHLVDGVK Unmodified 1113.6182 0.61824444 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 0 10 0 1 66.838 66.838 3 0.00074645 19020 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.974 45.442 0 58.876 42.372 86.813 73.416 0 0 56 46 83 74 0 0 1 1 1 1 0 5126.9 6383 383 6145 14812 17090 17090 1 FLSHWDHITR Unmodified 1310.652 0.65200419 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 9 0 1 52.798 52.798 3 0.0079313 14441 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.286 34.079 60.088 0 0 59.252 103.97 0 56 0 0 56 102 0 1 0 0 1 1 0 4972.1 6384 2401 6146 14813 17091 17091 1 FLSLEYSPVGK Unmodified 1238.6547 0.65468953 1079 H7BX46;G3X932;P59281 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 9 0 1 76.414 76.414 2 0.0039113 25647 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.595 32.063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6385 1079 6147 14814 17092 17092 1 FLSPLQQNLLK Unmodified 1299.7551 0.75507227 2219 Q6P5E4;G3UZU8 Uggt1 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 0 11.5 0.5 1 1 78.85 78.85 3 0.00058957 24056 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.944 45.857 39.366 105.24 37.71 0 29.288 39.442 37 102 37 0 28 37 1 2 1 0 1 1 11101 6386 2219 6148 14815;14816 17093;17094 17093 2 FLSQIESDR Unmodified 1093.5404 0.54038805 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 9 2.94 1 1 1 60.118 60.118 2 3.6206E-05 21048 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.66 24.44 381.01 62.957 472.08 326.2 396.12 303.71 358 65 455 331 403 293 3 1 3 3 3 2 113380 6387 1055 6149 14817;14818;14819 17095;17096;17097 17097 3 FLSQPFQVAEVFTGHMGK Unmodified 2022.0033 0.003317824 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.8 3.19 1 2 2 2 2 1 86.595 86.595 3;4 2.2916E-19 27485 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 131.25 112.95 676.62 476.46 368.78 636.38 589.18 470.4 632 479 361 603 578 442 5 10 7 8 4 7 484700 6388 1642 6150 14820;14821;14822;14823;14824;14825;14826;14827;14828;14829 17098;17099;17100;17101;17102;17103;17104;17105;17106;17107;17108;17109;17110;17111;17112;17113 17109 16 FLSQPFQVAEVFTGHMGK Oxidation (M) 2037.9982 0.99823245 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 1 0 9.5 0.5 1 1 81.279 81.279 3 4.4352E-06 25605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.837 54.344 39.511 37.768 0 85.57 41.316 92.629 37 38 0 79 42 88 1 1 0 2 1 2 21536 6389 1642 6150 14830;14831 17114;17115 17115 110 2 FLTALAQDGVINEEALSVTELDR Unmodified 2503.2806 0.28059812 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 6 0 1 95.79 95.79 3 8.3821E-12 36173 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.569 57.248 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 3050.5 6390 3327 6151 14832 17116 17116 1 FLTCSVEDGELIFR Unmodified 1684.8131 0.81305744 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 9 2.83 2 1 83.5 83.5 2;3 1.0248E-48 32400 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 165.63 122.91 49.176 36.052 0 40.441 0 0 46 37 0 37 0 0 1 1 0 1 0 0 6520 6391 2582 6152 14833;14834;14835 17117;17118;17119 17119 3 FLTEELSLDQDR Unmodified 1464.7096 0.70963822 1182 O35215;G3UZN1 Ddt D-dopachrome decarboxylase no no 0 0 0 0 4.5 0.5 1 1 73.593 73.593 3 3.0158E-05 26983 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.697 73.671 20.273 0 19.166 28.955 26.959 38.079 19 0 19 28 28 37 1 0 1 1 1 2 14761 6392 1182 6153 14836;14837 17120;17121 17121 2 FLTGSYQVLEK Unmodified 1283.6762 0.67615325 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 9.67 0.471 1 2 72.715 72.715 2;3 0.022634 21916 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.084 10.138 59.5 27.324 104.23 94.232 64.05 38.963 56 28 102 93 65 37 2 1 3 3 2 1 10467 6393 1980 6154 14838;14839;14840 17122;17123;17124 17124 3 FLTLGSK Unmodified 764.44324 0.44324019 1250;3345;369 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb4.1l2;Epb41l2;Epb41l3;Epb4.1l3 Band 4.1-like protein 2;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 9.25 4.82 1 1 1 1 65.727 65.727 2 0.0059171 18004 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.28 43.487 362.04 360.56 266.11 1475.6 332.33 430.77 340 366 268 1463 335 413 2 3 2 4 2 3 396480 6394 1250;369;3345 6155 14841;14842;14843;14844 17125;17126;17127;17128;17129 17126 5 FLTLNIMNK Unmodified 1092.6002 0.60015154 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 1 0 1 80.996 80.996 2 0.0008516 28242 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.71 52.734 39.474 0 38.174 37.293 46.403 0 37 0 37 37 46 0 1 0 1 1 1 0 3392.4 6395 2490 6156 14845 17130 17130 1 FLTSQQLFK Unmodified 1110.6073 0.6073454 1085 G3X9K3 Arfgef1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes yes 0 0 0 0 11 0 1 72.328 72.328 2 0.018735 21169 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 8.9142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6396 1085 6157 14846 17131 17131 1 FLTTTPNSLLVSWQAPR Deamidation (N) 1931.0153 0.015262719 28 B7ZNJ1;A0A087WS56;B9EHT6;A0A087WSN6;Q3UHL6;A0A087WR50;P11276;A0A087WS99 Fn1 Fibronectin;Anastellin yes no 0 1 0 0 12 0 1 85.918 85.918 3 8.62E-05 24059 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.918 50.717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6397 28 6158 14847 17132 17132 5 1 FLTTYDR Unmodified 914.44978 0.44978213 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 8 0 1 54.791 54.791 2 0.027718 16090 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.602 6.6163 98.793 90.778 90.476 94.4 98.718 105.92 93 93 93 93 102 102 1 1 1 1 1 1 9308.1 6398 2334 6159 14848 17133 17133 1 FLVFNSK Unmodified 853.46979 0.46978929 583 B1ASZ3;Q64516;Q9WU65 Gyk;Gk;Gk2 Glycerol kinase;Glycerol kinase 2 yes no 0 0 0 0 6.5 5.5 1 1 70.917 70.917 2 0.0054141 24045 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.06 0 295.63 157.82 314.19 254.77 161.36 229.92 278 172 311 253 173 220 2 2 2 2 2 2 54420 6399 583 6160 14849;14850 17134;17135 17134 2 FLVFVANFDENDPK Unmodified 1653.8039 0.80387296 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 10.5 1.26 2 6 2 2 95.377 95.377 3;4 2.0265E-07 29597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.235 45.647 196.44 300.25 250.87 312.84 198.29 397.33 185 298 250 301 205 381 3 6 4 6 4 7 124620 6400 1595 6161 14851;14852;14853;14854;14855;14856;14857;14858;14859;14860;14861;14862 17136;17137;17138;17139;17140;17141;17142;17143;17144;17145;17146;17147;17148;17149;17150;17151 17143 16 FLVFVANFDENDPK Deamidation (N) 1654.7879 0.78788854 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 1 0 0 11 0 1 91.801 91.801 3 0.031047 29449 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.052 25.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6401 1595 6161 14863 17152 17152 606 1 FLVGHLK Unmodified 812.49086 0.49085908 574 B1AQY2;Q69ZH9;F8VQ11;D6RDB5 Arhgap23 Rho GTPase-activating protein 23 yes no 0 0 0 0 11 0 1 55.308 55.308 3 0.03973 13732 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.683 9.617 0 0 0 69.827 64.782 0 0 0 0 65 65 0 0 0 0 1 1 0 7075.6 6402 574 6162 14864 17153 17153 1 FLVGPDGVPVRR Unmodified 1310.7459 0.74590457 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 1 9 0 1 55.885 55.885 3 0.047768 15936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.73 30.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6403 54 6163 14865 17154 17154 1 FLVGPYQNTIGAAFVAK Unmodified 1794.9669 0.96685596 1517 P35290 Rab24 Ras-related protein Rab-24 yes yes 0 0 0 0 12 0 1 85.914 85.914 3 2.2953E-08 24050 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.07 88.016 26.654 0 28.765 31.35 43.538 0 25 0 28 31 43 0 1 0 1 1 1 0 6090.3 6404 1517 6164 14866 17155 17155 1 FLVGTQSLK Unmodified 991.57023 0.57023162 348 A0A217FL60;A0A1Y7VN36;Q8K0G5 Tssc1 Protein TSSC1 yes no 0 0 0 0 11.5 0.5 1 1 65.962 65.962 2 5.6085E-06 18112 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 156.01 55.94 208.36 0 146.95 70.798 215.88 106.72 195 0 139 74 213 102 2 0 1 1 2 1 34144 6405 348 6165 14867;14868 17156;17157 17156 2 FLVHNVK Unmodified 855.49667 0.49667274 1756 P62911 Rpl32 60S ribosomal protein L32 yes yes 0 0 0 0 11.5 0.5 1 1 47.887 47.887 3 0.027944 10635 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.205 30.693 494.69 205.15 0 239.37 0 562.85 462 209 0 219 0 528 2 1 0 1 0 2 46368 6406 1756 6166 14869;14870 17158;17159 17158 2 FLVIGNAGTGK Unmodified 1075.6026 0.60259438 1633 P56371 Rab4a Ras-related protein Rab-4A yes yes 0 0 0 0 1 0 1 67.837 67.837 3 0.032864 22902 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 44.425 12.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6407 1633 6167 14871 17160 17160 1 FLVIGSAGTGK Unmodified 1048.5917 0.59169534 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B no no 0 0 0 0 6 5 1 1 68.114 68.114 2 0.0013267 23139 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.298 44.052 0 84.056 41.116 88.159 136.11 49.036 0 79 38 83 134 46 0 1 1 1 1 1 12630 6408 2785 6168 14872;14873 17161;17162 17161 2 FLVLDEADGLLSQGYSDFINR Unmodified 2371.1696 0.16959111 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 6 0 1 104.02 104.02 3 1.2463E-17 37725 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.49 109.6 6.408 5.9519 0 2.0738 5.9669 6.2257 6 6 0 2 6 6 1 1 0 1 1 1 1339.9 6409 2744 6169 14874 17163 17163 1 FLVLNPAK Unmodified 900.54329 0.54328858 2557 Q8CIP4 Mark4 MAP/microtubule affinity-regulating kinase 4 yes yes 0 0 0 0 12 0 1 69.932 69.932 2 0.010567 17728 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.964 24.141 98.729 79.808 110.49 0 135.9 124.04 93 83 107 0 134 120 1 1 1 0 1 1 8435.5 6410 2557 6170 14875 17164 17164 1 FLVLNPVK Unmodified 928.57459 0.57458871 351 Q03141;A0A1Y7VNZ6 Mark3 MAP/microtubule affinity-regulating kinase 3 yes no 0 0 0 0 6.5 5.5 1 1 74.245 74.245 2 0.0054555 19294 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.25 55.693 48.697 55.227 93.678 76.085 16.301 108.27 46 56 93 75 18 102 1 1 2 2 1 2 11274 6411 351 6171 14876;14877 17165;17166 17166 2 FLVPDHVNMSELIK Unmodified 1640.8596 0.8596137 2943 Q9CQV6;M0QWC2 Map1lc3b Microtubule-associated proteins 1A/1B light chain 3B yes no 0 0 0 0 8.5 0.5 1 1 76.846 76.846 4 0.00041194 25809 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.498 43.964 0 69.16 0 49.593 36.424 69.29 0 65 0 46 37 65 0 2 0 1 1 1 6085.8 6412 2943 6172 14878;14879 17167;17168 17168 2 FLVPDHVNMSELVK Unmodified 1626.844 0.84396364 2745 Q91VR7 Map1lc3a Microtubule-associated proteins 1A/1B light chain 3A yes yes 0 0 0 0 8 0 1 73.97 73.97 3 0.0043637 25322 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.12 20.144 39.701 0 0 0 0 49.036 37 0 0 0 0 46 1 0 0 0 0 1 17442 6413 2745 6173 14880 17169 17169 1 FLVPLGITNIAIDFGEQALNR Unmodified 2300.2529 0.25286723 3207 Q9JHZ2 Ankh Progressive ankylosis protein yes yes 0 0 0 0 11 0 1 111.82 111.82 3 0.00069779 36088 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.164 26.858 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 999.81 6414 3207 6174 14881 17170 17170 1 FLVTVIK Unmodified 818.52658 0.52657589 2222 Q6P5F9;F6YA11 Xpo1 Exportin-1 yes no 0 0 0 0 6.5 5.5 1 1 74.534 74.534 2 0.017375 25631 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.63 56.923 248.66 54.9 0 160.56 64.201 57.864 232 56 0 148 65 56 2 1 0 2 1 1 32312 6415 2222 6175 14882;14883 17171;17172 17171 2 FLVVAHDDGR Unmodified 1127.5724 0.57235688 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 49.928 49.928 3 6.8856E-06 13817 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.8 97.642 49.886 303.69 180.48 409.81 272.94 147.38 47 288 176 389 274 139 2 4 4 6 3 3 90569 6416 2131 6176 14884;14885;14886;14887;14888 17173;17174;17175;17176;17177;17178;17179 17176 7 FLVWDHDPIGR Unmodified 1353.683 0.68296996 498 H3BIW6;F7C3A0;A2AP18;A0A087WSR3;H3BK11;F7C512;H3BKE1;A0A0A0MQM2;I1E4X4;H3BKK4;I1E4X6;Q4KWH5 Plch2;Plch1 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 yes no 0 0 0 0 8 0 1 69.446 69.446 3 0.005102 23085 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.259 27.144 39.414 56.926 0 0 0 59.696 37 56 0 0 0 56 1 1 0 0 0 1 3318 6417 498 6177 14889 17180 17180 1 FLVYDYDSSGK Unmodified 1292.5925 0.5924832 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 9.33 2.62 1 1 1 70.839 70.839 2 7.0622E-14 23695 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 156.83 140.94 148.92 48.367 72.529 157.36 62.255 165.59 139 46 74 149 65 157 2 1 2 3 1 3 29264 6418 3371 6178 14890;14891;14892 17181;17182;17183 17182 3 FLVYVANFDEKDPR Unmodified 1711.857 0.85697116 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 10.6 1.36 1 2 1 1 75.866 75.866 3;4 0.0018445 25488 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.092 45.848 484.21 164.24 353.23 249.87 417 463.54 454 176 345 242 416 444 5 2 3 3 4 4 94550 6419 2132 6179 14893;14894;14895;14896;14897 17184;17185;17186;17187;17188 17184 5 FLWEVGEAEAWVR Unmodified 1590.7831 0.78307794 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7 0 1 91.304 91.304 2 3.2793E-06 33829 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.979 55.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6420 2186 6180 14898 17189 17189 1 FLWPGFGENAR Unmodified 1292.6302 0.63020611 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 10.8 0.829 2 1 1 79.544 79.544 2;3 0.0015471 24346 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.862 33.607 130.65 52.246 205.15 110.42 80.709 80.579 123 51 196 111 81 77 3 2 3 2 3 2 34968 6421 172 6181 14899;14900;14901;14902 17190;17191;17192;17193 17192 4 FLYECPWR Unmodified 1169.5328 0.53280025 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 9 0 1 70.421 70.421 2 0.024041 22795 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.854 50.682 48.76 55.4 53.631 76.118 83.321 0 46 56 56 74 83 0 1 1 1 1 1 0 10134 6422 974 6182 14903 17194 17194 1 FLYEELGLDSTDAFEALKK Unmodified 2188.094 0.09396655 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 1 7 0 1 90.665 90.665 4 0.0038158 33502 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.386 26.132 0 0 29.449 19.012 0 29.848 0 0 28 19 0 28 0 0 1 1 0 1 995.17 6423 2490 6183 14904 17195 17195 1 FLYLGDDR Unmodified 997.4869 0.48689592 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 7 0 1 67.779 67.779 2 0.0054004 22869 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.5 82.781 98.286 108.79 160.44 78.406 146.26 144 93 111 158 83 148 139 1 1 1 1 1 1 20786 6424 3307 6184 14905 17196 17196 1 FLYMWPNAR Unmodified 1196.5801 0.5800848 1993 Q3ULD5;Q6PD20 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 1 0 1 78.544 78.544 2 0.0011728 27355 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.2 69.292 32.943 27.056 30.792 21.561 34.574 0 31 28 31 22 34 0 1 1 1 1 1 0 4457.8 6425 1993 6185 14906 17197 17197 1 FLYYEMGYK Unmodified 1212.5525 0.55253264 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 10 0.816 1 1 1 75.359 75.359 2;3 0.00082159 22787 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.89 79.45 89.354 66.847 107.53 56.878 46.051 38.128 84 65 102 56 46 37 2 2 2 2 1 1 14287 6426 2179 6186 14907;14908;14909 17198;17199;17200 17199 3 FMALICEASGGGAFLVLPLGK Unmodified 2150.1268 0.12680378 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57;G3UX53;D3YXM2 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 12 0 3 108.42 108.42 3;4 2.9055E-09 29684 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.795 67.137 52.331 25.513 45.813 0 24.423 40.08 49 26 44 0 24 38 3 2 4 0 2 2 2635.1 6427 1289 6187 14910;14911;14912 17201;17202;17203;17204;17205 17201 5 FMATNDLMTELQK Unmodified 1540.7266 0.72655062 2264 Q6ZQ38;D3YWC5 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 0 0 0 13 0 1 79.136 79.136 3 0.0020463 30475 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.196 23.968 48.804 44.731 55.137 56.692 65.386 0 46 46 56 56 65 0 1 1 1 1 1 0 3822.9 6428 2264 6188 14913 17206 17206 1 FMATYLR Unmodified 900.45276 0.45275902 1388 P16054;P23298 Prkce;Prkch Protein kinase C epsilon type;Protein kinase C eta type yes no 0 0 0 0 11 0 1 61.879 61.879 2 0.040208 16401 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.146 52.349 0 0 120.1 0 125.52 0 0 0 111 0 120 0 0 0 1 0 1 0 17664 6429 1388 6189 14914 17207 17207 1 FMDEFFEQVEEIR Unmodified 1717.7658 0.76577289 1197 O35526;D6RFB9;A0A0J9YUA0 Stx1a Syntaxin-1A yes no 0 0 0 0 7 3.54 1 1 1 1 94.982 94.982 3 4.9643E-05 34345 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.591 78.412 5.3458 39.222 21.714 19.152 41.84 20.254 5 37 21 18 40 19 1 2 3 2 3 1 14175 6430 1197 6190 14915;14916;14917;14918 17208;17209;17210;17211;17212 17208 5 FMELLEPLSER Unmodified 1362.6853 0.68533773 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 86.638 86.638 2;3 1.6474E-07 32476 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.7 75.856 67.044 0 19.285 28.58 93.519 38.115 65 0 19 28 93 37 3 0 1 1 2 3 25929 6431 2148 6191 14919;14920;14921;14922 17213;17214;17215;17216;17217 17213 5 FMEQVIFK Unmodified 1040.5365 0.53648865 2836 Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WP86;A0A087WS98;A0A087WQ83 Actr3 Actin-related protein 3 yes no 0 0 0 0 10.7 1.7 1 1 1 76.345 76.345 2;3 0.0066145 23381 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.223 32.93 236.45 178.5 143.31 0 149.87 262.22 222 185 139 0 148 250 2 2 1 0 1 2 46282 6432 2836 6192 14923;14924;14925 17218;17219;17220 17219 3 FMEQVVFK Unmodified 1026.5208 0.52083858 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 9 0 1 72.874 72.874 2 0.058744 24043 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.91 16.272 128.07 0 115.32 92.849 102.43 0 120 0 111 93 102 0 1 0 1 1 1 0 9351.9 6433 2170 6193 14926 17221 17221 1 FMHNQFLK Unmodified 1063.5273 0.52732094 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGR1 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 10 0 1 55.586 55.586 3 0.025102 13999 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.335 25.217 68.99 53.568 81.572 104.89 92.46 0 65 56 83 102 93 0 1 1 1 1 1 0 5057.6 6434 204 6194 14927 17222 17222 1 FMIYELFTR Unmodified 1218.6107 0.61071622 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 12 0 1 91.287 91.287 2 0.0039594 26020 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.37 66.239 23.369 24.707 18.958 0 23.012 0 22 25 19 0 22 0 1 1 1 0 1 0 3829.4 6435 2451 6195 14928 17223 17223 1 FMNPFNLPNLYQK Unmodified 1624.8072 0.8071842 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 4.83 5.43 4 1 1 90.419 90.419 2;3;4 1.0322E-15 31799 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 136.96 106.47 74.821 96.926 97.229 111.64 138.71 194.21 70 94 97 107 140 185 4 5 5 5 6 7 27984 6436 2092 6196 14929;14930;14931;14932;14933;14934 17224;17225;17226;17227;17228;17229;17230;17231;17232;17233;17234 17224 11 FMPESPR Unmodified 862.40072 0.40072345 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 8.67 3.09 1 1 1 48.072 48.072 2 0.01862 13692 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.98 52.436 256.39 106.65 280.52 282.48 247.31 309.55 241 111 278 278 259 297 3 2 3 3 3 3 22327 6437 2370 6197 14935;14936;14937 17235;17236;17237 17236 3 FMPIVYTPTVGLACQHYGLTFR Unmodified 2570.2814 0.28140694 2432 Q8BMF3;A0A140LHQ4 Me3 NADP-dependent malic enzyme, mitochondrial yes no 0 0 0 0 12 0 1 83.912 83.912 3 0.00082957 23346 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.639 34.452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2954.3 6438 2432 6198 14938 17238 17238 1 FMPIVYTPTVGLACQQYSLAFR Unmodified 2561.2811 0.28107259 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 6.5 5.5 2 2 94.204 94.204 3;4 2.817E-13 26910 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.467 66.011 20.33 5.32 12.881 0 6.0623 31.807 19 5 12 0 6 30 1 1 2 0 1 3 7619.1 6439 1317 6199 14939;14940;14941;14942 17239;17240;17241;17242 17242 4 FMQQWLETR Unmodified 1237.5914 0.59137776 1635 P56376;E9QJT5 Acyp1 Acylphosphatase-1;Acylphosphatase yes no 0 0 0 0 10 0 1 72.895 72.895 2 0.0061595 21900 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.163 53.067 59.808 55.551 0 70.201 44.891 0 56 56 0 65 46 0 1 1 0 1 1 0 8514.1 6440 1635 6200 14943 17243 17243 1 FMQTFVLAPEGSVPNK Unmodified 1763.8916 0.89164211 1847 P97379;A0A0J9YTQ8 G3bp2 Ras GTPase-activating protein-binding protein 2 yes no 0 0 0 0 11.5 1.5 1 1 80.342 80.342 3 0.0015541 25131 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.053 39.677 88.834 0 37.751 77.394 65.841 0 83 0 37 74 65 0 2 0 1 2 1 0 4270.1 6441 1847 6201 14944;14945 17244;17245;17246 17244 3 FMTLLGHSR Unmodified 1060.5488 0.54878467 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 6.5 5.5 1 1 58.503 58.503 3 0.0001946 13406 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.15 90.916 97.924 41.773 97.626 0 67.99 49.036 92 47 93 0 65 46 2 2 2 0 1 1 11666 6442 628 6202 14946;14947 17247;17248 17248 2 FMVQTIFAPPNISDMEAVWK Unmodified 2323.1381 0.13809675 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 0 11 0 1 102.37 102.37 3 0.042188 34013 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.094 17.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2691.4 6443 3343 6203 14948 17249 17249 1 FMYGPLDVVTLTGEK Unmodified 1668.8433 0.84329493 1215 O35954 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 0 0 0 0 9 0 1 89.922 89.922 3 0.00093722 31783 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.569 43.943 20.244 28.427 0 30.256 18.484 0 19 28 0 28 19 0 1 1 0 1 1 0 2182.6 6444 1215 6204 14949 17250 17250 1 FNADEFEDMVAEK Unmodified 1543.6501 0.65007443 1136 I7HLV2;Q6ZWV3 Rpl10 60S ribosomal protein L10 yes no 0 0 0 0 4 0 1 79.322 79.322 3 8.3346E-05 29640 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.619 51.181 29.814 0 38.623 28.302 0 0 28 0 37 28 0 0 1 0 1 1 0 0 2656.5 6445 1136 6205 14950 17251 17251 1 FNAIALSAA Unmodified 876.47052 0.47051757 3226 Q9JKB1;A0A2I3BQ39;P58321 Uchl3;Uchl4 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase isozyme L4 yes no 0 0 0 0 9 0 1 76.013 76.013 2 0.02166 25469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.565 43.283 0 0 147.59 63.056 151.91 0 0 0 139 65 148 0 0 0 2 1 2 0 13118 6446 3226 6206 14951 17252;17253 17252 2 FNAILCSR Unmodified 979.49094 0.49093544 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 10 0 1 59.528 59.528 2 0.05104 15779 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.216 31.088 0 69.16 0 49.263 53.986 67.749 0 65 0 46 56 65 0 1 0 1 1 1 9146 6447 1848 6207 14952 17254 17254 1 FNAKPGVIDSK Unmodified 1174.6346 0.63462279 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 1 9 0 1 52.126 52.126 3 0.051108 14097 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.481 16.043 0 0 306.21 0 229.65 226.9 0 0 283 0 227 219 0 0 1 0 1 1 16421 6448 690 6208 14953 17255 17255 1 FNALFAQGNYSEAAK Unmodified 1629.7787 0.77872084 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.25 0.829 1 1 2 71.239 71.239 3;4 1.6867E-21 23914 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.14 90.567 413.74 185.6 458.08 374.51 196.37 402.67 389 195 451 371 200 383 3 2 3 3 1 3 47365 6449 2185 6209 14954;14955;14956;14957 17256;17257;17258;17259 17256 4 FNASQLITQR Unmodified 1176.6251 0.62512073 1179 O35129;F6QPR1;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 11.5 1.5 1 1 59.85 59.85 2 5.5578E-05 15965 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.88 68.05 48.814 44.757 53.579 91.614 73.196 0 46 46 56 88 74 0 1 1 1 1 1 0 11397 6450 1179 6210 14958;14959 17260;17261 17260 2 FNDGTDEK Unmodified 924.38249 0.38249043 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 6.4 3.38 2 1 1 1 43.064 43.064 2 0.0038668 12849 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.99 39.692 689.46 635.14 758.28 455.36 490.67 960.32 645 625 751 457 498 914 4 6 5 4 3 5 273480 6451 1881 6211 14960;14961;14962;14963;14964 17262;17263;17264;17265;17266;17267;17268 17262 7 FNEVVSALK Unmodified 1005.5495 0.54949617 831 E9Q175;E9Q3L1;E9PVU0;E9Q174;V9GXM4;V9GX76;Q64331 Myo6 Unconventional myosin-VI yes no 0 0 0 0 9 0 1 70.964 70.964 2 0.044232 23146 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.174 26.92 0 0 0 89.518 63.878 0 0 0 0 83 65 0 0 0 0 1 1 0 3944.6 6452 831 6212 14965 17269 17269 1 FNFLEQAFDK Unmodified 1257.603 0.60298831 221 A0A0R4J2B2;Q6WVG3 Kctd12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 0 11 1.41 2 1 85.971 85.971 2;3 0.00245 33644 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.89 27.476 20.147 67.801 0 57.442 17.268 87.985 19 65 0 56 19 83 1 2 0 2 1 2 14574 6453 221 6213 14966;14967;14968 17270;17271;17272 17272 3 FNGGGHINHTIFWTNLSPK Deamidation (N) 2140.049 0.049022463 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 1 0 0 10.7 1.7 2 2 2 68.329 68.329 3;4 2.7742E-08 19988 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.97 61.185 525.14 233.03 450.13 396.83 406.65 535.56 493 241 440 384 407 512 5 3 4 3 4 4 81658 6454 1336 6214 14969;14970;14971;14972;14973;14974 17273;17274;17275;17276;17277;17278 17275 410 6 FNIIQPGPIK Unmodified 1125.6546 0.65462995 2912 Q9CQ62 Decr1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 11 1.41 2 1 70.613 70.613 2;3 0.00062108 20782 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.749 52.495 107.99 74.258 182.06 75.592 127.87 134.93 102 74 176 74 130 130 2 1 2 1 2 2 23707 6455 2912 6215 14975;14976;14977 17279;17280;17281 17280 3 FNIPDLK Unmodified 845.4647 0.46470391 3376 Q9Z1G3;A0A2I3BPD0 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 10 0 1 70.54 70.54 3 0.019859 20746 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.252 6.271 49.074 56.275 0 0 95.321 56.976 46 56 0 0 93 56 1 1 0 0 1 1 3537.3 6456 3376 6216 14978 17282 17282 1 FNLETEWK Unmodified 1065.5131 0.51311067 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 8 0 1 70.278 70.278 3 0.046544 23452 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.203 9.3157 39.298 26.383 45.413 57.861 34.027 58.725 37 28 46 56 37 56 1 1 1 1 1 1 3545.5 6457 1653 6217 14979 17283 17283 1 FNLISLTSK Unmodified 1021.5808 0.5807963 1084 G3X9J0 Sipa1l3 yes yes 0 0 0 0 12 0 1 76.598 76.598 3 0.0025923 20530 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.349 36.628 29.645 36.768 102.88 115.19 37 59.696 28 37 102 111 37 56 1 1 2 2 1 1 4210.5 6458 1084 6218 14980 17284;17285;17286 17285 3 FNLNDPFLALQR Unmodified 1446.7619 0.76194857 641 B9EJA2;D3Z551;D3Z1E3 Cttnbp2 Cortactin-binding protein 2 yes no 0 0 0 0 9 0 1 83.767 83.767 2 0.0097003 28961 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.149 37.387 39.317 76.085 0 49.072 64.115 47.206 37 74 0 46 65 46 1 1 0 1 1 1 3752.9 6459 641 6219 14981 17287 17287 1 FNLPLGNYK Unmodified 1064.5655 0.56548059 1689 P61148;D3Z192;D3Z6H1;D6RCX9;D3Z6E2 Fgf1 Fibroblast growth factor 1;Fibroblast growth factor yes no 0 0 0 0 10.5 0.5 1 1 71.596 71.596 2;3 0.0012894 21375 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.83 56.016 97.959 121.74 24.128 57.659 225.39 121.49 92 121 28 56 222 120 2 2 1 1 2 2 8963.3 6460 1689 6220 14982;14983 17288;17289 17288 2 FNLTGLNEQVPHYR Unmodified 1686.8478 0.84780346 1789 P67871;G3UZA4;G3UZJ5;G3UZX4;G3UWU5 Csnk2b Casein kinase II subunit beta yes no 0 0 0 0 10.5 2.5 1 1 62.002 62.002 3 1.3711E-21 19675 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.14 111.67 68.713 110.09 202.05 44.657 95.227 88.478 65 111 195 46 93 83 1 2 2 1 1 1 18013 6461 1789 6221 14984;14985 17290;17291 17290 2 FNNFSLNLNTNHGHILVDYSK Unmodified 2446.203 0.20295692 1316 P06745;A0A0U1RP97;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 11 0 1 67.865 67.865 4 0.00047848 19203 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.632 29.378 0 0 59.386 27.065 0 0 0 0 56 28 0 0 0 0 1 1 0 0 15629 6462 1316 6222 14986 17292 17292 1 FNNVAPLK Unmodified 901.50215 0.50215205 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9 0 1 57.744 57.744 2 0.0073025 16831 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.187 57.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6463 1226 6223 14987 17293 17293 1 FNPDATIWTAK Unmodified 1262.6295 0.62953741 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 8 0 1 71.172 71.172 3 0.009515 23862 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.354 26.604 78.87 0 89.408 0 0 69.29 74 0 83 0 0 65 1 0 1 0 0 1 4329.3 6464 732 6224 14988 17294 17294 1 FNPETDFLTGK Unmodified 1267.6085 0.60846762 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7.57 2.44 1 2 1 2 1 72.842 72.842 2;3 2.3017E-08 24601 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.84 83.68 482.71 456.53 423.45 243.82 248.67 527.24 454 464 427 241 249 500 7 6 6 5 4 6 271970 6465 2843 6225 14989;14990;14991;14992;14993;14994;14995 17295;17296;17297;17298;17299;17300;17301;17302;17303 17302 9 FNPFDLISDSEAVQEETTKK Unmodified 2297.1063 0.10632215 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 1 7.5 0.5 1 1 86.891 86.891 4 3.4474E-05 31943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.185 36.931 0 19.758 27.382 38.809 0 0 0 19 28 37 0 0 0 1 1 1 0 0 3011.2 6466 3285 6226 14996;14997 17304;17305 17304 2 FNPVLYPK Unmodified 976.5382 0.53820321 243 Q5SVL6;A0A171EBK8 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 0 10.5 0.5 1 1 65.845 65.845 2 0.00725 18551 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.95 60.635 99.377 81.611 0 0 151.22 104.42 93 83 0 0 148 102 1 1 0 0 1 1 10670 6467 243 6227 14998;14999 17306;17307 17306 2 FNQDPEAEDEGR Unmodified 1405.5746 0.57460131 239 A0A140LJ98;Q4FCQ7;J3QNU1;A0A1L1SQ41;Q9Z2A5 Ate1 Arginyl-tRNA--protein transferase 1 yes no 0 0 0 0 1.5 0.5 1 1 41.875 41.875 2 1.3492E-13 11884 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.49 108.05 9.5169 0 23.542 4.798 18.977 19.712 9 0 22 6 19 19 1 0 1 1 1 1 3155.4 6468 239 6228 15000;15001 17308;17309 17308 2 FNSITSAYYR Unmodified 1220.5826 0.58258722 543 A2CG35;P35283 Rab12 Ras-related protein Rab-12 yes no 0 0 0 0 9 0 1 59.208 59.208 2 0.0030076 17597 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.438 27.888 39.701 0 0 71.045 0 0 37 0 0 65 0 0 1 0 0 1 0 0 2144.9 6469 543 6229 15002 17310 17310 1 FNSLNELVDYHR Unmodified 1505.7263 0.72629134 585 Q60631;B1AT92 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 6 0 1 65.329 65.329 3 3.072E-06 22344 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.03 78.793 0 0 27.673 58.882 35.997 0 0 0 28 56 37 0 0 0 1 1 1 0 7078.7 6470 585 6230 15003 17311 17311 1 FNTYVTLK Unmodified 984.52803 0.52803245 1121 H3BJZ7;Q4KUS2;E9Q263;A0A140LJ69;Q9Z1N9 Unc13a;Unc13b Protein unc-13 homolog A;Protein unc-13 homolog B yes no 0 0 0 0 10 0 1 65.549 65.549 2 0.0081694 18466 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.55 32.045 0 38.484 52.873 0 45.964 62.648 0 37 51 0 46 60 0 1 1 0 1 1 8307 6471 1121 6231 15004 17312 17312 1 FNVGTDDIAIEESNAIINDGK Unmodified 2234.0703 0.070270995 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 0 5 0 1 81.287 81.287 3 9.3797E-11 30776 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.538 54.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6472 2968 6232 15005 17313 17313 1 FNVSATPEQYVPYSTTR Unmodified 1958.9374 0.93740633 219 Q7TMF3;A0A0R4J275 Ndufa12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 0 7.33 0.471 2 1 67.058 67.058 2;3 2.802E-06 22505 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.449 63.621 9 48.188 83.131 84.929 44.414 118.12 9 46 83 83 46 112 1 1 2 2 1 2 33994 6473 219 6233 15006;15007;15008 17314;17315;17316 17314 3 FNVWDTAGQEK Unmodified 1293.599 0.59896556 1744 P62827;Q14AA6;Q61820 Ran;1700009N14Rik;Rasl2-9 GTP-binding nuclear protein Ran;GTP-binding nuclear protein Ran, testis-specific isoform yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 66.231 66.231 2;3 7.6139E-09 22209 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.66 37.392 266.45 340.95 380.5 199 231.34 312.4 251 343 380 195 231 297 3 5 6 4 4 4 87831 6474 1744 6234 15009;15010;15011;15012;15013 17317;17318;17319;17320;17321;17322 17319 6 FNYGFEYLGVQDK Unmodified 1578.7355 0.73545904 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 1 1 1 78.476 78.476 3 7.7677E-05 27907 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.3 38.76 20.387 38.759 36.442 28.432 37.054 77.827 19 37 37 28 37 74 1 1 1 1 1 2 4285.6 6475 3204 6235 15014;15015 17323;17324;17325 17324 3 FPAAQPPDPNQPAK Unmodified 1476.7361 0.73612775 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 7.5 0.5 1 1 54.505 54.505 3 0.00032981 16591 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.964 38.231 29.532 46.169 109.53 50.452 148.72 109.82 28 46 106 51 148 107 1 1 2 1 2 2 22002 6476 3344 6236 15016;15017 17326;17327 17326 2 FPAEDEFPDLSSHNNHMAK Unmodified 2184.9535 0.9534671 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 5.5 1.12 1 1 1 1 59.798 59.798 4 5.4251E-20 20666 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.51 130.15 534.58 390.02 388.86 505.01 735.7 381.1 501 398 381 491 736 370 4 5 4 5 5 3 61846 6477 1883 6237 15018;15019;15020;15021 17328;17329;17330;17331;17332;17333 17329 6 FPAEDEFPDLSSHNNHMAK Deamidation (N) 2185.9375 0.93748268 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 1 0 0 5 0 1 63.903 63.903 4 3.2495E-05 22501 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.145 52.284 44.503 50.395 51.934 0 51.713 47.56 42 51 51 0 51 46 1 1 1 0 1 1 5855.9 6478 1883 6237 15022 17334 17334 773 1 FPAFELGFLQK Unmodified 1295.6914 0.69140938 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 0 0 0 11 0.816 1 1 1 90.511 90.511 3 0.00035441 29096 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.17 46.694 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 35974 6479 985 6238 15023;15024;15025 17335;17336;17337 17336 3 FPAFELGFLQKD Unmodified 1410.7184 0.71835242 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 0 0 1 11 2 1 1 91.7 91.7 3 0.0007612 32515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.451 45.464 79.402 0 0 50.278 0 59.696 74 0 0 46 0 56 2 0 0 1 0 1 10125 6480 985 6239 15026;15027 17338;17339 17338 2 FPAFGFGAR Unmodified 968.48684 0.48683634 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 8 4.97 1 1 1 71.496 71.496 2 0.00023822 18389 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.05 83.238 288.02 937.27 563.57 598.98 596.03 347.52 270 908 576 589 593 326 3 4 1 2 1 2 454100 6481 3371 6240 15028;15029;15030 17340;17341;17342;17343 17343 4 FPAPLYVGEVVLASAEVK Unmodified 1888.0346 0.034601177 1143 J3QMX0 Rpp14 yes yes 0 0 0 0 9 0 1 101.03 101.03 3 5.5776E-05 35969 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.962 42.887 0 8.512 0 0 12.552 0 0 8 0 0 12 0 0 1 0 0 1 0 1064 6482 1143 6241 15031 17344 17344 1 FPCFHGGR Unmodified 976.43375 0.43375491 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9.5 0.5 1 1 44.067 44.067 3 0.0029755 10449 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.097 65.719 0 97.888 0 138.91 111.14 95.967 0 92 0 129 112 93 0 2 0 3 2 3 15537 6483 1226 6242 15032;15033 17345;17346;17347 17345 3 FPDENFK Unmodified 895.40758 0.40758296 1444 P24369 Ppib Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 6 0 1 59.32 59.32 2 0.036372 19742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.191 60.909 99.277 0 85.982 74.606 61.218 97.391 93 0 83 74 65 93 1 0 1 1 1 1 8933.7 6484 1444 6243 15034 17348 17348 1 FPDENFTLK Unmodified 1109.5393 0.53932542 2849 Q99KR7 Ppif Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 0 0 0 7 0 1 70.389 70.389 3 0.003858 24067 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.347 30.123 49.358 0 0 20.087 36.131 48.005 46 0 0 19 37 46 1 0 0 1 1 1 4543.8 6485 2849 6244 15035 17349 17349 1 FPDYLTVSPPIGDLQAFYK Unmodified 2170.0987 0.098657997 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9 0 1 96.849 96.849 3 4.5311E-05 34674 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.964 39.81 20.292 18.848 0 0 0 39.442 19 19 0 0 0 37 1 1 0 0 0 1 2098.5 6486 3025 6245 15036 17350 17350 1 FPEDGPELEEVLIQLAAADAR Unmodified 2282.143 0.14304201 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 8 3.56 1 1 1 103.51 103.51 3 4.2957E-30 36181 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.28 126.08 2.1414 0.91961 0 4.1499 1.9219 2.0772 2 1 0 4 2 2 1 1 0 2 1 1 3111.2 6487 2845 6246 15037;15038;15039 17351;17352;17353 17351 3 FPEELTQTFMSCNLITGMFQR Unmodified 2549.1753 0.17528689 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 11 0 1 104.29 104.29 3 2.4226E-07 34531 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.887 58.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2677.6 6488 3094 6247 15040 17354 17354 1 FPEQSTEAPPSDPGYPGAVAPAR Unmodified 2340.1022 0.10223983 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 4.5 0.5 1 1 60.184 60.184 3 0.00013616 20896 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.603 40.07 29.987 37.576 9.5868 0 8.727 20.005 28 37 9 0 9 19 1 2 1 0 1 1 4492.3 6489 1561 6248 15041;15042 17355;17356;17357 17357 3 FPEQSTEAPPSDPGYPGAVAPAREER Unmodified 2754.2885 0.28853705 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 3.5 0.5 1 1 54.393 54.393 4 0.0021868 18702 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 39.215 23.709 59.41 44.73 76.103 46.318 27.492 29.064 56 47 75 47 28 28 2 2 2 2 1 1 5785.2 6490 1561 6249 15043;15044 17358;17359 17358 2 FPFAANSR Unmodified 908.45045 0.45045083 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 11 0 1 56.769 56.769 2 0.051054 14358 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.21 40.319 0 0 0 182.53 0 207.87 0 0 0 167 0 195 0 0 0 1 0 1 46262 6491 1164 6250 15045 17360 17360 1 FPFELVK Unmodified 878.49019 0.49019038 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3;G3UXX2 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 0 0 0 10.8 1.34 1 2 1 1 1 80.005 80.005 2;3 0.010721 24992 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.311 0 6585.5 4618.4 5201 4254.3 5775.7 5910.9 6188 4766 5118 4114 5872 5651 10 8 8 6 9 6 807580 6492 118;1534;1082 6251 15046;15047;15048;15049;15050;15051 17361;17362;17363;17364;17365;17366;17367;17368;17369;17370 17366 10 FPFISLASK Unmodified 1008.5644 0.56441796 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 6.5 5.5 1 1 82.479 82.479 2 0.0047836 22760 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.67 33.816 39.406 0 97.916 32.095 0 118.33 37 0 92 32 0 111 1 0 2 1 0 2 18880 6493 2033 6252 15052;15053 17371;17372 17372 2 FPFNTPK Unmodified 849.43849 0.43848916 2104 Q61024 Asns Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 0 11 0 1 62.952 62.952 2 0.039057 16899 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.451 18.691 0 82.509 92.562 69.9 0 0 0 79 93 69 0 0 0 1 1 1 0 0 6412.8 6494 2104 6253 15054 17373 17373 1 FPGQLNADLR Deamidation (N) 1130.572 0.57202253 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 0 6 0.816 1 1 1 62.937 62.937 2 0.0006425 22231 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.3 71.327 502.49 176.04 517.6 571.43 462.81 595.48 472 176 514 559 477 571 4 1 4 4 3 4 65632 + 6495 1863;647;1795;2283;2805;2975;3072;3183 6254 15055;15056;15057 17374;17375;17376;17377 17374 186 4 FPGQLNADLR Unmodified 1129.588 0.58800695 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 9.44 2.17 1 1 1 2 1 1 1 1 60.699 60.699 2;3 5.1566E-09 18284 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 154.81 88.384 12716 10399 12630 12328 15238 12977 11964 10757 12715 12205 15453 12561 15 19 16 20 20 18 2444100 + 6496 1863;647;1795;2283;2805;2975;3072;3183 6254 15058;15059;15060;15061;15062;15063;15064;15065;15066 17378;17379;17380;17381;17382;17383;17384;17385;17386;17387;17388;17389;17390;17391;17392;17393;17394;17395;17396;17397;17398;17399 17390 22 FPGQLNADLRK Deamidation (N) 1258.667 0.66698555 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 1 10 3 1 1 58.189 58.189 3 1.6386E-06 20109 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.93 59.487 127.13 136.69 341.75 266.71 368.74 358.31 120 139 335 269 376 346 1 1 2 2 2 2 31562 + 6497 1863;647;1795;2283;2805;2975;3072;3183 6255 15067;15068 17400;17401 17401 186 2 FPGQLNADLRK Unmodified 1257.683 0.68296996 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 1 9.83 1.77 2 1 1 1 1 56.598 56.598 3;4 7.9303E-08 17155 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.39 67.179 2703.3 2400.7 3802.2 3092.3 2703.3 3391.1 2546 2469 3782 3076 2798 3252 6 6 7 7 5 7 346200 + 6498 1863;647;1795;2283;2805;2975;3072;3183 6255 15069;15070;15071;15072;15073;15074 17402;17403;17404;17405;17406;17407;17408;17409 17403 8 FPGSVNSAVLHLSPYVNYQFR Unmodified 2394.2121 0.21206505 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 11 0.816 1 1 1 78.086 78.086 3 2.7361E-11 23766 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.36 67.746 0 19.743 28.284 18.565 27.437 29.065 0 19 28 19 28 28 0 1 1 1 1 1 12645 6499 20;2354 6256 15075;15076;15077 17410;17411;17412 17411 3 FPHLFTGK Unmodified 945.50724 0.50723743 2712 Q8VEJ9;P46467 Vps4a;Vps4b Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B yes no 0 0 0 0 12.5 0.5 1 1 60.879 60.879 3 0.0052881 14583 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.127 42.193 88.789 139.89 120.59 91.432 258.35 0 83 139 120 93 251 0 1 2 1 1 2 0 24593 6500 2712 6257 15078;15079 17413;17414 17413 2 FPHWDEVLELR Unmodified 1439.7197 0.7197494 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 6 0 1 76.615 76.615 3 0.021536 27908 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.419 19.143 39.701 0 0 0 28.291 29.041 37 0 0 0 28 28 1 0 0 0 1 1 1651.6 6501 3391 6258 15080 17415 17415 1 FPITTPRPR Unmodified 1083.6189 0.61891314 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 1 11.3 0.471 2 1 46.998 46.998 3 0.0014649 10378 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.25 76.273 0 98.952 0 0 149.87 143.9 0 93 0 0 148 139 0 1 0 0 1 1 8876.8 6502 3194 6259 15081;15082;15083 17416;17417;17418 17417 3 FPLDYYSIPFPTPTTPLTGR Unmodified 2282.1623 0.16232089 83 A0A0H2UH17;A0A0G2JDV6;Q80X50;A0A0G2JFN7 Ubap2l Ubiquitin-associated protein 2-like yes no 0 0 0 0 10.3 1.25 1 1 1 95.529 95.529 3 7.6472E-06 27382 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.49 46.702 25.656 39.816 52.982 18.233 56.57 73.478 24 38 52 19 57 71 2 1 2 1 3 4 8651.5 6503 83 6260 15084;15085;15086 17419;17420;17421;17422 17422 4 FPLFTAVYK Unmodified 1084.5957 0.59571809 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 1 0 1 83.726 83.726 2 0.0037982 29421 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.948 43.23 0 0 60.592 0 0 69.29 0 0 56 0 0 65 0 0 1 0 0 1 5905.6 6504 1368 6261 15087 17423 17423 1 FPLFTAVYQICYEGR Unmodified 1862.9025 0.90254115 1994 Q3ULJ0;D3Z0L6 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes no 0 0 0 0 12 0 1 92.709 92.709 3 0.03085 26523 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.757 24.812 9.657 0 0 40.441 0 9.594 9 0 0 37 0 9 1 0 0 1 0 1 1501.1 6505 1994 6262 15088 17424 17424 1 FPLIEQTYYPNHR Unmodified 1676.8311 0.83109076 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 10.1 1.55 1 2 1 2 1 64.344 64.344 2;3 4.9324E-41 17907 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 193.49 152.09 444.71 467.55 501.5 462.83 338.85 447.69 418 472 501 446 343 426 4 5 5 5 4 4 300630 6506 2173 6263 15089;15090;15091;15092;15093;15094;15095 17425;17426;17427;17428;17429;17430;17431;17432;17433;17434 17431 10 FPLIEQTYYPNHR Deamidation (N) 1677.8151 0.81510635 2173 Q64332 Syn2 Synapsin-2 yes yes 0 1 0 0 10 2.16 1 1 1 68.087 68.087 3 0.00028501 21797 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.912 48.557 98.486 45.631 98.702 133.25 98.877 116.57 92 46 93 129 102 112 2 1 1 3 2 2 28060 6507 2173 6263 15096;15097;15098 17435;17436;17437 17436 851 3 FPLLRPPPK Unmodified 1063.6542 0.65423602 2413 Q8BIJ6;E9PWN2;E9PWN3 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 1 1 0 1 61.309 61.309 3 0.0089676 20218 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.954 42.211 322.31 217.11 287.73 183.12 277.32 330.01 303 229 287 188 284 317 1 1 1 1 1 1 24812 6508 2413 6264 15099 17438 17438 1 FPLPPWHQR Unmodified 1176.6192 0.61924749 3442 yes yes 0 0 0 0 11.7 1.25 1 1 1 69.904 69.904 3 0.0038788 20591 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.252 25.589 29.923 19.751 68.81 28.418 46.19 68.77 28 19 66 28 47 65 1 1 3 1 2 2 20043 + 6509 3442 6265 15100;15101;15102 17439;17440;17441 17439 3 FPNQNQTK Unmodified 975.47739 0.47739386 1639 P56391 Cox6b1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 0 0 9 1.93 2 1 2 1 1 42.037 42.037 2;3 0.00072958 10229 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 149.65 66.389 518.49 700.12 938.7 710.97 919.81 809.21 489 691 926 709 925 779 3 6 6 6 6 5 223080 6510 1639 6266 15103;15104;15105;15106;15107;15108;15109 17442;17443;17444;17445;17446;17447;17448;17449 17445 8 FPPFFTLQPNVDTR Unmodified 1677.8515 0.85149185 422 A2A4K0;Q9CQ80;E9PXS9;A2A4J8 Vps25 Vacuolar protein-sorting-associated protein 25 yes no 0 0 0 0 11.5 0.5 1 1 86.206 86.206 3 0.00057441 27289 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.219 50.532 39.342 37 60.394 71.045 0 59.696 37 37 56 65 0 56 1 1 1 1 0 1 14422 6511 422 6267 15110;15111 17450;17451;17452;17453 17450 4 FPPGLEVAEQSSGELGPGNEPAAHSLWDLTPLSPAPLASR Unmodified 4094.0385 0.038523942 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7 0 1 91.645 91.645 4 0.0017257 33952 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 25.822 21.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1285.9 6512 510 6268 15112 17454 17454 1 FPQLDDTSFANSR Unmodified 1496.6896 0.68957148 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7 0 1 67.474 67.474 3 0.011882 22709 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.69 20.314 0 0 47.2 57.742 34.729 38.451 0 0 46 56 37 37 0 0 1 1 1 1 3508.6 6513 1412 6269 15113 17455 17455 1 FPQPLNMLEHLASK Unmodified 1623.8443 0.84429799 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 10.5 0.5 1 1 85.019 85.019 3 0.004312 26499 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.188 25.388 60.088 0 0 0 120.44 86.354 56 0 0 0 120 83 1 0 0 0 2 1 32201 6514 2408 6270 15114;15115 17456;17457 17457 2 FPSAFCGICGLKPTGNR Unmodified 1880.9026 0.90255792 1168 O08914 Faah Fatty-acid amide hydrolase 1 yes yes 0 0 0 1 6.5 5.5 1 1 68.744 68.744 3 4.8571E-05 17256 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.805 53.863 117.93 104.07 109.27 89.672 0 148.17 111 107 111 88 0 139 2 2 2 2 0 2 16083 6515 1168 6271 15116;15117 17458;17459 17459 2 FPSHFSSDLK Unmodified 1163.5611 0.56112349 1310;1793 P05132;P68181 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 8 0 1 55.443 55.443 3 1.2144E-05 16486 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.55 72.781 167.78 154.06 163.54 158.68 226.63 193.94 158 158 167 158 230 188 1 1 1 1 1 1 16455 6516 1310;1793 6272 15118 17460 17460 1 FPSLGPYNVSK Unmodified 1207.6237 0.62372375 2857 Q99LB2 Dhrs4 Dehydrogenase/reductase SDR family member 4 yes yes 0 0 0 0 10.5 0.5 1 1 69.181 69.181 3 0.00048532 20224 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.82 49.566 59.711 114.08 0 60.018 138.01 134.64 56 111 0 56 139 130 1 2 0 1 2 2 16808 6517 2857 6273 15119;15120 17461;17462 17461 2 FPTLGGR Unmodified 746.40752 0.40752338 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 10 0 1 53.96 53.96 2 0.027422 13343 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.401 62.336 78.748 0 109.97 0 121.58 114.86 74 0 102 0 120 111 1 0 1 0 1 1 17598 6518 1201 6274 15121 17463 17463 1 FPTLWSGAR Unmodified 1033.5345 0.53451481 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 11.5 0.5 1 1 69.706 69.706 2 0.00046372 19925 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 125.31 84.087 93.549 274.2 178.48 162.06 397.12 456.64 88 265 176 158 388 439 1 2 2 2 1 3 91077 6519 1873 6275 15122;15123 17464;17465;17466 17464 3 FPVIQHFK Unmodified 1014.5651 0.56508666 1654 P58389;A2AWE9;B7ZDE0;A2AWF0 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 11.5 0.5 1 1 59.925 59.925 3 0.00091042 14220 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.02 69.196 433.22 384.31 404.12 230.84 393.35 517.51 407 395 397 240 398 496 1 2 1 1 1 2 130070 6520 1654 6276 15124;15125 17467;17468;17469 17469 3 FPVTEAVNK Unmodified 1003.5338 0.53384611 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 58.9 58.9 2 0.022892 18103 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.463 21.476 59.654 44.329 35.42 37.121 64.298 57.861 56 46 37 37 65 56 1 1 1 1 1 1 3539 6521 3266 6277 15126 17470 17470 1 FPVVVHSVTPSLR Unmodified 1436.814 0.81398414 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 11 0 1 60.756 60.756 3 6.3386E-05 15999 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.537 52.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6522 240 6278 15127 17471 17471 1 FPYDSWGTPFQQLK Unmodified 1712.8199 0.81985737 1804 P70236;A2AGS2 Map2k6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 0 10 0 1 84.42 84.42 3 0.0017088 26879 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.947 26.612 0 48.944 0 40.441 0 0 0 46 0 37 0 0 0 1 0 1 0 0 3987 6523 1804 6279 15128 17472 17472 1 FPYLCGK Unmodified 883.42621 0.42620992 1496 P31648 Slc6a1 Sodium- and chloride-dependent GABA transporter 1 yes yes 0 0 0 0 10.5 0.5 1 1 65.108 65.108 2 0.027131 18226 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.26 59.324 169.24 134.55 115.82 416.61 727.73 179.09 159 139 120 400 709 168 1 1 1 2 1 1 74162 6524 1496 6280 15129;15130 17473;17474 17473 2 FPYLCQK Unmodified 954.46332 0.4633237 164 A0A0R4J087;Q8BJI1;A0A0R4J252;E9Q4S9;A0A1W2P744;Q8BG16 Slc6a17;Slc6a15 Sodium-dependent neutral amino acid transporter SLC6A17;Transporter;Sodium-dependent neutral amino acid transporter B(0)AT2 yes no 0 0 0 0 10.5 0.5 1 1 63.455 63.455 2 0.027374 17579 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.885 47.514 69.745 69 0 58.96 119.52 95.727 65 69 0 56 120 93 1 1 0 1 1 1 21470 6525 164 6281 15131;15132 17475;17476 17475 2 FPYLCYK Unmodified 989.46807 0.46807473 1497 P31650;A0A0U1RQA5;A0A0U1RP20;A0A0U1RQA0;D3YWZ5;E9PXG1;F6UKB4;G5E8Z4;E9Q151;Q8VCS9;P31649;P31651;O55192;Q61327;O35316;Q8VBW1 Slc6a11;Slc6a13;Slc6a12;Slc6a8;Slc6a2;Slc6a3;Slc6a6 Sodium- and chloride-dependent GABA transporter 3;Transporter;Sodium- and chloride-dependent GABA transporter 2;Sodium- and chloride-dependent betaine transporter;Sodium-dependent noradrenaline transporter;Sodium-dependent dopamine transporter;Sodium- and chloride-dependent taurine transporter;Sodium- and chloride-dependent creatine transporter 1 yes no 0 0 0 0 12 0.816 1 1 1 69.689 69.689 2;3 0.023484 19913 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.837 42.566 228.59 77.831 107.43 107.12 289.61 134.58 214 83 102 102 286 134 3 2 1 1 2 2 47896 6526 1497 6282 15133;15134;15135 17477;17478;17479 17477 3 FQAIAPLAVPR Unmodified 1181.6921 0.69207809 1215 O35954 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 70.306 70.306 2;3 0.00054899 20737 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.598 44.239 0 0 85.132 134.46 135.89 96.893 0 0 83 130 139 93 0 0 1 2 2 1 15516 6527 1215 6283 15136;15137 17480;17481 17480 2 FQCIVFLNIPR Unmodified 1405.754 0.75402642 707 S4R2G0;D3Z519;D3Z2W1;D3YWQ0 Dgki Diacylglycerol kinase yes no 0 0 0 0 12 0 1 84.42 84.42 3 0.0060514 23474 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.391 26.732 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 2840.5 6528 707 6284 15138 17482 17482 1 FQCSLQNK Unmodified 1023.4808 0.48076468 3283 Q9QYS2 Grm3 Metabotropic glutamate receptor 3 yes yes 0 0 0 0 8 0 1 49.583 49.583 3 0.064736 13698 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.352 9.7815 69.011 83.849 52.242 66.71 64.926 0 65 84 56 65 65 0 1 1 1 1 1 0 1798.3 6529 3283 6285 15139 17483 17483 1 FQDDDQTR Unmodified 1023.4258 0.42575222 930 E9Q8B3;Q5U458 Dnajc11 DnaJ homolog subfamily C member 11 yes no 0 0 0 0 3 0 1 34.646 34.646 2 0.0019852 9495 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.31 91.892 29.724 17.563 38.83 0 0 0 28 19 37 0 0 0 1 1 1 0 0 0 2815.2 6530 930 6286 15140 17484 17484 1 FQDDLDVR Unmodified 1006.472 0.47197413 2087 Q60790 Rasa3 Ras GTPase-activating protein 3 yes yes 0 0 0 0 4 0 1 55.039 55.039 2 0.049012 18711 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.04 28.16 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1757.9 6531 2087 6287 15141 17485 17485 1 FQDDPDGLHQLDGTPLTAEDIVHK Unmodified 2660.2718 0.27182435 1569 P47867 Scg3 Secretogranin-3 yes yes 0 0 0 0 4 0 1 69.922 69.922 4 0.0018113 25319 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.626 25.013 20.387 0 0 30.604 55 29.848 19 0 0 28 55 28 1 0 0 1 1 1 3380.4 6532 1569 6288 15142 17486;17487 17486 2 FQDEEEVFEWNNEVK Unmodified 1940.8428 0.84283724 3122 Q9DBF1;G3UYR8 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 4.5 0.5 1 1 77.118 77.118 4 0.026811 28804 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.022 18.105 19 20.073 8.5336 0 19.874 0 19 19 9 0 19 0 1 1 1 0 1 0 3778.1 6533 3122 6289 15143;15144 17488;17489 17489 2 FQDEITYGLK Unmodified 1212.6027 0.60265396 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 6 0 1 68.981 68.981 3 0.0016931 24298 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.536 28.534 39.418 0 47.497 46.601 44.994 28.564 37 0 46 46 46 28 1 0 1 1 1 1 2906.8 6534 1275 6290 15145 17490 17490 1 FQDLISTIK Unmodified 1063.5914 0.59136099 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 9.5 0.5 1 1 78.69 78.69 2;3 0.0058245 24399 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.261 24.402 139.21 55.551 0 169.85 151.17 183.3 130 56 0 158 158 176 2 1 0 2 2 2 14516 6535 965 6291 15146;15147 17491;17492 17492 2 FQDNFEFIQWFK Unmodified 1647.7722 0.7721789 2243 Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 96.528 96.528 3 1.4558E-08 34557 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.5 93.44 114.18 113.32 27.695 245.1 188.78 200.21 107 112 28 229 190 191 3 3 1 6 4 4 42578 6536 2243 6292 15148;15149;15150;15151;15152 17493;17494;17495;17496;17497;17498;17499 17494 7 FQDNFEFVQWFK Unmodified 1633.7565 0.75652884 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 10.3 1.89 2 1 93.651 93.651 2;3 1.4688E-06 33475 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.05 56.184 0 0 40.034 0 0 59.696 0 0 37 0 0 56 0 0 1 0 0 1 12284 6537 2115 6293 15153;15154;15155 17500;17501;17502 17501 3 FQDNLDFIQWFK Unmodified 1599.7722 0.7721789 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 10 1.87 1 1 1 1 97.25 97.25 3 6.2865E-07 31776 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.01 78.038 39.701 62.299 28.537 30.604 37.714 44.762 37 59 28 28 37 43 1 3 1 1 1 2 26404 6538 722 6294 15156;15157;15158;15159 17503;17504;17505;17506;17507 17506 5 FQDVLMSLAK Unmodified 1150.6056 0.60563084 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 11.3 1.25 1 1 1 86.105 86.105 3 0.0018785 27625 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.153 26.564 0 19.892 47.365 39.214 65.228 27.987 0 19 47 37 65 28 0 1 2 1 1 1 6890.1 6539 287 6295 15160;15161;15162 17508;17509;17510 17508 3 FQEDIISIWNK Unmodified 1391.7085 0.70851601 688 D3Z730;Q3UUT0;G3X9H1;D3Z729;Q0P688;D3YUV9;Q8BMB3 Eif4e2 Eukaryotic translation initiation factor 4E type 2 yes no 0 0 0 0 8 0 1 84.995 84.995 3 0.020708 30421 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.897 30.941 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1139.7 6540 688 6296 15163 17511 17511 1 FQEGQEEER Unmodified 1150.4891 0.48908076 2397 Q8BH61 F13a1 Coagulation factor XIII A chain yes yes 0 0 0 0 1 0 1 35.027 35.027 2 0.0021401 9031 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.342 65.268 9.612 8.9279 0 0 38.702 0 9 9 0 0 37 0 1 1 0 0 1 0 2326.4 6541 2397 6297 15164 17512 17512 1 FQEHIIQAPKPVEAIK Unmodified 1847.0305 0.030518853 3045 Q9D1P4;A0A1L1STQ1;A0A1L1SSG7;A0A1L1STZ1;A0A1L1SU22 Chordc1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 1 7 0 1 61.068 61.068 4 0.0010723 19764 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.278 44.964 109.03 0 69.78 0 103.76 85.517 102 0 65 0 102 83 1 0 1 0 1 1 5845.9 6542 3045 6298 15165 17513 17513 1 FQEHLQLQNLGINPANIGFSTLTMESDK Unmodified 3144.555 0.55499884 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.5 0.5 1 1 86.965 86.965 3;4 6.0083E-18 30497 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.228 59.795 49.026 65.854 0 39.196 66.189 0 46 65 0 37 65 0 1 1 0 1 1 0 9101.3 6543 2185 6299 15166;15167 17514;17515 17515 2 FQELNVQAPR Unmodified 1200.6251 0.62512073 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 56.598 56.598 2 4.3416E-05 17676 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.31 83.761 172.55 92.634 195.46 153.23 124.85 83.331 162 97 191 153 125 79 3 2 3 4 2 2 28999 6544 3210 6300 15168;15169;15170;15171 17516;17517;17518;17519 17517 4 FQESEERPK Unmodified 1148.5462 0.54620171 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 7.33 4.03 1 1 1 37.269 37.269 3 5.6771E-08 9674 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 131.09 89.547 336.72 284.29 221.01 402.46 449.57 381.59 316 292 228 388 460 370 1 2 1 2 2 2 33580 6545 1957 6301 15172;15173;15174 17520;17521;17522 17522 3 FQEYHIQQNEALAAK Unmodified 1788.8795 0.87949752 3347 Q9WV98 Timm9 Mitochondrial import inner membrane translocase subunit Tim9 yes yes 0 0 0 0 6 0.816 1 1 1 55.636 55.636 3;4 3.6407E-05 17090 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.354 51.515 178.57 63.828 49.622 142.09 0 119.39 167 65 46 130 0 112 3 1 1 2 0 2 17877 6546 3347 6302 15175;15176;15177 17523;17524;17525 17525 3 FQFLYDVQLPIVEK Unmodified 1737.9342 0.93415885 2023 Q3V3R1 Mthfd1l Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 0 10 0 1 95.808 95.808 3 0.0017037 31307 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.995 36.506 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 3131.6 6547 2023 6303 15178 17526 17526 1 FQGPDNGQGPK Unmodified 1143.5309 0.530886 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 6 0 1 46.422 46.422 3 0.013588 13658 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.004 11.67 49.026 65.854 0 59.804 74.657 0 46 65 0 56 74 0 1 1 0 1 1 0 3546.9 6548 2525 6304 15179 17527 17527 1 FQIATVTEK Unmodified 1035.5601 0.56006086 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 8.5 0.5 1 1 62.33 62.33 2;3 0.00032303 19652 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.27 64.784 128.36 157.17 73.443 144.06 185.62 37.059 120 157 74 139 185 37 1 2 1 2 2 1 21204 6549 1864 6305 15180;15181 17528;17529 17528 2 FQILEGPPESMGR Unmodified 1459.7129 0.71294946 1595 P50396;D6RI86 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 8.5 2.69 1 1 1 1 70.277 70.277 3 8.6926E-06 25962 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105 83.538 110.18 94.47 27.08 38.675 142.34 57.524 103 93 28 38 139 56 3 2 1 2 3 2 62907 6550 1595 6306 15182;15183;15184;15185 17530;17531;17532;17533 17533 4 FQILNDEIITILDK Unmodified 1673.924 0.9239881 2282 Q7TMB8;A0A0R4J119 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 7 0 1 102.09 102.09 3 0.005143 36894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.112 29.747 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 743.59 6551 2282 6307 15186 17534 17534 1 FQIMSDQIIGR Unmodified 1306.6704 0.67035637 2948 Q9CQZ1 Hsbp1 Heat shock factor-binding protein 1 yes yes 0 0 0 0 9 0.816 1 1 1 71.54 71.54 2;3 0.00085613 24013 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.913 53.722 148.55 25.849 78.12 61.208 67.99 118.33 139 28 74 56 65 111 3 1 2 1 2 1 14864 6552 2948 6308 15187;15188;15189 17535;17536;17537 17535 3 FQIPAQR Unmodified 858.47119 0.47118627 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 8 0 1 50.621 50.621 2 0.01493 14193 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.89 52.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6553 2582 6309 15190 17538 17538 1 FQIQDISVETEDNK Unmodified 1664.7893 0.78934511 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 5 0 2 69.507 69.507 2;3 8.7081E-05 25099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.287 62.484 39.218 56.381 33.415 68.207 44.983 0 37 56 37 65 46 0 1 1 1 1 1 0 10267 6554 2186;2148 6310 15191;15192 17539;17540 17539 2 FQIQDISVETEDNKEK Unmodified 1921.9269 0.92690122 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 7.2 2.99 2 1 1 1 63.934 63.934 3;4 5.6282E-06 22555 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.16 67.579 348.57 353.81 469.91 302.56 339.62 358.87 328 362 468 300 342 343 4 5 5 4 4 4 39159 6555 2186;2148 6311 15193;15194;15195;15196;15197 17541;17542;17543;17544;17545 17542 5 FQIYFDNCPLLTIPGR Unmodified 1952.9819 0.9818541 1185 O35286;A0A0G2JG10;Q497W9;A0A0G2JGQ5 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 11 0 1 91.464 91.464 3 0.024374 29349 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.757 15.918 0 0 30.296 0 19.197 19.706 0 0 28 0 19 19 0 0 1 0 1 1 2130.7 6556 1185 6312 15198 17546 17546 1 FQLIEVLMSSR Unmodified 1321.7064 0.70640752 2220 Q6P5E8 Dgkq Diacylglycerol kinase theta yes yes 0 0 0 0 12 0 1 93.81 93.81 2 0.018635 27005 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.754 11.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6557 2220 6313 15199 17547 17547 1 FQLTDSQIYEVLSVIR Unmodified 1910.0149 0.014928368 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 9.56 1.57 1 3 7 3 2 2 99.531 99.531 2;3 1.601E-78 40015 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 207.55 169.36 155.24 158.35 188.2 186.59 119.39 149.89 147 157 184 178 119 141 7 9 7 6 5 7 478840 6558 1158 6314 15200;15201;15202;15203;15204;15205;15206;15207;15208;15209;15210;15211;15212;15213;15214;15215;15216;15217 17548;17549;17550;17551;17552;17553;17554;17555;17556;17557;17558;17559;17560;17561;17562;17563;17564;17565;17566;17567;17568;17569;17570;17571 17569 24 FQLTFPLR Unmodified 1020.5757 0.57565135 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 8 4.97 1 1 1 77.314 77.314 2 0.0068498 20857 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.01 60.172 225.8 226.03 271.09 191.16 309.25 464.86 213 231 272 195 309 462 2 2 2 2 2 2 97812 6559 2160 6315 15218;15219;15220 17572;17573;17574;17575 17575 4 FQLYNWLEK Unmodified 1239.6288 0.62880913 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11.2 1.17 2 1 1 1 84.446 84.446 2;3 0.0011561 26923 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.4 62.15 109.26 124.2 73.677 210.75 188.85 49.036 102 121 74 204 186 46 2 3 1 4 2 1 34427 6560 570 6316 15221;15222;15223;15224;15225 17576;17577;17578;17579;17580 17577 5 FQMFNELTDSK Deamidation (N) 1359.6017 0.60166768 3432 yes yes 0 1 0 0 3 0 1 67.023 67.023 3 0.034222 24431 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.5 26.583 59.089 103.2 80.365 66.255 0 88.478 56 102 83 65 0 83 1 1 1 1 0 1 16688 + 6561 3432 6317 15226 17581 17581 1153 1 FQMPDQGMTSADDFFQGTK Unmodified 2149.9085 0.90849074 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7.86 2.23 2 2 2 1 80.814 80.814 3;4 4.9168E-10 28410 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.33 91.735 275.27 191.57 569.22 493.63 429.24 560.19 259 194 556 491 445 537 4 3 6 6 4 4 151290 6562 1158 6318 15227;15228;15229;15230;15231;15232;15233 17582;17583;17584;17585;17586;17587;17588 17587 7 FQMPDQGMTSADDFFQGTK Oxidation (M) 2165.9034 0.90340536 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 0 6.5 0.5 1 1 75.636 75.636 3 1.7668E-05 27436 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.636 52.176 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6563 1158 6318 15234;15235 17589;17590 17589 54 2 FQNALLVR Unmodified 959.55525 0.55525025 655 CON__P02768-1 yes yes 0 0 0 0 10 0 1 60.587 60.587 2 0.052411 16322 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.659 39.135 0 64.879 256.11 65.618 0 168.43 0 65 243 74 0 158 0 1 1 1 0 1 12826 + 6564 655 6319 15236 17591 17591 1 FQNPQAEGVNAVEDEIKK Unmodified 2014.996 0.99598384 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 1 5.5 0.5 1 1 64.5 64.5 3 1.7779E-07 22784 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.16 81.284 108.33 35.102 158.57 0 93.269 116.73 102 37 149 0 93 112 2 1 2 0 2 2 11784 6565 1983 6320 15237;15238 17592;17593 17592 2 FQNVNSVTLFVQSNQGEEETTR Unmodified 2526.1987 0.19865941 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 7 0 1 72.295 72.295 3 2.5331E-18 24973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.85 101.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2990.9 6566 2525 6321 15239 17594 17594 1 FQPPEAPASWPGVR Unmodified 1537.7678 0.76776222 2191 Q69ZK9;F6VE93 Nlgn2 Neuroligin-2 yes no 0 0 0 0 8 0 1 68.394 68.394 3 0.062079 22594 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.827 8.9484 29.807 46.934 0 30.604 0 0 28 46 0 28 0 0 1 1 0 1 0 0 2311.9 6567 2191 6322 15240 17595 17595 1 FQQIPASDTK Unmodified 1133.5717 0.57168818 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 7 0 1 52.056 52.056 2 0.0010218 15506 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.111 61.175 30.044 0 0 30.453 8.0151 0 28 0 0 28 9 0 1 0 0 1 1 0 2229.3 6568 1854 6323 15241 17596 17596 1 FQQISSVR Unmodified 963.51378 0.51377937 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 0 0 0 0 10 2.16 1 1 1 47.817 47.817 2 0.0068498 12131 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.01 71.514 192.02 119.04 86.87 210.61 91.634 204.19 180 120 83 199 93 194 3 2 1 3 1 3 28699 6569 2638 6324 15242;15243;15244 17597;17598;17599 17598 3 FQQQLEQLNAMGFLNR Unmodified 1935.9625 0.96251564 3295 Q9QZM0 Ubqln2 Ubiquilin-2 yes yes 0 0 0 0 9 0 1 84.979 84.979 3 0.00038022 29533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.631 47.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5743.5 6570 3295 6325 15245 17600 17600 1 FQQTSFYGR Unmodified 1132.5302 0.53015772 2450 Q925N0;Q8BRQ9;D3YXH5 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 9 0 1 52.231 52.231 2 0.0017824 14153 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.055 69.156 0 0 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 0 13290 6571 2450 6326 15246 17601 17601 1 FQSAAIGALQEASEAYLVGLFEDTNLCAIHAK Unmodified 3436.6973 0.69730598 1300 P84244;P02301;E0CZ27 H3f3a;H3f3c Histone H3.3;Histone H3.3C;Histone H3 yes no 0 0 0 0 9.57 1.84 1 1 2 1 1 1 108.08 108.08 4;5 1.0388E-27 36802 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.93 65.768 42.76 26.528 19.867 44.159 31.364 35.687 40 26 19 41 33 34 4 4 2 3 4 3 34262 6572 1300 6327 15247;15248;15249;15250;15251;15252;15253 17602;17603;17604;17605;17606;17607;17608;17609;17610 17603 9 FQSISTEFLALMK Unmodified 1513.7851 0.78505177 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11.3 1.25 1 1 1 95.952 95.952 3 5.9138E-06 31349 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.65 80.435 129.65 35.328 56 50.278 0 39.442 121 37 56 46 0 37 2 1 1 1 0 1 15231 6573 3204 6328 15254;15255;15256 17611;17612;17613 17611 3 FQSLGVAFYR Unmodified 1186.6135 0.61349341 1600 P51150;A0A0N4SVG9;A0A0N4SVR6 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 12 0.816 1 1 1 71.516 71.516 2 4.6955E-05 18368 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 115.42 68.993 376.55 89.04 117.15 341.77 286.1 163.47 352 93 120 324 289 158 3 1 1 3 2 1 99907 6574 1600 6329 15257;15258;15259 17614;17615;17616 17615 3 FQSVGVQVEEEK Unmodified 1377.6776 0.67760981 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 6 0 1 59.58 59.58 3 0.0027917 19953 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.754 28.317 39.342 0 60.394 0 58.576 0 37 0 56 0 56 0 1 0 1 0 1 0 3692.5 6575 784 6330 15260 17617 17617 1 FQSVPAQPGQTSPLLQYFGILLDQGQLNK Unmodified 3186.6713 0.67134923 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 11.7 1.11 1 2 1 2 106.1 106.1 3;4;5 4.7651E-26 29307 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.216 67.075 126.98 88.176 117.64 326.19 33.25 383.88 121 91 113 302 34 361 4 4 3 6 1 6 240450 6576 2185 6331 15261;15262;15263;15264;15265;15266 17618;17619;17620;17621;17622;17623;17624;17625;17626;17627;17628 17624 11 FQTVHFFR Unmodified 1080.5505 0.55049923 2899 Q9CPV4;E9Q197;E9Q055;E9Q2R6 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 11 0.816 1 1 1 57.283 57.283 3 0.0015881 14827 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.74 71.269 138.2 400.81 200.02 35.474 55.317 195.63 130 404 195 37 56 185 1 3 2 1 1 2 53115 6577 2899 6332 15267;15268;15269 17629;17630;17631 17629 3 FQVIAIEGLDATGK Unmodified 1460.7875 0.78749461 1962 Q3U5Q7 Cmpk2 UMP-CMP kinase 2, mitochondrial yes yes 0 0 0 0 8 0 1 81.844 81.844 3 0.025278 28966 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.005 17.246 0 38.937 25.789 48.741 0 59.696 0 37 28 46 0 56 0 1 1 1 0 1 3319.1 6578 1962 6333 15270 17632 17632 1 FQVSAATESR Unmodified 1094.5356 0.53563702 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6.5 0.5 1 1 45.599 45.599 2 1.4278E-05 13314 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.88 67.163 59.394 111.65 146.41 221.22 152.46 251.49 56 111 148 213 157 240 1 2 2 3 2 3 8207.6 6579 3449;3451 6334 15271;15272 17633;17634;17635 17633 3 FQVYYLGNVPVAK Deamidation (N) 1497.7868 0.78676633 222 A0A0R4J2C6;A0A0R4J2C1;Q9QXJ1;A0A087WR62;A0A087WPS7;A0A087WPI2;A0A1B0GT76;A0A087WQC5 Apbb1 Amyloid beta A4 precursor protein-binding family B member 1 yes no 0 1 0 0 10 0 1 77.415 77.415 3 0.0023606 23792 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.924 50.297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6580 222 6335 15273 17636 17636 75 1 FQYLLNPR Unmodified 1049.5658 0.56581494 2200 Q6NS52 Dgkb Diacylglycerol kinase beta yes yes 0 0 0 0 8 4.97 1 1 1 67.552 67.552 2 0.011234 16785 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.262 0 168.15 28.427 208.35 42.412 94.323 29.31 158 28 195 46 93 28 3 1 2 1 2 1 24474 6581 2200 6336 15274;15275;15276 17637;17638;17639 17639 3 FREFLETQDDYEPSWSLQDK Unmodified 2532.1445 0.14449857 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 1 13 0 1 76.689 76.689 4 0.0052937 29297 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.257 24.541 60.088 0 0 59.627 84.079 0 56 0 0 56 83 0 1 0 0 1 1 0 5138 6582 3453 6337 15277 17640 17640 1 FRHENIIGINDIIR Unmodified 1708.9373 0.93728717 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 1 9.67 2.36 2 1 61.285 61.285 3;4 1.5946E-11 20877 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.02 101.96 113.64 38.006 165.07 30.604 122.95 105.22 107 37 153 28 121 102 3 1 2 1 2 2 20994 6583 1769 6338 15278;15279;15280 17641;17642;17643 17643 3 FRPLNEAEILR Unmodified 1356.7514 0.75138388 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 1 8 0 1 58.251 58.251 3 0.0016947 17835 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.387 3.4355 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 5011.7 6584 1481 6339 15281 17644 17644 1 FRPPLLEMLAR Unmodified 1341.7591 0.75911179 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 1 4.67 5.19 2 1 79.159 79.159 3 2.0841E-05 26075 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.93 53.489 78.806 96.824 84.58 116.53 110.13 110.39 74 97 84 112 112 106 1 3 2 3 2 3 21750 6585 2790 6340 15282;15283;15284 17645;17646;17647;17648 17646 4 FRPSFPASSPYVTTVGGTSFK Unmodified 2232.1215 0.1215187 1288 O89023 Tpp1 Tripeptidyl-peptidase 1 yes yes 0 0 0 1 10 0 1 68.426 68.426 3 5.5757E-13 19813 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.85 79.168 49.358 0 0 61.208 0 49.036 46 0 0 56 0 46 1 0 0 1 0 1 10170 6586 1288 6341 15285 17649 17649 1 FRPSIAYFPQIVSVAAR Unmodified 1921.0574 0.057402305 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 1 6.5 5.5 1 1 76.119 76.119 3 6.6316E-06 26492 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.643 68.929 20.212 0 29.347 19.018 0 0 19 0 28 19 0 0 1 0 1 1 0 0 22229 6587 1840 6342 15286;15287 17650;17651 17650 2 FRPTLVFR Unmodified 1034.6025 0.6025348 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 1 1 0 1 56.991 56.991 3 0.0064263 18172 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.635 65.701 538.42 396.23 603.64 501.07 851.22 493.79 507 416 603 506 852 486 2 2 2 2 2 2 132570 6588 1702 6343 15288 17652;17653 17652 2 FSADAFADQLYQYVTK Unmodified 1865.8836 0.88357984 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 0 9.5 0.5 1 1 95.06 95.06 3 0.0006775 34079 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.565 34.732 22.533 0 0 29.902 56.156 0 21 0 0 28 55 0 2 0 0 1 2 0 6957.6 6589 3121 6344 15289;15290 17654;17655 17654 2 FSALGFGAR Unmodified 924.48175 0.48175096 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 0 11 0 1 64.373 64.373 2 0.032766 17442 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.597 34.653 93 0 0 0 0 0 93 0 0 0 0 0 1 0 0 0 0 0 18207 6590 1896 6345 15291 17656 17656 1 FSAQLEK Unmodified 821.42832 0.42831841 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 9.25 2.28 1 1 1 1 53.71 53.71 2 0.027114 14901 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.069 42.565 1036 489.86 568.71 506.61 673.76 914.59 971 511 547 475 691 876 4 2 2 2 3 3 94338 6591 2555 6346 15292;15293;15294;15295 17657;17658;17659;17660 17659 4 FSASSGGGGSR Unmodified 968.43117 0.43117195 1022 F7CBP1;G3XA17;Q62448;F6TW20;F7CHS2;F7DAB1 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 7 0 1 31.06 31.06 2 0.0024487 5811 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.986 51.767 20.27 23.105 0 0 0 0 19 23 0 0 0 0 1 1 0 0 0 0 1482 6592 1022 6347 15296 17661 17661 1 FSATEVTNK Unmodified 995.49238 0.49237523 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 7 0 1 51.715 51.715 2 0.018341 15330 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.485 28.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6593 2701 6348 15297 17662 17662 1 FSAVALCK Unmodified 894.46332 0.4633237 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 9.22 4.52 2 2 1 2 2 61.382 61.382 2;3 0.0039339 16629 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.65 68.957 1456.9 1413.1 2169.9 1869.5 1415 1717.9 1370 1430 2151 1833 1411 1642 7 6 9 9 6 7 785910 6594 3302 6349 15298;15299;15300;15301;15302;15303;15304;15305;15306 17663;17664;17665;17666;17667;17668;17669;17670;17671;17672;17673;17674 17665 12 FSDEGGYTCFFR Unmodified 1484.6031 0.60306466 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 6.5 0.5 1 1 71.81 71.81 2 2.2235E-14 24783 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.28 111.68 148.03 125.91 81.631 133.97 173.31 134.92 139 129 83 130 176 130 2 2 1 2 2 1 34145 6595 2014 6350 15307;15308 17675;17676 17676 2 FSDFLGLYEK Unmodified 1217.5968 0.5968403 2207 Q9WV80;Q6NZD2;D3YWH1 Snx1 Sorting nexin-1 yes no 0 0 0 0 8.5 0.5 1 1 84.826 84.826 3 0.013397 30352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.292 31.195 0 19.773 26.491 58.775 73.416 0 0 19 28 56 74 0 0 1 1 1 2 0 5875.9 6596 2207 6351 15309;15310 17677;17678 17677 2 FSDIYALCVAYPEPLGER Unmodified 2099.0034 0.0033774035 3064 Q9D4H8;E0CYT5;H7BX52 Cul2 Cullin-2 yes no 0 0 0 0 7 0 1 85.918 85.918 3 0.0012352 31448 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.131 31.437 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1351.5 6597 3064 6352 15311 17679 17679 1 FSDQFPLPLK Unmodified 1190.6336 0.63356015 2365 Q8BFY9 Tnpo1 Transportin-1 yes yes 0 0 0 0 9 0 1 79.388 79.388 3 0.0060864 27073 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.783 20.823 30.006 7.5527 0 30.604 0 0 28 9 0 28 0 0 1 1 0 1 0 0 2471.8 6598 2365 6353 15312 17680 17680 1 FSDVILATILATK Unmodified 1390.8072 0.80716742 560 A7M7S2;Q8VIJ8 Nprl3 Nitrogen permease regulator 3-like protein yes no 0 0 0 0 12 0 1 102.36 102.36 3 0.00027307 28845 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.345 45.358 0 11.553 9.0449 0 9.0934 9.3345 0 11 9 0 9 9 0 1 1 0 1 1 755.05 6599 560 6354 15313 17681 17681 1 FSDYVEVADAQDYDR Unmodified 1791.7588 0.75877326 1907 Q2M3X8;B1B1B8 Phactr1 Phosphatase and actin regulator 1;Phosphatase and actin regulator yes no 0 0 0 0 3.5 0.5 1 1 68.31 68.31 2;3 0.02323 25129 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.915 29.662 9.657 0 0 50.148 65.009 19.733 9 0 0 47 65 19 1 0 0 2 2 1 4652 6600 1907 6355 15314;15315 17682;17683 17682 2 FSEDADR Unmodified 838.34571 0.34571099 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 3 0 1 35.715 35.715 2 0.035058 10012 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.241 41.668 0 0 0 39.57 46.298 0 0 0 0 37 46 0 0 0 0 1 1 0 7458.8 6601 63 6356 15316 17684 17684 1 FSEDDPEYLR Unmodified 1269.5513 0.55134667 3275 Q9QYB8;A0A0N4SWF0 Add2 Beta-adducin yes no 0 0 0 0 3 0.816 1 1 1 56.82 56.82 2 2.7856E-08 19272 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 143.37 109.58 247.3 201.31 104.52 178.87 183.97 175.28 232 204 106 171 181 167 5 4 2 3 3 3 83196 6602 3275 6357 15317;15318;15319 17685;17686;17687;17688;17689 17685 5 FSEEFVETR Unmodified 1142.5244 0.52440364 2527 Q8CE50 Snx30 Sorting nexin-30 yes yes 0 0 0 0 4 0 1 57.873 57.873 2 0.048566 19952 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.258 31.739 0 29.792 0 50.278 0 29.848 0 28 0 46 0 28 0 1 0 1 0 1 5232.8 6603 2527 6358 15320 17690 17690 1 FSEFSSWVSAK Unmodified 1273.5979 0.59790293 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 9 0 1 77.831 77.831 3 0.05564 26341 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.847 6.5157 39.564 27.124 0 0 57.53 0 37 28 0 0 55 0 1 1 0 0 1 0 2845.6 6604 305 6359 15321 17691 17691 1 FSEGTSADR Unmodified 968.41994 0.41993856 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 4.5 0.5 1 1 35.09 35.09 2 0.0014401 9223 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.07 56.349 20.292 18.848 0 49.416 45.846 0 19 19 0 46 46 0 1 1 0 1 1 0 8399.4 6605 1726 6360 15322;15323 17692;17693 17692 2 FSEHFSIHCCPPFTFLNSK Unmodified 2354.0612 0.061243408 3051 Q9D2P8 Mobp Myelin-associated oligodendrocyte basic protein yes yes 0 0 0 0 10.5 0.5 1 1 71.41 71.41 4 3.5021E-05 20635 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.424 39.403 138.15 197.18 58.683 114.85 319.54 227.53 130 195 65 111 318 222 2 2 1 1 2 2 30048 6606 3051 6361 15324;15325 17694;17695 17695 2 FSELTSEK Unmodified 939.45493 0.45492709 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 7.75 3.11 1 1 1 1 56.422 56.422 2;3 0.013544 17345 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.436 29.866 29.687 27.172 36.989 28.399 0 0 28 28 37 28 0 0 1 1 1 1 0 0 1849.1 6607 1825 6362 15326;15327;15328;15329 17696;17697;17698;17699 17698 4 FSEPHAR Unmodified 842.4035 0.40350064 1310;1793 P05132;P68181;H6TMF5;A0A0G2JFT9 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 9 4 1 1 29.92 29.92 3 0.0063853 6427 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.244 56.137 20.387 0 0 118.52 149.11 37.859 19 0 0 111 149 37 1 0 0 2 2 1 8924 6608 1310;1793 6363 15330;15331 17700;17701 17700 2 FSEQGLLK Unmodified 920.49673 0.49673232 644 B9EKR1;A0A0J9YVD2 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta yes no 0 0 0 0 7.5 0.5 1 1 61.712 61.712 2 0.010729 20101 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.311 40.22 205.85 199.5 219.73 167.67 93.924 108.73 194 204 222 167 93 102 2 2 2 2 1 1 20986 6609 644 6364 15332;15333 17702;17703 17702 2 FSEVLKR Unmodified 877.50215 0.50215205 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 10 1.87 1 1 1 1 49.385 49.385 3 0.012907 11581 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.75 45.968 2308.2 1770.3 1904.5 2448.1 2226.8 2521.5 2170 1840 1910 2382 2290 2425 5 5 4 5 4 5 953250 6610 1883 6365 15334;15335;15336;15337 17704;17705;17706;17707;17708 17707 5 FSFTLPYPVK Unmodified 1197.6434 0.64339656 2598 Q8K2C9 Hacd3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 yes yes 0 0 0 0 11.5 0.5 1 1 82.814 82.814 3 0.0023973 25904 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.283 39.678 29.952 18.196 0 0 0 66.848 28 19 0 0 0 65 1 1 0 0 0 2 11361 6611 2598 6366 15338;15339 17709;17710 17709 2 FSGDVVLAAR Unmodified 1033.5556 0.55564418 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 10.5 2.5 1 1 58.851 58.851 2 0.01016 20459 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.299 30.861 0 167.16 57.074 108.55 222.05 181.28 0 158 56 102 223 176 0 2 1 1 2 2 15603 6612 1582 6367 15340;15341 17711;17712 17712 2 FSGGYPALMDCMNK Unmodified 1589.6677 0.66765553 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 0 9 0 1 72.597 72.597 3 0.0012698 23846 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.071 45.516 0 0 129.84 0 77.404 0 0 0 120 0 74 0 0 0 1 0 1 0 4519.7 6613 1237 6368 15342 17713 17713 1 FSGWYDADLSPAGHEEAK Unmodified 1978.8697 0.86972069 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 6.4 1.02 1 2 1 1 65.803 65.803 3;4 1.2145E-07 22704 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.92 77.13 303.56 371.28 423.99 483 463.41 540.84 287 371 427 473 482 519 6 5 5 6 6 5 96709 6614 3126 6369 15343;15344;15345;15346;15347 17714;17715;17716;17717;17718;17719 17716 6 FSGWYDADLSPAGHEEAKR Unmodified 2134.9708 0.97083172 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 1 7 0.816 1 1 1 59.303 59.303 4 7.3638E-08 19808 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.085 73.617 275.26 193.81 470.68 168.97 358.58 416.43 259 204 454 167 361 398 3 3 4 2 3 3 41246 6615 3126 6370 15348;15349;15350 17720;17721;17722;17723 17720 4 FSHILQK Unmodified 871.49159 0.49158736 1085 G3X9K3;D3YYK9;A2A5R2;F6YCJ0 Arfgef1;Arfgef2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes no 0 0 0 0 10 0 1 51.454 51.454 3 0.028881 12214 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.687 7.7209 87.819 80.039 140.63 101.46 87.284 155.28 83 83 139 102 93 148 1 1 1 1 1 1 8066.1 6616 1085 6371 15351 17724 17724 1 FSILPAVFHPGNQK Unmodified 1553.8354 0.83544786 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 6.5 5.5 1 1 72.749 72.749 3 9.0376E-12 18707 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.28 86.955 92.656 48.944 116.75 115.01 81.806 169.29 87 46 111 113 85 161 1 1 1 2 1 2 25185 6617 568 6372 15352;15353 17725;17726 17726 2 FSLAATR Unmodified 764.41809 0.41808807 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 0 10 0 1 50.405 50.405 2 0.026927 11831 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.046 50.21 230.16 222.68 262.59 215.86 301.41 254.7 217 228 265 217 306 247 1 1 1 1 1 1 17414 6618 3232 6373 15354 17727 17727 1 FSLDALSLR Unmodified 1020.5604 0.56039521 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 9 0 1 76.132 76.132 2 0.020442 25416 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.654 22.463 48.828 65.304 33.719 48.268 0 0 46 65 37 46 0 0 1 1 1 1 0 0 24589 6619 2646 6374 15355 17728 17728 1 FSLFTAIHK Unmodified 1062.5862 0.58621603 2853 Q99L27;A0A2I3BRT9;A0A2I3BQX8 Gmpr2 GMP reductase 2 yes no 0 0 0 0 6.5 5.5 1 1 70.237 70.237 3 0.001739 17701 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.827 41.531 20.295 69.16 15.454 74.973 90.848 86.952 19 65 15 71 93 84 1 1 1 2 2 2 10553 6620 2853 6375 15356;15357 17729;17730 17730 2 FSLIDLAGNER Unmodified 1233.6354 0.63535107 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 8 0 1 75.65 75.65 2 0.025498 25982 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.903 25.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6621 810 6376 15358 17731 17731 1 FSLLVDSQLDSPK Unmodified 1447.7559 0.75586013 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9 0 1 78.697 78.697 3 0.00058156 26802 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.004 38.035 0 59.584 0 71.045 0 59.696 0 56 0 65 0 56 0 1 0 1 0 1 8741.4 6622 1226 6377 15359 17732 17732 1 FSLNLGGIADAPK Unmodified 1301.698 0.69795133 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 9.5 0.5 1 1 76.968 76.968 2;3 0.00037748 25869 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.623 63.456 29.807 0 39.884 9 48.116 0 28 0 37 9 46 0 1 0 1 1 1 0 7418.4 6623 3285 6378 15360;15361 17733;17734 17733 2 FSLYFLAYEDK Unmodified 1394.6758 0.6758189 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 10 0 1 88.209 88.209 2 0.0070344 28554 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.303 35.788 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 1057.8 6624 2897 6379 15362 17735 17735 1 FSLYFLAYEDKNDIPK Unmodified 1961.9775 0.97748023 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 1 10.5 0.5 1 1 82.956 82.956 3 0.00038899 25929 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.605 44.276 39.468 46.283 46 0 48.116 0 37 46 46 0 46 0 1 1 1 0 1 0 9640.1 6625 2897 6380 15363;15364 17736;17737 17737 2 FSMGSAVAGMLK Unmodified 1197.5886 0.58860057 2567 Q8JZN5;A0A0G2JF25 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 0 11 0 1 76.752 76.752 3 0.0013662 23060 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.198 28.326 0 0 48.552 27.379 17.608 29.346 0 0 46 28 19 28 0 0 1 1 1 1 3040.6 6626 2567 6381 15365 17738 17738 1 FSMPSLK Unmodified 808.41531 0.41531088 914 E9Q616 Ahnak yes yes 0 0 0 0 10 0 1 35.44 35.44 3 0.054304 6191 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.743 8.0801 69.293 0 75.934 84.969 65.113 91.95 65 0 74 83 69 88 1 0 1 1 1 1 7198.7 6627 914 6382 15366 17739 17739 1 FSMVIDNGIVK Deamidation (N) 1222.6268 0.62676022 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 1 0 0 8 0.816 2 2 2 76.655 76.655 2;3 3.2809E-07 26423 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.01 89.574 237.42 247.2 307.01 197.84 199.53 251.21 223 250 305 195 203 241 5 6 6 4 4 5 50531 6628 1867 6383 15367;15368;15369;15370;15371;15372 17740;17741;17742;17743;17744;17745;17746;17747 17743 758 8 FSMVIDNGIVK Unmodified 1221.6427 0.64274463 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 8.33 0.471 2 1 74.959 74.959 2;3 6.8841E-10 24872 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 136.48 77.879 0 175.66 121.12 162.12 215.49 269.94 0 167 120 158 222 259 0 3 1 2 3 3 28752 6629 1867 6383 15373;15374;15375 17748;17749;17750 17750 3 FSMVQVWPVR Unmodified 1247.6485 0.64849871 1596 P50516;D3Z1B9 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 7.4 5.24 2 1 2 78.656 78.656 2;3 7.7382E-09 21200 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.11 86.799 267.58 365.21 917.37 328.55 205.13 209.25 252 367 895 332 210 201 4 5 6 3 3 2 438100 6630 1596 6384 15376;15377;15378;15379;15380 17751;17752;17753;17754;17755;17756;17757 17757 7 FSNEEIAMATVTALR Unmodified 1651.824 0.82395647 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 8.33 2.75 1 2 1 2 1 2 78.399 78.399 2;3 1.3592E-32 27868 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 166.9 128.6 458.52 246.43 575.94 349.76 561.36 515.42 430 248 557 344 567 495 8 7 10 7 11 9 439710 6631 1309 6385 15381;15382;15383;15384;15385;15386;15387;15388;15389 17758;17759;17760;17761;17762;17763;17764;17765;17766;17767;17768;17769 17762 12 FSNEEIAMATVTALR Deamidation (N) 1652.808 0.80797206 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 0 5.67 0.471 1 2 83.9 83.9 3 0.0034264 31717 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.281 32.225 20.387 39.078 17.35 40.156 18.306 19.732 19 37 19 38 19 19 1 1 1 2 1 1 5133.2 6632 1309 6385 15390;15391;15392 17770;17771;17772 17772 368 3 FSNEEIAMATVTALR Oxidation (M) 1667.8189 0.8188711 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 1 0 6 0 1 71.314 71.314 3 0.0030179 25390 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.862 34.498 39.516 36.703 0 20.259 27.029 38.671 37 37 0 19 28 37 1 1 0 1 1 1 5247.4 6633 1309 6385 15393 17773 17773 63 1 FSNEEIAMATVTALRR Unmodified 1807.9251 0.9250675 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 8 0 1 70.506 70.506 3 0.0017721 23511 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.453 26.616 119.1 0 0 68.921 112.94 0 111 0 0 65 111 0 1 0 0 1 1 0 13113 6634 1309 6386 15394 17774 17774 1 FSNISAAK Unmodified 836.43922 0.43921744 1824 P80315;G5E839;G3UYW5;G3UXF3;G3UXG2 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 10 1.87 1 1 1 1 51.117 51.117 2 0.0029172 12072 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.82 76.459 370.87 339.94 318.42 376.56 471.51 264.77 349 348 322 370 476 255 3 3 2 3 3 1 55103 6635 1824 6387 15395;15396;15397;15398 17775;17776;17777;17778 17777 4 FSNLVLQALLVLLK Unmodified 1569.9858 0.98580049 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 13 0 1 128.17 128.17 3 2.4021E-05 45838 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.28 80.079 0 4.256 0 7.5625 4.7042 5.1958 0 4 0 7 5 5 0 1 0 1 1 1 720.97 6636 1554 6388 15399 17779 17779 1 FSNQETCVEIGESVR Unmodified 1753.7941 0.79411291 1064;2505 G3UXL2;Q9D7G0;Q8C5R8 Prps1l3;Prps1;Prps1l1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 0 0 4 0 1 57.352 57.352 3 0.0026865 19853 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.535 31.618 30.044 0 0 40.441 0 0 28 0 0 37 0 0 1 0 0 1 0 0 3594.4 6637 1064;2505 6389 15400 17780 17780 1 FSPAGPILSIR Unmodified 1156.6604 0.66044361 1484 P29341;Q9D4E6;A0A2I3BR37 Pabpc1;Pabpc6 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 0 10 0.816 1 1 1 70.337 70.337 2 1.9223E-13 20185 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.83 103.71 78.647 171.29 65.593 0 103.06 305.13 74 167 65 0 102 289 1 2 1 0 1 2 61923 6638 1484 6390 15401;15402;15403 17781;17782;17783 17783 3 FSPDGELYASGSEDGTLR Unmodified 1899.8487 0.8486509 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 0 4 0 1 63.955 63.955 2 0.0082423 22748 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.991 19.648 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2057.2 6639 3388 6391 15404 17784 17784 1 FSPDLWGVSVCTVDGQR Unmodified 1921.8992 0.89924668 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 8 0.816 1 1 1 80.965 80.965 2;3 4.4652E-06 29152 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.375 68.954 89.255 91.769 69.687 166.78 35.546 98.38 84 93 74 157 37 93 2 2 1 3 2 2 28689 6640 789 6392 15405;15406;15407 17785;17786;17787 17785 3 FSPEVPGQK Unmodified 987.50255 0.50254598 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 53.641 53.641 2 0.00097106 16285 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.98 64.861 384.8 266.45 203.09 255.47 302.02 184.05 361 278 204 250 306 176 3 3 2 3 3 1 39119 6641 1382 6393 15408;15409;15410;15411 17788;17789;17790;17791 17789 4 FSPLTANLMNLLAENGR Deamidation (N) 1860.9404 0.94038322 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 1 0 0 10.6 1.32 2 2 2 1 1 96.203 96.203 2;3 1.7882E-38 31777 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 156.29 131.32 88.695 39.209 105.15 18.354 66.918 136.3 83 38 99 18 65 130 5 3 4 2 4 5 77230 6642 3110 6394 15412;15413;15414;15415;15416;15417;15418;15419 17792;17793;17794;17795;17796;17797;17798;17799;17800 17796 1077;1078 9 FSPLTANLMNLLAENGR Oxidation (M);Deamidation (N) 1876.9353 0.93529784 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 1 1 0 10 0 1 96.518 96.518 3 0.0002333 31700 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.851 41.863 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 7513.3 6643 3110 6394 15420 17801 17801 1077;1078 194 1 FSPLTANLMNLLAENGR Unmodified 1859.9564 0.95636763 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 12 0.816 1 1 1 94 94 3 9.3346E-34 27011 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 145.73 132.14 30.919 25.593 68.158 62.048 29.944 50.855 29 25 65 61 31 48 2 2 2 3 2 2 59972 6644 3110 6394 15421;15422;15423 17802;17803;17804;17805 17803 4 FSPLTANLMNLLAENGR Oxidation (M);2 Deamidation (N) 1877.9193 0.91931342 3110 Q9DB20;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 2 1 0 11 0 1 96.876 96.876 3 0.00015276 31668 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.159 46.182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6645 3110 6394 15424 17806 17806 1077;1078 194 1 FSPNSSNPIIVSCGWDK Unmodified 1906.8883 0.88834765 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 8 0 1 73.257 73.257 3 4.1044E-06 24798 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.421 36.948 0 78.736 0 59.485 91.597 85.864 0 74 0 56 93 83 0 1 0 1 1 1 17170 6646 1792 6395 15425 17807 17807 1 FSPSPLSIK Unmodified 974.54368 0.54368251 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 10 0 1 65.625 65.625 2 0.0014696 18438 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.72 38.156 113.61 78.388 135.38 0 86.715 155.29 107 83 130 0 88 148 1 1 1 0 1 1 10159 6647 2806 6396 15426 17808 17808 1 FSPSPLSMK Unmodified 992.5001 0.50010314 2358;3224 Q9JK42;Q8BFP9 Pdk2;Pdk1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial;[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial no no 0 0 0 0 10 0 1 63.704 63.704 2 0.014782 17518 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.716 17.72 49.101 50.953 0 54.479 67.211 71.636 46 51 0 51 69 69 1 1 0 1 1 1 9861.1 6648 3224;2358 6397 15427 17809 17809 1 FSPTDFLAK Unmodified 1024.5229 0.52294707 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 76.292 76.292 2;3 0.0028474 23257 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.954 28.765 50.194 69.16 39.781 0 28.291 68.483 47 65 37 0 28 65 1 1 1 0 1 2 10962 6649 2235 6398 15428;15429 17810;17811 17811 2 FSQHVSGSR Unmodified 1003.4835 0.48354187 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A6PWP8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 7.5 0.5 1 1 27.937 27.937 3 0.0080139 4388 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.888 22.593 39.405 0 49.782 19.598 0 69.29 37 0 47 19 0 65 2 0 2 1 0 2 2794.6 6650 204 6399 15430;15431 17812;17813 17813 2 FSQICAK Unmodified 852.41637 0.41637351 1637 P56382 Atp5e ATP synthase subunit epsilon, mitochondrial yes yes 0 0 0 0 9.71 1.67 2 2 1 1 1 51.451 51.451 2;3 0.0071525 16755 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.119 47.116 806.07 624.66 918.98 844.1 1175.1 908.77 758 643 907 837 1181 879 6 6 6 7 7 6 191600 6651 1637 6400 15432;15433;15434;15435;15436;15437;15438 17814;17815;17816;17817;17818;17819;17820;17821 17821 8 FSRPLLPATTTK Unmodified 1330.7609 0.76088593 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 1 11 0.816 1 1 1 54.102 54.102 3 0.00066817 13113 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.156 34.853 137.59 221.3 742.74 215.36 259.47 349.71 130 222 739 205 269 335 1 2 3 1 2 2 91807 6652 814 6401 15439;15440;15441 17822;17823;17824 17823 3 FSSCGGGGGSFGAGGGFGSR Unmodified 1764.7274 0.72743033 657 CON__P04264 yes yes 0 0 0 0 9 0 1 55.913 55.913 3 4.1552E-06 15983 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.032 47.051 29.741 27.324 27.686 18.43 36.537 38.399 28 28 28 19 37 37 1 1 1 1 1 1 2958.5 + 6653 657 6402 15442 17825 17825 1 FSSCIDMGQELLAR Unmodified 1625.7542 0.75416235 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6.5 0.5 1 1 74.875 74.875 2;3 0.013807 27069 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.967 28.377 29.872 19.729 57.971 28.884 19.874 29.848 28 19 56 28 19 28 1 1 2 1 1 1 3415.7 6654 2186 6403 15443;15444 17826;17827 17826 2 FSSFEEAVK Unmodified 1042.4971 0.49712625 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 64.717 64.717 2;3 0.0006489 21453 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.12 65.714 653.06 601.98 308.14 674.75 492.76 755.59 612 612 315 641 504 722 6 7 3 6 4 7 78643 6655 644 6404 15445;15446;15447;15448;15449 17828;17829;17830;17831;17832;17833;17834 17832 7 FSSQEAASSFGDDR Unmodified 1502.6274 0.62736516 2782 Q91ZA3;H3BL62 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes no 0 0 0 0 4 0 1 51.74 51.74 2 1.5958E-06 17115 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.65 87.884 0 0 20.558 0 0 39.442 0 0 19 0 0 37 0 0 1 0 0 1 2119.2 6656 2782 6405 15450 17835 17835 1 FSSQQASTK Unmodified 982.47197 0.47197413 541 Q99JF8;A2BI12 Psip1 PC4 and SFRS1-interacting protein yes no 0 0 0 0 8 0 1 39.072 39.072 2 0.0041367 8776 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.789 48.465 39.34 26.5 38.246 0 46.807 38.106 37 28 37 0 46 37 1 1 1 0 1 1 2718 6657 541 6406 15451 17836 17836 1 FSSSIVGPYDEIILPPESK Unmodified 2077.0619 0.06193814 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 6.5 0.5 1 1 85.274 85.274 3;4 2.1007E-06 31173 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.47 55.812 9.6017 0 9.2918 8.9299 18.787 19.718 9 0 9 9 19 19 1 0 1 1 1 1 1597.6 6658 165 6407 15452;15453 17837;17838 17838 2 FSSSSGYGGGSSR Unmodified 1234.5214 0.52144352 661 CON__P35527 yes yes 0 0 0 0 7 0.816 1 1 1 37.403 37.403 2 1.9613E-13 8674 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.69 94.884 69.503 26.832 17.886 59.687 24.19 117.64 65 28 19 56 28 111 2 1 1 2 2 3 12088 + 6659 661 6408 15454;15455;15456 17839;17840;17841 17840 3 FSSVLWEEK Unmodified 1123.555 0.55497548 2857 Q99LB2;A0A2I3BRG8 Dhrs4 Dehydrogenase/reductase SDR family member 4 yes no 0 0 0 0 8 0 1 72.366 72.366 3 0.0025764 24426 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.451 36.563 0 58.974 36.496 0 57.278 37.808 0 56 37 0 56 37 0 1 1 0 1 1 2729.9 6660 2857 6409 15457 17842 17842 1 FSTETTFLVDKYEIL Unmodified 1804.9135 0.91348299 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 1 7 0 1 91.028 91.028 3 0.031981 33732 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.967 28.83 20.126 18.386 28.265 18.56 27.767 19.462 19 19 28 19 28 19 1 1 1 1 1 1 1189.9 6661 2073 6410 15458 17843 17843 1 FSTFSGSITGPLYTHR Unmodified 1769.8737 0.87368386 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.8 3.97 1 2 1 1 65.688 65.688 3;4 3.7788E-34 16141 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.07 136.43 376.15 395.24 171.3 316.7 504.36 423.79 353 398 176 306 510 408 5 6 2 4 5 4 156680 6662 154 6411 15459;15460;15461;15462;15463 17844;17845;17846;17847;17848;17849;17850;17851 17851 8 FSTGGLSISGLNPLPNPSYLLPPR Unmodified 2496.3377 0.33765949 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.08 5.22 5 2 2 1 2 93.35 93.35 3;4;5 2.3453E-23 30366 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.99 107.31 280.6 231.85 195.7 168.96 125.92 207.74 269 232 190 163 125 199 12 10 9 13 7 11 243000 6663 1557 6412 15464;15465;15466;15467;15468;15469;15470;15471;15472;15473;15474;15475 17852;17853;17854;17855;17856;17857;17858;17859;17860;17861;17862;17863;17864;17865;17866;17867;17868;17869;17870;17871;17872;17873;17874;17875;17876;17877 17861 26 FSTISTLGDISVLK Unmodified 1479.8185 0.81846039 2263 Q6ZQ18;A0A1W2P7T9 Efr3b Protein EFR3 homolog B yes no 0 0 0 0 9 0 1 84.407 84.407 3 0.0010277 29282 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.345 42.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2357.5 6664 2263 6413 15476 17878 17878 1 FSTPDAAPVSTEPAWLALAK Unmodified 2071.0626 0.062606842 901 E9Q5L4;E9Q3Y7;Q5PR69 C530008M17Rik;Kiaa1211 Uncharacterized protein KIAA1211 yes no 0 0 0 0 8 0 1 85.969 85.969 3 0.0074561 30814 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.017 21.333 19.219 18.92 0 0 29.288 0 18 19 0 0 28 0 1 1 0 0 1 0 1099 6665 901 6414 15477 17879 17879 1 FSTPEQAAK Unmodified 977.48181 0.48181054 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 7 0.816 1 1 1 47.011 47.011 2;3 0.00042787 13929 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.07 85.716 247.58 178.86 77.15 179.39 175.47 231.64 232 185 74 166 176 222 3 3 1 2 2 3 26586 6666 1110 6415 15478;15479;15480 17880;17881;17882 17880 3 FSVEEIIQK Unmodified 1091.5863 0.58627561 1801 P70202 Lxn Latexin yes yes 0 0 0 0 9.33 2.62 1 1 1 74.212 74.212 2;3 0.00020504 25945 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.75 47.742 253.34 72.394 100.13 144.57 100.52 200.74 237 74 93 134 102 191 3 1 1 2 1 3 31929 6667 1801 6416 15481;15482;15483 17883;17884;17885 17883 3 FSVLQYVVPEVK Unmodified 1406.781 0.78095267 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 10.5 0.5 1 1 87.594 87.594 3 0.00014915 28212 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.431 56.577 39.342 78.736 60.394 0 0 108.73 37 74 56 0 0 102 1 1 1 0 0 1 11952 6668 1438 6417 15484;15485 17886;17887;17888 17886 3 FSVNLDVK Unmodified 920.49673 0.49673232 1441 P23927;A0A1L1SRG5 Cryab Alpha-crystallin B chain yes no 0 0 0 0 8.67 0.471 1 2 67.094 67.094 2;3 0.0025915 21272 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.639 40.748 88.653 88.312 68.263 155.97 91.784 69.29 83 83 65 148 93 65 1 1 1 2 1 1 12780 6669 1441 6418 15486;15487;15488 17889;17890;17891 17891 3 FSVNMPHK Unmodified 958.46947 0.46947171 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 10 0 1 52.337 52.337 3 0.012893 12550 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.8 17.82 59.663 84.289 0 0 77.404 0 56 83 0 0 74 0 1 1 0 0 1 0 6208.7 6670 1388 6419 15489 17892 17892 1 FSVSPVVR Unmodified 889.50215 0.50215205 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 11 2 1 1 54.608 54.608 2 2.7598E-05 15481 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 161.12 113.01 0 116.96 68.705 97.554 0 0 0 111 74 93 0 0 0 1 1 1 0 0 87104 6671 1652 6420 15490;15491 17893;17894 17893 2 FSWGAEGQK Unmodified 1008.4665 0.46649483 991 F6RT34;F6VME3 Mbp yes no 0 0 0 0 9.25 2.28 1 1 1 1 58.194 58.194 2 3.3491E-05 20003 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.26 101.57 426.04 567.63 350.99 310.46 1033.3 747.43 401 566 357 315 1026 725 3 4 3 3 4 3 97225 6672 991 6421 15492;15493;15494;15495 17895;17896;17897;17898 17898 4 FSWGAEGQKPGFGYGGR Unmodified 1799.838 0.83796706 991 F6RT34;F6VME3 Mbp yes no 0 0 0 1 9.5 3.46 1 2 1 2 1 1 62.922 62.922 2;3;4 2.1202E-38 17294 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 155.37 107.75 1838.2 1724.6 2156.9 1589.8 3588.2 3430.7 1730 1744 2158 1628 3596 3311 8 8 8 8 8 7 625330 6673 991 6422 15496;15497;15498;15499;15500;15501;15502;15503 17899;17900;17901;17902;17903;17904;17905;17906;17907;17908 17903 10 FSWHVIK Unmodified 915.49667 0.49667274 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 59.842 59.842 3 0.0082789 15460 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.616 38.571 318.82 78.177 90.687 281.62 371.54 317.73 298 83 93 269 378 308 2 1 1 2 2 2 33628 6674 1566 6423 15504;15505 17909;17910 17909 2 FSYIPEAK Unmodified 953.48583 0.48583328 1519 P35436 Grin2a Glutamate receptor ionotropic, NMDA 2A yes yes 0 0 0 0 8 0 1 62.135 62.135 2 0.034782 19610 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.825 48.525 39.305 36.116 35.963 38.298 0 39.442 37 37 37 37 0 37 1 1 1 1 0 1 3959.8 6675 1519 6424 15506 17911 17911 1 FSYLPIQK Unmodified 994.54877 0.54876789 1004 F6VSK8;Q61739 Itga6 Integrin alpha-6;Integrin alpha-6 heavy chain;Integrin alpha-6 light chain yes no 0 0 0 0 11 0 1 69.484 69.484 2 0.040534 19839 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.836 43.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6676 1004 6425 15507 17912 17912 1 FTAGDFSTTVIQNVNK Unmodified 1740.8683 0.86826413 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 10 2.16 1 1 1 73.758 73.758 3 8.8347E-25 25047 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.1 106.9 196.53 130.94 318.57 82.509 326.3 287.04 185 139 306 83 325 278 2 2 3 1 3 3 72764 6677 1648 6426 15508;15509;15510 17913;17914;17915 17913 3 FTANVGIQIVGDDLTVTNPK Unmodified 2101.1055 0.10553429 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 10.4 2.12 1 1 1 1 1 1 2 82.594 82.594 3;4 7.1264E-14 29965 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.88 83.652 346.61 287.07 205.97 212.25 384.01 220.2 325 288 204 201 380 210 9 8 5 5 7 7 87583 6678 1399 6427 15511;15512;15513;15514;15515;15516;15517;15518 17916;17917;17918;17919;17920;17921;17922;17923;17924;17925;17926;17927 17916 12 FTASAGIQVVGDDLTVTNPK Unmodified 2032.0477 0.047685059 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 8.33 3.29 2 2 5 3 1 2 2 1 3 79.562 79.562 2;3;4 5.9782E-23 27021 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.14 99.147 840.18 609.43 806.85 956.9 812.2 1095.1 788 604 787 911 816 1047 20 15 20 20 16 22 338820 6679 1398 6428 15519;15520;15521;15522;15523;15524;15525;15526;15527;15528;15529;15530;15531;15532;15533;15534;15535;15536;15537;15538;15539 17928;17929;17930;17931;17932;17933;17934;17935;17936;17937;17938;17939;17940;17941;17942;17943;17944;17945;17946;17947;17948;17949;17950;17951;17952;17953;17954;17955;17956;17957;17958;17959;17960;17961 17936 34 FTASAGIQVVGDDLTVTNPK Deamidation (N) 2033.0317 0.031700644 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 1 0 0 6 0 1 78.29 78.29 3 0.0024917 28621 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.587 33.817 20.292 18.848 0 20.767 0 0 19 19 0 19 0 0 1 1 0 1 0 0 1361.1 6680 1398 6428 15540 17962 17962 482 1 FTATASLGVIHK Unmodified 1243.6925 0.69247202 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 12 0 1 60.224 60.224 3 0.00029304 14258 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.451 44.234 39.701 0 0 79.538 71.441 67.251 37 0 0 74 74 65 1 0 0 1 1 1 3757.9 6681 1943 6429 15541 17963 17963 1 FTDDTFDPELAATIGVDFK Unmodified 2100.9892 0.98916713 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 5 0 1 94.101 94.101 3 6.5092E-06 35194 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.43 50.149 0 8.3938 7.0704 0 8.8735 15.737 0 8 7 0 9 15 0 1 1 0 1 1 1002.4 6682 1518 6430 15542 17964 17964 1 FTDDYQLFEELGK Unmodified 1603.7406 0.740604 2818 Q923T9;A0A2I3BQP6 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 7.75 3.11 1 1 1 1 86.019 86.019 2;3 5.7537E-05 33652 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.631 68.602 80.339 27.052 133.92 181.88 133.49 204.06 75 28 130 176 139 195 3 1 1 2 1 3 27801 6683 2818 6431 15543;15544;15545;15546 17965;17966;17967;17968 17968 4 FTDEESR Unmodified 882.37193 0.37192574 23 A0A087WRN1;A0A087WQA0;F8WI22;Q8K019 Bclaf1 Bcl-2-associated transcription factor 1 yes no 0 0 0 0 3 0 1 35.811 35.811 2 0.053215 10231 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.692 42.05 0 0 48.538 27.711 0 78.884 0 0 46 28 0 74 0 0 1 1 0 1 28373 6684 23 6432 15547 17969 17969 1 FTDEEVDELYR Unmodified 1414.6252 0.62523989 1923 Q3THE2;Q6ZWQ9 Myl12b;Myl12a Myosin regulatory light chain 12B yes no 0 0 0 0 5 4.05 1 2 1 1 65.953 65.953 2;3 3.2934E-09 23920 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 133.81 108.37 59.476 84.597 102.91 135.96 0 207.87 56 83 102 130 0 195 3 3 2 3 0 5 80573 6685 1923 6433 15548;15549;15550;15551;15552 17970;17971;17972;17973;17974;17975 17972 6 FTDEYQLFEELGK Unmodified 1617.7563 0.75625407 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;E9QAJ4;D6RDQ8 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 8 3.08 1 1 1 1 86.806 86.806 2;3 3.633E-05 33210 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.531 65.327 109.69 44.359 102.29 109.11 196.68 28.814 103 46 102 106 195 28 3 1 3 2 4 1 29391 6686 103 6434 15553;15554;15555;15556 17976;17977;17978;17979 17976 4 FTDEYQLYEDIGK Unmodified 1619.7355 0.73551862 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 7.67 3.82 1 2 1 2 76.646 76.646 2;3;4 1.5925E-10 27935 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.23 92.378 633.36 423.17 380.8 467.86 411.33 602 594 435 380 445 426 575 7 5 5 5 6 7 199090 6687 1475 6435 15557;15558;15559;15560;15561;15562 17980;17981;17982;17983;17984;17985;17986;17987;17988 17985 9 FTDFDEVR Unmodified 1027.4611 0.4610751 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 0 4.5 0.5 1 1 60.229 60.229 2 0.023686 20825 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.064 50.892 29.54 46.189 45.633 76.576 84.346 0 28 46 46 74 84 0 1 1 1 2 2 0 6496.6 6688 960;1082 6436 15563;15564 17989;17990 17990 2 FTDFDEVRHEIEAETDR Unmodified 2107.9447 0.94467655 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 1 3 0 1 70.583 70.583 4 0.022231 26207 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.645 23.031 0 0 9.738 0 0 9.594 0 0 9 0 0 9 0 0 1 0 0 1 2240.2 6689 960 6437 15565 17991 17991 1 FTDFEEVR Unmodified 1041.4767 0.47672516 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 7.33 4.03 1 1 1 60.421 60.421 2 0.0088982 21338 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.64 67.831 380.2 414.83 211.1 502.88 487.93 470.29 357 416 212 480 504 452 2 2 2 3 3 2 87392 6690 118;1534 6438 15566;15567;15568 17992;17993;17994 17992 3 FTEEYQLFEELGK Unmodified 1631.7719 0.77190413 1355 P11798;F8WIS9;D3Z7K9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 8.44 3.34 2 2 1 1 3 86.523 86.523 2;3;4 1.3845E-18 33857 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 149.31 115.42 669.5 850.34 654.25 792.25 806.66 873.53 630 851 662 771 834 837 6 10 8 10 12 9 669150 6691 1355 6439 15569;15570;15571;15572;15573;15574;15575;15576;15577 17995;17996;17997;17998;17999;18000;18001;18002;18003;18004;18005;18006;18007;18008 18005 14 FTEPVVVLPSGTFLSLK Unmodified 1833.0288 0.028787518 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 10.6 1.36 1 2 1 1 92.845 92.845 3;4 1.6842E-06 33057 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.13 57.552 99.701 125.92 0 150.62 204.12 155.72 93 122 0 139 204 149 3 4 0 3 4 4 25698 6692 2041 6440 15578;15579;15580;15581;15582 18009;18010;18011;18012;18013;18014;18015 18009 7 FTFEEAEAECTSR Unmodified 1575.6511 0.65113707 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;Q8BS97 Vcan Versican core protein yes no 0 0 0 0 4.5 0.5 1 1 59.463 59.463 2;3 6.1219E-05 20714 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.183 86.179 0 20.216 29.01 48.95 36.791 58.646 0 19 28 47 37 56 0 1 1 2 1 2 17592 6693 851 6441 15583;15584 18016;18017 18016 2 FTFGLDWVPK Unmodified 1208.623 0.62299547 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 11.8 1.17 1 1 1 2 88.45 88.45 2;3 0.0012603 34882 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.79 49.911 99.291 74.388 150.56 181.45 103.35 66.848 93 74 148 176 102 65 2 2 3 4 2 2 28693 6694 1641 6442 15585;15586;15587;15588;15589 18018;18019;18020;18021;18022 18022 5 FTFIPEQSFDQLLQLQEITLHNNR Unmodified 2930.4927 0.49265658 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 8.5 0.5 2 2 96.531 96.531 3;4 1.8134E-16 34749 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.565 78.244 31.002 24.199 26.658 17.023 0 33.046 29 24 25 16 0 31 3 2 3 3 0 4 31071 6695 1093 6443 15590;15591;15592;15593 18023;18024;18025;18026;18027;18028;18029;18030 18024 8 FTFVTPTFYR Unmodified 1277.6445 0.64445919 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 8 4.97 1 1 1 78 78 2 0.007592 27237 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.056 49.155 69.513 0 39.062 149.6 0 69.29 65 0 37 139 0 65 2 0 1 3 0 1 16253 6696 1802 6444 15594;15595;15596 18031;18032;18033 18031 3 FTGALYPK Unmodified 895.48035 0.48035398 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 13 0 1 60.703 60.703 2 0.020967 21488 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.674 41.479 0 59.584 0 159.08 142.88 134.5 0 56 0 148 148 130 0 1 0 1 1 1 6873.1 6697 967 6445 15597 18034 18034 1 FTGGIGNK Unmodified 792.413 0.41300269 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 9.8 1.72 1 2 1 1 50.263 50.263 2;3 0.0046258 13203 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.1 72.124 350.88 76.332 293.88 231.28 189.96 103.31 329 79 287 223 185 102 3 1 3 2 1 1 50571 6698 1579 6446 15598;15599;15600;15601;15602 18035;18036;18037;18038;18039 18036 5 FTGSEIR Unmodified 808.40792 0.40791731 2998;2988 Q9CZ13;Q9CXT8 Uqcrc1;Pmpcb Cytochrome b-c1 complex subunit 1, mitochondrial;Mitochondrial-processing peptidase subunit beta no no 0 0 0 0 8.67 3.09 1 1 1 42.823 42.823 2 0.021617 12552 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.2 64.515 354.81 404.61 407.7 332.45 400.7 463.18 334 399 399 324 409 443 3 3 3 3 3 3 142240 6699 2998;2988 6447 15603;15604;15605 18040;18041;18042;18043 18043 4 FTHGFQNIVDAYGIGTYR Unmodified 2057.9959 0.99592426 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 10.8 1.34 1 2 1 1 1 73.083 73.083 3;4 1.6151E-07 24106 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.23 84.111 327.49 193.43 320.56 399.3 408.56 382.61 307 199 315 388 408 367 5 3 4 5 4 5 180450 6700 1151 6448 15606;15607;15608;15609;15610;15611 18044;18045;18046;18047;18048;18049;18050 18044 7 FTIATLPPP Unmodified 955.53787 0.53786886 2081 Q60692 Psmb6 Proteasome subunit beta type-6 yes yes 0 0 0 0 9.5 0.5 1 1 82.375 82.375 2 0.00097093 28396 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.98 87.436 166.09 114.59 121.15 158.14 175.35 131.37 156 117 119 151 173 125 3 2 2 2 2 2 27992 6701 2081 6449 15612;15613 18051;18052;18053 18052 3 FTIGDHSR Unmodified 931.45118 0.45117911 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 38.854 38.854 3 0.00080158 9312 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 119.86 81.703 0 39.368 87.356 84.918 89.731 106.17 0 37 83 84 93 102 0 1 1 2 2 2 18741 6702 1263 6450 15614;15615 18054;18055 18055 2 FTISDHPQPIDPLLK Unmodified 1719.9196 0.91957142 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6 0 1 71.357 71.357 3 0.0010025 25488 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.656 39.123 29.856 37.355 0 20.075 36.791 28.798 28 37 0 19 37 28 1 1 0 1 1 1 4582.9 6703 2264 6451 15616 18056 18056 1 FTITPPSAQVVGVLK Unmodified 1555.8974 0.89737941 1563 P47753;Q5RKN9 Capza1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 0 11 1.22 2 1 1 79.848 79.848 2;3 3.523E-07 24959 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.245 41.888 127.87 0 149.75 0 148.84 173.77 120 0 139 0 148 167 1 0 1 0 1 1 15449 6704 1563 6452 15617;15618;15619;15620 18057;18058;18059;18060 18058 4 FTLDCTHPVEDGIMDAANFEQFLQER Unmodified 3082.3801 0.38007094 1790 P67984 Rpl22 60S ribosomal protein L22 yes yes 0 0 0 0 5 0 1 92.73 92.73 4 0.00083002 34914 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.668 29.036 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 739.49 6705 1790 6453 15621 18061 18061 1 FTLGSVAGAVGATAVYPIDLVK Unmodified 2148.1831 0.18305633 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 9.43 3.66 1 1 2 1 1 1 95.964 95.964 3;4 5.236E-28 27490 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.98 114.06 29.882 57.518 69.288 101.47 50.518 81.439 28 56 68 97 51 77 2 3 4 6 2 4 83774 6706 2396 6454 15622;15623;15624;15625;15626;15627;15628 18062;18063;18064;18065;18066;18067;18068 18067 7 FTLNPNTTGVQNPHIER Unmodified 1936.9755 0.97552317 1567 P47809;B1ATL6 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 0 7 0 1 54.194 54.194 3 8.2846E-07 16471 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.794 64.847 0 0 29.01 28.875 0 39.442 0 0 28 28 0 37 0 0 1 1 0 1 4474.7 6707 1567 6455 15629 18069 18069 1 FTLNPNTTGVQNPHIER Deamidation (N) 1937.9595 0.95953875 1567 P47809;B1ATL6 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 1 0 0 8 0 1 53.972 53.972 3 0.0057743 15728 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.436 26.841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6708 1567 6455 15630 18070 18070 597 1 FTLPGPSTEGPAK Unmodified 1300.6663 0.66631685 1916 Q3TDK6;A0A0J9YUG1 Rogdi Protein rogdi homolog yes no 0 0 0 0 9.33 2.62 1 1 1 63.314 63.314 3 2.4837E-11 20150 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.87 82.182 139.09 57.837 171.64 242.16 62.871 165.57 130 56 167 232 65 157 2 1 2 3 1 2 24740 6709 1916 6456 15631;15632;15633 18071;18072;18073 18072 3 FTLSCTETLMSELGNIAK Unmodified 2013.9751 0.97511374 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 8 0 2 95.417 95.417 3;4 2.3333E-13 34429 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.4 98.13 39.652 0 31.801 58.894 22.245 14.289 37 0 32 56 23 14 1 0 2 2 1 1 7509.7 6710 3307 6457 15634;15635 18074;18075 18075 2 FTLVAWDPR Unmodified 1103.5764 0.57637963 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 0 11.3 1.25 1 1 1 76.746 76.746 2;3 0.0022748 23455 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.741 51.294 148.06 242.97 235.84 80.234 187.19 185.48 139 241 232 83 185 176 2 3 3 1 2 2 68614 6711 2636 6458 15636;15637;15638 18076;18077;18078;18079 18076 4 FTMELAK Unmodified 838.42588 0.42587556 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 64.955 64.955 2 0.037575 20870 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.229 20.078 288.74 150.38 216.06 139.48 410.63 222.5 271 158 209 130 406 216 2 1 1 1 2 1 67296 6712 1458 6459 15639;15640 18080;18081 18080 2 FTPGTFTNQIQAAFR Unmodified 1697.8526 0.85255449 1374 P14206;A0A1L1SRW0 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 11 1.29 1 1 2 1 1 79.77 79.77 2;3 1.9381E-30 25036 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 159.12 128.15 138.96 154.8 310.01 116.96 272.1 299.24 130 148 296 111 268 288 2 3 4 2 4 5 167350 6713 1374 6460 15641;15642;15643;15644;15645;15646 18082;18083;18084;18085;18086;18087 18083 6 FTPPAFIRPTR Unmodified 1301.7244 0.72444085 2303 Q80TL4 Kiaa1045 Protein KIAA1045 yes yes 0 0 0 1 8 4.97 1 1 1 58.85 58.85 3 2.4984E-05 19230 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.92 50.314 462.98 517.93 161.11 850.2 660.14 794.52 433 513 168 798 683 763 2 2 1 3 2 3 202830 6714 2303 6461 15647;15648;15649 18088;18089;18090 18088 3 FTQAGSEVSALLGR Unmodified 1434.7467 0.74669243 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.9 2.17 2 1 2 1 1 1 2 73.808 73.808 2;3 8.5023E-58 27730 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 199.03 157.04 1742.3 792.83 1195 1374.6 1718.3 1808.7 1633 810 1178 1328 1753 1740 10 7 9 8 9 10 937450 6715 1642 6462 15650;15651;15652;15653;15654;15655;15656;15657;15658;15659 18091;18092;18093;18094;18095;18096;18097;18098;18099;18100;18101;18102;18103;18104;18105 18105 15 FTQDTQPHYIYSPR Unmodified 1751.8267 0.82673367 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7 0 1 51.139 51.139 3 8.4781E-05 15046 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.51 77.41 78.694 53.041 73.959 56.8 0 0 74 56 74 56 0 0 1 1 1 1 0 0 5617.4 6716 3204 6463 15660 18106 18106 1 FTQISPVWLQLK Unmodified 1458.8235 0.82348619 159 A0A1B0GSH5;D3YWG2;G8JL55;A0A0R4J058;A0A0R4J242;Q922Q9 Chid1 Chitinase domain-containing protein 1 yes no 0 0 0 0 6.5 5.5 1 1 87.37 87.37 3 0.0001482 24540 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.494 45.21 99.027 83.771 57.066 89.379 46.235 59.212 93 84 56 83 47 56 3 2 2 2 2 2 10846 6717 159 6464 15661;15662 18107;18108;18109 18108 3 FTQNLSAFR Unmodified 1082.5509 0.55089316 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 0 9.5 0.5 1 1 60.166 60.166 2 0.028516 17969 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.645 30.747 78.637 52.881 83.809 54.505 90.8 115.74 74 56 83 56 93 111 1 1 1 1 1 1 5608.6 6718 383 6465 15663;15664 18110;18111 18110 2 FTSAGQASK Unmodified 895.43995 0.43994572 2794 Q921F4 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 0 8 0 1 41.43 41.43 2 0.00088725 9870 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.3 63.54 54.329 29.698 41.047 52.55 39.69 53.233 51 32 42 51 42 51 1 1 1 1 1 1 5955.3 6719 2794 6466 15665 18112 18112 1 FTSSPGLSTEDLKR Unmodified 1536.7784 0.77838649 1 A0A067XG53;O70589 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 1 7.5 0.5 1 1 55.244 55.244 3 0.00014098 16313 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.911 57.083 108.72 80.074 54.246 76.436 120.4 77.288 102 83 56 74 121 74 2 2 1 1 2 1 6604 6720 1 6467 15666;15667 18113;18114 18114 2 FTTEEEVDYTAEK Unmodified 1560.6831 0.6831487 3377 Q9Z1J3;F7CZD1;F6TXD3 Nfs1;Gm28036 Cysteine desulfurase, mitochondrial yes no 0 0 0 0 3 0 1 60.104 60.104 3 0.00012969 21313 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.927 59.237 29.577 36.581 47.428 0 0 49.036 28 37 46 0 0 46 1 1 1 0 0 1 2141.8 6721 3377 6468 15668 18115 18115 1 FTTGDAMSK Unmodified 956.42733 0.42733213 2931 Q9CQI6;A0A1D5RLP1 Cotl1 Coactosin-like protein yes no 0 0 0 0 7.5 0.5 1 1 51.982 51.982 2 0.00042787 15440 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.07 97.555 148.25 57.458 102.01 93.466 111.81 0 139 65 102 93 111 0 1 1 1 1 1 0 9020.4 6722 2931 6469 15669;15670 18116;18117 18116 2 FTTSDVAAIETDK Unmodified 1396.6722 0.67219008 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 5 0 1 65.584 65.584 3 0.019332 23233 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.644 19.111 59.812 0 46.429 68.278 0 69.29 56 0 46 65 0 65 1 0 1 1 0 1 3874.8 6723 1055 6470 15671 18118 18118 1 FTTSDVAAIETDKEGVQNAK Unmodified 2123.0382 0.038242585 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 1 7.4 3.01 1 1 2 1 64.33 64.33 3;4 2.17E-29 21275 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 139.49 119.4 386.86 267.59 554.76 384.42 185.59 513.85 363 261 545 374 186 487 4 2 4 2 3 4 85295 6724 1055 6471 15672;15673;15674;15675;15676 18119;18120;18121;18122;18123 18121 5 FTVAELK Unmodified 806.4538 0.45380487 1990 Q3UJB0 Sf3b2 yes yes 0 0 0 0 8 0 1 64.188 64.188 2 0.04469 20552 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.854 25.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6725 1990 6472 15677 18124 18124 1 FTVIRNGQLLQVPVAALVVGDIAQVK Deamidation (N) 2748.5902 0.59018578 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 1 0 1 10 0 1 99.307 99.307 4 6.0778E-07 32449 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.061 42.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1248.7 6726 487 6473 15678 18125 18125 121 1 FTVLNQTWVLK Deamidation (N) 1348.7391 0.73908786 3263 Q9QXA1 Cyhr1 Cysteine and histidine-rich protein 1 yes yes 0 1 0 0 12 0 1 83.447 83.447 3 0.0076708 23141 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.404 29.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6727 3263 6474 15679 18126 18126 1119 1 FTVLNYK Unmodified 883.48035 0.48035398 1941 Q8VDQ1;Q3TXN1 Ptgr2 Prostaglandin reductase 2 yes no 0 0 0 0 10.7 0.471 1 2 65.572 65.572 2;3 0.0054276 17967 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.068 75.767 353.49 350.25 344.81 321.9 307.25 121.81 333 357 353 317 307 120 2 2 2 2 2 1 47513 6728 1941 6475 15680;15681;15682 18127;18128;18129 18129 3 FTVLTESAAK Unmodified 1065.5706 0.57062555 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 8.86 1.96 2 2 1 1 1 63.216 63.216 2;3 3.4043E-61 20068 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 218.55 156.08 804.05 495.33 554.73 610 793.7 913.29 754 512 539 602 814 875 6 4 5 8 7 5 232160 6729 1329 6476 15683;15684;15685;15686;15687;15688;15689 18130;18131;18132;18133;18134;18135;18136;18137 18132 8 FTVTPSTTQVVGILK Unmodified 1589.9029 0.90285872 1564 P47754 Capza2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 0 10.9 1.17 1 2 3 1 1 78.017 78.017 2;3;4 3.2882E-29 23613 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 153.25 120.64 476.86 517.01 752.12 449.21 621.97 504.42 450 515 742 448 628 483 6 3 6 3 6 3 264280 6730 1564 6477 15690;15691;15692;15693;15694;15695;15696;15697 18138;18139;18140;18141;18142;18143;18144;18145;18146 18142 9 FTWFAGEK Unmodified 984.47052 0.47051757 1584 P48774;E9PVM7;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 10 1 1 1 72.755 72.755 2;3 0.0025915 21282 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.639 59.241 148.6 108.08 206.73 217.12 280.99 269.14 139 111 200 213 287 260 1 1 1 1 2 2 27331 6731 1584 6478 15698;15699 18147;18148 18148 2 FTYFSSLSPMAR Unmodified 1405.67 0.67002202 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 0 12 0 1 75.974 75.974 2 1.1821E-05 20155 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.26 77.696 0 29.152 38.285 0 37.384 38.375 0 28 37 0 37 37 0 1 1 0 1 1 4488.9 6732 2496 6479 15700 18149 18149 1 FTYTLGEGMWLPLSK Unmodified 1741.8749 0.87492941 2110 Q61137;A0A0A6YWE6;Q3TPU9;A0A0A6YXJ4;A0A0A6YWD1 Astn1 Astrotactin-1 yes no 0 0 0 0 11 0 1 93.082 93.082 3 0.0012049 30006 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.823 37.661 0 0 0 50.278 0 59.696 0 0 0 46 0 56 0 0 0 1 0 1 4385.9 6733 2110 6480 15701 18150 18150 1 FVAAQAAVAPAEELAFTDSLITR Unmodified 2390.2482 0.24817578 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 7 0 1 92.734 92.734 3 1.4196E-09 34334 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.963 51.348 0 19.729 29.112 0 0 19.188 0 19 28 0 0 18 0 1 1 0 0 1 2454.3 6734 3203 6481 15702 18151 18151 1 FVADGIFK Unmodified 895.48035 0.48035398 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 10 2.16 1 1 1 71.418 71.418 2 0.0065254 23975 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.46 74.383 206.75 162.06 100.67 213.63 119.6 108.73 194 167 102 203 120 102 2 2 1 2 1 1 20058 6735 1755 6482 15703;15704;15705 18152;18153;18154 18152 3 FVAELWK Unmodified 891.48544 0.48543935 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 10.7 1.7 1 1 1 76.017 76.017 2;3 0.015423 23225 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.432 35.79 119.31 118.1 144.92 198.38 267.04 152.01 112 111 139 194 269 149 2 1 2 3 3 2 19697 6736 1974 6483 15706;15707;15708 18155;18156;18157 18156 3 FVAPEEVLPFTEGDILEK Unmodified 2032.0405 0.040474416 773 Q99LD9;D3Z487 Eif2b2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 0 6 0 1 92.673 92.673 3 7.1154E-06 35093 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.475 43.642 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6737 773 6484 15709 18158 18158 1 FVAPGALGNAPWVALVAR Unmodified 1808.0097 0.0097238309 1956 Q3U2C5 Rnf149 E3 ubiquitin-protein ligase RNF149 yes yes 0 0 0 0 12 0 1 91.83 91.83 3 0.0009845 26207 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.537 23.346 20.387 0 0 19.527 7.8291 20.031 19 0 0 18 9 19 1 0 0 1 1 1 988.08 6738 1956 6485 15710 18159 18159 1 FVASNQR Unmodified 820.41915 0.4191507 398;400 A0A2R8VK70;A0A2R8VI30;Q61735;A0A2R8VJU9;A0A2R8W6P0;D3Z187;A0A2R8VI94 Cd47 Leukocyte surface antigen CD47 no no 0 0 0 0 8 0 1 34.296 34.296 2 0.043851 6773 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.178 54.655 39.298 26.383 45.43 57.492 53.608 67.76 37 28 46 56 56 65 1 1 1 1 1 1 3951.6 6739 398;400 6486 15711 18160 18160 1 FVAVPEGIPTETR Unmodified 1414.7456 0.7456298 563 A9DA50;Q9D1T0 Lingo1 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 yes no 0 0 0 0 6 0 1 67.028 67.028 3 5.9865E-07 23338 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.705 59.329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6740 563 6487 15712 18161 18161 1 FVAVTSSNAAK Unmodified 1093.5768 0.57677356 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 10.5 1.66 2 1 1 51.995 51.995 2;3 7.172E-26 14155 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 183.27 116.76 173.58 177.49 282.9 250.15 310.18 178.77 163 181 274 241 305 176 2 3 2 2 2 2 65904 6741 3172 6488 15713;15714;15715;15716 18162;18163;18164;18165 18163 4 FVCAQLPNAVLESISVIDTPGILSGEK Unmodified 2856.4943 0.49429607 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 0 10.2 2.32 2 1 2 105.7 105.7 3;4 3.3741E-17 36999 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.896 57.176 30.525 9.7661 50.578 23.907 34.518 7.462 29 10 48 23 33 7 4 2 3 2 1 1 14199 6742 3271 6489 15717;15718;15719;15720;15721 18166;18167;18168;18169;18170 18168 5 FVDDLFETIFSTAHR Unmodified 1796.8733 0.87334951 2317;1802 Q80UG2;P70206 Plxna4;Plxna1 Plexin-A4;Plexin-A1 no no 0 0 0 0 9 0 1 98.461 98.461 3 0.0046561 35301 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.723 24.77 15.977 0 19.812 14.94 14.579 12.376 15 0 19 15 15 12 1 0 1 1 1 1 1236.3 6743 2317;1802 6490 15722 18171 18171 1 FVDLYGAQK Unmodified 1039.5338 0.53384611 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 10.3 1.89 2 1 65.451 65.451 2;3 0.0016333 20540 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.802 68.728 208.16 87.061 74.845 130.01 187.18 165.03 194 83 74 121 185 158 2 1 1 2 2 2 26639 6744 2435 6491 15723;15724;15725 18172;18173;18174 18173 3 FVEEIIEETK Unmodified 1235.6285 0.62853436 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 4 0 1 81.693 81.693 2 0.013317 30807 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.679 49.632 0 48.492 27.02 8.2266 0 29.848 0 46 28 9 0 28 0 1 1 1 0 1 985.29 6745 154 6492 15726 18175 18175 1 FVEEIIEETKVEDEK Unmodified 1835.904 0.90404051 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 4 0 1 81.268 81.268 4 0.0066903 30600 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.408 34.717 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 1084.8 6746 154 6493 15727 18176 18176 1 FVEGLPINDFSR Deamidation (N) 1393.6878 0.68778057 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 1 0 0 7 2.56 2 2 2 1 78.245 78.245 2;3 2.7767E-25 28147 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 172.17 124.08 98.667 133.91 386.6 342.72 76.301 345.33 93 129 371 325 83 325 3 4 6 6 2 5 86087 6747 1373 6494 15728;15729;15730;15731;15732;15733;15734 18177;18178;18179;18180;18181;18182;18183;18184;18185 18179 440 9 FVEGLPINDFSR Unmodified 1392.7038 0.70376498 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 76.129 76.129 2 1.1095E-184 26832 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 275.11 216.88 1116.9 1076.8 1093.4 1180 888.13 1481.3 1051 1097 1084 1147 903 1411 4 4 4 5 5 5 531000 6748 1373 6494 15735;15736;15737;15738;15739 18186;18187;18188;18189;18190;18191 18187 6 FVESDADEELLFNIPFTGNVK Unmodified 2383.1584 0.15835772 2471 Q8BWR2 Pithd1 PITH domain-containing protein 1 yes yes 0 0 0 0 7 0 1 96.093 96.093 3 0.00039444 35417 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.702 38.99 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 1209.8 6749 2471 6495 15740 18192 18192 1 FVEVMTEYNATQSK Unmodified 1645.7658 0.76577289 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 6.5 0.5 1 1 70.698 70.698 3 9.3374E-05 24242 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.837 56.861 59.808 55.551 0 0 0 0 56 56 0 0 0 0 1 1 0 0 0 0 6778.9 6750 1696 6496 15741;15742 18193;18194 18194 2 FVFDIFQFAK Unmodified 1260.6543 0.6542956 163 A0A0R4J1F6;A0A0R4J085;Q3UHZ7;Q91YN5 Uap1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase yes no 0 0 0 0 12 0 1 100.88 100.88 2 0.0035083 28592 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.263 46.039 16.02 14.88 0 0 15.69 0 15 15 0 0 15 0 1 1 0 0 1 0 1200.7 6751 163 6497 15743 18195 18195 1 FVFDRPLPVSR Unmodified 1331.735 0.73500553 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 1 10 0 1 61.339 61.339 3 0.00094619 16591 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.963 42.795 0 67.304 111.02 113.17 81.619 0 0 65 111 111 83 0 0 1 1 1 1 0 48482 6752 3313 6498 15744 18196 18196 1 FVFDVFQFAK Unmodified 1246.6386 0.63864553 1938 Q3TW96 Uap1l1 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 96.667 96.667 2;3 0.0019748 31564 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.435 41.643 20.3 19 14.646 8.9641 0 0 19 19 14 9 0 0 1 1 1 1 0 0 5156 6753 1938 6499 15745;15746 18197;18198 18197 2 FVFHNEQVYCPDCAK Unmodified 1912.8236 0.8236389 454 A2AEX8;A2AEX6;P97447 Fhl1 Four and a half LIM domains protein 1 yes no 0 0 0 0 7.5 0.5 1 1 58.431 58.431 3 2.7541E-05 17793 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.722 64.064 29.87 0 29.313 18.675 18.339 19.731 28 0 28 19 19 19 1 0 1 1 1 1 3214.9 6754 454 6500 15747;15748 18199;18200 18200 2 FVFSLVDAMNGK Unmodified 1326.6642 0.66420836 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 9 5.1 2 1 2 2 91.693 91.693 2;3 1.0071E-22 36093 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 166.97 124.58 317.36 294.68 395.52 424.13 319.52 362.89 298 300 396 412 326 347 4 7 6 6 4 6 144720 6755 1327 6501 15749;15750;15751;15752;15753;15754;15755 18201;18202;18203;18204;18205;18206;18207;18208;18209;18210;18211 18211 11 FVFSLVDAMNGK Oxidation (M);Deamidation (N) 1343.6431 0.64313856 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 1 1 0 10.3 1.15 2 4 2 1 83.557 83.557 2;3 4.5293E-05 26221 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.596 62.064 178.56 129.26 107.05 178.02 84.768 167.17 167 129 103 169 84 159 4 4 3 6 2 5 26138 6756 1327 6501 15756;15757;15758;15759;15760;15761;15762;15763;15764 18212;18213;18214;18215;18216;18217;18218;18219;18220 18215 399 68 9 FVFSLVDAMNGK Deamidation (N) 1327.6482 0.64822394 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 1 0 0 11 1.38 3 5 4 3 4 92.143 92.143 2;3 2.2434E-25 30583 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 173.64 142.22 595.48 437.61 672.78 271.34 356.27 360.9 558 444 644 264 354 345 12 13 13 9 9 7 257250 6757 1327 6501 15765;15766;15767;15768;15769;15770;15771;15772;15773;15774;15775;15776;15777;15778;15779;15780;15781;15782;15783 18221;18222;18223;18224;18225;18226;18227;18228;18229;18230;18231;18232;18233;18234;18235;18236;18237;18238;18239;18240;18241;18242;18243;18244 18229 399 24 FVFSLVDAMNGK Oxidation (M) 1342.6591 0.65912298 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 1 0 11.7 1.25 1 1 1 82.28 82.28 3 0.00035777 27018 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.865 59.779 89.624 65.13 70.01 28.094 141.14 86.352 84 65 66 28 139 84 2 1 2 1 3 2 11744 6758 1327 6501 15784;15785;15786 18245;18246;18247 18247 68 3 FVFSLVDAMNGKEGVVECSFVQSK Unmodified 2676.2928 0.29275949 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 1 9 0 1 90.454 90.454 4 0.014356 31976 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.37 20.441 0 0 0 19.674 0 39.442 0 0 0 18 0 37 0 0 0 1 0 1 1499.8 6759 1327 6502 15787 18248 18248 1 FVFTPHMEAECLSESTALQK Unmodified 2324.0817 0.081704079 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7 0 1 72.33 72.33 4 0.047418 25020 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 28.635 11.557 0 0 49.772 0 0 39.442 0 0 46 0 0 37 0 0 1 0 0 1 2460.9 6760 1412 6503 15788 18249 18249 1 FVGSLGTIIIK Unmodified 1146.7012 0.70124579 3393 Q9Z2D0 Mtmr9 Myotubularin-related protein 9 yes yes 0 0 0 0 11.5 0.5 1 1 80.873 80.873 3 0.0034393 25001 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.532 28.184 0 29.792 28 28.819 94.908 0 0 28 28 28 92 0 0 1 1 1 1 0 6909 6761 3393 6504 15789;15790 18250;18251 18250 2 FVIFPIQYPDIWR Unmodified 1692.9028 0.90279914 694 D3YVM0;D6RFP5;Q6PEE3 Rrm2b Ribonucleoside-diphosphate reductase subunit M2 B yes no 0 0 0 0 12 0 1 100.39 100.39 2 0.00050674 28510 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.355 58.026 0 15.922 2.2907 0 0 0 0 15 3 0 0 0 0 1 1 0 0 0 773.87 6762 694 6505 15791 18252 18252 1 FVIKPIDK Unmodified 958.58515 0.5851534 1451;1452;1453 P26043;Q7TSG6;P26041;P26040 Rdx;Msn;Ezr Radixin;Moesin;Ezrin no no 0 0 0 1 11.5 0.5 1 1 60.566 60.566 3 0.0072757 15796 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.062 48.816 1336.6 1340.1 1451.5 339.59 0 461.58 1260 1367 1436 330 0 433 2 2 2 1 0 1 100220 6763 1453;1452;1451 6506 15792;15793 18253;18254 18253 2 FVINYDYPNSSEDYIHR Deamidation (N) 2131.9487 0.9486993 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 1 0 0 6 0 1 66.353 66.353 3 0.0025028 23049 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.079 39.98 29.577 36.581 47.428 0 0 0 28 37 46 0 0 0 1 1 1 0 0 0 3897.7 6764 2135 6507 15794 18255 18255 835 1 FVINYDYPNSSEDYIHR Unmodified 2130.9647 0.96468371 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 7 0 1 66.439 66.439 3 0.0001112 22263 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.94 43.363 19.974 37.391 37.69 0 29.288 0 19 37 37 0 28 0 1 1 1 0 1 0 4092.4 6765 2135 6507 15795 18256 18256 1 FVIPDFMSFTSHIDELYESAK Unmodified 2475.1668 0.16681392 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 101.49 101.49 4 0.035845 36021 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 29.892 18.581 30.044 0 0 35.819 13.27 49.723 28 0 0 33 14 47 1 0 0 2 1 2 2738.6 6766 789 6508 15796;15797 18257;18258 18258 2 FVIQGAGSK Unmodified 905.49707 0.49706667 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 10 0 1 55.35 55.35 2 0.016682 13912 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.016 34.896 19.924 37.252 46.234 26.985 45.896 28.538 19 37 46 28 46 28 1 1 1 1 1 1 2857.4 6767 828 6509 15798 18259 18259 1 FVLHAVQLVK Unmodified 1152.7019 0.70191449 2178 Q64514;A0A087WRC0;A0A087WP19 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 4.67 5.19 2 1 72.696 72.696 3 7.5121E-06 23368 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.07 80.157 73.523 19 133.09 137.34 63.287 47.23 69 19 129 134 65 46 1 1 2 2 1 1 23749 6768 2178 6510 15799;15800;15801 18260;18261;18262 18260 3 FVLINWTGEGVNDVR Unmodified 1717.8788 0.87876924 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 10 0.816 1 1 1 83.883 83.883 3 2.7628E-05 29009 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.834 53.404 60.988 28 29.152 83.959 34.6 68.303 57 28 28 79 37 65 2 1 1 2 1 2 33106 6769 2154 6511 15802;15803;15804 18263;18264;18265 18263 3 FVLITDILDTFGK Unmodified 1480.8177 0.81773211 699 D3YW20;D3YW19;I1E4X5;Q8BWQ6 9030624J02Rik UPF0505 protein C16orf62 homolog yes no 0 0 0 0 11 0 1 112.92 112.92 3 0.020449 36278 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.789 29.385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6770 699 6512 15805 18266 18266 1 FVLPVSGPVPWGTEVPGVIR Unmodified 2105.1673 0.16734668 417 A0ZV96;Q8BHW2 Oscp1 Protein OSCP1 yes no 0 0 0 0 10.5 0.5 1 1 93.709 93.709 2;3 0.017605 30237 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.218 17.231 19 0 0 9 0 0 19 0 0 9 0 0 1 0 0 1 0 0 6279.4 6771 417 6513 15806;15807 18267;18268 18268 2 FVLSGANIMCPGLTSPGAK Unmodified 1918.9645 0.96448948 3111 Q9DB27;Q9CQ21 Mcts1;Mcts2 Malignant T-cell-amplified sequence 1;Malignant T-cell-amplified sequence 2 yes no 0 0 0 0 6.5 5.5 1 1 79.828 79.828 3 1.2586E-05 21610 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.249 52.481 39.701 0 0 0 46.477 47.71 37 0 0 0 46 46 1 0 0 0 1 1 7181.8 6772 3111 6514 15808;15809 18269;18270 18270 2 FVLSSGK Unmodified 736.41194 0.41194006 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 11 0.816 1 1 1 56.525 56.525 2 0.0091343 14081 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 124.89 71.421 1627.1 1422.6 564.7 61.208 637.85 536.57 1525 1449 550 56 625 516 3 4 2 1 2 2 343850 6773 1375 6515 15810;15811;15812 18271;18272;18273;18274 18272 4 FVMKPPQVVR Unmodified 1199.6849 0.68488422 2855 Q99L45 Eif2s2 Eukaryotic translation initiation factor 2 subunit 2 yes yes 0 0 0 1 12 0 1 56.508 56.508 3 0.0052012 12831 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.846 53.256 0 47.653 77.209 0 97.278 0 0 46 74 0 93 0 0 1 1 0 1 0 6232.1 6774 2855 6516 15813 18275 18275 1 FVMQEEFSR Unmodified 1171.5332 0.53319418 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 10 3 1 1 61.76 61.76 2 0.028403 21831 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.518 39.218 118.49 54.248 57.82 57.762 162.39 132.88 111 56 56 56 158 129 2 1 1 1 1 2 16644 6775 1470 6517 15814;15815 18276;18277 18277 2 FVNLFPEVK Unmodified 1091.6015 0.60153174 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 11 1.41 1 1 1 1 1 80.915 80.915 2;3 0.00077601 25630 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.52 46.568 386.27 345.35 300.58 312.24 485.29 315.39 363 353 301 305 486 303 4 4 3 3 5 2 124930 6776 1401 6518 15816;15817;15818;15819;15820 18278;18279;18280;18281;18282;18283;18284 18280 7 FVNLGIEPPK Unmodified 1112.623 0.62299547 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 9 0 1 71.992 71.992 2 0.0071304 23598 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.507 36.849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6777 1555 6519 15821 18285 18285 1 FVNNLFVQLSK Deamidation (N) 1308.7078 0.70778773 857 E9PYT0;P97393 Arhgap5 Rho GTPase-activating protein 5 yes no 0 1 0 0 12 0 1 83.82 83.82 3 0.042263 23237 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 46.592 14.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6778 857 6520 15822 18286 18286 229 1 FVNPWPTWK Unmodified 1173.5971 0.59711507 2400 Q8BH82 Napepld N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D yes yes 0 0 0 0 12 0 1 79.21 79.21 3 0.0031148 21387 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.735 43.959 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 4925.4 6779 2400 6521 15823 18287 18287 1 FVNVVPTFGK Unmodified 1106.6124 0.61243078 1748 Q642K5;P62862 Fau 40S ribosomal protein S30 yes no 0 0 0 0 11.5 1.12 1 1 1 1 75.078 75.078 2;3 5.7899E-05 19802 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.66 79.409 135.13 180.53 104.83 113.4 332.26 133.28 127 176 102 109 327 128 3 3 2 2 4 2 52732 6780 1748 6522 15824;15825;15826;15827 18288;18289;18290;18291 18290 4 FVNWQVDGEYR Unmodified 1411.6521 0.65206377 3272 Q9QYA2 Tomm40 Mitochondrial import receptor subunit TOM40 homolog yes yes 0 0 0 0 8 0 1 67.46 67.46 2 0.0059637 22116 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.944 44.987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6781 3272 6523 15828 18292 18292 1 FVPFAAVAAANCINIPLMR Oxidation (M) 2090.0805 0.080522288 2730;2832 Q91V61;Q3U4F0;Q99JR1 Sfxn3;Sfxn1 Sideroflexin-3;Sideroflexin-1 no no 0 0 1 0 1 0 1 90.486 90.486 3 7.1789E-07 32204 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.018 57.766 0 0 6.2718 4.9434 7.8557 8.3038 0 0 6 5 8 8 0 0 1 1 1 1 4210 6782 2730;2832 6524 15829 18293 18293 181 1 FVPFAAVAAANCINIPLMR Unmodified 2074.0856 0.085607665 2730;2832 Q91V61;Q3U4F0;Q99JR1 Sfxn3;Sfxn1 Sideroflexin-3;Sideroflexin-1 no no 0 0 0 0 1 0 2 98.001 98.001 3 2.9498E-54 33498 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 168.67 151.18 3.219 2.0215 11.371 0 12.344 11.374 3 2 11 0 12 11 1 1 2 0 1 2 6956.7 6783 2730;2832 6524 15830;15831 18294;18295;18296 18294 3 FVPFAAVAAANCINIPLMR Deamidation (N) 2075.0696 0.06962325 2730;2832 Q91V61;Q3U4F0;Q99JR1 Sfxn3;Sfxn1 Sideroflexin-3;Sideroflexin-1 no no 0 1 0 0 11 0 1 96.211 96.211 3 0.00079874 31428 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.874 40.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2335.5 6784 2730;2832 6524 15832 18297 18297 980 1 FVPFPAVASANICNVVLMR Unmodified 2104.0962 0.096172352 2450 Q925N0;Q8BRQ9 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 1 0 4 94.847 94.847 3 1.9666E-36 32943 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 151.18 121.14 17.113 4.5257 5.3993 11.97 2.8392 5.33 16 5 5 11 3 5 4 2 1 2 1 1 7985.4 6785 2450 6525 15833;15834;15835;15836 18298;18299;18300;18301;18302;18303;18304 18298 7 FVPFPAVASANICNVVLMR Oxidation (M) 2120.0911 0.091086974 2450 Q925N0;Q8BRQ9 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 1 0 12 0 1 89.445 89.445 3 0.015374 25505 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.014 29.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2425 6786 2450 6525 15837 18305 18305 174 1 FVPPALEK Unmodified 899.51165 0.5116541 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 0 8 0 1 65.827 65.827 3 0.0098819 21252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.486 31.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5082.4 6787 2617 6526 15838 18306 18306 1 FVPSNPVGILTTSYCELLQNK Unmodified 2379.2144 0.21443281 2205 Q6NVE9 Pptc7 Protein phosphatase PTC7 homolog yes yes 0 0 0 0 11 0.816 1 1 1 99.831 99.831 3;4 4.6857E-11 32592 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.737 68.659 15.905 16.868 21.93 0 26.552 0 15 17 21 0 26 0 2 2 2 0 2 0 4588.9 6788 2205 6527 15839;15840;15841 18307;18308;18309;18310;18311 18308 5 FVPSQDTEAGSDMGPGGSFEPEPLGSPLDVR Unmodified 3174.4452 0.44517362 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 4 0 2 81.992 81.992 3;4 0.002396 30966 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 29.617 22.257 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 2558.7 6789 2438 6528 15842;15843 18312;18313 18313 2 FVPYSYFSR Unmodified 1164.5604 0.56039521 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 0 0 0 12 0 1 70.554 70.554 2 0.0028057 17944 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.374 69.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5301.9 6790 1910 6529 15844 18314 18314 1 FVPYYDLFMPSLK Unmodified 1618.8105 0.81053824 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 96.324 96.324 3 0.001611 31483 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.802 24.598 0 51.386 44.847 65.093 28.291 41.833 0 49 46 62 28 40 0 2 1 2 1 2 12705 6791 2422 6530 15845;15846;15847;15848 18315;18316;18317;18318 18316 4 FVQWQSSI Unmodified 993.49198 0.4919813 3058 Q9D3A9;A0A0U1RPU8 Ttyh1 Protein tweety homolog 1 yes no 0 0 0 0 9.5 0.5 1 1 80.148 80.148 2 0.012043 27388 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.986 70.704 29.856 57.571 0 20.767 0 59.696 28 56 0 19 0 56 1 2 0 1 0 2 14882 6792 3058 6531 15849;15850 18319;18320 18319 2 FVSDDSICVLGICK Unmodified 1611.7637 0.7636644 2507 Q8C605;Q9WUA3;F6YL81 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 9.33 2.62 1 1 1 79.905 79.905 2;3 1.741E-07 27993 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.39 86.002 108.46 73.656 102.62 38.171 67.002 107.66 102 74 101 37 65 102 3 2 3 1 2 2 22837 6793 2507 6532 15851;15852;15853 18321;18322;18323 18322 3 FVSEAELDER Unmodified 1193.5564 0.55643205 277 A0A1D5RLW0;A0A1D5RLU2;Q91WE2;A0A1D5RM30;A0A1D5RLD7;A0A1D5RLT4;A0A1D5RLJ3;A0A1D5RLF2;A0A1D5RLI3;A0A1D5RLY1;A0A1D5RLX7 Fam192a Protein FAM192A yes no 0 0 0 0 3 0 1 55.863 55.863 2 0.0031902 19430 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.645 53.948 9.657 0 0 30.604 0 29.848 9 0 0 28 0 28 1 0 0 1 0 1 1841.2 6794 277 6533 15854 18324 18324 1 FVSEDDRNTFTLK Unmodified 1570.7627 0.76273643 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 8.67 3.09 1 1 1 60.883 60.883 3 0.00015964 20562 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.464 57.953 246.94 296.52 297.21 246.79 176.8 357.39 233 299 298 236 176 340 2 3 2 2 2 3 54658 6795 1957 6534 15855;15856;15857 18325;18326;18327 18325 3 FVSELWK Unmodified 907.48035 0.48035398 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 10 0 1 73.824 73.824 2 0.049285 22284 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.415 4.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6796 2696 6535 15858 18328 18328 1 FVSEMLQK Unmodified 980.5001 0.50010314 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 11.5 1.5 1 1 68.476 68.476 2 0.037572 25019 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.88 35.31 129.63 40.203 0 0 65.015 86.623 121 46 0 0 65 83 1 1 0 0 1 1 11735 6797 3307 6536 15859;15860 18329;18330 18330 2 FVSILMESIPLPDR Unmodified 1615.8644 0.86436473 1440 Q543K9;P23492 Pnp Purine nucleoside phosphorylase yes no 0 0 0 0 10.3 0.471 2 1 98.997 98.997 2;3 3.4386E-05 32391 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.22 74.486 9.4252 28.915 23.448 0 15.69 0 9 28 24 0 15 0 1 1 2 0 1 0 7479.3 6798 1440 6537 15861;15862;15863 18331;18332;18333;18334 18332 4 FVSISDLFVPK Unmodified 1250.6911 0.69107503 2132 Q61598;A0A1Y7VLG4 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 10 4.16 1 1 1 1 2 89.832 89.832 2;3 1.5545E-10 29109 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.43 95.077 276.51 174.76 277.39 295.57 369.4 202.04 272 171 274 288 366 195 3 4 5 6 7 4 295950 6799 2132 6538 15864;15865;15866;15867;15868;15869 18335;18336;18337;18338;18339;18340;18341;18342;18343;18344;18345 18336 11 FVSPIYFTDCNLR Unmodified 1630.7814 0.78136338 862 E9PZ88;F8WIE1;Q91W89;E9PYM7;E0CZB0;E0CXM6;E0CXI0;E0CYW2 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 0 10 0 1 78.708 78.708 3 0.025156 24378 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.315 20.921 39.474 29.792 38.135 88.446 0 118.33 37 28 37 83 0 111 1 1 1 2 0 2 3623.9 6800 862 6539 15870 18346;18347 18346 2 FVSPLTLVADEGWFIAESR Unmodified 2136.0892 0.089155943 2380 Q8BGN3;D3YU63;F6R291 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 0 0 0 8.5 0.5 1 1 106.3 106.3 3 3.0016E-10 36640 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.74 91.438 4.292 0 5 6.558 0 11.264 4 0 5 6 0 11 1 0 1 1 0 2 2048.3 6801 2380 6540 15871;15872 18348;18349;18350 18348 3 FVSQTNGNLYIANVESSDR Deamidation (N) 2113.9916 0.99162674 1362 P12960 Cntn1 Contactin-1 yes yes 0 1 0 0 9 4 1 1 70.173 70.173 3 9.8532E-10 26043 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.44 97.017 79.002 56.275 19.598 18.161 18.362 98.614 74 56 19 18 19 93 2 1 1 1 1 2 19887 6802 1362 6541 15873;15874 18351;18352 18352 432 2 FVSSPEEILDVIDEGK Unmodified 1775.8829 0.88291114 1507 P33175 Kif5a Kinesin heavy chain isoform 5A yes yes 0 0 0 0 13 0 1 94.051 94.051 3 0.0064497 37607 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.338 23.973 20.149 0 39.932 0 0 0 19 0 37 0 0 0 1 0 1 0 0 0 2097.6 6803 1507 6542 15875 18353 18353 1 FVSSPEEVMDVIDEGK Unmodified 1779.8237 0.8236817 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 4.5 0.5 1 1 86.741 86.741 3 2.1583E-05 33198 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.993 70.557 33.111 10.568 16.614 9.837 11.041 33.797 31 11 16 9 11 32 2 1 1 1 1 2 4984.7 6804 1481 6543 15876;15877 18354;18355 18355 2 FVTDQSACAGSPSLVAAAR Unmodified 1906.9207 0.92071041 25 A0A087WQF0;Q8VCY8 Lppr2 Lipid phosphate phosphatase-related protein type 2 yes no 0 0 0 0 6.5 0.5 1 1 61.325 61.325 3 1.9144E-06 19914 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.765 46.521 49.358 0 0 0 0 59.696 46 0 0 0 0 56 1 0 0 0 0 1 2925.2 6805 25 6544 15878;15879 18356;18357 18357 2 FVTILEGVLAK Unmodified 1188.7118 0.71181048 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 11.7 0.471 1 2 96.128 96.128 2;3 1.8479E-05 27514 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.22 70.671 30.044 19.983 13.949 43.554 8.8191 0 28 19 14 40 9 0 2 1 1 2 1 0 11608 6806 2301 6545 15880;15881;15882 18358;18359;18360;18361 18360 4 FVTISGQK Unmodified 878.48617 0.48616764 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 10 0 1 56.094 56.094 2 0.0052258 14267 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.28 64.923 0 58.273 78.411 80.16 80.506 76.587 0 56 79 79 83 74 0 1 1 1 1 1 7073.3 6807 581 6546 15883 18362 18362 1 FVTLSATNAK Unmodified 1050.571 0.5709599 2767 Q91XU0 Wrnip1 ATPase WRNIP1 yes yes 0 0 0 0 10 0 1 59.658 59.658 2 0.022422 15909 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.067 22.511 29.85 38.419 0 40.441 0 29.848 28 38 0 37 0 28 1 1 0 1 0 1 1779.4 6808 2767 6547 15884 18363 18363 1 FVTNTTK Unmodified 809.42832 0.42831841 1973 Q3UGR5;D3YUN7;D3YZI3 Hdhd2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes no 0 0 0 0 9 0.707 1 2 1 46.027 46.027 2;3 0.017956 11264 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.86 58.897 439.09 276.37 262.04 384.57 282.5 221.1 417 287 269 371 287 213 4 3 2 3 2 1 45629 6809 1973 6548 15885;15886;15887;15888 18364;18365;18366;18367 18365 4 FVTSCSRPPLLGFK Unmodified 1607.8494 0.84938336 2316 Q80U95 Ube3c Ubiquitin-protein ligase E3C yes yes 0 0 0 1 1 0 1 68.14 68.14 4 0.043158 23060 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 38.366 14.379 0 29.337 27.245 28.98 0 49.036 0 28 28 28 0 46 0 1 1 1 0 1 875.8 6810 2316 6549 15889 18368 18368 1 FVTTEFEPCFDAADFIR Unmodified 2063.9299 0.92987811 3098 Q9D964 Gatm Glycine amidinotransferase, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 90.548 90.548 3 0.0026823 34271 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.701 31.066 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6811 3098 6550 15890;15891 18369;18370 18369 2 FVTVGWGSK Unmodified 979.51272 0.51271674 2296 Q7TT37 Ikbkap Elongator complex protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 68.41 68.41 2 0.013005 17238 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.614 42.141 133.76 72.032 0 101.65 51.529 52.896 125 74 0 93 51 51 2 1 0 1 1 1 13582 6812 2296 6551 15892;15893 18371;18372 18372 2 FVTVQTISGTGALR Unmodified 1448.7987 0.798728 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 9.62 3.46 1 1 2 2 1 1 66.955 66.955 2;3 1.0773E-57 18528 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 205.12 152.54 814.78 852.51 1090.7 326.51 716.31 704.68 765 859 1067 324 713 676 7 10 9 4 7 7 1037400 6813 1312 6552 15894;15895;15896;15897;15898;15899;15900;15901 18373;18374;18375;18376;18377;18378;18379;18380;18381;18382;18383;18384;18385;18386 18382 14 FVVDLSDQVAPTDIEEGMR Unmodified 2120.0096 0.0095849934 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 5 0 1 82.666 82.666 3 0.010756 31424 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.923 27.135 0 20.216 0 30.604 0 39.442 0 19 0 28 0 37 0 1 0 1 0 1 2003.6 6814 1555 6553 15902 18387 18387 1 FVVGYALDYNEYFR Unmodified 1754.8304 0.83042206 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 9.5 0.5 1 1 87.102 87.102 3 0.00031131 28034 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.171 45.973 9.612 8.9279 20.558 9.6683 8.9699 39.442 9 9 19 9 9 37 1 1 1 1 1 1 4686.9 6815 1295 6554 15903;15904 18388;18389 18389 2 FVVPKPR Unmodified 841.51741 0.51740818 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 1 1 0 1 49.768 49.768 3 0.016079 14809 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.919 68.63 687.52 236.78 565.75 577.82 261.02 307.02 645 275 563 564 285 295 2 2 2 2 2 2 48022 6816 2715 6555 15905 18390;18391 18390 2 FVVQNVSAQK Unmodified 1118.6084 0.60840804 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 10.7 1.7 1 1 1 55.384 55.384 2;3 9.2383E-06 15741 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 131.5 74.326 192.83 99.415 148.23 122.33 67.99 207.87 181 102 148 120 65 195 3 1 1 1 1 2 36512 6817 2137 6556 15906;15907;15908 18392;18393;18394 18392 3 FVVTDGGITR Unmodified 1063.5662 0.56620887 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 8 0 1 57.415 57.415 2 8.5688E-05 17388 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.36 65.597 0 148.47 156.64 169.91 232.97 207.62 0 142 160 168 237 201 0 1 1 1 1 1 13661 6818 882 6557 15909 18395 18395 1 FWAGLTPVLHAK Unmodified 1338.7448 0.74484194 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 5.86 5.62 4 2 1 78.569 78.569 3;4 4.9431E-09 19174 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.86 85.886 297.04 125.53 121.12 143.86 156.49 280.61 280 130 120 139 158 269 6 2 3 4 3 5 46035 6819 547 6558 15910;15911;15912;15913;15914;15915;15916 18396;18397;18398;18399;18400;18401;18402;18403;18404 18401 9 FWDASAITLQVLYK Unmodified 1653.8766 0.87664397 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 0 11 0 1 96.339 96.339 3 2.8493E-05 31395 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.964 59.889 29.812 0 39.062 18.439 0 0 28 0 37 19 0 0 1 0 1 1 0 0 1883.5 6820 738 6559 15917 18405 18405 1 FWDASAMTLQMLYK Unmodified 1703.8051 0.80513529 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 11 0 1 95.956 95.956 3 9.1122E-05 31247 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.548 52.715 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2635.3 6821 2041 6560 15918 18406 18406 1 FWDASGVALRPLYK Unmodified 1621.8617 0.86166261 185 A0A0R4J0S4;Q80Y17 Llgl1 Lethal(2) giant larvae protein homolog 1 yes no 0 0 0 1 11.5 0.5 1 1 75.478 75.478 3 0.00027368 19958 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.271 65.531 99.522 52.873 0 118.69 139.94 69.29 93 56 0 111 139 65 1 1 0 1 1 1 19579 6822 185 6561 15919;15920 18407;18408 18408 2 FWEVISDEHGIDPSGNYVGDSDLQLER Unmodified 3076.405 0.40502337 3183 Q9ERD7;A0A1D5RM76 Tubb3 Tubulin beta-3 chain yes no 0 0 0 0 5.12 1.05 3 2 2 1 83.01 83.01 3;4;5 2.5393E-23 31400 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.197 83.314 118.36 68.208 48.396 160.37 109.32 166.37 112 66 47 151 112 159 5 3 2 5 4 6 106730 6823 3183 6562 15921;15922;15923;15924;15925;15926;15927;15928 18409;18410;18411;18412;18413;18414;18415;18416;18417;18418 18412 10 FWEVISDEHGIDPTGSYHGDSDLQLER Unmodified 3101.4003 0.40027234 2283;2975 Q7TMM9;Q9CWF2 Tubb2a;Tubb2b Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 5.2 0.748 1 2 2 73.771 73.771 4;5 8.4405E-35 27983 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 126.47 61.4 326.39 157.92 436.59 186.86 327.33 326.45 306 157 417 186 324 315 5 3 6 3 5 6 287130 6824 2283;2975 6563 15929;15930;15931;15932;15933 18419;18420;18421;18422;18423;18424;18425;18426 18422 8 FWEVISDEHGIDPTGTYHGDSDLQLDR Unmodified 3101.4003 0.40027234 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 0 0 5.5 1.12 1 1 1 1 76.66 76.66 4 3.811E-30 28574 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.79 55.105 287.6 92.149 167.08 193.29 225.36 115.39 269 93 166 186 223 111 4 2 4 5 4 3 106610 6825 1863 6564 15934;15935;15936;15937 18427;18428;18429;18430;18431;18432 18429 6 FWEVISDEHGIDPTGTYHGDSDLQLER Unmodified 3115.4159 0.4159224 1795;3072 P68372;Q9D6F9 Tubb4b;Tubb4a Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 6.5 2.78 2 2 1 1 1 1 76.061 76.061 4;5 4.054E-30 28202 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.71 111.55 495.75 252.01 407.89 203.58 305.66 534.94 467 260 392 195 306 510 14 8 12 5 6 13 259110 6826 1795;3072 6565 15938;15939;15940;15941;15942;15943;15944;15945 18433;18434;18435;18436;18437;18438;18439;18440;18441;18442;18443;18444;18445;18446;18447;18448;18449;18450;18451;18452 18442 20 FWLAVEDLK Unmodified 1119.5964 0.59644637 2333 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 10 0 2 88.362 88.362 2;3 0.020057 28618 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.418 30.687 49.176 36.052 29.481 69.536 44.922 0 46 37 28 66 46 0 1 1 1 2 2 0 4794.8 6827 2333 6566 15946;15947 18453;18454 18454 2 FWLAVEDLKR Unmodified 1275.6976 0.69755739 2333 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 1 11 0 1 77.541 77.541 3 0.003354 23436 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.365 48.514 111 0 0 0 0 0 111 0 0 0 0 0 1 0 0 0 0 0 16587 6828 2333 6567 15948 18455 18455 1 FWLIDCR Unmodified 1008.4851 0.48512178 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 10.5 0.5 1 1 75.842 75.842 2 0.014951 22542 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.85 48.169 127.69 0 180.05 0 504.94 0 120 0 167 0 495 0 1 0 1 0 2 0 71560 6829 3449;3451 6568 15949;15950 18456;18457 18457 2 FWLSVQDLK Unmodified 1134.6073 0.6073454 11 A0A087WSJ9;A0A087WSH2;A0A087WPW1;F6WDS8;A0A087WQG6;A0A087WNZ9;A0A087WRP8;A0A087WPC4;A0A087WPD1;Q9Z2H2;A0A0J9YTS6 Rgs6 Regulator of G-protein signaling 6 yes no 0 0 0 0 11.5 0.5 1 1 83.531 83.531 2 0.0006489 26076 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.12 53.437 51.069 40.597 38.701 42.339 0 9.594 48 42 40 40 0 9 2 2 2 1 0 1 8226.1 6830 11 6569 15951;15952 18458;18459 18458 2 FWNAAFFDAVHCER Unmodified 1768.778 0.77800934 2630 Q8R0A7;Q3TA40 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 11.3 1.25 1 1 1 75.074 75.074 3 1.8341E-11 22713 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.31 102.95 138.88 101.74 144.31 114.95 157.33 46.937 130 102 139 111 157 46 2 2 2 2 2 1 25101 6831 2630 6570 15953;15954;15955 18460;18461;18462 18460 3 FWNQLDK Unmodified 949.46577 0.46576654 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.5 0.5 1 1 66.91 66.91 3 0.018792 21123 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.258 18.434 0 29.187 36.17 47.435 36.523 0 0 28 37 46 37 0 0 1 1 1 1 0 12795 6832 2295 6571 15956;15957 18463;18464 18464 2 FWQDLMNIAGTTLSSK Unmodified 1810.8924 0.89237039 1823 P80314;A0A1W2P7B7 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 12 0.816 1 1 1 104.81 104.81 3 1.2853E-07 29173 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.63 88.311 55.623 11.589 38.951 41.399 45.665 70.157 52 12 38 40 44 66 4 1 2 3 2 3 13097 6833 1823 6572 15958;15959;15960 18465;18466;18467;18468;18469 18467 5 FWVNMIK Unmodified 936.48914 0.48914452 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 1 0 1 80.35 80.35 2 0.023216 27932 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.29 47.891 39.701 0 0 34.578 21.136 38.839 37 0 0 32 23 37 1 0 0 1 1 1 1868.7 6834 2317 6573 15961 18470 18470 1 FYAGGSER Unmodified 885.39808 0.39808091 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6.5 0.5 1 1 39.56 39.56 2 0.0077098 9655 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.75 76.64 88.26 138.38 213.37 187.42 109.99 66.152 83 139 213 185 111 65 1 2 2 2 1 1 16506 6835 3000 6574 15962;15963 18471;18472 18472 2 FYALSAK Unmodified 798.42759 0.42759012 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 11.5 1.12 1 1 1 1 60.388 60.388 2;3 0.0053384 16299 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.44 83.539 1039.4 1028.5 1385.8 1182.4 1197.5 1197.6 979 1048 1368 1178 1219 1152 4 4 4 5 4 3 270490 6836 1375 6575 15964;15965;15966;15967 18473;18474;18475;18476;18477;18478 18474 6 FYAYNPLAGGLLTGK Unmodified 1583.8348 0.83477916 2534 Q8CG76 Akr7a2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 0 4.67 5.19 2 1 87.041 87.041 3 1.3665E-11 30665 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 121.45 90.451 89.315 195.1 209.68 114.72 357.75 116.72 84 192 206 117 350 112 3 6 4 3 8 4 71948 6837 2534 6576 15968;15969;15970 18479;18480;18481;18482;18483;18484;18485;18486;18487 18479 9 FYDANYDGKEYDPVEAR Unmodified 2050.8909 0.89085007 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 1 5 0 1 60.354 60.354 3 0.001704 20929 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.193 40.709 39.349 0 59.21 26.566 27.069 29.076 37 0 56 28 28 28 1 0 1 1 1 1 5030.2 6838 722 6577 15971 18488 18488 1 FYDSNTVK Unmodified 972.45526 0.45526144 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 0 7 0 1 51.835 51.835 2 0.037463 15329 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.735 37.362 0 59.584 0 0 58.576 0 0 56 0 0 56 0 0 1 0 0 1 0 2843 6839 2556 6578 15972 18489 18489 1 FYEAELEELDFQGATEESR Unmodified 2261.9964 0.99643735 2090 Q60854;K7E6F1;F8WIV2;E9Q3Y1;E9Q6X2;E9Q108;E9Q0P9 Serpinb6;Serpinb6a Serpin B6 yes no 0 0 0 0 4 0.816 1 1 1 81.734 81.734 3 2.8443E-08 30646 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.89 88.125 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 8116.7 6840 2090 6579 15973;15974;15975 18490;18491;18492;18493 18490 4 FYEAFSK Unmodified 890.41742 0.41741937 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 10 1.87 1 1 1 1 64.713 64.713 2;3 0.015517 20851 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.344 44.346 536.76 595.94 629.62 521.6 346.78 906.86 506 604 636 515 354 860 3 4 4 4 2 5 107150 6841 1354 6580 15976;15977;15978;15979 18494;18495;18496;18497;18498 18494 5 FYEEVHDLER Unmodified 1335.6095 0.60953025 637;833 B7ZNL2;Q78ZA7;A0A140LJB5;Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l4;Nap1l1 Nucleosome assembly protein 1-like 4;Nucleosome assembly protein 1-like 1 no no 0 0 0 0 8 5 1 1 56.063 56.063 3 8.1814E-06 19792 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.23 97.332 143.41 29.097 37.965 58.382 202.08 98.702 134 32 37 56 199 98 2 1 1 1 2 2 30107 6842 637;833 6581 15980;15981 18499;18500 18499 2 FYEGTADEMYK Unmodified 1352.5595 0.55946851 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8;D3YWI0 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 5 0 1 62.407 62.407 3 0.0012863 21823 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.408 48.377 0 0 48.577 26.827 46.884 0 0 0 46 28 46 0 0 0 1 1 1 0 2735 6843 158 6582 15982 18501 18501 1 FYEQFSK Unmodified 947.43888 0.43888309 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10.3 2.05 1 1 1 60.545 60.545 2;3 0.00621 19060 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.08 84.51 526.33 506.14 378.46 548.58 753.48 595.79 495 515 384 530 764 577 4 4 3 3 4 3 96999 6844 1322 6583 15983;15984;15985 18502;18503;18504;18505 18503 4 FYFENALSK Unmodified 1117.5444 0.5444108 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;F6RWZ9;E9PXV3 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 10.5 0.5 1 1 73.14 73.14 2;3 0.00065895 22015 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.906 63.791 93.511 65.474 97.92 83.426 135.59 52.114 88 69 98 84 135 51 2 2 2 2 2 1 13889 6845 103 6584 15986;15987 18506;18507 18506 2 FYFENLLAK Unmodified 1143.5964 0.59644637 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 11.3 1.49 1 1 1 1 2 84.922 84.922 2;3 3.1073E-05 26784 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 141.47 93.559 1043 443.96 571.69 588.59 382.66 919.8 976 455 564 566 389 869 7 5 6 6 4 4 516010 6846 1475 6585 15988;15989;15990;15991;15992;15993 18508;18509;18510;18511;18512;18513;18514;18515;18516;18517 18512 10 FYFENLLSK Unmodified 1159.5914 0.59136099 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YCH4 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 11.2 1.17 2 1 1 1 84.596 84.596 2;3 0.0008758 26919 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.75 69.466 88.268 133.61 117.18 173.51 36.688 114.65 83 129 121 166 37 112 2 2 2 3 1 2 80209 6847 2818 6586 15994;15995;15996;15997;15998 18518;18519;18520;18521;18522;18523 18518 6 FYFENLWSR Unmodified 1260.5928 0.59275797 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 10 3.78 1 1 2 2 1 83.143 83.143 2;3 2.9891E-05 23119 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 143.03 102.68 3211.1 3236.2 4073.5 2851.9 2579.3 4083.9 3026 3309 4074 2866 2722 3893 5 8 7 6 7 6 1741100 6848 1355 6587 15999;16000;16001;16002;16003;16004;16005 18524;18525;18526;18527;18528;18529;18530;18531;18532;18533;18534 18532 11 FYFQCEGHEPTLLLIK Unmodified 1993.9972 0.99716981 2006 Q3UUG6;A0A0J9YUB2 Tbc1d24 TBC1 domain family member 24 yes no 0 0 0 0 8 0 1 79.48 79.48 3 0.024333 27786 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.177 16.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6849 2006 6588 16006 18535 18535 1 FYFVGDEDLLEIIGNSK Unmodified 1957.9673 0.96730947 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 101.18 101.18 3 9.1199E-09 35791 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.5 87.179 0 0 0 7.5272 6.58 11.538 0 0 0 7 7 11 0 0 0 1 1 1 5231.3 6850 3204 6589 16007;16008;16009;16010 18536;18537;18538;18539 18537 4 FYGAEIVSALDYLHSGK Unmodified 1868.9309 0.93086439 3330 Q9WUA6 Akt3 RAC-gamma serine/threonine-protein kinase yes yes 0 0 0 0 9 0 1 86.015 86.015 3 3.3906E-05 30005 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.481 55.077 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 1 0 1 0 4963.6 6851 3330 6590 16011 18540 18540 1 FYGDLEK Unmodified 870.41233 0.41233399 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 10 3 1 1 59.427 59.427 2;3 0.030513 20491 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.45 25.238 29.687 27.171 37.043 27.178 64.755 57.848 28 28 37 28 65 56 1 1 1 1 1 1 3454.3 6852 1375 6591 16012;16013 18541;18542 18542 2 FYGDLEKDK Unmodified 1113.5342 0.53424004 1375 P14211 Calr Calreticulin yes yes 0 0 0 1 10 3 1 1 55.669 55.669 3 0.0049663 18474 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.233 41.811 399.03 335.7 458.43 336.17 316.1 457.89 376 348 458 338 332 438 1 1 1 1 1 1 26568 6853 1375 6592 16014;16015 18543;18544 18544 2 FYGEPVVK Unmodified 937.49092 0.49091866 2635 Q8R127;J3QNN5 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 0 7 0 1 59.303 59.303 2 0.0053715 18944 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.833 43.806 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6854 2635 6593 16016 18545 18545 1 FYGLYCVQSGGK Unmodified 1377.6387 0.63872189 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 11 0.816 1 1 1 67.129 67.129 2;3 1.8504E-07 16700 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.15 80.056 118.6 78.736 84.243 114.86 192.3 155.82 111 74 83 111 194 149 2 1 1 1 3 2 40567 6855 1044 6594 16017;16018;16019 18546;18547;18548 18548 3 FYGPAGPYGIFAGR Unmodified 1471.7248 0.72483478 2318 Q80UU9 Pgrmc2 Membrane-associated progesterone receptor component 2 yes yes 0 0 0 0 11.5 0.5 1 1 76.608 76.608 2;3 0.00013732 22962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.148 51.406 39.701 0 0 38.891 82.403 76.533 37 0 0 37 83 74 1 0 0 1 1 1 10621 6856 2318 6595 16020;16021 18549;18550 18549 2 FYGPEGPYGVFAGR Unmodified 1515.7147 0.71466402 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 0 10.3 2.05 1 1 1 72.568 72.568 2 0.00014291 24543 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.48 70.195 89.715 28.989 118.06 0 0 49.036 84 28 111 0 0 46 2 1 2 0 0 1 15853 6857 1228 6596 16022;16023;16024 18551;18552;18553 18551 3 FYLDLYPR Unmodified 1085.5546 0.55458155 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 11.5 1.5 1 1 75.974 75.974 2 0.0089522 23209 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.253 84.763 48.999 0 60.345 0 84.521 66.878 46 0 56 0 83 65 1 0 1 0 1 1 5152 6858 145 6597 16025;16026 18554;18555 18554 2 FYLEPYLK Unmodified 1071.5641 0.56408361 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 10.5 0.5 1 1 77.289 77.289 2;3 0.028736 23691 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.127 23.028 39.354 0 58.309 46.803 0 0 37 0 56 46 0 0 1 0 1 1 0 0 3484 6859 2919 6598 16027;16028 18556;18557 18556 2 FYLGGPTSVR Unmodified 1095.5713 0.57129425 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 10.5 0.5 1 1 60.148 60.148 2 0.00012568 15603 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.51 69.251 157.53 55.749 166.82 111 0 118.33 148 65 158 111 0 111 1 1 1 1 0 1 46241 6860 2379 6599 16029;16030 18558;18559 18559 2 FYLLVVVGETVTEEHLR Unmodified 2003.0728 0.072777598 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 10 0 2 97.447 97.447 3 6.0588E-05 31863 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.568 56.647 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 1025.2 6861 1382 6600 16031;16032 18560;18561 18560 2 FYLTFEGSSR Unmodified 1205.5717 0.57168818 1024 F7CPX0 Sgip1 yes yes 0 0 0 0 9.5 0.5 1 1 69.455 69.455 2 3.3917E-05 22367 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.44 92.68 0 97.549 201.2 64.057 0 99.138 0 93 194 65 0 93 0 1 2 1 0 1 17393 6862 1024 6601 16033;16034 18562;18563 18562 2 FYLYPDLSR Unmodified 1172.5866 0.58660996 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 0 10 0.816 1 1 1 73.671 73.671 2;3 0.00036149 24426 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.46 0 399.83 342.56 363.5 153.92 525.58 339.98 376 353 357 158 515 333 3 4 3 2 2 3 55594 6863 1497 6602 16035;16036;16037 18564;18565;18566;18567 18565 4 FYMYELLK Unmodified 1105.5518 0.55180436 271 A0A1D5RLE4;O54833;A0A1D5RM74 Csnk2a2 Casein kinase II subunit alpha' yes no 0 0 0 0 10.5 0.5 1 1 81.889 81.889 2 0.0080271 25456 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.92 0 139 42.841 46.804 70.201 103.47 0 130 46 46 65 102 0 2 1 1 1 2 0 13360 6864 271 6603 16038;16039 18568;18569 18569 2 FYNELTEILVR Unmodified 1395.7398 0.73981614 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 8 0 1 87.248 87.248 2 0.0031428 31481 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.666 51.137 0 29.478 18.789 0 38.044 19.168 0 28 19 0 37 19 0 1 1 0 1 1 1980.3 6865 3327 6604 16040 18570 18570 1 FYPEDVAEELIQDITQK Unmodified 2036.9943 0.99425251 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 6 0 1 109.28 109.28 3 2.9027E-12 38044 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.78 100.38 0 0 0 0 0 8 0 0 0 0 0 8 0 0 0 0 0 1 1732.4 6866 1451 6605 16041 18571 18571 1 FYPEDVSEELIQDITQR Unmodified 2080.9953 0.99531514 1452 P26041 Msn Moesin yes yes 0 0 0 0 4.5 0.5 1 1 95.089 95.089 3 1.1196E-25 34341 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 140.96 115.35 0 0 4.1956 2.9725 3.0015 0 0 0 4 3 3 0 0 0 1 1 1 0 3145.7 6867 1452 6606 16042;16043 18572;18573 18572 2 FYPPDPAQLSEDITR Unmodified 1747.8417 0.84171503 3345 Q9WV92;A7YY80;A0A286YCY8 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 0 7.2 2.99 2 1 1 1 77.914 77.914 2;3 3.3501E-05 29115 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.175 52.852 79.22 65.204 47.137 65.802 84.287 77.545 74 65 46 61 84 75 3 3 2 3 3 3 25893 6868 3345 6607 16044;16045;16046;16047;16048 18574;18575;18576;18577;18578 18574 5 FYPPDPAQLTEDITR Unmodified 1761.8574 0.85736509 526;433 A2A839;A2A838;A2A842;A2A841;P48193;A2AD32;A0A1D5RLV1;A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1;Epb41;Epb4.1l1;Epb41l1 Protein 4.1;Band 4.1-like protein 1 no no 0 0 0 0 7.25 3.34 2 1 1 81.313 81.313 2;3 4.3883E-08 31383 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.114 61.323 20.076 47.712 56.353 28.621 26.222 38.951 19 47 56 28 28 37 1 2 2 1 2 1 10652 6869 433;526 6608 16049;16050;16051;16052 18579;18580;18581;18582 18582 4 FYPPDPSQLTEDITR Unmodified 1777.8523 0.85227972 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 8 3.56 1 1 1 79.37 79.37 3 1.1876E-05 29865 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.83 84.759 39.302 104.37 89.939 94.88 74.882 95.935 37 102 93 93 74 92 1 3 3 3 1 2 17997 6870 1250 6609 16053;16054;16055 18583;18584;18585 18583 3 FYPVLYPK Unmodified 1025.5586 0.5586043 488 A2ALS5;A2ALS4;A2ALS3 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 0 0 0 9.25 4.82 1 1 1 1 73.012 73.012 2 0.0010837 21301 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 145.87 115.45 345.84 261.69 518.71 206.02 405.28 506.51 325 264 504 204 405 486 3 3 4 2 2 3 42768 6871 488 6610 16056;16057;16058;16059 18586;18587;18588;18589;18590 18587 5 FYQASTSELYGK Unmodified 1392.6561 0.65614609 2578 Q8K0C9 Gmds GDP-mannose 4,6 dehydratase yes yes 0 0 0 0 8 0 1 63.296 63.296 3 0.0001732 20116 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.466 40.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6872 2578 6611 16060 18591 18591 1 FYQGIFVSPFLTETGEYYK Unmodified 2288.1041 0.10413731 3064 Q9D4H8;E0CYT5 Cul2 Cullin-2 yes no 0 0 0 0 9.33 0.471 2 1 95.285 95.285 3;4 1.3598E-07 34087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.514 60.83 0 0 29.198 8.0893 28.916 0 0 0 28 9 28 0 0 0 2 1 1 0 2839.5 6873 3064 6612 16061;16062;16063 18592;18593;18594 18593 3 FYRDPTAFGSGIHK Unmodified 1594.7892 0.78922595 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 1 9 0 1 54.21 54.21 4 0.013308 15161 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.69 23.851 137.91 126.38 157.69 111.92 0 227.06 130 130 158 111 0 213 1 1 1 1 0 1 9529.2 6874 3258 6613 16064 18595 18595 1 FYSQAIELNPGNAIYYGNR Deamidation (N) 2190.0382 0.038183005 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 1 0 0 8 0 1 76.355 76.355 3 1.2417E-06 26265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.138 63.607 59.91 35.328 0 0 46.807 38.106 56 37 0 0 46 37 1 1 0 0 1 1 8481.1 6875 2080 6614 16065 18596 18596 806 1 FYSQAIELNPGNAIYYGNR Unmodified 2189.0542 0.054167421 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 9 0 1 76.301 76.301 3 1.026E-05 25553 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.467 48.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9317.7 6876 2080 6614 16066 18597 18597 1 FYSSFSGGFK Unmodified 1125.5131 0.51311067 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 10.5 0.5 1 1 69.039 69.039 2 0.0018668 19594 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.392 62.833 49.358 0 0 115.9 55.813 78.884 46 0 0 107 56 74 1 0 0 2 1 1 11280 6877 2841 6615 16067;16068 18598;18599 18599 2 FYSVNVDYSK Unmodified 1220.5714 0.57135383 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 63.91 63.91 2;3 4.6987E-09 19858 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 155.42 92.706 335.52 279.33 368.89 563.03 442.44 302.02 315 287 366 546 456 291 2 3 2 5 4 2 174410 6878 2157 6616 16069;16070;16071;16072;16073;16074 18600;18601;18602;18603;18604;18605 18601 6 FYTDPSYFFDLWK Unmodified 1727.7872 0.78716026 2716 Q8VHI6 Wasf3 Wiskott-Aldrich syndrome protein family member 3 yes yes 0 0 0 0 11.3 1.25 1 1 1 103.65 103.65 3 8.3115E-05 33334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.565 5.9764 29.8 0 40.966 0 32.598 18 28 0 38 0 32 18 2 0 2 0 2 1 10705 6879 2716 6617 16075;16076;16077 18606;18607;18608;18609 18606 4 FYTDPVEAVK Unmodified 1167.5812 0.58119023 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 7.75 3.11 1 1 1 1 66.31 66.31 2;3 7.3822E-09 23019 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.28 75.378 295.74 262.81 207.03 220.47 0 325.13 278 269 204 213 0 305 3 3 2 3 0 3 45614 6880 3028 6618 16078;16079;16080;16081 18610;18611;18612;18613 18611 4 FYTESGVLLLAQLLNEDK Unmodified 2052.0779 0.077922555 63 E9QKE4;A0A0A6YWM5 Rab3gap2 yes no 0 0 0 0 9 0 1 105.51 105.51 3 0.0087494 36947 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.523 28.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6881 63 6619 16082 18614 18614 1 FYTGTGFK Unmodified 919.44397 0.44396847 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 11.5 1.12 1 1 1 1 60.577 60.577 2;3 0.0058446 21189 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.324 43.986 0 0 118.04 46.209 412 69.29 0 0 111 46 412 65 0 0 2 1 1 1 67315 6882 1151 6620 16083;16084;16085;16086 18615;18616;18617;18618 18618 4 FYTIDTGQK Unmodified 1071.5237 0.52367535 2028 Q4KMM3 Oxr1 Oxidation resistance protein 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 59.288 59.288 2;3 0.00031867 20592 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.36 94.983 108.35 215.84 328.61 105.97 238.3 358.84 102 213 315 111 241 343 2 3 3 2 3 4 36622 6883 2028 6621 16087;16088;16089;16090 18619;18620;18621;18622 18622 4 FYTLFGR Unmodified 902.46504 0.46503826 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 12 0 1 72.891 72.891 2 0.02344 18794 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.02 69.164 88.547 0 86.045 74.415 71.163 82.183 83 0 83 74 74 79 1 0 1 1 1 1 26878 6884 2536 6622 16091 18623 18623 1 FYTNPSYFFDLWK Unmodified 1726.8031 0.80314468 2674 Q8R5H6;Q8BH43 Wasf1;Wasf2 Wiskott-Aldrich syndrome protein family member 1;Wiskott-Aldrich syndrome protein family member 2 yes no 0 0 0 0 11.3 0.471 2 1 98.797 98.797 2;3 9.2416E-05 28251 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.729 56.08 54.371 106.23 19.599 67.83 64.307 28.555 51 102 19 65 65 28 2 2 1 3 2 1 39236 6885 2674 6623 16092;16093;16094 18624;18625;18626;18627 18627 4 FYVHNDIFR Unmodified 1209.5931 0.59309232 1859 P97855 G3bp1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 0 9 0 1 58.552 58.552 3 0.0044645 17197 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.582 46.249 49.176 36.052 0 0 0 59.696 46 37 0 0 0 56 1 1 0 0 0 1 4433.4 6886 1859 6624 16095 18628 18628 1 FYYLDEHR Unmodified 1141.5193 0.51925868 498 H3BIW6;F7C3A0;A2AP18;A0A087WSR3;F6UKG4 Plch2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 yes no 0 0 0 0 6 0 1 52.674 52.674 3 0.050249 16597 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.083 29.575 69.243 33.768 55.668 57.212 36.074 0 65 37 56 56 37 0 1 1 1 1 1 0 2451.8 6887 498 6625 16096 18629 18629 1 FYYLGPFK Unmodified 1033.5273 0.52730417 1123 H3BKV8;P70408 Cdh10 Cadherin-10 yes no 0 0 0 0 12 0 1 78.801 78.801 2 0.011622 21236 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.692 56.812 0 0 49.772 0 53.346 0 0 0 46 0 51 0 0 0 1 0 1 0 4389 6888 1123 6626 16097 18630 18630 1 FYYLIHPTK Unmodified 1180.6281 0.62808085 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 8 4.97 1 1 1 65.172 65.172 3 0.0011852 17630 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.548 54.95 494.58 525.56 363.67 456.63 255.36 496.94 465 531 367 442 259 469 4 5 3 5 3 3 97339 6889 3258 6627 16098;16099;16100 18631;18632;18633;18634;18635 18633 5 FYYSSGSSSPTHAK Unmodified 1517.6787 0.67867245 2086 Q60771 Cldn11 Claudin-11 yes yes 0 0 0 0 10 1.41 1 1 1 1 1 44.148 44.148 3 1.2001E-21 10475 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 136.17 106.11 108.99 157.25 190.46 147.92 308.12 381.36 102 149 190 149 311 366 1 3 3 3 3 4 65520 6890 2086 6628 16101;16102;16103;16104;16105 18636;18637;18638;18639;18640 18637 5 FYYYSAASQR Unmodified 1254.5669 0.56693715 1079 H7BX46;G3X932;P59281;H3BJM3 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 10 0 1 54.79 54.79 2 0.013399 13636 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.56 42.236 0 57.583 56.055 0 29.288 0 0 55 55 0 28 0 0 1 1 0 1 0 3177.4 6891 1079 6629 16106 18641 18641 1 GAAANPENEDQQQR Unmodified 1526.671 0.67096131 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 13 0 1 27.517 27.517 3 0.064427 5444 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.526 23.116 0 9.0786 29.751 0 0 0 0 9 28 0 0 0 0 1 1 0 0 0 1269.3 6892 287 6630 16107 18642 18642 1 GAAGALLVYDITR Unmodified 1318.7245 0.72450043 1617 P53994;Q3TEG7;P59279 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B no no 0 0 0 0 6.8 3.06 1 1 2 1 73.398 73.398 2;3 3.3961E-11 24837 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.54 98.314 40.418 65.809 187.83 67.802 53.811 166.37 38 65 176 65 56 157 1 2 2 2 2 2 41035 6893 1617 6631 16108;16109;16110;16111;16112 18643;18644;18645;18646;18647 18645 5 GAAGALLVYDITSR Unmodified 1405.7565 0.75652884 2785;1633 Q91ZR1;P56371 Rab4b;Rab4a Ras-related protein Rab-4B;Ras-related protein Rab-4A no no 0 0 0 0 9 0 1 74.272 74.272 2 0.0016335 24654 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.069 38.721 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 4763.3 6894 2785;1633 6632 16113 18648 18648 1 GAALDVHESEPFSFSQGPLK Unmodified 2115.0273 0.027283968 114 A0A0J9YU62;O88712 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 6 0 1 68.186 68.186 4 6.288E-11 23872 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.418 59.13 69.152 46.283 60.442 59.847 167.34 133.8 65 46 56 56 167 130 2 1 1 1 2 2 6674.5 6895 114 6633 16114 18649;18650 18649 2 GAALITAVGVR Unmodified 1026.6186 0.61857879 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9.75 3.53 1 1 2 1 2 1 59.157 59.157 2;3 4.5655E-16 17528 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 164.46 121.27 1437.7 1216.4 1647.6 1413.6 695.93 1567.9 1354 1251 1647 1383 733 1485 3 4 5 4 3 5 270220 6896 1055 6634 16115;16116;16117;16118;16119;16120;16121;16122 18651;18652;18653;18654;18655;18656;18657;18658 18652 8 GAALQQTQAPEPR Unmodified 1365.7001 0.70007659 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8 3.56 1 1 1 38.813 38.813 2 5.452E-21 10707 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 158.08 125.08 49.358 38.738 74.677 99.446 27.631 78.096 46 37 74 93 28 74 1 1 2 2 1 2 15246 6897 510 6635 16123;16124;16125 18659;18660;18661 18661 3 GAAMVTAVAYR Unmodified 1108.5699 0.56991404 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 8.67 3.77 1 1 1 1 1 1 52.51 52.51 2 3.5986E-20 15115 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 174.92 132.81 780.97 0 1099.5 416.5 1115.3 215.35 733 0 1037 418 1090 209 3 0 5 3 4 1 86068 6898 1055 6636 16126;16127;16128;16129;16130;16131 18662;18663;18664;18665;18666;18667;18668 18663 7 GAAPPPAASGHR Unmodified 1087.5523 0.55229014 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 6.67 2.98 1 2 1 1 1 22.942 22.942 2;3 3.9642E-12 3324 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.99 99.649 16.841 47.852 101.06 64.596 52.85 69.539 16 47 97 61 52 66 2 5 5 3 3 4 33363 6899 510 6637 16132;16133;16134;16135;16136;16137 18669;18670;18671;18672;18673;18674;18675 18674 7 GAAQNIIPASTGAAK Deamidation (N) 1369.7201 0.72014333 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 5.33 0.471 2 1 54.017 54.017 2;3 6.8764E-10 17334 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.69 80.48 88.108 91.637 82.184 58.478 91.535 146.63 83 93 83 56 93 140 2 2 2 2 2 3 11075 6900 1395;3448 6638 16138;16139;16140 18676;18677;18678 18678 464 3 GAAQNIIPASTGAAK Unmodified 1368.7361 0.73612775 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 9.89 2.42 1 1 1 1 1 1 1 2 52.034 52.034 2;3 1.6181E-29 17031 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.52 115.3 6042.7 4417.8 6436.1 4839.1 6663.4 7108.8 5688 4596 6409 4834 6811 6847 14 9 12 10 12 13 2272900 6901 1395;3448 6638 16141;16142;16143;16144;16145;16146;16147;16148;16149 18679;18680;18681;18682;18683;18684;18685;18686;18687;18688;18689;18690;18691;18692;18693;18694 18694 16 GAASPAQK Unmodified 728.3817 0.38170256 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637;B1AQW5 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 7.75 3.11 1 1 1 1 30.513 30.513 2 0.010179 5700 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.299 52.581 161.2 500.03 243.64 32.719 645.74 311.31 153 484 255 32 629 307 3 4 4 1 4 3 45738 6902 572;46 6639 16150;16151;16152;16153 18695;18696;18697;18698 18697 4 GAASSTDSLDTLSNGPEGCVVAAVAAR Deamidation (N) 2576.2024 0.20242415 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 1 0 0 3.5 0.5 1 1 72.31 72.31 3 3.3476E-20 26696 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.68 77.058 0 19.892 19.365 40.441 0 9.594 0 19 19 37 0 9 0 1 1 1 0 1 3981.2 6903 1415 6640 16154;16155 18699;18700 18699 517 2 GAATQQEFYAK Unmodified 1212.5775 0.57750184 3239 Q9JKY5;A0A0G2JFU3 Hip1r Huntingtin-interacting protein 1-related protein yes no 0 0 0 0 6 0 1 48.913 48.913 3 0.057915 14698 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.417 19.249 69.401 24.494 37.004 27.174 65.122 47.178 65 28 37 28 65 46 1 1 1 1 1 1 70095 6904 3239 6641 16156 18701 18701 1 GAAVDFTAR Unmodified 906.45593 0.45593014 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5.5 0.5 1 1 45.576 45.576 2 0.00093972 13303 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.22 58.788 39.144 45.384 170.65 159.99 134.72 223.21 37 46 167 158 139 213 1 1 2 2 1 2 22113 6905 3449;3451;3452 6642 16157;16158 18702;18703 18703 2 GAAVNLTLVTPEK Unmodified 1311.7398 0.73981614 3075;3112 Q9D6M3;E9PY45;E9PV90;E9Q6M6;Q80X52;E9Q579;A0A0J9YUX4;V9GWS2;Q9DB41 Slc25a22;Slc25a18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 no no 0 0 0 0 10.5 2.6 1 1 2 65.857 65.857 2;3 3.3697E-21 22110 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 159.44 106.28 442.84 291.23 345.34 562.97 296.45 390.14 416 297 343 539 305 371 5 4 3 5 3 4 47624 6906 3075;3112 6643 16159;16160;16161;16162 18704;18705;18706;18707;18708 18704 5 GAAVSNNIVVRPSR Unmodified 1438.8005 0.80045934 331 A0A1W2P7Y9;Q810U4;A0A1W2P814;A0A1W2P6P3 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 1 9.2 1.72 1 1 1 1 1 39.494 39.494 3 7.574E-07 8931 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.6 86.364 137.71 76.649 116.23 158.6 212.25 267.68 129 75 111 153 218 256 3 3 2 3 4 4 30132 6907 331 6644 16163;16164;16165;16166;16167 18709;18710;18711;18712;18713 18710 5 GACAGSEDAVK Unmodified 1063.4604 0.46042317 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.8 3.66 1 2 1 1 36.599 36.599 2;3 5.4087E-14 10017 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.96 114.71 464.36 849.48 648.5 647.94 721.57 406.78 437 838 665 638 728 396 4 6 5 5 6 3 85176 6908 551 6645 16168;16169;16170;16171;16172 18714;18715;18716;18717;18718;18719;18720 18716 7 GADAQEDLR Unmodified 973.44649 0.44648767 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 13 0 1 32.889 32.889 2 0.00074852 7958 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.3 67.858 208.47 120.81 206.31 210.13 145.16 0 196 130 207 206 148 0 1 1 1 1 1 0 58354 6909 2133 6646 16173 18721 18721 1 GADCCVLVFDVTAPNTFK Unmodified 2012.9336 0.93358328 1600 P51150;A0A0N4SVG9 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 7 0 1 81.402 81.402 4 0.055491 29360 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 28.472 7.239 29.54 56.983 36.466 0 0 78.884 28 56 37 0 0 74 1 1 1 0 0 1 1462 6910 1600 6647 16174 18722 18722 1 GADDAADADTAIINAEGGQNNSEEK Deamidation (N) 2476.0474 0.047363301 856 Q8R5M8;E9PYN1 Cadm1 Cell adhesion molecule 1 yes no 0 1 0 0 1 0 2 58.996 58.996 3 1.8065E-19 19006 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.477 69.174 0 29.073 8.5336 0 19.874 0 0 28 9 0 19 0 0 2 1 0 1 0 4352.3 6911 856 6648 16175;16176 18723;18724 18723 227;228 2 GADDAADADTAIINAEGGQNNSEEK Unmodified 2475.0633 0.063347716 856 Q8R5M8;E9PYN1 Cadm1 Cell adhesion molecule 1 yes no 0 0 0 0 2.5 0.5 1 1 57.691 57.691 3 7.0295E-23 19660 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.978 77.247 19.062 28.198 18.478 29.334 8.9699 0 18 28 19 28 9 0 2 2 1 2 1 0 5892.9 6912 856 6648 16177;16178 18725;18726 18725 2 GADEAALAR Unmodified 872.43519 0.4351947 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 6.33 4.78 1 1 1 35.528 35.528 2 0.00087344 9704 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 112.84 46.16 148.29 87.778 110.32 84.652 147.98 85.628 139 93 111 83 148 83 1 1 2 1 2 1 18658 6913 1329 6649 16179;16180;16181 18727;18728;18729 18727 3 GADFLVTEVENGGSLGSK Deamidation (N) 1779.8527 0.85267365 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 1 0 0 6.86 3.5 5 7 4 5 75.734 75.734 2;3;4 6.9389E-45 27788 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.48 119.89 653.77 876.69 883.77 1047.3 725.62 922.71 615 871 891 1012 742 883 12 15 14 16 11 15 404930 6914 1609 6650 16182;16183;16184;16185;16186;16187;16188;16189;16190;16191;16192;16193;16194;16195;16196;16197;16198;16199;16200;16201;16202 18730;18731;18732;18733;18734;18735;18736;18737;18738;18739;18740;18741;18742;18743;18744;18745;18746;18747;18748;18749;18750;18751 18747 619 22 GADFLVTEVENGGSLGSK Unmodified 1778.8687 0.86865806 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 0 0 0 7.5 3.2 1 2 1 76.643 76.643 2;3 1.9778E-26 28472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.66 116.56 178.32 98.78 62.927 144.7 163.7 126.18 167 102 65 138 167 121 4 3 1 3 4 2 53201 6915 1609 6650 16203;16204;16205;16206 18752;18753;18754;18755;18756 18752 5 GADIMYTGTLDCWR Unmodified 1657.7229 0.72286222 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 8 2.92 2 1 1 71.719 71.719 2;3 2.5558E-16 25628 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130.01 101.8 109.49 94.553 93.317 67.669 99.581 155.99 103 93 93 65 102 149 4 2 3 2 3 4 21083 6916 1585 6651 16207;16208;16209;16210 18757;18758;18759;18760 18757 4 GADINAPDK Unmodified 899.43486 0.43486035 1738 P62774;A0A0J9YV46 Mtpn Myotrophin yes no 0 0 0 0 4.5 0.5 1 1 42.496 42.496 2;3 0.0035285 12710 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.15 35.993 59.711 74.71 0 50.278 84.521 115.91 56 74 0 46 83 111 1 1 0 1 1 2 8351.3 6917 1738 6652 16211;16212 18761;18762 18761 2 GADQEYSAFR Unmodified 1142.4993 0.49925152 1104 G5E8H1 Gria2 no no 0 0 0 0 6.25 3.96 1 1 1 1 44.596 44.596 2 3.7263E-05 13494 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.63 77.766 138.15 166.98 120.72 107.89 147.29 153.57 130 167 120 102 148 148 2 2 2 2 2 2 28584 6918 1104 6653 16213;16214;16215;16216 18763;18764;18765;18766 18766 4 GADSGLLTEPVIR Unmodified 1326.7143 0.71432967 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 8 3.56 1 1 1 61.752 61.752 2 0.00026824 21655 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.229 59.118 118.49 120.75 0 49.249 130.76 86.12 111 121 0 46 130 83 3 3 0 1 3 2 9313.7 6919 3449;3451 6654 16217;16218;16219 18767;18768;18769 18767 3 GADTVIYER Unmodified 1022.5033 0.50327426 121 A0A0M3HEP7;P70704;Q148W0 Atp8a1;Atp8b1 Phospholipid-transporting ATPase IA;Phospholipid-transporting ATPase IC yes no 0 0 0 0 4 0 1 44.062 44.062 2 0.0015325 13400 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.98 66.981 48.547 74.235 73.401 44.174 91.934 96.515 46 74 74 46 93 93 1 1 1 1 1 1 10044 6920 121 6655 16220 18770 18770 1 GAEADQIIEYLK Unmodified 1348.6874 0.68744622 1494 Q3UZG4;P31230;A0A0G2JDH0;A0A0G2JEU9;A0A0G2JDV0;A0A0G2JDW6 Aimp1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 0 5 0 1 77.227 77.227 3 0.0019545 28770 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.951 41.412 0 0 0 29.185 75.442 18.101 0 0 0 28 74 19 0 0 0 1 1 1 3352.7 6921 1494 6656 16221 18771 18771 1 GAEALQK Unmodified 715.38645 0.38645359 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 6 0 1 40.101 40.101 2 0.027527 10852 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.541 39.451 147.58 145.16 140.94 0 154.81 0 139 148 139 0 148 0 1 1 1 0 1 0 81800 6922 487 6657 16222 18772 18772 1 GAEASAASK Unmodified 790.3821 0.38209649 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 0 0 0 5 0 1 30.959 30.959 2 0.0144 6796 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.056 27.947 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 2286.8 6923 1480 6658 16223 18773 18773 1 GAEDAPDADTAIINAEGSQVNAEEK Unmodified 2514.1358 0.13578438 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 4 4.56 2 1 1 1 62.031 62.031 3;4 6.289E-23 21702 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.978 78.314 119.32 18.214 127.61 37.471 85.097 50.102 112 19 121 37 83 47 5 1 4 1 2 2 66297 6924 1072 6659 16224;16225;16226;16227;16228 18774;18775;18776;18777;18778;18779 18776 6 GAEDAPDADTAIINAEGSQVNAEEK Deamidation (N) 2515.1198 0.11979996 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 1 0 0 1.67 0.471 1 2 63.215 63.215 3;4 7.2702E-16 22266 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.696 57.386 20.121 38.295 46.7 39.392 28.987 8.7668 19 38 47 37 28 9 1 2 2 1 1 1 3051 6925 1072 6659 16229;16230;16231 18780;18781;18782;18783;18784 18783 284;285 5 GAEDAPDADTAIINAEGSQVNAEEKK Unmodified 2642.2307 0.2307474 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 1 3 0.707 1 2 1 58.791 58.791 3;4;5 5.5552E-26 20676 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.35 101.57 117.99 119.07 102.46 84.612 74.402 117.27 111 121 102 83 74 112 2 3 1 1 2 3 27333 6926 1072 6660 16232;16233;16234;16235 18785;18786;18787;18788 18786 4 GAEEMETVIPVDVMR Oxidation (M) 1690.7906 0.79060744 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 1 0 3 0 1 65.517 65.517 3 0.0023604 23722 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.527 43.391 9.657 0 0 0 19.197 19.706 9 0 0 0 19 19 1 0 0 0 1 1 1421.9 6927 2868 6661 16236 18789 18789 187 1 GAEEMETVIPVDVMR Unmodified 1674.7957 0.79569281 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 7.6 4.45 1 1 1 2 73.939 73.939 2;3 2.037E-11 27938 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.338 64.588 0 19 19 49.042 65.737 0 0 19 19 46 65 0 0 1 1 1 1 0 45755 6928 2868 6661 16237;16238;16239;16240;16241 18790;18791;18792;18793;18794 18794 5 GAEILADTFK Unmodified 1063.555 0.55497548 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 7 0 1 68.88 68.88 3 0.0016452 23541 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.893 34.172 60.088 0 0 0 38.044 19.168 56 0 0 0 37 19 1 0 0 0 1 1 10321 6929 2980 6662 16242 18795 18795 1 GAEILADTFKDYAVSTVPVADSLHLK Unmodified 2759.4382 0.4381614 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 1 8 0 2 87.731 87.731 4;5 7.2377E-06 31730 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.857 39.055 0 19.82 63.731 0 29.288 0 0 19 60 0 28 0 0 1 2 0 1 0 2880.9 6930 2980 6663 16243;16244 18796;18797 18797 2 GAEILEVLHSLPAVR Unmodified 1602.9093 0.90934108 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 8 0 1 80.923 80.923 3 8.1462E-05 28478 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.444 64.97 0 0 38.774 28.293 0 29.848 0 0 37 28 0 28 0 0 1 1 0 1 4553.1 6931 2829 6664 16245 18798 18798 1 GAELEYESLK Unmodified 1137.5554 0.55536941 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 4 0 1 58.431 58.431 3 0.0013174 20215 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.006 37.473 19.853 27.341 66.526 46.313 0 49.036 19 28 65 46 0 46 1 1 1 1 0 1 3984.2 6932 728 6665 16246 18799 18799 1 GAELEYESLKR Unmodified 1293.6565 0.65648044 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 1 5 0 1 50.479 50.479 3 5.028E-06 16226 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.155 54.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6933 728 6666 16247 18800 18800 1 GAENFDK Unmodified 779.34498 0.34498271 2030;1425 P20444;Q4VA93;Q3TQ39 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 5 0 1 41.663 41.663 3 0.055054 11953 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.59 16.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6934 1425;2030 6667 16248 18801 18801 1 GAEPSQQALGPEQK Unmodified 1438.7052 0.70522155 319 A0A1W2P6S9;E9PWP6;F6TZK4;F6Y0S3;F6VBV0;F6VBT9;F6VBR4;Q99NE5 Rims1 Regulating synaptic membrane exocytosis protein 1 yes no 0 0 0 0 4 0 1 43.734 43.734 3 0.00062288 13309 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.675 44.579 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 0 1874.6 6935 319 6668 16249 18802 18802 1 GAFCDLVWSDPEDVDTWAISPR Unmodified 2535.1376 0.13763905 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 5 0 1 92.191 92.191 3 2.5272E-16 34804 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.17 83.739 6.438 0 0 0 6.0623 6.223 6 0 0 0 6 6 1 0 0 0 1 1 1534.1 6936 134 6669 16250 18803 18803 1 GAFGKPQGTVAR Unmodified 1187.6411 0.64110515 1136 I7HLV2;Q6ZWV3;P86048 Rpl10;Rpl10l 60S ribosomal protein L10;60S ribosomal protein L10-like yes no 0 0 0 1 10.5 0.5 1 1 40.008 40.008 3 0.002657 7778 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.194 40.859 412.25 168.66 0 307.06 236.44 377.01 385 179 0 285 249 360 2 1 0 1 1 2 32729 6937 1136 6670 16251;16252 18804;18805 18804 2 GAFPPVWNPLAYLDYNNLWR Unmodified 2405.1957 0.1956867 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 12 0.816 1 1 1 108.32 108.32 3 2.9705E-11 29639 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.07 65.412 4.292 0 4 7.651 19 0 4 0 4 7 19 0 1 0 1 1 1 0 4201.7 6938 2168 6671 16253;16254;16255 18806;18807;18808;18809 18807 4 GAFSVVR Unmodified 734.40752 0.40752338 1475;1355;2818;103 P11798;F8WIS9;D3Z7K9;F6WHR9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;E9QAJ4;D6RDQ8;Q923T9;A0A2I3BQP6 Camk2a;Camk2b;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 10.5 2.06 1 1 1 1 45.902 45.902 2 0.0070309 11219 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.05 89.13 4923.5 4499.3 4475.5 4291 3899.3 5108.7 4634 4611 4549 4237 4084 4894 5 6 4 6 6 5 1406100 6939 1355;1475;103;2818 6672 16256;16257;16258;16259 18810;18811;18812;18813;18814;18815 18812 6 GAGAFGYFEVTHDITR Unmodified 1739.8267 0.82673367 1442 P24270;A2AL20 Cat Catalase yes no 0 0 0 0 7 0 1 65.54 65.54 3 0.0012153 21811 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.158 37.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6940 1442 6673 16260 18816 18816 1 GAGAYICGEETALIESIEGK Unmodified 2066.983 0.98303589 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 4.5 0.5 2 2 89.561 89.561 3;4 1.9469E-13 33683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.82 94.901 0 43.43 26.739 25.139 14.644 26.254 0 41 26 23 14 25 0 3 3 1 1 2 10647 6941 680 6674 16261;16262;16263;16264 18817;18818;18819;18820;18821 18817 5 GAGGSLQK Unmodified 716.3817 0.38170256 3235 Q9JKV5 Scamp4 Secretory carrier-associated membrane protein 4 yes yes 0 0 0 0 7 0 1 36.155 36.155 2 0.03951 8014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.903 25.674 78.809 53.36 54.411 57.965 0 59.696 74 56 56 56 0 56 1 1 1 1 0 1 50199 6942 3235 6675 16265 18822 18822 1 GAGLFLLAGPAEAVETLGPR Unmodified 1938.0575 0.057461884 423 A2A4P4;A2A4P3;Q3THG9 Gm27029;Aarsd1 Alanyl-tRNA editing protein Aarsd1 yes no 0 0 0 0 8.5 0.5 1 1 93.433 93.433 3 0.0037862 33437 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.952 27.815 20.178 18.532 19.344 0 0 0 19 19 19 0 0 0 1 1 1 0 0 0 5317 6943 423 6676 16266;16267 18823;18824 18824 2 GAGPCSPGLER Unmodified 1099.508 0.50804206 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 4.5 0.5 1 1 36.641 36.641 2 0.0065621 10014 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.397 38.144 40.378 55.795 63.814 66.557 36.414 28.809 38 56 65 65 37 28 1 2 2 2 1 1 6585.5 6944 2629 6677 16268;16269 18825;18826 18825 2 GAGTDDHTLIR Unmodified 1154.568 0.56799978 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 7 4.32 1 1 1 34.513 34.513 3 0.00042577 8641 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.799 49.25 306.79 151.27 248.05 46.805 286.63 280.71 288 158 241 46 284 271 3 1 3 1 2 3 34889 6945 1577 6678 16270;16271;16272 18827;18828;18829 18829 3 GAGTDDSTLVR Unmodified 1090.5255 0.52546627 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 8.5 4.5 1 1 37.776 37.776 2 1.8605E-07 10272 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.08 79.434 0 48.029 94.793 66.255 81.145 106.42 0 46 93 65 83 102 0 1 2 1 1 2 16593 6946 372 6679 16273;16274 18830;18831 18831 2 GAGTDEFTLNR Unmodified 1179.552 0.55201537 1202 O35639 Anxa3 Annexin A3 yes yes 0 0 0 0 4 0 1 49.386 49.386 2 8.1928E-08 15979 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.99 82.355 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 3119.5 6947 1202 6680 16275 18832 18832 1 GAGWLFGAK Unmodified 905.47594 0.4759373 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 12 0.816 1 1 1 70.718 70.718 2;3 0.00048044 18051 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.89 68.877 147.67 290.96 266.19 255.65 165.92 274 139 287 269 250 167 259 1 3 2 2 2 2 84467 6948 134 6681 16276;16277;16278 18833;18834;18835 18834 3 GAGYTFGQDISETFNHANGLTLVSR Deamidation (N) 2655.2565 0.25650864 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 1 0 0 6 1 1 1 77.799 77.799 3;4 7.5431E-11 27541 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.612 44.928 39.512 17.265 17.151 48.747 27.049 0 37 19 19 46 28 0 1 1 1 1 1 0 4306.2 6949 1731;1787 6682 16279;16280 18836;18837 18837 672 2 GAGYTFGQDISETFNHANGLTLVSR Unmodified 2654.2725 0.27249305 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 6.5 0.5 1 1 77.086 77.086 3 0.00010184 26902 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.633 36.1 0 0 0 12 19 0 0 0 0 12 19 0 0 0 0 1 1 0 10237 6950 1731;1787 6682 16281;16282 18838;18839 18839 2 GAHGGTAEQDPR Unmodified 1194.5378 0.53776229 1250 Q80UE5;O70318 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 2 0 1 18.162 18.162 3 0.00018193 2785 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.653 62.399 0 0 0 0 9.24 5.0663 0 0 0 0 9 5 0 0 0 0 1 1 478.7 6951 1250 6683 16283 18840 18840 1 GAHVTINAR Unmodified 937.50936 0.50936269 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7.5 0.5 1 1 28.756 28.756 3 0.016166 4907 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.066 6.3741 29.832 46.436 29.722 41.019 44.915 68.79 28 46 28 38 47 65 1 2 1 1 2 1 2940.6 6952 2154 6684 16284;16285 18841;18842 18841 2 GAIIGFLK Unmodified 817.50617 0.5061748 2603 Q8K341;B8JJ72 Atat1 Alpha-tubulin N-acetyltransferase 1 yes no 0 0 0 0 12 0 1 73.079 73.079 2 0.010412 18931 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.596 22.854 117.69 137.94 120.97 0 0 148.17 111 139 120 0 0 139 1 1 1 0 0 1 7516.8 6953 2603 6685 16286 18843 18843 1 GAIILAK Unmodified 684.45341 0.45341094 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 0 11.5 1.5 1 1 56.627 56.627 2 0.02025 14655 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.84 53.652 337.89 322.5 285.47 366.85 453.23 444.38 318 329 286 359 464 429 2 2 1 2 2 2 34068 6954 1449 6686 16287;16288 18844;18845 18844 2 GAILTTMLATR Oxidation (M) 1162.638 0.63799361 1475;1355;103 P11798;F8WIS9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2a;Camk2b;Camk2d Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 1 0 1 0 1 65.07 65.07 2 0.03725 21843 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 95.608 64.235 26.57 24.437 22.204 0 0 26.65 25 25 22 0 0 25 1 1 1 0 0 1 5307.8 6955 1355;1475;103 6687 16289 18846 18846 6 1 GAILTTMLATR Unmodified 1146.6431 0.64307898 1475;1355;103 P11798;F8WIS9;P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2a;Camk2b;Camk2d Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 0 0 5.57 5.34 4 1 1 1 70.006 70.006 2 3.1824E-33 23798 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 191.48 134.82 5789.3 3442.9 5972.8 3906.9 3834.7 6094.2 5440 3667 5895 3928 4029 5815 12 13 14 9 14 14 2599500 6956 1355;1475;103 6687 16290;16291;16292;16293;16294;16295;16296 18847;18848;18849;18850;18851;18852;18853;18854;18855;18856;18857;18858;18859;18860;18861;18862;18863;18864;18865;18866 18847 20 GAILTTMLATRNFSGGK Deamidation (N) 1737.9084 0.90835481 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 1 0 1 8.33 5.19 1 2 72.776 72.776 3;4 2.322E-08 18771 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.65 78.305 163.73 64.479 19.158 29.126 126.42 117.46 153 65 19 28 126 112 3 1 1 1 3 2 32659 6957 1355 6688 16297;16298;16299 18867;18868;18869 18869 426 3 GAILTTMLVSR Unmodified 1160.6587 0.65872905 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 6.5 5.5 1 1 70.798 70.798 2 2.0276E-16 24070 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 167.93 112.22 147.76 124.92 281.86 240.05 58.564 191.27 139 130 278 236 60 181 1 2 3 3 1 2 51448 6958 2818 6689 16300;16301 18870;18871;18872 18871 3 GAIQLGIGYTVGNLSSKPER Unmodified 2059.1062 0.10620299 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 1 7.33 4.5 1 1 1 68.176 68.176 3;4 1.4193E-13 19083 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 115.32 88.515 124.79 72.721 42.029 84.965 83.742 0 120 74 46 83 83 0 2 1 1 2 1 0 21164 6959 1044 6690 16302;16303;16304 18873;18874;18875 18875 3 GAIYSIPISEDGGGGSSTPEDPAEAPR Unmodified 2629.2144 0.21436905 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 5 0 1 66.203 66.203 3 0.063231 23559 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 22.917 14.925 0 29.152 38.285 0 19.874 0 0 28 37 0 19 0 0 1 1 0 1 0 4520 6960 2125 6691 16305 18876 18876 1 GALELEK Unmodified 758.41742 0.41741937 3435 yes yes 0 0 0 0 7.67 3.77 2 1 48.679 48.679 2 0.033052 15764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.843 7.2518 1070.9 985.15 778.95 1247.9 1787.8 1403 1007 1006 782 1215 1810 1364 3 3 2 3 3 3 113410 + 6961 3435 6692 16306;16307;16308 18877;18878;18879 18878 3 GALFGANANR Unmodified 989.50428 0.50427732 1597 P50518;A0A0N4SW07 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 0 10 0.707 1 2 1 46.072 46.072 2;3 5.976E-09 10161 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 153.73 95.039 541.69 317.36 686.6 387.84 554.85 565.44 510 328 669 401 563 544 5 4 5 5 5 5 159500 6962 1597 6693 16309;16310;16311;16312 18880;18881;18882;18883;18884;18885 18882 6 GALFGANANRK Unmodified 1117.5992 0.59924033 1597 P50518;A0A0N4SW07 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 1 11.2 1.17 2 1 1 1 42.714 42.714 3;4 5.6767E-08 7681 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.75 67.03 417.83 600.82 727.79 1290.1 872.16 1127.5 391 597 698 1267 892 1081 2 3 3 4 3 5 210000 6963 1597 6694 16313;16314;16315;16316;16317 18886;18887;18888;18889;18890;18891 18890 6 GALGEPSAPSAR Unmodified 1111.5622 0.56218613 2623 Q8QZT2 Ccsap Centriole, cilia and spindle-associated protein yes yes 0 0 0 0 4 0 1 39.786 39.786 2 0.0030876 11424 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.297 25.149 0 0 30.296 0 0 29.848 0 0 28 0 0 28 0 0 1 0 0 1 1709.5 6964 2623 6695 16318 18892 18892 1 GALKEPIQLPK Unmodified 1192.718 0.71795849 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7 Kalrn Kalirin yes no 0 0 0 1 9 0 1 58.411 58.411 3 0.015933 17122 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.343 31.81 119.1 0 0 0 73.742 106.63 111 0 0 0 74 102 1 0 0 0 1 1 4946.8 6965 545 6696 16319 18893 18893 1 GALLGEINAK Unmodified 984.5604 0.56039521 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 8 0 1 61.698 61.698 3 0.0062487 19424 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.563 30.049 59.91 35.328 0 30.604 0 0 56 37 0 28 0 0 1 1 0 1 0 0 2393.3 6966 581 6697 16320 18894 18894 1 GALLPLSLR Unmodified 938.5913 0.59130141 3063 Q9D4H1 Exoc2 Exocyst complex component 2 yes yes 0 0 0 0 11 0 1 69.326 69.326 2 0.0089068 19738 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.774 57.138 0 120 0 0 0 0 0 120 0 0 0 0 0 1 0 0 0 0 4946.4 6967 3063 6698 16321 18895 18895 1 GALLSLIEYYQWDK Unmodified 1697.8665 0.86647322 1104 G5E8H1 Gria2 no no 0 0 0 0 10 0 1 96.823 96.823 3 5.5713E-05 31763 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.543 64.915 0 0 9.738 0 13.632 29.459 0 0 9 0 14 28 0 0 1 0 1 1 4423.4 6968 1104 6699 16322 18896 18896 1 GALLWMK Unmodified 817.45203 0.45203074 749 S4R217;D3Z118;P97411;F7BG11;D3Z376;D3Z119;A0A087WSM1;Q3TY65 Ica1;Ica1l Islet cell autoantigen 1;Islet cell autoantigen 1-like protein yes no 0 0 0 0 12 0 1 71.492 71.492 2 0.035769 18295 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.672 35.247 79.402 0 0 48.737 81.95 76.546 74 0 0 46 83 74 1 0 0 1 1 1 6752 6969 749 6700 16323 18897 18897 1 GALNAIR Unmodified 713.41842 0.41842242 3297 Q9QZX7;Z4YMF3;A8Y5D6 Srr Serine racemase yes no 0 0 0 0 7 0 1 41.144 41.144 2 0.038071 10407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.833 15.286 88.542 102.56 0 99.074 136.91 114.42 83 102 0 93 139 111 1 1 0 1 1 1 9640.9 6970 3297 6701 16324 18898 18898 1 GALPEGVTSELECVTNSTLAAIIR Unmodified 2500.2843 0.28430329 2716 Q8VHI6 Wasf3 Wiskott-Aldrich syndrome protein family member 3 yes yes 0 0 0 0 8 0 1 103.56 103.56 3 2.0913E-05 36292 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.065 30.644 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6971 2716 6702 16325 18899 18899 1 GALPLDTVTFYK Unmodified 1323.7075 0.70745338 1649 P57759;F8WJI4;F8WIM7;D6RG87 Erp29 Endoplasmic reticulum resident protein 29 yes no 0 0 0 0 8.5 0.5 1 1 76.647 76.647 3 4.5465E-07 26463 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.29 72.405 49.128 45.631 0 97.984 194.88 103.17 46 46 0 93 194 102 1 1 0 2 2 2 17314 6972 1649 6703 16326;16327 18900;18901 18900 2 GALQNQK Unmodified 757.40825 0.40825167 468 A2AI19;A2AI20;A2AI21;P35438 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 7.5 0.5 1 1 34.237 34.237 2 0.016484 7252 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.81 58.104 29.754 125.66 64.197 45.979 52.415 117.9 28 121 65 46 56 112 1 2 1 1 2 2 5020.1 6973 468 6704 16328;16329 18902;18903 18902 2 GALQYLVPILTQTLTK Unmodified 1758.0291 0.029121869 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 13 0 1 102.35 102.35 3 6.3994E-06 41536 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.88 74.52 39.464 28.989 87.868 0 0 0 37 28 83 0 0 0 1 1 2 0 0 0 4679.4 6974 1798 6705 16330 18904;18905 18904 2 GALSALREEHR Unmodified 1237.6527 0.65273247 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;F6VV02 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 1 6 0 1 35.416 35.416 4 0.019955 8500 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.44 29.169 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 1342 6975 589 6706 16331 18906 18906 1 GALSASVFSEGQTLDSPWV Unmodified 1949.9371 0.93707198 2941 Q9CQT1 Mri1 Methylthioribose-1-phosphate isomerase yes yes 0 0 0 0 6 0 1 93.811 93.811 3 0.035449 35530 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.107 17.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6976 2941 6707 16332 18907 18907 1 GALVIVNDLGGDFK Unmodified 1416.7613 0.76127986 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 9.33 2.62 1 1 1 82.322 82.322 3 6.2077E-05 29794 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.987 47.506 49.009 38.413 115.81 63.26 46.907 39.442 46 37 112 65 46 37 1 1 2 2 1 1 7058.7 6977 1602 6708 16333;16334;16335 18908;18909;18910 18908 3 GALVLGSSLK Unmodified 943.57023 0.57023162 1150 K3W4S6;V9GX26;Q9R062 Gyg;Gyg1 Glycogenin-1 yes no 0 0 0 0 10.5 0.5 1 1 62.801 62.801 2 0.0033501 16773 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.95 40.963 87.999 91.335 220.67 84.719 0 127.92 83 93 222 83 0 120 1 1 2 1 0 1 21031 6978 1150 6709 16336;16337 18911;18912 18912 2 GALVLGYEGWLAGYQMNFETSK Unmodified 2433.1675 0.16748262 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 10.2 1.64 2 1 1 95.509 95.509 3;4 1.2172E-09 34147 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.887 50.252 0 38.792 35.364 38.163 26.187 48.846 0 37 33 37 28 46 0 2 2 2 2 2 9221.3 6979 978;2097 6710 16338;16339;16340;16341 18913;18914;18915;18916 18913 4 GANAVGYTNYPDNVVFK Unmodified 1827.8792 0.87916317 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 13 0 1 66.15 66.15 3 8.3668E-05 24155 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.872 39.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6980 974 6711 16342 18917 18917 1 GANESLER Unmodified 874.41446 0.41445926 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 2.5 0.5 1 1 29.033 29.033 2 0.0019852 6848 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 130.31 56.674 495.47 258.52 183.91 339.9 495.37 380.28 464 264 185 325 501 370 4 3 2 3 4 4 331660 6981 1557 6712 16343;16344 18918;18919;18920;18921 18920 4 GANFITQILLRPGASDLTGSFR Unmodified 2333.2492 0.24917883 534 A2BDX2;O70152 Dpm1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 1 12 0 1 85.623 85.623 3 0.010865 23999 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 34.685 19.915 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6982 534 6713 16345 18922 18922 1 GANIHMSTK Unmodified 957.4702 0.4702 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 9 0 1 35.996 35.996 3 0.033999 7179 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.512 24.732 0 50.008 0 40.441 0 0 0 47 0 37 0 0 0 1 0 1 0 0 1131.7 6983 3449;3451;3452 6714 16346 18923 18923 1 GANPVEIR Unmodified 854.46102 0.46101552 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 9.5 3.5 1 1 39.429 39.429 2 8.1474E-26 11040 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 156.4 82.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6984 1766 6715 16347;16348 18924;18925 18925 2 GANQWIK Unmodified 815.42899 0.42898711 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 50.744 50.744 2 0.024948 14444 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.21 34.954 422.26 296.36 373.43 327.62 252.68 386.36 397 303 369 315 250 367 3 2 2 2 2 2 135340 6985 1520 6716 16349;16350;16351 18926;18927;18928 18926 3 GANSSSGNPLVYLDVGADGQPLGR Deamidation (N) 2344.1295 0.12951721 2849 Q99KR7 Ppif Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 1 0 0 5 0 1 78.727 78.727 3 2.3877E-07 29536 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.447 44.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6986 2849 6717 16352 18929 18929 1014 1 GAPEGVIDR Unmodified 912.46649 0.46649483 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 3 0 1 39.846 39.846 2 0.008865 12035 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.827 14.822 148.29 47.855 103.5 72.832 100.04 96.283 139 56 102 74 102 93 1 1 1 1 1 1 22370 6987 1242 6718 16353 18930 18930 1 GAPLNTPVTEDR Unmodified 1268.6361 0.63607935 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 45.82 45.82 2 2.8943E-09 14258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.08 71.991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6988 2244 6719 16354;16355 18931;18932 18931 2 GAPLVVICQGK Unmodified 1140.6325 0.6325143 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 10 1.87 1 1 1 1 60.703 60.703 2;3 4.3231E-33 19041 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 189.14 154.75 226.68 126.22 207.52 100.76 258.43 287.13 213 130 204 102 260 278 2 1 2 1 3 4 43103 6989 836 6720 16356;16357;16358;16359 18933;18934;18935;18936 18933 4 GAPPGYRPSAWVHLLHQLPR Unmodified 2251.2127 0.21267417 3058 Q9D3A9;A0A0U1RPY1;D6RG66 Ttyh1 Protein tweety homolog 1;Protein tweety homolog yes no 0 0 0 1 12 0 1 62.505 62.505 5 0.01821 15189 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.666 18.412 20.244 28.427 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 0 2118 6990 3058 6721 16360 18937 18937 1 GAPPSSNIEDFHGLLPK Unmodified 1777.8999 0.89989861 2602 Q8K310;A0A087WSU2;A0A087WNW7 Matr3 Matrin-3 yes no 0 0 0 0 6 0 2 65.498 65.498 3;4 6.1616E-06 22635 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.439 64.79 98.477 63.555 166.65 0 133.63 38.106 93 65 158 0 129 37 2 1 2 0 2 1 12456 6991 2602 6722 16361;16362 18938;18939 18939 2 GAPTTSLVSVAVTK Unmodified 1329.7504 0.75038083 3122 Q9DBF1;G3UYR8;G3UY72 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 9 0 1 63.635 63.635 2 0.00042066 19628 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.766 56.574 69.174 23.861 75.762 56.693 0 49.036 65 28 74 56 0 46 1 1 1 1 0 1 3541.4 6992 3122 6723 16363 18940 18940 1 GAQAAIVVYDITNQETFAR Unmodified 2066.0433 0.043268383 1683 P61021 Rab5b Ras-related protein Rab-5B yes yes 0 0 0 0 8.67 3.09 1 1 1 78.472 78.472 3 2.2576E-08 30009 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.596 59.945 158.63 135.04 129.09 112.82 109.45 105.61 149 139 130 111 111 102 2 3 2 2 2 2 13921 6993 1683 6724 16364;16365;16366 18941;18942;18943 18943 3 GAQAAIVVYDITNTDTFAR Unmodified 2025.0167 0.016719282 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 0 0 0 7 0 1 79.761 79.761 3 3.042E-05 28571 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.49 40.077 48.775 0 97.934 54.899 25.107 48.32 46 0 93 56 28 46 1 0 1 1 1 1 5013.6 6994 1514 6725 16367 18944 18944 1 GAQENGTGQATSR Deamidation (N) 1276.5644 0.56437097 2172 Q64314 Cd34 Hematopoietic progenitor cell antigen CD34 yes yes 0 1 0 0 1 0 2 23.049 23.049 2 7.6932E-11 3869 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.067 60.124 9.6251 0 5.3615 0 9.414 0 9 0 5 0 9 0 1 0 1 0 1 0 3008.7 6995 2172 6726 16368;16369 18945;18946 18946 850 2 GAQEVGER Unmodified 844.40389 0.40389457 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0.816 1 1 1 24.875 24.875 2 0.016998 4837 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.787 14.714 69.378 39.539 77.908 28.607 75.615 44.286 65 42 74 28 75 42 2 2 2 1 3 1 34741 6996 3266 6727 16370;16371;16372 18947;18948;18949 18948 3 GAQGVILVYDVTR Unmodified 1389.7616 0.76161421 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 7.5 0.5 1 1 68.599 68.599 2;3 0.002804 23323 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.276 27.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6997 1518 6728 16373;16374 18950;18951 18950 2 GAQLAAENLGISLASLLLNK Unmodified 1995.1364 0.13644049 1437 P22907 Hmbs Porphobilinogen deaminase yes yes 0 0 0 0 11.3 0.471 2 1 107.13 107.13 3;4 3.2932E-13 35195 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.56 85.628 0 41.824 44.017 9.6683 8.9699 29.848 0 40 43 9 9 28 0 2 2 1 1 2 5029.3 6998 1437 6729 16375;16376;16377 18952;18953;18954 18952 3 GAQNADCPK Unmodified 959.41308 0.41307905 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 5 0 1 30.333 30.333 2 0.0011383 6561 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.61 52.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6999 2487 6730 16378 18955 18955 1 GASEILLK Unmodified 829.49092 0.49091866 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 7 1 1 1 57.617 57.617 2 0.01246 18571 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.296 0 292.31 179.35 312.48 215.96 254.4 192.07 275 192 309 219 259 184 2 2 2 2 2 1 18823 7000 487 6731 16379;16380 18956;18957 18956 2 GASEILLKK Unmodified 957.58588 0.58588168 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 1 8 0 1 52.82 52.82 3 0.011268 15167 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.159 0 108.26 69.09 140.32 120.89 101.14 0 102 74 139 120 102 0 1 1 1 1 1 0 7310.9 7001 487 6732 16381 18958 18958 1 GASEIVLK Unmodified 815.47527 0.4752686 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 9.5 3.5 1 1 53.229 53.229 2 0.01987 17734 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.324 17.428 99.426 119.21 105.67 151.89 190.35 163 93 120 102 148 194 158 1 2 1 2 2 2 19501 7002 1042 6733 16382;16383 18959;18960 18960 2 GASGSGPTIEEVD Unmodified 1217.5412 0.54117591 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 2 0.816 1 1 1 51.576 51.576 2 6.0063E-08 16879 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.7 96.092 69.311 93.831 26.766 78.753 47.226 78.346 65 93 28 74 47 74 2 3 1 3 2 2 61211 7003 1407 6734 16384;16385;16386 18961;18962;18963;18964 18962 4 GASGVELWANK Unmodified 1130.572 0.57202253 1587 P49442 Inpp1 Inositol polyphosphate 1-phosphatase yes yes 0 0 0 0 7 0 1 61.39 61.39 2 0.0018529 19918 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.869 14.057 39.701 0 0 71.045 0 49.036 37 0 0 65 0 46 1 0 0 1 0 1 3519.2 7004 1587 6735 16387 18965 18965 1 GASHEQAAAALK Unmodified 1152.5887 0.58873523 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 6 0 1 34.866 34.866 3 0.00010242 8273 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.479 65.236 99.188 51.943 56.975 0 83.862 86.085 93 56 56 0 83 83 1 1 1 0 1 1 8659.3 7005 690 6736 16388 18966 18966 1 GASHTLK Unmodified 712.38679 0.38678794 3035 Q9D154;Z4YK03;Q5SV42 Serpinb1a;Serpinb1c Leukocyte elastase inhibitor A;Leukocyte elastase inhibitor C yes no 0 0 0 0 7 0 1 28.364 28.364 3 0.011382 4716 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.415 36.177 0 54.264 0 0 81.176 42.456 0 51 0 0 79 42 0 1 0 0 1 1 2909.9 7006 3035 6737 16389 18967 18967 1 GASIAHCPNSNLSLSSGLLNVLEVLK Unmodified 2692.4218 0.42179983 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 9 0 1 91.899 91.899 4 2.8165E-21 32563 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.168 73.708 0 59.441 8.5336 0 77.404 39.442 0 56 9 0 74 37 0 2 1 0 1 1 3436.6 7007 3307 6738 16390 18968;18969 18968 2 GASIVEDK Unmodified 817.41815 0.41814765 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 45.342 45.342 2 0.001189 13787 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.15 44.852 1889.9 1410.2 1870.1 1335.7 2231.3 1928.7 1778 1446 1865 1318 2227 1869 4 4 4 4 4 5 197890 7008 1458 6739 16391;16392;16393;16394 18970;18971;18972;18973;18974 18971 5 GASIVEDKLVEDLK Unmodified 1514.8192 0.81918867 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 9.5 3.5 1 1 73.508 73.508 3 0.00021816 26485 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.729 46.959 167.79 113.08 196.77 147.9 113.75 144.93 158 120 195 148 120 139 1 1 1 1 1 1 12109 7009 1458 6740 16395;16396 18975;18976 18975 2 GASLLLYHR Unmodified 1028.5767 0.57671398 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 no no 0 0 0 0 9 0 1 49.387 49.387 3 0.00040575 12822 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.933 59.271 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7010 965 6741 16397 18977 18977 1 GASPHATAK Unmodified 838.42972 0.42971539 3449;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 24.883 24.883 3 0.0041938 4013 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.816 29.008 29.882 32.033 0 39.509 49.529 58.283 28 32 0 37 51 56 1 1 0 1 1 1 2415 7011 3449;3452 6742 16398 18978 18978 1 GASPVPESSLTADLLSVDAFAAPSPASTASPAK Unmodified 3111.5612 0.56118966 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 7.5 2.63 1 2 1 1 1 89.497 89.497 3;4;5 1.1332E-15 34130 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.109 57.431 109.76 67.185 140.36 41.539 114.06 84.497 103 65 134 42 112 80 5 2 5 2 4 4 48191 7012 2129 6743 16399;16400;16401;16402;16403;16404 18979;18980;18981;18982;18983;18984;18985 18979 7 GASQSLWDVFAFSFK Unmodified 1688.8199 0.81985737 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 99.066 99.066 3 2.7631E-05 32640 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.833 50.598 19 14.896 0 35.536 28.359 37 19 14 0 33 28 37 1 1 0 2 1 1 12982 7013 1226 6744 16405;16406;16407;16408 18986;18987;18988;18989;18990 18987 5 GASSSSGVVVQVR Unmodified 1231.6521 0.65206377 257 A0A1B0GS08;J3QP43;Q0VBF8 6330403A02Rik Protein stum homolog yes no 0 0 0 0 7.83 3.72 1 1 1 1 1 1 40.975 40.975 2;3 1.3642E-15 10337 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.29 82.984 14.904 57.274 78.04 43.729 21.772 43.085 14 56 74 42 23 41 1 3 2 2 1 2 9129.1 7014 257 6745 16409;16410;16411;16412;16413;16414 18991;18992;18993;18994;18995;18996 18993 6 GATDVDR Unmodified 732.34023 0.34023168 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 0 2 0 1 24.27 24.27 2 0.025329 4624 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.75 39.261 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 6724.4 7015 1547 6746 16415 18997 18997 1 GATPYGGVK Unmodified 848.43922 0.43921744 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 42.611 42.611 2 0.00035659 10379 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 127.56 71.889 901.33 987.97 1082.6 339.54 1120.4 1155.3 850 1002 1065 336 1124 1111 3 4 4 3 5 4 96958 7016 2622 6747 16416;16417;16418;16419;16420 18998;18999;19000;19001;19002;19003 19000 6 GATQQILDEAER Unmodified 1329.6525 0.6524577 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 5.5 4.39 1 1 1 1 52.403 52.403 2;3 1.0109E-59 17813 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 209.19 149.17 201.65 201.38 228.43 107.61 244.94 215.8 190 204 226 111 245 209 3 3 3 2 3 4 55131 7017 1823 6748 16421;16422;16423;16424 19004;19005;19006;19007 19005 4 GATSIVYR Unmodified 865.46577 0.46576654 1328 Q8BGR3;P08414 Camk4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 0 6 0 1 41.645 41.645 2 0.045149 11460 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.21 26.051 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7018 1328 6749 16425 19008 19008 1 GATVVTGGK Unmodified 788.43922 0.43921744 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 40.351 40.351 2;3 0.0011455 9252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.52 61.171 127.73 190.33 192.27 28.065 144.06 213.35 121 186 190 28 144 204 3 2 3 1 2 3 30431 7019 2469 6750 16426;16427;16428 19009;19010;19011 19010 3 GAVATELLQLAK Unmodified 1212.7078 0.70778773 3424 yes no 0 0 0 0 10 0 1 48.701 48.701 3 0.0038234 11175 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.401 5.9826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 7020 3424 6751 16429 19012 19012 1 GAVDAAVPTNIIAAK Unmodified 1409.7878 0.78782897 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 8.25 2.77 1 2 1 66.717 66.717 2;3 8.6834E-11 24254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.53 68.801 137.69 147.35 218.68 165.5 212.35 211.98 130 148 213 167 214 203 3 3 3 4 3 3 62230 7021 65 6752 16430;16431;16432;16433 19013;19014;19015;19016 19016 4 GAVDIPAAASFK Unmodified 1145.6081 0.60807369 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 7 0 1 64.947 64.947 2 0.00017378 21551 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.548 33.981 0 28.989 48.033 0 37.054 47.979 0 28 46 0 37 46 0 1 1 0 1 1 3125.5 7022 2977 6753 16434 19017 19017 1 GAVECCPNCR Unmodified 1221.4689 0.46889614 1765 P63037;B1AXY1;B1AXY0 Dnaja1 DnaJ homolog subfamily A member 1 yes no 0 0 0 0 4 0 1 30.003 30.003 2 0.0036672 6925 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.26 61.412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7023 1765 6754 16435 19018 19018 1 GAVEIIFK Unmodified 875.51165 0.5116541 2873 Q99MN9;E9Q1J7 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 8 0 1 69.633 69.633 2 0.0053565 23126 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.7 24.146 49.358 0 0 0 86.818 0 46 0 0 0 83 0 1 0 0 0 1 0 3795 7024 2873 6755 16436 19019 19019 1 GAVGALLVYDIAK Unmodified 1288.7391 0.73908786 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;G3UZL4 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 81.421 81.421 2;3 2.1941E-11 28030 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.1 89.571 49.773 134.79 101.66 118.08 56.581 58.081 47 130 102 111 56 56 2 3 3 3 1 1 29556 7025 1556 6756 16437;16438;16439;16440;16441;16442 19020;19021;19022;19023;19024;19025;19026 19021 7 GAVHQLCQSLAGK Unmodified 1367.698 0.6979681 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;A0A0G2JGY0 Qdpr Dihydropteridine reductase yes no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 49.561 49.561 2;3 1.075E-11 11286 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.46 84.159 222.84 232.67 89.762 468.37 244.18 375.73 209 232 87 445 253 359 3 2 3 5 2 4 55566 7026 2464 6757 16443;16444;16445;16446;16447;16448 19027;19028;19029;19030;19031;19032 19030 6 GAVLAAVSSHK Unmodified 1038.5822 0.58219329 1 A0A067XG53;O70589;F6ZQR2 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 0 10 0 1 48.579 48.579 3 1.1418E-08 11135 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.06 63.332 0 76.852 112.71 62.463 99.161 135.75 0 74 111 65 102 130 0 1 1 1 1 1 9320.6 7027 1 6758 16449 19033 19033 1 GAVLFGLDPAVIK Unmodified 1298.7598 0.7598233 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 11 1.41 1 1 1 1 1 84.018 84.018 3 2.4103E-05 26633 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.39 60.666 217.46 231.67 131.63 163.64 148.34 115.2 204 233 130 158 148 111 4 5 2 3 3 2 123010 7028 2585 6759 16450;16451;16452;16453;16454 19034;19035;19036;19037;19038;19039;19040 19036 7 GAVLVCDMSSNFLSRPVDVSK Unmodified 2280.1242 0.1242376 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 1 8 0 1 74.26 74.26 3 0.010681 25308 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.237 27.316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7029 2840 6760 16455 19041 19041 1 GAVPYVQAFDSLLANPVAEYLK Unmodified 2364.2365 0.23654846 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 0 0 0 0 9.29 2.05 2 1 1 1 1 1 104.42 104.42 3;4 1.8173E-27 36370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.26 101.37 67.152 104.45 108.88 41.034 80.826 124.08 63 103 105 40 79 118 5 7 8 3 4 5 61134 7030 1536 6761 16456;16457;16458;16459;16460;16461;16462 19042;19043;19044;19045;19046;19047;19048;19049;19050;19051;19052 19044 11 GAVSAEQVIAGFNR Unmodified 1417.7314 0.73137672 1261 O70591;F8WJ30 Pfdn2 Prefoldin subunit 2 yes no 0 0 0 0 7.5 0.5 1 1 66.32 66.32 2;3 7.4303E-05 22207 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.169 60.564 30.044 0 48.137 77.14 46.43 29.848 28 0 46 74 46 28 1 0 1 2 1 1 9106.4 7031 1261 6762 16463;16464 19053;19054 19053 2 GAVSNATHTSDR Unmodified 1214.564 0.56397704 2111 Q61140 Bcar1 Breast cancer anti-estrogen resistance protein 1 yes yes 0 0 0 0 4 0 1 22.28 22.28 3 0.013368 3641 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.357 26.226 14.868 8.2574 18.906 0 0 0 14 9 18 0 0 0 1 1 1 0 0 0 932.51 7032 2111 6763 16465 19055 19055 1 GAVSSALYMAWLEALSK Unmodified 1795.9179 0.91785686 961 E9QM38;P55012 Slc12a2 Solute carrier family 12 member 2 yes no 0 0 0 0 12 0 1 100.73 100.73 3 0.035192 28575 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 32.387 11.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7033 961 6764 16466 19056 19056 1 GAVVAGSR Unmodified 715.39769 0.39768698 1460 Q8C483;P26638 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 7.5 0.5 1 1 27.75 27.75 2 0.01422 4538 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.813 29.722 56.278 67.191 81.728 35.893 54.491 97.583 53 68 81 37 56 93 1 2 2 1 1 2 5564.9 7034 1460 6765 16467;16468 19057;19058 19057 2 GAVWGATLNK Unmodified 1015.5451 0.5450795 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 0 9.5 0.5 1 1 60.045 60.045 2 1.1516E-08 16005 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 150.36 95.953 73.096 87.296 166.35 74.641 214.67 136.72 69 88 162 74 213 134 1 1 2 1 2 2 20446 7035 3388 6766 16469;16470 19059;19060 19060 2 GAVWGATLNK Deamidation (N) 1016.5291 0.52909508 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 1 0 0 9 0 1 60.284 60.284 3 0.046341 17921 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.536 15.283 107.85 158.61 133.64 150.47 177.18 0 102 158 139 148 176 0 1 1 1 1 1 0 184820 7036 3388 6766 16471 19061 19061 1141 1 GAVYSFDPVGSYQR Unmodified 1544.726 0.72595699 413 A0A338P7C0;O09061;A0A338P7F1 Psmb1 Proteasome subunit beta type-1 yes no 0 0 0 0 7 0.816 1 1 1 63.209 63.209 2;3 1.6406E-20 21630 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.89 101.68 119.48 24.672 95.992 57.275 46.477 87.152 112 28 93 56 46 83 2 1 2 1 1 2 15195 7037 413 6767 16472;16473;16474 19062;19063;19064 19062 3 GAWSNVLR Unmodified 901.477 0.47699993 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 11 1.58 1 1 1 1 55.256 55.256 2 0.0021605 13904 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.47 56.142 1577.6 783.9 2042.1 1161.2 1232.5 1442.2 1484 816 1986 1165 1273 1382 3 2 5 4 4 4 422140 7038 1585;1607 6768 16475;16476;16477;16478 19065;19066;19067;19068;19069 19067 5 GAYDAQGTLSK Unmodified 1109.5353 0.53530267 991 F6RT34;F6VME3;F7A0B0;F6ZIA4 Mbp yes no 0 0 0 0 7.3 2.76 3 3 1 1 1 1 46.98 46.98 2;3 1.3921E-17 14395 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 170.52 102.96 1095.3 1163.8 935.62 799.14 2049.5 1604.8 1031 1176 963 808 2048 1557 8 8 8 8 11 9 476810 7039 991 6769 16479;16480;16481;16482;16483;16484;16485;16486;16487;16488 19070;19071;19072;19073;19074;19075;19076;19077;19078;19079;19080 19080 11 GAYGSVNK Unmodified 794.39227 0.39226725 1567 P47809;B1ATL6 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 0 7.5 0.5 1 1 38.629 38.629 2 0.0012879 9309 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 141.78 94.715 83.737 131.08 95.436 121.1 0 217.46 79 130 97 116 0 204 1 2 1 2 0 2 11023 7040 1567 6770 16489;16490 19081;19082 19081 2 GAYGVVEK Unmodified 821.42832 0.42831841 1804 P70236;A2AGS2;A0A0R4J1Q6;O09110 Map2k6;Map2k3 Dual specificity mitogen-activated protein kinase kinase 6;Dual specificity mitogen-activated protein kinase kinase 3 yes no 0 0 0 0 7 0 1 47.144 47.144 2 0.014908 13133 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.568 43.581 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 4279.8 7041 1804 6771 16491 19083 19083 1 GAYIYNTLMEFIR Unmodified 1589.7912 0.79119978 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 12 0 1 97.079 97.079 3 0.033698 27741 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.366 24.703 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 714.35 7042 3032 6772 16492 19084 19084 1 GAYTLVTFSAK Unmodified 1156.6128 0.61282471 1821 P70699 Gaa Lysosomal alpha-glucosidase yes yes 0 0 0 0 11 1 1 1 67.811 67.811 2;3 2.4908E-05 19467 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.26 50.675 0 19.059 69.186 0 0 0 0 19 65 0 0 0 0 1 1 0 0 0 3156.2 7043 1821 6773 16493;16494 19085;19086 19085 2 GAYVPSSPTR Unmodified 1033.5193 0.51925868 2326 Q80W47 Wipi2 WD repeat domain phosphoinositide-interacting protein 2 yes yes 0 0 0 0 7 0 1 39.541 39.541 2 0.013383 9663 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.582 38.059 20.064 18.214 38.84 0 0 20.254 19 19 37 0 0 19 1 1 1 0 0 1 1677.7 7044 2326 6774 16495 19087 19087 1 GCAFVTFSTR Unmodified 1144.5335 0.53352853 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2S7 Celf2 CUGBP Elav-like family member 2 yes no 0 0 0 0 10 0 1 57.38 57.38 2 0.0051519 14879 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.221 56.231 39.58 0 20.358 0 37.714 28.772 37 0 19 0 37 28 1 0 1 0 1 1 2625.6 7045 220 6775 16496 19088 19088 1 GCALQCAILSPAFK Unmodified 1534.7636 0.76360482 1957;1581;2137 Q3U2G2;Q61316;P48722;E0CY23;Q61699;E9Q0U7 Hspa4;Hspa4l;Hsph1 Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L;Heat shock protein 105 kDa no no 0 0 0 0 10.6 1.62 2 1 1 1 73.093 73.093 2;3 6.5779E-18 24110 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.68 89.074 476.71 134.65 557.84 461.46 296.28 625.82 448 139 542 454 308 595 4 2 3 3 1 4 141570 7046 1957;1581;2137 6776 16497;16498;16499;16500;16501 19089;19090;19091;19092;19093 19090 5 GCAQALR Unmodified 774.38066 0.38065671 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 5 0 1 28.649 28.649 2 0.026988 5836 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.703 62.536 49.011 0 58.33 45.232 83.467 37.06 46 0 56 46 83 37 1 0 1 1 1 1 5897 7047 1594 6777 16502 19094 19094 1 GCCAALK Unmodified 778.34658 0.34657939 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 9.33 2.62 1 1 1 38.888 38.888 2 0.0086474 8714 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.05 65.895 241.65 298.93 373.29 420.07 134.59 440.68 227 292 380 407 139 417 2 2 3 3 1 3 42794 7048 2298;1040 6778 16503;16504;16505 19095;19096;19097 19096 3 GCCFVTFYTR Unmodified 1309.5584 0.55836308 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2L5;S4R2J2;A3KGT0;A0A0R4J0T5;P28659 Celf2;Celf1 CUGBP Elav-like family member 2;CUGBP Elav-like family member 1 yes no 0 0 0 0 9.5 0.5 1 1 62.812 62.812 2 0.0029649 17228 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.623 60.101 108.78 43.689 74.672 86.161 63.816 116.5 102 46 74 84 65 111 2 1 1 2 1 2 10423 7049 220 6779 16506;16507 19098;19099 19099 2 GCDVVVIPAGVPR Unmodified 1337.7126 0.71255553 1327 P08249;A0A0G2JF23 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 8.14 3.23 2 1 1 1 2 61.829 61.829 2;3 2.3942E-60 20977 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 210.64 185.8 876.05 711.21 323.4 572.21 713.39 830.07 821 724 322 549 727 796 9 9 5 7 7 8 329180 7050 1327 6780 16508;16509;16510;16511;16512;16513;16514 19100;19101;19102;19103;19104;19105;19106;19107;19108;19109 19103 10 GCEVVVSGK Unmodified 933.45897 0.45896661 1755 P62908;D3YV43 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 5.5 0.5 1 1 44.394 44.394 2 0.0017661 12715 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.71 75.918 29.518 36.416 57.532 16.294 55.502 67.706 28 37 56 19 56 65 1 1 1 1 1 1 2220.4 7051 1755 6781 16515;16516 19110;19111 19111 2 GCFECCIK Unmodified 1072.414 0.41400702 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 0 6.5 0.5 1 1 51.46 51.46 3 0.0024318 16022 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.55 70.279 0 58.672 54.559 95.826 136.7 125.09 0 56 56 93 139 121 0 1 1 2 2 2 11825 7052 1526 6782 16517;16518 19112;19113 19112 2 GCGEVNGVNGGVAPSVEAFDK 2 Deamidation (N) 2063.9106 0.91059923 2996 Q9CYT6;D3YTR7 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 2 0 0 4 0 2 67.219 67.219 3 5.7374E-06 24345 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.761 44.076 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 5991.4 7053 2996 6783 16519;16520 19114;19115 19115 1039;1040 2 GCIENVIYNR Unmodified 1236.5921 0.59210605 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 6 0 1 55.064 55.064 2 0.0029594 17795 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.647 34.289 59.583 34.42 55.648 57.891 0 59.696 56 37 56 56 0 56 1 1 1 1 0 1 4606.9 7054 1226 6784 16521 19116 19116 1 GCIHDNR Unmodified 870.37663 0.37663396 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 4.5 0.5 1 1 18.274 18.274 3 0.0064941 2520 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.801 7.2091 9.5993 0 9.6896 20.691 4.0272 16.941 9 0 9 19 5 16 1 0 1 1 1 2 2613.5 7055 2226 6785 16522;16523 19117;19118 19117 2 GCILTLVER Unmodified 1059.5747 0.57466507 2639 Q8R1B4 Eif3c Eukaryotic translation initiation factor 3 subunit C yes yes 0 0 0 0 8 0 1 66.124 66.124 2 0.011739 21476 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.208 26.642 88.31 61.978 73.435 55.423 74.858 0 83 65 74 56 74 0 1 1 1 1 1 0 3842.3 7056 2639 6786 16524 19119 19119 1 GCITIIGGGDTATCCAK Unmodified 1753.7797 0.77972517 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 8.25 3.53 1 1 1 1 1 1 1 1 58.71 58.71 3 3.2378E-46 18698 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 170.95 152.16 325.6 259.3 383.29 423.52 442.36 380.47 306 264 384 416 454 367 3 4 5 6 6 5 90711 7057 1334 6787 16525;16526;16527;16528;16529;16530;16531;16532 19120;19121;19122;19123;19124;19125;19126;19127 19122 8 GCLLYGPPGTGK Unmodified 1218.6067 0.60669348 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 9 0.816 1 1 1 58.907 58.907 2;3 1.4074E-07 17442 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.29 71.204 108.67 89.64 55.082 57.925 58.576 69.29 102 92 56 56 56 65 2 2 1 1 1 1 13072 7058 1726 6788 16533;16534;16535 19128;19129;19130 19129 3 GCLTFVSK Unmodified 910.45824 0.45823833 3303 Q9R0Q6 Arpc1a Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 0 10 1.63 1 2 1 1 1 57.829 57.829 2;3 0.0012812 16898 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.39 88.673 1382.1 1279.3 788.73 1019.1 863.98 1070.4 1301 1300 806 989 888 1033 5 4 2 3 3 4 158580 7059 3303 6789 16536;16537;16538;16539;16540;16541 19131;19132;19133;19134;19135;19136 19133 6 GCSFLPDPYQK Unmodified 1310.5965 0.59652272 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 8.75 2.63 2 1 2 1 2 65.134 65.134 2;3 2.9755E-13 23446 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.61 115.72 420.48 251.63 400.48 356.32 785.39 559.7 394 241 390 348 780 544 6 4 5 3 7 6 119930 7060 859 6790 16542;16543;16544;16545;16546;16547;16548;16549 19137;19138;19139;19140;19141;19142;19143;19144;19145 19144 9 GCSQDDECVSLR Unmodified 1424.566 0.56602723 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 2.5 0.5 1 1 39.71 39.71 2 1.663E-05 11747 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 101.72 84.333 9.5582 28.345 48.023 0 28.62 58.879 9 28 46 0 28 56 1 2 2 0 1 2 4889.7 7061 784 6791 16550;16551 19146;19147 19146 2 GCSYFYSYPAVCDFLQHNNLLSILR Unmodified 3036.4262 0.42623328 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 11.3 1.25 1 1 1 97.29 97.29 3;4 2.0042E-11 31702 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.68 56.687 20.292 18.848 20.558 0 24.058 29.848 19 19 19 0 23 28 1 1 1 0 1 1 8669.2 7062 1786 6792 16552;16553;16554 19148;19149;19150;19151 19150 4 GCTATLGNFAK Unmodified 1138.5441 0.54409322 1449 P25444;D3YVC1;D3YWJ3 Rps2 40S ribosomal protein S2 yes no 0 0 0 0 8 0.816 1 1 1 54.937 54.937 2 2.5553E-07 16874 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.775 58.299 59.862 0 38.032 38.174 0 39.442 56 0 37 37 0 37 1 0 1 1 0 1 4128.4 7063 1449 6793 16555;16556;16557 19152;19153;19154 19152 3 GCTFLVGLIQK Unmodified 1234.6744 0.67437911 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 9.25 4.82 1 1 1 1 78.94 78.94 3 0.00016385 24118 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.095 53.368 59.015 78.736 0 161.76 77.404 56 55 74 0 148 74 56 1 1 0 1 1 1 40793 7064 1155 6794 16558;16559;16560;16561 19155;19156;19157;19158 19156 4 GCTVWLTGLSGAGK Unmodified 1405.7024 0.70238478 2099 Q6NZM8;Q60967;O88428 Papss1;Papss2 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase;Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 0 10 0 1 71.217 71.217 3 0.0015197 21070 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.724 35.885 39.701 0 0 0 94.991 66.579 37 0 0 0 93 65 1 0 0 0 1 1 6163.3 7065 2099 6795 16562 19159 19159 1 GCVGNTNIWK Unmodified 1147.5444 0.54442757 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 9 0 1 55.508 55.508 2 0.0059118 15772 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.173 35.869 0 48.181 45.639 27.884 0 59.696 0 46 46 28 0 56 0 1 1 1 0 1 2738.2 7066 468 6796 16563 19160 19160 1 GCVPAFHGIVER Unmodified 1340.6659 0.66593969 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 7 0 1 49.94 49.94 3 0.0019581 14442 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.938 39.118 156.81 143.33 213.24 175.88 317.32 271.3 148 148 213 178 320 263 1 1 1 1 1 1 6825.6 7067 2629 6797 16564 19161 19161 1 GCVVGTK Unmodified 719.36361 0.36360966 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 0 7.5 0.5 1 1 38.583 38.583 2 0.026678 8475 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.139 44.614 0 38.473 53.525 106.82 134.25 106.5 0 37 56 102 139 102 0 1 1 1 2 1 12925 7068 1467 6798 16565;16566 19162;19163 19163 2 GCWDSIHVVEVQEK Unmodified 1684.7879 0.78790532 495;1565 A2AMW0;F7CAZ6;P47757 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 6 0.816 1 1 1 60.389 60.389 3 5.632E-05 20952 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.669 37.988 156.78 193.97 175.63 53.26 184.47 191.95 148 195 176 56 185 185 2 2 2 1 2 2 19757 7069 495;1565 6799 16567;16568;16569 19164;19165;19166 19164 3 GDAAVYCYQAEAGEWR Unmodified 1844.7788 0.7787972 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 3 0 1 61.36 61.36 3 0.0089699 21799 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.412 30.142 0 29.478 18.789 0 8.3971 29.608 0 28 19 0 9 28 0 1 1 0 1 1 1659.9 7070 2438 6800 16570 19167 19167 1 GDAEEMAQR Unmodified 1005.4186 0.41855836 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 1 0 1 32.306 32.306 2 0.00017359 7813 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 131.41 102.51 49.358 0 0 29.351 66.642 0 46 0 0 28 65 0 1 0 0 1 1 0 4577.6 7071 1250 6801 16571 19168 19168 1 GDAFDFNVSLQDHFK Unmodified 1738.7951 0.79509919 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 6 0 2 71.853 71.853 3;4 2.1864E-05 25678 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.463 56.139 59.298 44.418 95.188 55.535 0 79.95 56 47 93 56 0 75 2 2 2 2 0 2 8256 7072 2960 6802 16572;16573 19169;19170 19169 2 GDAGADEAVPR Unmodified 1056.4836 0.48360145 603 B1AXV0;F6Q3S1 Frrs1l DOMON domain-containing protein FRRS1L yes no 0 0 0 0 2 0.816 1 1 1 35.076 35.076 2 2.6616E-06 9618 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.058 70.91 118.11 0 167.64 61.054 0 148.17 111 0 158 65 0 139 1 0 1 1 0 1 24411 7073 603 6803 16574;16575;16576 19171;19172;19173 19172 3 GDAGEQEEK Unmodified 961.39887 0.39886877 2630 Q8R0A7 Kiaa0513 Uncharacterized protein KIAA0513 yes yes 0 0 0 0 1.5 0.5 1 1 30.381 30.381 2 0.0044923 6906 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.624 51.524 88.042 123.78 66.043 138.15 0 59.696 83 120 74 130 0 56 2 1 2 2 0 1 10770 7074 2630 6804 16577;16578 19174;19175 19174 2 GDAGEQEEKR Unmodified 1117.5 0.4999798 2630 Q8R0A7 Kiaa0513 Uncharacterized protein KIAA0513 yes yes 0 0 0 1 2.5 0.5 1 1 25.801 25.801 3 0.0012368 5394 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.958 43.563 48.605 64.685 126.17 232.63 191.03 65.653 46 65 130 223 195 65 1 1 2 2 2 1 16266 7075 2630 6805 16579;16580 19176;19177 19176 2 GDAPAAEAEAK Unmodified 1028.4775 0.47745344 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 3 0 1 38.677 38.677 2 1.119E-07 11456 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.71 64.862 20.147 47.585 0 40.441 0 39.442 19 46 0 37 0 37 1 1 0 1 0 1 4360.6 7076 1318 6806 16581 19178 19178 1 GDARPAEIDSLWEISK Unmodified 1785.8897 0.88972785 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 1 5.33 0.471 2 1 69.905 69.905 3;4 0.0046062 25330 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.156 18.507 167.52 25.849 136.23 45.654 56.948 206.24 157 28 130 46 56 195 3 1 3 1 1 3 13820 7077 680 6807 16582;16583;16584 19179;19180;19181 19179 3 GDASTTEIEWLGFQK Unmodified 1680.7995 0.79951586 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 78.368 78.368 3 3.5118E-16 29975 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.591 76.007 148.03 73.464 125.18 147.27 79.813 126.71 139 74 121 139 83 121 4 2 3 3 2 3 16187 7078 2045 6808 16585;16586;16587;16588 19182;19183;19184;19185;19186 19186 5 GDATVSYEDPPTAK Unmodified 1449.6624 0.66235368 2063 Q5SUT0;Q5SUS9;Q61545 Ewsr1 RNA-binding protein EWS yes no 0 0 0 0 4 0.816 1 1 1 49.254 49.254 3 4.7112E-05 15947 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.759 62.729 24.564 111.3 53.256 76.114 84.727 39.442 23 107 56 74 83 37 1 2 1 2 1 1 15494 7079 2063 6809 16589;16590;16591 19187;19188;19189 19188 3 GDCDLETCR Unmodified 1124.4227 0.42265746 707 S4R2G0;D3Z519;D3Z2W1;D3YWQ0 Dgki Diacylglycerol kinase yes no 0 0 0 0 1.5 0.5 1 1 34.709 34.709 2 0.014515 8843 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.954 51.575 0 58.972 36.616 87.755 99.683 86.699 0 56 37 84 102 84 0 2 1 2 2 2 7898 7080 707 6810 16592;16593 19190;19191 19190 2 GDCYQVLIEDCIPVLK Unmodified 1920.9325 0.93252065 1845 P97355 Sms Spermine synthase yes yes 0 0 0 0 6 0 1 84.75 84.75 3 0.00019216 31576 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.704 45.598 0 20.216 0 0 19.197 19.706 0 19 0 0 19 19 0 1 0 0 1 1 1818.8 7081 1845 6811 16594 19192 19192 1 GDDASEEGQNGSSPK Deamidation (N) 1477.5805 0.58047454 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6V4G5 Add1 Alpha-adducin yes no 0 1 0 0 1 0 2 33.901 33.901 3 2.5914E-16 8595 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.22 111.31 112.77 54.296 116.04 102.48 111.3 124.74 106 60 115 102 115 120 2 2 2 2 2 2 14187 7082 3276 6812 16595;16596 19193;19194 19194 1122 2 GDDETLHK Unmodified 913.41412 0.4141249 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3 0.816 1 1 1 35.124 35.124 3 0.0057016 9790 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.879 39.759 266.43 154.6 175.19 288.55 258.74 272.97 250 158 179 278 269 263 2 1 1 2 2 2 20110 7083 1974 6813 16597;16598;16599 19195;19196;19197 19196 3 GDDGIFDDNFIEER Unmodified 1640.6954 0.69544472 1258 Q78ZM0;O70492;D3Z789;D3Z6Z0 Snx3 Sorting nexin-3 yes no 0 0 0 0 2 0.816 1 1 1 72.998 72.998 2;3 6.4747E-14 24835 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.306 54.305 19.073 37.944 8.2747 19.923 38.211 18.098 18 37 9 19 38 18 2 2 1 1 2 2 12014 7084 1258 6814 16600;16601;16602 19198;19199;19200 19198 3 GDDLEEGVTSEEFDK Unmodified 1668.7003 0.70025533 2058 Q5SRX1;Q5SXA5;Q5SXA4;F6RBX1;F6ZDJ1 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 1.5 0.5 1 1 62.585 62.585 3 0.0015706 22002 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.695 36.819 0 29.492 37.196 48.271 46.945 0 0 28 38 47 47 0 0 1 2 2 2 0 5276.9 7085 2058 6815 16603;16604 19201;19202 19202 2 GDDLLPAGTEDYIHIR Unmodified 1783.8741 0.87407779 1576;2989 P48024;A0A1L1SSA3;J3QPZ8;Q9CXU9 Eif1;Eif1b Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b no no 0 0 0 0 5 0 1 67.746 67.746 3 0.005223 24257 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.788 24.826 0 28.85 56.322 56.995 45.498 0 0 28 56 56 46 0 0 1 1 1 1 0 2993.6 7086 1576;2989 6816 16605 19203 19203 1 GDEALEK Unmodified 760.3603 0.36029842 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 3.5 0.5 1 1 41.5 41.5 2 0.015212 12720 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.5 45.518 176.97 171.51 228.62 227.62 248.95 0 167 176 231 225 248 0 1 1 1 1 1 0 15822 7087 2840 6817 16606;16607 19204;19205 19204 2 GDECELLGHNK Unmodified 1270.5612 0.56119985 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 5 0 1 44.414 44.414 3 0.0009167 13233 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.776 52.804 0 0 0 40.441 0 49.036 0 0 0 37 0 46 0 0 0 1 0 1 2455 7088 2361 6818 16608 19206 19206 1 GDEELDSLIK Unmodified 1117.5503 0.55028404 1338 Q3THW5;P0C0S6;Q8R029;Q3UA95 H2afv;H2afz Histone H2A.V;Histone H2A.Z;Histone H2A yes no 0 0 0 0 6.67 4.5 1 1 1 67.076 67.076 3 8.8828E-06 24517 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.3 60.737 0 67.764 83.501 74.551 146.07 154.67 0 65 84 74 148 149 0 2 2 2 3 3 29332 7089 1338 6819 16609;16610;16611 19207;19208;19209 19207 3 GDEGIFEESFIEER Unmodified 1655.7315 0.73149588 1259 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493 Snx12 Sorting nexin-12 yes no 0 0 0 0 2 0.816 1 1 1 72.72 72.72 2;3 5.278E-06 27144 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.99 76.187 29.987 0 29.776 8.2729 67.367 37.52 28 0 28 9 66 37 1 0 2 1 3 3 17242 7090 1259 6820 16612;16613;16614 19210;19211;19212;19213 19213 4 GDFANANNFDNTYGQVSEDLR Unmodified 2346.0149 0.014881381 826 E9PV24 Fga Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 0 0 0 0 4 0 1 69.406 69.406 3 0.0089109 25102 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.174 19.582 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 2017.3 7091 826 6821 16615 19214 19214 1 GDFCIQVGR Unmodified 1050.4917 0.49166372 866;1385 E9PZF0;Q01768;P15532;Q5NC80 Gm20390;Nme2;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 0 6 0 1 55.314 55.314 3 0.040683 17863 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.19 9.7757 29.657 76.736 0 50.278 0 0 28 74 0 46 0 0 1 1 0 1 0 0 4181.6 7092 866;1385 6822 16616 19215 19215 1 GDFDENLNYPEQK Unmodified 1567.6791 0.67906638 779 D3Z645;Q9QZ88;D3YYD5 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 0 6.67 4.5 1 1 1 58.3 58.3 3 0.00010422 20153 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.588 62.027 0 173.18 127.9 103.01 174.41 144.3 0 167 130 102 176 139 0 3 2 1 2 1 44046 7093 779 6823 16617;16618;16619 19216;19217;19218 19218 3 GDFGTQK Unmodified 751.35007 0.35006808 1188;75 O35343;A0A0B4J1E7;O35344 Kpna4;Kpna3 Importin subunit alpha-3;Importin subunit alpha-4 no no 0 0 0 0 6 0 1 41.35 41.35 2 0.059108 11337 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.127 31.663 108.6 70.04 82.109 66.151 0 127.92 102 74 83 65 0 120 1 1 1 1 0 1 6789.4 7094 75;1188 6824 16620 19219 19219 1 GDFIALDLGGSSFR Unmodified 1453.7201 0.72014333 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 79.608 79.608 2;3 2.4819E-129 28478 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 248.5 206.16 147.82 128.05 177.65 180.34 240.47 229.79 139 131 177 176 241 222 3 3 3 3 3 4 85416 7095 1055 6825 16621;16622;16623;16624;16625 19220;19221;19222;19223;19224 19221 5 GDFIPGLR Unmodified 873.47085 0.47085192 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 8 0 1 62.57 62.57 2 0.0092385 19850 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.75 58.28 108.61 0 140.11 0 210.88 72.866 102 0 130 0 204 74 1 0 1 0 1 1 27482 7096 1520 6826 16626 19225 19225 1 GDFLASLENDIKPAFGTNQEDYASYIMNGIIK Unmodified 3533.7025 0.70245094 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 8 0 1 98.836 98.836 5 0.00046491 35395 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.106 24.301 7.476 6.9439 0 0 0 0 7 7 0 0 0 0 1 1 0 0 0 0 1203.1 7097 1554 6827 16627 19226 19226 1 GDFVTSFYWPWQTK Unmodified 1760.8199 0.81985737 1941 Q8VDQ1;Q3TXN1 Ptgr2 Prostaglandin reductase 2 yes no 0 0 0 0 10 0 1 92.81 92.81 3 3.2531E-05 30234 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.486 65.367 29.904 27.776 0 20.037 38.828 0 28 28 0 19 38 0 1 1 0 1 1 0 5074.4 7098 1941 6828 16628 19227 19227 1 GDGAALQEMTSQINQK Unmodified 1689.7992 0.79919829 1125 H7BWY8;Z4YL87;Q8C8T8 Tsr2 Pre-rRNA-processing protein TSR2 homolog yes no 0 0 0 0 5 0 1 64.24 64.24 3 0.00024726 22614 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.83 39.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7099 1125 6829 16629 19228 19228 1 GDGAPAPSGPPPPGTGR Unmodified 1486.7165 0.71645494 272 A0A1D5RLF1;Q8BGH4 Reep1 Receptor expression-enhancing protein 1 yes no 0 0 0 0 3 0 1 37.708 37.708 3 0.011594 11013 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.915 18.906 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 2608 7100 272 6830 16630 19229 19229 1 GDGEDEATAVMGAR Unmodified 1377.5831 0.5830575 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 2 0.707 1 2 1 47.477 47.477 2;3 3.0601E-24 14147 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.23 110.85 20.183 57.12 123.98 76.544 46.273 88.224 19 56 121 75 46 84 1 2 3 2 1 2 22226 7101 2583 6831 16631;16632;16633;16634 19230;19231;19232;19233 19230 4 GDGPICLVLAPTR Unmodified 1367.7231 0.72312022 2135;1963 Q8BTS0;Q61656;S4R1I6;B1ARB9;Q501J6;Q3U741;Q3TU25 Ddx5;Ddx17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 7 0 1 70.385 70.385 2 0.00036338 24119 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.959 50.447 20.037 0 58.846 36.934 0 29.848 19 0 56 37 0 28 1 0 1 1 0 1 5878.4 7102 2135;1963 6832 16635 19234 19234 1 GDGPVQGTIHFEQK Unmodified 1511.7369 0.73685603 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 6.57 2.77 1 2 2 1 1 50.245 50.245 3;4 7.2941E-42 16265 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 187.08 127.89 1550.1 1385.4 1141.7 1295.6 1956.1 1523 1457 1415 1151 1264 1976 1477 8 9 6 6 9 8 294230 7103 1326 6833 16636;16637;16638;16639;16640;16641;16642 19235;19236;19237;19238;19239;19240;19241;19242;19243;19244 19237 10 GDGPYSLVAVINSAQDAPSEAPTEVGVK Unmodified 2770.3661 0.36611866 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 9.5 3.5 1 1 83.362 83.362 4 2.647E-22 31017 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.131 72.676 69.466 0 63.467 73.338 83.777 81.823 65 0 62 72 86 79 1 0 2 2 2 2 18272 7104 1362 6834 16643;16644 19245;19246 19245 2 GDGQTCYDIDECSEQPSR Unmodified 2115.811 0.81096154 1342 P10493 Nid1 Nidogen-1 yes yes 0 0 0 0 1 0 1 44.682 44.682 3 1.0719E-09 12931 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.56 106.76 9.5136 19.447 7.6184 20.313 0 0 9 19 9 19 0 0 1 1 1 1 0 0 3535.6 7105 1342 6835 16645 19247 19247 1 GDGTISAITEK Unmodified 1090.5506 0.55061839 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 0 5.5 0.5 1 1 54.333 54.333 2;3 0.0013267 18033 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.298 50.107 69.283 0 77.659 46.238 151.06 47.203 65 0 74 46 148 46 2 0 2 1 2 1 4742.8 7106 1497 6836 16646;16647 19248;19249 19248 2 GDGVGSTR Unmodified 747.35113 0.35113072 1063 Q7TSC1;G3UX48 Prrc2a Protein PRRC2A yes no 0 0 0 0 3 0 1 22.174 22.174 2 0.044011 3882 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.073 30.193 0 39.368 0 0 0 29.848 0 37 0 0 0 28 0 1 0 0 0 1 1918 7107 1063 6837 16648 19250 19250 1 GDGVTEIR Unmodified 845.4243 0.42429566 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 0 2 0 1 37.323 37.323 2 0.019482 10590 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.692 24.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7108 1227 6838 16649 19251 19251 1 GDGVVLVAPPLR Unmodified 1191.6976 0.69755739 1721 P62311 Lsm3 U6 snRNA-associated Sm-like protein LSm3 yes yes 0 0 0 0 6 0 1 65.248 65.248 2 0.015073 22450 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.124 37.492 0 38.773 35.61 47.095 56.413 0 0 37 37 46 56 0 0 1 1 1 1 0 2035.8 7109 1721 6839 16650 19252 19252 1 GDHAGVLK Unmodified 795.4239 0.42390173 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 0 6 0.816 1 1 1 35.698 35.698 3 0.010617 9331 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.962 32.813 359.16 186.32 252.41 216.89 46.512 281.42 337 195 252 213 46 264 3 2 2 2 1 2 27883 7110 2131 6840 16651;16652;16653 19253;19254;19255 19253 3 GDHFLYTNGK Deamidation (N) 1151.5247 0.52473799 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 1 0 0 5.5 0.5 1 1 49.794 49.794 3 0.00036117 15191 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.573 64.142 404.84 246.98 278.56 219.84 466.07 297.59 380 250 271 222 465 288 3 2 2 2 3 2 36931 7111 1263 6841 16654;16655 19256;19257;19258 19258 345 3 GDIFVSEPSPDLEAR Unmodified 1630.7839 0.7838658 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 4 0 1 65.927 65.927 3 2.5669E-05 23546 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.11 79.449 29.952 18.196 0 0 39.748 0 28 19 0 0 38 0 1 1 0 0 1 0 3977.9 7112 2323 6842 16656 19259 19259 1 GDILTLLNSTNK Unmodified 1287.7034 0.70343063 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.5 0.5 1 1 79.322 79.322 2;3 0.0011509 24770 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.685 35.174 0 38.575 66.238 39.898 104.86 0 0 37 65 38 102 0 0 1 2 1 2 0 7153 7113 551 6843 16657;16658 19260;19261 19261 2 GDINHER Deamidation (N) 840.37259 0.37259444 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 1 0 0 7 6 1 1 21.684 21.684 3 0.011198 3318 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.36 76.886 632.99 481.98 346.76 558.6 807.26 722.1 594 489 336 534 820 699 4 2 4 2 5 5 271400 7114 1369 6844 16659;16660 19262;19263;19264;19265;19266 19262 439 5 GDINHER Unmodified 839.38858 0.38857886 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 19.341 19.341 3 0.0020099 3032 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.52 76.798 1177.7 851.03 1433.5 1250.4 1118.8 1345.4 1109 897 1429 1237 1166 1291 4 6 6 5 5 5 539790 7115 1369 6844 16661;16662;16663;16664 19267;19268;19269;19270;19271;19272 19268 6 GDINHERGER Deamidation (N) 1182.5378 0.53776229 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 1 0 1 1 0 1 20.672 20.672 4 9.8716E-05 3182 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.93 89.007 123.91 86.643 20.456 139.56 134.72 144.33 116 88 19 130 139 139 2 1 1 1 1 2 24330 7116 1369 6845 16665 19273;19274 19274 439 2 GDIPDLTQAPSSLMETLEQHLNTLEGK Unmodified 2936.4437 0.44371706 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 7 0 1 98.463 98.463 4 0.051105 36116 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 23.566 12.663 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 2652.8 7117 2129 6846 16666 19275 19275 1 GDIPGLGDDGYGTK Unmodified 1363.6256 0.62557424 690 D3YUZ8;A0A338P6J0;Q91XM9 Dlg2 Disks large homolog 2 yes no 0 0 0 0 7.33 4.03 1 1 1 62.012 62.012 2;3 0.00011257 21687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.66 63.639 29.49 56.843 114.15 53.725 36.131 68.259 28 56 111 56 37 65 1 1 2 2 1 2 7585.3 7118 690 6847 16667;16668;16669 19276;19277;19278 19277 3 GDLDFTYVTSR Unmodified 1272.5986 0.59863121 2306 Q80TZ3;B1B0B8;B1B0B7 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 9.5 3.5 1 1 63.92 63.92 2 1.6169E-07 21833 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.93 77.855 69.163 0 97.888 53.64 92.195 76.253 65 0 93 56 93 74 1 0 1 1 1 1 7630.1 7119 2306 6848 16670;16671 19279;19280 19279 2 GDLDISYITSR Unmodified 1238.6143 0.61428128 171 A0A0R4J0F6;Q99KY4 Gak Cyclin-G-associated kinase yes no 0 0 0 0 6 0 1 65.221 65.221 2 0.003546 22484 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.389 39.885 39.312 46.93 25.572 38.399 27.524 0 37 47 28 37 28 0 1 1 1 1 1 0 2418.6 7120 171 6849 16672 19281 19281 1 GDLETLQPGDDVEFTIK Unmodified 1875.9102 0.91018852 2566 Q8JZN2;Q91W50;A0A0G2JF72;A0A0G2JE62;A0A0G2JDJ7 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 4 0 1 76.697 76.697 3 0.017524 28459 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.127 17.294 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2995.9 7121 2566 6850 16673 19282 19282 1 GDLETQTQLEHAR Unmodified 1496.7219 0.72193424 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 6 0 1 48.082 48.082 3 0.04522 14400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.737 15.641 39.238 35.93 47.418 0 56.948 47.411 37 37 46 0 56 46 1 1 1 0 1 1 6224.4 7122 3358 6851 16674 19283 19283 1 GDLGIEIPAEK Unmodified 1140.6027 0.60265396 1609 P52480;E9Q509;G3X925;P53657 Pkm;Pklr Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR yes no 0 0 0 0 6.83 2.91 1 1 2 1 1 66.275 66.275 2;3 1.334E-13 23969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.54 104.72 1836 1890.4 1588 1952.1 1822.2 2271.9 1728 1918 1613 1902 1853 2179 6 8 3 6 5 6 548630 7123 1609 6852 16675;16676;16677;16678;16679;16680 19284;19285;19286;19287;19288;19289;19290;19291 19290 8 GDLPGLVR Acetyl (Protein N-term) 867.48142 0.48141661 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 1 0 0 0 8 5 1 1 63.579 63.579 2 0.0056647 23064 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.74 90.436 9.4447 19.256 19.355 0 38.702 0 9 19 19 0 37 0 1 1 1 0 1 0 29043 7124 2050 6853 16681;16682 19292;19293 19292 2 GDLPLNINIQEPR Acetyl (Protein N-term) 1519.7995 0.79945628 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 1 0 0 0 6.67 4.5 1 1 1 79.438 79.438 2;3 0.00042026 29994 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.359 16.358 39.313 36.138 34.64 73.433 53.823 52.83 37 37 37 70 56 51 1 1 1 2 1 2 12183 7125 2730 6854 16683;16684;16685 19294;19295;19296 19294 3 GDLVGGLDIVK Unmodified 1084.6128 0.61282471 259 A0A1B0GS58;Q9CQM9 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 8.67 3.09 1 1 1 72.29 72.29 2;3 0.00045694 25069 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.763 10.81 167.3 44.69 156.45 27.828 218.99 104.15 157 46 149 28 214 102 3 1 3 1 3 2 16078 7126 259 6855 16686;16687;16688 19297;19298;19299 19298 3 GDLVPSGVVLELLK Unmodified 1437.8443 0.84428121 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 9.33 2.62 1 1 1 93.575 93.575 3 4.4419E-05 37281 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.078 60.053 0 118.7 28.277 110.97 62.793 68.041 0 112 28 104 65 65 0 4 1 3 3 3 14830 7127 2792 6856 16689;16690;16691 19300;19301;19302;19303 19303 4 GDLVSAEIASR Unmodified 1116.5775 0.57750184 1195 O35449 Prrt1 Proline-rich transmembrane protein 1 yes yes 0 0 0 0 5 0 1 54.499 54.499 2 0.002566 18125 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.036 29.591 0 87.11 71.928 65.408 71.761 76.836 0 83 74 65 74 74 0 1 1 1 1 1 6273.5 7128 1195 6857 16692 19304 19304 1 GDMTNSDFYSK Acetyl (Protein N-term);Deamidation (N) 1306.5023 0.50234756 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 1 1 0 0 3 0 1 64.964 64.964 2 0.0056765 23484 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.978 42.404 39.588 0 19.061 29.119 18.536 0 37 0 19 28 19 0 1 0 1 1 1 0 1199.3 7129 1042 6858 16693 19305 19305 273 1 GDNITLLQSVSN Unmodified 1259.6357 0.635745 1719 P62305 Snrpe Small nuclear ribonucleoprotein E yes yes 0 0 0 0 6 0 1 71.454 71.454 2 0.00096314 25491 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.379 48.636 39.41 26.694 26.355 48.059 34.478 58.712 37 28 28 46 37 56 1 1 1 1 1 1 5973.7 7130 1719 6859 16694 19306 19306 1 GDNPFPK Unmodified 773.3708 0.37080353 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 6 0 1 48.924 48.924 2 0.037575 14832 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.229 57.737 158.05 150.01 0 157.96 202.16 237.28 148 151 0 148 208 228 1 1 0 1 1 1 11417 7131 3214 6860 16695 19307 19307 1 GDPDDAAR Unmodified 815.34096 0.34095996 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 13 0 1 23.382 23.382 2 0.010269 3638 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.458 68.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7132 3355 6861 16696 19308 19308 1 GDPDDAARR Unmodified 971.44207 0.44207099 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 1 13 0 1 20.687 20.687 3 0.0094018 3028 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.435 26.39 12.722 13.8 14.256 0 0 14.924 12 14 14 0 0 14 1 1 1 0 0 1 1091.7 7133 3355 6862 16697 19309 19309 1 GDPGLATIAK Unmodified 941.5182 0.51819605 1740 P62812 Gabra1 Gamma-aminobutyric acid receptor subunit alpha-1 yes yes 0 0 0 0 7 0 1 54.775 54.775 2 0.0075621 16743 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.1 38.811 48.923 45.06 34.99 46.998 63.514 67.478 46 46 37 46 65 65 1 1 1 1 1 1 2413.2 7134 1740 6863 16698 19310 19310 1 GDPHELR Unmodified 822.39842 0.39841526 2396 Q8BH59;V9GXX9 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 0 2 0 1 24.867 24.867 3 0.038857 4876 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.166 33.604 60.088 0 0 40.441 0 0 56 0 0 37 0 0 1 0 0 1 0 0 2230.2 7135 2396 6864 16699 19311 19311 1 GDPPQLSNSEER Unmodified 1327.6004 0.60042213 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 6 4.97 1 1 1 37.644 37.644 2 1.0513E-26 10949 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 175.54 134.76 20.159 23.941 70.006 69.905 71.224 86.446 19 23 69 69 74 83 1 1 2 2 2 2 15847 7136 1567 6865 16700;16701;16702 19312;19313;19314 19313 3 GDPQWSELR Unmodified 1086.5094 0.50942227 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 4.5 0.5 1 1 51.509 51.509 2 0.016408 16953 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.404 37.917 117.69 137.94 120.97 0 112.81 95.919 111 139 120 0 111 93 1 1 1 0 1 1 6414 7137 570 6866 16703;16704 19315;19316 19315 2 GDPYPQEVGATVHK Unmodified 1496.726 0.72595699 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 5 0 1 47.438 47.438 3 0.0001239 14713 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.507 61.538 29.758 0 48.002 36.357 65.029 37.586 28 0 46 37 65 37 1 0 1 1 1 1 3244.6 7138 1433 6867 16705 19317 19317 1 GDQALSFLK Acetyl (Protein N-term) 1019.5288 0.52876073 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 1 0 0 0 7.75 3.11 1 1 1 1 80.234 80.234 2 6.4064E-18 29584 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 88.016 1579.3 891.53 1435.4 1230.2 824.34 1320.7 1484 935 1428 1218 880 1261 5 4 4 5 4 5 380660 7139 1585 6868 16706;16707;16708;16709 19318;19319;19320;19321;19322 19319 5 GDQELHGDQTR Unmodified 1254.5589 0.55889166 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 1 0 1 24.243 24.243 3 0.0062986 4266 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.252 38.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7140 1152 6870 16710 19323 19323 1 GDQENVHPDVMLVQPR Unmodified 1832.8839 0.88393097 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 3.5 0.5 1 1 51.454 51.454 3 2.2212E-05 17398 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.41 55.249 88.774 0 47.938 36.711 85.132 0 83 0 46 37 83 0 2 0 1 1 2 0 9184.1 7141 1798 6871 16711;16712 19324;19325 19324 2 GDQFSSHLINLLNPK Unmodified 1681.8788 0.87876924 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 9 0 1 74.182 74.182 3 0.0055737 24582 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.206 25.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7142 1466 6872 16713 19326 19326 1 GDQILSVNGIDLR Deamidation (N) 1399.7307 0.73070802 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 1 0 0 4 0 1 71.089 71.089 2 0.0085716 25790 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.803 56.279 20.387 0 0 20.234 28.359 0 19 0 0 19 28 0 1 0 0 1 1 0 2124.9 7143 690 6873 16714 19327 19327 196 1 GDQLLSVNGVSVEGEHHEK Unmodified 2032.9814 0.98139641 1284;2571;1283 O88952;O88951;Q8JZS0;Q3TUM0 Lin7c;Lin7b;Lin7a Protein lin-7 homolog C;Protein lin-7 homolog B;Protein lin-7 homolog A no no 0 0 0 0 4 0 1 52.566 52.566 4 0.001314 17523 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.12 26.997 39.613 17.545 0 49.593 36.424 0 37 19 0 46 37 0 1 1 0 1 1 0 2061.7 7144 1284;1283;2571 6874 16715 19328 19328 1 GDQVSQNGLPAEQGSPR Deamidation (N) 1739.8075 0.80745479 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 0 2.33 0.471 2 1 42.589 42.589 3 4.3329E-06 13202 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.89 81.942 59.572 59.528 36.244 27.7 39.569 49.318 56 59 37 28 40 47 3 2 1 2 2 2 10234 7145 2148 6875 16716;16717;16718 19329;19330;19331 19330 840 3 GDREQLLQR Acetyl (Protein N-term) 1155.5996 0.59963426 1797 P68510 Ywhah 14-3-3 protein eta yes yes 1 0 0 1 1 0 1 36.368 36.368 2 5.5206E-05 9754 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.76 21.542 0 29.315 28.537 0 19.874 0 0 28 28 0 19 0 0 1 1 0 1 0 537960 7146 1797 6876 16719 19332 19332 1 GDSALFAVNGFNILVDGGSDR Deamidation (N) 2124.0124 0.012362185 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 6 0 2 91.609 91.609 3 3.9399E-08 34125 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.535 57.494 0 5.2348 5.0959 9.837 14.145 34.774 0 5 5 9 14 33 0 1 1 1 1 2 3650.7 7147 510 6877 16720;16721 19333;19334 19333 134 2 GDSALFAVNGFNILVDGGSDR Unmodified 2123.0283 0.028346601 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 13 0 1 90.311 90.311 3 0.058339 35925 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 27.32 8.9559 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 3065.6 7148 510 6877 16722 19335 19335 1 GDSALFAVNGFNMLINGGSER 2 Deamidation (N) 2170.0001 8.29396E-05 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 2 0 0 7 0 1 89.768 89.768 3 0.00099112 33191 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.425 31.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7149 1382 6878 16723 19336 19336 445;446 1 GDSFVGGR Unmodified 793.37187 0.37186616 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 9 4 1 1 37.523 37.523 2 0.013425 10106 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.251 36.712 39.701 0 0 40.441 0 256 37 0 0 37 0 256 1 0 0 1 0 1 41809 7150 2469 6879 16724;16725 19337;19338 19338 2 GDTDQASNILASFGLSAR Unmodified 1821.8857 0.88570511 2602 Q8K310;A0A087WSU2;A0A087WQD6 Matr3 Matrin-3 yes no 0 0 0 0 9.33 2.62 1 1 1 82.972 82.972 2;3 6.8839E-46 30105 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 153.18 134.39 118.11 53.685 140.59 134.42 109.68 85.579 111 56 139 130 111 83 3 2 4 3 3 2 26601 7151 2602 6880 16726;16727;16728 19339;19340;19341;19342 19339 4 GDTELAPSFEQR Unmodified 1348.6259 0.62590859 2024 Q3V3V9;S0DHL8 Rltpr Leucine-rich repeat-containing protein 16C yes no 0 0 0 0 4 0 1 51.925 51.925 2 0.039426 17202 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.998 5.449 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7152 2024 6881 16729 19343 19343 1 GDTNFYGK Unmodified 900.39775 0.39774656 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 47.957 47.957 2;3 0.011446 13648 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.973 38.143 287.48 129.38 189.69 161.39 199.08 350.36 269 130 186 158 195 334 2 2 2 2 1 3 21168 7153 3170 6882 16730;16731;16732 19344;19345;19346 19345 3 GDTPPPETITDTNLETPSDTER Unmodified 2385.082 0.081957893 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 0 1.67 0.471 1 2 56.519 56.519 3 6.332E-16 17826 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.098 79.041 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 6482.9 7154 896 6883 16733;16734;16735 19347;19348;19349 19347 3 GDTVLLK Unmodified 744.43815 0.43815481 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 7 1 1 1 54.304 54.304 2 0.037637 17444 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.18 6.2485 418.88 394.35 497.87 268.09 681.84 315.96 395 405 495 268 674 306 2 2 2 1 2 1 37817 7155 1875 6884 16736;16737 19350;19351 19350 2 GDVAEGDLIEHFSQFGAVEK Unmodified 2147.0171 0.017113212 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 4 0 1 76.583 76.583 3 0.061239 28435 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 25.544 14.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7156 2985 6885 16738 19352 19352 1 GDVEEDEAVPDSEQDIKPR Unmodified 2126.9604 0.96038619 2863 Q99LG2;E9PV58 Tnpo2 Transportin-2 yes no 0 0 0 1 1.6 0.49 2 3 50.404 50.404 3;4 8.2087E-22 16386 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.29 93.882 69.064 94.012 80.56 97.401 62.837 19.757 65 94 84 93 65 19 2 3 3 2 2 1 25939 7157 2863 6886 16739;16740;16741;16742;16743 19353;19354;19355;19356;19357 19356 5 GDVEHTIR Unmodified 925.46174 0.4617438 2853 Q99L27 Gmpr2 GMP reductase 2 yes yes 0 0 0 0 3 0 1 30.269 30.269 3 0.013577 7501 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.245 33.306 0 18.827 19.428 0 9.414 0 0 18 19 0 9 0 0 1 1 0 1 0 1902.8 7158 2853 6887 16744 19358 19358 1 GDVENTILDILGGLR Unmodified 1583.8519 0.85188578 3157 Q9DCZ1 Gmpr GMP reductase 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 104.18 104.18 3 3.7377E-05 37193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.08 48.201 13.885 21.738 28.155 22.368 0 12.792 13 21 28 22 0 12 2 2 2 3 0 1 3527.3 7159 3157 6888 16745;16746;16747 19359;19360;19361 19359 3 GDVESIEAIQR Unmodified 1215.6095 0.60953025 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 51.874 51.874 2 3.8631E-06 17553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.701 65.638 39.296 0 68.073 46.221 0 0 37 0 65 46 0 0 1 0 1 1 0 0 3214 7160 2235 6889 16748;16749 19362;19363 19362 2 GDVESIPIMLVGNK Unmodified 1470.7752 0.77521537 2055 Q5PR73 Diras2 GTP-binding protein Di-Ras2 yes yes 0 0 0 0 7 0 1 80.007 80.007 3 2.8506E-05 28683 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.39 3.9248 0 49.551 27.323 0 48.116 0 0 47 28 0 46 0 0 1 1 0 1 0 3554.9 7161 2055 6890 16750 19364 19364 1 GDVNVVDLK Unmodified 957.51311 0.51311067 2451 Q8BRR9;Q61481;F6X0V1 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 5 0 1 58.924 58.924 2 0.060755 20206 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.683 19.886 39.305 36.116 35.963 38.298 0 39.442 37 37 37 37 0 37 1 1 1 1 0 1 1963.5 7162 2451 6891 16751 19365 19365 1 GDVSEDEPSLGR Unmodified 1259.563 0.56297399 726 D3Z4K1;D3Z478;D3YYS7;Q9D0L8 Rnmt mRNA cap guanine-N7 methyltransferase yes no 0 0 0 0 1 0 2 43.96 43.96 2;3 2.142E-40 12539 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 196.88 160.43 69.064 114.22 17.636 126.93 168.85 0 65 112 19 120 167 0 2 2 1 2 2 0 23526 7163 726 6892 16752;16753 19366;19367 19367 2 GDVTAEEAAGASPAK Unmodified 1372.647 0.64703797 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 0 0 0 3 0 1 45.317 45.317 3 2.8103E-08 14536 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.06 81.656 39.414 56.926 0 39.373 56.767 0 37 56 0 37 56 0 1 1 0 1 1 0 9516.3 7164 1480 6893 16754 19368 19368 1 GDVTIGPR Unmodified 813.43447 0.43446642 780 D3Z6H3;Q9WUB4;F6XWI6 Dctn6 Dynactin subunit 6 yes no 0 0 0 0 5 0 1 40.617 40.617 2 0.021985 11436 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.072 21.567 78.956 0 74.902 107.02 0 108.73 74 0 74 102 0 102 1 0 1 1 0 1 4936.8 7165 780 6894 16755 19369 19369 1 GDVTITNDGATILK Unmodified 1416.746 0.74602373 1824 P80315;G3UYW5 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 5 0 1 63.584 63.584 3 0.00010058 22351 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.467 62.862 59.91 35.328 0 0 0 69.29 56 37 0 0 0 65 1 1 0 0 0 1 5777.9 7166 1824 6895 16756 19370 19370 1 GDVTTQVALQPALK Unmodified 1439.7984 0.79839365 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 8.71 4.23 1 1 1 1 3 62.48 62.48 2;3;4 1.3095E-29 22238 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 161.1 123.63 596.62 584.99 661.1 401.62 402.06 631.97 562 598 655 404 401 601 6 7 5 4 4 6 166580 7167 1336 6896 16757;16758;16759;16760;16761;16762;16763 19371;19372;19373;19374;19375;19376;19377 19375 7 GDVVHVK Unmodified 752.41809 0.41808807 2743 Q91VM9;D3Z636;G8JL76 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 6 0.816 1 1 1 38.509 38.509 3 0.031743 9146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.103 23.025 157.82 99.375 167.32 148.43 178.97 69.29 148 102 167 148 176 65 2 2 3 3 2 1 13256 7168 2743 6897 16764;16765;16766 19378;19379;19380 19380 3 GDVVIVLTGWRPGSGFTNTMR Unmodified 2262.1579 0.15792099 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 11.5 0.5 1 1 79.172 79.172 3 3.3401E-05 21383 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.718 40.828 79.402 14.404 29.432 61.208 33.472 69.29 74 14 28 56 32 65 1 1 1 1 1 1 18848 7169 1609 6898 16767;16768 19381;19382 19382 2 GDVVLVVPSDSEADQDAGWLVGVK Unmodified 2454.2278 0.22783427 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 7.25 3.34 2 1 1 88.443 88.443 3;4 6.0786E-17 33808 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.94 85.843 77.689 47.336 130.78 127.19 94.83 191.31 73 46 126 121 97 182 5 3 5 4 5 7 38741 7170 90 6899 16769;16770;16771;16772 19383;19384;19385;19386;19387;19388;19389;19390 19385 8 GDVVPKDVNAAIATIK Unmodified 1609.9039 0.90392136 1313;1794 P05213;P68369;P05214 Tuba1b;Tuba1a;Tuba3a Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 1 7 0 1 69.73 69.73 3 0.00013879 23905 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.805 51.667 196.78 112.22 194.96 186.51 275.02 209.62 185 121 195 186 278 204 2 2 2 2 2 2 11014 7171 1313;1794 6900 16773 19391;19392 19392 2 GDVVYIYR Unmodified 983.50763 0.50763136 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 6 0 1 54.522 54.522 2 0.036499 17506 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.258 27.605 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7172 353 6901 16774 19393 19393 1 GDVYICLTR Unmodified 1095.5383 0.53827956 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 7 0 1 58.475 58.475 2 0.011985 18541 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.507 34.695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7173 3210 6902 16775 19394 19394 1 GDWSALGK Unmodified 832.40792 0.40791731 1439 P23242;A0A1W2P793;A0A1W2P8A3 Gja1 Gap junction alpha-1 protein yes no 0 0 0 0 7 0 1 58.717 58.717 2 0.044011 18662 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.073 19.703 300.35 172.75 229.47 144.29 201.74 237.29 282 185 229 148 207 228 1 1 1 1 1 1 9386 7174 1439 6903 16776 19395 19395 1 GDYAPILQK Unmodified 1003.5338 0.53384611 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 7 0 1 59.614 59.614 3 0.027753 19083 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.158 22.003 39.189 35.794 55.731 56.479 74.81 0 37 37 56 56 74 0 1 1 1 1 1 0 2485.2 7175 2845 6904 16777 19396 19396 1 GDYDAFFEAR Unmodified 1189.504 0.50400254 3219 Q9JJU8 Sh3bgrl SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 0 0 4.5 0.5 1 1 65.048 65.048 2 0.0092961 23246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.563 48.469 88.357 121.98 47.984 61.208 46.807 38.106 83 121 46 56 46 37 2 3 1 1 1 1 18394 7176 3219 6905 16778;16779 19397;19398;19399 19397 3 GDYDVVINDYEK Unmodified 1428.6409 0.64088996 3063 Q9D4H1 Exoc2 Exocyst complex component 2 yes yes 0 0 0 0 4 0 1 63.7 63.7 3 0.0031056 22603 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.555 21.327 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2995.7 7177 3063 6906 16780 19400 19400 1 GDYPLEAVR Unmodified 1018.5084 0.50835964 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 5.67 3.45 2 1 1 1 1 51.725 51.725 2;3 3.0638E-05 16943 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.04 86.029 2070.1 1485.3 2122.4 1734.9 2030.8 1077.3 1948 1532 2125 1738 2034 1032 7 6 7 7 4 5 822680 7178 1609 6907 16781;16782;16783;16784;16785;16786 19401;19402;19403;19404;19405;19406;19407 19405 7 GDYPQAMK Unmodified 908.4062 0.40620276 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 6 0 1 45.376 45.376 2 0.05506 13219 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.582 30.293 117.93 88.953 122.44 57.308 106.69 49.036 111 93 121 56 102 46 2 2 2 1 1 1 3442.4 7179 2092 6908 16787 19408;19409 19409 2 GDYSVLVPGLR Unmodified 1174.6346 0.63462279 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 8 0 1 68.407 68.407 2 0.017486 22570 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.55 32.412 60.088 0 0 0 77.404 0 56 0 0 0 74 0 1 0 0 0 1 0 4049.4 7180 175 6909 16788 19410 19410 1 GEAAGAVQELAR Unmodified 1170.5993 0.59929991 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 5.83 3.34 1 2 1 1 1 48.41 48.41 2;3 1.2139E-17 15246 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 144.1 91.621 129.23 189.19 0 243.44 674.02 156.58 121 186 0 232 658 158 3 4 0 4 5 3 96950 7181 3268 6910 16789;16790;16791;16792;16793;16794 19411;19412;19413;19414;19415;19416;19417 19415 7 GEAAQLGHK Unmodified 909.46683 0.46682918 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 8 3.56 1 1 1 34.218 34.218 3 0.0010257 7898 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.213 46.737 69.346 0 67.046 65.865 62.976 57.899 65 0 65 65 65 56 1 0 1 1 1 1 3245.7 7182 287 6911 16795;16796;16797 19418;19419;19420 19419 3 GEAASQVQER Unmodified 1073.5102 0.51015055 2787 S4R1P5;Q91ZU6;E9Q9X1;A0A087WSP0;A0A1D5RLZ3 Dst Dystonin yes no 0 0 0 0 2 0 1 27.613 27.613 2 0.04068 6070 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.416 31.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7183 2787 6912 16798 19421 19421 1 GEADRDTYR Unmodified 1081.4789 0.47885043 1785 P63325;A0A338P7K4;Q3UW83 Rps10 40S ribosomal protein S10 yes no 0 0 0 1 1 0 1 22.856 22.856 3 0.0066789 3850 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.376 37.819 31.782 38.755 35.744 40.497 0 39.442 30 39 37 39 0 37 1 1 1 1 0 1 21652 7184 1785 6913 16799 19422 19422 1 GEAGGPPSTR Unmodified 927.44101 0.44100836 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 25.167 25.167 2 1.618E-05 5016 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.311 50.338 69.745 5.32 0 40.441 24.058 88.478 65 5 0 37 23 83 2 1 0 1 2 1 7225.1 7185 2208 6914 16800;16801;16802;16803 19423;19424;19425;19426 19423 4 GEAHLELNAFR Unmodified 1255.6309 0.63093439 356 A0A286YCV0;D3YV00;P98195;Q8C4G3;Q8C288;A2AQC3;O70228 Atp9b;Atp9a Phospholipid-transporting ATPase;Probable phospholipid-transporting ATPase IIB;Probable phospholipid-transporting ATPase IIA yes no 0 0 0 0 5 0 1 51.551 51.551 3 0.047379 16745 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.109 21.322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7186 356 6915 16804 19427 19427 1 GEAIEAILAALEVVSEPFR Unmodified 2013.0783 0.078256906 2697 Q8VDM4;A0A338P6S9;A0A338P7H4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 11.5 1.5 1 1 126.22 126.22 3 1.603E-08 45736 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.511 54.192 2.146 0 0 0 0 2.132 2 0 0 0 0 2 1 0 0 0 0 1 1320.3 7187 2697 6916 16805;16806 19428;19429 19429 2 GEAIETDDTMGGIPAVNGR Deamidation (N) 1902.8629 0.86292076 1044 F8WHW6;O70161;F7C0X9 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 1 0 0 2.5 0.5 1 1 62.639 62.639 3 2.3292E-07 22003 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.666 84.283 9.535 0 20.51 0 19.197 37.706 9 0 19 0 19 37 1 0 1 0 1 2 8516.5 7188 1044 6917 16807;16808 19430;19431 19430 275 2 GEANKPSAADNK Unmodified 1200.5735 0.57347909 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 8 3.56 1 1 1 33.638 33.638 3 0.00010831 8262 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.46 59.255 364.92 346.06 231.08 455.89 424.05 444.15 343 352 241 437 428 428 3 3 2 3 2 3 30475 7189 2295 6918 16809;16810;16811 19432;19433;19434 19432 3 GEASAEGPPLAR Unmodified 1153.5728 0.57275081 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 2.5 0.5 1 1 39.519 39.519 2 1.0769E-07 11780 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.88 81.141 29.87 19 29.321 18.51 27.11 38.668 28 19 28 19 28 37 1 1 1 1 1 1 6671.6 7190 2226 6919 16812;16813 19435;19436 19436 2 GEATAERPGEAAVASSPSK Unmodified 1813.8806 0.88061973 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 1 5.29 3.24 2 2 2 1 38.601 38.601 3;4 1.5671E-35 11479 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 149.16 119.67 297.32 268.7 414.01 235.33 348.94 517.71 279 267 408 236 348 495 5 5 6 4 3 7 94240 7191 1461 6920 16814;16815;16816;16817;16818;16819;16820 19437;19438;19439;19440;19441;19442;19443;19444 19439 8 GEATVSFDDPPSAK Unmodified 1419.6518 0.65178899 1065 G3UXT7;Q8CFQ9;P56959 Fus RNA-binding protein FUS no no 0 0 0 0 7.33 4.03 1 1 1 54.397 54.397 3 6.6027E-05 18462 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.631 81.07 127.84 46.283 163.18 180.1 135.21 165.62 120 46 157 176 139 158 2 1 2 3 2 2 12643 7192 1065 6921 16821;16822;16823 19445;19446;19447 19445 3 GEDGESECVINYVEK Unmodified 1726.7356 0.73559498 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 3 0 2 63.101 63.101 3 0.00026212 22746 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.704 46.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7193 2633 6922 16824;16825 19448;19449 19449 2 GEEATGCAQESQR Unmodified 1421.5841 0.58412013 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 13 0 1 25.804 25.804 2 8.477E-11 4613 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.96 90.409 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 1854.9 7194 1986 6923 16826 19450 19450 1 GEEELEK Unmodified 832.38143 0.38142779 665 CON__Q3SZ57 yes yes 0 0 0 0 2.5 0.5 1 1 44.246 44.246 3 0.0018419 13640 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 124.34 0 199.36 191.67 269.06 237.36 241.79 274.52 188 197 270 236 248 264 1 2 2 2 1 2 58220 + 7195 665 6924 16827;16828 19451;19452 19451 2 GEEGAKAEAEK Unmodified 1117.5251 0.52513192 1471 P28184 Mt3 Metallothionein-3 yes yes 0 0 0 1 4 0 1 36.771 36.771 3 0.0021847 10041 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.412 40.476 0 96.248 161.73 101.85 0 0 0 93 159 102 0 0 0 1 1 1 0 0 5660.7 7196 1471 6925 16829 19453 19453 1 GEEGHDPK Unmodified 867.37226 0.37226009 486 A2AL12;Q8BG05 Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 0 3 0 1 25.463 25.463 3 0.017977 5348 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.676 36.945 0 0 0 20.075 36.791 28.798 0 0 0 19 37 28 0 0 0 1 1 1 1180.2 7197 486 6926 16830 19454 19454 1 GEEGHDPKEPEQLR Unmodified 1619.754 0.75396265 486 A2AL12;Q8BG05 Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 yes no 0 0 0 1 3 0 1 36.292 36.292 4 0.009106 10226 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.189 35.749 49.074 56.275 0 0 56.251 67.685 46 56 0 0 56 65 1 1 0 0 1 1 4500.6 7198 486 6927 16831 19455 19455 1 GEEGYPQEGILEDMPVDPGSEAYEMPSEEGYQDYEPEA Unmodified 4235.7147 0.71472728 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 0 2 0.816 1 1 1 92.217 92.217 4 2.2451E-05 32718 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 36.896 35.784 13.936 0 5.2672 14.988 0 2.132 13 0 5 14 0 2 3 0 2 4 0 1 29635 7199 1232 6928 16832;16833;16834 19456;19457;19458;19459 19457 4 GEEILSGAQR Unmodified 1058.5356 0.53563702 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 13 0 1 43.172 43.172 2 0.015373 12998 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.645 13.928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7200 2803 6929 16835 19460 19460 1 GEENLMDAQVK Unmodified 1232.5707 0.5707019 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 5 0 1 54.401 54.401 3 0.015221 18081 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.062 23.836 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 2537.7 7201 1543 6930 16836 19461 19461 1 GEEQSAIPYFPFIPDQPFR Unmodified 2237.0793 0.079319539 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 0 0 0 0 10.5 2.5 1 1 91.606 91.606 3 4.0595E-05 36365 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.081 38.575 0 29.216 0 20.767 0 0 0 28 0 19 0 0 0 2 0 1 0 0 10527 7202 2709 6931 16837;16838 19462;19463 19463 2 GEERPTQNEK Unmodified 1186.5578 0.55782903 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 1 3 0 1 26.565 26.565 3 0.0020912 5848 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.799 41.686 63.571 67.818 78.44 59.448 77.453 71.344 60 69 79 60 79 69 1 1 1 1 1 1 7752.5 7203 3020 6932 16839 19464 19464 1 GEETPVIVGSALCALEQR Unmodified 1927.9673 0.96732625 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 5 0 1 80.616 80.616 3 0.00010805 30518 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.031 37.542 39.666 6.9013 0 0 0 29.848 37 9 0 0 0 28 1 1 0 0 0 1 4720.2 7204 2361 6933 16840 19465 19465 1 GEFDSSEFEVR Unmodified 1300.5572 0.55716033 990 F7D3B8;F6RSR4;F8WI30;Q9CY18 Snx7 Sorting nexin-7 yes no 0 0 0 0 3 0 1 58.716 58.716 2 0.0011146 20696 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.681 67.217 9.657 0 0 20.056 37.781 0 9 0 0 19 37 0 1 0 0 1 1 0 2118.3 7205 990 6934 16841 19466 19466 1 GEFDVEPGDGGSR Unmodified 1320.5582 0.55822296 638 B8JK56;Q8VHH7 Adcy3 Adenylate cyclase type 3 yes no 0 0 0 0 2 0 1 48.043 48.043 2 0.00066328 15222 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.893 47.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7206 638 6935 16842 19467 19467 1 GEFGVYLVSDGSSR Unmodified 1471.6943 0.69432251 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 6 0 1 66.412 66.412 3 0.0045937 23060 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.823 32.932 50.181 15.281 29.126 0 38.044 19.168 47 18 28 0 37 19 1 1 1 0 1 1 3979.8 7207 2754 6936 16843 19468 19468 1 GEFITTVQQR Unmodified 1177.6091 0.60913632 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 6.67 3.59 1 1 1 1 1 1 50.488 50.488 2 9.7588E-16 14739 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 177.7 133.38 925.61 696.98 850.6 758.36 667.37 842.36 870 718 860 743 678 806 7 6 7 5 4 6 421240 7208 1373 6937 16844;16845;16846;16847;16848;16849 19469;19470;19471;19472;19473;19474;19475;19476;19477 19472 9 GEFKDEEETVTTK Unmodified 1511.6991 0.69913312 2061 Q5SUH7;Q5SUH6;Q99KN9 Clint1 Clathrin interactor 1 yes no 0 0 0 1 4 0 1 51.487 51.487 3 0.00034989 16988 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.075 63.517 79.182 43.605 0 0 0 0 74 46 0 0 0 0 1 1 0 0 0 0 4432.5 7209 2061 6938 16850 19478 19478 1 GEFTIETEGK Unmodified 1109.5241 0.52406928 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 4.5 0.5 1 1 55.797 55.797 2;3 0.011475 19094 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.374 30.823 39.701 0 59.826 36.744 65.106 97.28 37 0 56 38 65 93 1 0 1 2 1 2 7047.6 7210 3002 6939 16851;16852 19479;19480 19479 2 GEFYNEASNLQVAIR Unmodified 1709.8373 0.83729835 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 67.736 67.736 2;3 2.9653E-11 23625 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.08 84.558 20.183 47.698 56.784 18.965 104.2 47.129 19 47 56 19 102 47 1 2 2 1 2 2 14131 7211 680 6940 16853;16854;16855;16856 19481;19482;19483;19484 19482 4 GEGDAAPSEEK Unmodified 1088.4622 0.46219731 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 2 0.816 1 1 1 34.49 34.49 2;3 6.5364E-08 9218 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 117.02 80.321 108.16 138.94 99.219 130.6 315.73 139.71 102 139 102 130 313 139 2 2 1 2 3 2 26052 7212 1318 6941 16857;16858;16859 19485;19486;19487 19486 3 GEGEIEK Unmodified 760.3603 0.36029842 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 3 0 1 38.798 38.798 2 0.05541 11553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.109 16.128 0 0 58.994 35.879 55.628 37.855 0 0 56 37 56 37 0 0 1 1 1 1 2996.2 7213 2424 6942 16860 19488 19488 1 GEGESPPVNGTDEAAGATGDAIEPAPPSQEAEAK Unmodified 3248.4593 0.45930336 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 0 0 0 1 0 1 56.445 56.445 4 2.4321E-07 17890 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.125 45.222 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 2369.5 7214 1480 6943 16861 19489 19489 1 GEGESPPVNGTDEAAGATGDAIEPAPPSQEAEAK Deamidation (N) 3249.4433 0.44331895 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 1 0 0 1.33 0.471 2 1 57.977 57.977 4 8.8378E-10 19782 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.443 51.08 59.793 39.368 49.573 71.045 28.291 29.041 56 37 46 65 28 28 2 1 1 2 1 1 23726 7215 1480 6943 16862;16863;16864 19490;19491;19492 19492 549 3 GEGGILINSQGER Unmodified 1328.6684 0.66844211 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 47.348 47.348 2;3 2.8339E-13 14797 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.56 93.814 48.726 103.91 79.562 144.88 122.61 164.93 46 102 83 139 129 158 1 2 2 3 3 3 31151 7216 2597 6944 16865;16866;16867;16868 19493;19494;19495;19496 19496 4 GEGGTTNPHVFPEGSEPK Unmodified 1838.8435 0.84350594 2293 Q7TQI3;D3YWF6 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 5.6 3.77 2 1 1 1 45.431 45.431 3;4 1.6497E-13 13737 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.68 91.711 306.68 59.742 222.82 149.96 203.81 273.22 287 65 213 148 204 260 4 2 4 4 3 4 54805 7217 2293 6945 16869;16870;16871;16872;16873 19497;19498;19499;19500;19501 19500 5 GEGLYADPYGLLHEGR Unmodified 1745.8373 0.83729835 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 65.466 65.466 3 1.3812E-06 23297 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.36 77.55 108.09 208 105.53 59.033 115.45 253.61 102 204 112 56 120 241 2 3 3 1 2 3 21598 7218 573 6946 16874;16875;16876;16877 19502;19503;19504;19505 19502 4 GEGPASTDR Unmodified 888.39372 0.39372381 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 7 6 1 1 23.032 23.032 2 0.0031023 3749 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.051 33.134 88.418 88.807 59.258 54.553 49.851 77.848 83 90 59 54 51 74 2 3 2 2 2 2 23725 7219 331 6947 16878;16879 19506;19507;19508 19506 3 GEGPAVPGDTPPPTPR Unmodified 1543.7631 0.76307078 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 3 0 1 45.423 45.423 3 8.3842E-06 14503 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.968 52.219 20.244 28.427 0 30.604 0 39.442 19 28 0 28 0 37 1 1 0 1 0 1 4273.8 7220 1669 6948 16880 19509 19509 1 GEGQLSAAER Unmodified 1016.4887 0.48868683 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 4.8 4.17 2 1 1 1 33.156 33.156 2;3 2.2589E-06 7959 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.76 92.727 408.81 468.28 491.4 377.87 574.55 861.21 385 468 492 376 587 825 3 4 4 3 5 7 127560 7221 1652 6949 16881;16882;16883;16884;16885 19510;19511;19512;19513;19514;19515;19516 19516 7 GEGTLDLAWLK Unmodified 1201.6343 0.63428844 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 7 0 1 79.17 79.17 3 0.018396 28241 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.971 23.117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7222 2317 6950 16886 19517 19517 1 GEHGFIGCR Unmodified 1031.4607 0.46069794 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 0 9.5 3.5 1 1 33.398 33.398 3 0.0014146 7905 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.92 62.393 0 48.352 35.426 38.33 0 0 0 46 37 37 0 0 0 1 1 1 0 0 8483.2 7223 2131 6951 16887;16888 19518;19519 19519 2 GEHSIVYLKPSYAFGSVGK Unmodified 2038.0524 0.052376507 1491 P30416;F7CAT1;F6S2D5 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1 11 0 1 62.48 62.48 4 0.0010795 16713 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.68 32.751 88.74 63.176 0 0 135.98 0 83 65 0 0 130 0 1 1 0 0 1 0 6876.8 7224 1491 6952 16889 19520 19520 1 GEIAEAYAELIK Unmodified 1305.6816 0.68163256 57 A0A0A6YW28;P35123;A0A0A6YVY7 Usp4 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 4 yes no 0 0 0 0 6 0 1 78.461 78.461 3 0.0035556 28729 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.225 24.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7225 57 6953 16890 19521 19521 1 GEIAGPPDTPYEGGR Unmodified 1514.7001 0.70013617 1687 P61087;A0A0J9YUI1;D3Z4U3 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 3 0.816 1 1 1 49.479 49.479 2;3 1.5213E-10 16433 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.03 65.103 30.044 59.097 29.112 61.208 0 29.848 28 56 28 56 0 28 1 2 1 2 0 1 13047 7226 1687 6954 16891;16892;16893 19522;19523;19524 19523 3 GEIDAHEDSFK Unmodified 1246.5466 0.54659564 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.25 0.829 1 1 2 45.878 45.878 3;4 8.1737E-14 14184 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.23 123.19 415.39 202.55 345.83 337.42 389.13 434.48 390 205 345 330 394 418 5 4 4 3 4 5 98925 7227 551 6955 16894;16895;16896;16897 19525;19526;19527;19528;19529 19528 5 GEILQIVNR Unmodified 1040.5978 0.59784335 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 0 0 0 8 0 1 60.967 60.967 2 0.0024898 19054 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.287 57.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7228 3241 6957 16898 19530 19530 1 GEITPELLGVMR Unmodified 1313.7013 0.70132214 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 6 0 1 73.581 73.581 2 0.0033603 26455 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.415 33.606 59.91 35.328 0 40.441 0 39.442 56 37 0 37 0 37 1 1 0 1 0 1 4665.1 7229 1255 6958 16899 19531 19531 1 GEKPNPLR Unmodified 909.50321 0.50321468 313 A0A1L1SVK0;Q61206 Pafah1b2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 0 0 1 10 3 1 1 36.469 36.469 3 0.016473 8385 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.301 30.532 514.72 359.45 289.93 587.11 525.16 448.72 483 375 299 562 535 435 2 2 1 2 1 1 49425 7230 313 6959 16900;16901 19532;19533 19532 2 GELASYDMQLR Unmodified 1281.6023 0.60233638 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 58.705 58.705 2 0.0015316 20116 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.963 44.534 29.856 76.723 0 131.21 55.36 69.29 28 74 0 121 56 65 1 2 0 2 1 1 12067 7231 2734 6960 16902;16903 19534;19535 19534 2 GELLEAIK Unmodified 871.50148 0.50148335 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 65.918 65.918 2;3 0.0018294 22032 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.06 44.109 395.42 554.35 568.45 565.3 627.49 347.22 374 555 575 559 633 339 3 4 3 4 3 2 73999 7232 1336 6961 16904;16905;16906;16907 19536;19537;19538;19539 19537 4 GELLEAIKR Unmodified 1027.6026 0.60259438 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 1 9.8 1.72 1 2 1 1 57.515 57.515 2;3 0.0028919 17498 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.749 45.558 521.07 645.49 783.85 441.19 623.63 407.37 492 652 777 445 626 392 4 6 5 4 5 3 208750 7233 1336 6962 16908;16909;16910;16911;16912 19540;19541;19542;19543;19544;19545 19540 6 GELQEEGAVGGAPEETGQR Unmodified 1912.8763 0.87626263 2722 Q8VI59 Pcnxl3 Pecanex-like protein 3 yes yes 0 0 0 0 1 0 1 45.083 45.083 3 0.00022572 13115 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.834 41.422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7234 2722 6963 16913 19546 19546 1 GELSGDFEK Unmodified 980.44509 0.44509068 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 53.668 53.668 2 0.0016461 18029 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.653 34.817 59.184 201.06 81.582 208.27 0 148.17 56 194 83 195 0 139 1 2 1 2 0 1 8081.4 7235 1050;1380 6964 16914 19547;19548 19547 2 GELVPLDTVLDMLR Unmodified 1569.8436 0.84362928 3306 Q9R0Y5;Z4YN97;A0A0A6YXW8 Ak1 Adenylate kinase isoenzyme 1 yes no 0 0 0 0 8.5 2.22 1 1 2 1 1 102.12 102.12 2;3 6.9269E-05 36889 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.264 56.046 68.4 22.608 53.32 49.489 68.922 67.956 64 23 52 47 70 65 3 2 3 2 3 2 23730 7236 3306 6965 16915;16916;16917;16918;16919;16920 19549;19550;19551;19552;19553;19554 19550 6 GELVTQYK Unmodified 936.49165 0.49164694 2498 Q91WG7;Q8C413 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 0 7 0 1 51.608 51.608 3 0.013544 15275 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.436 39.136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7237 2498 6966 16921 19555 19555 1 GEMDTFPTFK Unmodified 1171.522 0.52196079 1852 P97450 Atp5j ATP synthase-coupling factor 6, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 67.846 67.846 3 0.00068485 23773 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.338 56.546 255.26 90.748 475.4 277.14 415.89 250.63 240 93 457 278 418 242 3 2 4 3 4 3 79683 7238 1852 6967 16922;16923;16924;16925 19556;19557;19558;19559 19556 4 GEMEADIR Unmodified 919.40693 0.40693104 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 2 0 1 40.541 40.541 2 0.031608 12093 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.981 24.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7239 3341 6968 16926 19560 19560 1 GEMMDLQHGSLFLK Unmodified 1604.7691 0.76908413 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;A0A1B0GRW9;A0A1B0GS79 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 7 0 1 70.528 70.528 3 0.0016287 24196 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.7 25.011 65.922 46.653 62.058 42.524 41.271 51.056 62 49 62 43 43 49 1 1 1 1 1 1 11487 7240 1315 6969 16927 19561 19561 1 GEMMDLQHGSLFLQTPK Unmodified 1930.9281 0.92810397 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 8 0 1 70.64 70.64 3 0.000446 23629 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.437 34.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7241 1389 6970 16928 19562 19562 1 GENCIAAGR Unmodified 946.42906 0.42906346 2633 Q8R0Y6;D3Z6B9;Q8K009 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 7.33 4.03 1 1 1 30.601 30.601 2 0.012665 7176 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.042 37.11 0 48.944 0 90.951 45.769 28.542 0 46 0 84 46 28 0 1 0 2 1 1 6928.5 7242 2633 6971 16929;16930;16931 19563;19564;19565 19563 3 GENFTETDVK Unmodified 1138.5142 0.51423288 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 3.5 0.5 1 1 48.986 48.986 2;3 0.0011309 16222 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.974 46.853 69.745 0 0 29.558 55.589 47.45 65 0 0 28 56 46 1 0 0 1 1 1 5666 7243 1307 6972 16932;16933 19566;19567 19566 2 GENLEAVVCEEPQVTYSK Unmodified 2050.9517 0.95173576 501 I7HJQ8;A2AP74;Q8BIF0 Cd99l2 CD99 antigen-like protein 2 yes no 0 0 0 0 3 0 1 66.857 66.857 3 0.0022248 24387 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.461 37.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7244 501 6973 16934 19568 19568 1 GENLVSMTVEGPPPK Unmodified 1553.7759 0.77594365 1463 P63163;P27048 Snrpn;Snrpb Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated protein B yes no 0 0 0 0 6 0 1 64.695 64.695 3 0.0012586 22227 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.193 30.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7245 1463 6974 16935 19569 19569 1 GENQGQTFTCGSALSPITDFK Unmodified 2257.0321 0.03211135 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 7.5 3.2 1 2 1 72.553 72.553 3;4 3.3072E-15 26571 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.635 62.196 99.06 74.71 59.225 97.275 44.905 176.74 93 74 56 93 46 167 2 1 1 2 1 2 11536 7246 2322 6975 16936;16937;16938;16939 19570;19571;19572;19573 19570 4 GEPASGKR Unmodified 800.41407 0.41406533 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 1 9.5 3.5 1 1 23.95 23.95 3 0.023724 3806 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.038 7.9346 129.25 0 97.887 46.859 146.69 173.84 121 0 93 46 148 167 2 0 2 1 2 2 18160 7247 1554 6976 16940;16941 19574;19575 19574 2 GEPGTVGR Unmodified 771.38752 0.38751622 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 3.5 0.5 1 1 26.938 26.938 2 0.00046591 6048 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152.47 73.325 48.328 73.626 110.77 104.88 0 188.99 46 74 111 102 0 181 1 1 1 1 0 2 20555 7248 1999 6977 16942;16943 19576;19577 19576 2 GEPPLPEEDLSK Unmodified 1309.6402 0.64016167 2756 Q91WK2 Eif3h Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 0 3 0.816 1 1 1 58.408 58.408 3 6.7256E-05 20442 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.772 31.996 99.297 64.014 28.517 70.555 122.03 37.769 93 65 28 65 121 38 3 2 1 1 3 2 7052.4 7249 2756 6978 16944;16945;16946 19578;19579;19580;19581 19579 4 GEPVPAWEGK Unmodified 1068.524 0.52400971 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5 0 1 55.488 55.488 3 0.0053458 18574 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.785 38.023 0 68.56 35.921 0 28.291 29.041 0 65 37 0 28 28 0 1 1 0 1 1 2855.5 7250 510 6979 16947 19582 19582 1 GEQDLISNGQQVLVCNQEGSSR Deamidation (N) 2418.1081 0.10812984 1142 J3QMM7;K3W4M4;Q9CZ42 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 1 0 0 3 0 1 59.237 59.237 3 3.1204E-11 20952 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.805 58.933 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 3363.3 7251 1142 6980 16948 19583 19583 302 1 GEQPIFSTR Acetyl (Protein N-term) 1075.5298 0.52982336 3402 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 1 0 0 0 2 0 1 54.833 54.833 2 0.012138 18295 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.665 47.838 29.801 27.491 17.465 29.037 27.954 0 28 28 19 28 28 0 1 1 1 1 1 0 9887.1 7252 3402 6981 16949 19584 19584 1 GEQPIFTTR Acetyl (Protein N-term) 1089.5455 0.54547343 3262 Q9QWW1 Homer2 Homer protein homolog 2 yes yes 1 0 0 0 2 0 1 55.214 55.214 2 0.0013844 18483 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.302 74.02 0 0 39.213 18.43 0 29.848 0 0 37 19 0 28 0 0 1 1 0 1 3925.4 7253 3262 6982 16950 19585 19585 1 GESEDDFWWCIDR Unmodified 1713.6729 0.67293514 2298;1040 Q80SW1;D3Z2Q0;F7ATQ6;A0A0N4SUY4;F8WGT1;Q68FL4;F8WI65;H3BKT5;H3BL31;D3YYM7 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 7.6 4.45 1 1 1 2 77.84 77.84 2;3 1.4789E-14 29708 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.94 97.047 29.877 106.2 120.84 113.27 188.01 39.208 28 102 121 112 186 38 2 3 3 3 4 2 22461 7254 2298;1040 6983 16951;16952;16953;16954;16955 19586;19587;19588;19589;19590;19591 19591 6 GESGFFPINYVEVIVPLPP Unmodified 2073.0823 0.082279651 169 J3QQ44;A0A0R4J0B8;Q62421 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 10 3 1 1 116.21 116.21 3 0.00026257 38128 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.831 39.572 2.1354 0.90301 1.0171 0 0 6 2 1 1 0 0 6 1 1 1 0 0 1 1791.8 7255 169 6984 16956;16957 19592;19593 19592 2 GESIPIR Unmodified 770.42865 0.42865276 2485;1539 P40336;Q8C0E2 Vps26a;Vps26b Vacuolar protein sorting-associated protein 26A;Vacuolar protein sorting-associated protein 26B no no 0 0 0 0 4 0 1 42.11 42.11 2 0.031273 12509 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.265 22.606 48.898 35.278 47.409 0 65.675 67.416 46 37 46 0 65 65 1 1 1 0 1 1 3530 7256 1539;2485 6985 16958 19594 19594 1 GESPVDYDGGR Unmodified 1150.4891 0.48908076 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 4.75 4.82 1 1 1 1 39.842 39.842 2 2.0355E-42 11867 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 200.09 126.88 181.83 96.977 250.92 249.1 198.31 116.1 171 102 246 245 199 111 3 3 3 4 3 3 42236 7257 1933 6986 16959;16960;16961;16962 19595;19596;19597;19598 19596 4 GESSQGMQR Unmodified 978.41889 0.41889271 1222 Q80VX2;O54901 Cd200 OX-2 membrane glycoprotein yes no 0 0 0 0 2.5 0.5 1 1 22.12 22.12 2 0.0017672 3833 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.233 69.146 29.815 21.66 47.95 32.639 35.7 43.753 28 23 47 32 37 42 1 2 2 1 1 1 3547.1 7258 1222 6987 16963;16964 19599;19600 19600 2 GESVCLDR Unmodified 934.41783 0.41783007 1707 P62073 Timm10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 0 3 0 1 38.296 38.296 2 0.01987 11233 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.324 1.2518 88.131 91.7 78.317 124.42 110.39 0 83 93 83 120 111 0 1 1 1 1 1 0 29925 7259 1707 6988 16965 19601 19601 1 GESVMVVPTLSEEEAK Unmodified 1703.8288 0.82876708 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 5 0 1 68.123 68.123 3 0.0012888 24448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.787 22.49 49.076 0 47.432 46.966 25.801 38.706 46 0 46 46 28 37 1 0 1 1 1 1 2810.6 7260 2194 6989 16966 19602 19602 1 GETAVPGAPETLR Unmodified 1296.6674 0.66737948 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 7.33 4.03 1 1 1 48.359 48.359 2 1.4898E-11 15584 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.46 92.101 109.45 0 0 67.604 86.818 0 102 0 0 65 83 0 2 0 0 2 1 0 17377 7261 2547 6990 16967;16968;16969 19603;19604;19605 19603 3 GETDEEYLWCIEQTLHFK Unmodified 2297.031 0.031048717 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 6 0 1 85.855 85.855 4 0.0047965 32121 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.202 24.322 20.244 28.427 0 0 19.874 0 19 28 0 0 19 0 1 1 0 0 1 0 1453.2 7262 1594 6991 16970 19606 19606 1 GETPVNSTMSIGQAR Deamidation (N) 1547.725 0.72497071 1778 P63216 Gng3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 yes yes 0 1 0 0 4 0 1 51.148 51.148 3 0.00011635 16853 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.08 54.681 0 29.792 0 50.278 0 0 0 28 0 46 0 0 0 1 0 1 0 0 4596.5 7263 1778 6992 16971 19607 19607 707 1 GEVASDAK Unmodified 775.3712 0.37119746 1387 P16045;A0A2R8VHJ0 Lgals1 Galectin-1 yes no 0 0 0 0 4 0 1 34.41 34.41 2 0.017927 8827 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.474 34.782 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 3688.7 7264 1387 6993 16972 19608 19608 1 GEVITTYCPANNEPIAR Unmodified 1903.9098 0.90981137 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 4.5 0.5 1 1 55.973 55.973 3 1.9194E-06 18803 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.428 61.589 48.689 74.204 74.723 74.919 138.35 104.78 46 74 74 75 139 102 1 2 1 2 2 2 14713 7265 3122 6994 16973;16974 19609;19610 19610 2 GEVLISR Unmodified 772.4443 0.44430282 1836 Q3TWV4;P84091;A0A338P798 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 5 0 1 43.534 43.534 2 0.027665 12821 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.033 30.946 0 168.11 0 142.09 0 168.43 0 158 0 130 0 158 0 1 0 1 0 1 14590 7266 1836 6995 16975 19611 19611 1 GEVNAADAFDIGSFDEEDTK Unmodified 2128.9073 0.90728799 2871 Q99MK8;Q7TS64;Q8BVT9;Q3UYH7;F7AEX1 Adrbk1;Adrbk2 Beta-adrenergic receptor kinase 1;Beta-adrenergic receptor kinase 2 yes no 0 0 0 0 3.5 0.5 1 1 76.183 76.183 3 1.4603E-06 28808 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.222 53.001 0 20.216 8.4281 29.405 66.346 8.5365 0 19 9 28 65 9 0 1 1 1 2 1 5615.8 7267 2871 6996 16976;16977 19612;19613 19612 2 GEVPCTVTTASPLDDAVLSELK Unmodified 2301.141 0.1409931 3110 Q9DB20;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 7.12 3.52 2 2 1 1 2 82.88 82.88 3;4 8.0668E-19 31551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.1 98.503 227.26 268.9 273.5 226.73 319.58 497.23 213 260 270 223 325 475 5 4 7 6 4 8 150260 7268 3110 6997 16978;16979;16980;16981;16982;16983;16984;16985 19614;19615;19616;19617;19618;19619;19620;19621;19622 19618 9 GEYKDNALLAQLIQDK Unmodified 1817.9523 0.95232811 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 7.5 0.5 1 1 76.331 76.331 3;4 0.00019207 26908 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.605 40.876 97.771 104.32 120.93 212.52 230.61 67.004 92 102 121 205 232 65 2 2 2 3 3 1 12848 7269 1160 6998 16986;16987 19623;19624;19625 19623 3 GEYNVYSTFQSHEPEFDYLK Unmodified 2452.0859 0.085921059 2211 Q6P1F6;Q9CWU3;Q6ZWR4;Q925E7;G3UXS9 Ppp2r2a;Ppp2r2b;Ppp2r2d Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 0 0 6 0 1 73.116 73.116 3 0.0027278 26310 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.798 27.782 0 0 29.016 28.742 7.0756 29.646 0 0 28 28 9 28 0 0 1 1 1 1 2398.9 7270 2211 6999 16988 19626 19626 1 GFAFDCDDVNFTTDNLCFVGLMSMIDPPR Unmodified 3353.4501 0.45014112 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 13 0 1 110.55 110.55 4 1.4456E-39 44338 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.11 109.61 5.3265 0 6.4651 0 4.184 0 5 0 6 0 4 0 1 0 1 0 1 0 1381.8 7271 106 7000 16989 19627 19627 1 GFAFVQYVNER Unmodified 1328.6513 0.65133548 3389 Q9Z204;A0A2I3BRM6;A0A2I3BQH3 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 10 1.87 1 1 1 1 68.966 68.966 2;3 1.4249E-07 25335 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.39 60.347 197.78 83.523 204.67 349.71 167.42 360.86 185 83 205 334 177 343 3 2 4 5 3 5 36700 7272 3389 7001 16990;16991;16992;16993 19628;19629;19630;19631;19632 19632 5 GFAFVTFDDHDSVDK Unmodified 1698.7526 0.75256567 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 6 0 1 70.43 70.43 3 1.9055E-06 24931 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.52 81.076 108.48 139.86 43.346 127.79 41.646 107.54 102 139 46 120 46 102 2 2 1 2 1 2 11614 7273 1586 7002 16994 19633;19634 19634 2 GFAFVTFDDHDTVDK Unmodified 1712.7682 0.76821573 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 6 0 1 71.013 71.013 3 3.3107E-08 25180 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.88 76.482 60.088 0 0 0 75.794 46.873 56 0 0 0 74 46 1 0 0 0 1 1 32174 7274 626;486 7003 16995 19635 19635 1 GFAFVTFESPADAK Unmodified 1485.714 0.71399532 385;3339 A0A2I3BRL8;Q91VM5;Q9WV02;A2AFI3;A2AFI4 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 8 0.816 1 1 1 78.307 78.307 3 5.6121E-17 26490 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.6 94.627 88.219 44.412 211.12 145.91 231.98 85.6 83 46 204 149 231 83 2 1 3 3 3 1 19744 7275 385;3339 7004 16996;16997;16998 19636;19637;19638;19639 19639 4 GFAFVYFER Unmodified 1134.5498 0.54983053 131 A0A0N4SVC2;E9QP00;Q6PFR5 Tra2a Transformer-2 protein homolog alpha yes no 0 0 0 0 9 0 1 76.577 76.577 2 0.060771 25759 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.679 34.423 0 78.736 0 0 92.976 125.27 0 74 0 0 93 120 0 1 0 0 1 1 2436.2 7276 131 7005 16999 19640 19640 1 GFAYVQFEDVR Unmodified 1329.6354 0.63535107 1919 Q3TFP0;Q9R0U0;A3KG57 Srsf10;Srsf12 Serine/arginine-rich splicing factor 10 yes no 0 0 0 0 7 0 1 68.441 68.441 2 0.011025 23217 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.916 39.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7277 1919 7006 17000 19641 19641 1 GFCFITYTDEEPVKK Unmodified 1832.8655 0.86548694 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 1 7 0 1 69.082 69.082 4 0.00065622 23488 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.898 44.263 49.014 0 57.772 57.765 0 0 46 0 56 56 0 0 1 0 1 1 0 0 2600.2 7278 668;3370 7007 17001 19642 19642 1 GFCHLCDGQEACCVGLEAGINPTDHLITAYR Unmodified 3533.5585 0.55846279 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 69.375 69.375 4 5.4745E-27 25264 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.304 73.624 0 19.922 38.132 40.147 47.318 0 0 19 38 38 47 0 0 1 2 1 2 0 15516 7279 1520 7008 17002;17003 19643;19644 19643 2 GFCLIPQQSINEAIR Unmodified 1744.893 0.89303909 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 8.5 0.5 1 1 73.87 73.87 3 4.933E-05 25075 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.173 55.368 118.95 54.191 160.23 130.1 130 0 112 56 157 130 130 0 2 1 2 2 2 0 12496 7280 2286 7009 17004;17005 19645;19646 19645 2 GFCLPPHCSR Unmodified 1229.5434 0.54338171 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 8.75 1.48 1 1 1 1 42.65 42.65 3 0.00049533 9951 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.533 70.657 1384.8 1076.1 1228.2 1011.8 1469.9 1608.1 1299 1095 1200 987 1477 1542 10 11 10 9 11 12 42427 7281 1883 7010 17006;17007;17008;17009 19647;19648;19649;19650;19651;19652;19653;19654;19655;19656;19657;19658;19659;19660;19661;19662 19656 16 GFCQVVISSNLR Unmodified 1378.7027 0.70271913 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 8.5 0.5 1 1 62.185 62.185 2 0.0010622 18940 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.848 16.555 118.79 17.583 37.58 87.666 101.33 38.95 111 19 37 84 102 37 2 1 1 2 2 1 14242 7282 2727 7011 17010;17011 19663;19664 19664 2 GFCYVEFDEVDSLK Unmodified 1706.7498 0.74978848 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 5.5 0.5 1 1 80.353 80.353 2;3 2.5658E-16 29575 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.67 92.035 39.2 56.331 36.457 0 0 39.442 37 56 37 0 0 37 1 1 1 0 0 1 7069.6 7283 3333 7012 17012;17013 19665;19666 19666 2 GFDFTLMVAGESGLGK Unmodified 1627.7916 0.79159371 410;3398;1477 A0A338P6R8;A0A338P769;P28661;Q5ND13;Q5ND09;Q5ND18;Q9Z2Q6;B7ZNM7;A0A338P729 Sept4;Sept5 Septin-4;Septin-5 no no 0 0 0 0 13 0 1 88.169 88.169 3 0.00072134 34798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.522 24.553 0 0 0 30.104 26.577 38.684 0 0 0 28 28 37 0 0 0 1 1 1 1956.2 7284 410;1477;3398 7013 17014 19667 19667 1 GFDPSSPVLHELTFQAMSYDLLPIENDVYK Unmodified 3424.6537 0.65370983 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 7 0.816 1 1 1 99.695 99.695 4 2.9713E-26 36413 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.216 71.475 34.162 17.256 14.573 0 28.615 29.181 32 18 14 0 28 28 3 2 1 0 2 2 10438 7285 1160 7014 17015;17016;17017 19668;19669;19670 19669 3 GFDQTINLILDESHER Unmodified 1885.917 0.91700524 2267 Q6ZWM4;A0A0N4SUZ3 Lsm8 U6 snRNA-associated Sm-like protein LSm8 yes no 0 0 0 0 5 0 1 78.338 78.338 3 0.00018331 29309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.949 45.299 0 0 29.017 28.722 8.0946 0 0 0 28 28 9 0 0 0 1 1 1 0 3075.6 7286 2267 7015 17018 19671 19671 1 GFDTTAINK Unmodified 965.48181 0.48181054 3191;192 A0A0R4J0X8;A0A1B0GRS3;Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 no no 0 0 0 0 7 0 1 53.79 53.79 2 0.0011195 16283 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.948 30.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7287 192;3191 7016 17019 19672 19672 1 GFDVASVMSVTLSCDHR Unmodified 1879.8557 0.85566731 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10 2 1 1 75.537 75.537 3 0.001745 26009 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.677 30.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7288 2433 7017 17020;17021 19673;19674 19673 2 GFDVFNALDLMENK Deamidation (N) 1612.7443 0.74430917 1249;476 F7APP3;A2AJH3;O70311;O70310 Nmt2;Nmt1 Glycylpeptide N-tetradecanoyltransferase;Glycylpeptide N-tetradecanoyltransferase 2;Glycylpeptide N-tetradecanoyltransferase 1 no no 0 1 0 0 13 0 1 95.848 95.848 3 0.0028619 38444 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.546 32.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7289 476;1249 7018 17022 19675 19675 118 1 GFEANAPAFDR Unmodified 1193.5465 0.54653606 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 5 0 1 53.917 53.917 2 6.4366E-08 17816 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.45 77.348 108.14 98.957 136.34 0 162.02 94.515 102 102 132 0 158 93 1 1 1 0 1 1 14409 7290 927 7019 17023 19676 19676 1 GFEEIIK Unmodified 834.44872 0.4487195 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 6 0 1 63.248 63.248 2 0.020993 21619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.95 38.19 157.1 104.21 197.7 140.14 0 148.17 148 111 195 139 0 139 1 1 1 1 0 1 8398.6 7291 3012 7020 17024 19677 19677 1 GFESPSDNSSAVLLQWHEK Unmodified 2130.0018 0.0017974991 2901 Q9CPW4 Arpc5 Actin-related protein 2/3 complex subunit 5 yes yes 0 0 0 0 8 2.92 2 1 1 67.217 67.217 3;4 6.8882E-27 23487 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.69 118.86 167.44 33.45 223.78 122.31 116.93 332.45 157 37 213 121 120 315 3 1 3 3 2 4 41922 7292 2901 7021 17025;17026;17027;17028 19678;19679;19680;19681 19679 4 GFEVVYMTEPIDEYCVQQLK Unmodified 2447.1389 0.13888461 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 6 0.707 1 2 1 86.167 86.167 3;4 3.7925E-09 32947 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.501 69.217 109.84 65.985 66.973 38.468 93.648 67.416 103 65 65 37 93 65 4 3 2 2 4 2 27243 7293 1354 7022 17029;17030;17031;17032 19682;19683;19684;19685;19686 19682 5 GFFCDAALDVDGETLR Unmodified 1784.8039 0.80394931 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 5 0 1 78.056 78.056 2 0.00017687 29229 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.813 72.805 20.387 0 0 9.837 18.867 38.904 19 0 0 9 19 37 1 0 0 1 1 2 1970.7 7294 2077 7023 17033 19687;19688 19688 2 GFFDPNTHENLTYLQLLER Unmodified 2306.1331 0.13314602 3266 Q9QXS1;E9Q3W4;A0A2I3BRT4;Q8R0W0 Plec;Eppk1 Plectin;Epiplakin yes no 0 0 0 0 8.67 3.09 1 1 1 81.309 81.309 3 1.2887E-21 31318 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.487 31.967 20.064 18.214 38.84 0 65.384 38.375 19 19 37 0 65 37 1 1 1 0 2 1 11805 7295 3266 7024 17034;17035;17036 19689;19690;19691 19691 3 GFFELFPSVSR Unmodified 1284.6503 0.65027285 1937 Q3TVK3;Q9Z2W0 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 11.5 1.5 1 1 85.466 85.466 2 1.1955E-07 27379 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.13 82.054 0 39.368 29.449 19.012 0 49.036 0 37 28 19 0 46 0 1 1 1 0 1 11053 7296 1937 7025 17037;17038 19692;19693 19692 2 GFFGGLETK Unmodified 954.48108 0.48108226 2630 Q8R0A7;Q3TA40;Q8BQB5 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 10 2.16 1 1 1 67.069 67.069 2;3 0.0006505 21349 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.07 72.876 400.85 126.28 328.89 0 234.27 153.21 376 130 305 0 229 150 2 1 1 0 1 1 32571 7297 2630 7026 17039;17040;17041 19694;19695;19696 19695 3 GFFIKPTVFGDVQDGMR Unmodified 1912.9506 0.95055397 3009 Q9CZS1 Aldh1b1 Aldehyde dehydrogenase X, mitochondrial yes yes 0 0 0 1 11 0 1 77.38 77.38 3 0.00079576 23423 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.565 42.62 59.555 0 89.506 0 0 0 56 0 83 0 0 0 1 0 1 0 0 0 11438 7298 3009 7027 17042 19697 19697 1 GFFLNHYFSK Unmodified 1258.6135 0.61349341 2376 Q8BGC4 Zadh2 Zinc-binding alcohol dehydrogenase domain-containing protein 2 yes yes 0 0 0 0 12 0 1 68.136 68.136 3 0.0021206 17090 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.347 47.615 78.87 0 89.408 0 63.989 116.5 74 0 83 0 65 111 1 0 1 0 1 1 6565.1 7299 2376 7028 17043 19698 19698 1 GFFVQPTVFSNVTDEMR Unmodified 1972.9353 0.93529784 1447 P24549;O35945 Aldh1a1;Aldh1a7 Retinal dehydrogenase 1;Aldehyde dehydrogenase, cytosolic 1 yes no 0 0 0 0 8.5 0.5 1 1 84.63 84.63 3 3.2313E-06 29389 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.12 61.777 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 5162 7300 1447 7029 17044;17045 19699;19700 19700 2 GFFWSTVPGAGR Unmodified 1280.6302 0.63020611 2641 Q8R1F6 Hid1 Protein HID1 yes yes 0 0 0 0 8 4.97 1 1 1 73.504 73.504 2 1.5558E-05 19034 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.06 81.921 9.51 96.696 96.573 60.159 55.796 28.256 9 93 93 56 56 28 1 2 1 2 1 1 15353 7301 2641 7030 17046;17047;17048 19701;19702;19703 19703 3 GFGDSFGR Unmodified 841.37187 0.37186616 521 G8JL68;A2ATP5;A2ATP6;Q8C854 Myef2 Myelin expression factor 2 yes no 0 0 0 0 6 0 1 49.278 49.278 2 0.045882 15003 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.313 29.679 108.97 0 79.519 0 0 127.92 102 0 74 0 0 120 1 0 1 0 0 1 6230.2 7302 521 7031 17049 19704 19704 1 GFGFGLVK Unmodified 823.45922 0.4592246 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5;D3YUN8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 71.302 71.302 2 0.0010516 21212 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.21 57.478 7310.4 1885.5 7051.7 7095.4 1502 5345.8 6861 2129 6948 6902 1682 5055 5 3 5 5 3 5 769000 7303 2096 7032 17050;17051;17052;17053;17054 19705;19706;19707;19708;19709 19706 5 GFGFGQGAGALVHSE Unmodified 1432.6735 0.67352749 1842 P97315 Csrp1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 0 9.4 3.01 1 1 1 2 65.11 65.11 2;3 3.2963E-05 21714 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.327 58.12 237.52 171.92 364.79 320.95 501.59 453.92 223 176 361 318 505 438 2 2 5 4 4 4 60964 7304 1842 7033 17055;17056;17057;17058;17059 19710;19711;19712;19713;19714 19711 5 GFGFILFK Unmodified 927.52182 0.52182486 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 6.75 5.76 2 1 1 88.872 88.872 2 0.0020578 32801 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 129.96 69 174.11 36.262 188.93 191.11 215.04 159.63 163 38 181 184 212 152 5 2 5 5 5 3 18151 7305 1906 7034 17060;17061;17062;17063 19715;19716;19717;19718;19719;19720;19721 19719 7 GFGFVCFSSPEEATK Unmodified 1661.7396 0.73955814 1484;549 P29341;Q9D4E6;A2A5N3;Q62029;Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9 Pabpc1;Pabpc6;Pabpc1l;Pabpc2;Pabpc4 Polyadenylate-binding protein 1;Polyadenylate-binding protein no no 0 0 0 0 8 0 1 74.903 74.903 4 0.0050487 25621 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.813 24.235 30.044 0 0 30.079 27.906 0 28 0 0 28 28 0 1 0 0 1 1 0 1424.5 7306 1484;549 7035 17064 19722 19722 1 GFGFVDFNSEEDAK Unmodified 1560.6733 0.67325272 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 9.5 3.5 1 1 74.028 74.028 2;3 5.7712E-17 27897 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.44 91.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7307 1333 7036 17065;17066 19723;19724 19724 2 GFGFVLFK Unmodified 913.50617 0.5061748 2079;668;3370 D3YTQ3;F6VQH5;Q9D3U4;Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6;Q9Z130 Hnrnpdl;Rbm31y;Hnrnpd Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 7.57 5.7 3 2 2 85.347 85.347 2;3 0.00070443 30027 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 149.92 93.412 1011.8 725.23 1294.6 658.47 569.14 1126.5 951 715 1242 630 565 1065 9 13 10 9 8 10 183190 7308 668;2079;3370 7037 17067;17068;17069;17070;17071;17072;17073 19725;19726;19727;19728;19729;19730;19731;19732;19733;19734;19735;19736;19737;19738;19739;19740;19741;19742 19725 18 GFGFVSFER Unmodified 1044.5029 0.50288033 1484 P29341;Q9D4E6;Q62029 Pabpc1;Pabpc6;Pabpc2 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 0 8 0 1 69.942 69.942 2 0.010724 23339 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.486 48.263 99.221 0 95.527 103.23 136.03 134.7 93 0 93 102 139 130 1 0 1 1 1 1 8595.6 7309 1484 7038 17074 19743 19743 1 GFGFVTFDDHDPVDK Unmodified 1694.7577 0.75765105 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 6 0.816 1 1 1 71.244 71.244 3;4 7.0365E-06 26005 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.652 60.328 275.76 315.69 422.19 291.9 518.82 248.97 260 318 421 292 517 240 3 3 4 3 4 3 101080 7310 1271 7039 17075;17076;17077 19744;19745;19746;19747 19744 4 GFGFVTFENIDDAK Unmodified 1558.7304 0.73037367 1677 P60824;K4DI65;D3YU80 Cirbp Cold-inducible RNA-binding protein yes no 0 0 0 0 7 0 1 81.852 81.852 3 6.3263E-05 29548 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.204 59.723 38.942 75.04 64.039 35.75 46.474 0 37 74 65 37 46 0 1 1 1 1 1 0 2925.6 7311 1677 7040 17078 19748 19748 1 GFGFVTYATVEEVDAAMNAR Unmodified 2146.9994 0.99935466 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 7 0.707 1 2 1 94.059 94.059 3 1.953E-08 34066 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.688 64.03 19.227 0 14.701 8.9608 9.414 14.924 18 0 14 9 9 14 2 0 1 1 1 1 4537.2 7312 1586 7041 17079;17080;17081;17082 19749;19750;19751;19752 19752 4 GFGFVYFQSHDAADK Unmodified 1687.7631 0.76307078 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 10.5 2.5 1 1 66.274 66.274 3 0.0010626 21856 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.981 30.99 118.39 0 119.51 0 0 138.58 111 0 111 0 0 130 1 0 1 0 0 1 9681.8 7313 2985 7042 17083;17084 19753;19754 19753 2 GFGGIYGVGK Unmodified 953.49707 0.49706667 998 F6T2H5;Q6NSR8 Npepl1 Probable aminopeptidase NPEPL1 yes no 0 0 0 0 10 0 1 62.219 62.219 2 0.00030249 17009 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.265 48.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7314 998 7043 17085 19755 19755 1 GFGGPFCVPVVPLPSILK Unmodified 1883.0379 0.037912416 2089 Q60841 Reln Reelin yes yes 0 0 0 0 12 0 1 98.21 98.21 3 0.0024944 28099 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.813 36.909 5.2434 24.118 0 15.302 0 0 5 23 0 14 0 0 1 1 0 1 0 0 1326.1 7315 2089 7044 17086 19756 19756 1 GFGHIGIAVPDVYSACK Unmodified 1789.8821 0.88214006 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 10 0.816 1 1 1 68.669 68.669 3;4 1.4786E-06 22029 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.64 75.908 270.5 223.36 250.39 265.74 187.19 69.29 254 231 256 260 189 65 1 2 2 2 1 1 38532 7316 2897 7045 17087;17088;17089 19757;19758;19759 19757 3 GFGPIFEEQPINTIYPEESLEGK Unmodified 2593.2588 0.25880005 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 5 0 1 87.792 87.792 3 1.8148E-07 33545 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.228 47.331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7317 1362 7046 17090 19760 19760 1 GFGSDKESILELITSR Unmodified 1750.9101 0.91012895 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 1 8.5 0.5 1 1 83.025 83.025 3 3.6425E-05 29539 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.409 59.536 205.83 169.24 248.14 226.46 132.37 243.53 194 176 249 223 139 232 3 3 3 3 2 3 20492 7318 1050;1380 7047 17091;17092 19761;19762;19763 19761 3 GFGTDEQAIVDVVSNR Unmodified 1705.8271 0.8271276 372 Q07076;A0A2C9F2D2;A0A286YCW4 Anxa7 Annexin A7 yes no 0 0 0 0 5 0.816 1 1 1 73.318 73.318 3 3.1415E-06 26854 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.805 53.681 62.754 37.355 80.162 116.49 56.389 58.445 59 37 77 111 58 56 3 1 3 3 2 1 24637 7319 372 7048 17093;17094;17095 19764;19765;19766;19767 19764 4 GFIGPGIDVPAPDMSTGER Unmodified 1914.9146 0.9145624 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 73.782 73.782 2;3 1.1535E-10 26736 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.92 73.19 98.943 70.69 82.211 64.091 109.21 115.21 93 74 83 65 111 111 1 1 1 1 1 1 16516 7320 1458 7049 17096;17097 19768;19769 19768 2 GFIMAEVMK Unmodified 1024.5086 0.50855934 2999 Q9CZ30;Q99K73 Ola1;Nrf1 Obg-like ATPase 1 yes no 0 0 0 0 10 0 1 74.032 74.032 2 0.0087194 22379 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.825 42.863 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7321 2999 7050 17098 19770 19770 1 GFIPDTPIGVAHFLLQR Unmodified 1880.0309 0.030853204 1918 Q3TES0;A0A0N4SWH8 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes no 0 0 0 0 10.5 0.5 1 1 88.357 88.357 3 4.4793E-06 28605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.692 59.526 9.657 0 0 0 18.538 47.913 9 0 0 0 19 46 1 0 0 0 1 2 7107.9 7322 1918 7051 17099;17100 19771;19772;19773 19772 3 GFITIVDVQR Unmodified 1146.6397 0.63970816 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9 0 1 69.388 69.388 2 0.00018867 22296 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.033 64.912 108.91 0 89.257 0 0 78.884 102 0 83 0 0 74 1 0 1 0 0 1 10216 7323 2179 7052 17101 19774 19774 1 GFKDQIYDIFQK Unmodified 1500.7613 0.76127986 1679 P60843 Eif4a1 Eukaryotic initiation factor 4A-I yes yes 0 0 0 1 9.8 0.748 2 2 1 77.143 77.143 3;4 6.1906E-05 23673 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.766 68.444 363.48 389.8 506.95 353.6 413.37 191.28 342 398 500 352 417 185 4 5 4 4 4 2 38213 7324 1679 7053 17102;17103;17104;17105;17106 19775;19776;19777;19778;19779;19780 19778 6 GFKDQIYEIFQK Unmodified 1514.7769 0.77692993 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 1 10.6 1.36 1 2 1 1 78.411 78.411 3;4 0.00049253 24396 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.96 60.296 505.33 628.91 478.89 417.23 518.76 769.77 475 630 474 407 522 736 5 6 5 4 4 7 65440 7325 1345 7054 17107;17108;17109;17110;17111 19781;19782;19783;19784;19785;19786;19787 19783 7 GFKFDTDELNFPTEK Unmodified 1786.8414 0.84138068 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 7 0.816 1 1 1 72.999 72.999 3;4 0.0010424 25372 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.716 41.885 127.94 26.473 116.04 222.72 168.89 144.93 120 28 111 213 176 139 2 1 1 3 3 2 26399 7326 2253 7055 17112;17113;17114 19788;19789;19790 19789 3 GFLANEQYGALRPDLAEK Unmodified 1991.0112 0.011239973 3246 Q9JM14;A2A9X5 Nt5c 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 1 6.67 0.471 1 2 67.184 67.184 3;4 1.2131E-06 22604 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.993 66.263 325.62 323.2 182.23 249.11 265.85 461.9 306 324 185 241 269 445 5 4 3 4 3 6 20342 7327 3246 7056 17115;17116;17117 19791;19792;19793;19794;19795;19796 19793 6 GFLEFVEDFIQVPR Unmodified 1694.8668 0.86680757 92 A0A0G2JEP0;Q61584;A0A0H2UH27 Fxr1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 0 9 0 1 110.08 110.08 3 3.1996E-05 37570 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.469 60.042 0 0 9.5198 4.8976 0 9.594 0 0 9 5 0 9 0 0 1 1 0 1 823.55 7328 92 7057 17118 19797 19797 1 GFLFGPSLAQELGVGCVLIR Unmodified 2132.1452 0.14523103 1323 P08030 Aprt Adenine phosphoribosyltransferase yes yes 0 0 0 0 11.5 0.5 1 1 100.14 100.14 3 2.763E-39 28436 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 151.04 126.76 6.408 11.223 2.9297 19.625 2.5811 15.916 6 11 3 18 3 15 1 2 1 2 1 3 11554 7329 1323 7058 17119;17120 19798;19799;19800;19801 19800 4 GFLGVMPAYSAAEDALTTK Unmodified 1940.9554 0.95536458 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 9.6 1.85 2 1 1 1 86.634 86.634 3;4 1.0737E-19 33941 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 129.36 104.04 208.66 77.944 175.64 185.52 150.59 338.94 195 75 167 177 162 321 3 3 3 4 4 5 105860 7330 1223 7059 17121;17122;17123;17124;17125 19802;19803;19804;19805;19806;19807;19808;19809 19809 8 GFLIDGYPR Unmodified 1036.5342 0.53418046 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 8 0 1 65.148 65.148 2 0.0016641 21108 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.442 60.223 0 78.736 0 71.045 0 59.696 0 74 0 65 0 56 0 1 0 1 0 1 8931.4 7331 2792 7060 17126 19810 19810 1 GFLPSWLR Unmodified 974.53379 0.53378653 3070 Q9D6D0 Slc25a27 yes yes 0 0 0 0 12 0 1 77.534 77.534 2 0.031032 20912 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.715 32.909 48.999 0 60.345 0 0 0 46 0 56 0 0 0 1 0 1 0 0 0 7726.9 7332 3070 7061 17127 19811 19811 1 GFLSDLLK Unmodified 891.50657 0.50656873 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 10 0.816 1 1 1 81.058 81.058 2 7.4832E-05 25560 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 160.19 83.287 704.33 393.93 674.02 484.11 2053 0 662 412 668 515 1984 0 2 1 2 2 2 0 117690 7333 1892 7062 17128;17129;17130 19812;19813;19814 19813 3 GFLSDLLKK Unmodified 1019.6015 0.60153174 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 1 12 0 1 73.534 73.534 3 0.0056671 19171 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.985 34.276 99.789 0 0 76.797 217.18 0 93 0 0 74 211 0 1 0 0 1 1 0 18606 7334 1892 7063 17131 19815 19815 1 GFLSGPMGSGMR Unmodified 1195.5478 0.54779839 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 10 0 1 61.446 61.446 2 0.013274 16713 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.471 23.907 34.024 17.289 37.841 22.092 42.116 23.316 32 19 37 23 42 23 1 1 1 1 1 1 3067.7 7335 521 7064 17132 19816 19816 1 GFLVMGSK Unmodified 837.44186 0.44185998 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 12 1 1 1 63.858 63.858 2 0.0051541 17276 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.6 69.29 283.05 174.63 250.49 157.77 0 0 266 186 249 158 0 0 1 1 1 1 0 0 50055 7336 526 7065 17133;17134 19817;19818 19817 2 GFNEGLWEIENNPGVK Unmodified 1801.8635 0.8635131 3252 Q9JMG7 Hdgfrp3 Hepatoma-derived growth factor-related protein 3 yes yes 0 0 0 0 9 4 1 1 74.742 74.742 3;4 7.6915E-06 27734 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.391 62.712 20.387 29.792 0 60.563 71.983 76.83 19 28 0 56 74 74 1 1 0 1 2 2 7478.9 7337 3252 7066 17135;17136 19819;19820 19819 2 GFPGYMYTDLATIYER Unmodified 1895.8764 0.87638598 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 9 2.1 1 2 1 1 84.863 84.863 2;3 4.1158E-18 30489 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.48 103.15 245.79 119.23 83.507 186.54 140.61 97.066 232 122 83 176 139 93 7 4 3 5 3 3 81732 7338 1741 7067 17137;17138;17139;17140;17141 19821;19822;19823;19824;19825;19826;19827;19828 19824 8 GFPLVTVQR Unmodified 1015.5815 0.581465 2488 Q8C129 Lnpep Leucyl-cystinyl aminopeptidase yes yes 0 0 0 0 10 0 1 61.171 61.171 2 0.0085031 16652 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.282 52.947 0 63.095 44.577 31.643 35.929 38.417 0 60 46 32 37 37 0 1 1 1 1 1 4884.7 7339 2488 7068 17142 19829 19829 1 GFPTIYFSPANK Unmodified 1340.6765 0.6764876 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 11 0.816 1 1 1 74.333 74.333 2;3 7.856E-06 19470 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.214 73.46 105.51 91.124 42.645 142.8 175.88 78.656 99 93 43 136 177 77 2 2 1 3 3 2 49623 7340 1470 7069 17143;17144;17145 19830;19831;19832 19832 3 GFPTIYFSPANKK Unmodified 1468.7715 0.77145062 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 1 6.5 5.5 1 1 66.753 66.753 3 6.5621E-11 16458 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 118.76 94.567 358.2 315.5 303.79 293.09 307.17 44.562 337 324 312 290 308 43 2 2 2 2 2 1 37794 7341 1470 7070 17146;17147 19833;19834 19834 2 GFPTWLK Unmodified 847.45922 0.4592246 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 11 0 1 71.121 71.121 2 0.038508 20685 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.597 40.055 0 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 45161 7342 1451 7071 17148 19835 19835 1 GFPVVLDSPR Unmodified 1085.5869 0.58694431 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 8 0 1 64.365 64.365 2 0.059255 20589 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.193 15.574 127.59 98.026 113.58 0 101.7 145.27 120 102 111 0 102 139 1 1 1 0 1 1 4957.4 7343 1893 7072 17149 19836 19836 1 GFQQILAGEYDHLPEQAFYMVGPIEEAVAK Unmodified 3349.6329 0.63291481 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 98.155 98.155 4 1.6154E-43 35794 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.2 114.12 127.77 161.68 132.96 81.966 144.52 146.93 120 164 132 83 147 141 6 7 5 4 6 5 52309 7344 1642 7073 17150;17151;17152;17153;17154 19837;19838;19839;19840;19841;19842;19843;19844;19845;19846 19837 10 GFQQILAGEYDHLPEQAFYMVGPIEEAVAK Oxidation (M) 3365.6278 0.62782943 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 1 0 6.5 0.5 1 1 90.146 90.146 4 6.0071E-26 34024 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.65 70.797 29.87 0 29.321 23.802 36.29 38.406 28 0 28 24 37 37 1 0 1 2 2 2 3997.9 7345 1642 7073 17155;17156 19847;19848 19847 111 2 GFQQWLVNAK Unmodified 1189.6244 0.62439245 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 11 0 1 71.861 71.861 3 0.024091 20931 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.863 20.877 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 3203.5 7346 305 7074 17157 19849 19849 1 GFSDEDNTWEPEENLDCPDLIAEFLQSQK Unmodified 3425.4882 0.48816065 1831 Q7TPM0;Q9CYJ8;P83917 Cbx1 Chromobox protein homolog 1 yes no 0 0 0 0 5 0 1 100.23 100.23 4 0.0010526 35991 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.67 26.433 0 0 0 0 5.1618 1.9847 0 0 0 0 5 2 0 0 0 0 1 1 917.12 7347 1831 7075 17158 19850 19850 1 GFSEGLWEIENNPTVK Unmodified 1818.8788 0.87882882 1605 P51859;E0CXA0;E0CYW7 Hdgf Hepatoma-derived growth factor yes no 0 0 0 0 7 0 1 77.037 77.037 3 0.018892 27170 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.77 21.647 0 0 48.146 36.501 56.899 0 0 0 46 37 56 0 0 0 1 1 1 0 2742.1 7348 1605 7076 17159 19851 19851 1 GFSIVTDTPELQR Unmodified 1461.7464 0.74635808 3134 Q9DC07 Nebl LIM zinc-binding domain-containing Nebulette yes yes 0 0 0 0 7 0 1 66.392 66.392 3 0.004555 22208 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.46 17.962 0 39.368 0 0 37.384 38.375 0 37 0 0 37 37 0 1 0 0 1 1 2752.4 7349 3134 7077 17160 19852 19852 1 GFSLSDVPQAEISGEHLR Unmodified 1940.9592 0.9592044 3293 Q9QZF2 Gpc1 Glypican-1;Secreted glypican-1 yes yes 0 0 0 0 5.5 0.5 1 1 64.743 64.743 3 1.5008E-06 22264 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.184 51.533 0 78.133 36.049 77.684 55.819 59.696 0 74 37 74 55 56 0 2 1 2 1 1 7138.6 7350 3293 7078 17161;17162 19853;19854 19854 2 GFSMPGFLFK Unmodified 1129.563 0.56303775 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 0 12 0 1 86.066 86.066 2 0.0058036 24074 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.464 22.61 29.783 0 43.803 33.458 0 0 28 0 42 33 0 0 1 0 1 1 0 0 4272.9 7351 1894 7079 17163 19855 19855 1 GFSPQHK Unmodified 799.39769 0.39768698 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 9.5 1.71 1 1 1 1 1 1 33.815 33.815 3 0.0025263 6480 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.9 36.964 2118.2 2145.4 2615.6 1908.3 1960.9 2634.9 1998 2182 2620 1919 2045 2522 5 5 5 5 6 4 241230 7352 1786 7080 17164;17165;17166;17167;17168;17169 19856;19857;19858;19859;19860;19861;19862 19857 7 GFSSGSAVVSGGSR Unmodified 1253.6 0.60002819 662 CON__P35908v2;CON__P35908 no no 0 0 0 0 9.33 2.62 1 1 1 42.383 42.383 2 1.534E-22 10349 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 143.22 103.51 49.982 85.22 46.973 7.4737 36.344 58.659 47 84 47 9 37 56 2 3 2 1 1 1 9885.7 + 7353 662 7081 17170;17171;17172 19863;19864;19865 19864 3 GFSVVADTPELQR Unmodified 1417.7201 0.72014333 2140 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8;A2A6G6;A2A6H1 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 8 3.56 1 1 1 62.412 62.412 2;3 2.7027E-07 21974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.39 68.984 109.36 0 194.29 143.95 47.137 167.08 103 0 186 139 46 158 3 0 3 2 1 3 25062 7354 2140 7082 17173;17174;17175 19866;19867;19868 19866 3 GFTDADNTWEPEENLDCPELIEAFLNSQK Unmodified 3381.4983 0.4983314 3141 Q9DCC5;D3Z313 Cbx3 yes no 0 0 0 0 5.5 0.5 1 1 99.938 99.938 4 2.3315E-18 35972 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.474 62.144 9.5727 12.057 3.9447 4.2617 5.8663 12.625 9 12 4 4 6 12 2 2 1 1 1 2 3790.8 7355 3141 7083 17176;17177 19869;19870 19869 2 GFTLNDAANSLLIIR Unmodified 1616.8886 0.88860564 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10 0 1 85.998 85.998 3 0.019564 27532 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.143 31.419 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2536.8 7356 2235 7084 17178 19871 19871 1 GFTPLHVAAK Unmodified 1039.5815 0.581465 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;G5E8J2;D3Z5M4;D3YTV8;G8JL84;E9QNT8;B7ZW98;A0A0R4J1N7;G3UY11;Q02357;Q0VGY9;F7D1P5;S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank3;Ank1;Ank2 Ankyrin-3;Ankyrin-1;Ankyrin-2 no no 0 0 0 0 10 0 1 51.181 51.181 3 0.00031099 12155 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.886 59.228 128.11 129.68 0 157.89 206.13 0 120 130 0 148 204 0 1 1 0 1 1 0 13076 7357 3450;3449;3451;3452 7085 17179 19872 19872 1 GFTPYYAR Unmodified 973.46577 0.46576654 2957 Q9CR62 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 0 0 0 0 8 0 1 50.941 50.941 2 0.041652 14302 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.032 54.405 79.128 54.248 0 71.045 0 0 74 56 0 65 0 0 1 1 0 1 0 0 5049.8 7358 2957 7086 17180 19873 19873 1 GFVAGATNILFR Unmodified 1264.6928 0.69280637 2313 Q80U56 Avl9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 0 8 4.97 1 1 1 76.048 76.048 2 1.788E-07 22614 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.45 72.647 39.392 16.931 114.26 215.47 36.771 147.12 37 19 111 204 37 139 1 1 2 3 1 2 26732 7359 2313 7087 17181;17182;17183 19874;19875;19876 19875 3 GFVEFAAKPPAR Unmodified 1288.6928 0.69280637 2658 Q8R326 Pspc1 Paraspeckle component 1 yes yes 0 0 0 1 10 0 1 55.838 55.838 3 0.0001046 14062 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.805 66.569 88.289 0 129.39 0 0 78.884 83 0 120 0 0 74 1 0 1 0 0 1 14327 7360 2658 7088 17184 19877 19877 1 GFVEIQTPK Unmodified 1017.5495 0.54949617 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10 3 1 1 59.394 59.394 2;3 0.0012636 19142 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.239 48.867 168.57 105.52 72.571 75.229 134.93 204.02 158 111 74 74 139 195 2 2 1 1 2 2 9493.9 7361 2803 7089 17185;17186 19878;19879 19878 2 GFVFITFK Unmodified 957.53239 0.53238955 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 12 0 1 83.224 83.224 2 0.022972 23101 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.26 44.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7362 1906 7090 17187 19880 19880 1 GFVLLPK Unmodified 772.48471 0.48471107 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 0 11.5 0.5 1 1 70.182 70.182 2 0.017943 17762 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.88 60.534 148.26 187.26 149.65 169.27 307.74 163.23 139 176 139 158 307 158 1 1 1 1 2 1 55490 7363 3053 7091 17188;17189 19881;19882 19882 2 GFVPDTPVGVAHFLLQR Unmodified 1851.9996 0.99955308 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 10 0 1 82.526 82.526 3 0.00051187 26137 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.317 37.287 0 0 49.772 0 0 49.036 0 0 46 0 0 46 0 0 1 0 0 1 6533.3 7364 281 7092 17190 19883 19883 1 GFVPFLVSATAGTTVYGAFDPLLAVADICK Unmodified 3099.5991 0.59909549 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 11 0 1 117.21 117.21 4 0.052439 37031 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 21.771 15.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1180.1 7365 1579 7093 17191 19884 19884 1 GFVVGYDTR Unmodified 1012.4978 0.49779495 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 9.33 2.62 1 1 1 54.834 54.834 2 0.0019171 18323 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.368 47.34 157.97 64.479 84.726 204.11 211.17 65.61 148 65 83 195 213 65 2 1 1 2 2 1 27057 7366 2513 7094 17192;17193;17194 19885;19886;19887 19887 3 GFWLSQWK Unmodified 1050.5287 0.52870115 3150 Q9DCS3 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 12 0 1 78.784 78.784 2 0.0028872 21238 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.96 82.935 0 56.392 0 0 37.164 44.778 0 53 0 0 37 43 0 1 0 0 1 1 5576.3 7367 3150 7095 17195 19888 19888 1 GFYEALFDGHPPGK Unmodified 1533.7252 0.72522871 203 A0A0R4J1E2;F6ZFU0 Eef1d yes no 0 0 0 0 8 0 1 70.629 70.629 3 0.0010753 23709 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.898 37.7 58.797 0 36.67 68.859 0 69.29 55 0 37 65 0 65 1 0 1 1 0 1 4035 7368 203 7096 17196 19889 19889 1 GFYYLMQELPQER Unmodified 1672.7919 0.79192807 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 13 0 1 80.873 80.873 3 0.0013849 31270 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.155 45.476 29.753 0 48.866 16.964 47.337 0 28 0 46 19 46 0 1 0 1 1 1 0 4609.7 7369 162 7097 17197 19890 19890 1 GGADMFVENMPGFPDNIR Oxidation (M) 1981.8662 0.866232 3081 Q9D7N9 Apmap Adipocyte plasma membrane-associated protein yes yes 0 0 1 0 3 0 1 53.506 53.506 3 0.050645 18269 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.912 15.438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7370 3081 7098 17198 19891 19891 193 1 GGAEGELQALR Unmodified 1099.5622 0.56218613 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 48.811 48.811 2 5.8183E-05 15731 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.254 56.679 0 58.467 66.822 0 66.005 57.813 0 56 65 0 65 56 0 1 1 0 1 1 6529.9 7371 3266 7099 17199 19892 19892 1 GGAEQFMEETER Unmodified 1382.5772 0.57724384 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 2.5 0.5 1 1 52.134 52.134 3 0.0019545 17139 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.951 45.159 29.952 18.196 0 0 19.874 0 28 19 0 0 19 0 1 1 0 0 1 0 8085.5 7372 1822 7100 17200;17201 19893;19894 19893 2 GGAEVQIFAPDVPQMHVIDHTK Unmodified 2388.1896 0.18961504 3037 Q9D172;A0A1W2P7B6 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 7.67 3.77 2 1 66.664 66.664 4;5 6.3603E-16 24011 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.22 66.658 139.26 0 67.242 208.2 49.101 116.92 130 0 65 195 56 111 2 0 2 3 1 2 20927 7373 3037 7101 17202;17203;17204 19895;19896;19897 19896 3 GGAGFPTGLK Unmodified 903.48142 0.48141661 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5;D6RG60 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 10 1.87 1 1 1 1 55.912 55.912 2;3 2.6858E-05 16684 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.82 78.823 235.78 226.09 354.45 205.49 156.13 113.87 222 233 348 202 153 111 2 3 2 1 2 2 33144 7374 680 7102 17205;17206;17207;17208 19898;19899;19900;19901 19898 4 GGAGGGPGGSGGGSSQR Unmodified 1301.5709 0.57085333 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 19.518 19.518 3 7.7442E-07 2713 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.102 67.121 0 0 14.083 7.3481 0 2 0 0 14 7 0 2 0 0 2 1 0 1 3355.9 7375 2594 7103 17209;17210;17211 19902;19903;19904 19903 3 GGAGGGPSGD Unmodified 730.2882 0.28819611 1674 P60761 Nrgn Neurogranin;NEUG(55-78) yes yes 0 0 0 0 5.33 5.44 1 1 1 24.352 24.352 2 4.6879E-05 4323 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.46 109.23 456.97 751.39 285.65 824.66 693.17 651.52 431 734 325 782 719 627 6 3 1 6 6 5 592250 7376 1674 7104 17212;17213;17214 19905;19906;19907;19908;19909;19910;19911 19906 7 GGALHADAQLYADR Unmodified 1456.7059 0.70589025 912 S4R1C6;E9Q5C0;E9Q835;Q8BYR5;F6SH36 Cadps2 Calcium-dependent secretion activator 2 yes no 0 0 0 0 4 0 1 44.194 44.194 3 0.062079 13552 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 31.827 17.864 30.044 0 0 20.234 28.359 0 28 0 0 19 28 0 1 0 0 1 1 0 2956.5 7377 912 7105 17215 19912 19912 1 GGAPAGVEAR Unmodified 883.45118 0.45117911 2277 Q791T5 Mtch1 Mitochondrial carrier homolog 1 yes yes 0 0 0 0 4 0 1 30.403 30.403 2 5.6557E-07 7096 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135 89.663 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 6663.1 7378 2277 7106 17216 19913 19913 1 GGAPGQAPGALPGPGLVK Unmodified 1542.8518 0.85182621 895 E9Q3M3;O08788 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 8 0 1 60.557 60.557 3 0.0076228 18881 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.982 16.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7379 895 7107 17217 19914 19914 1 GGASDALLYR Unmodified 1021.5193 0.51925868 1583 P48771 Cox7a2 Cytochrome c oxidase subunit 7A2, mitochondrial yes yes 0 0 0 0 6 1 1 1 49.068 49.068 2 6.0487E-05 15488 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.3 66.074 167.5 162.99 291.19 195.78 0 187.62 158 167 287 195 0 176 2 2 3 3 0 2 49808 7380 1583 7108 17218;17219 19915;19916;19917 19915 3 GGATPPALLLLLSR Unmodified 1377.8344 0.83438523 2011 Q3UVL4 Vps51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 0 12 0 1 87.804 87.804 2 0.0040701 24826 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.705 36.103 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 4695.7 7381 2011 7109 17220 19918 19918 1 GGCEAIVDTGTSLLVGPVEEVK Unmodified 2229.1199 0.11986372 1049 F8WIR1;P18242;F6Y6L6;A0A1B0GT66 Ctsd Cathepsin D yes no 0 0 0 0 4.8 0.748 2 2 1 82.806 82.806 3;4 2.998E-18 31550 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.71 92.943 147.11 92.758 147.62 152.18 137.74 155.96 138 92 148 149 139 149 4 4 5 4 4 5 24376 7382 1049 7110 17221;17222;17223;17224;17225 19919;19920;19921;19922;19923;19924 19923 6 GGDEYDNHCGK Unmodified 1250.4622 0.46221408 1448 P24668 M6pr Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 0 3 0 1 30.502 30.502 3 0.0032847 7680 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.836 45.671 48.916 35.328 44.359 68.401 0 49.036 46 37 46 65 0 46 1 1 1 1 0 1 3189.4 7383 1448 7111 17226 19925 19925 1 GGDGVVR Unmodified 658.33984 0.33983775 2574 Q8K010 Oplah 5-oxoprolinase yes yes 0 0 0 0 1 0 1 77.362 77.362 1 0.064299 26840 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 23.795 7.6883 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 1111.6 7384 2574 7112 17227 19926 19926 1 GGDLFDAITSTSK Unmodified 1310.6354 0.63541065 102 A0A0G2JGQ6;Q9JLM8;A0A0G2JE54;Q8CCN4;A0A0G2JGH1;Q1EDH1;H7BX36;A0A0G2JEN4 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 10 3 1 1 73.192 73.192 2;3 0.00048339 25500 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.289 9.5294 40.323 45.605 86.866 0 95.951 38.644 38 46 83 0 93 37 1 1 2 0 2 1 9006.4 7385 102 7113 17228;17229 19927;19928 19927 2 GGDLMAYDR Unmodified 996.43348 0.43348014 613 B2M1R6;P61979;H3BLL4;H3BLP7 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 5 0 1 48.476 48.476 2 0.0054596 15238 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.456 55.714 0 58.304 76.57 0 74.768 76.75 0 56 74 0 74 74 0 1 1 0 1 1 4938.2 7386 613 7114 17230 19929 19929 1 GGDLPSNK Unmodified 786.38718 0.38718187 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 6 0 1 38.513 38.513 2 0.013464 9952 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.181 54.061 0 69.16 0 0 0 88.478 0 65 0 0 0 83 0 1 0 0 0 1 6986 7387 20;2354 7115 17231 19930 19930 1 GGDPALIR Unmodified 797.43955 0.43955179 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 5 0 1 41.398 41.398 2 0.050818 11872 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.306 32.017 39.317 76.085 0 29.572 54.892 67.724 37 74 0 28 56 65 1 1 0 1 1 1 5028 7388 1460 7116 17232 19931 19931 1 GGDPTKEPEPVVHYDI Unmodified 1751.8366 0.83662965 3073 Q9D6J5 Ndufb8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes yes 0 0 0 1 4 0 1 56.268 56.268 3 3.0663E-05 19282 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.143 59.598 138.68 154.86 233.08 178.48 0 187.62 130 158 232 176 0 176 1 2 2 2 0 2 16352 7389 3073 7117 17233 19932;19933 19933 2 GGDRVPADLR Unmodified 1054.552 0.55195579 106;2253 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7 Atp1a3;Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 1 3.5 0.5 1 1 34.395 34.395 3 3.7781E-05 8805 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.95 0 1348.8 207.17 1438.2 920.98 337.3 1485.5 1266 215 1379 905 333 1401 4 1 2 3 2 2 244300 7390 106;2253 7118 17234;17235 19934;19935;19936;19937 19936 4 GGDVSVCEWYR Unmodified 1326.5663 0.56628523 1639 P56391;A0A140LIU3 Cox6b1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 57.409 57.409 2 3.1976E-08 18879 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.03 102.48 304.45 313.74 330 400.95 411.82 384.04 286 315 325 389 418 370 4 4 4 4 4 4 121540 7391 1639 7119 17236;17237;17238;17239 19938;19939;19940;19941;19942 19940 5 GGEAEEPVPK Unmodified 1011.4873 0.48728985 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 3 0 1 41.01 41.01 3 0.0038969 12487 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.757 31.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7392 1275 7120 17240 19943 19943 1 GGEAEEPVPKPYSQDLSR Unmodified 1957.9381 0.93813461 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 4 0.816 1 1 1 49.642 49.642 3 5.3419E-07 16050 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.925 62.983 20.292 8.0547 9.1524 56 28.291 29.041 19 9 9 56 28 28 1 1 1 1 1 1 10826 7393 1275 7121 17241;17242;17243 19944;19945;19946 19945 3 GGEELDGFEGEASSTSMISGASSPYQPTTEPVSQR Unmodified 3587.5846 0.58458023 2560 Q8CJ61 Cmtm4 CKLF-like MARVEL transmembrane domain-containing protein 4 yes yes 0 0 0 0 3 0 1 70.478 70.478 4 0.00276 26072 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 30.909 25.006 20.387 0 0 0 9.0934 9.3345 19 0 0 0 9 9 1 0 0 0 1 1 1029 7394 2560 7122 17244 19947 19947 1 GGELGLAMASFLK Unmodified 1292.6799 0.67985842 3282;1240 O55137;Q9QYR9 Acot1;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 10 0 1 86.531 86.531 3 0.00094323 27787 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.088 40.215 0 39.368 0 30.604 0 0 0 37 0 28 0 0 0 1 0 1 0 0 5401.3 7395 1240;3282 7123 17245 19948 19948 1 GGELVYTDTEAR Unmodified 1309.615 0.61500956 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3 0.816 1 1 1 47.149 47.149 2;3 0.028404 14853 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.767 16.737 39.613 17.545 7.9576 80.408 0 89.544 37 19 9 74 0 84 1 1 1 2 0 2 7388 7396 3266 7124 17246;17247;17248 19949;19950;19951 19951 3 GGELVYTDTEARDVFEK Unmodified 1927.9163 0.91633654 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 8 0 1 66.057 66.057 4 0.040015 21505 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.624 9.8246 139.49 0 0 169.12 190.04 209.91 130 0 0 158 196 202 1 0 0 1 1 1 20513 7397 3266 7125 17249 19952 19952 1 GGENIYPAELEDFFLK Unmodified 1840.8883 0.88833087 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 92.58 92.58 3 7.9037E-06 34878 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.13 83.122 0 0 16.23 39.373 85.745 9.0357 0 0 15 37 84 9 0 0 1 1 3 1 10551 7398 2688 7126 17250;17251;17252;17253 19953;19954;19955;19956 19953 4 GGEPPGDTFAPFHGYSK Unmodified 1762.7951 0.79509919 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 5.5 0.5 1 1 57.376 57.376 3 0.0036893 18878 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.633 11.244 79.182 43.605 0 0 67.99 0 74 46 0 0 65 0 1 1 0 0 1 0 5013.7 7399 992 7127 17254;17255 19957;19958 19958 2 GGEQAIK Unmodified 701.3708 0.37080353 1765 P63037;B1AXY1;B1AXY0;B1AXX9 Dnaja1 DnaJ homolog subfamily A member 1 yes no 0 0 0 0 5 0 1 35.62 35.62 2 0.031524 9035 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.064 14.796 118.23 89.797 70.785 74.054 138.72 95.179 111 93 74 74 139 93 1 1 1 1 1 1 6891.2 7400 1765 7128 17256 19959 19959 1 GGEQINK Unmodified 744.37662 0.37661719 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 5 0 1 35.114 35.114 2 0.026973 8791 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.55 18.207 0 47.979 57.713 0 75.794 46.873 0 46 56 0 74 46 0 1 1 0 1 1 3317.2 7401 1952 7129 17257 19960 19960 1 GGEQISR Unmodified 745.37187 0.37186616 99 A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8;A0A0G2JFK2;A2AJ72;Q3TIX6;A0A0A6YY39 Fubp1;Fubp3 Far upstream element-binding protein 1 yes no 0 0 0 0 3.5 0.5 1 1 24.573 24.573 2 0.028811 4880 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.119 22.925 0 0 0 80.882 0 59.696 0 0 0 74 0 56 0 0 0 1 0 1 4283.6 7402 99 7130 17258;17259 19961;19962 19961 2 GGEQLAK Unmodified 701.3708 0.37080353 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 6 0 1 37.397 37.397 2 0.064148 9401 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.789 14.185 0 175.19 149.63 0 327.15 190.01 0 167 148 0 319 187 0 1 1 0 1 1 17690 7403 1648 7131 17260 19963 19963 1 GGETTLK Unmodified 704.37047 0.37046918 3277;377 Q9QYG0;A0A2I3BPW0 Ndrg2 Protein NDRG2 no no 0 0 0 0 5.5 0.5 1 1 37.771 37.771 2;3 0.0036677 10062 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.086 26.881 411.69 375.23 461.23 0 557.75 389.16 388 386 449 0 546 380 1 1 1 0 1 1 37637 7404 3277;377 7132 17261;17262 19964;19965 19964 2 GGFDLAFQLAPPK Unmodified 1359.7187 0.71868677 263 A0A1B0GSM1;Q99K23;A0A1B0GQY6;A0A1B0GSY4;A0A1B0GRT2;A0A1B0GSK1 Ufsp2 Ufm1-specific protease 2 yes no 0 0 0 0 9 0 1 80.888 80.888 3 0.05892 27789 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.273 17.049 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2542.6 7405 263 7133 17263 19966 19966 1 GGFFSPWK Unmodified 924.44939 0.4493882 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1;A0A140LHL1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 12 0 1 72.08 72.08 2 0.010179 18589 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.299 55.273 0 58.341 74.343 49.949 72.471 76.816 0 56 74 51 74 74 0 1 1 1 1 1 5290.7 7406 87 7134 17264 19967 19967 1 GGFSETR Unmodified 752.34532 0.34531706 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 4 0 1 30.762 30.762 2 0.027087 7198 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.777 44.01 0 0 0 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 7590.9 7407 526 7135 17265 19968 19968 1 GGGDRYEDR Unmodified 1023.437 0.43698561 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 1 0 1 19.896 19.896 3 0.02127 2990 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.245 29.436 39.701 0 0 45.153 40.03 53.224 37 0 0 42 42 51 1 0 0 1 1 1 3409.3 7408 2377 7136 17266 19969 19969 1 GGGEDFEDTCGELEFQNDEIVK Unmodified 2487.0384 0.038378519 2187 Q68FL0;G5E8Y0;G3X9J1 Slc8a1 yes no 0 0 0 0 2.5 0.5 1 1 72.251 72.251 3 5.775E-20 26943 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.889 82.957 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2017.2 7409 2187 7137 17267;17268 19970;19971 19971 2 GGGELGLQWHADGR Unmodified 1451.6906 0.69057454 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 13 0 1 50.244 50.244 3 0.0069876 16457 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.723 22.348 78.592 62.469 83.259 53.931 123.04 0 74 65 83 56 120 0 1 1 1 1 1 0 5067.1 7410 2490 7138 17269 19972 19972 1 GGGGGGGGGPGGFQPAPR Unmodified 1438.6702 0.67017345 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 0 8 3.56 1 1 1 38.241 38.241 3 2.9521E-26 10386 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.33 112.24 49.633 57.634 143.39 74.046 82.796 48.539 47 56 139 75 84 46 2 1 3 2 2 1 19060 7411 1186 7139 17270;17271;17272 19973;19974;19975 19973 3 GGGGGGGGPGGEQETQELASK Unmodified 1828.8187 0.81874776 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 0 5.5 4.39 1 1 1 1 44.984 44.984 3 1.9197E-12 13874 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.44 83.784 197.38 144.75 65.947 29.463 84.804 118.35 185 148 65 28 83 112 4 3 2 1 2 3 37749 7412 1186 7140 17273;17274;17275;17276 19976;19977;19978;19979 19978 4 GGGGGSSNSTHYQK Unmodified 1335.5804 0.58035539 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 6 0 1 26.239 26.239 3 0.035783 4481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.292 15.911 0 0 9.738 0 29.288 0 0 0 9 0 28 0 0 0 1 0 1 0 1144.7 7413 1481 7141 17277 19980 19980 1 GGGGNFGPGPGSNFR Unmodified 1376.6222 0.62216062 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 46.196 46.196 2;3 4.5099E-22 13646 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 140.16 112.39 250.83 113.61 306.59 150.07 246.94 357.53 236 116 297 153 250 342 4 2 4 3 3 4 51034 7414 1271 7142 17278;17279;17280;17281 19981;19982;19983;19984 19981 4 GGGISSYANDPSR Unmodified 1279.5793 0.57929275 1229 O55026 Entpd2 Ectonucleoside triphosphate diphosphohydrolase 2 yes yes 0 0 0 0 5 0 1 40.192 40.192 2 1.9129E-06 11233 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.499 59.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7415 1229 7143 17282 19985 19985 1 GGGQIIPTAR Unmodified 968.54033 0.54032847 1652;464 P58252;G3UXK8;G3UZ34;A2AH85;O08810 Eef2;Eftud2 Elongation factor 2;116 kDa U5 small nuclear ribonucleoprotein component no no 0 0 0 0 7 0.816 1 1 1 43.002 43.002 2 0.0040619 10498 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.16 52.023 107.61 170.93 33.843 146.69 171.35 144.61 101 168 37 139 175 139 2 3 1 3 3 2 36787 7416 1652;464 7144 17283;17284;17285 19986;19987;19988 19988 3 GGGQITYK Unmodified 822.42357 0.42356738 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97;A0A0G2JES8;H3BK41 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 0 7 0 1 41.417 41.417 2 0.014811 10507 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.743 34.704 127.91 58.993 92.242 94.263 100.41 56.831 120 65 93 93 102 56 1 1 1 1 1 1 4147.1 7417 2968 7145 17286 19989 19989 1 GGGVFTPGAAFSR Unmodified 1222.6095 0.60947067 2635 Q8R127;F6S0R8 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 0 8.5 0.5 1 1 58.354 58.354 2 0.0045179 17855 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.705 30.484 79.126 48.16 93.214 68.284 0 59.696 74 46 92 65 0 56 1 1 2 1 0 1 10309 7418 2635 7146 17287;17288 19990;19991 19990 2 GGGVGGFLPAMK Unmodified 1089.5641 0.56410038 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 9 0 1 68.241 68.241 3 0.00032687 21697 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.893 33.479 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 7920.6 7419 2862 7147 17289 19992 19992 1 GGHVNLTMLGAMQVSK Unmodified 1641.8331 0.83308137 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 10 0 1 63.38 63.38 4 0.002917 17502 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.33 23.132 0 0 49.772 0 46.807 38.106 0 0 46 0 46 37 0 0 1 0 1 1 2486.1 7420 3028 7148 17290 19993 19993 1 GGHVVVQK Unmodified 822.47119 0.47118627 1944 Q3TXX4 Slc17a7 Vesicular glutamate transporter 1 yes yes 0 0 0 0 9.5 2.29 1 1 1 1 1 1 1 1 32.691 32.691 3 0.00069015 7661 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.78 94.264 806.33 715.5 459.45 705.25 693.68 582.73 757 729 465 679 706 557 7 7 4 7 6 6 154690 7421 1944 7149 17291;17292;17293;17294;17295;17296;17297;17298 19994;19995;19996;19997;19998;19999;20000;20001;20002 20002 9 GGIADSVAK Unmodified 816.43413 0.43413207 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 6 0 1 45.737 45.737 2 0.0075533 13371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.692 25.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7422 63 7150 17299 20003 20003 1 GGILANK Unmodified 671.39662 0.39662435 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 10 0 1 47.265 47.265 2 0.038735 10645 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.72 15.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7423 3259 7151 17300 20004 20004 1 GGIMLPEK Unmodified 843.45242 0.45242467 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 57.946 57.946 2 0.0088983 17633 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.64 52.297 259.12 270.39 303.75 412.31 302.73 96.266 243 269 311 399 304 93 2 2 2 3 2 1 50763 7424 2175 7152 17301;17302;17303 20005;20006;20007 20006 3 GGISETR Unmodified 718.36097 0.36096712 1250;3345;369;433 Q80UE5;O70318;Q80UE4;A0A1W2P6H2;A0A1W2P7I2;F7CR30;F7BUB8;F6S4K9;A0A286YDY4;Q9WV92;A7YY80;A0A286YD84;A2A839;A2A838;A2A842;A2A841;P48193 Epb4.1l2;Epb41l2;Epb4.1;Epb41l3;Epb4.1l3;Epb41 Band 4.1-like protein 2;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Protein 4.1 no no 0 0 0 0 4 0.816 1 1 1 26.418 26.418 2 0.016549 4870 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.73 59.428 297.24 102.75 223.99 223.66 357.59 222.77 283 107 223 223 359 217 3 1 3 3 3 2 62557 7425 1250;369;3345;433 7153 17304;17305;17306 20008;20009;20010;20011 20011 4 GGIVDEGALLR Unmodified 1098.6033 0.60332266 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 5.5 0.5 1 1 60.401 60.401 2 0.0016348 20913 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.29 48.734 60.088 47.35 95.373 54.158 177.35 123.93 56 46 93 56 176 121 1 1 1 1 2 2 31981 7426 2138 7154 17307;17308 20012;20013 20012 2 GGIVGMTLPIAR Unmodified 1183.6747 0.67471346 2879 Q99N15;A2AFQ2 Hsd17b10 yes no 0 0 0 0 10 0 1 70.385 70.385 2 1.3719E-11 20699 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.45 51.255 0 0 86.972 63.624 118.98 105.34 0 0 83 65 120 102 0 0 1 1 1 1 11214 7427 2879 7155 17309 20014 20014 1 GGIVSQVK Unmodified 786.45995 0.45995289 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 10 2.16 1 1 1 46.341 46.341 2 0.00334 14329 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.69 44.574 494.38 430.03 477.42 352.35 284.45 458.79 465 443 477 339 287 438 2 3 2 1 2 2 85948 7428 1876 7156 17310;17311;17312 20015;20016;20017 20017 3 GGLALALVGTQDR Unmodified 1269.7041 0.70409934 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 9 0 1 66.74 66.74 3 0.055708 21180 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.685 28.079 0 0 47.659 47.438 0 0 0 0 46 46 0 0 0 0 1 1 0 0 3470.1 7429 1980 7157 17313 20018 20018 1 GGLALLPK Unmodified 767.49052 0.49052473 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 0 10 0 1 63.653 63.653 2 0.030636 17568 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.949 24.043 139.49 0 0 180.43 111.56 165.24 130 0 0 167 120 158 1 0 0 1 1 1 10742 7430 896 7158 17314 20019 20019 1 GGLDNAR Unmodified 701.34565 0.34565141 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 7.33 4.03 1 1 1 26.595 26.595 2 0.010715 4963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.52 58.802 1144.2 881.67 1381.8 987.89 1178.3 1309.5 1076 915 1372 994 1210 1260 3 3 4 3 3 4 427810 7431 1383 7159 17315;17316;17317 20020;20021;20022;20023 20022 4 GGLDWCNAGWLSDGSVQYPITKPR Unmodified 2676.2755 0.27546994 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 1 8.33 0.943 1 2 77.312 77.312 3;4 1.4737E-16 26020 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.078 92.355 108.34 109.69 129.82 83.439 37.043 117.27 102 112 130 83 37 111 2 3 3 2 1 2 22548 7432 3258 7160 17318;17319;17320 20024;20025;20026 20025 3 GGLDWCNAGWLSDGSVQYPITKPR Deamidation (N) 2677.2595 0.25948552 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 1 0 1 8 0 1 77.342 77.342 3 0.0068016 26766 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.648 34.372 20.387 0 0 0 17.82 29.339 19 0 0 0 18 28 1 0 0 0 1 1 4640.9 7433 3258 7160 17321 20027 20027 1114 1 GGLETSLR Unmodified 831.44503 0.4450311 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 9 4 1 1 41.837 41.837 2 0.0084655 12306 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.77 46.052 197.34 230.35 0 263.25 124.86 306.64 185 229 0 243 141 291 1 1 0 1 1 1 21272 7434 2077 7161 17322;17323 20028;20029 20029 2 GGLGLAGAK Unmodified 742.43374 0.43373813 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 9.83 1.77 2 1 1 1 1 49.536 49.536 2;3 0.00031395 13722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.19 40.983 757.51 584.58 911.49 647.11 871.72 615.25 713 611 905 652 882 591 5 6 7 6 7 4 227110 7435 3117 7162 17324;17325;17326;17327;17328;17329 20030;20031;20032;20033;20034;20035;20036 20031 7 GGLHTVAVMNVGAPAAGMNAAVR Unmodified 2163.1041 0.10411128 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 9 0 1 58.941 58.941 3 3.519E-10 17379 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.458 56.54 29.692 36.899 27.932 0 19.874 0 28 37 28 0 19 0 1 1 1 0 1 0 4149.8 7436 1568 7163 17330 20037 20037 1 GGLSDGEGPPGGR Unmodified 1154.5316 0.53161428 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 5.2 3.97 1 1 2 1 36.391 36.391 2 3.0884E-49 10333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 198.62 167.89 376.38 375.59 841.33 413.72 570.78 505.95 355 382 818 416 565 485 6 4 8 4 6 5 89747 7437 3216 7164 17331;17332;17333;17334;17335 20038;20039;20040;20041;20042;20043;20044;20045;20046 20041 9 GGNFGFGDSR Unmodified 1012.4363 0.43625733 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 48.01 48.01 2 3.9256E-07 13640 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.69 100.85 708.36 686.93 795.72 616.23 782.93 865.64 667 703 796 612 791 833 5 6 5 5 5 6 114460 7438 1271 7165 17336;17337;17338;17339 20047;20048;20049;20050;20051;20052 20049 6 GGNIGDGGGAADR Unmodified 1115.4956 0.49556312 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 4.29 3.61 2 3 1 1 29.539 29.539 2 1.0547E-20 7035 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 154.74 108.58 139.41 210.16 170.45 297.3 324.03 261.49 130 204 176 287 325 250 2 3 2 5 4 3 94249 7439 1875 7166 17340;17341;17342;17343;17344;17345;17346 20053;20054;20055;20056;20057;20058;20059 20055 7 GGNSGEMWIR Oxidation (M);Deamidation (N) 1122.4764 0.47640759 1809 P70343 Casp4 Caspase-4;Caspase-4 subunit p10;Caspase-4 subunit p20 yes yes 0 1 1 0 1 0 1 40.607 40.607 2 0.031789 11393 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.255 24.813 0 9.1002 28.462 28.908 0 29.848 0 9 28 28 0 28 0 1 1 1 0 1 2514.2 7440 1809 7167 17347 20060 20060 736 152 1 GGNTPPALGDLFAGGFPVLRPAGQR Unmodified 2464.2975 0.29752601 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 1 10.5 0.5 1 1 82.476 82.476 3 8.479E-05 25708 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.055 14.726 29.952 18.196 0 19 0 0 28 19 0 19 0 0 1 1 0 1 0 0 11502 7441 885 7168 17348;17349 20061;20062 20062 2 GGNVPQLDAPISQFSGLK Unmodified 1826.9527 0.95266246 2301 Q80TJ1 Cadps Calcium-dependent secretion activator 1 yes yes 0 0 0 0 13 0 1 75.328 75.328 3 5.8292E-08 28590 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.489 38.937 49.074 56.275 0 69.331 91.144 85.877 46 56 0 65 93 83 1 1 0 1 1 1 8447 7442 2301 7169 17350 20063 20063 1 GGNVPQLDAPISQFYADR Unmodified 1946.9486 0.94863972 365 A0A286YDH6 yes yes 0 0 0 0 6 0 1 72.486 72.486 3 0.00045731 26048 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.493 31.897 20.084 27.982 27.247 28.492 25.954 58.955 19 28 28 28 28 56 1 1 1 1 1 1 11251 7443 365 7170 17351 20064 20064 1 GGPAEECGPVNEHR Unmodified 1507.6474 0.64738909 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 1.5 0.5 1 1 29.726 29.726 3 6.4937E-36 6594 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 176.87 152.49 24.679 19.921 17.622 64.209 17.071 53.879 23 19 19 60 19 51 1 1 1 2 1 2 16428 7444 1903 7171 17352;17353 20065;20066 20065 2 GGPAEGQLQENDR Unmodified 1369.6222 0.6222202 640 B9EHJ3;P39447;A0A0U1RPW2;A0A0U1RPB2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 1.5 0.5 1 1 34.953 34.953 2 0.00045913 9405 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.611 50.581 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 2055.7 7445 640 7172 17354;17355 20067;20068 20068 2 GGPISFSSSR Unmodified 993.48796 0.48795855 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 8 0 1 45.995 45.995 2 0.042856 12050 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.968 24.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7446 1974 7173 17356 20069 20069 1 GGPLSDSYR Unmodified 950.44576 0.44575938 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 0 0 0 7 3.16 1 1 1 1 1 40.976 40.976 2 2.0565E-12 11633 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 176.75 131.03 530.27 586.06 676.03 524.68 347.36 542.28 498 590 681 509 352 518 3 4 4 3 2 4 174160 7447 1296 7174 17357;17358;17359;17360;17361 20070;20071;20072;20073;20074 20074 5 GGPNIITLADIVKDPVSR Unmodified 1864.0418 0.04181182 2083 Q60737 Csnk2a1 Casein kinase II subunit alpha yes yes 0 0 0 1 10 2.16 1 1 1 79.405 79.405 3 0.00026907 27781 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.989 38.914 119.68 102.8 102.21 37.751 147.15 222.86 112 102 102 37 148 213 2 2 2 1 2 2 26133 7448 2083 7175 17362;17363;17364 20075;20076;20077 20075 3 GGPPFAFVEFEDPRDAEDAVYGR Unmodified 2540.1608 0.16081734 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 1 4.67 0.471 1 2 80.881 80.881 3;4 0.0084274 30516 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.436 27.046 20.207 0 30.194 9 0 39.254 19 0 28 9 0 38 1 0 1 1 0 2 11383 7449 1130 7176 17365;17366;17367 20078;20079;20080 20080 3 GGPPGLR Unmodified 652.36566 0.36565857 195 G3UYZ1;A0A0R4J117;Q8R366;A0A0A6YWK7 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 7 0 1 34.177 34.177 2 0.027226 7131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.279 50.155 63.595 53.853 86.316 120.07 83.906 76.49 60 56 88 116 88 74 1 1 1 1 1 1 6074.1 7450 195 7177 17368 20081 20081 1 GGPPPER Unmodified 708.35549 0.35548781 2276 Q78PY7;Q3TJ56;E9Q3E9 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 3 0 1 22.591 22.591 2 0.024948 4043 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.21 56.681 48.948 0 68.959 25.237 66.831 0 46 0 65 28 65 0 1 0 1 1 1 0 2684.3 7451 2276 7178 17369 20082 20082 1 GGPSEVR Unmodified 700.3504 0.35040244 102 A0A0G2JGQ6;Q9JLM8;Q80VB6 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 3.5 0.5 1 1 24.085 24.085 2 0.013733 4320 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 115.46 59.368 48.793 59.809 44.303 72.974 105.75 143.02 46 60 46 71 109 137 1 1 1 2 2 2 16259 7452 102 7179 17370;17371 20083;20084 20084 2 GGPTEEELLK Unmodified 1071.5448 0.54480473 66 A0A0A6YX69 Kctd3 yes yes 0 0 0 0 3.5 0.5 1 1 49.955 49.955 3 0.0010781 16217 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.294 2.2274 29.759 57.797 154.84 37.583 46.111 118.08 28 56 148 37 46 112 1 1 2 1 1 2 7388 7453 66 7180 17372;17373 20085;20086 20086 2 GGPTPQEAIQR Unmodified 1152.5887 0.58873523 3091 Q9D8B3 Chmp4b Charged multivesicular body protein 4b yes yes 0 0 0 0 7.33 4.03 1 1 1 38.117 38.117 2 4.2962E-06 10746 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.35 65.575 149.25 34.238 134.31 82.924 75.224 107.92 140 37 130 84 74 102 3 1 2 2 2 2 14300 7454 3091 7181 17374;17375;17376 20087;20088;20089 20087 3 GGQDDDDAETGLTEGEGEGEEEKEPENLGK Unmodified 3133.2967 0.29671429 223 A0A0R4J2C2;P46097 Syt2 Synaptotagmin-2 yes no 0 0 0 1 1 0 1 54.743 54.743 4 1.5901E-31 17022 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.006 89.001 79.23 34.026 0 0 0 29.848 74 37 0 0 0 28 1 1 0 0 0 1 4117.3 7455 223 7182 17377 20090 20090 1 GGQDNIPVLK Unmodified 1039.5662 0.56620887 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7.88 3.1 2 2 1 1 2 55.593 55.593 2;3 1.8907E-05 18046 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.38 89.235 1514.4 944.41 1474.4 1253.6 1518.3 1726.2 1424 997 1470 1252 1561 1660 8 6 6 6 7 8 554670 7456 106 7183 17378;17379;17380;17381;17382;17383;17384;17385 20091;20092;20093;20094;20095;20096;20097;20098;20099 20093 9 GGQDNIPVLKR Unmodified 1195.6673 0.6673199 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 7.5 0.5 1 1 46.429 46.429 3 0.0030311 12853 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.82 46.508 68.992 53.576 139.12 173.29 50.279 136.08 65 56 139 167 56 129 1 1 2 2 1 2 16216 7457 106 7184 17386;17387 20100;20101 20100 2 GGQELGLK Unmodified 800.43922 0.43921744 224 A2RTH5;A0A0U1RNF2 Lcmt1 yes no 0 0 0 0 6 0 1 48.293 48.293 2 0.038359 14498 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.371 19.615 88.227 81.176 70.99 84.465 107.57 135.51 83 83 74 83 111 130 1 1 1 1 1 1 5451.8 7458 224 7185 17388 20102 20102 1 GGQEPAGAGSPSPPEDR Unmodified 1607.7176 0.71757715 1018 F7BJK1 Pcdh1 yes yes 0 0 0 0 1 0 1 33.9 33.9 3 0.045583 8493 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 31.111 22.382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1899.4 7459 1018 7186 17389 20103 20103 1 GGQIDAK Unmodified 687.35515 0.35515346 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5 0 1 35.808 35.808 2 0.06242 9095 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.248 15.967 78.646 92.839 48.424 139.2 0 0 74 93 56 130 0 0 1 1 1 1 0 0 7226.9 7460 3449;3451;3452 7187 17390 20104 20104 1 GGQLQEQLTQQLSQALSSAVAGR Unmodified 2369.2299 0.22989995 1100 G5E896;Q3UJB9;D6RE33;A0A0R4J1Q0 Edc4 Enhancer of mRNA-decapping protein 4 yes no 0 0 0 0 10 0 1 91.492 91.492 3 0.0047251 29799 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.485 20.893 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3202.4 7461 1100 7188 17391 20105 20105 1 GGQQLVFNFYSFK Unmodified 1533.7616 0.76161421 3450;8 A0A087WNU5;S4R162;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5 Ank3 Ankyrin-3 no no 0 0 0 0 10.5 0.5 1 1 82.268 82.268 3 8.8561E-05 25664 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.858 57.972 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 0 8967 7462 8;3450 7189 17392;17393 20106;20107 20107 2 GGQTIVQLQK Unmodified 1070.6084 0.60840804 332 A0A1W2P872;D3YVV7;Q9JKN6 Nova2;Nova1 RNA-binding protein Nova-1 yes no 0 0 0 0 7 0 1 53.063 53.063 3 0.00012106 15952 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.17 26.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7463 332 7190 17394 20108 20108 1 GGQVIQIPVADITVGDIAQVK Unmodified 2120.1841 0.18411896 1096 G5E829;A0A1W2P7C7 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 86.548 86.548 3 2.5402E-19 32459 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.772 73.078 0 0 28.153 98.593 73.281 68.546 0 0 28 93 74 65 0 0 1 3 2 2 25468 7464 1096 7191 17395;17396;17397;17398 20109;20110;20111;20112 20109 4 GGQVQIVTK Unmodified 928.53418 0.53418046 1424 P20357;Q80X35;Q80ZL4;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 46.926 46.926 2;3 0.00019889 12478 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.3 65.426 93.668 96.13 319.09 151.56 381.93 299.19 88 97 305 148 380 287 2 2 3 1 3 3 36950 7465 1424 7192 17399;17400;17401;17402;17403 20113;20114;20115;20116;20117 20115 5 GGQYFNDK Unmodified 927.40865 0.4086456 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 6 0.816 1 1 1 45.666 45.666 2 0.010143 13281 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.392 62.197 250.9 268.12 230.83 295.99 400.53 368.07 236 269 235 289 408 356 2 2 1 2 3 3 40459 7466 3216 7193 17404;17405;17406 20118;20119;20120 20119 3 GGSAAATSNPHHDNVR Unmodified 1589.7295 0.72947924 804 E0CYB9;Q6PCP5;F7CTF8 Mff Mitochondrial fission factor yes no 0 0 0 0 3.5 0.5 1 1 19.026 19.026 4 6.7329E-13 2834 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 124.81 112.18 0 9 8.8519 19.892 18.466 14.397 0 9 9 19 19 14 0 1 1 1 1 1 3808.1 7467 804 7194 17407;17408 20121;20122 20121 2 GGSAPEGAAYAAPR Unmodified 1273.6051 0.60511357 636 B7ZNF6;E9QKH8;O35927 Ctnnd2 Catenin delta-2 yes no 0 0 0 0 4 0 1 37.604 37.604 2 0.0043148 10438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.166 46.028 20.387 0 0 20.767 0 20.254 19 0 0 19 0 19 1 0 0 1 0 1 3342.5 7468 636 7195 17409 20123 20123 1 GGSDGYGSGR Unmodified 911.37332 0.37332272 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 5.17 3.62 1 1 2 1 1 23.307 23.307 2 2.1662E-11 4241 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 165.15 69.125 286.08 336.11 454.44 318.9 137.59 402.37 270 345 449 312 135 380 3 5 5 3 2 4 118210 7469 1271 7196 17410;17411;17412;17413;17414;17415 20124;20125;20126;20127;20128;20129 20125 6 GGSDNDASLVITDLTLEDYGR Unmodified 2210.0339 0.033885488 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 4 0.816 1 1 1 81.901 81.901 3 6.0143E-23 30804 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 129.75 111.36 20.195 94.582 0 11.327 12.261 0 19 93 0 11 12 0 1 3 0 2 1 0 33246 7470 3258 7197 17416;17417;17418 20130;20131;20132;20133;20134 20132 5 GGSDNDASLVITDLTLEDYGR Deamidation (N) 2211.0179 0.017901073 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 1 0 0 3 0 1 85.273 85.273 3 5.6461E-17 31253 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.26 117.07 0 6.2818 6.1151 0 6.0623 6.223 0 6 6 0 6 6 0 1 1 0 1 1 1617.8 7471 3258 7197 17419 20135 20135 1115 1 GGSFGGR Unmodified 636.29797 0.29797293 486;626 B2RXM2;J3QNY1;A2AL13;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 6 0 1 27.491 27.491 2 0.013249 4992 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.11 12.417 108.37 112.55 85.892 94.033 132.76 150.78 102 114 90 93 136 145 1 1 1 1 1 1 38936 7472 626;486 7198 17420 20136 20136 1 GGSFLTGK Unmodified 765.4021 0.40210366 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 9.5 0.5 1 1 52.416 52.416 2 0.037463 14212 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.735 20.886 117.94 108.42 171.05 57.168 129.66 183.92 111 111 167 56 130 176 1 1 2 1 1 1 19865 7473 2790 7199 17421;17422 20137;20138 20137 2 GGSGFLK Unmodified 664.35443 0.35442518 2500 Q8C547 Heatr5b HEAT repeat-containing protein 5B yes yes 0 0 0 0 9 0 1 50.496 50.496 2 0.014282 13354 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.113 43.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7474 2500 7200 17423 20139 20139 1 GGSGGSYGGGGSGGGYGGGSGSR Unmodified 1790.7204 0.72043069 661 CON__P35527 yes yes 0 0 0 0 13 0 1 29.683 29.683 3 2.1058E-06 6519 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.235 17.17 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1665.5 + 7475 661 7201 17424 20140 20140 1 GGSGGSYGR Unmodified 796.34638 0.34637969 661 CON__P35527 yes yes 0 0 0 0 9.5 3.5 1 1 20.76 20.76 2 0.0094423 3051 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.1 37.281 9.5959 32.249 5.2844 0 6.276 0 9 31 6 0 6 0 1 2 1 0 1 0 1820.9 + 7476 661 7202 17425;17426 20141;20142 20142 2 GGSQGEAVGELPR Unmodified 1255.6157 0.61567826 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 6.67 4.57 1 1 1 1 2 41.98 41.98 2;3 5.0591E-21 12164 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 158.34 118.4 466.57 266.12 409.47 445.04 592.82 331.67 437 269 408 437 589 315 8 4 6 8 6 5 385730 7477 1390 7203 17427;17428;17429;17430;17431;17432 20143;20144;20145;20146;20147;20148;20149;20150;20151 20151 9 GGTLTQYEGK Unmodified 1052.5138 0.51383895 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 6 0 1 47.522 47.522 3 0.00013338 14151 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.862 57.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7478 2783 7204 17433 20152 20152 1 GGTPAGSTR Unmodified 802.39333 0.39332988 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 5 0.816 1 1 1 19.688 19.688 2 0.00043201 2800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.98 51.464 48.739 105.83 92.193 114.11 128.45 58.105 46 104 96 111 126 55 2 3 3 2 2 2 10027 7479 836 7205 17434;17435;17436 20153;20154;20155 20153 3 GGTPSAFDR Unmodified 906.41954 0.41954463 1568;2507;1357 P47857;P12382;Q8C605;Q9WUA3 Pfkm;Pfkl;Pfkp ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 0 7.33 4.03 1 1 1 37.399 37.399 2 3.5193E-07 9927 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.98 56.805 141.64 0 0 214.2 175.98 345.69 132 0 0 199 189 329 1 0 0 1 1 1 39974 7480 1568;1357;2507 7206 17437;17438;17439 20156;20157;20158 20158 3 GGTWFAGFGR Unmodified 1054.4985 0.49846366 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 11 0 1 67.78 67.78 2 0.0042527 19044 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.042 50.345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7481 680 7207 17440 20159 20159 1 GGVGAPGSPSTPPTR Unmodified 1336.6735 0.67352749 2015 Q3UYC0 Ppm1h Protein phosphatase 1H yes yes 0 0 0 0 6 0 1 37.523 37.523 2 0.00011017 9497 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.632 50.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7482 2015 7208 17441 20160 20160 1 GGVIAGSPAPPELIR Unmodified 1432.8038 0.80381338 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 62.193 62.193 3 0.0011289 22000 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.038 29.434 29.904 27.776 0 71.045 0 0 28 28 0 65 0 0 1 1 0 1 0 0 4628.4 7483 2688 7209 17442;17443 20161;20162 20162 2 GGVVGIK Unmodified 628.39081 0.39081069 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 9.33 1.89 1 1 2 1 1 47.278 47.278 2;3 0.0053222 12606 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.26 51.717 4038.6 3752.6 5970.8 4109.2 5446.9 6031.6 3811 3868 5902 4115 5543 5804 4 5 5 5 3 6 883660 7484 1309 7210 17444;17445;17446;17447;17448;17449 20163;20164;20165;20166;20167;20168 20164 6 GGWGISPR Unmodified 828.42424 0.42423608 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 8.5 0.5 1 1 48.312 48.312 2 0.0067012 13123 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.67 44.831 836.36 629.54 466.32 336.63 971.39 351.53 785 652 459 340 955 340 2 2 1 1 2 1 62911 7485 1731;1787 7211 17450;17451 20169;20170 20169 2 GGYFDEFGIIR Unmodified 1272.6139 0.61388734 1869 Q00612;A3KG36;G3UWD6;P97324 G6pdx;G6pd2 Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase;Glucose-6-phosphate 1-dehydrogenase 2 yes no 0 0 0 0 6 0 1 75.785 75.785 2 0.0047891 27520 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.507 35.287 49.128 45.631 0 50.278 0 59.696 46 46 0 46 0 56 1 1 0 1 0 1 4636.7 7486 1869 7212 17452 20171 20171 1 GGYIGSTYFER Unmodified 1248.5775 0.57750184 1686 P61082;F7CDT0;F6WMC0;G5E919 Ube2m NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 0 7 0 1 57.16 57.16 2 0.0037506 17896 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.915 50.128 0 0 47.215 57.404 52.623 96.57 0 0 46 56 56 92 0 0 1 1 1 1 6177.2 7487 1686 7213 17453 20172 20172 1 GGYVLHIGTIYGNLK Unmodified 1603.8722 0.8722273 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11 0 1 68.061 68.061 3 1.9034E-05 19229 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.262 54.389 0 97.792 69.419 107.35 0 118.33 0 93 74 102 0 111 0 1 1 1 0 1 16001 7488 2382 7214 17454 20173 20173 1 GHAAPILYAVWAEAGFLPEAELLNLR Unmodified 2820.4963 0.4962854 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 11.5 1.5 1 1 103.62 103.62 4 0.037392 33453 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 26.239 11.779 0 0 40.243 19.594 28.291 68.483 0 0 38 19 28 65 0 0 2 1 1 2 3098.5 7489 1537 7215 17455;17456 20174;20175;20176 20174 3 GHAEDYNR Unmodified 960.40496 0.4049572 2416 Q8BJ64 Chdh Choline dehydrogenase, mitochondrial yes yes 0 0 0 0 2 0 1 18.859 18.859 3 0.0067844 2943 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.905 43.681 0 0 0 9.6131 11.902 6.0564 0 0 0 9 12 6 0 0 0 1 1 1 394.39 7490 2416 7216 17457 20177 20177 1 GHAVNLLDVPVPVAR Unmodified 1555.8835 0.88346068 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 9.67 2.49 1 1 1 63.493 63.493 3 5.5866E-05 21009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.272 51.03 198.5 89.454 104.63 67.634 0 59.696 186 93 102 65 0 56 3 2 2 1 0 1 45357 7491 815;2590 7217 17458;17459;17460 20178;20179;20180 20178 3 GHEEFPVDGR Unmodified 1141.5152 0.51523593 710 D3YWX2;F6YTL8 Ylpm1 yes no 0 0 0 0 3 0 1 36.226 36.226 3 0.0079509 10343 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.259 37.048 0 29.165 37.482 17.998 28.461 0 0 28 37 19 28 0 0 1 1 1 1 0 3134.3 7492 710 7218 17461 20181 20181 1 GHEFSIPFVEMK Unmodified 1419.6857 0.68567208 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.5 0.5 1 1 70.739 70.739 3 0.00018171 23610 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.692 47.864 99.236 27.124 70.029 70.201 158.4 75.645 93 28 65 65 157 74 2 1 1 1 2 1 20322 7493 2479 7219 17462;17463 20182;20183 20183 2 GHEYTNIK Unmodified 960.46649 0.46649483 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 6 0 1 35.611 35.611 3 0.0090324 8632 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.246 43.74 78.707 62.789 63.661 56.233 62.759 77.093 74 65 65 56 65 74 1 1 1 1 1 1 2467.2 7494 1512 7220 17464 20184 20184 1 GHFDEAR Unmodified 830.36712 0.36711513 341 A0A1Y7VL44;E9Q6P5;A0A1Y7VLT4 Ttc7b yes no 0 0 0 0 4 0 1 24.757 24.757 3 0.039815 4527 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.636 34.601 9.657 0 0 0 29.288 0 9 0 0 0 28 0 1 0 0 0 1 0 3493.5 7495 341 7221 17465 20185 20185 1 GHIASVLNAWPEDVVK Unmodified 1733.9101 0.91006937 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 7 0 1 70.907 70.907 3 0.00058535 24274 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.755 33.541 39.303 36.112 36.229 32.325 26.145 48.29 37 37 37 32 28 46 1 1 1 1 1 1 3938.4 7496 1317 7222 17466 20186 20186 1 GHIAVSAAVFPTGTK Unmodified 1454.7882 0.78816332 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 11 0 1 55.281 55.281 3 0.00066024 13662 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.709 40.465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7497 1967 7223 17467 20187 20187 1 GHILVDEFQNTNVK Unmodified 1612.8209 0.82092001 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 6 0 1 58.032 58.032 3 1.1226E-20 19158 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.54 105.7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7498 1566 7224 17468 20188 20188 1 GHLDNISNNLLIGAINIENGK Deamidation (N) 2219.1546 0.15460975 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 1 0 0 6.33 0.471 2 1 76.906 76.906 3;4 9.2979E-17 28072 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.09 96.798 286.13 327 273.4 367.07 313.17 314.32 269 325 279 352 315 298 5 6 6 7 5 4 38960 7499 2843 7225 17469;17470;17471 20189;20190;20191;20192;20193;20194;20195;20196 20192 1008 8 GHLDNISNNLLIGAINIENGK Unmodified 2218.1706 0.17059416 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 8 0 2 77.666 77.666 3 5.0436E-11 26952 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.357 72.525 29.691 0 59.273 26.239 44.245 77.621 28 0 56 28 46 74 1 0 1 1 1 1 4162.5 7500 2843 7225 17472;17473 20197;20198 20197 2 GHLENNPALEK Unmodified 1220.6149 0.61494998 1381 P14869;D3YVM5;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 6 0 1 41.255 41.255 3 0.0011171 11246 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.408 38.876 108.49 189.52 0 0 0 231.32 102 185 0 0 0 217 1 1 0 0 0 1 14443 7501 1381 7226 17474 20199 20199 1 GHLETPIWIER Unmodified 1349.7092 0.70918471 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 6 0 1 57.519 57.519 3 0.0011821 18892 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.64 34.09 39.25 35.963 45.342 46.571 53.393 58.172 37 37 46 46 55 56 1 1 1 1 1 1 6408.4 7502 2408 7227 17475 20200 20200 1 GHLQGYR Unmodified 829.41949 0.41948505 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 9.5 3.5 1 1 25.812 25.812 3 0.022417 4553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.842 46.639 98.338 108.94 151.5 36.044 65.675 67.416 93 111 148 37 65 65 2 2 2 1 1 1 11571 7503 331 7228 17476;17477 20201;20202 20202 2 GHPDLQGQPADDIFESIGDR Unmodified 2165.9978 0.99777475 3021 Q9D0F3 Lman1 Protein ERGIC-53 yes yes 0 0 0 0 3.5 0.5 1 1 65.27 65.27 3 0.0020887 23702 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.309 22.915 0 0 0 48.436 17.598 38.94 0 0 0 47 19 37 0 0 0 2 1 1 3056.9 7504 3021 7229 17478;17479 20203;20204 20203 2 GHPEFSTNR Unmodified 1043.4785 0.4784565 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 5 1 1 1 28.185 28.185 3 0.00023172 6083 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.1 64.833 38.989 131.17 55.885 0 64.649 97.293 37 130 56 0 65 93 1 2 1 0 1 1 11735 7505 1641 7230 17480;17481 20205;20206 20205 2 GHQDVEAAQAEYVEK Unmodified 1672.7693 0.76927837 2873 Q99MN9;E9Q1J7 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 2.5 0.5 1 1 44.77 44.77 3 2.5772E-05 14172 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.656 62.078 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 7642.7 7506 2873 7231 17482;17483 20207;20208 20208 2 GHQLLSADVDIK Unmodified 1294.6881 0.68811492 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 6.71 1.03 1 2 2 2 54.277 54.277 3;4 3.2753E-13 17378 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.03 96.706 423.32 509.41 348.96 590.36 530.64 550.08 398 510 352 565 537 528 6 7 6 7 7 7 118500 7507 1554 7232 17484;17485;17486;17487;17488;17489;17490 20209;20210;20211;20212;20213;20214;20215;20216 20210 8 GHSVEHALR Unmodified 1004.5152 0.51517635 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 5.5 0.5 1 1 25.267 25.267 3 0.001739 4475 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.827 62.153 20.292 48.64 0 39.925 27.454 29.848 19 47 0 37 28 28 1 2 0 1 1 1 3544.8 7508 2585 7233 17491;17492 20217;20218 20217 2 GHTDSVQDISFDHSGK Unmodified 1728.7703 0.770341 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 5 0 1 43.469 43.469 4 0.00062101 12764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.169 35.888 0 37.953 84.641 64.821 62.694 67.501 0 37 83 65 65 65 0 1 1 1 1 1 5581.6 7509 1760 7234 17493 20219 20219 1 GHTGIGELAAALNEFDNK Unmodified 1855.9064 0.90644055 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 6.5 0.5 1 1 77.608 77.608 3 5.2239E-05 27480 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.525 40.684 0 58.791 47.458 51.371 29.288 0 0 56 46 47 28 0 0 2 1 1 1 0 8446 7510 799 7235 17494;17495 20220;20221 20221 2 GHVDPGENDLETALR Unmodified 1621.7696 0.76961272 1636 P56380 Nudt2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 0 2.5 0.5 1 1 49.742 49.742 3 1.4089E-16 16160 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 101.72 78.255 20.292 18.848 0 0 0 59.696 19 19 0 0 0 56 1 1 0 0 0 1 13826 7511 1636 7236 17496;17497 20222;20223 20222 2 GHVDVLAPTVQELAALEK Unmodified 1889.0258 0.025827405 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 5.5 0.5 1 1 76.305 76.305 3;4 9.1672E-05 28410 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.173 39.077 20.149 19.744 68.194 19.083 0 0 19 19 65 19 0 0 1 1 2 1 0 0 6153 7512 2744 7237 17498;17499 20224;20225 20224 2 GHVLLHR Unmodified 830.48751 0.48750504 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 10 2.16 1 1 1 26.07 26.07 3 0.0068717 3901 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.263 60.716 73.665 73.769 138.16 56.137 183.82 85.173 69 74 130 56 181 83 2 2 2 1 3 2 17358 7513 2980 7238 17500;17501;17502 20226;20227;20228;20229 20226 4 GHWFLSPR Unmodified 998.50863 0.50863441 2582;2386 Q8BGT8;F7D3N3;F6U6Z2;Q8K0S0;E0CXJ1 Phyhipl;Phyhip Phytanoyl-CoA hydroxylase-interacting protein-like;Phytanoyl-CoA hydroxylase-interacting protein no no 0 0 0 0 11.5 1.12 1 1 1 1 51.115 51.115 3 0.0022554 12000 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.195 60.875 159.53 85.286 61.223 295.02 147.34 47.775 149 83 65 286 148 46 3 2 2 5 3 1 186010 7514 2386;2582 7239 17503;17504;17505;17506 20230;20231;20232;20233;20234 20231 5 GHYTEGAELVDAVLDVVR Unmodified 1941.9796 0.97960549 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 0 0 7.29 2.55 2 1 2 1 1 85.685 85.685 3;4 2.4234E-46 32090 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.64 136.33 155.91 110.02 94.657 147.72 175.97 133.6 146 109 94 139 177 129 7 6 5 5 8 7 57635 7515 3072 7240 17507;17508;17509;17510;17511;17512;17513 20235;20236;20237;20238;20239;20240;20241;20242;20243;20244 20239 10 GHYTEGAELVDSVLDVVR Unmodified 1957.9745 0.97452012 1795;2283;1863;2975;3183;2805 P99024;G3UZR1;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-3 chain no no 0 0 0 0 6.91 3.09 2 3 2 1 1 2 80.186 80.186 2;3;4 1.094E-64 30303 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 188.85 170.03 677.66 785.47 840.95 515.93 588.07 661.64 639 793 828 509 586 631 16 19 15 11 12 13 454020 7516 1863;1795;2283;2805;2975;3183 7241 17514;17515;17516;17517;17518;17519;17520;17521;17522;17523;17524 20245;20246;20247;20248;20249;20250;20251;20252;20253;20254;20255;20256;20257;20258;20259;20260;20261;20262;20263;20264;20265;20266;20267 20251 23 GHYTIGK Unmodified 774.40244 0.40243801 1313;1794;44 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;P05213;A0A2R8VHF3;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 8.45 3.14 1 1 2 1 2 1 1 1 1 36.809 36.809 2;3 0.0042093 7690 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.39 46.185 2220.1 2717.2 2961.7 2256.2 3098.6 2718.9 2089 2741 2968 2246 3126 2616 7 15 13 10 11 11 1219000 7517 44;1313;1794 7242 17525;17526;17527;17528;17529;17530;17531;17532;17533;17534;17535 20268;20269;20270;20271;20272;20273;20274;20275;20276;20277;20278;20279;20280;20281;20282 20272 15 GIAFAFNAK Unmodified 937.50215 0.50215205 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 0 11 0 1 67.471 67.471 3 0.0034582 18907 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.169 38.995 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 4538.6 7518 383 7243 17536 20283 20283 1 GIAFEDVR Unmodified 905.46068 0.46068117 1551 P45952 Acadm Medium-chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 5 0 1 53.98 53.98 2 0.017719 17835 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.597 32.53 29.754 57.578 0 0 0 78.884 28 56 0 0 0 74 1 1 0 0 0 1 4751.1 7519 1551 7244 17537 20284 20284 1 GIAGLGDVAEVR Unmodified 1155.6248 0.62478638 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 7.75 3.11 1 1 1 1 61.127 61.127 2;3 2.3225E-13 19883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.78 85.712 178.91 55.551 0 129.16 172.22 173.11 167 56 0 120 176 167 2 1 0 1 2 2 34172 7520 2555 7245 17538;17539;17540;17541 20285;20286;20287;20288 20287 4 GIALWGGDK Unmodified 915.48142 0.48141661 2569 Q8JZQ9 Eif3b Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 0 9 0 1 65.889 65.889 2 0.0023231 20705 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.64 44.084 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7521 2569 7246 17542 20289 20289 1 GIAQMLEK Unmodified 888.47389 0.47388839 1789 P67871;G3UZA4;G3UZJ5;G3UZX4;G3UXG7 Csnk2b Casein kinase II subunit beta yes no 0 0 0 0 10 2.16 1 1 1 64.097 64.097 2;3 0.0048732 20540 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.38 20.971 148.34 118.15 35.647 177.86 135.23 58.158 139 121 37 167 139 56 2 2 1 2 2 1 14896 7522 1789 7247 17543;17544;17545 20290;20291;20292 20290 3 GIASFQCLPALGLWNPR Unmodified 1898.9825 0.9825228 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 11.5 0.5 1 1 89.672 89.672 3 1.9816E-12 25536 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.45 105.7 0 29.792 0 0 0 39.442 0 28 0 0 0 37 0 1 0 0 0 1 17728 7523 1127 7248 17546;17547 20293;20294 20294 2 GIAWWTDK Unmodified 975.48142 0.48141661 2713 Q8VEK0;D3YVV1 Tmem30a Cell cycle control protein 50A yes no 0 0 0 0 10.7 1.7 1 1 1 71.496 71.496 2 0.0001486 21250 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.62 59.419 99.789 0 0 127.99 168.8 0 93 0 0 120 167 0 1 0 0 1 1 0 12005 7524 2713 7249 17548;17549;17550 20295;20296;20297 20296 3 GIAYIEFK Unmodified 939.50657 0.50656873 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 8.5 0.5 1 1 69.294 69.294 2 0.0012388 23005 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.9 94.448 187.04 172 158.67 216.71 459.7 0 176 176 158 213 449 0 2 2 1 2 3 0 25516 7525 1333 7250 17551;17552 20298;20299;20300 20299 3 GICNLLNTYHVPELIK Unmodified 1882.9975 0.99750416 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10 0 1 79.691 79.691 3 0.00089104 24888 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.888 33.475 0 68.743 24.921 28.072 55.657 47.448 0 65 28 28 56 46 0 1 1 1 1 1 2892.8 7526 2235 7251 17553 20301 20301 1 GIDEGPDGLK Unmodified 999.48729 0.48728985 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 6.25 3.96 1 1 1 1 51.978 51.978 2 5.4119E-05 17280 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.65 51.852 355.37 270.39 276.75 305.48 370.41 318.82 334 281 285 299 378 309 3 3 3 2 3 3 32157 7527 1994 7252 17554;17555;17556;17557 20302;20303;20304;20305 20303 4 GIDIHGVPYVINVTLPDEK Unmodified 2078.1048 0.10480601 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 7 0 1 78.909 78.909 3 9.8514E-08 28139 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.281 80.24 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 4707.7 7528 2744 7253 17558 20306 20306 1 GIDLTQVK Unmodified 872.49673 0.49673232 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 59.346 59.346 2;3 0.00065979 18347 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.4 66.155 273.92 659.12 774.42 545.11 583.73 974.72 258 649 776 551 614 930 1 3 3 3 3 3 83857 7529 2433 7254 17559;17560;17561;17562 20307;20308;20309;20310 20308 4 GIDPFSLDALAK Unmodified 1245.6605 0.66050319 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 9.25 2.28 1 1 1 1 83.341 83.341 3 1.9171E-06 32379 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.91 49.134 108.93 55.551 39.786 122.42 0 217.46 102 56 37 112 0 204 2 1 1 2 0 3 38749 7530 1826 7255 17563;17564;17565;17566 20311;20312;20313;20314 20314 4 GIDQCIPLFVEAALER Unmodified 1829.9346 0.93456956 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 6 0 1 93.254 93.254 3 0.011865 35292 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.349 17.114 20.387 0 0 30.604 0 29.848 19 0 0 28 0 28 1 0 0 1 0 1 1594.4 7531 3164 7256 17567 20315 20315 1 GIDYEIVPINLIK Unmodified 1485.8443 0.84428121 338 Q9WVL0;A0A1Y7VJZ2 Gstz1 Maleylacetoacetate isomerase yes no 0 0 0 0 8 0 1 87.784 87.784 3 0.00013044 31711 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.848 43.41 0 0 0 49.96 16.9 19.772 0 0 0 46 19 19 0 0 0 1 1 1 1939.2 7532 338 7257 17568 20316 20316 1 GIEAVGGK Unmodified 729.4021 0.40210366 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 0 6.67 1.25 1 1 1 45.39 45.39 2 0.01221 13819 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.308 36.252 364.78 256.1 330.3 311.64 166.43 360.89 343 269 334 306 176 343 3 3 3 3 2 3 58034 7533 3117 7258 17569;17570;17571 20317;20318;20319 20317 3 GIEDEQDLVTLEVTGVVFHYR Unmodified 2418.2067 0.2067049 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 8.5 4.5 1 1 87.399 87.399 3 3.7458E-07 33246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.184 54.689 0 37.576 4.985 14.734 14.405 9.594 0 37 5 14 14 9 0 2 1 2 1 1 5744.7 7534 144 7259 17572;17573 20320;20321;20322 20320 3 GIEELFLDLCK Unmodified 1335.6744 0.67443869 1516 P35282 Rab21 Ras-related protein Rab-21 yes yes 0 0 0 0 7 0 1 92.017 92.017 3 0.00021865 34071 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.681 61.06 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1187.9 7535 1516 7260 17574 20323 20323 1 GIEEVGIYR Unmodified 1034.5397 0.53965977 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 5 0 1 54.584 54.584 2 0.033935 18089 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.35 5.7954 0 29.792 0 61.208 0 0 0 28 0 56 0 0 0 1 0 1 0 0 5822.9 7536 816 7261 17575 20324 20324 1 GIEFPMADLDALSPIHTPQR Unmodified 2207.1045 0.10448843 2058 Q5SRX1;Q5SXA5 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 6 0 1 83.387 83.387 3 0.006911 31061 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.453 15.651 0 9.4292 8.7805 8.7954 27.556 38.656 0 9 9 9 28 37 0 1 1 1 1 1 1449.5 7537 2058 7262 17576 20325 20325 1 GIEIPEVR Unmodified 911.50763 0.50763136 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 7.33 4.03 1 1 1 58.269 58.269 2 0.0064022 20012 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.01 53.571 127.97 233.33 368.12 418.93 269.68 562.61 120 223 371 408 278 535 1 2 3 3 2 3 80403 7538 1164 7263 17577;17578;17579 20326;20327;20328;20329 20327 4 GIEQAVQSHAVAEEEAR Unmodified 1822.881 0.88095408 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 5.5 4.39 1 1 1 1 47.27 47.27 3 2.2018E-45 14484 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.97 123.64 88.223 46.934 47.954 36.36 103.73 37.586 84 46 46 37 102 37 3 1 1 1 2 1 54249 7539 2517 7264 17580;17581;17582;17583 20330;20331;20332;20333;20334 20334 5 GIETDGSNLSGVSAK Deamidation (N) 1434.6838 0.6838174 206 A0A0R4J1M0;D3Z7B6;Q9Z0P7 Sufu Suppressor of fused homolog yes no 0 1 0 0 4 0 1 52.37 52.37 3 0.0084489 17371 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.482 18.296 0 0 0 101.65 0 99.138 0 0 0 93 0 93 0 0 0 1 0 1 19997 7540 206 7265 17584 20335 20335 71 1 GIEYLHYQK Unmodified 1149.5819 0.58185893 2484 Q8C078;A0A0G2JET2 Camkk2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 0 0 0 0 8 0 1 51.556 51.556 3 0.0022067 14616 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.954 33.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7541 2484 7266 17585 20336 20336 1 GIFASGSPFK Unmodified 1009.5233 0.52328142 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 11 0.816 1 1 1 67.61 67.61 2;3 3.4204E-05 18842 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.28 73.777 163.08 0 183.22 46.23 27.265 137.8 153 0 172 46 28 130 2 0 2 1 1 2 43070 7542 2432 7267 17586;17587;17588 20337;20338;20339 20338 3 GIFEALRPLETLPVEGLIR Unmodified 2122.215 0.21502516 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 10 0.707 1 2 1 94.241 94.241 3 3.6669E-07 33649 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.453 61.276 39.397 26.659 28.498 0 38.41 38.346 37 28 28 0 37 37 1 1 1 0 1 2 18398 7543 3204 7268 17589;17590;17591;17592 20340;20341;20342;20343;20344 20340 5 GIFFSHR Unmodified 862.44497 0.44497152 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 11.5 0.5 1 1 46.152 46.152 3 0.0025989 9979 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.11 86.542 29.464 94.774 131.08 83.999 0 59.696 28 93 130 84 0 56 1 2 2 2 0 1 23503 7544 1506 7269 17593;17594 20345;20346 20345 2 GIFLAIGPDFK Unmodified 1176.6543 0.6542956 2380 Q8BGN3 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes yes 0 0 0 0 10.5 0.5 1 1 84.914 84.914 2;3 0.0008222 26671 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.893 42.22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2708.1 7545 2380 7270 17595;17596 20347;20348 20348 2 GIFNGFSITLK Deamidation (N) 1196.6441 0.64412484 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 1 0 0 10 0.816 1 1 1 85.916 85.916 2;3 2.0599E-05 27499 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.93 64.737 0 86.831 88.615 69.864 62.792 104.5 0 83 84 65 65 102 0 2 1 1 1 3 20244 7546 2715 7271 17597;17598;17599 20349;20350;20351 20350 977 3 GIFPVLCK Unmodified 932.51536 0.51535927 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 7.75 5.31 3 1 1 1 2 72.882 72.882 2;3 0.0012226 18663 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.99 61.755 4153.5 5689.3 1675.8 2834.7 9705.7 8149.8 3889 5500 1644 2746 9669 7880 10 8 7 8 11 11 1949100 7547 1609 7272 17600;17601;17602;17603;17604;17605;17606;17607 20352;20353;20354;20355;20356;20357;20358;20359;20360;20361;20362;20363 20360 12 GIFVQSVMPYLVATK Unmodified 1651.9008 0.90075023 1260 O70503 Hsd17b12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 0 0 0 0 4.67 5.19 2 1 91.719 91.719 3 3.6443E-05 25779 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.344 53.643 29.814 50.216 58.261 54.192 14.059 47.569 28 50 59 53 14 45 2 4 4 4 1 3 6630.6 7548 1260 7273 17608;17609;17610 20364;20365;20366;20367;20368 20368 5 GIGFAITR Unmodified 833.47594 0.4759373 1582;2604 P48758;A0A338P684;Q8K354;A0A338P797 Cbr1;Cbr3 Carbonyl reductase [NADPH] 1;Carbonyl reductase [NADPH] 3 no no 0 0 0 0 10.8 1.48 1 1 1 1 57.238 57.238 2 0.015567 14492 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.377 24.772 604.68 1121.8 1536.2 1296.9 813.62 1542.7 570 1115 1547 1278 828 1469 2 3 4 3 2 3 135470 7549 1582;2604 7274 17611;17612;17613;17614 20369;20370;20371;20372 20371 4 GIGLPVAVQCVALPWQEELCLR Unmodified 2507.3029 0.30287066 1168 O08914 Faah Fatty-acid amide hydrolase 1 yes yes 0 0 0 0 9 0 1 96.194 96.194 3 0.019246 34440 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 29.807 18.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7550 1168 7275 17615 20373 20373 1 GIGPTTK Unmodified 672.38064 0.38063993 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8 0.816 1 1 1 40.553 40.553 2 0.026973 10208 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 35.025 874.77 669.83 829.04 766.86 823.99 900.71 823 698 839 761 851 867 3 3 3 3 3 3 91853 7551 2479 7276 17616;17617;17618 20374;20375;20376 20374 3 GIGPVYSSK Unmodified 906.48108 0.48108226 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 9 0 1 49.932 49.932 2 0.0044782 13096 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.67 45.641 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 3519.4 7552 1558 7277 17619 20377 20377 1 GIGTDEATIIDIVTHR Unmodified 1709.8948 0.89481323 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 8 3.56 1 1 1 77.035 77.035 3 3.5883E-59 28195 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 196.37 162.19 157.82 130.1 54.373 88.437 120.87 107.15 148 130 56 84 121 102 4 3 2 3 3 2 36098 7553 1050;1380 7278 17620;17621;17622 20378;20379;20380;20381 20380 4 GIGTDSAEFAELK Unmodified 1336.6511 0.65106071 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 5 0 1 66.201 66.201 3 0.00016267 23583 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.54 48.782 48.96 35.451 36.833 18.572 0 59.696 46 37 37 19 0 56 1 1 1 1 0 1 4382 7554 761 7279 17623 20382 20382 1 GIHDADSEAR Unmodified 1069.4789 0.47885043 12 Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0 Clasp1 CLIP-associating protein 1 yes no 0 0 0 0 2 0 1 24.84 24.84 3 0.0032153 4888 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 38.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7555 12 7280 17624 20383 20383 1 GIHDSFVTK Unmodified 1002.5134 0.51344502 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 45.633 45.633 3 0.0021817 12684 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.985 42.911 157.72 59.584 182.99 149.31 82.137 303.6 148 56 176 148 83 287 2 1 2 2 1 3 31471 7556 2469 7281 17625;17626 20384;20385;20386 20385 3 GIHVEIPGAQAESLGPLQVAR Unmodified 2141.1593 0.15930119 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 7 0.816 1 1 1 69.365 69.365 3 1.7302E-11 24447 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.49 88.373 50.298 123.83 27.387 0 36.688 78.903 47 120 28 0 37 75 1 3 1 0 1 2 22343 7557 3155 7282 17627;17628;17629 20387;20388;20389 20387 3 GIIDPTK Unmodified 742.4225 0.42250475 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 10.5 2.5 1 1 50.838 50.838 2 0.017172 14354 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.55 17.316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7558 1766 7283 17630;17631 20390;20391 20390 2 GIIDSTAGEQR Unmodified 1145.5677 0.56766543 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 5.5 0.5 1 1 42.126 42.126 2 1.1737E-07 12153 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.3 68.645 78.484 86.992 80.631 79.925 85.935 71.102 74 88 83 79 88 69 1 1 1 1 1 1 5668.7 7559 928 7284 17632;17633 20392;20393 20392 2 GIIDSTHTEQR Unmodified 1255.6157 0.61567826 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 4.5 0.5 1 1 33.947 33.947 3 1.6869E-10 8635 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 134.75 105.41 60.088 0 70.33 60.71 83.777 37.808 56 0 65 56 84 37 1 0 1 1 2 1 21454 7560 1042 7285 17634;17635 20394;20395 20394 2 GIIDSTTGEQR Unmodified 1175.5782 0.57823012 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 7.33 4.03 1 1 1 41.976 41.976 2 5.3611E-15 12525 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 161.28 85.46 58.044 0 110.36 30.604 67.99 49.036 56 0 102 28 65 46 2 0 1 1 1 1 22570 7561 487 7286 17636;17637;17638 20396;20397;20398 20396 3 GIIDSTVSEQR Unmodified 1203.6095 0.60953025 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 47.617 47.617 2 5.4633E-13 14892 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.73 89.136 197.94 181.47 120.78 235.24 161.55 67.777 186 185 120 222 167 65 3 3 2 3 3 1 66888 7562 1096 7287 17639;17640;17641;17642 20399;20400;20401;20402 20402 4 GIILVGNEEQK Unmodified 1198.6558 0.65575216 2567 Q8JZN5 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 0 6 0 1 59.962 59.962 3 0.013588 20068 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.004 24.293 69.416 34.249 26.197 38.038 44.728 47.76 65 37 28 37 46 46 1 1 1 1 1 1 2697.9 7563 2567 7288 17643 20403 20403 1 GIIPLENLSIR Unmodified 1223.7238 0.72377215 1172;256;424 O08967;G5E8Q4;A0A1Y7VIW9;A0A1B0GRX7;Q99KH2;P63034;A2A517;Q3TZ02;Q9QX11 Cyth3;Cyth2;Cyth1 Cytohesin-3;Cytohesin-2;Cytohesin-1 no no 0 0 0 0 10 0 1 75.567 75.567 2 0.041982 22900 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.092 12.789 50.431 0 0 39.925 27.454 0 47 0 0 37 28 0 1 0 0 1 1 0 1533.2 7564 1172;256;424 7289 17644 20404 20404 1 GIIQHAPNLENIELYWNSYNNR Unmodified 2657.2986 0.29864822 3277;377 Q9QYG0;A0A2I3BPW0 Ndrg2 Protein NDRG2 no no 0 0 0 0 9 1.91 1 2 2 1 78.395 78.395 3;4 5.9353E-23 29953 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.35 116.06 48.49 153.55 121.5 99.872 159.12 127.73 46 149 121 93 158 121 1 4 3 3 5 4 42355 7565 3277;377 7290 17645;17646;17647;17648;17649;17650 20405;20406;20407;20408;20409;20410;20411 20411 7 GIIQHAPNLENIELYWNSYNNR Deamidation (N) 2658.2827 0.28266381 3277;377 Q9QYG0;A0A2I3BPW0 Ndrg2 Protein NDRG2 no no 0 1 0 0 7 0 2 79.413 79.413 3;4 3.0766E-12 28347 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.708 63.454 0 29.792 0 0 66.701 37.539 0 28 0 0 65 37 0 1 0 0 1 1 2703.2 7566 3277;377 7290 17651;17652 20412;20413 20412 99;100 2 GIKNELECVTNISLANIIR Unmodified 2156.1623 0.16233766 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 1 9 0 1 88.483 88.483 3 0.034344 31183 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.214 21.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7567 2674 7291 17653 20414 20414 1 GILAADESTGSIAK Unmodified 1331.6933 0.69325988 1309 P05064;A6ZI44;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 8.56 3.27 2 1 2 1 3 58.868 58.868 2;3;4 5.0917E-129 20348 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 244.12 193.52 1437.6 1216.9 1194.1 1019.8 1549.2 1697.4 1350 1243 1200 991 1562 1631 8 9 8 8 9 11 856150 7568 1309 7292 17654;17655;17656;17657;17658;17659;17660;17661;17662 20415;20416;20417;20418;20419;20420;20421;20422;20423;20424;20425;20426 20423 12 GILAADESVGSMAK Unmodified 1347.6704 0.67041595 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 6.5 0.5 1 1 63.614 63.614 3 1.0159E-16 21739 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.61 87.931 191.96 87.467 124.09 178.19 69.825 180.29 180 92 120 171 74 171 3 2 2 3 1 3 51169 7569 1308 7293 17663;17664 20427;20428;20429 20427 3 GILAVAWSMADPELLLSCGK Unmodified 2130.0853 0.085332894 2001 Q3UPL0 Sec31a Protein transport protein Sec31A yes yes 0 0 0 0 11 0 1 108.89 108.89 4 0.023911 35565 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.181 23.531 0 0 0 9.837 0 9.594 0 0 0 9 0 9 0 0 0 1 0 1 717.17 7570 2001 7294 17665 20430 20430 1 GILDGNSAPVFPQPFGVK Unmodified 1841.9676 0.96758424 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 0 8.67 0.471 1 2 82.896 82.896 3;4 3.3679E-07 28602 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.078 58.755 29.387 39.368 0 39.373 56.767 29.848 28 37 0 37 56 28 2 1 0 1 1 1 16947 7571 1625 7295 17666;17667;17668 20431;20432;20433 20432 3 GILFVGSGVSGGEEGAR Unmodified 1590.8002 0.80018457 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 8 0 1 65.484 65.484 3 0.017503 21234 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.136 13.662 0 58.493 65.246 35.341 64.379 57.859 0 56 65 37 65 56 0 1 1 1 1 1 8558.8 7572 3142 7296 17669 20434 20434 1 GILLFGPPGTGK Unmodified 1155.6652 0.66519463 2712 Q8VEJ9;P46467;Q8BPY9 Vps4a;Vps4b;Fignl1 Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B;Fidgetin-like protein 1 yes no 0 0 0 0 9.25 4.82 1 1 1 1 76.142 76.142 2;3 0.00013782 20287 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.171 51.299 9.6017 0 86.796 187.81 138.68 245.22 9 0 83 176 139 232 1 0 3 4 3 4 38153 7573 2712 7297 17670;17671;17672;17673 20435;20436;20437;20438;20439;20440 20439 6 GILLGVVGTDVPVK Unmodified 1365.8232 0.82315184 3378 Q9Z1L5;A0A286YCT5 Cacna2d3 Voltage-dependent calcium channel subunit alpha-2/delta-3;Voltage-dependent calcium channel subunit alpha-2-3;Voltage-dependent calcium channel subunit delta-3 yes no 0 0 0 0 10 0.816 1 1 1 80.108 80.108 2;3 6.4332E-21 25114 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.8 105.99 0 78.278 27.387 76.604 0 29.848 0 74 28 74 0 28 0 2 1 2 0 1 12880 7574 3378 7298 17674;17675;17676 20441;20442;20443 20442 3 GILLYGPPGCGK Unmodified 1230.6431 0.64307898 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8.14 4.67 2 1 1 1 1 1 66.533 66.533 2;3 4.6426E-21 24098 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.75 113.49 1096 1254.1 617.45 564.85 1187.7 567.04 1028 1262 614 555 1152 539 5 6 5 6 5 5 564830 7575 1554 7299 17677;17678;17679;17680;17681;17682;17683 20444;20445;20446;20447;20448;20449;20450;20451;20452;20453 20453 10 GILLYGTK Unmodified 863.51165 0.5116541 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 11 0.816 1 1 1 63.447 63.447 2 0.0011868 15460 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.84 56.374 157.9 279.84 126.45 61.457 109.1 0 148 275 125 65 107 0 1 2 1 1 1 0 27673 7576 577 7300 17684;17685;17686 20454;20455;20456 20456 3 GILPPLMQK Unmodified 995.58377 0.58377319 485 A2AKW0;Q5HZI9;G3UYJ3;A2AKV9 Slc25a51 Solute carrier family 25 member 51 yes no 0 0 0 0 11 0 1 71.583 71.583 2 0.042409 20856 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.559 8.2007 48.809 35.031 62.572 0 0 49.036 46 37 60 0 0 46 1 1 1 0 0 1 4555.7 7577 485 7301 17687 20457 20457 1 GILSCEASAVPMAEFQWFK Unmodified 2170.0227 0.022732637 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 0 0 0 8.5 0.5 1 1 93.119 93.119 3 2.7841E-07 33125 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.143 58.656 36.199 9.145 39.884 0 83.165 106.36 34 9 37 0 83 102 2 1 1 0 3 3 13107 7578 1103;2192 7302 17688;17689 20458;20459;20460 20460 3 GILSLIQSSTR Unmodified 1173.6717 0.67173657 804 E0CYB9;Q6PCP5;F7BC60 Mff Mitochondrial fission factor yes no 0 0 0 0 6.5 5.5 1 1 74.943 74.943 2 5.8341E-13 25791 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.3 95.439 127.66 166.12 176.88 66.076 0 99.138 120 167 176 65 0 93 1 2 2 1 0 1 50603 7579 804 7303 17690;17691 20461;20462 20461 2 GILTSALEDE Unmodified 1046.5132 0.51317025 2854 Q99L43;A2AMQ5;F6S4G2 Cds2 Phosphatidate cytidylyltransferase 2;Phosphatidate cytidylyltransferase yes no 0 0 0 0 4.5 0.5 1 1 75.032 75.032 2 3.1186E-09 27652 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.52 128.18 29.654 46.508 45.092 28.37 36.08 38.412 28 46 47 28 37 37 1 1 2 1 1 1 10259 7580 2854 7304 17692;17693 20463;20464 20463 2 GILVFQLK Unmodified 916.57459 0.57458871 858 E9PYX7;E9Q852;E9Q9C3;Q9QZQ1 Mllt4 Afadin yes no 0 0 0 0 6.5 5.5 1 1 78.455 78.455 2 0.0003273 21130 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 155.19 85.845 60.088 0 0 0 72.174 37 56 0 0 0 69 37 1 0 0 0 1 1 8043.7 7581 858 7305 17694;17695 20465;20466 20466 2 GILVGIK Unmodified 698.46906 0.46906101 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 9.83 4.06 1 1 1 2 1 63.621 63.621 2;3 0.0060976 21535 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.79 71.351 5334.6 3143.3 313.16 4030.2 2742 4482.4 5056 3234 308 3730 2767 4271 7 6 2 4 4 4 1213600 7582 1308 7306 17696;17697;17698;17699;17700;17701 20467;20468;20469;20470;20471;20472;20473 20467 7 GINDGGDLPEELLR Unmodified 1496.7471 0.74708636 424 A2A517;Q3TZ02;Q9QX11 Cyth1 Cytohesin-1 yes no 0 0 0 0 3 0 1 71.111 71.111 2 0.0027667 26352 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.574 37.953 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1178.6 7583 424 7307 17702 20474 20474 1 GINEGGDLPEDLLR Unmodified 1496.7471 0.74708636 256 A0A1Y7VIW9;A0A1B0GRX7;Q99KH2;P63034;A0A1B0GRB2;A0A1B0GRB8 Cyth2 Cytohesin-2 yes no 0 0 0 0 3.5 0.5 1 1 69.73 69.73 2 0.0024521 25780 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.267 40.83 0 9.576 8.8602 50.309 28.383 0 0 9 9 47 28 0 0 1 1 2 1 0 2715.3 7584 256 7308 17703;17704 20475;20476 20475 2 GINEGGDLPEELLR Unmodified 1510.7627 0.76273643 1172 O08967;G5E8Q4 Cyth3 Cytohesin-3 yes no 0 0 0 0 3 0 1 70.222 70.222 2 0.00038193 25981 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.466 50.24 9.5356 14.112 8.4517 8.79 28.884 0 9 14 9 9 28 0 1 1 1 1 1 0 1534.5 7585 1172 7309 17705 20477 20477 1 GINLPTPTGLSPSDLDAFVR Unmodified 2069.0793 0.079319539 843 E9PX94;Q8K1A6 Cc2d1a Coiled-coil and C2 domain-containing protein 1A yes no 0 0 0 0 13 0 1 88.158 88.158 3 0.043705 34804 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 27.904 3.3658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7586 843 7310 17706 20478 20478 1 GIPAPEEER Unmodified 996.48762 0.4876242 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 40.778 40.778 2 0.00094231 12530 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.12 58.12 227.58 110.11 127.35 188.95 38.702 286.75 213 111 120 176 37 269 4 2 2 3 1 4 46256 7587 2420 7311 17707;17708;17709;17710 20479;20480;20481;20482;20483 20480 5 GIPEFWFTIFR Unmodified 1411.7289 0.72885752 637 B7ZNL2;Q78ZA7 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 0 11.5 0.5 1 1 100.64 100.64 2 1.2643E-07 28591 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.61 81.037 43.963 28.082 37.881 8.6985 32.026 0 43 28 37 9 31 0 2 2 2 1 2 0 12373 7588 637 7312 17711;17712 20484;20485;20486 20486 3 GIPEFWLTVFK Unmodified 1335.7227 0.72270951 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 11.5 1.12 1 1 1 1 98.597 98.597 3 1.0601E-08 28206 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.83 90.644 59.948 136.3 0 175.7 130.75 58.919 56 130 0 163 130 56 2 3 0 4 2 3 50390 7589 833 7313 17713;17714;17715;17716 20487;20488;20489;20490;20491;20492 20491 6 GIPELEQYDPPELADSSSR Unmodified 2101.9804 0.98039336 3171 Q9EQC5 Scyl1 N-terminal kinase-like protein yes yes 0 0 0 0 4 0 1 72.185 72.185 3 0.014392 26346 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.649 19.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7590 3171 7314 17717 20493 20493 1 GIPHLVTHDAR Unmodified 1214.652 0.65200419 1730 P62702;V9GWY0 Rps4x;Gm15013 40S ribosomal protein S4, X isoform;40S ribosomal protein S4 yes no 0 0 0 0 7.5 0.5 1 1 37.488 37.488 4 0.0048791 8740 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.567 30.191 49.073 29.792 47.85 58.356 0 88.478 46 28 46 56 0 83 1 1 1 2 0 2 7200.9 7591 1730 7315 17718;17719 20494;20495 20494 2 GIPILVGLLDHPK Unmodified 1370.8286 0.82857157 756 D3Z2H7;E9Q986;E9Q8Z6;E9Q8Z5;G3X9V2;E9Q904;E9Q901;E9Q903;D3Z2H2;E9Q8Z9;E9Q8Z4;E9Q905;E9Q907;E9Q906;D3Z7H6;E9Q8Z8;P30999 Ctnnd1 Catenin delta-1 yes no 0 0 0 0 11 0 1 82.458 82.458 3 0.00034663 25720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.548 39.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6138.1 7592 756 7316 17720 20496 20496 1 GIPILVGLLDHPKK Unmodified 1498.9235 0.92353459 756 D3Z2H7;E9Q986;E9Q8Z6;E9Q8Z5;G3X9V2;E9Q904;E9Q901;E9Q903;D3Z2H2;E9Q8Z9;E9Q8Z4;E9Q905;E9Q907;E9Q906;D3Z7H6;E9Q8Z8;P30999 Ctnnd1 Catenin delta-1 yes no 0 0 0 1 12 0 1 76.761 76.761 4 0.0027229 20536 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.013 45.529 9.657 0 0 51.371 0 49.036 9 0 0 47 0 46 1 0 0 1 0 1 2762.7 7593 756 7317 17721 20497 20497 1 GIPNVLR Unmodified 767.46537 0.46537261 2913 Q9CQ69 Uqcrq Cytochrome b-c1 complex subunit 8 yes yes 0 0 0 0 9 0 1 53.547 53.547 2 0.052374 14727 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.915 8.0266 327.86 275.73 386.99 376.97 0 609.75 309 286 390 366 0 572 1 1 1 1 0 1 48928 7594 2913 7318 17722 20498 20498 1 GIQEEMEALVK Oxidation (M) 1261.6224 0.62240312 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 0 4 0.816 1 1 1 60.808 60.808 3 0.0015496 19200 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.632 46.534 30.044 0 69.066 28.366 65.688 49.332 28 0 65 28 65 47 1 0 2 1 2 2 18824 7595 1158 7319 17723;17724;17725 20499;20500;20501 20500 55 3 GIQEEMEALVK Unmodified 1245.6275 0.6274885 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 8 3.65 1 1 1 1 2 73.895 73.895 2;3 1.1565E-08 27344 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.74 68.651 920.78 579.52 746.61 449.03 659.48 668.75 865 613 737 445 665 645 9 8 7 5 6 6 388280 7596 1158 7319 17726;17727;17728;17729;17730;17731 20502;20503;20504;20505;20506;20507;20508;20509;20510;20511 20505 10 GIQEIADSVK Unmodified 1058.5608 0.56078914 2423 Q8BKZ9 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 62.066 62.066 2;3 0.0013395 21783 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.979 34.468 128.29 136.84 144.02 162.89 64.957 88.478 121 139 148 158 65 83 2 2 2 2 1 1 12037 7597 2423 7320 17732;17733;17734;17735 20512;20513;20514;20515 20512 4 GIQFLISR Unmodified 932.54435 0.54435122 1918 Q3TES0;A0A0N4SWH8 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes no 0 0 0 0 10 0 1 67.23 67.23 2 0.021212 19203 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.486 29.719 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7598 1918 7321 17736 20516 20516 1 GIQTLADPGSFDSNAFALLLR Unmodified 2205.143 0.14298243 2165 Q63829 Commd3 COMM domain-containing protein 3 yes yes 0 0 0 0 9 0 1 97.035 97.035 3 9.3027E-09 34751 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.688 56.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1656.4 7599 2165 7322 17737 20517 20517 1 GIRDDIEEEDDQEAYFR Unmodified 2098.908 0.90795669 2351 Q810A7 Ddx42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 1 1 0 1 56.906 56.906 3 0.00039322 18073 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 61.962 45.656 0 0 20.558 0 18.867 29.31 0 0 19 0 19 28 0 0 1 0 1 1 3803.1 7600 2351 7323 17738 20518 20518 1 GIRPAINVGLSVSR Unmodified 1437.8416 0.84159587 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 9.86 3.87 1 1 1 1 1 2 54.552 54.552 2;3 7.5166E-29 13427 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 156.6 122.42 1210.6 866.81 1409.5 765.98 1561.5 1112.8 1137 864 1368 751 1549 1065 8 8 9 8 9 8 934280 7601 1881 7324 17739;17740;17741;17742;17743;17744;17745 20519;20520;20521;20522;20523;20524;20525;20526;20527;20528;20529;20530 20526 12 GISEETTTGVHNLYK Unmodified 1647.8104 0.8104149 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 5 0 1 50.856 50.856 3 0.00045111 16424 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.727 41.408 0 0 0 60.178 54.766 0 0 0 0 56 55 0 0 0 0 1 1 0 2713.9 7602 1594 7325 17746 20531 20531 1 GISHVIVDEIHER Unmodified 1502.7841 0.78414057 16 A0A087WPL5;E9QNN1;O70133;Q3UR42 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 5 0 1 50.314 50.314 4 8.7065E-05 16184 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.793 76.102 69.509 0 39.684 0 29.288 0 65 0 37 0 28 0 1 0 1 0 1 0 2831.7 7603 16 7326 17747 20532 20532 1 GISLNMEQWSQLK Deamidation (N) 1533.7497 0.7497289 1351 P11031 Sub1 Activated RNA polymerase II transcriptional coactivator p15 yes yes 0 1 0 0 9 0 1 78.04 78.04 3 0.024179 26440 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.825 24.574 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7604 1351 7327 17748 20533 20533 420 1 GISNQPFPELHCAALK Deamidation (N) 1781.8771 0.87705468 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 1 0 0 8 0 1 62.101 62.101 3 0.0017227 19551 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.514 26.533 29.59 46.328 37.105 0 43.932 0 28 46 37 0 42 0 1 1 1 0 1 0 4082.9 7605 2418 7328 17749 20534 20534 925 1 GISPVPINLR Unmodified 1064.6342 0.63422886 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 0 0 0 8.56 3.24 1 1 2 2 1 1 1 62.759 62.759 2;3 0.00010398 19316 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.06 66.245 475.41 607.29 181.77 584.29 448.22 608.95 446 602 181 550 464 580 7 7 3 5 4 5 545570 7606 118;1534;1082 7329 17750;17751;17752;17753;17754;17755;17756;17757;17758 20535;20536;20537;20538;20539;20540;20541;20542;20543 20540 9 GISQEQCEAR Unmodified 1176.5193 0.51933503 1821 P70699;A2AFL3 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 3 0 1 30.421 30.421 2 0.0063757 7589 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.922 66.659 20.138 28.134 17.947 18.434 67.143 0 19 28 19 19 65 0 1 1 1 1 1 0 2475.1 7607 1821 7330 17759 20544 20544 1 GISQEQMNEFR Unmodified 1337.6034 0.60339901 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 5 0 1 51.256 51.256 2 5.6338E-08 16583 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.86 93.552 39.613 17.545 0 29.902 37.328 0 37 19 0 28 37 0 1 1 0 1 1 0 4074.4 7608 418 7331 17760 20545 20545 1 GISQEQMQEFR Unmodified 1351.619 0.61904908 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 4.5 0.5 1 1 51.531 51.531 2 0.0032517 16736 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.652 35.461 30.044 0 19.685 50.198 0 39.442 28 0 19 47 0 37 1 0 1 2 0 1 5480.7 7609 310 7332 17761;17762 20546;20547 20547 2 GISQTNLITTVTPEKK Unmodified 1728.9622 0.96216452 3345;369 A0A286YDY4;A0A286YCY1;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 8.5 0.5 1 1 59.862 59.862 3;4 0.0013632 17783 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.215 43.929 168.68 0 143.31 140.1 174.53 243.4 158 0 139 139 181 233 1 0 1 1 1 1 6839 7610 369;3345 7333 17763;17764 20548;20549 20549 2 GISSIPINLR Unmodified 1068.6291 0.62914348 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 8.5 0.5 1 1 63.936 63.936 2 0.00013436 19706 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.9 65.711 197.91 0 99.98 0 103.76 154.81 185 0 93 0 102 148 2 0 1 0 1 2 18949 7611 960 7334 17765;17766 20550;20551;20552 20551 3 GISVHISNAEPK Unmodified 1250.6619 0.66190017 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WQA5;A0A087WR97;A0A087WSH7;H3BJV1;A0A087WRP4;A0A087WS74;A0A087WNY6;A0A087WQX8;A0A087WSC6 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 7 0 1 47.383 47.383 3 0.00026905 13331 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.846 43.244 59.537 54.797 46.184 0 0 69.29 56 56 46 0 0 65 1 1 1 0 0 1 7274.6 7612 2793 7335 17767 20553 20553 1 GITAFIVEK Unmodified 976.55933 0.55933258 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 71.335 71.335 2;3 0.00042787 23273 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.07 55.8 275.75 353.34 155.24 147.98 400.25 269.62 259 352 157 140 398 260 3 4 2 2 4 3 28209 7613 3202 7336 17768;17769;17770;17771 20554;20555;20556;20557 20555 4 GITFDSGGISIK Unmodified 1193.6292 0.62920306 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 10.5 2.5 1 1 70.362 70.362 2;3 8.7553E-08 23565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.86 67.478 39.222 125.12 58.344 96.102 110.05 47.786 37 121 65 93 111 46 1 2 2 2 2 1 10954 7614 2904 7337 17772;17773 20558;20559 20558 2 GITGIEDK Unmodified 831.4338 0.43379771 1537 P40142 Tkt Transketolase yes yes 0 0 0 0 5.5 0.5 1 1 51.014 51.014 2 0.012022 16546 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.069 26.265 187.11 268.74 290.88 300.89 397.97 344.69 176 269 297 298 405 334 1 2 2 2 2 2 27272 7615 1537 7338 17774;17775 20560;20561 20560 2 GITGVDLFGTTDAVVK Unmodified 1591.8457 0.84573777 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 7 0 1 80.003 80.003 3 0.0024262 28620 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.639 28.316 0 19.765 26.957 48.339 17.653 0 0 19 28 46 19 0 0 1 1 1 1 0 2141.6 7616 1043 7339 17776 20562 20562 1 GITINAAHVEYSTAAR Unmodified 1672.8533 0.85328277 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 0 9.2 2.79 1 1 1 1 1 50.371 50.371 3 1.5187E-12 15574 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.43 92.607 117.85 109.26 167.37 114.31 48.116 119.39 111 112 166 111 46 112 3 3 4 3 1 2 29653 7617 2361 7340 17777;17778;17779;17780;17781 20563;20564;20565;20566;20567 20563 5 GITMATAK Unmodified 791.42112 0.42112454 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 9 0 1 48.098 48.098 2 0.008163 12276 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.56 44.358 0 33.44 36.354 37.579 36.976 0 0 32 37 37 37 0 0 1 1 1 1 0 2358.5 7618 287;1450 7341 17782 20568 20568 1 GITNLCVIGGDGSLTGADTFR Unmodified 2123.0317 0.031717419 1568 P47857;A0A2R8VHV2 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 9.33 2.62 1 1 1 76.653 76.653 3 1.9309E-11 29204 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.85 88.929 0 29.792 0 59.289 102.01 57.066 0 28 0 56 102 55 0 1 0 2 2 1 31394 7619 1568 7342 17783;17784;17785 20569;20570;20571 20571 3 GITWGEDTLMEYLENPK Unmodified 1994.9295 0.92954376 1753 P62897 Cycs Cytochrome c, somatic yes yes 0 0 0 0 9.75 3.27 1 1 2 93.665 93.665 3;4 1.3839E-12 37408 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.7 109.43 126.26 108.21 212.3 0 170.05 155.09 120 107 200 0 167 149 4 4 5 0 4 4 43516 7620 1753 7343 17786;17787;17788;17789 20572;20573;20574;20575;20576;20577;20578 20577 7 GITWGEDTLMEYLENPKK Unmodified 2123.0245 0.024506776 1753 P62897 Cycs Cytochrome c, somatic yes yes 0 0 0 1 8.5 2.69 1 1 1 1 86.308 86.308 3;4 2.3742E-07 32313 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.751 68.329 88.628 229.59 349.49 37.351 398.9 456.85 83 223 336 37 398 438 2 3 3 1 4 3 53381 7621 1753 7344 17790;17791;17792;17793 20579;20580;20581;20582 20579 4 GIVDKEEGDVLEAVLEK Unmodified 1841.9622 0.9622241 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 1 5.5 0.5 2 2 82.434 82.434 3;4 8.9292E-06 30531 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.403 52.222 160.13 61.386 86.255 107.03 172.93 231.72 150 66 83 102 175 222 5 3 2 3 4 5 13054 7622 3192 7345 17794;17795;17796;17797 20583;20584;20585;20586;20587 20586 5 GIVDQSQQAYQEAFEISK Unmodified 2039.98 0.97999942 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 6.6 2.24 3 4 2 1 76.045 76.045 3;4 1.0382E-53 27691 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 168.64 144.84 1786.6 1433.2 1900.5 1600.4 1889.7 2119.9 1682 1471 1900 1582 1931 2038 13 10 13 13 11 13 797130 7623 1773 7346 17798;17799;17800;17801;17802;17803;17804;17805;17806;17807 20588;20589;20590;20591;20592;20593;20594;20595;20596;20597;20598;20599;20600;20601;20602;20603;20604 20604 17 GIVDQSQQAYQEAFEISKK Unmodified 2168.075 0.074962442 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 1 6 0 1 70.112 70.112 4 0.0010938 24743 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.238 29.148 48.895 0 77.788 45.642 0 0 46 0 74 46 0 0 1 0 1 1 0 0 9753.1 7624 1773 7347 17808 20605 20605 1 GIVEESVTGVHR Unmodified 1281.6677 0.66771383 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 7 3.54 1 1 1 1 43.871 43.871 3 1.9003E-23 13099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 167.11 118.32 247.91 547.14 500.79 409.43 743.13 535.05 232 534 507 407 746 520 3 3 2 1 4 3 82540 7625 2298;1040 7348 17809;17810;17811;17812 20606;20607;20608;20609 20607 4 GIVEFASK Unmodified 849.45962 0.45961853 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 11 2 1 1 59.122 59.122 2 0.011684 20615 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.439 44.591 158.8 86.898 84.592 170.03 205.38 279.83 148 83 83 158 213 268 1 1 1 1 2 2 16306 7626 2724 7349 17813;17814 20610;20611 20611 2 GIVEFSGK Unmodified 835.44397 0.44396847 2839 Q99K48 Nono Non-POU domain-containing octamer-binding protein yes yes 0 0 0 0 9.33 2.62 1 1 1 57.16 57.16 2 0.0081493 19438 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.568 53.195 99.258 0 89.306 0 116.11 0 93 0 83 0 111 0 1 0 1 0 1 0 5302.5 7627 2839 7350 17815;17816;17817 20612;20613;20614 20614 3 GIVFHYR Unmodified 890.47627 0.47627165 2122 Q61282 Acan Aggrecan core protein yes yes 0 0 0 0 10.5 0.5 1 1 45.469 45.469 3 0.0089196 9930 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.748 41.353 69.143 27.31 78.081 0 0 88.478 65 28 74 0 0 83 2 1 2 0 0 2 12618 7628 2122 7351 17818;17819 20615;20616 20615 2 GIVIATGDR Unmodified 900.50288 0.50288033 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 9.33 2.62 1 1 1 47.22 47.22 2 2.3143E-05 13375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.27 55.202 830.76 617.75 875.46 504.35 524.65 613.97 782 647 868 504 529 590 3 3 3 2 2 2 117780 7629 2253 7352 17820;17821;17822 20617;20618;20619 20617 3 GIVLLEELLPK Unmodified 1222.7537 0.75367529 2917 Q9CQ92;G3X9U9 Fis1 Mitochondrial fission 1 protein yes no 0 0 0 0 10 1.87 1 1 1 1 95.94 95.94 2;3 4.9262E-08 34277 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.86 91.54 74.798 71.455 35.062 40.367 12.125 115.85 70 68 34 38 12 109 3 3 2 2 1 4 16100 7630 2917 7353 17823;17824;17825;17826 20620;20621;20622;20623;20624;20625 20622 6 GIVNATK Unmodified 701.40719 0.40718903 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 42.105 42.105 2 0.016214 9683 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.17 43.75 410.51 354.15 135.94 294.44 302.43 149.47 385 361 139 282 302 144 3 3 1 3 2 1 20770 7631 141 7354 17827;17828 20626;20627;20628 20628 3 GIVNATKDPDAVGK Unmodified 1383.7358 0.73579339 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 1 7 0 1 50.004 50.004 3 0.003218 14462 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.401 43.735 88.367 62.136 63.717 54.765 140.64 65.277 83 65 65 56 139 65 1 1 1 1 1 1 5063.4 7632 141 7355 17829 20629 20629 1 GIVNGAAPELPVPTGGPMAGAR Deamidation (N) 2032.0412 0.041159893 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 1 0 0 5.33 0.471 2 1 72.387 72.387 3;4 2.077E-15 26405 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.276 79.997 0 69.774 26.893 80.372 0 88.478 0 66 28 75 0 83 0 2 1 2 0 3 18325 7633 1741 7356 17830;17831;17832 20630;20631;20632 20630 675 3 GIVPGVSPLVLHIK Unmodified 1427.8864 0.8864208 2005 Q3USB7 Plcl1 Inactive phospholipase C-like protein 1 yes yes 0 0 0 0 10 0 1 72.726 72.726 3 0.00094624 21859 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.11 29.102 59.583 34.419 55.733 55.965 102.17 56.781 56 37 56 56 102 56 1 1 1 1 1 1 4838.5 7634 2005 7357 17833 20633 20633 1 GIVPLAK Unmodified 696.45341 0.45341094 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 0 9.5 0.5 1 1 57.638 57.638 2 0.017943 14993 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.88 48.875 345.86 591.41 715.87 315.15 762.17 350.62 326 589 709 317 754 341 1 2 2 1 2 1 105790 7635 1470 7358 17834;17835 20634;20635 20635 2 GIVQSEEK Unmodified 888.45526 0.45526144 1192 O35382 Exoc4 Exocyst complex component 4 yes yes 0 0 0 0 5 0 1 41.309 41.309 2 0.013301 11758 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.476 44.353 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 1535.3 7636 1192 7359 17836 20636 20636 1 GIVVLGINR Unmodified 939.58655 0.58655038 150 A0A0R4J023;Q9JLZ3;A0A0R4J1L8;E9Q6L3;E9QMT1 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 11 0.816 1 1 1 62.37 62.37 2 3.3325E-05 17123 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.48 96.251 618.91 602.11 246.98 432.7 833.12 533.58 581 609 259 418 833 514 4 4 2 3 4 3 96384 7637 150 7360 17837;17838;17839 20637;20638;20639;20640 20637 4 GIVVYTGDR Unmodified 978.51345 0.51344502 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 9 2.94 1 1 1 49.533 49.533 2 2.4569E-05 15901 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.63 85.483 473.08 236.11 360.48 477.84 177.56 525.8 444 250 361 454 185 498 3 2 2 2 2 3 78344 7638 2699 7361 17840;17841;17842 20641;20642;20643 20643 3 GIWHNDNK Unmodified 982.46208 0.46207815 1883;1320 Q04447;P07310;A0A0J9YKD4 Ckb;Ckm Creatine kinase B-type;Creatine kinase M-type no no 0 0 0 0 8.86 2.47 1 2 1 1 1 1 39.88 39.88 2;3 0.00022826 8621 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 134.48 70.214 1158.8 1068.6 1302 1406.9 1299.1 1418.3 1090 1091 1312 1378 1319 1363 4 6 7 7 4 7 402110 7639 1883;1320 7362 17843;17844;17845;17846;17847;17848;17849 20644;20645;20646;20647;20648;20649;20650;20651;20652 20649 9 GIWHNDNK Deamidation (N) 983.44609 0.44609374 1883;1320 Q04447;P07310;A0A0J9YKD4 Ckb;Ckm Creatine kinase B-type;Creatine kinase M-type no no 0 1 0 0 10 3 1 1 45.053 45.053 3 0.010568 12383 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.229 41.267 277.73 197.62 42.622 272.47 80.782 243.94 260 204 46 253 83 231 2 2 1 2 1 2 42413 7640 1883;1320 7362 17850;17851 20653;20654 20653 387 2 GIWHNNEK Deamidation (N) 997.46174 0.4617438 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 1 0 0 6 0.816 1 1 1 43.289 43.289 3 0.021578 12870 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.2 32.39 39.305 36.116 35.963 38.298 0 0 37 37 37 37 0 0 1 1 1 1 0 0 2138.2 7641 1490 7363 17852;17853;17854 20655;20656;20657 20656 554;555 3 GIWHNNEK Unmodified 996.47773 0.47772821 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 38.906 38.906 3 0.00018843 9713 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.19 90.751 1503.2 1225.6 1678.9 1690.7 1199.1 1810 1414 1268 1667 1659 1244 1730 3 3 3 4 3 4 165090 7642 1490 7363 17855;17856;17857;17858 20658;20659;20660;20661 20658 4 GIYALAAR Unmodified 833.47594 0.4759373 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 10 0 1 52.444 52.444 2 0.0012301 12619 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.95 82.165 108.21 108.87 115.99 151.99 152.29 174.74 102 111 120 148 158 168 1 1 1 1 1 1 13965 7643 810 7364 17859 20662 20662 1 GIYAYGFEK Unmodified 1046.5073 0.50729701 1345;1679;135 A0A0N4SVP8;Q91VC3;A2AFK7;E9PV04;D6RJ60;D6RJ11;A0A0N4SVM5;P10630;Q8BTU6;A0A338P6X5;P60843 Eif4a3;Gm8994;Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 8.5 0.5 1 1 64.163 64.163 2 0.0066024 20565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.713 27.717 54.57 88.672 76.57 45.906 0 54.366 51 88 74 42 0 51 1 2 1 1 0 1 6241.3 7644 135;1345;1679 7365 17860;17861 20663;20664 20663 2 GIYAYGFEKPSAIQQR Unmodified 1826.9315 0.93153309 1345;1679;135 A0A0N4SVP8;Q91VC3;A2AFK7;E9PV04;D6RJ60;D6RJ11;A0A0N4SVM5;P10630;Q8BTU6;A0A338P6X5;P60843 Eif4a3;Gm8994;Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 1 10.8 1.48 1 1 1 1 60.358 60.358 3 6.3738E-45 16242 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 171.51 144.7 426.18 294.65 582.92 636.02 615.11 593.27 401 298 580 631 632 573 3 3 4 5 4 4 154120 7645 135;1345;1679 7366 17862;17863;17864;17865 20665;20666;20667;20668;20669 20666 5 GIYTGLSAGLLR Unmodified 1219.6925 0.69247202 2957 Q9CR62;Q5SX46;Q5SX48 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 5.5 4.5 1 1 70.754 70.754 2;3 0.0001715 23963 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.679 51.545 69.34 56.275 20.456 71.045 0 14.924 65 56 19 65 0 14 2 1 1 1 0 1 8304.6 7646 2957 7367 17866;17867 20670;20671 20670 2 GKDAFPVAGQK Unmodified 1116.5928 0.59275797 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 1 8 1 1 1 47.575 47.575 3 0.0027922 13547 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.132 32.837 216.82 111.83 73.71 175.11 160.74 0 203 120 74 167 158 0 2 2 1 2 1 0 13768 7647 1621 7368 17868;17869 20672;20673 20672 2 GKDCAVIVTQK Unmodified 1217.6438 0.64380726 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 1 7.5 0.5 1 1 46.218 46.218 3 0.0080117 12054 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.294 12.588 93.398 187.86 224.28 215.42 214.03 241.2 88 186 227 213 222 232 1 2 2 2 2 2 19286 7648 3256 7369 17870;17871 20674;20675 20675 2 GKDIVVLGVEK Unmodified 1155.6863 0.68632401 3399 Q9Z2U0;A0A338P7D7 Psma7 Proteasome subunit alpha type-7 yes no 0 0 0 1 8.5 0.5 1 1 60.357 60.357 3 0.016042 17902 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.276 37.644 158.86 84.289 100.13 0 97.278 0 149 83 93 0 93 0 2 1 1 0 1 0 24020 7649 3399 7370 17872;17873 20676;20677 20677 2 GKDLIGVQNLLK Unmodified 1296.7765 0.776536 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 10.8 1.33 1 1 2 1 68.201 68.201 3;4 3.7098E-13 21923 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.1 90.032 1740.8 1450.5 1440.8 2343.4 1346.6 2564.7 1635 1452 1435 2260 1376 2442 3 3 2 5 2 4 396820 7650 551 7371 17874;17875;17876;17877;17878 20678;20679;20680;20681;20682 20678 5 GKDLYLEDQGLAEK Unmodified 1577.7937 0.7937022 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 6 0 2 59.008 59.008 3;4 0.00025024 19653 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.62 57.412 49.026 65.854 0 30.604 0 115.7 46 65 0 28 0 112 1 1 0 1 0 2 7102.1 7651 510 7372 17879;17880 20683;20684 20683 2 GKDVFIIQTISK Unmodified 1347.7762 0.77620165 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 1 10 0 1 67.304 67.304 3 0.0080123 19277 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.7 35.022 68.752 102.55 80.008 74.036 110.43 66.139 65 102 83 74 111 65 1 1 1 1 1 1 5966 7652 2671 7373 17881 20685 20685 1 GKDVLGSAASGAR Unmodified 1187.6258 0.62584901 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 1 7.5 0.5 1 1 41.527 41.527 3 0.00048627 9837 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.344 38.846 412.39 290.66 234.61 380.05 377.33 474.26 387 303 233 367 393 455 2 2 1 2 2 2 33000 7653 2301;365 7374 17882;17883 20686;20687 20687 2 GKEDEGEEAASPMLQIQR Unmodified 1986.9317 0.93166902 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 4 0 1 53.07 53.07 3 1.2811E-07 17754 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.601 53.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7654 3204 7375 17884 20688 20688 1 GKEEVASALVHILQSTGK Unmodified 1866.0211 0.021076378 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 1 11.3 0.471 2 1 80.356 80.356 4;5 5.0867E-07 22098 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.087 68.688 0 97.111 395.08 244.51 162.8 204.51 0 93 389 242 166 194 0 1 4 3 2 2 57173 7655 992 7376 17885;17886;17887 20689;20690;20691;20692 20692 4 GKEEYIATFK Unmodified 1184.6077 0.60773933 2968 Q9CS84 Nrxn1 Neurexin-1 yes yes 0 0 0 1 12 0 1 58.673 58.673 4 0.032126 13501 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 46.606 3.5215 243.2 316.34 335.77 0 0 297.41 230 318 329 0 0 279 1 1 1 0 0 1 88068 7656 2968 7377 17888 20693 20693 1 GKELLAQK Unmodified 885.52837 0.5283668 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 1 9 0 1 46.937 46.937 3 0.028293 11680 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.347 9.7798 436.01 169.28 335.41 402.99 233.14 438.94 409 192 338 391 255 418 1 1 1 1 1 1 24859 7657 607 7378 17889 20694 20694 1 GKEPDGER Unmodified 886.41446 0.41445926 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 1 5 0 1 25.281 25.281 3 0.061429 4375 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.436 29.392 83.984 77.289 66.028 80.12 121.84 0 79 79 69 79 120 0 1 1 1 1 1 0 20667 7658 2050 7379 17890 20695 20695 1 GKEQELVQAVK Unmodified 1227.6823 0.68230126 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 1 6 0 1 53.644 53.644 3 0.022013 17080 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.359 26.038 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7659 2226 7380 17891 20696 20696 1 GKESSIENEIAVLR Unmodified 1543.8206 0.82058566 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 1 9 4 1 1 60.623 60.623 3 0.00017497 21552 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.529 55.12 186.37 189.56 256.4 64.496 254.73 232.58 176 194 251 65 254 225 2 2 2 1 2 2 12805 7660 2468 7381 17892;17893 20697;20698 20697 2 GKFQDNFEFIQWFK Unmodified 1832.8886 0.88860564 2243 Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 1 11 1.41 2 1 87.253 87.253 3;4 4.2146E-05 33602 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.728 51.935 30.044 20.216 0 61.208 0 29.848 28 19 0 56 0 28 1 1 0 2 0 1 4736.2 7661 2243 7382 17894;17895;17896 20699;20700;20701;20702 20702 4 GKGTFTSGLK Unmodified 994.54475 0.54474515 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 1 10.5 0.5 1 1 47.067 47.067 3 3.6272E-05 10322 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.24 54.82 158.06 146.81 0 149.27 141.32 193.18 148 148 0 139 148 185 1 1 0 1 1 1 62464 7662 3397 7383 17897;17898 20703;20704 20704 2 GKLEAIITPPPAK Unmodified 1333.7969 0.79693709 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 1 9.5 0.5 1 1 61.547 61.547 4 0.00011677 18730 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.633 58.68 88.148 168.34 213.85 0 0 118.33 83 166 213 0 0 111 1 2 3 0 0 1 11521 7663 3296 7384 17899;17900 20705;20706;20707 20706 3 GKNVLINK Unmodified 884.54435 0.54435122 1375 P14211 Calr Calreticulin yes yes 0 0 0 1 11 0 1 46.091 46.091 3 0.043784 10107 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.981 24.448 161 0 0 0 0 0 161 0 0 0 0 0 1 0 0 0 0 0 13275 7664 1375 7385 17901 20708 20708 1 GKPDVVVK Unmodified 840.5069 0.50690308 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 1 7 0 1 44.618 44.618 3 0.02664 12017 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.435 15.089 222.15 204.2 0 217.68 281.11 264.87 208 206 0 204 287 256 1 1 0 1 1 1 8128.5 7665 2622 7386 17902 20709 20709 1 GKPLPEPVLWTK Unmodified 1363.7864 0.7863724 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 1 10.8 1.48 1 1 1 1 65.663 65.663 3;4 6.6511E-13 20735 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.63 107.9 1106.8 645.07 811.08 686.88 602 710.03 1051 678 818 673 629 677 4 3 3 2 3 2 116380 7666 1072 7387 17903;17904;17905;17906 20710;20711;20712;20713 20710 4 GKPPPSFSWTR Unmodified 1258.6459 0.64585618 331 A0A1W2P7Y9;Q810U4;A0A1W2P814;A0A1W2P6P3;A0A1W2P7R6 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 1 10.5 0.5 1 1 50.953 50.953 3 0.0011272 12164 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.053 63.112 78.549 237.33 252.64 218.06 274.27 438.15 74 232 256 218 280 430 1 2 2 2 2 3 45912 7667 331 7388 17907;17908 20714;20715;20716 20715 3 GKPVPIHGSR Unmodified 1046.5985 0.59851205 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 9.4 1.02 1 2 1 1 30.528 30.528 3;4 0.0094648 4567 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.783 37.17 289.69 471.06 161.7 197.98 383.18 580.7 271 463 157 185 384 555 2 5 2 3 4 5 187400 7668 1390 7389 17909;17910;17911;17912;17913 20717;20718;20719;20720;20721;20722 20722 6 GKSEVEENGAVEIAR Deamidation (N) 1587.774 0.77402939 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 1 0 1 4 0 1 45.965 45.965 3 0.0031255 14346 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.682 33.624 0 39.368 0 0 67.99 0 0 37 0 0 65 0 0 1 0 0 1 0 3953.5 7669 1495 7390 17914 20723 20723 557 1 GKVEEVELPVEK Unmodified 1354.7344 0.73439641 244;2231 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LJ70;A0A140LHS4;A0A140LI33;Q6PAK3 Prmt1;Prmt8 Protein arginine N-methyltransferase 1;Protein arginine N-methyltransferase 8 no no 0 0 0 1 6 0 1 57.558 57.558 4 0.0048295 18890 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.555 20.547 79.053 0 58.576 36.297 34.689 68.3 74 0 56 37 37 65 1 0 1 1 1 1 2619.1 7670 244;2231 7391 17915 20724 20724 1 GKYSEVFEAINITNNEK Deamidation (N) 1955.9476 0.94763666 2083 Q60737;Q6NSS6;A2ANR6 Csnk2a1 Casein kinase II subunit alpha yes no 0 1 0 1 7 0 1 72.095 72.095 4 0.00058737 25018 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.862 33.996 49.179 0 30.048 0 0 59.696 46 0 28 0 0 56 1 0 1 0 0 1 23203 7671 2083 7392 17916 20725 20725 807 1 GLAAALLLCQNK Unmodified 1270.7067 0.70674187 3404 Q9Z315 Sart1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 0 12 0 1 75.33 75.33 3 0.00026729 19884 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.17 45.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7672 3404 7393 17917 20726 20726 1 GLAEDIENEVVQITWNR Unmodified 1984.9854 0.98541915 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 5 0 1 93.631 93.631 3 7.8393E-06 35099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.484 70.889 0 9.4451 7.8288 30.137 0 0 0 9 9 28 0 0 0 1 1 1 0 0 1160.2 7673 464 7394 17918 20727 20727 1 GLAEDVTR Unmodified 859.43995 0.43994572 3360 Q9Z0P4;A0A1W2P831 Palm Paralemmin-1 no no 0 0 0 0 4 1 1 1 41.069 41.069 2 0.0025547 12553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.56 5.9459 195.95 189.79 267.87 242.7 252.24 249.71 185 195 269 241 260 241 2 2 2 2 2 2 36100 7674 3360 7395 17919;17920 20728;20729 20728 2 GLAEEVK Unmodified 744.40177 0.4017693 3083 Q9D7X1 Kctd4 BTB/POZ domain-containing protein KCTD4 yes yes 0 0 0 0 5 0 1 46.98 46.98 2 0.030526 14523 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.71 21.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7675 3083 7396 17921 20730 20730 1 GLAFIQDPDGYWIEILNPNK Unmodified 2302.1634 0.16338352 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 8.8 2.23 2 1 1 1 99.256 99.256 3;4 4.4086E-14 35439 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.34 80.385 11.602 112.23 52.348 94.533 74.281 72.49 11 108 50 88 76 70 2 5 3 4 4 5 35803 7676 2897 7397 17922;17923;17924;17925;17926 20731;20732;20733;20734;20735;20736;20737;20738 20735 8 GLAGPFLDYLTR Unmodified 1321.703 0.7030367 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 84.593 84.593 2 2.6613E-15 26977 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 142.43 96.709 59.625 0 77.734 82.645 0 69.29 56 0 74 83 0 65 1 0 1 2 0 1 12946 7677 3391 7398 17927;17928 20739;20740 20739 2 GLAGVENVSELKK Unmodified 1342.7456 0.7456298 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 1 8 0 1 58.285 58.285 3 0.0017295 17788 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.092 34.094 168.95 116.29 0 0 110.43 165.28 158 120 0 0 111 158 1 1 0 0 1 1 5120.4 7678 3331 7399 17929 20741 20741 1 GLAITFVSDENDAK Unmodified 1478.7253 0.72528829 3379 Q9Z1N5 Ddx39b Spliceosome RNA helicase Ddx39b yes yes 0 0 0 0 6 0 1 70.284 70.284 3 6.2942E-05 24867 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.98 74.423 78.544 62.336 91.405 114.14 92.035 0 74 65 93 111 93 0 1 1 1 1 1 0 6724.6 7679 3379 7400 17930 20742 20742 1 GLALDTEAELER Unmodified 1315.662 0.66195975 2670 Q8R570 Snap47 Synaptosomal-associated protein 47 yes yes 0 0 0 0 3.5 0.5 1 1 60.96 60.96 2 1.5167E-26 21368 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 173.64 120.92 69.576 0 28.442 78.669 27.532 44.772 65 0 28 74 28 42 2 0 1 2 1 1 10305 7680 2670 7401 17931;17932 20743;20744 20744 2 GLALGIAK Unmodified 741.47487 0.47487467 1604 Q3UEE2;P51855;A2AQN7 Gss Glutathione synthetase yes no 0 0 0 0 10.5 0.5 1 1 60.978 60.978 2 0.013834 16572 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.512 11.795 247.17 137.23 0 250.12 125.88 134.99 231 139 0 231 130 130 2 1 0 2 1 1 11916 7681 1604 7402 17933;17934 20745;20746 20745 2 GLAPDLPEDLYHLIK Unmodified 1692.9087 0.90867238 1718 P62301;Q921R2 Rps13 40S ribosomal protein S13 yes no 0 0 0 0 7 0 1 85.431 85.431 3 3.7486E-05 31224 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.908 42.331 59.526 34.261 65.421 57.309 0 0 56 37 65 56 0 0 1 1 1 1 0 0 6182.1 7682 1718 7403 17935 20747 20747 1 GLAPEQPVTLR Unmodified 1179.6612 0.66117189 3282;1240 O55137;A0A1Y7VMZ4;Q91YQ6;Q6Q2Z6;Q9QYR7;Q32Q92;Q8BWN8;Q9QYR9 Acot1;Acot5;Acot3;Acot6;Acot4;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 5;Acyl-coenzyme A thioesterase 3;Acyl-coenzyme A thioesterase 6;Acyl-coenzyme A thioesterase 4;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 5.5 0.5 1 1 53.193 53.193 2;3 2.9776E-05 16835 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.52 54.921 49.074 56.275 0 0 66.005 57.813 46 56 0 0 65 56 1 1 0 0 1 1 8852.7 7683 1240;3282 7404 17936;17937 20748;20749 20749 2 GLAPEVADR Unmodified 926.48214 0.48214489 2105 Q61035;G5E823 Hars;Hars2 Histidine--tRNA ligase, cytoplasmic no no 0 0 0 0 4 0 1 43.551 43.551 2 0.0010463 13147 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.68 57.242 0 58.304 76.57 0 67.99 0 0 56 74 0 65 0 0 1 1 0 1 0 8165.7 7684 2105 7405 17938 20750 20750 1 GLAPNFMK Unmodified 876.45276 0.45275902 517 A2ASZ8 Slc25a25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 0 0 0 0 10 0 1 60.464 60.464 2 0.046548 16267 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7685 517 7406 17939 20751 20751 1 GLAPVQAYLHIPDIIK Unmodified 1747.0032 0.0032414695 974 G5E8R3;E9QPD7;Q05920;A0A286YCC5 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 10.8 1.48 1 1 1 1 82.62 82.62 3;4 0.00064225 26206 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.402 38.584 39.2 105.89 63.293 66.147 36.95 9.594 37 103 65 65 37 9 1 3 2 2 1 1 11386 7686 974 7407 17940;17941;17942;17943 20752;20753;20754;20755 20753 4 GLATFCLDK Unmodified 1023.5059 0.5059168 1228;2318 O55022;Q80UU9 Pgrmc1;Pgrmc2 Membrane-associated progesterone receptor component 1;Membrane-associated progesterone receptor component 2 no no 0 0 0 0 10.3 1.89 2 1 66.798 66.798 2;3 0.0011414 21136 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.57 51.018 0 155.41 220.9 124.34 345.89 208.94 0 148 213 130 343 203 0 2 2 2 3 2 25841 7687 1228;2318 7408 17944;17945;17946 20756;20757;20758 20756 3 GLAVFISDIR Unmodified 1089.6182 0.61824444 1401;1400 P17426;A0A140LHG0;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 10.4 1.5 2 1 1 1 78.348 78.348 2;3 2.8212E-09 24382 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.91 86.033 374.45 262.19 427.39 452.17 364 312.14 352 268 419 453 361 296 4 4 5 6 4 4 203030 7688 1400;1401 7409 17947;17948;17949;17950;17951 20759;20760;20761;20762;20763;20764;20765;20766 20763 8 GLAYFTEFLK Unmodified 1187.6227 0.62266112 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 11.5 1.5 1 1 88.73 88.73 2;3 0.00081356 34966 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.302 54.257 20.218 0 47.473 38.645 5.2643 69.14 19 0 47 37 9 65 1 0 2 1 1 1 7401.9 7689 1854 7410 17952;17953 20767;20768 20768 2 GLAYGLYLR Unmodified 1024.5706 0.57056597 2471 Q8BWR2 Pithd1 PITH domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 66.704 66.704 2 0.00081956 18385 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.793 28.994 0 135.87 146.53 122.43 0 108.73 0 130 148 120 0 102 0 1 1 1 0 1 9505.2 7690 2471 7411 17954;17955 20769;20770 20770 2 GLCAIAQAESLR Unmodified 1287.6605 0.66051996 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 7 0 1 61.245 61.245 2 0.00033451 19945 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.879 55.457 29.514 36.404 58.259 0 56.581 58.081 28 37 56 0 56 56 1 1 1 0 1 1 9913.2 7691 1755 7412 17956 20771 20771 1 GLCESVVEADLVEALEK Unmodified 1859.9186 0.91864472 2794 Q921F4;V9GXB6 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 0 4.5 0.5 1 1 91.563 91.563 3 0.00081025 33956 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.053 17.058 5.365 0 0 20.767 0 14.924 5 0 0 19 0 14 1 0 0 1 0 1 2688.9 7692 2794 7413 17957;17958 20772;20773 20772 2 GLCGAIHSSVAK Unmodified 1198.6128 0.61284149 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;A2AKV0;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 8.29 3.37 1 1 1 1 1 1 1 45.047 45.047 3 2.4915E-15 11584 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.76 104.87 627.42 654.13 589.53 138.99 732.22 635.98 594 662 580 134 727 612 4 5 4 2 5 4 120890 7693 484;2493 7414 17959;17960;17961;17962;17963;17964;17965 20774;20775;20776;20777;20778;20779;20780 20776 7 GLCVDGECVCEEPYTGEDCR Unmodified 2403.9076 0.90758082 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 2 0.707 1 2 1 59.106 59.106 3;4 7.1383E-11 20800 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.487 88.775 48.666 16.143 39.004 0 29.288 39.254 46 18 38 0 28 38 2 2 2 0 1 2 36885 7694 2479 7415 17966;17967;17968;17969 20781;20782;20783;20784;20785 20785 5 GLDASSK Unmodified 676.33917 0.33916905 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 0 6 0 1 38.472 38.472 2 0.02695 9920 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.296 26.581 0 67.938 73.088 65.181 80.168 106.44 0 65 74 65 83 102 0 1 1 1 1 1 7517.7 7695 573 7416 17970 20786 20786 1 GLDFSDR Unmodified 808.37153 0.37153181 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 5 0 1 49.161 49.161 2 0.0082148 15542 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.12 62.341 138.38 76.961 120.8 83.519 0 118.33 130 83 120 83 0 111 1 1 1 1 0 1 15743 7696 2844 7417 17971 20787 20787 1 GLDISNVK Unmodified 844.46543 0.46543219 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 7.5 0.5 1 1 56.305 56.305 2 0.019292 16807 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.825 16.844 0 154.95 150.84 0 293.64 130.2 0 148 148 0 285 130 0 1 1 0 1 1 5036.4 7697 2146 7418 17972;17973 20788;20789 20789 2 GLDPYNMLPPK Deamidation (N) 1244.6111 0.61111015 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 1 0 0 7 0 1 71.536 71.536 3 0.0037327 24698 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.439 40.834 0 0 0 120.96 77.273 116.12 0 0 0 112 83 111 0 0 0 1 1 1 8593.2 7698 1417 7419 17974 20790 20790 519 1 GLDPYNMLPPK Unmodified 1243.6271 0.62709457 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 0 11.3 2.36 1 2 71.116 71.116 2;3 5.3121E-05 26484 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.015 48.892 216.79 238.29 210.47 257.74 215.95 280.59 204 241 213 251 223 269 2 3 2 3 2 3 53048 7699 1417 7419 17975;17976;17977 20791;20792;20793 20792 3 GLDSLTNVDLR Unmodified 1201.6303 0.63026569 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 13 0 1 64.444 64.444 2 1.0205E-07 23345 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.46 44.084 87.689 109.9 137.06 141.52 119.02 0 83 111 139 139 120 0 1 1 1 1 1 0 16929 7700 3210 7420 17978 20794 20794 1 GLDTVVDLLADVVLHPR Unmodified 1831.0203 0.020348097 3137 Q9DC61;A2AIW9 Pmpca Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 0 9.5 0.5 1 1 107.67 107.67 3 1.7854E-08 37236 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.07 88.838 3.1998 0 3.2299 0 14 9.594 3 0 3 0 14 9 1 0 1 0 1 1 4439.3 7701 3137 7421 17979;17980 20795;20796 20795 2 GLDVEDVK Unmodified 873.44436 0.4443624 2135;1963 Q8BTS0;Q61656;Q501J6;Q3U741 Ddx5;Ddx17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 7.33 4.03 1 1 1 55.547 55.547 2;3 0.0060335 18661 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.877 37.8 300.3 202.97 43.005 58.645 199.43 192.59 288 204 46 56 196 186 3 2 1 1 1 2 47002 7702 2135;1963 7422 17981;17982;17983 20797;20798;20799 20798 3 GLDYGGVAR Unmodified 906.45593 0.45593014 844;1559 P46935;E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4;Nedd4l E3 ubiquitin-protein ligase NEDD4;E3 ubiquitin-protein ligase NEDD4-like no no 0 0 0 0 6 0 1 45.56 45.56 2 0.046669 13119 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.659 24.517 0 0 57.195 76.26 64.487 0 0 0 56 74 65 0 0 0 1 1 1 0 15590 7703 1559;844 7423 17984 20800 20800 1 GLDYLHSEK Unmodified 1060.5189 0.51892433 2842 Q99KH8;A2AD84;Q99JT2 Stk24;Stk26 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 35 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 26 yes no 0 0 0 0 6 0 1 48.911 48.911 3 0.06058 14756 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.754 11.655 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 3892.8 7704 2842 7424 17985 20801 20801 1 GLEAALVYVENAHVAGK Unmodified 1739.9206 0.92063405 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 8 0 1 77.16 77.16 3 0.00017209 26723 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.83 40.234 29.647 46.488 27.357 0 0 0 28 46 28 0 0 0 1 1 1 0 0 0 1287.8 7705 178 7425 17986 20802 20802 1 GLEAGLDTPK Unmodified 999.52368 0.52367535 2188 Q68FM6 Elfn2 Protein phosphatase 1 regulatory subunit 29 yes yes 0 0 0 0 5 0 1 54.177 54.177 2 0.042426 17971 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.756 20.494 39.516 36.703 0 0 29.288 0 37 37 0 0 28 0 1 1 0 0 1 0 1549.5 7706 2188 7426 17987 20803 20803 1 GLEATDDSPK Unmodified 1031.4771 0.47711909 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3.5 0.5 1 1 43.872 43.872 3 2.089E-05 13292 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.88 47.331 157.87 65.269 101.79 86.791 56.581 136.97 148 65 102 83 56 130 2 1 2 1 1 2 10454 7707 2382 7427 17988;17989 20804;20805 20805 2 GLECLVSILK Unmodified 1130.6369 0.63693097 1085 G3X9K3;D3YYK9;A2A5R2 Arfgef1;Arfgef2 Brefeldin A-inhibited guanine nucleotide-exchange protein 1;Brefeldin A-inhibited guanine nucleotide-exchange protein 2 yes no 0 0 0 0 10 0 1 87.15 87.15 3 0.046101 28090 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.308 17.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7708 1085 7428 17990 20806 20806 1 GLEDSYEGR Unmodified 1024.4462 0.44615331 1914 Q3TCN2 Plbd2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 28 kDa form;Putative phospholipase B-like 2 40 kDa form;Putative phospholipase B-like 2 15 kDa form yes yes 0 0 0 0 2.5 0.5 1 1 40.445 40.445 2 0.0010534 12210 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.6 73.707 98.733 63.926 123.39 47.578 48.116 98.072 93 65 120 46 46 92 3 2 3 1 1 2 10352 7709 1914 7429 17991;17992 20807;20808;20809 20809 3 GLEEPEMDPK Unmodified 1143.5118 0.51179004 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 4 0 1 53.71 53.71 2 0.035277 18064 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.531 24.159 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7710 1873 7430 17993 20810 20810 1 GLEESITR Unmodified 903.46616 0.46616048 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 0 0 0 0 4 0.816 1 1 1 43.856 43.856 2 0.00055098 13789 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 151.56 75.427 197.69 114.58 219.6 67.245 152.84 57.275 186 121 213 65 148 56 3 2 3 1 2 1 74675 7711 3360 7431 17994;17995;17996 20811;20812;20813 20811 3 GLEETVAK Unmodified 845.44945 0.44944778 2139 Q61768 Kif5b Kinesin-1 heavy chain yes yes 0 0 0 0 5 0 1 47.945 47.945 2 0.03937 14994 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.246 23.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7712 2139 7432 17997 20814 20814 1 GLEETVSR Unmodified 889.45051 0.45051041 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 3 0 1 38.837 38.837 2 0.036012 11521 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.429 21.898 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7713 1481 7433 17998 20815 20815 1 GLEEYLEK Unmodified 979.48623 0.48622722 1979 Q3UHD6;A0A0G2JF85;A0A0G2JGD5 Snx27 Sorting nexin-27 yes no 0 0 0 0 8 3.56 1 1 1 65.276 65.276 2;3 0.034465 23303 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.954 17.958 157.64 86.287 121.75 47.543 0 217.46 148 93 120 46 0 204 2 2 2 1 0 2 6897.3 7714 1979 7434 17999;18000;18001 20816;20817;20818 20816 3 GLEHPLFPK Unmodified 1036.5706 0.57056597 5 A0A087WNM1;Q91Z67;A0A087WSQ1;A0A087WS59 Srgap2 SLIT-ROBO Rho GTPase-activating protein 2 yes no 0 0 0 0 8.5 0.5 1 1 54.491 54.491 3 0.0079471 15991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.96 32.301 108.83 121.41 0 80.882 56.581 146.56 102 121 0 74 56 139 2 2 0 1 1 2 7910.6 7715 5 7435 18002;18003 20819;20820 20819 2 GLEISGTFTHR Unmodified 1216.62 0.62003536 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 6.75 4.26 1 1 1 1 50.172 50.172 3 1.5798E-09 14624 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.85 103.04 255.91 274.9 217.6 209.79 218.98 201.62 241 278 222 204 222 195 4 4 3 3 2 3 48665 7716 3123 7436 18004;18005;18006;18007 20821;20822;20823;20824;20825 20823 5 GLEISGTFTR Unmodified 1079.5611 0.56112349 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 7 0 1 58.376 58.376 2 0.0041896 18445 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.816 28.856 0 86.968 80.406 93.884 158.07 83.967 0 83 83 93 158 83 0 1 1 1 1 1 16813 7717 1203 7437 18008 20826 20826 1 GLEKPPHLAALVLAR Unmodified 1583.9511 0.95114632 168 A0A0R4J0B4;Q99KK2;A0A0N4SW65;A0A0N4SWC3 Cmas N-acylneuraminate cytidylyltransferase yes no 0 0 0 1 10 0 1 62.173 62.173 4 0.001053 17017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.209 46.196 88.644 82.335 0 0 150.89 114.02 83 83 0 0 148 111 1 1 0 0 1 1 10250 7718 168 7438 18009 20827 20827 1 GLELHAK Unmodified 766.43374 0.43373813 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 7 0 1 42.361 42.361 3 0.012994 10920 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.234 22.194 0 0 0 0 0 93 0 0 0 0 0 93 0 0 0 0 0 1 5821.7 7719 2244 7439 18010 20828 20828 1 GLELISK Unmodified 758.4538 0.45380487 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 8.5 0.5 1 1 61.94 61.94 2 0.02936 18800 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.794 12.379 187.79 139.57 58.782 77.379 0 217.46 176 144 60 74 0 204 2 2 1 1 0 2 26622 7720 3012 7440 18011;18012 20829;20830 20830 2 GLEQLTK Unmodified 787.44397 0.44396847 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 13 0 1 51.801 51.801 2 0.053041 17176 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.738 29.722 148.18 76.687 97.734 163.47 180.76 152.61 139 83 102 158 185 148 1 1 1 1 1 1 8935 7721 3373 7441 18013 20831 20831 1 GLESTTLADKDGEIYCK Unmodified 1898.8932 0.89315825 1842 P97315 Csrp1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 1 7.4 2.87 1 2 1 1 59.398 59.398 3;4 2.0587E-17 19845 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.77 107.38 414.15 408.74 273.35 289.21 279.3 593.25 389 407 268 278 286 564 4 4 3 4 3 5 49430 7722 1842 7442 18014;18015;18016;18017;18018 20832;20833;20834;20835;20836 20834 5 GLETFSQLVWK Unmodified 1306.6921 0.69213767 1486 P29416 Hexa Beta-hexosaminidase subunit alpha yes yes 0 0 0 0 10.5 0.5 1 1 84.176 84.176 3 0.019203 26721 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.765 20.383 20.267 9.0926 49.012 26.8 46.923 29.334 19 9 47 28 47 28 1 1 2 2 2 1 5018.4 7723 1486 7443 18019;18020 20837;20838 20837 2 GLETIASDVVSLASK Unmodified 1488.8035 0.80353861 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8.57 2.06 1 1 2 2 1 90.938 90.938 2;3 8.7835E-12 33813 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.78 84.829 232.19 123.2 314.71 156.25 252.94 94.638 218 121 306 158 251 93 4 4 5 5 5 2 77410 7724 2433 7444 18021;18022;18023;18024;18025;18026;18027 20839;20840;20841;20842;20843;20844;20845;20846;20847 20841 9 GLEVTAYSPLGSSDR Unmodified 1550.7577 0.75765105 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 0 8 3.56 1 1 1 64.278 64.278 2;3 2.127E-16 23107 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 129.74 85.317 59.784 76.071 20.071 57.884 55.013 107.16 56 74 19 55 56 102 2 2 1 2 1 3 24697 7725 3214 7445 18028;18029;18030 20848;20849;20850 20850 3 GLEYLYLNVHDEDRDDQTR Unmodified 2350.0826 0.082567016 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 1 5 0 1 60.686 60.686 4 2.5653E-05 21039 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.203 47.274 79.123 0 46.858 56.457 104.1 0 74 0 46 56 102 0 1 0 1 1 1 0 6681 7726 2646 7446 18031 20851 20851 1 GLFATQLIR Unmodified 1017.5971 0.59711507 1949 Q3TYX3 Smyd5 SET and MYND domain-containing protein 5 yes yes 0 0 0 0 11 0 1 68.343 68.343 2 0.012263 19318 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.547 29.521 0 0 150.4 0 0 118.33 0 0 139 0 0 111 0 0 1 0 0 1 15242 7727 1949 7447 18032 20852 20852 1 GLFDEYGSK Unmodified 1014.4658 0.46582612 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 6.5 0.5 1 1 61.636 61.636 2;3 0.0035629 20049 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.692 37.949 167.59 0 146.18 75.757 112.81 95.919 157 0 139 74 111 93 2 0 2 1 1 1 11938 7728 1324 7448 18033;18034 20853;20854 20854 2 GLFGGGAQSLDREELFGESSSGK Unmodified 2327.103 0.10296811 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 1 7 0 2 69.377 69.377 3;4 1.3151E-09 23675 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.454 44.056 39.347 76.681 27.859 40.441 47.137 28.503 37 75 28 37 46 28 1 2 1 1 1 1 5715 7729 738 7449 18035;18036 20855;20856 20855 2 GLFGGNTR Unmodified 820.41915 0.4191507 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 9 0 1 44.814 44.814 2 0.0054004 10837 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.5 44.266 509.59 457.96 527.67 474.86 568.07 702.27 480 471 535 473 587 674 1 1 1 1 1 1 105900 7730 1478 7450 18037 20857 20857 1 GLFIIDAK Unmodified 875.51165 0.5116541 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 9.14 3.68 1 1 1 1 1 1 1 72.971 72.971 2 0.0012388 24152 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.9 33.779 712.51 1062.6 1314.3 1231.8 914.07 1941.5 670 1051 1301 1183 931 1844 5 6 6 6 5 8 614290 7731 2116 7451 18038;18039;18040;18041;18042;18043;18044 20858;20859;20860;20861;20862;20863;20864;20865;20866 20860 9 GLFIIDDK Unmodified 919.50148 0.50148335 604;610 B1AXW5;B1AXW6;P35700;B1AZS9;O08807 Prdx1;Prdx4 Peroxiredoxin-1;Peroxiredoxin-4 no no 0 0 0 0 9.4 2.06 1 1 1 1 1 72.661 72.661 2 0.0011922 25237 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.16 75.194 2175.5 1671.6 2104.9 1409.2 2290.1 1240 2047 1742 2094 1420 2292 1198 6 6 4 4 6 4 269780 7732 604;610 7452 18045;18046;18047;18048;18049 20867;20868;20869;20870;20871;20872 20867 6 GLFIIDPNGVVK Deamidation (N) 1271.7125 0.71253876 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 1 0 0 9.78 2.35 1 3 2 3 82.064 82.064 2;3 3.0554E-13 28547 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.86 90.777 281.58 281.25 191.27 103.29 247.05 198.3 264 278 186 102 242 189 5 6 4 3 5 4 62851 7733 1422 7453 18050;18051;18052;18053;18054;18055;18056;18057;18058 20873;20874;20875;20876;20877;20878;20879;20880;20881 20878 520 9 GLFIIDPNGVVK Unmodified 1270.7285 0.72852317 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 9.8 0.748 2 2 1 80.667 80.667 2;3 1.3049E-12 25357 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.17 61.692 175.88 122.64 187.71 195.01 176.14 107.46 167 120 185 186 176 102 4 2 3 3 3 2 76268 7734 1422 7453 18059;18060;18061;18062;18063 20882;20883;20884;20885;20886;20887 20886 6 GLFIQQLRPTQNLQPR Unmodified 1908.0694 0.069363975 2341 Q80YE7 Dapk1 Death-associated protein kinase 1 yes yes 0 0 0 1 12 0 1 61.984 61.984 3 0.0077922 14890 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.506 27.667 20.186 0 33.705 18.34 22.212 29.214 19 0 32 19 23 28 1 0 1 1 1 1 4004 7735 2341 7454 18064 20888 20888 1 GLFISIHDK Unmodified 1028.5655 0.56548059 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 9.5 0.5 1 1 58.838 58.838 3 0.0010257 15479 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.213 37.015 59.389 64.099 112.96 67.279 0 148.17 56 65 111 65 0 139 1 1 2 1 0 2 20483 7736 1317 7455 18065;18066 20889;20890 20890 2 GLFITIHDK Unmodified 1042.5811 0.58113065 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 59.568 59.568 3 0.0036194 15854 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.435 34.482 331.13 291.82 366.15 337.06 270.19 331.75 312 301 370 333 284 317 2 2 2 2 2 1 22408 7737 2432 7456 18067;18068 20891;20892 20892 2 GLFPANYIHLK Deamidation (N) 1272.6867 0.68665836 1029 F8VPQ1;Q8CIQ7 Dock3 Dedicator of cytokinesis protein 3 yes no 0 1 0 0 10 0 1 69.262 69.262 3 0.0038714 20166 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.518 30.583 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7738 1029 7457 18069 20893 20893 271 1 GLFPENFTR Unmodified 1079.54 0.53999412 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 8 0.816 1 1 1 64.533 64.533 2 3.3759E-05 20705 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.9 38.769 1074.4 495.03 1156 878.82 773.16 1303 1010 534 1137 873 815 1243 4 3 4 3 3 4 124720 7739 90 7458 18070;18071;18072 20894;20895;20896;20897 20896 4 GLFPFTHVK Unmodified 1044.5757 0.57565135 1571 P47941 Crkl Crk-like protein yes yes 0 0 0 0 9.25 4.82 1 1 1 1 63.046 63.046 3 0.00060807 15259 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.062 43.266 246.23 283.92 289.8 332.24 364.71 212.49 232 287 287 324 365 204 3 4 3 3 2 3 49744 7740 1571 7459 18073;18074;18075;18076 20898;20899;20900;20901 20900 4 GLFSAITRPTPVNSLVSK Unmodified 1886.0625 0.062547262 2523 Q8CCJ3 Ufl1 E3 UFM1-protein ligase 1 yes yes 0 0 0 1 12 0 1 71.679 71.679 3 0.00040073 18434 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.52 40.906 29.817 0 38.184 38.165 0 0 28 0 37 37 0 0 1 0 1 1 0 0 3604.3 7741 2523 7460 18077 20902 20902 1 GLFTGLTPR Unmodified 960.53927 0.53926584 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 12 0 1 63.883 63.883 2 0.020703 15630 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.42 23.5 103.21 64.92 91.926 96.17 0 99.138 97 69 93 93 0 93 1 1 1 1 0 1 16407 7742 2278 7461 18078 20903 20903 1 GLGATLLR Unmodified 799.49159 0.49158736 3075;3112 Q9D6M3;E9PY45;E9PV90;A0A0J9YTY6;Q9DB41 Slc25a22;Slc25a18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 no no 0 0 0 0 9 0 1 55.677 55.677 2 0.0063811 15872 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.11 40.192 859.66 634.09 1054.8 0 861.4 989.19 810 667 1014 0 856 951 1 1 1 0 1 1 95400 7743 3075;3112 7462 18079 20904 20904 1 GLGAVILVHAENGDLIAQEQK Unmodified 2174.1695 0.16953153 2212;1850 P97427;A0A0J9YTX5;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 6 0 2 73.271 73.271 3;4 3.9676E-11 26369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.493 68.187 59.551 74.263 27.348 0 48.116 39.442 56 74 28 0 46 37 2 2 1 0 1 1 14506 7744 1850;2212 7463 18080;18081 20905;20906 20906 2 GLGDCLVK Unmodified 860.44259 0.44258826 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 10 3 1 1 55.567 55.567 2 0.003264 17268 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.08 55.658 1074.1 849.68 531.95 943.31 752.59 885.69 1008 875 539 905 790 851 2 2 1 2 2 2 108770 7745 1607 7464 18082;18083 20907;20908 20907 2 GLGDQSSSR Unmodified 905.42027 0.42027292 213 A0A0R4J1W0;B2RXQ9;D3Z080;Z4YJR7;A0A0R4J1T1;B7ZWM6;B9EKP8;Q3UTJ2;F6ZWT0;F6V513;A0A0R4J1X5 Sorbs2 Sorbin and SH3 domain-containing protein 2 yes no 0 0 0 0 4 0 1 26.997 26.997 2 0.013215 5523 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.349 33.111 20.387 0 0 0 0 34.112 19 0 0 0 0 32 1 0 0 0 0 1 2273.3 7746 213 7465 18084 20909 20909 1 GLGDSRPR Unmodified 856.45151 0.45151346 609 B7ZNS2;B1AZP2 Dlgap4 Disks large-associated protein 4 yes no 0 0 0 1 6 0 1 24.749 24.749 3 0.013597 3971 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.058 28.297 30.044 0 0 0 0 39.442 28 0 0 0 0 37 1 0 0 0 0 1 2326.6 7747 609 7466 18085 20910 20910 1 GLGEDTYSGVTDCAR Unmodified 1599.6835 0.68349983 3112 Q9DB41 Slc25a18 Mitochondrial glutamate carrier 2 yes yes 0 0 0 0 3.5 0.5 1 1 50.461 50.461 2 0.0028677 16495 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.676 50.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7748 3112 7467 18086;18087 20911;20912 20912 2 GLGEISAATEFK Unmodified 1221.6241 0.62411768 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 5.75 0.829 2 1 1 67.478 67.478 2;3 2.3976E-12 23434 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 121.02 86.489 108.76 141.62 306.67 135.54 154.03 188.13 102 139 297 139 149 177 3 2 3 2 3 3 67172 7749 71;74;949;1367 7468 18088;18089;18090;18091 20913;20914;20915;20916;20917;20918 20916 6 GLGFSIAGGVGNQHIPGDNSIYVTK Unmodified 2500.271 0.27103649 407;690;767 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8;S4R2T8 Dlg4;Dlg2;Dlg1 Disks large homolog 4;Disks large homolog 2;Disks large homolog 1 no no 0 0 0 0 8.67 0.471 1 2 71.622 71.622 3;4 4.3975E-20 24106 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.593 64.056 109.28 0 27.541 87.567 83.862 86.085 102 0 28 84 83 83 2 0 1 2 1 1 20145 7750 407;690;767 7469 18092;18093;18094 20919;20920;20921 20919 3 GLGFVLGAYQCICK Unmodified 1584.7793 0.77925489 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 12 0 1 82.357 82.357 3 9.5036E-05 22807 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.085 47.234 0 0 0 39.227 64.567 47.194 0 0 0 37 65 46 0 0 0 1 1 1 5240.6 7751 2499 7470 18095 20922 20922 1 GLGGLILVNK Unmodified 982.61752 0.61751616 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 8.5 4.39 1 1 1 1 72.691 72.691 2 1.6624E-21 18733 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 186.94 126.79 453.49 156.17 474.65 345.48 233.47 529.54 426 162 460 335 236 503 4 2 4 4 2 4 124770 7752 2487 7471 18096;18097;18098;18099 20923;20924;20925;20926;20927 20927 5 GLGILSLK Unmodified 799.51674 0.51673948 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 11.5 0.5 1 1 72.263 72.263 2 0.017936 21090 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.469 16.751 139.49 0 0 71.045 0 187.62 130 0 0 65 0 176 2 0 0 1 0 2 9301.8 7753 828 7472 18100;18101 20928;20929 20928 2 GLGISVLEMSHR Unmodified 1297.6813 0.6812554 2840 Q99K85;Q3U6K9 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 10 2.16 1 1 1 61.069 61.069 3 3.4305E-06 19180 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.45 70.217 69.148 0 159.66 27.065 94.991 115.62 65 0 149 28 93 111 1 0 2 1 1 2 19911 7754 2840 7473 18102;18103;18104 20930;20931;20932 20930 3 GLGLDDALEPR Unmodified 1154.5932 0.5931519 3320 Q9WTM5;A0A1B0GSR4;A0A1B0GRW3;A0A1B0GT54 Ruvbl2 RuvB-like 2 yes no 0 0 0 0 4.5 0.5 1 1 63.04 63.04 2 0.00044007 22352 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.099 55.022 59.198 53.853 104.02 63.126 91.429 85.869 56 56 102 65 93 83 1 1 1 1 1 1 3792.8 7755 3320 7474 18105;18106 20933;20934 20933 2 GLGLDESGLAK Unmodified 1058.5608 0.56078914 1665 P60122 Ruvbl1 RuvB-like 1 yes yes 0 0 0 0 6 0 1 61.233 61.233 2 0.0028618 20634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.282 29.948 39.136 45.36 56.508 26.157 57.374 0 37 46 56 28 56 0 1 1 1 1 1 0 2576.7 7756 1665 7475 18107 20935 20935 1 GLGLSIVGK Unmodified 842.52255 0.52255314 618 D3YUX2;B2RQR2;Q8VBX6;A3KG83;A3KG84;A2ADS6;Q63ZW7 Mpdz;Inadl Multiple PDZ domain protein;InaD-like protein yes no 0 0 0 0 10 0 1 66.954 66.954 2 0.019535 19057 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.465 14.587 39.366 66.506 0 0 0 78.884 37 65 0 0 0 74 1 1 0 0 0 1 3508.1 7757 618 7476 18108 20936 20936 1 GLGMTLSYLFR Unmodified 1256.6587 0.65872905 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 7 6 1 1 89.518 89.518 2 0.00063591 34191 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.838 67.944 58.895 7.3074 28.541 78.749 31.704 43.867 55 7 28 74 33 42 2 1 2 3 3 3 6405.8 7758 2614 7477 18109;18110 20937;20938;20939;20940 20940 4 GLGNYLYNFASAATK Unmodified 1588.7886 0.78855725 3068 Q9D5V6 Syap1 Synapse-associated protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 82.029 82.029 3 6.0353E-17 25538 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 127.71 99.719 0 39.368 89.806 0 126.57 0 0 37 83 0 121 0 0 1 1 0 2 0 18432 7759 3068 7478 18111;18112 20941;20942 20942 2 GLGPLAEAAAAGDGAAAAGAAR Unmodified 1807.9177 0.91767394 1236 O55106 Strn Striatin yes yes 0 0 0 0 5 0 1 65.561 65.561 3 0.032926 23359 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.431 10.05 29.904 27.776 0 0 29.288 0 28 28 0 0 28 0 1 1 0 0 1 0 2749.1 7760 1236 7479 18113 20943 20943 1 GLGPSIDTPPR Unmodified 1108.5877 0.58767259 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 6 0 1 49.898 49.898 2 0.0063699 15297 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.419 45.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7761 965 7480 18114 20944 20944 1 GLGSDLDSSLASLVGNLGISGTTSK Unmodified 2348.2071 0.20709883 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 10.2 2.05 1 1 1 1 2 2 97.328 97.328 3;4 6.4701E-29 34805 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.21 100.62 110.72 129.83 166.86 139.17 51.446 20.254 104 131 163 134 50 19 5 5 5 5 2 1 76576 7762 2129 7481 18115;18116;18117;18118;18119;18120;18121;18122 20945;20946;20947;20948;20949;20950;20951;20952;20953;20954;20955 20948 11 GLGSDLDSSLASLVGNLGISGTTSK Deamidation (N) 2349.1911 0.19111441 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 1 0 0 7 0 1 100.29 100.29 3 1.5518E-22 36544 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.54 83.113 0 0 0 9.837 0 9.594 0 0 0 9 0 9 0 0 0 1 0 1 1021.6 7763 2129 7481 18123 20956 20956 824 1 GLGSTVQEIDLTGVK Unmodified 1515.8144 0.81443765 2731 Q91V64 Isoc1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 0 7 0 1 71.105 71.105 3 0.00060445 24447 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.549 36.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7764 2731 7482 18124 20957 20957 1 GLGTDEDSILNLLTSR Unmodified 1702.8737 0.87374344 1577 P48036;A0A0G2JGQ0 Anxa5 Annexin A5 yes no 0 0 0 0 10.2 2.77 1 1 2 89.21 89.21 2;3 9.468E-34 35228 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.41 119.59 0 78.414 112.38 94.951 0 29.848 0 75 111 93 0 28 0 3 3 3 0 1 26935 7765 1577 7483 18125;18126;18127;18128 20958;20959;20960;20961;20962 20962 5 GLGVEIAK Unmodified 785.4647 0.46470391 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 57.114 57.114 2 0.0062124 17353 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.86 36.198 1100.9 932.33 1017.2 1007.8 1191.7 1323 1036 962 1023 998 1227 1273 4 4 3 4 4 4 178160 7766 1876 7484 18129;18130;18131 20963;20964;20965;20966 20965 4 GLGVHLSFVR Unmodified 1083.6189 0.61891314 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 11 0.816 1 1 1 57.318 57.318 3 0.0013972 13173 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.908 33.359 198.91 108.63 104.51 58.569 77.404 49.036 186 111 102 56 74 46 3 3 2 1 2 1 26161 7767 3453 7485 18132;18133;18134 20967;20968;20969;20970;20971 20971 5 GLHVGTPK Unmodified 807.46029 0.46028724 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 9 0 1 38.603 38.603 3 0.011542 8342 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.895 31.997 69.745 0 0 119.79 81.315 0 65 0 0 111 83 0 1 0 0 1 1 0 8826 7768 3249 7486 18135 20972 20972 1 GLHYDVQR Unmodified 986.49338 0.49337828 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 6 0 1 35.431 35.431 3 0.029679 8565 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.813 27.339 0 38.101 75.798 44.544 64.653 37.597 0 37 74 46 65 37 0 1 1 1 1 1 7084.3 7769 1977 7487 18136 20973 20973 1 GLIAAICAGPTALLAHEVGFGCK Unmodified 2325.1973 0.19734296 2868 Q99LX0;A2A813;A2A815 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 11.7 0.471 1 2 89.233 89.233 3;4 8.0065E-44 25388 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 146.1 130.3 50.118 97.36 34.171 64.958 47.546 56.207 47 93 33 61 48 54 2 4 2 3 2 3 18757 7770 2868 7488 18137;18138;18139 20974;20975;20976;20977;20978 20976 5 GLIDVKPLGVIWGK Unmodified 1493.897 0.89698548 2384 Q8BGR9 Ublcp1 Ubiquitin-like domain-containing CTD phosphatase 1 yes yes 0 0 0 1 12 0 1 82.908 82.908 3 0.002117 23049 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.121 54.834 0 8.2458 79.573 0 0 0 0 9 74 0 0 0 0 1 1 0 0 0 4601.3 7771 2384 7489 18140 20979 20979 1 GLIEPISMIVPR Unmodified 1323.7584 0.75844309 2393 Q8BH44;G3UWZ2 Coro2b Coronin-2B yes no 0 0 0 0 11.5 1.5 1 1 81.439 81.439 2 1.9263E-05 25739 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.88 75.141 97.814 111.62 57.026 0 37.714 98.062 92 112 56 0 37 93 2 2 1 0 1 2 9401.9 7772 2393 7490 18141;18142 20980;20981 20980 2 GLIESALSFGR Unmodified 1148.619 0.61897272 2664 Q8R4C2;D3Z7T9;D6RET4;D3Z4D2;Q8BR30 Rufy2 RUN and FYVE domain-containing protein 2 yes no 0 0 0 0 10 0 1 76.526 76.526 2 0.025602 23303 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.416 17.041 0 38.772 35.626 46.739 75.257 0 0 37 37 46 74 0 0 1 1 1 1 0 3106.9 7773 2664 7491 18143 20982 20982 1 GLIIHGAK Unmodified 807.49667 0.49667274 3100 Q9D9V3;E0CXS3 Echdc1 Ethylmalonyl-CoA decarboxylase yes no 0 0 0 0 10 0 1 43.878 43.878 3 0.0059471 9241 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.138 9.2964 127.44 117.04 122.18 0 178.85 152.66 120 120 120 0 176 148 1 1 1 0 1 1 9778.4 7774 3100 7492 18144 20983 20983 1 GLIPDTPEEKPK Unmodified 1322.7082 0.70818166 3297 Q9QZX7;Z4YMF3;A8Y5D6 Srr Serine racemase yes no 0 0 0 1 7 0.816 1 1 1 53.833 53.833 3 0.023376 17171 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.423 23.986 39.364 0 94.904 225.64 80.575 215.16 37 0 93 213 83 204 1 0 2 3 1 3 24229 7775 3297 7493 18145;18146;18147 20984;20985;20986 20984 3 GLIPECCAVYR Unmodified 1336.6268 0.62677699 997 F6SZ47;P28028 Braf Serine/threonine-protein kinase B-raf yes no 0 0 0 0 7 0 1 58.091 58.091 2 0.012824 18394 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.35 10.553 29.865 0 30.145 0 28.291 29.041 28 0 28 0 28 28 1 0 1 0 1 1 2409.7 7776 997 7494 18148 20987 20987 1 GLLAGNVFDWGAK Unmodified 1346.6983 0.69828568 2342 Q80YV4;F7B6K4 Pank4 Pantothenate kinase 4 yes no 0 0 0 0 11 0 1 84.152 84.152 3 0.0021889 26271 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.343 31.701 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2803.8 7777 2342 7495 18149 20988 20988 1 GLLAYLK Unmodified 776.47963 0.47962569 3065 Q9D517;D3YV65;D3YTN7;D3YUW0;D3Z1M6 Agpat3 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma yes no 0 0 0 0 12 0 1 74.234 74.234 2 0.033821 19409 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.229 27.834 0 59.181 24.083 59.773 0 0 0 56 28 56 0 0 0 1 1 1 0 0 3092.6 7778 3065 7496 18150 20989 20989 1 GLLDFLQGLA Unmodified 1045.5808 0.5807963 968 E9QN99;A0A1L1SUX1;Q8VCR7 Abhd14b Alpha/beta hydrolase domain-containing protein 14B yes no 0 0 0 0 11.5 1.5 1 1 113.37 113.37 2 0.0049006 34451 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.899 50.297 0 4.1516 6.2429 0 0 0 0 4 6 0 0 0 0 1 1 0 0 0 3898.2 7779 968 7497 18151;18152 20990;20991 20990 2 GLLDVTCK Unmodified 904.4688 0.46880301 3325 Q9WTX5;E9PUV4 Skp1;Skp1a S-phase kinase-associated protein 1 yes no 0 0 0 0 9 0 1 60.721 60.721 3 0.0047159 18170 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.854 22.688 0 48.203 44.308 57.743 43.822 47.786 0 46 46 56 46 46 0 1 1 1 1 1 6256.7 7780 3325 7498 18153 20992 20992 1 GLLECCAR Unmodified 977.44227 0.44227069 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 9.5 3.5 1 1 44.39 44.39 2 0.00047349 13396 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.39 83.156 357.23 247.46 345.38 252.7 579.43 516.47 336 249 345 260 582 500 2 1 2 2 2 2 60216 7781 1666 7499 18154;18155 20993;20994 20994 2 GLLEYFK Unmodified 868.46945 0.46945494 2398 Q8BH66;E9PYT3;Q91YH5 Atl1;Atl3 Atlastin-1;Atlastin-3 yes no 0 0 0 0 9.5 0.5 1 1 75.803 75.803 2 0.027191 23115 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.906 44.839 88.062 51.575 123.9 53.823 0 78.884 83 56 120 56 0 74 1 1 1 1 0 1 20252 7782 2398 7500 18156;18157 20995;20996 20996 2 GLLFHPEWVVK Unmodified 1323.7339 0.7339429 2863 Q99LG2;E9PV58 Tnpo2 Transportin-2 yes no 0 0 0 0 10 0 1 74.357 74.357 3 0.00018601 22387 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.108 68.645 25.637 22.743 0 0 46.991 32.771 24 23 0 0 46 32 1 1 0 0 1 1 7106.2 7783 2863 7501 18158 20997 20997 1 GLLFSASK Unmodified 821.4647 0.46470391 2824 Q99J08 Sec14l2 SEC14-like protein 2 yes yes 0 0 0 0 11.5 0.5 1 1 62.828 62.828 2 0.00084854 15274 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 148.38 79.961 252.94 145.22 285.2 247.41 237.59 304.49 238 157 283 246 248 292 1 1 1 1 1 1 66940 7784 2824 7502 18159;18160 20998;20999 20999 2 GLLGALTSTPYSPTQHLER Unmodified 2040.064 0.064003825 2800 Q921M7;A0A2I3BRN5 Fam49b Protein FAM49B yes no 0 0 0 0 10.5 0.5 1 1 68.741 68.741 3 1.3146E-09 19390 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.505 67.583 29.856 37.355 0 20.088 36.094 49.072 28 37 0 19 37 47 1 1 0 1 1 1 4751.9 7785 2800 7503 18161;18162 21000;21001 21001 2 GLLGPETK Unmodified 813.45962 0.45961853 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 0 7 0 1 53.016 53.016 2 0.058744 15938 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.91 16.463 68.713 112.16 78.41 96.976 0 99.138 65 111 83 93 0 93 1 1 1 1 0 1 3905.4 7786 582 7504 18163 21002 21002 1 GLLIDLLIK Unmodified 996.65832 0.65831834 446 Q9QXG2;A2AD03 Chm Rab proteins geranylgeranyltransferase component A 1 yes no 0 0 0 0 12 0 1 95.267 95.267 2 0.011707 27303 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.248 25.4 14.952 13.888 0 0 25.104 0 14 14 0 0 24 0 1 1 0 0 1 0 872 7787 446 7505 18164 21003 21003 1 GLLIEPAANSYLLAER Unmodified 1728.941 0.94103514 1431 P21981 Tgm2 Protein-glutamine gamma-glutamyltransferase 2 yes yes 0 0 0 0 7 0 1 77.882 77.882 3 0.028083 27625 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 34.395 9.178 39.701 0 0 40.441 0 29.848 37 0 0 37 0 28 1 0 0 1 0 1 1363.5 7788 1431 7506 18165 21004 21004 1 GLLLFVDEADAFLR Unmodified 1577.8453 0.84534384 2823 Q925I1 Atad3 ATPase family AAA domain-containing protein 3 yes yes 0 0 0 0 9 0 1 106.17 106.17 3 0.00078183 37067 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.891 43.497 0 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 521.43 7789 2823 7507 18166 21005 21005 1 GLLLYGPPGTGK Unmodified 1171.6601 0.66010926 38 D3Z0U5;D6RGM7;D3Z4J2;A0A0G2JFY0;A0A0A0MQ80;Q9D3R6;Q3UMC0 Katnal2;Spata5 Katanin p60 ATPase-containing subunit A-like 2;Spermatogenesis-associated protein 5 yes no 0 0 0 0 9.71 3.69 1 2 2 1 1 67.479 67.479 2;3 1.0884E-12 16802 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.55 0 147.31 272.79 243.48 713.69 367.27 290.95 138 264 243 691 368 278 3 4 4 6 5 4 354900 7790 38 7508 18167;18168;18169;18170;18171;18172;18173 21006;21007;21008;21009;21010;21011;21012 21011 7 GLLNAIVIR Unmodified 967.61785 0.61785051 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 11 0 1 71.513 71.513 2 0.0067672 20804 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.469 40.25 0 198.97 0 232.81 0 217.46 0 187 0 213 0 204 0 1 0 1 0 1 25859 7791 1489 7509 18174 21013 21013 1 GLLPEELTPLILETQK Unmodified 1793.0186 0.018616762 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 92.125 92.125 3 1.6897E-17 34169 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.98 111.66 92.66 75.574 54.05 98.428 37.384 96.411 88 75 56 93 37 92 3 2 1 2 1 3 28772 7792 2860 7510 18175;18176;18177;18178;18179 21014;21015;21016;21017;21018 21015 5 GLLPIPVAAAK Unmodified 1048.6645 0.66446635 2970 Q9CTY5 Micu3 Calcium uptake protein 3, mitochondrial yes yes 0 0 0 0 11 0 1 73.848 73.848 3 0.0086783 21775 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.353 4.6355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7793 2970 7511 18180 21019 21019 1 GLLPQLLGVAPEK Unmodified 1333.7969 0.79693709 3270 Q9QXX4 Slc25a13 Calcium-binding mitochondrial carrier protein Aralar2 yes yes 0 0 0 0 10 0.816 1 1 1 79.578 79.578 3 7.509E-05 24492 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.522 0 318.79 142.37 161.32 222.07 155.54 155.39 298 148 158 213 158 148 4 3 3 4 4 4 100580 7794 3270 7512 18181;18182;18183 21020;21021;21022;21023;21024;21025 21025 6 GLLQLQWK Unmodified 984.57565 0.57565135 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 8 4.97 1 1 1 74.98 74.98 2;3 0.0015758 19696 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.29 74.726 223.26 88.509 364.64 244.05 0 0 210 93 353 241 0 0 3 1 4 3 0 0 73426 7795 3012 7513 18184;18185;18186 21026;21027;21028;21029 21028 4 GLLQTEPQNNQAK Unmodified 1439.7369 0.73685603 2917 Q9CQ92;G3X9U9;D3YZ32 Fis1 Mitochondrial fission 1 protein yes no 0 0 0 0 7.5 0.5 1 1 48.879 48.879 3 0.00012459 14010 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.46 50.711 49.74 153.37 44.767 127.66 72.617 185.54 47 148 46 120 74 176 2 3 1 2 2 3 12231 7796 2917 7514 18187;18188 21030;21031;21032 21030 3 GLLSSLDHTSIR Unmodified 1297.699 0.69901396 3030 Q9D0M3;A0A2R8VHK1 Cyc1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 0 8 0.816 1 1 1 57.173 57.173 3 4.7876E-15 16515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 134.49 91.463 148.02 135.98 115.99 30.604 102.4 174.03 139 139 111 28 102 166 2 3 1 1 2 3 33610 7797 3030 7515 18189;18190;18191 21033;21034;21035 21035 3 GLLTILK Unmodified 756.51093 0.51092582 3026 Q9D0J4 Arl2 ADP-ribosylation factor-like protein 2 yes yes 0 0 0 0 1 0 1 75.471 75.471 2 0.011479 26032 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.89 9.5244 147.89 86.665 138.49 133.84 0 0 139 93 139 130 0 0 1 1 1 1 0 0 8439.1 7798 3026 7516 18192 21036 21036 1 GLLTLFATT Unmodified 935.53278 0.53278348 534 A2BDX2;O70152 Dpm1 Dolichol-phosphate mannosyltransferase subunit 1 yes no 0 0 0 0 6.5 5.5 1 1 98.417 98.417 2 0.00086307 28140 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.25 91.148 5 15 0 0 0 9 5 15 0 0 0 9 1 2 0 0 0 1 8196.9 7799 534 7517 18193;18194 21037;21038;21039;21040 21040 4 GLLTPLHLAAGNR Unmodified 1331.7674 0.76736829 2703 Q8VE42 Ankrd49 Ankyrin repeat domain-containing protein 49 yes yes 0 0 0 0 11 0 1 59.015 59.015 3 0.0011619 15215 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.49 37.418 0 0 49.772 0 77.404 0 0 0 46 0 74 0 0 0 1 0 1 0 3591.7 7800 2703 7518 18195 21041 21041 1 GLLTYTSWEDALSR Unmodified 1610.794 0.79403656 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 8.71 1.91 2 2 2 1 82.43 82.43 2;3 4.5855E-81 29172 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 222.34 183.2 105.68 104.71 123.62 110.39 103.83 152.44 99 103 123 104 106 145 4 3 4 4 5 5 80281 7801 2736 7519 18196;18197;18198;18199;18200;18201;18202 21042;21043;21044;21045;21046;21047;21048 21045 7 GLLVPDHVITR Unmodified 1218.7085 0.70845643 3338 Q9WUR9;A2ARF6 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 9.25 2.28 1 1 1 1 54.978 54.978 3 8.8218E-05 16235 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.465 59.933 296.85 235.8 223.49 219.69 310.01 154.3 279 241 222 213 307 149 4 3 3 3 3 2 50023 7802 3338 7520 18203;18204;18205;18206 21049;21050;21051;21052 21050 4 GLLVPILLPEK Unmodified 1190.7638 0.76384605 830 E9PVP3;Q5F2B1;F6XX36;Q8R0J2;Q9R0Q9 Mpdu1 Mannose-P-dolichol utilization defect 1 protein yes no 0 0 0 0 11 0 1 88.585 88.585 2 0.0059952 28321 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.711 45.149 0 0 40.034 0 0 39.442 0 0 37 0 0 37 0 0 1 0 0 1 1387.6 7803 830 7521 18207 21053 21053 1 GLNEEVTSKDMLR Oxidation (M);Deamidation (N) 1507.7188 0.7188227 1988 Q3UHY7;Q8BS39 Ccdc32 Uncharacterized protein C15orf57 homolog yes no 0 1 1 1 5 0 1 86.853 86.853 3 0.03093 33200 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.288 11.959 44.63 32.402 45.767 41.224 45.776 43.466 42 34 46 41 47 42 1 1 1 1 1 1 19610 7804 1988 7522 18208 21054 21054 793 161 1 GLNPLTSYVFHVR Unmodified 1501.8041 0.80414773 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 10 0 1 70.088 70.088 3 0.00091554 20568 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.043 42.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7805 1880 7523 18209 21055 21055 1 GLNTIPLFVQLLYSPIENIQR Unmodified 2427.3526 0.35258127 1878 Q02248;F7CRC6 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 8.67 5.44 1 1 1 111.39 111.39 3 6.9479E-14 35054 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.63 103.71 0 0 0 9.837 0 11.198 0 0 0 9 0 11 0 0 0 1 0 3 8682.8 7806 1878 7524 18210;18211;18212 21056;21057;21058;21059;21060 21057 5 GLPDNISSVLNK Unmodified 1255.6772 0.67721588 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 10.5 2.5 1 1 71.369 71.369 2;3 0.00012164 23965 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.226 52.613 59.711 163.02 0 79.121 219.16 0 56 157 0 74 213 0 1 2 0 1 2 0 16439 7807 2783 7525 18213;18214 21061;21062 21061 2 GLPDNISSVLNK Deamidation (N) 1256.6612 0.66123147 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 1 0 0 13 0 1 71.18 71.18 3 0.005848 26587 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.938 30.473 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7808 2783 7525 18215 21063 21063 994 1 GLPFGCSK Unmodified 864.41637 0.41637351 1209;1808;709 O35737;Q8C2Q7;D3Z6Y3;P70333;D3YWT1;D3Z3N4 Hnrnph1;Hnrnph3;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 0 9.5 0.5 1 1 56.493 56.493 2 0.017306 14354 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.229 39.283 228.85 152.68 0 167.89 255.32 229.37 214 158 0 158 259 222 2 2 0 2 2 2 57288 7809 1209;1808;709 7526 18216;18217 21064;21065 21065 2 GLPGSGK Unmodified 614.33878 0.33877512 1390;710 P16330;A0A0J9YVF4;A0A0J9YTQ2;A0A0J9YV14;F6WBP1;A0A0J9YUP5;F8VQG7;Q3V2Q8;Q8JZS6;D3YWX2;E9Q803;F6YTL8;Q9R0I7 Cnp;N4bp2l2;N4bp2;N4bp2l1;Ylpm1 2',3'-cyclic-nucleotide 3'-phosphodiesterase;NEDD4-binding protein 2-like 1;NEDD4-binding protein 2-like 2;YLP motif-containing protein 1 no no 0 0 0 0 8 0.816 1 1 1 40.454 40.454 2 0.038508 9301 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.597 9.3293 657.02 690.77 733.34 506.86 903.26 1134 618 693 740 508 910 1088 3 3 4 3 3 4 337870 7810 1390;710 7527 18218;18219;18220 21066;21067;21068;21069 21067 4 GLPILVELLR Unmodified 1121.7172 0.7172302 636;512 A2AS47;A2AS45;Q68FH0;B7ZNF6;E9QKH8;O35927 Pkp4;Ctnnd2 Plakophilin-4;Catenin delta-2 no no 0 0 0 0 11.5 0.5 1 1 94.458 94.458 2 5.2675E-05 30652 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.41 85.718 55.348 88.836 0 82.856 81.864 47.411 52 87 0 81 81 46 2 2 0 2 2 1 30160 7811 512;636 7528 18221;18222 21070;21071;21072 21070 3 GLPLFPLVK Unmodified 982.62154 0.62153891 986 F6RPJ9;Q9JHR7 Ide Insulin-degrading enzyme yes no 0 0 0 0 6.5 5.5 1 1 84.869 84.869 2 0.00066845 30029 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.57 71.717 89.847 0 47.833 37.842 91.875 76.262 84 0 46 38 92 74 2 0 1 1 2 2 10934 7812 986 7529 18223;18224 21073;21074 21073 2 GLPLLVALLDHPR Unmodified 1412.8504 0.85036964 1862 P98203 Arvcf Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog yes yes 0 0 0 0 12 0 1 87.694 87.694 3 0.0056768 24740 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.423 32.791 30.044 0 0 0 9.414 0 28 0 0 0 9 0 1 0 0 0 1 0 1474.8 7813 1862 7530 18225 21075 21075 1 GLPNVQR Unmodified 782.43989 0.43988615 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 7 0 1 40.021 40.021 2 0.027283 9850 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.415 57.563 108.56 69.921 89.417 145.15 76.821 96.946 102 74 93 139 83 93 1 1 1 1 1 1 12637 7814 1278 7531 18226 21076 21076 1 GLPSNNSLDFLDEEYEVPDLDGTR Unmodified 2694.2297 0.22968476 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 5 0 1 86.529 86.529 3 2.9754E-05 33101 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.158 36.712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7815 2054 7532 18227 21077 21077 1 GLPVLVELLQSETDK Unmodified 1639.9033 0.90325265 1862 P98203 Arvcf Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog yes yes 0 0 0 0 9 0 1 97.638 97.638 3 0.047905 34965 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 34.432 20.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7816 1862 7533 18228 21078 21078 1 GLPWSCSADEVQR Unmodified 1503.6776 0.67762659 1209 O35737;Q8C2Q7 Hnrnph1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 0 8.67 3.09 1 1 1 58.652 58.652 2;3 4.7695E-18 19410 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.01 86.615 9.4447 19.256 19.355 0 0 20.254 9 19 19 0 0 19 1 1 1 0 0 1 2547.2 7817 1209 7534 18229;18230;18231 21079;21080;21081 21079 3 GLPWTLAK Unmodified 884.51199 0.51198846 2631 Q8R0F8 Fahd1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 0 11 0.816 1 1 1 71.079 71.079 2 0.0062124 18150 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.86 81.35 168.32 154.09 246.04 79.593 291.55 297.62 158 158 240 79 292 287 1 2 3 1 3 3 35258 7818 2631 7535 18232;18233;18234 21082;21083;21084 21084 3 GLQAAQK Unmodified 714.40244 0.40243801 875;399 F8WGN6;E9Q0J5;Q9QXL2;A0A2R8VKM5 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A no no 0 0 0 0 8 0 1 37.554 37.554 2 0.017425 8122 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.673 12.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7819 875;399 7536 18235 21085 21085 1 GLQDVLR Unmodified 799.4552 0.45520186 1826 P80317;Q61390 Cct6a;Cct6b T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 0 7 0 1 54.18 54.18 2 0.026927 16515 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.046 28.398 108.22 89.484 129.83 110.4 169.61 0 102 93 130 111 167 0 1 1 1 1 1 0 15041 7820 1826 7537 18236 21086 21086 1 GLQILGQTLK Unmodified 1069.6495 0.64954457 1775;1392 P63141;P16388 Kcna2;Kcna1 Potassium voltage-gated channel subfamily A member 2;Potassium voltage-gated channel subfamily A member 1 no no 0 0 0 0 10.5 0.5 1 1 71.304 71.304 2 1.6034E-05 20540 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.36 68.008 39.269 85.664 0 0 55.922 77.288 37 83 0 0 56 74 1 1 0 0 1 1 4484.1 7821 1775;1392 7538 18237;18238 21087;21088 21088 2 GLQIQAAK Unmodified 827.4865 0.48650199 3286 Q9QZB7 Actr10 Actin-related protein 10 yes yes 0 0 0 0 8 0 1 49.755 49.755 2 0.0084863 13778 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.72 41.758 59.386 64.091 63.681 56.226 63.089 67.49 56 65 65 56 65 65 1 1 1 1 1 1 4012.4 7822 3286 7539 18239 21089 21089 1 GLQLLSK Unmodified 757.46979 0.46978929 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 10.5 0.5 1 1 61.87 61.87 2 0.0058711 16983 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.9 44.488 460.41 433.4 158.53 270.4 451.45 533.98 432 439 167 259 461 513 2 2 1 1 2 2 98903 7823 2057 7540 18240;18241 21090;21091 21090 2 GLQTSQDAR Unmodified 974.47812 0.47812214 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 7 3.16 1 1 1 1 1 29.45 29.45 2 1.6852E-12 6188 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 177.3 111.5 256.49 311.07 204.97 186.36 251.49 316.43 241 315 204 185 259 302 2 4 2 3 4 3 60860 7824 1375 7541 18242;18243;18244;18245;18246 21092;21093;21094;21095;21096 21093 5 GLSAQQQAR Unmodified 957.49919 0.49919194 1455 P26339 Chga Chromogranin-A;Pancreastatin;Beta-granin;WE-14;Catestatin;GE-25;Serpinin-RRG;Serpinin;p-Glu serpinin precursor yes yes 0 0 0 0 6 0 1 28.439 28.439 2 0.02329 5287 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.107 26.227 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 1602.7 7825 1455 7542 18247 21097 21097 1 GLSATVTGGQK Unmodified 1017.5455 0.54547343 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 9 3 1 2 4 1 1 2 1 2 45.901 45.901 2;3 1.4547E-53 14117 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 212.21 142.79 1859.6 2372.6 2182.5 1597.8 3089.2 2854.5 1751 2376 2217 1628 3081 2757 11 12 13 14 11 12 1037700 7826 1666 7543 18248;18249;18250;18251;18252;18253;18254;18255;18256;18257;18258;18259;18260;18261 21098;21099;21100;21101;21102;21103;21104;21105;21106;21107;21108;21109;21110;21111;21112;21113;21114 21114 17 GLSEDFQR Unmodified 950.44576 0.44575938 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 4 0.816 1 1 1 45.537 45.537 2 1.8598E-10 13784 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 174.69 96.945 593.37 622.28 811.37 603.5 674.37 907.11 560 634 812 608 701 869 2 2 3 3 3 3 130990 7827 3355 7544 18262;18263;18264 21115;21116;21117 21117 3 GLSEDTTEETLKESFEGSVR Unmodified 2213.0336 0.033551137 1333 P09405 Ncl Nucleolin yes yes 0 0 0 1 6 4.06 1 2 1 69.161 69.161 3;4 2.895E-10 24950 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.203 73.246 39.147 84.016 223.29 67.788 0 99.138 37 84 214 65 0 93 1 3 4 1 0 2 28996 7828 1333 7545 18265;18266;18267;18268 21118;21119;21120;21121 21119 4 GLSFSEATASTLVK Unmodified 1409.7402 0.74021007 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 7 0 1 69.934 69.934 3 1.2906E-11 23951 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.46 86.5 0 58.141 86.318 0 56.581 58.081 0 56 83 0 56 56 0 1 1 0 1 1 7817.9 7829 3274 7546 18269 21122 21122 1 GLSLLLAK Unmodified 813.53239 0.53238955 461 A2AG50 Map7d2 MAP7 domain-containing protein 2 yes yes 0 0 0 0 6.5 5.5 1 1 74.734 74.734 2 8.4985E-07 25876 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.67 79.6 0 256.42 0 238.27 0 377.36 0 241 0 218 0 354 0 1 0 1 0 1 18010 7830 461 7547 18270;18271 21123;21124 21123 2 GLSLPDIK Unmodified 841.49092 0.49091866 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 9 0 1 66.992 66.992 2 0.043135 21225 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.429 14.434 98.358 0 60.096 0 67.99 0 92 0 56 0 65 0 1 0 1 0 1 0 3718.6 7831 1854 7548 18272 21125 21125 1 GLSLPPACTR Unmodified 1070.5543 0.55426398 1490 P30275;A2ARP5 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 9 2.1 1 2 1 1 50.855 50.855 2;3 5.0933E-06 14089 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.84 53.129 519.69 443.12 629.43 443.89 498 507.57 487 437 616 435 496 481 8 7 7 7 6 6 26434 7832 1490 7549 18273;18274;18275;18276;18277 21126;21127;21128;21129;21130;21131;21132;21133;21134;21135;21136;21137;21138 21127 13 GLSLSAAR Unmodified 773.43955 0.43955179 2727;2019 Q91V14;A0A076FR46;Q6P6P5;Q3V0N8;Q924N4;A2AGJ9;F8WIJ0;Q9JIS8 Slc12a5;Slc12a6;Slc12a4 Solute carrier family 12 member 5;Solute carrier family 12 member 6;Solute carrier family 12 member 4 no no 0 0 0 0 10.5 2.5 1 1 44.753 44.753 2 0.0012406 11454 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.9 70.691 236.06 0 0 414.5 509.39 359.63 220 0 0 388 517 351 1 0 0 1 1 1 23715 7833 2727;2019 7550 18278;18279 21139;21140 21139 2 GLSNLFLSCPIPK Unmodified 1444.7748 0.77482144 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 0 11.3 0.745 1 2 3 80.566 80.566 2;3;4 9.9685E-05 25406 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.42 58.085 178.37 165.82 228.56 445.65 112.55 323.78 167 166 222 417 112 306 3 3 4 5 3 5 99445 7834 2465 7551 18280;18281;18282;18283;18284;18285 21141;21142;21143;21144;21145;21146;21147 21141 7 GLSPAQADSQFLENAK Unmodified 1674.8213 0.82131394 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 6 0.816 1 1 1 64.866 64.866 3 2.552E-17 22961 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.29 109.72 108.36 167.5 172.31 168.95 176.32 76.54 102 167 176 167 176 74 2 3 3 3 2 1 20539 7835 1250 7552 18286;18287;18288 21148;21149;21150 21148 3 GLSQSALPYR Unmodified 1090.5771 0.57710791 1718 P62301;Q921R2;A0A0U1RQ71 Rps13 40S ribosomal protein S13 yes no 0 0 0 0 7.5 0.5 1 1 50.336 50.336 2 8.5688E-05 14678 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.36 71.186 78.858 53.495 46.165 59.43 162.54 0 74 56 46 56 158 0 1 1 1 1 2 0 10917 7836 1718 7553 18289;18290 21151;21152 21151 2 GLSSLLYGSIPK Unmodified 1233.6969 0.69688869 2572 Q8JZU2 Slc25a1 Tricarboxylate transport protein, mitochondrial yes yes 0 0 0 0 12 0 1 78.52 78.52 2 1.2437E-10 21205 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.65 57.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7837 2572 7554 18291 21153 21153 1 GLSSLSLAK Unmodified 874.51238 0.51238239 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875;H3BLF9;H3BJ59;H3BL15 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 0 10 0 1 61.103 61.103 2 0.0021425 16547 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.331 22.204 109.45 0 0 100.17 78.559 106.49 102 0 0 93 83 102 1 0 0 1 1 1 5418.8 7838 1115 7555 18292 21154 21154 1 GLSSNSAVR Acetyl (Protein N-term) 931.47231 0.47230849 2760 Q91WS0 Cisd1 CDGSH iron-sulfur domain-containing protein 1 yes yes 1 0 0 0 1 0 1 35.599 35.599 2 0.034636 9320 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.067 23.14 20.387 0 0 20.411 18.936 0 19 0 0 19 19 0 1 0 0 1 1 0 4358.8 7839 2760 7556 18293 21155 21155 1 GLSSNSAVR Unmodified 889.46174 0.4617438 2760 Q91WS0 Cisd1 CDGSH iron-sulfur domain-containing protein 1 yes yes 0 0 0 0 6 0 1 31.93 31.93 2 0.060406 6839 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.756 19.504 0 24.167 18.255 19.16 27.593 23.731 0 23 19 19 28 23 0 1 1 1 1 1 6067.5 7840 2760 7556 18294 21156 21156 1 GLSSVPEVAEVEPTTK Unmodified 1641.8461 0.8461317 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 5.2 0.748 1 2 2 64.362 64.362 3;4 1.823E-41 22654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 162.46 125.37 200.88 89.965 263.86 234.27 190.19 164.33 195 92 259 232 195 158 4 2 4 4 3 2 73109 7841 1424 7557 18295;18296;18297;18298;18299 21157;21158;21159;21160;21161 21159 5 GLSTLQAVLDSAAEK Unmodified 1501.7988 0.79878758 1104 G5E8H1 Gria2 no no 0 0 0 0 10 2.16 1 1 1 84.971 84.971 3 1.0441E-05 30387 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.69 54.131 89.419 102.77 86.736 0 174.41 58.629 84 102 84 0 168 56 3 3 3 0 4 2 21019 7842 1104 7558 18300;18301;18302 21162;21163;21164;21165;21166 21162 5 GLSTLQAVLDSAAEKK Unmodified 1629.8938 0.8937506 1104 G5E8H1 Gria2 no no 0 0 0 1 10.5 0.5 1 1 79.024 79.024 3;4 4.7749E-05 24071 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.707 65.006 39.468 102.28 0 60.355 45.344 0 37 102 0 56 46 0 1 2 0 1 1 0 13646 7843 1104 7559 18303;18304 21167;21168 21168 2 GLSVLLFNDGTQGR Unmodified 1475.7732 0.77324153 2473 Q8BWW3;Q9CYR6 Pgm3 Phosphoacetylglucosamine mutase yes no 0 0 0 0 9.5 0.5 1 1 76.242 76.242 2 0.00036081 23222 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.094 66.136 0 0 30.296 0 96.648 18.332 0 0 28 0 93 19 0 0 1 0 2 1 5088 7844 2473 7560 18305;18306 21169;21170 21170 2 GLTEQEVETILDK Unmodified 1473.7563 0.75625407 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 7 3.54 1 1 1 1 79.715 79.715 3 9.3401E-10 29800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.264 66.288 0 48.486 27.387 0 0 39.442 0 46 28 0 0 37 0 1 1 0 0 1 4275.7 7845 3245 7561 18307;18308;18309;18310 21171;21172;21173;21174 21171 4 GLTFQEVENFFTFLK Unmodified 1818.9192 0.91923707 2689 Q8VCX5 Micu1 Calcium uptake protein 1, mitochondrial yes yes 0 0 0 0 10 0 1 108.45 108.45 3 5.7126E-05 33968 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.006 57.799 0 0 8.656 0 0 6.396 0 0 8 0 0 6 0 0 1 0 0 1 1088.2 7846 2689 7562 18311 21175 21175 1 GLTGGFGSHSVCGGFR Unmodified 1594.7311 0.73105914 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385 yes no 0 0 0 0 8.5 0.5 1 1 51.042 51.042 3 1.4371E-05 14405 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.315 53.104 0 78.736 0 50.278 63.659 234.84 0 74 0 46 65 222 0 2 0 1 1 2 13099 + 7847 648 7563 18312;18313 21176;21177 21176 2 GLTHPIR Unmodified 792.46062 0.46062159 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 8 0 1 30.079 30.079 2 0.027422 5099 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.401 28.264 29.786 0 43.403 42.451 46.166 0 28 0 42 42 46 0 1 0 1 1 1 0 6491 7848 1347 7564 18314 21178 21178 1 GLTIVGSVLEGTFLDNHPQAQR Unmodified 2351.2234 0.22335801 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 9 0.816 1 1 1 85.032 85.032 3;4 8.2335E-12 27141 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.029 63.972 30.044 20.216 0 48.411 18.936 77.036 28 19 0 47 19 74 1 1 0 2 1 2 12470 7849 2727 7565 18315;18316;18317 21179;21180;21181;21182 21182 4 GLTLLFASGDTGAGCWSVSGR Unmodified 2111.0106 0.010588046 1288 O89023 Tpp1 Tripeptidyl-peptidase 1 yes yes 0 0 0 0 10.5 0.5 1 1 85.584 85.584 3 3.7448E-07 27467 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.032 47.477 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10079 7850 1288 7566 18318;18319 21183;21184;21185 21183 3 GLTLSDDLER Unmodified 1117.5615 0.56151742 1661 P59325;Q8BVV6;A0A1Y7VKT5 Eif5 Eukaryotic translation initiation factor 5 yes no 0 0 0 0 4.5 0.5 1 1 58.25 58.25 2 0.00072591 19898 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.804 21.925 78.707 83.296 46.204 80.223 35.017 49.036 74 84 46 74 37 46 2 2 1 1 1 1 11242 7851 1661 7567 18320;18321 21186;21187 21187 2 GLTPTGMLPSGVLAGGR Unmodified 1582.8501 0.85011165 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 9.5 0.5 1 1 72.356 72.356 2 1.4845E-05 21689 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.368 64.959 29.749 29.792 49.622 24.552 59.824 52.659 28 28 46 23 60 51 1 1 1 1 2 2 14541 7852 811 7568 18322;18323 21188;21189 21189 2 GLTPTGMLPSGVLSGGK Oxidation (M) 1586.8338 0.83379288 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 1 0 9 0 1 67.144 67.144 3 0.00017401 21257 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.943 41.008 58.926 112.46 99.982 74.923 0 108.73 56 111 102 74 0 102 1 1 1 1 0 1 6707.5 7853 1786 7569 18324 21190 21190 142 1 GLTPTGMLPSGVLSGGK Unmodified 1570.8389 0.83887826 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 11.3 1.39 1 1 2 1 2 74.539 74.539 2;3;4 1.8311E-24 22032 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 135.58 102.17 426.47 252.7 269.72 284.95 292.22 267.02 400 260 263 268 292 255 7 5 5 4 5 5 203610 7854 1786 7569 18325;18326;18327;18328;18329;18330;18331 21191;21192;21193;21194;21195;21196;21197;21198 21194 8 GLTPTGTLPLGVLSGGK Unmodified 1566.8981 0.8981077 374 A0A2I3BPC5;P48455 Ppp3cc Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform yes no 0 0 0 0 10 0 1 79.203 79.203 3 0.012379 24668 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.546 16.989 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 2790.1 7855 374 7570 18332 21199 21199 1 GLTSAGR Unmodified 660.35549 0.35548781 3004 Q9CZM2 Rpl15 60S ribosomal protein L15 yes yes 0 0 0 0 6 0 1 28.905 28.905 2 0.060955 5513 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.637 29.217 69.271 0 79.719 0 56.581 58.081 65 0 74 0 56 56 1 0 1 0 1 1 3583.1 7856 3004 7571 18333 21200 21200 1 GLTSVINQK Unmodified 958.54475 0.54474515 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 0 10.5 1.71 1 1 1 1 1 1 55.315 55.315 2;3 3.72E-06 16441 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.91 98.929 704.58 858.2 993.36 980.83 833.53 1002.8 662 858 993 960 842 963 7 8 6 7 4 8 350950 7857 1389 7572 18334;18335;18336;18337;18338;18339 21201;21202;21203;21204;21205;21206;21207;21208;21209;21210 21201 10 GLTTRPGSGLTNIK Unmodified 1413.794 0.79397698 384 A0A2I3BQZ9;P12023 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 1 9 0 1 49.199 49.199 3 0.0034597 12755 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.68 6.1125 48.682 55.185 66.774 0 0 0 46 56 65 0 0 0 1 1 1 0 0 0 6428.6 7858 384 7573 18340 21211 21211 1 GLTVVQAFQELVEPK Unmodified 1656.9087 0.90867238 2789 Q920E5;A0A0G2JEA5;A0A0G2JDJ5;A0A0G2JEB3 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 10 1.87 1 1 1 1 94.684 94.684 3 6.911E-08 33835 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.59 83.381 51.368 48.583 74.511 0 140.31 71.452 48 47 70 0 136 70 3 3 2 0 4 4 24333 7859 2789 7574 18341;18342;18343;18344 21212;21213;21214;21215;21216 21213 5 GLVAEGHR Unmodified 837.4457 0.4456998 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 5 0 1 27.703 27.703 3 0.0049628 5361 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.109 37.551 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 3006.4 7860 2182 7575 18345 21217 21217 1 GLVAVVTGGASGLGLATAK Unmodified 1640.9461 0.94612052 2879 Q99N15;A2AFQ2 Hsd17b10 yes no 0 0 0 0 5.4 5.39 3 2 81.842 81.842 3;4 7.4519E-47 22164 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 158.45 137.5 109.33 291.89 271.45 20.767 200 115.06 103 288 259 19 194 112 3 4 3 1 3 3 70621 7861 2879 7576 18346;18347;18348;18349;18350 21218;21219;21220;21221;21222;21223;21224 21222 7 GLVDKFPLFTAVYK Unmodified 1596.8916 0.89156576 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 1 6.25 5.26 2 1 1 86.391 86.391 3 1.5602E-16 23181 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.06 109.32 346.96 143.35 431.97 141.7 67.469 571.99 326 147 413 138 68 558 6 4 9 6 3 7 75373 7862 1368 7577 18351;18352;18353;18354 21225;21226;21227;21228;21229;21230;21231;21232;21233;21234;21235 21234 11 GLVEDTLR Unmodified 901.4869 0.48689592 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 51.026 51.026 2 0.0094556 16505 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.19 23.414 59.803 0 47.859 36.164 75.743 0 56 0 46 37 74 0 1 0 1 1 1 0 4495.3 7863 3266 7578 18355 21236 21236 1 GLVFDTLYGNLLK Unmodified 1451.8024 0.8024164 942 E9Q9M1;G3X9J6;Q3V1L4 Nt5c2 Cytosolic purine 5'-nucleotidase yes no 0 0 0 0 10.5 0.5 1 1 91.462 91.462 3 8.6472E-05 29780 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.112 14.515 137.91 42.953 49.525 0 58.576 0 129 46 46 0 56 0 2 1 1 0 1 0 15398 7864 942 7579 18356;18357 21237;21238 21237 2 GLVGEIIK Unmodified 827.51165 0.5116541 866;1385 E9PZF0;Q01768;Q5NC79;P15532;Q5NC80 Gm20390;Nme2;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 0 8.8 2.23 2 1 1 1 65.536 65.536 2;3 0.0012388 21173 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.9 24.293 1326.3 1182.7 1350.9 1468.9 1826.9 1723.8 1247 1210 1366 1449 1862 1666 6 6 6 7 6 7 238040 7865 866;1385 7580 18358;18359;18360;18361;18362 21239;21240;21241;21242;21243;21244;21245 21241 7 GLVGEIIKR Unmodified 983.61277 0.61276513 866;1385 E9PZF0;Q01768;Q5NC79;P15532;Q5NC80 Gm20390;Nme2;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 1 9.5 0.5 1 1 55.597 55.597 2 0.0086381 13991 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.458 48.868 0 0 97.766 64.193 54.482 33.333 0 0 93 65 56 32 0 0 2 2 2 1 10210 7866 866;1385 7581 18363;18364 21246;21247 21247 2 GLVGFLWK Unmodified 918.53272 0.5327239 1342 P10493 Nid1 Nidogen-1 yes yes 0 0 0 0 1 0 1 84.8 84.8 2 0.024959 29927 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.311 46.162 50.431 0 0 40.127 16.693 38.966 47 0 0 37 19 37 1 0 0 1 1 1 1104.7 7867 1342 7582 18365 21248 21248 1 GLVHQAICNLNITLPIYAK Unmodified 2137.1718 0.17178014 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R1B7;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4.67 5.19 2 1 86.191 86.191 4 2.6531E-05 22684 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.671 45.043 80.287 35.686 17.579 87.999 88.93 125.38 75 37 19 83 93 120 2 2 1 3 3 3 4983.1 7868 3449;3451 7583 18366;18367;18368 21249;21250;21251 21251 3 GLVLDHGAR Unmodified 936.51411 0.51411372 1826 P80317;Q61390;B1AT05 Cct6a;Cct6b T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 0 6 0 1 37.403 37.403 3 0.011237 9379 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.416 28.68 88.302 72.75 65.52 0 56.581 58.081 83 75 65 0 56 56 1 1 1 0 1 1 6834.3 7869 1826 7584 18369 21252 21252 1 GLVLGIYAK Unmodified 932.5695 0.56950333 2904 Q9CPY7;A0A0G2JEM7 Lap3 Cytosol aminopeptidase yes no 0 0 0 0 12 0.816 1 1 1 70.501 70.501 2 0.00040536 20273 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.54 53.501 127.45 107.34 129.53 90.815 165.58 143.45 120 111 130 93 167 139 1 1 1 1 1 1 35885 7870 2904 7585 18370;18371;18372 21253;21254;21255 21253 3 GLVLGPIHK Unmodified 932.58074 0.58073672 1348 P10852;A0A0U1RP98;A0A0U1RPL8 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 11.4 1.02 1 2 1 1 56.459 56.459 2;3 0.00016098 14064 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.93 39.553 278.13 324.59 183.97 151.93 252.09 118.33 260 325 176 139 241 111 2 4 2 1 2 1 169250 7871 1348 7586 18373;18374;18375;18376;18377 21256;21257;21258;21259;21260 21257 5 GLVLIAFSQYLQK Unmodified 1478.8497 0.84970094 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 13 0 1 95.077 95.077 3 4.1349E-19 38037 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.62 128.55 0 0 30.296 0 85.547 37.001 0 0 28 0 83 37 0 0 1 0 1 1 8078.4 7872 1321 7587 18378 21261 21261 1 GLVMVKPGSIQPHQK Unmodified 1617.9025 0.90248157 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 1 8 4.97 1 1 1 51.246 51.246 4 2.1268E-05 11917 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.776 65.49 148 0 107.48 64.639 0 78.884 148 0 102 65 0 74 1 0 2 2 0 1 50524 7873 2361 7588 18379;18380;18381 21262;21263;21264 21263 3 GLVSSDELAK Unmodified 1017.5342 0.53424004 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.75 0.829 2 1 1 55.448 55.448 2;3 7.3885E-07 17859 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.25 75.571 334.44 442.42 509.13 348.84 219.38 575.78 315 445 511 344 223 546 3 5 5 4 2 5 95844 7874 551 7589 18382;18383;18384;18385 21265;21266;21267;21268;21269 21267 5 GLVTSKPTLATMSVR Unmodified 1559.8705 0.87051274 2305 Q80TM9 Nisch Nischarin yes yes 0 0 0 1 12 0 1 58.046 58.046 3 7.6364E-05 13342 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.789 43.917 0 78.736 0 89.793 49.221 0 0 74 0 83 51 0 0 1 0 1 1 0 7605.8 7875 2305 7590 18386 21270 21270 1 GLVVPVIR Unmodified 851.55927 0.559273 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10.8 1.48 1 1 1 1 62.861 62.861 2 0.00084697 17335 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 148.4 79.009 822.18 1031.8 1600.9 981.15 1380.1 940.48 774 1045 1581 992 1386 906 2 3 4 3 3 3 217800 7876 3049 7591 18387;18388;18389;18390 21271;21272;21273;21274 21272 4 GLVYETSVLDPDEGIR Unmodified 1761.8785 0.87849447 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 72.245 72.245 2;3 1.1401E-67 26356 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 205.46 174.59 168.62 127.83 176.9 164.08 306.51 151.95 158 129 167 158 304 148 4 3 4 4 6 5 232660 7877 3011 7592 18391;18392;18393;18394;18395;18396 21275;21276;21277;21278;21279;21280;21281;21282 21276 8 GLWAGWIPNIQR Unmodified 1409.7568 0.75680361 3070 Q9D6D0 Slc25a27 yes yes 0 0 0 0 12 0 1 83.691 83.691 3 2.1259E-05 23186 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83 63.396 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7878 3070 7593 18397 21283 21283 1 GLWWLVPSLSLE Unmodified 1398.7547 0.75473792 2281 Q7M750 Opalin Opalin yes yes 0 0 0 0 9.25 4.82 1 1 1 1 116.8 116.8 2 0.00010609 45064 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.429 72.527 3.219 5.1986 15.672 8.279 0 2.132 3 5 15 8 0 2 1 1 3 2 0 1 8445 7879 2281 7594 18398;18399;18400;18401 21284;21285;21286;21287;21288;21289 21289 6 GLYDFEPENEGELGFK Unmodified 1842.8312 0.83120992 169 J3QQ44;A0A0R4J0B8;Q62421 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 8.5 4.5 1 1 78.491 78.491 3 3.3797E-06 29345 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.022 62.337 89.486 0 108.5 33.974 0 29.848 84 0 102 37 0 28 2 0 1 1 0 1 7195.2 7880 169 7595 18402;18403 21290;21291 21290 2 GLYDGPVCEVSVTPK Unmodified 1619.7865 0.78650834 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 8.3 3.2 2 2 2 1 3 64.675 64.675 2;3;4 1.2663E-22 22199 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.77 116.93 1040.8 399.45 746.41 1007.3 1351.2 1186.3 975 408 743 976 1369 1148 10 7 9 9 9 10 448460 7881 1158 7596 18404;18405;18406;18407;18408;18409;18410;18411;18412;18413 21292;21293;21294;21295;21296;21297;21298;21299;21300;21301;21302;21303;21304 21294 13 GLYGINEDVFLSVPCILGQNGISDVVK Deamidation (N) 2906.4736 0.47356062 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 1 0 0 10 3.06 1 1 1 3 104.3 104.3 3;4 3.445E-25 37211 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.03 86.609 58.081 8.4552 47.817 4.9623 76.358 0 55 9 45 5 73 0 4 1 3 1 3 0 21601 7882 1315 7597 18414;18415;18416;18417;18418;18419 21305;21306;21307;21308;21309;21310 21306 382 6 GLYGINEDVFLSVPCILGQNGISDVVK Unmodified 2905.4895 0.48954504 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 8 0.816 1 1 1 102.13 102.13 4 0.00018482 36228 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.708 35.833 14.979 14.852 5.8382 15.878 8.9699 19 14 15 6 15 9 19 1 2 1 2 1 1 5180.7 7883 1315 7597 18420;18421;18422 21311;21312;21313 21313 3 GLYPAPLK Unmodified 857.50109 0.50108942 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 10 0.816 1 1 1 59.187 59.187 2 0.0051681 17532 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.54 54.899 260.02 208.27 365.02 264.28 403.06 306.24 245 217 361 264 407 296 2 2 3 2 3 2 42870 7884 2435 7598 18423;18424;18425 21314;21315;21316 21314 3 GLYVYNLQLK Unmodified 1209.6758 0.67575932 1966 Q3UDP0 Wdr41 WD repeat-containing protein 41 yes yes 0 0 0 0 11 0 1 73.014 73.014 2 1.9702E-09 21542 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 159.04 86.111 0 0 19.49 23.977 0 24.518 0 0 19 23 0 23 0 0 1 1 0 1 13655 7885 1966 7599 18426 21317 21317 1 GMATCFAYGQTGSGK Unmodified 1534.6544 0.65444831 810 E0CZ72;P28740;F8VQ42;Q8C0N1 Kif2a;Kif2b Kinesin-like protein;Kinesin-like protein KIF2A;Kinesin-like protein KIF2B yes no 0 0 0 0 9 0 1 55.59 55.59 3 0.016667 15793 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.237 23.298 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7886 810 7600 18427 21318 21318 1 GMDLLLECIASGVPTPDIAWYK Unmodified 2448.2069 0.20690459 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 11.7 1.89 1 2 106.55 106.55 3;4 3.6444E-26 43383 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.21 86.754 0 3 0 9 19 0 0 3 0 9 19 0 0 1 0 1 1 0 4094.7 7887 20;2354 7601 18428;18429;18430 21319;21320;21321;21322 21322 4 GMEDLIPLVNR Unmodified 1255.6595 0.65945733 118;1534 A0A0J9YUN4;A0A0J9YUE9;D6RH60;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 7 0.816 2 2 2 75.386 75.386 2;3 8.6882E-13 27300 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.85 95.773 28.657 116.26 217.85 206.91 163.55 235.72 28 111 213 204 167 223 2 2 4 6 4 4 101500 7888 118;1534 7602 18431;18432;18433;18434;18435;18436 21323;21324;21325;21326;21327;21328;21329;21330 21324 8 GMFTAEDLR Unmodified 1038.4804 0.48043033 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 0 10 3 1 1 57.303 57.303 2 0.00099354 19682 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.09 36.792 275.98 85.013 251.87 173.86 280.96 327.77 259 83 241 176 287 315 3 1 2 2 3 3 22624 7889 3042 7603 18437;18438 21331;21332;21333 21333 3 GMGGAFVLVLYDEIKK Unmodified 1738.9328 0.93277864 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 1 11 1.22 2 1 1 90.408 90.408 3;4 9.8504E-06 28974 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.678 56.978 28 29.792 127.66 73.274 28.291 29.041 28 28 121 74 28 28 1 1 2 2 1 1 43360 7890 1585;1607 7604 18439;18440;18441;18442 21334;21335;21336;21337 21336 4 GMGTALK Unmodified 676.3578 0.357796 1179 O35129 Phb2 Prohibitin-2 yes yes 0 0 0 0 9 0 1 45.486 45.486 2 0.04575 11056 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.674 77.674 128.76 0 0 0 0 148.17 120 0 0 0 0 139 1 0 0 0 0 1 8627.5 7891 1179 7605 18443 21338 21338 1 GMLPDPK Unmodified 756.38401 0.38401075 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 6.5 0.5 1 1 52.479 52.479 2;3 0.020903 16561 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.837 24.816 281.99 133.72 283.17 183.62 207.04 0 265 148 278 187 206 0 1 1 1 1 1 0 19115 7892 1585;1607 7606 18444;18445 21339;21340 21339 2 GMNEALEK Unmodified 890.41677 0.41676744 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 5.5 0.5 1 1 47.586 47.586 2 0.0056106 14902 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.913 37.604 0 58.36 73.244 74.574 103.27 0 0 56 74 74 102 0 0 1 1 1 1 0 11901 7893 1329 7607 18446;18447 21341;21342 21341 2 GMNTLVGYDLVPEPK Oxidation (M) 1647.8178 0.81780846 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 1 0 6 0 1 69.775 69.775 3 0.0013693 24687 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.165 40.292 29.644 36.767 36.004 37.6 36.975 0 28 37 37 37 37 0 1 1 1 1 1 0 4739.1 7894 1360 7608 18448 21343 21343 80 1 GMNTLVGYDLVPEPK Unmodified 1631.8229 0.82289384 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 0 9.17 2.79 1 1 2 2 75.906 75.906 2;3;4 7.1548E-05 26733 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.548 55.864 179.03 358.65 291.1 105.44 224.39 202.57 168 353 283 112 223 195 4 7 3 2 3 4 112260 7895 1360 7608 18449;18450;18451;18452;18453;18454 21344;21345;21346;21347;21348;21349;21350 21345 7 GMNTLVGYDLVPEPK Deamidation (N) 1632.8069 0.80690943 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 1 0 0 6 0 1 77.596 77.596 3 0.016529 28388 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.338 15.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7896 1360 7608 18455 21351 21351 429 1 GMSISDLAGK Unmodified 977.48518 0.48518136 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8 0 1 62.169 62.169 2 2.6083E-05 19589 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.07 77.271 113.83 69.274 106.86 93.807 78.325 0 107 74 107 93 79 0 1 1 1 1 1 0 7916.5 7897 2517 7609 18456 21352 21352 1 GMSLNLEPDNVGVVVFGNDK Unmodified 2103.0307 0.030654786 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7.43 2.44 1 2 2 1 1 84.584 84.584 3;4 7.3714E-11 30801 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.204 91.587 177.47 143.01 323.81 213.66 290.68 417.84 166 140 316 213 297 399 3 3 5 5 5 6 114080 7898 1881 7610 18457;18458;18459;18460;18461;18462;18463 21353;21354;21355;21356;21357;21358;21359 21357 7 GMSQLITMACGSCSNENAFK Unmodified 2204.9323 0.93227942 1702 P61922;Q3TUE8;F7C9G3;F6RN86 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 9 0 1 74.579 74.579 3 3.015E-09 24778 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.448 64.284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7899 1702 7611 18464 21360 21360 1 GMTPAEAEMHFLENAK Unmodified 1774.8018 0.80184082 3345;369 A0A286YDY4;Q9WV92;A7YY80 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 5.5 0.5 1 1 68.763 68.763 3;4 3.9237E-06 24792 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.69 51.961 88.53 0 88.83 36.179 103.08 56.755 83 0 84 37 102 56 2 0 2 1 2 2 8195.2 7900 369;3345 7612 18465;18466 21361;21362 21361 2 GMTPGEAEIHFLENAK Unmodified 1742.8298 0.82977013 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 5.33 0.471 2 1 68.389 68.389 3;4 6.1703E-33 24664 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.43 117.46 20.069 86.001 198.98 127.12 165.56 95.728 19 84 194 130 167 93 1 2 3 3 3 2 19353 7901 526 7613 18467;18468;18469 21363;21364;21365 21364 3 GMVLLCDPPYHFPDDLSYR Unmodified 2294.05 0.05001002 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7 1 1 1 78.698 78.698 3 3.4706E-07 27352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.243 52.988 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 6064.9 7902 1362 7614 18470;18471 21366;21367 21367 2 GMYGIENEVFLSLPCILNAR Unmodified 2295.1392 0.13915938 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 100.31 100.31 3 6.5188E-14 35794 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.99 103.2 23.241 34.836 35.987 67.981 18.789 50.98 22 33 37 64 19 49 3 2 3 4 1 4 31293 7903 1389 7615 18472;18473;18474;18475;18476 21368;21369;21370;21371;21372;21373;21374;21375 21371 8 GNAGDCLANPAVPWGQGVEIER Unmodified 2309.0859 0.085878255 1104 G5E8H1 Gria2 no no 0 0 0 0 5 0 1 70.322 70.322 3 8.3556E-05 25525 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.182 31.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7904 1104 7616 18477 21376 21376 1 GNAMVEEGHFAAEDVK Unmodified 1702.7621 0.7620845 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.33 3.5 2 2 1 1 52.544 52.544 3;4 5.7524E-08 17058 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.3 89.063 248.03 185.86 166.05 157.51 227.25 601.84 232 185 158 148 231 575 3 3 3 4 4 6 105790 7905 551 7617 18478;18479;18480;18481;18482;18483 21377;21378;21379;21380;21381;21382;21383;21384 21384 8 GNDISSGTVLSDYVGSGPPSGTGLHR Unmodified 2529.2096 0.20955844 1806 P70296 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 0 0 0 5.75 0.829 2 1 1 62.323 62.323 3;4 1.2249E-41 21966 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.8 120.88 69.444 77.512 143.93 84.521 129.34 155.14 65 74 140 84 130 149 2 3 5 3 3 5 125920 7906 1806 7618 18484;18485;18486;18487 21385;21386;21387;21388;21389;21390 21386 6 GNDISSGTVLSDYVGSGPPSGTGLHR Deamidation (N) 2530.1936 0.19357403 1806 P70296 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes yes 0 1 0 0 5 0 1 65.427 65.427 3 2.9622E-07 23280 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.688 48.404 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 5731.6 7907 1806 7618 18488 21391 21391 735 1 GNDMQVGTYIEK Unmodified 1353.6235 0.62346575 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 5 0 1 58.399 58.399 3 0.013871 20045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.014 29.123 88.653 0 68.311 35.298 56.955 0 83 0 65 37 56 0 1 0 1 1 1 0 5018.7 7908 2736 7619 18489 21392 21392 1 GNEAYSGNAR Unmodified 1037.4526 0.45263568 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 0 3 0 1 25.008 25.008 2 0.028901 5075 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.347 42.678 20.387 0 0 20.767 0 9.594 19 0 0 19 0 9 1 0 0 1 0 1 1303 7909 48 7620 18490 21393 21393 1 GNEFFCEVDEDYIQDK Unmodified 2006.8204 0.82038724 1789 P67871;G3UZA4;G3UZJ5;G3UZX4;G3UWU5 Csnk2b Casein kinase II subunit beta yes no 0 0 0 0 4 0 1 76.041 76.041 3 0.00048424 28121 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.158 47.782 39.522 0 30.097 0 0 29.848 37 0 28 0 0 28 1 0 1 0 0 1 5654 7910 1789 7621 18491 21394 21394 1 GNEMSEVLR Unmodified 1033.4862 0.48624399 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 6.25 3.96 1 1 1 1 48.32 48.32 2 0.00087446 15571 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.8 77.506 435.59 383.39 339.51 280.61 519.5 605.59 408 391 334 278 523 582 2 3 3 3 3 3 116290 7911 1596 7622 18492;18493;18494;18495 21395;21396;21397;21398 21396 4 GNEPYSGEAR Unmodified 1078.468 0.46795139 574 B1AQY2;Q69ZH9 Arhgap23 Rho GTPase-activating protein 23 yes no 0 0 0 0 3 0 1 29.948 29.948 2 0.012042 7375 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.823 34.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7912 574 7623 18496 21399 21399 1 GNEQESMAR Unmodified 1020.4295 0.42945739 1377 P14576;E9PXC0 Srp54;Srp54c Signal recognition particle 54 kDa protein yes no 0 0 0 0 1 0 1 25.681 25.681 2 0.030026 4759 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.426 33.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7913 1377 7624 18497 21400 21400 1 GNFGGSFAGSFGGAGGHAPGVAR Unmodified 2033.9456 0.94562002 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 7.5 4.03 1 1 1 1 55.718 55.718 3 2.1505E-16 15771 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.11 68.574 29.695 46.923 83.78 58.031 103.76 38.076 28 47 84 56 103 37 1 2 3 1 2 1 15163 7914 3020 7625 18498;18499;18500;18501 21401;21402;21403;21404 21403 4 GNFNYIEFTR Unmodified 1259.5935 0.59348625 1923 Q3THE2;Q6ZWQ9 Myl12b;Myl12a Myosin regulatory light chain 12B yes no 0 0 0 0 9.5 3.5 1 1 64.53 64.53 2 0.011171 23163 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.82 37.295 176.6 100.77 169.6 93.293 172.51 212.54 166 102 167 93 176 204 2 1 2 1 2 2 21871 7915 1923 7626 18502;18503 21405;21406 21406 2 GNFTLPEVAECFDEITYVELQKEEAQK Unmodified 3186.5067 0.50671125 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 1 6 0 2 94.655 94.655 4;5 1.2289E-11 35917 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.423 59.393 14.979 8.566 23.402 33.319 13.929 18.791 14 9 23 32 14 18 1 1 2 2 1 2 4041.2 7916 2714 7627 18504;18505 21407;21408;21409 21408 3 GNGRGNR 2 Deamidation (N) 731.33106 0.33106398 612 D6RFR0;B1B0C9;Q9R0G8 Nrk Nik-related protein kinase yes no 0 2 0 1 2 0 1 35.357 35.357 2 0.028888 9634 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.51 56.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7917 612 7628 18506 21410 21410 174;175 1 GNGSSQAGAAR Deamidation (N) 975.43699 0.43698561 1516 P35282 Rab21 Ras-related protein Rab-21 yes yes 0 1 0 0 2 0 1 20.182 20.182 2 0.048814 3218 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.2 36.905 0 0 15.148 0 14.644 0 0 0 14 0 14 0 0 0 1 0 1 0 991.46 7918 1516 7629 18507 21411 21411 567 1 GNHECASINR Unmodified 1156.5044 0.50435367 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 5.14 3.44 1 2 1 1 1 1 21.918 21.918 2;3 0.00056987 3279 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.883 56.111 0 5.32 19.063 9.2813 59.724 103.33 0 5 18 9 60 98 0 1 2 1 4 5 43711 7919 1710;1711;1770 7630 18508;18509;18510;18511;18512;18513;18514 21412;21413;21414;21415;21416;21417;21418;21419;21420 21419 9 GNIETNHNLPPSHK Unmodified 1556.7696 0.76955314 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 34.672 34.672 4 0.0013596 8553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.724 33.851 59.613 78.026 122.24 58.676 0 118.33 56 74 120 56 0 111 1 1 2 1 0 2 8824.7 7920 1814 7631 18515;18516 21421;21422 21422 2 GNIHAEK Unmodified 767.3926 0.3926016 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 29.531 29.531 3 0.0057593 6311 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.794 60.9 274.57 241.52 356.74 306.71 344.87 299.3 259 250 357 306 353 290 2 2 2 2 2 2 24250 7921 2186 7632 18517;18518 21423;21424 21423 2 GNKNPSLLGILYGK Unmodified 1472.8351 0.83511351 3065 Q9D517 Agpat3 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma yes yes 0 0 0 1 11 0 1 70.371 70.371 3 0.0020792 20276 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.104 51.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7922 3065 7633 18519 21425 21425 1 GNKPDFHLAMPTEQAESFYNSFLEQLR Unmodified 3168.4975 0.49748396 3159 Q9DD18 Dtd1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 0 1 8 0 1 89.471 89.471 4 3.0763E-07 32338 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.329 46.786 0 0 9.738 0 0 9.594 0 0 9 0 0 9 0 0 1 0 0 1 803.98 7923 3159 7634 18520 21426 21426 1 GNKPWISLPR Unmodified 1166.656 0.65602693 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 0 0 1 11 0 1 55.862 55.862 3 0.0071352 13884 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.266 30.059 0 345.8 0 0 752.07 731.14 0 325 0 0 743 706 0 1 0 0 1 1 65704 7924 1730 7635 18521 21427 21427 1 GNLANVIR Unmodified 855.49265 0.49265 1585;1607 P48962;Q3V132;P51881 Slc25a4;Slc25a31;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 9.25 2.28 1 1 1 1 48.353 48.353 2 0.0067012 13939 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.67 41.87 1635.5 1086.7 1019.9 911.48 1056.2 1400.4 1535 1141 992 875 1087 1342 7 7 5 6 6 7 620100 7925 1585;1607 7636 18522;18523;18524;18525 21428;21429;21430;21431;21432;21433;21434 21429 7 GNLAYATSTGGIVNK Unmodified 1464.7573 0.75725712 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 8 4.18 1 1 1 1 57.345 57.345 2;3 1.3952E-15 16600 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.464 69.95 100.25 65.13 47.932 97.268 81.029 38.455 94 65 46 93 83 37 3 2 1 2 2 1 11513 7926 2487 7637 18526;18527;18528;18529 21435;21436;21437;21438 21436 4 GNLCVNLVR Unmodified 1043.5546 0.55459833 1370 P14106 C1qb Complement C1q subcomponent subunit B yes yes 0 0 0 0 11 2 1 1 53.466 53.466 2 0.015407 17858 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.88 27.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7927 1370 7638 18530;18531 21439;21440 21440 2 GNLEVLLFTIQSK Unmodified 1460.8239 0.82388012 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 10.9 1.46 1 3 1 2 90.686 90.686 2;3 8.5566E-12 29595 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.02 93.716 104.2 116.51 123.28 139.35 105.07 116.51 98 116 121 135 108 111 3 4 3 4 3 2 41766 7928 2186;2148 7639 18532;18533;18534;18535;18536;18537;18538 21441;21442;21443;21444;21445;21446;21447;21448;21449 21443 9 GNLGAGNGNLQGPR Deamidation (N) 1324.6484 0.64837537 2602 Q8K310;A0A087WSP7;A0A087WQZ1;A0A087WQ54;A0A087WSF8 Matr3;Gm28285 Matrin-3 yes no 0 1 0 0 4.75 0.433 1 3 42.715 42.715 2;3 4.7298E-16 12623 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.75 111.42 9.5583 67.257 84.253 43.861 159.6 56.765 9 65 83 46 158 56 1 2 2 1 3 1 11771 7929 2602 7640 18539;18540;18541;18542 21450;21451;21452;21453 21453 948 4 GNLPCEDLR Unmodified 1072.4971 0.49714303 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 4 0 1 45.574 45.574 2 0.01248 14160 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.275 30.383 60.088 0 0 0 58.576 0 56 0 0 0 56 0 1 0 0 0 1 0 4450.5 7930 2339 7641 18543 21454 21454 1 GNLQNLER Unmodified 942.48829 0.4882929 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 8 3.56 1 1 1 40.37 40.37 2 0.0057934 11381 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.74 38.7 354.59 285.49 395.52 169.36 273.79 386.61 334 297 390 176 278 370 3 3 3 2 2 3 61610 7931 3376 7642 18544;18545;18546 21455;21456;21457 21455 3 GNNTTSLLSQSVAK Unmodified 1418.7365 0.73652168 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 10.2 2.77 1 1 2 55.443 55.443 2;3 1.0311E-30 16600 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 142.77 84.025 217.06 238.98 168.24 0 227.64 163.6 204 241 167 0 223 158 2 3 2 0 2 1 32711 7932 3117 7643 18547;18548;18549;18550 21458;21459;21460;21461 21459 4 GNNTTSLLSQSVAK Deamidation (N) 1419.7205 0.72053726 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 1 0 0 7 0 1 61.694 61.694 3 0.0060844 20059 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.325 13.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7933 3117 7643 18551 21462 21462 1084 1 GNPDDSFLEDEGEDRNGVTLTEK Deamidation (N) 2537.1041 0.1041499 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 1 0 1 2 0 1 63.399 63.399 4 0.00025181 22420 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.055 41.867 0 0 29.954 7.6846 19.521 0 0 0 28 9 19 0 0 0 1 1 1 0 1923.6 7934 1386 7644 18552 21463 21463 454 1 GNPEPIFSWTK Unmodified 1274.6295 0.62953741 1803 P70232;A0A0N4SUL1 Chl1 Neural cell adhesion molecule L1-like protein;Processed neural cell adhesion molecule L1-like protein yes no 0 0 0 0 7 0 1 70.982 70.982 2 0.04043 24396 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.268 27.839 0 29.484 18.4 8.7404 0 0 0 28 19 9 0 0 0 1 1 1 0 0 1262 7935 1803 7645 18553 21464 21464 1 GNPEPSVHCAR Unmodified 1222.5513 0.55130386 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 3.5 0.5 1 1 26.173 26.173 3 0.00044712 5652 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.09 68.514 39.701 0 20.198 8.0893 58.204 0 37 0 19 9 56 0 1 0 1 1 2 0 7452.9 7936 2077 7646 18554;18555 21465;21466 21465 2 GNPSGIQPDLLISLTAPK Unmodified 1820.0044 0.0043636815 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 0 9 1.91 1 2 2 1 82.716 82.716 3;4 3.679E-07 29291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.495 68.702 29.319 173.28 250.97 242.2 108.14 225.77 28 167 250 232 111 213 1 4 6 4 2 6 45292 7937 2617 7647 18556;18557;18558;18559;18560;18561 21467;21468;21469;21470;21471;21472;21473 21468 7 GNPSVAGAR Unmodified 827.42496 0.42496436 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 0 5 1 1 1 26.895 26.895 2 0.0013993 4726 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.55 64.224 59.524 78.506 28.262 20.767 37.384 58.629 56 78 28 19 37 56 2 2 1 1 1 2 5192.4 7938 1901 7648 18562;18563 21474;21475 21475 2 GNPTVEVDLYTAK Unmodified 1405.7089 0.70890994 1398;1399 P17182;B0QZL1;B1ARR7;A0A0N4SUI6;B1ARR6;A0A0N4SUW8;P17183;A0A0N4SUX5;D3Z6E4;D3Z2S4;D3YVD3 Eno1;Eno2 Alpha-enolase;Enolase;Gamma-enolase no no 0 0 0 0 7 3.26 1 5 1 2 1 1 1 1 63.026 63.026 2;3;4 6.5033E-22 20612 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 161.23 123.14 1637.8 1500.3 1825.4 1781.8 1600 1639.2 1543 1513 1831 1743 1638 1572 16 11 14 13 10 14 699200 7939 1398;1399 7649 18564;18565;18566;18567;18568;18569;18570;18571;18572;18573;18574;18575;18576 21476;21477;21478;21479;21480;21481;21482;21483;21484;21485;21486;21487;21488;21489;21490;21491;21492;21493;21494;21495 21489 20 GNPVNSTR Unmodified 843.41988 0.41987898 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 6 0 1 25.172 25.172 2 0.016525 4088 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.642 46.537 29.782 17.722 29.083 0 18.721 33.578 28 19 28 0 19 32 1 1 1 0 1 1 1850.4 7940 1999 7650 18577 21496 21496 1 GNPVPQQYVWVK Deamidation (N) 1414.7245 0.72450043 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 1 0 0 7 0 1 65.214 65.214 3 0.049868 21653 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.544 24.764 48.637 55.058 74.533 44.596 65.941 0 46 56 74 46 65 0 1 1 1 1 1 0 3491.6 7941 1152 7651 18578 21497 21497 305 1 GNPVPQQYVWVK Unmodified 1413.7405 0.74048484 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 10 2.16 1 1 1 64.854 64.854 2;3 5.5328E-18 20263 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 148.69 109.54 100.17 152.84 190.51 127.68 122.62 233.15 94 148 185 121 121 222 2 2 2 2 1 3 43162 7942 1152 7651 18579;18580;18581 21498;21499;21500 21499 3 GNQTIDEEYDSIR Unmodified 1538.6849 0.68488004 1985 Q3UHK1 Slc2a13 Proton myo-inositol cotransporter yes yes 0 0 0 0 2 0.816 1 1 1 50.975 50.975 2;3 0.00030831 15338 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 95.273 67.26 0 9.0786 29.751 0 29.288 19 0 9 28 0 28 19 0 1 1 0 1 1 8636.7 7943 1985 7652 18582;18583;18584 21501;21502;21503 21501 3 GNRPVILTYHDIGLNHK Unmodified 1946.0486 0.048628533 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 0 0 0 1 8.5 0.5 1 1 50.814 50.814 5 6.5505E-07 14427 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.86 59.811 117.31 197.34 133.48 210.19 256.34 173.61 111 195 139 204 260 167 1 1 1 2 2 1 17878 7944 2687 7653 18585;18586 21504;21505 21504 2 GNSGLGFSIAGGTDNPHIGDDPSIFITK Unmodified 2786.3511 0.3511373 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;E9PXG2;J3QMR8;F6TPQ6;A0A338P746;J3KMS4 Dlg4 Disks large homolog 4 yes no 0 0 0 0 6.5 0.5 1 1 78.348 78.348 4 7.7095E-23 28652 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.001 73.593 29.856 85.334 107.49 39.772 73.269 106.64 28 83 102 37 74 102 1 2 2 1 2 3 11095 7945 407 7654 18587;18588 21506;21507;21508 21506 3 GNSLAEQR Unmodified 873.43044 0.43044367 2058 Q5SRX1;Q5SXA5;Q5SXA4;F6RBX1;F6ZDJ1 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 4.5 0.5 1 1 27.67 27.67 2 0.012807 5414 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.37 7.9073 49.128 84.999 0 60.506 37.328 39.442 46 83 0 56 37 37 1 2 0 2 1 1 18078 7946 2058 7655 18589;18590 21509;21510;21511 21511 3 GNTAAYLLYAFTR Unmodified 1459.746 0.74596415 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11.5 0.5 1 1 84.555 84.555 2;3 0.021419 23526 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.786 27.11 20.387 0 0 61.208 0 20.254 19 0 0 56 0 19 1 0 0 2 0 1 5803.9 7947 3025 7656 18591;18592 21512;21513 21513 2 GNTEVAR Unmodified 745.37187 0.37186616 2922 Q9CQD4 Chmp1b2 Charged multivesicular body protein 1b-2 yes yes 0 0 0 0 3.5 0.5 1 1 22.031 22.031 2 0.024851 3787 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.33 48.164 29.823 0 37.11 76.272 58.273 47.373 28 0 37 74 60 46 1 0 1 2 1 1 5922.4 7948 2922 7657 18593;18594 21514;21515 21514 2 GNTQIYK Unmodified 822.42357 0.42356738 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8.67 3.09 1 1 1 40.623 40.623 2 0.027395 11121 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.114 44.075 63.862 34.088 165.34 72.984 145.52 172.8 60 37 158 74 148 166 1 1 2 1 2 2 12827 7949 3210 7658 18595;18596;18597 21516;21517;21518 21516 3 GNVCGDSK Unmodified 835.34942 0.34941616 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 0 5 0 1 31.836 31.836 2 0.010724 7229 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.331 51.25 29.545 66.712 27.252 72.301 79.313 0 28 65 32 69 79 0 1 1 1 1 1 0 4666 7950 1729 7659 18598 21519 21519 1 GNVGFVFTK Unmodified 967.51272 0.51271674 1381 P14869;D3YVM5;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 10 0.816 1 1 1 65.195 65.195 3 0.00088122 20421 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.624 57.248 187.93 177.24 70.132 59.492 212.11 280.7 176 176 65 56 213 269 2 2 1 1 2 3 23185 7951 1381 7660 18599;18600;18601 21520;21521;21522 21520 3 GNVIIPYK Unmodified 902.52255 0.52255314 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 9 0.816 1 1 1 59.564 59.564 2 0.012023 18406 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.065 18.242 289.01 208.69 301.02 239.88 0 338.99 272 214 301 231 0 318 2 1 2 1 0 2 27375 7952 2187 7661 18602;18603;18604 21523;21524;21525 21523 3 GNVLSLECIAEGLPTPIIYWIK Unmodified 2485.3291 0.32906864 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 10.2 1.64 2 1 1 110.05 110.05 3;4 9.7929E-16 34085 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.396 70.572 0 0 20.558 12 0 26.924 0 0 19 12 0 26 0 0 1 1 0 3 6473.1 7953 331 7662 18605;18606;18607;18608 21526;21527;21528;21529 21528 4 GNVQLETSEDVGQK Unmodified 1502.7213 0.72126554 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 7 4.32 1 1 1 49.982 49.982 3 2.4735E-11 16701 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.96 92.826 0 106.49 121.77 37.678 83.862 86.085 0 102 120 37 83 83 0 2 2 1 1 1 6985.2 7954 2629 7663 18609;18610;18611 21530;21531;21532 21530 3 GNVQVVIPFLTESYSSSQDPPEK Unmodified 2520.2384 0.23839896 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 8 1 1 1 84.947 84.947 3;4 0.0024372 31042 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.507 28.818 78.833 35.635 122.54 94.882 66.371 135.62 74 37 120 93 65 129 2 1 3 2 1 3 15568 7955 1876 7664 18612;18613 21533;21534;21535;21536 21534 4 GNVVFGEPITASLGIDGTHYWSK Unmodified 2447.2121 0.21212463 836 Q3TT92;E9PWE8;Q62188;D3YUS0;D3Z567 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 8 0.816 1 1 1 81.312 81.312 3;4 5.5455E-07 28604 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.324 45.014 39.564 27.124 0 37 0 0 37 28 0 37 0 0 1 1 0 1 0 0 6369 7956 836 7665 18614;18615;18616 21537;21538;21539 21538 3 GNYGLLDQIQALR Unmodified 1459.7783 0.77832691 462;2191 A2AGI2;Q8BYM5;A2AGI0;A2AGI3;Q69ZK9;F6VE93;B0F2B4 Nlgn3;Nlgn2;Nlgn4l Neuroligin-3;Neuroligin-2;Neuroligin 4-like no no 0 0 0 0 7.5 0.5 1 1 75.061 75.061 2;3 0.00015245 25593 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.548 52.262 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 11812 7957 462;2191 7666 18617;18618 21540;21541 21541 2 GNYLVDVDGNR Unmodified 1220.5786 0.57856447 1702 P61922;Q3TUE8 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 5 0 1 52.893 52.893 3 0.0069369 17272 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.841 30.894 0 0 0 0 57.278 37.808 0 0 0 0 56 37 0 0 0 0 1 1 7605.6 7958 1702 7667 18619 21542 21542 1 GPAAENLEAKPVQAPTVK Unmodified 1818.984 0.98396259 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 1 6 0 1 54.085 54.085 4 0.0043769 17293 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.633 29.785 79.128 54.248 0 89.041 89.212 115.78 74 56 0 83 93 111 1 1 0 1 1 1 3965.3 7959 3285 7668 18620 21543 21543 1 GPAAIQK Unmodified 683.39662 0.39662435 661 CON__P35527 yes yes 0 0 0 0 10 3 1 1 40.641 40.641 2 0.027111 10310 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.591 40.087 118.35 264.77 168.96 219.67 163.43 340.72 111 259 167 213 167 324 1 2 1 2 1 2 12664 + 7960 661 7669 18621;18622 21544;21545 21544 2 GPAGNNDCR Deamidation (N) 960.37194 0.37194251 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 1 0 0 1.67 0.471 1 2 22.03 22.03 2 0.010148 3385 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.07 95.758 65.085 26.828 39.033 29.25 94.071 84.728 61 29 39 28 94 82 3 2 2 1 3 3 7036.3 7961 1130 7670 18623;18624;18625 21546;21547;21548 21546 298 3 GPAGNNDCR Unmodified 959.38793 0.38792693 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 4 0 1 19.98 19.98 2 0.00080644 2884 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 115.49 78.466 29.717 0 55.032 0 46.294 53.045 28 0 51 0 46 51 1 0 1 0 1 1 3483.1 7962 1130 7670 18626 21549 21549 1 GPAPLNLEVPAYEFTSDDVVVVG Unmodified 2387.1897 0.18965785 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 5 0.816 1 1 1 98.73 98.73 3 0.042254 34592 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 28.412 19.589 0 3.192 0 0 11.068 2.0445 0 3 0 0 11 2 0 1 0 0 3 1 4584.3 7963 2958 7671 18627;18628;18629 21550;21551;21552 21550 3 GPAPSPMPQSR Unmodified 1123.5444 0.54442757 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6 0 1 37.884 37.884 2 0.0043067 9681 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.626 43.067 0 29.792 0 30.104 26.577 38.684 0 28 0 28 28 37 0 1 0 1 1 1 2809.8 7964 2186 7672 18630 21553 21553 1 GPASDDPR Unmodified 813.3617 0.3616954 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 1.5 0.5 1 1 24.791 24.791 2 0.0060451 4868 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.61 43.577 69.745 98.952 0 0 0 187.62 65 93 0 0 0 176 1 1 0 0 0 2 28610 7965 1796 7673 18631;18632 21554;21555 21555 2 GPASEPVLTQTSEQAPSSAPR Unmodified 2109.0338 0.033825909 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9 Ptprd Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 0 0 0 0 3.5 0.5 1 1 48.79 48.79 3 3.5275E-12 15679 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.92 86.862 29.93 0 38.795 48.71 18.537 20.254 28 0 38 47 19 19 1 0 2 2 1 1 7537.3 7966 642 7674 18633;18634 21556;21557 21557 2 GPATVEDLPSAFEEK Unmodified 1588.7621 0.76206772 3357 Q9Z0G0 Gipc1 PDZ domain-containing protein GIPC1 yes yes 0 0 0 0 5 1 1 1 69.88 69.88 3 0.0010022 25276 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.66 32.782 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2451.3 7967 3357 7675 18635;18636 21558;21559 21558 2 GPAVGIDLGTTYSCVGVFQHGK Unmodified 2262.1103 0.11030209 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.2 3.97 2 1 1 1 2 1 1 1 70.547 70.547 3;4 1.1476E-28 23603 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.78 113.13 340.58 186.06 553.14 164.1 557.69 407.81 320 186 528 166 551 394 5 5 7 2 7 8 129730 7968 1762 7676 18637;18638;18639;18640;18641;18642;18643;18644;18645;18646 21560;21561;21562;21563;21564;21565;21566;21567;21568;21569 21563 10 GPAVLPEPLKPQAAFPQQPSLPTPAQK Unmodified 2806.5382 0.53815021 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F7CD11;F6XIX0 Synj1 Synaptojanin-1 yes no 0 0 0 1 8.67 0.471 1 2 72.946 72.946 4;5 4.0598E-17 24013 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.053 68.546 206.97 146.81 76.028 323.33 292.51 96.075 194 148 74 305 297 93 3 2 1 3 3 1 42360 7969 927 7677 18647;18648;18649 21570;21571;21572 21572 3 GPAVTEK Unmodified 700.37555 0.37555455 1257 O70481 Ubr1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 0 4 0 1 31.646 31.646 3 0.063569 7638 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.692 9.8679 69.745 0 0 79.703 62.706 47.247 65 0 0 74 65 46 1 0 0 1 1 1 4330.2 7970 1257 7678 18650 21573 21573 1 GPDDLQSLVLLLDSSR Unmodified 1726.9101 0.91012895 2239 Q6PDS3 Sarm1 Sterile alpha and TIR motif-containing protein 1 yes yes 0 0 0 0 7 0 1 95.657 95.657 3 0.0098532 35258 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.088 20.425 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1030 7971 2239 7679 18651 21574 21574 1 GPDGGVMQPVR Unmodified 1111.5444 0.54442757 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 7 3.54 1 1 1 1 43.006 43.006 2 0.0016348 12615 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.29 52.82 108.33 185.52 176.5 248.17 251.17 327.56 102 184 176 241 260 314 1 3 2 4 3 3 47131 7972 1223 7680 18652;18653;18654;18655 21575;21576;21577;21578 21576 4 GPDGLTALEATDNQAIK Unmodified 1712.8581 0.85809337 1738 P62774 Mtpn Myotrophin yes yes 0 0 0 0 4.75 0.829 2 1 1 66.342 66.342 3;4 5.2842E-39 23715 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 156.72 129.07 255.37 192.1 199.18 85.58 130.73 205.78 240 195 195 84 130 194 5 3 4 2 3 3 77557 7973 1738 7681 18656;18657;18658;18659 21579;21580;21581;21582;21583 21580 5 GPDGQSVPQAEDR Unmodified 1354.6113 0.61132116 8 A0A087WNU5 Ank3 yes yes 0 0 0 0 2 0 1 35.178 35.178 3 0.039927 9544 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 36.944 23.517 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1457.7 7974 8 7682 18660 21584 21584 1 GPDPEPTQPGTVK Unmodified 1321.6514 0.65139506 74;1367 A0A0A6YY91;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 3.5 0.5 1 1 44.045 44.045 2;3 0.00012287 13440 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.39 64.969 78.592 35.435 106.12 38.75 58.576 39.442 74 37 102 37 56 37 2 1 2 1 1 1 10664 7975 74;1367 7683 18661;18662 21585;21586 21586 2 GPDWILGEMK Unmodified 1144.5587 0.55868065 680 D3YUM1;Q91YT0;D6RG60 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 77.322 77.322 2 0.00018851 26729 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.044 68.697 39.315 75.513 34.192 118.45 44.533 0 37 74 37 111 46 0 1 2 1 2 1 0 9028.9 7976 680 7684 18663;18664 21587;21588 21588 2 GPEDEIGDPLA Unmodified 1111.5033 0.50333384 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 1 0 1 68.146 68.146 2 0.0026856 22979 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.923 61.146 50.094 47.733 16.255 28.932 37.373 40.508 47 47 19 28 37 38 2 1 1 1 1 1 11623 7977 175 7685 18665 21589;21590 21589 2 GPEGERPAR Unmodified 967.48354 0.48354187 1785 P63325;A0A338P7K4;Q3UW83 Rps10 40S ribosomal protein S10 yes no 0 0 0 1 2 1 1 1 20.339 20.339 3 0.0017715 3143 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.098 50.229 127.05 140.1 208.63 117.18 151.7 207.81 120 143 206 120 157 199 1 2 2 1 2 2 24422 7978 1785 7686 18666;18667 21591;21592 21592 2 GPELLTMWFGESEANVR Oxidation (M) 1950.9146 0.9145624 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 1 0 10.5 2.5 1 1 89.081 89.081 3 1.1482E-05 35173 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.236 56.428 29.559 26.815 67.834 0 0 0 28 28 65 0 0 0 1 1 2 0 0 0 17139 7979 1875 7687 18668;18669 21593;21594 21594 156 2 GPELSAQEQMEGMLCR Unmodified 1834.8012 0.8011889 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0 1 66.818 66.818 3 0.010196 23926 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.962 27.982 30.044 0 0 0 38.702 0 28 0 0 0 37 0 1 0 0 0 1 0 1797.7 7980 2186 7688 18670 21595 21595 1 GPEPDTIIGYSGEDLPSAPR Unmodified 2069.9906 0.99056411 2354 Q810U3 Nfasc Neurofascin yes yes 0 0 0 0 3.5 0.5 1 1 68.119 68.119 3 1.7128E-22 24451 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.14 108.93 20.33 29.792 9.6355 40.441 0 39.442 19 28 9 37 0 37 1 1 1 1 0 1 22066 7981 2354 7689 18671;18672 21596;21597 21597 2 GPETSSLDLVDIQTQLEK Unmodified 1972.0001 6.61646E-05 721 D3YYH0 Pex5l yes yes 0 0 0 0 5 0 1 78.812 78.812 3 5.6665E-05 29596 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.821 45.698 39.701 0 0 40.441 0 20.254 37 0 0 37 0 19 1 0 0 1 0 1 2365 7982 721 7690 18673 21598 21598 1 GPEYDAFLDEFMEAASSK Unmodified 2005.8615 0.86152377 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 7.75 3.11 1 1 1 1 96.936 96.936 3 8.2385E-06 35662 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.477 26.523 0 0 14.944 4.5743 0 9.594 0 0 14 5 0 9 0 0 1 1 0 1 1663.3 7983 1317 7691 18674;18675;18676;18677 21599;21600;21601;21602 21599 4 GPFLLGIK Unmodified 843.52182 0.52182486 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 6.5 5.5 1 1 74.783 74.783 2 0.0095584 19690 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.919 74.921 178.41 262.64 54.449 246.09 167.55 39.442 167 259 56 231 167 37 2 4 1 4 2 1 37057 7984 1472 7692 18678;18679 21603;21604;21605;21606 21606 4 GPFLVALGK Unmodified 900.54329 0.54328858 91 A0A0G2JGZ5;A0A0G2JEJ0;D9J2Z9;D9J300;D9J301;D9J302;Q8CI51 Pdlim5 PDZ and LIM domain protein 5 yes no 0 0 0 0 6.5 5.5 1 1 74.884 74.884 2 1.2078E-05 25788 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 151.17 105.16 227.84 194.71 82.506 235.13 248.82 328.69 213 194 84 222 259 315 2 2 2 2 3 3 15491 7985 91 7693 18680;18681 21607;21608;21609 21607 3 GPFLVSAPLSTIINWER Unmodified 1899.0254 0.025433475 576 F7C528;E9QAS4;E9QAS5;E9Q614;B1AR17;Q6PDQ2 Chd3;Chd4 Chromodomain-helicase-DNA-binding protein 4 yes no 0 0 0 0 12 0 1 95.757 95.757 3 0.00073386 27469 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.376 29.995 0 0 9.738 0 14.644 0 0 0 9 0 14 0 0 0 1 0 1 0 969.62 7986 576 7694 18682 21610 21610 1 GPFPIIV Unmodified 741.44251 0.44251191 654 CON__P02666 yes yes 0 0 0 0 13 0 1 89.555 89.555 2 0.043802 35440 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.191 71.281 9.4821 0 29.401 19.015 0 20.254 9 0 28 19 0 19 1 0 1 1 0 1 3216.1 + 7987 654 7695 18683 21611 21611 1 GPFPPVWNPITYLDNNNLWR Unmodified 2412.2015 0.20150036 2467 Q8BW75;E9Q3X6 Maob Amine oxidase [flavin-containing] B yes no 0 0 0 0 10.8 0.829 2 1 1 102.92 102.92 3 7.048E-09 28866 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.505 68.686 12.753 5.7798 15.819 12 0 15.396 12 6 15 12 0 15 2 1 2 2 0 2 14115 7988 2467 7696 18684;18685;18686;18687 21612;21613;21614;21615;21616 21616 5 GPFTDVVTTNLK Unmodified 1290.682 0.68196691 3343;2399 Q9WV55;Q8BH80;Q9QY76 Vapa;Vapb Vesicle-associated membrane protein-associated protein A;Vesicle-associated membrane protein-associated protein B no no 0 0 0 0 9.25 2.28 1 1 1 1 69.401 69.401 2;3 1.8769E-07 23077 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.03 71.758 69.229 111.6 223.42 0 190.95 104.95 65 112 213 0 186 102 1 3 4 0 3 2 17072 7989 3343;2399 7697 18688;18689;18690;18691 21617;21618;21619;21620 21618 4 GPGAASALDDSR Unmodified 1115.5207 0.52071524 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 4 0 1 39.007 39.007 2 3.4909E-08 11090 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.39 83.707 88.238 140.51 85.655 90.719 0 108.73 83 139 83 83 0 102 1 2 1 1 0 2 4429.1 7990 1400 7698 18692 21621;21622 21621 2 GPGAGGLSSSPSEILQELGK Unmodified 1882.9636 0.96362108 789 D3Z7P3 Gls Glutaminase kidney isoform, mitochondrial yes yes 0 0 0 0 7 0 1 81.08 81.08 3 0.0049975 29184 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.983 12.34 20.387 0 0 0 27.631 48.248 19 0 0 0 28 46 1 0 0 0 1 1 2381.6 7991 789 7699 18693 21623 21623 1 GPGASVHDR Unmodified 894.43078 0.43077802 1970 Q3UF95;Q9Z1R2;G3UYQ2;A0A1B0GX81;G3UZT6;G3UXT8;G3UYZ0;G3V013 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 4 0 1 20.588 20.588 3 0.0023963 3079 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.607 49.678 0 0 30.296 0 27.631 48.248 0 0 28 0 28 46 0 0 1 0 1 1 2989.4 7992 1970 7700 18694 21624 21624 1 GPGATQSGPR Unmodified 926.45699 0.45699277 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 7 3.54 1 1 1 1 23.862 23.862 2 6.2815E-05 3867 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.08 61.589 37.442 33.433 55.689 75.377 0 93.808 35 32 56 72 0 88 2 1 2 3 0 2 14678 7993 1275 7701 18695;18696;18697;18698 21625;21626;21627;21628 21626 4 GPGGQQPPQHR Unmodified 1157.569 0.56900284 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 8 3.56 1 1 1 20.77 20.77 3 1.1688E-05 2983 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.044 62.218 20.249 25.958 20.403 33.229 0 33.046 19 26 21 31 0 31 1 3 2 2 0 2 6149.6 7994 2255 7702 18699;18700;18701 21629;21630;21631 21629 3 GPGIGLLGISK Unmodified 1010.6124 0.61243078 3282;1240 O55137;Q9QYR9 Acot1;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 10.5 0.5 1 1 71.366 71.366 2 0.0011146 20600 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.681 63.758 267.8 89.577 0 140.1 105.71 233.64 250 93 0 130 111 222 2 1 0 1 1 2 35825 7995 1240;3282 7703 18702;18703 21632;21633 21633 2 GPGLGSTQGQTIALPAQGLIEFR Unmodified 2310.2332 0.23319442 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 9.33 2.75 1 1 1 1 2 80.993 80.993 3;4 1.503E-48 31221 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.63 97.482 129.45 148.17 61.237 131.76 84.636 88.479 121 144 65 125 84 84 4 5 3 4 3 3 81571 7996 1542 7704 18704;18705;18706;18707;18708;18709 21634;21635;21636;21637;21638;21639;21640;21641 21641 8 GPGPGGPGGAGGAR Unmodified 1063.5159 0.51590463 1674 P60761 Nrgn Neurogranin;NEUG(55-78) yes yes 0 0 0 0 7 3.54 1 1 1 1 28.022 28.022 2 7.5051E-48 5572 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 188.98 149.83 132.5 240.02 128.39 192.16 141.89 222.36 125 236 135 185 148 212 2 4 2 3 3 3 26823 7997 1674 7705 18710;18711;18712;18713 21642;21643;21644;21645 21643 4 GPGQDPQAALGALGK Unmodified 1378.7205 0.72047768 3383 Q9Z1Q9;G3UY93;G3UZ22 Vars Valine--tRNA ligase yes no 0 0 0 0 7 0 1 63.079 63.079 3 4.3365E-05 20688 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.344 45.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7998 3383 7706 18714 21646 21646 1 GPGSEEAATAALPAR Unmodified 1396.6947 0.69465686 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 4 0 1 45.856 45.856 3 0.0087828 14299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.958 21.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7999 3249 7707 18715 21647 21647 1 GPGTSFEFALAIVEALVGK Unmodified 1905.0248 0.024764773 2868 Q99LX0 Park7 Protein deglycase DJ-1 yes yes 0 0 0 0 12 0 1 125.14 125.14 3 1.1333E-08 32964 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.39 86.559 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 3644.6 8000 2868 7708 18716 21648 21648 1 GPGYPQAEALLAEAMLK Unmodified 1757.9022 0.9022068 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 8.2 2.48 1 2 1 1 89.415 89.415 3;4 8.7384E-07 35302 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 79.879 213.02 153.46 338.78 213.66 128.92 466.47 200 157 333 213 130 440 4 3 4 3 2 4 81462 8001 491 7709 18717;18718;18719;18720;18721 21649;21650;21651;21652;21653;21654;21655;21656 21656 8 GPHGGPSQPTGPR Unmodified 1243.6058 0.60578227 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 5 0.816 1 1 1 24.468 24.468 3 9.9123E-19 4494 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.85 77.881 14.952 28.784 0 19.054 32.96 34.792 14 28 0 18 33 33 1 3 0 2 2 2 8202.7 8002 1275 7710 18722;18723;18724 21657;21658;21659;21660 21657 4 GPIEQVYQEIAILK Unmodified 1599.8872 0.88720866 2484 Q8C078;A0A0G2JET2 Camkk2 Calcium/calmodulin-dependent protein kinase kinase 2 yes no 0 0 0 0 7.5 0.5 1 1 92.846 92.846 3 0.00033277 34379 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.93 45.397 9.6335 4.6704 0 40.441 0 50.102 9 5 0 37 0 47 1 1 0 1 0 1 1730.9 8003 2484 7711 18725;18726 21661;21662 21661 2 GPILMELQTYR Unmodified 1319.6908 0.69075746 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 9.75 1.92 1 2 1 72.254 72.254 2;3 3.4474E-05 23733 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.82 58.983 168.89 156.11 86.351 38.261 248.49 134.53 158 158 83 37 241 130 2 3 2 1 3 3 59309 8004 1520 7712 18727;18728;18729;18730 21663;21664;21665;21666 21665 4 GPITYSLAGTYICEATNPIGTR Unmodified 2354.1576 0.15764621 3230 Q9JKF6;A0A1L1SQP1 Pvrl1 Nectin-1 yes no 0 0 0 0 8 0 1 80.264 80.264 3 1.5903E-07 28192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.087 58.205 0 19.729 29.112 0 0 29.848 0 19 28 0 0 28 0 1 1 0 0 1 2042.1 8005 3230 7713 18731 21667 21667 1 GPLGPNWK Unmodified 867.46029 0.46028724 1148;1615 J3QQ30;J3QPW1;P53810;Q8JZZ5;P53811 Pitpna;Pitpnb Phosphatidylinositol transfer protein alpha isoform;Phosphatidylinositol transfer protein beta isoform no no 0 0 0 0 10.7 1.7 1 1 1 57.171 57.171 2 0.0029088 16655 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.86 83.383 1075 413.7 752.85 950.3 668.59 1039.5 1008 424 737 922 675 993 3 2 2 3 2 3 89129 8006 1148;1615 7714 18732;18733;18734 21668;21669;21670 21668 3 GPLLEEQALSK Unmodified 1183.6449 0.64485312 2321 Q80VD1 Fam98b Protein FAM98B yes yes 0 0 0 0 6 0 1 62.405 62.405 3 0.00013803 21238 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.741 67.764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8007 2321 7715 18735 21671 21671 1 GPLMMYISK Unmodified 1038.5242 0.5242094 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 11.5 0.5 1 1 73.47 73.47 2 0.0010042 19033 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.66 55.937 69.372 160.96 84.592 61.208 0 0 65 157 83 56 0 0 1 2 1 1 0 0 32333 8008 1652 7716 18736;18737 21672;21673 21673 2 GPLNWYR Unmodified 904.45554 0.45553621 1511 P34914;A8JYK8 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 0 0 0 10 0 1 58.49 58.49 2 0.04688 15257 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.374 8.9757 59.376 54.35 73.573 65.875 41.726 97.947 56 56 74 65 46 93 1 1 1 1 1 1 10476 8009 1511 7717 18738 21674 21674 1 GPLPAAPPTAPER Unmodified 1272.6826 0.68263561 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 9 4 1 1 49.221 49.221 2 0.00041989 15789 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.611 84.33 0 77.961 46.335 97.925 109.3 67.226 0 74 46 94 111 65 0 2 1 2 2 1 10568 8010 2886 7718 18739;18740 21675;21676 21676 2 GPLQSVQVFGR Unmodified 1186.6459 0.64585618 1372 P14131 Rps16 40S ribosomal protein S16 yes yes 0 0 0 0 9.5 0.5 1 1 63.227 63.227 2 0.0038063 19402 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.786 36.945 78.777 23.049 85.581 54.876 65.469 93 74 28 83 56 65 93 1 1 1 1 1 1 22244 8011 1372 7719 18741;18742 21677;21678 21677 2 GPLTISAQESVK Unmodified 1228.6663 0.66631685 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9;Q6J1S9 Itsn1 Intersectin-1 yes no 0 0 0 0 7 0 1 57.141 57.141 3 0.00021692 17912 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.29 49.373 60.088 0 0 0 97.278 0 56 0 0 0 93 0 1 0 0 0 1 0 3295.3 8012 876 7720 18743 21679 21679 1 GPLVFGEPIAASLGTDGTHYWSK Unmodified 2402.1907 0.1906609 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.43 1.18 2 2 1 2 82.1 82.1 3;4 1.6429E-15 28236 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.357 55.674 119.95 0 38.046 117.52 195.74 37.831 112 0 37 112 196 37 3 0 2 3 4 1 30454 8013 1850;2212 7721 18744;18745;18746;18747;18748;18749;18750 21680;21681;21682;21683;21684;21685;21686 21684 7 GPLVFLEQALIQYALR Unmodified 1830.0404 0.040355257 1460 Q8C483;P26638 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 13 0 1 117.42 117.42 3 0.00051919 45121 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.328 38.963 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 872.64 8014 1460 7722 18751 21687 21687 1 GPNGASAGVAAQHSQCFAAWYGHCPGLK Deamidation (N) 2899.2919 0.29186506 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 1 0 0 12 0 1 59.689 59.689 4 1.1388E-12 14056 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.444 57.479 24.679 0 0 40.032 21.728 14.304 23 0 0 37 23 14 1 0 0 1 1 1 4040.1 8015 3016 7723 18752 21688 21688 1049 1 GPPGPESQSR Unmodified 1010.4781 0.47812215 631 Q91W39;B7ZC24 Ncoa5 Nuclear receptor coactivator 5 yes no 0 0 0 0 3.5 0.5 1 1 27.965 27.965 2 0.0015853 5929 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.886 63.097 0 19.751 41.898 53.004 12.856 59.329 0 19 42 51 14 56 0 1 2 2 1 2 4027.1 8016 631 7724 18753;18754 21689;21690 21690 2 GPPGPPGGLR Unmodified 903.49265 0.49265 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 6 0.816 1 1 1 41.057 41.057 2 2.5659E-05 11163 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.2 92.391 581.5 256.83 515.07 559.01 956.82 722.09 546 268 516 556 963 703 3 2 3 3 3 3 54867 8017 1362 7725 18755;18756;18757 21691;21692;21693 21692 3 GPPGPPGGVVVR Unmodified 1087.6138 0.61382777 2124 Q61330;A0A087WQQ9 Cntn2 Contactin-2 yes no 0 0 0 0 6.5 0.5 1 1 46.483 46.483 2 0.006433 13721 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.597 32.635 30.044 0 0 0 52.226 32.622 28 0 0 0 51 32 1 0 0 0 1 1 3700.3 8018 2124 7726 18758;18759 21694;21695 21694 2 GPPPPPGDENR Unmodified 1131.5309 0.530886 1990 Q3UJB0 Sf3b2 yes yes 0 0 0 0 3 0 1 32.508 32.508 2 1.2464E-08 8545 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.29 65.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8019 1990 7727 18760 21696 21696 1 GPPTFEDPLAFDGLSLTR Unmodified 1931.9629 0.9628928 1116 H3BJ67;H3BL92;H3BKQ3;H3BLD3 Evi5l yes no 0 0 0 0 5 0 1 87.314 87.314 3 0.049785 33355 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.042 14.804 9.585 8.8528 4.5993 5.1909 0 0 9 9 5 5 0 0 1 1 1 1 0 0 719.52 8020 1116 7728 18761 21697 21697 1 GPPVPPPPK Unmodified 884.51199 0.51198846 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 8 0 1 47.632 47.632 2 0.054612 12789 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.011 32.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8021 1157;2210 7729 18762 21698 21698 1 GPPVSGAEPSR Unmodified 1052.5251 0.52507234 1306 P04627;Q8CAD1;B1AUN8;E9Q0P8 Araf Serine/threonine-protein kinase A-Raf yes no 0 0 0 0 5 0 1 34.404 34.404 2 0.00085203 8452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.85 47.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8022 1306 7730 18763 21699 21699 1 GPQAAQEQDFYTVELER Unmodified 1979.9225 0.92248455 125 A0A0N4SWH0;Q4VBG2;A0A0R4J0S6;E9PZ12;A0A0N4SUZ0;Q6RHR9 Magi1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 0 0 0 0 3 0 1 63.068 63.068 3 1.1163E-06 22643 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.234 60.746 0 0 18.853 38.268 55.772 0 0 0 19 37 55 0 0 0 1 1 1 0 2820.3 8023 125 7731 18764 21700 21700 1 GPQEDLDR Unmodified 928.42502 0.42502394 2659 Q8R3F5;A0A2R8VHT7 Mcat Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes no 0 0 0 0 1 0 1 34.1 34.1 2 0.0012532 8654 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 139.74 69.049 0 58.493 65.246 35.341 64.379 57.859 0 56 65 37 65 56 0 1 1 1 1 1 14378 8024 2659 7732 18765 21701 21701 1 GPQLFHMDPSGTFVQCDAR Unmodified 2161.9673 0.96734302 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 7 0 1 65.52 65.52 3 1.4105E-05 21797 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.454 54.96 9.2903 28.54 37.449 18.535 0 29.848 9 28 37 19 0 28 1 1 1 1 0 1 4081.1 8025 3400 7733 18766 21702 21702 1 GPQTDDPR Unmodified 884.39881 0.39880919 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 4.75 4.82 1 1 1 1 25.362 25.362 2 0.01029 5131 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.009 33.232 157.64 212.86 56.843 174.45 95.755 205.14 148 209 55 163 102 195 3 3 2 3 1 3 149970 8026 1783 7734 18767;18768;18769;18770 21703;21704;21705;21706 21704 4 GPQYGSLER Unmodified 1005.488 0.48795855 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 0 0 0 0 7.33 4.03 1 1 1 39.419 39.419 2 0.0011101 10867 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.94 55.329 272.7 513.37 587.32 618.25 425.85 307.59 256 509 598 605 436 296 1 3 3 3 2 1 171280 8027 2133 7735 18771;18772;18773 21707;21708;21709 21708 3 GPQYGTVEK Unmodified 977.48181 0.48181054 3350 Q9WVE8;Q3UP40;A0A2R8W750 Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 0 6 0 1 42.683 42.683 2 0.022086 11944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.184 13.826 0 48.944 0 49.042 65.737 0 0 46 0 46 65 0 0 1 0 1 1 0 3311.1 8028 3350 7736 18774 21710 21710 1 GPSAAFVPPAAEPK Unmodified 1337.698 0.69795133 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 7 0 1 58.271 58.271 3 0.010701 18441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.457 19.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8029 1048 7737 18775 21711 21711 1 GPSDINLQDER Unmodified 1242.584 0.58404378 574 B1AQY2;Q69ZH9;F8VQ11;D6RDB5 Arhgap23 Rho GTPase-activating protein 23 yes no 0 0 0 0 3 0 1 45.715 45.715 2 0.00095484 14703 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.05 60.307 50.431 0 0 20.767 0 29.848 47 0 0 19 0 28 1 0 0 1 0 1 2581.1 8030 574 7738 18776 21712 21712 1 GPSEPPDR Unmodified 853.393 0.39299553 3340 Q9WV18 Gabbr1 Gamma-aminobutyric acid type B receptor subunit 1 yes yes 0 0 0 0 1.5 0.5 1 1 26.867 26.867 2 0.016775 5650 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 81.191 42.399 125.43 21.441 49.183 157.29 81.815 58.915 117 23 47 148 84 56 3 1 1 4 2 2 7336.3 8031 3340 7739 18777;18778 21713;21714;21715;21716 21715 4 GPSLNPVLDYDHGSR Unmodified 1625.7798 0.77978347 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 0 5 0 1 53.986 53.986 3 0.0054623 17868 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.319 24.761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8032 2602 7740 18779 21717 21717 1 GPSPLTMGAQDTLPVAAAFTETVNAYFK Unmodified 2896.4317 0.43169581 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 9 0 2 105.33 105.33 3;4 1.3521E-12 36956 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.31 53.989 0 13.576 0 0 0 9.594 0 13 0 0 0 9 0 2 0 0 0 1 3381.2 8033 2691;1024 7741 18780;18781 21718;21719;21720 21719 3 GPSSEAMHLGHLVPFIFTK Unmodified 2067.0612 0.061167054 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 11 0 1 74.872 74.872 4 2.8467E-05 22168 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.158 47.962 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 4030.5 8034 1506 7742 18782 21721 21721 1 GPSSVEDIK Unmodified 930.46583 0.46582612 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 7 3.54 1 1 1 1 47.95 47.95 2;3 0.0056753 15027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.749 29.579 374.62 205.81 161.66 102.58 113.51 312.3 351 213 158 102 111 296 3 2 2 2 1 3 41700 8035 2056 7743 18783;18784;18785;18786 21722;21723;21724;21725 21723 4 GPSTVTDLEETKR Unmodified 1431.7205 0.72053726 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 1 5 0 1 47.59 47.59 3 0.00020493 14839 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.235 53.088 146.89 154.05 248.7 216.66 186.7 0 139 158 248 215 188 0 1 1 1 1 1 0 6866.5 8036 1401 7744 18787 21726 21726 1 GPSYGLSAEVK Unmodified 1106.5608 0.56078914 84 A0A0G2JDV8;Q9DAW9;D3Z7R6;Q08093 Cnn3;Cnn2 Calponin-3;Calponin;Calponin-2 yes no 0 0 0 0 7 0 1 53.581 53.581 3 0.007958 16174 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.252 16.72 0 58.974 36.496 0 95.688 46.306 0 56 37 0 93 46 0 1 1 0 1 1 3302.4 8037 84 7745 18788 21727 21727 1 GPSYGLSR Unmodified 835.41882 0.41881635 3315;3349 Q9WVA4;A0A0A6YXG6;Q9R1Q8 Tagln2;Tagln3 Transgelin-2;Transgelin-3 no no 0 0 0 0 6.5 0.5 1 1 38.554 38.554 2 0.010799 9222 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.027 54.135 515.78 362.56 290.27 545.33 420.98 483.68 484 378 297 522 428 465 2 2 1 2 1 2 65259 8038 3349;3315 7746 18789;18790 21728;21729 21729 2 GPTEQLVSPEPEVHDIER Unmodified 2030.9909 0.99089846 1588 P49443;Q9EQE2 Ppm1a Protein phosphatase 1A yes no 0 0 0 0 2.5 0.5 1 1 53.867 53.867 3 5.167E-08 18021 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.414 52.497 49.247 0 18.579 38.841 26.175 38.695 46 0 19 37 28 37 1 0 1 1 1 1 6453.7 8039 1588 7747 18791;18792 21730;21731 21730 2 GPVAPAFALWDGELLTHSGLEVPK Unmodified 2503.3111 0.31111039 2755 Q91WK1 Spryd4 SPRY domain-containing protein 4 yes yes 0 0 0 0 8 0 1 90.677 90.677 4 0.0040915 32908 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.658 19.236 20.292 18.848 0 0 19.874 0 19 19 0 0 19 0 1 1 0 0 1 0 1120.5 8040 2755 7748 18793 21732 21732 1 GPVGLAIDFPESK Unmodified 1328.6976 0.69761697 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 7 0 1 74.216 74.216 3 0.0018915 25872 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.122 32.887 0 39.368 0 39.55 47.345 0 0 37 0 37 47 0 0 1 0 1 1 0 6025.7 8041 175 7749 18794 21733 21733 1 GPVTDVAYSHDGAFLAVCDASK Unmodified 2279.0528 0.052846792 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 8.6 3.67 2 1 2 65.967 65.967 3;4 6.2482E-22 23850 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.43 91.23 355.48 292.92 239.61 215.41 315.49 261.48 334 296 241 213 315 250 5 4 4 4 4 3 51503 8042 1263 7750 18795;18796;18797;18798;18799 21734;21735;21736;21737;21738 21737 5 GPVVLAEDFLDIMGQPINPQCR Unmodified 2468.2192 0.21920061 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 8.78 2.48 2 1 2 2 2 107.53 107.53 3;4 2.1551E-54 37537 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 156.22 140.96 29.076 47.764 34.571 30.935 42.641 61.784 28 47 34 29 42 59 5 7 4 4 5 8 31329 8043 1741 7751 18800;18801;18802;18803;18804;18805;18806;18807;18808 21739;21740;21741;21742;21743;21744;21745;21746;21747;21748;21749;21750;21751;21752;21753;21754 21743 16 GPVVLAEDFLDIMGQPINPQCR Oxidation (M) 2484.2141 0.21411524 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 1 0 7 0 1 107.67 107.67 3 1.568E-15 37498 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.307 87.858 5.34 4.9599 0 0 9.24 5.0663 5 5 0 0 9 5 1 1 0 0 1 1 977.81 8044 1741 7751 18809 21755 21755 132 1 GPVYIGELPQDFLR Unmodified 1602.8406 0.84059282 2503 Q8C5G6;Q9QZ06 Tollip Toll-interacting protein yes no 0 0 0 0 6.5 0.5 1 1 82.291 82.291 2;3 0.00061073 29720 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.548 61.686 30.044 0 0 30.604 38 20.254 28 0 0 28 38 19 1 0 0 1 1 1 11358 8045 2503 7752 18810;18811 21756;21757 21757 2 GPYPALQASETAEETEAEPESSSEK Unmodified 2636.1613 0.16133043 261 A0A1B0GSA5;Q80Y98 Ddhd2 Phospholipase DDHD2 yes no 0 0 0 0 2 0 1 59.551 59.551 4 0.04439 20560 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 25.52 13.324 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 1090.5 8046 261 7753 18812 21758 21758 1 GQAESEGDVPGPR Unmodified 1297.5899 0.58985744 975 E9QPK1;Q8R1U2 Cgref1 Cell growth regulator with EF hand domain protein 1 yes no 0 0 0 0 1 0 1 34.897 34.897 2 0.0007233 8970 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.652 51.782 9.612 8.9279 0 20.239 28.056 8.7934 9 9 0 19 28 9 1 1 0 1 1 1 2017.3 8047 975 7754 18813 21759 21759 1 GQAFVIFK Unmodified 908.51199 0.51198846 1032 F8VQ88;Q9CQI7;Q62189;A2CES4;D3Z0S6 Gm5145;Snrpb2;Snrpa U2 small nuclear ribonucleoprotein B'';U1 small nuclear ribonucleoprotein A yes no 0 0 0 0 10.5 0.5 1 1 69.225 69.225 2;3 0.0053532 20250 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.931 28.619 20.387 71.317 125.56 40.441 135.98 49.036 19 69 120 37 130 46 1 1 1 1 1 1 11256 8048 1032 7755 18814;18815 21760;21761 21760 2 GQALPEVVAK Unmodified 1010.576 0.57604528 2633 Q8R0Y6;A0A0N4SW56;A0A0N4SVT2 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 6.5 0.5 1 1 55.544 55.544 2;3 0.0099572 17154 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.595 35.938 88.429 72.023 44.861 57.128 141.15 47.142 83 74 46 56 139 46 2 2 1 1 2 1 9228 8049 2633 7756 18816;18817 21762;21763 21763 2 GQAQAPPR Unmodified 823.43005 0.43004974 19 A0A087WPR1;P20917;Q3ZB60 Mag Myelin-associated glycoprotein yes no 0 0 0 0 7 3.54 1 1 1 1 22.706 22.706 2 0.0013025 3452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.64 83.655 44.916 82.401 26.44 73.568 130.97 135.68 42 79 27 70 131 130 3 4 3 4 4 4 9158 8050 19 7757 18818;18819;18820;18821 21764;21765;21766;21767;21768;21769 21766 6 GQAVDYDGSR Unmodified 1066.468 0.46795139 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 2.5 0.5 1 1 33.831 33.831 2 0.0099103 9145 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.664 36.1 0 23.917 33.189 0 47.467 18.9 0 23 32 0 46 19 0 1 1 0 1 1 3816.2 8051 193 7758 18822;18823 21770;21771 21771 2 GQCDLELINVCNENSLFK Unmodified 2151.9929 0.99288907 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 5.75 0.829 2 1 1 79.423 79.423 3;4 2.1551E-16 29846 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.18 105.79 394.86 219.32 175.34 287.92 291.63 209.94 370 232 176 278 297 203 5 4 2 5 4 3 82127 8052 2185 7759 18824;18825;18826;18827 21772;21773;21774;21775;21776 21773 5 GQCDLELINVCNENSLFK Deamidation (N) 2152.9769 0.97690466 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 5 0 1 80.805 80.805 3 2.4128E-07 30561 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.585 56.047 29.904 67.144 0 49.612 103.42 28.837 28 65 0 46 102 28 1 2 0 1 2 1 4501.9 8053 2185 7759 18828 21777;21778 21778 858 2 GQDNQDSSHQESSLQQEAGEDSVSSGETVELK Unmodified 3404.4724 0.47238724 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 2 0 2 53.899 53.899 4;5 3.3652E-06 17907 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 44.317 38.537 20.387 0 0 18.962 37.87 29.322 19 0 0 18 38 28 1 0 0 2 2 1 4538.7 8054 2028 7760 18829;18830 21779;21780 21780 2 GQDPLVPAPTK Unmodified 1121.6081 0.60807369 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8 3.56 1 1 1 52.945 52.945 2;3 0.0010249 17519 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.498 39.399 69.508 78.736 39.786 89.222 184.17 152.51 65 74 37 84 185 148 2 1 1 2 3 3 12355 8055 2295 7761 18831;18832;18833 21781;21782;21783 21781 3 GQEDAILSYEPVTR Unmodified 1576.7733 0.77330111 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 0 3 0 1 60.754 60.754 2 4.9985E-14 21570 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.337 64.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8056 538 7762 18834 21784 21784 1 GQEDLILSYEPVTR Unmodified 1618.8203 0.82025131 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 4.67 0.471 1 2 67.616 67.616 2;3 8.9636E-12 24281 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.29 87.554 0 19.899 18.976 28.94 28.359 37 0 19 19 28 28 37 0 1 1 2 1 1 18023 8057 690 7763 18835;18836;18837 21785;21786;21787 21785 3 GQELAFPLSPDWQVDYESYTWR Unmodified 2686.234 0.23398228 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 6.5 0.5 1 1 93.001 93.001 3 1.393E-09 35220 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.207 57.931 0 5.1624 9.4283 0 0 9.594 0 5 9 0 0 9 0 1 1 0 0 1 2898.5 8058 3094 7764 18838;18839 21788;21789 21788 2 GQEPLKDQGPVVPGLPK Unmodified 1757.9676 0.96758424 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 6.67 0.471 1 2 60.703 60.703 3;4 2.8423E-06 19552 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.85 60.166 89.505 47.816 172.84 101.68 292.67 83.342 84 46 167 102 287 83 2 1 3 2 3 2 27596 8059 2295 7765 18840;18841;18842 21790;21791;21792 21791 3 GQETSTNPIASIFAWSR Unmodified 1863.9115 0.91152593 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 8 0 1 85.71 85.71 3 0.0016579 30736 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.461 33.287 0 19.751 27.822 28.946 0 0 0 19 28 28 0 0 0 1 1 1 0 0 2935.6 8060 1278 7766 18843 21793 21793 1 GQEVSPK Unmodified 743.38137 0.38136821 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 6 1 1 1 34.135 34.135 2 0.027076 8416 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.657 23.975 48.876 212.13 97.462 132.76 284.61 93.793 46 204 102 130 281 93 1 2 1 1 2 1 104560 8061 3302 7767 18844;18845 21794;21795 21794 2 GQFSTDELVAEVEK Unmodified 1550.7464 0.74641766 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.71 4.03 1 2 2 2 72.27 72.27 2;3;4 8.5242E-29 26417 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 158.11 101.48 207.19 136.72 296.74 237.28 159.04 106.11 195 139 287 233 158 102 5 3 4 5 4 3 78680 8062 2185 7768 18846;18847;18848;18849;18850;18851;18852 21796;21797;21798;21799;21800;21801;21802 21797 7 GQFSTDELVAEVEKR Unmodified 1706.8475 0.84752869 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 6.29 2.91 2 2 1 1 1 66.628 66.628 3;4 1.5396E-42 23108 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 188 157.56 294.61 550.71 967.82 783.35 861.8 622.1 278 546 957 780 878 598 3 4 6 6 7 5 246230 8063 2185 7769 18853;18854;18855;18856;18857;18858;18859 21803;21804;21805;21806;21807;21808;21809;21810 21808 8 GQGFVSEDEYLEISDIK Unmodified 1927.9051 0.90510315 2192 Q6DFY2 Opcml yes yes 0 0 0 0 4 0 1 76.949 76.949 3 2.2455E-06 28585 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.35 74.487 39.522 0 30.097 0 29.288 0 37 0 28 0 28 0 1 0 1 0 1 0 3811.2 8064 2192 7770 18860 21811 21811 1 GQGFVSEDEYLEISDIKR Unmodified 2084.0062 0.006214175 2192 Q6DFY2 Opcml yes yes 0 0 0 1 5 0 1 68.823 68.823 4 0.0035843 24781 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.068 24.473 48.953 0 68.087 44.803 75.346 0 46 0 65 46 74 0 1 0 1 1 1 0 4365.5 8065 2192 7771 18861 21812 21812 1 GQGGGGGAGEPGGAER Unmodified 1312.5756 0.57560436 1266 O88444 Adcy1 Adenylate cyclase type 1 yes yes 0 0 0 0 1 0 1 23.714 23.714 2 8.7196E-05 4036 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.582 78.062 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 3244.2 8066 1266 7772 18862 21813 21813 1 GQGWDYGIGGGWDHISVR Unmodified 1958.9024 0.90235823 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 7 0 1 68.717 68.717 3 0.056993 23341 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 29.118 10.753 49.358 0 0 0 57.607 28.204 46 0 0 0 56 28 1 0 0 0 1 1 2007.8 8067 2323 7773 18863 21814 21814 1 GQHPNPLR Unmodified 917.48315 0.48314794 2118 Q61205;D3Z7E6 Pafah1b3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 0 6 0 1 26.207 26.207 3 0.038153 4457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.994 15.69 0 0 38.334 38.156 0 0 0 0 37 37 0 0 0 0 1 1 0 0 3080.2 8068 2118 7774 18864 21815 21815 1 GQHQAHSLER Unmodified 1161.5639 0.56391746 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 6.67 4.5 1 1 1 20.093 20.093 3 6.3426E-07 2726 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.44 84.282 50.243 37.18 32.988 46.101 60.267 20.409 47 37 33 44 59 20 3 3 4 4 2 2 10001 8069 1666 7775 18865;18866;18867 21816;21817;21818;21819;21820 21819 5 GQIEEAGWSYVGGWTGQGGSK Unmodified 2152.9814 0.98139641 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 8.5 2.69 1 1 1 1 74.093 74.093 3 2.0197E-19 25211 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.47 74.847 59.294 122.33 81.072 206.19 54.389 87.992 56 120 84 194 56 84 2 3 2 3 1 2 40065 8070 1568 7776 18868;18869;18870;18871 21821;21822;21823;21824 21823 4 GQILWFR Unmodified 918.50757 0.50757178 1042;1096;487;333 G5E829;A0A1W2P6X7;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;A0A1W2P882 Atp2b1;Atp2b2;Atp2b3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 11 0 1 69.802 69.802 2 0.048867 19951 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.847 20.036 0 0 139 0 0 0 0 0 139 0 0 0 0 0 1 0 0 0 41034 8071 1096;1042;487;333 7777 18872 21825 21825 1 GQIQEAIALINSLHPELLDTNR Unmodified 2444.3023 0.30233662 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 9 0 1 93.894 93.894 3 0.024974 33547 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 31.599 20.555 20.24 0 24.784 0 0 0 19 0 23 0 0 0 1 0 1 0 0 0 977.87 8072 3079 7778 18873 21826 21826 1 GQIQLDPQTVESK Unmodified 1441.7413 0.7412727 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 6 0 1 58.283 58.283 3 0.0031844 19301 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.726 20.498 0 127.68 0 79.38 79.845 96.86 0 120 0 74 83 93 0 1 0 1 1 1 5059.1 8073 816 7779 18874 21827 21827 1 GQISEPLK Unmodified 870.48108 0.48108226 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 47.768 47.768 2;3 0.0012503 13520 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 144.09 24.798 641.73 533.66 818.12 760.17 807.62 442.12 604 554 820 754 820 426 3 4 5 5 5 4 97724 8074 1055 7780 18875;18876;18877;18878;18879 21828;21829;21830;21831;21832 21830 5 GQIYEVNFK Deamidation (N) 1097.5393 0.53932542 3430 yes no 0 1 0 0 6 0 1 56.923 56.923 3 0.014445 18606 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.78 22.758 139.09 0 67.125 56.198 53.667 67.759 130 0 65 56 56 65 1 0 1 1 1 1 7571.3 + 8075 3430 7781 18880 21833 21833 1152 1 GQLESTLR Unmodified 902.48214 0.48214489 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 5 0 1 41.625 41.625 2 0.018897 11936 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.1 21.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8076 1198 7782 18881 21834 21834 1 GQLGDLQDYHK Unmodified 1272.6099 0.6098646 2515 Q8CAK1 Iba57 Putative transferase CAF17 homolog, mitochondrial yes yes 0 0 0 0 6 0 1 51.104 51.104 3 0.00059345 15756 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.76 34.171 0 0 38.405 36.575 83.866 37.049 0 0 37 37 83 37 0 0 1 1 1 1 3118.9 8077 2515 7783 18882 21835 21835 1 GQLLIFGATNWDLIGR Unmodified 1772.9574 0.95735391 2421 Q8BK67;A2AWQ2 Rcc2 Protein RCC2 yes no 0 0 0 0 11 0 1 93.26 93.26 3 0.0011588 30048 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.147 32.782 0 0 19.685 19.594 0 20.254 0 0 19 19 0 19 0 0 1 1 0 1 2157.7 8078 2421 7784 18883 21836 21836 1 GQLQEAIEHYR Unmodified 1342.663 0.6629628 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 5 0 1 51.222 51.222 3 7.4111E-05 16654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.094 60.206 0 48.944 0 30.604 0 59.696 0 46 0 28 0 56 0 1 0 1 0 1 6258.9 8079 2543 7785 18884 21837 21837 1 GQLTIDQVFPYPSVLSEEQAQFLK Unmodified 2736.401 0.40104761 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 95.128 95.128 4 1.7882E-16 35104 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.946 70.902 14.98 0 7.0791 9.4151 0 9.594 14 0 7 9 0 9 1 0 1 1 0 1 782.95 8080 577 7786 18885 21838 21838 1 GQMQKPFEDASFALR Unmodified 1723.8352 0.83518986 3260 Q9QUR7 Pin1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 0 0 0 1 8 0 1 63.183 63.183 3 0.030159 20061 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.499 26.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8081 3260 7787 18886 21839 21839 1 GQNEDPGSLLTQFR Unmodified 1560.7532 0.75323437 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 5 0 1 67.338 67.338 2 3.0315E-24 24055 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.29 122.76 20.387 0 0 30.269 17.805 19.746 19 0 0 28 19 19 1 0 0 1 1 1 5106.6 8082 1348 7788 18887 21840 21840 1 GQNLLLTNLQTIQGILER Unmodified 2023.1426 0.1425885 1009 F6ZDS4;Q7M739 Tpr Nucleoprotein TPR yes no 0 0 0 0 10.5 0.5 1 1 97.758 97.758 3 1.5638E-07 31952 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.45 79.03 0 0 28.325 9.2813 0 0 0 0 28 9 0 0 0 0 2 1 0 0 4628.3 8083 1009 7789 18888;18889 21841;21842 21841 2 GQNSLALHK Unmodified 966.52468 0.52467841 1784 P63321;A0A1Y7VL93 Rala Ras-related protein Ral-A yes no 0 0 0 0 7 0 1 40.166 40.166 3 0.0040882 9927 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.297 23.31 59.862 44.908 0 0 36.688 58.649 56 46 0 0 37 56 1 1 0 0 1 1 4964.7 8084 1784 7790 18890 21843 21843 1 GQNTYEEAAVYIQR Unmodified 1640.7794 0.77944912 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 4 0 1 56.477 56.477 3 1.5055E-07 19334 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.02 80.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9555.4 8085 1255 7791 18891 21844 21844 1 GQNVTEEECLEK Unmodified 1434.6297 0.62967334 753 Q9JL62;D3Z1H9;D3Z1H8 Gltp Glycolipid transfer protein yes no 0 0 0 0 2.5 0.5 1 1 47.228 47.228 3 0.00021362 14871 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.891 44.102 0 118.27 53.496 0 84.191 76.482 0 112 56 0 83 74 0 2 2 0 2 2 10437 8086 753 7792 18892;18893 21845;21846 21845 2 GQPDEELKPK Unmodified 1139.5823 0.58225287 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 1 5 0 1 43.295 43.295 3 0.007406 12743 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.624 25.903 118.48 0 105.19 102.63 137.41 95.217 111 0 102 102 139 93 1 0 1 1 1 1 5964.8 8087 432 7793 18894 21847 21847 1 GQPFDVGPR Unmodified 971.48248 0.48247924 769 D3Z3G6;Q63844;A0A0U1RPX4 Mapk3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 0 5.5 0.5 1 1 48.196 48.196 2 0.0037982 15080 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.948 39.589 39.171 104.39 89.482 105.13 54.471 176.47 37 102 93 102 56 167 1 2 2 2 1 2 15163 8088 769 7794 18895;18896 21848;21849 21848 2 GQPLLVFR Unmodified 928.54944 0.54943659 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 9.5 0.5 1 1 62.877 62.877 2 0.012094 19231 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.777 62.67 307.78 142.88 267.94 73.171 293 172.88 289 158 260 74 289 167 2 2 2 1 2 1 71722 8089 2138 7795 18897;18898 21850;21851 21850 2 GQPPVVDGELYNEVK Unmodified 1642.8203 0.82025131 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 8.5 4.5 1 1 63.423 63.423 3 9.2658E-06 22645 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.022 58.069 129.09 63.969 196.8 232.01 0 178.02 121 65 194 223 0 167 2 1 2 3 0 2 13537 8090 1207 7796 18899;18900 21852;21853;21854 21853 3 GQPSPSAQVQQ Unmodified 1125.5415 0.54145068 2327 Q80W82 Mapk10 Mitogen-activated protein kinase yes yes 0 0 0 0 3.5 0.5 1 1 36.315 36.315 2 1.6169E-07 9831 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.93 73.418 20.334 19.907 27.472 34.283 7.9082 24.292 19 19 28 33 9 23 1 1 2 2 1 1 6423.3 8091 2327 7797 18901;18902 21855;21856 21856 2 GQQQVFK Unmodified 833.43955 0.43955179 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 7.5 0.5 1 1 42.016 42.016 2 0.017391 10831 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.61 64.894 112.75 109.28 73.162 119.05 179.64 122.79 106 111 74 116 181 120 2 2 1 2 2 2 11179 8092 2435 7798 18903;18904 21857;21858 21857 2 GQQYHEIGR Unmodified 1086.5207 0.52065566 602;2570 B1AWV9;Q5DTL9;Q8JZR6 Slc4a10;Slc4a8 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger;Electroneutral sodium bicarbonate exchanger 1 no no 0 0 0 0 5 0 1 27.841 27.841 3 0.033672 5524 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.651 27.761 20.387 0 0 0 0 29.848 19 0 0 0 0 28 1 0 0 0 0 1 3068.3 8093 602;2570 7799 18905 21859 21859 1 GQSGELAAASGK Unmodified 1074.5306 0.53055165 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1 Tln2 Talin-2 yes no 0 0 0 0 5 0 1 41.744 41.744 3 0.00019612 11929 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.073 42.206 0 0 58.536 46.152 33.906 77.916 0 0 56 46 37 74 0 0 1 1 1 1 3153.8 8094 287 7800 18906 21860 21860 1 GQSPASSEEQR Unmodified 1174.5214 0.52144352 861 E9PZ54;Q6P6I6 Gcom1;Polr2m DNA-directed RNA polymerase II subunit GRINL1A yes no 0 0 0 0 1 0 1 22.631 22.631 2 1.9416E-08 3694 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.56 90.211 15.022 0 0 14.418 46.987 13.583 14 0 0 14 46 14 1 0 0 1 1 1 1909.5 8095 861 7801 18907 21861 21861 1 GQSPTAPGPTK Unmodified 1039.5298 0.52982336 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 5.5 0.5 1 1 36.591 36.591 3 0.0011182 9560 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.395 33.964 78.94 29.344 104.53 82.55 103.1 75.942 74 28 102 83 102 74 1 1 2 2 1 2 12217 8096 2295 7802 18908;18909 21862;21863 21862 2 GQTAVQK Unmodified 730.39735 0.39735263 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 7 0 1 32.573 32.573 2 0.055109 6424 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.189 23.759 88.415 52.557 63.735 67.246 0 0 83 56 65 65 0 0 1 1 1 1 0 0 6549.9 8097 1582 7803 18910 21864 21864 1 GQTLVVQFTVK Unmodified 1218.6972 0.69722304 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 10 0.816 1 1 1 68.744 68.744 2;3 1.173E-08 22042 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.39 92.788 263.43 146.16 0 118.14 207.96 0 250 148 0 111 204 0 4 2 0 2 3 0 31344 8098 1375 7804 18911;18912;18913 21865;21866;21867;21868 21865 4 GQTNNAASASASNST Unmodified 1379.5913 0.591314 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 0 3 0 1 27.649 27.649 2 0.00025365 6298 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.401 86.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1053 8099 947 7805 18914 21869 21869 1 GQTNVGQDGR Unmodified 1030.4792 0.47918478 915 E9Q648;Q8CCB4;F6Z4G7;E9PYD3;E9PXG9;E9PWD1 Vps53 Vacuolar protein sorting-associated protein 53 homolog yes no 0 0 0 0 6.67 4.5 1 1 1 23.667 23.667 2 2.133E-07 4166 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 140.49 80.554 29.897 0 34.067 24.059 27.872 9.0554 28 0 32 23 28 9 1 0 2 2 2 1 4559.6 8100 915 7806 18915;18916;18917 21870;21871;21872 21871 3 GQTPLILSVKPSFLVPDPR Unmodified 2063.1779 0.17791137 669 D3YTS3;Q68FD9 D630045J12Rik;Kiaa1549 UPF0606 protein KIAA1549 yes no 0 0 0 1 11 0.816 1 1 1 79.673 79.673 3;4 1.0566E-05 21553 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.081 59.798 14.932 0 15.073 61.208 0 94.874 14 0 14 56 0 89 1 0 1 1 0 2 9284.2 8101 669 7807 18918;18919;18920 21873;21874;21875 21875 3 GQTSGQIVMPR Unmodified 1172.5972 0.59719142 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 0 6 0 1 43.627 43.627 2 0.0019862 12364 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83 50.779 0 38.901 27.962 0 0 49.036 0 37 28 0 0 46 0 1 1 0 0 1 3067.7 8102 3089 7808 18921 21876 21876 1 GQTVTFTCVATGVPTPIINWR Unmodified 2317.1889 0.18888676 611 E9PZ16;B1B0C7;Q05793 Hspg2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes no 0 0 0 0 9 0 1 83.162 83.162 3 0.027779 28767 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 31.621 13.256 9.5432 11.975 8.9714 0 0 0 9 12 9 0 0 0 1 1 1 0 0 0 1783.7 8103 611 7809 18922 21877 21877 1 GQTYATEWSDDESGNPFGGNEANGGANPFEDDAK Unmodified 3546.4356 0.43560781 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 3.33 0.471 2 1 77.599 77.599 4 0.0021664 29276 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.233 27.943 0 20.216 0 9.4714 37.58 20.005 0 19 0 9 37 19 0 1 0 1 3 1 6450.6 8104 2133 7810 18923;18924;18925 21878;21879;21880 21878 3 GQVAPANK Unmodified 783.4239 0.42390173 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 8.67 3.09 1 1 1 33.947 33.947 2 0.012397 7121 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 58.177 48.815 104.64 35.872 106.45 35.12 113.06 46 102 37 98 37 107 1 2 1 2 1 3 7388.5 8105 894 7811 18926;18927;18928 21881;21882;21883 21882 3 GQVCLPVISAENWKPATK Unmodified 1997.0404 0.040431612 412 A0A338P786;P68037;A0A338P7E5;A0A338P702 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 1 9 0 1 70.589 70.589 4 5.1381E-07 22880 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.146 70.985 98.687 0 185.13 107.82 131.03 0 93 0 176 111 130 0 1 0 1 1 1 0 20985 8106 412 7812 18929 21884 21884 1 GQVEQANQELR Unmodified 1270.6266 0.6265773 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 3 0 1 36.785 36.785 2 7.5762E-05 10600 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.734 70.619 0 0 0 30.098 26.907 29.08 0 0 0 28 28 28 0 0 0 1 1 1 2806.5 8107 2123 7813 18930 21885 21885 1 GQVFDVGPR Unmodified 973.49813 0.49812931 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 0 5 0 1 51.41 51.41 2 0.019714 16661 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.305 26.157 48.604 74.395 63.595 45.495 52.804 107.23 46 74 65 46 56 102 1 1 1 1 1 1 5040.2 8108 1769 7814 18931 21886 21886 1 GQVGPEDPK Unmodified 925.45051 0.45051041 2887 Q99PG2 Ogfr Opioid growth factor receptor yes no 0 0 0 0 4 0 1 39.156 39.156 2 0.064712 11183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.608 17.847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8109 2887 7815 18932 21887 21887 1 GQVLAAAYELQR Unmodified 1317.7041 0.70409934 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 61.324 61.324 2 1.2223E-11 21554 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.02 105.87 49.358 0 154.72 221.81 189.57 181.14 46 0 148 214 194 175 1 0 3 4 3 3 40609 8110 2186 7816 18933;18934;18935;18936 21888;21889;21890;21891;21892 21892 5 GQVLFDK Unmodified 805.4334 0.43340378 3345 Q9WV92;A7YY80;A0A286YCY8;A0A286YDD0;A0A286YD94 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 0 13 0 1 55.914 55.914 2 0.027622 19192 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.009 53.398 249.49 180.4 295.11 220.79 401.34 323.27 235 190 293 225 404 314 1 1 1 1 1 1 18741 8111 3345 7817 18937 21893 21893 1 GQVLFDLVCEHLNLLEK Unmodified 2026.0557 0.055747325 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 10.5 1.5 1 2 1 91.631 91.631 3;4 6.4925E-09 29839 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.53 75.981 20.277 36.87 87.859 88.919 47.964 9.0611 19 35 87 86 47 9 1 2 4 3 2 1 19404 8112 526 7818 18938;18939;18940;18941 21894;21895;21896;21897 21895 4 GQVPPLVTTNFLVK Unmodified 1511.8712 0.87116466 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 0 9.5 0.5 1 1 78.717 78.717 3 0.00010323 24413 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.699 63.473 157.79 81.324 101.82 73.312 79.794 166.15 148 83 102 74 83 158 2 1 1 1 1 2 13119 8113 366 7819 18942;18943 21898;21899 21899 2 GQVQEVGWHDVAGWLGR Unmodified 1892.9282 0.92817905 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 9 2.94 1 1 1 71.034 71.034 3 1.7939E-08 25397 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.04 82.893 93.928 122.1 188.35 97.406 86.818 108.73 88 120 181 92 83 102 2 2 2 2 1 2 50306 8114 1357 7820 18944;18945;18946 21900;21901;21902 21900 3 GQVSEGGQLR Unmodified 1029.5203 0.52032131 1979 Q3UHD6 Snx27 Sorting nexin-27 yes yes 0 0 0 0 4.5 0.5 1 1 32.641 32.641 2 0.00016139 7591 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.973 53.957 50.201 0 38.623 68.743 0 39.442 47 0 37 65 0 37 2 0 1 2 0 1 9118.5 8115 1979 7821 18947;18948 21903;21904 21904 2 GQVTSSCSSQR Unmodified 1195.5251 0.52514869 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 7 3.54 1 1 1 1 22.858 22.858 2 2.8689E-09 3478 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.89 88.213 19 14.505 50.462 13.557 24.85 39.978 19 14 48 14 25 38 1 1 3 1 2 2 6431.1 8116 2513 7822 18949;18950;18951;18952 21905;21906;21907;21908 21908 4 GQVYILGR Unmodified 904.51305 0.51305109 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 9 0 1 52.684 52.684 2 0.011407 14392 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.561 48.6 197.54 84.105 91.364 72.281 167.79 103.94 185 93 93 74 167 102 1 1 1 1 1 1 11871 8117 1393 7823 18953 21909 21909 1 GQYFGELALVTNKPR Deamidation (N) 1692.8835 0.88352026 1495;68 P31324;H3BK84;A0A0A6YX73;Q8K1M3;P12367 Prkar2b;Prkar2a cAMP-dependent protein kinase type II-beta regulatory subunit;cAMP-dependent protein kinase type II-alpha regulatory subunit no no 0 1 0 1 8.5 0.5 1 1 67.02 67.02 3;4 0.0078038 21977 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.828 31.956 0 106.46 198.89 103.97 305.89 0 0 102 194 102 297 0 0 1 2 1 2 0 119260 8118 1495;68 7824 18954;18955 21910;21911 21910 21 2 GQYFGELALVTNKPR Unmodified 1691.8995 0.89950468 1495;68 P31324;H3BK84;A0A0A6YX73;Q8K1M3;P12367 Prkar2b;Prkar2a cAMP-dependent protein kinase type II-beta regulatory subunit;cAMP-dependent protein kinase type II-alpha regulatory subunit no no 0 0 0 1 10 1 1 1 66.862 66.862 3 2.7714E-25 21202 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.94 111.55 254.72 252.66 407.22 277.99 470.88 323.42 240 260 403 280 473 316 1 2 2 1 1 1 74550 8119 1495;68 7824 18956;18957 21912;21913 21912 2 GRDWNVDLIPK Unmodified 1311.6935 0.69353465 1595;2132 Q61598;A0A1Y7VL99;P50396;D6RI86 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 1 9.4 3.01 1 1 1 2 61.896 61.896 3;4 0.00079532 21838 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.653 56.78 594.9 721.8 674.19 543.28 925.37 866.9 561 720 676 533 937 838 5 5 5 5 6 6 159270 8120 2132;1595 7825 18958;18959;18960;18961;18962 21914;21915;21916;21917;21918;21919 21919 6 GRLDSGQLGLYPANYVEAI Unmodified 2035.0375 0.037454724 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 1 13 0 1 79.804 79.804 3 0.00010903 30786 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.496 40.007 49.128 45.631 0 29.375 65.35 37.577 46 46 0 28 65 37 1 1 0 1 1 1 9152.9 8121 2133 7826 18963 21920 21920 1 GRLEEVGNQAR Unmodified 1227.632 0.63199703 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 1 13 0 1 31.244 31.244 3 0.00054475 7200 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.689 53.842 0 77.71 61.378 96.3 89.904 85.913 0 74 65 93 93 83 0 1 1 1 1 1 13477 8122 1325 7827 18964 21921 21921 1 GRPAATEVK Unmodified 927.51378 0.51377937 541 Q99JF8;A2BI12 Psip1 PC4 and SFRS1-interacting protein yes no 0 0 0 1 6 0 1 30.764 30.764 3 0.05072 6317 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.092 20.356 0 39.368 0 59.492 91.23 96.535 0 37 0 56 93 93 0 1 0 1 1 1 3571.9 8123 541 7828 18965 21922 21922 1 GRPQVEFR Unmodified 987.52501 0.52501276 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;B7ZCD3 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 1 6 0 1 34.255 34.255 3 0.048141 7924 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.859 17.59 68.891 42.502 107.47 0 84.191 76.482 65 46 102 0 83 74 1 1 1 0 1 1 7261 8124 456 7829 18966 21923 21923 1 GRPSSSGTPR Unmodified 1000.505 0.5050056 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 1 6.5 0.5 1 1 17.254 17.254 3 0.0076385 2792 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.073 31.652 14.857 10.067 19.261 13.88 14.591 13.442 14 10 19 14 15 13 2 1 2 2 2 2 2858.3 8125 732 7830 18967;18968 21924;21925 21925 2 GRPTSTNPIASIFAWTR Unmodified 1873.9799 0.97988027 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 1 6.5 5.5 1 1 75.407 75.407 3 1.0446E-05 26115 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.953 50.122 151.02 99.261 142.82 92.117 101.49 168.73 142 99 142 90 105 161 3 2 3 2 2 3 40700 8126 1618 7831 18969;18970 21926;21927;21928 21926 3 GSADPEEESVLYSNR Unmodified 1651.7326 0.73255851 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 0 2 0.707 1 2 1 49.879 49.879 2;3 2.735E-08 16060 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.09 101.3 17.026 132.26 102.97 98.941 68.322 163.28 16 127 105 97 72 155 1 4 3 3 3 4 21057 8127 2994 7832 18971;18972;18973;18974 21929;21930;21931;21932 21930 4 GSAITGPVAK Unmodified 899.50763 0.50763136 1745 P62830 Rpl23 60S ribosomal protein L23 yes yes 0 0 0 0 7 0 1 46.39 46.39 3 0.026475 12870 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.894 17.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8128 1745 7833 18975 21933 21933 1 GSALGPDEAGGELER Unmodified 1456.6794 0.67940073 1669 P60469 Ppfia3 Liprin-alpha-3 yes yes 0 0 0 0 2.5 0.5 1 1 47.99 47.99 2 1.9184E-41 15191 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 183.06 151.22 63.901 59.022 30.45 47.973 74.599 47.973 60 60 32 46 75 47 2 2 1 1 2 2 12775 8129 1669 7834 18976;18977 21934;21935 21934 2 GSALILQLAR Unmodified 1040.6342 0.63422886 1799 P70188 Kifap3 Kinesin-associated protein 3 yes yes 0 0 0 0 10 0 1 68.046 68.046 2 0.0097068 19548 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.962 38.563 60.088 0 0 0 65.345 77.019 56 0 0 0 65 74 1 0 0 0 1 1 6160.4 8130 1799 7835 18978 21936 21936 1 GSALPLAIK Unmodified 868.5382 0.53820321 2317;1802 Q80UG2;P70207;P70208;P70206 Plxna4;Plxna2;Plxna3;Plxna1 Plexin-A4;Plexin-A2;Plexin-A3;Plexin-A1 no no 0 0 0 0 9.5 0.5 1 1 63.228 63.228 2;3 0.001615 17372 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.02 76.222 148.32 77.068 74.339 75.275 62.543 136.8 139 83 74 74 65 130 2 2 1 1 1 2 16759 8131 2317;1802 7836 18979;18980 21937;21938 21938 2 GSAQESLDTISPK Unmodified 1331.6569 0.65687437 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 7 3.54 1 1 1 1 52.574 52.574 2;3 2.5587E-11 17310 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.92 67.358 88.59 210.45 66.75 97.17 183.81 231.41 83 204 65 93 185 222 1 3 2 2 3 4 27679 8132 1424 7837 18981;18982;18983;18984 21939;21940;21941;21942 21942 4 GSASSALELTEEELATAEAVR Unmodified 2133.0437 0.043721893 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 7.5 5.5 1 1 82.094 82.094 3 5.2023E-11 31747 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.889 69.657 0 3.0912 46.064 6.1986 38.702 6.396 0 3 43 6 37 6 0 1 2 1 1 1 6556.4 8133 2633 7838 18985;18986 21943;21944 21944 2 GSDCGIVNVNIPTSGAEIGGAFGGEK Unmodified 2505.1806 0.1805665 3122 Q9DBF1;G3UYR8 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 5 0 1 75.67 75.67 3 5.0103E-06 28051 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.732 34.913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8134 3122 7839 18987 21945 21945 1 GSDCIDQFR Unmodified 1096.4608 0.46075752 2707 Q8VEA4 Chchd4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 0 0 0 0 4 0 1 46.214 46.214 2 0.023769 14474 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.679 43.831 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 2975 8135 2707 7840 18988 21946 21946 1 GSDDAPDADTAIINAEGGQSGGDDK Unmodified 2374.9997 0.99968483 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 2 0 1 57.302 57.302 3 8.6173E-08 19473 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 52.321 45.443 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8136 1152 7841 18989 21947 21947 1 GSDDAPDADTAIINAEGGQSGGDDKK Unmodified 2503.0946 0.094647844 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 1 2.5 0.5 1 1 53.934 53.934 4 2.1488E-25 18393 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.41 101.57 176.41 133.08 174.51 158.12 222.06 114.68 166 139 176 158 223 111 2 2 2 2 2 1 29946 8137 1152 7842 18990;18991 21948;21949 21949 2 GSDELYAIK Unmodified 994.49713 0.49712625 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 8.6 3.61 1 2 2 57.547 57.547 2;3 0.0023286 18849 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.502 51.694 78.646 149.39 166.52 108.06 214.21 105.58 74 148 167 111 213 102 1 2 2 2 3 2 27878 8138 1783 7843 18992;18993;18994;18995;18996 21950;21951;21952;21953;21954 21952 5 GSDFDCELR Unmodified 1097.4448 0.44477311 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;H3BJS9 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 3 0.816 1 1 1 47.253 47.253 2 0.00062243 15285 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.87 86.616 207.64 110.33 212.23 85.549 286.41 134.85 195 111 204 83 279 130 4 2 4 2 4 3 104700 8139 613 7844 18997;18998;18999 21955;21956;21957;21958;21959 21957 5 GSDGAASSYQLK Unmodified 1182.5517 0.55168102 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 5.5 0.5 1 1 46.235 46.235 2;3 9.1588E-05 13604 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.326 46.559 9.4792 0 29.889 8.0556 0 0 9 0 28 9 0 0 1 0 1 1 0 0 1904.4 8140 895 7845 19000;19001 21960;21961 21961 2 GSDHSASLEPGELAELVR Unmodified 1865.9119 0.91191986 2825 Q99J77 Nans yes yes 0 0 0 0 3.5 0.5 1 1 64.082 64.082 3 4.5642E-07 22795 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.51 65.666 29.889 8.6229 18.686 39.182 7.7441 9.373 28 9 19 37 9 9 2 1 1 2 1 1 6793 8141 2825 7846 19002;19003 21962;21963 21963 2 GSDNHSPISK Unmodified 1040.4887 0.48868683 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 6.5 0.5 1 1 33.364 33.364 3 0.0046872 6795 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.676 28.108 179.19 38.42 56.682 192.45 339.25 250.42 167 37 56 185 341 244 1 1 1 2 2 2 19155 8142 1362 7847 19004;19005 21964;21965 21965 2 GSDSIAYDK Unmodified 954.42944 0.42944062 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;D3Z0T1 Add1 Alpha-adducin yes no 0 0 0 0 5 0.816 1 1 1 44.733 44.733 2 0.001476 13397 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.65 68.806 147.54 277.84 160.27 256.09 172.22 199.98 139 273 167 246 176 190 2 3 2 3 2 2 24283 8143 3276 7848 19006;19007;19008 21966;21967;21968 21967 3 GSDSSPTPR Unmodified 902.40937 0.40937388 2310 Q80U23;Z4YN82 Snph Syntaphilin yes no 0 0 0 0 3 0 1 22.524 22.524 2 0.047997 4023 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.378 34.832 20.129 18.393 27.832 28.26 36.414 28.809 19 19 28 28 37 28 1 1 1 1 1 1 5478 8144 2310 7849 19009 21969 21969 1 GSDVIIMLVGNK Unmodified 1244.6799 0.67985842 1515;1697 P35279;D3YV69;P61294;A0A1L1SRS6 Rab6a;Rab6b Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 0 0 0 10.2 1.64 2 1 1 80.988 80.988 2;3 6.6032E-18 25542 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 147.95 100.12 108.62 139.1 88.048 120.87 120.92 138.58 102 139 83 112 120 130 2 4 1 2 2 2 23519 8145 1515;1697 7850 19010;19011;19012;19013 21970;21971;21972;21973 21972 4 GSEEDPLLSPVETWK Unmodified 1685.8148 0.81483158 857 E9PYT0;P97393 Arhgap5 Rho GTPase-activating protein 5 yes no 0 0 0 0 4 0 1 80.101 80.101 2 0.057834 30037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.589 14.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8146 857 7851 19014 21974 21974 1 GSEEELNDIK Unmodified 1132.5248 0.52479757 2759 Q91WN1 Dnajc9 DnaJ homolog subfamily C member 9 yes yes 0 0 0 0 3 0 1 50.548 50.548 3 0.0017629 16921 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.726 24.444 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8147 2759 7852 19015 21975 21975 1 GSEENLDETR Unmodified 1148.4946 0.49456007 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 0 13 0 1 32.181 32.181 2 2.3592E-08 7619 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 144.77 70.467 59.749 0 56.899 76.144 71.597 67.247 56 0 56 74 74 65 1 0 1 1 1 1 13086 8148 3276 7853 19016 21976 21976 1 GSEEVAETFR Unmodified 1123.5146 0.51456723 1443 Q8CBC8;P24288;E9Q4K3;B2KFA8;A0A0N4SV61 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 6.33 4.71 2 1 45.495 45.495 2;3 3.2477E-09 14732 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.34 108.78 138.25 213.94 328.03 202.16 407.24 373.21 130 213 324 204 407 361 2 3 4 3 3 4 27775 8149 1443 7854 19017;19018;19019 21977;21978;21979;21980 21978 4 GSEFSGK Unmodified 710.32352 0.32351898 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 6 0.816 1 1 1 39.433 39.433 2 0.026927 10357 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.046 53.166 295.28 277.63 468.24 351.69 273.39 238.44 278 287 464 352 278 231 2 3 3 3 2 2 43455 8150 644 7855 19020;19021;19022 21981;21982;21983 21982 3 GSEGDGQITAILDQK Unmodified 1530.7526 0.75256567 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 7.33 4.03 1 1 1 66.922 66.922 3 2.0995E-11 24004 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.45 75.455 168.57 164.46 111.45 202.41 159.2 302.47 158 167 112 194 167 288 2 3 2 3 2 3 26381 8151 3056 7856 19023;19024;19025 21984;21985;21986 21985 3 GSELESAMETLINVFHAHSGK Acetyl (Protein N-term) 2298.095 0.095045957 2732 Q91V77;D3YUT6 S100a1 Protein S100 yes no 1 0 0 0 8 0.816 1 1 1 101.77 101.77 3 5.6923E-30 36147 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.67 88.179 48.026 56.895 12.364 0 19.874 28.782 45 56 12 0 19 27 4 4 2 0 1 3 18733 8152 2732 7857 19026;19027;19028 21987;21988;21989;21990;21991 21991 5 GSELQNYFTK Unmodified 1185.5666 0.5666028 1694 P61222 Abce1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 0 8 0 2 62.922 62.922 2;3 0.018524 19963 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.102 37.031 50.183 16.368 27.786 28.618 17.552 29.347 47 19 28 28 19 28 1 1 1 1 1 1 1727.5 8153 1694 7858 19029;19030 21992;21993 21992 2 GSEPETPSEK Unmodified 1059.472 0.47203371 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 2.5 0.5 1 1 35.752 35.752 3 0.0011111 10009 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.841 46.114 89.895 46.934 0 39.196 66.189 0 84 46 0 37 65 0 2 1 0 1 1 0 9507.3 8154 573 7859 19031;19032 21994;21995 21995 2 GSEPSTEHSQK Unmodified 1185.5262 0.52619455 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 24.552 24.552 3 0.005898 4547 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.693 36.061 9.5993 0 9.6896 0 0 0 9 0 9 0 0 0 1 0 1 0 0 0 1842.5 8155 3449;3451 7860 19033 21996 21996 1 GSESPNSFLDQEYR Unmodified 1627.7114 0.71142914 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 3 0 1 56.57 56.57 3 0.036688 19675 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 36.059 23.893 0 20.216 0 0 0 39.442 0 19 0 0 0 37 0 1 0 0 0 1 3011 8156 2339 7861 19034 21997 21997 1 GSETLGGGGGGAAGTR Unmodified 1303.6117 0.61165551 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 0 7.4 4.59 1 2 2 32.118 32.118 2;3 1.6058E-45 7531 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 178.52 121.96 213.86 99.799 64.837 127.33 84.648 100.99 200 98 65 120 83 97 4 3 2 4 1 3 53105 8157 1497 7862 19035;19036;19037;19038;19039 21998;21999;22000;22001;22002 22001 5 GSFFISQVVLTPK Unmodified 1421.7919 0.79185171 1080 G3X9A7;Q8BLJ3 Plcxd3 PI-PLC X domain-containing protein 3 yes no 0 0 0 0 8.67 5.44 1 1 1 80.971 80.971 3 1.603E-07 22094 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.92 86.131 168.53 0 169.02 68.286 55.099 196.7 158 0 158 65 56 186 3 0 2 2 1 3 24968 8158 1080 7863 19040;19041;19042 22003;22004;22005 22004 3 GSFGELALMYNTPR Unmodified 1554.7501 0.75006325 1495;68 P31324;H3BK84;A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2b;Prkar2a cAMP-dependent protein kinase type II-beta regulatory subunit;cAMP-dependent protein kinase type II-alpha regulatory subunit no no 0 0 0 0 8.5 0.5 1 1 73.751 73.751 2;3 5.2204E-16 25061 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.54 94.714 0 34.048 80.068 29.923 94.767 33.079 0 32 74 28 93 32 0 1 1 1 2 1 15005 8159 1495;68 7864 19043;19044 22006;22007 22006 2 GSFMLGLETHDR Unmodified 1361.6398 0.63978452 1212 O35864 Cops5 COP9 signalosome complex subunit 5 yes yes 0 0 0 0 7 0 1 57.038 57.038 3 0.035052 17811 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.394 19.633 49.358 0 0 0 67.99 0 46 0 0 0 65 0 1 0 0 0 1 0 2256 8160 1212 7865 19045 22008 22008 1 GSFSEQGINEFLR Unmodified 1482.7103 0.71030693 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 6 0 1 69.634 69.634 2 0.00046769 24635 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.573 57.914 20.011 18.067 47.819 17.235 36.262 48.001 19 19 46 19 37 46 1 1 1 1 1 1 4723 8161 1933 7866 19046 22009 22009 1 GSFSEQGINEFLR Deamidation (N) 1483.6943 0.69432251 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 1 0 0 13 0 1 69.262 69.262 3 0.037215 25656 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.469 20.424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8162 1933 7866 19047 22010 22010 782 1 GSGEEPATPSR Unmodified 1086.4942 0.49416614 1552 P46061 Rangap1 Ran GTPase-activating protein 1 yes yes 0 0 0 0 1 0 1 27.644 27.644 2 4.7117E-06 5670 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.29 70.411 48.675 44.372 77.16 0 83.862 86.085 46 46 74 0 83 83 1 1 1 0 1 1 9079.7 8163 1552 7867 19048 22011 22011 1 GSGFQGTK Unmodified 780.37662 0.37661719 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 7.5 0.5 1 1 37.101 37.101 2 0.0049058 7833 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.71 40.336 217.12 154.95 166.28 84.615 194.61 281.2 204 162 158 79 199 269 2 2 1 1 2 2 19262 8164 2322 7868 19049;19050 22012;22013 22013 2 GSGGGSSGGSIGGR Unmodified 1091.4956 0.49556312 657 CON__P04264 yes yes 0 0 0 0 6.6 3.26 1 2 1 1 23.348 23.348 2;3 2.0242E-28 3995 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 153.25 81.211 128.97 83.695 93.213 28.411 80.376 58.201 121 88 94 29 80 56 3 3 4 2 4 2 19442 + 8165 657 7869 19051;19052;19053;19054;19055 22014;22015;22016;22017;22018 22014 5 GSGGSFSK Unmodified 725.33442 0.33441802 3229 Q9JKD3 Scamp5 Secretory carrier-associated membrane protein 5 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 37.051 37.051 2 0.0080447 8551 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.87 41.326 500.09 291.21 561.58 473.72 420.01 760.86 470 301 557 467 431 725 3 3 4 3 3 4 57645 8166 3229 7870 19056;19057;19058;19059 22019;22020;22021;22022 22020 4 GSGIQWDLR Unmodified 1030.5196 0.51959303 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 57.875 57.875 2 0.0044782 19117 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.67 46.603 98.915 176.56 241.47 184.03 200.97 115.22 93 176 241 185 204 111 1 2 2 2 2 1 33896 8167 2754 7871 19060;19061 22023;22024 22023 2 GSGIVTR Unmodified 688.38679 0.38678794 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;A0A338P7J0;Q3UD61;Q9WVP9;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Mx1;Mx2;Dnm1;Dnm3;Dnm2 Interferon-induced GTP-binding protein Mx2;Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 0 8 3.56 1 1 1 30.415 30.415 2 0.027046 6594 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.643 28.349 1064.3 769.53 1165.5 151.4 553.99 1029.9 1002 809 1131 153 559 981 3 3 3 1 2 3 210560 8168 118;1534;960;1082 7872 19062;19063;19064 22025;22026;22027 22025 3 GSGNLEAIHVIK Unmodified 1236.6826 0.68263561 1823 P80314;A0A1W2P7B7 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 6 0 1 53.335 53.335 3 0.0013698 16946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.185 34.33 0 98.952 0 90.719 0 99.138 0 93 0 83 0 93 0 1 0 1 0 1 8041.9 8169 1823 7873 19065 22028 22028 1 GSGSVDETLFALPAASEPVIPSSAEK Unmodified 2558.2752 0.27517839 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 6 0 1 82.323 82.323 4 7.9512E-06 30587 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.398 36.144 0 29.514 16.606 48.957 17.625 0 0 28 19 46 19 0 0 1 1 1 1 0 2068.7 8170 2886 7874 19066 22029 22029 1 GSGTAEVELK Unmodified 989.50294 0.50293991 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 0 6.33 3.25 1 1 1 1 1 1 47.005 47.005 2 7.3822E-09 14840 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.28 83.542 940.97 800.67 772.79 1004 894.71 1037.3 885 796 779 973 915 997 8 5 6 7 5 7 239760 8171 1609 7875 19067;19068;19069;19070;19071;19072 22030;22031;22032;22033;22034;22035;22036;22037 22031 8 GSGTAEVELKK Unmodified 1117.5979 0.59790293 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 1 8.14 3.14 1 2 2 2 44.969 44.969 3;4 3.3224E-08 13526 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.09 62.675 2458.8 2226.1 3054.6 2259.8 2449.8 3283.7 2315 2263 3051 2257 2538 3146 6 5 7 6 6 7 295720 8172 1609 7876 19073;19074;19075;19076;19077;19078;19079 22038;22039;22040;22041;22042;22043;22044 22044 7 GSGTESAPSDTDASLEVER Unmodified 1906.8392 0.83920843 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 1.5 0.5 1 1 45.421 45.421 3 3.4014E-14 13206 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 121.26 94.822 39.449 26.667 27.83 58.472 57.296 0 37 28 28 56 56 0 1 2 1 2 1 0 25391 8173 2323 7877 19080;19081 22045;22046 22045 2 GSHSQSSSPGALTLGR Unmodified 1540.7594 0.75938238 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7 1.41 1 1 1 1 1 35.74 35.74 3 1.4206E-41 8645 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 164.28 134.64 54.094 24.182 123.11 96.407 0 136.73 51 23 117 94 0 130 2 1 3 3 0 4 147530 8174 1282 7878 19082;19083;19084;19085;19086 22047;22048;22049;22050;22051;22052 22048 6 GSIFAVFDSIQSAK Unmodified 1468.7562 0.75619449 509 P32067;A2AR07 Ssb Lupus La protein homolog yes no 0 0 0 0 11 0.707 1 2 1 88.165 88.165 2;3 1.0136E-05 28155 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.03 81.793 89.214 63.455 180.63 154.21 179.35 65.536 84 65 176 148 177 65 2 1 3 3 3 2 22433 8175 509 7879 19087;19088;19089;19090 22053;22054;22055;22056 22055 4 GSIINISSIIGK Unmodified 1200.7078 0.70778773 1593 P50171;G3UX44 Hsd17b8;H2-Ke6 Estradiol 17-beta-dehydrogenase 8 yes no 0 0 0 0 11.5 0.5 1 1 80.689 80.689 2;3 0.00019 24910 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.185 48.786 0 67.944 0 0 55.592 86.892 0 65 0 0 56 83 0 2 0 0 1 1 17211 8176 1593 7880 19091;19092 22057;22058 22057 2 GSIPIFWSQRPNLK Unmodified 1641.8991 0.89911075 3160 Q9EP69 Sacm1l Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 1 12 0 1 68.512 68.512 4 6.7678E-05 17241 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.185 54.647 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 7911.6 8177 3160 7881 19093 22059 22059 1 GSIPTSLTALSLASASPPLSGR Unmodified 2082.1321 0.13208339 17 B8QI36;A0A087WPM2;A0A087WPJ3 Ppfia4 yes no 0 0 0 0 10 0 1 80.834 80.834 3 0.051303 25506 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 27.73 20.839 0 68.094 63.748 56.031 73.218 46.947 0 65 65 56 74 46 0 1 1 1 1 1 3276.8 8178 17 7882 19094 22060 22060 1 GSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR Unmodified 3713.8788 0.8788354 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.67 2.62 1 1 1 86.57 86.57 4 6.4779E-08 32451 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.01 36.382 9.657 0 0 9.837 0 9.594 9 0 0 9 0 9 1 0 0 1 0 1 10243 8179 1642 7883 19095;19096;19097 22061;22062;22063 22061 3 GSLALQPFLVGGHR Unmodified 1450.8045 0.80448208 2615 Q8K406 Lgi3 Leucine-rich repeat LGI family member 3 yes yes 0 0 0 0 10 0 1 64.263 64.263 3 0.0034979 17857 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.298 24.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8180 2615 7884 19098 22064 22064 1 GSLDYRPLTTADPIDEHR Unmodified 2055.0021 0.0021318501 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 1 5 0 1 53.387 53.387 4 0.0024058 17580 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.382 32.426 48.828 65.304 33.719 48.268 0 69.29 46 65 37 46 0 65 1 1 1 1 0 1 6520.1 8181 810 7885 19099 22065 22065 1 GSLFGGSVK Unmodified 850.45487 0.45486751 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 9.5 0.5 1 1 56.857 56.857 2 0.0042837 16438 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.308 34.141 156.79 70.536 279.29 151.35 99.74 99.138 148 74 269 148 102 93 2 1 2 1 1 1 14852 8182 3327 7886 19100;19101 22066;22067 22066 2 GSLGFYK Unmodified 770.39629 0.39629 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 10 0 1 56.522 56.522 2 0.051549 14385 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.134 26.11 361.77 233.15 314.92 299.48 338.99 297.33 340 247 318 297 347 288 1 1 1 1 1 1 30678 8183 2186 7887 19102 22068 22068 1 GSLIMHAK Unmodified 855.46366 0.46365805 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 9 0 1 43.529 43.529 3 0.018156 10185 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.531 25.721 147.69 126.04 138.86 72.606 0 0 139 130 139 74 0 0 1 1 1 1 0 0 6361.3 8184 3261 7888 19103 22069 22069 1 GSLLDFLK Unmodified 891.50657 0.50656873 1048;1535 F8WI90;P05480;F6UND7;A0A087WQ04;P25911;P08103;P39688;D3YZ57 Src;Hck;Lyn;Fyn Neuronal proto-oncogene tyrosine-protein kinase Src;Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lyn;Tyrosine-protein kinase HCK;Tyrosine-protein kinase Fyn no no 0 0 0 0 10.5 0.5 1 1 83.601 83.601 2 0.00053348 26070 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.04 50.354 0 98.952 0 71.045 0 0 0 93 0 65 0 0 0 1 0 1 0 0 13010 8185 1048;1535 7889 19104;19105 22070;22071 22071 2 GSLLIDSSTIDPSVSK Unmodified 1617.8461 0.8461317 2852 Q99L13 Hibadh 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 6 0 1 70.707 70.707 3 0.00030829 25118 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.159 29.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8186 2852 7890 19106 22072 22072 1 GSLNPGK Unmodified 671.36024 0.36023884 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 38.124 38.124 2 0.011135 8106 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.62 57.904 601.8 435.09 378.24 493.97 538.97 458.17 565 453 380 475 552 439 4 4 3 3 4 3 145840 8187 1055 7891 19107;19108;19109;19110 22073;22074;22075;22076 22075 4 GSLPPAALEPQTTVIHNPVDGIK Unmodified 2353.2642 0.2641602 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 7.83 2.41 2 2 1 1 67.975 67.975 3;4 4.4594E-16 23768 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.308 76.436 267.74 331.93 482.87 450.56 524.98 614.64 251 324 472 435 528 584 5 6 7 7 6 6 51798 8188 1475 7892 19111;19112;19113;19114;19115;19116 22077;22078;22079;22080;22081;22082;22083;22084;22085 22077 9 GSLSGWILSK Unmodified 1046.576 0.57604528 1523 P35564 Canx Calnexin yes yes 0 0 0 0 11 0.816 1 1 1 74.171 74.171 2;3 6.1466E-05 22444 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.79 40.663 79.402 0 48.098 37.574 0 197.21 74 0 46 37 0 185 1 0 1 1 0 2 31713 8189 1523 7893 19117;19118;19119 22086;22087;22088 22086 3 GSLTFEPLTLVPIQTK Unmodified 1742.9818 0.98183733 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 10 1.87 1 1 1 1 87.7 87.7 3 5.7726E-06 34527 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.562 56.623 69.516 0 95.805 116.75 0 88.478 65 0 93 111 0 83 2 0 3 3 0 2 26965 8190 1967 7894 19120;19121;19122;19123 22089;22090;22091;22092 22092 4 GSMAGSTGVHDTVVNQLLSK Unmodified 1999.9997 0.99968901 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8 0.707 1 2 1 64.325 64.325 3;4 3.7395E-13 20597 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.82 85.023 98.191 95.639 49.525 50.516 45.439 126.62 92 93 46 47 46 120 2 3 1 2 1 3 19022 8191 1554 7895 19124;19125;19126;19127 22093;22094;22095;22096 22094 4 GSNDAYHSR Deamidation (N) 1006.4104 0.41043651 1430 P21460;A2APX3 Cst3 Cystatin-C yes no 0 1 0 0 1.5 0.5 1 1 19.82 19.82 3 0.0020252 2978 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.095 68.454 5.365 32.603 22.786 42.826 33.454 39.553 5 31 24 41 34 38 1 2 2 3 2 3 3329.6 8192 1430 7896 19128;19129 22097;22098;22099 22097 528 3 GSNDAYHSR Unmodified 1005.4264 0.42642093 1430 P21460;A2APX3 Cst3 Cystatin-C yes no 0 0 0 0 3.5 1.12 1 1 1 1 17.35 17.35 3 3.8709E-06 2421 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 147.78 82.532 34.104 25.729 28.796 21.994 58.448 35.214 32 26 28 21 58 34 3 2 3 3 6 4 21131 8193 1430 7896 19130;19131;19132;19133 22100;22101;22102;22103;22104;22105 22103 6 GSNDMQYQHVIETLIGK Unmodified 1931.9411 0.9411115 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 8 0 1 78.433 78.433 4 0.0064797 27270 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.962 21.639 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 3677.7 8194 1825 7897 19134 22106 22106 1 GSNMDFREPTEEER Unmodified 1695.7159 0.71586259 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 1 3 0 1 41.436 41.436 3 0.00022821 12689 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.758 49.199 59.245 43.193 105.03 54.948 0 0 56 46 102 56 0 0 1 1 1 1 0 0 10490 8195 3333 7898 19135 22107 22107 1 GSNTCELVFEDCKVPAANVLSQESK Deamidation (N) 2782.279 0.27895992 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 1 0 1 5 0 1 69.668 69.668 4 7.5761E-07 25167 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.526 42.119 0 39.368 0 29.902 37.328 0 0 37 0 28 37 0 0 1 0 1 1 0 5328 8196 3202 7899 19136 22108 22108 1102 1 GSNTELTVR Unmodified 975.49852 0.49852324 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 7.33 4.03 1 1 1 36.404 36.404 2 0.00335 9464 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.16 51.424 0 48.029 54.729 66.936 130.26 46.604 0 46 56 65 129 46 0 1 1 1 2 1 11310 8197 1180 7900 19137;19138;19139 22109;22110;22111 22111 3 GSPAVDVAVK Unmodified 941.5182 0.51819605 1319 P07309 Ttr Transthyretin yes yes 0 0 0 0 6 1 1 1 50.48 50.48 2 0.0018429 16204 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.496 37.15 79.944 46.934 49.519 30.604 47.137 58.351 75 46 46 28 46 56 2 1 1 1 1 2 4308.5 8198 1319 7901 19140;19141 22112;22113 22112 2 GSPCDTLASSTEK Unmodified 1351.5926 0.59255956 1811 P70365;A0A1W2P6K7 Ncoa1 Nuclear receptor coactivator 1 yes no 0 0 0 0 1 0 1 34.435 34.435 2 0.057157 8723 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 44.309 1.9735 88.556 62.663 31.427 98.79 52.405 47.541 83 65 37 93 56 46 1 1 1 1 1 1 11462 8199 1811 7902 19142 22114 22114 1 GSPIVQEPEEASEPKEESSPR Unmodified 2281.071 0.070999276 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 3 0 1 46.118 46.118 4 0.00030864 14854 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.592 31.436 39.516 36.703 0 30.604 0 0 37 37 0 28 0 0 1 1 0 1 0 0 4248.5 8200 3449;3451 7903 19143 22115 22115 1 GSPLVVISQGK Unmodified 1083.6288 0.62880913 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 8.88 3.37 1 2 1 1 2 1 61.464 61.464 2;3 4.1891E-16 16093 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 164.97 114.84 2818.9 2873.3 3669.8 3577.5 4014.1 4018.6 2653 2922 3701 3534 4072 3870 6 10 10 10 9 8 951720 8201 1158 7904 19144;19145;19146;19147;19148;19149;19150;19151 22116;22117;22118;22119;22120;22121;22122;22123;22124;22125;22126;22127;22128 22125 13 GSPMEISLPIALSK Unmodified 1441.7851 0.78505177 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 8 0 1 81.885 81.885 3 0.005143 28876 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.112 32.846 60.088 0 0 0 56.251 67.685 56 0 0 0 56 65 1 0 0 0 1 1 7667.8 8202 1446 7905 19152 22129 22129 1 GSPQQIDHAK Unmodified 1079.536 0.53597137 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 5 0 1 32.593 32.593 3 0.0019532 7646 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.595 37.639 0 29.792 0 49.618 35.103 38.44 0 28 0 46 37 37 0 1 0 1 1 1 6094.2 8203 1952 7906 19153 22130 22130 1 GSPSTVSSSYK Unmodified 1098.5193 0.51931826 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.67 3.09 1 1 1 40.205 40.205 2 6.9722E-13 10888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.99 101.59 167.42 120.41 177.55 132.28 149.78 59.696 157 120 177 130 149 56 2 2 3 2 2 1 20632 8204 154 7907 19154;19155;19156 22131;22132;22133 22131 3 GSRPYNQR Unmodified 976.48388 0.48387622 284 A0A1D5RMD2;Q9DCU2 Pllp Plasmolipin yes no 0 0 0 1 6.5 1.12 1 1 1 1 18.035 18.035 3 0.0018666 2844 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.31 56.83 6.3795 21.602 22.773 17.611 37.511 41.57 6 21 23 18 38 40 1 2 3 3 3 3 6968.2 8205 284 7908 19157;19158;19159;19160 22134;22135;22136;22137 22136 4 GSSAGFDR Unmodified 795.35113 0.35113072 3256 Q9QUM9;E0CYT2 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 0 5.5 0.5 1 1 29.874 29.874 2 0.010729 6386 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.311 43.144 98.818 80.055 95.325 0 112.81 95.919 93 83 93 0 111 93 1 1 1 0 1 1 8000.2 8206 3256 7909 19161;19162 22138;22139 22138 2 GSSAGFLTLHNAFPK Unmodified 1545.794 0.79397698 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 10 0.816 1 1 1 63.513 63.513 3;4 3.4429E-05 17474 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.797 67.359 95.742 0 228.89 97.475 129.9 226.55 90 0 216 99 133 216 1 0 2 1 1 2 28844 8207 1025 7910 19163;19164;19165 22140;22141;22142 22141 3 GSSCFPVDTTGFSLHSAIYAARPDVR Unmodified 2810.3446 0.34461214 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 1 8 0 1 66.961 66.961 4 3.0626E-11 21889 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.138 44.578 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 6379.2 8208 3275 7911 19166 22143 22143 1 GSSDFCVK Unmodified 898.38547 0.38546731 1040 F8WGT1;Q68FL4;F8WI65;H3BL31;D3YYM7;D3YX97 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 0 0 0 0 7 0 1 47.571 47.571 2 0.046045 13359 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.246 5.2271 34.109 0 38.162 38.167 0 59.696 32 0 37 37 0 56 1 0 1 1 0 1 4555.2 8209 1040 7912 19167 22144 22144 1 GSSEASPSR Unmodified 876.39372 0.39372381 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 2.5 0.5 1 1 18.801 18.801 2 0.007815 2900 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.149 39.911 12.818 0 33.714 18.977 19.002 0 12 0 32 19 19 0 1 0 2 1 1 0 4329.1 8210 1025 7913 19168;19169 22145;22146 22145 2 GSSEPDTEIQSGGGTEVYVLAK Unmodified 2223.0543 0.05428658 2224 Q6P6I8;E0CYM8 Sirpa yes no 0 0 0 0 4.5 0.5 1 1 65.557 65.557 3 4.6629E-16 23382 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.131 79.053 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 4546.8 8211 2224 7914 19170;19171 22147;22148 22147 2 GSSEPDTEIQSGGGTEVYVLAKPSPPEVSGPADR Unmodified 3412.627 0.62703739 2224 Q6P6I8;E0CYM8 Sirpa yes no 0 0 0 1 4.5 0.5 1 1 65.247 65.247 4 2.3764E-14 23095 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.302 55.642 69.452 0 49.232 28.55 46.505 39.181 65 0 47 28 47 38 2 0 2 1 2 2 9389.7 8212 2224 7915 19172;19173 22149;22150 22150 2 GSSGCVER Unmodified 850.36032 0.3603152 751 D3Z158;Q8BML9;A0A140LII8;A0A140LIR0;A0A140LJH2;A0A0A6YY08;A0A140LID3;A0A140LIN2 Qars yes no 0 0 0 0 3 0 1 20.535 20.535 2 0.021985 3216 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.072 32.305 0 14.763 7.9638 19.945 18.463 14.397 0 14 9 19 19 14 0 1 1 1 1 1 1479.7 8213 751 7916 19174 22151 22151 1 GSSGPPVYVDLAYIPNHCSGK Unmodified 2217.0525 0.052452861 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7 0 2 65.425 65.425 3;4 5.7402E-15 21800 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.461 70.297 138.43 54.35 132.21 100.88 144.9 153.63 130 56 130 102 148 148 2 1 2 2 2 2 6006.4 8214 510 7917 19175;19176 22152;22153;22154 22154 3 GSSGSSTVQR Unmodified 964.45739 0.4573867 2373 Q8BGB5 Limd2 LIM domain-containing protein 2 yes yes 0 0 0 0 4 0 1 19.025 19.025 2 6.8241E-05 2688 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.6 45.839 0 0 0 0 15 0 0 0 0 0 15 0 0 0 0 0 1 0 1397.9 8215 2373 7918 19177 22155 22155 1 GSSHQVEYEILFPGCVLR Unmodified 2090.0255 0.025509829 2824 Q99J08;Q5SQ27 Sec14l2;Sec14l3 SEC14-like protein 2 yes no 0 0 0 0 6 0 1 70.691 70.691 3 0.00011311 25156 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.368 28.502 0 29.366 25.466 68.884 34.217 38.466 0 28 28 65 37 37 0 1 1 1 1 1 5002.1 8216 2824 7919 19178 22156 22156 1 GSSLADQR Unmodified 832.40389 0.40389457 1277 Q3UDC3;O88746 Tom1 Target of Myb protein 1 yes no 0 0 0 0 4.5 0.5 1 1 28 28 2 0.0093782 5983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.39 57.267 30.044 0 46.292 78.123 28.291 98.331 28 0 46 74 28 93 1 0 1 1 1 2 8004.6 8217 1277 7920 19179;19180 22157;22158 22157 2 GSSLGGLQQTVTAR Unmodified 1373.7263 0.72629134 568 B0V2N1;A0A286YEA4 Ptprs Receptor-type tyrosine-protein phosphatase S yes no 0 0 0 0 7 0 1 50.386 50.386 2 0.0090963 14681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.237 23.253 0 9.576 0 0 38.702 0 0 9 0 0 37 0 0 1 0 0 1 0 3134.9 8218 568 7921 19181 22159 22159 1 GSSNFCVK Unmodified 897.40145 0.40145173 2298 Q80SW1;D3Z2Q0;F7ATQ6 Ahcyl1 Putative adenosylhomocysteinase 2 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 44.926 44.926 2 0.0096556 12280 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.431 49.148 156.48 203.35 252.51 364.79 434.71 346.84 148 205 252 355 443 337 1 2 1 3 3 3 29225 8219 2298 7922 19182;19183;19184;19185;19186 22160;22161;22162;22163;22164 22161 5 GSSQPNLSTSYSEQEYGK Unmodified 1960.865 0.86502925 2549 Q8CHU3 Epn2 Epsin-2 no no 0 0 0 0 4 0 1 51.144 51.144 3 0.0016249 16773 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.946 23.007 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 2092.2 8220 2549 7923 19187 22165 22165 1 GSSTEDGPGVPPPSPR Unmodified 1535.7216 0.72159989 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 2 0 1 39.279 39.279 3 0.022773 11401 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 36.345 21.314 0 9.4227 9.1727 0 19.564 9.0357 0 9 9 0 19 9 0 1 1 0 1 1 1675 8221 732 7924 19188 22166 22166 1 GSSTIATAAADKIPGLLGVFQK Unmodified 2144.1841 0.18411896 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 1 11.3 0.471 2 1 85.63 85.63 3;4 4.5708E-16 23984 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.21 84.617 37 25 93 0 0 0 37 25 93 0 0 0 1 1 1 0 0 0 15919 8222 3186 7925 19189;19190;19191 22167;22168;22169 22169 3 GSSVDSATK Unmodified 850.40323 0.40322587 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R1U2;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5 0.816 1 1 1 32.931 32.931 2 0.00087446 7739 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.8 58.252 59.76 133.83 27.245 128.39 119.02 86.148 56 130 28 121 120 84 1 3 1 2 1 2 9966.6 8223 3449;3451;3452 7926 19192;19193;19194 22170;22171;22172 22171 3 GSTAAQLSK Unmodified 861.4556 0.45559579 3035 Q9D154;Z4YK03;Q5SV42;Q8VHP7 Serpinb1a;Serpinb1c;Serpinb1b Leukocyte elastase inhibitor A;Leukocyte elastase inhibitor C;Leukocyte elastase inhibitor B yes no 0 0 0 0 7 0 1 39.397 39.397 2 0.012353 9635 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.434 21.368 0 39.368 0 20.767 0 59.696 0 37 0 19 0 56 0 1 0 1 0 1 3994.5 8224 3035 7927 19195 22173 22173 1 GSTAPVGGGSFPTITPR Unmodified 1600.8209 0.82092001 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 7 0 1 58.24 58.24 2 2.4246E-05 18456 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.153 47.167 0 0 39.213 18.43 0 29.848 0 0 37 19 0 28 0 0 1 1 0 1 2625.4 8225 1933 7928 19196 22174 22174 1 GSTASQVLQR Unmodified 1045.5516 0.55162144 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 8.67 3.09 1 1 1 37.429 37.429 2 7.8493E-09 9898 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.81 70.093 168.6 62.785 103.8 145.74 0 69.29 158 65 102 139 0 65 2 1 1 2 0 1 32443 8226 2715 7929 19197;19198;19199 22175;22176;22177 22177 3 GSTAVGVR Unmodified 745.40825 0.40825167 3399 Q9Z2U0;A0A338P7D7 Psma7 Proteasome subunit alpha type-7 yes no 0 0 0 0 6 0 1 29.15 29.15 2 0.012034 5621 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.41 45.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8227 3399 7930 19200 22178 22178 1 GSTDNLMDDIER Unmodified 1364.5878 0.58780853 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 2.5 0.957 1 2 2 1 58.781 58.781 2;3 2.054E-11 20643 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.86 54.784 89.568 53.703 105.17 28.826 56.581 67.675 84 55 103 28 56 65 3 2 4 2 1 2 34619 8228 1543 7931 19201;19202;19203;19204;19205;19206 22179;22180;22181;22182;22183;22184 22183 6 GSTDTDIEELENATYK Acetyl (Protein N-term) 1826.8058 0.80578303 2451 Q8BRR9 Pde1a yes yes 1 0 0 0 2.5 0.5 1 1 77.007 77.007 2 5.1307E-67 27529 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.353 79.608 12.769 6.3774 12.537 9 12.552 0 12 7 12 9 12 0 1 1 1 1 1 0 5928 8229 2451 7932 19207;19208 22185;22186 22185 2 GSTESCNTTTEDEDLK Unmodified 1785.7211 0.72106713 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 1.5 0.5 1 1 42.387 42.387 3 3.6694E-38 11978 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.71 100.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8230 2818 7933 19209;19210 22187;22188 22187 2 GSTFLPLK Unmodified 861.496 0.49600404 964 E9QN12;E9QPE2 Pdgfrb Platelet-derived growth factor receptor beta yes no 0 0 0 0 9 0 1 62.115 62.115 2 0.046558 18869 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.038 0.77327 0 0 120.1 0 0 108.73 0 0 111 0 0 102 0 0 1 0 0 1 5937.9 8231 964 7934 19211 22189 22189 1 GSTNLEGK Unmodified 804.39775 0.39774656 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 5.5 0.5 1 1 37.657 37.657 2 0.007574 10024 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.1 65.455 68.981 122.71 82.949 122.73 185.57 66.942 65 121 83 120 185 65 1 2 1 2 2 1 8282.4 8232 2306 7935 19212;19213 22190;22191 22190 2 GSTNLGVNQAGFTLHSAVYAARPDAK Unmodified 2644.3358 0.33576201 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3 Add1 Alpha-adducin yes no 0 0 0 1 6 3.56 1 1 1 58.245 58.245 4 6.9737E-23 17008 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.583 77.122 144.02 88.619 65.176 46.968 62.493 97.922 135 92 65 46 61 93 3 2 2 1 2 2 23090 8233 3276 7936 19214;19215;19216 22192;22193;22194 22194 3 GSTPTSPYSVPQIAPLPSSTLCPICK Unmodified 2757.3717 0.37173809 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8 0 1 78.831 78.831 5 5.9259E-05 27466 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.371 33.64 49.358 0 0 0 0 69.29 46 0 0 0 0 65 1 0 0 0 0 1 3490.8 8234 1275 7937 19217 22195 22195 1 GSTSPDLLMHQGPPDTAEIIK Unmodified 2206.094 0.093983325 2947 Q9CQX8;Q9D6T9 Mrps36 28S ribosomal protein S36, mitochondrial yes no 0 0 0 0 5 0 1 65.486 65.486 4 1.0089E-08 23266 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.421 43.285 39.174 35.753 58.249 0 0 69.29 37 37 56 0 0 65 1 1 1 0 0 1 3392.2 8235 2947 7938 19218 22196 22196 1 GSVAEAEDCYNTALR Unmodified 1654.7257 0.72569899 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 3.5 0.5 1 1 52.76 52.76 3 2.9653E-11 17923 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.08 68.554 20.387 0 0 40.324 6.2132 39.265 19 0 0 37 9 37 1 0 0 1 1 1 6366.1 8236 2543 7939 19219;19220 22197;22198 22197 2 GSVAGGAVYLVYDQELLGPSDK Unmodified 2237.1216 0.12157828 2662 Q8R404 Qil1 Protein QIL1 yes yes 0 0 0 0 6 0 1 82.015 82.015 4 0.0029313 30396 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.647 30.364 39.368 36.291 25.261 59.702 0 0 37 37 28 56 0 0 1 1 1 1 0 0 3822.6 8237 2662 7940 19221 22199 22199 1 GSVCNVLLTSCHDGVCR Unmodified 1932.8604 0.86043511 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7 0 1 51.941 51.941 3 2.0097E-06 15441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.05 91.891 19.948 17.89 58.679 16.581 36.622 38.397 19 19 56 19 37 37 1 1 1 1 1 1 3583.7 8238 570 7941 19222 22200 22200 1 GSVLPNSDKK Unmodified 1043.5611 0.56112349 1501 P32020 Scp2 Non-specific lipid-transfer protein yes yes 0 0 0 1 8 0 1 42.334 42.334 3 0.056905 10286 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.973 8.8608 0 78.736 0 0 45.451 77.587 0 74 0 0 46 74 0 1 0 0 1 1 3733.1 8239 1501 7942 19223 22201 22201 1 GSVNMDLD Unmodified 849.35383 0.35383283 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 4 0 1 57.028 57.028 2 0.059689 19567 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.76 50.346 0 0 59.425 26.198 45.932 28.537 0 0 56 28 46 28 0 0 1 1 1 1 4007.6 8240 2137 7943 19224 22202 22202 1 GSVNMPFMDFLTK Unmodified 1485.6996 0.69960758 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 9.5 0.5 1 1 90.361 90.361 3 0.0018037 29325 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.648 38.848 0 20.216 0 0 38.702 0 0 19 0 0 37 0 0 1 0 0 1 0 2876.7 8241 1608 7944 19225;19226 22203;22204 22204 2 GSVPLFWEQPGLQVGSHR Unmodified 1993.017 0.016994053 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 8 1 1 1 70.38 70.38 3 0.0011705 22931 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.494 27.661 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 26880 8242 927 7945 19227;19228 22205;22206 22206 2 GSVPYDAELSFALR Unmodified 1523.762 0.76200815 481 A2AKD7;Q61234 Snta1 Alpha-1-syntrophin yes no 0 0 0 0 13 0 1 73.455 73.455 2 0.0061143 27693 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.034 25.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8243 481 7946 19229 22207 22207 1 GSVSEDELIAAIK Unmodified 1330.698 0.6980109 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 7 3.54 1 1 1 1 72.786 72.786 3 5.9431E-05 26641 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.401 64.963 118.64 44.256 89.082 48.49 152.63 29.041 111 46 84 46 149 28 2 1 3 1 3 1 30719 8244 2583 7947 19230;19231;19232;19233 22208;22209;22210;22211 22209 4 GSVSSYDR Unmodified 869.38791 0.38791015 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 30.604 30.604 2 0.0010168 7095 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.58 92.427 413.35 276.79 493.5 312.33 392.84 485.47 389 286 484 310 394 464 4 3 4 3 3 3 148210 8245 2133 7948 19234;19235;19236;19237;19238 22212;22213;22214;22215;22216 22213 5 GSVTYIAPPGNYDASDVVLELEFEGVK Unmodified 2868.4069 0.40692085 1596 P50516;D3Z1B9 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 5.5 0.5 2 2 93.29 93.29 3;4 1.1654E-11 35067 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.1 44.157 29.986 6.2275 19.054 40.441 17.552 39.442 28 6 18 37 17 37 2 1 2 1 2 1 21417 8246 1596 7949 19239;19240;19241;19242 22217;22218;22219;22220 22218 4 GSWPEGAER Unmodified 987.44101 0.44100836 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4 0 1 40.626 40.626 2 0.0003301 11852 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.12 70.944 79.402 0 0 0 111.13 145 74 0 0 0 111 139 1 0 0 0 1 1 10337 8247 510 7950 19243 22221 22221 1 GSYGDLGGPIITTQVTIPK Unmodified 1916.0255 0.025493054 613 B2M1R6;P61979;H3BLL4;H3BLP7 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 8.6 2.24 2 2 1 75.906 75.906 2;3;4 3.2488E-08 28680 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.148 52.749 118.88 185.99 271.77 169.01 118.66 174.64 112 186 269 167 120 167 2 4 5 4 2 3 47289 8248 613 7951 19244;19245;19246;19247;19248 22222;22223;22224;22225;22226;22227;22228 22228 7 GSYHTNEPK Unmodified 1031.4672 0.46722311 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 5 0 1 28.925 28.925 3 0.0041938 5929 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.816 36.701 0 0 0 29.94 35.311 58.688 0 0 0 28 37 56 0 0 0 1 1 1 1736.5 8249 1226 7952 19249 22229 22229 1 GSYLTHEASGLDEQGEAR Unmodified 1918.8657 0.86569795 2663 Q8R464 Cadm4 Cell adhesion molecule 4 yes yes 0 0 0 0 3.5 0.5 1 1 45.401 45.401 3 4.7357E-07 14005 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.422 77.643 50.262 0 28.419 59.158 18.936 0 47 0 28 56 19 0 2 0 1 2 1 0 6230.3 8250 2663 7953 19250;19251 22230;22231 22231 2 GSYMEVEDNR Unmodified 1198.4925 0.49245158 194 A0A0R4J0Z3;P55088 Aqp4 Aquaporin-4 yes no 0 0 0 0 3 0 1 42.803 42.803 2 2.7903E-05 13289 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.48 74.602 59.657 34.625 43.066 0 64.502 101.56 56 37 42 0 65 97 1 1 1 0 1 1 7840.1 8251 194 7954 19252 22232 22232 1 GSYSLSHVYTPNDVR Unmodified 1693.806 0.80599822 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 7 0 1 49.339 49.339 3 0.024517 14104 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.657 32.578 60.088 0 0 60.189 54.18 47.49 56 0 0 56 56 46 1 0 0 1 1 1 2907.8 8252 1420 7955 19253 22233 22233 1 GTAANPEPANR Unmodified 1096.5261 0.52613497 2312 Q80U49;B9EIX2 Cep170b Centrosomal protein of 170 kDa protein B yes no 0 0 0 0 3 0 1 26.008 26.008 2 0.001854 5543 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.862 50.599 29.729 17.576 38.005 18.502 0 20.254 28 19 37 19 0 19 1 1 1 1 0 1 1925.6 8253 2312 7956 19254 22234 22234 1 GTADVTR Unmodified 718.36097 0.36096712 1406 P17809 Slc2a1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 0 0 0 0 3 0 1 25.077 25.077 2 0.027217 5124 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.187 26.049 108.73 70.387 60.839 105.94 101.83 0 102 74 65 102 102 0 1 1 1 1 1 0 6879.2 8254 1406 7957 19255 22235 22235 1 GTAFGGWK Unmodified 822.40244 0.40243801 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 10 1 1 1 57.582 57.582 2 0.025124 16797 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.213 25.498 436.09 310.58 382.65 474.28 593.16 551.25 410 318 388 465 606 533 2 1 1 2 2 2 38940 8255 1474 7958 19256;19257 22236;22237 22236 2 GTAGVVPVVPGEVEVVK Unmodified 1634.9243 0.92432245 769 D3Z3G6;Q63844;A0A0U1RPX4 Mapk3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 0 5.5 0.5 1 1 70.822 70.822 3 5.0799E-07 25818 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.53 82.151 79.182 82.179 47.458 129.86 125.05 144.61 74 83 46 120 130 139 1 2 1 1 2 2 19874 8256 769 7959 19258;19259 22238;22239 22238 2 GTAPSDNR Unmodified 816.37259 0.37259444 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 2.5 0.5 1 1 19.377 19.377 2 5.708E-05 3016 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 160.54 73.254 39.283 67.574 13.057 58.783 87.566 58.263 37 66 14 56 88 57 3 2 1 2 2 3 15484 8257 3000 7960 19260;19261 22240;22241;22242 22240 3 GTAQQPR Unmodified 756.38785 0.38785057 941 P63082;E9Q9C5 Atp6v0c V-type proton ATPase 16 kDa proteolipid subunit yes no 0 0 0 0 4.5 0.5 1 1 17.947 17.947 2 0.0060171 2533 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.12 57.732 20.11 68.294 19.976 41.517 53.824 21.916 19 68 22 40 54 22 1 2 1 1 1 1 22408 8258 941 7961 19262;19263 22243;22244 22244 2 GTAVVNGEFK Deamidation (N) 1021.508 0.50802529 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 1 0 0 7 3.54 1 1 1 1 52.743 52.743 2;3 0.0016861 17207 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.507 32.026 136.69 184.68 239.42 0 192.91 136.46 129 186 231 0 186 129 3 4 3 0 3 2 27538 8259 1422 7962 19264;19265;19266;19267 22245;22246;22247;22248 22246 521 4 GTAVVNGEFK Unmodified 1020.524 0.52400971 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 50.684 50.684 2 0.0012268 15858 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.937 43.654 39.701 48.022 55.175 56.923 138.52 123.97 37 46 56 56 139 120 1 1 1 1 2 2 8117.7 8260 1422 7962 19268;19269 22249;22250 22249 2 GTAYTFFTPGNLK Unmodified 1415.7085 0.70851601 1963 Q501J6;Q3U741 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 10 0 1 72.733 72.733 2 5.0174E-11 21845 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.69 93.604 20.292 18.848 0 39.95 26.124 38.697 19 19 0 37 28 37 1 1 0 1 1 1 3099.4 8261 1963 7963 19270 22251 22251 1 GTCPCDTR Unmodified 965.3695 0.36949967 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 3.5 0.5 1 1 23.334 23.334 2 0.011497 4037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.195 65.089 49.241 0 19.629 39.316 55.724 0 46 0 19 38 55 0 2 0 1 2 2 0 7412.4 8262 882 7964 19271;19272 22252;22253 22253 2 GTDELYAVK Unmodified 994.49713 0.49712625 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 5.5 0.5 1 1 54.885 54.885 2 0.0060421 18279 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.548 35.39 0 0 49.772 0 0 108.73 0 0 46 0 0 102 0 0 1 0 0 1 3634.2 8263 1796 7965 19273;19274 22254;22255 22254 2 GTDNITVR Unmodified 874.45084 0.45084476 13 Q3TYE5;A0A087WP80;Q8BLK3;A0A087WP06 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 4 0 1 35.894 35.894 2 0.014634 9683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.064 16.642 48.955 35.437 37.661 0 38.702 0 46 37 37 0 37 0 1 1 1 0 1 0 10879 8264 13 7966 19275 22256 22256 1 GTDTVAGIALIK Unmodified 1157.6656 0.66558856 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 7.5 0.5 1 1 69.387 69.387 2;3 1.6859E-05 22981 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.65 49.164 78.887 0 86.557 64.003 100.12 105.88 74 0 83 65 102 102 2 0 2 2 2 2 4613.6 8265 2848 7967 19276;19277 22257;22258 22258 2 GTDYQLSK Unmodified 910.43961 0.43961137 432 Q91WQ3;A2A7S7;F6VXZ2 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 5 0 1 46.064 46.064 2 0.039524 14099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.897 10.794 0 0 37.895 48.019 0 29.848 0 0 37 46 0 28 0 0 1 1 0 1 2414.1 8266 432 7968 19278 22259 22259 1 GTEAVVK Unmodified 702.3912 0.39120462 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 9.5 3.5 1 1 39.098 39.098 2 0.027165 10205 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.626 21.359 0 67.46 101.71 103.42 106.7 135.54 0 65 102 102 111 130 0 1 1 1 1 1 13056 8267 1042 7969 19279;19280 22260;22261 22260 2 GTEELYAIK Unmodified 1022.5284 0.52842638 2030;1425 P20444;Q4VA93 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 5.67 0.471 1 2 58.669 58.669 2;3 0.001615 19404 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.02 43.606 217.5 162.46 97.04 100.64 127.23 213.83 204 168 93 93 130 204 3 3 1 2 2 3 18050 8268 1425;2030 7970 19281;19282;19283 22262;22263;22264 22264 3 GTESTQDACAK Unmodified 1166.4874 0.4873662 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R2E3;A0A140T8U6;S4R2M2;P59672;Q3UHP6;S4R1W3 Anks1b;Anks1a;Anks1 Ankyrin repeat and sterile alpha motif domain-containing protein 1B;Ankyrin repeat and SAM domain-containing protein 1A yes no 0 0 0 0 3.5 0.5 1 1 32.128 32.128 2 2.0873E-08 8399 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.46 73.14 0 9.576 0 0 19.564 9.0357 0 9 0 0 19 9 0 1 0 0 1 1 2795 8269 3447 7971 19284;19285 22265;22266 22265 2 GTFASLSELHCDK Unmodified 1463.6715 0.67147858 562;1299 A8DUK4;P02088;E9Q223;P02089 Hbbt1;Hbb-b1;Hbb-bs;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 0 0 0 8.6 2.42 1 1 1 1 1 56.46 56.46 2;3 2.3477E-21 17638 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 153.81 114.38 480.04 423.62 417.28 501.78 967.09 801.75 451 428 414 488 963 778 3 2 3 3 4 5 224900 8270 562;1299 7972 19286;19287;19288;19289;19290 22267;22268;22269;22270;22271;22272 22268 6 GTFASLSELHCDKLHVDPENFR Unmodified 2571.2176 0.21762071 562;1299 A8DUK4;P02088;P02089 Hbbt1;Hbb-b1;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 0 0 1 7 0.816 1 1 1 65.04 65.04 5 1.2731E-11 22440 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.145 61.438 107.77 265.4 237.6 150.27 186.17 133.27 102 260 241 148 186 130 2 3 3 2 2 2 64336 8271 562;1299 7973 19291;19292;19293 22273;22274;22275 22273 3 GTFCSFDTPDEAIR Unmodified 1614.6984 0.69842161 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 6.8 3.19 1 1 2 1 62.279 62.279 2;3 1.2082E-40 22083 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.93 163.27 138.8 83.007 63.519 148.24 290.12 95.238 130 84 65 140 287 93 4 3 2 4 5 3 36538 8272 1702 7974 19294;19295;19296;19297;19298 22276;22277;22278;22279;22280 22280 5 GTFDIYVK Unmodified 941.48583 0.48583328 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 8 0 1 64.893 64.893 2 0.010684 20872 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.492 36.341 177.36 122.97 202.72 0 0 157.77 167 130 195 0 0 148 1 1 1 0 0 1 10610 8273 1495 7975 19299 22281 22281 1 GTFDNAETK Unmodified 981.44034 0.44033966 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5 0 1 42.53 42.53 2 0.049725 12309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.013 18.368 29.936 0 18.216 49.192 0 59.696 28 0 19 46 0 56 1 0 1 1 0 1 3089 8274 3204 7976 19300 22282 22282 1 GTFLSTTLK Unmodified 966.5386 0.53859714 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1;A0A140LHL1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 10 0 1 63.21 63.21 2 0.0013928 17460 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.62 56.649 59.375 0 119.8 0 66.371 47.142 56 0 111 0 65 46 1 0 1 0 1 1 5765.5 8275 87 7977 19301 22283 22283 1 GTFLSTTLKK Unmodified 1094.6336 0.63356015 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1;A0A140LHL1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 1 12 0 1 57.534 57.534 3 2.974E-05 13194 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.42 81.406 118.29 0 136 91.32 60.12 107.02 111 0 130 92 65 102 1 0 1 1 1 1 5785.6 8276 87 7978 19302 22284 22284 1 GTFLVTQAAAQALVSSGGR Unmodified 1832.9745 0.97446054 1593 P50171;G3UX44 Hsd17b8;H2-Ke6 Estradiol 17-beta-dehydrogenase 8 yes no 0 0 0 0 9 4.64 1 1 2 77.285 77.285 2;3 2.001E-14 26924 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.87 99.736 40.638 27.052 9 59.644 101.98 57.323 38 28 9 56 102 56 2 2 1 2 3 2 24735 8277 1593 7979 19303;19304;19305;19306 22285;22286;22287;22288;22289 22285 5 GTFNIHVPK Unmodified 1011.5502 0.55016488 1432 P21995 Emb Embigin yes yes 0 0 0 0 9 0 1 52.84 52.84 3 0.02515 14410 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.261 21.142 88.74 63.176 0 90.719 0 0 83 65 0 83 0 0 1 1 0 1 0 0 8670.8 8278 1432 7980 19307 22290 22290 1 GTFTSGLK Unmodified 809.42832 0.42831841 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9.8 1.72 1 2 1 1 51.394 51.394 2;3 0.0089797 16808 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.43 52.084 655.62 624.53 1038.7 881.69 1318.6 1025 617 640 1034 886 1333 993 3 4 5 5 5 4 121710 8279 3397 7981 19308;19309;19310;19311;19312 22291;22292;22293;22294;22295 22295 5 GTGALSQSQAVFLSSFPAVYSELLK Unmodified 2599.3534 0.35336913 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 10 0 1 99.787 99.787 4 0.0031347 32602 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.418 23.58 0 0 0 12 0 0 0 0 0 12 0 0 0 0 0 1 0 0 1252.8 8280 343 7982 19313 22296 22296 1 GTGASGSFK Unmodified 810.38718 0.38718187 1546 P43274;P43277;I7HFT9;Q07133;P15864;P43276 Hist1h1e;Hist1h1d;Hist1h1t;Hist1h1c;Hist1h1b Histone H1.4;Histone H1.3;Histone H1t;Histone H1.2;Histone H1.5 yes no 0 0 0 0 7 0 1 38.919 38.919 2 0.010898 9371 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.267 26.351 0 0 87.836 44.214 44.078 58.438 0 0 83 46 46 56 0 0 1 1 1 1 3080.5 8281 1546 7983 19314 22297 22297 1 GTGFVASPLLK Unmodified 1088.623 0.62299547 197 A0A0R4J138;P50429 Arsb Arylsulfatase B yes no 0 0 0 0 9.5 0.5 1 1 67.512 67.512 2 0.0071629 21421 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.005 37.082 59.425 102.2 138.98 112.01 54.618 146.62 56 102 139 111 56 139 1 2 2 2 1 2 13284 8282 197 7984 19315;19316 22298;22299 22298 2 GTGGVDTAATGSVFDISNLDR Unmodified 2051.976 0.97597668 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 72.901 72.901 3 2.5422E-92 26687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 199.15 185.32 198.48 186.55 159.96 186.11 143.99 214.43 186 186 158 177 149 204 5 6 4 4 4 5 186920 8283 1490 7985 19317;19318;19319;19320 22300;22301;22302;22303;22304;22305;22306;22307 22300 8 GTGGVDTAAVGGVFDVSNADR Unmodified 1963.9235 0.92354718 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 6.29 3.01 1 1 1 2 1 1 66.037 66.037 2;3 5.0942E-62 23908 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 162.65 137.06 469.14 508.17 404.91 375.76 740.47 815.16 440 501 395 362 740 784 4 6 7 6 8 11 721840 8284 1883 7986 19321;19322;19323;19324;19325;19326;19327 22308;22309;22310;22311;22312;22313;22314;22315;22316;22317;22318;22319;22320 22319 13 GTGGVDTAAVGGVFDVSNADR Deamidation (N) 1964.9076 0.90756276 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 1 0 0 3.33 0.471 2 1 67.901 67.901 2;3 1.589E-13 24487 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.614 64.412 20.148 19.743 68.472 37.121 17.675 98.634 19 19 66 38 19 93 1 1 2 2 1 2 8243.9 8285 1883 7986 19328;19329;19330 22321;22322;22323 22323 774 3 GTGIVSAPVPK Unmodified 1024.5917 0.59169534 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 0 9.25 2.28 1 1 1 1 53.032 53.032 2 7.4226E-09 17523 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.143 58.421 79.765 82.891 66.167 25.139 0 99.138 75 84 65 23 0 93 1 2 1 1 0 2 11971 8286 1449 7987 19331;19332;19333;19334 22324;22325;22326;22327 22327 4 GTGLQPGEEELPDIAPPLVTPDEPK Unmodified 2598.3065 0.30647852 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 4 0.816 1 1 1 79.961 79.961 4 1.9461E-05 30296 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.498 36.188 49.171 57.332 0 155.89 79.916 106.45 46 57 0 144 83 102 1 2 0 4 2 4 18495 8287 1641 7988 19335;19336;19337 22328;22329;22330;22331 22329 4 GTGPEGR Unmodified 672.3191 0.31910231 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 6 4.97 1 1 1 18.604 18.604 2 0.012751 2674 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.18 47.943 456.26 625.5 360.42 439.31 605.12 462.94 430 622 388 432 613 448 2 2 3 3 3 2 105310 8288 2433 7989 19338;19339;19340 22332;22333;22334;22335 22333 4 GTGSTTGKPLHFK Unmodified 1329.7041 0.70409934 2952 Q9CR16;A0A0A6YW70 Ppid Peptidyl-prolyl cis-trans isomerase D;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1 10.5 0.5 1 1 42.802 42.802 4 0.00012672 8644 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.964 44.432 87.487 119.05 318.95 102.21 148.84 321.95 83 120 306 102 148 306 1 1 2 1 1 2 19259 8289 2952 7990 19341;19342 22336;22337 22337 2 GTGSVVGELMYK Unmodified 1239.6169 0.61692381 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 9.67 2.36 2 1 66.995 66.995 2;3 0.00012596 21985 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.916 49.687 108.22 62.936 152.88 90.266 62.65 136.79 102 65 149 92 65 130 2 1 2 2 1 2 11333 8290 2396 7991 19343;19344;19345 22338;22339;22340 22339 3 GTGVPVGQK Unmodified 841.46577 0.46576654 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 0 0 0 9.33 2.62 1 1 1 40.72 40.72 2;3 0.00040151 9544 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.62 63.411 148.06 0 296.31 302.5 236.96 309.84 139 0 287 297 250 297 2 0 3 3 3 3 41636 8291 765;987 7992 19346;19347;19348 22341;22342;22343 22342 3 GTHSLTK Unmodified 742.39735 0.39735263 1430 P21460 Cst3 Cystatin-C yes yes 0 0 0 0 7.5 0.5 1 1 29.646 29.646 3 0.0048231 4892 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.64 56.922 482.78 80.17 485.3 383.38 509.99 505.66 453 83 471 386 521 488 2 1 2 2 2 2 25886 8292 1430 7993 19349;19350 22344;22345 22345 2 GTIEILSDVQLIK Unmodified 1427.8235 0.82354577 1381 P14869;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 10 3 1 1 84.406 84.406 3 6.2576E-05 30753 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.018 62.072 30.044 50.008 0 29.921 75.04 28.811 28 47 0 28 74 28 1 1 0 1 2 1 8904.3 8293 1381 7994 19351;19352 22346;22347 22346 2 GTIEYTVESR Unmodified 1153.5615 0.56151742 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09;A0A2R8VKF8 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 46.274 46.274 2 5.1291E-09 14587 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 154.85 115.7 305.15 190.75 309.64 325.73 171.5 291.39 287 194 305 315 176 277 4 3 3 3 3 3 46732 8294 2028 7995 19353;19354;19355;19356;19357 22348;22349;22350;22351;22352 22349 5 GTIQVVTQGTSLK Unmodified 1330.7456 0.7456298 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 7.75 4.32 1 1 1 1 58.54 58.54 3 0.00010835 17179 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.451 54.006 0 467.36 350.61 373.21 24.862 523.76 0 444 352 361 28 492 0 3 3 4 1 4 60766 8295 2138 7996 19358;19359;19360;19361 22353;22354;22355;22356 22355 4 GTLDPVEK Unmodified 857.44945 0.44944778 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 7 3.16 1 1 1 1 1 49.356 49.356 2;3 2.9074E-06 15835 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 162.25 78.009 2520.3 2391.5 3219.3 2283.2 2915.6 3267.7 2373 2448 3208 2255 2972 3141 6 7 7 6 6 7 527950 8296 1762 7997 19362;19363;19364;19365;19366 22357;22358;22359;22360;22361;22362;22363;22364 22358 8 GTLEPVEK Unmodified 871.4651 0.46509784 1397;1407;1394 P17156;Q61696;P17879;P16627 Hspa2;Hspa1a;Hspa1b;Hspa1l Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 8 3.56 1 1 1 47.666 47.666 2 0.0075187 14793 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.71 24.503 185.91 158.08 359.3 128.66 98.65 135.76 176 166 347 139 102 130 2 2 2 2 1 1 28027 8297 1397;1407;1394 7998 19367;19368;19369 22365;22366;22367 22367 3 GTLGGLFSQILQGEDIVR Unmodified 1902.0211 0.021076378 1210 O35841 Api5 Apoptosis inhibitor 5 yes yes 0 0 0 0 9.5 0.5 1 1 95.979 95.979 3 0.00019365 31389 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.971 23.015 9.477 20.216 30.248 0 19.874 20.254 9 19 28 0 19 19 1 1 1 0 1 1 8251.8 8298 1210 7999 19370;19371 22368;22369 22369 2 GTLIALLMGVDSSETCR Unmodified 1821.8965 0.89646949 2552 Q8CI32 Bag5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 0 11.5 0.5 1 1 94.825 94.825 3 4.0984E-06 27179 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.433 60.993 14.965 9 39.368 13.268 14.035 0 14 9 37 14 14 0 1 1 2 1 1 0 3421.1 8299 2552 8000 19372;19373 22370;22371;22372 22372 3 GTLIEAFPVLGGK Unmodified 1300.7391 0.73908786 2178 Q64514;A0A087WRC0 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 82.727 82.727 3 7.6439E-05 26254 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.492 49.287 30.044 77.684 19.365 100.78 46.298 28.594 28 75 19 93 46 28 1 3 1 2 1 2 19053 8300 2178 8001 19374;19375;19376;19377 22373;22374;22375;22376;22377 22375 5 GTLPLNVIQMSQQKPLPR Unmodified 2019.1299 0.12991532 1976 Q3UH99;F6VQZ6 Shisa6 Protein shisa-6 homolog yes no 0 0 0 1 11.5 0.5 1 1 69.681 69.681 3 0.00033328 19908 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.322 40.708 59.856 0 38.91 18.448 0 39.442 56 0 37 19 0 37 1 0 1 1 0 1 15854 8301 1976 8002 19378;19379 22378;22379 22378 2 GTLQCEASAVPSAEFQWFK Unmodified 2155.0044 0.004440036 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 0 0 0 7.5 0.5 1 1 80.765 80.765 3;4 3.6558E-05 28360 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.017 39.711 78.737 131.9 66.744 101.65 0 69.29 74 130 65 93 0 65 1 2 1 1 0 1 12024 8302 765;987 8003 19380;19381 22380;22381 22381 2 GTLWEGGIR Unmodified 987.51378 0.51377937 197 A0A0R4J138;P50429 Arsb Arylsulfatase B yes no 0 0 0 0 11 0 1 70.035 70.035 2 0.039087 20110 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.167 15.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8303 197 8004 19382 22382 22382 1 GTNESLER Unmodified 904.42502 0.42502394 1304;1423 P03995;P20152;A0A0A6YWC8 Gfap;Vim Glial fibrillary acidic protein;Vimentin no no 0 0 0 0 4.17 4.06 1 2 1 1 1 28.64 28.64 2;3 0.0012864 6452 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 143.7 45.18 715.59 857.97 774.91 825.52 1081.8 1170.7 674 862 795 807 1105 1126 4 7 5 4 7 7 431260 8304 1304;1423 8005 19383;19384;19385;19386;19387;19388 22383;22384;22385;22386;22387;22388;22389;22390 22384 8 GTNSAGVPR Unmodified 857.43553 0.43552905 2362 Q8BFT9 Svop Synaptic vesicle 2-related protein yes yes 0 0 0 0 5 0 1 27.503 27.503 2 0.010898 5254 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.267 23.369 14.979 23.462 0 20.515 13.385 9.212 14 23 0 19 14 9 1 2 0 1 1 1 1216.8 8305 2362 8006 19389 22391;22392 22391 2 GTPEPGPLGATDER Unmodified 1395.663 0.66302238 1937 Q3TVK3;Q9Z2W0;Q8BPW9;A0A087WS31;A0A087WSE6 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 2.75 0.829 2 1 1 45.193 45.193 2;3 6.4595E-11 14363 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 122.51 84.96 20.387 49.368 38.285 51.371 46.477 47.71 19 47 37 47 46 46 1 2 1 2 1 1 12658 8306 1937 8007 19390;19391;19392;19393 22393;22394;22395;22396 22395 4 GTPGPTVR Unmodified 783.4239 0.42390173 1163 O08688 Capn5 Calpain-5 yes yes 0 0 0 0 5 0 1 30.305 30.305 2 0.046031 6580 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.252 27.694 0 20.216 0 14.881 22.371 29.21 0 19 0 14 23 28 0 1 0 1 1 1 2295.6 8307 1163 8008 19394 22397 22397 1 GTPIPDSSSTLASGEFTGVK Unmodified 1949.9582 0.95820135 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 6 0 1 67.141 67.141 3 7.4785E-06 23424 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.564 41.879 0 0 58.947 36.928 0 0 0 0 56 37 0 0 0 0 1 1 0 0 3985.3 8308 2095 8009 19395 22398 22398 1 GTPLDTEVPLER Unmodified 1325.6827 0.68269519 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 3.5 0.5 1 1 58.528 58.528 2 7.5258E-21 20577 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 160.18 99.785 135.77 80.996 102.91 47.003 0 29.848 130 84 102 46 0 28 3 2 2 1 0 1 17968 8309 974 8010 19396;19397 22399;22400;22401 22400 3 GTPLISPHIK Unmodified 1061.6233 0.62332982 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 8 0 1 50.968 50.968 3 0.0021206 14370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.347 20.21 107.97 117.92 148.08 99.638 160.69 0 102 120 148 102 158 0 1 1 1 1 1 0 5540.4 8310 1412 8011 19398 22402 22402 1 GTPPPSDQEK Unmodified 1054.4931 0.49310351 3161 Q9EP89;A0A1L1SVF9 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial yes no 0 0 0 0 4 0 1 33.806 33.806 3 0.00043367 8426 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.898 55.824 0 0 9.738 0 0 39.442 0 0 9 0 0 37 0 0 1 0 0 1 2452.8 8311 3161 8012 19399 22403 22403 1 GTPQQIDYAR Unmodified 1147.5622 0.56218613 99 A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8;A0A0G2JG96 Fubp1 Far upstream element-binding protein 1 yes no 0 0 0 0 4.5 0.5 1 1 40.455 40.455 2 0.00019397 11327 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.958 37.675 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 3942.9 8312 99 8013 19400;19401 22404;22405 22405 2 GTPSQSPVVGR Unmodified 1083.5673 0.5672715 9 A0A087WNV1;A0A087WSR7;A0A087WR52;Q8K2K6;A0A087WRL1 Agfg1 Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 0 9.5 3.5 1 1 34.489 34.489 2 1.7065E-05 8156 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.43 69.626 103.57 33.57 56.792 28.37 27.169 23.743 97 37 56 28 28 23 2 1 2 1 1 1 5868.1 8313 9 8014 19402;19403 22406;22407 22406 2 GTPTEEQVR Unmodified 1015.4934 0.49343786 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 30.266 30.266 2 0.0016431 7526 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.688 56.818 39.097 65.758 131.85 93.493 105 0 37 65 130 92 102 0 2 2 3 2 2 0 42899 8314 3391 8015 19404;19405;19406;19407 22408;22409;22410;22411 22410 4 GTPWEGGLFK Unmodified 1090.5447 0.54474515 1070 Q8CFZ0;G3UYP0;P63280 Ube2i SUMO-conjugating enzyme UBC9 yes no 0 0 0 0 8 0 1 70.375 70.375 2 0.00014548 23473 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.11 55.793 0 38.738 37.71 0 0 39.442 0 37 37 0 0 37 0 1 1 0 0 1 8288.3 8315 1070 8016 19408 22412 22412 1 GTQGVVTNFEIFR Unmodified 1466.7518 0.75177781 2569 Q8JZQ9 Eif3b Eukaryotic translation initiation factor 3 subunit B yes yes 0 0 0 0 8 0 1 71.039 71.039 3 0.016812 23822 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.436 26.602 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8316 2569 8017 19409 22413 22413 1 GTQKPYALK Unmodified 1004.5655 0.56548059 1328 Q8BGR3;P08414 Camk4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 1 9 0 1 44.329 44.329 3 0.035029 10535 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.539 23.118 99.279 0 85.686 81.24 0 103.4 93 0 83 79 0 97 1 0 1 1 0 1 7904 8317 1328 8018 19410 22414 22414 1 GTRDDEYDYLFK Acetyl (Protein N-term) 1562.6889 0.68890278 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492;E9Q6B3 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 1 0 0 1 3 0 1 69.35 69.35 2 0.00040555 25592 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.223 42.332 48.91 35.312 45.335 46.515 56.439 0 46 37 46 46 56 0 1 1 1 1 1 0 6412.9 8318 1556 8019 19411 22415 22415 1 GTSFEAAATSGGSASSEK Unmodified 1643.7275 0.72747313 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 3 2 1 1 46.951 46.951 3 8.0444E-08 13959 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.638 60.8 59.736 9.576 59.084 47.493 18.936 39.442 56 9 56 47 19 37 1 1 1 2 1 1 6224.8 8319 2860 8020 19412;19413 22416;22417 22416 2 GTTASQMAQALALDK Unmodified 1504.7555 0.75554256 2090 Q60854;K7E6F1;F8WIV2;E9Q3Y1;E9Q6X2;E9Q108;E9Q0P9;E9PZQ9;E9Q4R2;E9PYY0 Serpinb6;Serpinb6a Serpin B6 yes no 0 0 0 0 7 0 1 68.556 68.556 3 0.00016406 23241 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.481 45.602 78.462 102.04 71.578 44.264 92.956 66.637 74 102 74 46 93 65 1 1 1 1 1 1 5586.3 8320 2090 8021 19414 22418 22418 1 GTTAVLTEK Unmodified 918.50221 0.50221163 1800 P70195 Psmb7 Proteasome subunit beta type-7 yes yes 0 0 0 0 8 2.92 2 1 1 47.737 47.737 2;3 0.00027004 13521 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.38 58.159 291.65 223.81 261.26 327 91.653 140.23 273 226 264 315 93 134 3 3 3 4 1 2 32482 8321 1800 8022 19415;19416;19417;19418 22419;22420;22421;22422 22421 4 GTTELEEEFER Unmodified 1338.5939 0.59393976 608 B1AZF9;B1AZF3;Q80YE4 Aatk Serine/threonine-protein kinase LMTK1 yes no 0 0 0 0 1 0 1 57.421 57.421 2 0.0027925 18353 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.927 49.156 40.638 27.052 0 0 0 0 38 28 0 0 0 0 1 1 0 0 0 0 3287.4 8322 608 8023 19419 22423 22423 1 GTTGFEAHIDK Unmodified 1174.5619 0.56185177 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 13 0 1 45.629 45.629 3 0.0083721 14257 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.013 26.221 68.903 93.262 62.458 43.307 172.69 0 65 93 65 46 167 0 1 1 1 1 1 0 9607.8 8323 1579 8024 19420 22424 22424 1 GTTILAK Unmodified 702.42759 0.42759012 1805 P70280 Vamp7 Vesicle-associated membrane protein 7 yes yes 0 0 0 0 9 0 1 49.197 49.197 2 0.055109 12597 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.189 16.585 128.76 0 0 108.54 156.37 113.86 120 0 0 102 158 111 1 0 0 1 1 1 47194 8324 1805 8025 19421 22425 22425 1 GTTPLAPPPKPVR Unmodified 1329.7769 0.77687035 755 D3Z2E3;F6R6F1;E9Q632;O54916 Reps1 RalBP1-associated Eps domain-containing protein 1 yes no 0 0 0 1 9 0 1 45.894 45.894 3 0.036396 11298 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.991 18.774 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 4841.9 8325 755 8026 19422 22426 22426 1 GTTPLHVAAK Unmodified 993.56073 0.56072956 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 8 0 1 40.169 40.169 3 0.0013651 9294 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.349 42.95 157.96 167.04 0 169.13 189.31 292.01 148 167 0 158 198 279 1 1 0 1 1 1 10126 8326 2046 8027 19423 22427 22427 1 GTTVQLECR Unmodified 1062.5128 0.51279309 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 1 39.708 39.708 2 0.023755 10992 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.691 41.409 69.288 0 76.802 65.466 53.241 67.771 65 0 74 65 56 65 1 0 1 1 1 1 5798.9 8327 20;2354 8028 19424 22428 22428 1 GTTVTPDKR Unmodified 973.51926 0.51925868 53 Q9JKV1;A0A0A6YVU8;D3YUD8 Adrm1;Gm9774 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 1 6.5 0.5 1 1 31.434 31.434 3 0.0029081 6658 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.645 41.921 99.389 0 67.19 116.32 52.885 77.375 93 0 65 111 56 74 2 0 1 2 1 1 5509.2 8328 53 8029 19425;19426 22429;22430 22429 2 GTVACGQPPVVENAK Unmodified 1525.7559 0.75587691 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;F7B603 Vcan Versican core protein yes no 0 0 0 0 6 0 1 48.191 48.191 3 0.0090897 14475 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.647 20.326 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8329 851 8030 19427 22431 22431 1 GTVAPPVR Unmodified 795.46029 0.46028724 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 6 0.816 1 1 1 36.634 36.634 2 0.0079157 9036 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.21 28.174 177.62 196.89 171.68 95.464 282.36 148.14 167 199 167 93 279 144 2 3 2 2 3 2 35012 8330 2487 8031 19428;19429;19430 22432;22433;22434 22433 3 GTVAYVGATLFATGK Unmodified 1454.7769 0.77692993 895 E9Q3M3;O08788;E9Q586;D3Z2M9;D3YYG9 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 8.33 5.19 1 2 76.294 76.294 2;3 3.5295E-05 20311 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.17 86.425 78.936 0 78.383 28.887 85.278 37.808 74 0 74 28 84 37 2 0 2 1 2 1 14188 8331 895 8032 19431;19432;19433 22435;22436;22437 22437 3 GTVGQKPTCGR Unmodified 1159.5768 0.57679033 2088 Q60829 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B yes yes 0 0 0 1 8.5 0.5 1 1 30.727 30.727 3 0.0045391 5198 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.577 45.004 44.326 103.12 144.62 83.047 240.2 82.69 42 102 143 88 236 84 1 2 2 2 2 2 10112 8332 2088 8033 19434;19435 22438;22439 22439 2 GTVIIIANHGDR Unmodified 1264.6888 0.68878362 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 7 0.816 1 1 1 44.295 44.295 3 0.00020792 11831 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.927 49.152 49.076 0 47.458 46.388 158.45 0 46 0 46 46 158 0 1 0 1 1 2 0 11713 8333 2783 8034 19436;19437;19438 22440;22441;22442 22441 3 GTVLDQVPVNPSLYLIK Unmodified 1855.0455 0.045500215 2112 Q61142 Spin1 Spindlin-1 yes yes 0 0 0 0 9 0 1 86.818 86.818 3 0.00084533 30428 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.787 23.758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8334 2112 8035 19439 22443 22443 1 GTVLLSGPR Unmodified 898.52362 0.52361577 245 A0A1B0GSF7;A0A1B0GSS8;A0A1B0GQU8;P35980 Rpl18 60S ribosomal protein L18 yes no 0 0 0 0 8.5 0.5 1 1 48.727 48.727 2 0.0077811 12449 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.192 42.312 69.084 91.018 132.32 56.761 0 59.696 65 92 130 56 0 56 1 2 2 1 0 1 9969.1 8335 245 8036 19440;19441 22444;22445 22445 2 GTVLYLQK Unmodified 920.53312 0.53311783 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 10.7 1.7 1 1 1 58.918 58.918 2 0.0011922 15569 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.16 41.268 551.67 414.74 524.99 574.06 706.42 744.16 519 433 521 566 725 717 3 3 2 3 3 3 64095 8336 814 8037 19442;19443;19444 22446;22447;22448 22447 3 GTVMTFL Unmodified 767.38876 0.38876178 1182 O35215;G3UZN1 Ddt D-dopachrome decarboxylase yes no 0 0 0 0 11 2 1 1 82.769 82.769 2 0.027604 32130 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.03 83.617 20.387 20.216 0 20.767 0 50.102 19 19 0 19 0 47 1 1 0 1 0 2 3810.1 8337 1182 8038 19445;19446 22449;22450 22450 2 GTVQGQLQGPVSK Unmodified 1297.699 0.69901396 1635 P56376;E9QJT5 Acyp1 Acylphosphatase-1;Acylphosphatase yes no 0 0 0 0 6.5 0.5 1 1 48.662 48.662 3 0.0024427 13847 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.823 29.218 127.03 166.62 149.5 0 138.98 186.85 120 167 148 0 139 179 1 1 1 0 1 1 11014 8338 1635 8039 19447;19448 22451;22452 22452 2 GTVTDFPGFDGR Unmodified 1267.5833 0.5833155 1577 P48036;A0A0G2JGQ0 Anxa5 Annexin A5 yes no 0 0 0 0 10.3 3.77 1 2 62.317 62.317 2;3 0.00016056 22020 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.306 61.579 758.24 422.48 484.41 662.69 539.22 491.71 711 448 500 642 553 472 4 3 4 5 3 4 42689 8339 1577 8040 19449;19450;19451 22453;22454;22455;22456;22457 22454 5 GTVTGQVQGPEEK Unmodified 1328.6572 0.65720872 1634 P56375 Acyp2 Acylphosphatase-2 yes yes 0 0 0 0 5 0 1 43.135 43.135 3 9.2416E-05 12609 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.729 54.923 59.804 0 47.796 37.592 0 0 56 0 46 37 0 0 1 0 1 1 0 0 6244.3 8340 1634 8041 19452 22458 22458 1 GTVVTGTLER Unmodified 1031.5611 0.56112349 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 44.342 44.342 2 7.8481E-09 13301 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.06 99.124 364.91 385.5 290.33 282.06 474.06 531.44 343 390 297 278 473 510 3 4 3 3 3 3 68088 8341 2361 8042 19453;19454;19455;19456 22459;22460;22461;22462 22459 4 GTVVYGEPITASLGTDGSHYWSK Unmodified 2424.1598 0.1597547 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7.17 1.07 2 2 1 1 70.188 70.188 3;4;5 1.3288E-16 24849 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.15 88.959 196.79 334.26 188.7 355.12 381.06 367.38 185 325 185 333 390 352 4 5 3 4 6 5 108160 8342 1158 8043 19457;19458;19459;19460;19461;19462 22463;22464;22465;22466;22467;22468;22469 22464 7 GTWVQLK Unmodified 830.46504 0.46503826 2935 Q9CQM8;O09167 Rpl21 60S ribosomal protein L21 yes no 0 0 0 0 9.5 0.5 1 1 59.963 59.963 2 0.0072946 17855 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 129.4 62.715 300.8 231.37 285.15 127.07 346.04 261.96 283 241 283 130 345 255 2 2 2 1 2 2 25014 8343 2935 8044 19463;19464 22470;22471 22470 2 GTYDILVTK Unmodified 1008.5492 0.54916182 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 8.67 3.09 1 1 1 63.057 63.057 2 0.00082293 22511 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.84 46.106 68.656 171.02 121.98 158.01 336.05 206.81 65 167 120 157 335 203 1 2 1 2 2 2 19288 8344 68 8045 19465;19466;19467 22472;22473;22474 22474 3 GTYLTNEAK Unmodified 995.49238 0.49237523 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 8.67 3.09 1 1 1 45.8 45.8 2 0.0012856 13533 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.88 68.583 157.31 116.25 152.04 128.74 170.07 114.38 148 116 153 129 172 111 3 2 3 3 3 2 14999 8345 1072 8046 19468;19469;19470 22475;22476;22477 22475 3 GTYTVSR Unmodified 782.39227 0.39226725 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 6 0 1 31.628 31.628 2 0.027671 6783 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.093 46.127 39.414 56.926 0 60.025 62.915 67.495 37 56 0 56 65 65 1 1 0 1 1 1 5610.2 8346 2790 8047 19471 22478 22478 1 GVAALQNNFFITNLMDVLQR Unmodified 2263.1783 0.17832208 3195 Q9ESN6;Q3UHH4;E9QKC6;D3YY69;D3YZJ0;D3YTN5 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 12 0 1 105.09 105.09 3 2.2673E-30 29220 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.54 97.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8347 3195 8048 19472 22479 22479 1 GVAALTSDPAVQAIVLDTASDVLDK Unmodified 2468.301 0.30099921 1450 P26039 Tln1 Talin-1 yes yes 0 0 0 0 7 0 1 102.34 102.34 4 3.2483E-05 36936 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.25 32.534 6.3827 0 9.2923 9.2832 0 9.594 6 0 9 9 0 9 1 0 1 1 0 1 767.27 8348 1450 8049 19473 22480 22480 1 GVAASTNDPEAAHAMLDSAR Unmodified 1982.9116 0.91160228 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1 Tln2 Talin-2 yes no 0 0 0 0 4 0 1 48.412 48.412 3 9.0969E-07 15521 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.963 38.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2044.9 8349 287 8050 19474 22481 22481 1 GVAGALRPLLQGAVPAASEPPVLDVK Unmodified 2524.4377 0.43770789 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 1 9.8 1.17 1 1 1 2 81.351 81.351 3;4 1.1601E-23 25659 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.92 85.848 133.59 69.28 291.18 428.18 374.39 106.98 125 70 282 412 376 102 3 2 4 6 6 3 110960 8350 2958 8051 19475;19476;19477;19478;19479 22482;22483;22484;22485;22486;22487;22488;22489;22490 22486 9 GVAINFVTEEDKR Unmodified 1476.7573 0.75725712 1345 P10630;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 1 7 0 1 58.019 58.019 3 0.015904 18318 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.487 10.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8351 1345 8052 19480 22491 22491 1 GVAPLWMR Unmodified 928.49529 0.49529253 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 63.031 63.031 2 0.0036374 17445 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.17 48.528 739.59 70.221 71.05 776.87 834.09 105.92 690 74 74 729 835 102 2 1 1 3 3 1 101700 8352 2715 8053 19481;19482;19483 22492;22493;22494 22493 3 GVATSWLR Unmodified 888.48175 0.48175096 1530 Q05DV1;P37040 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 10 0 1 56.915 56.915 2 0.013407 14502 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.284 39.368 69.054 0 116.08 82.472 70.646 86.462 65 0 111 83 74 83 1 0 1 1 1 1 10967 8353 1530 8054 19484 22495 22495 1 GVAYTLLTPK Unmodified 1061.6121 0.61209643 2351 Q810A7 Ddx42 ATP-dependent RNA helicase DDX42 yes yes 0 0 0 0 10 0 1 66.704 66.704 2 0.0028902 18930 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.948 53.763 0 38.928 26.291 37.481 74.071 46.922 0 37 28 37 74 46 0 1 1 1 1 1 2997.7 8354 2351 8055 19485 22496 22496 1 GVCVDGQCICDSEYSGDDCSELR Unmodified 2680.0146 0.014565084 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 2.5 0.5 1 1 59.491 59.491 3 4.2456E-16 20531 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.128 87.022 0 0 19.476 0 18.507 9.3345 0 0 18 0 18 9 0 0 2 0 2 1 8628.1 8355 2479 8056 19486;19487 22497;22498 22497 2 GVDCDIDVPK Unmodified 1116.5121 0.51212439 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 4 0 1 54.825 54.825 3 0.0094852 18547 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.278 34.118 39.116 25.879 76.312 45.041 36.633 0 37 28 74 46 37 0 1 1 1 1 1 0 2682.8 8356 1512 8057 19488 22499 22499 1 GVDDALLSLK Unmodified 1029.5706 0.57062555 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 13 0 1 71.756 71.756 2 0.0091996 26848 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.704 32.266 39.189 35.795 55.668 57.89 0 59.696 37 37 56 56 0 56 1 1 1 1 0 1 4152.6 8357 1089 8058 19489 22500 22500 1 GVDDGADIPR Unmodified 1013.4778 0.47778779 1918 Q3TES0 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes yes 0 0 0 0 2 0 1 42.831 42.831 2 5.2966E-05 13087 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 106.2 45.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8358 1918 8059 19490 22501 22501 1 GVDDLDFFIGDEAIDKPTYATK Unmodified 2429.1638 0.16383703 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 1 8 3.56 1 1 1 82.56 82.56 3;4 1.1566E-16 30740 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.32 83.954 0 56.809 160.88 149.63 135.53 86.963 0 55 158 148 139 84 0 2 3 3 3 2 20423 8359 2170 8060 19491;19492;19493 22502;22503;22504 22503 3 GVDDLDFFIGDEAIEKPTYATK Unmodified 2443.1795 0.17948709 2836 Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WP86;A0A087WS98 Actr3 Actin-related protein 3 yes no 0 0 0 1 8.5 3.25 1 1 2 2 82.785 82.785 3;4 1.114E-15 30784 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.816 79.094 288.2 160.11 194.16 143.91 195.23 213.79 270 158 186 139 195 205 6 4 4 4 4 4 72276 8360 2836 8061 19494;19495;19496;19497;19498;19499 22505;22506;22507;22508;22509;22510;22511 22507 7 GVDEGPNGLK Deamidation (N) 985.47164 0.47163978 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 1 0 0 6.67 4.5 1 1 1 47.291 47.291 3 0.0051945 15484 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.283 43.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8361 1368 8062 19500;19501;19502 22512;22513;22514 22512 438 3 GVDEGPNGLK Unmodified 984.48762 0.4876242 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 4.5 0.5 1 1 46.096 46.096 2 0.0055344 14101 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.375 30.353 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8362 1368 8062 19503;19504 22515;22516 22516 2 GVDEVTIVNILTNR Unmodified 1541.8413 0.8413211 569 B0V2N8;B0V2N7;P07356 Anxa2 Annexin;Annexin A2 yes no 0 0 0 0 7 0 1 83.607 83.607 3 0.0060293 30409 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.964 22.978 9.657 0 0 20.411 18.936 0 9 0 0 19 19 0 1 0 0 1 1 0 1332.7 8363 569 8063 19505 22517 22517 1 GVDIYTGLLSALASVPTLPSES Unmodified 2189.1467 0.1467304 157 A0A1L1SRW7;A0A1L1SS90;A0A0R4J050;A0A1L1SRC1 yes no 0 0 0 0 11.3 1.25 1 1 1 117.86 117.86 3 5.0462E-16 35227 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.205 81.164 3.2094 1.9116 0 0 5 0 3 2 0 0 5 0 1 1 0 0 1 0 6734.7 8364 157 8064 19506;19507;19508 22518;22519;22520 22518 3 GVDLQESNPASR Unmodified 1271.6106 0.61059288 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 0 0 0 4 0 1 43.094 43.094 2 2.4703E-14 12943 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 134.38 100.66 0 0 0 39.57 46.298 0 0 0 0 37 46 0 0 0 0 1 1 0 5927.6 8365 1514 8065 19509 22521 22521 1 GVDLTEPAQPAR Unmodified 1252.6412 0.64116473 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 0 0 0 4.67 0.471 1 2 47.436 47.436 2;3 1.615E-11 15026 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.53 94.312 59.562 29.315 117.02 47.245 34.515 118.41 56 28 112 47 37 112 2 1 3 1 1 3 7963.1 8366 2921 8066 19510;19511;19512 22522;22523;22524 22522 3 GVDLVLNSLAEEK Unmodified 1385.7402 0.74021007 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6.5 0.5 1 1 79.661 79.661 2;3 0.00046675 28481 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.912 46.838 0 20.216 37.917 77.454 62.113 67.518 0 19 37 74 65 65 0 1 1 2 2 2 6746.1 8367 1412 8067 19513;19514 22525;22526 22526 2 GVDNGEDIPR Unmodified 1070.4993 0.49925152 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 1 0 1 39.683 39.683 2 6.749E-10 11086 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 131.82 80.483 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8368 553 8068 19515 22527 22527 1 GVDQDPK Unmodified 757.36063 0.36063277 3323 Q9WTR5 Cdh13 Cadherin-13 yes yes 0 0 0 0 4 0 1 35.037 35.037 2 0.052604 9196 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.854 41.776 29.856 37.355 0 80.882 0 69.29 28 37 0 74 0 65 1 1 0 1 0 1 4870.7 8369 3323 8069 19516 22528 22528 1 GVDSIPGFEFDR Unmodified 1337.6252 0.62518031 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 6 0 1 71.216 71.216 2 0.0010902 25369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.848 46.805 58.836 35.401 0 60.018 63.245 57.891 55 37 0 56 65 56 1 1 0 1 1 1 4497.4 8370 2686 8070 19517 22529 22529 1 GVEAEEWGK Unmodified 1003.4611 0.4610751 815 E9PUD2 Dnm1l yes yes 0 0 0 0 4.5 0.5 1 1 52.945 52.945 2 0.00020504 17690 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.75 81.033 217.54 160.43 91.105 94.185 108.15 105.65 204 166 93 93 111 102 2 2 1 1 1 1 13974 8371 815 8071 19518;19519 22530;22531 22530 2 GVEDSSK Unmodified 720.329 0.32899829 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 4.5 0.5 1 1 32.177 32.177 2 0.027379 7820 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.299 48.941 34.336 73.416 0 160.48 68.202 106.79 32 69 0 148 69 102 1 1 0 2 1 2 15338 8372 817 8072 19520;19521 22532;22533 22532 2 GVEGCTK Unmodified 749.33779 0.33778884 1525 P35762 Cd81 CD81 antigen yes yes 0 0 0 0 5.5 0.5 1 1 33.463 33.463 2 0.027379 7984 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.299 63.199 39.257 45.696 75.964 26.148 123.08 65.778 37 46 74 28 120 65 1 1 2 1 1 2 5106.7 8373 1525 8073 19522;19523 22534;22535 22534 2 GVEGLIDIENPNR Unmodified 1424.726 0.72595699 1987 Q3UHX2 Pdap1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 0 7.33 4.03 1 1 1 67.135 67.135 2;3 3.3283E-06 23983 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.26 73.066 14.822 0 33.541 22.624 27.434 23.735 14 0 32 23 28 23 1 0 1 1 1 1 5636.6 8374 1987 8074 19524;19525;19526 22536;22537;22538 22537 3 GVEGSDYINASFLDGYR Unmodified 1861.8483 0.84825697 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;A2A8L5;F6Y3V0;F6S1X8 Ptprd;Ptprf Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase F yes no 0 0 0 0 5 0 1 74.499 74.499 3 0.00031005 27452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.172 0 0 20.216 0 0 39.091 19.139 0 19 0 0 38 19 0 1 0 0 1 1 2235.6 8375 642 8075 19527 22539 22539 1 GVEICIATPGR Unmodified 1171.6019 0.60194245 2135;1963 Q8BTS0;Q61656;S4R1I6;Q501J6;Q3U741;Q3TU25 Ddx5;Ddx17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 6 0 1 57.874 57.874 2 0.02546 19064 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.471 29.085 0 0 58.947 36.928 0 49.036 0 0 56 37 0 46 0 0 1 1 0 1 3656.9 8376 2135;1963 8076 19528 22540 22540 1 GVEIEGPLSAQTNWDIAHMISGFE Unmodified 2600.2217 0.22170303 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 5 0 1 98.996 98.996 3 0.011078 35864 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.052 18.438 2.146 0 0 0 0 2.132 2 0 0 0 0 2 1 0 0 0 0 1 718.13 8377 1864 8077 19529 22541 22541 1 GVEIETISPGDGR Acetyl (Protein N-term) 1370.6678 0.66777341 2340 Q80YE1;Q9Z2I2 Fkbp1b Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1B yes no 1 0 0 0 2 0 1 40.015 40.015 2 0.00070378 11866 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 26.359 40.679 18.848 0 59.823 73.657 29.08 38 19 0 56 74 28 2 1 0 2 2 1 10519 8378 2340 8078 19530 22542;22543 22543 2 GVEIETISPGDGR Unmodified 1328.6572 0.65720872 2340 Q80YE1;Q9Z2I2 Fkbp1b Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1B yes no 0 0 0 0 8.5 4.5 1 1 54.265 54.265 2;3 4.4956E-15 18444 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.89 97.978 88.644 131.28 0 147.38 241.77 103.14 83 129 0 139 241 102 1 2 0 2 2 1 9218.2 8379 2340 8078 19531;19532 22544;22545 22544 2 GVEITGFPEAQALGLQVFHAGTALK Unmodified 2553.3591 0.35912321 2183 Q64737 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 0 9 0 1 87.978 87.978 4 0.051975 30981 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 24.351 15.304 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 2890.6 8380 2183 8079 19533 22546 22546 1 GVEPEEFDR Unmodified 1076.4775 0.47745344 2303 Q80TL4 Kiaa1045 Protein KIAA1045 yes yes 0 0 0 0 2 0.816 1 1 1 46.944 46.944 2 5.4246E-08 15163 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 161.79 122.77 227.45 207.05 228.88 311.26 180.51 225.07 213 204 222 296 185 213 3 3 3 4 3 3 126280 8381 2303 8080 19534;19535;19536 22547;22548;22549;22550;22551 22551 5 GVEQQDGAVPEK Unmodified 1255.6044 0.60444487 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.6 4.45 1 1 1 2 42.797 42.797 2;3 1.8356E-14 13415 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.7 74.436 98.688 204.65 290.76 268.75 408.83 279.01 93 194 280 260 408 268 1 4 2 3 4 3 47902 8382 510 8081 19537;19538;19539;19540;19541 22552;22553;22554;22555;22556 22552 5 GVEVTVGHEQEEGGK Unmodified 1553.7322 0.73216458 3037 Q9D172;A0A1W2P7B6;A0A1W2P870 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 4 0 1 41.996 41.996 4 2.8003E-05 12447 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.592 81.225 0 39.368 0 0 46.807 38.106 0 37 0 0 46 37 0 1 0 0 1 1 2918.5 8383 3037 8082 19542 22557 22557 1 GVEVTVGHEQEEGGKWPYAGTAEAIK Unmodified 2741.3297 0.32967358 3037 Q9D172;A0A1W2P7B6;A0A1W2P870 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 1 5 0 1 62.358 62.358 4 0.0032132 21777 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.21 21.322 20.149 0 79.352 38.092 46.477 77.558 19 0 75 37 46 74 1 0 2 1 1 2 4424.5 8384 3037 8083 19543 22558;22559 22558 2 GVFDVDKK Unmodified 906.48108 0.48108226 3028 Q9D0K2 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 1 8 0 1 52.284 52.284 3 0.03789 14982 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.426 24.348 614.96 363.94 571.27 412.29 502.17 481.36 578 390 568 417 514 465 1 1 1 1 1 1 39668 8385 3028 8084 19544 22560 22560 1 GVFIVAAK Unmodified 803.49052 0.49052473 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 62.857 62.857 2;3 0.0012226 17305 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.99 47.902 197.24 132.36 166.98 76.894 77.404 118.33 185 130 158 74 74 111 2 1 2 1 1 1 24413 8386 2472 8085 19545;19546 22561;22562;22563 22561 3 GVFLANQK Unmodified 875.4865 0.48650199 3167 Q9EPR5 Sorcs2 VPS10 domain-containing receptor SorCS2 yes yes 0 0 0 0 10 0 1 53.501 53.501 2 0.0060451 13132 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.61 64.894 34.149 37.065 0 0 42.619 38.226 32 37 0 0 42 37 1 1 0 0 1 1 3488.9 8387 3167 8086 19547 22564 22564 1 GVFLENLGNTDFIK Unmodified 1565.809 0.80895834 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 11 2 1 1 82.462 82.462 3 0.0068798 28471 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.863 23.665 69.329 0 117.64 47.438 0 69.29 65 0 111 46 0 65 1 0 2 1 0 1 8052.1 8388 970 8087 19548;19549 22565;22566 22565 2 GVFPENFTER Unmodified 1194.5669 0.56693715 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 8.67 3.09 1 1 1 59.97 59.97 2 7.1701E-05 20900 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.35 67.205 196.3 374.46 421.83 351.13 508.33 292.45 185 371 426 353 511 285 2 3 3 3 3 2 61033 8389 1157;2210 8088 19550;19551;19552 22567;22568;22569 22569 3 GVGDDQLGEESEERDDHLLPM Oxidation (M) 2356.0125 0.012498119 1448 P24668 M6pr Cation-dependent mannose-6-phosphate receptor yes yes 0 0 1 1 1 0 1 56.927 56.927 3 9.1534E-08 18106 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.39 63.518 0 0 29.962 7.5069 28.943 0 0 0 28 9 28 0 0 0 1 1 1 0 2734.9 8390 1448 8089 19553 22570 22570 99 1 GVGDDQLGEESEERDDHLLPM Unmodified 2340.0176 0.017583497 1448 P24668 M6pr Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 1 1.5 0.5 1 1 64.127 64.127 3 3.6551E-08 21453 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.21 63.82 20.387 0 20.558 40.441 0 29.848 19 0 19 37 0 28 1 0 1 1 0 1 9447.7 8391 1448 8089 19554;19555 22571;22572 22571 2 GVGDGTVSWGLEDDEDMTLTR Unmodified 2251.9903 0.99030611 3014;3050 Q9CZY3;B7ZBY7;E9PY39;B7ZBY6;Q9D2M8 Ube2v1;Gm20431;Ube2v2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 0 3.5 0.5 1 1 75.6 75.6 3 4.7537E-11 28403 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.855 75.862 9.5372 0 29.133 36.467 9.025 0 9 0 28 37 9 0 1 0 2 3 1 0 7577.9 8392 3014;3050 8090 19556;19557 22573;22574;22575;22576;22577 22573 5 GVGGACVLVA Unmodified 901.46914 0.46913736 1371 P14115 Rpl27a 60S ribosomal protein L27a yes yes 0 0 0 0 6 0 1 63.86 63.86 2 0.038628 21812 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.765 42.212 50.176 16.347 29.062 0 9.414 0 47 19 28 0 9 0 1 1 1 0 1 0 3325.8 8393 1371 8091 19558 22578 22578 1 GVGGVSVTSFPAR Unmodified 1232.6513 0.65133548 740 D3Z0G0;Q9EQ80 Nif3l1 NIF3-like protein 1 yes no 0 0 0 0 8 0 1 56.073 56.073 2 1.1514E-08 16753 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.561 53.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8394 740 8092 19559 22579 22579 1 GVGIISEGNETVEDIAAR Unmodified 1828.9167 0.91667089 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 4.55 2.93 2 3 2 2 1 1 67.802 67.802 2;3;4 1.743E-265 24304 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 296.17 258.23 1467.1 1090.4 1277.2 1101.2 1622.9 1550.8 1378 1125 1268 1072 1640 1493 13 13 14 16 14 18 1283900 8395 106;2253;2699 8093 19560;19561;19562;19563;19564;19565;19566;19567;19568;19569;19570 22580;22581;22582;22583;22584;22585;22586;22587;22588;22589;22590;22591;22592;22593;22594;22595;22596;22597;22598;22599;22600;22601 22593 22 GVGIISEGNETVEDIAAR Deamidation (N) 1829.9007 0.90068647 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 0 3 0.707 1 2 1 70.693 70.693 2;3 4.0351E-43 26169 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.54 102.83 20.292 58.998 37.388 29.601 9.414 9.594 19 57 38 28 9 9 1 2 2 1 1 1 24093 8396 106;2253;2699 8093 19571;19572;19573;19574 22602;22603;22604;22605 22604 38 4 GVIAISK Unmodified 686.43268 0.4326755 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 9 0 1 53.562 53.562 2 0.027111 14833 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.041 35.03 147.43 125.33 182.17 0 0 0 139 130 176 0 0 0 1 1 1 0 0 0 7581.8 8397 82 8094 19575 22606 22606 1 GVIALCIEDGSIHR Unmodified 1538.7875 0.78751139 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 6 0 1 60.585 60.585 3 0.00012441 20350 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.552 74.743 0 0 49.772 0 18.867 29.31 0 0 46 0 19 28 0 0 1 0 1 1 7291.4 8398 2597 8095 19576 22607 22607 1 GVIDMGNSLIER Unmodified 1302.6602 0.66018561 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.67 3.09 1 1 1 66.363 66.363 2;3 1.3692E-26 22290 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 174.24 121.53 178.1 0 243.96 138.38 207.03 0 167 0 232 139 204 0 2 0 3 2 3 0 32165 8399 551 8096 19577;19578;19579 22608;22609;22610 22609 3 GVIECLK Unmodified 817.43677 0.4367746 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 55.676 55.676 2 0.010118 16656 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.79 50.556 913.85 771.17 846.82 518.23 1003.6 969.14 860 796 851 513 1014 936 3 3 3 2 3 3 69307 8400 2734 8097 19580;19581;19582 22611;22612;22613 22612 3 GVIEEPK Unmodified 770.41742 0.41741937 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 5 0 1 45.159 45.159 2 0.024772 13634 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.262 42.656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8401 3079 8098 19583 22614 22614 1 GVIINTASVAAFEGQVGQAAYSASK Unmodified 2438.2442 0.24415304 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 1 0 1 83.34 83.34 4 1.7496E-11 29265 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.425 56.945 0 0 41.116 0 8.727 20.005 0 0 38 0 9 19 0 0 1 0 1 1 1814 8402 2879 8099 19584 22615 22615 1 GVILPIWEPQDPSFGDK Unmodified 1896.9622 0.96216452 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 7 0 2 88.196 88.196 3;4 0.00024033 32484 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.522 38.05 29.845 16.82 19.119 19.628 0 0 28 18 19 19 0 0 2 2 1 1 0 0 4767.7 8403 2187 8100 19585;19586 22616;22617 22617 2 GVILTSECPGIFSAGLDLLEMYGR Unmodified 2597.2869 0.28694583 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 9 0 1 106.68 106.68 3 0.042823 37134 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 23.223 15.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8404 1541 8101 19587 22618 22618 1 GVIQAIQK Unmodified 855.5178 0.51780212 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 9 0 1 54.022 54.022 2 0.011885 15024 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.626 38.16 59.658 85.353 0 0 0 0 56 84 0 0 0 0 1 1 0 0 0 0 3653.8 8405 2886 8102 19588 22619 22619 1 GVLAPYAVPSELLLVEEIPR Unmodified 2164.2144 0.21435646 2004 Q3URE1 Acsf3 Acyl-CoA synthetase family member 3, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 96.597 96.597 3 8.591E-06 35571 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.073 43.193 0 0 0 9.837 1.9108 10.605 0 0 0 9 2 10 0 0 0 1 1 2 2192.6 8406 2004 8103 19589;19590 22620;22621 22621 2 GVLATCYNK Unmodified 1024.5012 0.50116577 348 A0A217FL60;A0A1Y7VN36;Q8K0G5 Tssc1 Protein TSSC1 yes no 0 0 0 0 8 0 1 50.93 50.93 3 0.0091548 14319 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.659 35.359 0 39.368 0 39.404 55.136 47.463 0 37 0 37 56 46 0 1 0 1 1 1 1836.2 8407 348 8104 19591 22622 22622 1 GVLEQGWQADSTTR Unmodified 1546.7376 0.73758431 2678 Q8VBV7;A0A087WPM5 Cops8 COP9 signalosome complex subunit 8 yes no 0 0 0 0 6 0 1 55.174 55.174 3 0.0011831 17813 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.885 25.939 49.176 36.052 0 0 45.122 87.19 46 37 0 0 46 83 1 1 0 0 1 1 4378 8408 2678 8105 19592 22623 22623 1 GVLFASGQNLAR Unmodified 1231.6673 0.6673199 2904 Q9CPY7;A0A0G2JEM7 Lap3 Cytosol aminopeptidase yes no 0 0 0 0 10.5 0.5 2 2 58.504 58.504 2;3 0.00098028 15476 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.879 36.961 68.982 53.546 82.939 120.22 91.249 76.28 65 56 83 120 93 74 1 1 1 2 1 1 44254 8409 2904 8106 19593;19594;19595;19596 22624;22625;22626;22627 22625 4 GVLFGVPGAFTPGCSK Unmodified 1592.8021 0.80209882 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 9.86 3.72 1 1 3 1 1 78.388 78.388 2;3;4 3.2967E-33 21184 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 148.72 131.02 1176.9 1068.4 1446.8 398.15 619.47 741.91 1108 1088 1415 396 622 706 8 8 9 5 6 7 561220 8410 1867 8107 19597;19598;19599;19600;19601;19602;19603 22628;22629;22630;22631;22632;22633;22634;22635;22636;22637 22635 10 GVLFHSGGK Unmodified 900.48175 0.48175096 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 9 0 1 43.84 43.84 3 0.011218 10332 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.436 30.913 401.33 346.79 422.55 397.7 528.7 398.52 378 358 428 396 536 388 1 1 1 1 1 1 21365 8411 1760 8108 19604 22638 22638 1 GVLFLGFPSPGSADNFLR Unmodified 1892.9785 0.97848328 475 A2AJA9 Gm996 Uncharacterized protein C9orf172 homolog yes yes 0 0 0 0 12 0 1 93.187 93.187 3 0.00011537 26687 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.073 36.995 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 2 0 5603.9 8412 475 8109 19605 22639;22640 22639 2 GVLFPFVLNLPEKPDR Unmodified 1840.0247 0.024705193 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 1 11.7 0.471 1 2 86.92 86.92 3;4 0.0016351 24584 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.328 47.922 20.244 28.427 28 0 19.197 49.554 19 28 28 0 19 47 1 1 1 0 1 2 31474 8413 2438 8110 19606;19607;19608 22641;22642;22643;22644 22643 4 GVLFYGPPGCGK Unmodified 1250.6118 0.61177885 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 12.5 0.5 1 1 65.221 65.221 2 4.4764E-09 23603 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102 62.379 9.5583 19.571 0 0 0 9.594 9 19 0 0 0 9 1 1 0 0 0 1 3434.8 8414 1875 8111 19609;19610 22645;22646 22646 2 GVLGGALAIPCHVHHLRPPHSR Unmodified 2380.2811 0.28110486 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 1 12 0 1 49.423 49.423 5 5.6995E-07 9995 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.334 43.455 60.088 0 0 0 0 78.884 56 0 0 0 0 74 1 0 0 0 0 1 6717.9 8415 2125 8112 19611 22647 22647 1 GVLHQFSGTETNR Unmodified 1444.7059 0.70589025 3338 Q9WUR9;F6TEU8 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 8 0 1 40.973 40.973 3 0.00015657 9662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.578 50.798 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8416 3338 8113 19612 22648 22648 1 GVLLFGPPGTGK Unmodified 1141.6495 0.64954457 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 8.17 5.11 2 2 1 1 72.111 72.111 2;3 4.7906E-13 20922 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.98 77.816 149.55 177.5 262.38 145.73 369.93 162.35 140 176 259 139 362 157 3 3 5 3 6 3 73224 8417 1555 8114 19613;19614;19615;19616;19617;19618 22649;22650;22651;22652;22653;22654;22655;22656 22654 8 GVLLGIDDLQTNQFK Unmodified 1659.8832 0.88318591 2003 Q3UQ44 Iqgap2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 0 8 0 1 80.362 80.362 3 0.054819 28214 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.147 12.194 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8418 2003 8115 19619 22657 22657 1 GVLLWDK Unmodified 829.46979 0.46978929 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 11.5 1.5 1 1 69.831 69.831 2 0.021458 20574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 35.123 255.15 292.21 330.9 116.32 242.75 116.23 241 296 328 120 241 111 2 2 2 1 2 1 19327 8419 1977 8116 19620;19621 22658;22659 22658 2 GVLLYGPPGCGK Unmodified 1216.6274 0.62742892 3067 Q9D5T0 Atad1 ATPase family AAA domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 62.436 62.436 3 0.00019573 17147 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.143 49.629 88.939 23.795 56 0 0 49.036 83 28 56 0 0 46 1 1 1 0 0 1 7502.7 8420 3067 8117 19622;19623 22660;22661 22660 2 GVLLYGPPGTGK Unmodified 1157.6445 0.64445919 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 10.3 0.471 2 1 62.921 62.921 2 2.1835E-14 16832 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.43 0 118.15 101.91 166.49 143.93 54.657 138.58 111 102 166 139 56 130 2 2 3 2 1 2 24092 8421 1713 8118 19624;19625;19626 22662;22663;22664 22662 3 GVLPYVGNLITK Unmodified 1272.7442 0.74417324 496 A2AN08;Z4YMA7 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 11 0 1 80.364 80.364 2 0.017299 24790 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.567 0.39706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8422 496 8119 19627 22665 22665 1 GVLRPAVLQAPQPK Unmodified 1472.8827 0.8827324 2969 Q9CT10 Ranbp3 Ran-binding protein 3 yes yes 0 0 0 1 10.5 0.5 1 1 53.412 53.412 3 0.0015885 13157 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.004 45.341 44.808 51.243 86.872 65.867 0 59.696 42 51 83 65 0 56 1 1 1 1 0 1 13905 8423 2969 8120 19628;19629 22666;22667 22666 2 GVLTGPEYEALDALPDAER Unmodified 2014.9848 0.98475045 3047 Q9D1X0 Nol3 Nucleolar protein 3 yes yes 0 0 0 0 3.5 0.5 1 1 76.668 76.668 3 5.0138E-10 28427 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.15 91.31 0 39.368 0 49.079 27.906 0 0 37 0 47 28 0 0 1 0 2 1 0 10485 8424 3047 8121 19630;19631 22668;22669 22669 2 GVLTGPEYEALDALPDAERR Unmodified 2171.0859 0.08586148 3047 Q9D1X0 Nol3 Nucleolar protein 3 yes yes 0 0 0 1 4 0 1 69.591 69.591 3 3.9275E-05 25192 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.189 43.763 29.796 27.476 18.37 8.7422 0 29.848 28 28 19 9 0 28 1 1 1 1 0 1 2357.8 8425 3047 8122 19632 22670 22670 1 GVMLAVDAVIAELK Unmodified 1427.8058 0.80578722 1766 P63038;D3Z2F2 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 9.75 0.829 2 1 1 106.1 106.1 3 7.3127E-12 37055 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.64 95.312 14.99 30.909 38.667 38.776 25.369 27.716 14 30 37 37 25 26 1 2 3 3 1 2 9839.6 8426 1766 8123 19633;19634;19635;19636 22671;22672;22673;22674;22675 22671 5 GVMLAVDAVIAELKK Unmodified 1555.9008 0.90075023 1766 P63038;D3Z2F2 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 1 11.5 1.12 1 1 1 1 98.219 98.219 3 3.7814E-05 32105 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.527 68.73 84.477 48.003 60.531 142.14 49.221 102 79 47 60 141 51 97 3 2 2 5 2 3 30428 8427 1766 8124 19637;19638;19639;19640 22676;22677;22678;22679;22680;22681;22682;22683 22678 8 GVNASAQK Unmodified 773.40317 0.40316629 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.5 0.5 1 1 33.019 33.019 2 0.0098587 6646 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.136 50.077 198.33 132.91 96.475 0 229.62 75.376 186 139 93 0 222 74 2 2 1 0 2 1 11441 8428 2148 8125 19641;19642 22684;22685 22685 2 GVNEDTYSGFLDCAR Unmodified 1702.7257 0.72569899 3075 Q9D6M3;E9Q6M6 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 7 3.54 1 1 1 1 63.26 63.26 2;3 3.9039E-25 22438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.79 125.39 108.59 34.107 114.59 65.586 90.62 134.15 102 37 111 65 93 130 2 1 2 1 2 3 30485 8429 3075 8126 19643;19644;19645;19646 22686;22687;22688;22689 22686 4 GVNFLFPIQAK Unmodified 1232.6917 0.69174374 3215 Q9JIK5 Ddx21 Nucleolar RNA helicase 2 yes yes 0 0 0 0 12 0 1 81.569 81.569 3 0.0045093 22492 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.426 28.328 20.265 0 20.456 0 18.538 38.913 19 0 19 0 19 37 1 0 1 0 1 1 1761.5 8430 3215 8127 19647 22690 22690 1 GVNIGGAGSYIYEKPQTEAPQVTGPIEVPVVR Unmodified 3324.7354 0.73540605 3153 Q9DCT8 Crip2 Cysteine-rich protein 2 yes yes 0 0 0 1 8.5 2.69 1 1 1 1 74.623 74.623 4 1.0898E-27 27029 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.967 71.26 129.24 112.05 46.971 160.06 0 158.83 121 111 46 149 0 149 3 4 1 4 0 4 29953 8431 3153 8128 19648;19649;19650;19651 22691;22692;22693;22694;22695 22691 5 GVNLPGAAVDLPAVSEK Unmodified 1635.8832 0.88318591 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 0 0 0 7.67 2.56 1 1 2 1 1 72.764 72.764 2;3;4 6.2885E-13 26046 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.36 92.924 168.66 110.98 188.81 182.89 208.72 184.1 158 112 186 176 212 177 3 2 4 3 4 3 116650 8432 1609 8129 19652;19653;19654;19655;19656;19657 22696;22697;22698;22699;22700;22701 22697 6 GVNLPGAAVDLPAVSEKDIQDLK Unmodified 2348.2587 0.25874047 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 0 0 1 7.5 2.63 1 2 1 1 1 78.617 78.617 3;4 5.7545E-12 27287 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.646 61.915 255.87 391.69 296 346.94 327.45 241.39 241 389 307 334 334 232 5 7 6 6 6 4 74878 8433 1609 8130 19658;19659;19660;19661;19662;19663 22702;22703;22704;22705;22706;22707;22708 22707 7 GVNPANYEK Unmodified 990.47706 0.47705951 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 0 6 0 1 46.414 46.414 2 0.011851 13645 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.067 38.814 48.583 54.907 83.793 55.534 36.151 0 46 56 83 56 37 0 1 1 1 1 1 0 4622.2 8434 1625 8131 19664 22709 22709 1 GVNQFGNK Unmodified 862.42972 0.42971539 2926 Q9CQF3 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 0 8 0 1 43.057 43.057 2 0.012094 10565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.777 58.636 39.188 0 86.295 74.384 72.007 57.641 37 0 83 74 74 56 1 0 1 1 1 1 5748.1 8435 2926 8132 19665 22710 22710 1 GVNSFQVYMAYK Unmodified 1405.67 0.67002202 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 11 1.22 2 1 1 70.58 70.58 2;3 9.1054E-15 20868 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 140.07 76.595 163.06 85.792 0 100.47 62.462 116.54 157 84 0 93 65 111 2 2 0 2 1 2 43141 8436 1850;2212 8133 19666;19667;19668;19669 22711;22712;22713;22714 22712 4 GVNTDSGSVCR Unmodified 1150.5037 0.50368497 1900 Q11136 Pepd Xaa-Pro dipeptidase yes yes 0 0 0 0 4 0 1 31.609 31.609 2 1.1034E-08 7632 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.25 101.64 0 0 0 60.71 26.499 0 0 0 0 56 28 0 0 0 0 1 1 0 2824.2 8437 1900 8134 19670 22715 22715 1 GVNTGAVGSYIYDKDPEGTVQP Unmodified 2266.0754 0.075356373 3153 Q9DCT8;A0A0G2JF37 Crip2 Cysteine-rich protein 2 yes no 0 0 0 1 9.5 3.5 1 1 68.415 68.415 3 9.7481E-07 24015 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.747 45.325 39.522 0 30.097 0 0 39.442 37 0 28 0 0 37 1 0 1 0 0 1 7627.5 8438 3153 8135 19671;19672 22716;22717 22716 2 GVNVSALSR Unmodified 901.49813 0.49812931 1596 P50516;D3Z1B9;D3YWH3 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 46.082 46.082 2 8.3477E-06 12854 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 153.24 77.11 642.3 1020.1 1500.8 1175.9 1366.9 1566.4 606 1023 1495 1176 1399 1506 3 5 5 4 3 5 315070 8439 1596 8136 19673;19674;19675;19676;19677 22718;22719;22720;22721;22722 22719 5 GVPALVALVASSQSVR Unmodified 1552.8937 0.89369102 1862 P98203 Arvcf Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog yes yes 0 0 0 0 1 0 1 85.572 85.572 3 0.0086176 30260 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.542 24.216 20.346 17.627 9.1727 30.269 37.679 19.746 19 18 9 28 38 19 1 2 1 1 2 1 1643.9 8440 1862 8137 19678 22723;22724 22723 2 GVPDSPER Unmodified 855.40865 0.4086456 1578 P48318 Gad1 Glutamate decarboxylase 1 yes yes 0 0 0 0 2.5 0.5 1 1 33.146 33.146 2 0.0036989 8891 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.85 53.869 138.1 116.13 197.29 135.6 242.77 150.84 130 121 195 139 243 148 1 2 2 2 2 2 31574 8441 1578 8138 19679;19680 22725;22726 22726 2 GVPLVYEAFNWR Unmodified 1449.7405 0.74048484 172 A0A0R4J0G0;Q8BH04;A0A2I3BS39;A0A2I3BRX1 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 10 0 1 84.764 84.764 2 1.1821E-05 26985 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.26 74.168 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 3929.7 8442 172 8139 19681 22727 22727 1 GVPQIEVTFDIDANGILNVSAVDK Unmodified 2513.3013 0.30133356 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 13 0 1 107.42 107.42 4 0.046907 43597 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 25.935 14.303 9.5672 0 15.1 0 8.9102 14.67 9 0 14 0 9 14 1 0 1 0 1 1 1028.6 8443 1762 8140 19682 22728 22728 1 GVPTGFVLPIR Unmodified 1154.6812 0.68117905 2804 Q922D8;A0A1W2P733;A0A1W2P7L5 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 9.5 0.5 1 1 73.535 73.535 2 0.00726 22124 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.78 26.484 78.441 40.239 127.48 111.46 178.76 128.15 74 42 125 112 180 125 2 1 2 2 2 2 22173 8444 2804 8141 19683;19684 22729;22730 22730 2 GVPTVVISQGR Unmodified 1111.635 0.63495714 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 7 0 1 52.583 52.583 2 0.0015534 15696 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.821 48.8 0 57.718 111.65 112.11 136.31 114.44 0 56 111 111 139 111 0 1 1 1 1 1 9157.6 8445 207 8142 19685 22731 22731 1 GVPVAEEVSALFAGELNPVAPK Unmodified 2193.1681 0.16813455 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 98.342 98.342 3;4 1.1543E-11 35310 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.837 54.41 20.297 14.748 23.899 30.604 37.888 63.147 19 14 23 28 37 60 1 1 2 1 2 2 5321.7 8446 1220 8143 19686;19687;19688;19689 22732;22733;22734;22735 22734 4 GVPVISVK Unmodified 797.50109 0.50108942 716 S4R1M2;D3YXK2 Safb Scaffold attachment factor B1 yes no 0 0 0 0 9.5 0.5 1 1 58.772 58.772 2 0.0090193 17366 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.33 49.54 157.48 175.41 73.88 167.2 0 187.62 148 176 74 157 0 176 2 2 1 2 0 2 13691 8447 716 8144 19690;19691 22736;22737 22736 2 GVPWNFTFNVK Unmodified 1307.6663 0.66625727 433 A2A839;A2A838;A2A842;A2A841;P48193;A2AD32 Epb4.1;Epb41 Protein 4.1 yes no 0 0 0 0 11 0 1 81.437 81.437 3 0.00084217 25226 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.657 51.445 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 4153.7 8448 433 8145 19692 22738 22738 1 GVQAGNSDTEGGQPGR Unmodified 1528.6866 0.68661137 984 F6RJ39;Q9JIX8;B8JJ91;B8JJ90;Q52KR6;B8JJ92 Acin1 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 0 3 0 1 29.956 29.956 3 4.2125E-05 7370 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.076 79.705 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2348.9 8449 984 8146 19693 22739 22739 1 GVQDIVVGEGTHFLIPWVQKPIIFDCR Unmodified 3122.6375 0.63754668 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 1 11 1.63 1 1 1 90.812 90.812 4 6.3229E-12 29110 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.911 56.279 0 0 20.558 28 76.514 18.87 0 0 19 28 75 19 0 0 1 1 2 1 16354 8450 1788 8147 19694;19695;19696 22740;22741;22742 22741 3 GVQGIIVVNTEGIPIK Unmodified 1635.956 0.95595693 1728 P62627;A2AVR9 Dynlrb1 Dynein light chain roadblock-type 1 yes no 0 0 0 0 9.33 2.62 1 1 1 76.826 76.826 3 1.4151E-11 26564 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.21 87.139 128.39 73.407 40.034 129.92 93.698 117.53 120 74 37 120 93 111 2 1 1 2 2 2 19870 8451 1728 8148 19697;19698;19699 22743;22744;22745 22744 3 GVQQVTGHGGLR Unmodified 1207.6422 0.64216778 219 Q7TMF3;A0A0R4J275;F6RBR6 Ndufa12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 0 8.67 3.09 1 1 1 33.826 33.826 3 1.4736E-13 7812 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129 101.3 29.532 132.95 223.64 189.45 176.66 165.06 28 129 222 185 176 158 1 2 3 2 2 2 28947 8452 219 8149 19700;19701;19702 22746;22747;22748 22746 3 GVQSLWGSLKPK Unmodified 1298.7347 0.73467118 222 A0A0R4J2C6;A0A0R4J2C1;Q9QXJ1;A0A087WR62;A0A087WPS7;A0A087WPI2;A0A1B0GT76;A0A087WQC5 Apbb1 Amyloid beta A4 precursor protein-binding family B member 1 yes no 0 0 0 1 6.5 5.5 1 1 66.928 66.928 3 0.0018118 16483 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.798 41.562 0 82.318 103.95 154.67 106.04 86.182 0 79 107 149 111 83 0 2 2 2 2 1 9446.5 8453 222 8150 19703;19704 22749;22750 22750 2 GVQVETISPGDGR Acetyl (Protein N-term) 1355.6681 0.66810776 1462 P26883 Fkbp1a Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 1 0 0 0 1 0 1 54.841 54.841 2 1.76E-07 17078 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.434 36.461 20.186 17.473 19.02 8.7034 0 0 19 18 19 9 0 0 1 1 1 1 0 0 4818.7 8454 1462 8151 19705 22751 22751 1 GVQVETISPGDGR Unmodified 1313.6575 0.65754307 1462 P26883 Fkbp1a Peptidyl-prolyl cis-trans isomerase FKBP1A yes yes 0 0 0 0 5.88 2.93 1 2 2 1 1 1 48.282 48.282 2;3 1.1135E-24 15377 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 170 128.41 594.62 526.46 789.01 375.28 740.1 727.75 560 542 775 366 731 700 5 5 6 5 5 4 307880 8455 1462 8151 19706;19707;19708;19709;19710;19711;19712;19713 22752;22753;22754;22755;22756;22757;22758;22759;22760;22761 22753 10 GVQYLNEIK Unmodified 1062.571 0.5709599 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 8 0 1 60.452 60.452 3 0.0011133 18861 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.749 47.525 88.74 63.176 0 0 84.521 66.878 83 65 0 0 83 65 1 1 0 0 1 1 6381.7 8456 1652 8152 19714 22762 22762 1 GVQYLNEIKDSVVAGFQWATK Unmodified 2352.2114 0.21139634 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 1 11.8 0.748 2 2 1 96.971 96.971 3;4 6.1333E-12 27841 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.79 97.697 74.555 65.161 38.04 112.41 18.545 89.573 70 65 42 106 19 87 3 2 2 4 1 4 24862 8457 1652 8153 19715;19716;19717;19718;19719 22763;22764;22765;22766;22767;22768;22769 22767 7 GVSAEYSFPLWK Unmodified 1382.6871 0.68705229 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 8.67 0.471 1 2 78.272 78.272 2;3 3.8453E-15 26601 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142 90.727 109 39.488 130.81 155.7 28.291 137.77 102 38 130 148 28 130 1 2 3 2 1 3 19815 8458 2379 8154 19720;19721;19722 22770;22771;22772 22772 3 GVSASSVPFTPSSPLLSCSQEGSR Unmodified 2436.1591 0.15910278 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 7 0 1 69.539 69.539 3 1.1104E-05 23751 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.182 39.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8459 2046 8155 19723 22773 22773 1 GVSCQFGPDVTK Unmodified 1293.6023 0.60233638 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 9.5 3.5 1 1 54.35 54.35 3 0.0022683 18254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.401 36.019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8460 2080 8156 19724;19725 22774;22775 22775 2 GVSCSEVTASSLIK Unmodified 1436.7181 0.71809442 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 8.25 2.77 1 2 1 60.083 60.083 2;3 1.6217E-11 20988 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.76 91.322 138.06 206.36 199.72 222.03 189.61 231.24 130 203 204 214 195 222 3 3 3 3 2 3 44117 8461 3275 8157 19726;19727;19728;19729 22776;22777;22778;22779 22779 4 GVSGDREENSFSLNSSISSAR Unmodified 2198.02 0.019966759 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 4.5 0.5 1 1 50.103 50.103 3 1.3837E-10 16056 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.231 76.3 40.478 0 49.808 18.899 56.372 38.899 38 0 47 19 56 38 2 0 2 1 2 2 6470.5 8462 1424 8158 19730;19731 22780;22781 22781 2 GVSPEPIHLK Unmodified 1075.6026 0.60259438 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 0 8.5 2.69 1 1 1 1 50.267 50.267 3 0.00045406 16080 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.192 40.491 168.56 126.01 143.39 63.801 204.21 260.67 158 130 139 65 204 250 2 2 2 1 2 3 47973 8463 815;2590 8159 19732;19733;19734;19735 22782;22783;22784;22785 22785 4 GVSQAVEHINK Unmodified 1180.62 0.62003536 1398 P17182;B1ARR7 Eno1 Alpha-enolase yes no 0 0 0 0 8.45 2.64 2 1 2 1 1 1 1 1 1 43.294 43.294 2;3;4 1.62E-26 11465 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 182.41 138.28 1557.8 1352.5 1280.4 1551.8 1604.8 1671.7 1464 1390 1310 1505 1655 1606 7 9 6 5 8 7 337820 8464 1398 8160 19736;19737;19738;19739;19740;19741;19742;19743;19744;19745;19746 22786;22787;22788;22789;22790;22791;22792;22793;22794;22795;22796 22789 11 GVTASSSSPASAPK Unmodified 1245.6201 0.62009493 74;1367 A0A0A6YY91;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 6 0 1 38.972 38.972 2 3.2693E-16 10212 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.81 86.475 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 1681.3 8465 74;1367 8161 19747 22797 22797 1 GVTEAHVDQK Unmodified 1082.5356 0.53563702 3037 Q9D172 D10Jhu81e ES1 protein homolog, mitochondrial yes yes 0 0 0 0 4.6 1.02 1 1 2 1 34.869 34.869 3;4 1.164E-07 8595 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.57 81.776 214.93 319.96 219.04 207.95 220.64 197.28 204 316 217 206 222 186 2 4 1 2 2 3 50564 8466 3037 8162 19748;19749;19750;19751;19752 22798;22799;22800;22801;22802 22800 5 GVTIASGGVLPNIHPELLAK Unmodified 1985.131 0.13096118 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 0 9 0 2 74.544 74.544 3;4 3.1243E-10 24773 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.565 70.281 88.74 113.18 0 39.373 134.17 0 83 112 0 37 130 0 1 2 0 1 2 0 16532 8467 3296 8163 19753;19754 22803;22804 22804 2 GVTIIGPATVGGIKPGCFK Unmodified 1871.0339 0.033889671 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 1 11 0.707 1 2 1 70.623 70.623 3;4 7.7315E-08 20361 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.95 68.292 138.69 330.83 287.99 47.449 37 108.73 130 321 281 46 37 102 2 2 2 1 1 1 71054 8468 2020 8164 19755;19756;19757;19758 22805;22806;22807;22808 22807 4 GVTIPYRPK Unmodified 1029.5971 0.59711507 394 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8W6U6;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VI15;A0A2R8VI92;A0A2R8W6H3 Pcbp2 Poly(rC)-binding protein 2 yes no 0 0 0 1 10 0 1 48.277 48.277 3 0.024239 11083 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.23 34.707 0 127.68 0 0 193.86 172.49 0 120 0 0 191 167 0 1 0 0 1 1 33389 8469 394 8165 19759 22809 22809 1 GVTQIDNDLK Deamidation (N) 1102.5506 0.55061839 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 1 0 0 4 0 1 53.568 53.568 2 0.014561 17970 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.325 37.758 29.724 17.563 38.83 0 0 69.29 28 19 37 0 0 65 1 1 1 0 0 1 1672.8 8470 3376 8166 19760 22810 22810 1138 1 GVTQIDNDLK Unmodified 1101.5666 0.5666028 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 54.021 54.021 2;3 8.1814E-06 17953 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.23 77.509 157.02 167.58 213.79 208.71 203.79 95.176 148 167 213 204 204 93 3 3 3 3 2 1 44790 8471 3376 8166 19761;19762;19763;19764 22811;22812;22813;22814 22811 4 GVVDSDDLPLNVSR Unmodified 1484.7471 0.74708636 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 4 0 2 63.204 63.204 2;3 3.1723E-16 22371 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.97 94.441 23.484 0 30.178 0 37.688 29.519 22 0 28 0 37 28 1 0 2 0 2 1 18854 8472 1324 8167 19765;19766 22815;22816 22816 2 GVVDSEDLPLNISR Unmodified 1512.7784 0.77838649 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 6.88 3.72 1 2 1 1 1 2 66.902 66.902 2;3 7.3167E-149 23240 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 255.41 0 266.69 245.26 301.62 338.64 465.7 335.09 251 241 296 334 463 324 6 6 5 6 6 6 541390 8473 1322;1354 8168 19767;19768;19769;19770;19771;19772;19773;19774 22817;22818;22819;22820;22821;22822;22823;22824;22825;22826 22822 10 GVVESVVTIEDDFITVVQTTTDEGESGSHSVR Unmodified 3391.6267 0.62670304 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 4.5 0.5 1 1 104.9 104.9 4 2.7847E-20 36264 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.927 55.821 3.1933 0 4.3119 0 0 0 3 0 4 0 0 0 1 0 1 0 0 0 2184.3 8474 1424 8169 19775;19776 22827;22828 22828 2 GVVFLYR Unmodified 852.48577 0.48577371 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 10.5 0.5 1 1 61.899 61.899 2 0.00095215 16399 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 157.88 113.14 616.98 178.75 0 435.01 217.93 202.72 575 168 0 398 215 196 1 1 0 1 1 1 111110 8475 2125 8170 19777;19778 22829;22830 22830 2 GVVGLFK Unmodified 718.43776 0.43776088 2261 Q6ZPE2;F7BBM8;F6ZDC5;E9Q0D4;E9Q305;E9PXF8 Sbf1;Sbf2 Myotubularin-related protein 5 yes no 0 0 0 0 11 0 1 65.771 65.771 2 0.026368 18161 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.511 34.948 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 0 0 13635 8476 2261 8171 19779 22831 22831 1 GVVHVYTR Unmodified 929.5083 0.50830006 449 A2AE27;Q9DBT5 Ampd2 AMP deaminase 2 yes no 0 0 0 0 7.5 0.5 1 1 34.005 34.005 3 0.014586 6497 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.426 18.763 49.074 56.275 49.772 0 133.07 84.681 46 56 46 0 130 83 1 1 1 0 2 2 5194.1 8477 449 8172 19780;19781 22832;22833 22833 2 GVVLFPWQAR Unmodified 1171.6502 0.65021327 995 F6SQH7;Q91VA6 Poldip2 Polymerase delta-interacting protein 2 yes no 0 0 0 0 12 0 1 77.754 77.754 2 3.5614E-05 21015 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.52 86.712 0 77.399 79.97 116.56 0 88.478 0 74 83 111 0 83 0 1 1 1 0 1 8099.8 8478 995 8173 19782 22834 22834 1 GVVLGGCGDK Unmodified 960.46987 0.46986564 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 48.762 48.762 2 5.0212E-05 13888 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.71 54.789 69.451 0 87.38 46.6 75.263 108.73 65 0 83 46 74 102 1 0 2 1 1 1 23021 8479 1702 8174 19783;19784 22835;22836 22835 2 GVVNILPGSGSLVGQR Unmodified 1551.8733 0.87328993 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 10.5 0.5 1 1 69.193 69.193 2 5.0458E-05 19646 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.045 45.235 39.701 0 0 63.441 0 0 37 0 0 60 0 0 1 0 0 2 0 0 13614 8480 2633 8175 19785;19786 22837;22838 22838 2 GVVPGGGLK Unmodified 782.46504 0.46503826 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 8 0 1 50.247 50.247 3 0.016182 14002 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.059 27.503 0 0 0 50.278 0 39.442 0 0 0 46 0 37 0 0 0 1 0 1 4405.9 8481 1972 8176 19787 22839 22839 1 GVVPLAGTDGETTTQGLDGLLER Unmodified 2298.1703 0.17031939 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 6.17 3.13 2 2 1 1 79.851 79.851 3;4 7.5387E-35 29213 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.21 112.11 109.51 180.35 156.64 151.11 243.21 185.58 103 177 158 149 243 177 5 6 4 5 6 4 212660 8482 1308 8177 19788;19789;19790;19791;19792;19793 22840;22841;22842;22843;22844;22845;22846;22847;22848 22846 9 GVVPLAGTNGETTTQGLDGLSER Deamidation (N) 2272.1183 0.11828382 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 0 6 3.23 3 2 2 3 1 2 69.09 69.09 3;4 1.7442E-80 24580 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 174.2 157.89 352.32 339.32 514.05 265.87 374.85 401.42 331 342 501 259 372 382 11 12 14 7 9 12 684070 8483 1309 8178 19794;19795;19796;19797;19798;19799;19800;19801;19802;19803;19804;19805;19806 22849;22850;22851;22852;22853;22854;22855;22856;22857;22858;22859;22860;22861;22862;22863;22864;22865;22866;22867 22857 369 19 GVVPLAGTNGETTTQGLDGLSER Unmodified 2271.1343 0.13426824 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 7 3.54 1 1 1 1 66.464 66.464 3 1.9391E-67 23730 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 168.81 154.04 98.809 72.856 102.99 75.233 55.691 87.675 93 74 102 75 56 83 3 2 3 3 2 2 96632 8484 1309 8178 19807;19808;19809;19810 22868;22869;22870;22871 22869 4 GVVQDLQQAISK Unmodified 1284.7038 0.70376498 203 A0A0R4J1E2;E9QN08;Q80T06;F6ZFU0;P57776;A0A0R4J1L2;Q91VK2;D3YUQ9;D3Z7N2;D3YZT9 Eef1d Elongation factor 1-delta yes no 0 0 0 0 7.5 0.5 1 1 70.811 70.811 2;3 3.9194E-10 23664 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.76 77.573 48.6 64.669 72.593 75.189 72.667 37.368 46 65 74 74 74 37 1 1 1 1 1 1 8162.2 8485 203 8179 19811;19812 22872;22873 22873 2 GVVTNGLDVSPAEEK Deamidation (N) 1514.7464 0.74641766 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 1 0 0 3.83 0.687 2 3 1 61.423 61.423 3 9.7961E-11 21417 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.58 99.095 287.1 137.74 173.07 105.35 92.609 214.82 269 139 167 102 93 204 5 3 3 2 2 3 28441 8486 154 8180 19813;19814;19815;19816;19817;19818 22874;22875;22876;22877;22878;22879;22880 22877 63 7 GVVVATGDR Unmodified 872.47158 0.4715802 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8 2.58 1 1 1 1 1 1 37.426 37.426 2 2.4523E-08 9920 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 166.68 89.904 495.29 1010.8 859.74 1164.9 1123.5 1156.5 466 993 867 1132 1157 1115 4 5 3 6 4 5 721970 8487 106 8181 19819;19820;19821;19822;19823;19824 22881;22882;22883;22884;22885;22886 22881 6 GVWSELSK Unmodified 904.46543 0.46543219 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 13 0 1 61.824 61.824 2 0.051648 22048 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.969 27.612 147.59 95.566 180.01 137.03 221.73 0 139 102 178 139 218 0 1 1 1 1 1 0 8127.7 8488 3204 8182 19825 22887 22887 1 GVYAIFGFYDK Unmodified 1278.6285 0.62847478 1104 G5E8H1 Gria2 no no 0 0 0 0 11 0 1 85.15 85.15 2 0.0042113 26789 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.847 23.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2826.4 8489 1104 8183 19826 22888 22888 1 GVYAIFGFYDKK Unmodified 1406.7234 0.72343779 1104 G5E8H1 Gria2 no no 0 0 0 1 12 0 1 76.33 76.33 4 0.00060661 20408 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.624 44.796 29.904 27.776 0 29.725 46.751 0 28 28 0 28 46 0 1 1 0 1 1 0 1678.6 8490 1104 8184 19827 22889 22889 1 GVYAIFGFYER Unmodified 1320.6503 0.65027285 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 11 0 1 82.572 82.572 2 0.030612 25827 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.482 35.251 0 0 29.465 18.653 19.017 0 0 0 28 19 19 0 0 0 1 1 1 0 1417.3 8491 2286 8185 19828 22890 22890 1 GVYAVGDVCGK Unmodified 1123.5332 0.53319418 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 7 0 1 54.296 54.296 3 0.0021332 16483 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.102 41.571 0 0 47.226 57.164 65.364 0 0 0 46 56 65 0 0 0 1 1 1 0 4930.1 8492 1566 8186 19829 22891 22891 1 GVYIIGSSGFDSIPADLGVLYTR Unmodified 2399.2373 0.23727674 2635 Q8R127 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes yes 0 0 0 0 8.5 0.5 1 1 95.519 95.519 3 6.218E-12 34145 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.916 53.624 0 0 23 0 0 0 0 0 23 0 0 0 0 0 1 0 0 0 2137.8 8493 2635 8187 19830;19831 22892;22893 22893 2 GVYSEETLR Unmodified 1052.5138 0.51383895 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7.33 4.03 1 1 1 43.568 43.568 2 2.1878E-06 12933 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 159.46 110.13 187.23 139.37 283.73 149.84 144.97 155.47 176 139 277 148 148 148 2 2 3 2 2 2 49329 8494 2517 8188 19832;19833;19834 22894;22895;22896 22896 3 GVYVLMSGLDLER Unmodified 1450.749 0.74900062 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 9 0 1 83.518 83.518 3 0.00017454 28876 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.412 42.013 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1872.5 8495 3202 8189 19835 22897 22897 1 GWAAAVTFNPQAR Unmodified 1387.6997 0.69968266 2062 Q5SUR0;F6RUL9 Pfas Phosphoribosylformylglycinamidine synthase yes no 0 0 0 0 10.5 0.5 1 1 65.136 65.136 2 0.00058989 17734 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.387 36.425 9.4173 0 40.29 17.476 47.313 0 9 0 38 19 46 0 1 0 1 1 1 0 5372.3 8496 2062 8190 19836;19837 22898;22899 22899 2 GWAPTLIGYSMQGLCK Unmodified 1780.864 0.86404715 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 6 5 1 1 84.802 84.802 3 6.1738E-08 26470 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.02 93.426 20.387 0 0 40.441 0 0 19 0 0 37 0 0 1 0 0 1 0 0 16500 8497 2715 8191 19838;19839 22900;22901 22901 2 GWDDLFNK Unmodified 993.4556 0.45559579 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11 2 1 1 74.077 74.077 2 0.011684 24555 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.439 56.044 69.387 67.383 166.56 0 141.8 164.38 65 65 158 0 139 158 1 1 2 0 1 2 15828 8498 3204 8192 19840;19841 22902;22903 22902 2 GWDENVYYTVPLVR Unmodified 1709.8413 0.8413211 1237 O55125 Nipsnap1 Protein NipSnap homolog 1 yes yes 0 0 0 0 8 2.92 2 1 1 76.511 76.511 2;3 4.2199E-20 27903 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.82 92.871 29.754 57.578 58.978 86.507 104.07 27.935 28 56 56 83 102 28 1 1 1 2 2 1 36078 8499 1237 8193 19842;19843;19844;19845 22904;22905;22906;22907 22905 4 GWDTLYWTSYTTSTITR Unmodified 2050.9636 0.96362108 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 9 0 1 83.211 83.211 3 4.021E-06 28756 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.583 56.699 16.996 15.615 15.747 12.177 0 0 16 16 16 12 0 0 1 1 1 1 0 0 2825 8500 175 8194 19846 22908 22908 1 GWEEGVAQMSVGQR Unmodified 1532.7042 0.70417569 1462 P26883;F6X9I3 Fkbp1a Peptidyl-prolyl cis-trans isomerase FKBP1A;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 7.2 2.99 2 1 1 1 60.166 60.166 2;3 1.1008E-104 20906 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 198.33 136.98 217.09 165.93 194.8 187.18 239.29 172.52 204 167 194 185 241 167 4 3 3 4 4 3 57503 8501 1462 8195 19847;19848;19849;19850;19851 22909;22910;22911;22912;22913;22914 22914 6 GWENHVEGQK Unmodified 1182.5418 0.54178503 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5 0 1 40.317 40.317 3 0.0022034 11319 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.73 34.117 79.402 0 0 89.163 82.722 0 74 0 0 83 83 0 1 0 0 1 1 0 4576.6 8502 3204 8196 19852 22915 22915 1 GWFEPIVEDMHR Unmodified 1514.6976 0.69763375 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 0 6.5 0.5 1 1 72.172 72.172 3 0.00020499 25788 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.46 53.998 0 0 49.981 19.594 0 99.138 0 0 47 19 0 93 0 0 2 1 0 2 8238.2 8503 1325 8197 19853;19854 22916;22917 22916 2 GWFPFSYTR Unmodified 1159.5451 0.5450795 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8 4.97 1 1 1 77.29 77.29 2 3.2271E-05 20764 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 139.88 89.837 385.52 405.71 144.05 395.34 173.24 404.4 362 408 148 368 185 384 4 4 2 3 1 3 53845 8504 607 8198 19855;19856;19857 22918;22919;22920;22921 22921 4 GWGLYCAGK Unmodified 1010.4644 0.46438634 2766 Q91XH5;G3UXX3;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 10.5 0.5 1 1 60.986 60.986 2 3.5296E-05 16487 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.87 94.836 78.622 52.841 86.239 0 82.835 115.96 74 56 83 0 83 111 1 1 1 0 1 1 12476 8505 2766 8199 19858;19859 22922;22923 22922 2 GWIDWAASK Unmodified 1032.5029 0.50288033 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 0 0 0 0 10.8 1.48 1 1 1 1 73.47 73.47 2 0.0006489 24221 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.12 76.311 281.63 71.164 215.44 0 207.12 251 264 74 204 0 203 241 3 1 2 0 2 3 24861 8506 2687 8200 19860;19861;19862;19863 22924;22925;22926;22927;22928 22925 5 GWIDWAATK Unmodified 1046.5185 0.5185304 2454 Q8BTG7 Ndrg4 Protein NDRG4 no no 0 0 0 0 9 0 1 73.754 73.754 2 0.0014547 24371 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.9 49.316 98.671 79.647 120.36 94.476 0 0 93 83 120 93 0 0 1 1 1 1 0 0 9407.1 8507 2454 8201 19864 22929 22929 1 GWLTINNIGIMK Unmodified 1358.738 0.738042 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 9 4.64 1 1 2 82.87 82.87 2;3 3.2083E-49 22891 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 204.5 135.84 97.993 91.32 101.33 91.961 59.588 137.72 92 93 97 88 60 130 2 3 2 3 2 3 56094 8508 118;1534 8202 19865;19866;19867;19868 22930;22931;22932;22933 22933 4 GWLTINNIGIMK Deamidation (N) 1359.7221 0.72205759 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 0 0 10 0 1 85.442 85.442 3 0.0057174 27337 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.401 33.551 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 5516.9 8509 118;1534 8202 19869 22934 22934 53 1 GWLTINNIGIMK Oxidation (M);Deamidation (N) 1375.717 0.71697221 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 1 0 12 0 1 82.563 82.563 3 0.010214 22917 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.44 20.698 39.225 26.182 57.741 0 48.116 0 37 28 55 0 46 0 1 1 1 0 1 0 1711.5 8510 118;1534 8202 19870 22935 22935 53 13 1 GWLTINNISLMK Unmodified 1388.7486 0.74860669 1082 Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3;G3UXX2 Dnm2 Dynamin-2 yes no 0 0 0 0 12 0 1 83.874 83.874 3 8.197E-05 23239 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.813 62.208 0 39.368 0 49.593 36.424 0 0 37 0 46 37 0 0 1 0 1 1 0 2027.6 8511 1082 8203 19871 22936 22936 1 GWLVDLLNK Unmodified 1056.5968 0.59678072 1813 Q4FE56;P70398;E9PWA9 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 11.5 0.5 1 1 88.93 88.93 2;3 0.008865 25369 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.827 20.393 24.395 22.345 28.832 0 0 0 23 23 28 0 0 0 1 1 1 0 0 0 3932.2 8512 1813 8204 19872;19873 22937;22938 22938 2 GWMDWAAHK Unmodified 1100.4862 0.48618441 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BPW0;A0A2I3BPL1 Ndrg2 Protein NDRG2 no no 0 0 0 0 10.7 1.7 1 1 1 63.274 63.274 3 0.0008403 17479 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.308 28.631 345.09 133.49 427.78 0 442.47 331.19 324 139 401 0 430 315 3 2 3 0 3 2 58569 8513 3277;377 8205 19874;19875;19876 22939;22940;22941;22942 22941 4 GWNILTNSEK Unmodified 1160.5826 0.58258722 2736 Q91VD9;A0A087WQR0 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 8.33 0.471 2 1 65.803 65.803 2;3 5.7583E-05 21310 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.83 48.236 237.45 172.62 160.59 198.84 249.79 105.61 223 176 167 194 251 102 3 2 2 2 3 2 39102 8514 2736 8206 19877;19878;19879 22943;22944;22945 22944 3 GWNYILEK Unmodified 1021.5233 0.52328142 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 9 0 1 71.016 71.016 3 0.034278 23158 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.283 7.8513 20.052 48.399 15.354 49.363 0 0 19 47 19 46 0 0 1 1 1 1 0 0 2958.6 8515 2848 8207 19880 22946 22946 1 GWPLYLSTK Unmodified 1063.5702 0.57023162 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 9.2 4.17 1 1 1 2 73.106 73.106 2;3 0.0018502 22024 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.635 39.776 229.39 231.83 344.14 108.28 361.75 120.31 216 232 335 106 352 117 3 3 4 3 4 3 97300 8516 1278 8208 19881;19882;19883;19884;19885 22947;22948;22949;22950;22951 22948 5 GWVKPVIGSEYPLEK Unmodified 1700.9138 0.91375776 1560 P47199 Cryz Quinone oxidoreductase yes yes 0 0 0 1 9.5 0.5 1 1 69.471 69.471 3;4 0.0042678 22372 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.112 33.037 128.44 72.988 172.02 81.89 229.5 0 121 74 167 83 223 0 2 1 2 1 2 0 12198 8517 1560 8209 19886;19887 22952;22953 22952 2 GWVNTLVGGQK Unmodified 1157.6193 0.61930707 986 F6RPJ9;Q9JHR7 Ide Insulin-degrading enzyme yes no 0 0 0 0 11 0 1 66.605 66.605 2 0.00097423 18494 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.143 29.252 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8518 986 8210 19888 22954 22954 1 GYADIVQLLLAK Unmodified 1302.7547 0.75473792 2156 Q62422 Ostf1 Osteoclast-stimulating factor 1 yes yes 0 0 0 0 11.5 0.5 1 1 97.955 97.955 3 0.00058487 27966 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.64 49.95 0 0 0 20.767 0 48.254 0 0 0 19 0 47 0 0 0 1 0 2 11233 8519 2156 8211 19889;19890 22955;22956;22957 22957 3 GYAFITFCGK Unmodified 1162.5481 0.54811597 2719 Q8VHM5;A2AW41;F7B5B5 Hnrnpr yes no 0 0 0 0 11.5 0.5 1 1 71.705 71.705 2 0.0028785 20823 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.998 74.664 0 29.792 47.706 86.814 56.446 39.442 0 28 46 83 56 37 0 1 1 2 1 1 8680.5 8520 2719 8212 19891;19892 22958;22959 22958 2 GYAFNHSADFETVR Unmodified 1612.727 0.72701962 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 50.695 50.695 3 2.9125E-07 16340 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.23 96.974 156.73 133.39 342.17 209.69 144.7 123.79 148 139 333 213 149 120 2 2 3 3 2 2 69472 8521 1690 8213 19893;19894;19895;19896 22960;22961;22962;22963 22963 4 GYALLIDCR Unmodified 1079.5434 0.54336494 3300 Q9R0N0 Galk1 Galactokinase yes yes 0 0 0 0 8 0 1 63.083 63.083 2 0.023411 19986 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.999 33.601 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5065.1 8522 3300 8214 19897 22964 22964 1 GYALTAIMK Unmodified 966.52084 0.52083858 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 10 0 1 67.779 67.779 3 0.0026593 19472 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.919 0 49.358 0 0 30.604 0 39.442 46 0 0 28 0 37 1 0 0 1 0 1 2288.9 8523 1436 8215 19898 22965 22965 1 GYDDRDYYSR Unmodified 1308.5371 0.53709359 1053 F8WJG3;P62996 Tra2b Transformer-2 protein homolog beta yes no 0 0 0 1 3 0 1 36.366 36.366 3 0.0045686 10371 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.525 43.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8524 1053 8216 19899 22966 22966 1 GYDFAAVLEWFAER Unmodified 1672.7886 0.78855725 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 13 0 1 105.73 105.73 3 0.0014058 43093 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.793 41.254 0 0 0 30.098 26.907 29.08 0 0 0 28 28 28 0 0 0 1 1 1 1569 8525 3271;3353 8217 19900 22967 22967 1 GYDSDNPR Unmodified 922.37807 0.37807375 1391 P16332 Mut Methylmalonyl-CoA mutase, mitochondrial yes yes 0 0 0 0 8 5 1 1 27.068 27.068 2 0.030317 5261 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.138 37.314 88.196 61.662 92.765 83.433 102.54 9.3345 83 65 93 83 102 9 1 1 1 1 2 1 4143.6 8526 1391 8218 19901;19902 22968;22969 22969 2 GYDVIAQAQSGTGK Unmodified 1393.6838 0.68375782 1345;1679 P10630;Q8BTU6;A0A338P6X5;P60843 Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 8.5 2.69 1 1 1 1 55.698 55.698 2;3 4.509E-14 18859 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.011 63.597 99.474 120.98 63.444 136.96 71.615 67.246 93 121 65 130 74 65 1 2 1 2 1 1 25943 8527 1345;1679 8219 19903;19904;19905;19906 22970;22971;22972;22973 22973 4 GYDYGPQFQGICEATLEGEQGK Unmodified 2446.0747 0.074704446 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 4.5 0.5 1 1 72.375 72.375 3 4.4384E-08 26448 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.467 52.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8528 1412 8220 19907;19908 22974;22975 22974 2 GYEEWLLNEIR Unmodified 1420.6987 0.69867961 418;310;3209 A1BN54;Q7TPR4;A0A1L1SV25;P57780;Q9JI91 Actn1;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 0 6 0.707 1 2 1 81.247 81.247 2;3 5.8183E-05 30006 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.254 70.086 148.89 167.35 81.208 78.631 130.05 67.416 140 168 84 74 130 65 4 4 3 2 3 1 32486 8529 418;310;3209 8221 19909;19910;19911;19912 22976;22977;22978;22979 22978 4 GYFDALVK Unmodified 911.47527 0.4752686 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8.5 0.5 1 1 69.075 69.075 2 0.0062124 22111 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.86 64.145 176.62 163.89 113.04 78.943 103.07 108.73 166 167 111 74 102 102 2 2 1 1 1 1 32280 8530 607 8222 19913;19914 22980;22981 22981 2 GYFDEEMNR Unmodified 1159.4604 0.46042317 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 51.358 51.358 2 0.053409 16955 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.235 4.938 58.885 25.821 0 50.278 0 69.29 55 28 0 46 0 65 1 1 0 1 0 1 3474.3 8531 3266 8223 19915 22982 22982 1 GYFEYIEENK Unmodified 1290.5768 0.57683314 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 9 4 1 1 69.115 69.115 2;3 3.6968E-05 25350 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.048 55.623 68.682 101.79 125.75 29.173 188.88 95.919 65 102 120 28 185 93 1 2 1 1 2 1 23416 8532 2714 8224 19916;19917 22983;22984 22984 2 GYFIQPTVFGDVK Unmodified 1469.7555 0.7554662 1562 P47738;A0A0G2JEU1;A0A0G2JF60 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 9 0.816 1 1 1 78.5 78.5 3 7.6685E-05 26584 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.466 60.634 226.84 70.148 284.38 205.35 55.813 118.33 213 74 278 195 56 111 2 1 3 2 1 1 56253 8533 1562 8225 19918;19919;19920 22985;22986;22987;22988 22986 4 GYFSAVPK Unmodified 867.44905 0.44905385 532 A2AWA9;A2AWA7 Rabgap1 Rab GTPase-activating protein 1 yes no 0 0 0 0 10 0 1 56.963 56.963 2 0.042513 14664 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.682 25.736 49.358 0 0 0 37.384 38.375 46 0 0 0 37 37 1 0 0 0 1 1 2580.5 8534 532 8226 19921 22989 22989 1 GYGAGVITVFK Unmodified 1110.6073 0.6073454 2533 Q8CG72 Adprhl2 Poly(ADP-ribose) glycohydrolase ARH3 yes yes 0 0 0 0 10 0 1 70.307 70.307 2 6.2275E-08 20647 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.33 86.399 39.564 27.124 0 39.404 55.136 47.463 37 28 0 37 56 46 1 1 0 1 1 1 2892.5 8535 2533 8227 19922 22990 22990 1 GYGFGLIK Unmodified 853.46979 0.46978929 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 67.95 67.95 2;3 0.0020578 19653 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.96 82.054 4761.1 2458.9 7119.3 6704.7 3745.1 3820 4475 2677 6992 6573 3996 3644 6 4 5 5 6 5 1079400 8536 978;2097 8228 19923;19924;19925;19926;19927;19928 22991;22992;22993;22994;22995;22996;22997 22994 7 GYGFGMVK Unmodified 857.41056 0.41055985 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 9.5 0.5 1 1 60.204 60.204 2 0.0020578 17936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 129.96 84.988 488.27 228.48 338.41 411.81 335.74 302.76 458 251 332 401 349 293 2 2 1 2 2 2 52700 8537 1141 8229 19929;19930 22998;22999 22998 2 GYGFVSFFNK Unmodified 1164.5604 0.56039521 718 D3YY02;Q8CII5;G5E8L2;Q80ZW7;D3Z4H6;P52912 Tia1 Nucleolysin TIA-1 yes no 0 0 0 0 11.5 0.5 1 1 79.599 79.599 2 2.9639E-05 21551 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.74 86.387 63.849 0 89.279 28.882 0 0 60 0 84 28 0 0 2 0 2 1 0 0 6756.4 8538 718 8230 19931;19932 23000;23001 23001 2 GYGFVSFYNK Unmodified 1180.5553 0.55530983 227 A0A0U1RPD3;D3Z3Y4;Q921W2;P70318 Tial1 Nucleolysin TIAR yes no 0 0 0 0 11 0 1 69.658 69.658 2 0.0058762 19907 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.269 54.128 0 0 49.772 0 0 49.036 0 0 46 0 0 46 0 0 1 0 0 1 5182.6 8539 227 8231 19933 23002 23002 1 GYGGYIASMILK Unmodified 1271.6584 0.6583947 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 11 0 1 81.585 81.585 3 0.003512 25349 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.359 28.346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8540 967 8232 19934 23003 23003 1 GYGIATPK Unmodified 805.4334 0.43340378 1104;2286 Q7TNB5;P23818;F6YNQ1;G5E8H1 Gria1;Gria2 Glutamate receptor 1 no no 0 0 0 0 8 0.816 1 1 1 48.295 48.295 2 0.010921 12996 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.531 48.464 63.593 172.09 158.49 195.48 109 288.97 60 167 153 185 120 274 1 2 2 2 2 3 63986 8541 2286;1104 8233 19935;19936;19937 23004;23005;23006 23005 3 GYGPDGHFGMFPANYVELIE Unmodified 2211.9935 0.993541 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 13 0 1 90.503 90.503 3 1.8326E-05 35954 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.773 35.856 20.069 18.227 38.015 18.501 0 49.036 19 19 37 19 0 46 1 1 1 1 0 1 4258.1 8542 2154 8234 19938 23007 23007 1 GYGVATPK Unmodified 791.41775 0.41775372 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 8 0 1 43.902 43.902 3 0.031045 11057 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.358 11.809 59.428 64.209 56.44 0 46.477 47.71 56 65 56 0 46 46 1 1 1 0 1 1 3669.2 8543 565 8235 19939 23008 23008 1 GYGYGQGAGTLSTDKGESLGIK Unmodified 2158.0542 0.054227 1842 P97315 Csrp1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 1 8.5 2.69 1 1 1 1 60.369 60.369 3;4 4.1483E-16 18822 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.99 83.363 147.88 58.173 296.52 288.51 399.31 383.03 139 56 287 287 407 370 2 1 3 4 4 4 38329 8544 1842 8236 19940;19941;19942;19943 23009;23010;23011;23012 23011 4 GYHLLKPMGK Unmodified 1142.627 0.62703499 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 1 12 0 1 50.679 50.679 4 0.0015031 10434 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.827 37.522 0 647.97 891.64 0 1243.5 980.41 0 623 860 0 1221 953 0 1 1 0 1 1 32185 8545 2162 8237 19944 23013 23013 1 GYHTECTK Unmodified 994.41783 0.41783007 62 A0A0A6YWG7 Rapgef2 yes yes 0 0 0 0 6 0 1 28.96 28.96 3 0.028996 5520 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.04 31.601 48.834 25.388 66.471 46.899 27.134 0 46 28 65 47 28 0 1 1 1 1 1 0 1190.2 8546 62 8238 19945 23014 23014 1 GYHYIIANLGFTDGDLLK Unmodified 2009.0258 0.025827405 1104 G5E8H1 Gria2 no no 0 0 0 0 9 0 1 82.91 82.91 3 0.0015456 28576 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.391 17.955 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2817.7 8547 1104 8239 19946 23015 23015 1 GYICIFDIR Unmodified 1155.5747 0.57466507 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 9 0 1 77.127 77.127 2 0.018174 25977 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.682 34.212 88.891 33.374 0 46 0 69.29 83 37 0 46 0 65 1 1 0 1 0 1 3291.2 8548 570 8240 19947 23016;23017 23016 2 GYIDLSK Unmodified 794.41742 0.41741937 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 8 0 1 57.116 57.116 2 0.012613 17237 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.323 36.357 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8549 2269 8241 19948 23018 23018 1 GYIGVVNR Unmodified 876.48175 0.48175096 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 0 0 0 9.83 2.11 1 1 1 1 1 1 45.747 45.747 2 0.0016338 12015 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.01 77.24 996.79 768.11 1111.5 1215.3 1131.7 1754.3 933 760 1107 1188 1163 1673 6 4 5 6 7 6 414030 8550 118;1534;1082 8242 19949;19950;19951;19952;19953;19954 23019;23020;23021;23022;23023;23024;23025;23026 23020 8 GYISPYFINTSK Unmodified 1388.6976 0.69761697 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.89 3.41 1 1 3 1 1 2 69.647 69.647 2;3;4 2.2435E-22 19818 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 162.38 123.81 445.04 351.91 310.4 405.98 317.54 538.18 417 353 305 389 315 510 6 6 5 7 5 7 225440 8551 1766 8243 19955;19956;19957;19958;19959;19960;19961;19962;19963 23027;23028;23029;23030;23031;23032;23033;23034;23035;23036 23032 10 GYIVIEDLWK Unmodified 1234.6598 0.6597749 3158 Q9DCZ4 Apoo Apolipoprotein O yes yes 0 0 0 0 10.5 2.5 1 1 86.278 86.278 2 0.0022632 31119 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.67 53.408 39.298 0 67.663 92.424 93.103 47.445 37 0 65 93 93 47 1 0 1 2 1 1 4989.9 8552 3158 8244 19964;19965 23037;23038 23037 2 GYIWNYGAIPQTWEDPGHSDK Unmodified 2433.1026 0.10257418 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 13 0 1 74.793 74.793 4 0.037471 28300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 29.636 14.214 69.522 44.256 0 0 66.371 47.142 65 46 0 0 65 46 1 1 0 0 1 1 5847 8553 3085 8245 19966 23039 23039 1 GYIWNYGALPQTWEDPHLR Unmodified 2315.1124 0.112351 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 9 0 1 77.881 77.881 3 0.00064872 26363 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.537 36.688 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8554 2743 8246 19967 23040 23040 1 GYLAAIK Unmodified 734.43268 0.4326755 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 10 0.707 1 2 1 58.073 58.073 2;3 0.0060976 14762 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 140.79 59.118 1507.2 857.81 956.15 817.73 1167.3 1071.6 1414 882 966 809 1162 1020 5 4 3 3 4 4 293520 8555 90 8247 19968;19969;19970;19971 23041;23042;23043;23044;23045;23046 23045 6 GYLDKLEPSK Unmodified 1148.6077 0.60773933 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 9.43 2.38 2 1 2 2 57.72 57.72 3;4 9.4664E-05 19811 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.55 69.368 2942.5 3038.9 3211.1 3052.4 3093.1 4012.6 2768 3093 3194 3021 3181 3847 5 7 4 7 4 6 456540 8556 1881 8248 19972;19973;19974;19975;19976;19977;19978 23047;23048;23049;23050;23051;23052;23053 23053 7 GYLGPEQLPDCLK Unmodified 1488.7283 0.72826518 1327 P08249;A0A0G2JF23 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 7 2.77 2 2 1 1 68.877 68.877 2;3 1.1239E-14 24171 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.2 97.862 469.97 583.05 458.02 478.45 624.54 779.55 441 582 458 467 636 748 3 5 5 5 4 6 425920 8557 1327 8249 19979;19980;19981;19982;19983;19984 23054;23055;23056;23057;23058;23059 23056 6 GYLISGSSYAR Unmodified 1172.5826 0.58258722 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 10.7 1.7 1 1 1 52.001 52.001 2 6.4712E-08 14046 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.3 77.653 0 48.944 127.12 132.21 122.71 0 0 46 120 130 120 0 0 1 1 2 1 0 20675 8558 2264 8250 19985;19986;19987 23060;23061;23062 23060 3 GYLLYGPPGCGK Unmodified 1280.6223 0.62234354 3007 Q9CZP5 Bcs1l Mitochondrial chaperone BCS1 yes yes 0 0 0 0 10 0 1 63.718 63.718 3 0.038016 17662 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.783 22.25 88.08 0 164.62 132.28 0 178.02 83 0 158 130 0 167 1 0 1 1 0 1 3910.7 8559 3007 8251 19988 23063 23063 1 GYLQALASK Unmodified 949.52328 0.52328142 2297 Q7TT50;F6YZJ7;F6S5Z6;F6Q5A5;H7BX44;D3YYN8;E9PVY0;A0A1D5RLQ9;Q3UU96 Cdc42bpb;Cdc42bpa Serine/threonine-protein kinase MRCK beta;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha yes no 0 0 0 0 10.5 0.5 1 1 63.156 63.156 2;3 0.00014632 17547 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.18 47.258 0 0 107.12 72.928 83.468 0 0 0 102 74 83 0 0 0 1 1 1 0 10077 8560 2297 8252 19989;19990 23064;23065 23064 2 GYLTEQVNQDLPK Unmodified 1503.7569 0.75692277 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 6 0 1 62.076 62.076 3 0.021752 21151 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.092 17.856 68.974 63.24 75.926 0 0 88.478 65 65 74 0 0 83 1 1 1 0 0 1 6691.5 8561 172 8253 19991 23066 23066 1 GYMDLMPFINK Unmodified 1327.6305 0.63046539 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 11 2 1 1 85.731 85.731 3 0.0033106 29898 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.785 43.527 29.865 0 30.145 0 38.702 0 28 0 28 0 37 0 1 0 1 0 1 0 1882.9 8562 2525 8254 19992;19993 23067;23068 23067 2 GYNVNDEK Deamidation (N) 938.39814 0.39814049 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 1 0 0 5.75 4.21 2 1 1 42.352 42.352 2 4.3336E-09 12617 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.73 97.319 483.63 305.7 511.53 489.46 1063 739.32 455 306 505 494 1062 722 4 3 3 4 4 4 71021 8563 2769 8255 19994;19995;19996;19997 23069;23070;23071;23072 23071 992 4 GYNVNDEK Unmodified 937.41412 0.4141249 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 40.13 40.13 2 1.1625E-06 11232 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 167.33 111.21 910.41 603.55 1207 795.91 1508.5 605.64 858 635 1186 811 1497 585 5 3 5 4 5 2 184810 8564 2769 8255 19998;19999;20000;20001 23073;23074;23075;23076;23077 23074 5 GYPHWPAR Unmodified 982.47733 0.47733428 541;3252;1605 P51859;Q3UMU9;Q9JMG7;Q99JF8;A2BI12;F6RB63 Hdgf;Hdgfrp2;Hdgfrp3;Psip1 Hepatoma-derived growth factor;Hepatoma-derived growth factor-related protein 2;Hepatoma-derived growth factor-related protein 3;PC4 and SFRS1-interacting protein no no 0 0 0 0 10.5 2.5 1 1 41.48 41.48 3 0.0012964 9990 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.09 73.7 79.402 77.694 62.315 75.282 187.11 85.616 74 74 65 74 185 83 1 1 1 1 2 1 30704 8565 1605;3252;541 8256 20002;20003 23078;23079 23078 2 GYPPEDIFNLAGK Unmodified 1419.7034 0.70343063 2825 Q99J77 Nans yes yes 0 0 0 0 8 0 1 78.363 78.363 3 0.020403 27242 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.809 26.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8566 2825 8257 20004 23080 23080 1 GYPTLLWFR Unmodified 1151.6128 0.61276513 216 A0A0R4J1Y7;E9PXX7;Q91W90 Txndc5 Thioredoxin domain-containing protein 5 yes no 0 0 0 0 12 0 1 82.001 82.001 2 0.039405 22782 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.194 30.707 48.978 46.293 24.648 58.885 45.411 0 46 47 28 56 46 0 1 1 1 1 1 0 14373 8567 216 8258 20005 23081 23081 1 GYQPCDPQVIQDR Unmodified 1574.7147 0.71474038 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 4 0 1 48.276 48.276 3 0.00016131 15479 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.622 42.652 0 29.792 0 0 29.288 0 0 28 0 0 28 0 0 1 0 0 1 0 2226.4 8568 893 8259 20006 23082 23082 1 GYQVPAY Unmodified 796.37555 0.37555455 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 0 0 0 0 5 0 1 58.369 58.369 2 0.053254 19916 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.682 63.777 59.587 44.143 46.823 0 56.581 58.081 56 46 46 0 56 56 1 1 1 0 1 1 20987 8569 2638 8260 20007 23083 23083 1 GYSFSLTTFSPSGK Unmodified 1477.7089 0.70890994 1589 P49722 Psma2 Proteasome subunit alpha type-2 yes yes 0 0 0 0 7.75 3.96 1 1 1 1 73.499 73.499 2;3 9.5532E-19 21555 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 134.21 110.41 118.43 83.479 168.66 165.94 116.26 175.69 111 84 158 157 120 166 2 2 2 2 2 2 50296 8570 1589 8261 20008;20009;20010;20011 23084;23085;23086;23087;23088 23088 5 GYSFTTTAER Unmodified 1131.5197 0.51965261 1673;1781 P60710;E9Q1F2;E9Q5F4;G3UZ07;P63260 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 7.93 3.32 1 1 1 2 3 1 1 1 1 1 2 45.076 45.076 2 4.7384E-94 11148 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 196.88 155.43 4952.6 5291.2 5993.5 4933.5 5919.9 6255.1 4663 5372 6028 4931 6074 6018 16 18 14 16 15 16 4004500 8571 1673;1781 8262 20012;20013;20014;20015;20016;20017;20018;20019;20020;20021;20022;20023;20024;20025;20026 23089;23090;23091;23092;23093;23094;23095;23096;23097;23098;23099;23100;23101;23102;23103;23104;23105;23106;23107;23108;23109;23110 23104 22 GYSFVTTAER Unmodified 1129.5404 0.54038805 1791 P68033;P68134;P62737;P63268;D3YZY0;A0A0U1RQ96 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 0 0 10 3 1 1 50.992 50.992 2 1.8455E-11 15111 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 165.98 122.76 48.295 192.99 98.963 123.82 76.812 214.21 46 186 102 120 83 203 1 2 1 1 1 2 22486 8572 1791 8263 20027;20028 23111;23112 23111 2 GYSIPECQK Unmodified 1080.491 0.49099502 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 0 6 0.816 1 1 1 48.645 48.645 2;3 7.1474E-26 13861 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 151.44 118.06 388.14 269.62 0 372.95 394.21 510.03 363 278 0 348 410 489 1 1 0 1 1 1 51026 8573 3011 8264 20029;20030;20031 23113;23114;23115 23115 3 GYSNLLK Unmodified 793.4334 0.43340378 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 9 0 1 54.906 54.906 2 0.027379 15421 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.299 11.956 137.8 166.01 142.99 0 0 238.78 130 167 142 0 0 224 1 1 1 0 0 1 13077 8574 2135 8265 20032 23116 23116 1 GYSTWLK Unmodified 853.4334 0.43340378 1453 P26043;Q7TSG6 Rdx Radixin yes no 0 0 0 0 9.5 0.5 1 1 60.611 60.611 2 0.045499 18160 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.741 41.861 0 213.42 217.66 0 112.15 263.3 0 204 213 0 111 250 0 2 2 0 1 2 14774 8575 1453 8266 20033;20034 23117;23118 23117 2 GYTDHDR Unmodified 862.35694 0.35694438 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 2.5 0.5 1 1 19.272 19.272 3 0.014537 2991 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.268 44.531 29.648 27.967 42.882 16.493 33.261 14.532 28 28 42 18 33 14 2 1 2 2 2 1 3148.8 8576 2054 8267 20035;20036 23119;23120 23119 2 GYTLADEEEDPLIYQHR Unmodified 2047.9487 0.9486993 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 3 0 1 60.434 60.434 3 0.00010088 21476 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.681 48.911 0 29.792 0 0 18.867 29.31 0 28 0 0 19 28 0 1 0 0 1 1 3899.7 8577 3243 8268 20037 23121 23121 1 GYTPIYTPFFMR Unmodified 1491.7221 0.72205759 1460 Q8C483;P26638;A2AFS0 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 12 0 1 81.72 81.72 2 0.00096314 22542 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.379 55.872 30.044 0 0 20.767 0 0 28 0 0 19 0 0 1 0 0 1 0 0 2717.4 8578 1460 8269 20038 23122 23122 1 GYTSWAIGLSVADLAESIMK Unmodified 2111.0609 0.060892282 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 10.6 1.36 1 2 1 1 110.18 110.18 3 1.8619E-22 34142 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.175 77.807 5.2879 6.384 34.957 0 6.8894 23.255 5 6 34 0 7 22 1 1 2 0 1 2 6617.8 8579 1315 8270 20039;20040;20041;20042;20043 23123;23124;23125;23126;23127 23125 5 GYVDDPR Unmodified 820.37153 0.37153181 2466 Q8BVU5;Q91YD4 Nudt9;Trpm2 ADP-ribose pyrophosphatase, mitochondrial;Transient receptor potential cation channel subfamily M member 2 yes no 0 0 0 0 3 0 1 34.79 34.79 2 0.027111 9614 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.591 38.551 0 19.424 47.399 27.099 36.138 38.411 0 19 46 28 37 37 0 1 1 1 1 1 2848.4 8580 2466 8271 20044 23128 23128 1 GYVGVVNR Unmodified 862.4661 0.4661009 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 7.5 0.5 1 1 41.214 41.214 2 0.014113 10558 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.27 64.042 49.026 65.854 0 0 65.675 67.416 46 65 0 0 65 65 1 1 0 0 1 1 5008.5 8581 960 8272 20045;20046 23129;23130 23129 2 GYYAVAVVK Unmodified 968.53312 0.53311783 2797 Q921I1;E9Q035 Tf;Gm20425 Serotransferrin yes no 0 0 0 0 10.5 1.12 1 1 1 1 59.062 59.062 2 1.4167E-08 17462 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 168.38 111.28 89.182 239.43 153.51 146.71 142.61 188.88 84 237 158 144 148 181 2 4 3 2 2 3 31714 8582 2797 8273 20047;20048;20049;20050 23131;23132;23133;23134 23131 4 GYYSLETFTYLLALK Unmodified 1780.9287 0.92873912 134 A0A0N4SVL9;Q9CQR6;A0A0N4SW66 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 11.5 0.5 1 1 101.5 101.5 3 6.2077E-05 28728 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.536 63.49 0 0 47.622 48.275 13.726 9.594 0 0 46 47 14 9 0 0 2 2 1 1 3775.1 8583 134 8274 20051;20052 23135;23136 23136 2 GYYYEIPSIGAIR Unmodified 1500.7613 0.76127986 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 8 0 1 74.127 74.127 3 0.00013594 25163 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.273 51.4 20.149 0 39.932 0 47.137 28.503 19 0 37 0 46 28 1 0 1 0 1 1 5200.8 8584 882 8275 20053 23137 23137 1 HAAENPGK Unmodified 822.39842 0.39841526 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 5 0.816 1 1 1 24.364 24.364 3 0.0055754 4443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.26 47.701 127.59 65.313 140.65 171.26 153.4 213.09 120 65 139 167 157 204 3 1 2 3 2 3 20177 8585 2714 8276 20054;20055;20056 23138;23139;23140 23138 3 HAAGEPAGGEQAPASAESAPER Unmodified 2088.9461 0.94607353 152 Q8CCJ4;A0A0R4J030 Amer2 APC membrane recruitment protein 2 yes no 0 0 0 0 1 0 1 31.157 31.157 3 1.628E-27 7292 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 127.1 108.52 5.2902 9.1385 4.835 0 0 9.594 5 9 5 0 0 9 1 1 1 0 0 1 3766.9 8586 152 8277 20057 23141 23141 1 HAALLGGGQR Unmodified 978.53591 0.5359118 2873 Q99MN9;E9Q1J7;D3YZC1;A0A087WQV1 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 8 0 1 30.509 30.509 3 0.0048669 5235 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.433 45.606 0 39.368 0 0 0 39.442 0 37 0 0 0 37 0 1 0 0 0 1 4491.4 8587 2873 8278 20058 23142 23142 1 HAAPAPSAK Unmodified 848.45045 0.45045083 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.5 0.5 1 1 26.829 26.829 3 0.0027811 4119 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.256 46.301 44.714 45.997 59.588 28.4 0 74.62 42 47 59 28 0 70 1 2 2 1 0 2 5352 8588 1850;2212 8279 20059;20060 23143;23144 23143 2 HACVPVDFEEVHVSSNADEEDIR Unmodified 2653.1715 0.17145838 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 55.901 55.901 4 4.2765E-15 19377 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.12 73.423 29.561 28.858 56.653 46.205 95.156 0 28 28 56 47 93 0 2 1 2 2 2 0 28170 8589 1814 8280 20061;20062 23145;23146 23145 2 HADQEIR Unmodified 867.41988 0.41987898 900 Q9EQK5;E9Q3X0;D3Z2N7 Mvp Major vault protein yes no 0 0 0 0 2 0 1 20.433 20.433 3 0.01081 3333 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.189 42.719 0 14.896 0 0 29.288 0 0 14 0 0 28 0 0 1 0 0 1 0 3892.1 8590 900 8281 20063 23147 23147 1 HAEAVAYYK Unmodified 1050.5134 0.51344502 317 Q8BJU0;A0A1W2P6P1 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 13 0 1 39.34 39.34 3 0.010712 11121 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.982 23.047 108.35 0 184.67 117.15 159.89 0 102 0 176 120 158 0 1 0 1 1 1 0 8815.3 8591 317 8282 20064 23148 23148 1 HAEELER Unmodified 882.41954 0.41954463 440 A2AAN2;Q8BMA6 Srp68 Signal recognition particle subunit SRP68 yes no 0 0 0 0 1.5 0.5 1 1 23.913 23.913 3 0.0052866 4090 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.296 63.402 20.244 37.85 9.1727 29.725 46.751 0 19 37 9 28 46 0 1 2 1 1 1 0 7083.1 8592 440 8283 20065;20066 23149;23150 23149 2 HAEMVHTGLK Unmodified 1121.5652 0.56516301 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 0 0 0 0 8.67 3.09 1 1 1 36.33 36.33 4 0.0022624 9317 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.303 44.571 179.19 0 126.4 194.83 313.33 240.31 167 0 120 185 316 232 1 0 2 2 3 2 19745 8593 1536 8284 20067;20068;20069 23151;23152;23153 23151 3 HAEQERDELADEIANSASGK Unmodified 2168.9934 0.99341766 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 3 0 1 53.526 53.526 4 1.8796E-05 18326 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.529 33.429 49.225 26.473 0 0 55.922 77.288 46 28 0 0 56 74 1 1 0 0 1 1 4634 8594 1974 8285 20070 23154 23154 1 HAEQNGPVDGQGDNPGSQAAEHGADTAVPSDGDK Unmodified 3327.426 0.42604617 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 1.33 0.471 2 1 41.68 41.68 4 3.2756E-28 11400 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.113 74.464 20.167 41.85 24.749 86.638 22.329 50.102 19 41 28 81 22 47 1 2 2 3 1 2 16388 8595 1957 8286 20071;20072;20073 23155;23156;23157 23155 3 HAEQQALR Unmodified 951.48863 0.48862725 683 Q9WVG6;D3YUP1;D6RFA7 Carm1 Histone-arginine methyltransferase CARM1 yes no 0 0 0 0 4 0 1 21.346 21.346 3 0.031686 3329 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.403 32.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8596 683 8287 20074 23158 23158 1 HAGEEPGR Unmodified 851.38858 0.38857886 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 2 0 1 16.181 16.181 3 0.0014717 2585 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.294 48.227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8597 1275 8288 20075 23159 23159 1 HAGGVAEYR Unmodified 958.46208 0.46207815 3157 Q9DCZ1;F6VY18 Gmpr GMP reductase 1 yes no 0 0 0 0 13 0 1 25.576 25.576 3 0.013304 4503 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.278 42.249 0 0 0 60.189 54.18 47.49 0 0 0 56 56 46 0 0 0 1 1 1 2025 8598 3157 8289 20076 23160 23160 1 HAGGVTGGWDNLLAVIPGGSSTPLIPK Unmodified 2613.3915 0.39148597 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 9 0 1 86.792 86.792 4 4.5555E-17 30362 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.579 65.76 0 39.368 0 0 0 29.848 0 37 0 0 0 28 0 1 0 0 0 1 8775.5 8599 680 8290 20077 23161 23161 1 HAGTYDQK Unmodified 918.41954 0.41954463 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 8 3.56 1 1 1 27.592 27.592 3 2.9773E-07 4977 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 166.3 93.507 662.87 612.71 644.87 644.06 498.26 530.51 624 628 654 633 511 511 2 3 2 3 2 2 105780 8600 2291 8291 20078;20079;20080 23162;23163;23164 23163 3 HAHGDQYK Unmodified 954.43078 0.43077802 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 5 0 1 26.146 26.146 3 0.03789 4689 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.082 26.18 0 9.576 0 30.604 0 20.254 0 9 0 28 0 19 0 1 0 1 0 1 1175.1 8601 1618 8292 20081 23165 23165 1 HAIPIIK Unmodified 790.50651 0.50650915 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 10 0.816 1 1 1 47.33 47.33 3 0.018011 10655 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.994 12.468 78.132 80.617 275.01 0 135.98 78.884 74 83 259 0 130 74 1 1 2 0 1 1 16323 8602 2146 8293 20082;20083;20084 23166;23167;23168 23167 3 HALDAHQR Unmodified 946.47331 0.47331154 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 0 7.67 3.86 1 1 1 19.312 19.312 3 0.0021774 2605 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.806 71.787 7.4015 24.886 9.0375 20.023 0 7.462 7 24 9 19 0 7 1 2 1 2 0 1 4162.6 8603 3042 8294 20085;20086;20087 23169;23170;23171;23172 23169 4 HALDFIQHFNEGK Unmodified 1554.7579 0.75792582 2660 Q8R3P0 Aspa Aspartoacylase yes yes 0 0 0 0 8 0 1 61.005 61.005 4 0.017295 19045 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.644 15.926 0 48.944 0 0 0 49.036 0 46 0 0 0 46 0 1 0 0 0 1 4670 8604 2660 8295 20088 23173 23173 1 HALEYSLR Unmodified 987.51378 0.51377937 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 6.5 0.5 1 1 40.669 40.669 3 0.0017376 10164 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.666 64.159 0 39.368 0 0 38.044 19.168 0 37 0 0 37 19 0 1 0 0 1 1 18169 8605 13 8296 20089;20090 23174;23175 23175 2 HALIIYDDLSK Unmodified 1286.6871 0.68705229 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8 2.27 2 2 1 1 1 61.251 61.251 2;3;4 5.4155E-10 21309 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 137.95 101.56 1258.1 794.49 1033.9 1107.6 1383.1 1234.2 1182 810 1028 1085 1405 1183 9 7 8 7 8 6 288700 8606 1881 8297 20091;20092;20093;20094;20095;20096;20097 23176;23177;23178;23179;23180;23181;23182;23183;23184 23184 9 HALLEADVAAHQDR Unmodified 1544.7696 0.76955314 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 39.236 39.236 3;4 1.3265E-07 11005 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.08 93.251 97.939 113.69 133.09 172.89 148.85 125.53 92 111 130 168 148 120 2 2 2 3 2 2 42244 8607 551 8298 20098;20099;20100 23185;23186;23187 23186 3 HALLETALTR Unmodified 1123.635 0.63495714 2450 Q925N0;Q8BRQ9 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 8 0 1 49.268 49.268 3 0.00015593 13513 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.409 69.486 99.329 52.335 32.947 77.352 83.265 0 93 56 37 74 83 0 1 1 1 1 1 0 6592.6 8608 2450 8299 20101 23188 23188 1 HALRGFANALR Unmodified 1224.684 0.68397302 236 A0A140LJG4;A0A140LIS8 yes no 0 0 0 1 12 0 1 23.373 23.373 4 0.0083895 3568 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.683 22.31 0 0 3.1133 2.978 6.1392 0 0 0 3 3 6 0 0 0 1 1 1 0 535.05 8609 236 8300 20102 23189 23189 1 HALSAGYR Unmodified 873.4457 0.4456998 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 6.5 0.5 1 1 28.16 28.16 3 0.0023951 4666 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.308 74.869 48.958 104.47 45.422 57.449 149.57 106.06 46 102 46 56 149 102 1 2 1 1 2 1 10656 8610 3214 8301 20103;20104 23190;23191 23191 2 HAPLVEFEEEESDK Unmodified 1657.7471 0.74714594 2878 Q99MR8 Mccc1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 0 0 0 0 3 0 1 56.992 56.992 3 1.1784E-21 19845 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.3 107.29 0 0 23.608 28.69 26.971 29.078 0 0 23 28 28 28 0 0 1 1 1 1 4422.2 8611 2878 8302 20105 23192 23192 1 HAVALLKPTK Unmodified 1076.6706 0.67061436 2647 Q8R1S0;D3YW66 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial yes no 0 0 0 1 8 4.97 1 1 1 45.671 45.671 4 0.0023068 8535 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.1 60.147 514.78 211.59 585.2 73.274 80.126 96.852 484 222 558 74 83 93 3 2 3 1 1 1 28070 8612 2647 8303 20106;20107;20108 23193;23194;23195 23195 3 HAVDIEEK Unmodified 939.46616 0.46616048 1477 P28661;Q5ND13;Q5ND09;Q5ND18 Sept4 Septin-4 yes no 0 0 0 0 7.33 4.03 1 1 1 38.295 38.295 3 0.00093522 10910 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.37 44.87 250.31 87.61 181.89 56.963 306.09 239.64 241 83 176 56 303 233 2 1 2 1 2 2 26756 8613 1477 8304 20109;20110;20111 23196;23197;23198 23196 3 HAVGNNEFGAVDHER Unmodified 1650.7499 0.74988033 480 A2AJP9;A8Y5Q0;A2AJQ0;Q3UV70 Pdp1 [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial yes no 0 0 0 0 3.5 0.5 1 1 34.082 34.082 4 0.0097526 9360 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.743 30.53 29.952 18.196 0 9.837 0 9.594 28 19 0 9 0 9 1 1 0 1 0 1 2761.1 8614 480 8305 20112;20113 23199;23200 23199 2 HAVLTLLK Unmodified 893.56984 0.56983769 375 A0A2I3BPE9;A0A2I3BRT5;Q7TT21;A0A2I3BPP1;Q3UHB2;Q61037 Tsc2 Tuberin yes no 0 0 0 0 12 0 1 56.071 56.071 3 0.0048732 12634 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.38 44.809 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 3472.3 8615 375 8306 20114 23201 23201 1 HAVSDPSILDSLDLNEDEREVLINNINR Unmodified 3189.5902 0.59019838 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 1 4 0 1 76.744 76.744 4 8.7852E-08 28497 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.061 41.33 9 0 0 19 0 0 9 0 0 19 0 0 1 0 0 1 0 0 1977.2 8616 2269 8307 20115 23202;23203 23202 2 HAVSEGTK Unmodified 827.41373 0.41373097 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 0 7.1 2.81 1 3 2 1 1 1 1 25.703 25.703 2;3 0.00024184 4385 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.54 98.193 792.1 1570.4 757.01 1586.2 2094.6 1635.4 746 1530 820 1515 2104 1596 8 7 8 7 7 11 205940 8617 1349;1350;2541 8308 20116;20117;20118;20119;20120;20121;20122;20123;20124;20125 23204;23205;23206;23207;23208;23209;23210;23211;23212;23213;23214;23215;23216 23213 13 HAVTVSYFYDSTR Unmodified 1544.726 0.72595699 3402 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 0 0 0 0 7 0 1 52.022 52.022 3 0.00037165 15461 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.277 53.289 49.011 0 58.331 45.208 84.741 0 46 0 56 46 83 0 1 0 1 1 1 0 3609.5 8618 3402 8309 20126 23217 23217 1 HAVVNLINYQDDAELATR Unmodified 2041.0229 0.022867292 1878 Q02248;E9Q6A9;D3YUH4 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 6 0 1 61.765 61.765 3 5.1234E-07 20914 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.427 70.683 0 0 30.296 0 38.702 0 0 0 28 0 37 0 0 0 1 0 1 0 7295.9 8619 1878 8310 20127 23218 23218 1 HAVVNLINYQDDAELATR Deamidation (N) 2042.0069 0.006882877 1878 Q02248;E9Q6A9;D3YUH4 Ctnnb1 Catenin beta-1 yes no 0 1 0 0 13 0 1 60.982 60.982 3 0.0014955 21644 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.178 35.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8620 1878 8310 20128 23219 23219 765 1 HAYGDQYR Unmodified 1008.4413 0.44134271 1278 O88844;A0A087WPT4;A0A087WRS9;D3YVY3 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 9 4 1 1 25.392 25.392 3 0.0022109 4431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.114 76.295 30.044 29.792 0 0 57.579 29.041 28 28 0 0 56 28 1 1 0 0 2 1 6199.5 8621 1278 8311 20129;20130 23220;23221 23220 2 HCECAEEGTR Unmodified 1247.4659 0.46591925 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 13 0 1 18.737 18.737 3 0.00055566 2860 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.198 70.535 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 446.49 8622 2264 8312 20131 23222 23222 1 HCILDVSANAVR Unmodified 1353.6823 0.68231804 407 A0A338P6E5;A0A338P6I6;Q62108 Dlg4 Disks large homolog 4 yes no 0 0 0 0 7 0 1 48.387 48.387 3 0.00023009 13712 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.488 43.862 44.91 31.02 0 54.989 40.091 38.298 42 32 0 51 42 37 1 1 0 1 1 1 6868.2 8623 407 8313 20132 23223 23223 1 HCILDVSGNAIK Deamidation (N) 1326.6602 0.66018561 690;767;538 Q52KF7;A2BEE9;P70175;A2BEF2;D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0;D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg3;Dlg2;Dlg1 Disks large homolog 3;Disks large homolog 2;Disks large homolog 1 no no 0 1 0 0 8 0 1 53.67 53.67 3 0.039236 15722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.879 20.662 138.94 108.74 0 0 185.82 223.89 130 111 0 0 185 215 1 1 0 0 1 1 12442 8624 538;690;767 8314 20133 23224 23224 141 1 HCLAFSPK Unmodified 958.46947 0.46947171 2512 Q8CA71 Shisa4 Protein shisa-4 yes yes 0 0 0 0 5 0 1 99.343 99.343 2 0.059514 35879 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.788 28.567 6.3597 15.531 0 9.6683 8.9699 0 6 15 0 9 9 0 1 1 0 1 1 0 2393.2 8625 2512 8315 20134 23225 23225 1 HCSQVDSVR Unmodified 1086.4876 0.48764097 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 3 0 1 22.736 22.736 3 0.012943 4039 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.579 32.792 0 9.576 0 30.269 17.805 19.746 0 9 0 28 19 19 0 1 0 1 1 1 4347.4 8626 2075 8316 20135 23226 23226 1 HDAATCFVDAGNAFK Unmodified 1622.7147 0.71474038 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 6 0.707 1 2 1 58.433 58.433 3;4 2.9213E-05 19428 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.386 53.808 78.86 187.98 212.01 152.13 232.4 95.65 74 185 213 148 232 93 1 3 3 2 3 1 20746 8627 3106 8317 20136;20137;20138;20139 23227;23228;23229;23230 23229 4 HDADGQATLLNLLLR Unmodified 1648.8897 0.88966827 1378 P14685;F7B7L8 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 0 7.5 0.5 1 1 79.373 79.373 3 0.0053945 27614 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.294 36.25 20.149 19.892 59.297 0 9.414 29.848 19 19 56 0 9 28 1 1 2 0 1 1 5266.2 8628 1378 8318 20140;20141 23231;23232 23232 2 HDATASSSTTAAATAR Unmodified 1517.707 0.70701246 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 3.5 0.5 1 1 24.565 24.565 3 1.2791E-05 4524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.279 59.196 19 0 0 5.465 0 5.33 19 0 0 5 0 5 1 0 0 1 0 1 2636 8629 1275 8319 20142;20143 23233;23234 23234 2 HDEAFSTEPLK Unmodified 1272.5986 0.59863121 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;Q60575 Kif1a;Kif1b Kinesin-like protein;Kinesin-like protein KIF1A;Kinesin-like protein KIF1B yes no 0 0 0 0 5 0 1 48.002 48.002 3 0.016485 15021 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.44 23.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8630 24 8320 20144 23235 23235 1 HDEAWMILK Unmodified 1141.559 0.559015 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B no no 0 0 0 0 8.67 3.09 1 1 1 63.139 63.139 3 0.00067111 22277 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.629 32.259 181.48 126.54 228.86 185.05 186.63 227.06 171 130 227 185 194 218 3 2 3 3 3 3 33056 8631 2370 8321 20145;20146;20147 23236;23237;23238 23238 3 HDEYLEVTK Unmodified 1132.5401 0.5400537 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 13 0 1 45.903 45.903 3 0.011918 14286 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.683 27.565 78.785 122.37 0 0 162.78 163.78 74 120 0 0 161 158 1 1 0 0 1 1 6429.3 8632 510 8322 20148 23239 23239 1 HDFSTVLTVFPILR Unmodified 1643.9035 0.90352742 439 A2AAN0;O35250 Exoc7 Exocyst complex component 7 yes no 0 0 0 0 11 0 1 84.503 84.503 3 0.027865 26553 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.337 27.067 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 3595.6 8633 439 8323 20149 23240 23240 1 HDIDSPPASER Unmodified 1222.5578 0.55782903 603 B1AXV0 Frrs1l DOMON domain-containing protein FRRS1L yes yes 0 0 0 0 2 0.816 1 1 1 29.194 29.194 3 0.00044712 6814 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 81.09 68.927 89.773 0 60.291 30.604 67.99 59.696 84 0 56 28 65 56 3 0 2 1 1 2 13019 8634 603 8324 20150;20151;20152 23241;23242;23243 23242 3 HDIIAWVNDIVSLNYTK Unmodified 2000.0367 0.036726442 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 11 0 1 95.437 95.437 3 5.7225E-05 30989 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.809 49.59 26.711 0 19.143 42.579 0 0 25 0 19 40 0 0 2 0 1 2 0 0 4548.3 8635 722 8325 20153 23244;23245 23244 2 HDIIGEFK Unmodified 957.49198 0.4919813 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 6.5 1.12 1 1 1 1 54.899 54.899 3 0.0023783 16850 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.657 55.146 549.23 537.41 651.66 354.48 376.05 720.08 518 547 649 343 380 684 6 5 5 3 4 5 222090 8636 1553 8326 20154;20155;20156;20157 23246;23247;23248;23249;23250;23251 23249 6 HDLDLICR Unmodified 1040.5073 0.50731378 1710;1711;1770 P62137;P62141;A0A0J9YUU8;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 8 3.56 1 1 1 46.881 46.881 3 0.00107 14665 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.26 76.861 207.83 35.056 206.23 36.217 148.9 212.15 195 37 195 37 148 203 3 1 3 1 2 3 45465 8637 1710;1711;1770 8327 20158;20159;20160 23252;23253;23254 23252 3 HDNEETAAAAEGSNVMSTEEATFDR Unmodified 2681.1147 0.11473136 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 1 0 1 57.05 57.05 3 0.0014668 18169 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 34.324 25.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8638 2554 8328 20161 23255 23255 1 HDPVDGR Unmodified 794.36712 0.36711513 2689 Q8VCX5 Micu1 Calcium uptake protein 1, mitochondrial yes yes 0 0 0 0 1 0 1 21.205 21.205 2 0.048867 3280 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.847 33.846 0 9.576 0 6.558 0 0 0 9 0 6 0 0 0 1 0 1 0 0 649.27 8639 2689 8329 20162 23256 23256 1 HDQQPAITR Unmodified 1064.5363 0.53630573 2224 Q6P6I8;E0CYM8;P97797 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 0 8.5 4.5 1 1 24.907 24.907 2;3 0.0043321 4667 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.149 61.322 9.477 0 76.248 0 0 0 9 0 74 0 0 0 1 0 2 0 0 0 9009.2 8640 2224 8330 20163;20164 23257;23258 23257 2 HDSATSFVDAGNAYK Unmodified 1581.7059 0.70594983 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 4.5 0.5 1 1 50.318 50.318 3;4 1.9161E-05 16097 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.589 55.482 148.15 126.25 60.722 135.71 146.67 85.913 139 129 65 130 149 83 2 2 1 2 2 1 11836 8641 1478 8331 20165;20166 23259;23260 23260 2 HDSPEDVK Unmodified 925.41412 0.4141249 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 3 0.816 1 1 1 31.853 31.853 3 0.0013732 8231 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.6 55.896 246.75 344.88 142.05 193.72 259.7 358.23 232 342 148 188 264 343 2 3 1 1 2 3 35073 8642 2092 8332 20167;20168;20169 23261;23262;23263 23262 3 HDVQPEPADGTR Unmodified 1320.6058 0.60584185 1909 Q32NY4 Cnnm3 Metal transporter CNNM3 yes yes 0 0 0 0 1 0 1 26.575 26.575 3 0.00047856 5184 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.393 53.192 20.387 0 0 20.411 18.936 0 19 0 0 19 19 0 1 0 0 1 1 0 2066.7 8643 1909 8333 20170 23264 23264 1 HDVVFLITK Unmodified 1070.6124 0.61243078 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.71 1.67 2 2 1 1 1 63.025 63.025 3;4 0.00039572 22304 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.89 53.378 952.12 568.46 828.21 651.53 853.98 638 893 574 808 639 862 618 7 6 5 6 6 5 303590 8644 2185 8334 20171;20172;20173;20174;20175;20176;20177 23265;23266;23267;23268;23269;23270;23271;23272;23273 23273 9 HEAIETDTAAYEER Unmodified 1633.722 0.72199382 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 1 0 1 39.484 39.484 3 3.2076E-05 11005 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.316 62.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8645 893 8335 20178 23274 23274 1 HEANDYR Unmodified 903.38349 0.38349348 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 4.6 4.32 1 1 1 1 1 18.678 18.678 3 0.00010905 2862 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 159.46 135.48 209.51 187.18 178.46 218.37 232.43 178.24 197 192 183 213 236 171 3 5 3 4 4 3 51420 8646 1304 8336 20179;20180;20181;20182;20183 23275;23276;23277;23278;23279;23280 23276 6 HEANDYRR Unmodified 1059.4846 0.48460451 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 3.5 0.5 1 1 16.431 16.431 3 0.0065473 2413 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.294 41.904 15.953 26.427 9.6664 16.587 26.188 37.629 15 26 10 16 27 36 2 3 1 2 3 3 4646.8 8647 1304 8337 20184;20185 23281;23282;23283 23281 3 HEANNLQLK Unmodified 1065.5567 0.55670682 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 5.5 0.5 1 1 39.222 39.222 3 0.0023463 10287 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.928 31.739 82.773 97.485 72.095 38.316 66.371 81.254 78 98 74 37 65 78 2 2 2 1 1 2 10992 8648 2092 8338 20186;20187 23284;23285 23285 2 HEAPMQMASAQDAR Unmodified 1541.6715 0.67149535 1743 P62823;Q9CXS2 Rab3c Ras-related protein Rab-3C yes no 0 0 0 0 4 0 1 35.761 35.761 3 7.8671E-05 9525 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.022 54.691 0 9.1081 27.989 39.526 18.058 0 0 9 28 38 19 0 0 1 1 1 1 0 2988.4 8649 1743 8339 20188 23286 23286 1 HEASVGGGR Unmodified 868.41513 0.41512796 2850 Q99KX1 Mlf2 Myeloid leukemia factor 2 yes yes 0 0 0 0 4 0 1 16.971 16.971 3 0.00013966 2391 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.33 65.931 9.5632 7.7129 9.227 0 8.368 0 9 8 9 0 8 0 1 1 1 0 1 0 1521.2 8650 2850 8340 20189 23287 23287 1 HEDELLAK Unmodified 953.48181 0.48181054 2696 Q8VDD5;A0A2R8VKI5 Myh9 Myosin-9 yes no 0 0 0 0 4 0 1 44.526 44.526 3 0.016448 13664 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.676 28.867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8651 2696 8341 20190 23288 23288 1 HEDPCAK Unmodified 855.3545 0.35450154 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 4 0 1 26.717 26.717 3 0.038363 5402 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.408 21.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8652 2422 8342 20191 23289 23289 1 HEEAPGHRPTTNPNASK Unmodified 1841.8769 0.87687176 1842 P97315 Csrp1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 1 10 4.24 1 2 26.353 26.353 4;5 0.014178 5914 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.613 21.331 84.589 48.944 29.911 8.0543 58.576 78.884 79 46 28 9 56 74 2 1 1 1 1 1 12291 8653 1842 8343 20192;20193;20194 23290;23291;23292 23290 3 HEEFEEGCK Unmodified 1163.4553 0.45533779 2899 Q9CPV4;E9Q197;F6ZTG3;E9Q055;E9Q2R6;F7BB55 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 2.5 0.5 1 1 36.669 36.669 3 0.00016689 10399 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.74 82.943 89.413 44.17 83.377 173.61 210.34 222.12 84 46 83 167 213 214 2 1 2 3 2 3 13927 8654 2899 8344 20195;20196 23293;23294;23295 23295 3 HEEHERPPFVAYPHLR Unmodified 2012.9969 0.99692731 1545 Q9DCW5;P43024 Cox6a1 Cytochrome c oxidase subunit 6A, mitochondrial;Cytochrome c oxidase subunit 6A1, mitochondrial yes no 0 0 0 1 5 0 1 47.394 47.394 5 5.4931E-06 14788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.191 67.247 0 39.368 0 50.278 0 105.7 0 37 0 46 0 102 0 1 0 1 0 2 6269.4 8655 1545 8345 20197 23296;23297 23296 2 HEGLDVIENAVDNLDSR Unmodified 1894.9021 0.90208345 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 3.5 0.5 1 1 73.036 73.036 3 1.7272E-06 26683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.9 98.034 29.992 0 8.7878 29.543 28.559 29.033 28 0 9 28 28 28 2 0 1 2 1 2 7712 8656 965 8346 20198;20199 23298;23299 23299 2 HEGPSAFLK Unmodified 984.50288 0.50288033 3075 Q9D6M3;E9Q6M6 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 6.5 0.5 1 1 46.87 46.87 3 0.00014274 12942 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.89 66.924 137.39 211.63 279.38 204.49 97.198 282.91 130 212 279 204 102 268 2 3 3 3 2 3 26455 8657 3075 8347 20200;20201 23300;23301;23302 23301 3 HEKEDGAISTIVLR Unmodified 1566.8366 0.83657007 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 1 6 0 1 50.665 50.665 4 0.017846 15684 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.568 29.242 59.692 25.008 45.395 57.825 36.046 0 56 28 46 56 37 0 1 1 1 1 1 0 3784.2 8658 1543 8348 20202 23303 23303 1 HELIEFR Unmodified 942.49232 0.49231565 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 3.56 1 1 1 46.987 46.987 3 0.0017591 14664 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.25 62.538 0 78.141 151.98 161.09 135.32 144.84 0 74 148 158 139 139 0 2 3 4 3 3 121820 8659 2185 8349 20203;20204;20205 23304;23305;23306;23307 23304 4 HELQANCYEEVK Unmodified 1518.6773 0.67729224 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 3.5 0.5 1 1 44.546 44.546 3 2.0746E-08 14140 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.98 88.399 0 78.736 48.591 26.515 63.429 215.65 0 74 46 28 65 204 0 1 1 1 1 2 23093 8660 1410 8350 20206;20207 23308;23309 23308 2 HELQANCYEEVK Deamidation (N) 1519.6613 0.66130782 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 1 0 0 3 0 1 44.699 44.699 4 0.012364 14183 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.675 29.424 59.794 0 49.471 0 46.111 58.38 56 0 46 0 46 56 1 0 1 0 1 1 3450.6 8661 1410 8350 20208 23310 23310 509 1 HELQANCYEEVKDR Unmodified 1789.8053 0.8053463 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 6 4.06 1 2 1 41.164 41.164 3;4 5.9296E-05 11443 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.481 78.772 591.56 230.36 289.36 428.82 705.38 577.24 554 241 287 410 715 555 3 2 2 2 4 2 169780 8662 1410 8351 20209;20210;20211;20212 23311;23312;23313;23314 23314 4 HEMLPEFYK Unmodified 1192.5587 0.55868065 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 13 0 1 57.247 57.247 3 0.054243 19802 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.848 20.236 0 86.117 131.31 93.823 0 168.43 0 83 130 93 0 158 0 1 1 1 0 1 6734.3 8663 2264 8352 20213 23315 23315 1 HEPDPCLEPAPGR Unmodified 1473.6671 0.6670619 778 D3Z5P0;Q5RJI5 Brsk1 Serine/threonine-protein kinase BRSK1 yes no 0 0 0 0 2 0 1 38.322 38.322 3 8.7615E-05 11026 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.324 59.192 29.742 27.324 27.655 19.119 0 0 28 28 28 19 0 0 1 1 1 1 0 0 3268.2 8664 778 8353 20214 23316 23316 1 HEPVGVCGQIIPWNFPLLMQAWK Unmodified 2719.3767 0.37670431 1562 P47738;A0A0G2JEU1;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 96.326 96.326 4 0.0048573 31430 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.421 22.35 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 2292.4 8665 1562 8354 20215 23317 23317 1 HEQILVLDPPSDLK Unmodified 1602.8617 0.86172219 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 0 5 0 2 64.418 64.418 3;4 2.447E-05 22677 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.81 58.97 0 47.679 75.662 53.683 66.397 0 0 46 74 56 65 0 0 1 1 2 1 0 8933.6 8666 3343 8355 20216;20217 23318;23319 23318 2 HEQISDLDR Unmodified 1111.5258 0.52580062 2178 Q64514 Tpp2 Tripeptidyl-peptidase 2 yes yes 0 0 0 0 3 0.816 1 1 1 34.252 34.252 3 0.00056262 9261 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.096 57.827 49.195 29.152 65.709 58.896 35.997 68.036 46 28 65 56 37 65 1 1 2 1 1 2 15056 8667 2178 8356 20218;20219;20220 23320;23321;23322 23321 3 HEQNIDCGGGYVK Unmodified 1475.6463 0.64632646 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 7.33 4.03 1 1 1 39.118 39.118 3 2.3318E-11 10869 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.25 95.267 296.27 383.86 347.18 440.23 482.21 538.43 278 385 351 430 496 518 3 5 4 5 4 4 38308 8668 1375 8357 20221;20222;20223 23323;23324;23325;23326;23327 23326 5 HESCGQCTPCR Unmodified 1390.5176 0.51763725 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 2.5 0.5 1 1 19.697 19.697 3 1.7408E-13 2942 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 143.79 136.01 24.55 14.25 9.6625 5.2985 22.849 28.13 23 14 9 5 23 27 2 1 1 1 2 2 8332.6 8669 680 8358 20224;20225 23328;23329 23329 2 HESQVDSVVK Unmodified 1126.5619 0.56185177 1073 G3X8R0;Q60870 Reep5 Receptor expression-enhancing protein;Receptor expression-enhancing protein 5 yes no 0 0 0 0 4 0 2 37.188 37.188 3;4 1.2331E-05 10184 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.06 87.065 99.346 0 103.9 133.81 110.83 0 93 0 102 130 111 0 1 0 2 2 1 0 14587 8670 1073 8359 20226;20227 23330;23331 23330 2 HEVININLK Unmodified 1078.6135 0.61349341 1176 O09131;D3Z1Q9;Q8K2Q2 Gsto1;Gsto2 Glutathione S-transferase omega-1;Glutathione S-transferase omega-2 yes no 0 0 0 0 7 0 1 53.741 53.741 4 0.062291 16228 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.191 6.5334 20.346 8.2041 0 0 8.727 20.005 19 9 0 0 9 19 1 1 0 0 1 1 2718.4 8671 1176 8360 20228 23332 23332 1 HEWQVNGLDDIKDR Deamidation (N) 1724.8118 0.81181188 1549 P45591 Cfl2 Cofilin-2 yes yes 0 1 0 1 5 0 1 56.353 56.353 4 0.019245 19023 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.14 34.177 29.704 46.647 17.61 0 29.288 0 28 46 19 0 28 0 1 1 1 0 1 0 3066.9 8672 1549 8361 20229 23333 23333 579 1 HEYQANGPEDLNR Deamidation (N) 1542.6699 0.66989867 3301 Q9R0P5 Dstn Destrin yes yes 0 1 0 0 1.83 0.687 2 3 1 36.221 36.221 3 5.5468E-20 10467 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152.32 126.87 137.55 180.53 158.12 110.81 269.35 312.44 129 177 158 111 270 298 3 3 4 3 5 4 87157 8673 3301 8362 20230;20231;20232;20233;20234;20235 23334;23335;23336;23337;23338;23339 23339 1125 6 HEYQANGPEDLNR Unmodified 1541.6859 0.68588309 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 6 4.97 1 1 1 33.918 33.918 3 1.0103E-16 9116 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 142.77 124.19 128.05 73.348 204.76 26.464 190.7 77.019 120 74 195 28 186 74 2 2 4 1 4 1 54385 8674 3301 8362 20236;20237;20238 23340;23341;23342;23343 23340 4 HEYWFAVPQER Unmodified 1460.6837 0.68369824 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 7 0 1 57.303 57.303 3 0.016942 17943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.069 24.519 0 0 0 89.892 43.987 0 0 0 0 83 46 0 0 0 0 1 1 0 6491.7 8675 2028 8363 20239 23344 23344 1 HFALSGK Unmodified 758.40752 0.40752338 196 A0A0R4J124;O54781 Srpk2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 0 0 0 0 10 0 1 42.843 42.843 3 0.016496 8884 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.422 0 0 68.095 63.687 57.412 0 0 0 65 65 56 0 0 0 1 1 1 0 0 3823.6 8676 196 8364 20240 23345 23345 1 HFANNPSPAALTFR Unmodified 1541.7739 0.77391024 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 8.5 0.5 1 1 51.963 51.963 3 9.339E-05 14883 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.279 48.252 118.45 73.407 48.338 27.723 0 49.036 111 74 46 28 0 46 2 1 1 1 0 1 23741 8677 2691;1024 8365 20241;20242 23346;23347 23346 2 HFCPNVPIILVANK Unmodified 1620.881 0.88101784 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 0 10 0.707 1 2 1 69.296 69.296 3;4 7.0064E-06 20183 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.65 71.807 197.45 338.41 154.96 267.38 65.675 393.61 185 333 158 250 65 371 2 4 2 3 1 4 65260 8678 1733 8366 20243;20244;20245;20246 23348;23349;23350;23351 23349 4 HFCPNVPIILVANKK Unmodified 1748.976 0.97598086 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 1 11.5 0.5 1 1 63.971 63.971 4 0.00056814 15612 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.212 49.933 148.45 344.4 376.05 0 302.29 217.46 139 339 359 0 289 204 1 2 1 0 1 1 79834 8679 1733 8367 20247;20248 23352;23353 23353 2 HFCPNVPIILVGNK Unmodified 1606.8654 0.86536778 3254 Q9QUI0;A0A0A6YXF6;Q62159;H3BL56;A0A0G2JEP8 Rhoa;Rhoc Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 0 10.8 1.48 1 1 1 1 68.211 68.211 3;4 8.8942E-05 21836 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.806 48.201 276.68 215.21 203.96 226.67 203.14 96.001 260 223 204 222 204 93 3 3 2 3 2 1 35042 8680 3254 8368 20249;20250;20251;20252 23354;23355;23356;23357 23354 4 HFCPNVPIILVGNKK Unmodified 1734.9603 0.9603308 3254 Q9QUI0;A0A0A6YXF6;Q62159;H3BL56 Rhoa;Rhoc Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 1 11 0 1 62.446 62.446 4 0.005295 16796 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.813 31.527 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 56148 8681 3254 8369 20253 23358 23358 1 HFDADGNGYIEGK Deamidation (N) 1422.6052 0.60517315 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 1 0 0 3.5 0.5 1 1 51.402 51.402 3 0.00024617 16824 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.011 73.433 59.91 114.06 0 89.67 55.796 116.73 56 111 0 83 56 111 1 2 0 2 1 2 17679 8682 1892 8370 20254;20255 23359;23360;23361 23360 777 3 HFDPFTEGIVDGIVANTLSVK Unmodified 2258.1583 0.15829814 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8.5 0.5 1 1 93.161 93.161 3 1.9089E-19 33868 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.831 64.904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8683 3373 8371 20256;20257 23362;23363 23362 2 HFEGLIAR Unmodified 941.5083 0.50830006 2213 Q6P1Y9;Q5PPR2;Q8R3S6 Exoc1 Exocyst complex component 1 yes no 0 0 0 0 7 0 1 46.168 46.168 3 0.011805 12787 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.682 31.344 20.273 0 19.158 29.126 17.858 19.744 19 0 19 28 19 19 1 0 1 1 1 1 2203.4 8684 2213 8372 20258 23364 23364 1 HFEIPDEER Unmodified 1170.5306 0.53055165 2206 Q6NVF0 Ocrl Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 0 3.5 0.5 1 1 46.332 46.332 3 0.0023907 14505 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.643 32.291 0 69.16 0 0 58.576 0 0 65 0 0 56 0 0 2 0 0 2 0 6066.5 8685 2206 8373 20259;20260 23365;23366 23366 2 HFFTVTDPR Unmodified 1118.5509 0.55089316 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 7.5 0.5 1 1 48.834 48.834 3 0.0039974 13206 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.711 31.487 98.782 54.495 123.11 90.789 129.18 76.511 93 56 121 92 130 74 2 1 2 2 2 1 17516 8686 2730 8374 20261;20262 23367;23368 23368 2 HFGAGGNQR Unmodified 942.44201 0.44201141 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 7.5 0.5 1 1 22.7 22.7 3 0.00074866 3296 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.684 57.255 0 0 0 0 15 0 0 0 0 0 15 0 0 0 0 0 1 0 1207 8687 3174 8375 20263;20264 23369;23370 23370 2 HFIDSELECNDVVLFWR Unmodified 2178.0204 0.020424451 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 6 0 1 82.605 82.605 3 0.0088909 30654 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.187 23.502 20.387 0 0 29.528 57.22 0 19 0 0 28 56 0 1 0 0 1 1 0 1604.4 8688 1653 8376 20265 23371 23371 1 HFIEQGINVCLCQSYAK Unmodified 2065.9714 0.97136577 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 7.75 4.15 2 1 2 1 1 1 63.533 63.533 3;4 9.8992E-20 17522 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.58 79.703 178.14 160.8 148.41 234.89 184.93 99.19 167 158 149 222 185 94 4 3 3 4 4 2 48583 8689 1312 8377 20266;20267;20268;20269;20270;20271;20272;20273 23372;23373;23374;23375;23376;23377;23378;23379 23377 8 HFILDECDK Unmodified 1175.5281 0.5281088 3379 Q9Z1N5;G3UXI6 Ddx39b Spliceosome RNA helicase Ddx39b yes no 0 0 0 0 6 0 1 52.472 52.472 3 0.013945 16510 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.013 28.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8690 3379 8378 20274 23380 23380 1 HFIPADYLESTEEFIR Unmodified 1965.9472 0.94724273 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 13 0 1 76.262 76.262 3 0.017241 29050 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 38.376 10.406 38.932 75.014 65.633 0 66.005 57.813 37 74 65 0 65 56 1 1 1 0 1 1 4774.4 8691 353 8379 20275 23381 23381 1 HFISGDEPK Unmodified 1028.4927 0.49270958 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 7.4 2.87 1 2 1 1 41.258 41.258 2;3 8.2298E-05 11628 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.24 85.361 993.94 776.68 907.83 638 1161.8 1227.9 935 805 913 642 1179 1183 5 4 5 3 5 5 162570 8692 1390 8380 20276;20277;20278;20279;20280 23382;23383;23384;23385;23386 23386 5 HFISGDEPKEK Unmodified 1285.6303 0.63026569 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 6 0 1 43.23 43.23 4 0.0068363 12223 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.649 38.367 0 98.952 0 69.173 99.548 115.49 0 93 0 65 102 111 0 1 0 1 1 1 5487.5 8693 1390 8381 20281 23387 23387 1 HFLAPGVR Unmodified 895.50282 0.50282075 3282;1240 O55137;Q9QYR9 Acot1;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 9 0 1 40.442 40.442 3 0.0092683 8997 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.757 35.419 39.155 56.206 44.127 46.587 56.436 0 37 56 46 46 56 0 1 1 1 1 1 0 11270 8694 1240;3282 8382 20282 23388 23388 1 HFLDIIDPR Unmodified 1124.5978 0.59784335 2450 Q925N0;Q8BRQ9;D3YXH5 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 9.33 2.62 1 1 1 64.565 64.565 3 0.006239 23141 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.8 34.628 0 68.558 36.002 103.3 27.961 78.086 0 65 37 102 28 74 0 2 1 2 1 2 16177 8695 2450 8383 20283;20284;20285 23389;23390;23391 23391 3 HFMFLSAEQPYK Unmodified 1496.7122 0.71222118 2869 Q99LY9;B1ARW4 Ndufs5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5;NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed yes no 0 0 0 0 9 0 1 64.056 64.056 4 0.00093295 19864 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.434 38.876 48.978 75.433 0 49.042 65.737 0 46 74 0 46 65 0 1 1 0 1 1 0 4138.2 8696 2869 8384 20286 23392 23392 1 HFPSVNWLISYSK Unmodified 1576.8038 0.80381338 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 11.3 0.471 2 1 74.915 74.915 3;4 1.603E-07 19798 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.92 84.564 249.27 122.35 177.92 87.869 163.15 116.04 237 126 173 86 166 111 4 2 2 1 2 2 46813 8697 1596 8385 20287;20288;20289 23393;23394;23395;23396;23397 23396 5 HFPVGLFSGSK Unmodified 1174.6135 0.61349341 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 62.024 62.024 3 0.00056432 16510 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.143 51.288 235.39 325.56 197.43 108.91 253.23 223.15 222 324 195 102 250 213 3 3 2 1 2 2 21469 8698 2594 8386 20290;20291 23398;23399;23400 23400 3 HFRPELEDR Unmodified 1197.5891 0.58906958 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 1 5 0.816 1 1 1 35.466 35.466 4 0.0017743 9012 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.287 57.433 118.43 52.478 68.563 29.211 121.22 144.71 111 56 65 28 120 139 3 2 1 1 2 3 20006 8699 680 8387 20292;20293;20294 23401;23402;23403;23404 23403 4 HFSGLEEAVYR Unmodified 1306.6306 0.63060004 1543 P42932;H3BL49;H3BKR8 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 5 0 1 51.214 51.214 3 0.00018156 16529 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.306 67.566 49.358 0 0 20.767 0 0 46 0 0 19 0 0 1 0 0 1 0 0 6604.7 8700 1543 8388 20295 23405 23405 1 HFSVEGQLEFR Unmodified 1347.6571 0.65714914 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 6.25 0.433 3 1 56.177 56.177 3 0.0015392 18580 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.864 41.334 49.358 0 0 40.441 0 0 46 0 0 37 0 0 1 0 0 1 0 0 2460.7 8701 1322;1354 8389 20296;20297;20298;20299 23406;23407;23408;23409 23406 4 HFTEFVPLR Unmodified 1144.6029 0.60292873 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 11 0 1 56.26 56.26 3 0.0036194 14031 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.435 33.964 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 8466.3 8702 1596 8390 20300 23410 23410 1 HFVALSTNTAK Unmodified 1187.6299 0.62987176 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 9.5 3.04 1 2 3 3 1 46.115 46.115 2;3;4 1.2986E-33 10211 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 195.36 154.63 1142.8 883.12 1896.4 485.39 828.35 1698 1074 876 1823 481 842 1615 7 6 8 5 5 9 420760 8703 1316 8391 20301;20302;20303;20304;20305;20306;20307;20308;20309;20310 23411;23412;23413;23414;23415;23416;23417;23418;23419;23420 23416 10 HFVGMLPEK Unmodified 1056.5426 0.54263666 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 8.5 0.5 1 1 54.779 54.779 3 0.0072821 15413 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.676 33.29 68.97 119.93 185.35 187.57 190.69 105.39 65 120 186 185 194 102 1 2 2 2 2 1 21697 8704 3301 8392 20311;20312 23421;23422 23422 2 HFYWYLTNEGIQYLR Unmodified 2001.9737 0.97373226 1785 P63325;A0A338P7K4;Q3UW83;A0A338P731 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 11 0 1 77.417 77.417 3 0.0081492 23323 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.568 24.768 39.48 0 66.217 87.865 0 0 37 0 65 84 0 0 1 0 2 2 0 0 5632 8705 1785 8393 20313 23423;23424 23423 2 HGAGAEISTVNPEQYSK Unmodified 1786.8486 0.84859132 2334;1244 O70172;Q80XI4 Pip4k2a;Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 0 5 0.816 1 1 1 48.028 48.028 3;4 3.7438E-06 14352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.54 62.807 59.852 48.944 39.708 107.6 80.542 76.586 56 46 38 102 83 74 2 1 1 3 2 2 11406 8706 1244;2334 8394 20314;20315;20316 23425;23426;23427 23427 3 HGAGDDYFIPSQEFLEAER Unmodified 2179.9811 0.98106206 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 3 0 1 67.927 67.927 3 0.0021298 24903 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.679 27.425 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 2547.6 8707 1817 8395 20317 23428 23428 1 HGAPAAPSPPPR Unmodified 1153.5992 0.59924033 2405 Q8BHL3 Tbc1d10b TBC1 domain family member 10B yes yes 0 0 0 0 5 0 1 28.851 28.851 3 0.0030696 5871 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.693 33.45 9.657 0 0 20.767 0 20.254 9 0 0 19 0 19 1 0 0 1 0 1 879.82 8708 2405 8396 20318 23429 23429 1 HGDATDVR Unmodified 869.39914 0.39914354 1509 P34152;A0A2I3BQ85 Ptk2 Focal adhesion kinase 1 yes no 0 0 0 0 1.5 0.5 1 1 18.614 18.614 3 0.0050255 2842 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.92 37.362 0 6.384 14.505 14.438 9.414 0 0 6 14 14 9 0 0 1 1 1 1 0 3460.2 8709 1509 8397 20319;20320 23430;23431 23431 2 HGDPGDAAQQEAK Unmodified 1322.5851 0.58510641 1645 P56812 Pdcd5 Programmed cell death protein 5 yes yes 0 0 0 0 8 5 1 1 30.238 30.238 3 7.6439E-05 6549 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.492 62.125 69.135 63.687 48.511 29.921 75.04 28.811 65 65 47 28 74 28 2 2 1 1 2 1 12469 8710 1645 8398 20321;20322 23432;23433 23433 2 HGEAQVK Unmodified 767.3926 0.3926016 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 13 0 1 25.107 25.107 3 0.0082789 4235 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.616 54.28 0 97.656 77.523 144.21 164.81 94.435 0 93 83 139 167 93 0 1 1 1 1 1 46816 8711 3126 8399 20323 23434 23434 1 HGECAQTIR Unmodified 1070.4927 0.49272635 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 3 0 1 21.649 21.649 3 0.023189 3651 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.091 33.422 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1748.2 8712 1466 8400 20324 23435 23435 1 HGEEPLPSEEEHCSVVEVTEEEVK Unmodified 2777.2338 0.23378386 2679 Q8VBY2 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 0 1 0 2 54.805 54.805 4;5 1.1116E-16 17050 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.55 81.936 79.562 72.904 91.588 95.696 26.276 38.692 75 75 93 93 28 37 2 2 2 2 1 1 8800.7 8713 2679 8401 20325;20326 23436;23437 23437 2 HGEIDYEAIVK Unmodified 1272.635 0.63501672 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 4.67 0.471 1 2 54.764 54.764 3;4 0.00045694 18199 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.763 55.104 138.42 89.925 102.85 35.362 92.311 97.34 130 93 102 37 93 93 3 2 2 1 3 2 8420.4 8714 1726 8402 20327;20328;20329 23438;23439;23440 23439 3 HGESAWNLENR Unmodified 1311.5956 0.59561152 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 38.717 38.717 3 5.7541E-17 11104 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 166.69 108.52 208.26 63.7 249.45 148.98 236.63 289.6 195 65 241 148 240 278 3 2 4 2 4 5 137680 8715 3126 8403 20330;20331;20332;20333 23441;23442;23443;23444;23445;23446 23441 6 HGFDVCAK Unmodified 932.41744 0.41743614 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 6 0 1 41.968 41.968 3 0.01756 11565 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.014 34.269 59.369 43.537 83.981 65.406 33.68 58.735 56 46 83 65 37 56 1 1 1 1 1 1 6768.2 8716 2727 8404 20334 23447 23447 1 HGFFVNPSDSVAVIAANIFSIPYFQQTGVR Unmodified 3280.6669 0.66693255 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 12 0 1 105.01 105.01 5 0.0012919 29247 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.55 28.974 0 0 0 3.1637 6.1307 0 0 0 0 3 6 0 0 0 0 1 1 0 500.6 8717 3022 8405 20335 23448 23448 1 HGGEDYVFSLLTGYCEPPTGVSLR Unmodified 2653.2483 0.24825214 3030 Q9D0M3 Cyc1 Cytochrome c1, heme protein, mitochondrial yes yes 0 0 0 0 8 0 1 83.44 83.44 3 4.6354E-06 29668 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.577 41.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8718 3030 8406 20336 23449 23449 1 HGGPADEER Unmodified 966.41552 0.41552189 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 13 0 1 18.015 18.015 3 0.0017209 2817 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.943 59.557 0 3.192 0 0 3.138 0 0 3 0 0 3 0 0 1 0 0 1 0 1029.8 8719 1326 8407 20337 23450 23450 1 HGGTIPVVPTAEFQDR Unmodified 1722.8689 0.86893283 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 7.4 2.87 1 2 1 1 53.892 53.892 3;4 9.418E-12 17861 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.54 98.973 216.83 355.66 375.05 359.4 504.4 365.38 204 352 380 351 510 352 3 4 4 4 5 3 154710 8720 1458 8408 20338;20339;20340;20341;20342 23451;23452;23453;23454;23455 23455 5 HGGYQPSDEHK Unmodified 1253.5425 0.54251332 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 5.86 3.14 1 2 2 1 1 26.86 26.86 3;4 5.5161E-09 5524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.81 93.397 316.56 748.24 892.83 867.51 1274.9 949.67 296 730 895 859 1287 915 5 7 7 7 9 6 92595 8721 1883 8409 20343;20344;20345;20346;20347;20348;20349 23456;23457;23458;23459;23460;23461;23462;23463;23464;23465 23457 10 HGGYQPSDEHKTDLNPDNLQGGDDLDPNYVLSSR Unmodified 3752.6939 0.69388818 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 4 0.816 1 1 1 60.488 60.488 5 2.954E-10 21305 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.891 49.67 102.37 0 106.8 74 37.714 72.478 96 0 99 74 37 69 3 0 2 1 1 3 32903 8722 1883 8410 20350;20351;20352 23466;23467;23468;23469 23468 4 HGIVEDWDLMER Unmodified 1498.6875 0.68746299 2836;2170 Q641P0;Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WP86;A0A087WS98 Actr3b;Actr3 Actin-related protein 3B;Actin-related protein 3 no no 0 0 0 0 6.25 3.96 1 1 1 1 63.788 63.788 3 3.655E-08 22409 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.09 80.65 90.091 28.42 0 50.278 0 78.884 84 28 0 46 0 74 2 2 0 1 0 2 20081 8723 2170;2836 8411 20353;20354;20355;20356 23470;23471;23472;23473 23472 4 HGKPISSSYVK Unmodified 1201.6455 0.64552182 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 1 9 0 1 38.145 38.145 4 0.010417 8098 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.979 22.29 376.07 321.51 0 359.6 0 411.48 352 326 0 329 0 386 1 1 0 1 0 1 22781 8724 1357 8412 20357 23474 23474 1 HGLDVSACEVFR Unmodified 1388.6507 0.65068356 2393 Q8BH44;G3UWZ2 Coro2b Coronin-2B yes no 0 0 0 0 5 0 1 53.725 53.725 3 0.021421 17741 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.28 17.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8725 2393 8413 20358 23475 23475 1 HGLEVIYMIEPIDEYCVQQLK Unmodified 2576.2655 0.2654821 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 6 0 1 85.204 85.204 4 0.043114 31783 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 28.748 15.121 39.468 46.283 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 0 1888 8726 1322 8414 20359 23476 23476 1 HGLLPSETIAVVEHIK Unmodified 1741.9727 0.97266962 251 A0A1B0GRP7;Q9Z2Y8;A0A1B0GSP5 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 7 0 1 67.685 67.685 4 0.013554 22859 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.143 17.586 69.084 43.037 74.67 55.393 72.551 67.22 65 46 74 56 74 65 1 1 1 1 1 1 3634.3 8727 251 8415 20360 23477 23477 1 HGNIEER Unmodified 853.40423 0.40422892 639 F7CYX4;B8QI34;Q8BSS9;B2RXW8;B2RXQ2 Ppfia2;Ppfia1 Liprin-alpha-2 yes no 0 0 0 0 2 0 1 18.196 18.196 3 0.010251 2778 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.282 45.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8728 639 8416 20361 23478 23478 1 HGPICQK Unmodified 838.41196 0.41195684 2417 Q8BJH1 Zc2hc1a Zinc finger C2HC domain-containing protein 1A yes yes 0 0 0 0 6 0 1 30.374 30.374 3 0.036402 6197 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.525 8.0994 59.368 54.328 74.969 34.577 74.204 46.919 56 56 74 37 74 46 1 1 1 1 1 1 4281.7 8729 2417 8417 20362 23479 23479 1 HGPLDTSVEDPQLR Unmodified 1562.7689 0.76888444 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 3 0 1 48.066 48.066 3 0.0088468 15772 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.316 28.685 29.744 27.331 27.215 28.982 0 39.442 28 28 28 28 0 37 1 1 1 1 0 1 4054.5 8730 1980 8418 20363 23480 23480 1 HGQPTPGK Unmodified 820.41915 0.4191507 2248 Q6PGL7;A0A0N4SV74;A0A0N4SUJ0 Fam21 WASH complex subunit FAM21 yes no 0 0 0 0 6 0 1 25.433 25.433 3 0.055415 4201 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.109 10.737 24.537 28.137 0 20.252 27.359 29.067 23 28 0 19 28 28 1 1 0 1 1 1 1066.1 8731 2248 8419 20364 23481 23481 1 HGSIIYHPSLLPR Unmodified 1488.8201 0.82013215 2633 Q8R0Y6;A0A0N4SW56;D3Z6B9;Q8K009;A0A0N4SVT2 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 9 0 1 47.531 47.531 4 7.0142E-05 11958 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.469 66.563 39.256 35.979 44.368 68.401 0 0 37 37 46 65 0 0 1 1 1 1 0 0 6116.5 8732 2633 8420 20365 23482 23482 1 HGSLGFLPR Unmodified 982.53485 0.53484916 1467 P27659;A0A087WNS0;A0A087WQK0 Rpl3 60S ribosomal protein L3 yes no 0 0 0 0 8.5 0.5 1 1 46.822 46.822 3 0.0088081 11579 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.032 28.859 89.036 81.763 114.85 0 157.93 183.11 84 83 111 0 157 176 2 1 1 0 2 2 15284 8733 1467 8421 20366;20367 23483;23484 23484 2 HGSVALYDIR Unmodified 1129.588 0.58800695 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 6 0 1 44.694 44.694 3 0.0018679 12867 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.334 49.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8734 2790 8422 20368 23485 23485 1 HGVFLVR Unmodified 826.48136 0.48135703 2166 Q64010;Q5ND50;Q3TQV3 Crk Adapter molecule crk no no 0 0 0 0 10.7 1.7 1 1 1 41.6 41.6 3 0.0024203 9504 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.06 84.699 112.98 51.242 84.289 47.631 84.212 175.62 106 51 83 46 84 167 3 1 2 1 2 3 22939 8735 2166 8423 20369;20370;20371 23486;23487;23488 23486 3 HGVYNPNK Unmodified 927.45626 0.45626449 1327 P08249;A0A0G2JF23;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 9.1 2.21 1 2 2 1 1 1 1 1 31.392 31.392 2;3 0.0019336 7079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.139 65.343 1690.9 1381.6 1857.6 1256.6 1764.1 582.6 1592 1428 1850 1275 1755 561 8 9 8 7 8 7 395420 8736 1327 8424 20372;20373;20374;20375;20376;20377;20378;20379;20380;20381 23489;23490;23491;23492;23493;23494;23495;23496;23497;23498 23498 10 HGVYNPNKIFGVTTLDIVR Unmodified 2142.1586 0.15857291 1327 P08249;A0A0G2JF23;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 1 11 0 1 67.747 67.747 4 1.532E-07 18987 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.281 84.085 120 0 0 0 0 0 120 0 0 0 0 0 1 0 0 0 0 0 13931 8737 1327 8425 20382 23499 23499 1 HGYPLILYDVFPDVCK Unmodified 1934.9601 0.96005603 2852 Q99L13 Hibadh 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 8 0 1 83.337 83.337 4 0.0026034 29643 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.3 29.019 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 1358.8 8738 2852 8426 20383 23500 23500 1 HHAAYVNNLNATEEK Deamidation (N) 1710.7962 0.79616182 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 1 0 0 8.5 4.5 2 2 38.741 38.741 4 0.00072002 11909 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.805 47.441 274.97 156.95 0 98.29 178.59 192.98 257 158 0 93 176 182 4 3 0 3 3 3 22801 8739 1336 8427 20384;20385;20386;20387 23501;23502;23503;23504;23505 23502 411;412;413 5 HHAAYVNNLNATEEK Unmodified 1709.8121 0.81214624 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 37.168 37.168 4 4.9063E-17 10292 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.31 103.75 445.62 394.14 470.36 388.23 414.95 635.22 419 400 469 385 433 607 4 4 4 4 4 5 48865 8740 1336 8427 20388;20389;20390;20391 23506;23507;23508;23509;23510 23506 5 HHAISAK Unmodified 762.41367 0.41367139 1523 P35564 Canx Calnexin yes yes 0 0 0 0 8 0.816 1 1 1 25.187 25.187 3 0.018012 3556 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.993 37.844 63.687 60.584 65.201 18.013 76.577 5.33 60 62 64 19 74 5 3 3 2 1 2 1 4080.1 8741 1523 8428 20392;20393;20394 23511;23512;23513 23513 3 HHCPNTPIILVGTK Unmodified 1585.8399 0.83988131 1759 Q3TLP8;P63001 Rac1 Ras-related C3 botulinum toxin substrate 1 yes no 0 0 0 0 9 0 1 47.1 47.1 3 0.0076954 11800 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.807 29.42 0 0 0 50.278 0 49.036 0 0 0 46 0 46 0 0 0 1 0 1 5616.9 8742 1759 8429 20395 23514 23514 1 HHEASSHADISR Unmodified 1345.6123 0.61232422 660 CON__P20930 yes yes 0 0 0 0 1 0 1 39.518 39.518 3 0.0013088 11107 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.418 20.402 63.489 72.985 87.909 58.532 96.158 76.14 60 74 88 60 97 74 1 1 1 1 1 1 38493 + 8743 660 8430 20396 23515 23515 1 HHGPQTLYLPVTLSSIPVFQR Unmodified 2389.2906 0.29064972 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 11 0 1 73.569 73.569 4 0.0024891 21588 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.136 14.988 29.257 56.195 84.71 35.392 0 88.478 28 56 83 37 0 83 1 1 1 1 0 1 4634.2 8744 2408 8431 20397 23516 23516 1 HHLDGETEEER Unmodified 1350.58 0.58002103 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 13 0 1 22.642 22.642 4 0.014271 3456 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.64 26.434 0 29.478 18.789 0 19.874 0 0 28 19 0 19 0 0 1 1 0 1 0 540.86 8745 1347 8432 20398 23517 23517 1 HHLEALQSSK Unmodified 1148.5938 0.5938206 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 9 2.35 1 2 1 34.041 34.041 3;4 0.0018972 7467 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.347 29.403 137.3 440.49 273.75 375.94 181.45 431.88 130 427 273 362 185 410 1 4 2 5 1 4 18083 8746 90 8433 20399;20400;20401;20402 23518;23519;23520;23521;23522 23518 5 HHVLHDQNVDKR Unmodified 1496.7597 0.75965715 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 1 13 0 1 27.747 27.747 5 0.0012408 5565 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.532 32.677 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 1793.1 8747 2074 8434 20403 23523 23523 1 HHYESLQTAK Unmodified 1212.5887 0.58873523 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 6.5 0.5 1 1 32.81 32.81 4 0.00021147 7336 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.062 72.301 216.81 128.01 242.25 0 202.92 0 204 130 232 0 194 0 2 1 2 0 2 0 7986 8748 1157;2210 8435 20404;20405 23524;23525 23524 2 HIADLAGNPEVILPVPAFNVINGGSHAGNK Deamidation (N) 3021.5672 0.56721851 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 1 0 0 7.64 1.3 3 2 3 2 1 80.055 80.055 3;4;5 1.4637E-37 28653 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.24 105.04 838.24 673.03 986.47 718.95 882.89 854.45 788 686 973 704 889 815 10 11 12 10 11 11 362920 8749 1398 8436 20406;20407;20408;20409;20410;20411;20412;20413;20414;20415;20416 23526;23527;23528;23529;23530;23531;23532;23533;23534;23535;23536;23537;23538;23539;23540;23541 23531 483 16 HIADLAGNPEVILPVPAFNVINGGSHAGNK Unmodified 3020.5832 0.58320292 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 10.5 2.5 1 1 78.844 78.844 4;5 1.7729E-12 30404 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.323 48.74 109.45 118.1 0 69.687 188.33 117.33 102 111 0 65 185 112 1 2 0 1 2 2 44896 8750 1398 8436 20417;20418 23542;23543;23544 23543 3 HIAEDADR Unmodified 925.42536 0.42535829 905;1106;1107;1656;906 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 4.6 4.32 1 1 1 1 1 24.398 24.398 2;3 0.00025635 4298 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.58 61.561 91.818 74.283 148.37 96.149 171.44 97.945 86 74 139 91 168 93 3 2 2 3 4 2 142140 8751 905;906;1106;1107;1656 8437 20419;20420;20421;20422;20423 23545;23546;23547;23548;23549;23550;23551 23545 7 HIAEDSDR Unmodified 941.42027 0.42027292 471 A2AIM4;CON__Q3SX28;P58774 Tpm2 Tropomyosin beta chain yes no 0 0 0 0 2 0 1 22.018 22.018 3 0.00011433 3801 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 118.06 73.292 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 8752 471 8438 20424 23552 23552 1 HIAEEADR Unmodified 939.44101 0.44100836 782;926;757;209 P21107;A0A0R4J1P2;D3YVR0;D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3;Tpm3-rs7 Tropomyosin alpha-3 chain no no 0 0 0 0 4 4.08 1 2 2 1 25.417 25.417 2;3 0.00014312 5234 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 149.65 102.59 173.77 279.08 141.02 94.833 367.09 267.48 163 269 135 89 362 259 6 5 4 3 5 5 206660 8753 209;757;782;926 8439 20425;20426;20427;20428;20429;20430 23553;23554;23555;23556;23557;23558;23559;23560 23556 8 HIAEVSQEVTR Unmodified 1267.6521 0.65206377 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 6.14 3.04 1 1 2 1 1 1 38.177 38.177 2;3 4.9216E-15 10760 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 159.94 116.85 107.84 83.821 252.79 215.28 189.6 284.23 101 84 242 206 195 270 3 2 5 6 6 6 232270 8754 1160 8440 20431;20432;20433;20434;20435;20436;20437 23561;23562;23563;23564;23565;23566;23567;23568 23562 8 HIAQLAGNSDLILPVPAFNVINGGSHAGNK Deamidation (N) 3024.5781 0.57811755 1399 P17183;A0A0N4SUX5;D3Z2S4 Eno2 Gamma-enolase;Enolase yes no 0 1 0 0 9.36 1.97 2 2 3 2 2 78.599 78.599 3;4;5 1.9974E-35 26757 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.92 104.18 563.55 539.24 338.19 480.99 693.46 382.95 529 538 334 463 695 371 9 10 5 7 9 5 308140 8755 1399 8441 20438;20439;20440;20441;20442;20443;20444;20445;20446;20447;20448 23569;23570;23571;23572;23573;23574;23575;23576;23577;23578;23579;23580 23574 490;491;492;493 12 HIAQLAGNSDLILPVPAFNVINGGSHAGNK 2 Deamidation (N) 3025.5621 0.56213313 1399 P17183;A0A0N4SUX5;D3Z2S4 Eno2 Gamma-enolase;Enolase yes no 0 2 0 0 8 0 1 81.054 81.054 5 1.1846E-12 28400 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.732 43.484 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 5288.7 8756 1399 8441 20449 23581 23581 490;491;492;493 1 HIAQLAGNSDLILPVPAFNVINGGSHAGNK Unmodified 3023.5941 0.59410196 1399 P17183;A0A0N4SUX5;D3Z2S4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 10 0 2 76.639 76.639 4;5 9.1481E-32 23405 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.006 84.919 98.704 46.644 142.88 94.824 92.922 0 93 46 139 93 93 0 2 1 2 1 1 0 12869 8757 1399 8441 20450;20451 23582;23583 23583 2 HIDCAQVYQNEK Unmodified 1503.6776 0.67762659 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 6 0 1 42.49 42.49 3 0.00058425 11881 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.65 49.263 39.184 35.779 56.652 35.817 66.345 0 37 37 56 37 65 0 1 1 1 1 1 0 3384.3 8758 1548 8442 20452 23584 23584 1 HIDCASVYGNETEIGEALK Unmodified 2104.9735 0.97353384 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 4 0 1 62.433 62.433 3 1.6599E-15 22114 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.374 72.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8759 3214 8443 20453 23585 23585 1 HIDGSLNQWAVTFADK Unmodified 1800.8795 0.87949752 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 72.302 72.302 4 0.0012108 24398 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.608 31.776 39.265 45.72 34.458 59.154 0 29.848 37 46 37 56 0 28 1 1 1 1 0 1 2042.3 8760 570 8444 20454 23586 23586 1 HIDLVEGDEGR Unmodified 1238.5891 0.58912916 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 5.4 3.93 1 1 1 1 1 43.632 43.632 2;3 1.4665E-13 13265 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 145.41 91.723 1157.2 598.51 1032.9 940.17 784.22 1033.6 1087 614 1017 929 788 985 6 4 3 4 5 4 229670 8761 1055 8445 20455;20456;20457;20458;20459 23587;23588;23589;23590;23591;23592 23590 6 HIEEGLGR Unmodified 909.46683 0.46682918 2314 Q80U63 Mfn2 Mitofusin-2 yes yes 0 0 0 0 3.5 0.5 1 1 33.435 33.435 3 0.0043172 8382 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.058 14.343 29.807 0 39.884 0 56.581 58.081 28 0 37 0 56 56 1 0 1 0 2 2 6053.9 8762 2314 8446 20460;20461 23593;23594 23594 2 HIFALFNTEQR Deamidation (N) 1375.6884 0.68844927 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 1 0 0 9 0 1 64.606 64.606 3 8.4651E-05 20085 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.507 61.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8763 118;1534 8447 20462 23595 23595 54 1 HIFALFNTEQR Unmodified 1374.7044 0.70443369 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 11.5 1.12 1 1 1 1 61.663 61.663 2;3 9.4794E-21 16322 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 173.24 128.89 633.76 1007 1390 1272.7 1673.9 1020.4 597 995 1386 1269 1675 984 4 3 4 7 4 6 814150 8764 118;1534 8447 20463;20464;20465;20466 23596;23597;23598;23599;23600;23601;23602;23603 23599 8 HIGLVYSGMGPDYR Unmodified 1563.7504 0.7503976 1589 P49722;Q8BKE0 Psma2 Proteasome subunit alpha type-2 yes no 0 0 0 0 8 0 1 55.867 55.867 3 0.0021871 16620 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.939 40.207 79.279 24.446 0 0 0 0 74 28 0 0 0 0 1 1 0 0 0 0 4396.2 8765 1589 8448 20467 23604 23604 1 HIGYDDSSK Unmodified 1020.4512 0.45123869 225 A0A0U1RNT6;A0A0U1RNK6;Q3THS6;A0A0U1RQ95 Mat2a S-adenosylmethionine synthase isoform type-2 yes no 0 0 0 0 5.5 0.5 1 1 37.234 37.234 3 0.000559 9850 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.178 73.401 0 48.367 83.331 104.49 108.01 96.056 0 46 84 102 111 93 0 1 2 2 2 2 6229.5 8766 225 8449 20468;20469 23605;23606 23605 2 HIIEGLK Unmodified 808.48069 0.48068833 802 Q3UPV6;E0CXZ9;P62482;P63143 Kcnab2;Kcnab1 Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1 yes no 0 0 0 0 8 0 1 47.9 47.9 3 0.0052802 12884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.942 44.495 79.402 0 0 0 67.99 0 74 0 0 0 65 0 1 0 0 0 1 0 5586 8767 802 8450 20470 23607 23607 1 HIITTTR Unmodified 840.48175 0.48175096 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 13 0 1 28.39 28.39 3 0.058304 5840 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.426 27.695 0 48.16 46.882 0 56.948 47.411 0 46 46 0 56 46 0 1 1 0 1 1 3805.1 8768 255;3362 8451 20471 23608 23608 1 HILELASILDVR Unmodified 1377.798 0.79799972 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 10 0.816 1 1 1 78.141 78.141 3 0.00021063 23618 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.435 61.272 20.244 57.235 58.864 9.837 0 29.848 19 56 56 9 0 28 1 2 1 1 0 1 16358 8769 2511 8452 20472;20473;20474 23609;23610;23611 23611 3 HILLAVANDEELNQLLK Unmodified 1932.068 0.068026571 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 no no 0 0 0 0 9 0 1 79.609 79.609 3 0.015472 27189 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.092 9.1225 0 0 0 0 46.477 47.71 0 0 0 0 46 46 0 0 0 0 1 1 3452.1 8770 3296 8453 20475 23612 23612 1 HILNFYR Unmodified 961.51339 0.51338544 3365 Q9Z0V2 Kcnd2 Potassium voltage-gated channel subfamily D member 2 yes yes 0 0 0 0 11 0.816 1 1 1 49.103 49.103 3 0.022552 11144 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.715 38.56 29.742 41.681 59.915 52.842 22.509 111 28 42 60 52 23 111 1 2 2 2 1 1 19188 8771 3365 8454 20476;20477;20478 23613;23614;23615 23614 3 HIMSTTNVR Unmodified 1057.5339 0.53386288 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 0 9.33 1.25 1 1 1 31.536 31.536 3 0.00029459 5439 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.177 62.059 30.044 48.323 37.135 40.441 0 39.442 28 46 37 37 0 37 1 1 1 1 0 1 11251 8772 1944 8455 20479;20480;20481 23616;23617;23618 23617 3 HINNCAR Unmodified 883.40827 0.40826844 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 0 6 0.816 1 1 1 18.071 18.071 3 0.0053172 2543 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.986 62.473 11.731 4.9883 7.7993 11.428 11.129 11.528 11 5 8 11 11 11 3 1 2 2 2 2 2946.7 8773 1234 8456 20482;20483;20484 23619;23620;23621 23619 3 HIPGAAFFDIDR Unmodified 1357.6779 0.67788459 2826 Q99J99;A0A2R8VHT1 Mpst 3-mercaptopyruvate sulfurtransferase yes no 0 0 0 0 10 3 1 1 65.854 65.854 3 4.8113E-05 22146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.021 64.701 49.07 0 78.641 26.485 65.813 57.818 46 0 74 28 65 56 1 0 2 1 1 2 10021 8774 2826 8457 20485;20486 23622;23623 23622 2 HISPSAK Unmodified 738.40244 0.40243801 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 7 0 1 30.772 30.772 3 0.039815 5711 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.636 30.866 78.846 32.957 65.473 55.721 84.258 0 74 37 65 56 83 0 1 1 1 1 1 0 2486.7 8775 415 8458 20487 23624 23624 1 HISPSAKPFENGQYLDIYGITR Deamidation (N) 2506.2492 0.24923841 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 1 0 1 8 0 1 68.663 68.663 4 2.6557E-09 22665 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.864 51.968 137.67 65.854 69.883 49.072 130.49 94.349 129 65 65 46 130 92 2 1 1 1 2 2 6235.5 8776 415 8459 20488 23625;23626 23625 110 2 HITDEADR Unmodified 955.43592 0.43592298 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 2.5 0.5 1 1 25.879 25.879 3 0.0099143 5295 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.419 47.216 50.193 0 40.021 18.902 37.175 49.041 47 0 38 19 37 47 2 0 2 1 1 2 5672.4 8777 2196 8460 20489;20490 23627;23628 23627 2 HIVEDTEEAR Unmodified 1197.5626 0.56258006 554 A6H5Y3 Mtr Methionine synthase yes yes 0 0 0 0 2 0 1 33.024 33.024 3 0.0070065 8491 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.149 38.369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8778 554 8461 20491 23629 23629 1 HIVLSGGSTMYPGLPSR Unmodified 1770.9087 0.90868916 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 12 0 1 58.048 58.048 3 4.0915E-06 13371 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.446 62.389 0 19.892 19.365 0 19.197 19.706 0 19 19 0 19 19 0 1 1 0 1 1 3412.1 8779 1690 8462 20492 23630 23630 1 HIWYIGGK Unmodified 972.51814 0.51813647 1061 G3UXM5;G3UWV4;Q69Z98;G3UZ19;G3UYN4 Brsk2 Serine/threonine-protein kinase BRSK2 yes no 0 0 0 0 11 0 1 54.773 54.773 3 0.015998 13453 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.281 27.471 0 93 0 0 0 0 0 93 0 0 0 0 0 1 0 0 0 0 8463.9 8780 1061 8463 20493 23631 23631 1 HIYFITGETK Unmodified 1207.6237 0.62372375 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10 1.91 2 1 1 1 1 55.193 55.193 3;4 4.6778E-09 18504 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 144.65 94.358 1426.2 1327.1 1685 1919 2081.3 1985.2 1344 1348 1705 1877 2125 1918 6 6 6 6 5 6 306760 8781 1322 8464 20494;20495;20496;20497;20498;20499 23632;23633;23634;23635;23636;23637;23638;23639 23639 8 HIYLLPSGR Unmodified 1054.5924 0.59236404 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 11 1.41 1 1 1 1 1 49.573 49.573 3 1.2828E-06 11652 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 155.07 105.72 332.45 111.91 552 561.74 552.91 235.67 315 116 547 548 561 227 3 1 4 4 4 2 408190 8782 1311 8465 20500;20501;20502;20503;20504 23640;23641;23642;23643;23644;23645 23642 6 HKDAFLK Unmodified 857.47594 0.4759373 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 1 9 0 1 42.221 42.221 4 0.054196 9707 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.383 10.745 0 178.08 358.56 212.27 188.5 257.92 0 173 350 217 198 247 0 1 1 1 1 1 11392 8783 3049 8466 20505 23646 23646 1 HKDIDILIVR Unmodified 1220.7241 0.7241065 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 1 9 0 1 54.122 54.122 4 0.011761 15092 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.784 39.154 0 0 0 0 56.581 58.081 0 0 0 0 56 56 0 0 0 0 1 1 4534.1 8784 1814 8467 20506 23647 23647 1 HKPGFLDLK Unmodified 1053.5971 0.59711507 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 1 9 0 1 52.906 52.906 4 0.036623 14548 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.938 11.979 0 0 76.668 76.313 0 0 0 0 74 74 0 0 0 0 1 1 0 0 11956 8785 287 8468 20507 23648 23648 1 HLAAVEER Unmodified 923.48248 0.48247924 1989 Q3UID0;Q6PDG5;Q3UNN4;P97496 Smarcc2;Smarcc1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 yes no 0 0 0 0 4 0 1 30.999 30.999 3 0.013903 7181 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.981 7.6349 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 3099.9 8786 1989 8469 20508 23649 23649 1 HLAGEVAK Unmodified 823.4552 0.45520186 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 6.5 0.5 1 1 36.432 36.432 3 0.011524 8941 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.91 15.23 158.61 125.85 105.99 153.54 101.5 36.546 149 130 112 148 102 37 2 2 2 2 1 1 9851.9 8787 2697 8470 20509;20510 23650;23651 23650 2 HLCELLAQQF Unmodified 1257.6176 0.61759251 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 9.33 2.62 1 1 1 71.9 71.9 2;3 0.0043723 26697 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.324 54.125 89.567 112.06 0 110.33 61.226 125.39 84 111 0 102 65 121 2 2 0 2 1 3 30996 8788 1400 8471 20511;20512;20513 23652;23653;23654 23654 3 HLDHVAALFPGDVDR Unmodified 1660.8322 0.8321534 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 8.5 2.69 1 1 1 1 56.079 56.079 3;4 5.0673E-05 18427 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.26 52.594 217.7 107.48 180.19 142.68 143.31 282.66 204 112 176 139 148 269 3 2 3 2 2 4 45204 8789 2555 8472 20514;20515;20516;20517 23655;23656;23657;23658 23655 4 HLDIEDK Unmodified 868.42905 0.42904669 742 D3Z0L4 Chchd3 yes yes 0 0 0 0 7 3.54 1 1 1 1 44.653 44.653 3 0.0040688 13340 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.942 18.675 0 39.368 56 80.882 0 108.73 0 37 56 74 0 102 0 1 1 1 0 1 10746 8790 742 8473 20518;20519;20520;20521 23659;23660;23661;23662 23660 4 HLDLSNVASYK Unmodified 1245.6354 0.63535107 3350 Q9WVE8;A0A2R8W6S4 Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 0 8 0 1 57.921 57.921 3 0.00085244 17559 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.536 41.995 79.08 63.828 0 50.278 0 0 74 65 0 46 0 0 1 1 0 1 0 0 7543.1 8791 3350 8474 20522 23663 23663 1 HLDVVDLSK Unmodified 1024.5553 0.55530983 482 A2AKH7;Q8JZX5;Q9D1G5;B0R031 Lrrc57 Leucine-rich repeat-containing protein 57 yes no 0 0 0 0 6.5 0.5 1 1 55.615 55.615 3 0.003858 17161 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.347 39.228 127.72 157.74 41.382 107.27 93.213 135.92 120 157 46 102 93 130 2 2 1 2 1 2 7164.7 8792 482 8475 20523;20524 23664;23665 23665 2 HLDYLIQATNETNVNIPQMADTLFER Unmodified 3045.4866 0.48658493 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 6 0 1 88.092 88.092 4 0.020769 33144 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.024 18.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2268 8793 2129 8476 20525 23666 23666 1 HLEEEMSLEK Unmodified 1243.5755 0.57545293 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 3.5 0.5 1 1 51.506 51.506 3 0.00060976 16878 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83 57.614 69.455 0 48.778 68.407 43.787 88.295 65 0 46 66 46 84 2 0 1 2 1 2 7848 8794 927 8477 20526;20527 23667;23668 23668 2 HLEEENR Unmodified 925.42536 0.42535829 150 A0A0R4J023;Q9JLZ3;A0A0R4J1L8;E9Q6L3;E9QMT1 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 7 6 1 1 21.835 21.835 3 0.0073136 3338 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.462 55.54 9.4902 69.218 21.886 24.57 38.861 14.924 9 66 24 24 38 14 1 3 2 2 2 1 9554 8795 150 8478 20528;20529 23669;23670;23671 23669 3 HLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGK Unmodified 3845.9074 0.90735834 1289 O89053;G3UYK8;A0A0U1RPY8 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 9.5 3.5 1 1 101.51 101.51 4 1.275E-14 41090 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.858 59.117 29.958 17.132 0 20.767 0 23.452 28 18 0 19 0 22 2 2 0 1 0 2 6401.9 8796 1289 8479 20530;20531 23672;23673 23673 2 HLEGLSEEAIMELNLPTGIPIVYELDK Unmodified 3022.5573 0.55729025 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 6.5 0.5 1 1 98.218 98.218 4 3.8206E-12 36788 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.778 51.89 22.321 31.326 9.1631 30.604 19.874 20.254 21 31 9 28 19 19 2 2 1 1 1 1 3089 8797 3126 8480 20532;20533 23674;23675;23676 23675 3 HLEIIYAINQR Unmodified 1368.7514 0.75138388 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 10 2.16 1 1 1 58.014 58.014 2;3 4.0802E-06 16987 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.87 82 29.753 175.43 183.72 17.142 285.69 125.57 28 167 176 19 278 120 1 2 2 1 3 1 44982 8798 2555 8481 20534;20535;20536 23677;23678;23679 23678 3 HLEILQLSK Unmodified 1079.6339 0.63389451 729 D3YZP3;D3Z2D1;P0C192 Lrrc4b Leucine-rich repeat-containing protein 4B yes no 0 0 0 0 9 0 1 61.032 61.032 3 0.0019777 18271 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.294 30.133 0 0 0 71.045 0 49.036 0 0 0 65 0 46 0 0 0 1 0 1 10538 8799 729 8482 20537 23680 23680 1 HLEINPDHPIVETLR Unmodified 1781.9424 0.94243213 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 6.6 3.26 1 2 1 1 54.495 54.495 3;4 0.00012175 18353 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.944 52.325 194.34 230.43 247.58 185.36 315.19 229.27 185 231 250 185 317 222 3 3 3 2 4 3 91945 8800 1354 8483 20538;20539;20540;20541;20542 23681;23682;23683;23684;23685 23683 5 HLEINPDHSIIETLR Unmodified 1785.9373 0.93734675 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 7 2.77 2 2 1 1 58.368 58.368 3;4 8.2464E-12 20316 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.66 101.93 405.34 219.79 517.52 466.02 448.94 451.94 381 231 501 455 453 435 7 5 7 7 6 8 101580 8801 1322 8484 20543;20544;20545;20546;20547;20548 23686;23687;23688;23689;23690;23691;23692;23693;23694 23687 9 HLFLTSK Unmodified 844.48069 0.48068833 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 11 0 1 49.197 49.197 3 0.029079 11267 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.577 10.404 222.23 0 340.79 0 271.96 0 209 0 316 0 260 0 1 0 1 0 1 0 19730 8802 2999 8485 20549 23695 23695 1 HLFPIQVIK Unmodified 1093.6648 0.6648007 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 11 0.816 1 1 1 65.411 65.411 3 0.00059149 15998 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.439 54.147 218.77 24.446 106.67 275.21 137.29 125.07 204 28 102 259 139 121 2 1 1 2 2 2 74639 8803 2790 8486 20550;20551;20552 23696;23697;23698 23698 3 HLGLPVFNTVK Unmodified 1223.7026 0.70264277 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 11.4 1.02 1 2 1 1 63.584 63.584 3;4 2.2201E-10 17719 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.23 87.902 379.78 268.43 714.74 583.35 583 509.95 357 264 694 575 572 486 2 2 4 3 3 3 200190 8804 3337 8487 20553;20554;20555;20556;20557 23699;23700;23701;23702;23703;23704 23699 6 HLGTLNFGGIR Deamidation (N) 1184.6302 0.63020611 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 1 0 0 8 0 2 58.2 58.2 3 0.015547 17646 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.471 20.218 88.877 36.052 0 78.974 101.44 47.206 83 37 0 74 102 46 2 1 0 2 2 1 7079.1 8805 1151 8488 20558;20559 23705;23706 23705 304 2 HLGTLNFGGIR Unmodified 1183.6462 0.64619053 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 10.7 1.7 1 1 1 54.763 54.763 3 2.5683E-08 13674 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.27 64.271 218.3 187.47 0 380.48 226.27 361.02 204 185 0 352 235 343 2 2 0 3 2 2 125490 8806 1151 8488 20560;20561;20562 23707;23708;23709 23708 3 HLGVPNGR Unmodified 848.46168 0.46168422 1854 P97492;D6RCH4 Rgs14 Regulator of G-protein signaling 14 yes no 0 0 0 0 6 0 1 34.78 34.78 3 0.014905 8190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.167 31.047 40.774 0 0 0 19.874 0 38 0 0 0 19 0 1 0 0 0 1 0 927.18 8807 1854 8489 20563 23710 23710 1 HLHMGQFPNNIK Deamidation (N) 1435.7031 0.70305348 3423 yes yes 0 1 0 0 9 0 1 79.049 79.049 3 0.043551 26922 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.188 8.2287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 8808 3423 8490 20564 23711 23711 1150 1 HLHTLIFNAAR Unmodified 1291.7149 0.71493879 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 12 0 2 45.796 45.796 3;4 0.0010108 8744 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.664 36.1 84.055 29.315 148.16 74.114 97.007 148.6 79 28 142 76 100 142 1 1 2 1 1 2 6776.9 8809 1977 8491 20565;20566 23712;23713 23713 2 HLIEDLIIESSK Unmodified 1395.7609 0.76094551 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 9.5 3.5 1 1 75.997 75.997 3 0.0004862 27633 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.267 33.743 29.687 27.172 36.989 28.399 0 39.442 28 28 37 28 0 37 1 1 1 1 0 1 4303.8 8810 3344 8492 20567;20568 23714;23715 23714 2 HLIIGVSSDR Unmodified 1095.6037 0.60365701 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;A2AKV0;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 7.5 0.5 1 1 45.291 45.291 3 5.5579E-05 11698 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.807 46.659 29.691 0 59.276 26.189 46.913 0 28 0 56 28 46 0 1 0 1 1 1 0 5513.1 8811 484;2493 8493 20569;20570 23716;23717 23717 2 HLIPAANTGESK Unmodified 1236.6463 0.64625011 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 7.86 2.36 3 1 1 1 1 42.463 42.463 3;4 3.587E-21 10799 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 158.08 125.47 1070.1 1106.8 1049.6 1295.7 1078.4 1173.1 1006 1116 1056 1258 1097 1123 9 11 10 11 8 9 377750 8812 1715 8494 20571;20572;20573;20574;20575;20576;20577 23718;23719;23720;23721;23722;23723;23724;23725;23726;23727;23728;23729 23722 12 HLIPAANTGESK Deamidation (N) 1237.6303 0.63026569 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 1 0 0 7 0 1 42.211 42.211 4 0.002211 10861 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.598 25.056 196 237.39 220.64 0 240.58 0 185 239 218 0 230 0 1 1 1 0 1 0 6688 8813 1715 8494 20578 23730 23730 668 1 HLIPAANTGESKVFYYK Unmodified 1937.0047 0.0046980325 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 1 9 0 1 59.259 59.259 4 0.049949 17620 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.815 14.899 60.088 0 0 59.651 82.804 37.079 56 0 0 56 83 37 1 0 0 1 1 1 4088.7 8814 1715 8495 20579 23731 23731 1 HLIVLINK Unmodified 948.61204 0.61203685 2627 Q8R050 Gspt1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 0 1 0 1 58.985 58.985 3 0.0074604 19103 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.915 34.662 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8815 2627 8496 20580 23732 23732 1 HLLDRDPLTK Unmodified 1206.6721 0.67207093 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 1 7.5 0.5 1 1 49.065 49.065 4 0.025586 14142 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.741 29.961 0 77.635 65.833 36.517 38.702 0 0 74 65 37 37 0 0 2 1 1 1 0 5056.3 8816 1896 8497 20581;20582 23733;23734 23733 2 HLLGVEDLLQK Unmodified 1263.7187 0.71868677 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.2 0.748 1 2 2 70.368 70.368 3;4 1.3728E-10 24262 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.36 82.203 486.45 305.99 218 381.6 522.51 303.35 456 313 223 375 523 293 4 2 1 4 4 2 119450 8817 2148 8498 20583;20584;20585;20586;20587 23735;23736;23737;23738;23739 23735 5 HLLNVINENFGTLAFCR Unmodified 2017.0204 0.020364872 1162 Q3TMN1;Q3UI33;O08663 Metap2 Methionine aminopeptidase 2 yes no 0 0 0 0 12 0 1 78.639 78.639 3 2.3215E-09 21226 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.513 68.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8818 1162 8499 20588 23740 23740 1 HLLPLVQCPTLIVHGEKDPLVPR Unmodified 2630.473 0.47304753 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 1 9 0 1 69.748 69.748 5 0.00015105 22539 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.808 40.274 48.941 0 70.083 0 0 88.478 46 0 65 0 0 83 1 0 1 0 0 1 5432.6 8819 2636 8500 20589 23741 23741 1 HLLWDLGK Unmodified 980.54435 0.54435122 1038 F8WGB3;Q9CZB0 Sdhc Succinate dehydrogenase cytochrome b560 subunit, mitochondrial yes no 0 0 0 0 9 0 1 65.412 65.412 3 0.0052881 20483 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.127 41.807 0 20.216 0 70.403 34.147 38.468 0 19 0 65 37 37 0 1 0 1 1 1 3513.2 8820 1038 8501 20590 23742 23742 1 HLNATVNNLQTK Unmodified 1351.7208 0.72081203 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 8 0 1 43.707 43.707 3 0.0001482 10936 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.494 54.013 59.76 65.13 0 99.613 108.23 96.05 56 65 0 93 111 93 1 1 0 1 1 1 7518.3 8821 3056 8502 20591 23743 23743 1 HLNDESTSK Unmodified 1029.4727 0.47270242 2410 Q8BHZ0 Fam49a Protein FAM49A yes yes 0 0 0 0 4 0 1 30.595 30.595 3 0.042738 7138 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.352 26.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8822 2410 8503 20592 23744 23744 1 HLNDETTSK Unmodified 1043.4884 0.48835248 2800 Q921M7 Fam49b Protein FAM49B yes yes 0 0 0 0 9 4 1 1 31.32 31.32 3 0.0023247 7116 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.067 53.824 59.401 73.846 110.57 132.15 178.03 0 56 74 112 130 176 0 1 1 2 2 2 0 11957 8823 2800 8504 20593;20594 23745;23746 23746 2 HLNEIDLFHCIDPNDSK Unmodified 2065.9527 0.95273882 3304 Q9R0Q7;D3Z7C6 Ptges3 Prostaglandin E synthase 3 yes no 0 0 0 0 7.2 2.99 2 1 1 1 66.764 66.764 4 1.8827E-06 23127 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.77 80.123 246.96 309.01 402.09 321.36 224.5 369.9 232 305 399 316 231 352 3 5 5 5 3 4 43692 8824 3304 8505 20595;20596;20597;20598;20599 23747;23748;23749;23750;23751;23752 23750 6 HLNLSGNK Unmodified 881.47191 0.47191456 720 D3YYE1;D3Z7M9;O35381;F6UFG6;Q64G17 Anp32a;Anp32c Acidic leucine-rich nuclear phosphoprotein 32 family member A;Putative acidic leucine-rich nuclear phosphoprotein 32 family member C yes no 0 0 0 0 9 0.816 1 1 1 38.707 38.707 3 0.0017749 8616 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.25 71.086 567.84 439.75 491.17 607.69 594.87 597.04 534 457 506 593 615 576 2 2 2 2 2 2 51210 8825 720 8506 20600;20601;20602 23753;23754;23755 23753 3 HLPKDPMFK Unmodified 1111.5848 0.58483582 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 1 8 0 1 51.712 51.712 4 0.039341 14743 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.198 20.684 89.059 0 0 0 0 148.17 83 0 0 0 0 139 1 0 0 0 0 1 8622.4 8826 3011 8507 20603 23756 23756 1 HLPPLVGR Unmodified 887.53412 0.53412088 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 10 1.87 1 1 1 1 43.828 43.828 3 0.011709 11026 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.76 29.531 177.83 174.14 131.44 151.42 35.921 0 167 177 130 140 37 0 3 4 2 3 1 0 19737 8827 2730 8508 20604;20605;20606;20607 23757;23758;23759;23760 23757 4 HLPVSPGK Unmodified 833.47594 0.4759373 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 8 0 1 40.431 40.431 3 0.0071255 9372 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.198 41.673 119.1 0 0 88.612 112.04 0 111 0 0 83 111 0 1 0 0 1 1 0 4669.7 8828 3449;3451 8509 20608 23761 23761 1 HLQAAFEDGFDNCDAGWLSDR Unmodified 2423.0237 0.023671928 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 7.33 4.03 1 1 1 71.207 71.207 3 1.2151E-05 26139 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.541 43.722 29.995 20.216 8.2453 39.95 0 50.102 28 19 9 37 0 47 1 1 1 2 0 2 11893 8829 144 8510 20609;20610;20611 23762;23763;23764 23763 3 HLQAEVK Unmodified 823.4552 0.45520186 545;1894 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560;Q0KL02;A0A2I3BRP6 Kalrn;Trio Kalirin;Triple functional domain protein no no 0 0 0 0 6 0 1 35.849 35.849 3 0.0065258 8721 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.241 37.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8830 545;1894 8511 20612 23765 23765 1 HLQAVDYAAR Unmodified 1142.5833 0.58325592 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 8.67 3.09 1 1 1 38.3 38.3 3 0.0013799 9961 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.65 39.465 0 0 0 120.46 45.769 137.27 0 0 0 111 46 130 0 0 0 2 1 2 43231 8831 3216 8512 20613;20614;20615 23766;23767;23768 23766 3 HLQDLFAPLVVR Unmodified 1406.8034 0.80341945 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 10.2 0.829 1 1 2 74.564 74.564 2;3 8.3045E-12 22028 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.51 80.402 189.39 131.88 62.749 37.88 141.42 204.17 177 130 65 37 140 194 5 3 2 1 4 4 127760 8832 2301 8513 20616;20617;20618;20619 23769;23770;23771;23772;23773;23774 23774 6 HLQEIFVPLVVR Unmodified 1448.8504 0.85036964 912 S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps2 Calcium-dependent secretion activator 2 yes no 0 0 0 0 10 0 1 71.132 71.132 3 0.0031056 21029 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.555 36.893 0 0 55 0 0 0 0 0 55 0 0 0 0 0 1 0 0 0 3077.6 8833 912 8514 20620 23775 23775 1 HLQEYQDLLNVK Deamidation (N) 1499.762 0.76200815 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 1 0 0 8.67 3.09 1 1 1 62.694 62.694 3 0.00052451 20566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.17 35.977 416.92 410.12 453.86 360.74 534.79 575.3 393 419 459 364 546 554 3 3 3 3 3 3 244950 8834 1304 8515 20621;20622;20623 23776;23777;23778 23777 358 3 HLQEYQDLLNVK Unmodified 1498.778 0.77799256 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 7.5 0.5 1 1 62.853 62.853 3;4 0.0007397 19766 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.088 33.455 177.98 114.97 106.24 69.541 153.38 222.68 167 121 102 65 157 213 2 2 1 1 2 2 62682 8835 1304 8515 20624;20625 23779;23780 23780 2 HLQLAIR Unmodified 849.51847 0.51847082 1468;645;1338 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4;Q6GSS7;A0A0N4SV66;Q8CGP4;Q8R1M2;Q64523;Q3THW5;P0C0S6;Q8R029;P27661 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a;Hist2h2aa1;Hist1h2aa;H2afj;Hist2h2ac;H2afv;H2afz;H2afx Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3;Histone H2A type 2-A;Histone H2A;Histone H2A.J;Histone H2A type 2-C;Histone H2A.V;Histone H2A.Z;Histone H2AX no no 0 0 0 0 8.6 4.22 1 1 1 1 1 43.77 43.77 3 1.3548E-26 12879 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 155.73 47.497 1058.1 1074.1 925.56 1330.7 1337.5 1568.3 995 1085 924 1291 1373 1507 4 3 5 6 2 5 411840 8836 645;1338;1468 8516 20626;20627;20628;20629;20630 23781;23782;23783;23784;23785;23786;23787 23787 7 HLSSCAAPAPLTSAER Unmodified 1666.8097 0.80970339 3361 Q9Z0P5;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 5 0 1 42.016 42.016 3 0.00010664 12128 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.543 51.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8837 3361 8517 20631 23788 23788 1 HLSSGDLLR Unmodified 996.53524 0.53524309 3321 Q9WTP7 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 42.702 42.702 3 0.00084327 11950 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.258 54.417 88.368 35.457 86.013 27.379 122.39 84.986 83 37 83 28 121 83 2 1 2 1 2 2 9579.8 8838 3321 8518 20632;20633 23789;23790 23789 2 HLSSVSR Unmodified 784.41915 0.4191507 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 9.5 1.5 1 1 23.373 23.373 2 0.015155 3566 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.813 50.612 9.6227 6.7991 0 5.2925 9.1709 0 9 7 0 5 9 0 1 1 0 1 1 0 710.52 8839 2998 8519 20634;20635 23791;23792 23792 2 HLSVNDLPVGR Unmodified 1205.6517 0.65166983 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 50.24 50.24 3 7.9233E-17 15463 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 165.18 139.62 59.281 209.75 198.11 0 285.24 161.43 56 204 195 0 278 157 1 3 3 0 3 2 48280 8840 1422 8520 20636;20637;20638 23793;23794;23795 23793 3 HLTEYFTFK Unmodified 1184.5866 0.58660996 1786;811;374 A0A2I3BPC5;P48455;E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cc;Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 10 1.41 1 1 1 1 1 63.476 63.476 3 6.026E-05 19512 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.6 87.522 481.73 648.84 551.03 228.75 576.43 767.71 454 649 539 223 578 733 3 5 3 2 4 4 154120 8841 374;811;1786 8521 20639;20640;20641;20642;20643 23796;23797;23798;23799;23800 23797 5 HLTGEFEK Unmodified 959.47125 0.47124585 1744 P62827;Q14AA6;Q61820 Ran;1700009N14Rik;Rasl2-9 GTP-binding nuclear protein Ran;GTP-binding nuclear protein Ran, testis-specific isoform yes no 0 0 0 0 6 0 1 44.141 44.141 3 0.015286 12634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.859 25.504 118.5 119.69 0 221.03 103.01 85.538 111 120 0 204 111 83 1 1 0 1 1 1 11199 8842 1744 8522 20644 23801 23801 1 HLVDEPQNLIK Unmodified 1304.7089 0.70885036 656 CON__P02769 yes yes 0 0 0 0 6 0 1 54.739 54.739 3 0.00017306 17567 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.685 44.689 48.778 115.92 228 136.69 87.615 68.078 46 111 223 139 92 65 1 1 2 2 2 1 10954 + 8843 656 8523 20645 23802;23803 23803 2 HLVGVCYTEEEAK Unmodified 1533.7133 0.71334339 3030 Q9D0M3;A0A2R8VHK1 Cyc1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 0 8 3.56 1 1 1 48.532 48.532 3 2.3065E-21 15492 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 153.95 134.34 157.56 42.346 230.77 161.16 194.26 67.257 148 46 223 158 195 65 2 1 3 2 3 1 30105 8844 3030 8524 20646;20647;20648 23804;23805;23806 23804 3 HLVHSVQK Unmodified 946.53485 0.53484916 784;582;1897 D3Z709;Q9D415;Q0VF59;Q8BJ42;B1AS06;Q6PFD5 Dlgap1;Dlgap2;Dlgap3 Disks large-associated protein 1;Disks large-associated protein 2;Disks large-associated protein 3 no no 0 0 0 0 9 0 1 31.179 31.179 3 0.009885 5321 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.48 41.332 20.27 23.105 0 20.348 22.303 23.882 19 23 0 19 23 23 1 1 0 1 1 1 1358.2 8845 784;1897;582 8525 20649 23807 23807 1 HLWDYTFGPEK Unmodified 1391.651 0.65100113 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 9.67 2.49 1 1 1 66.1 66.1 3 4.9408E-06 23896 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.21 74.408 226.35 334.72 322.52 165.09 177.34 401.09 213 334 315 158 176 379 2 4 3 2 2 3 60653 8846 1690 8526 20650;20651;20652 23808;23809;23810;23811 23811 4 HLYDFVGNIR Unmodified 1232.6302 0.63020611 121 A0A0M3HEP7;P70704;A0A0J9YV34 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 11 2 1 1 59.533 59.533 3 0.0010781 17726 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.294 50.784 59.599 44.177 44.754 46.396 64.567 37.6 56 46 46 46 65 37 1 1 1 1 1 1 10908 8847 121 8527 20653;20654 23812;23813 23812 2 HLYTLDGGDIINALCFSPNR Unmodified 2275.1056 0.10555106 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 9 0 2 79.959 79.959 3;4 1.6145E-38 27345 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.99 121.88 19.978 0 68.666 63.1 66.378 0 19 0 65 65 65 0 1 0 1 2 1 0 14157 8848 1792 8528 20655;20656 23814;23815 23815 2 HMALDMGNEIDTQNR Unmodified 1743.7669 0.7668523 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 5 0.816 1 1 1 50.949 50.949 3 3.5028E-30 16483 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 157.09 139.58 39.414 135.23 25.698 57.921 170.72 37.857 37 130 28 56 167 37 1 3 1 2 3 1 22618 8849 1681 8529 20657;20658;20659 23816;23817;23818 23817 3 HMGGVLAVANIR Unmodified 1236.6761 0.67611045 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 9 0 1 52.797 52.797 3 0.045775 14378 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.18 24.954 59.565 0 87.938 35.2 0 0 56 0 83 37 0 0 1 0 1 1 0 0 3639.4 8850 3259 8530 20660 23819 23819 1 HMGLFDHAAK Unmodified 1125.5389 0.53894826 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 45.265 45.265 3;4 0.00095905 11848 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.378 57.11 315.56 239.35 321.17 399.84 329.46 386.08 297 250 315 389 342 371 3 3 2 4 3 3 26751 8851 307 8531 20661;20662;20663 23820;23821;23822;23823 23821 4 HMLDLQK Unmodified 883.45857 0.45857268 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 8 0 1 48.235 48.235 3 0.0064941 13006 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.801 35.297 39.179 0 87.679 43.309 92.67 76.24 37 0 83 46 93 74 1 0 1 1 1 1 4977.7 8852 533 8532 20664 23824 23824 1 HMLPTVLR Unmodified 965.54806 0.54805639 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 10 0.816 1 1 1 47.493 47.493 3 0.0042427 10693 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.282 58.179 69.125 63.231 121.86 65.878 34.355 77.904 65 65 121 65 37 74 1 2 2 1 1 2 42318 8853 2272 8533 20665;20666;20667 23825;23826;23827 23826 3 HMMAFIEQEANEKAEEIDAK Unmodified 2333.0668 0.066782296 1597 P50518;A0A0N4SW07;Q9D593 Atp6v1e1;Atp6v1e2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 1 13 0 1 74.948 74.948 5 0.00063586 28389 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.09 32.001 59.48 54.64 55.83 26.572 37.481 0 56 56 56 28 37 0 1 1 1 1 1 0 5911.5 8854 1597 8534 20668 23828 23828 1 HMQAVAEAWAQLQGSSAAR Unmodified 2010.9694 0.96939193 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 11 0 1 64.364 64.364 3 7.3539E-08 17524 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.776 57.047 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 5187.3 8855 2186 8535 20669 23829 23829 1 HNAQGQGNGLR Deamidation (N) 1151.5432 0.54318202 1588 P49443;Q9EQE2;A0A1Y7VNK7;A0A1Y7VJZ4;A0A1Y7VL98 Ppm1a Protein phosphatase 1A yes no 0 1 0 0 6.67 4.5 1 1 1 20.575 20.575 3 0.0014224 3150 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.763 58.526 9.5051 18.283 13.641 13.864 42.128 40.372 9 18 14 14 42 39 1 2 1 1 2 3 4718.4 8856 1588 8536 20670;20671;20672 23830;23831;23832 23830 603 3 HNDDEQYAWESSAGGSFTVR Unmodified 2254.9516 0.95155284 1322;1354 P07901;B7ZC50;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 5.17 3.53 2 3 1 56.005 56.005 3 1.0067E-10 18735 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.932 78.003 20.178 87.66 84.886 37.746 18.936 39.442 19 85 83 38 19 37 1 4 3 2 1 1 16520 8857 1322;1354 8537 20673;20674;20675;20676;20677;20678 23833;23834;23835;23836;23837;23838;23839 23839 7 HNDVIPTMAQGVTEYK Unmodified 1801.8669 0.86688392 2358 Q8BFP9 Pdk1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial yes yes 0 0 0 0 11 0 1 107.18 107.18 3 0.021975 35194 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.638 5.4099 0 0 12.733 5.6269 9.1555 0 0 0 12 6 9 0 0 0 1 1 1 0 2673.3 8858 2358 8538 20679 23840 23840 1 HNEETGDNVGPLIIK Unmodified 1634.8264 0.82639932 2760 Q91WS0 Cisd1 CDGSH iron-sulfur domain-containing protein 1 yes yes 0 0 0 0 5 0.816 1 1 1 54.699 54.699 3;4 5.3214E-30 18186 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 154.72 133.77 188.36 210.91 170.4 160.04 132.72 254.18 176 204 176 158 139 242 2 2 2 2 2 3 33034 8859 2760 8539 20680;20681;20682 23841;23842;23843 23842 3 HNGPENWHK Deamidation (N) 1118.4894 0.48935553 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 1 0 0 5 0 1 36.634 36.634 4 0.053827 9456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.603 27.816 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 5316.4 8860 1296 8540 20683 23844 23844 354 1 HNGPENWHK Unmodified 1117.5053 0.50533995 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 0 0 0 6 0 1 32.96 32.96 3 0.063188 7349 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.303 16.855 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 1384.6 8861 1296 8540 20684 23845 23845 1 HNGYDPR Deamidation (N) 858.36203 0.36202975 1490 P30275;A2ARP5;B0R0E9;B0R0F0;Q6P8J7 Ckmt1;Ckmt2 Creatine kinase U-type, mitochondrial;Creatine kinase S-type, mitochondrial yes no 0 1 0 0 3 0 1 23.712 23.712 3 0.065081 4481 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.265 26.026 88.192 51.936 101.75 113.41 98.174 96.337 83 56 102 111 102 93 1 1 1 1 1 1 17590 8862 1490 8541 20685 23846 23846 1 HNGYDPR Unmodified 857.37801 0.37801417 1490 P30275;A2ARP5;B0R0E9;B0R0F0;Q6P8J7 Ckmt1;Ckmt2 Creatine kinase U-type, mitochondrial;Creatine kinase S-type, mitochondrial yes no 0 0 0 0 4 0 1 21.912 21.912 3 0.022549 3463 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.717 28.979 20.089 37.709 18.194 0 38.702 0 19 37 19 0 37 0 1 1 1 0 1 0 3487.4 8863 1490 8541 20686 23847 23847 1 HNHDLSSYQDTIQQLENELR Unmodified 2439.1415 0.14147888 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 4.67 0.471 1 2 72.591 72.591 3;4 1.429E-08 26711 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.776 56.951 98.317 16.894 0 80.882 19.874 58.63 93 19 0 74 19 55 3 1 0 1 1 1 10651 8864 154 8542 20687;20688;20689 23848;23849;23850;23851 23848 4 HNIMDFAMPYFIQVMK Unmodified 1983.9409 0.94091726 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 12.2 0.829 1 1 2 93.118 93.118 3;4 4.7167E-05 30091 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.624 71.707 39.406 58.945 115.69 0 57.908 58.879 37 57 111 0 56 56 1 3 3 0 2 2 14627 8865 2185 8543 20690;20691;20692;20693 23852;23853;23854;23855;23856 23853 5 HNKPEVEVR Unmodified 1106.5833 0.58325592 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 1 5.5 0.5 1 1 32.464 32.464 4 0.00058886 6924 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.277 79.952 289.39 259.36 375.83 265.29 278.11 288.41 273 268 374 268 287 278 2 2 2 2 2 2 28052 8866 1663 8544 20694;20695 23857;23858 23858 2 HNLASYYPEPK Unmodified 1317.6354 0.63535107 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 47.587 47.587 3 0.0044959 13380 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.452 37.141 30.044 58.995 35.225 28.505 38.702 0 28 56 37 28 37 0 1 1 1 1 1 0 7107.7 8867 2432 8545 20696;20697 23859;23860 23860 2 HNLCGETEEER Unmodified 1372.5677 0.56774179 696 D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YZ29;D3YX76;P15626;D3YVP9 Gstm7;Gstm2;Gstm6 Glutathione S-transferase Mu 7;Glutathione S-transferase Mu 2 no no 0 0 0 0 3 0 1 27.068 27.068 3 0.0096465 6054 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.116 21.389 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8868 696 8546 20698 23861 23861 1 HNLQDFINIK Unmodified 1240.6564 0.65642086 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8.5 0.5 1 1 63.019 63.019 2;3 0.0036235 19329 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.763 50.779 0 86.367 72.788 84.821 82.922 0 0 84 74 83 83 0 0 2 1 1 1 0 67648 8869 1382 8547 20699;20700 23862;23863 23863 2 HNNLDLVIIR Deamidation (N) 1206.6721 0.67207093 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 1 0 0 5 0 1 61.944 61.944 3 0.0044931 21628 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.399 57.362 20.292 18.848 0 9.4714 19.439 0 19 19 0 9 19 0 1 1 0 1 1 0 1746 8870 2734 8548 20701 23864 23864 982 1 HNNLDLVIIR Unmodified 1205.6881 0.68805534 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 54.884 54.884 3 2.4606E-05 18370 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.53 75.735 166.44 153.39 258.84 36.277 242.53 229.73 157 158 250 37 241 222 2 2 3 1 3 3 50969 8871 2734 8548 20702;20703;20704 23865;23866;23867 23867 3 HNQLPLVIEFTEQTAPK Unmodified 1964.0367 0.036726442 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 7 0 1 71.962 71.962 3 0.00019206 24843 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.525 40.447 20.292 18.848 0 0 0 39.442 19 19 0 0 0 37 1 1 0 0 0 1 2550.9 8872 1331 8549 20705 23868 23868 1 HNSTTSSTSSGGYR Unmodified 1440.6229 0.62294848 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3 Abi1 Abl interactor 1 yes no 0 0 0 0 4 0 1 18.419 18.419 3 0.0014356 2587 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.514 48.589 0 6.384 0 0 6.276 0 0 6 0 0 6 0 0 1 0 0 1 0 732.1 8873 634 8550 20706 23869 23869 1 HNYYTSISK Unmodified 1111.5298 0.52982336 1246 O70250 Pgam2 Phosphoglycerate mutase 2 yes yes 0 0 0 0 7 0 1 41.325 41.325 3 0.0068153 10467 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.518 36.137 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8874 1246 8551 20707 23870 23870 1 HPASEPNLDLER Unmodified 1376.6684 0.66844211 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6Q750;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 3 0 1 40.786 40.786 3 0.00022255 12418 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.268 48.24 0 0 0 29.927 36.008 38.414 0 0 0 28 37 37 0 0 0 1 1 1 2690.8 8875 581 8552 20708 23871 23871 1 HPDADSLYVEK Unmodified 1272.5986 0.59863121 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 4.5 0.5 1 1 47.61 47.61 3 0.00033971 15132 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.658 49.117 69.57 73.287 45.336 88.017 0 59.696 65 74 46 83 0 56 1 2 1 2 0 1 6583.3 8876 432 8553 20709;20710 23872;23873 23872 2 HPDEPVLLEEPVVLALAEK Unmodified 2097.1358 0.13577179 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 0 6.4 3.38 2 1 1 1 85.166 85.166 3;4 8.8828E-08 32504 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.203 68.38 216.93 137.63 276.13 177.43 127.47 157.33 204 140 270 178 130 151 5 6 6 5 4 5 27468 8877 3214 8554 20711;20712;20713;20714;20715 23874;23875;23876;23877;23878;23879;23880;23881 23876 8 HPDVAATR Unmodified 865.44061 0.44061443 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 5 0 1 23.407 23.407 3 0.061329 3704 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.994 18.254 0 38.738 37.71 0 0 20.254 0 37 37 0 0 19 0 1 1 0 0 1 2711.5 8878 799 8555 20716 23882 23882 1 HPELADK Unmodified 808.40792 0.40791731 1785 P63325;A0A338P7K4;Q3UW83;A0A338P731 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 5 0 1 35.172 35.172 3 0.010793 8800 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.213 41.135 177.94 84.637 138.55 131.84 106.09 115.3 167 93 139 130 111 111 1 1 1 1 1 1 8858.7 8879 1785 8556 20717 23883 23883 1 HPEPFFALAK Unmodified 1155.6077 0.60767975 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 8 0.816 1 1 1 61.149 61.149 3 0.00090578 19119 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.662 55.617 260.23 135.8 214.49 155.57 230.94 133.57 250 139 213 158 232 130 3 1 2 2 2 1 23793 8880 2702 8557 20718;20719;20720 23884;23885;23886 23885 3 HPFAQAVGR Unmodified 981.51445 0.51444807 2734 Q91VA7;V9GXV0 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes no 0 0 0 0 10 1 1 1 33.738 33.738 2;3 0.001013 6165 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.32 82.319 39.701 0 0 20.767 0 74 37 0 0 19 0 74 1 0 0 1 0 1 6789.6 8881 2734 8558 20721;20722 23887;23888 23887 2 HPFLTALK Unmodified 925.53854 0.53853756 1498 P31750;D3Z783;D3YXM7;D3Z3N2 Akt1;Akt2 RAC-alpha serine/threonine-protein kinase no no 0 0 0 0 11.5 0.5 1 1 53.855 53.855 3 0.002594 13028 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.616 62.762 60.088 0 0 158 46.111 58.38 56 0 0 158 46 56 1 0 0 1 1 1 23955 8882 1498 8559 20723;20724 23889;23890 23889 2 HPFVQEK Unmodified 883.4552 0.45520186 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 7 0.816 1 1 1 37.002 37.002 3 0.010186 8590 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.035 42.914 415.89 295.25 655.28 487.44 249.94 628.2 391 309 644 486 259 596 2 2 3 3 2 3 37405 8883 3275 8560 20725;20726;20727 23891;23892;23893 23892 3 HPGDLQR Unmodified 821.4144 0.41439968 229 P98084;A0A0U1RPM0 Apba2 Amyloid beta A4 precursor protein-binding family A member 2 yes no 0 0 0 0 4 0 1 32.579 32.579 3 0.056357 8019 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.067 22.912 20.387 0 0 0 9.414 0 19 0 0 0 9 0 1 0 0 0 1 0 1237.9 8884 229 8561 20728 23894 23894 1 HPGGGDYEEL Unmodified 1072.4462 0.44615331 2070 Q5U3K5 Rabl6 Rab-like protein 6 yes yes 0 0 0 0 1.5 0.5 1 1 43.321 43.321 2 0.011022 12143 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.038 58.214 29.923 0 29.274 19.552 65.773 38.401 28 0 28 19 65 37 1 0 2 1 2 1 11818 8885 2070 8562 20729;20730 23895;23896 23895 2 HPGVLPLFR Unmodified 1034.6025 0.6025348 1084 G3X9J0 Sipa1l3 yes yes 0 0 0 0 11 0 1 55.237 55.237 3 0.034086 13641 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.283 31.736 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8886 1084 8563 20731 23897 23897 1 HPHDIIDDINSGAVECPAS Unmodified 2045.9113 0.91126793 1527 P35979 Rpl12 60S ribosomal protein L12 yes yes 0 0 0 0 3 0 1 58.06 58.06 3 3.7152E-07 20393 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.593 54.834 9.51 29.151 0 0 29.288 0 9 28 0 0 28 0 1 1 0 0 1 0 10853 8887 1527 8564 20732 23898 23898 1 HPLLHIQK Unmodified 984.58688 0.58688473 3046 Q9D1Q6 Erp44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 0 10 0 1 40.858 40.858 4 0.040985 8125 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.447 13.075 0 88.312 0 69.699 71.563 76.842 0 83 0 65 74 74 0 1 0 1 1 1 4970 8888 3046 8565 20733 23899 23899 1 HPNFLVVEK Unmodified 1081.592 0.59202969 3042 Q9D1K2 Atp6v1f V-type proton ATPase subunit F yes yes 0 0 0 0 11 2 1 1 52.871 52.871 3 0.016105 14609 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.092 22.693 208.51 105.67 292.9 229.91 271.98 270.46 195 102 287 231 279 261 1 1 2 2 2 2 19988 8889 3042 8566 20734;20735 23900;23901 23900 2 HPNGTQETILLNHTFNETQIEWFR Deamidation (N) 2925.4046 0.40456986 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 1 0 0 7.5 3.2 1 2 1 75.008 75.008 4 3.2314E-12 26547 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.049 67.448 148.72 56.466 57.438 97.543 170.2 69.29 139 56 56 93 167 65 3 2 2 2 3 1 52326 8890 2843 8567 20736;20737;20738;20739 23902;23903;23904;23905 23903 1009 4 HPNILQLVDVFVTR Unmodified 1649.9253 0.9253255 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 11 0.816 1 1 1 87.385 87.385 3 6.3749E-05 28247 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.789 53.639 69.468 132.27 20.558 63.813 80.264 73.803 65 131 19 60 79 70 2 4 1 3 3 3 26647 8891 1986 8568 20740;20741;20742 23906;23907;23908;23909;23910;23911;23912;23913 23907 8 HPNSVQEER Unmodified 1094.5105 0.51048491 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 2.5 0.5 1 1 19.798 19.798 3 0.0010721 2967 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.438 51.117 14.815 28.163 37.665 13.561 37.808 38.363 14 28 37 14 38 37 1 2 2 1 2 2 3230.3 8892 1039 8569 20743;20744 23914;23915 23915 2 HPQPFLR Unmodified 893.48717 0.48717069 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 8 0 1 35.054 35.054 3 0.058472 7003 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.37 10.185 0 68.053 66.247 0 0 49.036 0 65 65 0 0 46 0 1 1 0 0 1 3900.2 8893 2536 8570 20745 23916 23916 1 HPWIAGDTALSK Unmodified 1294.667 0.66698555 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 11 2 1 1 53.316 53.316 3 0.00018695 14768 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.74 53.449 157.96 113.24 226.77 155.46 197.92 211.82 149 120 223 158 203 204 2 2 2 2 2 2 21030 8894 2468 8571 20746;20747 23917;23918 23917 2 HPWICQR Unmodified 995.47595 0.47595408 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 9 0 1 35.203 35.203 3 0.010721 6813 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.311 51.754 59.745 0 57.717 57.768 0 0 56 0 56 56 0 0 1 0 1 1 0 0 10757 8895 103 8572 20748 23919 23919 1 HPWISHR Unmodified 931.47767 0.47766863 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 11 2.08 1 1 1 3 27.199 27.199 3 8.747E-05 5209 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.65 85.289 261.81 295.27 375.17 318.27 159.74 298.19 247 300 375 314 168 284 4 5 4 4 3 4 46341 8896 1355 8573 20749;20750;20751;20752;20753;20754 23920;23921;23922;23923;23924;23925;23926;23927 23926 8 HPWVCQR Unmodified 981.4603 0.46030401 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 10 1.87 1 1 1 1 31.583 31.583 3 0.0091064 5562 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.496 37.392 486.29 430.54 352.47 460.61 319.75 389.67 457 441 359 441 324 371 5 6 4 4 3 4 98144 8897 1475;2818 8574 20755;20756;20757;20758 23928;23929;23930;23931;23932;23933 23928 6 HQADIASYQDAIQQLDSELR Unmodified 2300.1033 0.10330246 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 7.33 4.03 1 1 1 74.518 74.518 3 2.9276E-23 27545 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.24 119.65 40.391 18.546 48.662 56.666 0 70.356 38 19 47 56 0 66 2 1 2 2 0 2 25366 8898 1415 8575 20759;20760;20761 23934;23935;23936 23934 3 HQAECALNER Unmodified 1226.5462 0.54621849 1231 O55033 Nck2 Cytoplasmic protein NCK2 yes yes 0 0 0 0 3 0 1 27.833 27.833 3 0.001293 6396 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.34 57.894 0 0 0 9.6778 8.4652 14.682 0 0 0 9 9 14 0 0 0 1 1 1 2361.6 8899 1231 8576 20762 23937 23937 1 HQAEVSGTQTTAQLK Unmodified 1597.806 0.80599822 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 5.75 0.829 2 1 1 37.915 37.915 3;4 5.5601E-05 10150 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.487 69.767 99.249 84.276 0 69.18 137.86 96.308 94 83 0 65 138 93 3 2 0 2 3 2 11554 8900 331 8577 20763;20764;20765;20766 23938;23939;23940;23941 23939 4 HQAFEAELHANADR Unmodified 1607.7441 0.74406667 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.8 3.66 1 2 1 1 37.826 37.826 3;4 2.2779E-22 9679 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.03 118.59 479.69 625.85 974.1 870.14 339.27 1403.8 454 633 964 854 394 1326 3 6 5 6 3 7 61663 8901 551 8578 20767;20768;20769;20770;20771 23942;23943;23944;23945;23946;23947;23948 23948 7 HQAFEAELSANQSR Unmodified 1586.7437 0.74373232 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.74 1 1 1 1 1 40.851 40.851 3 1.2717E-31 11723 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 164.93 148.49 277.21 219.39 111.7 162.44 238.02 221.6 260 223 112 158 240 213 5 4 2 3 4 4 94612 8902 551 8579 20772;20773;20774;20775;20776 23949;23950;23951;23952;23953;23954 23951 6 HQAFEAEVQANSGAIVK Unmodified 1797.901 0.90096124 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.5 3.2 1 2 1 53.155 53.155 3;4 2.0125E-08 17400 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.18 88.606 198.5 129.55 71.569 217.46 124.16 174.48 186 130 74 205 130 167 4 2 2 4 3 4 27210 8903 551 8580 20777;20778;20779;20780 23955;23956;23957;23958 23958 4 HQAFEAEVQANSGAIVK Deamidation (N) 1798.885 0.88497683 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 6 1 1 1 53.396 53.396 3 0.0011108 16102 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.278 32.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8904 551 8580 20781;20782 23959;23960 23960 149 2 HQAFMAELASNK Unmodified 1345.6449 0.6448699 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 0.816 1 1 1 52.907 52.907 3 0.0011141 15904 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.161 36.789 116.09 0 0 50.278 0 69.29 112 0 0 46 0 65 2 0 0 1 0 1 14255 8905 2148 8581 20783;20784;20785 23961;23962;23963 23961 3 HQAGPATRPDR Unmodified 1204.6061 0.60611663 2495 Q8C3Q5;F6T9T6 Shisa7 Protein shisa-7 yes no 0 0 0 1 4.5 0.5 1 1 18.148 18.148 4 0.001477 2559 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.385 51.946 9.6041 18 8.8971 17.791 13.827 0 9 18 9 17 14 0 1 1 1 1 1 0 2226.9 8906 2495 8582 20786;20787 23964;23965 23965 2 HQALQAEIAGHEPR Unmodified 1555.7855 0.78553755 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 37.79 37.79 3;4 5.1272E-11 9618 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.911 68.28 126.83 158.66 248.51 116.72 157.58 156.22 120 157 242 120 158 148 3 2 3 3 3 2 27453 8907 551 8583 20788;20789;20790 23966;23967;23968;23969;23970 23970 5 HQAQIDHYLGLANK Unmodified 1606.8216 0.82158871 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 8 0 3 51.288 51.288 3;4;5 6.3263E-05 14478 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.204 59.968 268.03 212.19 37.165 350.56 391.17 232.49 251 217 37 328 397 225 3 3 1 2 3 1 13716 8908 2886 8584 20791;20792;20793 23971;23972;23973 23973 3 HQAQVDQYLGLVR Unmodified 1525.8001 0.80012499 2583;2279 Q7M6W1;A3QM89;Q8K0T0 Rtn1 Reticulon;Reticulon-1 no no 0 0 0 0 8.5 2.69 1 1 1 1 55.447 55.447 3 2.4824E-19 18596 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 149.58 131.86 39.414 211.99 144.03 48.895 177.58 124.23 37 204 139 46 176 120 1 4 2 1 3 2 139670 8909 2279;2583 8585 20794;20795;20796;20797 23974;23975;23976;23977 23977 4 HQASINELKR Unmodified 1194.6469 0.64691881 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 7 0 1 34.702 34.702 4 0.0019275 7407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.842 22.33 118.21 0 149.91 216.22 0 187.62 111 0 148 206 0 176 1 0 1 1 0 1 8109.7 8910 526 8586 20798 23978 23978 1 HQDDTATATR Unmodified 1114.5003 0.50031415 843 E9PX94;Q8K1A6 Cc2d1a Coiled-coil and C2 domain-containing protein 1A yes no 0 0 0 0 1.5 0.5 1 1 16.754 16.754 3 6.5166E-16 2706 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 172.61 149.18 9.4656 12.838 21.295 13.665 19.579 20.761 9 13 21 14 20 20 2 2 2 2 2 2 4573.7 8911 843 8587 20799;20800 23979;23980 23979 2 HQEAEMAQNAVR Unmodified 1382.6361 0.63609612 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 3 0 1 32.798 32.798 3 0.00029902 8686 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.352 46.126 78.993 0 68.781 25.83 35.867 48.013 74 0 65 28 37 46 1 0 1 1 1 1 7295.8 8912 1878 8588 20801 23981 23981 1 HQGLPQEVLNENLLR Unmodified 1758.9377 0.9376811 653 CON__P02662 yes yes 0 0 0 0 5 0 1 60.949 60.949 3 0.00011693 21140 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.261 54.63 39.27 55.446 25.507 28.38 37.398 0 37 55 28 28 37 0 1 1 1 1 1 0 3653.6 + 8913 653 8589 20802 23982 23982 1 HQGVMVGMGQK Unmodified 1170.5638 0.5637828 1673;1781;1791;2366 P60710;E9Q5F4;G3UZ07;E9Q606;E9Q2D1;P63260;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 8.5 2.22 1 1 2 1 1 41.075 41.075 2;3;4 1.5586E-08 10654 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.18 89.738 1077.9 723.15 1451.7 611.7 580.38 1205.9 1014 768 1412 636 600 1146 4 4 5 4 3 4 316570 8914 1673;1781;1791;2366 8590 20803;20804;20805;20806;20807;20808 23983;23984;23985;23986;23987;23988 23984 6 HQGVMVGMGQK Oxidation (M) 1186.5587 0.55869743 1673;1781;1791;2366 P60710;E9Q5F4;G3UZ07;E9Q606;E9Q2D1;P63260;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 1 0 9.07 2.08 3 5 4 3 37.418 37.418 3 1.8409E-05 8499 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.38 79.295 1325 880.21 1108.6 1118.6 1327.6 1254.5 1245 892 1084 1094 1351 1204 18 15 14 18 17 14 115350 8915 1673;1781;1791;2366 8590 20809;20810;20811;20812;20813;20814;20815;20816;20817;20818;20819;20820;20821;20822;20823 23989;23990;23991;23992;23993;23994;23995;23996;23997;23998;23999;24000;24001;24002;24003;24004;24005;24006;24007;24008;24009;24010;24011;24012;24013;24014 23999 120;121 26 HQILEQAVEDYAETVHQLSK Unmodified 2337.1601 0.16008906 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.5 0.5 1 1 78.848 78.848 4 4.5694E-07 27910 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.855 46.036 344.29 296 481.46 357.16 394.16 367.45 324 306 473 353 398 353 4 5 5 5 5 5 14938 8916 2148 8591 20824;20825 24015;24016;24017;24018;24019;24020 24019 6 HQIVEVAGDDK Unmodified 1209.599 0.59896556 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 4.5 0.5 1 1 42.781 42.781 3 0.00059976 12395 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.46 49.606 49.121 0 98.294 46.791 58.576 49.036 46 0 93 46 56 46 1 0 2 1 1 1 8809.4 8917 2047 8592 20826;20827 24021;24022 24022 2 HQLEDQDTEIER Unmodified 1511.6852 0.68521439 297 D3Z685;A0A1L1SS23;D3Z6K8;P70392 Rasgrf2 Ras-specific guanine nucleotide-releasing factor 2 yes no 0 0 0 0 1 0 1 35.74 35.74 3 8.3752E-09 9240 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.02 92.768 0 0 0 30.604 0 39.442 0 0 0 28 0 37 0 0 0 1 0 1 28293 8918 297 8593 20828 24023 24023 1 HQLLEADISAHEDR Unmodified 1632.7856 0.78559713 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4.67 0.471 1 2 42.288 42.288 3;4 2.2673E-05 12159 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.337 63.084 107.77 144.65 159.79 75.39 248.31 161.34 102 144 158 74 246 158 3 2 2 2 3 3 24986 8919 551 8594 20829;20830;20831 24024;24025;24026 24025 3 HQPAASPVVVR Unmodified 1159.6462 0.64619053 3051 Q9D2P8 Mobp Myelin-associated oligodendrocyte basic protein yes yes 0 0 0 0 6 0.816 1 1 1 32.355 32.355 3 1.13E-08 6989 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.32 88.098 108.36 126.57 74.949 83.027 219.57 165.67 102 127 78 83 219 160 3 3 2 2 3 2 47240 8920 3051 8595 20832;20833;20834 24027;24028;24029 24028 3 HQPDFIYLR Unmodified 1187.6087 0.60874239 935;602;2570 B1AWV9;Q5DTL9;E9Q8N8;O88343;A7E1Z5;Q8JZR6 Slc4a10;Slc4a4;Slc4a8 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger;Electrogenic sodium bicarbonate cotransporter 1;Electroneutral sodium bicarbonate exchanger 1 no no 0 0 0 0 6 0 1 52.156 52.156 3 0.0010768 16314 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.358 49.436 29.83 0 35.998 87.223 71.784 46.988 28 0 37 83 74 46 1 0 1 1 1 1 5859 8921 602;935;2570 8596 20835 24030 24030 1 HQPGGGK Unmodified 679.34017 0.3401721 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 6.5 0.5 1 1 22.594 22.594 3 0.044518 3308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.966 36.19 44.501 76.293 30.277 71.813 95.694 71.889 42 75 32 69 97 70 2 2 1 2 2 2 6173.4 8922 572;46 8597 20836;20837 24031;24032 24031 2 HQPPPIR Unmodified 843.47152 0.47152062 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 9 4 1 1 24.819 24.819 3 0.0024245 4287 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.01 79.773 69.173 113.44 0 99.436 117.66 95.78 65 111 0 93 120 93 1 1 0 1 1 1 14288 8923 1850;2212 8598 20838;20839 24033;24034 24033 2 HQPTAIIAK Unmodified 977.56581 0.56581494 1537 P40142 Tkt Transketolase yes yes 0 0 0 0 13 0 1 39.701 39.701 3 0.0011133 11281 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.749 57.364 464.66 177.19 383.02 316.24 510.44 369.19 436 202 379 319 514 360 1 1 1 1 1 1 21008 8924 1537 8599 20840 24035 24035 1 HQSGGNFFEPTLLSNVTR Unmodified 2002.9861 0.98608786 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 64.774 64.774 3 2.8141E-07 21452 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.359 62.515 59.37 123.49 74.547 44.043 160.27 86.623 56 121 74 46 158 83 1 2 1 1 2 1 33977 8925 2469 8600 20841;20842 24036;24037 24036 2 HQSLGGQYGVQGFPTIK Unmodified 1815.9268 0.92678206 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 8 0 1 59.331 59.331 3 7.175E-06 18289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.654 70.816 0 29.792 0 0 47.137 28.503 0 28 0 0 46 28 0 1 0 0 1 1 2855.8 8926 1933 8601 20843 24038 24038 1 HQTLQGVAFPISR Unmodified 1452.7837 0.78374664 2776 Q91YR1 Twf1 Twinfilin-1 yes yes 0 0 0 0 11 0 1 52.22 52.22 3 0.027648 12513 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.746 11.578 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 5683 8927 2776 8602 20844 24039 24039 1 HQVLEQALADYAQTIK Unmodified 1826.9527 0.95266246 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 0 1 73.237 73.237 4 0.00060613 24757 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.565 32.901 49.179 0 30.048 0 76.454 27.666 46 0 28 0 74 28 1 0 1 0 1 1 5696.9 8928 2186 8603 20845 24040 24040 1 HQYYNQEWTLWDR Unmodified 1837.8172 0.81723161 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 60.848 60.848 3 1.9601E-05 19911 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.868 66.81 48.379 102.82 146.16 169.69 161.28 132.91 46 102 148 166 166 129 1 2 2 2 2 2 15346 8929 1876 8604 20846;20847;20848 24041;24042;24043 24042 3 HRDTGILDSIGR Unmodified 1338.7004 0.70041094 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 1 8 3.56 1 1 1 42.392 42.392 4 2.6615E-06 12216 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.24 74.039 167.54 89.003 79.504 156.89 102.62 38.375 157 93 83 149 102 37 2 1 1 2 2 1 35000 8930 991;1305 8605 20849;20850;20851 24044;24045;24046 24045 3 HREEAYENQR Unmodified 1330.6014 0.60142518 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 1 1 0 1 20.785 20.785 4 0.032738 3130 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.406 31.029 9.6018 0 9.276 9.2842 0 0 9 0 9 9 0 0 1 0 1 1 0 0 600.33 8931 2323 8606 20852 24047 24047 1 HREEEQLLVQR Unmodified 1435.7532 0.75317479 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 4 0 1 36.262 36.262 4 0.0017153 9808 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.574 44.989 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 3606 8932 1275 8607 20853 24048 24048 1 HRPDLIDFDK Unmodified 1254.6357 0.63568542 2148;893 Q3UGX2;E9Q397;P15508;Q62261;A0A0A0MQG2 Sptb;Sptbn1 Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 5.5 0.5 1 1 51.251 51.251 4 0.0013993 15770 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.744 35.76 225.62 268.7 264.84 274.06 279.95 284.1 213 271 272 270 289 274 2 2 2 2 2 2 23249 8933 893;2148 8608 20854;20855 24049;24050 24050 2 HRPELIDYGK Unmodified 1226.6408 0.6407708 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 42.446 42.446 4 0.0040685 12968 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.65 23.293 265.64 373.53 197.44 178.67 102.51 277.16 250 371 204 176 102 260 3 4 3 3 2 2 23065 8934 418 8609 20856;20857;20858;20859 24051;24052;24053;24054 24051 4 HSAEGNWIDEATK Unmodified 1456.6583 0.65827136 667 D3YTL1;Q05A62 Dnal1 Dynein light chain 1, axonemal yes no 0 0 0 0 4.5 0.5 1 1 49.682 49.682 3 0.0029497 16163 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.3 30.421 29.457 86.973 24.929 0 0 59.696 28 84 28 0 0 56 1 1 1 0 0 1 2187.7 8935 667 8610 20860;20861 24055;24056 24055 2 HSAEVAGYQDSIGQLESDLR Unmodified 2174.024 0.023989504 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 6.25 3.96 1 1 1 1 64.432 64.432 3 3.0464E-76 22866 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 185.55 156.21 179.52 61.917 81.694 146.59 111.1 86.941 168 65 84 139 112 84 5 2 3 3 3 2 110620 8936 1557 8611 20862;20863;20864;20865 24057;24058;24059;24060;24061;24062 24059 6 HSAILASPNPDEK Unmodified 1377.6888 0.6888432 1197 O35526;D6RFB9 Stx1a Syntaxin-1A yes no 0 0 0 0 7.75 3.11 1 1 1 1 42.778 42.778 3 2.8496E-11 12066 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.93 85.409 285.52 193.25 179.74 238.71 221.09 272.46 268 195 185 232 223 260 4 3 3 4 3 3 41061 8937 1197 8612 20866;20867;20868;20869 24063;24064;24065;24066 24064 4 HSEEGLGPVQVVAEIPDQPEALQPGPGITAAPVDSGPK Unmodified 3785.9112 0.91119816 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 77.507 77.507 5 2.5916E-06 28743 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.735 37.627 0 39.034 20.004 20.767 0 20.254 0 37 19 19 0 19 0 2 1 1 0 1 10504 8938 817 8613 20870;20871 24067;24068 24068 2 HSETFTR Unmodified 876.40898 0.40897995 1269 O88543;F6YCA7 Cops3 COP9 signalosome complex subunit 3 yes no 0 0 0 0 4.5 0.5 1 1 23.184 23.184 3 0.051134 3643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.787 31.401 9.5161 24.454 7.202 29.65 27.926 0 9 24 9 28 28 0 1 2 1 1 1 0 7079.2 8939 1269 8614 20872;20873 24069;24070 24070 2 HSFCEVLK Unmodified 1018.4906 0.49060109 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 7 1 1 1 48.154 48.154 3 0.006823 12893 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.825 39.84 166.95 72.065 192.12 64.746 199.95 0 157 74 185 65 194 0 2 1 2 1 2 0 12317 8940 2736 8615 20874;20875 24071;24072 24072 2 HSGDYFTLLR Unmodified 1207.5986 0.59857163 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 7 0 1 56.579 56.579 3 0.0053081 17593 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.836 31.791 39.414 56.926 0 0 38.702 0 37 56 0 0 37 0 1 1 0 0 1 0 2764.8 8941 1813 8616 20876 24073 24073 1 HSGNITFDEIVNIAR Unmodified 1684.8533 0.85328277 1527 P35979 Rpl12 60S ribosomal protein L12 yes yes 0 0 0 0 6 0 1 67.317 67.317 3 0.00089588 23443 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.148 16.596 69.099 53.872 62.943 85.452 80.592 66.99 65 56 65 83 83 65 1 1 1 1 1 1 6615.2 8942 1527 8617 20877 24074 24074 1 HSGQDVHVVLK Unmodified 1217.6517 0.65166983 3000 Q9CZ44 Nsfl1c NSFL1 cofactor p47 yes yes 0 0 0 0 6 0 1 38.624 38.624 4 0.00050131 10016 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.332 46.984 0 69.16 0 59.118 111.12 66.119 0 65 0 56 111 65 0 1 0 1 1 1 4408.3 8943 3000 8618 20878 24075 24075 1 HSGYLWTIGK Unmodified 1160.5978 0.59784335 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 10.5 0.5 1 1 57.901 57.901 3 0.0020256 15252 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.056 36.969 127.29 217.21 113.88 131.68 260.68 152.27 120 214 120 130 260 148 1 2 1 1 2 1 25527 8944 2301;365 8619 20879;20880 24076;24077 24076 2 HSIEVPIPR Unmodified 1046.5873 0.58727866 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 8 3.56 1 1 1 46.661 46.661 3 0.00033151 13782 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.139 40.221 267.86 314.18 304.96 354.45 372.8 305.48 252 315 304 346 382 293 3 4 3 4 5 2 47760 8945 1362 8620 20881;20882;20883 24078;24079;24080;24081;24082 24080 5 HSIGDTK Unmodified 756.37662 0.37661719 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 29.221 29.221 3 0.0050615 6123 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.19 58.536 323.47 463.85 607.91 435.62 307.94 563.65 305 466 607 437 325 537 3 4 4 4 3 4 44208 8946 789 8621 20884;20885;20886;20887 24083;24084;24085;24086 24086 4 HSLDASQGTATGPR Unmodified 1396.6695 0.66950474 2423 Q8BKZ9;A2AWH8;A2AWH7 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 0 0 0 5 0.816 1 1 1 29.342 29.342 3 1.3589E-31 6156 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 164.53 141.65 69.449 46.896 27.205 49.216 67.061 0 65 47 28 47 65 0 2 2 1 2 2 0 13593 8947 2423 8622 20888;20889;20890 24087;24088;24089 24088 3 HSLSPEQDIK Unmodified 1152.5775 0.57750184 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 5 0 1 41.445 41.445 3 0.017353 11876 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.284 32.06 0 86.717 95.423 0 0 59.696 0 83 93 0 0 56 0 1 1 0 0 1 2760.3 8948 3305 8623 20891 24090 24090 1 HSPQEAPHVQYER Unmodified 1576.7383 0.73825301 494 A2AMR7;O88507 Cntfr Ciliary neurotrophic factor receptor subunit alpha yes no 0 0 0 0 3 0 1 29.617 29.617 4 0.0013638 7234 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.32 43.119 0 48.022 55.13 57.922 0 88.478 0 46 56 56 0 83 0 1 1 1 0 1 3768 8949 494 8624 20892 24091 24091 1 HSPTEDDESAK Unmodified 1214.5051 0.50512476 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 2.5 0.5 1 1 28.783 28.783 3 3.2989E-11 6566 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 141.71 101.79 45.02 42.376 53.193 55.074 96.508 91.054 42 41 51 51 97 88 2 2 1 2 2 2 10687 8950 1382 8625 20893;20894 24092;24093;24094 24092 3 HSPTEDDESAKAEADVHLK Unmodified 2077.9552 0.95524124 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 4 0 1 45.503 45.503 5 0.061633 14181 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 29.126 6.2515 0 0 0 49.46 43.507 68.049 0 0 0 46 46 65 0 0 0 1 1 1 4040.3 8951 1382 8626 20895 24095 24095 1 HSQFIGYPITLFVEK Unmodified 1777.9403 0.94030686 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10.7 1.41 2 3 2 2 79.036 79.036 2;3;4 8.2428E-08 24734 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.11 86.077 859.77 915.19 898.42 584.88 646.1 553.71 808 925 890 576 645 528 9 11 9 7 6 8 231840 8952 1322 8627 20896;20897;20898;20899;20900;20901;20902;20903;20904 24096;24097;24098;24099;24100;24101;24102;24103;24104;24105;24106;24107;24108;24109 24100 14 HSQFIGYPITLYLEK Unmodified 1807.9509 0.95087155 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 10.3 1.83 1 2 2 2 76.663 76.663 3;4 2.7387E-12 25863 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.43 103.77 591.32 445.47 595.42 721.07 743.04 398.88 556 455 594 704 742 381 8 6 6 9 7 6 161690 8953 1354 8628 20905;20906;20907;20908;20909;20910;20911 24110;24111;24112;24113;24114;24115;24116;24117;24118;24119 24114 10 HSQGINWYHWK Unmodified 1454.6844 0.68436695 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 11 2 1 1 51.322 51.322 4 0.0040223 16604 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.452 32.216 88.11 196.13 259.97 205.19 121.56 118.33 83 194 260 204 121 111 1 2 2 2 1 1 20973 8954 2479 8629 20912;20913 24120;24121 24121 2 HSSLAGCQIINYR Unmodified 1517.7409 0.74089555 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.5 2.29 1 1 1 1 1 1 1 1 45.297 45.297 2;3 1.0583E-24 11716 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 170.04 142.56 290.56 244.76 377.75 168.73 451.47 495.6 273 246 361 166 454 477 4 5 4 2 5 6 101700 8955 2185 8630 20914;20915;20916;20917;20918;20919;20920;20921 24122;24123;24124;24125;24126;24127;24128;24129 24124 8 HSSLSSSAKPER Unmodified 1284.6422 0.64222736 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 6 0 1 27.475 27.475 4 0.014518 4944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.115 27.055 0 0 0 39.506 49.713 52.947 0 0 0 37 51 51 0 0 0 1 1 1 2284.7 8956 3449;3451 8631 20922 24130 24130 1 HSSSYNQGR Deamidation (N) 1035.437 0.43698561 362 Q8BGN8;A0A286YDB6 Synpr Synaptoporin yes no 0 1 0 0 3.5 0.5 1 1 16.334 16.334 3 3.7813E-06 2417 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 155.42 134.42 5.3337 3.0685 12.645 2.8774 13.793 20.926 5 3 12 3 14 20 1 1 2 1 2 2 2210.9 8957 362 8632 20923;20924 24131;24132 24131 97 2 HTAAPTDPTDGP Unmodified 1178.5204 0.52038089 3314 Q9R1Q7 Plp2 Proteolipid protein 2 yes yes 0 0 0 0 2.5 0.5 1 1 34.572 34.572 2 6.0349E-15 9247 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 141.2 133.26 20.292 18.848 0 9 19.197 19.706 19 19 0 9 19 19 1 1 0 1 1 1 5604.2 8958 3314 8633 20925;20926 24133;24134 24133 2 HTDPVPDPR Unmodified 1032.4989 0.49885759 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 3.5 0.5 1 1 30.716 30.716 3 0.0040101 7159 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.654 37.4 59.671 0 70.029 0 0 123.04 56 0 65 0 0 120 1 0 1 0 0 2 16739 8959 1242 8634 20927;20928 24135;24136 24136 2 HTEAAAAQR Unmodified 953.46789 0.46789181 2079 Q60668 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 16.082 16.082 3 9.0173E-09 2377 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 163.15 138.69 32.925 39.818 31.209 21.77 37.122 43.856 31 40 31 21 37 42 4 6 3 5 4 5 40247 8960 2079 8635 20929;20930;20931;20932;20933 24137;24138;24139;24140;24141;24142;24143 24138 7 HTEPNETTPLTEPEKGPVETK Unmodified 2333.1387 0.13868491 71;949 A0A0A6YY47;E9QB01 Ncam1 no no 0 0 0 1 4 0.816 1 1 1 47.361 47.361 4 5.4119E-07 14934 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.726 56.45 167.63 53.597 94.962 93.928 109.58 134.39 157 56 92 93 112 129 3 1 2 2 2 3 17861 8961 71;949 8636 20934;20935;20936 24144;24145;24146 24145 3 HTFEEAEK Unmodified 989.44543 0.44542503 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 4 0 1 36.552 36.552 3 0.0059167 9871 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.23 21.757 0 59.584 0 40.441 0 0 0 56 0 37 0 0 0 1 0 1 0 0 2815.1 8962 3243 8637 20937 24147 24147 1 HTGPGILSMANAGPNTNGSQFFICTAK Oxidation (M);Deamidation (N) 2807.3007 0.30069841 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 1 1 0 7 0 1 68.242 68.242 4 3.6076E-05 23131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.286 34.966 39.385 16.911 38.821 0 0 0 37 19 37 0 0 0 1 1 1 0 0 0 2452 8963 1404 8638 20938 24148 24148 501;502;503 95 1 HTGPGILSMANAGPNTNGSQFFICTAK Deamidation (N) 2791.3058 0.30578379 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 1 0 0 8.6 2.24 2 2 1 73.686 73.686 3;4 4.3462E-20 25834 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.297 67.976 118.05 91.501 125.32 45.757 54.844 57.065 112 93 121 46 56 55 3 2 3 1 1 2 81877 8964 1404 8638 20939;20940;20941;20942;20943 24149;24150;24151;24152;24153 24149 501;502;503 5 HTGPGILSMANAGPNTNGSQFFICTAK 2 Deamidation (N) 2792.2898 0.28979937 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 2 0 0 8 0 1 73.926 73.926 3 7.5175E-22 25123 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.387 87.646 39.701 0 0 29.743 45.769 28.542 37 0 0 28 46 28 1 0 0 1 1 1 10164 8965 1404 8638 20944 24154 24154 501;502;503 1 HTGPGILSMANAGPNTNGSQFFICTAK Unmodified 2790.3218 0.3217682 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 9 0 1 73.829 73.829 3 2.0253E-30 24437 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.618 77.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8966 1404 8638 20945 24155 24155 1 HTGPNSPDTANDGFVR Deamidation (N) 1684.7441 0.74412625 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 1 0 0 3 0 1 38.202 38.202 3 0.0020805 11204 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.782 42.994 20.16 0 38.184 39.258 0 0 19 0 37 38 0 0 1 0 1 1 0 0 2726.9 8967 1209;1808 8639 20946 24156 24156 331 1 HTLAANFNPVSEER Unmodified 1583.7692 0.76921879 1448 P24668 M6pr Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 0 6 0 1 47.602 47.602 3 0.00089321 14162 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.641 39.768 39.357 0 57.857 56.942 43.493 58.455 37 0 56 56 46 56 1 0 1 1 1 1 4457.9 8968 1448 8640 20947 24157 24157 1 HTLGHGDES Unmodified 951.40462 0.40462285 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 0 5.75 4.21 2 1 1 19.513 19.513 2;3 0.001762 2679 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.679 69.032 44.944 22.812 9.2218 9.2874 14.644 14.924 42 23 9 9 14 14 2 2 1 1 1 1 17543 8969 1335 8641 20948;20949;20950;20951 24158;24159;24160;24161 24160 4 HTNFVEFR Unmodified 1048.509 0.50902834 1732 P62743 Ap2s1 AP-2 complex subunit sigma yes yes 0 0 0 0 7 0.816 1 1 1 43.214 43.214 3 0.00044855 11356 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.86 73.488 197.91 109.48 188.05 102.24 230.38 190.64 186 111 185 102 231 185 2 1 2 1 2 2 32014 8970 1732 8642 20952;20953;20954 24162;24163;24164 24163 3 HTPEAGGSGQR Unmodified 1095.5057 0.50573388 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 3 0.816 1 1 1 17.01 17.01 3 1.3478E-10 2393 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.49 97.467 0 18.998 9.2366 0 21.429 15.647 0 18 9 0 21 15 0 3 1 0 3 2 7078.9 8971 692 8643 20955;20956;20957 24165;24166;24167 24167 3 HTPGSPSGK Unmodified 866.42463 0.42463001 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6.5 0.5 1 1 26.314 26.314 3 0.0014758 4509 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.516 54.181 44.497 35.269 95.423 64.255 58.62 52.693 42 37 93 65 60 51 1 1 2 2 1 1 4723.3 8972 3449;3451 8644 20958;20959 24168;24169 24168 2 HTPVLELEGK Unmodified 1121.6081 0.60807369 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 6 0.816 1 1 1 51.336 51.336 3 3.217E-05 15031 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.788 49.181 216.27 192.49 278.3 221.19 317.22 228.67 204 194 278 223 318 223 3 2 3 3 2 2 24542 8973 2996 8645 20960;20961;20962 24170;24171;24172 24172 3 HTPVSPSSK Unmodified 938.48214 0.48214489 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 30.425 30.425 3 0.024099 6175 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.706 20.402 0 39.02 20.836 38.352 45.044 38.157 0 37 23 37 46 37 0 1 1 1 1 1 2744.7 8974 3449;3451 8646 20963 24173 24173 1 HTQAELQR Unmodified 981.49919 0.49919194 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 3 0 1 21.988 21.988 3 0.047953 3776 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.734 21.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1126.4 8975 2123 8647 20964 24174 24174 1 HTQALNR Unmodified 838.44095 0.44094878 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 6 0 1 18.869 18.869 3 0.031422 2658 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.281 26.669 11.781 0 3.7501 11.639 8.5583 9.3498 11 0 4 11 9 9 1 0 1 1 1 1 1187 8976 2424 8648 20965 24175 24175 1 HTQGAQPGLADQAAK Unmodified 1491.743 0.74300404 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 9.5 3.5 1 1 35.076 35.076 3 4.7933E-26 8720 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.06 105.8 20.387 0 0 39.57 46.298 0 19 0 0 37 46 0 1 0 0 1 1 0 1972.8 8977 573 8649 20966;20967 24176;24177 24177 2 HTSETADALCPR Unmodified 1356.6092 0.60921267 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 4 0 1 32.763 32.763 3 9.4444E-05 8131 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.999 66.587 0 29.152 38.285 0 0 49.036 0 28 37 0 0 46 0 1 1 0 0 1 2861.3 8978 2413 8650 20968 24178 24178 1 HTSSSGAAEGASCSER Unmodified 1592.6485 0.6485113 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 2 0 1 18.995 18.995 3 3.2193E-05 2966 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.134 60.622 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 448.47 8979 1999 8651 20969 24179 24179 1 HTTDLDASK Unmodified 986.46689 0.46688876 1490 P30275;A2ARP5;B0R0E9;B0R0F0 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 5 0.816 1 1 1 33.842 33.842 3 0.00077536 8128 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.392 46.391 216.61 283.44 438.17 323.39 246.07 338.36 204 287 435 324 253 324 2 3 3 3 2 3 55613 8980 1490 8652 20970;20971;20972 24180;24181;24182 24181 3 HTVDDGLDIR Unmodified 1139.5571 0.55710075 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 3 0.816 1 1 1 41.866 41.866 3 5.5676E-12 12718 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 163.43 124.41 112.04 56.931 74.33 42.625 107.44 43.079 107 60 74 42 106 42 3 2 2 1 2 1 51290 8981 2264 8653 20973;20974;20975 24183;24184;24185 24183 3 HTVDIEEK Unmodified 969.47673 0.47672516 410;3398 A0A338P6R8;A0A338P769;A0A338P755;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 6.5 3.91 1 1 1 1 38.514 38.514 3 0.00023585 11509 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.75 88.191 673.6 650.1 211.26 649.57 801.8 564.76 632 657 212 617 812 546 5 5 3 4 4 3 155160 8982 410;3398 8654 20976;20977;20978;20979 24186;24187;24188;24189;24190 24186 5 HTVIAAQSLEALSGLQK Unmodified 1764.9734 0.9733979 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 9 0 1 67.222 67.222 3 0.01324 21321 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.996 18.89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8983 573 8655 20980 24191 24191 1 HVAEVLEYTKDEQLESLFQR Unmodified 2433.2176 0.21760393 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 1 6 0 1 76.565 76.565 4 1.9588E-05 27862 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.304 43.641 69.745 0 0 0 46.807 38.106 65 0 0 0 46 37 1 0 0 0 1 1 4628 8984 2269 8656 20981 24192 24192 1 HVDCSGR Unmodified 829.35008 0.35008486 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 8 5 1 1 17.042 17.042 3 0.016108 2785 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.787 13.283 28.801 30.194 2.9976 5.2141 42.746 27.562 27 30 3 5 42 27 2 1 1 1 2 2 1880.8 8985 1093 8657 20982;20983 24193;24194 24194 2 HVEDGNVTVQHAALSALR Unmodified 1915.9864 0.98642221 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 5 0 1 48.115 48.115 4 1.3619E-06 15046 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.075 54.856 158.74 51.672 147.21 202.59 94.297 69.29 149 56 148 195 93 65 2 1 2 2 1 1 12808 8986 919;937 8658 20984 24195;24196 24195 2 HVEPGNAAIQEK Unmodified 1291.6521 0.65206377 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 38.68 38.68 3 3.4644E-06 10420 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.39 48.063 79.182 43.605 70.33 0 200.29 76.75 74 46 65 0 194 74 1 1 1 0 2 1 24302 8987 158 8659 20985;20986 24197;24198 24198 2 HVEQVLQR Unmodified 1007.5512 0.55122751 2234 Q6PB44;A0A0G2JEW5 Ptpn23 Tyrosine-protein phosphatase non-receptor type 23 yes no 0 0 0 0 5.5 0.5 1 1 34.918 34.918 3 0.0095062 8228 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.265 39.342 39.701 0 0 30.604 0 29.848 37 0 0 28 0 28 1 0 0 1 0 1 1371.7 8988 2234 8660 20987;20988 24199;24200 24200 2 HVESIGDPEHISR Unmodified 1474.7165 0.71645494 1628 P55302;F6WMD1 Lrpap1 Alpha-2-macroglobulin receptor-associated protein yes no 0 0 0 0 4 0 1 37.143 37.143 4 0.0021026 10144 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.377 44.479 0 29.152 38.285 0 0 0 0 28 37 0 0 0 0 1 1 0 0 0 1528.5 8989 1628 8661 20989 24201 24201 1 HVFALFNTEQR Unmodified 1360.6888 0.68878362 960 E9QLL2;Q8BZ98;F2Z460;E0CXZ8 Dnm3 Dynamin-3 yes no 0 0 0 0 10 0 2 57.136 57.136 3 1.3475E-13 14897 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.11 0 59.326 73.639 65.613 80.046 44.439 69.29 56 74 65 74 46 65 1 1 1 1 1 1 20678 8990 960 8662 20990;20991 24202;24203 24203 2 HVFGESDELIGQK Unmodified 1457.7151 0.71505795 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 6.43 2.82 1 3 1 1 1 55.77 55.77 2;3;4 2.6387E-13 18875 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.03 88.186 541.76 137.91 442.19 827.38 595.71 697.23 508 140 441 791 618 668 6 3 4 6 6 5 134440 8991 1405 8663 20992;20993;20994;20995;20996;20997;20998 24204;24205;24206;24207;24208;24209;24210;24211 24206 8 HVFGQAVK Unmodified 884.48684 0.48683634 3336 Q9WUM4;E9PX03;E9PZJ0;E9PVJ1 Coro1c Coronin-1C;Coronin yes no 0 0 0 0 9.5 0.5 1 1 40.872 40.872 2;3 0.0020696 9176 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.033 65.661 296.18 218.89 364.47 306.9 368.39 436.68 279 230 363 307 380 419 1 1 2 2 2 1 34992 8992 3336 8664 20999;21000 24212;24213 24212 2 HVFGQPAK Unmodified 882.47119 0.47118627 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57;G3UX53;D3YXM2 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 10 1.87 1 1 1 1 37.796 37.796 3 0.0032791 8261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.297 51.487 988.98 716.51 1056.2 723.64 740.09 894.58 930 729 1043 713 755 859 7 7 6 5 4 7 118880 8993 1289 8665 21001;21002;21003;21004 24214;24215;24216;24217;24218;24219;24220;24221 24214 8 HVFGQPVK Unmodified 910.50249 0.5024864 3335 Q9WUM3;D3YUG6 Coro1b Coronin-1B;Coronin yes no 0 0 0 0 9.5 0.5 1 1 41.538 41.538 3 0.007262 8363 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.915 38.345 326.47 192.51 151.2 100.34 69.825 86.486 306 204 148 93 74 83 2 2 1 1 1 1 32691 8994 3335 8666 21005;21006 24222;24223 24223 2 HVGDLGNVTAGK Unmodified 1166.6044 0.60438529 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 9.29 3.33 1 1 1 1 3 45.726 45.726 2;3;4 9.8763E-05 12665 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.718 62.586 1052.8 411.82 1263.3 819.08 1080.9 1047.9 989 417 1229 815 1075 1004 6 3 7 6 6 5 380540 8995 1326 8667 21007;21008;21009;21010;21011;21012;21013 24224;24225;24226;24227;24228;24229;24230 24226 7 HVGDLGNVTAGK Deamidation (N) 1167.5884 0.58840088 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 1 0 0 5 0 1 48.768 48.768 3 0.0018375 15387 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.55 37.452 0 38.782 35.074 59.118 0 0 0 37 37 56 0 0 0 1 1 1 0 0 1767.2 8996 1326 8667 21014 24231 24231 397 1 HVGMAVAGLLADAR Unmodified 1379.7344 0.73435361 1253 O70435 Psma3 Proteasome subunit alpha type-3 yes yes 0 0 0 0 9.5 0.5 1 1 62.668 62.668 3 2.8547E-05 17209 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.38 66.625 177.09 154.42 41.362 176.59 184.67 113.06 166 157 46 167 185 111 2 2 1 2 1 1 22141 8997 1253 8668 21015;21016 24232;24233 24233 2 HVINFDLPSDIEEYVHR Unmodified 2082.0171 0.017053633 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 5.5 0.5 1 1 72.766 72.766 4 3.9665E-06 26669 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.781 55.382 29.629 36.588 46.785 36.601 55.896 29.077 28 37 46 37 56 28 1 2 1 2 2 1 9437.3 8998 2146 8669 21017;21018 24234;24235 24234 2 HVINMCLNVIK Unmodified 1339.7104 0.71044704 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7;B1ATU4 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 11 0 1 60.142 60.142 3 0.0056792 15739 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.259 30.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8999 1066 8670 21019 24236 24236 1 HVISYSLSPFEQR Unmodified 1561.7889 0.7888916 2913 Q9CQ69 Uqcrq Cytochrome b-c1 complex subunit 8 yes yes 0 0 0 0 9.33 1.25 1 1 1 57.853 57.853 3 4.7493E-14 14608 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.57 106.49 216.89 102.22 250.31 72.449 366.86 246.44 204 102 241 74 362 241 2 1 2 1 2 2 63508 9000 2913 8671 21020;21021;21022 24237;24238;24239 24239 3 HVIYILK Unmodified 884.54837 0.54837396 2603 Q8K341;B8JJ72 Atat1 Alpha-tubulin N-acetyltransferase 1 yes no 0 0 0 0 10 0 1 54.896 54.896 3 0.035969 13639 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.765 31.693 0 0 40.034 0 65.675 67.416 0 0 37 0 65 65 0 0 1 0 1 1 2055.3 9001 2603 8672 21023 24240 24240 1 HVLAAWALGAK Unmodified 1135.6502 0.65021327 2171 Q64237 Dbh Dopamine beta-hydroxylase;Soluble dopamine beta-hydroxylase yes yes 0 0 0 0 1 0 1 63.067 63.067 3 0.0013026 21150 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.216 36.614 49.176 36.052 0 50.278 0 0 46 37 0 46 0 0 1 1 0 1 0 0 1478.7 9002 2171 8673 21024 24241 24241 1 HVLDTLIQLAK Unmodified 1249.7394 0.73942221 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 11 0 1 78.737 78.737 3 0.0024769 23992 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.426 32.328 39.701 0 0 0 0 49.036 37 0 0 0 0 46 1 0 0 0 0 1 4935.5 9003 459 8674 21025 24242 24242 1 HVLFEDTFFDK Unmodified 1396.6663 0.66631685 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 8.5 2.69 1 1 1 1 72.024 72.024 3 9.0458E-11 26621 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.76 96.762 237.45 206.21 284.29 284.44 131.33 351.23 223 204 287 278 139 333 3 3 4 4 2 3 85559 9004 2370 8675 21026;21027;21028;21029 24243;24244;24245;24246 24246 4 HVLFPLK Unmodified 852.52216 0.52215921 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 11.5 0.5 1 1 57.664 57.664 3 0.0097742 13303 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.592 24.904 128.24 106.49 177.66 128.78 293.6 124.86 121 111 176 130 297 121 1 1 1 1 2 1 43016 9005 432 8676 21030;21031 24247;24248 24248 2 HVLNVLNK Unmodified 935.55525 0.55525025 1604 Q3UEE2;P51855;A2AQN7;A2AQN9 Gss Glutathione synthetase yes no 0 0 0 0 10 0 1 50.405 50.405 3 0.023118 11823 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.995 33.215 186.93 131.77 210.86 217.13 223.31 151.4 176 139 212 214 228 148 1 1 1 1 1 1 8061.8 9006 1604 8677 21032 24249 24249 1 HVLSGTLGIPEHTYR Unmodified 1678.8791 0.87910359 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 0 0 0 9 1.29 1 1 2 1 1 48.146 48.146 3;4 2.8512E-42 12177 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 183.96 169.09 382.89 406.34 713.18 442.44 369.98 382.16 361 411 706 427 366 361 5 5 6 5 5 3 228320 9007 309 8678 21033;21034;21035;21036;21037;21038 24250;24251;24252;24253;24254;24255;24256;24257 24255 8 HVLSTFGPVPEFSGATVER Unmodified 2029.0269 0.026890038 2846 Q99KP3 Cryl1 Lambda-crystallin homolog yes yes 0 0 0 0 7 0 1 66.036 66.036 3 2.5792E-05 22107 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.585 41.489 19.842 67.243 34.651 28.037 26.672 38.681 19 65 37 28 28 37 1 1 1 1 1 1 2851.4 9008 2846 8679 21039 24258 24258 1 HVLTGSADNSCR Unmodified 1315.5939 0.59389696 3290 Q9QZD9;A2AE03 Eif3i Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 0 5.5 0.5 1 1 28.211 28.211 3 0.0012268 5200 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.731 52.878 0 9.576 0 19.674 0 29.848 0 9 0 18 0 28 0 1 0 2 0 1 1815.5 9009 3290 8680 21040;21041 24259;24260 24260 2 HVLVILTDMSSYAEALR Unmodified 1917.003 0.002983473 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 11.5 1.12 1 1 1 1 86.702 86.702 3 2.8521E-25 27506 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 137.19 124.07 132.11 101.09 244.83 56.776 136.91 207.23 124 103 232 55 135 198 4 4 5 3 4 6 49011 9010 1741 8681 21042;21043;21044;21045 24261;24262;24263;24264;24265;24266;24267;24268;24269;24270 24265 10 HVLVTLGEK Unmodified 994.58113 0.58113065 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5 Myl6 Myosin light polypeptide 6 yes no 0 0 0 0 10 1.87 1 1 1 1 50.551 50.551 3 0.00035001 14284 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.033 76.526 417.23 302.88 311.8 342.22 226.42 415.68 392 316 321 334 235 396 4 4 4 4 3 4 79465 9011 316 8682 21046;21047;21048;21049 24271;24272;24273;24274 24271 4 HVMDVVDEELSK Unmodified 1399.6653 0.66533057 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 4 0 1 65.409 65.409 3 0.0047974 23332 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.218 34.445 29.904 27.776 0 30.604 0 0 28 28 0 28 0 0 1 1 0 1 0 0 2262.8 9012 2539 8683 21050 24275 24275 1 HVPGGGSVQIVYKPVDLSK Unmodified 1979.084 0.084010986 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 1 10 1.63 1 2 1 1 1 59.257 59.257 3;4 8.7013E-12 18503 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.98 96.942 521.72 633.77 718.23 334.29 722.98 601.28 491 640 709 334 724 577 4 6 5 2 4 4 157760 9013 572;46 8684 21051;21052;21053;21054;21055;21056 24276;24277;24278;24279;24280;24281 24276 6 HVPGPGKPVLSK Unmodified 1214.7135 0.71354181 152 Q8CCJ4;A0A0R4J030;A0A286YD03 Amer2 APC membrane recruitment protein 2 yes no 0 0 0 1 10 0 1 44.666 44.666 4 0.014972 9654 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.915 30.479 99.324 92.255 0 0 190.7 142.73 93 93 0 0 187 139 1 1 0 0 1 1 4698.7 9014 152 8685 21057 24282 24282 1 HVPSPLNLEEVQK Unmodified 1488.7936 0.79364262 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 0 7 0 1 58.158 58.158 3 3.6133E-09 18387 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.99 70.945 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9015 2691 8686 21058 24283 24283 1 HVPVVYVDYPGPASLTQIYGTFNR Unmodified 2692.3649 0.36493687 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 80.952 80.952 4 1.5349E-10 27802 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.291 60.67 0 38.901 27.962 19.682 57.672 59.696 0 37 28 19 56 56 0 1 1 1 1 1 7763.9 9016 3204 8687 21059 24284;24285 24285 2 HVQGILR Unmodified 821.48717 0.48717069 1720 P62309 Snrpg Small nuclear ribonucleoprotein G yes yes 0 0 0 0 7.5 0.5 1 1 34.715 34.715 3 0.014537 6860 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.268 32.03 78.984 152.15 0 150.41 80.542 165.06 74 148 0 139 83 157 1 2 0 2 1 2 15100 9017 1720 8688 21060;21061 24286;24287 24287 2 HVQLLGR Unmodified 821.48717 0.48717069 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 13 0 1 37.856 37.856 3 0.049094 10399 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.966 23.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9018 2282;2057 8689 21062 24288 24288 1 HVQSMYEEAYSDYLK Unmodified 1861.8193 0.81926503 86 A0A0G2JDX4;A0A0G2JEZ7;Q9D1X8;Q922J6 Tspan2 Tetraspanin;Tetraspanin-2 yes no 0 0 0 0 5.5 0.5 1 1 62.646 62.646 3 2.6079E-08 21285 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.006 72.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9019 86 8690 21063;21064 24289;24290 24290 2 HVSDDMK Unmodified 830.35925 0.35925256 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 4.5 0.5 1 1 33.3 33.3 3 0.0053135 8389 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.777 67.22 108.31 89.74 182 56.168 150.29 86.965 102 93 176 56 149 83 1 1 2 1 2 1 9251.3 9020 1536 8691 21065;21066 24291;24292 24291 2 HVSPAGAAVGVPLSEDEAR Unmodified 1860.933 0.93298965 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 5 0 1 49.136 49.136 3 1.5087E-05 15651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.94 51.467 20.387 0 0 0 28.62 19.437 19 0 0 0 28 19 1 0 0 0 1 1 3442.5 9021 2977 8692 21067 24293 24293 1 HVSSEEMMR Unmodified 1104.4692 0.46921372 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 0 4 0 1 31.818 31.818 3 0.0040101 7745 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.654 58.619 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2883.4 9022 450 8693 21068 24294 24294 1 HVVFGHVK Unmodified 921.51847 0.51847082 2849 Q99KR7 Ppif Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 0 0 0 10 0 1 38.232 38.232 3 0.0038406 7129 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.496 50.098 39.468 46.283 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 0 4212.4 9023 2849 8694 21069 24295 24295 1 HVVFGQVIK Unmodified 1025.6022 0.60220045 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 11 2 1 1 52.141 52.141 3 0.0013266 17321 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.474 48.91 98.565 90.143 129.39 120.53 155.12 134.15 93 93 130 120 158 130 1 1 1 1 1 1 9658.3 9024 2952 8695 21070;21071 24296;24297 24297 2 HVVFIAQR Unmodified 968.55558 0.55558461 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 11.3 1.25 1 1 1 40.966 40.966 3 0.001464 8320 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 88.615 63.976 117.32 43.381 39.57 92.922 43.442 60 115 42 37 92 42 1 2 1 1 2 1 21287 9025 996 8696 21072;21073;21074 24298;24299;24300 24298 3 HWDQNER Unmodified 983.42094 0.42094162 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 5 0 1 26.661 26.661 3 0.02489 4908 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.895 31.228 30.044 0 0 0 28.291 29.041 28 0 0 0 28 28 1 0 0 0 1 1 2484.9 9026 1348 8697 21075 24301 24301 1 HWEAELATLK Unmodified 1196.619 0.61897272 3402 Q9Z2Y3;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 13 0 1 61.526 61.526 3 0.0017629 21908 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.726 38.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9027 3402 8698 21076 24302 24302 1 HWFSSLQPSR Unmodified 1243.6098 0.60980502 2670 Q8R570;B2FDF6;I7HFU4;I7HPB1;J3JS29 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 11 0 1 51.538 51.538 3 0.00019311 12228 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.325 60.378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10897 9028 2670 8699 21077 24303 24303 1 HWLDSPWPGFFNVDGEPK Unmodified 2126.985 0.98502522 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 8.5 0.5 1 1 85.053 85.053 3 0.010317 29490 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.417 23.723 20.134 28.121 38.454 19.594 0 0 19 28 38 19 0 0 1 1 2 1 0 0 4822.1 9029 628 8700 21078;21079 24304;24305 24305 2 HWLDSPWPGFFTLDGQPR Unmodified 2155.0276 0.02755874 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 11 2 1 1 86.372 86.372 3 0.00043754 33755 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.604 28.129 0 38.25 66.888 25.759 45.623 38.14 0 37 65 28 46 37 0 1 1 1 1 1 9467.6 9030 2074 8701 21080;21081 24306;24307 24307 2 HWLNQNLPISSGK Unmodified 1492.7787 0.77866126 2826 Q99J99;A0A2R8VHT1 Mpst 3-mercaptopyruvate sulfurtransferase yes no 0 0 0 0 10 0 1 57.864 57.864 3 7.4048E-05 15032 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.623 69.772 78.812 53.367 54.016 66.825 53.179 67.773 74 56 56 65 56 65 1 1 1 1 1 1 8896.1 9031 2826 8702 21082 24308 24308 1 HWPFMVVNDAGRPK Deamidation (N) 1653.8086 0.80858118 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 1 0 1 9 0.816 1 1 1 61.07 61.07 4 0.00020064 16436 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.34 49.136 225.91 292.88 408.86 281.44 419.01 336.63 213 296 404 287 424 327 3 4 3 3 3 3 31178 9032 1762 8703 21083;21084;21085 24309;24310;24311;24312 24312 691 4 HWPFMVVNDAGRPK Unmodified 1652.8246 0.8245656 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 10.8 1.48 1 1 1 1 57.818 57.818 4 5.8606E-22 15299 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.13 118.55 620.69 978.58 1333.8 554.04 840.47 1599.2 584 985 1281 537 857 1520 3 6 3 3 4 4 302550 9033 1762 8703 21086;21087;21088;21089 24313;24314;24315;24316;24317;24318 24315 6 HWPFQVVNDGDKPK Unmodified 1665.8263 0.82633974 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 1 9 0 1 57.448 57.448 4 0.034939 16704 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.73 24.309 0 88.312 0 0 103.76 85.517 0 83 0 0 102 83 0 1 0 0 1 1 9805 9034 1407 8704 21090 24319 24319 1 HWSDMLANPR Unmodified 1225.5662 0.56622565 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 0 0 0 7 0 1 51.895 51.895 3 0.0013922 15372 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.977 30.388 0 0 118.62 33.372 0 59.696 0 0 111 37 0 56 0 0 1 1 0 1 10681 9035 223;1553 8705 21091 24320 24320 1 HWYECLK Unmodified 1034.4644 0.46438634 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 8 0 1 52.427 52.427 3 0.012558 14976 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.823 41.713 0 78.01 43.452 36.812 55.255 47.459 0 74 46 37 56 46 0 1 1 1 1 1 3518.9 9036 1561 8706 21092 24321 24321 1 HYAMQEAK Unmodified 976.44365 0.44365089 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 0 6.5 0.5 1 1 35.158 35.158 3 0.0075073 8507 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.787 46.047 0 0 48.098 37.574 0 20.254 0 0 46 37 0 19 0 0 1 1 0 1 1276.5 9037 2442 8707 21093;21094 24322;24323 24322 2 HYASEEIK Unmodified 975.46616 0.46616048 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0.816 1 1 1 36.934 36.934 3 0.00073442 10208 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.62 34.003 88.775 56.275 77.152 154.86 122.54 233.16 83 56 74 148 130 222 2 1 1 2 2 3 15428 9038 2148 8708 21095;21096;21097 24324;24325;24326 24324 3 HYDLSYDTGDK Unmodified 1312.5572 0.55716033 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 4.5 0.5 1 1 47.306 47.306 3 2.1192E-05 15016 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.452 66.883 60.088 0 49.772 49.219 124.31 0 56 0 46 46 121 0 1 0 1 1 2 0 18192 9039 1579 8709 21098;21099 24327;24328 24327 2 HYDPDFLR Unmodified 1061.493 0.49304393 1091 Q9D7V9;G3XA18 Naaa N-acylethanolamine-hydrolyzing acid amidase;N-acylethanolamine-hydrolyzing acid amidase subunit alpha;N-acylethanolamine-hydrolyzing acid amidase subunit beta yes no 0 0 0 0 5 0 1 48.813 48.813 3 0.030867 15440 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.418 33.215 0 0 0 0 18.171 49.583 0 0 0 0 19 47 0 0 0 0 1 1 1635.7 9040 1091 8710 21100 24329 24329 1 HYEVEIR Unmodified 944.47158 0.4715802 1057 G3UWE1;Q52L67;Q9CY27;A0A1D5RLH3 Tecr Very-long-chain enoyl-CoA reductase yes no 0 0 0 0 5 0 1 38.271 38.271 3 0.051229 10309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.756 20.333 9.2776 18.791 47.839 17.03 47.071 38.099 9 19 46 19 47 37 1 1 1 1 1 1 1336.5 9041 1057 8711 21101 24330 24330 1 HYFIEVNSR Unmodified 1163.5724 0.57235688 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 7 0 1 45.974 45.974 3 0.0039691 12629 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.841 38.798 0 29.792 0 0 0 39.442 0 28 0 0 0 37 0 1 0 0 0 1 3286.3 9042 974 8712 21102 24331 24331 1 HYFQNTQGLIFVVDSNDR Unmodified 2152.0338 0.033766329 1693;1833;1834;1700 P84084;P61205;Q8BSL7;P84078;P61750;E9Q798 Arf5;Arf3;Arf2;Arf1;Arf4 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1;ADP-ribosylation factor 4 no no 0 0 0 0 7.5 0.5 1 1 68.42 68.42 3 9.4539E-06 22544 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.333 51.099 49.176 104.45 45.668 38.842 85.034 69.29 46 102 46 37 83 65 1 2 1 1 1 1 10546 9043 1834;1693;1833;1700 8713 21103;21104 24332;24333 24333 2 HYFQNTQGLIFVVDSNDRER Unmodified 2437.1775 0.17747045 1693;1833;1834;1700 P84084;P61205;Q8BSL7;P84078;P61750;E9Q798 Arf5;Arf3;Arf2;Arf1;Arf4 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1;ADP-ribosylation factor 4 no no 0 0 0 1 8.5 0.5 1 1 62.25 62.25 4 9.2232E-17 19644 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.08 92.601 78.189 179.73 135.42 0 206.48 200.91 74 176 130 0 204 194 1 2 1 0 2 2 36829 9044 1834;1693;1833;1700 8714 21105;21106 24334;24335 24334 2 HYGALIGLNR Unmodified 1112.6091 0.60907674 678 D3YYH3;D3YUE8;D3Z223;P15327 Bpgm Phosphoglycerate mutase;Bisphosphoglycerate mutase yes no 0 0 0 0 9 0 1 49.216 49.216 3 0.026511 12730 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.635 25.771 49.358 0 0 0 37.384 38.375 46 0 0 0 37 37 1 0 0 0 1 1 3117.1 9045 678 8715 21107 24336 24336 1 HYGGLTGLNK Unmodified 1058.5509 0.55089316 3126;1246 O70250;Q9DBJ1 Pgam2;Pgam1 Phosphoglycerate mutase 2;Phosphoglycerate mutase 1 no no 0 0 0 0 8.88 3.52 1 1 1 1 1 1 1 1 45.913 45.913 2;3 1.5681E-08 11194 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142.56 85.647 880.6 1917.3 2176.1 1863.8 2274.8 1862 830 1892 2188 1863 2311 1794 5 7 5 6 5 4 299030 9046 1246;3126 8716 21108;21109;21110;21111;21112;21113;21114;21115 24337;24338;24339;24340;24341;24342;24343;24344 24340 8 HYGPGWVSMANAGK Unmodified 1473.6823 0.68231804 1444 P24369 Ppib Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 9 0 1 53.743 53.743 3 0.0020845 14871 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.071 31.064 0 78.736 0 0 0 88.478 0 74 0 0 0 83 0 1 0 0 0 1 5530.6 9047 1444 8717 21116 24345 24345 1 HYLFDVQR Unmodified 1076.5403 0.54032847 2937 Q9CQQ7;A0A0G2JGX3 Atp5f1 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 0 11 2 1 1 48.9 48.9 3 0.0043808 15425 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.318 53.467 59.526 34.26 65.466 56.303 53.333 77.362 56 37 65 56 56 74 1 1 1 1 1 1 8072.1 9048 2937 8718 21117;21118 24346;24347 24347 2 HYPYISTR Unmodified 1035.5138 0.51377937 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9 2.38 1 1 1 1 1 1 38.379 38.379 3 0.00072559 8540 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.85 89.914 281.37 435.01 371.97 363.74 591.81 433.82 264 426 373 361 596 417 3 6 3 4 6 3 170400 9049 1160 8719 21119;21120;21121;21122;21123;21124 24348;24349;24350;24351;24352;24353;24354 24351 7 HYQGTVDK Unmodified 946.45084 0.45084476 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 32.064 32.064 2;3 0.0022595 7356 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.111 52.081 600.48 210.89 610 600.74 645.89 710.71 564 218 603 594 662 684 5 4 5 5 4 5 154610 9050 1160 8720 21125;21126;21127;21128 24355;24356;24357;24358;24359 24359 5 IAAAQYSVTGSAVAR Unmodified 1463.7732 0.77324153 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 8.67 4.4 2 1 1 1 1 1 2 53.102 53.102 2;3 4.1115E-49 15373 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 194.98 165.92 257.13 388.73 133.16 245.56 185.93 554.23 241 382 136 230 188 524 4 7 4 4 6 7 127720 9051 2129 8721 21129;21130;21131;21132;21133;21134;21135;21136;21137 24360;24361;24362;24363;24364;24365;24366;24367;24368 24362 9 IAAFADAAVDPIDFPLAPAYAVPK Unmodified 2442.2835 0.28349865 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.12 2.52 1 2 1 1 1 2 99.814 99.814 3;4;5 4.9356E-10 35646 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.184 49.168 119.35 104.32 156.68 44.494 138.32 89.374 112 101 151 42 135 86 7 5 6 3 5 6 69013 9052 2622 8722 21138;21139;21140;21141;21142;21143;21144;21145 24369;24370;24371;24372;24373;24374;24375;24376;24377;24378;24379;24380 24374 12 IAAFLQSDR Unmodified 1019.54 0.53999412 1584 P48774;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 9.5 0.5 1 1 64.982 64.982 2 0.00043201 20311 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.98 76.539 690.36 592.03 1310.8 766.02 751.83 870.79 650 611 1279 767 781 837 2 2 3 2 2 2 144660 9053 1584 8723 21146;21147 24381;24382;24383 24382 3 IAAGIFK Unmodified 718.43776 0.43776088 2600 Q8K2Q7 Brox BRO1 domain-containing protein BROX yes yes 0 0 0 0 10 0 1 65.272 65.272 2 0.026994 18311 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.775 5.2094 1114 861.02 1220.2 954.92 859.78 1190.7 1049 899 1220 955 903 1140 1 1 1 1 1 1 119460 9054 2600 8724 21148 24384 24384 1 IAAIVVK Unmodified 712.48471 0.48471107 3364 Q9Z0U1 Tjp2 Tight junction protein ZO-2 yes yes 0 0 0 0 11 0 1 61.619 61.619 2 0.027116 16299 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.093 91.093 79.128 54.248 0 0 74.072 97.024 74 56 0 0 74 93 1 1 0 0 1 1 6835.4 9055 3364 8725 21149 24385 24385 1 IAALFMK Unmodified 792.45678 0.45678176 619 B2RQR5;Q8BPQ7;D3Z7V4;D3YUT7 Sgsm1 Small G protein signaling modulator 1 yes no 0 0 0 0 1 0 2 78.109 78.109 2;3 0.017943 27225 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.88 50.899 0 296.46 151.2 262.85 220.73 622.45 0 281 167 245 243 588 0 2 2 1 2 1 4894.3 9056 619 8726 21150;21151 24386;24387 24386 2 IAALMLAR Unmodified 857.51569 0.51569363 1978 Q3UHB8 Ccdc177 Coiled-coil domain-containing protein 177 yes yes 0 0 0 0 1 0 1 69.625 69.625 2 0.01727 23524 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.294 15.747 0 14.683 12.743 34.217 0 0 0 14 14 32 0 0 0 1 1 1 0 0 8600.7 9057 1978 8727 21152 24388 24388 1 IAALQAFADQLIAVDHYAK Unmodified 2057.0946 0.094575672 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 11.1 1.36 1 2 2 1 2 95.203 95.203 3;4 8.5483E-36 38173 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.76 105.41 351.44 430.12 342.35 373.26 274.41 129.51 330 432 331 352 271 124 7 11 7 4 7 5 416280 9058 551 8728 21153;21154;21155;21156;21157;21158;21159;21160 24389;24390;24391;24392;24393;24394;24395;24396;24397;24398;24399;24400;24401;24402;24403;24404 24403 16 IAALTVGGK Unmodified 828.5069 0.50690308 772 F6W7C7;D3Z456;Q99N95 Mrpl3 39S ribosomal protein L3, mitochondrial yes no 0 0 0 0 11 0 1 59.465 59.465 2 0.0017262 15432 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.442 56.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9059 772 8729 21161 24405 24405 1 IAAPDYIPTVEDILR Unmodified 1684.9036 0.903587 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 7.4 2.87 1 2 1 1 88.659 88.659 2;3 0.00030466 33332 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.288 48.177 9.6018 29.329 36.976 48.663 82.762 78.629 9 28 37 47 84 75 1 1 2 3 4 3 15890 9060 1255 8730 21162;21163;21164;21165;21166 24406;24407;24408;24409;24410;24411 24409 6 IAAQDLLLAVATDFQNESAVALATAATR Unmodified 2843.5029 0.50288692 957 E9QKZ2;Q91YE6;E0CXB2 Ipo9 Importin-9 yes no 0 0 0 0 9 0 1 115.89 115.89 4 2.7752E-05 38672 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.666 37.047 3.219 0 0 6.558 0 0 3 0 0 6 0 0 1 0 0 1 0 0 1098.9 9061 957 8731 21167 24412 24412 1 IAAQTLLGTAK Unmodified 1085.6445 0.64445919 3140 Q9DCC4 Pycrl Pyrroline-5-carboxylate reductase 3 yes yes 0 0 0 0 10.5 0.5 1 1 64.698 64.698 2 2.1553E-42 17549 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 199.68 144 59.207 121.85 173.49 112.3 220.27 75.715 56 121 172 116 218 74 1 2 2 2 2 1 21308 9062 3140 8732 21168;21169 24413;24414 24414 2 IAASYGNVISVFEPVSLPK Unmodified 1990.0775 0.077528625 1041 F8WGX5;Q6PNC0 Dmxl1 DmX-like protein 1 yes no 0 0 0 0 10 0 1 90.149 90.149 3 0.0014253 29280 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.131 27.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9063 1041 8733 21170 24415 24415 1 IAATILTSPDLR Unmodified 1269.7293 0.72925145 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 10.3 1.67 1 2 1 1 1 1 71.121 71.121 2;3 6.3967E-60 21051 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 211.78 141.97 748.81 735.46 911.82 470.35 794.55 944.37 705 753 905 476 800 917 6 9 8 5 7 8 707820 9064 1312 8734 21171;21172;21173;21174;21175;21176;21177 24416;24417;24418;24419;24420;24421;24422;24423;24424;24425 24420 10 IAATILTSPDLRK Unmodified 1397.8242 0.82421447 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 12 1 1 1 64.885 64.885 3 1.7542E-18 17727 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 144.51 114.75 443.41 129.68 387.55 227.2 169.43 491.92 416 130 369 229 167 466 2 1 1 1 1 2 43935 9065 1312 8735 21178;21179 24426;24427 24426 2 IAAWLAQK Unmodified 899.52289 0.52288749 3298 Q9R013 Ctsf Cathepsin F yes yes 0 0 0 0 6.5 5.5 1 1 71.999 71.999 2 0.0034787 24540 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.98 56.628 268.89 213.87 251.81 319.62 339.45 348.49 253 222 259 312 350 336 2 2 2 2 2 2 15820 9066 3298 8736 21180;21181 24428;24429 24428 2 IAAYAYSALSQIR Unmodified 1425.7616 0.76161421 2908 Q9CQ22 Lamtor1 Ragulator complex protein LAMTOR1 yes yes 0 0 0 0 6.5 5.5 1 1 80.702 80.702 2 0.00041871 28184 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.338 54.665 0 0 29.01 28.875 9 20.254 0 0 28 28 9 19 0 0 2 2 1 1 5236.5 9067 2908 8737 21182;21183 24430;24431;24432 24430 3 IAAYEEGGK Unmodified 936.45526 0.45526144 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 5.5 0.5 1 1 48.57 48.57 2 0.00088433 15277 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.41 61.075 59.634 0 76.367 76.331 0 0 56 0 74 74 0 0 1 0 1 1 0 0 4957.3 9068 3373 8738 21184;21185 24433;24434 24433 2 IAAYLFK Unmodified 824.47963 0.47962569 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.25 4.82 1 1 1 1 75.005 75.005 2 0.0094925 19953 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.12 68.729 4177.7 3609.5 4189.8 4075.5 4578.6 4142.3 3932 3723 4229 4028 4672 3997 8 9 7 8 8 8 1241900 9069 2185 8739 21186;21187;21188;21189 24435;24436;24437;24438;24439;24440;24441;24442;24443;24444 24442 10 IACLDFSLQK Unmodified 1193.6114 0.6114445 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 9.5 0.5 1 1 75.116 75.116 3 0.00087411 22679 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.098 33.46 138.76 71.023 61.775 134.59 144.99 105.9 130 74 65 129 148 102 2 1 1 2 2 1 21905 9070 1356 8740 21190;21191 24445;24446 24446 2 IACNLAWLVAK Unmodified 1257.6904 0.69036353 73 H7BX08;A0A0A6YY67;Q8C1B1 Camsap2 Calmodulin-regulated spectrin-associated protein 2 yes no 0 0 0 0 8 4.97 1 1 1 84.251 84.251 3 0.019203 26266 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.765 22.567 118.59 109.81 8.5038 0 0 108.73 111 112 9 0 0 102 2 3 1 0 0 2 5814.4 9071 73 8741 21192;21193;21194 24447;24448;24449 24448 3 IADFGFSNLFTPGQLLK Unmodified 1866.988 0.98798534 813 F6U8X4;F6U6U5;F6S7W6;E9PU87;Q6P4S6 Sik3 Serine/threonine-protein kinase SIK3 yes no 0 0 0 0 11.5 0.5 1 1 99.443 99.443 3 2.8743E-12 32842 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.86 90.714 44.856 41.663 0 24.806 17.727 43.342 42 42 0 23 19 42 2 2 0 1 1 2 12164 9072 813 8742 21195;21196 24450;24451;24452 24451 3 IADGYEQAAR Unmodified 1092.52 0.51998696 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 3.5 0.5 1 1 42.737 42.737 2 5.7286E-09 13266 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 154.05 101.76 186.53 151.16 261.92 138.04 229.31 52.208 176 158 257 139 227 51 2 2 2 1 2 1 27785 9073 1825 8743 21197;21198 24453;24454 24453 2 IADLPPANPDHIGGYR Unmodified 1704.8584 0.85836815 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 5.5 0.5 1 1 56.033 56.033 3 1.0345E-05 18895 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.772 52.859 59.397 64.121 61.863 96.982 52.122 58.209 56 65 65 93 56 56 1 1 1 1 1 1 4395.2 9074 2396 8744 21199;21200 24455;24456 24455 2 IADPEHDHTGFLTEYVATR Unmodified 2171.0283 0.028346601 769 D3Z3G6;Q63844;A0A0U1RPX4;D3Z6D8 Mapk3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 0 5 0 1 60.572 60.572 4 3.734E-06 21034 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.653 64.384 49.057 26.008 28.488 0 76.124 37.27 46 28 28 0 74 37 1 1 1 0 1 1 6739 9075 769 8745 21201 24457 24457 1 IADYEAASAAPGIPAEQTR Unmodified 1929.9432 0.94321999 3346 Q9WV96;A0A1B0GRJ5;D6RG99 Timm10b Mitochondrial import inner membrane translocase subunit Tim10 B yes no 0 0 0 0 4 0 1 60.327 60.327 3 4.7371E-07 21193 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.892 53.161 0 0 0 40.441 0 29.848 0 0 0 37 0 28 0 0 0 1 0 1 5310.4 9076 3346 8746 21202 24458 24458 1 IAECSSQLAEEEEK Unmodified 1621.7141 0.71413125 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3 1 1 1 54.166 54.166 3 4.3035E-17 18225 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.61 106.78 39.701 23.917 33.189 20.234 28.359 44.772 37 23 32 19 28 42 1 1 1 1 1 1 7558.7 9077 1974 8747 21203;21204 24459;24460 24460 2 IAEEFEVELER Unmodified 1362.6667 0.66671078 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 3 0 1 73.864 73.864 2 0.0022905 27634 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.017 53.902 29.952 18.196 0 0 29.288 0 28 19 0 0 28 0 1 1 0 0 1 0 3730.6 9078 974 8748 21205 24461 24461 1 IAEELVAVAR Unmodified 1069.6132 0.61315906 2535 Q8CGA0 Ppm1f Protein phosphatase 1F yes yes 0 0 0 0 5.5 0.5 1 1 68.502 68.502 2 0.0015853 24692 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.886 48.384 59.568 53.673 113.33 73.08 55.717 126.33 56 56 111 74 56 120 1 2 2 2 1 2 6723.6 9079 2535 8749 21206;21207 24462;24463 24462 2 IAEESNFPFIK Unmodified 1293.6605 0.66050319 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8.43 2.13 1 2 1 2 1 74.91 74.91 2;3 1.7364E-13 28344 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.04 99.255 1156.8 1065.3 1001.5 871.65 710.16 1327.5 1088 1078 997 844 734 1259 10 8 7 8 7 8 233920 9080 1554 8750 21208;21209;21210;21211;21212;21213;21214 24464;24465;24466;24467;24468;24469;24470;24471;24472;24473;24474;24475 24475 12 IAEFAFEYAR Unmodified 1215.5924 0.59242362 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 9 2.38 1 1 1 1 1 1 74.142 74.142 2 7.9938E-08 26009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142.56 100.49 386.99 508.81 331.35 402.8 538.87 697.59 362 501 325 389 546 667 5 6 3 6 6 7 218200 9081 307 8751 21215;21216;21217;21218;21219;21220 24476;24477;24478;24479;24480;24481;24482;24483;24484 24478 9 IAEGTFPGK Unmodified 918.48108 0.48108226 1639 P56391;A0A140LIU3 Cox6b1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 0 8 2.61 2 1 1 1 55.968 55.968 2;3 0.00082805 16628 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.64 71.804 916.42 1111.5 1114.1 957.05 1162.1 806.67 863 1113 1135 946 1170 778 7 8 9 7 7 8 217330 9082 1639 8752 21221;21222;21223;21224;21225 24485;24486;24487;24488;24489;24490;24491;24492;24493 24490 9 IAEGTFPGKI Unmodified 1031.5651 0.56514624 1639 P56391;A0A140LIU3 Cox6b1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 1 8.25 2.77 1 2 1 65.162 65.162 2;3 9.3772E-05 23349 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.36 73.956 148.23 187.52 240.93 273.3 279.73 230.49 139 185 241 268 287 222 2 2 2 3 3 2 78987 9083 1639 8753 21226;21227;21228;21229 24494;24495;24496;24497 24497 4 IAELEEER Unmodified 987.48729 0.48728985 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 2.5 0.5 1 1 50.884 50.884 2 0.012552 16652 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.921 5.6075 129.08 79.264 84.24 43.705 128.99 114.65 121 84 83 46 129 111 1 2 1 1 2 2 30738 9084 1382 8754 21230;21231 24498;24499 24498 2 IAELTSQLQLADSK Unmodified 1515.8144 0.81443765 1915 Q3TDD9 Ppp1r21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 0 8 0 1 75.939 75.939 3 0.0084745 26127 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.798 20.193 59.701 34.748 35.564 46.786 72.947 67.208 56 37 37 46 74 65 1 1 1 1 1 1 2939.3 9085 1915 8755 21232 24500 24500 1 IAENNDLLWMDYHQK Unmodified 1888.8778 0.87778296 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 6.5 0.5 1 1 67.77 67.77 3 2.323E-22 23673 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.9 107.87 0 0 78.531 34.512 66.405 0 0 0 74 37 65 0 0 0 1 1 1 0 9871 9086 1157;2210 8756 21233;21234 24501;24502 24501 2 IAENVEEVK Unmodified 1029.5342 0.53424004 1197 O35526;D6RFB9;A0A0J9YUA0 Stx1a Syntaxin-1A yes no 0 0 0 0 6.25 3.96 1 1 1 1 52.942 52.942 2;3 0.0011978 17396 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.338 21.988 88.644 179.26 121.29 175.37 179.47 273.37 83 176 121 167 185 260 1 4 3 3 3 3 38007 9087 1197 8757 21235;21236;21237;21238 24503;24504;24505;24506 24505 4 IAENVEEVKR Unmodified 1185.6354 0.63535107 1197 O35526;D6RFB9;A0A0J9YUA0 Stx1a Syntaxin-1A yes no 0 0 0 1 5 0 1 46.641 46.641 3 6.8232E-06 14335 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.16 75.38 177.82 84.3 159.24 129.36 172.21 173.11 167 93 158 130 176 167 1 1 1 1 1 1 16064 9088 1197 8758 21239 24507 24507 1 IAEQLGEGDEVIEK Unmodified 1528.7621 0.76206772 1200 O35621;Q9D6D9;A0A2R8W6J8 Pmm1 Phosphomannomutase 1;Phosphomannomutase yes no 0 0 0 0 3 0 1 65.141 65.141 3 0.00012644 23506 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.73 47.086 0 38.766 36.002 38.295 0 59.696 0 37 37 37 0 56 0 1 1 1 0 1 3909.2 9089 1200 8759 21240 24508 24508 1 IAEQVEIFHQEK Unmodified 1469.7514 0.75144346 799 E0CXB9;Q61301 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 5.5 0.5 1 1 59.055 59.055 3 2.6408E-06 20360 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.73 54.837 68.35 101.44 148.52 140.74 124.18 155.29 65 102 149 139 130 149 2 2 2 2 2 2 11703 9090 799 8760 21241;21242 24509;24510 24509 2 IAEVGAGGNK Unmodified 914.48214 0.48214489 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 6.75 0.829 2 1 1 45.272 45.272 2;3 5.0148E-05 12309 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.74 68.779 187.8 117.18 169.56 164.32 125.13 223.49 176 121 167 158 129 213 3 3 3 3 2 3 51553 9091 1542 8761 21243;21244;21245;21246 24511;24512;24513;24514 24513 4 IAEVGAGGSK Unmodified 887.47125 0.47124585 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 0 7 0.816 1 1 1 45.562 45.562 2;3 0.0014045 12503 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.808 48.66 138.78 98.582 35.195 27.834 130.44 124.2 130 102 37 28 130 120 2 2 1 1 2 2 7431.8 9092 1186 8762 21247;21248;21249 24515;24516;24517 24516 3 IAEVGGVPYLLPLVNK Unmodified 1680.9814 0.98144339 302 A0A1L1SSF8;Q91V76 Ester hydrolase C11orf54 homolog yes no 0 0 0 0 10.5 0.5 1 1 90.395 90.395 3 3.5656E-05 29358 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.939 81.297 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 8691 9093 302 8763 21250;21251 24518;24519 24518 2 IAEYAFK Unmodified 840.43815 0.43815481 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 62.042 62.042 2 0.021687 19701 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.12 50.567 466.24 536.76 676.46 606.15 844.82 706.32 438 540 673 606 851 679 3 4 4 4 4 3 117330 9094 1814 8764 21252;21253;21254;21255 24520;24521;24522;24523;24524 24521 5 IAFAITAIK Unmodified 946.58515 0.5851534 340 F6YVP7;A0A1Y7VKY1;P62270;S4R1N6 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 6.5 5.5 1 1 77.38 77.38 2;3 0.00083161 20732 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.5 71.431 156.98 107.73 215.7 168.58 0 118.33 148 111 213 166 0 111 3 2 3 3 0 1 13116 9095 340 8765 21256;21257 24525;24526;24527 24526 3 IAFFTLPK Unmodified 935.54804 0.54803961 3168 Q9EPU0 Upf1 Regulator of nonsense transcripts 1 yes yes 0 0 0 0 4.67 5.19 2 1 82.544 82.544 2 0.0027408 28671 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.67 65.88 39.406 0 186.07 124.09 166.78 174.37 37 0 176 121 167 167 1 0 3 2 2 3 18047 9096 3168 8766 21258;21259;21260 24528;24529;24530;24531 24528 4 IAFIMDESNVLDSGFLER Unmodified 2054.9983 0.99829203 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7 0 1 96.819 96.819 3 4.7136E-05 35616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.337 38.544 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 1632.6 9097 3204 8767 21261 24532 24532 1 IAFLQGER Unmodified 932.50797 0.50796571 3184 Q9ERG2;B2RQS1 Strn3 Striatin-3 yes no 0 0 0 0 9 0 1 60.318 60.318 2 0.050391 17992 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.48 21.977 78.578 52.718 93.772 73.964 70.671 97.121 74 56 93 74 74 93 1 1 1 1 1 1 8723.4 9098 3184 8768 21262 24533 24533 1 IAFSCPQK Unmodified 949.46914 0.46913736 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 11 2 1 1 54.064 54.064 3 0.011709 18156 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.76 32.586 59.26 130.72 215.44 154.57 222.83 66.42 56 130 213 157 222 65 1 2 2 2 2 1 13469 9099 2899 8769 21263;21264 24534;24535 24535 2 IAFSTSSLLK Unmodified 1065.607 0.60701105 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 72.389 72.389 2 3.2758E-05 18752 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.815 48.469 0 86.97 80.273 96.865 0 0 0 83 83 93 0 0 0 1 1 1 0 0 11081 9100 3305 8770 21265;21266 24536;24537 24537 2 IAGDYVSEEVWYR Unmodified 1585.7413 0.7412727 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 7.67 3.86 1 1 1 70.778 70.778 2;3 3.0514E-13 26268 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.03 111.49 39.476 0 96.239 94.012 42.95 87.252 37 0 93 92 46 83 1 0 2 2 1 1 21693 9101 1400;1401 8771 21267;21268;21269 24538;24539;24540 24540 3 IAGEASR Unmodified 702.36605 0.3660525 1350 Q6ZWY9;Q64525;Q64478;P10854 Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M yes no 0 0 0 0 5.5 1.12 1 1 1 1 29.135 29.135 2 2.2876E-15 5619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 180 43.109 1712.2 1689.6 1688.9 1142.3 2651.3 2258.3 1613 1723 1682 1167 2659 2188 4 4 3 3 4 3 430150 9102 1350 8772 21270;21271;21272;21273 24541;24542;24543;24544 24543 4 IAGHPLAQNER Unmodified 1204.6313 0.63126874 1259 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493 Snx12 Sorting nexin-12 yes no 0 0 0 0 9.33 2.62 1 1 1 32.788 32.788 3 9.6985E-06 6671 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.568 75.717 105.27 65.38 27.387 0 37.714 28.772 102 65 28 0 37 28 2 2 1 0 1 1 19539 9103 1259 8773 21274;21275;21276 24545;24546;24547 24545 3 IAGLCNR Unmodified 802.41196 0.41195684 2253;2699 Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 9 0 1 43.176 43.176 2 0.00095215 10072 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 157.88 111.08 446.77 291.85 406.54 0 0 411.48 420 309 394 0 0 386 1 1 1 0 0 1 66445 9104 2253;2699 8774 21277 24548 24548 1 IAGQVAAANK Unmodified 941.52943 0.52942943 3013 Q9CZX8 Rps19 40S ribosomal protein S19 yes yes 0 0 0 0 8 1 1 1 45.2 45.2 2 3.0912E-05 10910 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.442 64.634 59.862 0 38.032 38.174 0 0 56 0 37 37 0 0 1 0 1 1 0 0 2703.6 9105 3013 8775 21278;21279 24549;24550 24550 2 IAGQVAAANKK Unmodified 1069.6244 0.62439245 3013 Q9CZX8 Rps19 40S ribosomal protein S19 yes yes 0 0 0 1 9.5 0.5 1 1 43.003 43.003 3 2.4448E-05 8903 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.788 71.964 29.587 36.607 45.793 36.66 55.922 28.252 28 37 46 37 56 28 1 1 1 1 1 1 3989.1 9106 3013 8776 21280;21281 24551;24552 24552 2 IAGQVGR Unmodified 699.40277 0.40277236 2201 Q6NS60 Fbxo41 F-box only protein 41 yes yes 0 0 0 0 6 0 1 31.65 31.65 2 0.044734 6806 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.944 19.392 449.95 259.16 439.96 386.54 427.84 0 423 279 439 385 426 0 1 1 1 1 1 0 58739 9107 2201 8777 21282 24553 24553 1 IAGSLIK Unmodified 700.44833 0.44832557 3435 yes yes 0 0 0 0 10 0 1 59.411 59.411 2 0.027535 15829 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.62 0 269.44 159.26 206.73 166.47 256.75 189.88 253 170 208 168 259 185 1 1 1 1 1 1 20617 + 9108 3435 8778 21283 24554 24554 1 IAGYVTHLMK Unmodified 1131.6111 0.61105057 1782 P63276 Rps17 40S ribosomal protein S17 yes yes 0 0 0 0 11 0 1 64.257 64.257 3 3.1016E-06 17421 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.38 96.262 78.896 0 85.08 0 97.278 0 74 0 79 0 93 0 1 0 1 0 1 0 13299 9109 1782 8779 21284 24555 24555 1 IAIAALEVLEEENLAENADK Unmodified 2154.1056 0.10559387 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 5 0 2 98.268 98.268 3;4 7.6579E-17 35789 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.3 100.8 22.416 5.2701 15.167 15.327 8.7099 5.33 21 6 15 15 9 5 2 1 1 1 1 1 2885.9 9110 1489 8780 21285;21286 24556;24557 24556 2 IAIEHIFPR Unmodified 1094.6237 0.62366417 3441 yes yes 0 0 0 0 12 0 1 52.58 52.58 3 0.0046627 11369 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.679 13.772 118.33 0 129.24 0 160.34 143.6 111 0 120 0 158 139 1 0 1 0 1 1 172820 + 9111 3441 8781 21287 24558 24558 1 IAIFGATGR Unmodified 904.51305 0.51305109 864 E9PZC3;Q923D2;A0A0U1RPU7 Blvrb Flavin reductase (NADPH) yes no 0 0 0 0 11 0 1 62.252 62.252 2 0.0038043 16514 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.921 56.108 158.8 0 0 0 145.39 0 148 0 0 0 139 0 1 0 0 0 1 0 22389 9112 864 8782 21288 24559 24559 1 IAILTCPFEPPKPK Unmodified 1609.8902 0.89018555 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 1 11.2 1.07 2 2 1 1 72.342 72.342 3;4 6.7678E-05 21175 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.185 64.393 581.62 626.31 350.38 369.79 341.01 380.43 546 631 356 356 343 366 5 8 3 4 4 6 93896 9113 1825 8783 21289;21290;21291;21292;21293;21294 24560;24561;24562;24563;24564;24565;24566;24567 24563 8 IAIQHLDK Unmodified 936.53927 0.53926584 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 9.33 2.62 1 1 1 48.896 48.896 3 0.00070008 14147 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.52 64.286 382.46 195.11 477.5 220.64 334.45 350.15 360 204 463 223 333 333 3 2 3 2 2 2 53147 9114 1825 8784 21295;21296;21297 24568;24569;24570 24568 3 IAIVNHDK Unmodified 908.50797 0.50796571 1694 P61222 Abce1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 0 7 0 1 43.048 43.048 3 0.010599 11330 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.999 29.159 0 0 0 39.373 56.767 0 0 0 0 37 56 0 0 0 0 1 1 0 1922.4 9115 1694 8785 21298 24571 24571 1 IAIWTTECENR Unmodified 1391.6503 0.65034921 97 A0A0G2JFB4;A0A0G2JH04;P63073;A0A0G2JGT5 Eif4e Eukaryotic translation initiation factor 4E yes no 0 0 0 0 8 0 1 63.043 63.043 2 0.059055 20012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.16 32.22 34.078 0 43.38 42.48 44.671 43.497 32 0 42 42 46 42 1 0 1 1 1 1 3354.1 9116 97 8786 21299 24572 24572 1 IAIYELLFK Unmodified 1108.6532 0.65323296 1785 P63325;A0A338P7K4;Q3UW83;A0A338P731 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 9 4.64 1 1 2 96.499 96.499 2;3 7.1711E-05 27438 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.55 83.429 83.907 141.88 138.55 99.361 18.486 149.38 79 139 139 96 19 141 2 2 4 3 1 5 38387 9117 1785 8787 21300;21301;21302;21303 24573;24574;24575;24576;24577;24578 24577 6 IAKDEGANAFFK Unmodified 1309.6667 0.6666512 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 1 8 0 1 60.694 60.694 3 0.00067276 18880 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.891 49.01 274.69 0 0 172.69 0 159.9 256 0 0 158 0 150 1 0 0 1 0 1 44641 9118 1585 8788 21304 24579 24579 1 IAKPLSSLTPLIAAAK Unmodified 1592.9865 0.98652877 1099 G5E884 Pak1 Non-specific serine/threonine protein kinase yes yes 0 0 0 1 4.67 5.19 4 2 81.971 81.971 3;4 3.3361E-11 31100 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.96 115.07 512.88 411.52 575.35 284.57 347.1 570 483 428 567 278 352 544 9 9 9 6 5 9 81262 9119 1099 8789 21305;21306;21307;21308;21309;21310 24580;24581;24582;24583;24584;24585;24586;24587;24588;24589;24590 24583 11 IAKPVSLLEK Unmodified 1096.6856 0.68559573 1157 O08539 Bin1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 1 10 0 2 62.542 62.542 2;3 0.0009897 17137 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.67 87.103 218.34 213.36 272.95 143.02 189.74 175.81 206 216 271 149 192 170 2 1 2 2 1 2 95824 9120 1157 8790 21311;21312 24591;24592 24591 2 IALALASR Unmodified 813.50724 0.50723743 2831 Q99JP7 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes yes 0 0 0 0 11.5 0.5 1 1 59.284 59.284 2 0.017966 13951 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.451 39.248 327.46 173.21 0 407.33 193.23 211.95 306 176 0 376 202 204 2 1 0 2 1 1 42125 9121 2831 8791 21313;21314 24593;24594 24594 2 IALALNK Unmodified 741.47487 0.47487467 2001 Q3UPL0;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 11.3 0.471 2 1 62.358 62.358 2;3 0.02025 15106 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.84 41.971 129.34 25.749 60.242 39.019 75.612 367.7 121 28 56 37 74 364 2 1 1 1 1 2 33076 9122 2001 8792 21315;21316;21317 24595;24596;24597 24597 3 IALHNQK Unmodified 822.47119 0.47118627 2184 Q68ED7 Crtc1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 0 9 0 1 36.08 36.08 3 0.051214 7292 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.761 34.243 88.42 52.57 62.923 85.465 79.932 86.197 83 56 65 83 83 83 1 1 1 1 1 1 13167 9123 2184 8793 21318 24598 24598 1 IALHNQK Deamidation (N) 823.4552 0.45520186 2184 Q68ED7 Crtc1 CREB-regulated transcription coactivator 1 yes yes 0 1 0 0 10 0 1 36.248 36.248 3 0.029297 6393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.432 27.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9124 2184 8793 21319 24599 24599 855 1 IALLNVELELK Unmodified 1253.7595 0.75948895 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 9 0 1 87.934 87.934 3 0.00030629 30968 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.841 45.494 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9125 1822 8794 21320 24600 24600 1 IALLNVELELK Deamidation (N) 1254.7435 0.74350453 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 1 0 0 10 0 1 77.652 77.652 3 0.043906 23880 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.706 25.66 107.65 187.18 143.44 110.41 125.61 154.18 102 185 148 111 130 148 1 1 1 1 1 1 2185 9126 1822 8794 21321 24601 24601 739 1 IALLQSLLDDANLR Unmodified 1553.8777 0.8777066 2461 Q8BUK6;F6W1A2 Hook3 Protein Hook homolog 3 yes no 0 0 0 0 11.3 1.25 1 1 1 98.831 98.831 2;3 0.00027664 32305 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.417 58.43 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 9725.9 9127 2461 8795 21322;21323;21324 24602;24603;24604;24605 24602 4 IALMPLFQAEK Unmodified 1259.6948 0.6947802 3188 Q9ERS2 Ndufa13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 0 0 0 0 9.2 4.17 1 1 1 2 84.82 84.82 2;3 0.00013146 23601 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.538 63.581 39.701 19.907 96.874 55.73 27.961 98.34 37 19 94 56 28 93 1 1 3 3 1 3 36496 9128 3188 8796 21325;21326;21327;21328;21329 24606;24607;24608;24609;24610;24611 24611 6 IALTQSAANVK Unmodified 1114.6346 0.63462279 3262 Q9QWW1;E9Q4F9;A0A140LHR9;A0A140LJ06 Homer2 Homer protein homolog 2 yes no 0 0 0 0 9.5 0.5 1 1 55.142 55.142 2;3 5.3652E-09 13771 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.82 80.735 30.044 0 0 40.441 0 39.442 28 0 0 37 0 37 1 0 0 1 0 1 3104.5 9129 3262 8797 21330;21331 24612;24613 24613 2 IALTQSFSK Unmodified 993.5495 0.54949617 614 B2RQ71;E9PWR4;B7ZMZ7;A0A1Y7VMZ0 Dip2c yes no 0 0 0 0 10.5 0.5 1 1 62.602 62.602 2 0.0011531 16718 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.181 61.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9130 614 8798 21332;21333 24614;24615 24615 2 IALYCHQLNICSK Unmodified 1618.796 0.79596759 799;1454 E0CXB9;Q61301;P26231 Ctnna2;Ctnna1 Catenin alpha-2;Catenin alpha-1 no no 0 0 0 0 10 0 1 60.087 60.087 3 8.3507E-05 16082 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.466 52.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9131 799;1454 8799 21334 24616 24616 1 IALYETPTGWK Unmodified 1277.6656 0.66558856 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 8.5 0.5 1 1 72.044 72.044 2 2.5519E-10 23538 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.83 89.108 59.523 48.944 94.916 0 0 143.91 56 46 88 0 0 135 1 1 1 0 0 2 30366 9132 3022 8800 21335;21336 24617;24618 24618 2 IANATEGSSER Unmodified 1133.5313 0.53127993 1647 P57722;G3UYM5 Pcbp3 Poly(rC)-binding protein 3 yes no 0 0 0 0 4 0 1 32.927 32.927 2 0.0045303 8190 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.107 48.117 39.464 0 39.835 0 0 0 37 0 37 0 0 0 1 0 1 0 0 0 3144.7 9133 1647 8801 21337 24619 24619 1 IANDNSLNHEYLPILGLAEFR Unmodified 2398.2281 0.22810904 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 7.43 0.904 1 3 2 1 85.839 85.839 3;4 2.9827E-11 31185 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.395 66.327 207.87 243.06 121.35 21.929 102.96 241.18 195 241 121 24 102 229 6 7 3 2 2 7 82386 9134 1311 8802 21338;21339;21340;21341;21342;21343;21344 24620;24621;24622;24623;24624;24625;24626;24627 24622 8 IANDNSLNHEYLPILGLAEFR Deamidation (N) 2399.2121 0.21212463 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 1 0 0 6 0 1 90.07 90.07 3 9.2124E-06 34019 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.539 42.924 29.872 0 28.881 28.375 26.986 29.078 28 0 28 28 28 28 1 0 1 1 1 1 4539.1 9135 1311 8802 21345 24628 24628 373 1 IANPVEGSSGR Unmodified 1085.5465 0.54653606 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 9.5 3.5 1 1 41.659 41.659 2 0.001228 11558 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.942 38.884 148 0 192.33 62.02 246.67 74.89 139 0 181 65 241 74 2 0 2 1 2 1 26454 9136 1668 8803 21346;21347 24629;24630 24629 2 IANPVEGSTDR Unmodified 1157.5677 0.56766543 394 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6U6;A0A2R8VI92;A0A2R8W6H3 Pcbp2 Poly(rC)-binding protein 2 yes no 0 0 0 0 5.5 0.5 1 1 43.955 43.955 2 6.555E-10 12993 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.81 95.925 99.11 43.648 77.15 29.725 85.453 0 93 46 74 28 83 0 2 1 1 1 2 0 17453 9137 394 8804 21348;21349 24631;24632 24631 2 IAPAFSSMSNK Unmodified 1151.5645 0.56449431 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 10 0 1 60.47 60.47 2 9.1441E-05 16243 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.597 73.567 48.834 35.102 58.24 0 0 59.696 46 37 56 0 0 56 1 1 1 0 0 1 3990.6 9138 2525 8805 21350 24633 24633 1 IAPALISSGISVVEQEK Unmodified 1739.9669 0.96691554 1399 P17183;D3Z6E4;D3Z2S4;D3YVD3 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 9.1 2.26 1 2 1 3 1 2 86.068 86.068 2;3;4 3.3555E-52 31020 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 184.48 144.82 673.66 504.55 757.06 331.9 1162.8 542.24 633 511 730 325 1134 524 8 7 7 6 10 8 316300 9139 1399 8806 21351;21352;21353;21354;21355;21356;21357;21358;21359;21360 24634;24635;24636;24637;24638;24639;24640;24641;24642;24643;24644;24645;24646;24647;24648 24639 15 IAPALISSGISVVEQEKLDNLMLELDGTENK Unmodified 3325.7327 0.73268844 1399 P17183;D3Z6E4;D3Z2S4;D3YVD3 Eno2 Gamma-enolase;Enolase yes no 0 0 0 1 10.2 2.77 1 1 2 101.51 101.51 4;5 2.6716E-32 36766 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.23 91.899 54.172 9.4227 122.93 26.549 25.229 40.854 52 9 121 26 26 39 4 1 6 2 3 4 31148 9140 1399 8807 21361;21362;21363;21364 24649;24650;24651;24652;24653;24654;24655 24649 7 IAPDVLR Unmodified 782.46504 0.46503826 3249 Q9JME5;Q9Z1T1 Ap3b2;Ap3b1 AP-3 complex subunit beta-2;AP-3 complex subunit beta-1 yes no 0 0 0 0 6 0 1 53.956 53.956 2 0.034977 17245 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.305 22.011 59.137 93.618 80.564 74.689 73.973 0 56 93 83 74 74 0 1 1 1 1 1 0 7525.2 9141 3249 8808 21365 24656 24656 1 IAPELYHK Unmodified 969.52837 0.5283668 2872 Q99MN1;Q8R2P8 Kars Lysine--tRNA ligase yes no 0 0 0 0 7.5 0.5 1 1 51.466 51.466 3 0.011446 15026 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.973 30.403 48.841 35.121 57.073 26.154 55.745 47.445 46 37 56 28 56 46 1 1 1 1 1 1 10432 9142 2872 8809 21366;21367 24657;24658 24657 2 IAPPFPQPLDAKPLLSQR Unmodified 1987.1255 0.12548187 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 1 10 0 1 74.461 74.461 3 6.0258E-05 22513 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.502 33.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9143 82 8810 21368 24659 24659 1 IAPSPVVSSGPFLFIK Unmodified 1657.9443 0.94432961 1843 P97333 Nrp1 Neuropilin-1 yes yes 0 0 0 0 11.3 0.471 2 1 87.774 87.774 3;4 2.7211E-17 24850 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.96 98.981 49.358 0 0 102.74 0 193.04 46 0 0 94 0 190 1 0 0 2 0 3 16694 9144 1843 8811 21369;21370;21371 24660;24661;24662;24663 24663 4 IAPTGEEWEEEALDEFDR Unmodified 2134.9331 0.93310881 96 A0A0G2JFB2;Q80VL1;A0A0G2JFE0 Tdrkh Tudor and KH domain-containing protein yes no 0 0 0 0 3 0 1 83.916 83.916 3 0.019144 31091 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.972 24.808 0 0 5.3328 1.7332 7.1762 1.9272 0 0 5 2 7 2 0 0 1 1 1 1 718.97 9145 96 8812 21372 24664 24664 1 IAQDLEMYGINYFEIK Unmodified 1945.9496 0.94955092 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 7 0 1 95.337 95.337 3 0.0004182 35192 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.728 34.674 0 5.0785 14.443 8.9762 0 0 0 5 14 9 0 0 0 1 1 1 0 0 1380.1 9146 1451 8813 21373 24665 24665 1 IAQDLEMYGINYFEIK Deamidation (N) 1946.9336 0.9335665 1451 P26040 Ezr Ezrin yes yes 0 1 0 0 13 0 1 95.09 95.09 3 0.012683 38081 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.202 23.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9147 1451 8813 21374 24666 24666 534 1 IAQFLSGIPETVPLSTVNR Unmodified 2041.1208 0.12079042 2795 Q921H8;H3BKL5;Q8VCH0;H3BJZ9;H3BKA1 Acaa1a;Acaa1b 3-ketoacyl-CoA thiolase A, peroxisomal;3-ketoacyl-CoA thiolase B, peroxisomal yes no 0 0 0 0 11 0.816 1 1 1 89.945 89.945 2;3 3.2181E-05 28775 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.073 47.734 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 21933 9148 2795 8814 21375;21376;21377 24667;24668;24669 24668 3 IAQLEEELEEEQGNTELINDR Unmodified 2471.1664 0.16635622 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 2 1 1 1 82.122 82.122 3 4.8004E-11 28737 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.913 79.286 0 19.899 27.992 8.3443 19.18 9.0467 0 19 28 9 19 9 0 1 2 1 1 1 3478.9 9149 2696 8815 21378;21379 24670;24671 24670 2 IAQLEEQLDNETK Unmodified 1529.7573 0.7573167 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 4 0 1 70.891 70.891 3 0.00010862 25774 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.498 44.116 29.904 27.776 0 50.278 0 0 28 28 0 46 0 0 1 1 0 1 0 0 3702 9150 2696 8816 21380 24672 24672 1 IAQLEEVK Unmodified 928.52295 0.52294707 2937 Q9CQQ7;A0A0G2JGX3 Atp5f1 ATP synthase F(0) complex subunit B1, mitochondrial yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 59.775 59.775 2;3 0.0023566 20661 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.711 13.705 392.76 214.49 351.59 323.92 143.72 194.17 369 232 352 318 158 186 2 2 2 2 2 2 27568 9151 2937 8817 21381;21382;21383;21384;21385 24673;24674;24675;24676;24677 24677 5 IAQLYMIQK Unmodified 1106.6158 0.6158016 854 Q6ZPQ6;E9PYJ7;E0CXR4 Pitpnm2 Membrane-associated phosphatidylinositol transfer protein 2 no no 0 0 0 0 11 0 1 70.823 70.823 2 0.00092648 20469 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.492 52.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9152 854 8818 21386 24678 24678 1 IAQNESELISDEAQGDMALR Unmodified 2189.027 0.027025972 831 E9Q175;E9Q3L1;E9PVU0;E9Q174;V9GXM4;V9GX76;Q64331 Myo6 Unconventional myosin-VI yes no 0 0 0 0 3 0 1 69.597 69.597 3 0.0022598 25681 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.172 25.094 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 1611.5 9153 831 8819 21387 24679 24679 1 IAQPNYIPTQQDVLR Unmodified 1754.9315 0.93153309 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 64.004 64.004 3 5.4814E-05 21919 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.759 72.133 127.14 222.92 281.75 202.22 177.95 370.15 120 222 278 194 185 352 2 3 3 2 2 4 73582 9154 622 8820 21388;21389;21390;21391 24680;24681;24682;24683 24680 4 IAQSDYIPTQQDVLR Unmodified 1745.8948 0.89481323 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 8 3.56 1 1 1 64.156 64.156 3 2.9533E-05 22584 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.069 62.088 148.68 92.978 0 100.15 79.916 145.89 139 93 0 93 83 139 2 1 0 1 1 2 34238 9155 1330 8821 21392;21393;21394 24684;24685;24686 24684 3 IASATHNIYAYR Unmodified 1378.6993 0.69934831 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 0 8 0 1 46.667 46.667 3 0.00060759 12387 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.266 45.19 0 58.304 76.57 0 67.99 0 0 56 74 0 65 0 0 1 1 0 1 0 4541 9156 1234 8822 21395 24687 24687 1 IASEASR Unmodified 732.37662 0.37661719 1349;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q8CGP0;Q9D2U9 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist3h2bb;Hist3h2ba Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 3-B;Histone H2B type 3-A no no 0 0 0 0 9 4 1 1 29.44 29.44 2 6.0013E-06 6177 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 167.24 72.834 611.05 513.34 560.99 698.64 768.14 709.36 575 530 568 683 783 686 2 2 1 2 1 1 124850 9157 1349;2541 8823 21396;21397 24688;24689 24688 2 IASIKPVISETPLPVDLYR Unmodified 2110.2038 0.20379177 40 A0A0A0MQ92;A0A0A0MQB7;Q9WTS5 Tenm2 Teneurin-2;Ten-2, soluble form;Ten-2 intracellular domain yes no 0 0 0 1 10 0 1 81.009 81.009 3 0.0014699 25513 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.34 33.919 69.264 0 80.801 0 56.581 58.081 65 0 75 0 56 56 1 0 1 0 1 1 3900.3 9158 40 8824 21398 24690 24690 1 IASLLLAK Unmodified 827.54804 0.54803961 886 E9Q2E4;Q6GQX8 Gm15800 yes no 0 0 0 0 12 0 1 77.493 77.493 2 0.029626 20758 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.547 30.568 0 38.766 36.002 38.295 0 0 0 37 37 37 0 0 0 1 1 1 0 0 43640 9159 886 8825 21399 24691 24691 1 IASLSWGQMK Unmodified 1119.5747 0.57466507 711 D3YWY5;D3Z442;D3YZD8;Q8R0P4;D3YY39;D3Z1Q3 Aamdc Mth938 domain-containing protein yes no 0 0 0 0 11 0 1 70.271 70.271 3 0.0093776 20225 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.235 30.397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9160 711 8826 21400 24692 24692 1 IASNVQK Unmodified 758.42865 0.42865276 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 8 1 1 1 41.256 41.256 3 0.018012 10484 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.993 28.202 68.994 140.43 168.55 75.584 51.75 196.8 65 139 167 74 56 186 1 2 2 1 1 2 8969.6 9161 1157;2210 8827 21401;21402 24693;24694 24693 2 IASQVAALDLGYKPGVEAIR Unmodified 2070.1473 0.14733952 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 1 10 1.87 1 1 1 1 72.43 72.43 3;4 9.8161E-11 24490 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.49 84.452 188.1 179.26 49.422 50.278 0 138.58 176 176 46 46 0 130 2 2 1 1 0 2 54942 9162 2736 8828 21403;21404;21405;21406 24695;24696;24697;24698 24695 4 IASSEFADDPCSSVK Unmodified 1611.7087 0.70865195 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 4 0 1 58.554 58.554 3 0.0011947 20320 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.966 39.985 0 58.974 36.496 0 0 0 0 56 37 0 0 0 0 1 1 0 0 0 3340.4 9163 799 8829 21407 24699 24699 1 IASSIVAQTAGIPTLPWSGSGLR Unmodified 2281.243 0.24303082 2066 Q5SWU9;V9GWS0 Acaca Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 0 6.5 5.5 1 1 88.311 88.311 3 5.6071E-16 25076 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.627 74.945 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 5321.2 9164 2066 8830 21408;21409 24700;24701 24701 2 IASVIETLGWGDK Unmodified 1387.7347 0.73473076 1087 G3X9N3 Pnmal2 yes yes 0 0 0 0 9 0 1 89.961 89.961 3 0.014948 31777 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.28 27.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9165 1087 8831 21410 24702 24702 1 IASVLGISTPK Unmodified 1084.6492 0.64921022 2445 Q8BR63 Fam177a1 Protein FAM177A1 yes yes 0 0 0 0 8 4.97 1 1 1 71.815 71.815 3 0.00063786 20795 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.652 44.881 198.5 29.478 18.789 0 135.98 49.036 185 28 19 0 130 46 2 1 1 0 1 1 21997 9166 2445 8832 21411;21412;21413 24703;24704;24705 24704 3 IATETDQIGTEIIEELGEQR Unmodified 2244.1121 0.11213581 1264 Q91XH6;O88384;F6UHS3 Vti1b Vesicle transport through interaction with t-SNAREs homolog 1B yes no 0 0 0 0 3 0 1 91.616 91.616 3 1.2621E-10 32064 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.831 65.999 0 0 0 3.1262 8.1225 2.9662 0 0 0 3 8 3 0 0 0 1 1 1 765.25 9167 1264 8833 21414 24706 24706 1 IATIPAFGTIMETVIQR Unmodified 1860.0179 0.017905256 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 13 0 1 97.392 97.392 3 0.0021465 39093 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.391 22.933 0 0 28.57 38.738 0 39.442 0 0 28 37 0 37 0 0 1 1 0 1 2337.4 9168 35 8834 21415 24707 24707 1 IATIQQTTEVFTSTLDDLEER Unmodified 2409.1911 0.19111441 3340 Q9WV18;G3UZ52 Gabbr1 Gamma-aminobutyric acid type B receptor subunit 1 yes no 0 0 0 0 5.5 0.5 1 1 98.258 98.258 3 1.3619E-08 35790 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.917 44.854 0 9.3904 11.1 5.3578 0 12.792 0 9 11 5 0 12 0 2 2 1 0 2 7236.4 9169 3340 8835 21416;21417 24708;24709 24708 2 IATLASGLEVGK Unmodified 1157.6656 0.66558856 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8.78 3.12 1 2 2 2 1 1 71.361 71.361 2;3 7.5258E-21 20638 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 160.18 118.46 423.2 630.82 761.79 691.91 551.28 853.06 398 622 752 668 557 815 5 8 8 6 6 9 527990 9170 106 8836 21418;21419;21420;21421;21422;21423;21424;21425;21426 24710;24711;24712;24713;24714;24715;24716;24717;24718;24719;24720 24719 11 IATPEQLYAAYLGGYEQCDAGWLSDQTVR Unmodified 3274.5241 0.52409264 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 8.75 2.59 1 2 1 95.566 95.566 3;4 1.6517E-18 38308 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.103 68.527 9.5851 42.25 0 0 24 9.594 9 42 0 0 24 9 1 2 0 0 2 1 13130 9171 2125 8837 21427;21428;21429;21430 24721;24722;24723;24724 24724 4 IATVGYLPTQQDVLR Unmodified 1672.9148 0.91482039 1427 P21278 Gna11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 0 0 0 0 10.5 2.5 1 1 70.519 70.519 2 5.3751E-25 23725 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.54 91.336 30.044 0 0 0 27.961 38.644 28 0 0 0 28 37 1 0 0 0 1 1 3885.6 9172 1427 8838 21431;21432 24725;24726 24725 2 IAVAAQNCYK Unmodified 1136.5648 0.56482866 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 0 0 0 9.12 3.44 1 1 2 1 1 1 1 50.761 50.761 2;3 3.1979E-11 13481 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 162.5 121.47 570.97 821.78 729.54 686.67 1188.6 992.56 536 820 720 665 1196 953 3 6 4 6 7 5 387850 9173 1405 8839 21433;21434;21435;21436;21437;21438;21439;21440 24727;24728;24729;24730;24731;24732;24733;24734;24735 24729 9 IAVAAQNCYK Deamidation (N) 1137.5488 0.54884425 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 1 0 0 6.5 0.5 1 1 52.901 52.901 2 3.615E-07 15852 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 144.38 106.65 98.773 70.217 111.2 94.168 45.389 77.589 93 74 111 93 46 74 2 2 2 2 1 2 10692 9174 1405 8839 21441;21442 24736;24737 24737 505 2 IAVGSDADVVIWDPDK Unmodified 1698.8465 0.84646606 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 5 0 1 79.642 79.642 3 1.1769E-05 29992 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.448 56.126 39.295 36.089 37.671 0 0 20.254 37 37 37 0 0 19 1 1 1 0 0 1 3652.5 9175 1850;2212 8840 21443 24738 24738 1 IAVGSDADVVIWDPDKMK Unmodified 1957.9819 0.98191368 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 8.25 2.77 1 2 1 76.759 76.759 3;4 6.8238E-07 27164 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.562 56.028 197.62 93.852 317.07 166.06 180.62 262.43 186 102 306 167 186 250 3 2 4 3 3 3 16976 9176 1850;2212 8841 21444;21445;21446;21447 24739;24740;24741;24742 24741 4 IAVGSDSDLVIWDPDALK Unmodified 1912.9782 0.97820851 836 Q3TT92;E9PWE8;Q62188;D3YUS0 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 10 3 1 1 88.726 88.726 3;4 0.0001135 35040 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.569 33.973 39.701 0 0 9.5698 62.32 0 37 0 0 9 60 0 2 0 0 1 2 0 6599.9 9177 836 8842 21448;21449 24743;24744 24744 2 IAVIGQSLFGQEVYCQLR Unmodified 2080.0775 0.0775454 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 8.5 4.39 1 1 1 1 87.198 87.198 3 7.5018E-36 27663 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.04 133.55 20.387 40.432 0 46.766 48.3 29.848 19 38 0 46 47 28 1 2 0 3 2 1 32846 9178 2633 8843 21450;21451;21452;21453 24745;24746;24747;24748;24749 24747 5 IAVMELFRPK Unmodified 1202.6845 0.68454987 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 1 1 0 1 74.549 74.549 3 0.00046053 25533 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.692 67.438 0 88.312 0 89.009 90.899 66.696 0 83 0 83 93 65 0 1 0 1 1 1 9842.3 9179 1955 8844 21454 24750 24750 1 IAVSIVK Unmodified 728.47963 0.47962569 1804 P70236;A2AGS2 Map2k6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 0 10 0 1 61.153 61.153 2 0.036209 16384 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.32 29.864 88.154 71.259 91.687 94.715 78.151 125.69 83 74 93 93 83 120 1 1 1 1 1 1 82528 9180 1804 8845 21455 24751 24751 1 IAVSKPNGPLADLQSLLQSGAQVR Deamidation (N) 2462.3493 0.34928681 1193 O35405 Pld3 Phospholipase D3 yes yes 0 1 0 1 10 0 1 89.313 89.313 3 7.5053E-10 28951 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.133 62.409 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 2707.4 9181 1193 8846 21456 24752 24752 322 1 IAVSKPNGPLADLQSLLQSGAQVR Unmodified 2461.3653 0.36527122 1193 O35405 Pld3 Phospholipase D3 yes yes 0 0 0 1 11 0 1 85.261 85.261 4 0.0051396 26809 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.13 28.311 0 29.792 0 0 0 59.696 0 28 0 0 0 56 0 1 0 0 0 1 2798.4 9182 1193 8846 21457 24753 24753 1 IAVVGEGR Unmodified 799.4552 0.45520186 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 44.512 44.512 2 0.0012277 12934 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.24 32.973 683.05 422.6 799.43 814.61 297.02 836.86 643 437 799 794 307 793 3 2 3 3 1 3 105770 9183 1263 8847 21458;21459;21460 24754;24755;24756 24754 3 IAVYSCPFDGMITETK Unmodified 1830.8532 0.85320769 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7.5 0.5 1 1 78.827 78.827 3 0.00018512 27444 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.513 39.051 97.59 90.49 112.54 36.753 93.593 58.13 92 93 111 37 93 56 2 2 2 1 2 1 4118.6 9184 1543 8848 21461;21462 24757;24758;24759 24759 3 IAWAFLK Unmodified 847.49561 0.49561011 290 A0A1L1SQE2;E9QP54;Q8K3E5 Ahi1 Jouberin yes no 0 0 0 0 1 0 1 82.665 82.665 2 0.03053 29070 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.41 56.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9185 290 8849 21463 24760 24760 1 IAWTHITIPESLK Unmodified 1507.8399 0.83986454 2503 Q8C5G6;Q9QZ06;F7AT44;A9JEI5 Tollip Toll-interacting protein yes no 0 0 0 0 9 0 1 72.921 72.921 3 0.0014951 24034 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.162 40.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9186 2503 8850 21464 24761 24761 1 IAYPLGLATLGATVCYPAQSVIIAK Unmodified 2589.424 0.42403166 594 B1AV14;Q78IK4 Apool MICOS complex subunit Mic27 yes no 0 0 0 0 12 0 1 95.628 95.628 4 0.0016682 27392 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.67 32.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3284.2 9187 594 8851 21465 24762 24762 1 ICDDELILIK Unmodified 1230.653 0.65297497 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 9.5 3.57 1 1 2 77.181 77.181 2;3 2.1805E-05 28927 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.55 67.587 69.443 20.216 50.704 50.278 37.714 28.772 65 19 47 46 37 28 2 1 1 1 1 1 15130 9188 1356 8852 21466;21467;21468;21469 24763;24764;24765;24766 24763 4 ICDEITGR Unmodified 962.44913 0.4491302 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 4 0 1 47.651 47.651 2 0.010536 15134 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.093 48.978 79.032 73.407 0 0 0 69.29 74 74 0 0 0 65 1 1 0 0 0 1 11155 9189 1994 8853 21470 24767 24767 1 ICDPGLTSFEPEALGNLVEGMDFHK Unmodified 2775.2884 0.28840239 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YCH4;A0A286YCI7 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 6 0 1 92.537 92.537 4 0.020166 34995 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.585 23.936 0 0 0 20.424 18.258 19.733 0 0 0 19 19 19 0 0 0 1 1 1 2174.9 9190 2818 8854 21471 24768 24768 1 ICDPGLTSFEPEALGNLVEGMDFHR Unmodified 2803.2946 0.2945504 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 8 3.56 1 1 1 91.511 91.511 3;4 6.7517E-23 34661 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.733 71.747 56.237 58.031 77.583 0 28.62 79.133 53 59 75 0 28 75 3 3 3 0 1 3 25350 9191 1475 8855 21472;21473;21474 24769;24770;24771;24772 24769 4 ICDQWDNLGALTQK Unmodified 1660.7879 0.78790532 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 10 3 1 1 75.806 75.806 3 0.0001015 28737 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.548 55.72 119.26 65.13 98.347 143.83 118.69 144.79 112 65 93 139 120 139 2 1 1 2 1 2 19961 9192 418 8856 21475;21476 24773;24774 24774 2 ICDQWDNLGSLTHSR Unmodified 1800.8213 0.82133071 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 7 0 1 63.492 63.492 3 0.033804 20873 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 34.87 25.588 0 0 68.319 45.143 56.502 0 0 0 65 46 56 0 0 0 1 1 1 0 3563.3 9193 310 8857 21477 24775 24775 1 ICEEAFTR Unmodified 1024.4648 0.46478027 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 5 0 1 50.133 50.133 2 0.054821 16079 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.679 40.777 127.25 157.53 119.75 0 141.8 104.69 120 158 120 0 139 102 1 1 1 0 1 1 10572 9194 2074 8858 21478 24776 24776 1 ICEQFEAETPTDSEATQR Unmodified 2110.9113 0.91132751 2683 Q8VCI5 Pex19 Peroxisomal biogenesis factor 19 yes yes 0 0 0 0 2.5 0.5 1 1 55.601 55.601 3 3.7225E-07 19251 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.899 68.288 9.657 9.576 0 9.4903 18.431 49.576 9 9 0 9 19 47 1 1 0 1 1 2 5461.1 9195 2683 8859 21479;21480 24777;24778 24778 2 ICEVINEAVWK Unmodified 1359.6857 0.68567208 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 79.618 79.618 3 0.0242 27888 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.788 19.871 20.093 58.229 0 0 0 39.442 19 56 0 0 0 37 1 1 0 0 0 1 2598.4 9196 2178 8860 21481 24779 24779 1 ICFVNDPRPQHK Unmodified 1509.7511 0.7510663 2626 Q8R016;E9PY26 Blmh Bleomycin hydrolase yes no 0 0 0 1 8 0 1 45.815 45.815 4 0.0098911 11973 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.149 27.27 108.69 150.14 0 101.65 0 127.92 102 148 0 93 0 120 1 1 0 1 0 1 4948.7 9197 2626 8861 21482 24780 24780 1 ICGDIHGQYTDLLR Unmodified 1659.8039 0.80388973 1711 P62141 Ppp1cb Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 0 0 6.5 0.5 1 1 60.878 60.878 3 1.6694E-22 20497 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.39 115.96 138.64 67.966 183.24 54.166 63.184 185.81 130 74 176 56 65 176 1 1 2 1 1 2 21412 9198 1711 8862 21483;21484 24781;24782 24781 2 ICGDIHGQYYDLLR Unmodified 1721.8195 0.8195398 1710;1770 P62137;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 9.5 3.5 1 1 64.157 64.157 3 7.7539E-05 21917 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.156 53.06 48.95 25.71 46.743 27.818 0 39.442 46 28 46 28 0 37 1 1 1 1 0 1 13175 9199 1710;1770 8863 21485;21486 24783;24784 24783 2 ICLDILK Unmodified 873.49937 0.49937486 1688 P61089;A0A087WPV1;Q9CQ37 Ube2n;Ube2t Ubiquitin-conjugating enzyme E2 N;Ubiquitin-conjugating enzyme E2 T yes no 0 0 0 0 10.7 1.7 1 1 1 74.819 74.819 2 0.027111 28205 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.041 20.012 325.4 208.96 136.66 339.52 460.32 335.45 305 211 139 326 466 327 3 2 1 3 3 3 121720 9200 1688 8864 21487;21488;21489 24785;24786;24787 24787 3 ICLDILKDK Unmodified 1116.6213 0.62128091 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 1 10 0 1 69.649 69.649 3 0.02628 20352 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.532 20.341 88.789 53.597 0 0 102.4 125 83 56 0 0 102 120 1 1 0 0 1 1 12999 9201 1688 8865 21490 24788 24788 1 ICNQVLVCER Unmodified 1289.622 0.62202597 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 7 0 1 51.645 51.645 2 0.0012794 15269 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.636 57.45 0 69.16 0 0 67.99 0 0 65 0 0 65 0 0 1 0 0 1 0 7567.9 9202 3397 8866 21491 24789 24789 1 ICQEVLPK Unmodified 985.52665 0.52665224 1238 O55126;Q7TMG8;A0A0G2JEV1 Gbas Protein NipSnap homolog 2 yes no 0 0 0 0 10 3 1 1 56.391 56.391 2 0.012807 17643 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.37 37.024 226.3 158.35 244.18 133.29 0 236.65 213 167 241 130 0 222 2 2 2 1 0 2 30862 9203 1238 8867 21492;21493 24790;24791 24790 2 ICQGCPHR Unmodified 1026.4488 0.44875305 1813 Q4FE56;P70398;F8VPU6 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 7 0 1 25.961 25.961 3 0.045968 4011 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.395 28.513 0 0 15.148 0 0 24.518 0 0 14 0 0 23 0 0 1 0 0 1 625.07 9204 1813 8868 21494 24792 24792 1 ICSFEEAK Unmodified 982.44298 0.44298219 811 E0CZ78;P48453;G3X8U7 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 6.5 0.5 1 1 55.148 55.148 2 0.0061559 17825 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.12 67.089 137.47 107.69 68.563 99.374 187.33 47.142 129 111 65 93 185 46 2 2 1 1 2 1 14300 9205 811 8869 21495;21496 24793;24794 24793 2 ICTASENFLR Unmodified 1209.5812 0.58120701 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 0 8.17 2.41 2 1 1 1 1 58.237 58.237 2;3 9.0959E-14 18452 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 170.69 120.73 394.43 311.33 195.06 236.66 412.83 393.3 370 314 195 232 417 380 4 4 2 3 4 5 217770 9206 1526 8870 21497;21498;21499;21500;21501;21502 24795;24796;24797;24798;24799;24800 24797 6 ICYAINLGK Unmodified 1050.5532 0.55320134 2611 Q8K3G9;H3BJX0 Appl2 DCC-interacting protein 13-beta yes no 0 0 0 0 10 0 1 67.513 67.513 2 0.012984 19342 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.032 23.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9207 2611 8871 21503 24801 24801 1 IDALNTEELR Unmodified 1172.6037 0.60371659 2028 Q4KMM3;A0A2R8VHT3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 4.5 0.5 1 1 59.899 59.899 2 0.00014019 20974 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.48 56.321 49.176 84.375 37.135 71.045 75.794 125.76 46 83 37 65 74 120 1 2 1 1 1 2 13753 9208 2028 8872 21504;21505 24802;24803 24802 2 IDAMHGVVGPYVK Unmodified 1384.7173 0.71730656 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 8 0 1 62.084 62.084 3 6.9374E-05 19583 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.191 71.313 49.128 45.631 0 0 75.098 67.147 46 46 0 0 74 65 1 1 0 0 1 1 7643.6 9209 3022 8873 21506 24804 24804 1 IDAYEVVEGSNDEVDK Unmodified 1780.8003 0.80030372 45 A0A0A0MQC2;B1AS67;Q66T02 Plekhg5 Pleckstrin homology domain-containing family G member 5 yes no 0 0 0 0 3 0 1 67.189 67.189 3 0.0035361 24593 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.567 26.465 20.081 27.975 27.665 19.118 0 9.594 19 28 28 19 0 9 1 1 1 1 0 1 1561.2 9210 45 8874 21507 24805 24805 1 IDCNLLEFK Unmodified 1150.5692 0.56924534 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 7 1 1 1 75.463 75.463 3 0.003858 25809 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.347 48.715 89.855 54.9 0 39.601 73.945 47.762 84 56 0 37 74 46 2 1 0 1 2 1 10591 9211 3376 8875 21508;21509 24806;24807 24807 2 IDDIFER Unmodified 906.4447 0.44469675 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7 3.54 1 1 1 1 65.955 65.955 2 0.027043 23609 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.308 54.428 153.54 186.48 63.847 51.938 143.78 135.35 144 186 65 51 139 129 2 3 1 1 2 2 72836 9212 2148 8876 21510;21511;21512;21513 24808;24809;24810;24811 24808 4 IDDIKEANK Unmodified 1044.5451 0.54513908 2664 Q8R4C2 Rufy2 RUN and FYVE domain-containing protein 2 yes yes 0 0 0 1 1 0 1 87.068 87.068 3 0.05208 31212 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.909 2.9709 0 0 48.098 37.574 0 59.696 0 0 46 37 0 56 0 0 1 1 0 1 4041 9213 2664 8877 21514 24812 24812 1 IDDIVSGHK Unmodified 982.50836 0.50835964 1827 P80318;E9Q133;F6ZVG8 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 6.5 1.12 1 1 1 1 52.235 52.235 3 0.0017954 16348 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.465 53.036 158.01 55.995 85.916 165.16 357.36 94.385 148 56 84 157 352 92 3 1 2 3 4 2 20387 9214 1827 8878 21515;21516;21517;21518 24813;24814;24815;24816 24814 4 IDDLQMVLNQTEDHR Unmodified 1825.8629 0.86286118 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 5.5 0.5 1 1 72.03 72.03 3 3.046E-30 26296 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 157.68 129.59 119.43 104.55 74.208 37.408 74.705 67.994 112 107 74 37 74 65 2 3 2 1 2 2 46476 9215 1151 8879 21519;21520 24817;24818;24819 24817 3 IDDPIYGTYYVDHINR Unmodified 1952.9268 0.92684164 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 5 0 1 65.662 65.662 3 0.028759 23306 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.136 24.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9216 87 8880 21521 24820 24820 1 IDEANQR Unmodified 844.40389 0.40389457 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 30.266 30.266 2 1.5311E-15 6680 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.95 62.029 1493.3 1035.7 1136.9 1026.8 1864.3 1877.3 1402 1068 1141 1011 1889 1811 3 3 2 2 4 4 338160 9217 1681 8881 21522;21523;21524;21525 24821;24822;24823;24824 24824 4 IDEAVLITWTK Unmodified 1287.7075 0.70745338 1055 G3UVV4;P17710;D3YYR4;D3Z365;D3Z105 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9.67 2.43 1 2 1 2 83.892 83.892 2;3 1.1103E-21 32676 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 179.67 128.79 238.22 158.21 185.6 275.45 185.16 185.22 223 157 176 260 186 176 5 3 3 5 4 4 101130 9218 1055 8882 21526;21527;21528;21529;21530;21531 24825;24826;24827;24828;24829;24830;24831 24831 7 IDELIEETVK Unmodified 1187.6285 0.62853436 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 5 0 1 82.858 82.858 2 0.013812 31577 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.353 19.369 29.987 0 9.5868 0 0 20.254 28 0 9 0 0 19 1 0 1 0 0 1 1528 9219 2301 8883 21532 24832 24832 1 IDELPEGAVKPPANK Unmodified 1576.8461 0.84607213 3252 Q9JMG7 Hdgfrp3 Hepatoma-derived growth factor-related protein 3 yes yes 0 0 0 1 6 1 1 1 58.192 58.192 4 0.0017329 18377 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.09 34.251 0 29.792 0 60.018 63.245 106.93 0 28 0 56 65 102 0 1 0 1 1 2 5750.6 9220 3252 8884 21533;21534 24833;24834 24834 2 IDELSLYSVPEGQSK Unmodified 1663.8305 0.83048164 3158 Q9DCZ4 Apoo Apolipoprotein O yes yes 0 0 0 0 5 0 1 73.128 73.128 3 6.5502E-05 26776 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.939 58.255 0 0 40.034 0 27.631 48.248 0 0 37 0 28 46 0 0 1 0 1 1 7487.2 9221 3158 8885 21535 24835 24835 1 IDEMPEAAVK Unmodified 1101.5376 0.53761086 1605 P51859 Hdgf Hepatoma-derived growth factor yes yes 0 0 0 0 4.5 0.5 1 1 59.426 59.426 3 0.0013651 20560 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.349 36.628 50.194 46.934 0 20.767 57.53 20.254 47 46 0 19 55 19 2 1 0 1 1 1 6239.1 9222 1605 8886 21536;21537 24836;24837 24837 2 IDEPLEGSEDR Unmodified 1258.5677 0.56772501 613 B2M1R6;P61979;H3BLL4 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 4.75 4.82 1 1 1 1 49.039 49.039 2 1.3105E-96 14747 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 235.32 176.89 533.42 372.7 729.28 506.03 697.49 632.23 501 376 718 502 705 609 4 6 7 6 6 5 429980 9223 613 8887 21538;21539;21540;21541 24838;24839;24840;24841;24842;24843;24844 24839 7 IDESSLTGESDHVK Unmodified 1515.7053 0.70528113 1096;928 G5E829;A0A1W2P7C7;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase no no 0 0 0 0 4 0 2 50.747 50.747 3;4 7.9652E-05 16625 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.457 62.32 178.73 91.603 0 49.042 65.737 178.02 167 93 0 46 65 167 2 1 0 1 1 1 17778 9224 1096;928 8888 21542;21543 24845;24846 24846 2 IDESSLTGESDHVKK Unmodified 1643.8002 0.80024414 1096;928 G5E829;A0A1W2P7C7;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase no no 0 0 0 1 5 0 1 49.436 49.436 4 2.8149E-05 15761 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.943 67.97 108.13 89.233 145.2 202.92 82.949 145.81 102 93 148 195 93 139 1 1 1 1 1 1 12093 9225 1096;928 8889 21544 24847 24847 1 IDESSLTGESDHVR Unmodified 1543.7114 0.71142914 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 2.5 0.5 1 1 46.345 46.345 3 6.19E-25 14964 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 145 124.62 49.084 20.216 46.073 77.475 63.764 19.437 46 19 46 74 65 19 1 1 1 1 2 1 22423 9226 487 8890 21545;21546 24848;24849 24849 2 IDESSLTGESDQVR Unmodified 1534.7111 0.71109479 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 5 4.05 1 2 1 1 53.063 53.063 2;3 2.6413E-68 17994 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 211.63 138.13 129.11 54.047 76.392 66.965 27.961 88.746 121 56 74 65 28 84 4 3 2 2 1 3 50991 9227 1042 8891 21547;21548;21549;21550;21551 24850;24851;24852;24853;24854 24852 5 IDESSLTGESDQVRK Unmodified 1662.8061 0.8060578 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 1 4 0 1 51.018 51.018 3 0.012953 16800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.084 10.13 49.358 0 0 0 0 29.848 46 0 0 0 0 28 1 0 0 0 0 1 3027.8 9228 1042 8892 21552 24855 24855 1 IDEVEEMLTNNR Deamidation (N) 1462.661 0.66097347 2754 Q91WD5 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 0 1 0 0 4 0 2 78.873 78.873 3 0.00019279 28940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.695 52.459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9229 2754 8893 21553;21554 24856;24857 24856 988 2 IDEVEEMLTNNR Unmodified 1461.677 0.67695789 2754 Q91WD5 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes yes 0 0 0 0 5 0 1 78.275 78.275 3 0.00041022 29360 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.519 52.547 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 4343.6 9230 2754 8893 21555 24858 24858 1 IDFGDSAR Unmodified 879.40865 0.4086456 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 5.5 0.5 1 1 50.801 50.801 2 0.0013051 15688 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.79 63.644 0 116.98 105.43 171.84 176.2 0 0 111 111 166 176 0 0 1 2 2 2 0 30055 9231 622 8894 21556;21557 24859;24860 24860 2 IDFHNPDR Unmodified 1012.4726 0.47264284 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 5.5 0.5 1 1 41.684 41.684 3 0.0046464 11415 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.064 48.583 69.193 43.342 56.027 36.272 44.113 114.03 65 46 56 37 46 111 1 1 1 1 1 2 9749.2 9232 1255 8895 21558;21559 24861;24862 24862 2 IDFVGELNDK Unmodified 1148.5714 0.57135383 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 6.5 0.5 1 1 72.577 72.577 2;3 5.6523E-05 25993 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.39 30.32 127.85 138.67 35.953 117.84 71.441 67.251 120 139 37 111 74 65 2 2 1 2 1 1 12651 9233 1899 8896 21560;21561 24863;24864 24863 2 IDFYFDENPYFENK Unmodified 1839.7992 0.79918151 537 Q9EQU5;A2BE93;A2BE92 Set Protein SET yes no 0 0 0 0 8.67 3.09 1 1 1 86.578 86.578 3 3.3181E-07 32438 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.14 81.274 99.563 44.908 30.296 19.859 163.74 48.478 93 46 28 19 159 47 2 1 1 1 3 1 19084 9234 537 8897 21562;21563;21564 24865;24866;24867 24865 3 IDGITIQAR Unmodified 985.55564 0.55564418 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 56.55 56.55 2 8.0193E-18 17699 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 182.73 57.722 646.95 433.88 725.5 519.93 803.57 759.51 609 453 719 522 816 734 4 3 4 3 4 4 113680 9235 551 8898 21565;21566;21567;21568 24868;24869;24870;24871 24869 4 IDHYLGK Unmodified 844.4443 0.44430282 1869 Q00612;A3KG36 G6pdx Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 0 7.5 0.5 1 1 51.343 51.343 3 0.015517 15182 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.344 35.266 29.684 88.312 60.442 99.968 135.48 154.97 28 83 56 93 139 149 1 1 1 1 2 2 7855.5 9236 1869 8899 21569;21570 24872;24873 24872 2 IDIDPEETVK Unmodified 1157.5816 0.58158416 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 3.5 0.5 1 1 63.616 63.616 2 7.8586E-05 22525 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.86 45.3 49.358 20.216 0 40.441 0 59.696 46 19 0 37 0 56 1 1 0 1 0 2 10417 9237 1621 8900 21571;21572 24874;24875 24875 2 IDIIPNPQER Unmodified 1193.6404 0.64043645 1354 P11499;E9PX27 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 7.75 3.11 1 1 1 1 62.169 62.169 2 4.8891E-05 21276 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.4 56.812 848.78 530.71 445.1 690.66 897.81 1031.9 796 538 435 660 912 992 8 5 5 5 7 8 153590 9238 1354 8901 21573;21574;21575;21576 24876;24877;24878;24879;24880;24881;24882;24883 24879 8 IDILDSALLRPGR Unmodified 1437.8304 0.83036248 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 1 9.5 0.5 1 1 75.891 75.891 3 1.0409E-13 25377 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.36 96.13 78.984 131.17 45.229 127.8 35.349 126.91 74 129 46 120 37 120 1 2 1 2 1 2 28274 9239 1713 8902 21577;21578 24884;24885 24884 2 IDILTELR Unmodified 971.56515 0.56514624 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 7 0.816 1 1 1 63.554 63.554 2;3 0.020548 26901 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.923 23.373 59.742 48.944 58.19 47.165 161.14 56.976 56 46 56 46 158 56 2 1 2 1 3 1 73719 9240 810 8903 21579;21580;21581 24886;24887;24888 24888 3 IDIPPGAVLENK Unmodified 1264.7027 0.70270235 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 6.33 0.471 2 1 69.846 69.846 3 0.0050973 24672 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.013 21.666 20.195 38.006 0 49.624 34.772 48.044 19 37 0 46 37 46 1 1 0 1 1 1 2339.5 9241 2783 8904 21582;21583;21584 24889;24890;24891 24889 3 IDIPSFDWPIAPFPR Unmodified 1769.9141 0.91409211 1702 P61922;F7C9G3 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 9.8 1.72 1 2 1 1 98.097 98.097 3;4 5.1916E-42 35161 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 180.84 154.72 44.664 136.67 125.89 111.86 147 29.848 42 134 125 111 145 28 2 4 3 5 5 1 119750 9242 1702 8905 21585;21586;21587;21588;21589 24892;24893;24894;24895;24896;24897;24898;24899;24900;24901 24895 10 IDIVENR Unmodified 857.46068 0.46068117 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 5 0 1 51.162 51.162 2 0.018664 16630 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.92 16.248 177.98 124.69 97.4 102.95 145.46 134.43 167 130 102 102 148 130 1 1 1 1 1 1 31009 9243 1393 8906 21590 24902 24902 1 IDIVTLLEGPIFDYGNISGTR Unmodified 2292.2002 0.20016296 3450;8 A0A087WNU5;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R208;S4R278 Ank3 Ankyrin-3 no no 0 0 0 0 10 1.87 1 1 1 1 110.68 110.68 3 1.9606E-11 37660 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.016 57.569 6.386 9.0361 8.039 11.807 9.0111 6.3095 6 9 8 11 9 6 2 3 2 2 2 2 3933.4 9244 8;3450 8907 21591;21592;21593;21594 24903;24904;24905;24906 24904 4 IDKLMIEMDGTENK Deamidation (N) 1636.7688 0.76880936 1398 P17182;Q6PHC1;B0QZL1;B1ARR7 Eno1 Alpha-enolase;Enolase yes no 0 1 0 1 13 0 1 71.802 71.802 3 0.016831 26850 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.606 27.319 187.41 72.655 180.68 148.33 141.69 183.57 176 83 178 148 148 176 1 1 1 1 1 1 8718.6 9245 1398 8908 21595 24907 24907 484 1 IDKTDYMVGSYGPR Unmodified 1600.7555 0.75554256 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 1 10.5 2.5 1 1 57.757 57.757 3 1.3186E-10 19904 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.35 98.209 352.93 0 195.06 310.4 312.59 320.47 330 0 185 300 323 309 2 0 1 2 2 2 31421 9246 2889 8909 21596;21597 24908;24909 24909 2 IDLAVLLGK Unmodified 940.59572 0.59571809 83 A0A0H2UH17;A0A0G2JDV6;Q80X50 Ubap2l Ubiquitin-associated protein 2-like yes no 0 0 0 0 11 0 1 89.663 89.663 3 0.042504 28699 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.876 25.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2014.4 9247 83 8910 21598 24910 24910 1 IDLPEYQGEPDEISIQK Unmodified 1972.963 0.96295238 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 0 6.6 3.26 1 2 1 1 74.135 74.135 3;4 7.1591E-07 27259 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.013 62.875 148.93 119.68 201.52 161.36 183.2 114.96 140 121 195 158 186 111 4 3 4 4 4 2 30741 9248 3089 8911 21599;21600;21601;21602;21603 24911;24912;24913;24914;24915;24916 24911 6 IDLPNEEVK Unmodified 1055.5499 0.5498901 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 6.4 3.38 2 1 1 1 59.444 59.444 2;3 0.0020677 19870 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.665 33.506 80.238 69.16 104.88 208.31 198.26 161.7 75 65 102 194 204 157 2 1 2 3 3 3 36962 9249 927 8912 21604;21605;21606;21607;21608 24917;24918;24919;24920;24921 24920 5 IDLRPVLGEGVPILASFLR Unmodified 2064.2095 0.20954585 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 7.6 5.43 2 1 1 1 102.03 102.03 3;4 1.6485E-07 33527 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.407 86.914 47.966 24.913 56.416 124.79 48.738 63.784 45 24 55 123 51 61 2 3 3 3 3 3 39111 9250 2264 8913 21609;21610;21611;21612;21613 24922;24923;24924;24925;24926;24927;24928 24925 7 IDLYDVR Unmodified 892.46543 0.46543219 882;916 O08532;E9Q1X8;E9Q683;Q6PHS9 Cacna2d1;Cacna2d2 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1;Voltage-dependent calcium channel subunit alpha-2/delta-2;Voltage-dependent calcium channel subunit alpha-2-2;Voltage-dependent calcium channel subunit delta-2 no no 0 0 0 0 5 0 1 61.037 61.037 2 0.059683 21168 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.975 13.681 0 29.017 46.382 37.019 34.986 58.698 0 28 46 37 37 56 0 1 1 1 1 1 3611.4 9251 882;916 8914 21614 24929 24929 1 IDNSQVESGSLEDDWDFLPPK Unmodified 2390.0914 0.091400367 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 6.75 3.63 1 2 1 85.187 85.187 3;4 1.6641E-07 33361 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.87 50.257 9 20.216 20.558 0 19.564 57.884 9 19 19 0 19 56 1 1 1 0 1 3 5900.2 9252 1375 8915 21615;21616;21617;21618 24930;24931;24932;24933;24934 24934 5 IDNSQVESGSLEDDWDFLPPKK Unmodified 2518.1864 0.18636339 1375 P14211 Calr Calreticulin yes yes 0 0 0 1 5.33 0.471 2 1 77.618 77.618 4;5 9.3848E-13 28365 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.975 63.734 48.644 162.04 166.88 110.71 35.626 77.867 46 158 168 111 37 74 1 4 4 4 1 2 19834 9253 1375 8916 21619;21620;21621 24935;24936;24937;24938 24938 4 IDNYIPIF Unmodified 993.51713 0.51713341 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 97.298 97.298 2 0.017966 35853 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.451 56.621 108.44 65.625 163.96 56.409 130.34 127.67 102 65 158 56 129 121 2 1 3 1 2 2 173360 9254 1606 8917 21622;21623;21624;21625 24939;24940;24941;24942 24939 4 IDPNPVDSQSTPSE Unmodified 1484.6631 0.66308196 2395 Q8BH58 Tiprl TIP41-like protein yes yes 0 0 0 0 2.5 0.5 1 1 57.035 57.035 2 0.00023474 19831 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.911 87.082 14.275 0 15.121 0 14.145 14.52 14 0 14 0 14 14 2 0 1 0 1 1 10485 9255 2395 8918 21626;21627 24943;24944 24944 2 IDPSAPLDK Unmodified 954.50221 0.50221163 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 8 3.56 1 1 1 58.086 58.086 2 0.012187 19902 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.643 29.774 39.468 125.02 0 30.604 113.84 66.042 37 120 0 28 111 65 1 2 0 1 1 1 11159 9256 1474 8919 21628;21629;21630 24945;24946;24947 24945 3 IDPSTLQMWANILK Unmodified 1628.8596 0.8596137 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 11 1 1 1 101.12 101.12 3 2.9923E-05 28628 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.287 42.862 20.387 29.681 6.6343 42.528 64.356 19.476 19 28 9 40 65 19 1 1 1 2 3 1 5640.6 9257 2543 8920 21631;21632 24948;24949;24950 24950 3 IDQEIHK Unmodified 881.46068 0.46068117 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 5 0 1 44.048 44.048 3 0.02687 13092 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.8 19.798 69.049 63.447 63.238 65.933 71.407 86.44 65 65 65 65 74 83 1 1 1 1 1 1 2934.1 9258 970 8921 21633 24951 24951 1 IDQLECDHQLIQEALIFDNK Unmodified 2441.1897 0.18967462 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 5.5 0.5 1 1 85.614 85.614 4 7.4126E-11 31909 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.094 78.788 129.7 25.749 0 70.382 35.225 57.625 121 28 0 65 37 55 2 1 0 2 1 2 12083 9259 418 8922 21634;21635 24952;24953 24953 2 IDQLQEELLHTQLK Unmodified 1706.9203 0.9202997 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 6.5 0.5 1 1 76.41 76.41 3 4.6538E-05 27766 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.836 51.536 217.92 60.62 112.28 132.24 110.03 0 204 65 111 129 111 0 2 1 1 2 2 0 14808 9260 1653 8923 21636;21637 24954;24955 24954 2 IDQYQGADAVGLEEK Unmodified 1634.7788 0.77878042 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 4 0 1 62.401 62.401 2 0.0045821 22117 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.106 31.889 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 2030 9261 2525 8924 21638 24956 24956 1 IDSAATSTYEVGNPPDYR Unmodified 1954.8909 0.89085007 3055 Q9D358;A0A1W2P7X3 Acp1 Low molecular weight phosphotyrosine protein phosphatase yes no 0 0 0 0 4 0 1 57.951 57.951 3 1.1158E-09 20030 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.34 85.8 15 0 0 0 0 0 15 0 0 0 0 0 1 0 0 0 0 0 5356.6 9262 3055 8925 21639 24957 24957 1 IDSAEWGVDLPSVEAQLGSHR Unmodified 2265.1026 0.10257418 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 5 0 1 77.138 77.138 3 0.003558 28697 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.381 24.439 9.535 0 20.51 0 9.414 0 9 0 19 0 9 0 1 0 1 0 1 0 1960.4 9263 3266 8926 21640 24958 24958 1 IDSGELDPER Unmodified 1129.5251 0.52513192 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B yes yes 0 0 0 0 3 0 1 50.283 50.283 2 0.007097 16763 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.977 36.169 0 38.575 47.458 0 0 39.442 0 37 46 0 0 37 0 1 1 0 0 1 8386.4 9264 2785 8927 21641 24959 24959 1 IDSILEVVQTGR Unmodified 1328.73 0.72997974 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 8.5 0.5 1 1 83.41 83.41 2 0.00063137 28784 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.081 39.998 39.295 70.137 37.671 0 104.86 53.314 37 69 37 0 102 51 1 2 1 0 2 1 7508.6 9265 3241 8928 21642;21643 24960;24961 24961 2 IDSISSLTK Unmodified 962.52843 0.52842638 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 8 0.816 1 1 1 63.848 63.848 2 0.0014401 19654 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.07 25.241 225.37 173.1 331.59 167.31 238.84 232 212 175 324 167 232 222 3 3 4 3 2 3 17685 9266 3192 8929 21644;21645;21646 24962;24963;24964;24965 24965 4 IDSLLESDR Unmodified 1046.5244 0.52440364 1890 Q06890;E9PUU2;E9PXG5;E9Q8Y5;E9Q9B8 Clu Clusterin;Clusterin beta chain;Clusterin alpha chain yes no 0 0 0 0 9 4 1 1 63.723 63.723 2 0.014094 22609 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.504 15.606 109.09 71.38 0 99.606 108.6 85.379 102 74 0 93 111 83 1 1 0 1 1 1 5979.7 9267 1890 8930 21647;21648 24966;24967 24966 2 IDSLMDEIAFLK Unmodified 1393.7163 0.71630351 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 9.25 2.28 1 1 1 1 99.916 99.916 2;3 2.1236E-08 36460 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.86 66.092 152.54 67.041 132.99 69.515 143.21 104.42 143 72 129 69 143 101 3 3 5 4 5 4 28973 9268 1329 8931 21649;21650;21651;21652 24968;24969;24970;24971;24972;24973;24974 24968 7 IDSLSAQLSQLQK Unmodified 1429.7777 0.77765821 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 10 2.16 1 1 1 74.921 74.921 3 2.351E-05 24856 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.53 72.574 157.78 115.8 74.222 144.56 156.31 67.502 148 120 74 139 158 65 2 2 1 2 2 1 25437 9269 1580 8932 21653;21654;21655 24975;24976;24977 24976 3 IDSNLDELSVGLGHLK Unmodified 1708.8996 0.89956426 3182 Q9ERB0 Snap29 Synaptosomal-associated protein 29 yes yes 0 0 0 0 6 0 1 75.358 75.358 3 0.00013869 27325 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.692 41.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9270 3182 8933 21656 24978 24978 1 IDSVLLTHIGADNLPGINGLLQR Deamidation (N) 2429.3278 0.32782309 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 9.25 2.17 3 1 90.999 90.999 3;4 1.5405E-25 32143 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.195 85.79 0 29.468 19.365 0 0 9.594 0 28 19 0 0 9 0 2 1 0 0 1 1842 9271 510 8934 21657;21658;21659;21660 24979;24980;24981;24982 24981 135;136 4 IDSVLLTHIGADNLPGINGLLQR 2 Deamidation (N) 2430.3118 0.31183867 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 2 0 0 8 0 1 90.396 90.396 4 0.000629 33046 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.229 30.365 0 0 0 61.208 0 20.254 0 0 0 56 0 19 0 0 0 1 0 1 1713.9 9272 510 8934 21661 24983 24983 135;136 1 IDSVLLTHIGADNLPGINGLLQR Unmodified 2428.3438 0.3438075 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 9 0 1 89.344 89.344 4 0.0074849 31522 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.794 17.109 29.974 13.939 0 24.046 0 0 28 15 0 22 0 0 1 1 0 1 0 0 3327.2 9273 510 8934 21662 24984 24984 1 IDSVSLVDYTPTDQDLLR Unmodified 2049.0266 0.026615266 2540 Q8CGK7;Q66L47 Gnal Guanine nucleotide-binding protein G(olf) subunit alpha yes no 0 0 0 0 5 0 1 81.665 81.665 3 0.048178 30958 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.582 11.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9274 2540 8935 21663 24985 24985 1 IDSVWPFEK Unmodified 1119.5601 0.56006086 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 9.33 2.62 1 1 1 80.209 80.209 2;3 0.0032071 28092 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.584 42.79 39.407 55.495 135.44 58.23 197.71 114.56 37 56 130 56 194 112 1 2 3 2 3 3 18548 9275 2162 8936 21664;21665;21666 24986;24987;24988;24989 24987 4 IDTHNIIVNQLVFPDPEKPCK Unmodified 2476.2784 0.27843005 1224 O54984 Asna1 ATPase Asna1 yes yes 0 0 0 1 8 0 1 72.932 72.932 4 0.004934 24663 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.756 29.015 39.079 55.995 57.035 0 0 49.036 37 56 56 0 0 46 1 1 1 0 0 1 3089.9 9276 1224 8937 21667 24990 24990 1 IDTIAADESFTQVDIGDR Unmodified 1964.9327 0.93271488 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 4 0 1 75.095 75.095 3 1.6308E-05 27691 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.243 49.168 9.4847 0 28.962 28.878 0 29.848 9 0 28 28 0 28 1 0 1 1 0 1 3756.3 9277 1880 8938 21668 24991 24991 1 IDTIEIITDR Unmodified 1187.6398 0.63976774 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 7 3.16 1 1 1 1 1 72.311 72.311 2;3 5.5582E-05 26972 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.88 66.488 567.49 427.38 468.48 556.81 465.92 472.8 533 445 476 543 475 456 4 6 4 5 2 4 91688 9278 1271 8939 21669;21670;21671;21672;21673 24992;24993;24994;24995;24996;24997 24997 6 IDVAGFSALWK Unmodified 1205.6445 0.64445919 2364 Q8BFY6 Pef1 Peflin yes yes 0 0 0 0 12 1 1 1 87.858 87.858 3 0.00026026 28114 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.298 48.664 50.31 0 57.407 30.256 18.484 0 47 0 56 28 19 0 2 0 2 1 1 0 10158 9279 2364 8940 21674;21675 24998;24999;25000 24999 3 IDVGEAEPR Unmodified 984.48762 0.4876242 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 3 0 1 46.632 46.632 2 3.2858E-07 15083 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.41 51.032 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9280 432 8941 21676 25001 25001 1 IDVSVEAASGGK Unmodified 1131.5772 0.57716749 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 10 3 1 1 56.717 56.717 3 0.00041022 19613 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.519 32.987 88.238 61.778 85.655 0 125.52 0 83 65 83 0 120 0 1 1 1 0 1 0 18154 9281 1164 8942 21677;21678 25002;25003 25003 2 IDYGTGHEAAFAAFLCCLCK Unmodified 2303.0173 0.017329683 1654 P58389;A2AWE9 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 8 0 1 84.639 84.639 3 0.014134 30252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.883 23.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9282 1654 8943 21679 25004 25004 1 IEAACFATIK Unmodified 1122.5743 0.57433072 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 8 0.816 1 1 1 66.425 66.425 2;3 8.8619E-08 22292 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142.43 84.838 0 165.75 412.04 0 370.8 398.76 0 158 390 0 365 384 0 1 3 0 2 3 82050 9283 307 8944 21680;21681;21682 25005;25006;25007 25005 3 IEAEEAIK Unmodified 901.47566 0.47566253 436 Q61701;A2A9S2;A2A9S0;Q8BVA9;A2A9R6;A2A9R8;A2A9S3;B1AXZ0;Q80UJ0;Q3UR02;B1AXZ5;Q80Y51;B1AXZ6;Q60899;B1AXZ4;A0A1L1SS95;Q60900;A0A1L1SUG6 Elavl4;Elavl2;Elavl3 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2;ELAV-like protein 3 yes no 0 0 0 0 4 0 1 52.678 52.678 2 0.010921 17528 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.531 30.278 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 7523.7 9284 436 8945 21683 25008 25008 1 IEAGIER Unmodified 786.42357 0.42356738 1088 Q61016;G3X9Q2;D3Z483 Gng7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7;Guanine nucleotide-binding protein subunit gamma yes no 0 0 0 0 4.5 0.5 1 1 42.374 42.374 2 0.036462 12291 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.119 22.202 236.14 147.42 221.89 185.79 227.92 181.11 222 157 222 186 232 176 2 2 2 2 2 2 42256 9285 1088 8946 21684;21685 25009;25010 25010 2 IEALGGCVVWFGAWR Unmodified 1719.8555 0.85553137 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 11.7 0.471 1 2 92.329 92.329 2;3 0.00040053 26390 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.298 59.969 0 9 0 0 18.208 48.516 0 9 0 0 19 46 0 1 0 0 1 1 9087.5 9286 2302 8947 21686;21687;21688 25011;25012;25013;25014 25014 4 IEANEALVK Unmodified 985.54441 0.5444108 3060 Q9D3D9 Atp5d ATP synthase subunit delta, mitochondrial yes yes 0 0 0 0 8.5 3.25 1 1 2 2 55.682 55.682 2;3 1.3521E-05 18789 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.53 72.209 1141.9 1064.4 1313.6 1016 1370.9 1393.6 1076 1092 1303 1024 1384 1344 5 5 4 5 5 6 256090 9287 3060 8948 21689;21690;21691;21692;21693;21694 25015;25016;25017;25018;25019;25020 25019 6 IEASLCR Unmodified 847.42219 0.42218717 1778 P63216 Gng3 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 yes yes 0 0 0 0 7.25 3.34 2 1 1 41.61 41.61 2 8.7775E-07 13239 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.08 63.962 357.82 491.67 587.61 461.24 636.96 572.39 337 494 591 465 648 554 1 2 2 2 2 2 88567 9288 1778 8949 21695;21696;21697;21698 25021;25022;25023;25024 25023 4 IEASLQHEITR Unmodified 1295.6834 0.68336389 728 D3YZ62;D3Z4J3;Q99104;F6TDE5;F6Z2S4;B8JK05 Myo5a Unconventional myosin-Va yes no 0 0 0 0 5.5 0.5 1 1 49.837 49.837 3 0.00023851 15878 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.021 58.085 108.78 100.76 25.74 129.63 0 69.29 102 102 28 120 0 65 2 2 1 2 0 1 11195 9289 728 8950 21699;21700 25025;25026 25025 2 IECESAETTEDCIEK Unmodified 1812.7394 0.73935973 2797 Q921I1;E9Q035;F7BAE9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 2 0 1 54.071 54.071 3 3.3733E-17 17965 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130.61 102.03 0 29.165 37.489 17.851 36.233 48.002 0 28 37 19 37 46 0 1 1 1 1 1 7824.4 9290 2797 8951 21701 25027 25027 1 IECESPNR Unmodified 1003.4393 0.4392938 121 A0A0M3HEP7;P70704;A0A0J9YV34 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 6.67 4.5 1 1 1 33.132 33.132 2 0.001259 8407 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.81 107.02 0 48.944 56 40.441 0 0 0 46 56 37 0 0 0 1 1 1 0 0 8107.1 9291 121 8952 21702;21703;21704 25028;25029;25030 25029 3 IEDLGAAMEEALILDNK Unmodified 1843.9237 0.9237301 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 97.229 97.229 3 3.2978E-20 35681 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.25 104.92 34.25 9.576 51.548 38.784 36.402 62.921 32 9 51 37 37 60 2 1 3 3 3 4 14432 9292 551 8953 21705;21706;21707;21708 25031;25032;25033;25034;25035;25036 25031 6 IEDLSQQAQLAAAEK Unmodified 1613.8261 0.82606496 1818 Q60817;P70670 Naca Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 0 5 0 1 67.485 67.485 3 0.0016243 24104 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.591 24.862 49.358 0 0 20.767 0 69.29 46 0 0 19 0 65 1 0 0 1 0 1 9820.6 9293 1818 8954 21709 25037 25037 1 IEDNLPAGEE Unmodified 1085.4877 0.48768378 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 0 2 0 1 57.856 57.856 2 0.0092961 19678 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.563 54.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2363.6 9294 1227 8955 21710 25038 25038 1 IEDPNQFVPLNTNPTEVLEK Unmodified 2296.1587 0.15869207 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 82.241 82.241 3;4 2.0712E-05 30534 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.72 28.432 59.824 18.848 28.402 68.157 92.819 38.684 56 19 28 65 93 37 2 1 1 2 3 1 7113.8 9295 3274 8956 21711;21712;21713;21714 25039;25040;25041;25042 25040 4 IEDSEPHIPLIDDTDAEDDAPTKR Unmodified 2691.2511 0.25114849 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 no no 0 0 0 1 3 0 2 64.629 64.629 4;5 1.9086E-10 23289 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.871 49.369 59.729 9.0786 90.042 0 67.99 0 56 9 84 0 65 0 2 1 3 0 2 0 5676.9 9296 1096 8957 21715;21716 25043;25044;25045 25045 3 IEDSQPHIPLIDDTDLEEDAALK Unmodified 2576.2494 0.24935757 1042 Q3UHH0;F8WHB1;Q9R0K7 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 6.67 4.5 1 1 1 79.823 79.823 3;4 3.5014E-15 29913 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.395 70.338 148.76 18.196 49.422 34.302 19.874 79.95 139 19 46 33 19 75 3 1 1 2 1 2 10176 9297 1042 8958 21717;21718;21719 25046;25047;25048;25049 25048 4 IEDVTPIPSDSTR Unmodified 1428.7096 0.70963822 1716 P62264 Rps14 40S ribosomal protein S14 yes yes 0 0 0 0 6.5 3.77 2 1 1 58.94 58.94 2;3 1.6448E-15 20642 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.86 93.526 39.58 77.475 95.778 0 94.633 77.019 37 74 93 0 93 74 1 1 2 0 2 1 12556 9298 1716 8959 21720;21721;21722;21723 25050;25051;25052;25053 25051 4 IEDYFPEFAR Unmodified 1285.5979 0.59790293 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 7 0 1 79.46 79.46 2 0.047197 28351 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.49 35.164 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 0 2493.1 9299 1772 8960 21724 25054 25054 1 IEEACEIYAR Unmodified 1252.5758 0.57578728 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 6.25 3.96 1 1 1 1 54.266 54.266 2 8.3359E-05 18439 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.52 67.105 196.17 346.01 277.94 263.32 344.94 324.88 185 342 278 259 352 314 2 4 3 3 4 4 50275 9300 3106 8961 21725;21726;21727;21728 25055;25056;25057;25058 25056 4 IEEACEMYTR Unmodified 1300.5428 0.54277259 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 4 0 1 52.158 52.158 3 0.00047613 17263 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.958 70.986 0 29.792 0 20.767 0 0 0 28 0 19 0 0 0 1 0 1 0 0 3965.2 9301 1478 8962 21729 25059 25059 1 IEEDAVER Unmodified 959.45599 0.45598972 3419 yes no 0 0 0 0 1 0 1 26.16 26.16 3 0.0045094 4994 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.478 8.4968 69.745 0 0 61.208 0 88.478 65 0 0 56 0 83 1 0 0 1 0 1 8170 + 9302 3419 8963 21730 25060 25060 1 IEEELGDEAR Unmodified 1159.5357 0.5356966 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 7 6 1 1 50.828 50.828 2 1.8816E-150 16596 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 262.83 133.11 1354.1 1063.6 1624.9 1464.6 2000.6 1554.2 1276 1111 1620 1463 2028 1509 4 4 3 4 4 3 187400 9303 1399 8964 21731;21732 25061;25062;25063;25064 25064 4 IEEELGSK Unmodified 903.45493 0.45492709 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 6.5 3.91 1 1 1 1 53.7 53.7 2 0.0013088 18224 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.01 21.391 2805.6 2476.7 2922.3 2792.7 3227.4 2951.6 2641 2557 2937 2770 3305 2839 5 7 5 6 6 5 662090 9304 1398 8965 21733;21734;21735;21736 25065;25066;25067;25068;25069;25070;25071 25068 7 IEEFVYEK Unmodified 1055.5175 0.51752734 3225 Q9JK48;A0A0G2JEC4 Sh3glb1 Endophilin-B1 yes no 0 0 0 0 6 0 1 68.045 68.045 2 0.020869 23855 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.732 26.823 29.529 36.445 55.741 56.479 74.81 0 28 37 56 56 74 0 1 1 1 1 1 0 2689.9 9305 3225 8966 21737 25072 25072 1 IEEGMDQINK Unmodified 1175.5492 0.54923818 1681 P60879;B0R029;E9Q8A1;B0R030;Q9D3L3;O09044 Snap25;Snap23 Synaptosomal-associated protein 25;Synaptosomal-associated protein;Synaptosomal-associated protein 23 yes no 0 0 0 0 5 0 1 55.961 55.961 2 5.6534E-05 18844 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.38 60.568 69.134 53.969 57.005 0 45.451 77.587 65 56 56 0 46 74 1 1 1 0 1 1 8350.8 9306 1681 8967 21738 25073 25073 1 IEELEGQLDQLTQENR Unmodified 1913.933 0.93304923 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 4 0 1 80.844 80.844 3 0.033216 30393 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.089 14.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9307 553 8968 21739 25074 25074 1 IEELQLIVNDK Unmodified 1312.7238 0.72383172 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 6.5 0.5 1 1 80.172 80.172 3 0.0012594 28677 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.727 32.899 29.844 47.21 47.026 18.978 65.799 38.4 28 47 47 19 65 37 1 2 2 1 2 1 6355.6 9308 1713 8969 21740;21741 25075;25076 25076 2 IEENQKDAENVGR Unmodified 1500.7168 0.71684887 2301 Q80TJ1;K4DI76 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 1 3 0 1 39.191 39.191 3 0.030264 11682 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.79 10.145 59.594 45.243 44.636 47.618 0 0 56 47 46 46 0 0 1 1 1 1 0 0 2820.8 9309 2301 8970 21742 25077 25077 1 IEFDDFEECLLR Unmodified 1584.713 0.71300904 2869 Q99LY9;B1ARW4 Ndufs5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5;NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed yes no 0 0 0 0 6.75 3.63 1 2 1 85.91 85.91 2;3 8.1497E-08 32670 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.15 85.033 109.08 56.265 38.471 68.096 53.763 86.944 102 56 37 65 56 83 3 3 1 3 3 3 20571 9310 2869 8971 21743;21744;21745;21746 25078;25079;25080;25081 25078 4 IEGDETSTEAATR Unmodified 1378.6212 0.62121715 2815 Q923G2;A0A338P6B4;A0A338P6I2 Polr2h DNA-directed RNA polymerases I, II, and III subunit RPABC3 yes no 0 0 0 0 2 0 1 38.556 38.556 2 0.0026238 11194 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.262 33.657 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9311 2815 8972 21747 25082 25082 1 IEGDLVLGGLFPINEK Unmodified 1712.9349 0.93488713 3283 Q9QYS2 Grm3 Metabotropic glutamate receptor 3 yes yes 0 0 0 0 7.5 0.5 1 1 92.41 92.41 3 2.8951E-06 34257 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.317 58.224 29.846 17.902 37.041 29.016 27.286 19.475 28 19 38 28 28 19 1 1 2 1 1 1 3059.2 9312 3283 8973 21748;21749 25083;25084 25083 2 IEGFTNVK Unmodified 906.48108 0.48108226 3357 Q9Z0G0 Gipc1 PDZ domain-containing protein GIPC1 yes yes 0 0 0 0 8 0 1 59.037 59.037 2 0.055638 18166 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.597 16.597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9313 3357 8974 21750 25085 25085 1 IEGLEVLK Unmodified 899.53278 0.53278348 1995 Q3UM45;A0A087WRA7;F6TGJ2 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 0 7 0 1 70.551 70.551 2 0.016077 24206 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.452 23.535 113.73 84.122 110.15 97.244 117.62 100.05 107 88 111 97 120 97 1 1 1 1 1 1 8066.1 9314 1995 8975 21751 25086 25086 1 IEGLLAAFPK Unmodified 1057.6172 0.61718181 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 10 0 1 84.765 84.765 3 0.011459 26960 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.276 33.412 30.044 0 0 0 57.53 0 28 0 0 0 55 0 1 0 0 0 1 0 3888 9315 2073 8976 21752 25087 25087 1 IEGLQSLVNLR Unmodified 1240.7139 0.71393574 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 9.33 0.471 2 1 77.101 77.101 2;3 0.0005892 23628 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.962 45.428 147.77 127.39 70.949 105.7 82.917 0 140 129 74 102 83 0 3 2 1 2 1 0 47818 9316 1995 8977 21753;21754;21755 25088;25089;25090 25090 3 IEGSGDQIDTYELSGGAR Unmodified 1866.8595 0.85954994 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 5.75 4.32 1 1 1 1 59.532 59.532 2;3 1.014E-14 20715 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.84 102.24 29.755 9 68.19 198.61 33.188 177.07 28 9 65 186 38 167 2 1 2 4 2 4 105800 9317 118;1534 8978 21756;21757;21758;21759 25091;25092;25093;25094;25095 25095 5 IEGTPLETVQK Unmodified 1213.6554 0.65541781 2950 Q9CQZ6 Ndufb3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes yes 0 0 0 0 5.67 0.471 1 2 60.46 60.46 2;3 1.6809E-08 20308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.09 83.234 403.98 291.9 385.32 141.21 220.17 330.31 380 306 380 139 223 315 6 6 6 3 4 4 27204 9318 2950 8979 21760;21761;21762 25096;25097;25098;25099;25100;25101 25099 6 IEGTPLETVQKK Unmodified 1341.7504 0.75038083 2950 Q9CQZ6 Ndufb3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes yes 0 0 0 1 7.5 0.5 1 1 55.782 55.782 3 0.014841 17272 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.914 41.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9319 2950 8980 21763;21764 25102;25103 25102 2 IEGYDDQVLITEHGDLGNSR Unmodified 2230.0502 0.050204255 1563 P47753;Q5RKN9 Capza1 F-actin-capping protein subunit alpha-1 yes no 0 0 0 0 4 0 1 61.589 61.589 3 1.168E-05 21708 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.708 45.603 0 20.216 0 0 18.867 29.31 0 19 0 0 19 28 0 1 0 0 1 1 2590.5 9320 1563 8981 21765 25104 25104 1 IEGYEDQVLITEHGDLGNGK Deamidation (N) 2187.0332 0.033157207 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 1 0 0 3.5 0.5 1 1 67.748 67.748 4 1.5046E-06 24357 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.2 41.547 95.696 37.236 115.28 47.159 127.22 70.169 90 41 111 46 126 68 3 2 3 1 3 2 17125 9321 1564 8982 21766;21767 25105;25106;25107 25106 596 3 IEGYEDQVLITEHGDLGNGK Unmodified 2186.0491 0.049141622 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 0 4 0 1 67.191 67.191 3 0.00044618 24220 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.112 32.69 0 0 0 9.837 0 20.254 0 0 0 9 0 19 0 0 0 1 0 1 3163 9322 1564 8982 21768 25108 25108 1 IEHSFWR Unmodified 973.477 0.47699993 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 8 0 1 49.161 49.161 3 0.061615 13537 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.335 22.595 39.295 36.089 37.671 0 28.291 29.041 37 37 37 0 28 28 1 1 1 0 1 1 3137.8 9323 1955 8983 21769 25109 25109 1 IEHTETDAVSSR Unmodified 1343.6317 0.63172225 1939 Q3TWI9 Tmem63b CSC1-like protein 2 yes yes 0 0 0 0 3 0 1 33.177 33.177 3 0.034151 8887 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 39.581 19.794 0 38.738 37.71 0 38.702 0 0 37 37 0 37 0 0 1 1 0 1 0 2445.1 9324 1939 8984 21770 25110 25110 1 IEIESFFEGEDFSETLTR Unmodified 2147.9899 0.98989541 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 6 0 1 93.36 93.36 3 0.0011479 35324 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.621 35.987 9.5993 0 9.6896 0 0 0 9 0 9 0 0 0 1 0 1 0 0 0 1183.3 9325 1419 8985 21771 25111 25111 1 IEINFPAEYPFKPPK Unmodified 1788.9451 0.94505789 412 A0A338P786;P68037;A0A338P7E5;A0A338P702 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 1 9.5 1.71 2 2 1 1 77.586 77.586 3;4 2.3854E-07 26309 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.55 82.899 335.91 335.8 404.47 445.31 475.17 435.53 315 333 399 436 482 418 4 5 5 6 5 6 55282 9326 412 8986 21772;21773;21774;21775;21776;21777 25112;25113;25114;25115;25116;25117;25118 25115 7 IEIPLFHVLNAR Unmodified 1420.8191 0.81906951 1016 F7B209;Q80UP5;Q6PD24 Ankrd13a;Ankrd13d Ankyrin repeat domain-containing protein 13A;Ankyrin repeat domain-containing protein 13D yes no 0 0 0 0 10.5 0.5 1 1 79.875 79.875 3 0.00047289 24487 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.486 42.531 0 0 48.742 47.407 56.302 67.683 0 0 47 47 56 65 0 0 2 2 1 2 8905.7 9327 1016 8987 21778;21779 25119;25120 25120 2 IEIQNIFK Unmodified 1003.5702 0.57023162 2552 Q8CI32 Bag5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 0 9 0 1 75.763 75.763 2 0.012022 25333 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.069 32.254 88.277 81.316 62.445 57.486 0 78.884 83 83 65 56 0 74 1 1 1 1 0 1 4407.1 9328 2552 8988 21780 25121 25121 1 IEISELNR Unmodified 972.52401 0.52400971 657;662 CON__P04264;CON__P35908v2;CON__P35908 no no 0 0 0 0 8 3.56 1 1 1 55.88 55.88 2 0.0021401 18950 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.56 48.445 450.77 353.52 583.97 281.43 277.04 572 425 370 573 278 296 544 3 3 3 2 3 3 74749 + 9329 657;662 8989 21781;21782;21783 25122;25123;25124 25122 3 IEIVVVGTGNK Unmodified 1127.655 0.65502388 3233 Q9JKL4 Ndufaf3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 0 0 0 0 9 0 1 67.297 67.297 2 0.0097964 21358 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.426 17.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9330 3233 8990 21784 25125 25125 1 IEKELETVCNDVLALLDK Unmodified 2101.0977 0.097671719 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 1 13 0 1 108.68 108.68 4 0.059566 44124 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.514 8.8616 0 19.566 38.86 0 0 20.254 0 19 37 0 0 19 0 1 1 0 0 1 1376.8 9331 1797 8991 21785 25126 25126 1 IELLEDALVLR Unmodified 1282.7497 0.74965254 2670 Q8R570;B2FDF6 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 7 0 2 93.213 93.213 2;3 7.9884E-06 34524 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.88 78.792 29.749 37.058 27.185 0 0 39.442 28 37 28 0 0 37 1 1 2 0 0 1 3310.2 9332 2670 8992 21786;21787 25127;25128 25128 2 IELLGSYDPQK Unmodified 1261.6554 0.65541781 2036;3055 Q561M1;Q9D358 Acp1 Low molecular weight phosphotyrosine protein phosphatase no no 0 0 0 0 8.2 2.48 1 2 1 1 70.844 70.844 2;3 1.4021E-08 24376 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.78 74.333 168.61 124.96 192.64 257.57 194.49 195.97 158 121 194 249 194 185 4 2 3 4 3 3 39612 9333 2036;3055 8993 21788;21789;21790;21791;21792 25129;25130;25131;25132;25133 25130 5 IELPQFSIVDYK Unmodified 1450.7708 0.77078192 1774 P63137;A0A0G2JGS8;P50571 Gabrb2;Gabrb1 Gamma-aminobutyric acid receptor subunit beta-2;Gamma-aminobutyric acid receptor subunit beta-1 yes no 0 0 0 0 7.5 0.5 1 1 85.803 85.803 3 2.2533E-05 30729 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.925 66.808 0 59.584 0 30.071 67.061 9.594 0 56 0 28 65 9 0 2 0 2 2 1 4583.8 9334 1774 8994 21793;21794 25134;25135;25136 25136 3 IELVVVGPEAPLAAGIVGDLTSAGVR Unmodified 2502.4057 0.40573906 2183 Q64737;A0A338P6X4;D6RCG1 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes no 0 0 0 0 13 0 1 103.19 103.19 3 0.028706 41918 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 24.629 16.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9335 2183 8995 21795 25137 25137 1 IENDVATILSR Unmodified 1229.6616 0.66156582 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 5.5 0.5 1 1 72.622 72.622 3 0.00072097 26576 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.089 46.413 49.326 6.2499 0 20.252 27.359 49.321 46 9 0 19 28 47 1 1 0 1 1 2 4923.5 9336 2674 8996 21796;21797 25138;25139 25138 2 IENEEVR Unmodified 887.43486 0.43486035 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 1.5 0.5 1 1 36.384 36.384 2 0.027622 9543 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.009 39.723 148.6 108.08 0 0 0 119.39 139 111 0 0 0 112 2 2 0 0 0 2 37847 9337 965 8997 21798;21799 25140;25141 25140 2 IENHEGVR Unmodified 952.47264 0.47264284 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 26.785 26.785 2;3 0.00019577 5860 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 146.79 63.409 1116.4 886.15 974.36 809.77 794.38 1154.7 1050 917 981 801 810 1104 7 6 4 5 3 6 345230 9338 1609 8998 21800;21801;21802;21803;21804 25142;25143;25144;25145;25146;25147;25148 25143 7 IENHEGVR Deamidation (N) 953.45666 0.45665842 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 1 0 0 3 0.816 1 1 1 29.864 29.864 3 0.0087314 7074 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.67 12.422 109.09 27.124 37.646 48.034 37.714 77.808 102 28 37 46 37 74 3 1 1 1 1 2 36045 9339 1609 8998 21805;21806;21807 25149;25150;25151 25150 620 3 IENISNLHQLQMLELGSNR Unmodified 2208.1321 0.13210017 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 8 0 1 72.302 72.302 3 3.8283E-07 24385 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.405 51.564 0 0 30.296 0 38.702 0 0 0 28 0 37 0 0 0 1 0 1 0 4361.3 9340 1995 8999 21808 25152 25152 1 IENPNQFVPLYTDPQEVLDMR Unmodified 2517.221 0.22097475 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 5 0 1 89.128 89.128 3 0.016247 34043 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.969 21.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9341 3275 9000 21809 25153 25153 1 IENPNSLQDQSHALLK Unmodified 1805.9272 0.92717599 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 57.72 57.72 3 0.0089426 19069 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.422 14.393 0 29.315 28.537 0 56.948 47.411 0 28 28 0 56 46 0 1 1 0 1 1 4954.6 9342 3449;3451 9001 21810 25154 25154 1 IENVVLVVPAK Unmodified 1179.7227 0.72270951 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 8.5 0.5 1 1 73.826 73.826 2;3 0.00054387 25118 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.693 59.906 99.522 52.873 0 61.208 0 0 93 56 0 56 0 0 1 1 0 1 0 0 7889.6 9343 1967 9002 21811;21812 25155;25156 25155 2 IEPDSESQEEIIHNIAR Unmodified 1978.9596 0.95959833 1816 P70444 Bid BH3-interacting domain death agonist;BH3-interacting domain death agonist p15;BH3-interacting domain death agonist p13;BH3-interacting domain death agonist p11 yes yes 0 0 0 0 3 0.816 1 1 1 60.233 60.233 3 1.3125E-06 21383 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.13 83.377 30.044 19.729 29.112 30.604 0 40.508 28 19 28 28 0 38 1 1 1 1 0 2 7055.9 9344 1816 9003 21813;21814;21815 25157;25158;25159 25158 3 IEPGVDPDDTYNETPYEK Unmodified 2080.9113 0.91131074 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 3 0 1 63.447 63.447 4 0.021759 22796 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.308 16.089 30.044 0 0 0 49.162 0 28 0 0 0 47 0 1 0 0 0 1 0 1963.6 9345 2686 9004 21816 25160 25160 1 IEPNYPK Unmodified 859.44397 0.44396847 2393 Q8BH44;G3UW48;G3V005 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 6 0 1 49.023 49.023 2 0.043304 14892 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.324 27.426 168.17 94.702 148.72 109.72 145.52 123.77 158 102 148 111 148 120 1 1 1 1 1 1 6922 9346 2393 9005 21817 25161 25161 1 IEQFIHDVGLR Unmodified 1325.7092 0.70918471 1215 O35954;D3YXW5 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes no 0 0 0 0 8 0 1 74.23 74.23 3 0.0013608 25281 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.528 25.053 0 0 0 29.921 36.338 28.811 0 0 0 28 37 28 0 0 0 1 1 1 2973.4 9347 1215 9006 21818 25162 25162 1 IEQFVYSSPHDNK Unmodified 1562.7365 0.73652168 1460 Q8C483;P26638;A2AFS0 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 6.5 0.5 1 1 55.798 55.798 3 0.00039316 18129 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.044 39.962 69.09 84.068 38.84 69.876 62.132 116.55 65 84 37 65 65 111 2 2 1 1 1 2 7889 9348 1460 9007 21819;21820 25163;25164 25163 2 IEQIEAGTPGR Unmodified 1169.6041 0.60405094 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 4 0 1 49.537 49.537 2 5.1788E-05 16046 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.215 62.882 29.689 27.179 36.579 37.59 35.656 38.425 28 28 37 37 37 37 1 1 1 1 1 1 3841.5 9349 3253 9008 21821 25165 25165 1 IEQLSPFPFDLLLK Unmodified 1658.9283 0.92834519 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 9.75 0.829 2 1 1 104.55 104.55 2;3 9.2492E-08 33485 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.59 74.077 17.168 54.17 38.111 53.899 55.514 66.366 16 51 36 50 54 63 1 2 2 3 3 3 30123 9350 2074 9009 21822;21823;21824;21825 25166;25167;25168;25169;25170;25171;25172;25173 25169 8 IEREPEDNDYLWR Unmodified 1733.8009 0.80091285 935 E9Q8N8 Slc4a4 Anion exchange protein yes yes 0 0 0 1 6.67 4.5 1 1 1 55.976 55.976 3 7.5447E-05 19272 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.43 83.762 0 126.29 214.47 189.01 79.818 136.3 0 121 213 186 83 130 0 2 3 3 1 2 19242 9351 935 9010 21826;21827;21828 25174;25175;25176 25175 3 IESALTSLHQR Unmodified 1253.6728 0.67279921 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 8 0 1 52.14 52.14 3 8.0902E-05 14839 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.791 70.593 88.148 80.956 84.504 0 151.92 84.143 83 83 83 0 148 83 1 1 1 0 1 1 7899.3 9352 2160 9011 21829 25177 25177 1 IESILMSLPLTAR Unmodified 1442.8167 0.81668625 1528 P36552 Cpox Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial yes yes 0 0 0 0 11 0 1 93.646 93.646 3 0.03085 30189 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.016 17.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1432.2 9353 1528 9012 21830 25178 25178 1 IETDYWPCPPSLAVVETEWR Unmodified 2447.1467 0.14674718 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 5.5 0.5 1 1 92.029 92.029 3 3.0464E-07 34736 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.866 54.164 0 0 11.902 0 0 13.858 0 0 11 0 0 13 0 0 2 0 0 2 1015.1 9354 3344 9013 21831;21832 25179;25180;25181 25179 3 IETELRDICNDVLSLLEK Unmodified 2159.1144 0.11438442 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 1 10 3 1 1 108.37 108.37 4 0.00019473 37569 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.784 31.97 5.3001 5.9283 5.8818 5.1144 0 28 5 6 6 5 0 28 1 1 1 1 0 1 1688.8 9355 1773 9014 21833;21834 25182;25183 25182 2 IETIAASSTPTPIR Unmodified 1455.7933 0.79330827 1034 F8VQE9;Q8VHH5;A0A1D5RMG4;A0A0G2JDW1 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 7 0 1 59.598 59.598 3 0.0013709 19087 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.414 29.986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9356 1034 9015 21835 25184 25184 1 IETIEVMEDR Unmodified 1233.5911 0.59110299 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 6.67 4.5 1 1 1 64.057 64.057 2 8.2947E-38 22833 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 202.36 113.41 275.04 245.03 336.15 292.89 273.39 264.03 259 253 329 291 278 255 2 3 2 3 2 2 79465 9357 626;486 9016 21836;21837;21838 25185;25186;25187 25186 3 IETSPLSANLFK Deamidation (N) 1319.6973 0.69728262 3413 yes no 0 1 0 0 13 0 1 76.04 76.04 2 0.014625 28902 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.465 11.16 59.747 0 57.355 65.909 91.301 85.873 56 0 56 65 93 83 1 0 1 1 1 1 16593 + 9358 3413 9017 21839 25188 25188 1148 1 IETWHKPDLGTQENVHK Unmodified 2031.0174 0.017387984 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 1 6 0 1 52.638 52.638 5 0.045815 16631 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.876 10.937 168.26 114.38 117.16 111.64 143.71 173.92 158 120 120 111 148 167 1 1 1 1 1 1 3894.2 9359 1148 9018 21840 25189 25189 1 IEVASSVK Unmodified 831.47018 0.47018322 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 7 0 1 51.343 51.343 2 0.010851 15173 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.815 23.938 108.47 99.884 79.53 83.868 112.25 0 102 102 83 83 111 0 1 1 1 1 1 0 4987 9360 1242 9019 21841 25190 25190 1 IEVEQALAHPYLEQYYDPSDEPIAEAPFK Unmodified 3361.6031 0.60305447 1769 P63085;A0A338P781 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 7.67 3.86 1 1 1 85.521 85.521 4 2.7825E-18 33421 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.085 55.686 0 29.792 0 46 28.291 57.041 0 28 0 46 28 56 0 1 0 1 1 2 6887.1 9361 1769 9020 21842;21843;21844 25191;25192;25193 25193 3 IEVGLVVGNSQVAFEK Unmodified 1687.9145 0.91448604 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 10.2 2.77 1 1 2 78.588 78.588 2;3 2.7187E-08 28065 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.29 98.904 166.99 117.55 226.96 156.44 145.05 126.74 157 121 223 158 148 121 3 4 4 4 3 2 29112 9362 1554 9021 21845;21846;21847;21848 25194;25195;25196;25197;25198 25194 5 IEVLYTPTAMIRPEPAHPR Unmodified 2190.1619 0.16194373 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 1 8 0 1 62.603 62.603 4 0.057652 19731 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.233 7.671 49.358 0 0 89.725 52.822 47.529 46 0 0 83 56 46 1 0 0 1 1 1 4297.4 9363 1152 9022 21849 25199 25199 1 IEVPLHSLMAQTQLK Unmodified 1706.9389 0.93892665 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 9.33 0.471 2 1 72.691 72.691 3;4 2.2381E-05 23817 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.316 43.403 99.604 95.333 57.074 151.15 98.42 175.21 93 93 56 139 102 167 2 2 1 2 2 3 23182 9364 2137 9023 21850;21851;21852 25200;25201;25202 25200 3 IEVVNFLVPNAVYDIVK Unmodified 1931.0768 0.076800343 2367 Q8BFZ9;A0A1B0GSD8;A0A1B0GT43;A0A1B0GRQ1;A0A1B0GQZ0 Erlin2 Erlin-2 yes no 0 0 0 0 10 0.816 1 1 1 101.11 101.11 3 6.7195E-06 35970 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.457 65.591 11.708 18.218 8.6478 11.508 0 11.726 11 18 9 11 0 11 1 2 1 1 0 1 9336.1 9365 2367 9024 21853;21854;21855 25203;25204;25205 25203 3 IEWLESHQDADIEDFK Unmodified 1973.9007 0.90068647 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 5 0 2 75.354 75.354 3;4 0.00020519 27967 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.675 46.758 39.701 39.064 18.214 0 37.384 58.629 37 37 19 0 37 56 1 1 1 0 1 2 16269 9366 1419 9025 21856;21857 25206;25207 25207 2 IEYNVEHAVDYVER Unmodified 1734.8213 0.82131394 1197 O35526 Stx1a Syntaxin-1A yes yes 0 0 0 0 4 0.816 1 1 1 63.896 63.896 3 1.4844E-17 22467 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.69 101.99 58.044 47.309 97.788 29.756 45.109 47.749 56 46 93 28 46 46 2 1 1 1 1 1 32267 9367 1197 9026 21858;21859;21860 25208;25209;25210;25211 25211 4 IEYNVEHSVDYVER Unmodified 1750.8162 0.81622856 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 0 0 0 5.6 3.77 2 1 1 1 56.86 56.86 2;3 1.4135E-21 19347 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.88 105.58 148.37 19.566 226.92 243.13 250.65 211.39 139 19 218 236 251 204 3 1 4 4 3 4 131220 9368 1696 9027 21861;21862;21863;21864;21865 25212;25213;25214;25215;25216;25217 25217 6 IFANTPDSGCVLGMR Unmodified 1636.7701 0.77014677 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 8.5 0.5 1 1 70.482 70.482 3 1.8907E-05 23582 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.02 54.163 108.79 51.133 66.714 0 0 59.696 102 56 65 0 0 56 1 1 1 0 0 1 7874.6 9369 1568 9028 21866;21867 25218;25219 25218 2 IFCLVHK Unmodified 915.50004 0.50004356 2203 Q6NTA4;Q80X95 Rragb;Rraga Ras-related GTP-binding protein B;Ras-related GTP-binding protein A yes no 0 0 0 0 1 0 1 62.635 62.635 3 0.032815 20805 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.51 32.311 0 0 0 49.396 46.893 0 0 0 0 46 47 0 0 0 0 1 1 0 3949.2 9370 2203 9029 21868 25220 25220 1 IFDAVGFTFPNR Unmodified 1382.6983 0.69828568 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10.8 1.34 1 2 1 1 1 83.733 83.733 2;3 4.4895E-35 26573 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 188.91 137.19 78.735 127.76 181.78 146.9 133.26 211.03 75 122 178 145 131 201 3 3 3 3 3 3 266990 9371 3355 9030 21869;21870;21871;21872;21873;21874 25221;25222;25223;25224;25225;25226;25227;25228 25222 8 IFDDAYK Unmodified 870.41233 0.41233399 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8.5 2.69 1 1 1 1 61.392 61.392 2 0.020993 20937 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.95 18.331 1092.8 1057.4 826.57 484.12 1134.1 1263.9 1028 1076 815 469 1147 1216 6 6 4 3 6 6 167430 9372 1554 9031 21875;21876;21877;21878 25229;25230;25231;25232;25233;25234 25229 6 IFDFQGLQHQVAQVATQLEATR Unmodified 2499.287 0.2870209 3127 Q9DBL1;E9Q5L3 Acadsb Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 93.729 93.729 3 1.5527E-09 30623 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.589 43.775 0 7.2563 11.467 9 13.062 15.617 0 7 11 9 13 15 0 1 1 1 1 1 7450.5 9373 3127 9032 21879;21880 25235;25236 25236 2 IFDIDEAEEAIK Unmodified 1391.682 0.68202649 2855 Q99L45;E0CXJ3 Eif2s2 Eukaryotic translation initiation factor 2 subunit 2 yes no 0 0 0 0 4 0 1 81.224 81.224 3 0.010545 30543 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.288 24.052 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 781.48 9374 2855 9033 21881 25237 25237 1 IFEAYWFLGQAGSSIPSTWPR Unmodified 2412.1903 0.19026697 1193 O35405 Pld3 Phospholipase D3 yes yes 0 0 0 0 11.5 0.5 1 1 101.4 101.4 3 7.2271E-06 28678 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.29 40.564 0 0 0 5.465 2.9212 15.907 0 0 0 5 3 15 0 0 0 1 1 2 3901.5 9375 1193 9034 21882;21883 25238;25239 25239 2 IFELTELR Unmodified 1019.5651 0.56514624 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 7.5 0.5 1 1 75.45 75.45 2 0.0085557 26569 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.352 42.189 0 0 78.521 34.72 55.351 47.457 0 0 74 37 56 46 0 0 1 1 1 1 9500.8 9376 3402 9035 21884;21885 25240;25241 25240 2 IFFVSAK Unmodified 810.46398 0.46397563 2314;2357 Q80U63;Q811U4 Mfn2;Mfn1 Mitofusin-2;Mitofusin-1 no no 0 0 0 0 6.5 5.5 1 1 71.281 71.281 2 0.005509 24157 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.87 81.34 185.98 295.75 417.77 331.01 421.61 186.06 175 294 417 330 422 179 2 2 3 2 2 2 38668 9377 2314;2357 9036 21886;21887 25242;25243;25244 25242 3 IFGEDFIEQFK Unmodified 1371.6711 0.67106787 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 8.6 2.24 2 2 1 89.441 89.441 2;3 3.4124E-13 32339 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.1 104.11 166.92 140.45 99.11 155.79 155.75 106.18 158 143 102 153 158 102 4 3 2 4 3 2 63710 9378 2585 9037 21888;21889;21890;21891;21892 25245;25246;25247;25248;25249 25247 5 IFGGVQQLR Unmodified 1016.5767 0.57671398 916 E9Q683;Q6PHS9 Cacna2d2 Voltage-dependent calcium channel subunit alpha-2/delta-2;Voltage-dependent calcium channel subunit alpha-2-2;Voltage-dependent calcium channel subunit delta-2 yes no 0 0 0 0 10 0 1 60.701 60.701 2 0.0037037 16354 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.369 38.403 69.349 0 66.554 76.915 0 0 65 0 65 74 0 0 1 0 1 1 0 0 6474.8 9379 916 9038 21893 25250 25250 1 IFGLMVDR Unmodified 949.50552 0.50552287 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 10 0 1 74.212 74.212 2 0.041652 22433 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.032 31.927 48.865 44.901 44.765 46.396 64.567 37.6 46 46 46 46 65 37 1 1 1 1 1 1 3847.8 9380 3449;3451 9039 21894 25251 25251 1 IFGVTTLDIVR Unmodified 1232.7129 0.71287311 1327 P08249;A0A0G2JF23;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 9.89 3.45 1 2 1 2 1 2 81.189 81.189 2;3 8.9468E-82 25683 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 234.2 173.61 1547.8 813.62 1674.7 2110.9 1753.1 1998.1 1456 813 1632 2093 1782 1922 6 8 8 9 7 11 2083000 9381 1327 9040 21895;21896;21897;21898;21899;21900;21901;21902;21903 25252;25253;25254;25255;25256;25257;25258;25259;25260;25261;25262;25263;25264;25265;25266 25257 15 IFHELTQTDK Unmodified 1230.6245 0.62445203 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 13 0 1 54.632 54.632 3 0.0025411 18563 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.82 45.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9382 2804 9041 21904 25267 25267 1 IFHIDTNALHVPR Unmodified 1531.8259 0.82594581 2874 Q99MR0;F8WI57 Actl6b Actin-like protein 6B yes no 0 0 0 0 9 0 1 61.644 61.644 4 0.0054106 18602 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.081 28.21 20.134 28.121 18.769 0 19.874 0 19 28 19 0 19 0 1 1 1 0 1 0 3201.5 9383 2874 9042 21905 25268 25268 1 IFIAQPAWVLR Unmodified 1312.7656 0.76557738 792 D4AFX7;G3X922;A0A087WS25 Dnajc13 yes no 0 0 0 0 1 0 1 84.121 84.121 2 0.029614 29607 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.193 17.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9384 792 9043 21906 25269 25269 1 IFIGTFK Unmodified 824.47963 0.47962569 1463 P63163;P27048;A0A0G2JGN4 Snrpn;Snrpb Small nuclear ribonucleoprotein-associated protein N;Small nuclear ribonucleoprotein-associated protein B yes no 0 0 0 0 8.67 5.44 1 1 1 73.306 73.306 2 0.011634 25254 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.56 64.162 475.94 289.58 408.67 329.59 566.21 578.67 447 298 393 315 567 558 3 3 2 3 3 4 86247 9385 1463 9044 21907;21908;21909 25270;25271;25272;25273;25274 25271 5 IFILGPSHHVPLSR Unmodified 1571.8936 0.89363144 2740 Q91VH6 Memo1 Protein MEMO1 yes yes 0 0 0 0 1 0 1 58.55 58.55 4 0.015384 19011 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.092 29.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2385 9386 2740 9045 21910 25275 25275 1 IFINLPR Unmodified 871.52797 0.52797287 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 6.5 5.5 1 1 69.766 69.766 2 0.0093986 17674 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.32 58.993 79.182 181.92 0 178.3 308.92 238.5 74 176 0 167 311 232 1 2 0 1 2 2 95271 9387 2525 9046 21911;21912 25276;25277 25277 2 IFKSQGTALEK Unmodified 1220.6765 0.6764876 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 0 0 1 10 0 1 54.607 54.607 3 0.0020329 13574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.29 46.352 99.426 72.032 0 78.657 118.29 105.36 93 74 0 74 120 102 1 1 0 1 1 1 6837.7 9388 1373 9047 21913 25278 25278 1 IFLESHVR Unmodified 999.55016 0.55016488 3064 Q9D4H8;E0CYT5;H7BX52 Cul2 Cullin-2 yes no 0 0 0 0 9 0 1 48.507 48.507 3 0.0013592 12402 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.181 50.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9389 3064 9048 21914 25279 25279 1 IFLLTNNNLLLADQK Unmodified 1728.9774 0.97742065 911 E9QNH6;E9Q580;Q7TQD7;P46735 Myo1b Unconventional myosin-Ib yes no 0 0 0 0 1 0 1 89.826 89.826 3 4.3727E-08 32063 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.692 64.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9390 911 9049 21915 25280 25280 1 IFLQDIK Unmodified 875.51165 0.5116541 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 0 11.3 1.25 1 1 1 71.461 71.461 2 0.0083965 20812 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.67 31.78 843.41 615.07 736.38 330.85 1100.4 923.74 793 614 720 330 1093 896 5 4 3 2 3 4 145820 9391 1335 9050 21916;21917;21918 25281;25282;25283;25284;25285 25284 5 IFLSGITEEER Unmodified 1292.6612 0.66123147 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 8 0 1 70.131 70.131 2 0.0086148 23411 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.518 27.678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9392 2343 9051 21919 25286 25286 1 IFNFYPR Unmodified 955.49159 0.49158736 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 6.5 5.5 1 1 70.834 70.834 2 0.0020089 17990 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 153.67 71.409 62.887 174.25 467.02 350.14 301.44 315.46 59 170 456 351 309 304 1 1 2 2 1 2 103260 9393 207 9052 21920;21921 25287;25288 25288 2 IFNIQLEDEGLYECEAENIR Unmodified 2454.1373 0.1373047 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 6.67 2.98 1 2 1 1 1 84.159 84.159 3;4 1.037E-10 31269 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.563 69.001 39.274 87.242 133.43 66.588 143.71 47.083 37 84 131 66 140 46 3 3 6 4 6 3 29222 9394 1362 9053 21922;21923;21924;21925;21926;21927 25289;25290;25291;25292;25293;25294;25295;25296;25297 25295 9 IFNLYPR Unmodified 921.50724 0.50723743 2212;1850;836 Q3TT92;E9PWE8;Q62188;D3YUS0;P97427;Q6P1J1 Dpysl3;Crmp1 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 0 0 0 9.25 4.82 1 1 1 1 68.096 68.096 2 0.00037627 23283 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 160.17 87.816 1140.9 1476.9 1984.7 1542.3 1633.1 1376 1072 1479 1985 1535 1644 1315 4 5 6 5 4 4 1003500 9395 836;1850;2212 9054 21928;21929;21930;21931 25298;25299;25300;25301;25302;25303 25298 6 IFNTNNLWISLGAVK Unmodified 1688.925 0.92499115 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 4.67 5.19 2 1 94.15 94.15 2;3 1.9055E-06 32768 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.52 67.306 12.876 0 12 9.4714 19.439 0 12 0 12 9 19 0 1 0 1 1 1 0 3254.9 9396 2783 9055 21932;21933;21934 25304;25305;25306 25304 3 IFNTWLGDPSK Unmodified 1276.6452 0.64518747 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 11.2 1.09 1 2 1 79.294 79.294 2;3 3.3718E-06 24203 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.49 47.142 108.59 159.65 116.97 129.33 144.09 127.65 102 158 111 121 139 121 2 4 2 3 2 3 158080 9397 1702 9056 21935;21936;21937;21938 25307;25308;25309;25310;25311;25312;25313 25309 7 IFPSVIK Unmodified 802.49528 0.49527576 1257 O70481 Ubr1 E3 ubiquitin-protein ligase UBR1 yes yes 0 0 0 0 11 0 1 69.805 69.805 2 0.040319 20051 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.116 29.077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3387.8 9398 1257 9057 21939 25314 25314 1 IFQANNDATEVVLNK Unmodified 1674.8577 0.85769944 1191 O35375 Nrp2 Neuropilin-2 yes yes 0 0 0 0 7 0 1 70.966 70.966 3 0.00019039 24566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.044 43.324 34.08 12.051 32.731 22.406 41.589 38.255 32 14 32 23 42 37 1 1 1 1 1 1 4520.6 9399 1191 9058 21940 25315 25315 1 IFQIHTSR Unmodified 1000.5454 0.54541385 1712 P62192 Psmc1 26S protease regulatory subunit 4 yes yes 0 0 0 0 10 0 1 46.538 46.538 3 0.00022826 10315 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.48 94.832 39.489 42.025 0 59.933 67.803 47.101 37 42 0 56 69 46 1 1 0 1 1 1 8066.4 9400 1712 9059 21941 25316 25316 1 IFQILYANEGESK Unmodified 1510.7668 0.76675917 347 F8VPK5;A0A1Y7VMN0;P70336;A0A1Y7VLD1 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 9 0 1 81.462 81.462 3 0.00067034 27892 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.043 40.661 59.862 44.908 0 48.717 82.977 46.668 56 46 0 46 83 46 1 1 0 1 1 1 24328 9401 347 9060 21942 25317 25317 1 IFQNAPTDPTQDFSTQVAK Unmodified 2107.0222 0.02219859 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 8 2.61 2 1 1 1 72.068 72.068 3;4 1.603E-08 24293 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.511 65.919 177.87 149.8 145.33 109.91 178.55 107.4 167 149 139 102 175 102 4 4 3 2 3 2 38554 9402 1641 9061 21943;21944;21945;21946;21947 25318;25319;25320;25321;25322 25321 5 IFQTLLEVSASQDK Unmodified 1577.8301 0.83008771 1982 Q3UHG7 Lchn Protein LCHN yes yes 0 0 0 0 10 0 1 89.665 89.665 3 0.0065286 29055 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.318 16.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 991.2 9403 1982 9062 21948 25323 25323 1 IFSEATPR Unmodified 919.47633 0.47633123 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 10 3 1 1 50.541 50.541 2 0.0016174 14980 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.08 76.58 376.26 66.024 185.95 127.86 307.74 309.95 352 74 178 130 310 299 2 1 1 1 2 2 53755 9404 2702 9063 21949;21950 25324;25325 25324 2 IFSGGEDLDQEEK Unmodified 1465.6573 0.6572683 2630 Q8R0A7;Q3TA40;Q8BQB5;D3YUS2 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 5 0 2 62.425 62.425 2;3 5.4021E-05 21830 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.059 55.332 59.288 82.382 115.58 8.2295 115.73 0 56 83 112 9 111 0 1 2 2 1 2 0 10338 9405 2630 9064 21951;21952 25326;25327 25326 2 IFSGGLSPGLR Unmodified 1102.6135 0.61349341 1134 I6L974;Q8BYH7 Tbc1d17 TBC1 domain family member 17 yes no 0 0 0 0 10 0 1 66.314 66.314 2 0.0073892 18771 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.48 30.91 99.474 62.452 0 131.16 0 99.138 93 65 0 120 0 93 1 1 0 1 0 1 7080.5 9406 1134 9065 21953 25328 25328 1 IFSSAEALVLSFR Unmodified 1438.782 0.78201531 1165 O08759;A0A0J9YUK0 Ube3a Ubiquitin-protein ligase E3A yes no 0 0 0 0 10 0 1 96.115 96.115 3 0.055708 31409 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 33.685 9.6986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1566.5 9407 1165 9066 21954 25329 25329 1 IFSSEHDIFR Unmodified 1249.6091 0.60913632 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 7 0.816 1 1 1 60.035 60.035 3 0.00031302 19267 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.827 44.459 119.86 18.848 37.749 76.214 157.83 114.66 112 19 37 74 158 111 3 1 1 2 3 2 14412 9408 162 9067 21955;21956;21957 25330;25331;25332 25331 3 IFTASNVSSVPLPAENVTITAGQR Unmodified 2471.302 0.30200227 83 A0A0H2UH17;A0A0G2JDV6;Q80X50 Ubap2l Ubiquitin-associated protein 2-like yes no 0 0 0 0 9 0 1 78.348 78.348 4 0.0041758 26442 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 34.474 18.352 39.25 45.677 37.096 0 0 0 37 46 37 0 0 0 1 1 1 0 0 0 4010.2 9409 83 9068 21958 25333 25333 1 IFTGSLLVEEK Unmodified 1234.6809 0.68090428 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 8 0 1 76.629 76.629 3 0.041177 26366 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.58 5.6195 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 2890 9410 204 9069 21959 25334 25334 1 IFTIESAR Unmodified 935.50763 0.50763136 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 0 1 60.15 60.15 2 0.0012216 18656 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.88 100.91 78.488 71.895 92.643 73.479 100.01 96.284 74 74 93 74 102 93 1 1 1 1 1 1 10546 9411 3204 9070 21960 25335 25335 1 IFTLGNAEFPVSWDNEVK Deamidation (N) 2065.9997 0.99967223 2752 Q91WC0 Setd3 Histone-lysine N-methyltransferase setd3 yes yes 0 1 0 0 8 0 1 91.263 91.263 3 0.011108 33135 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.515 22.814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9412 2752 9071 21961 25336 25336 987 1 IFTNLHR Unmodified 899.49774 0.49773538 1615 Q8JZZ5;P53811 Pitpnb Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 0 11 0 1 45.839 45.839 3 0.0073136 9950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.462 55.54 20.149 0 39.932 0 0 0 19 0 37 0 0 0 1 0 1 0 0 0 5298.4 9413 1615 9072 21962 25337 25337 1 IFTNLYGR Unmodified 982.52362 0.52361577 680 D3YUM1;Q91YT0;D6RG60 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 9.25 4.82 1 1 1 1 64.232 64.232 2 1.5164E-17 21861 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.04 111.68 226.26 206.76 612.41 594.72 144.53 362.72 213 204 603 580 148 351 2 2 4 4 1 3 187370 9414 680 9073 21963;21964;21965;21966 25338;25339;25340;25341;25342;25343 25338 6 IFTPLLHK Unmodified 967.58549 0.58548775 1869 Q00612;G3UWD6;P97324 G6pdx;G6pd2 Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase;Glucose-6-phosphate 1-dehydrogenase 2 yes no 0 0 0 0 6.5 5.5 1 1 65.978 65.978 3 0.002124 22265 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 95.909 72.353 217.2 43.909 247.76 208.21 0 78.884 204 46 241 204 0 74 3 1 3 3 0 1 63854 9415 1869 9074 21967;21968 25344;25345;25346 25344 3 IFTVITK Unmodified 820.50584 0.50584045 2087 Q60790 Rasa3 Ras GTPase-activating protein 3 yes yes 0 0 0 0 1 0 1 71.173 71.173 2 0.027344 24081 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.561 30.681 42.473 32.516 47.607 0 40.305 44.688 40 34 46 0 40 43 1 1 1 0 1 1 2935 9416 2087 9075 21969 25347 25347 1 IFVAHSK Unmodified 800.45447 0.45447358 2111 Q61140;A0A0R4J212;O35177 Bcar1;Nedd9 Breast cancer anti-estrogen resistance protein 1;Enhancer of filamentation 1 yes no 0 0 0 0 11 0 1 43.473 43.473 3 0.012558 9089 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.823 25.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3410 9417 2111 9076 21970 25348 25348 1 IFVFEPPPGVK Unmodified 1228.6856 0.68559572 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9.5 0.5 1 1 80.696 80.696 2;3 4.175E-08 27687 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.07 83.959 128.27 0 119.29 154.31 135.4 84.614 120 0 120 148 139 83 1 0 2 1 1 1 22074 9418 3204 9077 21971;21972 25349;25350 25349 2 IFVGGIKEDTEEYNLR Unmodified 1881.9472 0.94724273 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1 8.6 2.42 1 1 1 1 1 67.54 67.54 3 1.3057E-17 24312 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.48 16.842 503.26 361.66 230.44 362.37 160.11 186.66 472 371 224 334 158 176 5 4 2 4 2 2 114930 9419 626;486 9078 21973;21974;21975;21976;21977 25351;25352;25353;25354;25355 25355 5 IFVGGLNPEATEEK Unmodified 1502.7617 0.76167379 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 0 7.5 0.5 1 1 70.082 70.082 3 9.3994E-05 23341 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.208 41.003 98.923 51.207 247.14 225.73 116.37 243.99 93 56 241 222 120 232 1 1 2 2 1 2 22195 9420 1906 9079 21978;21979 25356;25357 25357 2 IFVGGLSPDTPEEK Unmodified 1487.7508 0.75077476 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6;F6SHF3 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 6.67 0.471 1 2 70.238 70.238 2;4 3.7782E-11 24032 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.62 97.68 49.979 56.812 27.878 20.411 74.821 78.355 47 57 28 19 75 75 2 2 1 1 2 1 8411.8 9421 2079 9080 21980;21981;21982 25358;25359;25360 25359 3 IFVGSNATGTELR Unmodified 1363.7096 0.70957864 223 A0A0R4J2C2;P46097 Syt2 Synaptotagmin-2 yes no 0 0 0 0 8.5 0.5 1 1 59.415 59.415 2 0.00048228 17567 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.593 39.507 98.353 26.473 38.548 27.798 63.37 97.33 92 28 37 28 65 93 2 1 1 1 2 2 9080.1 9422 223 9081 21983;21984 25361;25362 25362 2 IFVMATHGLLSSDAPR Unmodified 1713.8872 0.88722543 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 1 0 1 72.107 72.107 3 0.016063 24503 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 38.808 17.855 0 9.576 0 40.441 0 49.036 0 9 0 37 0 46 0 1 0 1 0 1 4934.1 9423 2671 9082 21985 25363 25363 1 IFVPDYDPTIEDSYLK Unmodified 1913.9299 0.92986133 759 D3Z2V6;O08989 Mras Ras-related protein M-Ras yes no 0 0 0 0 13 0 1 85.98 85.98 3 0.044906 33754 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 32.341 20.425 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9424 759 9083 21986 25364 25364 1 IFVWDWQR Unmodified 1148.5767 0.57671398 1402 P17563;Q63836;G3UYY2;A0A0R4J135 Selenbp1;Selenbp2 Selenium-binding protein 1;Selenium-binding protein 2 yes no 0 0 0 0 11 0 1 83.286 83.286 2 0.01359 26026 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.953 51.46 64.155 44.618 0 74.053 72.536 42.702 60 46 0 69 74 42 1 1 0 1 1 1 14222 9425 1402 9084 21987 25365 25365 1 IFYLQNK Unmodified 924.5069 0.50690308 2717 Q8VHL0 Slc14a1 Urea transporter 1 yes yes 0 0 0 0 11 0 1 65.861 65.861 2 0.027574 18200 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.048 47.292 149.15 0 0 90.719 0 88.478 139 0 0 83 0 83 1 0 0 1 0 1 12443 9426 2717 9085 21988 25366 25366 1 IFYNQAIMSSK Unmodified 1300.6486 0.64855829 1993 Q3ULD5 Mccc2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial yes yes 0 0 0 0 11 0 1 68.187 68.187 2 1.7671E-07 19237 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.79 81.346 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3752.8 9427 1993 9086 21989 25367 25367 1 IFYSFLTQEGNWK Unmodified 1631.7984 0.79839365 2771 Q91YJ2;A0A338P7D2 Snx4 Sorting nexin-4 yes no 0 0 0 0 12 0 1 90.867 90.867 3 1.6331E-05 25840 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.21 80.411 0 23.953 31.029 48.429 0 0 0 23 32 46 0 0 0 1 1 1 0 0 4770.3 9428 2771 9087 21990 25368 25368 1 IFYVTEK Unmodified 898.48002 0.48001963 2616 Q8K4R4;A0A0A0MQ88;X1WI19 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 0 9 0 1 65.521 65.521 2 0.05277 20535 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.324 34.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9429 2616 9088 21991 25369 25369 1 IGADFLGR Unmodified 847.4552 0.45520186 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 8 0.816 1 1 1 62.371 62.371 2 0.003958 20466 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.52 28.334 317.58 198.62 318.27 486.26 566.88 276.29 297 195 318 472 569 269 4 2 3 5 4 3 250650 9430 1311 9089 21992;21993;21994 25370;25371;25372;25373;25374 25371 5 IGAEVYHNLK Unmodified 1142.6084 0.60840804 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 8.82 2.69 2 3 2 1 3 53.141 53.141 2;3;4 5.6799E-08 16164 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142.92 53.975 1001.7 879.03 1176.3 796.81 1150.4 1077 943 905 1166 778 1153 1037 7 8 8 7 9 8 792770 9431 1398 9090 21995;21996;21997;21998;21999;22000;22001;22002;22003;22004;22005 25375;25376;25377;25378;25379;25380;25381;25382;25383;25384;25385 25378 11 IGAEVYHNLK Deamidation (N) 1143.5924 0.59242362 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 1 0 0 8.67 3.09 1 1 1 55.431 55.431 3 0.0071465 18634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.04 25.954 138.37 213.99 198.1 327.41 270.18 162.25 130 213 204 315 278 157 1 3 2 3 3 2 21720 9432 1398 9090 22006;22007;22008 25386;25387;25388 25386 485 3 IGAFGYMECSAK Unmodified 1332.5842 0.58424348 3254 Q9QUI0;A0A0A6YXF6 Rhoa Transforming protein RhoA yes no 0 0 0 0 9 0 1 67.181 67.181 2 0.0017393 21361 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.657 39.184 0 0 20.558 0 48.116 0 0 0 19 0 46 0 0 0 1 0 1 0 2642.5 9433 3254 9091 22009 25389 25389 1 IGAGDYQPTEQDILR Unmodified 1674.8213 0.82131394 1411 P18872;D3Z2M7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 62.695 62.695 2;3 2.1322E-41 22239 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.41 143.15 336.83 216.44 205.75 114.99 323.48 251.69 316 228 203 111 323 241 6 7 4 2 6 4 329400 9434 1411 9092 22010;22011;22012;22013;22014;22015 25390;25391;25392;25393;25394;25395;25396;25397 25397 8 IGAHGKPVIFLHPK Unmodified 1512.8929 0.89290316 231 A0A0U1RQ27;Q9D1I5 Mcee Methylmalonyl-CoA epimerase, mitochondrial yes no 0 0 0 1 12 0 1 52.477 52.477 5 0.00010027 11207 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.089 58.676 108.94 101.18 0 0 0 148.17 102 102 0 0 0 139 1 1 0 0 0 1 7438.7 9435 231 9093 22016 25398 25398 1 IGAHSHIR Unmodified 889.48823 0.48823332 3320 Q9WTM5;A0A1B0GSR4;A0A1B0GRW3;A0A1B0GT54 Ruvbl2 RuvB-like 2 yes no 0 0 0 0 7 0 1 26.299 26.299 3 0.032763 4122 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.787 11.812 0 0 30.296 0 33.472 0 0 0 28 0 32 0 0 0 1 0 1 0 532.48 9436 3320 9094 22017 25399 25399 1 IGATQLR Unmodified 757.44464 0.44463717 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 0 7.5 0.5 1 1 41.397 41.397 2 0.018664 9759 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.92 27.604 179.28 373.08 0 148.44 440.23 383.99 168 362 0 139 440 372 1 2 0 1 2 2 50218 9437 2125 9095 22018;22019 25400;25401 25401 2 IGCLLSGGLDSSLVAASLLK Unmodified 1973.0867 0.086713102 2104 Q61024 Asns Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 0 11 0 1 101.44 101.44 3 1.6845E-05 33460 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.427 34.321 0 0 0 48.767 0 20.254 0 0 0 47 0 19 0 0 0 2 0 1 5710.9 9438 2104 9096 22020 25402;25403 25402 2 IGCPLTPLPPVSIAIR Unmodified 1702.9804 0.98039754 274 A0A1D5RLG3;Q80UJ7 Rab3gap1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 0 11 0 1 81.951 81.951 3 0.0024631 25510 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.537 35.04 88.789 53.597 0 0 56.581 58.081 83 56 0 0 56 56 1 1 0 0 1 1 5559.9 9439 274 9097 22021 25404 25404 1 IGCTVSLLNFYK Unmodified 1413.7326 0.73262227 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 11.5 0.5 1 1 82.755 82.755 3 1.1398E-05 25913 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.882 62.349 69.745 0 0 50.278 0 59.696 65 0 0 46 0 56 1 0 0 1 0 1 5979.2 9440 343 9098 22022;22023 25405;25406 25405 2 IGDETAR Unmodified 760.37153 0.37153181 938 Q8BK08;E9Q933;Z4YN74 Tmem11 Transmembrane protein 11, mitochondrial yes no 0 0 0 0 4 0 1 32.061 32.061 2 0.036462 7774 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.119 17.832 63.82 44.765 56.219 30.648 51.938 0 60 47 56 32 51 0 1 1 1 1 1 0 7868.3 9441 938 9099 22024 25407 25407 1 IGDEYFTFITDCKDPK Unmodified 1947.8924 0.89242997 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 1 7 0 1 76.715 76.715 4 0.00044861 27034 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.037 46.158 88.283 52.19 86.23 0 104.08 75.914 83 56 83 0 102 74 1 1 1 0 1 1 3218.5 9442 1827 9100 22025 25408 25408 1 IGDFGLATVK Unmodified 1019.5651 0.56514624 997;1306 P04627;A0A0N4SWH5;B1AUP0;F6SZ47;P28028;Q99N57 Araf;Braf;Raf1 Serine/threonine-protein kinase A-Raf;Serine/threonine-protein kinase B-raf;RAF proto-oncogene serine/threonine-protein kinase no no 0 0 0 0 9 0 1 71.451 71.451 2 0.0018429 23300 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.496 48.428 59.555 0 89.506 0 0 0 56 0 83 0 0 0 1 0 1 0 0 0 6180.2 9443 1306;997 9101 22026 25409 25409 1 IGDLQAFVGR Unmodified 1074.5822 0.58219329 1348 P10852;A0A0U1RP98 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 8.5 0.5 1 1 71.909 71.909 2 5.7493E-05 24187 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.88 55.441 0 202.01 513.31 422.47 144.68 222.93 0 195 503 417 148 213 0 2 3 3 1 2 46714 9444 1348 9102 22027;22028 25410;25411;25412 25411 3 IGDQEFDHLPALLEFYK Unmodified 2034.0098 0.0098429899 1571 P47941;A0A338P6Q0;A0A338P675 Crkl Crk-like protein yes no 0 0 0 0 6 0 1 89.147 89.147 4 0.0039789 33607 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.277 22.699 9.535 0 20.51 0 0 9.594 9 0 19 0 0 9 1 0 1 0 0 1 956.76 9445 1571 9103 22029 25413 25413 1 IGDQEFDSLPALLEFYK Unmodified 1983.983 0.98295954 2166 Q64010;Q5ND50;F7D232 Crk Adapter molecule crk no no 0 0 0 0 8.5 2.69 1 1 1 1 99.409 99.409 3 2.2455E-06 36391 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.35 82.215 70.373 37.323 43.218 19.407 58.576 39.254 66 38 42 19 56 38 3 2 2 1 2 2 20815 9446 2166 9104 22030;22031;22032;22033 25414;25415;25416;25417 25415 4 IGEAEAAVIEAMGK Unmodified 1387.7017 0.70171607 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 9.5 3.5 1 1 84.53 84.53 3 0.0012982 32963 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.804 31.206 0 20.216 18.806 60.087 0 0 0 19 19 56 0 0 0 1 1 2 0 0 3804.7 9447 2059 9105 22034;22035 25418;25419 25419 2 IGEEIVITAHILK Unmodified 1434.8446 0.84461556 2939 Q9CQR4 Acot13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 0 7 0 1 76.64 76.64 3 0.0019288 27006 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.899 33.179 79.019 33.438 35.971 37.228 56.866 0 74 37 37 37 56 0 1 1 1 1 1 0 2406 9448 2939 9106 22036 25420 25420 1 IGEEQSPEDAEDGPPELLFIHGGHTAK Unmodified 2872.3515 0.35153123 2100 Q60972 Rbbp4 Histone-binding protein RBBP4 yes yes 0 0 0 0 4 0 1 65.665 65.665 5 0.0021629 23397 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.344 24.79 29.952 18.196 0 0 29.288 0 28 19 0 0 28 0 1 1 0 0 1 0 3028.7 9449 2100 9107 22037 25421 25421 1 IGEGFLTDLSQLK Unmodified 1419.7609 0.76094551 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 9.25 2.28 1 1 1 1 88.035 88.035 2;3 2.8166E-14 31868 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.93 62.994 79.182 122.34 18.845 188.67 136.75 66.711 74 120 19 176 139 65 1 2 1 3 2 1 29214 9450 2555 9108 22038;22039;22040;22041 25422;25423;25424;25425 25423 4 IGEGFLTDLSQLKK Unmodified 1547.8559 0.85590853 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 9.75 0.829 2 1 1 80.256 80.256 3;4 0.00039097 25151 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.989 47.665 386.02 336.93 119.38 472.14 209.92 315.89 362 343 120 446 213 300 3 3 1 4 2 2 67527 9451 2555 9109 22042;22043;22044;22045 25426;25427;25428;25429 25428 4 IGEHTPSALAIMENANVLAR Deamidation (N) 2107.0732 0.073188303 1309 P05064;A6ZI44;D3YWI1;D3Z510;A0A0U1RPN8 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 0 6 0 1 71.122 71.122 3 3.4886E-10 25282 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.547 72.157 49.176 36.052 0 39.57 46.298 0 46 37 0 37 46 0 1 1 0 1 1 0 10087 9452 1309 9110 22046 25430 25430 370 1 IGEHTPSALAIMENANVLAR Unmodified 2106.0892 0.089172718 1309 P05064;A6ZI44;D3YWI1;D3Z510;A0A0U1RPN8 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 8.22 2.1 2 2 2 1 1 1 72.984 72.984 3;4 1.0545E-61 24661 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.77 141.53 413.03 265.92 436.26 494.87 391.3 408.29 388 269 436 482 399 390 7 5 7 9 6 6 335480 9453 1309 9110 22047;22048;22049;22050;22051;22052;22053;22054;22055 25431;25432;25433;25434;25435;25436;25437;25438;25439;25440;25441 25436 11 IGEWELIQESGVPLKPLFGPGYTGIR Unmodified 2855.5222 0.5221658 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 9 0 1 92.232 92.232 4 1.9539E-16 32780 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.213 57.199 29.419 56.647 57.045 0 0 49.036 28 56 56 0 0 46 1 1 1 0 0 1 8103.7 9454 1641 9111 22056 25442 25442 1 IGEYLEK Unmodified 850.44363 0.44363412 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6 0 1 61.233 61.233 3 0.027944 20674 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.205 10.702 49.045 16.26 38.811 0 0 0 46 19 37 0 0 0 1 1 1 0 0 0 2262 9455 2264 9112 22057 25443 25443 1 IGFFQGDIR Unmodified 1051.5451 0.5450795 735 D3Z041;P41216 Acsl1 Long-chain-fatty-acid--CoA ligase 1 no no 0 0 0 0 9 0 1 68.466 68.466 2 0.055579 21864 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.776 29.326 0 98.952 0 89.567 61.226 77.137 0 93 0 83 65 74 0 1 0 1 1 1 5875.4 9456 735 9113 22058 25444 25444 1 IGFGPSPFSLTEGLPK Unmodified 1645.8716 0.87155859 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 10.2 1.17 2 1 1 1 86.697 86.697 3;4 7.7462E-06 30358 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.358 45.13 101.71 0 92.217 158.19 0 98.072 97 0 88 150 0 92 2 0 2 3 0 2 47133 9457 1415 9114 22059;22060;22061;22062;22063 25445;25446;25447;25448;25449 25446 5 IGFPETAEEELEEIASENSDSIYSSTPEVK Unmodified 3299.5093 0.50927325 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 0 4 0 1 95.733 95.733 4 2.7532E-06 34385 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.025 41.398 3.1877 0 5.2652 2.889 4.0513 0 3 0 5 3 4 0 1 0 1 1 1 0 930.54 9458 3388 9115 22064 25450 25450 1 IGFPSTSPAK Unmodified 1003.5338 0.53384611 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 10 0 1 57.217 57.217 2 0.0043008 14791 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.516 51.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2836.4 9459 3358 9116 22065 25451 25451 1 IGFPSTTPAK Unmodified 1017.5495 0.54949617 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 10 0 1 58.276 58.276 2 0.014047 15268 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.91 31.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9460 761 9117 22066 25452 25452 1 IGFPWSEIR Unmodified 1103.5764 0.57637963 1451;1452;1453 P26043;Q7TSG6;P26041;P26040 Rdx;Msn;Ezr Radixin;Moesin;Ezrin no no 0 0 0 0 9.5 0.5 1 1 76.911 76.911 2 0.00030694 25821 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.61 72.229 0 146.03 206.82 115.63 0 256.91 0 139 204 111 0 241 0 1 2 1 0 2 77803 9461 1453;1452;1451 9118 22067;22068 25453;25454 25453 2 IGFTGSTEVGK Unmodified 1094.5608 0.56078914 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 7 0 1 57.469 57.469 2 0.00023448 18051 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.883 56.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9462 2633 9119 22069 25455 25455 1 IGFVGFPSVGK Unmodified 1106.6124 0.61243078 1503 P32233 Drg1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 0 11 0 1 77.388 77.388 3 0.0096813 23369 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.108 21.364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9463 1503 9120 22070 25456 25456 1 IGGAGAR Unmodified 600.33436 0.33435844 3431 yes no 0 0 0 0 5 0 1 25.486 25.486 2 0.055016 4476 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.62 72.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 9464 3431 9121 22071 25457 25457 1 IGGAQNR Unmodified 714.37729 0.37728589 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 0 0 0 7.6 2.42 1 1 1 1 1 25.691 25.691 2 0.019623 4305 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.65 41.757 524.52 686.65 599.14 617.65 898.2 740.82 494 688 615 613 908 719 3 6 5 5 4 5 250050 9465 1510 9122 22072;22073;22074;22075;22076 25458;25459;25460;25461;25462;25463 25459 6 IGGEEGGRPQEADDPAAGSQAR Unmodified 2166.989 0.98900098 3222 Q9JJY3 Smpd3 Sphingomyelin phosphodiesterase 3 yes yes 0 0 0 1 2.5 0.5 1 1 37.098 37.098 3 2.2237E-09 10481 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.866 53.171 40.373 46.823 27.681 18.76 38.209 19.706 38 47 28 19 38 19 2 2 1 1 2 1 7245.5 9466 3222 9123 22077;22078 25464;25465 25464 2 IGGHGAEYGAEALER Unmodified 1528.727 0.72701962 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 5.88 2.93 1 2 2 1 1 1 46.029 46.029 2;3;4 4.624E-42 14431 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 181.72 60.247 483.36 595.48 445.86 436.74 1019.8 334.15 455 585 431 431 991 320 5 5 6 9 6 5 806750 9467 2735 9124 22079;22080;22081;22082;22083;22084;22085;22086 25466;25467;25468;25469;25470;25471;25472;25473;25474;25475;25476;25477 25469 12 IGGIFAFK Unmodified 851.49052 0.49052473 1501 P32020 Scp2 Non-specific lipid-transfer protein yes yes 0 0 0 0 8 4.97 1 1 1 77.904 77.904 2 0.0051681 20917 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.54 61.856 402.64 238.46 185.87 336.32 416.32 307.63 377 238 187 325 419 296 4 3 2 4 4 4 87636 9468 1501 9125 22087;22088;22089 25478;25479;25480;25481;25482 25481 5 IGGIGTVPVGR Unmodified 1024.6029 0.60292873 1729;1341 P10126;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 9.83 1.77 2 1 1 1 1 56.477 56.477 2;3 5.1072E-13 14446 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 148.14 106.25 979.9 640.22 967.64 935.59 884.15 1075.3 925 655 964 915 906 1037 5 3 4 4 3 5 363700 9469 1341;1729 9126 22090;22091;22092;22093;22094;22095 25483;25484;25485;25486;25487;25488;25489 25487 7 IGGVQQDTILAEGLHFR Unmodified 1852.9795 0.97954591 1179 O35129 Phb2 Prohibitin-2 yes yes 0 0 0 0 9 2.94 1 1 1 70.509 70.509 3 3.0582E-06 25151 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.933 70.99 0 184.43 169.54 121.75 204.19 135.42 0 176 167 120 205 130 0 3 2 2 3 2 35443 9470 1179 9127 22096;22097;22098 25490;25491;25492 25490 3 IGHAHSGMGK Unmodified 993.48143 0.48143338 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 9 2.1 1 2 1 1 30.559 30.559 3;4 0.00096453 5314 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.294 30.157 468.97 261.44 801.17 355.72 444.42 564.02 441 279 769 369 453 538 3 4 5 3 3 4 32980 9471 2173 9128 22099;22100;22101;22102;22103 25493;25494;25495;25496;25497;25498 25494 6 IGHAHSGMGK Oxidation (M) 1009.4763 0.47634801 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 1 0 9 0 1 27.071 27.071 4 0.032983 4108 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.891 27.105 20.195 38.006 0 0 44.978 0 19 37 0 0 43 0 1 1 0 0 1 0 1218.6 9472 2173 9128 22104 25499 25499 165 1 IGHDSELENQEK Unmodified 1397.6423 0.64228694 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 3 0 1 41.01 41.01 3 0.00019364 12531 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.522 54.477 59.613 0 79.767 0 57.278 37.808 56 0 74 0 56 37 1 0 1 0 1 1 5763.4 9473 743 9129 22105 25500 25500 1 IGIEIIK Unmodified 784.50584 0.50584045 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 69.014 69.014 2 0.021458 22138 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.39 8.4262 977.58 1111 1390 393.25 1486.2 1611 924 1128 1367 399 1491 1551 2 2 2 1 2 2 104940 9474 1766 9130 22106;22107 25501;25502 25502 2 IGIEIIKR Unmodified 940.60695 0.60695147 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 11 0 1 57.712 57.712 3 0.048504 14641 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.112 4.48 188.85 0 0 131.16 0 0 176 0 0 120 0 0 1 0 0 1 0 0 24500 9475 1766 9131 22108 25503 25503 1 IGIFGQDEDVTSK Unmodified 1407.6882 0.6881745 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 6.33 0.471 2 1 69.222 69.222 2;3 0.0023384 24489 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.448 27.801 0 29.792 0 49.593 36.424 0 0 28 0 46 37 0 0 1 0 1 1 0 5252.3 9476 1242 9132 22109;22110;22111 25504;25505;25506 25504 3 IGIHSGSVLAGVVGVR Unmodified 1519.8835 0.88346068 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 12 0 1 62.73 62.73 3 0.0068622 15219 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 41.284 23.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9477 1036 9133 22112 25507 25507 1 IGIIDDDIFEEDEHFFVR Unmodified 2208.0375 0.037514303 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 7.33 4.03 1 1 1 88.832 88.832 3 2.649E-13 33638 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.35 100.95 27.816 60.928 66.906 26.711 50.027 0 26 60 66 28 49 0 2 4 3 1 3 0 12272 9478 2619 9134 22113;22114;22115 25508;25509;25510;25511;25512 25509 5 IGILHENFQTLK Unmodified 1411.7823 0.78234966 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 11.5 1.5 1 1 64.308 64.308 3 4.3829E-05 18173 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.692 55.574 88.167 0 149.95 0 102.73 115.39 83 0 139 0 102 111 1 0 1 0 1 1 8107.9 9479 2646 9135 22116;22117 25513;25514 25513 2 IGIMPGHIHK Unmodified 1101.6117 0.61171928 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 10 0 1 47.808 47.808 3 0.0063135 10836 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.708 29.695 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9480 3337 9136 22118 25515 25515 1 IGITAITHQNK Unmodified 1194.6721 0.67207093 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 10 0 1 50.342 50.342 3 4.0323E-06 11807 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.91 79.055 63.497 78.405 81.886 64.995 62.173 82.44 60 79 83 65 65 79 1 1 1 1 1 1 11904 9481 1880 9137 22119 25516 25516 1 IGIVELAHVLPTEENFLLLFR Unmodified 2422.3624 0.36241768 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 9.75 0.829 2 1 1 104.51 104.51 3 4.621E-11 36836 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.371 84.313 25.038 14.82 14.178 0 7.322 0 24 14 14 0 7 0 2 1 2 0 1 0 5516.2 9482 1359 9138 22120;22121;22122;22123 25517;25518;25519;25520 25517 4 IGIVGGCQEYTGAPYFAGISALK Unmodified 2371.1882 0.18821806 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06;J3QPU6 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 10.7 1.7 1 1 1 86.929 86.929 3 7.4254E-07 28024 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.904 48.504 69.468 54.9 0 81.975 0 0 65 56 0 75 0 0 2 2 0 2 0 0 15249 9483 1142 9139 22124;22125;22126 25521;25522;25523 25522 3 IGIVGLPNVGK Unmodified 1065.6546 0.65462995 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 11.5 1.12 1 1 1 1 72.82 72.82 2;3 1.5419E-06 18792 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.247 60.849 217.23 349.98 83.169 440.38 90.467 495.24 204 344 83 409 93 467 2 3 1 3 1 3 39580 9484 2999 9140 22127;22128;22129;22130 25524;25525;25526;25527;25528 25527 5 IGKFPFAANSR Unmodified 1206.6509 0.65094155 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 1 12 0 1 57.783 57.783 3 0.0026813 13240 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.548 51.149 196.51 229.3 320.68 242.69 143.66 0 186 233 320 242 148 0 1 1 1 1 1 0 40641 9485 1164 9141 22131 25529 25529 1 IGKLEGWELFPTPK Unmodified 1613.8817 0.88172935 1095 G5E814;Q9D8B4 Ndufa11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 yes no 0 0 0 1 9 0 1 81.016 81.016 4 0.054724 27822 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.445 16.867 0 0 67.783 57.168 0 49.036 0 0 65 56 0 46 0 0 1 1 0 1 3691.7 9486 1095 9142 22132 25530 25530 1 IGKNDAIGK Unmodified 914.51853 0.5185304 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 1 9 0 1 44.974 44.974 3 0.036048 10813 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.191 27.677 173.85 122.37 253.14 253.79 0 0 164 130 252 246 0 0 1 1 1 1 0 0 21106 9487 1553 9143 22133 25531 25531 1 IGKPHTVPCK Unmodified 1135.6172 0.61719858 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 1 10.5 0.5 1 1 39.785 39.785 4 0.011964 7800 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.608 37.172 463.59 352.12 234.09 538.03 231.58 276.95 435 364 242 509 245 266 2 2 1 2 1 1 27315 9488 1449 9144 22134;22135 25532;25533 25532 2 IGLFGGAGVGK Unmodified 974.55492 0.5549159 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.08 4.73 3 1 2 4 2 69.379 69.379 2;3 8.8199E-13 17345 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 143.85 96.784 2644.4 4130.6 5215.2 3126.5 2461.8 4413.2 2487 4106 5184 3151 2487 4192 12 12 12 11 11 8 1834100 9489 1642 9145 22136;22137;22138;22139;22140;22141;22142;22143;22144;22145;22146;22147 25534;25535;25536;25537;25538;25539;25540;25541;25542;25543;25544;25545;25546;25547;25548;25549;25550;25551;25552 25544 19 IGLFYMDNDLITR Unmodified 1569.7861 0.78611441 2829 Q99JI4 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 0 9 0 1 85.817 85.817 2 0.0016553 29977 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.786 48.645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1494.7 9490 2829 9146 22148 25553 25553 1 IGLGTDVAGGYSYSMLDAIR Unmodified 2058.0092 0.0091910629 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 8 1 1 1 84.454 84.454 3 0.0025232 29299 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.962 30.348 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 5361.4 9491 3307 9147 22149;22150 25554;25555 25555 2 IGLIQFCLSAPK Unmodified 1345.7428 0.74279303 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 9.25 4.82 1 1 1 1 82.526 82.526 2;3 1.9766E-06 29082 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.4 77.703 39.406 79.657 58.107 61.208 46.807 87.142 37 75 55 56 46 83 1 2 2 1 1 2 21524 9492 1824 9148 22151;22152;22153;22154 25556;25557;25558;25559 25556 4 IGLIQGNR Unmodified 869.5083 0.50830006 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 10 0 1 50.529 50.529 2 0.0043159 11946 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.69 65.501 147.73 116.46 139.12 79.678 146.2 144 139 121 139 83 148 139 1 1 1 1 1 1 45414 9493 1568 9149 22155 25560 25560 1 IGLIQHLPK Unmodified 1017.6335 0.63350058 3280 Z4YLT8;Q9QYK7 Rnf11 RING finger protein 11 yes no 0 0 0 0 10.5 0.5 1 1 59.081 59.081 3 0.0059618 15884 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.107 46.471 0 0 67.783 57.168 0 88.478 0 0 65 56 0 83 0 0 1 1 0 1 5780.2 9494 3280 9150 22156;22157 25561;25562 25561 2 IGLNIGPVVAGVIGAR Unmodified 1504.9089 0.90894715 1839 P84309 Adcy5 Adenylate cyclase type 5 yes yes 0 0 0 0 12 0 1 86.874 86.874 2 0.0098651 24370 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.998 20.794 20.268 0 20.071 8.6408 0 0 19 0 19 9 0 0 1 0 1 1 0 0 829.78 9495 1839 9151 22158 25563 25563 1 IGLNLFNINPDK Unmodified 1356.7402 0.74015049 1918 Q3TES0;A0A0N4SWH8 Iqsec3 IQ motif and SEC7 domain-containing protein 3 yes no 0 0 0 0 10 0 1 83.651 83.651 3 0.012552 26587 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.915 23.037 14.952 13.888 0 0 28.62 19.437 14 14 0 0 28 19 1 1 0 0 1 1 3276.2 9496 1918 9152 22159 25564 25564 1 IGLNLFNK Unmodified 917.53345 0.53345218 281;553 A0A1D5RM83;E9PUA3;Q8R0S2;D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7 Iqsec1;Iqsec2 IQ motif and SEC7 domain-containing protein 1;IQ motif and SEC7 domain-containing protein 2 no no 0 0 0 0 11.5 0.5 1 1 74.809 74.809 2 0.0067556 19694 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.43 67.078 275.43 492.75 663.98 309.34 502.65 209.24 259 491 655 309 501 202 1 2 2 1 2 1 88831 9497 281;553 9153 22160;22161 25565;25566 25566 2 IGLVEALCGFQFTFK Unmodified 1728.8909 0.89091383 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 11.7 0.471 1 2 100.39 100.39 3;4 5.9851E-05 28642 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.823 75.458 37 15.767 11.527 29.917 5 22.386 37 15 12 28 5 21 1 2 1 2 1 2 9730.2 9498 3279 9154 22162;22163;22164 25567;25568;25569;25570;25571 25571 5 IGMAIPAMAIPPVIMNTLEK Unmodified 2109.14 0.140011 2730 Q91V61 Sfxn3 Sideroflexin-3 yes yes 0 0 0 0 11.5 0.5 1 1 103.53 103.53 4 2.5913E-08 29019 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.802 42.833 12.843 6.582 0 9.837 0 14 12 7 0 9 0 14 1 1 0 1 0 1 2590.5 9499 2730 9155 22165;22166 25572;25573;25574 25574 3 IGNFTIQNVFPQSDGDSSK Unmodified 2052.9752 0.9752484 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 9 0 1 79.546 79.546 3 4.8273E-07 27127 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.742 53.586 30.044 0 0 30.092 27.237 19.477 28 0 0 28 28 19 1 0 0 1 1 1 8266.4 9500 1581 9156 22167 25575 25575 1 IGNILDLCTALSALSGVPADK Unmodified 2127.1246 0.12455517 2673 Q8R5H1 Usp15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 0 10.5 0.5 1 1 102.77 102.77 3;4 1.078E-05 33225 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.585 30.932 9.6276 5.32 4.9364 9.5428 0 9.594 9 5 5 9 0 9 1 1 1 1 0 1 3271.7 9501 2673 9157 22168;22169 25576;25577 25576 2 IGNLVLLPGAALGIGLTPEAAR Unmodified 2115.2416 0.24157426 479 A2AJL3;D6RG41;A2AJL4 Fggy FGGY carbohydrate kinase domain-containing protein yes no 0 0 0 0 12 0 1 97.596 97.596 3 0.00064686 27925 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.863 38.315 15.022 0 0 0 0 9.594 14 0 0 0 0 9 1 0 0 0 0 1 950.16 9502 479 9158 22170 25578 25578 1 IGNSYFK Unmodified 827.41775 0.41775372 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 9.5 0.5 1 1 55.623 55.623 2;3 0.036613 15806 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.408 10.273 102.82 172.32 161.17 194.67 180.68 174.15 97 171 167 190 187 167 1 2 2 2 2 1 10688 9503 2092 9159 22171;22172 25579;25580 25579 2 IGNTEDGALPKEDEPSVGQVAR Unmodified 2281.1186 0.11861817 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 1 4 0 1 54.597 54.597 3 0.00061318 18477 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.216 34.284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9504 2262 9160 22173 25581 25581 1 IGNTGGMLDNILASK Unmodified 1502.7763 0.776278 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 8.5 0.5 1 1 79.633 79.633 3 2.1864E-05 27832 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.463 52.227 29.444 56.289 78.33 39.049 131.61 75.129 28 56 74 37 130 74 1 2 1 1 2 2 9770.5 9505 2020 9161 22174;22175 25582;25583 25582 2 IGPASQGLQK Unmodified 997.55564 0.55564418 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 0 9.17 1.95 1 2 1 1 1 49.694 49.694 2;3 2.7903E-05 14463 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.48 91.683 684.32 593.27 608.91 722.69 823.06 498.65 643 608 614 708 828 478 5 5 4 6 6 5 210200 9506 1296 9162 22176;22177;22178;22179;22180;22181 25584;25585;25586;25587;25588;25589;25590 25584 7 IGPEPTTDSFIAVMQGDVEGIIPGNALVVDPK Unmodified 3278.6744 0.67444528 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 0 7 0 1 104.07 104.07 4 0.00038499 37190 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 34.512 21.957 0 6.2863 5.8415 6.1365 3.9021 0 0 6 6 6 4 0 0 1 1 1 1 0 576.73 9507 3271 9163 22182 25591 25591 1 IGPILDNSTLQSEVKPILEK Unmodified 2193.2256 0.22564942 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 1 9.4 2.06 1 1 1 1 1 81.716 81.716 3;4 1.304E-10 28819 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.973 81.337 196.97 297.98 437.87 105.21 227.29 362.2 185 297 417 102 223 343 2 5 5 2 3 5 106470 9508 2272 9164 22183;22184;22185;22186;22187 25592;25593;25594;25595;25596;25597;25598 25594 7 IGPILDNSTLQSEVKPILEK Deamidation (N) 2194.2097 0.20966501 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 1 0 1 7 0 1 82.961 82.961 4 2.6349E-06 30077 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.998 56.3 39.155 56.207 44.08 47.651 0 69.29 37 56 46 46 0 65 1 1 1 1 0 1 2253.9 9509 2272 9164 22188 25599 25599 898 1 IGPITPLQFYK Unmodified 1275.7227 0.72270951 2626 Q8R016;E9PY26 Blmh Bleomycin hydrolase yes no 0 0 0 0 9.67 3.99 1 1 2 1 1 80.146 80.146 2;3 1.0579E-10 21745 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 137.98 87.769 152.55 241.27 225.18 375.62 324.82 97.562 143 232 231 356 329 93 3 3 3 4 4 1 129970 9510 2626 9165 22189;22190;22191;22192;22193;22194 25600;25601;25602;25603;25604;25605 25604 6 IGPLGLSPK Unmodified 880.5382 0.53820321 1527 P35979 Rpl12 60S ribosomal protein L12 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 65.325 65.325 2 0.0011686 18409 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.25 65.151 443.19 583.92 516.49 312.39 772.98 608.95 418 585 511 306 763 583 4 5 3 3 4 4 81522 9511 1527 9166 22195;22196;22197;22198 25606;25607;25608;25609;25610;25611 25607 6 IGPYQPNVPVGIDYVIPK Unmodified 1968.072 0.072049316 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 9.75 1.92 1 2 1 83.427 83.427 3;4 1.5969E-06 29632 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.697 53.78 59.689 117.39 74.908 47.326 116.61 43.86 56 115 74 46 115 42 2 3 2 1 3 1 49606 9512 2602 9167 22199;22200;22201;22202 25612;25613;25614;25615 25612 4 IGQESLEFILVQADTPSSPSIDR Unmodified 2501.2649 0.26494806 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 7.75 3.11 1 1 1 1 88.115 88.115 3 7.5855E-28 33051 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.98 90.061 0 49.368 53.041 18.625 47.712 0 0 47 51 18 46 0 0 3 3 2 3 0 37272 9513 71;74;949;1367 9168 22203;22204;22205;22206 25616;25617;25618;25619;25620;25621 25618 6 IGQFQLMQGK Unmodified 1148.6012 0.60121417 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 10.3 0.471 2 1 67.393 67.393 2;3 3.3789E-07 19283 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.54 85.862 0 37.938 85.554 114.02 117.28 87.532 0 37 83 111 120 84 0 1 1 3 3 2 15514 9514 3202 9169 22207;22208;22209 25622;25623;25624 25622 3 IGQGYLIK Unmodified 890.52255 0.52255314 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 0 10 0 1 61.402 61.402 2 0.009758 16671 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.602 18.986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9515 1467 9170 22210 25625 25625 1 IGQLEEQLEQEAK Unmodified 1513.7624 0.76240208 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 5 0.816 1 1 1 73.888 73.888 2;3 0.00010422 27171 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.588 52.602 99.474 62.452 0 120.49 0 0 93 65 0 111 0 0 2 2 0 3 0 0 8143.7 9516 1974 9171 22211;22212;22213 25626;25627;25628 25627 3 IGQLFFGVPPK Unmodified 1201.6859 0.68593008 3041 Q9D1H7 Get4 Golgi to ER traffic protein 4 homolog yes yes 0 0 0 0 3.2 4.4 4 1 84.459 84.459 2;3 0.00038962 22876 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83 55.902 143.75 147.87 181.79 90.568 157.79 156.44 135 150 178 88 158 150 5 7 7 4 6 7 13254 9517 3041 9172 22214;22215;22216;22217;22218 25629;25630;25631;25632;25633;25634;25635;25636;25637 25636 9 IGQLQGEIIPTSFYHQGR Unmodified 2043.0538 0.05377349 3318 Q9R1V7 Adam23 Disintegrin and metalloproteinase domain-containing protein 23 yes yes 0 0 0 0 7.5 0.5 1 1 69.573 69.573 3 3.3679E-07 23072 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.078 63.606 108.62 27.338 116.04 66.352 141.03 38.425 102 28 112 65 139 37 3 1 3 2 3 1 7819.6 9518 3318 9173 22219;22220 25638;25639;25640 25639 3 IGQLYMISK Unmodified 1051.5736 0.57360243 2616 Q8K4R4 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes yes 0 0 0 0 11 0 1 70.262 70.262 3 0.032117 20255 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.309 19.456 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 4907 9519 2616 9174 22221 25641 25641 1 IGQLYYHYYLR Unmodified 1487.7561 0.75613491 2511 Q8C8N2;A0A0N4SVJ6 Scai Protein SCAI yes no 0 0 0 0 12 0 1 62.853 62.853 3 0.0056629 15246 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.286 23.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9520 2511 9175 22222 25642 25642 1 IGQPTLLLYVDAGAETMTQR Unmodified 2176.1198 0.11980414 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 0 13 0 1 87.592 87.592 3 0.00010169 34532 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.059 32.322 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9521 3306 9176 22223 25643 25643 1 IGQSLLK Unmodified 757.46979 0.46978929 2238 Q6PD31;A0A1B0GRL4;Q80VE1;A0A1B0GSQ2;A0A1B0GRP1;A0A1B0GRS7;A0A1B0GRQ7 Trak1 Trafficking kinesin-binding protein 1 yes no 0 0 0 0 5 0 1 35.576 35.576 3 0.060454 8985 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.718 0 98.558 90.123 130.57 93.867 0 108.73 93 93 130 93 0 102 1 1 1 1 0 1 7320.4 9522 2238 9177 22224 25644 25644 1 IGSGFDNIDIK Unmodified 1177.5979 0.59790293 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3;A0A0J9YUR5 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 68.93 68.93 2;3 0.00081228 25314 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.01 21.75 178.82 74.471 0 100.3 145.91 125.04 167 75 0 93 148 120 2 1 0 2 3 2 20044 9523 114 9178 22225;22226;22227;22228 25645;25646;25647;25648 25648 4 IGSGSFGTVYK Unmodified 1114.5659 0.56587452 997 F6SZ47;P28028;Q99N57;F6TUC4 Braf;Raf1 Serine/threonine-protein kinase B-raf;RAF proto-oncogene serine/threonine-protein kinase yes no 0 0 0 0 9 0 1 60.109 60.109 2 1.8109E-07 17945 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.45 80.454 0 0 0 49.256 54.316 58.146 0 0 0 46 56 56 0 0 0 1 1 1 4447.6 9524 997 9179 22229 25649 25649 1 IGSIGIINPFPACK Unmodified 1485.8014 0.80137054 399 A0A2R8VKM5 yes yes 0 0 0 0 11 0 1 81.465 81.465 3 0.0013313 25291 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.32 33.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9525 399 9180 22230 25650 25650 1 IGSLDNITHVPGGGNK Unmodified 1577.8162 0.81616898 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 7.75 2.11 2 3 2 1 58.648 58.648 3;4 3.7093E-18 18647 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.48 102.48 433.96 490.05 833.92 508.1 937.12 406.95 408 482 814 492 927 391 4 6 7 5 7 4 123560 9526 572;46 9181 22231;22232;22233;22234;22235;22236;22237;22238 25651;25652;25653;25654;25655;25656;25657;25658 25654 8 IGSLDNITHVPGGGNKK Unmodified 1705.9111 0.911132 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 1 8.5 0.5 1 1 55.099 55.099 4 0.00089088 16522 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.463 31.099 69.372 74.058 180.69 0 319.03 0 65 74 167 0 305 0 1 1 1 0 2 0 17180 9527 572;46 9182 22239;22240 25659;25660 25659 2 IGSTDNIK Unmodified 846.4447 0.44469675 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 9.33 2.62 1 1 1 46.692 46.692 2 0.022648 12301 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.679 19.576 48.55 113.48 81.037 153.17 200.08 152.06 46 111 83 148 203 148 1 2 1 2 2 2 24188 9528 1424 9183 22241;22242;22243 25661;25662;25663 25662 3 IGSTENLK Unmodified 860.46035 0.46034682 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 8.5 2.69 1 1 1 1 47.915 47.915 2;3 0.0012864 13608 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.68 58.301 681.92 574.5 626.14 594.56 1262.8 1092.9 641 593 630 592 1267 1059 3 4 3 2 3 4 112060 9529 572;46 9184 22244;22245;22246;22247 25664;25665;25666;25667 25665 4 IGSTIFGER Unmodified 978.51345 0.51344502 251 A0A1B0GRP7;Q9Z2Y8 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 8 0 1 60.281 60.281 2 0.0027988 18745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.163 38.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9530 251 9185 22248 25668 25668 1 IGSTTNPFLDIPHDPNAAVYK Unmodified 2269.1379 0.13789705 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 7.67 0.471 1 2 73.442 73.442 3;4 3.1166E-05 24894 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.457 41.42 127.46 91.65 140.16 92.065 65.458 49.036 120 93 139 93 65 46 2 1 2 2 1 1 15970 9531 814 9186 22249;22250;22251 25669;25670;25671 25671 3 IGSYLSASTR Unmodified 1053.5455 0.54547343 3171 Q9EQC5 Scyl1 N-terminal kinase-like protein yes yes 0 0 0 0 9 0 1 54.28 54.28 2 0.037321 15146 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.112 26.6 0 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 2433.4 9532 3171 9187 22252 25672 25672 1 IGTIYEGASNIQLNTIAK Unmodified 1905.0207 0.020742027 3127 Q9DBL1 Acadsb Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 8 0 1 75.786 75.786 4 0.052721 26060 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 28.869 11.588 0 29.792 0 61.208 0 0 0 28 0 56 0 0 0 1 0 1 0 0 2595.8 9533 3127 9188 22253 25673 25673 1 IGTVLGFNVGR Unmodified 1131.64 0.64004252 278 G3UYW1;A0A1D5RLV7;Q6VNB8 Wdfy3 WD repeat and FYVE domain-containing protein 3 yes no 0 0 0 0 11.5 0.5 1 1 73.03 73.03 2 0.00042377 18889 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.692 67.73 59.808 108.73 65.106 101.39 39.824 58.56 56 107 65 97 42 56 1 2 1 2 1 1 10201 9534 278 9189 22254;22255 25674;25675 25675 2 IGTVSPLFQK Unmodified 1088.623 0.62299547 950 Q68FL6;E9QB02;F6W0G8 Mars Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 0 10.5 0.5 1 1 69.643 69.643 2 0.00016078 19878 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.02 48.951 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 10221 9535 950 9190 22256;22257 25676;25677 25677 2 IGTYQLAIVAK Unmodified 1175.6914 0.69140938 2941 Q9CQT1;F6YY88 Mri1 Methylthioribose-1-phosphate isomerase yes no 0 0 0 0 10 0 1 71.276 71.276 3 0.001103 21092 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.574 36.777 39.421 0 47.017 57.391 53.942 58.157 37 0 46 56 56 56 1 0 1 1 1 1 8009.3 9536 2941 9191 22258 25678 25678 1 IGVAIGDQILDLSVIK Unmodified 1652.9713 0.97127264 1521 P35505 Fah Fumarylacetoacetase yes yes 0 0 0 0 9 0 1 96.193 96.193 3 0.0036501 34396 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.252 25.887 20.387 0 0 20.767 0 29.848 19 0 0 19 0 28 1 0 0 1 0 1 2356.5 9537 1521 9192 22259 25679 25679 1 IGVDHVAR Unmodified 865.477 0.47699993 739 O88545;D3Z0F5;F6QK86 Cops6 COP9 signalosome complex subunit 6 yes no 0 0 0 0 8.67 3.09 1 1 1 34.217 34.217 3 0.0024899 8043 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.265 58.266 39.588 0 19.046 103.47 0 39.442 37 0 19 102 0 37 1 0 1 2 0 1 7585.9 9538 739 9193 22260;22261;22262 25680;25681;25682 25680 3 IGVEEFSTLVAES Unmodified 1379.682 0.68202649 1504 P32848 Pvalb Parvalbumin alpha yes yes 0 0 0 0 5.5 0.5 1 1 91.031 91.031 2 0.00011743 34545 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.64 71.568 0 23.896 0 10.93 0 14.924 0 23 0 10 0 14 0 2 0 1 0 1 2842.4 9539 1504 9194 22263;22264 25683;25684 25683 2 IGVFPPAISISSIALLPSSVR Unmodified 2123.2354 0.23542625 2616 Q8K4R4;A0A0A0MQ88 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 0 1 0 2 100.52 100.52 3 1.3695E-49 34058 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 153.21 137.27 8.5462 0 12.275 15.548 12.24 5.33 8 0 12 15 12 5 3 0 2 2 3 2 3992.7 9540 2616 9195 22265;22266 25685;25686;25687;25688;25689 25688 5 IGVGAMTWSPLACGIVSGK Unmodified 1902.9696 0.96957485 802 Q3UPV6;E0CXZ9;P62482 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 0 12 0.816 1 1 1 86.78 86.78 3 7.838E-09 27484 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.676 58.278 95.358 58.65 55.858 27.275 75.794 106.57 92 56 56 28 74 102 2 1 1 1 1 2 118690 9541 802 9196 22267;22268;22269 25690;25691;25692 25690 3 IGVILIGHQR Unmodified 1104.6768 0.67676237 1054 G1K381;Q62413 Epha6 Receptor protein-tyrosine kinase;Ephrin type-A receptor 6 yes no 0 0 0 0 12 0 1 55.819 55.819 3 0.0076087 12506 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.722 25.346 0 8.9294 38.676 18.462 0 29.848 0 9 37 19 0 28 0 1 1 1 0 1 2095.1 9542 1054 9197 22270 25693 25693 1 IGVNQPK Unmodified 754.43374 0.43373813 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 8.5 0.5 1 1 42.572 42.572 2 0.026931 10378 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.734 36.332 118.64 173.71 77.394 259.9 232.21 231.09 111 172 79 246 241 223 1 2 1 2 2 2 25682 9543 1823 9198 22271;22272 25694;25695 25694 2 IGVTVLSR Unmodified 843.5178 0.51780212 1582 P48758;A0A1B0GRG8 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 10.7 1.7 1 1 1 55.492 55.492 2 0.005356 15875 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.7 44.911 325.2 134.3 413.35 316.14 425.42 264.08 306 139 404 317 418 251 2 1 2 2 2 2 86121 9544 1582 9199 22273;22274;22275 25696;25697;25698 25696 3 IGYNPATVPFVPISGWHGDNMLEPSPNMPWFK Unmodified 3597.7214 0.72135266 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 0 10 0 1 95.541 95.541 4 0.011187 31189 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 26.826 16.31 9.6335 4.6704 0 0 0 0 9 5 0 0 0 0 1 1 0 0 0 0 2477.1 9545 1729 9200 22276 25699 25699 1 IGYPAPNFK Unmodified 1005.5284 0.5283668 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 9.5 0.5 1 1 61.641 61.641 2 0.00059952 16673 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.52 89.046 108.31 69.22 373.67 208.39 374.92 203.16 102 74 353 203 371 195 1 1 3 2 3 2 139390 9546 604 9201 22277;22278 25700;25701;25702;25703 25702 4 IHAYSQLLESYR Unmodified 1478.7518 0.75177781 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 9 0 1 59.825 59.825 3 0.0097738 17830 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.815 23.433 0 58.467 66.822 0 75.098 67.147 0 56 65 0 74 65 0 1 1 0 1 1 6218.2 9547 2829 9202 22279 25704 25704 1 IHCLDILFAFTK Unmodified 1476.7799 0.77990682 111 A0A0J9YTW6;B1AWN6;A2ASI5;A2APX8;F7D6J5;F7D6K4;F6U329;A0A0J9YUW5;Q9WTU3;K3W4P8;Q6QIY3 Scn2a1;Scn3a;Scn1a;Scn8a;Scn10a Sodium channel protein;Sodium channel protein type 8 subunit alpha;Sodium channel protein type 10 subunit alpha no no 0 0 0 0 11 0 1 87.184 87.184 3 0.049327 27684 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.447 13.869 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 3027.1 9548 111 9203 22280 25705 25705 1 IHCLENVDK Unmodified 1126.5441 0.54409322 2148;2186;893 Q68FG2;Q3UGX2;E9Q397;P15508;Q62261;A0A0A0MQG2 Sptbn2;Sptb;Sptbn1 Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 6.5 0.5 1 1 46.627 46.627 3 0.00030758 12944 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.57 65.814 117.7 335.93 434.18 450.54 181.22 510.77 111 330 439 439 185 484 1 2 2 2 1 2 65543 9549 2186;893;2148 9204 22281;22282 25706;25707 25707 2 IHDPEAK Unmodified 808.40792 0.40791731 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 5 0.816 1 1 1 34.549 34.549 3 0.0053793 8520 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.407 43.441 226.39 108 271.14 276.01 98.041 254.11 213 111 269 269 102 241 2 1 2 2 1 2 21308 9550 2322 9205 22283;22284;22285 25708;25709;25710 25709 3 IHDPQLLTER Unmodified 1220.6513 0.65133548 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5 0 1 46.325 46.325 3 0.049634 14141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.293 18.423 0 39.368 0 39.798 34.198 77.908 0 37 0 37 37 74 0 1 0 1 1 1 6984 9551 2803 9206 22286 25711 25711 1 IHEGCEEPATHNALAK Unmodified 1775.8261 0.82608174 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.75 3.63 1 2 1 39.522 39.522 4;5 1.7548E-45 11875 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.76 141.63 560.9 434.63 778.99 854.69 729.59 95.213 528 445 776 837 727 93 5 4 5 6 4 1 131870 9552 2185 9207 22287;22288;22289;22290 25712;25713;25714;25715;25716;25717 25713 6 IHETNLK Unmodified 853.46577 0.46576654 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 37.777 37.777 3 0.0053709 8841 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.299 39.722 275.99 173.1 175.44 194.42 189.11 241.92 259 176 176 185 195 232 3 2 2 2 2 3 28742 9553 2843 9208 22291;22292;22293 25718;25719;25720 25719 3 IHETNLKK Unmodified 981.56073 0.56072956 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 8 0 1 38.002 38.002 4 0.012097 8257 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.8 29.23 148.23 0 153.95 121.98 0 157.77 139 0 148 120 0 148 1 0 1 1 0 1 8536.2 9554 2843 9209 22294 25721 25721 1 IHEWVPPSTPYK Unmodified 1452.7402 0.74015049 219 Q7TMF3;A0A0R4J275 Ndufa12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 0 8 0 1 57.357 57.357 3 0.00047219 17300 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.498 48.23 0 69.16 0 71.045 0 88.478 0 65 0 65 0 83 0 1 0 1 0 1 7217.9 9555 219 9210 22295 25722 25722 1 IHFPLATYAPVISAEK Unmodified 1755.956 0.95595693 1313;1794;44 A0A0A0MQA5;P68368;P05213;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 8.27 4.56 6 2 3 6 3 2 74.755 74.755 2;3;4 4.3379E-34 19571 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152 124.48 11780 10818 9970.3 10389 13822 12388 11083 11043 10027 10213 14065 11973 22 25 20 20 22 16 4539300 9556 44;1313;1794 9211 22296;22297;22298;22299;22300;22301;22302;22303;22304;22305;22306;22307;22308;22309;22310;22311;22312;22313;22314;22315;22316;22317 25723;25724;25725;25726;25727;25728;25729;25730;25731;25732;25733;25734;25735;25736;25737;25738;25739;25740;25741;25742;25743;25744;25745;25746;25747;25748;25749;25750;25751;25752;25753;25754;25755;25756;25757;25758;25759;25760 25752 38 IHFPLVTYAPIISAEK Unmodified 1798.0029 0.0029071185 3223 Q9JJZ2 Tuba8 Tubulin alpha-8 chain yes yes 0 0 0 0 11 0 2 79.733 79.733 3;4 3.8288E-05 24565 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.497 61.938 0 46 110.36 0 135.98 0 0 46 102 0 130 0 0 1 1 0 1 0 28281 9557 3223 9212 22318;22319 25761;25762 25762 2 IHFQHTAELITQLIK Unmodified 1791.0043 0.004304102 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 11.5 0.5 1 1 79.504 79.504 4 0.003899 23714 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.3 25.347 49.358 0 0 119.74 84.221 49.036 46 0 0 111 84 46 1 0 0 3 2 1 7268.1 9558 2322 9213 22320;22321 25763;25764;25765 25763 3 IHGEIDIK Unmodified 923.50763 0.50763136 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 48.074 48.074 2;3 0.0019109 14511 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.442 35.177 0 453.52 430.17 378.65 568.79 404.42 0 433 423 378 572 392 0 4 2 3 3 2 70536 9559 1282 9214 22322;22323;22324;22325 25766;25767;25768;25769 25767 4 IHGVGFK Unmodified 756.42826 0.42825883 1754 P62900;A0A0A6YX26;A0A0A6YXL3 Rpl31 60S ribosomal protein L31 yes no 0 0 0 0 9.5 0.5 1 1 45.742 45.742 3 0.0053281 10017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.584 75.43 78.478 125.89 262.57 218.17 236.59 159.26 74 120 259 218 241 153 1 1 2 2 2 1 33589 9560 1754 9215 22326;22327 25770;25771 25771 2 IHGVVAFK Unmodified 869.51232 0.51232281 2968 Q9CS84;E0CY11;A0A0G2JE65 Nrxn1 Neurexin-1 yes no 0 0 0 0 10 0 1 51.637 51.637 3 0.0032074 12257 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.958 44.938 0 0 77.155 65.401 55.572 0 0 0 74 65 56 0 0 0 1 1 1 0 12623 9561 2968 9216 22328 25772 25772 1 IHIMPSLNPDGFEK Unmodified 1596.797 0.79701344 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 9 0 1 68.131 68.131 3 4.3354E-05 21742 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.204 52.646 48.713 74.698 45.045 0 45.122 87.19 46 74 46 0 46 83 1 1 1 0 1 1 5435.5 9562 1868 9217 22329 25773 25773 1 IHIPFISK Unmodified 953.56984 0.56983769 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 8 4.97 1 1 1 68.982 68.982 3 0.0049285 23581 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.213 53.685 148.82 232.45 286.19 355.35 236.84 541.17 139 226 283 344 242 514 2 2 2 4 2 5 52989 9563 1692 9218 22330;22331;22332 25774;25775;25776;25777;25778 25774 5 IHLAQSLHK Unmodified 1045.6033 0.60326308 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 0 11 0 1 43.736 43.736 4 0.034284 9161 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.599 14.978 0 0 0 50.278 0 39.442 0 0 0 46 0 37 0 0 0 1 0 1 3737.3 9564 3186 9219 22333 25779 25779 1 IHLAVTEMASLFPK Unmodified 1555.8432 0.84323535 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 11 0 1 82.061 82.061 3 0.047602 25574 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 33.685 9.3978 0 48.16 46.882 0 66.005 57.813 0 46 46 0 65 56 0 1 1 0 1 1 4215.3 9565 2046 9220 22334 25780 25780 1 IHLMQNGK Deamidation (N) 940.48004 0.4800364 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 1 0 0 7.5 0.5 1 1 48.153 48.153 3 0.013125 13727 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.915 39.105 99.151 51.839 63.339 75.894 64.504 0 93 56 65 74 65 0 1 1 1 1 1 0 12366 9566 223;1553 9221 22335;22336 25781;25782 25781 76 2 IHLMQNGKR Deamidation (N) 1096.5811 0.58114743 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 1 0 1 10 0 1 41.082 41.082 4 0.0054135 8183 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.69 56.011 0 69.16 0 69.166 99.878 105.88 0 65 0 65 102 102 0 1 0 1 1 1 5675.3 9567 223;1553 9222 22337 25783 25783 76 1 IHLMQNGKR Unmodified 1095.5971 0.59713184 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 0 0 1 11 0 1 43.964 43.964 4 0.047727 9302 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.432 3.9069 0 144.7 0 127.88 0 0 0 136 0 117 0 0 0 1 0 1 0 0 18621 9568 223;1553 9222 22338 25784 25784 1 IHMGNCAENTAK Unmodified 1344.5915 0.59145412 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 6 0 1 38.909 38.909 3 9.791E-09 10176 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.67 95.306 0 29.792 0 0 45.781 67.984 0 28 0 0 46 65 0 1 0 0 1 1 4199.4 9569 2622 9223 22339 25785 25785 1 IHMVYSK Unmodified 876.45276 0.45275902 252 A0A1B0GRR8;Q62376;A0A1B0GR44;A0A1B0GSX5;A0A1B0GR50 Snrnp70 U1 small nuclear ribonucleoprotein 70 kDa yes no 0 0 0 0 10 0 1 46.606 46.606 3 0.052423 10351 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.127 27.979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9570 252 9224 22340 25786 25786 1 IHNFGVIQEK Unmodified 1183.635 0.63495714 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 9 0 1 51.87 51.87 3 0.017969 14035 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.971 28.729 79.128 54.248 0 70.004 55.36 0 74 56 0 65 56 0 1 1 0 1 1 0 5673.5 9571 577 9225 22341 25787 25787 1 IHNLALNCCTQLADLYR Unmodified 2074.0088 0.0088139074 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 0 9 0 1 65.829 65.829 3 0.0012206 20688 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.314 30.825 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 4607.5 9572 366 9226 22342 25788 25788 1 IHPQTIISGWR Unmodified 1306.7146 0.71460444 1823 P80314;A0A1W2P7B7;A0A1W2P828 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 10 1 1 1 57.044 57.044 3 0.00055352 14378 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.655 25.596 0 57.634 116.64 0 0 99.138 0 56 111 0 0 93 0 1 1 0 0 1 15941 9573 1823 9227 22343;22344 25789;25790 25790 2 IHPTSVISGYR Unmodified 1228.6564 0.65642086 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 11 0 1 45.65 45.65 3 0.024089 9992 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.809 26.607 59.76 65.13 0 59.627 84.079 0 56 65 0 56 83 0 1 1 0 1 1 0 8885.4 9574 1356 9228 22345 25791 25791 1 IHPVDKLTIQGLK Unmodified 1460.8715 0.87149901 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 10.7 1.7 1 1 1 60.023 60.023 4 0.00014666 18141 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.169 56.76 472.83 513.15 746.92 559.28 789.24 819.62 445 512 744 566 806 790 3 3 4 4 4 4 38906 9575 2843 9229 22346;22347;22348 25792;25793;25794;25795 25792 4 IHPVSTMVK Unmodified 1010.5583 0.55828672 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 0 9.5 1.12 1 1 1 1 46.056 46.056 3 0.00014075 10150 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.18 73.016 603.77 1032.7 1071.3 1343.3 1449 961.04 566 1023 1052 1303 1470 923 2 3 3 3 3 3 173990 9576 1389 9230 22349;22350;22351;22352 25796;25797;25798;25799 25798 4 IHQSGAK Unmodified 739.39769 0.39768698 1822 P80313;A0A0N4SV00;A0A0N4SUI8 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 11 0 1 26.654 26.654 3 0.049399 3816 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.358 28.838 0 9.576 0 0 12.552 0 0 9 0 0 12 0 0 1 0 0 1 0 300.7 9577 1822 9231 22353 25800 25800 1 IHSASSNR Unmodified 870.43078 0.43077802 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 0 7 0.816 1 1 1 17.801 17.801 3 0.0014746 2832 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.25 71.396 6.3874 5.1047 4.1769 7.4021 3.0311 8.4415 6 5 4 7 3 8 2 1 1 2 1 2 2943 9578 2792 9232 22354;22355;22356 25801;25802;25803 25802 3 IHSEILKK Unmodified 966.58622 0.58621603 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 1 9 0 1 44.515 44.515 4 0.018625 10750 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.157 23.587 59.269 73.48 75.361 0 0 88.478 56 74 74 0 0 83 1 1 1 0 0 1 4888.5 9579 3331 9233 22357 25804 25804 1 IHSEIVK Unmodified 824.4756 0.47560295 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 6.5 0.5 1 1 41.094 41.094 3 0.0042542 11262 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.12 23.482 654.07 638.4 798.85 574.9 148.84 805.91 617 654 791 561 148 760 4 4 3 2 1 4 46243 9580 2555 9234 22358;22359 25805;25806;25807;25808 25806 4 IHTDFEK Unmodified 888.43413 0.43413207 2999 Q9CZ30 Ola1 Obg-like ATPase 1 yes yes 0 0 0 0 8 3.56 1 1 1 44.999 44.999 3 0.0068771 13568 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.241 36.225 409.75 371.64 499.96 349.98 370.22 486.19 386 382 499 350 383 466 2 2 3 2 2 3 30245 9581 2999 9235 22360;22361;22362 25809;25810;25811 25811 3 IHTGLLK Unmodified 780.48577 0.48577371 153 Q99K01;A0A0R4J034 Pdxdc1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes no 0 0 0 0 10 0 1 47.028 47.028 3 0.0063853 10566 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.244 19.44 0 0 40.034 0 0 59.696 0 0 37 0 0 56 0 0 1 0 0 1 5345.9 9582 153 9236 22363 25812 25812 1 IHTLEDFQR Unmodified 1157.5829 0.58292157 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 5 0 1 49.56 49.56 3 0.030164 15721 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.137 29.698 39.471 0 38.597 27.796 27.013 29.077 37 0 37 28 28 28 1 0 1 1 1 1 3056.3 9583 2879 9237 22364 25813 25813 1 IHTLELK Unmodified 852.5069 0.50690308 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 8 0 1 50.66 50.66 3 0.012949 14202 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.975 15.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9584 2701 9238 22365 25814 25814 1 IHVSDQELQSANASVDDSR Unmodified 2069.9614 0.96138925 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 3 0 1 49.313 49.313 3 4.1505E-16 16367 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.384 69.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9585 1876 9239 22366 25815 25815 1 IHVSDQELQSANASVDDSRLEELK Unmodified 2682.3097 0.30966642 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 1 3.5 0.5 1 1 61.954 61.954 4 5.8897E-05 21770 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.432 34.023 39.613 56.913 0 109.47 107.45 105.67 37 56 0 102 111 102 1 2 0 2 2 2 17763 9586 1876 9240 22367;22368 25816;25817 25817 2 IHYLDTTTLIEPAPR Unmodified 1738.9254 0.92538508 1571 P47941;A0A338P6Q0;A0A338P675 Crkl Crk-like protein yes no 0 0 0 0 7.5 0.5 1 1 64.061 64.061 3 0.00011693 21106 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.261 52.517 99.269 0 87.353 43.831 65.977 0 93 0 83 46 65 0 1 0 1 1 1 0 5878.5 9587 1571 9241 22369;22370 25818;25819 25818 2 IHYLDTTTLIEPVAR Unmodified 1740.941 0.94103514 2166 Q64010;Q5ND50;F7D232 Crk Adapter molecule crk no no 0 0 0 0 7.5 0.5 1 1 67.072 67.072 3 8.9885E-05 21912 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.507 70.405 0 67.727 85.743 0 58.576 0 0 65 83 0 56 0 0 2 2 0 1 0 16729 9588 2166 9242 22371;22372 25820;25821 25821 2 IIAANSITLAK Unmodified 1113.6758 0.67575932 2819 Q924B0;O55023 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 11 0.816 1 1 1 67.373 67.373 2;3 5.4566E-08 19312 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.61 83.88 118.06 204.63 267.15 247.73 45.521 138.58 111 204 269 242 46 130 1 3 3 3 1 1 46646 9589 2819 9243 22373;22374;22375 25822;25823;25824 25822 3 IIACDGGGGALGHPK Unmodified 1421.7085 0.70853279 1610 P52503;A0A1Y7VM38;A0A1Y7VKP8 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 0 6.67 0.471 1 2 49.275 49.275 3;4 5.4456E-17 14072 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.35 101.81 137.74 164.76 153.91 120.81 120.78 211.58 130 166 157 121 120 204 2 2 2 2 1 3 31853 9590 1610 9244 22376;22377;22378 25825;25826;25827 25826 3 IIADTFLFK Unmodified 1066.6063 0.60628277 1092 G3XA48;P58044 Idi1 Isopentenyl-diphosphate Delta-isomerase 1 yes no 0 0 0 0 10 0 1 85.995 85.995 2 0.00050896 27514 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.08 57.651 0 0 47.171 58.397 0 0 0 0 46 56 0 0 0 0 1 1 0 0 6475.2 9591 1092 9245 22379 25828 25828 1 IIAEGANGPTTPEADK Deamidation (N) 1583.7679 0.76788138 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 1 0 0 3.5 0.5 1 1 56.406 56.406 2;3 0.00032064 19620 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.173 48.595 0 29.792 0 19 48.116 0 0 28 0 19 46 0 0 1 0 1 1 0 11405 9592 1458 9246 22380;22381 25829;25830 25829 536 2 IIAEGANGPTTPEADK Unmodified 1582.7839 0.7838658 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 54.508 54.508 3 1.1414E-05 18497 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.12 53.739 39.212 115.02 26.134 69.693 157.11 113.84 37 111 28 65 157 111 1 2 1 1 2 2 20193 9593 1458 9246 22382;22383 25831;25832 25831 2 IIAEGANGPTTPEADKIFLER Deamidation (N) 2242.1481 0.14812739 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 1 0 1 6.14 2.9 2 2 2 1 71.164 71.164 3;4 8.2505E-15 26452 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.251 70.769 119.35 179.46 215.69 208.81 249.47 181.53 112 177 212 204 251 176 3 5 5 4 4 4 43998 9594 1458 9247 22384;22385;22386;22387;22388;22389;22390 25833;25834;25835;25836;25837;25838;25839;25840 25840 536 8 IIAEGANGPTTPEADKIFLER Unmodified 2241.1641 0.1641118 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 1 5.67 0.471 1 2 69.337 69.337 3;4 5.0453E-13 25140 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.44 92.386 88.864 129.7 157.38 120.13 145.98 183.45 84 130 158 121 148 176 2 3 3 3 2 3 23474 9595 1458 9247 22391;22392;22393 25841;25842;25843 25841 3 IIAELNETWEEK Unmodified 1473.7351 0.73512469 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;Q60575;A2AH75;E9Q9B0;O35071 Kif1a;Kif1b;Kif1c Kinesin-like protein;Kinesin-like protein KIF1A;Kinesin-like protein KIF1B;Kinesin-like protein KIF1C yes no 0 0 0 0 5.5 0.5 1 1 80.274 80.274 3 8.1475E-05 30326 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.845 62.619 79.945 72.888 27.357 30.604 29.288 0 75 74 28 28 28 0 2 2 1 1 1 0 5055.7 9596 24 9248 22394;22395 25844;25845 25844 2 IIAFVGSPVEDNEKDLVK Unmodified 1972.0517 0.051707805 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 1 8 0 1 75.283 75.283 3 0.00017382 25774 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.055 47.175 39.613 17.545 0 0 38.702 0 37 19 0 0 37 0 1 1 0 0 1 0 4173.1 9597 1183 9249 22396 25846 25846 1 IIAGDKEVVIAQK Unmodified 1382.8133 0.81331543 2001 Q3UPL0 Sec31a Protein transport protein Sec31A yes yes 0 0 0 1 8 0 1 60.597 60.597 3 0.039631 18838 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.184 23.087 139.09 78.933 0 100.18 78.229 116.09 130 83 0 93 83 111 1 1 0 1 1 1 5424.9 9598 2001 9250 22397 25847 25847 1 IIAHTQMR Unmodified 968.52257 0.52256992 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 0 9 0 1 34.657 34.657 3 0.0034404 6663 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.809 52.105 119.1 0 0 0 165.27 0 111 0 0 0 158 0 1 0 0 0 1 0 5231.6 9599 1467 9251 22398 25848 25848 1 IIALDGDTK Unmodified 944.51786 0.51786169 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 8 2.92 2 1 1 62.205 62.205 2;3 0.00018684 20232 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.71 50.469 255.91 237.11 250.13 157.6 422.93 114.29 241 243 252 158 415 111 2 2 2 1 3 2 30891 9600 1537 9252 22399;22400;22401;22402 25849;25850;25851;25852 25851 4 IIALPHDNR Unmodified 1047.5825 0.58252764 2519 Q8CBE3;H3BJB3 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 10 2.16 1 1 1 47.513 47.513 3 0.0036554 12792 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.27 36.932 39.26 45.705 120.56 243.97 128.95 174.34 37 46 120 232 130 167 1 1 2 3 1 2 19721 9601 2519 9253 22403;22404;22405 25853;25854;25855 25853 3 IIAPANLERPVR Unmodified 1347.7987 0.79866842 18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WR90;A0A087WNT3 Abi2 Abl interactor 2 yes no 0 0 0 1 13 0 1 51.492 51.492 3 0.0083315 17040 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.476 1.5604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9602 18 9254 22406 25856 25856 1 IIAPPER Unmodified 794.46504 0.46503826 1673;1781;1791;896;2366 P60710;E9Q1F2;P63260;B1ATY1;E9Q3M9;P68033;P68134;P62737;P63268;Q8BFZ3 Actb;Actg1;2010300C02Rik;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 7.8 2.79 1 1 1 1 1 46.255 46.255 2 0.0061884 12149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 141.55 60.451 11134 9402.3 10942 10328 11290 9518.6 10481 9707 11104 10240 11554 9163 9 8 8 9 8 6 3278600 9603 1673;1781;896;1791;2366 9255 22407;22408;22409;22410;22411 25857;25858;25859;25860;25861;25862;25863;25864;25865 25863 9 IIAPPERK Unmodified 922.56 0.56000128 1673;1781;1791;2366 P60710;E9Q1F2;P63260;B1ATY1;P68033;P68134;P62737;P63268;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 1 10 1.87 1 1 1 1 43.381 43.381 2;3 0.0085179 10278 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.296 43.738 5108.9 5946.6 8742.1 6988.6 6701 8277 4817 6050 8710 6986 6985 7941 5 6 5 6 6 5 1148200 9604 1673;1781;1791;2366 9256 22412;22413;22414;22415 25866;25867;25868;25869;25870;25871 25869 6 IIATAHIK Unmodified 865.53854 0.53853756 2084 Q60738 Slc30a1 Zinc transporter 1 yes yes 0 0 0 0 9.5 0.5 1 1 47.987 47.987 3 0.0022441 10893 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.429 25.448 98.968 0 212.87 262.3 198.1 216.08 93 0 208 255 208 208 1 0 2 2 2 2 12659 9605 2084 9257 22416;22417 25872;25873 25873 2 IICILSHPIK Unmodified 1192.7002 0.70019993 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 6.5 5.52 4 1 2 1 72.252 72.252 2;3 6.1927E-12 17021 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 169.12 123.49 1313.4 1030.7 1252.8 1089.6 1409.7 1382.3 1234 1060 1256 1069 1436 1333 10 10 11 9 13 13 746980 9606 1595 9258 22418;22419;22420;22421;22422;22423;22424;22425 25874;25875;25876;25877;25878;25879;25880;25881;25882;25883;25884;25885;25886;25887;25888;25889;25890 25886 17 IICQGFTGK Unmodified 1022.5219 0.52190122 3337 Q9WUM5;A0A0N4SVU4 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 0 10.8 1.48 1 1 1 1 58.181 58.181 2 0.00097106 17100 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.98 71.25 69.184 340.44 550.49 267.87 428.79 239.42 65 333 539 278 426 234 1 4 4 3 3 2 96142 9607 3337 9259 22426;22427;22428;22429 25891;25892;25893;25894 25891 4 IIDAALR Unmodified 770.46504 0.46503826 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 56.348 56.348 2 0.0090417 16820 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.08 4.1873 599.04 273.77 437.2 260.84 594.75 668.47 562 281 415 253 602 643 3 2 2 2 3 3 289690 9608 1360 9260 22430;22431;22432 25895;25896;25897 25896 3 IIDDSEITKEDDALWPPPDR Unmodified 2324.1172 0.11722119 0 G3UZW7;A0A023T778;Q9CQL1;P61327 Magohb;Magoh Protein mago nashi homolog 2;Protein mago nashi homolog yes no 0 0 0 1 4 0 1 74.548 74.548 3 0.00014849 27450 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.428 44.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9609 0 9261 22433 25898 25898 1 IIDGGAAQK Unmodified 871.47633 0.47633123 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2 Dlg2 Disks large homolog 2 yes no 0 0 0 0 7 1 1 1 47.371 47.371 2 0.0060279 14086 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.594 28.428 39.564 75.483 35.031 66.861 111.42 77.35 37 74 37 65 112 74 1 2 1 2 2 1 13965 9610 690 9262 22434;22435 25899;25900 25899 2 IIDIIDTTGSGDVNTATEVEPK Deamidation (N) 2288.1271 0.12711717 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 1 0 0 5 0 1 80.341 80.341 3 0.00094024 30314 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.415 34.666 0 29.478 18.789 0 19.874 0 0 28 19 0 19 0 0 1 1 0 1 0 1918.4 9611 2178 9263 22436 25901 25901 854 1 IIDLIIPR Unmodified 951.6117 0.6117025 3368 Q9Z110 Aldh18a1 Delta-1-pyrroline-5-carboxylate synthase;Glutamate 5-kinase;Gamma-glutamyl phosphate reductase yes yes 0 0 0 0 10 0 1 83.995 83.995 2 0.039353 26651 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.252 15.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9612 3368 9264 22437 25902 25902 1 IIDLIPDGYPQISCLPK Unmodified 1941.0281 0.028135591 1846 P97370 Atp1b3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 91 91 3;4 7.2478E-05 32271 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.716 36.375 84.279 78.018 86.138 57.396 47.31 69.29 79 75 84 57 46 65 3 3 3 3 1 2 14594 9613 1846 9265 22438;22439;22440;22441 25903;25904;25905;25906;25907 25905 5 IIDTAGLSEAVGLLMCR Unmodified 1817.9379 0.93794038 2546 Q8CH72;A2AGS0;A2AGS1 Trim32 E3 ubiquitin-protein ligase TRIM32 yes no 0 0 0 0 10 0 1 99.059 99.059 3 0.023771 32329 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 33.872 16.172 0 0 0 15.217 4.531 0 0 0 0 14 5 0 0 0 0 1 1 0 1356.8 9614 2546 9266 22442 25908 25908 1 IIDVVYNASNNELVR Unmodified 1717.8999 0.89989861 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 7 0 1 76.861 76.861 3 0.00029048 27101 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.387 33.441 0 48.007 56.059 37.1 0 49.036 0 46 56 37 0 46 0 1 1 1 0 1 5811.3 9615 1714 9267 22443 25909 25909 1 IIEDEEKPVDLTAGR Unmodified 1683.8679 0.86792978 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 1 4 0 1 59.52 59.52 3 0.00027625 20819 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.466 61.377 88.644 82.335 0 80.882 0 0 83 83 0 74 0 0 1 1 0 1 0 0 8089 9616 3285 9268 22444 25910 25910 1 IIEEAPAPGINPEVR Unmodified 1603.857 0.85697116 2878 Q99MR8;A0A0G2JF64 Mccc1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes no 0 0 0 0 4 0 1 62.719 62.719 2 0.000257 22253 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.289 33.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1599.7 9617 2878 9269 22445 25911 25911 1 IIEETLALK Unmodified 1028.6118 0.61176208 2971 Q9CVB6;A0A087WRT2 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 8.2 2.48 1 2 1 1 75.285 75.285 2;3 0.0004745 25715 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.099 47.838 375.09 171.24 293.08 243.68 333.54 134.88 352 176 287 241 334 130 5 2 3 3 4 2 71272 9618 2971 9270 22446;22447;22448;22449;22450 25912;25913;25914;25915;25916 25915 5 IIEGGAAHK Unmodified 894.49232 0.49231565 407;767 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8;S4R2T8 Dlg4;Dlg1 Disks large homolog 4;Disks large homolog 1 no no 0 0 0 0 9 2.94 1 1 1 38.96 38.96 3 0.00028954 10340 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.65 47.441 459.11 216.89 199.85 106.31 540.35 327.12 430 222 195 111 532 315 3 2 1 1 3 2 43313 9619 407;767 9271 22451;22452;22453 25917;25918;25919 25917 3 IIEGGAAQK Unmodified 885.49198 0.4919813 538 Q52KF7;A2BEE9;P70175 Dlg3 Disks large homolog 3 yes no 0 0 0 0 8 2.92 2 1 1 45.994 45.994 2;3 0.0012838 12813 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.67 40.104 39.468 123.82 71.616 124.32 136.7 86.735 37 120 74 120 139 83 1 2 1 2 2 1 10016 9620 538 9272 22454;22455;22456;22457 25920;25921;25922;25923 25922 4 IIELSQTTAK Unmodified 1102.6234 0.6233894 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 8 0 1 60.685 60.685 2 1.7856E-05 18944 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 20.761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9621 1180 9273 22458 25924 25924 1 IIENLHDVAYK Unmodified 1313.698 0.69795133 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 0 8.67 3.09 1 1 1 60.591 60.591 3 3.6461E-08 21170 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.09 80.306 689.86 911.75 724 779.59 596.34 794.2 650 912 755 763 606 758 3 4 4 4 3 3 141970 9622 3117 9274 22459;22460;22461 25925;25926;25927;25928 25928 4 IIEQCLNK Unmodified 1016.5325 0.5324659 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 10 3 2 2 55.68 55.68 2;3 0.009936 17340 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.933 40.217 644.99 241.76 496.69 359.47 406.3 494.76 605 259 488 362 411 475 4 3 3 3 3 4 43090 9623 2754 9275 22462;22463;22464;22465 25929;25930;25931;25932 25930 4 IIETLSQQLQAK Unmodified 1370.7769 0.77692993 1261 O70591 Pfdn2 Prefoldin subunit 2 yes yes 0 0 0 0 11 0 1 78.498 78.498 2 1.5974E-05 23890 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.93 57.619 0 0 0 9.2942 28.861 0 0 0 0 9 28 0 0 0 0 1 1 0 2230.3 9624 1261 9276 22466 25933 25933 1 IIEVSGQK Unmodified 872.49673 0.49673232 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 7 0 1 53.175 53.175 2 0.0078284 15970 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.44 45.833 230.93 170.88 175.77 0 399.71 209.26 217 178 173 0 389 207 1 1 1 0 1 1 17558 9625 2729 9277 22467 25934 25934 1 IIEVVDAIMTTAQSHQR Unmodified 1910.9884 0.98839604 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 11.5 1.12 1 1 1 1 91.348 91.348 3 3.1647E-46 25990 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 171.15 153.45 123.45 113.86 142.82 82.671 74.255 121.54 116 116 139 81 74 116 4 4 4 3 2 3 90082 9626 2507 9278 22468;22469;22470;22471 25935;25936;25937;25938;25939;25940;25941 25939 7 IIEWFTAK Unmodified 1006.5488 0.54876789 3173 Q9EQG7 Enpp5 Ectonucleotide pyrophosphatase/phosphodiesterase family member 5 yes yes 0 0 0 0 11 0 1 83.543 83.543 2 0.0051775 26106 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.5 60.293 0 0 42 0 0 0 0 0 42 0 0 0 0 0 1 0 0 0 3955 9627 3173 9279 22472 25942 25942 1 IIFANVSVR Unmodified 1017.5971 0.59711507 703 D6RGM8;D3YWH4;D3Z6X7;Q9DBU0 Tm9sf1 Transmembrane 9 superfamily member 1 yes no 0 0 0 0 10 3 1 1 81.08 81.08 2 0.0028457 31360 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.195 9.098 159.97 194.46 371.14 254.1 364.86 183.52 150 186 365 259 366 176 1 1 2 2 2 1 324450 9628 703 9280 22473;22474 25943;25944 25944 2 IIFEDDR Unmodified 906.4447 0.44469675 567 B0R1E3;P70349 Hint1 Histidine triad nucleotide-binding protein 1 yes no 0 0 0 0 7 3.54 1 1 1 1 57.95 57.95 2 0.0022698 19148 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.63 75.787 219.31 410.62 580.95 562.12 550.51 537.55 206 408 583 551 561 519 1 3 4 4 3 4 155700 9629 567 9281 22475;22476;22477;22478 25945;25946;25947;25948;25949 25948 5 IIFLHGK Unmodified 826.50651 0.50650915 3103 Q9DAR7;Q3TBW9;D6RFQ0 Dcps m7GpppX diphosphatase yes no 0 0 0 0 6.5 5.5 1 1 57.746 57.746 3 0.0053281 13057 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.584 39.896 127.01 215.08 178.88 198.19 228.01 161.92 120 213 186 195 232 158 1 2 2 2 2 2 32197 9630 3103 9282 22479;22480 25950;25951 25951 2 IIFLMGGPGSGK Unmodified 1175.6373 0.63726532 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 1 0 2 81.115 81.115 2;3 0.00010387 28275 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.556 47.427 49.358 0 0 20.767 37.384 38.375 46 0 0 19 37 37 2 0 0 1 1 1 4936.3 9631 2792 9283 22481;22482 25952;25953 25952 2 IIFQVSSK Unmodified 920.53312 0.53311783 2634 Q8R0Y8 Slc25a42 Mitochondrial coenzyme A transporter SLC25A42 yes yes 0 0 0 0 12 0 1 65.912 65.912 2 0.019545 16280 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.516 45.704 39.295 26.374 45.937 46.124 75.285 0 37 28 46 46 74 0 1 1 1 1 1 0 2436.9 9632 2634 9284 22483 25954 25954 1 IIFSPVAPK Unmodified 970.58515 0.5851534 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 8 4.97 1 1 1 69.925 69.925 2 0.0011414 23829 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.57 35.3 117.44 0 318.74 191.06 166.72 504.79 111 0 303 190 167 478 1 0 2 1 2 3 65779 9633 2543 9285 22484;22485;22486 25955;25956;25957 25955 3 IIFVVGGPGSGK Unmodified 1129.6495 0.64954457 3306 Q9R0Y5;Z4YN97 Ak1 Adenylate kinase isoenzyme 1 yes no 0 0 0 0 6.5 5.52 4 1 2 1 73.073 73.073 2;3 2.162E-27 21138 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 178.94 118.5 691.17 330.92 619.85 426.34 1121.5 602.25 648 334 591 408 1114 582 10 9 8 8 12 5 219890 9634 3306 9286 22487;22488;22489;22490;22491;22492;22493;22494 25958;25959;25960;25961;25962;25963;25964;25965;25966;25967;25968;25969;25970;25971;25972 25966 15 IIGDTFVK Unmodified 891.50657 0.50656873 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 8 0 1 66.421 66.421 2 0.0037439 21632 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.62 32.676 0 0 115.12 111.82 140.26 0 0 0 111 111 139 0 0 0 1 1 1 0 7682 9635 1925 9287 22495 25973 25973 1 IIGFGSALLEEVDPNPANFVGAGIIHTK Unmodified 2878.5229 0.52289408 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 9.6 1.85 2 1 1 1 98.441 98.441 4;5 5.023E-27 35381 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.44 90.641 69.516 84.541 52.132 143.94 67.919 92.288 65 84 51 134 70 88 2 4 3 5 4 4 21569 9636 1401 9288 22496;22497;22498;22499;22500 25974;25975;25976;25977;25978;25979;25980 25975 7 IIGIDINK Unmodified 884.53312 0.53311783 1474 P28474;Q64437 Adh5;Adh7 Alcohol dehydrogenase class-3;Alcohol dehydrogenase class 4 mu/sigma chain yes no 0 0 0 0 9 0.816 1 1 1 68.969 68.969 2;3 0.015998 22864 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.281 10.715 148.08 147.58 193.51 188.83 98.045 263.7 139 148 194 185 102 250 2 2 2 3 1 3 11825 9637 1474 9289 22501;22502;22503 25981;25982;25983 25981 3 IIGLDQVAGMSETALPGAFK Unmodified 2017.0554 0.055412974 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 9 0 1 90.207 90.207 4 0.058553 31869 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 26.956 16.297 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 1218.5 9638 2696 9290 22504 25984 25984 1 IIGNTENLVR Unmodified 1127.6299 0.62987176 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 10 3 1 1 56.878 56.878 2;3 0.0067022 19535 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.042 39.9 0 154.13 200.14 36.064 186.27 192.96 0 148 195 37 186 186 0 2 2 1 2 2 17200 9639 2840 9291 22505;22506 25985;25986 25986 2 IIGSNVK Unmodified 729.43849 0.43848916 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 9.5 0.5 1 1 49.611 49.611 2 0.01429 12879 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.72 20.558 286.47 104.31 276.03 140.15 161.12 207.54 269 111 268 139 167 199 2 1 2 1 1 1 48144 9640 1994 9292 22507;22508 25987;25988 25987 2 IIGTQEQLNQR Unmodified 1298.6943 0.69426293 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 2.61 2 1 1 1 48.658 48.658 2;3 6.9722E-13 13891 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 145.99 84.309 167.96 222.33 152.94 271.45 192.23 155.28 158 222 158 260 194 148 4 5 3 5 3 3 38560 9641 2186 9293 22509;22510;22511;22512;22513 25989;25990;25991;25992;25993 25991 5 IIHEAGYSEEECK Unmodified 1563.6875 0.68752257 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 4 0.707 1 2 1 45.969 45.969 3;4 2.1698E-29 14408 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 179.67 149.18 148.46 109.95 38.704 35.49 96.061 0 139 112 37 37 93 0 2 2 1 2 1 0 26020 9642 622 9294 22514;22515;22516;22517 25994;25995;25996;25997;25998 25995 5 IIHEDGFSGEDVK Unmodified 1444.6834 0.68342347 1411 P18872;D3Z2M7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 4.5 0.957 1 2 2 1 54.194 54.194 3;4 7.0646E-41 18371 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 191.53 170.67 348.59 375.06 690.21 671.82 737.4 625.86 328 362 674 660 750 601 4 6 6 7 6 3 254240 9643 1411 9295 22518;22519;22520;22521;22522;22523 25999;26000;26001;26002;26003;26004;26005;26006 26001 8 IIHEDGYSEEECR Unmodified 1635.6835 0.68349983 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 3 0 1 41.27 41.27 3 3.9008E-28 12589 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 177.1 165.39 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 17766 9644 1330 9296 22524 26007 26007 1 IIHGSGYSDEDRK Unmodified 1475.7005 0.70047052 1492 P30677 Gna14 Guanine nucleotide-binding protein subunit alpha-14 yes yes 0 0 0 1 5 0 1 37.92 37.92 4 0.0016099 10099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.175 8.6068 49.128 45.631 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 0 1886.4 9645 1492 9297 22525 26008 26008 1 IIIDKEYYYTK Unmodified 1447.7599 0.75988288 739 O88545;D3Z0F5 Cops6 COP9 signalosome complex subunit 6 yes no 0 0 0 1 9 0 1 65.436 65.436 3 0.0021025 20504 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.241 47.05 0 155.09 142.42 188.8 261.23 212.14 0 148 148 185 265 206 0 1 1 1 1 1 10144 9646 739 9298 22526 26009 26009 1 IIIPEIQK Unmodified 952.59572 0.59571809 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 0 9 0 1 71.264 71.264 2 0.031863 23205 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.223 19.228 69.089 43.052 73.784 75.271 64.532 0 65 46 74 74 65 0 1 1 1 1 1 0 8230.1 9647 3186 9299 22527 26010 26010 1 IIIPQDVGLTILK Unmodified 1421.8858 0.8857521 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 10.6 1.36 1 2 1 1 88.624 88.624 2;3 2.7074E-07 28749 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.37 73.963 98.98 188.29 186.06 155.55 125.29 126.75 93 185 185 148 129 121 3 5 4 4 3 2 89126 9648 2585 9300 22528;22529;22530;22531;22532 26011;26012;26013;26014;26015;26016 26013 6 IIKEPVPDSGLLSLFQGQSPLTSC Unmodified 2585.3411 0.34108989 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 1 9.5 0.5 1 1 97.77 97.77 3;4 0.0073135 31898 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.405 19.791 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 6780.6 9649 1840 9301 22533;22534 26017;26018 26018 2 IIKPCNHVLSLSFPIR Unmodified 1893.0659 0.065858501 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 1 0 2 77.452 77.452 4 2.0713E-05 23575 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.45 80.876 141.44 164.99 188.97 195.43 168.31 258.78 133 167 190 192 173 249 2 4 3 4 2 5 24070 9650 1458 9302 22535;22536 26019;26020;26021;26022;26023 26019 5 IIKPCNHVLSLSFPIR Deamidation (N) 1894.0499 0.049874086 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 1 0 1 11 0 1 71.187 71.187 4 1.4746E-05 20585 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.69 67.216 0 118.1 0 0 112.48 105.52 0 111 0 0 111 102 0 1 0 0 1 1 18950 9651 1458 9302 22537 26024 26024 537 1 IILAAFR Unmodified 802.50651 0.50650915 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 13 0 1 71.286 71.286 2 0.044876 26613 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.906 48.596 178.12 0 179.8 0 0 157.77 167 0 167 0 0 148 1 0 1 0 0 1 22069 9652 65 9303 22538 26025 26025 1 IILDLISESPIK Unmodified 1339.7963 0.79626839 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BLP7 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 11 1.41 1 1 1 1 1 97.878 97.878 3 6.4222E-13 32054 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.42 99.037 165.47 200.89 236.42 193.15 145.25 251.48 157 194 222 181 149 241 4 3 4 3 2 5 122580 9653 613 9304 22539;22540;22541;22542;22543 26026;26027;26028;26029;26030;26031;26032;26033;26034 26028 9 IILEALR Unmodified 826.52764 0.52763852 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 11.5 1.5 1 1 69.734 69.734 2 0.0065262 20595 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.3 51.007 157.3 107.93 160.8 64.729 400.11 80.558 148 111 158 65 388 83 2 1 2 1 2 1 63005 9654 1882 9305 22544;22545 26035;26036 26035 2 IILLAEGR Unmodified 883.5491 0.54910224 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 11.5 1.5 1 1 66.657 66.657 2 0.0046104 19079 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.18 42.986 78.538 62.321 179.26 158.01 212.63 84.804 74 65 176 158 213 83 1 1 2 2 2 1 23083 9655 1594 9306 22546;22547 26037;26038 26037 2 IILLFDAHK Unmodified 1068.6332 0.63316622 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 8.33 5.25 1 1 1 74.657 74.657 3 0.00021261 27915 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.502 59.622 20.346 143.43 185.1 156.11 159.54 232.14 19 139 185 155 167 221 1 2 1 1 2 1 49824 9656 3271;3353 9307 22548;22549;22550 26039;26040;26041 26041 3 IILNTAVAEFFK Unmodified 1364.7704 0.77038799 288 A0A1L1SSE2;A0A1L1SQA7;A0A1L1SS47;A0A1L1SQF2;Q8BH15 Cnot10 CCR4-NOT transcription complex subunit 10 yes no 0 0 0 0 12 0 1 94.575 94.575 2 0.00068334 27148 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.417 52.673 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 523.78 9657 288 9308 22551 26042 26042 1 IILPEGAK Unmodified 839.51165 0.5116541 2775 Q91YQ5 Rpn1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 0 9 0 1 60.641 60.641 2 0.051499 18186 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.973 5.2563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9658 2775 9309 22552 26043 26043 1 IILQDEDVTTK Unmodified 1273.6765 0.67654718 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 6 0 1 63.104 63.104 3 0.0063075 21577 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.237 15.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9659 1802 9310 22553 26044 26044 1 IILSTLPNK Unmodified 997.61718 0.61718181 2223 Q6P5U7 Nwd2 NACHT and WD repeat domain-containing protein 2 yes yes 0 0 0 0 8 4.97 1 1 1 68.42 68.42 2;3 0.0035272 19233 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.516 20.957 0 0 0 24.654 34.895 77.888 0 0 0 23 37 74 0 0 0 1 2 2 3936.2 9660 2223 9311 22554;22555;22556 26045;26046;26047 26046 3 IILTAQPFR Unmodified 1057.6284 0.6284152 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 8 4.97 1 1 1 68.228 68.228 2 0.00089604 23196 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.95 58.426 345.91 377.37 169.66 238.6 35.711 536.24 324 366 167 222 37 504 3 3 2 2 1 3 76697 9661 2408 9312 22557;22558;22559 26048;26049;26050;26051 26048 4 IILTGQK Unmodified 771.48544 0.48543935 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 10 0 1 55.955 55.955 2 0.023693 14158 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.71 21.417 99.276 101.83 0 0 112.15 115.13 93 102 0 0 111 111 1 1 0 0 1 1 6003.1 9662 179 9313 22560 26052 26052 1 IILVIGGPGSGK Unmodified 1109.6808 0.6808447 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 0 6.5 5.5 2 2 73.92 73.92 2;3 1.853E-14 19130 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 136.63 81.068 48.999 57.96 197.53 39.373 198.55 105.25 46 56 186 37 195 102 1 1 3 1 4 2 35666 9663 2792 9314 22561;22562;22563;22564 26053;26054;26055;26056 26055 4 IIMLFTDGGEER Unmodified 1379.6755 0.67550132 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 9 0 1 81.711 81.711 3 0.0063605 28130 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.149 23.019 0 29.478 18.789 0 0 29.848 0 28 19 0 0 28 0 1 1 0 0 1 2154.8 9664 882 9315 22565 26057 26057 1 IINADSEDPK Unmodified 1100.535 0.53496832 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 4.5 0.5 1 1 50.783 50.783 3 2.7778E-05 16660 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.38 52.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2104.3 9665 1555 9316 22566;22567 26058;26059 26058 2 IINDDQSFYADVYLEDGLIK Unmodified 2330.1318 0.13180862 2212;1850 P97427;Q6P1J1;Q71H75 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 10.3 3.77 1 2 91.019 91.019 3;4 1.3101E-05 34576 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.081 40.688 48.959 65.9 36.458 67.296 151.8 27.971 46 65 37 65 149 28 2 2 1 2 3 1 12742 9666 1850;2212 9317 22568;22569;22570 26060;26061;26062 26060 3 IINDLLQSLR Unmodified 1183.6925 0.69247202 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 11 0 1 91.71 91.71 2 5.4205E-05 29395 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.61 39.565 0 0 144.94 122.52 0 0 0 0 139 120 0 0 0 0 1 1 0 0 15186 9667 1952 9318 22571 26063 26063 1 IINEGAAILR Unmodified 1068.6291 0.62914348 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 7 1 1 1 63.579 63.579 2 0.00072591 21744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.804 47.759 123.1 133.39 116.36 133.27 100.29 139.98 116 135 121 130 102 134 2 2 2 2 1 2 20046 9668 811 9319 22572;22573 26064;26065 26064 2 IINEPTAAAIAYGLDK Unmodified 1658.8879 0.88793694 1762;1419;1397;1394 P17156;P63017;Q504P4;P16627;P20029 Hspa2;Hspa8;Hspa1l;Hspa5 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein no no 0 0 0 0 8.33 2.29 1 2 1 1 1 79.549 79.549 2;3 4.2472E-17 28563 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.98 100.85 720.96 521.3 406 570.77 912.29 723.7 676 537 407 547 921 698 8 7 6 5 9 8 370090 9669 1397;1762;1394;1419 9320 22574;22575;22576;22577;22578;22579 26066;26067;26068;26069;26070;26071;26072;26073;26074;26075 26069 10 IINEPTAAAIAYGLDKK Unmodified 1786.9829 0.98289996 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 1 9.56 2.22 2 2 1 1 1 2 73.726 73.726 3;4 1.1328E-33 25031 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 149.34 121.49 1169.8 1288.2 808.46 1504.8 1594.4 1656 1098 1296 800 1431 1630 1589 9 11 6 10 9 11 661830 9670 1397;1762 9321 22580;22581;22582;22583;22584;22585;22586;22587;22588 26076;26077;26078;26079;26080;26081;26082;26083;26084;26085;26086;26087 26079 12 IINEPTAAAIAYGLDKR Unmodified 1814.989 0.98904797 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 9.25 2.28 1 1 1 1 71.456 71.456 3 5.7295E-08 23982 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.43 86.902 127.84 186.62 134.25 106.07 249.73 289.22 120 185 130 102 250 278 1 2 2 2 3 4 50494 9671 1419 9322 22589;22590;22591;22592 26088;26089;26090;26091 26089 4 IINEPTAAAIAYGLDR Unmodified 1686.8941 0.89408495 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 7 1 1 1 76.271 76.271 2;3 4.5911E-05 27780 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.589 31.386 20.215 38.922 55.63 56.682 64.378 29.347 19 37 56 56 65 28 1 1 2 2 2 1 5697.4 9672 1407 9323 22593;22594 26092;26093 26092 2 IINEVKPTEIYNLGAQSHVK Unmodified 2252.2165 0.21648172 2578 Q8K0C9 Gmds GDP-mannose 4,6 dehydratase yes yes 0 0 0 1 8 0 1 65.435 65.435 4 0.013954 21116 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.805 21.079 59.634 0 76.367 76.331 0 59.696 56 0 74 74 0 56 1 0 1 1 0 1 3287.4 9673 2578 9324 22595 26094 26094 1 IINLLGFPGDR Unmodified 1213.6819 0.68190733 824 E9PV21;G3X8X1;Q8VE09 Ttc39c Tetratricopeptide repeat protein 39C yes no 0 0 0 0 11 0 1 84.761 84.761 2 0.044639 26595 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.791 21.873 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 4404.6 9674 824 9325 22596 26095 26095 1 IIPADLEAK Unmodified 968.55425 0.5542472 1578 P48318 Gad1 Glutamate decarboxylase 1 yes yes 0 0 0 0 6.5 0.5 1 1 66.391 66.391 2 0.0017374 22227 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.582 45.416 186.56 160.96 248.14 264.06 225.58 144.62 176 167 250 259 232 139 2 2 2 2 2 1 18781 9675 1578 9326 22597;22598 26096;26097 26097 2 IIPAIATTTAAVVGLVCLELYK Unmodified 2315.3174 0.31744132 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 13 0 1 127.3 127.3 3 0.036921 45785 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 26.719 17.189 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9676 1876 9327 22599 26098 26098 1 IIPAVASTNAVIAAVCATEVFK Unmodified 2244.2188 0.21878991 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 11.8 0.433 1 3 101.91 101.91 3;4 3.5906E-26 28822 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.28 84.34 12.781 8.5678 32.782 31.486 23.58 55.033 12 9 32 31 24 53 1 1 2 3 2 4 13197 9677 1929 9328 22600;22601;22602;22603 26099;26100;26101;26102;26103 26103 5 IIPGADADVVVWDPEATK Unmodified 1894.9676 0.96764382 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 5.5 0.5 1 1 84.032 84.032 3;4 0.00035522 31877 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.831 40.238 14.904 0 29.615 13.591 57.284 19.455 14 0 28 14 56 19 1 0 2 1 2 1 9169 9678 3172 9329 22604;22605 26104;26105 26104 2 IIPGFMCQGGDFTR Unmodified 1597.7381 0.73811836 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 10.6 1.4 2 2 1 1 1 76.665 76.665 2;3 4.0303E-31 23407 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 167.11 128.09 425.29 320.5 316.33 357.96 345.49 415.48 399 334 315 343 352 399 6 7 5 5 5 7 619060 9679 1404 9330 22606;22607;22608;22609;22610;22611;22612 26106;26107;26108;26109;26110;26111;26112;26113;26114;26115 26110 10 IIPGFMCQGGDFTR Oxidation (M) 1613.733 0.73303298 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 1 0 10 0 1 76.653 76.653 3 0.00029939 23480 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.101 73.499 118.71 0 65.917 85.635 61.407 77.132 111 0 65 83 65 74 1 0 1 1 1 1 2999.1 9680 1404 9330 22613 26116 26116 96 1 IIPGGAAAEDGR Unmodified 1125.5778 0.57783619 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2 Dlg2 Disks large homolog 2 yes no 0 0 0 0 8.33 3.4 1 1 1 48.583 48.583 2 4.5942E-09 15260 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.21 58.109 48.951 0 68.463 36.361 0 69.29 46 0 65 37 0 65 1 0 1 1 0 1 5685 9681 690 9331 22614;22615;22616 26117;26118;26119 26119 3 IIPGGAAAQDGR Unmodified 1124.5938 0.5938206 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;E9PXG2;J3QMR8;F6TPQ6;A0A338P746;J3KMS4 Dlg4 Disks large homolog 4 yes no 0 0 0 0 8.67 3.09 1 1 1 46.465 46.465 2 2.898E-32 12959 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 182.16 110.16 201.02 217.74 293.88 154.91 89.696 293.79 190 222 291 153 93 278 3 3 3 2 1 3 37763 9682 407 9332 22617;22618;22619 26120;26121;26122 26121 3 IIPGGVAER Unmodified 910.52362 0.52361577 2571 Q8JZS0;Q3TUM0 Lin7a Protein lin-7 homolog A yes no 0 0 0 0 7 0 1 51.279 51.279 2 0.0041473 15132 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.754 21.325 127.75 68.254 111.72 81.845 117.81 114.96 120 74 111 83 120 111 1 1 1 1 1 1 11836 9683 2571 9333 22620 26123 26123 1 IIPLVVK Unmodified 780.54731 0.54731133 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6.25 5.26 2 1 1 73.9 73.9 2;3 0.0060976 21693 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 140.79 82.129 600.06 425.13 690.53 795.2 46.803 652.39 564 442 696 766 46 612 3 1 3 4 1 2 151780 9684 2264 9334 22621;22622;22623;22624 26124;26125;26126;26127 26126 4 IIPLYSTLPPQQQQR Unmodified 1780.9836 0.98356866 1185 O35286;A0A0G2JG10;Q497W9 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 11 0 1 70.896 70.896 3 3.4356E-05 20630 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.933 53.356 60.088 0 0 61.208 0 0 56 0 0 56 0 0 1 0 0 1 0 0 6129.5 9685 1185 9335 22625 26128 26128 1 IIPPGSGIIHQVNLEYLAR Unmodified 2089.1684 0.16840932 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 9 0 1 75.708 75.708 3 5.2435E-05 25335 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.278 38.188 0 39.368 0 0 37.714 28.772 0 37 0 0 37 28 0 1 0 0 1 1 4500.6 9686 1472 9336 22626 26129 26129 1 IIPSPGTHPLLVLVNPK Unmodified 1794.0767 0.076740764 2498 Q91WG7;Q8C413 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 0 6.25 5.26 2 1 1 75.916 75.916 3;4 5.4949E-07 22458 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.337 64.306 268.24 184.07 163.36 293.23 105.52 412.73 251 186 158 279 111 390 5 4 2 4 1 6 41401 9687 2498 9337 22627;22628;22629;22630 26130;26131;26132;26133;26134;26135 26133 6 IIPSTPFPQEGQALTLTCESK Unmodified 2316.1671 0.16714827 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 8 0.816 1 1 1 79.805 79.805 3 5.6026E-11 27914 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.326 70.838 118.21 80.982 81.662 188.13 24.471 118.69 111 83 83 177 28 112 3 2 2 3 1 3 27164 9688 1072 9338 22631;22632;22633 26136;26137;26138 26137 3 IIPYFEALK Unmodified 1092.6219 0.62193284 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 10.5 0.5 1 1 83.774 83.774 2 0.0029773 26618 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.06 53.45 30.044 0 0 0 0 49.036 28 0 0 0 0 46 1 0 0 0 0 1 3243.2 9689 2773 9339 22634;22635 26139;26140 26139 2 IIQFASGK Unmodified 862.49125 0.49125301 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 0 11 0.816 1 1 1 62.695 62.695 2 0.0028793 15237 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.84 58.317 88.072 71.031 229.5 134.71 88.584 239.45 83 74 222 130 88 227 1 1 2 1 1 2 19712 9690 441 9340 22636;22637;22638 26141;26142;26143 26143 3 IIQFNPGPDK Unmodified 1127.5975 0.597509 1285 O88958;D3Z0R5 Gnpda1 Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 0 9 0 1 64.429 64.429 2 0.0075621 20014 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.1 38.166 0 0 36.967 68.842 0 49.036 0 0 37 65 0 46 0 0 1 1 0 1 2637.4 9691 1285 9341 22639 26144 26144 1 IIQHCSNYSTQELLR Unmodified 1860.9152 0.9152311 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 7 0 1 52.187 52.187 3 6.9211E-06 15533 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.17 93.901 79.006 0 66.505 76.918 0 49.036 74 0 65 74 0 46 1 0 1 1 0 1 7034.8 9692 815;2590 9342 22640 26145 26145 1 IIQLIEGK Unmodified 912.56442 0.56441796 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 10.4 1.5 2 1 1 1 76.891 76.891 2;3 0.0089371 23552 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.54 47.385 335.71 118.09 267.14 291.37 340.5 278.87 314 112 260 287 343 269 3 2 3 4 3 3 58947 9693 255;3362 9343 22641;22642;22643;22644;22645 26146;26147;26148;26149;26150 26148 5 IIQLLDDYPK Unmodified 1216.6703 0.67033959 1381 P14869;D3YVM5 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 9.4 1.85 2 2 1 81.929 81.929 2;3 1.1449E-05 29086 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.42 66.137 59.9 183.18 123.96 162.86 67.99 78.884 56 176 121 149 65 74 2 4 2 3 1 2 48762 9694 1381 9344 22646;22647;22648;22649;22650 26151;26152;26153;26154;26155 26152 5 IIQTPGLWESENQNK Unmodified 1755.8792 0.87916317 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 7 0 1 69.963 69.963 3 0.0037136 23964 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.548 35.934 59.91 94.912 0 69.864 110.91 57.904 56 93 0 65 111 56 1 2 0 1 2 1 4751.3 9695 1518 9345 22651 26156;26157 26157 2 IISAASEGGANVFTVSYFK Unmodified 1959.9942 0.99419293 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9 0 1 83.964 83.964 3 0.00036547 29081 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.786 32.953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9696 2803 9346 22652 26158 26158 1 IISAHGCK Unmodified 884.45382 0.45382165 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 36.967 36.967 3 0.00050115 5610 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 127.56 78.206 2072.8 1771.1 2730.7 616.99 2209.6 2381.9 1952 1826 2657 607 2192 2282 5 5 7 4 4 5 653760 9697 106 9347 22653;22654;22655;22656;22657;22658 26159;26160;26161;26162;26163;26164;26165 26164 7 IISANGCK Unmodified 861.43784 0.43783723 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 9 0 1 45.995 45.995 2 0.012147 11300 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.6 38.622 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9698 2699 9348 22659 26166 26166 1 IISGQFLSDK Unmodified 1106.5972 0.59717465 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8.5 0.5 1 1 68.827 68.827 2 6.7971E-05 22795 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.62 43.96 59.264 113.17 119.76 67.224 62.254 155.99 56 112 120 65 65 148 1 2 2 1 1 2 10562 9699 3373 9349 22660;22661 26167;26168 26167 2 IISGQFLSDKK Unmodified 1234.6921 0.69213767 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 1 10 0 1 62.012 62.012 4 0.026417 16973 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.041 22.983 87.946 140.83 67.752 76.844 0 0 83 139 74 74 0 0 1 1 1 1 0 0 3492.9 9700 3373 9350 22662 26169 26169 1 IISGQNFPKPK Unmodified 1227.6976 0.69755739 2005;2608 Q3USB7;Q8K394 Plcl1;Plcl2 Inactive phospholipase C-like protein 1;Inactive phospholipase C-like protein 2 no no 0 0 0 1 10.5 0.5 1 1 55.288 55.288 3 0.0020296 13561 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.34 43.037 157.64 115.41 326.13 253.81 116.49 306.88 148 120 319 252 120 291 1 1 2 2 1 2 35383 9701 2005;2608 9351 22663;22664 26170;26171 26171 2 IISIFSGTEK Unmodified 1093.6019 0.60192568 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 0 11 0 1 75.23 75.23 3 0.0010852 22251 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.197 43.066 0 0 49.772 0 58.576 0 0 0 46 0 56 0 0 0 1 0 1 0 8369.3 9702 2556 9352 22665 26172 26172 1 IISIGGAK Unmodified 757.46979 0.46978929 2830 Q99JP6;Q501M9 Homer3 Homer protein homolog 3 yes no 0 0 0 0 10.5 0.5 1 1 58.725 58.725 2 0.0062124 15031 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.86 60.504 163.04 92.469 111.01 71.77 210.09 0 153 93 111 74 204 0 2 1 1 1 2 0 22187 9703 2830 9353 22666;22667 26173;26174 26174 2 IISLETYNLFR Unmodified 1367.7449 0.74490152 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 84.986 84.986 2 0.00060642 27105 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.096 48.014 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 4796.7 9704 3266 9354 22668 26175 26175 1 IISNLFLGR Unmodified 1031.6128 0.61276513 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9;E9Q405;A0A1C7ZN10;E9QA74 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 6.5 5.5 1 1 78.64 78.64 2 0.035989 21180 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.916 30.809 0 34.048 59.386 27.065 70.376 101.39 0 32 56 28 69 97 0 1 1 1 1 2 15195 9705 620 9355 22669;22670 26176;26177 26177 2 IISSHGCK Unmodified 900.44874 0.44873627 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 10 1.41 1 1 1 1 1 35.368 35.368 3 0.002257 6084 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.162 61.669 438.88 347.01 570.73 499.04 396.95 701.83 412 352 567 496 402 669 5 4 6 6 2 6 117510 9706 2253 9356 22671;22672;22673;22674;22675 26178;26179;26180;26181;26182;26183;26184 26183 7 IISSIEQK Unmodified 916.52295 0.52294707 1715 P62259;D6REF3;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 8.86 2.23 1 1 2 1 1 1 58.896 58.896 2;3 2.1236E-06 20311 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.53 89.222 1348.6 1140 1270 1085.2 1700.1 1349.5 1269 1163 1281 1081 1712 1304 8 7 6 6 7 6 359940 9707 1715 9357 22676;22677;22678;22679;22680;22681;22682 26185;26186;26187;26188;26189;26190;26191;26192;26193 26192 9 IISSIEQKEENK Unmodified 1416.746 0.74602373 1715 P62259;D6REF3;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 1 7 0.816 1 1 1 59.655 59.655 3 0.00011124 19065 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.189 61.859 385.74 363.31 324.65 267.53 379.42 442.22 363 371 333 269 389 425 3 3 3 3 3 3 43619 9708 1715 9358 22683;22684;22685 26194;26195;26196 26195 3 IISVDGAK Unmodified 801.45962 0.45961853 3262 Q9QWW1 Homer2 Homer protein homolog 2 yes yes 0 0 0 0 8 0 1 55.467 55.467 2 0.05506 16434 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.582 2.8952 88.585 0 79.621 0 122.93 75.376 83 0 74 0 120 74 1 0 1 0 1 1 3970.6 9709 3262 9359 22686 26197 26197 1 IISVNSVDLR Unmodified 1114.6346 0.63462279 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0;F6UDT8;S4R2T8 Dlg1 Disks large homolog 1 yes no 0 0 0 0 8 0 1 64.204 64.204 2 6.7062E-05 20743 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.68 38.702 99.155 0 106.61 73.001 81.165 66.974 93 0 102 74 83 65 1 0 1 1 1 1 28975 9710 767 9360 22687 26198 26198 1 IISWQPPEVIQQYLSGGR Unmodified 2070.0898 0.089824645 2824 Q99J08 Sec14l2 SEC14-like protein 2 yes yes 0 0 0 0 11 0.816 1 1 1 94.567 94.567 3 1.9559E-07 30720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.796 81.728 0 54.217 103.43 38.729 0 24.518 0 52 103 38 0 23 0 3 4 2 0 1 17310 9711 2824 9361 22688;22689;22690 26199;26200;26201;26202;26203;26204 26203 6 IITAESGKPLK Unmodified 1155.6863 0.68632401 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 1 10.7 1.7 1 1 1 52.792 52.792 3 0.00050062 12869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.313 63.105 662.18 572.27 393.72 597.99 489.54 677.86 622 586 404 577 497 649 3 3 2 3 2 3 79459 9712 2469 9362 22691;22692;22693 26205;26206;26207 26206 3 IITEGASILR Unmodified 1071.6288 0.62880913 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 8.5 2.22 1 1 2 1 1 65.066 65.066 2;3 3.3531E-09 21004 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.78 84.955 602.03 870.14 676.89 982.18 762.24 1012.2 567 863 679 948 787 966 4 5 4 6 6 5 357710 9713 1786 9363 22694;22695;22696;22697;22698;22699 26208;26209;26210;26211;26212;26213;26214 26212 7 IITEGFEAAK Unmodified 1077.5706 0.57062555 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 10.2 2.77 1 1 2 64.652 64.652 2;3 2.1581E-07 20904 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.45 97.363 225.83 182.34 155.46 240.35 322.62 232.29 212 185 157 232 325 222 3 3 2 3 3 3 33917 9714 1826 9364 22700;22701;22702;22703 26215;26216;26217;26218 26216 4 IITGGAAAQDGR Unmodified 1128.5887 0.58873523 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0;S4R2T8 Dlg1 Disks large homolog 1 yes no 0 0 0 0 7 0 1 42.232 42.232 2 5.9249E-05 10885 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.113 57.875 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 5399.4 9715 767 9365 22704 26219 26219 1 IITITGTQDQIQNAQYLLQNSVK Deamidation (N) 2589.365 0.36499645 613 B2M1R6;P61979;H3BLL4 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 1 0 0 8 0 1 83.857 83.857 3 5.8415E-06 29884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.02 42.091 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2309.2 9716 613 9366 22705 26220 26220 176 1 IITITGTQDQIQNAQYLLQNSVK Unmodified 2588.381 0.38098087 613 B2M1R6;P61979;H3BLL4 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 10 0.816 1 1 1 87.422 87.422 3 7.8515E-35 27796 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 134.87 120.71 49.848 5.5177 25 0 0 0 49 6 25 0 0 0 2 1 1 0 0 0 26203 9717 613 9366 22706;22707;22708 26221;26222;26223 26223 3 IITLAGPTNAIFK Unmodified 1357.7969 0.79693709 394 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VHI3 Pcbp2 Poly(rC)-binding protein 2 yes no 0 0 0 0 7.6 5.43 2 1 1 1 81.456 81.456 2;3 1.5015E-15 31413 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.08 67.325 583.55 52.938 153.23 84.981 120.71 86.667 569 56 148 83 121 84 5 3 4 2 3 3 145780 9718 394 9367 22709;22710;22711;22712;22713 26224;26225;26226;26227;26228;26229;26230 26230 7 IITLAGPTNAIFK Deamidation (N) 1358.781 0.78095267 394 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VHI3 Pcbp2 Poly(rC)-binding protein 2 yes no 0 1 0 0 9 0 1 82.904 82.904 3 0.0077324 28711 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.576 23.103 39.468 46.283 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 0 6430.5 9719 394 9367 22714 26231 26231 103 1 IITLQEEMER Unmodified 1260.6384 0.63838754 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 5 0 1 65.057 65.057 2 0.0024143 22993 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.014 53.599 39.366 66.506 0 39.963 25.427 58.97 37 65 0 37 28 56 1 1 0 1 1 1 4072.9 9720 3056 9368 22715 26232 26232 1 IITLTGPTNAIFK Unmodified 1387.8075 0.80750177 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 8.71 4.92 2 2 2 1 81.357 81.357 2;3 5.2189E-16 22244 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 140.14 104.18 148.45 322.1 266.92 75.203 55.501 334.77 139 316 260 74 56 315 2 6 5 2 2 4 236680 9721 1668 9369 22716;22717;22718;22719;22720;22721;22722 26233;26234;26235;26236;26237;26238;26239;26240 26239 8 IITLTGPTNAIFK Deamidation (N) 1388.7915 0.79151736 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 1 0 0 10 0 1 82.797 82.797 3 0.0077742 26286 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.495 31.266 9.4953 0 27.169 69.112 16.699 0 9 0 28 65 19 0 1 0 1 1 1 0 3498.3 9722 1668 9369 22723 26241 26241 640 1 IITNGELAPQETTITEIK Deamidation (N) 1971.0412 0.041202698 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 1 0 0 9 4 1 1 75.739 75.739 3 2.7351E-06 28743 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.334 49.187 0 20.216 45.364 129.03 27.604 78.096 0 19 46 121 28 74 0 1 1 2 1 2 10133 9723 2792 9370 22724;22725 26242;26243 26243 996 2 IITNGELAPQETTITEIK Unmodified 1970.0572 0.057187113 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 0 6 0 1 72.834 72.834 3 0.04775 26149 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 29.636 12.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9724 2792 9370 22726 26244 26244 1 IITQMLQYHNK Unmodified 1387.7282 0.7282056 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A087WQE1;A0A286YCF5;J3QP84;A0A286YDB5;A0A1D5RMA3 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 12 0 1 63.553 63.553 3 6.094E-14 15469 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 150.46 114.15 81.734 41.528 113.95 0 67.99 0 77 46 108 0 65 0 1 1 1 0 1 0 10947 9725 360 9371 22727 26245 26245 1 IITSGHQR Unmodified 910.49846 0.49846366 2641 Q8R1F6 Hid1 Protein HID1 yes yes 0 0 0 0 8 0 1 27.215 27.215 3 0.004471 4196 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.072 45.768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9726 2641 9372 22728 26246 26246 1 IITTLAMK Unmodified 889.53067 0.53067499 2289 Q7TPM6 Fsd1 Fibronectin type III and SPRY domain-containing protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 69.446 69.446 2 0.0056969 17566 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.17 62.132 172.49 51.49 0 0 85.867 227.81 161 53 0 0 86 216 2 1 0 0 1 2 16057 9727 2289 9373 22729;22730 26247;26248 26248 2 IIVDELK Unmodified 828.49567 0.49566969 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 13 0 1 66.038 66.038 2 0.038991 24112 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.469 22.365 0 0 155.58 102.21 0 118.33 0 0 148 102 0 111 0 0 1 1 0 1 4792.1 9728 1792 9374 22731 26249 26249 1 IIVDELKQEVISTSSK Unmodified 1787.988 0.98804492 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 1 7.8 0.748 2 2 1 81.678 81.678 3;4 4.098E-25 27976 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 142.91 122.17 109.06 202.89 125.87 278.79 119.93 186.02 102 195 130 264 121 176 2 3 3 5 2 3 39853 9729 1792 9375 22732;22733;22734;22735;22736 26250;26251;26252;26253;26254 26254 5 IIVFSACR Unmodified 964.51642 0.51642191 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 6.5 5.5 1 1 63.265 63.265 2 0.0016154 15290 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.09 83.036 197.14 117.53 130.42 180.87 198.26 167.94 185 125 134 176 203 162 1 1 1 2 2 1 35090 9730 2047 9376 22737;22738 26255;26256 26256 2 IIVIGDSNVGK Unmodified 1113.6394 0.63937381 1216 O35963;A0A0A6YY00;P97950 Rab33b;Rab33a Ras-related protein Rab-33B;Ras-related protein Rab-33A yes no 0 0 0 0 9 0 1 65.77 65.77 2 0.0011991 20657 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.841 20.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9731 1216 9377 22739 26257 26257 1 IIVLGLLPR Unmodified 992.67464 0.67463711 313 A0A1L1SVK0;Q61206;A0A1L1SQV7 Pafah1b2 Platelet-activating factor acetylhydrolase IB subunit beta yes no 0 0 0 0 13 0 1 84.974 84.974 2 0.0023019 33210 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.62 61.543 49.016 0 57.403 66.048 83.784 0 46 0 56 65 83 0 1 0 1 1 1 0 17311 9732 313 9378 22740 26258 26258 1 IIVMSFPVDSVDIGFR Unmodified 1793.9386 0.9385923 2306 Q80TZ3;B1B0B8;B1B0B7 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 10 0.816 1 1 1 95.634 95.634 3 0.00072769 34197 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.372 43.16 70.443 37.121 39.225 0 29.288 50.102 66 37 38 0 28 47 3 2 2 0 1 1 9361.6 9733 2306 9379 22741;22742;22743 26259;26260;26261;26262 26259 4 IIWELIK Unmodified 913.56369 0.56368968 1278 O88844;A0A087WPT4;A0A087WRS9;D3YVY3;A0A087WRM4 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 10.5 0.5 1 1 88.066 88.066 2 0.021458 28389 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 32.131 0 0 60.592 54.736 101.67 73.092 0 0 56 51 102 70 0 0 1 1 2 1 36016 9734 1278 9380 22744;22745 26263;26264;26265 26263 3 IIWPGGETEKPR Unmodified 1381.7354 0.73539946 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 1 9 0 1 57.182 57.182 3 0.0019818 16528 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.908 20.824 0 0 89.806 0 65.675 67.416 0 0 83 0 65 65 0 0 1 0 1 1 11781 9735 468 9381 22746 26266 26266 1 IIYGGSVTGATCK Unmodified 1325.6649 0.66493664 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 9.44 3.3 1 1 1 2 2 1 1 57.441 57.441 2;3 5.9815E-33 16662 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 184.24 121.42 694.17 912.26 1098.7 631.33 875.23 1013.2 654 913 1086 631 873 969 8 10 9 7 6 9 510220 9736 1405 9382 22747;22748;22749;22750;22751;22752;22753;22754;22755 26267;26268;26269;26270;26271;26272;26273;26274;26275;26276;26277 26269 11 IIYIVHDEVK Unmodified 1227.6863 0.68632401 1253 O70435;E0CX62 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 0 8 0 1 63.204 63.204 3 0.0010781 20082 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.294 42.348 99.276 101.83 0 69.098 103.52 0 93 102 0 65 102 0 1 1 0 1 1 0 8293.9 9737 1253 9383 22756 26278 26278 1 IIYIVHDEVKDK Unmodified 1470.8082 0.80823006 1253 O70435;E0CX62 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 1 8 0 1 63.158 63.158 4 0.00033162 20048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.958 49.477 0 138.32 0 0 0 157.77 0 130 0 0 0 148 0 1 0 0 0 1 8020.6 9738 1253 9384 22757 26279 26279 1 IIYQAASPDEGALVR Unmodified 1601.8413 0.8413211 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 6 0 1 64.026 64.026 2 0.00019774 21929 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.047 58.192 9.4947 8.6015 19.994 0 0 29.848 9 9 19 0 0 28 1 1 1 0 0 1 3543.8 9739 121 9385 22758 26280 26280 1 IKADYAQLLEDMQNAFR Unmodified 2024.999 0.99896073 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 9.67 0.471 1 2 94.304 94.304 3;4 1.3455E-05 30661 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.767 72.205 20.387 0 43.759 37.833 42.145 63.556 19 0 42 37 42 60 1 0 1 1 2 2 8096.9 9740 1596 9386 22759;22760;22761 26281;26282;26283;26284 26282 4 IKAPGFAHLAGLDK Unmodified 1436.814 0.81398414 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 1 10.5 0.5 1 1 62.528 62.528 4 0.00011099 17443 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.887 54.309 493.17 177.57 279.92 374.48 471.83 532.33 462 185 275 366 485 512 2 1 1 2 2 2 64814 9741 2754 9387 22762;22763 26285;26286 26285 2 IKDLSTIEPLK Unmodified 1255.7388 0.73875351 720 D3YYE1;D3Z7M9;O35381;F6UFG6 Anp32a Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 1 9 0.816 1 1 1 66.071 66.071 3 0.0012412 20704 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.85 50.788 447.57 318.29 429.48 334.83 485.11 503.17 421 326 426 336 495 485 3 2 2 2 3 3 36866 9742 720 9388 22764;22765;22766 26287;26288;26289 26288 3 IKDLSTVEALQNLK Unmodified 1570.893 0.89302232 868 E9Q5H2;E9PZF5;P97822 Anp32e Acidic leucine-rich nuclear phosphoprotein 32 family member E yes no 0 0 0 1 9 0 1 72.554 72.554 3 9.7537E-07 23855 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.74 80.706 59.684 0 67.97 46.227 0 0 56 0 65 46 0 0 1 0 1 1 0 0 6504.3 9743 868 9389 22767 26290 26290 1 IKEEDNQLIVK Unmodified 1327.7347 0.73473076 1538 P40237 Cd82 CD82 antigen yes yes 0 0 0 1 6 0 1 55.766 55.766 3 0.030765 18160 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.207 22.535 68.808 62.777 104.29 44.062 0 88.478 65 65 102 46 0 83 1 1 1 1 0 1 7069.7 9744 1538 9390 22768 26291 26291 1 IKEIAVTVK Unmodified 999.63283 0.63283187 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 1 9 0 1 58.341 58.341 3 0.031583 17081 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.718 13.557 0 0 180.69 0 138.28 207.12 0 0 167 0 139 198 0 0 1 0 1 1 9412.1 9745 1822 9391 22769 26292 26292 1 IKELTSICSPIISK Unmodified 1587.8906 0.89057948 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 10 0 1 70.115 70.115 4 0.00013981 20599 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.692 38.958 0 0 116.81 73.92 0 0 0 0 111 74 0 0 0 0 1 1 0 0 9251.3 9746 1957 9392 22770 26293 26293 1 IKESLPIELDQLSGR Unmodified 1696.9359 0.93594977 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 9.25 2.28 1 1 1 1 71.122 71.122 3 0.00023491 24713 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.873 70.445 386.31 365.02 219.92 484.95 425.46 242.3 362 371 222 463 436 232 3 4 2 4 4 2 45390 9747 2028 9393 22771;22772;22773;22774 26294;26295;26296;26297 26294 4 IKETYGDTEAICR Unmodified 1554.7348 0.73480712 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 1 7 0 1 48.686 48.686 3 0.0092295 13859 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.101 32.523 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9748 1042 9394 22775 26298 26298 1 IKGEHPGLSIGDVAK Unmodified 1519.8358 0.83584179 116 A0A0J9YUD8;A0A0J9YUZ4;P63158 Hmgb1 High mobility group protein B1 yes no 0 0 0 1 8.5 0.5 1 1 54.054 54.054 4 2.4313E-05 15996 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.222 46.672 468.68 298.17 505.62 619.52 791.55 488.81 441 309 505 608 800 475 2 1 2 3 3 2 28168 9749 116 9395 22776;22777 26299;26300;26301 26299 3 IKIEEEYAK Unmodified 1121.5968 0.5968403 587 B1ATI9;Q3U432;Q60780 Gas7 Growth arrest-specific protein 7 yes no 0 0 0 1 6 0 1 54.124 54.124 3 0.01459 17290 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.815 34.48 78.459 41.592 123.3 81.985 73.638 0 74 46 120 83 74 0 1 1 1 1 1 0 6651.7 9750 587 9396 22778 26302 26302 1 IKIIAPPER Unmodified 1035.6441 0.64406526 1673;1781;1791;2366 P60710;E9Q1F2;P63260;B1ATY1;P68033;P68134;P62737;P63268;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 1 10 0 1 51.843 51.843 3 0.0076318 12427 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.434 57.403 295.24 340.4 404.86 305.29 326.04 392.58 279 345 407 307 338 377 1 1 1 1 1 1 44181 9751 1673;1781;1791;2366 9397 22779 26303 26303 1 IKNEVDSTLTFR Unmodified 1421.7514 0.75144346 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 1 8 0 1 60.783 60.783 3 0.0021248 18956 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.16 48.741 0 126.05 97.738 113.66 97.503 115.54 0 120 102 111 102 111 0 1 1 1 1 1 17964 9752 2918 9398 22780 26304 26304 1 IKPTALIGVAAIGGAFTEQILK Unmodified 2210.3038 0.30384017 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 1 12.3 0.471 2 1 99.924 99.924 4 1.0177E-11 28338 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.184 50.59 143.75 85.114 166.78 133.46 206.53 135.89 135 87 162 131 206 131 6 6 5 5 6 6 11461 9753 1317 9399 22781;22782;22783 26305;26306;26307;26308;26309;26310;26311;26312;26313 26305 9 IKPTTLQVENISIGGVLVPLELK Unmodified 2460.4567 0.45671199 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 1 10.2 0.687 1 3 2 90.65 90.65 3;4;5 8.2556E-16 29614 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.352 77.277 66.958 73.314 108.86 54.97 189.16 59.233 63 73 103 53 184 56 2 3 3 3 5 2 49519 9754 2050 9400 22784;22785;22786;22787;22788;22789 26314;26315;26316;26317;26318;26319;26320;26321 26316 8 IKPVFIEDANFGR Unmodified 1504.8038 0.80381338 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 1 9 0 1 67.465 67.465 3 0.00026858 21467 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.069 48.384 168.42 0 186.72 209.89 278.01 0 158 0 182 207 275 0 1 0 1 1 1 0 21180 9755 882 9401 22790 26322 26322 1 IKPVLMMNK Unmodified 1072.6137 0.61369311 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 1 1 0 1 64.18 64.18 3 0.0009857 21536 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.25 62.529 389.08 156.04 298.42 333.59 262.8 368.8 365 176 300 326 278 353 1 1 1 1 1 1 28994 9756 1652 9402 22791 26323 26323 1 IKPVVDSLWALEEVK Unmodified 1724.9713 0.97127264 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 1 9.75 1.92 1 2 1 91.831 91.831 3;4 2.1386E-05 33008 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.754 50.725 79.2 66.914 38.69 61.413 47.203 29.848 74 66 38 57 46 28 2 4 2 3 1 2 8403 9757 2300 9403 22792;22793;22794;22795 26324;26325;26326;26327;26328;26329 26325 6 IKQDSNLIGPEGGVLSSTVVSQVQAVFPEGALTK Unmodified 3467.8512 0.85116409 3449;3451;3452 S4R2F3;Q8C8R3;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 1 9 0 1 91.737 91.737 4 0.0017471 32694 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.358 22.965 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1615.6 9758 3449;3451;3452 9404 22796 26330 26330 1 IKTDGAAPNVAPSDVGGGGGTNR Unmodified 2110.0403 0.04030827 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 8.5 2.69 1 1 1 1 46.762 46.762 3 1.201E-11 13105 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.524 65.039 59.425 18.068 96.174 75.189 75.051 107.13 56 19 92 75 75 102 2 1 2 3 2 3 32764 9759 1362 9405 22797;22798;22799;22800 26331;26332;26333;26334 26332 4 IKVDNHLFNK Unmodified 1226.6772 0.6771563 2334;1244 O70172;Q80XI4 Pip4k2a;Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha;Phosphatidylinositol 5-phosphate 4-kinase type-2 beta no no 0 0 0 1 11 0 1 52.917 52.917 4 0.00091317 12742 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.499 59.034 0 0 626.07 494.98 0 0 0 0 599 487 0 0 0 0 1 1 0 0 10941 9760 1244;2334 9406 22801 26335 26335 1 ILAAQAQLSAQGGAQPSVEAPAPPRPTATQLTR Unmodified 3295.7637 0.76368649 3075 Q9D6M3;E9PY45;E9PV90;A0A0J9YTY6 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 1 7.5 4.82 2 2 1 1 62.983 62.983 4;5 3.767E-37 19330 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.599 79.967 153.92 88.149 173.51 83.191 166.56 223.94 144 84 167 79 167 214 3 3 3 2 4 4 52244 9761 3075 9407 22802;22803;22804;22805;22806;22807 26336;26337;26338;26339;26340;26341 26338 6 ILACDDLDEAAK Unmodified 1332.6231 0.6231314 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 7.33 4.03 1 1 1 63.649 63.649 2;3 1.1877E-26 22489 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 174.98 128.82 108.64 92.812 56.361 167.85 136.84 126.12 102 95 56 159 139 120 2 2 1 3 2 2 38174 9762 3397 9408 22808;22809;22810 26342;26343;26344 26343 3 ILACGGDGTVGWILSTLDQLR Unmodified 2244.1573 0.15725228 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 0 10.5 0.5 1 1 109.43 109.43 3 5.7698E-11 34046 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.442 71.682 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 1855.9 9763 466 9409 22811;22812 26345;26346 26345 2 ILADLEEENR Unmodified 1200.5986 0.59863121 438 A2A9Z1;A2A9Z2;P11531 Dmd Dystrophin yes no 0 0 0 0 4 0 1 65.572 65.572 2 0.05469 23401 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.528 15.332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9764 438 9410 22813 26347 26347 1 ILAEGGGAK Unmodified 814.45487 0.45486751 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 48.207 48.207 2;3 0.0035629 13726 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.692 26.589 148.33 78.736 136.75 121.32 147.32 213.26 139 74 130 120 149 204 1 2 1 2 2 3 25787 9765 2361 9411 22814;22815;22816 26348;26349;26350 26348 3 ILAFPCNQFGR Unmodified 1321.6601 0.66012603 1251 O70325;S4R1E5 Gpx4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial;Glutathione peroxidase yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 71.59 71.59 2 5.4851E-10 20697 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 137.88 105.56 79.205 203.55 114.55 202.4 246.66 200.87 74 195 121 195 250 194 2 3 2 3 3 2 87570 9766 1251 9412 22817;22818;22819;22820;22821 26351;26352;26353;26354;26355 26353 5 ILAGDKNYITEDELR Deamidation (N) 1749.8785 0.87849447 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 1 0 1 6 0 1 64.32 64.32 3 0.00015456 22045 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.878 46.398 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9767 418 9413 22822 26356 26356 113 1 ILAGDYEFDSPYWDDISQAAK Unmodified 2403.0907 0.090672086 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 6.33 0.471 2 1 89.704 89.704 3;4 3.7209E-11 33810 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.666 81.794 54.272 45.73 36.979 48.074 8.727 40.259 51 47 37 46 9 38 2 2 1 2 1 2 16522 9768 1986 9414 22823;22824;22825 26357;26358;26359 26358 3 ILAHWACYK Unmodified 1160.5801 0.5800848 1076 G3X8X7;Q920Q4 Vps16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 0 12 0 1 60.964 60.964 3 0.001284 14543 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.738 59.514 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9769 1076 9415 22826 26360 26360 1 ILALAPTFEMNPMK Unmodified 1574.8201 0.82005707 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 11 0 1 88.287 88.287 3 8.5771E-08 28158 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.77 92.814 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16611 9770 1362 9416 22827 26361 26361 1 ILALAPTFEMNPMK Oxidation (M);Deamidation (N) 1591.799 0.79898728 1362 P12960 Cntn1 Contactin-1 yes yes 0 1 1 0 11 0 1 88.28 88.28 3 0.0019676 28219 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.967 33.014 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 1244.1 9771 1362 9416 22828 26362 26362 433 81 1 ILALAPTFEMNPMKK Unmodified 1702.915 0.91502009 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 12 0 1 80.402 80.402 4 0.039876 21937 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.317 22.456 0 29.024 45.96 46.477 56.441 0 0 28 46 46 56 0 0 1 1 1 1 0 2843.7 9772 1362 9417 22829 26363 26363 1 ILALLENF Unmodified 931.53787 0.53786886 2979 Q9CWL8 Ctnnbl1 Beta-catenin-like protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 112.67 112.67 2 0.026471 34353 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.415 60.002 0 2.128 0 5.4303 9.0726 0 0 2 0 5 9 0 0 1 0 1 3 0 2348.5 9773 2979 9418 22830;22831 26364;26365;26366 26364 3 ILAPPGGR Unmodified 779.46537 0.46537261 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 9.5 0.5 1 1 47.425 47.425 2 0.015187 11784 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.064 74.593 472.63 360.72 799.62 91.77 937.06 886.82 445 377 765 93 929 857 2 2 3 1 3 3 270060 9774 3172 9419 22832;22833 26367;26368;26369 26367 3 ILAQATSDLVNAIK Unmodified 1455.8297 0.82969378 1450 P26039;F6SX70;F6S1V7 Tln1 Talin-1 yes no 0 0 0 0 10 0 1 88.896 88.896 2 0.018692 28769 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.44 31.114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9775 1450 9420 22834 26370 26370 1 ILASDKPYILAEELR Unmodified 1729.9614 0.96143623 3209 Q9JI91 Actn2 Alpha-actinin-2 yes yes 0 0 0 1 7 0 1 75.968 75.968 3 0.0019689 26706 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.937 31.638 59.52 34.245 66.396 35.463 54.291 77.335 56 37 65 37 56 74 1 1 1 1 1 1 4597.1 9776 3209 9421 22835 26371 26371 1 ILASLGDR Unmodified 843.48142 0.48141661 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R235 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 9 0 1 58.899 58.899 2 0.012195 17333 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.37 41.614 109.45 0 0 142.09 0 0 102 0 0 130 0 0 1 0 0 1 0 0 15014 9777 3447 9422 22836 26372 26372 1 ILATPPQEDAPSVDIANIR Unmodified 2019.0637 0.063669474 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 8.8 3.49 1 1 1 2 73.337 73.337 2;3 3.8382E-27 26966 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.22 115.16 69.385 96.884 184.14 87.948 65.976 137.53 65 93 176 83 65 130 2 3 3 2 2 2 105550 9778 1537 9423 22837;22838;22839;22840;22841 26373;26374;26375;26376;26377;26378 26373 6 ILATSFICTLPAGHR Unmodified 1655.8817 0.88174613 950 Q68FL6;E9QB02;F6W0G8 Mars Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 0 1 0 1 70.874 70.874 3 1.113E-22 24023 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.12 97.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9779 950 9424 22842 26379 26379 1 ILAVGTQTGALR Unmodified 1198.7034 0.70337105 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 0 10 0 1 59.874 59.874 2 8.1822E-13 15967 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.51 82.796 0 43.34 80.658 49.836 58.478 58.027 0 42 79 51 60 56 0 1 1 1 1 1 13005 9780 738 9425 22843 26380 26380 1 ILCLFDVDGTLTPAR Unmodified 1689.876 0.87599205 1200 O35621;Q9D6D9;Q91W01;A0A2R8W6J8;D6RG76 Pmm1 Phosphomannomutase 1;Phosphomannomutase yes no 0 0 0 0 11 0 1 90.957 90.957 2 0.0037825 29200 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.353 39.781 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9781 1200 9426 22844 26381 26381 1 ILDDDTIITTLENLK Unmodified 1715.9193 0.91929665 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 100.63 100.63 3 3.13E-05 37266 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.592 70.626 24.578 14.998 22.032 45.495 31.241 49.479 23 16 21 42 33 47 2 3 2 2 3 3 7868.8 9782 3204 9427 22845;22846;22847;22848 26382;26383;26384;26385 26382 4 ILDDDTIITTLENLKR Unmodified 1872.0204 0.020407676 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 11 2 1 1 91.692 91.692 3 4.2786E-05 32590 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.895 80.88 48.771 65.144 43.493 108.26 33.903 107.76 46 65 46 102 37 102 1 1 1 2 1 2 7722 9783 3204 9428 22849;22850 26386;26387 26386 2 ILDEIEEHSIK Unmodified 1324.6874 0.68744622 899 E9Q3V6;P42208;F6WYM0;D3YYB1;D3Z3C0 Sept2 Septin-2 yes no 0 0 0 0 7.33 4.03 1 1 1 68.007 68.007 3 0.0015024 24667 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.344 35.332 129.21 39.368 103.94 163.16 177.65 20.254 121 37 102 158 177 19 3 1 2 3 3 1 22207 9784 899 9429 22851;22852;22853 26388;26389;26390;26391 26391 4 ILDELEK Unmodified 858.46985 0.46984887 1276 O88741 Gdap1 Ganglioside-induced differentiation-associated protein 1 yes yes 0 0 0 0 6 0 1 68.012 68.012 2 0.02936 23810 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.794 3.0414 0 0 0 60.018 63.245 57.891 0 0 0 56 65 56 0 0 0 1 1 1 2473.8 9785 1276 9430 22854 26392 26392 1 ILDELTLCK Unmodified 1103.5896 0.58964643 664;649 CON__Q9UE12;CON__Q15323;CON__REFSEQ:XP_986630;Q8K0Y2;Q61897;B1AQ75;CON__O76011;CON__Q8IUT8;CON__Q9D646;CON__A2A5Y0;Q9D646;Q61765 Krt33a;Krt33b;Krt36;Krt34;Krt31 Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha6;Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha1 no no 0 0 0 0 7 0 1 77.703 77.703 3 0.010185 27464 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.549 31.46 9.5414 0 19.428 0 0 78.884 9 0 18 0 0 74 1 0 1 0 0 1 2801.6 + 9786 664;649 9431 22855 26393 26393 1 ILDETQEAVEYQR Unmodified 1592.7682 0.76821574 606 B1AZ42;P0C0A3 Chmp6 Charged multivesicular body protein 6 yes no 0 0 0 0 3 1 1 1 60.963 60.963 3 0.001211 21383 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.196 36.96 20.207 0 30.194 0 0 58.63 19 0 28 0 0 55 1 0 1 0 0 1 4419.6 9787 606 9432 22856;22857 26394;26395 26395 2 ILDFSTTPDLPDQVLR Unmodified 1828.9571 0.95707914 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 6 0 1 86.461 86.461 3 0.0035361 32402 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.567 23.904 0 19.566 38.86 0 0 29.848 0 19 37 0 0 28 0 1 1 0 0 1 2381.6 9788 62 9433 22858 26396 26396 1 ILDIACWVHHK Unmodified 1390.718 0.71797526 1049 F8WIR1;P18242 Ctsd Cathepsin D yes no 0 0 0 0 11.3 1.25 1 1 1 68.652 68.652 4 0.00073558 25186 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.893 26.337 106.42 112.54 130.58 270.86 236.31 97.165 102 111 130 259 241 93 2 2 2 4 4 1 65871 9789 1049 9434 22859;22860;22861 26397;26398;26399;26400;26401 26401 5 ILDILGETCK Unmodified 1160.6111 0.61111015 716 S4R1M2;D3YXK2;Q80YR5 Safb;Safb2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 0 0 0 0 8 0 1 80.515 80.515 3 0.00087411 28291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.098 52.881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2687.4 9790 716 9435 22862 26402 26402 1 ILDISNVDLAMGK Unmodified 1387.7381 0.73810158 1211 O35857 Timm44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 0 8 0 1 83.526 83.526 3 0.0064673 29709 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.12 29.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9791 1211 9436 22863 26403 26403 1 ILDKCNEIISWLDK Unmodified 1745.9022 0.9022068 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 9 0.816 1 1 1 84.81 84.81 3 9.4722E-07 30437 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.98 65.329 138.95 101.82 68.431 119.05 75.399 196.96 130 102 65 111 74 186 2 2 2 2 2 3 28334 9792 1762 9437 22864;22865;22866 26404;26405;26406;26407 26404 4 ILDLGITGPEGHVLSRPEEVEAEAVNR Unmodified 2899.5039 0.50394955 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 1 7.5 2.63 1 2 1 1 1 70.296 70.296 4;5 1.3588E-52 25827 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.41 133.37 542.5 480.43 387.34 312.83 498.19 575.78 510 492 388 300 495 553 9 9 6 7 7 9 309180 9793 1158 9438 22867;22868;22869;22870;22871;22872 26408;26409;26410;26411;26412;26413;26414;26415;26416;26417;26418 26409 11 ILDPAASVPSVFIEPR Unmodified 1709.9352 0.93522148 669 D3YTS3;Q68FD9 D630045J12Rik;Kiaa1549 UPF0606 protein KIAA1549 yes no 0 0 0 0 7 0 1 84.817 84.817 3 0.051301 30906 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.233 16.88 0 58.658 55.418 37.138 0 39.442 0 56 56 37 0 37 0 1 1 1 0 1 2764.3 9794 669 9439 22873 26419 26419 1 ILDSVGIEADDDR Unmodified 1416.6733 0.67325272 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 4 0 1 66.884 66.884 3 0.00010688 24011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.629 70.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3255 9795 1865 9440 22874 26420 26420 1 ILDSVGIEADDDRLNK Unmodified 1771.8952 0.89520716 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 0 0 1 4.8 0.748 2 2 1 66.447 66.447 3;4 5.2333E-11 23695 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117 76.194 157.74 152.96 244.27 276.04 285.49 340.7 148 148 240 270 287 325 2 2 3 4 3 4 40060 9796 1865 9441 22875;22876;22877;22878;22879 26421;26422;26423;26424;26425;26426 26425 6 ILDWHVANTDKK Unmodified 1438.7569 0.75686319 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 1 13 0 1 56.524 56.524 4 0.0069301 19460 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.448 29.352 622.23 469.8 701.53 599.59 707.2 748.41 586 492 702 599 727 721 1 1 1 1 1 1 15359 9797 246 9442 22880 26427 26427 1 ILEAVPQVK Unmodified 995.60153 0.60153174 3157 Q9DCZ1;F6VY18 Gmpr GMP reductase 1 yes no 0 0 0 0 9 0 1 66.335 66.335 3 0.021529 20930 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.794 35.806 39.701 0 0 30.604 0 88.478 37 0 0 28 0 83 1 0 0 1 0 1 2853.7 9798 3157 9443 22881 26428 26428 1 ILEDKEGTLPAALVQPR Unmodified 1849.0309 0.030912783 2911 Q9CQ60;D3Z4X1 Pgls 6-phosphogluconolactonase yes no 0 0 0 1 7 0 1 69.291 69.291 3 0.0019765 23589 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.827 26.995 78.817 0 98.295 43.412 53.596 86.949 74 0 93 46 56 83 1 0 1 1 1 1 4381.2 9799 2911 9444 22882 26429 26429 1 ILEFFGLK Unmodified 965.5586 0.5586043 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 4.67 5.19 2 1 95.653 95.653 2 0.0019795 33102 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.34 63.656 88.476 117.03 138.48 80.972 127.42 106.98 83 117 136 80 128 103 4 6 7 5 6 4 20680 9800 1331 9445 22883;22884;22885 26430;26431;26432;26433;26434;26435;26436;26437 26430 8 ILEFYSK Unmodified 898.48002 0.48001963 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 10 0 1 70.878 70.878 2 0.031524 20919 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.064 35.025 78.533 72.018 85.089 0 102.73 115.39 74 74 83 0 102 111 1 1 1 0 1 1 3568.5 9801 3176 9446 22886 26438 26438 1 ILEGLEK Unmodified 800.46437 0.46436956 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10 3 1 1 64.821 64.821 2;3 0.03134 21721 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.212 15.867 118.24 58.502 209.68 155.87 171.77 291.45 111 56 204 157 176 278 1 1 2 2 1 2 27832 9802 510 9447 22887;22888 26439;26440 26439 2 ILEHFLETIR Unmodified 1269.7081 0.70812208 516 A2ASW8;Q9EQZ6 Rapgef4 Rap guanine nucleotide exchange factor 4 yes no 0 0 0 0 9.5 0.5 1 1 79.6 79.6 3 0.011822 27225 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.092 23.35 0 29.792 0 29.723 46.817 28.512 0 28 0 28 47 28 0 1 0 2 2 2 4348.5 9803 516 9448 22889;22890 26441;26442 26441 2 ILEIISSLK Unmodified 1014.6325 0.63249752 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 12 0 1 93.358 93.358 2 0.0033185 26768 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.087 40.283 30.044 0 0 0 48.116 0 28 0 0 0 46 0 1 0 0 0 1 0 4544.9 9804 1420 9449 22891 26443 26443 1 ILELIPR Unmodified 852.54329 0.54328858 1277 Q3UDC3;O88746;A0A1D5RL90 Tom1 Target of Myb protein 1 yes no 0 0 0 0 10 0 1 75.534 75.534 2 0.033105 22827 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.801 36.734 99.522 52.873 0 68.576 131.27 45.29 93 56 0 65 130 46 1 1 0 1 1 1 8284.7 9805 1277 9450 22892 26444 26444 1 ILEMGITGPEGHALSRPEELEAEAVFR Unmodified 2950.4859 0.48585664 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 6 0 1 76.34 76.34 4 3.638E-20 27803 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.875 66.603 29.923 0 20.407 0 0 39.442 28 0 19 0 0 37 1 0 1 0 0 1 4442.8 9806 1850;2212 9451 22893 26445 26445 1 ILEPGLNVLIPVLDR Unmodified 1659.9923 0.99234243 2827 Q99JB2;A2AG41 Stoml2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 96.413 96.413 2;3 4.7527E-05 34715 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.41 52.975 7.4533 0 30.258 0 18.828 7.462 7 0 28 0 18 7 1 0 2 0 1 1 4008 9807 2827 9452 22894;22895 26446;26447 26446 2 ILEQEEEEEQAGK Unmodified 1530.7049 0.70494678 2877 Q99MR6;A0A0G2JDF1;A0A0G2JDN3 Srrt Serrate RNA effector molecule homolog yes no 0 0 0 0 2.5 0.5 1 1 54.589 54.589 3 5.2956E-07 18306 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.204 63.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9808 2877 9453 22896;22897 26448;26449 26448 2 ILEQFPGGSIDLLK Unmodified 1528.8501 0.85009487 3100 Q9D9V3;E0CXS3 Echdc1 Ethylmalonyl-CoA decarboxylase yes no 0 0 0 0 7 0 1 87.18 87.18 3 0.0034979 32055 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.298 26.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9809 3100 9454 22898 26450 26450 1 ILEQMAESVLSLHVPR Unmodified 1820.9819 0.9818541 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 10 0 1 93.587 93.587 3 0.0010328 30538 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.495 30.832 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 1925.8 9810 677 9455 22899 26451 26451 1 ILEQQNSSR Deamidation (N) 1074.5306 0.53055165 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 5 0 2 41.464 41.464 2 0.059619 11293 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.136 44.328 39.034 65.584 134.08 55.04 81.99 156.49 37 65 130 56 83 149 1 1 2 1 1 2 26364 9811 879 9456 22900;22901 26452;26453 26452 2 ILEQQNSSR Unmodified 1073.5465 0.54653606 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 8.5 2.69 1 1 1 1 38.008 38.008 2 6.4679E-35 9802 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 204.79 137.29 206.85 288.5 474.07 313.22 263.98 59.696 195 287 468 315 258 56 2 3 4 3 2 1 57867 9812 879 9456 22902;22903;22904;22905 26454;26455;26456;26457 26454 4 ILETLYTLGK Unmodified 1149.6645 0.66452593 2524 Q8CDM8 Fam160b1 Protein FAM160B1 yes yes 0 0 0 0 10.5 0.5 1 1 86.99 86.99 3 0.0022613 27554 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 46.972 20.268 0 40.244 17.275 0 40.508 19 0 38 18 0 38 1 0 2 2 0 2 3041.1 9813 2524 9457 22906;22907 26458;26459 26459 2 ILETTFIPTIEDTGK Unmodified 1676.8873 0.88726824 1487 Q3UPN1;P29533 Vcam1 Vascular cell adhesion protein 1 yes no 0 0 0 0 6.5 0.5 1 1 84.508 84.508 3 0.0009402 30728 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.527 27.2 39.701 0 0 79.868 53.935 28.309 37 0 0 74 56 28 1 0 0 1 1 1 2243.9 9814 1487 9458 22908;22909 26460;26461 26461 2 ILETWGELLSK Unmodified 1287.7075 0.70745338 532 A2AWA9 Rabgap1 Rab GTPase-activating protein 1 yes yes 0 0 0 0 10 1 1 1 93.137 93.137 3 0.00030496 33225 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.813 45.236 0 20.216 0 9.837 0 0 0 19 0 9 0 0 0 1 0 1 0 0 3452.2 9815 532 9459 22910;22911 26462;26463 26462 2 ILEVHIDK Unmodified 965.55458 0.55458155 1765 P63037;B1AXY1 Dnaja1 DnaJ homolog subfamily A member 1 yes no 0 0 0 0 7 0 1 59.195 59.195 3 0.015607 18864 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.598 9.3154 78.655 52.931 80.712 123.96 127.01 95.514 74 56 83 120 130 93 1 1 1 1 1 1 6786 9816 1765 9460 22912 26464 26464 1 ILEVHVDK Unmodified 951.53893 0.53893149 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 9.5 3.5 1 1 54.727 54.727 3 0.016678 18340 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.729 14.62 148.14 116.53 69.681 155.99 144.33 96.353 139 120 74 149 148 93 2 2 1 2 2 1 17130 9817 3279 9461 22913;22914 26465;26466 26466 2 ILEVVKDK Unmodified 942.57498 0.57498264 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 1 10 1.87 1 1 1 1 62.204 62.204 3 0.0068749 19103 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.692 36.732 1944.7 1057.5 2890.6 1935.2 1036 2535.2 1831 1064 2799 1946 1075 2406 5 4 5 6 4 6 127120 9818 1360 9462 22915;22916;22917;22918 26467;26468;26469;26470;26471;26472 26469 6 ILFCDVLR Unmodified 1034.5583 0.55828672 1094 Q8R3B1;G5DDB7;Q05DG3 Plcd1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1;Phosphoinositide phospholipase C yes no 0 0 0 0 10 0 1 76.544 76.544 2 0.012347 23329 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.752 46.917 0 69.16 0 71.045 0 59.696 0 65 0 65 0 56 0 1 0 1 0 1 4714.9 9819 1094 9463 22919 26473 26473 1 ILFDGIPLEK Unmodified 1143.654 0.65396125 1391 P16332 Mut Methylmalonyl-CoA mutase, mitochondrial yes yes 0 0 0 0 8 0 1 83.288 83.288 3 0.034278 29611 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.001 23.689 39.302 36.109 36.426 27.906 28.006 0 37 37 37 28 28 0 1 1 1 1 1 0 1689 9820 1391 9464 22920 26474 26474 1 ILFEFAK Unmodified 866.49019 0.49019038 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 0 0 0 10 0 1 80.167 80.167 2 0.037637 25062 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.18 37.153 0 48.013 55.69 45.365 84.734 0 0 46 56 46 83 0 0 1 1 1 1 0 7263.2 9821 1603 9465 22921 26475 26475 1 ILFEITAGALGK Unmodified 1231.7176 0.71762413 2907 Q9CQ10 Chmp3 Charged multivesicular body protein 3 yes yes 0 0 0 0 11 0 1 93.505 93.505 3 0.0006596 30127 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.408 40.668 0 0 19.685 19.594 0 20.254 0 0 19 19 0 19 0 0 1 1 0 1 2571.4 9822 2907 9466 22922 26476 26476 1 ILFFSTPK Unmodified 951.54295 0.54295423 1921 Q3TG45;Q9CPS5;Q9CX56 Psmd8 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 0 4 5.2 3 1 78.155 78.155 2;3 1.3459E-07 27317 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 170.32 98.087 384.95 14.896 403.97 308.16 447.06 428.57 361 14 387 307 455 414 4 1 4 4 5 5 42336 9823 1921 9467 22923;22924;22925;22926 26477;26478;26479;26480;26481;26482 26477 6 ILFHFAK Unmodified 874.50651 0.50650915 437 A2A9W7;Q8BMI3 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 0 0 0 0 12 0 1 64.011 64.011 3 0.021803 15622 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.151 33.928 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9824 437 9468 22927 26483 26483 1 ILFIFIDSDHTDNQR Unmodified 1832.9057 0.90571227 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 10 0 1 84.075 84.075 3 0.059533 26691 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.285 13.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9825 1331 9469 22928 26484 26484 1 ILFRPVASQLPR Unmodified 1395.8351 0.83505393 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 1 7 6 1 1 60.854 60.854 3 9.628E-12 20440 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.74 84.033 206.26 61.337 267.32 183.98 121.9 163.88 194 65 259 185 130 157 2 1 2 2 2 2 121980 9826 1788 9470 22929;22930 26485;26486 26485 2 ILGADTSVDLEETGR Unmodified 1574.7788 0.77878042 1881 Q03265;D3Z6F5;D6RJ16 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 6.3 3.55 2 2 2 1 1 2 65.584 65.584 2;3 2.2074E-32 23137 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 164.53 140.57 396.41 382.75 382.34 414.29 540.93 647.41 372 381 370 399 547 622 10 9 8 8 12 13 342220 9827 1881 9471 22931;22932;22933;22934;22935;22936;22937;22938;22939;22940 26487;26488;26489;26490;26491;26492;26493;26494;26495;26496;26497;26498;26499;26500;26501;26502;26503;26504 26494 18 ILGAWLAEETSSLR Unmodified 1544.8199 0.81985738 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10 1.87 1 1 1 1 89.653 89.653 2;3 0.00011616 31555 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.087 66.529 59.863 47.971 49.623 0 96.261 29.608 56 46 47 0 93 28 3 3 2 0 4 1 48822 9828 3355 9472 22941;22942;22943;22944 26505;26506;26507;26508;26509;26510 26506 6 ILGAWLAEETSSLRK Unmodified 1672.9148 0.91482039 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 1 9.8 0.748 2 2 1 81.761 81.761 3;4 2.4234E-05 25761 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.004 27.23 363.17 227.31 513.9 338.44 251.97 301.71 342 232 503 342 259 288 5 3 5 5 4 4 89719 9829 3355 9473 22945;22946;22947;22948;22949 26511;26512;26513;26514;26515;26516 26513 6 ILGDYDIK Unmodified 935.4964 0.49639797 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 67.093 67.093 2 0.0042012 22748 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 119.27 64.725 892.56 494.47 1171 600.23 989.03 812.98 839 506 1135 593 996 779 5 4 6 4 6 4 356780 9830 2173 9474 22950;22951;22952;22953 26517;26518;26519;26520;26521;26522;26523 26520 7 ILGEDSSK Unmodified 847.42871 0.42871234 2090 Q60854;K7E6F1;F8WIV2;E9Q3Y1;E9Q6X2;E9Q108;E9Q0P9;E9PZQ9;E9Q4R2;E9PYY0 Serpinb6;Serpinb6a Serpin B6 yes no 0 0 0 0 6 0 1 49.841 49.841 3 0.030867 15182 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.418 18.046 0 38.773 35.585 47.647 27.099 0 0 37 37 46 28 0 0 1 1 1 1 0 1779.8 9831 2090 9475 22954 26524 26524 1 ILGGVISAISEAAAQYNPEPPPPR Unmodified 2446.2856 0.28562392 143 A0A0R4IZW8;O88456 Capns1 Calpain small subunit 1 yes no 0 0 0 0 12 0.707 1 2 1 100.3 100.3 3;4 4.6943E-23 28514 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.53 105.65 49.044 8.4598 3.1215 19.674 12.445 23.366 47 8 3 18 12 22 3 2 1 1 2 2 30295 9832 143 9476 22955;22956;22957;22958 26525;26526;26527;26528;26529 26528 5 ILGIPVIITEQYPK Unmodified 1582.9334 0.93343057 2731 Q91V64 Isoc1 Isochorismatase domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 88.865 88.865 3 7.4298E-05 28404 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.169 54.625 89.899 75.942 7.9585 40.441 104.74 86.555 84 74 9 37 102 84 2 2 1 1 1 2 17468 9833 2731 9477 22959;22960 26530;26531;26532 26532 3 ILGLGDLGCNGMGIPVGK Deamidation (N) 1770.9008 0.90082659 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 1 0 0 8.5 0.5 1 1 89.133 89.133 3 0.0024618 31468 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.623 32.504 20.387 19 0 0 28.62 19.437 19 19 0 0 28 19 1 1 0 0 1 1 6227.5 9834 1317 9478 22961;22962 26533;26534 26534 386 2 ILGLGDLGCYGMGIPVGK Unmodified 1818.9372 0.93721209 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 10.3 0.471 2 1 91.441 91.441 3;4 4.3881E-07 29329 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.562 57.552 39.701 0 0 30.604 0 28 37 0 0 28 0 28 1 0 0 1 0 1 12700 9835 2432 9479 22963;22964;22965 26535;26536;26537 26537 3 ILGLLDTHLK Unmodified 1121.6808 0.6808447 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 11.5 1.12 1 1 1 1 74.435 74.435 3 1.1449E-05 21962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.42 68.987 708.45 473.61 635.44 560.08 123.26 647.81 666 500 636 543 120 611 4 4 3 2 1 3 236910 9836 3094 9480 22966;22967;22968;22969 26538;26539;26540;26541 26539 4 ILGNLLQPPNERPELPSGLYVLGLTGISGSGK Unmodified 3288.8082 0.80817706 3128 Q9DBL7 Coasy Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 1 11 0 1 95.92 95.92 4 0.0147 31235 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 28.673 22.446 20.387 0 0 9.6683 8.9699 0 19 0 0 9 9 0 1 0 0 1 1 0 1941.8 9837 3128 9481 22970 26542 26542 1 ILGPGLNK Unmodified 810.49634 0.49633839 1613 P53026;Q5XJF6 Rpl10a 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 0 11 1.22 2 1 1 59.124 59.124 2;3 0.0038011 15726 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.616 45.495 292.3 353.55 338.28 297.38 45.122 343.03 280 352 337 288 46 323 3 3 2 2 1 2 56992 9838 1613 9482 22971;22972;22973;22974 26543;26544;26545;26546 26544 4 ILGPLADYLVVNVSSPNTAGLR Unmodified 2268.2478 0.24778185 881 E9Q1V3;O35435 Dhodh Dihydroorotate dehydrogenase (quinone), mitochondrial yes no 0 0 0 0 12 0 1 96.234 96.234 3 3.2407E-06 27558 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.117 43.633 9.657 0 0 0 0 5.33 9 0 0 0 0 5 1 0 0 0 0 1 685.96 9839 881 9483 22975 26547 26547 1 ILGPQGNTIK Unmodified 1039.6026 0.60259438 2085 Q60749 Khdrbs1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 0 10 0 1 55.682 55.682 2 0.00018837 14068 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.055 50.186 29.952 18.196 0 0 43.932 0 28 19 0 0 42 0 1 1 0 0 1 0 4732.1 9840 2085 9484 22976 26548 26548 1 ILGTLALIDQSETDWK Unmodified 1801.9462 0.9461801 2743 Q91VM9;D3Z636;G8JL76 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 9 0 1 94.628 94.628 3 4.4331E-05 33897 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.647 68.572 0 69.065 5.6829 51.032 37.384 38.375 0 65 9 47 37 37 0 2 1 1 1 1 8647.2 9841 2743 9485 22977 26549;26550 26550 2 ILGYLNSNVLSR Deamidation (N) 1348.7351 0.73506511 164 A0A0R4J087;Q8BJI1;A0A0R4J252 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17 yes no 0 1 0 0 1 0 1 77.232 77.232 3 0.063432 26691 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.425 24.605 0 0 38.796 27.784 27.013 29.077 0 0 37 28 28 28 0 0 1 1 1 1 13948 9842 164 9486 22978 26551 26551 1 ILGYLNSNVLSR Unmodified 1347.751 0.75104953 164 A0A0R4J087;Q8BJI1;A0A0R4J252 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17 yes no 0 0 0 0 11.5 0.5 1 1 76.764 76.764 2;3 3.525E-23 20534 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 164.04 114 129.42 0 106.51 129.42 35.103 137.58 121 0 102 121 37 130 2 0 2 2 1 2 39923 9843 164 9486 22979;22980 26552;26553;26554 26554 3 ILGYTLK Unmodified 806.49019 0.49019038 3365 Q9Z0V2;Q9Z0V1;Q03719 Kcnd2;Kcnd3;Kcnd1 Potassium voltage-gated channel subfamily D member 2;Potassium voltage-gated channel subfamily D member 3;Potassium voltage-gated channel subfamily D member 1 yes no 0 0 0 0 11.5 0.5 1 1 67.482 67.482 2 0.027409 16848 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.262 38.821 99.225 108.53 94.807 218.5 228.04 255.73 93 102 93 209 236 246 1 1 1 2 2 2 19697 9844 3365 9487 22981;22982 26555;26556 26556 2 ILHCLELASDIQR Unmodified 1566.8188 0.81881152 2992 Q9CY64 Blvra Biliverdin reductase A yes yes 0 0 0 0 7 0 1 66.957 66.957 3 0.0013728 22491 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.227 29.928 0 29.792 0 0 18.867 29.31 0 28 0 0 19 28 0 1 0 0 1 1 2558.7 9845 2992 9488 22983 26557 26557 1 ILHIDDYELPLQLSFPK Unmodified 2040.0932 0.093178689 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 8.5 0.5 1 1 89.562 89.562 3;4 0.002047 31619 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.791 32.937 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 1753.9 9846 967 9489 22984;22985 26558;26559 26559 2 ILHLLGK Unmodified 792.52216 0.52215921 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 0 1 0 1 68.337 68.337 3 0.018011 23179 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.994 31.894 79.108 0 49.373 0 56.581 58.081 74 0 46 0 56 56 1 0 1 0 1 1 4549.3 9847 3265 9490 22986 26560 26560 1 ILHNDPEVEK Unmodified 1192.6088 0.60880197 1081;615 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;F8VPL5;E9PVG7;A0A0A6YW53;A0A0A6YWM8;A0A0A6YWR8;B2RUE8;B7ZNR9;P97820;E0CZF8;E0CZD7;E0CXD6;E0CY98;E9PUL9;B9EKN8;B2RQ80;P83510 Mink1;Map4k4;Tnik Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4;Traf2 and NCK-interacting protein kinase no no 0 0 0 0 5 0 1 46.26 46.26 3 0.023511 14180 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.158 20.339 0 48.16 46.882 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 2800.5 9848 1081;615 9491 22987 26561 26561 1 ILHSHLVDYFPEFDGPQR Unmodified 2169.0643 0.064338176 1427 P21278 Gna11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 0 0 0 0 7 0 1 71.859 71.859 4 0.00056191 24668 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.535 33.9 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 3769.2 9849 1427 9492 22988 26562 26562 1 ILHTAWHPK Unmodified 1101.6083 0.60834846 2211 Q6P1F6 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform yes yes 0 0 0 0 11 0.816 1 1 1 46.094 46.094 4 0.0010212 9867 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.279 61.377 119.17 44.001 401.86 111.78 87.944 476.12 112 46 379 111 93 449 2 1 3 2 1 3 38707 9850 2211 9493 22989;22990;22991 26563;26564;26565 26564 3 ILHTYYK Unmodified 936.5069 0.50690308 2639 Q8R1B4 Eif3c Eukaryotic translation initiation factor 3 subunit C yes yes 0 0 0 0 11 0 1 48.339 48.339 3 0.005933 10908 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.086 69.16 0 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 0 0 8062.4 9851 2639 9494 22992 26566 26566 1 ILHVLGSIR Unmodified 1006.6287 0.62874955 3286 Q9QZB7 Actr10 Actin-related protein 10 yes yes 0 0 0 0 1 0 1 62.45 62.45 3 0.051329 20771 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.352 12.178 20.387 0 0 20.424 18.258 19.733 19 0 0 19 19 19 1 0 0 1 1 1 2308 9852 3286 9495 22993 26567 26567 1 ILIANTGMDTDK Unmodified 1290.649 0.64895222 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 9 0 1 64.91 64.91 3 0.044587 20272 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.426 19.561 0 39.368 0 61.208 0 0 0 37 0 56 0 0 0 1 0 1 0 0 3208.6 9853 1823 9496 22994 26568 26568 1 ILIGSSFPLSGGR Unmodified 1302.7296 0.7295858 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 6.5 5.5 1 1 75.311 75.311 2 3.255E-23 19801 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 166.66 100.85 97.139 27.776 90.133 119.13 35.975 119.43 91 28 86 114 37 113 3 1 3 3 1 3 26951 9854 1893 9497 22995;22996 26569;26570;26571;26572 26571 4 ILIIGESGVGK Unmodified 1084.6492 0.64921022 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 10 0.816 1 1 1 71.234 71.234 2 5.4155E-10 21113 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 137.95 84.787 69.126 111.11 139.64 83.983 204.64 142.33 65 111 139 83 204 139 1 2 2 1 2 2 13318 9855 1518 9498 22997;22998;22999 26573;26574;26575 26574 3 ILILGLDGAGK Unmodified 1068.6543 0.6542956 871 E9Q006;F8WIB1;P61211 Arl1 ADP-ribosylation factor-like protein 1 yes no 0 0 0 0 11 0 1 80.865 80.865 2 0.0014301 24992 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.624 30.908 39.362 0 56.942 77.488 0 0 37 0 56 74 0 0 1 0 1 1 0 0 6571.8 9856 871 9499 23000 26576 26576 1 ILILNNNLLR Unmodified 1194.7448 0.74484194 2353 Q810C1 Slitrk1 SLIT and NTRK-like protein 1 yes yes 0 0 0 0 1 0 1 78.001 78.001 2 5.1627E-07 27180 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.77 97.606 39.283 26.341 47.994 0 0 29.848 37 28 46 0 0 28 1 1 1 0 0 1 3212.8 9857 2353 9500 23001 26577 26577 1 ILIPWLLSPER Unmodified 1335.7915 0.79145778 2398 Q8BH66 Atl1 Atlastin-1 yes yes 0 0 0 0 4.67 5.19 2 1 97.04 97.04 2 1.6423E-08 27321 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.9 58.454 16.001 5.2205 26.946 25.219 26.593 42.947 15 5 26 25 27 41 2 1 3 4 2 4 5302.4 9858 2398 9501 23002;23003;23004 26578;26579;26580;26581;26582;26583 26583 6 ILIRPLYSNPPLNGAR Unmodified 1793.0312 0.031187555 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 4.67 5.19 2 1 64.339 64.339 3;4 3.5626E-44 15527 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 146.37 132.46 59.814 0 162.44 160.14 113.86 155.79 56 0 157 157 121 148 1 0 2 2 3 2 47813 9859 1312 9502 23005;23006;23007 26584;26585;26586;26587 26587 4 ILIRPLYSNPPLNGAR Deamidation (N) 1794.0152 0.015203139 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 1 0 1 9.73 4.2 2 1 3 3 2 66.58 66.58 3 1.9316E-90 16422 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 219.84 181.08 3744.3 2570.6 4053.5 2674.1 2982.8 3745.1 3518 2658 4002 2631 3036 3589 14 11 15 13 11 13 1236300 9860 1312 9502 23008;23009;23010;23011;23012;23013;23014;23015;23016;23017;23018 26588;26589;26590;26591;26592;26593;26594;26595;26596;26597;26598;26599;26600;26601;26602;26603;26604;26605;26606;26607;26608;26609 26603 379 22 ILISLATGNREEGGENR Unmodified 1827.9439 0.94388869 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 1 10.5 0.5 1 1 59.981 59.981 3 9.0353E-13 16239 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.498 53.406 48.955 25.724 45.864 47.545 0 69.29 46 28 46 46 0 65 1 1 1 1 0 1 6257.1 9861 1050;1380 9503 23019;23020 26610;26611 26610 2 ILITTVPPNLR Unmodified 1235.7602 0.76015765 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 11.5 0.5 1 1 70.559 70.559 2 4.4933E-05 20437 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.25 68.956 126.63 315.27 229.07 38.127 165.07 215.23 120 311 223 37 162 204 2 5 2 1 3 3 15695 9862 2991 9504 23021;23022 26612;26613;26614;26615;26616 26613 5 ILKPGSTALK Unmodified 1026.6437 0.64373091 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 1 1 0 1 54.363 54.363 3 0.0082776 16848 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 61.56 21.493 48.682 55.185 66.774 0 103.76 85.517 46 56 65 0 102 83 1 1 1 0 1 1 5147 9863 761 9505 23023 26617 26617 1 ILLAAAPTSK Unmodified 983.60153 0.60153174 966 E9QN41;Q8C079;Q8C9H6 Strip2;Strip1 Striatin-interacting protein 1;Striatin-interacting proteins 2 yes no 0 0 0 0 8 4.97 1 1 1 63.821 63.821 2 1.7222E-09 15507 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 159.37 74.304 121.57 80.051 58.264 49.222 45.855 84.214 114 81 59 49 46 79 3 2 1 1 1 2 17185 9864 966 9506 23024;23025;23026 26618;26619;26620 26620 3 ILLAELEQLK Unmodified 1168.7067 0.7067251 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 10 1.67 1 1 2 1 90.566 90.566 2;3 0.0013651 35719 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.349 44.676 40.622 78.123 84.123 19.665 58.576 50.102 38 75 84 19 56 47 2 3 4 1 2 2 32040 9865 1423 9507 23027;23028;23029;23030;23031 26621;26622;26623;26624;26625;26626 26626 6 ILLANFLAQTEALMK Oxidation (M) 1690.9328 0.93277864 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 1 0 1 0 2 98.156 98.156 3 6.1056E-05 33868 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.707 76.105 32.113 4.6704 8.9855 28.48 32.402 6.223 30 5 9 27 32 6 4 2 1 3 3 1 5927.2 9866 1316 9508 23032;23033 26627;26628;26629;26630 26629 65 4 ILLANFLAQTEALMK Deamidation (N) 1675.9219 0.92187961 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 1 0 0 10.8 1.33 1 1 2 1 104.78 104.78 3 7.6699E-05 33242 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.678 54.015 77.927 7.0676 29.722 16.063 17.668 12.288 75 9 28 15 18 12 4 1 1 1 1 1 7168.2 9867 1316 9508 23034;23035;23036;23037;23038 26631;26632;26633;26634;26635 26632 384 5 ILLANFLAQTEALMK Unmodified 1674.9379 0.93786402 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 13 0 1 107.47 107.47 3 7.4488E-06 43841 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.03 82.815 89.553 23.839 77.13 46.774 0 0 84 28 74 47 0 0 2 1 1 2 0 0 12902 9868 1316 9508 23039 26636;26637 26637 2 ILLDAGFTNELVQNYWSK Unmodified 2110.0735 0.073505879 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 11.2 1.09 1 2 1 97.766 97.766 3;4 3.424E-07 31956 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.362 61.075 34.009 0 55.011 0 19 39.442 32 0 51 0 19 37 2 0 2 0 1 1 9411 9869 882 9509 23040;23041;23042;23043 26638;26639;26640;26641 26638 4 ILLELLNQMDGFDQNVNVK Unmodified 2202.1355 0.13545421 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 10.3 0.471 2 1 109.33 109.33 3;4 8.0566E-36 34039 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 147.09 131.15 14.959 2.5417 14.408 4.9639 9 14.924 14 3 14 5 9 14 2 1 2 1 1 2 3159.9 9870 237 9510 23044;23045;23046 26642;26643;26644;26645 26643 4 ILLHHAANSVK Unmodified 1201.6931 0.69314072 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 9 4.64 1 1 2 41.632 41.632 3;4 8.0619E-05 7991 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.804 73.529 663.16 538.7 666.57 116.52 943.59 691.3 624 555 645 111 925 671 3 2 3 2 3 4 57819 9871 2469 9511 23047;23048;23049;23050 26646;26647;26648;26649;26650 26647 5 ILLHSLR Unmodified 850.53887 0.53887191 557 E9Q449;A6H8H2 Dennd4c DENN domain-containing protein 4C yes no 0 0 0 0 12 0 1 47.936 47.936 3 0.0070259 9493 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.635 0 49.063 0 49.525 0 0 0 46 0 46 0 0 0 1 0 1 0 0 0 10529 9872 557 9512 23051 26651 26651 1 ILLIFEGTNEILR Unmodified 1529.8817 0.88172935 2567 Q8JZN5 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 0 11 0 1 96.724 96.724 2 0.0032019 31559 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.5 21.183 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1838.2 9873 2567 9513 23052 26652 26652 1 ILLISEDLK Unmodified 1042.6274 0.62741214 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 8.5 0.5 1 1 79.586 79.586 2 8.6641E-05 27844 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.23 27.193 99.038 131.25 183.53 189.94 70.338 205.86 93 130 185 185 74 195 2 2 2 2 1 3 32526 9874 2952 9514 23053;23054 26653;26654;26655 26653 3 ILLLEAGPK Unmodified 952.59572 0.59571809 2647 Q8R1S0;D3YW66;F6ZE40;D6RG57 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 73.154 73.154 2 3.7702E-06 22226 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.86 75.581 0 108.53 107.05 163.2 107.38 214.4 0 102 102 157 111 204 0 1 1 2 1 2 1540100 9875 2647 9515 23055;23056 26656;26657 26657 2 ILLLGLDNAGK Unmodified 1125.6758 0.67575932 3334 Q9WUL7 Arl3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 0 13 0 1 81.364 81.364 3 0.00090787 31511 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.881 35.816 29.604 17.227 59.409 0 0 39.442 28 19 56 0 0 37 1 1 1 0 0 1 4462.7 9876 3334 9516 23057 26658 26658 1 ILLNACCPGWVK Unmodified 1429.721 0.72101173 2604 Q8K354 Cbr3 Carbonyl reductase [NADPH] 3 yes yes 0 0 0 0 11.7 0.471 1 2 74.38 74.38 2;3 4.7542E-12 21986 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.86 68.796 30.044 47.816 67.461 0 109.28 46.604 28 46 65 0 106 46 1 1 1 0 2 1 13442 9877 2604 9517 23058;23059;23060 26659;26660;26661 26659 3 ILLNACCPGWVR Unmodified 1457.7272 0.72715974 1582 P48758;A0A1B0GRG8 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 8 4.97 1 1 1 71.297 71.297 2;3 2.758E-19 20546 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 152.34 122.99 89.297 72.458 128.75 38.228 0 69.29 84 75 125 37 0 65 2 2 3 1 0 2 66199 9878 1582 9518 23061;23062;23063 26662;26663;26664 26663 3 ILLNPVQVFDVTK Unmodified 1484.8603 0.86026563 3309 Q9R1C6;F2Z490 Dgke Diacylglycerol kinase epsilon yes no 0 0 0 0 11 1 1 1 90.93 90.93 3 8.2997E-09 29649 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.013 59.324 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1882.9 9879 3309 9519 23064;23065 26665;26666 26665 2 ILLPEPSIR Unmodified 1036.6281 0.62808085 2871 Q99MK8;E9PW16;E9Q419 Adrbk1 Beta-adrenergic receptor kinase 1 yes no 0 0 0 0 8 0 1 67.972 67.972 2 0.014515 22351 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.954 22.047 48.999 0 60.345 0 0 0 46 0 56 0 0 0 1 0 1 0 0 0 3606.2 9880 2871 9520 23066 26667 26667 1 ILLSQAVR Unmodified 898.56 0.56000128 2398 Q8BH66;A0A1Y7VLD6 Atl1 Atlastin-1 yes no 0 0 0 0 11.5 0.5 1 1 57.303 57.303 2 0.0070934 14448 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.36 53.19 83.947 312.33 72.394 58.817 464.9 90.093 79 300 74 60 450 88 1 2 1 1 2 1 59774 9881 2398 9521 23067;23068 26668;26669 26668 2 ILLSSGR Unmodified 744.44939 0.4493882 1823 P80314;A0A1W2P7B7;A0A1W2P828;A0A1W2P6Q3;A0A1W2P871 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 11 1 1 1 49.912 49.912 2 0.0063639 11699 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.02 0 315.61 328.15 418.97 270 472.35 504.6 298 335 418 278 480 486 1 1 1 1 1 1 49305 9882 1823 9522 23069;23070 26670;26671 26670 2 ILLTEPPMNPTK Unmodified 1352.7374 0.7373733 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 10 1.87 1 1 1 1 70.241 70.241 2 2.1005E-18 22806 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 151.07 93.484 119.6 34.219 86.748 79.512 110.16 97.099 112 37 84 75 112 93 2 1 2 2 3 2 18087 9883 1690 9523 23071;23072;23073;23074 26672;26673;26674;26675 26673 4 ILLTNIQTK Unmodified 1042.6386 0.63864553 3128 Q9DBL7 Coasy Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 0 11.5 0.5 1 1 66.814 66.814 2;3 0.00032303 18556 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.27 41.476 69.34 0 68.007 118.31 102.05 75.972 65 0 65 120 102 74 1 0 1 2 1 1 14648 9884 3128 9524 23075;23076 26676;26677 26676 2 ILLVGEPR Unmodified 895.5491 0.54910224 2372 Q8BG51 Rhot1 Mitochondrial Rho GTPase 1 yes yes 0 0 0 0 9 0 1 62.298 62.298 2 0.011481 19013 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.262 46.46 0 0 96.842 84.947 0 0 0 0 93 83 0 0 0 0 1 1 0 0 6616.4 9885 2372 9525 23077 26678 26678 1 ILLWSGR Unmodified 843.49667 0.49667274 3076 Q9D6U8 Fam162a Protein FAM162A yes yes 0 0 0 0 1 0 1 70.045 70.045 2 0.0065262 23868 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 131.3 58.947 65.922 28.307 77.516 60.273 36.523 43.73 62 32 76 60 39 42 1 1 1 1 1 1 18514 9886 3076 9526 23078 26679 26679 1 ILLYHAIK Unmodified 969.60114 0.60113781 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 1 0 1 61.083 61.083 3 0.0075001 20097 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.422 27.434 39.193 45.518 46.843 0 67.99 0 37 46 46 0 65 0 1 1 1 0 1 0 5346.1 9887 3165 9527 23079 26680 26680 1 ILMAAPGMAIPPFIMNTLEK Unmodified 2157.14 0.140011 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 12 0 2 104.25 104.25 3;4 2.1327E-22 29131 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.63 109.61 7.4442 11.081 7.2547 0 6.276 0 7 11 7 0 6 0 1 2 1 0 1 0 2216.9 9888 2832 9528 23080;23081 26681;26682 26682 2 ILMAINGK Unmodified 858.49971 0.49970921 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 0 1 0 1 67.732 67.732 2 0.052267 22736 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.717 16.589 0 0 60.592 0 0 29.848 0 0 56 0 0 28 0 0 1 0 0 1 4532.5 9889 1228 9529 23082 26683 26683 1 ILMLGLDAAGK Unmodified 1100.6264 0.62636629 1725 P62331 Arf6 ADP-ribosylation factor 6 yes yes 0 0 0 0 11.5 0.5 1 1 82.078 82.078 2 2.9528E-09 22761 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.62 71.023 69.086 43.045 74.23 65.259 72.427 57.629 65 46 74 65 74 56 1 1 1 1 1 1 4780.9 9890 1725 9530 23083;23084 26684;26685 26685 2 ILMQYQAR Unmodified 1021.5379 0.53788563 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8;A0A0J9YV63;A0A0J9YUZ2 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 11 0 1 54.7 54.7 2 0.012442 13385 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.369 66.54 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 8545 9891 992 9531 23085 26686 26686 1 ILMSLSAK Unmodified 861.49937 0.49937486 948 Q7TNC9;Q3TZT4;E9QAS7 Inpp5a yes no 0 0 0 0 1 0 1 69.58 69.58 2 0.00055955 23618 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 116.73 64.938 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9892 948 9532 23086 26687 26687 1 ILMVGLDAAGK Oxidation (M) 1102.6056 0.60563084 1693;1833;1834;1700 P84084;D3YV25;E9Q2C2;P61205;Q8BSL7;P84078;P61750 Arf5;Arf3;Arf4;Arf2;Arf1 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1;ADP-ribosylation factor 4 no no 0 0 1 0 9 0 1 70.151 70.151 3 0.014683 22748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.79 35.464 79.044 0 60.193 0 0 59.696 74 0 56 0 0 56 1 0 1 0 0 1 3006 9893 1834;1693;1833;1700 9533 23087 26688 26688 125 1 ILMVGLDAAGK Unmodified 1086.6107 0.61071622 1693;1833;1834;1700 P84084;D3YV25;E9Q2C2;P61205;Q8BSL7;P84078;P61750 Arf5;Arf3;Arf4;Arf2;Arf1 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1;ADP-ribosylation factor 4 no no 0 0 0 0 10.8 1.48 1 1 1 1 76.821 76.821 2;3 4.7141E-10 29172 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.66 81.93 355.48 489.98 510.36 504.9 536.65 540.6 334 481 513 499 547 518 4 5 4 5 4 5 171630 9894 1834;1693;1833;1700 9533 23088;23089;23090;23091 26689;26690;26691;26692;26693;26694 26694 6 ILMWTELIR Unmodified 1173.658 0.65800077 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 7.6 5.43 2 1 1 1 92.017 92.017 2 8.957E-06 25883 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.63 103.31 726.06 422.31 321.21 460.24 178.71 563.94 680 447 316 433 180 532 7 8 6 8 6 5 96369 9895 2614 9534 23092;23093;23094;23095;23096 26695;26696;26697;26698;26699;26700;26701;26702;26703;26704 26702 10 ILNAGAWSR Unmodified 986.52976 0.52976379 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 11 0 1 59.262 59.262 2 0.031992 15360 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.153 22.059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9896 823 9535 23097 26705 26705 1 ILNENPEENLFVVHQAIK Unmodified 2106.111 0.11095402 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 6.5 0.5 1 1 73.15 73.15 3 1.5217E-07 26273 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.013 55.378 40.595 59.584 30.091 29.552 93.303 76.222 38 56 28 28 93 74 1 1 1 1 2 2 11854 9897 2045 9536 23098;23099 26706;26707 26706 2 ILNGRPPLGFLNPR Deamidation (N) 1563.8885 0.88854606 1288 O89023 Tpp1 Tripeptidyl-peptidase 1 yes yes 0 1 0 1 10.5 0.5 1 1 72.657 72.657 3 0.00068452 21193 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.858 59.248 108.55 123.25 145.64 282.45 127.61 105.09 102 125 149 278 130 102 1 2 2 3 1 1 44237 9898 1288 9537 23100;23101 26708;26709;26710 26709 350 3 ILNILTNK Unmodified 927.57532 0.57531699 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 6.5 5.5 1 1 75.996 75.996 2;3 0.0028547 20066 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.212 39.054 217.22 130.41 169.84 43.528 63.014 185.82 204 139 167 46 65 176 2 2 2 1 1 2 23348 9899 3165 9538 23102;23103 26711;26712 26712 2 ILNPEEIEK Unmodified 1083.5812 0.58119023 3399 Q9Z2U0 Psma7 Proteasome subunit alpha type-7 yes yes 0 0 0 0 9 4 1 1 63.878 63.878 2 0.0015909 22744 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.943 38.792 69.745 0 0 69.331 91.144 85.877 65 0 0 65 93 83 1 0 0 1 1 1 9811.3 9900 3399 9539 23104;23105 26713;26714 26713 2 ILNSFSVMPSPK Oxidation (M);Deamidation (N) 1335.6744 0.67443869 647 CON__ENSEMBL:ENSBTAP00000025008;A2AQ07 Tubb1 Tubulin beta-1 chain yes no 0 1 1 0 11 0 1 68.2 68.2 3 0.012845 19067 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.88 9.1987 0 78.736 0 80.882 0 0 0 74 0 74 0 0 0 1 0 1 0 0 13720 + 9901 647 9540 23106 26715 26715 187 29 1 ILPESSILFLCDLQEK Unmodified 1903.9965 0.99650111 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 95.58 95.58 3 1.3898E-11 34513 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.33 83.38 39.48 67.131 83.562 84.415 51.853 108.09 37 65 83 80 51 102 2 2 3 2 2 3 19221 9902 1840 9541 23107;23108;23109;23110 26716;26717;26718;26719 26717 4 ILPNKVDPLVSLMMVEK Unmodified 1925.073 0.072977294 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 1 10 0 1 90.493 90.493 4 0.0030631 29451 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.14 37.015 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 1053.4 9903 1713 9542 23111 26720 26720 1 ILPNVPEVEDSTDFFK Unmodified 1848.9145 0.91454562 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 6 0.816 1 1 1 87.362 87.362 3 2.9763E-05 33358 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.874 66.509 19.272 68.924 0 30.604 19.564 78.326 18 66 0 28 19 74 1 4 0 2 1 3 12376 9904 2633 9543 23112;23113;23114 26721;26722;26723;26724 26721 4 ILPNYHHLK Unmodified 1133.6346 0.63456321 780 D3Z6H3;Q9WUB4;D3Z4E5 Dctn6 Dynactin subunit 6 yes no 0 0 0 0 10 0 1 46.573 46.573 3 0.019355 10322 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.715 18.343 83.699 86.208 106.52 82.149 118.13 105.36 79 88 107 83 120 102 1 1 1 1 1 1 6405.3 9905 780 9544 23115 26725 26725 1 ILPQPQGAPVSTTVAK Unmodified 1605.909 0.90900673 95 A0A0G2JFB0;D3YXR8;Q80U40 Rimbp2 RIMS-binding protein 2 yes no 0 0 0 0 8 0 1 62.83 62.83 3 0.0033293 19895 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.14 23.094 60.088 0 0 0 45.451 77.587 56 0 0 0 46 74 1 0 0 0 1 1 3383 9906 95 9545 23116 26726 26726 1 ILPTLEAVAALGNK Unmodified 1408.829 0.8289655 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 11.2 0.829 1 1 2 91.771 91.771 2;3 1.9279E-09 29461 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.03 93.305 0 226.56 198.98 247.44 264.21 29.09 0 216 196 233 264 28 0 4 4 3 3 1 49890 9907 2991 9546 23117;23118;23119;23120 26727;26728;26729;26730;26731;26732 26730 6 ILPVQAIR Unmodified 908.58074 0.58073672 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 10 0 1 61.822 61.822 2 0.015616 16757 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.287 53.714 59.21 63.601 93.682 63.51 103.77 0 56 65 93 65 102 0 1 1 1 1 1 0 14747 9908 3373 9547 23121 26733 26733 1 ILPVQAIRPGYHYICLR Unmodified 2068.1404 0.14042043 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 1 1 0 1 65.879 65.879 4 0.00036833 22065 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.598 33.041 39.613 17.545 0 50.877 26.281 19.504 37 19 0 47 28 19 1 1 0 1 1 1 5301.3 9909 3373 9548 23122 26734 26734 1 ILQAGFK Unmodified 775.45922 0.4592246 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 10.5 0.5 1 1 61.256 61.256 2 0.017579 16708 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.36 61.859 0 115.81 137.17 234.07 142.35 173.96 0 111 139 232 148 167 0 1 1 2 1 1 39713 9910 2115 9549 23123;23124 26735;26736 26735 2 ILQAIQLLPK Unmodified 1135.7329 0.73288027 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R235;K4DI73 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 6.67 5.68 3 2 1 87.027 87.027 2;3 3.7178E-37 32205 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 160.88 126.63 397.45 290.37 370.99 354.25 312.03 409.18 373 288 358 341 316 390 7 8 6 9 7 9 116640 9911 3447 9550 23125;23126;23127;23128;23129;23130 26737;26738;26739;26740;26741;26742;26743;26744;26745;26746;26747;26748;26749;26750 26746 14 ILQAVEFPFLVR Unmodified 1430.8286 0.82857157 1793 P68181;H6TMF5;A0A0G2JFT9 Prkacb cAMP-dependent protein kinase catalytic subunit beta yes no 0 0 0 0 11.6 1.02 1 1 2 1 94.759 94.759 2;3 0.00010586 37863 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.442 48.074 58.471 27.776 15.1 30.604 0 39.442 56 28 14 28 0 37 3 1 1 1 0 1 31236 9912 1793 9551 23131;23132;23133;23134;23135 26751;26752;26753;26754;26755 26755 5 ILQAVNFPFLVK Unmodified 1387.8228 0.82275791 1310 P05132 Prkaca cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 0 0 6.75 5.76 2 1 1 94.902 94.902 3 2.4935E-13 33590 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.22 71.534 34.069 108.43 97.819 91.414 79.769 16.397 32 105 98 88 79 16 3 6 5 5 4 2 35589 9913 1310 9552 23136;23137;23138;23139 26756;26757;26758;26759;26760;26761;26762;26763 26760 8 ILQDGGLQVVEK Unmodified 1297.7242 0.72416608 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 6.5 0.5 1 1 68.602 68.602 2;3 8.8844E-08 23316 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.79 52.812 89.954 35.328 0 0 134.36 47.142 84 37 0 0 130 46 2 1 0 0 2 1 13837 9914 2138 9553 23140;23141 26764;26765 26765 2 ILQDIASGR Unmodified 971.53999 0.53999412 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 7 0 1 62.556 62.556 2 0.0088464 20348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.85 35.054 48.62 134.18 51.812 136.59 128.07 47.512 46 130 56 130 130 46 1 2 1 2 2 1 21548 9915 2736 9554 23142 26766;26767 26766 2 ILQDSLGGNCR Unmodified 1231.5979 0.5979197 1481;2139;1507 P28738;A2ARD4;Q61768;E9QAK5;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5A no no 0 0 0 0 7.5 0.5 1 1 54.39 54.39 2 0.0030055 15884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.944 44.69 48.968 66.48 26.418 39.261 37.121 77.825 46 66 28 38 37 74 1 2 1 2 1 2 6648.8 9916 1481;2139;1507 9555 23143;23144 26768;26769 26769 2 ILQEGVDPK Unmodified 997.54441 0.5444108 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 5.5 0.5 1 1 56.251 56.251 2;3 0.0017954 18974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.465 43.24 48.731 124.39 0 39.925 102.22 76.75 46 120 0 37 102 74 1 1 0 1 2 1 6909.6 9917 2435 9556 23145;23146 26770;26771 26770 2 ILQEHEQIK Unmodified 1136.619 0.61897272 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 6 0 1 46.659 46.659 3 0.0047555 13763 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.398 38.162 69.745 0 0 40.441 0 88.478 65 0 0 37 0 83 1 0 0 1 0 1 3735.5 9918 1438 9557 23147 26772 26772 1 ILQESGLK Unmodified 886.51238 0.51238239 864 E9PZC3;Q923D2;E9PZC4 Blvrb Flavin reductase (NADPH) yes no 0 0 0 0 8 0 1 58.482 58.482 3 0.0219 17893 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.432 14.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9919 864 9558 23148 26773 26773 1 ILQEYITQEGHK Unmodified 1457.7514 0.75144346 1524 P35585;D3YZ71 Ap1m1 AP-1 complex subunit mu-1 yes no 0 0 0 0 7.5 0.5 1 1 61.021 61.021 3 0.009155 19802 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.298 29.459 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9920 1524 9559 23149;23150 26774;26775 26774 2 ILQEYQVQYTPQGDSDDGK Unmodified 2183.0019 0.0018570786 789 D3Z7P3;D3Z7P4;F7B327 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 5 0 1 67.261 67.261 3 0.0023873 24054 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.912 32.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9921 789 9560 23151 26776 26776 1 ILQGAPETLDR Unmodified 1211.651 0.65100113 2415 Q8BIW1 Prune Protein prune homolog yes yes 0 0 0 0 5.5 0.5 1 1 57.478 57.478 2 0.0030496 18876 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.533 40.53 78.866 63.231 36.539 38.263 0 69.29 74 65 37 37 0 65 2 2 1 1 0 2 5203.7 9922 2415 9561 23152;23153 26777;26778 26778 2 ILQGGVGIPHIR Unmodified 1258.751 0.75098995 834 H7BXB1;E9Q4G7;E9PWB2;Q8BK63;E9Q2U6;E9Q3W1 Csnk1a1 Casein kinase I isoform alpha yes no 0 0 0 0 10 0 1 59.653 59.653 3 7.2001E-05 15921 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.463 63.143 30.044 0 0 30.604 0 49.036 28 0 0 28 0 46 1 0 0 1 0 1 3558.7 9923 834 9562 23154 26779 26779 1 ILQGLVEGVTYPACHGIWSK Unmodified 2227.146 0.14595932 1944 Q3TXX4;A0A1B0GRU0;A0A0R4J0A6;Q8BLE7 Slc17a7;Slc17a6 Vesicular glutamate transporter 1;Vesicular glutamate transporter 2 yes no 0 0 0 0 11 0 1 85.786 85.786 3 6.4743E-07 27146 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.522 52.879 23 0 0 0 0 0 23 0 0 0 0 0 1 0 0 0 0 0 3902.2 9924 1944 9563 23155 26780 26780 1 ILQIAESYLVVSDK Unmodified 1576.8712 0.87122424 2478 Q8BYA0 Tbcd Tubulin-specific chaperone D yes yes 0 0 0 0 9 0 1 94.485 94.485 3 0.0017695 33744 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.377 38.176 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1162.3 9925 2478 9564 23156 26781 26781 1 ILQLGPPGTK Unmodified 1022.6124 0.61243078 3449;3452 S4R2F3;S4R1J9;S4R2T7 Ank2 no no 0 0 0 0 11.2 1.6 1 1 1 2 65.361 65.361 2;3 3.7927E-05 18359 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.27 83.716 157.86 204.62 311.74 281 250.64 202.04 148 204 315 268 250 194 3 4 4 4 3 3 83314 9926 3449;3452 9565 23157;23158;23159;23160;23161 26782;26783;26784;26785;26786;26787 26783 6 ILQNIQVFDFTFSPEEMK Unmodified 2185.0765 0.076542347 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 0 8.5 0.5 1 1 99.206 99.206 3 2.3017E-07 35429 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.502 87.163 6.3758 12.338 0 13.116 0 9.594 6 12 0 12 0 9 1 1 0 1 0 1 7150.4 9927 3214 9566 23162;23163 26788;26789 26788 2 ILQSSSEVGYDAMLGDFVNMVEK Unmodified 2531.1924 0.19237674 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.2 3.12 1 2 2 100.68 100.68 3;4 4.4462E-13 36622 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.177 64.249 52.255 14.699 49.514 53.67 17.356 51.739 49 15 49 52 18 49 3 2 3 3 2 3 10691 9928 1766 9567 23164;23165;23166;23167;23168 26790;26791;26792;26793;26794 26791 5 ILQSTAGK Unmodified 816.47052 0.47051757 338 Q9WVL0;A0A1Y7VJZ2;A0A1Y7VNC1 Gstz1 Maleylacetoacetate isomerase yes no 0 0 0 0 9 0 1 48.438 48.438 2 0.020165 12338 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.149 22.027 0 48.944 0 79.544 71.111 76.855 0 46 0 74 74 74 0 1 0 1 1 1 9584.9 9929 338 9568 23169 26795 26795 1 ILQVSFK Unmodified 833.50109 0.50108942 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 69.198 69.198 2 0.025835 17470 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.15 31.728 93.802 84.056 104.48 111.49 0 123.66 88 79 97 102 0 116 1 1 1 1 0 1 47010 9930 1812 9569 23170;23171 26796;26797 26797 2 ILREEGPSAFWK Unmodified 1431.751 0.75104953 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 9 0 1 65.627 65.627 3 0.0036622 20432 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.975 38.418 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 14740 9931 2396 9570 23172 26798 26798 1 ILSANGEAK Deamidation (N) 902.47091 0.4709115 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 1 0 0 6 0 1 52.114 52.114 2 0.021147 16336 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.688 39.036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9932 1096 9571 23173 26799 26799 287 1 ILSDDTALK Unmodified 974.52843 0.52842638 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 6 0 1 61.361 61.361 2 0.0037311 20722 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.247 38.369 138.46 87.955 99.386 112.3 164.93 133.87 130 93 102 111 167 130 1 1 1 1 1 1 9712.5 9933 1621 9572 23174 26800 26800 1 ILSDDVPIKEYHIDEK Unmodified 1912.9782 0.97820851 1620 Q3TN85;Q8CAP3;P54726 Rad23a UV excision repair protein RAD23 homolog A yes no 0 0 0 1 5 0 1 65.728 65.728 4 0.0010067 23296 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.281 35.496 59.568 34.378 58.229 0 85.547 37.001 56 37 56 0 83 37 1 1 1 0 1 1 2372.5 9934 1620 9573 23175 26801 26801 1 ILSDPSDDTK Unmodified 1089.519 0.51898391 3266 Q9QXS1;E9Q3W4;A0A2I3BRT4;Q8R0W0 Plec;Eppk1 Plectin;Epiplakin yes no 0 0 0 0 5 0 1 53.678 53.678 3 0.03309 17738 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.21 22.968 48.943 25.69 47.984 0 0 0 46 28 46 0 0 0 1 1 1 0 0 0 3268.9 9935 3266 9574 23176 26802 26802 1 ILSDVTHSAVFGVPASK Unmodified 1726.9254 0.92538508 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 8.75 0.829 2 1 1 72.614 72.614 3;4 4.3735E-07 23868 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.771 54.452 168.23 0 115.94 155.53 128.12 224.51 157 0 111 148 130 213 3 0 2 2 2 3 28589 9936 1983 9575 23177;23178;23179;23180 26803;26804;26805;26806 26805 4 ILSFIPPDGNFR Unmodified 1374.7296 0.7295858 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 0 10 0 1 81.853 81.853 3 0.00078058 25748 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.435 39.389 0 0 59.826 17.201 0 0 0 0 56 19 0 0 0 0 1 1 0 0 3154.4 9937 2650 9576 23181 26807 26807 1 ILSFVYPIR Unmodified 1106.6488 0.64881629 2737 Q91VE0 Slc27a4 Long-chain fatty acid transport protein 4 yes yes 0 0 0 0 1 0 1 83.144 83.144 2 0.00036149 29175 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 127.46 82.931 39.29 26.361 46.753 27.818 0 0 37 28 46 28 0 0 1 1 1 1 0 0 5464.3 9938 2737 9577 23182 26808 26808 1 ILSGAGEAR Unmodified 872.47158 0.4715802 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 7 0 1 42.657 42.657 2 0.0060133 11182 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.642 9.1502 168 134.15 144.42 153.16 0 236.65 158 139 148 148 0 222 1 1 1 1 0 1 19729 9939 1042 9578 23183 26809 26809 1 ILSGNFFLLK Unmodified 1150.675 0.67503104 3006 Q9CZN8 Qrsl1 Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial yes yes 0 0 0 0 1 0 1 89.742 89.742 3 0.0034695 32045 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 61.353 26.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9940 3006 9579 23184 26810 26810 1 ILSISADIETIGEILK Unmodified 1713.9764 0.9764176 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;H3BJS9 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 10.2 1.92 1 1 1 1 107.51 107.51 3 1.1769E-05 36747 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.448 57.257 0 5.32 0 0 40.672 34.017 0 5 0 0 40 33 0 1 0 0 2 2 2228.4 9941 613 9580 23185;23186;23187;23188 26811;26812;26813;26814 26811 4 ILSISADIETIGEILKK Unmodified 1842.0714 0.071380614 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;H3BJS9 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1 11.7 1.25 1 1 1 100.59 100.59 4 1.0768E-06 40662 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.534 78.072 0 57.212 14.588 79.118 35.678 62.942 0 54 14 73 37 60 0 4 1 3 1 2 4494.6 9942 613 9581 23189;23190;23191 26815;26816;26817;26818 26817 4 ILSLSEEGSLER Unmodified 1331.6933 0.69325988 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 6 0 1 65.288 65.288 2 0.0061051 22515 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.415 37.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9943 62 9582 23192 26819 26819 1 ILSSCPEIK Unmodified 1045.5478 0.54778161 251 A0A1B0GRP7;Q9Z2Y8;A0A1B0GQY5;A0A1B0GRR5;Q6P8V7 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 7.5 0.5 1 1 59.433 59.433 2 0.0034275 19011 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.601 38.814 39.516 66.495 0 0 85.568 66.848 37 65 0 0 84 65 1 2 0 0 2 2 7019.2 9944 251 9583 23193;23194 26820;26821 26820 2 ILSSDDYGK Unmodified 996.47639 0.47639081 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.5 0.5 1 1 55.881 55.881 2 0.0022093 17308 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.034 64.504 297.45 231.24 306.66 81.923 311.74 285.32 280 241 301 83 311 276 2 2 2 1 2 2 34798 9945 2148 9584 23195;23196 26822;26823 26823 2 ILSSTASK Unmodified 805.45453 0.45453316 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 10.2 1.57 1 1 2 1 1 47.659 47.659 2 0.0012219 10782 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 137.9 63.466 879.37 815.8 722.99 643 524.98 709.9 824 823 714 630 530 680 5 5 5 5 4 5 207240 9946 1557 9585 23197;23198;23199;23200;23201;23202 26824;26825;26826;26827;26828;26829;26830;26831 26827 8 ILSYDEK Unmodified 866.43855 0.43854874 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 8.5 2.69 1 1 1 1 56.309 56.309 2 0.016214 18442 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 39.938 453.04 355.98 380.63 362.1 520.61 498.96 426 362 381 361 530 482 4 3 3 4 4 4 34113 9947 2322 9586 23203;23204;23205;23206 26832;26833;26834;26835 26832 4 ILTDIVWPVIAK Unmodified 1366.8224 0.82242356 3128 Q9DBL7 Coasy Bifunctional coenzyme A synthase;Phosphopantetheine adenylyltransferase;Dephospho-CoA kinase yes yes 0 0 0 0 10.5 0.5 1 1 96.964 96.964 3 0.00037688 31740 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.069 42.852 9 19 0 0 0 0 9 19 0 0 0 0 1 1 0 0 0 0 6896.6 9948 3128 9587 23207;23208 26836;26837;26838 26838 3 ILTDYGFEGHPFR Unmodified 1550.7518 0.75177781 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 66.8 66.8 3 1.1928E-05 23342 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.24 88.021 198.27 56 79.918 251.65 103.11 314.27 185 56 74 231 102 296 3 1 2 3 2 4 86455 9949 3152 9588 23209;23210;23211;23212;23213 26839;26840;26841;26842;26843;26844 26839 6 ILTEAEIDAHLVALAERD Unmodified 1978.0371 0.037120373 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 1 5 0 1 81.589 81.589 3 0.0015213 30860 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.773 31.635 29.794 27.469 18.76 0 27.961 38.644 28 28 19 0 28 37 1 1 1 0 1 1 3780.3 9950 3256 9589 23214 26845 26845 1 ILTEEEASPQCQMDR Unmodified 1805.7924 0.79239835 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 3 0 1 54.55 54.55 3 0.013853 18785 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.857 28.572 29.904 27.776 0 0 17.475 69.857 28 28 0 0 19 66 1 1 0 0 1 1 2425.3 9951 3193 9590 23215 26846 26846 1 ILTFDQLALESPK Unmodified 1473.8079 0.80789571 245 A0A1B0GSF7;A0A1B0GSS8;A0A1B0GQU8;P35980 Rpl18 60S ribosomal protein L18 yes no 0 0 0 0 9 0 1 83.403 83.403 3 0.00010026 28822 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.554 60.168 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 4139 9952 245 9591 23216 26847 26847 1 ILTFQGTK Unmodified 906.51747 0.51746776 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 11.3 1.25 1 1 1 62.19 62.19 2 0.0074134 17191 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.52 58.454 265.05 410.32 290.52 122.94 361.45 365.37 250 407 291 120 353 348 2 3 2 1 2 2 91320 9953 331 9592 23217;23218;23219 26848;26849;26850 26848 3 ILTGSSEPEAAPAPR Unmodified 1494.7678 0.7678218 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 8 3.56 1 1 1 50.877 50.877 2 3.8953E-58 15860 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 202.65 161.23 39.29 29.792 68.991 74.662 170.21 0 37 28 65 75 166 0 1 1 1 3 3 0 19376 9954 3268 9593 23220;23221;23222 26851;26852;26853 26852 3 ILTHSELAPLR Unmodified 1248.719 0.71902112 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 8 0 1 54.047 54.047 3 0.00051799 15739 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.342 54.592 48.968 35.472 35.567 46.95 64.212 47.204 46 37 37 46 65 46 1 1 1 1 1 1 11470 9955 1817 9594 23223 26854 26854 1 ILTHVYPIR Unmodified 1110.655 0.6549643 2082 Q60714 Slc27a1 Long-chain fatty acid transport protein 1 yes yes 0 0 0 0 11 0 1 54.234 54.234 3 0.0044645 13224 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.582 42.027 0 0 0 89.567 61.226 77.137 0 0 0 83 65 74 0 0 0 1 1 1 6976.7 9956 2082 9595 23224 26855 26855 1 ILTSANTLYQVIANR Unmodified 1675.9257 0.92571943 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 12 0 1 83.991 83.991 2 0.02481 23313 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 45.433 17.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9957 331 9596 23225 26856 26856 1 ILTSLYALGTSK Unmodified 1265.7231 0.72310344 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 1 0 2 83.799 83.799 2;3 0.00019034 29467 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.124 59.26 29.824 8.9279 29.395 17.947 56.782 28.228 28 9 28 19 56 28 2 1 1 1 1 1 2756.7 9958 902 9597 23226;23227 26857;26858 26858 2 ILTTGFSR Unmodified 893.49707 0.49706667 1289 O89053;G3UYK8;A0A0U1RPY8 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 11 1.41 1 1 1 1 1 57.099 57.099 2 1.9607E-32 14808 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 198.92 150.82 993.23 964.47 1109.9 1187.8 809.07 1201.3 935 985 1118 1156 843 1147 3 4 4 4 3 4 321690 9959 1289 9598 23228;23229;23230;23231;23232 26859;26860;26861;26862;26863;26864 26860 6 ILTVEDHYYEGGIGEAVSAAVVGEPGVTVTR Unmodified 3187.6037 0.60372317 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 5.33 0.471 2 1 81.742 81.742 3;4 1.0035E-32 30222 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.3 89.106 29.923 76.945 49.519 9 27.941 59.466 28 75 47 9 28 56 1 3 2 1 2 2 15906 9960 1537 9599 23233;23234;23235 26865;26866;26867;26868;26869 26868 5 ILVADSLSLLK Unmodified 1170.7224 0.72237516 2049 Q5KU39 Vps41 Vacuolar protein sorting-associated protein 41 homolog yes yes 0 0 0 0 11 0 1 86.929 86.929 3 0.0033106 27645 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.785 25.37 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1433.5 9961 2049 9600 23236 26870 26870 1 ILVAGDSMDSVK Unmodified 1233.6275 0.6274885 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 9.33 2.62 1 1 1 65.447 65.447 2;3 9.9671E-05 23615 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.658 62.46 69.608 105.86 0 139.6 161.33 202.2 65 102 0 130 167 194 2 2 0 2 3 3 15054 9962 1400 9601 23237;23238;23239 26871;26872;26873 26873 3 ILVAGDTMDSVK Unmodified 1247.6431 0.64313856 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8 0 1 66.721 66.721 2 0.002853 21798 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.056 36.657 29.732 17.583 37.566 28.365 0 0 28 19 37 28 0 0 1 1 1 1 0 0 2842.6 9963 1401 9602 23240 26874 26874 1 ILVATNLFGR Unmodified 1102.6499 0.64987892 3379 Q9Z1N5;Q8VDW0 Ddx39b;Ddx39a Spliceosome RNA helicase Ddx39b;ATP-dependent RNA helicase DDX39A yes no 0 0 0 0 7 6 1 1 77.285 77.285 2 6.2815E-05 26986 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.08 61.766 69.745 96.934 120.74 153 83.174 99.138 65 93 120 148 83 93 1 1 1 2 1 1 16630 9964 3379 9603 23241;23242 26875;26876 26875 2 ILVAVVK Unmodified 740.51601 0.5160112 3097 Q9D8W5;B1AT36;Q3TRH2 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 12 0 1 67.472 67.472 2 0.027116 16809 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.093 23.06 372.02 260.21 373.24 385.82 444.9 417.97 350 274 377 381 456 404 1 1 1 1 1 1 21645 9965 3097 9604 23243 26877 26877 1 ILVDQVTGVSR Unmodified 1185.6717 0.67173657 436 Q61701;A2A9S2;A2A9S0;Q8BVA9;A2A9R6;A2A9R8;A2A9S3 Elavl4 ELAV-like protein 4;ELAV-like protein yes no 0 0 0 0 8 0 1 62.233 62.233 2 0.0015772 19611 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.652 30.054 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9966 436 9605 23244 26878 26878 1 ILVDVEK Unmodified 814.48002 0.48001963 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 10 3 1 1 63.238 63.238 2 0.025583 20812 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.45 20.854 200.59 105.68 377.78 292.8 320.24 243.23 189 111 368 294 327 234 2 1 3 3 3 2 45899 9967 2555 9606 23245;23246 26879;26880;26881 26879 3 ILVGTNLVR Unmodified 983.61277 0.61276513 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 11 0.816 1 1 1 62.939 62.939 2 0.00061453 16797 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.09 79.663 315.65 162.03 793.76 338.58 229.63 888.89 297 167 758 334 237 840 2 1 3 2 1 3 134970 9968 3174 9607 23247;23248;23249 26882;26883;26884 26883 3 ILVLNTPNNPLGK Deamidation (N) 1392.7977 0.79766537 508 A2AQY8;Q8BTY1 Ccbl1 Kynurenine--oxoglutarate transaminase 1 yes no 0 1 0 0 1 0 1 75.541 75.541 3 0.013452 26034 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.675 33.239 0 8.7734 48.01 27.743 0 0 0 9 46 28 0 0 0 1 1 1 0 0 2148.3 9969 508 9608 23250 26885 26885 131 1 ILVLNTPNNPLGK Unmodified 1391.8136 0.81364979 508 A2AQY8;Q8BTY1 Ccbl1 Kynurenine--oxoglutarate transaminase 1 yes no 0 0 0 0 12 0 1 75.274 75.274 3 7.1282E-05 19861 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.959 72.292 0 0 97.721 65.221 0 49.036 0 0 93 65 0 46 0 0 1 1 0 1 9685 9970 508 9608 23251 26886 26886 1 ILVLTELLEQK Unmodified 1297.7857 0.7857037 2786 Q91ZU1 Asb6 Ankyrin repeat and SOCS box protein 6 yes yes 0 0 0 0 11 0 1 96.994 96.994 3 0.0074094 31708 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.445 29.572 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9971 2786 9609 23252 26887 26887 1 ILVNSITSLVNTFVPSGK Unmodified 1888.067 0.066963938 3342 Q9WV54;D3Z505 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes no 0 0 0 0 13 0 1 105.26 105.26 3 0.00075075 42878 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.848 37.903 9.657 0 0 9.837 0 9.594 9 0 0 9 0 9 1 0 0 1 0 1 854.35 9972 3342 9610 23253 26888 26888 1 ILVNSQYTASVFK Unmodified 1468.7926 0.79257999 3121 Q9DBE8;F6RBY3 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes no 0 0 0 0 10.7 0.471 1 2 73.324 73.324 2;3 5.747E-11 21544 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.33 90.072 0 127.68 23.829 23.719 106.69 0 0 120 23 23 102 0 0 1 1 1 1 0 20454 9973 3121 9611 23254;23255;23256 26889;26890;26891 26891 3 ILVPALMVTAEK Unmodified 1283.7523 0.75229508 1511 P34914;A8JYK8 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 0 0 0 11.5 0.5 1 1 84.132 84.132 3 0.013257 23384 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 45.433 29.179 99.12 53.81 66.753 0 0 118.33 93 56 65 0 0 111 2 1 1 0 0 2 5824.6 9974 1511 9612 23257;23258 26892;26893 26893 2 ILVPEGTR Unmodified 883.51272 0.51271674 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes no 0 0 0 0 7 0.816 1 1 1 51.04 51.04 2 5.2902E-07 15036 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.86 65.555 540.38 106.13 521.01 366.12 326.45 500.23 507 111 505 369 336 478 2 1 2 2 1 2 77469 9975 2433 9613 23259;23260;23261 26894;26895;26896 26895 3 ILVPIQQVLK Unmodified 1149.7485 0.74853033 2431 Q8BM72 Hspa13 Heat shock 70 kDa protein 13 yes yes 0 0 0 0 11.5 0.5 1 1 80.96 80.96 2 6.17E-05 25059 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.66 64.541 0 39.368 0 0 0 85.442 0 37 0 0 0 83 0 1 0 0 0 2 7544.2 9976 2431 9614 23262;23263 26897;26898 26897 2 ILVPVEVIKPITLK Unmodified 1561.0219 0.021851647 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 1 8.33 5.19 1 2 84.122 84.122 3;4 6.5937E-07 23167 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.44 110.44 89.049 116.88 207.86 0 152.06 49.583 84 117 199 0 147 47 2 2 3 0 3 1 29545 9977 2317 9615 23264;23265;23266 26899;26900;26901 26900 3 ILVTGGSGLVGR Unmodified 1127.6663 0.66625727 388 A0A2R8W6N0;A0A2R8VKL9;A0A2R8VHD0;A0A2R8W6P6;A0A2R8VI39;P23591 Tsta3 GDP-L-fucose synthase yes no 0 0 0 0 11 0 1 61.355 61.355 2 3.2438E-08 16193 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.51 74.971 0 98.952 0 59.492 91.23 96.535 0 93 0 56 93 93 0 1 0 1 1 1 9692.9 9978 388 9616 23267 26902 26902 1 ILVTSNDSR Unmodified 1003.5298 0.52982336 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 7.5 0.5 1 1 45.342 45.342 2 0.021714 12494 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.88 27.949 39.564 27.124 0 29.743 45.769 28.542 37 28 0 28 46 28 1 1 0 1 1 1 2208 9979 2204 9617 23268;23269 26903;26904 26903 2 ILVVHLK Unmodified 820.55346 0.55345934 57 A0A0A6YW28;P35123;A0A0A6YW63;A0A0A6YWM7 Usp4 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 4 yes no 0 0 0 0 12 0 1 59.389 59.389 3 0.022417 13878 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.842 12.803 60.088 0 0 0 0 39.442 56 0 0 0 0 37 1 0 0 0 0 1 5180.7 9980 57 9618 23270 26905 26905 1 ILVVVLQEK Unmodified 1039.6641 0.664132 578 B1AR74;Q8CCN5;Q0VF62 Bcas3 Breast carcinoma-amplified sequence 3 homolog yes no 0 0 0 0 11 0 1 80.981 80.981 2 0.016682 25021 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.016 20.949 0 0 70.33 0 0 88.478 0 0 65 0 0 83 0 0 1 0 0 1 2923.1 9981 578 9619 23271 26906 26906 1 ILYEYLAEASVVFPK Unmodified 1740.9338 0.9338245 1885 Q04690 Nf1 Neurofibromin no no 0 0 0 0 10 0 1 102.15 102.15 3 0.00028169 33076 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.533 36.474 0 13.62 12.655 13.337 6.2395 13.68 0 13 13 13 7 13 0 1 1 1 1 1 795.92 9982 1885 9620 23272 26907 26907 1 ILYRPDGQHDGK Unmodified 1397.7052 0.70516197 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 8 1 1 1 41.685 41.685 4 0.00031341 10766 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.088 51.101 383.24 395.04 536.88 415.79 250.64 448.03 362 404 537 414 258 427 2 2 2 2 1 2 26703 9983 1362 9621 23273;23274 26908;26909 26908 2 ILYSQCGDVMR Unmodified 1340.6217 0.62169161 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5 Myl6 Myosin light polypeptide 6 yes no 0 0 0 0 8 0 1 57.414 57.414 2 0.0029783 17368 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.197 48.599 0 19.566 38.86 0 0 0 0 19 37 0 0 0 0 1 1 0 0 0 3817 9984 316 9622 23275 26910 26910 1 ILYTWTPGTLLHYGR Unmodified 1789.9515 0.95154025 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 5.6 5.64 3 1 1 81.905 81.905 3 1.0138E-07 27831 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.42 89.518 39.5 101.01 96.27 133.26 37.343 98.879 37 98 97 127 37 93 3 4 3 4 3 3 32294 9985 927 9623 23276;23277;23278;23279;23280 26911;26912;26913;26914;26915;26916;26917;26918 26911 8 IMAPVYFILGGK Unmodified 1307.7312 0.73116571 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 13 0 1 97.336 97.336 3 0.00018893 39116 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.379 58.599 0 0 0 30.256 18.484 0 0 0 0 28 19 0 0 0 0 1 1 0 866.92 9986 3342 9624 23281 26919 26919 1 IMDCVGCFK Unmodified 1128.4766 0.47660728 2637 Q8R180;A0A2I3BPM1 Ero1l ERO1-like protein alpha yes no 0 0 0 0 13 0 1 26.756 26.756 4 0.052156 5086 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.148 13.489 231.81 416.35 0 0 449.78 0 218 406 0 0 430 0 1 1 0 0 1 0 3326.8 9987 2637 9625 23282 26920 26920 1 IMDPNIVGNEHYDVAR Unmodified 1841.873 0.87303193 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 7 3.16 1 1 1 1 1 58.833 58.833 3 1.2805E-38 20332 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 159.83 141.81 541.87 387.81 472.75 366.23 452.02 312.76 509 398 471 362 453 296 5 5 5 3 4 3 305280 9988 1642 9626 23283;23284;23285;23286;23287 26921;26922;26923;26924;26925;26926 26922 6 IMDPNIVGNEHYDVAR Deamidation (N) 1842.857 0.85704752 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 1 0 0 4 0 1 60.967 60.967 3 0.00086428 21488 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.337 44.504 0 39.368 0 0 0 39.442 0 37 0 0 0 37 0 1 0 0 0 1 3852.3 9989 1642 9626 23288 26927 26927 627 1 IMDYSLLLGVHNIDQQER Unmodified 2143.0732 0.073188303 1044 F8WHW6;O70161;F7C0X9 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 8 0 1 78.421 78.421 3 4.7483E-07 27291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.385 78.593 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 4862.5 9990 1044 9627 23289 26928 26928 1 IMEGPAFNFLDAPAVR Unmodified 1746.8763 0.8763264 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 85.936 85.936 2;3 1.3516E-11 33619 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.52 96.032 78.492 26.005 78.208 0 75.098 76.741 75 28 74 0 74 74 3 1 2 0 1 2 27560 9991 3016 9628 23290;23291;23292 26929;26930;26931 26931 3 IMEVIDAITTTAQSHQR Unmodified 1912.9677 0.9676606 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 11.3 0.471 2 1 84.753 84.753 3;4 1.8104E-05 26593 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.613 56.2 0 68.673 29.112 0 0 59.696 0 65 28 0 0 56 0 2 1 0 0 1 21274 9992 1357 9629 23293;23294;23295 26932;26933;26934 26932 3 IMEYYEK Unmodified 974.44192 0.44191956 1597 P50518;A0A0N4SW07;A0A0N4SW34;A0A0N4SWA3 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 0 8.67 3.09 1 1 1 60.086 60.086 2;3 0.020993 20901 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.95 52.781 538.64 163.67 403.76 435.71 369.06 518.2 505 176 401 427 388 496 3 2 2 2 2 3 43337 9993 1597 9630 23296;23297;23298 26935;26936;26937 26937 3 IMGPNYTPGKK Unmodified 1204.6274 0.62742892 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 1 11 0 1 49.459 49.459 3 0.0033132 11397 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.537 28.649 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 7324.4 9994 1652 9631 23299 26938 26938 1 IMGVAGGLTNLSK Unmodified 1259.6908 0.69075746 2522 Q8CCF0 Prpf31 U4/U6 small nuclear ribonucleoprotein Prp31 yes yes 0 0 0 0 11 0 1 71.558 71.558 3 0.00086603 20803 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.924 31.493 39.464 0 39.835 0 36.358 68.253 37 0 37 0 37 65 1 0 1 0 1 1 2885.7 9995 2522 9632 23300 26939 26939 1 IMHDVIK Unmodified 854.46841 0.46840908 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9.67 2.49 1 1 1 50.026 50.026 3 0.0053339 15183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.906 20.994 426.13 0 584.16 464.44 478.14 502.3 400 0 561 465 494 484 2 0 3 3 3 3 52251 9996 1160 9633 23301;23302;23303 26940;26941;26942 26940 3 IMHDVIKK Unmodified 982.56337 0.5633721 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 9 0 1 49.82 49.82 4 0.0092363 13009 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.565 44.471 210.3 119.77 261.26 192.33 162.17 228.83 198 130 257 193 171 219 1 1 1 1 1 1 14765 9997 1160 9634 23304 26943 26943 1 IMHQTVK Unmodified 855.46366 0.46365805 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 12 0 1 37.509 37.509 3 0.044518 5715 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.966 17.228 0 15.96 0 0 15.009 19.826 0 15 0 0 15 19 0 1 0 0 1 1 677.38 9998 1055 9635 23305 26944 26944 1 IMLNVSEVTQK Deamidation (N) 1261.6588 0.65878863 3429 yes no 0 1 0 0 11 0 1 58.517 58.517 3 0.025635 15041 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.092 10.105 109.45 0 0 108.66 150.43 134.29 102 0 0 102 153 130 1 0 0 1 1 1 17049 + 9999 3429 9636 23306 26945 26945 1151 1 IMLPWDPSGK Unmodified 1142.5794 0.57941609 1755 P62908 Rps3 40S ribosomal protein S3 yes yes 0 0 0 0 10 0 1 81.217 81.217 2 0.013249 25603 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.78 32.306 39.701 0 0 0 56.251 67.685 37 0 0 0 56 65 1 0 0 0 1 1 5168.4 10000 1755 9637 23307 26946 26946 1 IMNTFSVMPSPK Unmodified 1350.6676 0.66757917 2283;2975;2805 Q7TMM9;Q922F4;Q9CWF2 Tubb2a;Tubb6;Tubb2b Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain no no 0 0 0 0 10.1 3.48 1 1 2 1 2 2 73.745 73.745 2;3;4 1.8886E-26 21575 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 172.13 134.41 1000.7 660.72 1176.3 842.44 869.82 1804.4 938 657 1139 816 887 1716 10 8 10 7 7 13 547650 10001 2283;2805;2975 9638 23308;23309;23310;23311;23312;23313;23314;23315;23316 26947;26948;26949;26950;26951;26952;26953;26954;26955;26956;26957;26958;26959;26960;26961 26953 15 IMNTFSVMPSPK Oxidation (M) 1366.6625 0.6624938 2283;2975;2805 Q7TMM9;Q922F4;Q9CWF2 Tubb2a;Tubb6;Tubb2b Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain no no 0 0 1 0 10.3 1.25 1 1 1 68.727 68.727 3 0.0040073 20386 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.32 36.763 49.358 57.685 113.58 162.6 184.9 95.979 46 56 112 157 185 93 1 2 2 3 3 2 21000 10002 2283;2805;2975 9638 23317;23318;23319 26962;26963;26964;26965 26964 172;173 4 IMNTFSVMPSPK Deamidation (N) 1351.6516 0.65159476 2283;2975;2805 Q7TMM9;Q922F4;Q9CWF2 Tubb2a;Tubb6;Tubb2b Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain no no 0 1 0 0 9 0 1 75.705 75.705 3 0.0034715 25233 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.157 35.302 0 0 0 0 36.688 58.649 0 0 0 0 37 56 0 0 0 0 1 1 9661.9 10003 2283;2805;2975 9638 23320 26966 26966 901 1 IMNTFSVVPSPK Unmodified 1318.6955 0.69550848 1795;1863;3072;3183 P99024;P68372;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 9.64 3.73 2 2 2 3 3 2 72.887 72.887 2;3;4 2.0963E-22 18739 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 162.93 111.96 4186.9 2971.2 4676.1 3550.9 4227 4675.5 3937 3114 4623 3537 4323 4493 13 14 11 14 12 14 2291600 10004 1863;1795;3072;3183 9639 23321;23322;23323;23324;23325;23326;23327;23328;23329;23330;23331;23332;23333;23334 26967;26968;26969;26970;26971;26972;26973;26974;26975;26976;26977;26978;26979;26980;26981;26982;26983;26984;26985;26986;26987 26981 21 IMNTFSVVPSPK Deamidation (N) 1319.6795 0.67952407 1795;1863;3072;3183 P99024;P68372;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 0 10 2.16 2 2 2 75.219 75.219 2;3 4.1383E-06 25596 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.87 74.808 236.42 251.31 243.11 112.18 364.07 295.61 222 255 241 112 361 282 3 5 4 2 4 4 57381 10005 1863;1795;3072;3183 9639 23335;23336;23337;23338;23339;23340 26988;26989;26990;26991;26992;26993 26988 720 6 IMNTFSVVPSPK Oxidation (M) 1334.6904 0.69042311 1795;1863;3072;3183 P99024;P68372;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 0 10.6 1.11 1 3 3 1 66.657 66.657 3 0.00021574 23580 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.554 57.227 922.23 401.14 474.38 474.69 330.2 391.56 864 418 463 454 325 370 10 6 6 6 4 4 95864 10006 1863;1795;3072;3183 9639 23341;23342;23343;23344;23345;23346;23347;23348 26994;26995;26996;26997;26998;26999;27000;27001;27002;27003;27004;27005 27005 148 12 IMNVIGEPIDER Unmodified 1384.7021 0.70205043 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 7.67 2.56 1 1 2 1 1 69.683 69.683 2;3 2.5295E-20 25323 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.71 110.25 325.42 394.04 654.67 394.95 553.93 489.84 306 398 643 399 563 469 4 5 5 4 6 2 217080 10007 1642 9640 23349;23350;23351;23352;23353;23354 27006;27007;27008;27009;27010;27011 27006 6 IMQVIAMSK Unmodified 1019.5508 0.5507585 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 1 0 1 74.766 74.766 2 0.0025102 25640 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.692 55.9 0 0 49.772 0 36.358 68.253 0 0 46 0 37 65 0 0 1 0 1 1 2969.3 10008 107 9641 23355 27012 27012 1 IMRPDDANVAGNVHGGTILK Unmodified 2077.0739 0.073857005 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 9.33 2.62 1 1 1 54.113 54.113 4 1.2365E-10 16652 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.5 75.061 514.47 385.48 670.61 520.64 586.29 742.26 485 393 665 523 598 712 4 3 4 4 3 4 42541 10009 852 9642 23356;23357;23358 27013;27014;27015;27016 27013 4 IMSIPNLR Unmodified 942.53207 0.53207197 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 10 0 1 65.742 65.742 2 0.044011 18507 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.073 28.12 69.468 54.9 0 48.864 75.159 0 65 56 0 46 74 0 1 1 0 1 1 0 7097.7 10010 2520 9643 23359 27017 27017 1 IMSIVDPNR Unmodified 1043.5434 0.54336494 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 8 0 1 64.248 64.248 2 0.022891 20553 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.464 38.671 0 59.584 0 0 0 138.58 0 56 0 0 0 130 0 1 0 0 0 1 6982.3 10011 418 9644 23360 27018 27018 1 IMVLGANWK Unmodified 1030.5634 0.5633721 2824 Q99J08 Sec14l2 SEC14-like protein 2 yes yes 0 0 0 0 1 0 1 75.792 75.792 2 0.0012831 26082 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.91 57.778 20.121 12.975 33.744 0 33.472 0 19 14 32 0 32 0 1 1 1 0 1 0 3619.7 10012 2824 9645 23361 27019 27019 1 IMVVGSTINDVLAVNTPK Unmodified 1870.0234 0.023384564 2275 Q78JW9 Ubfd1 Ubiquitin domain-containing protein UBFD1 yes yes 0 0 0 0 11 0 1 86.716 86.716 3 1.8446E-05 27481 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.902 48.827 20.076 27.962 28.517 0 0 0 19 28 28 0 0 0 1 1 1 0 0 0 2274.8 10013 2275 9646 23362 27020 27020 1 IMYSHLVDYFPEYDGPQR Unmodified 2229.0201 0.0200901 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 8 0 1 75.177 75.177 3 0.008389 25830 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.501 23.102 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 5648.9 10014 1428 9647 23363 27021 27021 1 INAAEIESR Unmodified 1001.5142 0.5141733 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 4.5 0.5 1 1 47.026 47.026 2 0.0097977 14803 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.652 24.848 129.06 113.16 154.17 105.31 157.78 115.97 121 111 149 102 157 111 2 2 2 2 2 2 11099 10015 1512 9648 23364;23365 27022;27023;27024 27022 3 INAANIATDDER Unmodified 1301.6212 0.62115757 1376 P14231;I7HIF3 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes no 0 0 0 0 4 1 1 1 48.576 48.576 2 3.0154E-06 15973 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.911 62.056 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10016 1376 9649 23366;23367 27025;27026 27025 2 INAANIATDDERDK Unmodified 1544.7431 0.74306362 1376 P14231;I7HIF3 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes no 0 0 0 1 7 3.54 1 1 1 1 47.688 47.688 3 3.2321E-16 14887 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.52 93.455 426.82 189.74 731.61 347.89 255.22 348.91 401 204 703 352 250 330 3 2 4 3 2 2 79943 10017 1376 9650 23368;23369;23370;23371 27027;27028;27029;27030 27030 4 INAANIATDDERDK Deamidation (N) 1545.7271 0.7270792 1376 P14231;I7HIF3 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes no 0 1 0 1 4 0 1 50.194 50.194 3 0.0040704 16371 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.774 28.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10018 1376 9650 23372 27031 27031 443 1 INAFNWAK Unmodified 962.4974 0.49740102 1030 F8VPU2 Farp1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes yes 0 0 0 0 11 0 1 69.193 69.193 2 0.042225 19691 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.799 15.921 0 0 0 178.22 229.26 0 0 0 0 167 227 0 0 0 0 1 1 0 23631 10019 1030 9651 23373 27032 27032 1 INAGMYILSPAVLQR Unmodified 1644.9021 0.90214722 2458 Q8BTZ7 Gmppb Mannose-1-phosphate guanyltransferase beta yes yes 0 0 0 0 12 0 1 81.187 81.187 2 0.00096313 22328 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.069 49.801 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1399.9 10020 2458 9652 23374 27033 27033 1 INALTAASEAACLIVSVDETIK Unmodified 2288.1934 0.19336302 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 8 0 1 110.05 110.05 4 0.0095338 36965 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.703 17.938 9.657 0 0 9.837 0 9.594 9 0 0 9 0 9 1 0 0 1 0 1 840.88 10021 1822 9653 23375 27034 27034 1 INALTAASEAACLIVSVDETIKNPR Unmodified 2655.3902 0.39016535 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 1 8.5 0.5 1 1 102.6 102.6 4 2.9465E-07 36307 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.881 44.738 5.365 0 9.3245 18.95 8.9699 0 5 0 9 18 9 0 1 0 1 2 1 0 3749.1 10022 1822 9654 23376;23377 27035;27036 27036 2 INAVVETGR Unmodified 957.52434 0.52434406 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 46.868 46.868 2 1.1797E-11 14049 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 132.84 53.129 222.03 300.12 316.7 119.77 397.22 182.27 213 297 315 120 391 176 2 2 2 1 2 1 57851 10023 2148 9655 23378;23379;23380;23381 27037;27038;27039;27040 27037 4 INCPVYITK Unmodified 1106.5794 0.57941609 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 10 1.63 1 2 1 1 1 59.083 59.083 2;3 0.00059189 15631 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.73 75.307 275.66 273.22 402.65 310.71 395.53 533.44 259 274 397 301 404 511 3 4 5 4 4 5 195780 10024 1850;2212 9656 23382;23383;23384;23385;23386;23387 27041;27042;27043;27044;27045;27046 27044 6 INCVAAVFSAPPFPAAIGSQK Unmodified 2144.1088 0.10884553 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 6.25 5.26 4 2 2 88.331 88.331 3;4 4.0506E-15 32127 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.665 69.174 117.59 209.26 76.196 123.7 51.972 68.911 111 204 74 116 51 65 4 5 3 4 2 2 126260 10025 814 9657 23388;23389;23390;23391;23392;23393;23394;23395 27047;27048;27049;27050;27051;27052;27053;27054;27055;27056 27050 10 INDAVANEDGPQVVTGR Unmodified 1753.8595 0.85949036 854 Q6ZPQ6;E9PYJ7 Pitpnm2 Membrane-associated phosphatidylinositol transfer protein 2 yes no 0 0 0 0 4 0 1 54.391 54.391 3 0.0033767 18376 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.237 24.38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10026 854 9658 23396 27057 27057 1 INDEIER Unmodified 887.43486 0.43486035 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 2 0 1 41.778 41.778 2 0.026915 12634 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.921 11.849 0 38.421 56.657 36.576 25.949 48.296 0 37 56 37 28 46 0 1 1 1 1 1 12313 10027 1428 9659 23397 27058 27058 1 INEAIVAVQAIIADPK Unmodified 1663.9509 0.95087155 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 10 0.816 1 1 1 95.559 95.559 3 0.00051087 31013 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.525 46.671 20.313 44.082 17.934 38.176 27.739 42.914 19 43 19 38 28 41 1 2 1 2 1 2 19733 10028 2924 9660 23398;23399;23400 27059;27060;27061 27061 3 INEGLEHLAK Unmodified 1122.6033 0.60332266 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7.75 3.11 1 1 1 1 53.211 53.211 3 0.00064721 17704 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.171 58.32 839.46 669.78 974.13 792.92 1012.8 1001.9 790 698 974 796 1036 967 3 4 4 4 4 4 85903 10029 775 9661 23401;23402;23403;23404 27062;27063;27064;27065 27062 4 INENTGSVSVTR Unmodified 1275.6419 0.64189301 3323 Q9WTR5 Cdh13 Cadherin-13 yes yes 0 0 0 0 5.5 0.5 1 1 42.424 42.424 2 0.011368 12310 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.899 9.2936 9.3426 28.685 47.528 0 0 39.442 9 28 47 0 0 37 1 1 2 0 0 1 5705.3 10030 3323 9662 23405;23406 27066;27067 27066 2 INESDPEYLR Unmodified 1234.583 0.58298115 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 6.67 4.5 1 1 1 50.442 50.442 2;3 0.00027823 17041 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.24 46.373 49.026 125.44 0 0 93.965 175.34 46 121 0 0 93 167 1 2 0 0 1 2 21135 10031 3274 9663 23407;23408;23409 27068;27069;27070 27068 3 INETDTFGPGDDDEIQFDDIGDDDEDIDDI Unmodified 3357.3328 0.33282502 2094 Q8BMJ3;Q60872 Eif1ax;Eif1a Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A yes no 0 0 0 0 1 0 1 97.295 97.295 4 0.015745 33588 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 28.223 27.725 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 1124 10032 2094 9664 23410 27071 27071 1 INEWLTLVEK Unmodified 1243.6812 0.68123863 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 1.87 1 1 1 1 88.361 88.361 2;3 3.5063E-05 34721 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.338 49.587 19.192 0 39.461 28 0 20.254 18 0 38 28 0 19 1 0 2 1 0 1 11236 10033 3204 9665 23411;23412;23413;23414 27072;27073;27074;27075 27075 4 INFDSNSAYR Unmodified 1185.5415 0.54145068 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 52.11 52.11 2 5.9703E-07 15619 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.51 100.55 375.15 327.56 150.99 227.26 106.87 303.96 352 334 153 218 111 288 3 3 1 2 1 2 55992 10034 3397 9666 23415;23416;23417 27076;27077;27078 27076 3 INFVIDNNK Unmodified 1075.5662 0.56620887 2566 Q8JZN2;Q91W50;A0A0G2JF72;A0A0G2JE62 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 9 0 1 65.904 65.904 2 0.024925 20709 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.353 31.88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10035 2566 9667 23418 27079 27079 1 INHFPEDTDYDHDSAEYLLR Unmodified 2449.0822 0.082232665 1025 F7CZ64;Q8VHW2 Cacng8 Voltage-dependent calcium channel gamma subunit;Voltage-dependent calcium channel gamma-8 subunit yes no 0 0 0 0 3.5 0.5 1 1 62.507 62.507 4 0.00070341 22451 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.729 32.773 20.244 28.427 0 40.441 0 57.848 19 28 0 37 0 56 1 1 0 1 0 2 6714.5 10036 1025 9668 23419;23420 27080;27081 27080 2 INISEGNCPER Unmodified 1287.5877 0.58774895 1668;394;1647 P60335;Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHI3;P57722;E9Q7D8 Pcbp1;Pcbp2;Pcbp3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 0 7 3.54 1 1 1 1 44.537 44.537 2 6.0641E-08 13367 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.03 65.939 186.67 109.33 273.62 198.71 64.086 49.036 176 111 268 194 65 46 4 2 4 3 1 1 43482 10037 1668;394;1647 9669 23421;23422;23423;23424 27082;27083;27084;27085 27083 4 INLIAPPR Unmodified 892.54944 0.54943659 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 10 0 1 59.813 59.813 2 0.01068 15930 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.51 55.008 87.866 80.171 132.59 63.142 0 99.138 83 83 130 65 0 93 1 1 1 1 0 1 15859 10038 2269 9670 23425 27086 27086 1 INLPIQTFSALNFR Unmodified 1632.8988 0.8987764 1493 P31001 Des Desmin yes yes 0 0 0 0 12 0 1 88.35 88.35 2 0.025402 25138 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.288 26.316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10039 1493 9671 23426 27087 27087 1 INLVILGK Unmodified 868.57459 0.57458871 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 12 0 1 76.23 76.23 2 0.0093549 20300 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.45 66.373 78.984 82.986 0 109.64 98.017 105.94 74 83 0 102 102 102 1 1 0 1 1 1 7764.7 10040 2773 9672 23427 27088 27088 1 INLWHLEITDR Unmodified 1408.7463 0.7462985 2211 Q6P1F6;Q9CWU3;Q925E7;F6RV17 Ppp2r2a;Ppp2r2d Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 0 0 8.5 0.5 1 1 70.462 70.462 3 3.663E-08 23577 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.03 71.316 78.784 67.157 46.922 58.411 0 88.478 74 65 46 56 0 83 2 1 1 1 0 2 23650 10041 2211 9673 23428;23429 27089;27090 27089 2 INMCGLTTK Unmodified 1036.5045 0.50453659 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 11.5 1.5 1 1 59.759 59.759 2 0.0019441 20812 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.25 60.244 196.8 122 182.57 208.54 188.85 191.82 185 130 185 204 196 185 1 1 1 1 1 1 23434 10042 1311 9674 23430;23431 27091;27092 27092 2 INMLTAGYAER Unmodified 1237.6125 0.61250714 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 8 0 1 62.513 62.513 2 0.063112 19770 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.701 19.783 29.597 46.349 35.867 27.762 37.427 0 28 46 37 28 37 0 1 1 1 1 1 0 1779.2 10043 2339 9675 23432 27093 27093 1 INNACFEAVVVTNTIPQEDK Unmodified 2261.0998 0.099796984 1064 G3UXL2;Q9D7G0 Prps1l3;Prps1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 0 6 0 1 75.158 75.158 4 3.6353E-07 27168 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.874 50.751 0 0 0 0 75.794 46.873 0 0 0 0 74 46 0 0 0 0 1 1 3707.9 10044 1064 9676 23433 27094 27094 1 INNACFEAVVVTNTIPQEDK Deamidation (N) 2262.0838 0.083812569 1064 G3UXL2;Q9D7G0 Prps1l3;Prps1 Ribose-phosphate pyrophosphokinase 1 yes no 0 1 0 0 13 0 1 74.884 74.884 3 0.0018689 28345 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.578 32.117 29.742 0 50.704 0 48.116 0 28 0 47 0 46 0 1 0 1 0 1 0 4132.3 10045 1064 9676 23434 27095 27095 282 1 INNITCDSFK Unmodified 1210.5652 0.56522259 2386 Q8BGT8;F7D3N3;F6U6Z2;E0CXW9 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 13 0 1 59.657 59.657 2 0.014375 20999 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.598 25.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10046 2386 9677 23435 27096 27096 1 INNVPAEGENEVNNELANR Unmodified 2094.993 0.99302373 2800 Q921M7;A0A2I3BRN5 Fam49b Protein FAM49B yes no 0 0 0 0 3 1 1 1 57.658 57.658 3 3.9623E-10 19621 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 109.03 91.537 0 28.245 28.909 39.656 8.2249 9.3593 0 27 28 38 9 9 0 2 1 2 1 1 15620 10047 2800 9678 23436;23437 27097;27098 27097 2 INNVPAEGENEVNNELANR Deamidation (N) 2095.977 0.97703931 2800 Q921M7;A0A2I3BRN5 Fam49b Protein FAM49B yes no 0 1 0 0 2.33 0.471 2 1 59.772 59.772 3 4.4932E-07 21197 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.668 70.788 0 0 51.821 40.481 8.727 39.193 0 0 51 38 9 37 0 0 3 1 1 2 13932 10048 2800 9678 23438;23439;23440 27099;27100;27101 27101 998;999 3 INPASMFDVHVK Unmodified 1356.686 0.68600643 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 8.5 0.5 1 1 69.065 69.065 3 4.0003E-12 22169 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.92 74.287 69.57 141.08 127.05 162.26 249.46 164.09 65 139 130 158 251 158 1 2 1 1 2 1 34722 10049 2555 9679 23441;23442 27102;27103 27103 2 INPENSK Unmodified 800.40283 0.40283194 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 6 0 1 39.502 39.502 2 0.037979 10451 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.906 4.0521 0 38.575 47.458 0 48.116 0 0 37 46 0 46 0 0 1 1 0 1 0 2129.6 10050 1207 9680 23443 27104 27104 1 INPQKLPSLK Unmodified 1136.6917 0.69174374 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 1 11 0 1 58.178 58.178 3 0.032585 14861 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.841 39.265 0 0 160.14 0 0 142.84 0 0 148 0 0 134 0 0 1 0 0 1 8287 10051 2650 9681 23444 27105 27105 1 INPVEFNPEFVAR Unmodified 1530.7831 0.78307794 2685 Q8VCR4;Q9DCG9 Trmt112 Multifunctional methyltransferase subunit TRM112-like protein yes no 0 0 0 0 6.5 0.5 1 1 73.852 73.852 2 0.0040851 25774 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.624 13.584 20.046 47.304 17.226 8.8103 0 0 19 46 19 9 0 0 1 1 1 1 0 0 2085.2 10052 2685 9682 23445;23446 27106;27107 27107 2 INQDPQVMLAPLISIALK Unmodified 1963.1176 0.1176193 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 11 1.41 1 1 1 1 1 102.34 102.34 3 3.7777E-07 28832 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.871 58.796 79.247 15.518 27.88 64.428 87.318 106.71 74 19 26 61 89 103 2 1 2 3 4 6 24953 10053 3022 9683 23447;23448;23449;23450;23451 27108;27109;27110;27111;27112;27113;27114 27113 7 INQTVEILK Unmodified 1056.6179 0.61791009 410;3398 A0A338P6R8;A0A338P769;A0A338P755;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 8 0.816 1 1 1 64.495 64.495 2 0.00087675 19950 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.71 59.217 256.24 228.9 362.56 204.75 218.46 369 241 231 353 204 223 352 3 3 3 2 2 4 67146 10054 410;3398 9684 23452;23453;23454 27115;27116;27117;27118 27117 4 INSANGLEIK Deamidation (N) 1058.5608 0.56078914 13 Q3TYE5;A0A087WP80;Q8BLK3;F6SB80;A0A087WP70 Lsamp Limbic system-associated membrane protein yes no 0 1 0 0 8.67 3.09 1 1 1 59.455 59.455 2 0.0017405 19962 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.08 39.604 305.52 281.94 169.24 288.51 337.87 222.99 287 287 167 278 343 213 3 3 1 2 3 1 35548 10055 13 9685 23455;23456;23457 27119;27120;27121 27119 1 3 INSCFSANTVEQIIENLR Deamidation (N) 2108.0208 0.020818382 2621 Q8QZS1;E0CX19 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 1 0 0 9 0 1 95.379 95.379 3 0.00048153 34124 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.19 32.097 0 19.751 27.822 28.946 0 39.442 0 19 28 28 0 37 0 1 1 1 0 1 690.54 10056 2621 9686 23458 27122 27122 953 1 INSITVDNCK Unmodified 1162.5652 0.56522259 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 53.269 53.269 3 0.00095927 16081 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.927 42.395 197.83 161.74 156.04 94.584 163.39 202.14 186 167 158 93 167 194 2 2 2 1 2 2 16624 10057 1536 9687 23459;23460;23461 27123;27124;27125 27123 3 INSLSPK Unmodified 757.4334 0.43340378 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8 0 1 49.958 49.958 2 0.058455 13899 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.301 23.423 78.393 92.138 91.426 73.545 100.37 85.614 74 93 93 74 102 83 1 1 1 1 1 1 4704.1 10058 3210 9688 23462 27126 27126 1 INSVLDIVAK Unmodified 1070.6336 0.63356015 2551 Q8CHX7 Rftn2 Raftlin-2 yes yes 0 0 0 0 9 0 1 79.075 79.075 2 0.0065013 26936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.107 29.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10059 2551 9689 23463 27127 27127 1 INTILEQVVILGK Unmodified 1438.8759 0.87591569 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 11 0.816 1 1 1 94.755 94.755 3 9.9534E-05 27135 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.078 55.447 39.522 58.158 115.4 46.929 0 0 37 56 112 46 0 0 1 2 3 1 0 0 11070 10060 565 9690 23464;23465;23466 27128;27129;27130 27130 3 INVCVGQK Unmodified 916.48004 0.4800364 2519 Q8CBE3;H3BJB3 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 8.5 0.5 1 1 52.017 52.017 2 0.0056003 14858 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.01 53.727 69.049 63.447 63.257 65.502 94.269 0 65 65 65 65 93 0 1 1 1 1 1 0 7630.1 10061 2519 9691 23467;23468 27131;27132 27131 2 INVLAAQYQSLLNSYGEPVDDKSATLLQLITK Unmodified 3504.8716 0.87156518 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 11 0 2 103.91 103.91 4;5 0.00042773 34466 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.689 32.314 0 0 6.2164 20.188 0 3.198 0 0 6 20 0 3 0 0 1 2 0 1 8499.5 10062 815;2590 9692 23469;23470 27133;27134 27134 2 INVLPLGSGAIAGNPLGVDR Unmodified 1932.0793 0.079259959 803 E0CY49;Q91YI0 Asl Argininosuccinate lyase yes no 0 0 0 0 10 0 1 82.987 82.987 3 0.00030691 26388 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.497 37.582 20.207 0 30.194 0 29.288 0 19 0 28 0 28 0 1 0 1 0 1 0 4483.1 10063 803 9693 23471 27135 27135 1 INVLVLEAR Unmodified 1025.6233 0.62332982 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 9 0 1 70.158 70.158 2 0.039157 22720 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.246 31.644 0 0 80.068 0 56.251 67.685 0 0 74 0 56 65 0 0 1 0 1 1 7420.3 10064 2168 9694 23472 27136 27136 1 INVNEIFYDLVR Unmodified 1493.7878 0.78782897 79 A0A0G2JDL9;Q99JI6;P62835;A0A1W2P777 Rap1b;Rap1a Ras-related protein Rap-1b;Ras-related protein Rap-1A yes no 0 0 0 0 10 2.16 1 1 1 94.831 94.831 2 5.9154E-13 34275 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.16 97.413 30.044 69.16 30.296 0 0 118.33 28 65 28 0 0 111 1 1 1 0 0 3 25138 10065 79 9695 23473;23474;23475 27137;27138;27139 27137 3 INVPVPQFGGGDPADIIHDFQR Unmodified 2391.1971 0.19714326 2742 Q91VK4;A0A087WRM2 Itm2c Integral membrane protein 2C;CT-BRI3 yes no 0 0 0 0 7 0 1 85.222 85.222 3 0.0018588 31109 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.267 24.84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10066 2742 9696 23476 27140 27140 1 INVYYNEAAGNK Unmodified 1354.6517 0.65172941 2283 Q7TMM9 Tubb2a Tubulin beta-2A chain yes yes 0 0 0 0 8.25 2.95 1 3 3 2 2 2 1 2 57.558 57.558 2;3;4 3.5578E-40 18977 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 196.11 145.51 2516.8 1981.8 1999.7 2067 2108.7 2239.5 2365 2027 1993 2014 2119 2140 20 16 18 17 15 14 1589500 10067 2283 9697 23477;23478;23479;23480;23481;23482;23483;23484;23485;23486;23487;23488;23489;23490;23491;23492 27141;27142;27143;27144;27145;27146;27147;27148;27149;27150;27151;27152;27153;27154;27155;27156;27157;27158;27159;27160;27161;27162;27163 27145 23 INVYYNEAAGNK Deamidation (N) 1355.6357 0.635745 2283 Q7TMM9 Tubb2a Tubulin beta-2A chain yes yes 0 1 0 0 7.2 2.99 2 1 1 1 59.812 59.812 2;3 1.9339E-13 20031 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.63 90.535 143.1 134.56 102.11 145.27 86.176 43.923 134 130 102 138 88 42 3 3 3 3 3 1 25299 10068 2283 9697 23493;23494;23495;23496;23497 27164;27165;27166;27167;27168 27166 902;903;904 5 INVYYNEAAGNKYVPR Deamidation (N) 1870.9214 0.92136233 2283 Q7TMM9 Tubb2a Tubulin beta-2A chain yes yes 0 1 0 1 7 0 1 60.289 60.289 3 0.0057929 19415 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.026 32.187 29.667 17.403 48.578 0 0 0 28 19 46 0 0 0 1 1 1 0 0 0 4008.3 10069 2283 9698 23498 27169 27169 902;903;904 1 INVYYNEATGGK Deamidation (N) 1328.6248 0.62484596 1795 P68372 Tubb4b Tubulin beta-4B chain yes yes 0 1 0 0 6.25 0.829 1 1 2 59.641 59.641 2;3 6.006E-11 19379 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.12 82.248 0 0 118.02 46.767 94.139 28.833 0 0 111 46 93 28 0 0 2 1 2 1 6876.7 10070 1795 9699 23499;23500;23501;23502 27170;27171;27172;27173 27171 721 4 INVYYNEATGGK Unmodified 1327.6408 0.64083038 1795 P68372 Tubb4b Tubulin beta-4B chain yes yes 0 0 0 0 9.12 2.42 1 1 2 2 2 59.767 59.767 2;3;4 8.3311E-27 18541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 176.42 131.44 1073.6 999.64 1012.6 666.68 1214.8 1239.8 1009 1012 1008 660 1221 1189 9 8 9 6 9 8 637700 10071 1795 9699 23503;23504;23505;23506;23507;23508;23509;23510 27174;27175;27176;27177;27178;27179;27180;27181;27182;27183;27184 27178 11 INVYYNEATGGNYVPR Unmodified 1828.8744 0.87441214 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 0 0 7.43 3.33 1 1 1 2 1 1 64.343 64.343 2;3 2.0346E-45 21231 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 171.46 145.74 562.12 343.49 506.97 272.74 367.32 482.57 528 353 492 268 371 462 8 7 7 6 7 7 444180 10072 3072 9700 23511;23512;23513;23514;23515;23516;23517 27185;27186;27187;27188;27189;27190;27191;27192;27193;27194 27188 10 INVYYNEATGGNYVPR Deamidation (N) 1829.8584 0.85842773 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 1 0 0 7 2.77 2 2 1 1 65.411 65.411 3 3.2862E-08 21778 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.38 95.148 150.75 201.03 209.24 156.52 237.63 221.36 142 201 203 155 239 213 3 4 3 4 4 4 36091 10073 3072 9700 23518;23519;23520;23521;23522;23523 27195;27196;27197;27198;27199;27200 27197 1065 6 INVYYNEATGNK Unmodified 1384.6623 0.6622941 2975 Q9CWF2 Tubb2b Tubulin beta-2B chain yes yes 0 0 0 0 8.5 2.69 1 1 1 1 58.663 58.663 2;3 5.5189E-09 20270 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.72 54.08 354.08 243.64 516.9 197.11 263.59 354.98 334 250 501 194 252 333 4 3 4 2 2 2 115890 10074 2975 9701 23524;23525;23526;23527 27201;27202;27203;27204;27205 27205 5 INYTENR Unmodified 908.43519 0.4351947 1316 P06745;A0A0U1RQ72 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 8.67 3.09 1 1 1 37.13 37.13 2 0.02111 9308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.81 59.926 545.74 344.9 137.91 433.93 176.12 558.89 511 359 139 407 180 529 3 2 1 2 2 3 127420 10075 1316 9702 23528;23529;23530 27206;27207;27208 27206 3 IPAAVPVGK Unmodified 850.52764 0.52763852 3092 Q9D8B7 Jam3 Junctional adhesion molecule C yes yes 0 0 0 0 9 0 1 57.74 57.74 3 0.01725 16811 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.607 33.831 0 0 47.171 58.397 0 78.884 0 0 46 56 0 74 0 0 1 1 0 1 2964.6 10076 3092 9703 23531 27209 27209 1 IPADQGIAGHVATTGQILNIPDAYAHPLFYR Deamidation (N) 3319.699 0.69896096 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 1 0 0 8 0 1 77.842 77.842 5 1.2224E-05 27065 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.501 35.322 0 0 0 60.577 33.573 68.332 0 0 0 56 37 65 0 0 0 1 1 1 3580.9 10077 2054 9704 23532 27210 27210 803 1 IPADQGIAGHVATTGQILNIPDAYAHPLFYR Unmodified 3318.7149 0.71494538 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 9 0 1 77.684 77.684 4 6.3064E-06 26239 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.671 36.433 0 0 0 0 38.044 19.168 0 0 0 0 37 19 0 0 0 0 1 1 5790.5 10078 2054 9704 23533 27211 27211 1 IPAEVLILNSIVLPHK Unmodified 1755.0658 0.065841726 2807 Q922H4 Gmppa Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 0 11 0 1 91.654 91.654 4 0.0022053 29383 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.532 29.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1806.3 10079 2807 9705 23534 27212 27212 1 IPAFLNVVDIAGLVK Unmodified 1567.9338 0.93376492 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 8.71 4.92 2 2 2 1 103.31 103.31 2;3;4 1.4952E-23 34356 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.85 120.98 147.36 104.17 271.7 111.14 123.16 187.19 138 104 266 111 121 176 7 6 8 7 6 6 64604 10080 2999 9706 23535;23536;23537;23538;23539;23540;23541 27213;27214;27215;27216;27217;27218;27219;27220;27221;27222;27223;27224;27225;27226;27227 27215 15 IPAGEDYSLK Unmodified 1091.5499 0.5498901 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 6 0 1 58.993 58.993 3 0.0014893 19603 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.056 40.313 49.134 0 37.684 47.192 44.637 38.168 46 0 37 46 46 37 1 0 1 1 1 1 5500.9 10081 2983 9707 23542 27228 27228 1 IPAGLCATAIDILTTVVR Unmodified 1883.055 0.055019043 957 E9QKZ2;Q91YE6 Ipo9 Importin-9 yes no 0 0 0 0 11.5 0.5 1 1 107.02 107.02 3 0.00039705 35180 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.831 39.925 0 0 14 14 0 0 0 0 14 14 0 0 0 0 1 1 0 0 2464 10082 957 9708 23543;23544 27229;27230 27229 2 IPAMTIAK Unmodified 843.48881 0.48881017 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 11.2 1.17 2 1 1 1 62.929 62.929 2;3 0.0052881 16832 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.127 27.06 489.04 295.57 332.1 184.16 472.9 512.04 459 314 327 185 477 493 4 4 3 2 4 4 100750 10083 1766 9709 23545;23546;23547;23548;23549 27231;27232;27233;27234;27235 27233 5 IPANWTNPLGK Unmodified 1209.6506 0.6506072 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 11.5 0.5 1 1 73.016 73.016 2 2.6404E-08 21378 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.16 68.638 20.319 67.79 0 40.441 0 84.214 19 65 0 37 0 79 1 2 0 1 0 1 16518 10084 2178 9710 23550;23551 27236;27237 27236 2 IPATEDTPEVEGDVPELYHQR Unmodified 2394.1339 0.13393388 1113 H3BIY2;Q6ZPU9;E0CXJ9 2510003E04Rik;Kbp KIF1-binding protein yes no 0 0 0 0 2.5 0.5 1 1 62.814 62.814 3 5.2338E-09 22463 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.301 67.369 9.657 9.576 0 0 18.867 38.904 9 9 0 0 19 37 1 1 0 0 1 2 6804.2 10085 1113 9711 23552;23553 27238;27239 27239 2 IPAVVVEK Unmodified 853.5273 0.52730417 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 8 0 1 62.26 62.26 3 0.03789 19625 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.082 12.829 49.358 0 0 59.252 103.97 0 46 0 0 56 102 0 1 0 0 1 1 0 3585.2 10086 2646 9712 23554 27240 27240 1 IPCLIVAAK Unmodified 983.58377 0.58377319 2372 Q8BG51;F7ASU3 Rhot1 Mitochondrial Rho GTPase 1 yes no 0 0 0 0 12 0 1 71.739 71.739 2 0.0049073 18427 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.265 33.919 59.686 24.993 46.316 37.162 27.581 0 56 28 46 37 28 0 1 1 1 1 1 0 5186.7 10087 2372 9713 23555 27241 27241 1 IPCVDAGLISPLVQLLNSK Unmodified 2036.134 0.13399765 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 6.5 5.53 3 1 1 1 105.72 105.72 3;4 7.6666E-20 29250 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.77 103.74 66.083 110.23 57.987 85.467 117.65 8.1251 62 108 57 79 115 8 4 6 4 4 5 2 62729 10088 919;937 9714 23556;23557;23558;23559;23560;23561 27242;27243;27244;27245;27246;27247;27248;27249;27250 27249 9 IPCVDAGLISPLVQLLNSK Deamidation (N) 2037.118 0.11801323 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 1 0 0 9.5 0.5 1 1 104.57 104.57 3 1.1562E-13 33799 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.9 97.097 0 14.657 14.269 0 0 17.924 0 14 14 0 0 17 0 1 1 0 0 2 3456.2 10089 919;937 9714 23562;23563 27251;27252 27252 248 2 IPCVDAGLISPLVQLLNSKDQEVLLQTGR Unmodified 3175.7275 0.7274839 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 1 10 0 1 102.25 102.25 4 0.00080227 33125 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.454 34.674 0 0 0 15.302 0 9.594 0 0 0 14 0 9 0 0 0 1 0 1 1372.4 10090 919;937 9715 23564 27253 27253 1 IPDEELR Unmodified 870.4447 0.44469675 491;2155 A2ALV3;Q62420;Q8BXU5;F6ZL13;Q62419 Sh3gl2;Sh3gl1 Endophilin-A1;Endophilin-A2 no no 0 0 0 0 2.5 0.5 1 1 49.17 49.17 2 0.0095557 16262 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.99 56.995 1231.9 1331.4 1414.8 1205.7 1134.9 1432.3 1162 1351 1431 1197 1185 1374 2 2 2 2 3 3 355040 10091 491;2155 9716 23565;23566 27254;27255;27256 27256 3 IPDEFDSDPILVQQLR Unmodified 1883.9629 0.9628928 3088 Q9D880 Timm50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 0 0 0 0 5 0 1 81.584 81.584 3 0.029216 30918 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.029 21.597 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10092 3088 9717 23567 27257 27257 1 IPDISQK Unmodified 799.44397 0.44396847 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 8 0 1 55.962 55.962 3 0.015972 16696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.268 9.3064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10093 2691;1024 9718 23568 27258 27258 1 IPDWFLNR Unmodified 1059.5502 0.55016488 340 F6YVP7;A0A1Y7VKY1;P62270;S4R1N6 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 9.5 0.5 1 1 78.804 78.804 2 0.0090193 24539 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.33 63.167 236.99 84.044 312.73 53.665 268.99 288.67 223 93 297 56 269 278 2 1 2 1 2 2 42055 10094 340 9719 23569;23570 27259;27260 27260 2 IPEDEIWQPEPESLDVPARPITSTFLER Unmodified 3263.635 0.6350233 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 1 5 0 1 83.624 83.624 4 0.0020039 31801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.637 29.872 9.5672 0 15.1 0 0 14.924 9 0 14 0 0 14 1 0 1 0 0 1 2715.6 10095 2467 9720 23571 27261 27261 1 IPEELEGVR Unmodified 1040.5502 0.55022446 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 4 0 1 58.618 58.618 2 0.022759 20313 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.582 25.423 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 5266.2 10096 240 9721 23572 27262 27262 1 IPEGSAVPATDAAPK Unmodified 1422.7355 0.73545904 431 A2A6U3;Q80UG5 Sept9 Septin-9 yes no 0 0 0 0 5 0 1 54.401 54.401 3 0.0011634 18024 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.403 12.827 29.59 46.328 37.105 0 58.576 0 28 46 37 0 56 0 1 1 1 0 1 0 4239.2 10097 431 9722 23573 27263 27263 1 IPEQILGK Unmodified 896.53312 0.53311783 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 0 11 2 1 1 65.79 65.79 2;3 0.011829 23838 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.853 45.428 316 211.41 272.16 103.8 92.51 197.21 297 223 269 102 93 185 2 2 2 1 1 1 38136 10098 1500 9723 23574;23575 27264;27265 27265 2 IPEQSVLLLHACAHNPTGVDPRPEQWK Unmodified 3091.5662 0.56617265 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 9.25 2.28 1 1 1 1 64.678 64.678 5 4.3582E-21 21818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.339 73.075 758.68 148.26 404.33 505.7 362.98 503.75 710 157 398 490 371 478 5 2 3 4 4 4 129050 10099 1312 9724 23576;23577;23578;23579 27266;27267;27268;27269;27270 27266 5 IPFLESLGLPSPPR Unmodified 1521.8555 0.8555146 935 E9Q8N8 Slc4a4 Anion exchange protein yes yes 0 0 0 0 8.75 4.49 1 2 1 92.051 92.051 2;3 1.0273E-05 29518 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105 91.883 29.923 43.882 83.776 34.976 47.795 82.889 28 42 80 32 46 78 1 2 4 1 2 3 27255 10100 935 9725 23580;23581;23582;23583 27271;27272;27273;27274;27275 27273 5 IPFLLSGTSYK Unmodified 1224.6754 0.67542497 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 5 5.66 2 1 82.402 82.402 3 0.00018731 28782 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.05 73.418 169.08 199.75 208.99 199.08 300.16 240.95 159 195 205 195 297 232 6 7 5 6 8 6 46257 10101 2834 9726 23584;23585;23586 27276;27277;27278;27279;27280;27281;27282;27283;27284 27277 9 IPGGIIEDSCVLR Unmodified 1427.7442 0.74424959 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 6 0 1 70.342 70.342 3 0.055708 24888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.685 4.4702 29.75 27.346 26.316 49.155 34.428 58.714 28 28 28 47 37 56 1 1 1 1 1 1 5251.9 10102 1827 9727 23587 27285 27285 1 IPGLLGVFQK Unmodified 1070.6488 0.64881629 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 0 1 0 2 85.196 85.196 2;3 0.040916 30065 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.157 31.535 29.952 18.196 0 18.837 0 29.848 28 19 0 18 0 28 1 1 0 2 0 1 3637.7 10103 3186 9728 23588;23589 27286;27287 27286 2 IPGLVGK Unmodified 682.43776 0.43776088 3240 Q9JKY7 Cyp2d22 yes yes 0 0 0 0 12 0 1 45.412 45.412 3 0.049253 8528 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.406 9.645 232.49 139.95 301.53 230.14 0 305.94 219 151 297 227 0 287 1 1 1 1 0 1 27904 10104 3240 9729 23590 27288 27288 1 IPHGDPQSLDPPEVSNAK Unmodified 1899.9327 0.9326553 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 4.5 0.5 1 1 54.197 54.197 3 2.6879E-07 17911 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.035 67.35 0 29.792 19 0 49.162 0 0 28 19 0 47 0 0 1 1 0 1 0 7372.7 10105 2322 9730 23591;23592 27289;27290 27290 2 IPHGDPQSLDPPEVSNAK Deamidation (N) 1900.9167 0.91667089 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 1 0 0 4 0 1 55.359 55.359 3 0.00085171 18847 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.565 28.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10106 2322 9730 23593 27291 27291 913 1 IPHGVSGVQDR Unmodified 1163.6047 0.60471964 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 6 0 1 38.332 38.332 3 0.0078986 9820 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.286 23.805 0 39.368 0 69.864 62.792 57.904 0 37 0 65 65 56 0 1 0 1 1 1 11180 10107 3172 9731 23594 27292 27292 1 IPIFSAAGLPHNEIAAQICR Unmodified 2177.1415 0.14154264 1741 P62814;Q91YH6;A0A0U1RNU9 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 9.57 3.7 1 1 1 2 1 1 74.709 74.709 3;4 3.0718E-103 22061 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 210.98 191.91 327.4 203.36 243.2 232.46 160.93 261.91 307 204 234 221 161 250 6 5 5 4 2 5 367090 10108 1741 9732 23595;23596;23597;23598;23599;23600;23601 27293;27294;27295;27296;27297;27298;27299;27300;27301;27302 27300 10 IPIFSAAGLPHNEIAAQICR Deamidation (N) 2178.1256 0.12555822 1741 P62814;Q91YH6;A0A0U1RNU9 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 1 0 0 10 0 1 76.729 76.729 3 0.0016125 23436 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.397 33.848 29.792 17.75 27.352 38.811 0 0 28 19 28 37 0 0 1 1 1 1 0 0 2090.8 10109 1741 9732 23602 27303 27303 676 1 IPILSTFLTAR Unmodified 1230.7336 0.73360855 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 13 0 1 91.976 91.976 2 1.8605E-07 36642 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.08 75.126 78.89 0 86.085 74.593 61.585 86.721 74 0 83 74 65 83 1 0 1 1 1 1 20344 10110 3355 9733 23603 27304 27304 1 IPISLVLR Unmodified 909.60114 0.60113781 2228 Q6P9R2 Oxsr1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 0 12 0 1 76.643 76.643 2 0.012094 20595 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.777 35.272 0 0 46.731 68.26 0 69.29 0 0 46 65 0 65 0 0 1 1 0 1 17506 10111 2228 9734 23604 27305 27305 1 IPLLIGGATTSR Unmodified 1197.7081 0.70812208 554 A6H5Y3 Mtr Methionine synthase yes yes 0 0 0 0 1 0 1 72.176 72.176 2 0.01584 24419 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.549 5.482 0 29.002 47.255 17.434 27.489 29.064 0 28 46 19 28 28 0 1 1 1 1 1 3105.5 10112 554 9735 23605 27306 27306 1 IPLPGPLFDSLPR Unmodified 1420.8078 0.80783613 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;F6R4N2;A0A0R4J0Q2;E9QAD0;A0A0A6YXS5 Inpp4a yes no 0 0 0 0 11.5 1.5 1 1 88.601 88.601 2;3 0.0097103 34998 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.043 19.709 58.657 25.849 38.236 19.674 27.265 58.918 55 28 37 18 28 56 2 1 1 1 1 1 6995.8 10113 677 9736 23606;23607 27307;27308 27308 2 IPLPVSNILWEHCIR Unmodified 1845.9924 0.99235921 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 10 0 1 79.615 79.615 3 0.039574 24822 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 33.697 8.5197 0 0 78.035 45.627 0 0 0 0 74 46 0 0 0 0 1 1 0 0 5759.9 10114 2554 9737 23608 27309 27309 1 IPLSVCFPEYK Unmodified 1351.6846 0.68460945 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 10 0 1 78.824 78.824 3 0.0015024 24441 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.344 50.82 0 59.584 0 48.864 75.159 0 0 56 0 46 74 0 0 1 0 1 1 0 4622.6 10115 1255 9738 23609 27310 27310 1 IPMFIVHK Unmodified 983.56264 0.56264382 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 6.5 5.5 1 1 67.368 67.368 3 0.0034002 16579 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.18 49.609 148.98 0 28.859 128.61 102.11 0 139 0 28 121 102 0 2 0 1 2 1 0 23792 10116 3259 9739 23610;23611 27311;27312 27312 2 IPNFWVTTFVNHPQVSALLGEEDEEALHYLTR Unmodified 3724.8526 0.85256107 537 Q9EQU5;A2BE93;A2BE92 Set Protein SET yes no 0 0 0 0 10 0 1 96.203 96.203 4 1.8767E-14 31533 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.244 57.502 0 0 1.9745 4.2543 0 0 0 0 2 4 0 0 0 0 1 1 0 0 1613 10117 537 9740 23612 27313 27313 1 IPNIYAIGDVVAGPMLAHK Unmodified 1978.071 0.071003459 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 11 1.49 2 2 1 2 2 86.804 86.804 3;4 7.9393E-36 27848 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 147.17 126.52 206.49 79.967 334.67 94.815 57.579 161.22 195 84 319 93 56 152 5 3 8 3 2 5 97925 10118 1164 9741 23613;23614;23615;23616;23617;23618;23619;23620;23621 27314;27315;27316;27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327 27319 14 IPNQFQGSPPAPSDESVK Unmodified 1896.9218 0.92175626 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 0 9.5 3.5 1 1 59.273 59.273 3 1.3617E-07 19873 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.643 64.575 0 48.944 48.594 26.452 94.039 58.918 0 46 46 28 93 56 0 1 1 1 2 1 15038 10119 241 9742 23622;23623 27328;27329 27328 2 IPNQFQGSPPAPSDESVKIEER Unmodified 2424.1921 0.19211747 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 1 5 0 1 58.893 58.893 3 9.2082E-06 20247 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.834 46.546 9.4375 8.4424 29.742 0 0 0 9 9 28 0 0 0 1 1 1 0 0 0 2567.6 10120 241 9743 23624 27330 27330 1 IPPNFEVSHDFAINFDPENPECEEISGVIASYR Unmodified 3791.7414 0.74135564 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 5.5 0.5 1 1 89.703 89.703 4 0.00017098 33664 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.185 28.215 6.3919 9.145 9.738 0 15.586 3.0219 6 9 9 0 15 3 1 1 1 0 2 1 2362.3 10121 3371 9744 23625;23626 27331;27332 27332 2 IPPPLVHSK Unmodified 986.5913 0.59130141 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 49.121 49.121 3 6.8201E-06 11472 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.57 88.964 4033.5 2922.3 4332.9 3597.4 3145.7 4369.3 3803 3030 4308 3522 3196 4183 14 12 14 14 11 14 211890 10122 1490 9745 23627;23628;23629;23630;23631 27333;27334;27335;27336;27337;27338;27339;27340;27341;27342;27343;27344;27345;27346;27347;27348;27349 27341 17 IPQHGQIK Unmodified 919.52395 0.52395013 3409 yes no 0 0 0 0 11 0 1 33.778 33.778 3 0.028736 5611 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.127 7.2122 34.176 31.744 0 40.441 0 39.442 32 32 0 37 0 37 1 1 0 1 0 1 1581.7 + 10123 3409 9746 23632 27350 27350 1 IPQSTLSEFYPR Unmodified 1436.73 0.72997974 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 8.83 2.03 2 1 2 1 70.523 70.523 2;3 2.0963E-22 23566 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.93 123.63 127.98 116.51 256.06 271.17 219.88 252 120 112 251 265 222 241 3 3 5 6 4 4 118980 10124 1741 9747 23633;23634;23635;23636;23637;23638 27351;27352;27353;27354;27355;27356;27357 27353 7 IPQVVTDLLPSLQK Unmodified 1549.9079 0.9079441 2044 Q5DU41 Lrrc8b Volume-regulated anion channel subunit LRRC8B yes yes 0 0 0 0 11 0 1 92.113 92.113 3 0.0069704 29542 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.964 29.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10125 2044 9748 23639 27358 27358 1 IPSAVGYQPTLATDMGTMQER Unmodified 2265.077 0.076953052 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 71.878 71.878 3 2.5398E-11 26793 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.889 89.635 20.178 146.47 76.213 89.933 109.28 194.09 19 140 74 84 111 185 1 4 3 2 2 4 101850 10126 1642 9749 23640;23641;23642;23643 27359;27360;27361;27362;27363 27363 5 IPSHAVVAR Unmodified 948.5505 0.55049923 2797 Q921I1;E9Q035;CON__Q2HJF0 Tf;Gm20425 Serotransferrin yes no 0 0 0 0 8.5 0.5 1 1 35.795 35.795 3 0.00046309 7074 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.358 53.706 59.523 111.91 130.67 66.693 84.851 166.01 56 111 130 65 83 158 1 2 2 1 1 2 19541 10127 2797 9750 23644;23645 27364;27365 27365 2 IPSISTHIK Unmodified 994.58113 0.58113065 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 9 0 1 53.374 53.374 3 0.0001718 14692 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.75 67.587 177.23 162.53 191.75 192.96 0 210 167 167 195 187 0 197 1 1 1 1 0 1 15703 10128 1415 9751 23646 27366 27366 1 IPSVFSGSDIVQWLIK Unmodified 1787.9822 0.98217168 2333 Q80XD3;A0A0A6YW36;O54829 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 11.5 0.5 1 1 104.26 104.26 2;3 2.9637E-05 34458 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.673 65.345 5.365 0 0 7.651 0 19 5 0 0 7 0 19 1 0 0 1 0 1 19421 10129 2333 9752 23647;23648 27367;27368 27367 2 IPSVVTGTDIVQWLMK Unmodified 1785.9699 0.96989243 11 A0A087WSJ9;A0A087WSH2;A0A087WPW1;F6WDS8;A0A087WQG6;A0A087WNZ9;A0A087WRP8;A0A087WPC4;A0A087WPD1;Q9Z2H2;A0A0J9YUE4;Q3UTM5;A0A0J9YU74;A0A0J9YUY2;A0A0J9YUD1 Rgs6 Regulator of G-protein signaling 6 yes no 0 0 0 0 12 0 1 102.92 102.92 3 0.00015848 28923 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.549 46.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10130 11 9753 23649 27369 27369 1 IPTGQEYAAK Unmodified 1076.5502 0.55022446 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;E9QAJ4;D6RDQ8 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 7.5 0.5 1 1 50.668 50.668 2 0.00048696 14835 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.171 56.462 0 66.971 130.97 103.01 35.893 137.56 0 65 129 102 37 130 0 2 2 2 1 2 12801 10131 103 9754 23650;23651 27370;27371 27370 2 IPTISTQLK Unmodified 999.59645 0.59644637 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 9 0 1 64.02 64.02 3 0.0075075 19863 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.433 26.113 0 0 0 49.219 56.315 0 0 0 0 46 56 0 0 0 0 1 1 0 3929.3 10132 2182 9755 23652 27372 27372 1 IPTPLNTSGVQVICMK Unmodified 1756.9216 0.92156203 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 10.7 1.25 1 2 2 1 76.887 76.887 2;3;4 6.0604E-10 29265 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.777 59.096 108.35 69.055 295.92 284.04 173.81 215.44 102 74 287 279 176 204 1 2 4 5 2 4 73958 10133 1836 9756 23653;23654;23655;23656;23657;23658 27373;27374;27375;27376;27377;27378 27378 6 IPVAFPSGDANSLSK Unmodified 1501.7777 0.77765821 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10 1.87 1 1 1 1 71.268 71.268 3 6.6657E-17 23884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 127.03 94.291 271.21 177.32 73.992 157.37 134.62 214.77 254 185 74 149 134 203 3 3 1 2 2 2 33735 10134 570 9757 23659;23660;23661;23662 27379;27380;27381;27382 27379 4 IPVDTYNNILTVLK Unmodified 1601.9029 0.90285872 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 10.2 0.829 1 1 2 89.594 89.594 2;3 5.8665E-05 28966 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.464 59.308 39.237 19 77.9 84.142 130.83 0 37 19 74 83 130 0 1 1 1 2 3 0 55593 10135 3174 9758 23663;23664;23665;23666 27383;27384;27385;27386;27387 27384 5 IPVFSAFR Unmodified 935.52289 0.52288749 300 A0A1L1SSA0;Q8C522 Endod1 Endonuclease domain-containing 1 protein yes no 0 0 0 0 6.5 5.5 1 1 74.395 74.395 2 0.011297 19344 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.006 56.978 80.297 122.19 86.957 129.84 128.47 145.57 75 120 83 121 130 140 2 3 1 3 2 3 67746 10136 300 9759 23667;23668 27388;27389;27390;27391 27390 4 IPVGPETLGR Unmodified 1037.5869 0.58694431 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 58.528 58.528 2 1.9842E-15 17943 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 175.51 130.9 1583.4 1492.6 2114.3 1137.2 2105.5 2106 1491 1521 2091 1192 2132 2032 4 4 5 5 5 5 525590 10137 1642 9760 23669;23670;23671;23672 27392;27393;27394;27395;27396 27394 5 IPVIIER Unmodified 838.52764 0.52763852 2745;2943 Q91VR7;Q9CQV6 Map1lc3a;Map1lc3b Microtubule-associated proteins 1A/1B light chain 3A;Microtubule-associated proteins 1A/1B light chain 3B no no 0 0 0 0 8 0.816 1 1 1 61.917 61.917 2 0.017375 19555 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.63 26.274 278.94 133.97 564.61 253.79 143.81 510.52 262 129 541 250 148 481 2 2 4 3 2 3 145170 10138 2745;2943 9761 23673;23674;23675 27397;27398;27399;27400 27399 4 IPVLGLTTR Unmodified 968.60187 0.6018661 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 11.5 0.5 1 1 69.134 69.134 2 0.0017075 17450 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.933 56.019 138.18 102.3 133.3 109.01 139 153.5 130 107 134 107 139 144 1 1 1 1 1 1 67685 10139 468 9762 23676;23677 27401;27402 27402 2 IPVPILPGLPMNNHGNYIVR Unmodified 2213.2143 0.21431365 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 12 0 1 79.901 79.901 4 0.00022997 21627 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.993 36.161 30.044 0 0 0 28.291 29.041 28 0 0 0 28 28 1 0 0 0 1 1 3369.6 10140 2244 9763 23678 27403 27403 1 IPVQALLHLR Unmodified 1158.7237 0.72371257 1529 P36916 Gnl1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 0 1 0 1 70.782 70.782 3 0.00071418 23969 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.688 60.134 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 2322.5 10141 1529 9764 23679 27404 27404 1 IPVTDEEQTNVPYIYAIGDILEGK Unmodified 2676.3534 0.35342871 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 6.33 0.471 2 1 100.61 100.61 3;4 5.9621E-07 37245 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.95 36.325 0 0 21.64 0 9.1301 17.861 0 0 20 0 9 17 0 0 2 0 1 2 5266.9 10142 3253 9765 23680;23681;23682 27405;27406;27407 27405 3 IPVTIVTGYLGAGK Unmodified 1387.8075 0.80750177 2711 Q8VEH6 Cbwd1 COBW domain-containing protein 1 yes yes 0 0 0 0 12 0 1 83.133 83.133 3 0.00075602 23114 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.181 23.756 14.829 38.368 0 39.57 46.298 0 14 37 0 37 46 0 1 1 0 1 1 0 17694 10143 2711 9766 23683 27408 27408 1 IPVTLNMK Unmodified 914.52592 0.52592396 3319 Q9WTL7 Lypla2 Acyl-protein thioesterase 2 yes yes 0 0 0 0 11 0 1 66.521 66.521 2 0.014908 18396 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.568 49.074 0 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 16582 10144 3319 9767 23684 27409 27409 1 IPWFQYPIIYDIR Unmodified 1722.9134 0.91336383 1179 O35129;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 8.33 5.22 2 1 2 1 97.725 97.725 2;3 2.6294E-19 27875 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 149.41 124.99 49.419 34.394 33.165 51.737 16.446 20.851 47 35 32 50 17 20 4 3 1 4 2 3 107530 10145 1179 9768 23685;23686;23687;23688;23689;23690 27410;27411;27412;27413;27414;27415 27414 6 IQAGEGETAVLNQLQEK Unmodified 1826.9374 0.93740633 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 5 0 1 69.065 69.065 3 1.6639E-06 24881 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.08 83.72 0 19.914 18.078 28.848 36.058 38.413 0 19 19 28 37 37 0 1 1 1 1 1 2533.3 10146 2424 9769 23691 27416 27416 1 IQALQQQADDAEDR Unmodified 1599.7489 0.74887728 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 5 0 1 53.285 53.285 3 0.0065283 17530 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.318 32.412 0 59.584 0 30.604 0 49.036 0 56 0 28 0 46 0 1 0 1 0 1 2115.6 10147 2196 9770 23692 27417 27417 1 IQAQQQATKPSK Unmodified 1326.7256 0.72556306 573 B1AQX9;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 1 8 0 1 39.036 39.036 4 0.0012383 8733 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.375 40.146 49.128 45.631 0 60.037 62.255 86.702 46 46 0 56 65 83 1 1 0 1 1 1 3087.6 10148 573 9771 23693 27418 27418 1 IQASVATNPIITPVAQENQ Unmodified 1993.048 0.04801941 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 0 8.67 3.09 1 1 1 74.6 74.6 3 6.4442E-08 26988 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.705 65.99 69.71 6.9013 67.389 86.795 71.423 146.14 65 9 65 84 75 139 2 1 1 2 2 3 31003 10149 1325 9772 23694;23695;23696 27419;27420;27421 27419 3 IQAYDYLECSAK Unmodified 1459.6653 0.66533057 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 0 9.5 3.5 1 1 66.019 66.019 3 0.001183 22911 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.898 38.945 196.5 181.59 183.42 190.51 98.75 282.87 185 186 185 186 102 268 3 3 2 2 1 3 41474 10150 1733 9773 23697;23698 27422;27423;27424 27422 3 IQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSR Unmodified 3670.8366 0.83663624 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 1 5 0 1 90.471 90.471 4 2.1794E-15 34398 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.062 68.272 6.3247 12.196 8.713 5.8667 9.1445 0 6 12 9 6 9 0 1 1 1 1 1 0 1873.3 10151 237 9774 23699 27425 27425 1 IQDFNDTFYR Unmodified 1317.599 0.59896556 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 6 0 1 65.411 65.411 2 0.0047217 22574 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.066 43.968 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10152 1929 9775 23700 27426 27426 1 IQDGTGR Unmodified 745.37187 0.37186616 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 5 0 1 28.591 28.591 2 0.027622 5833 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.009 34.703 156.81 194.06 170.39 170.71 204.85 263.85 148 195 176 169 212 253 1 1 1 1 1 1 20307 10153 2960 9776 23701 27427 27427 1 IQDIEVLK Unmodified 956.55425 0.5542472 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 10 3 1 1 68.098 68.098 2;3 0.0033938 23166 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.239 23.676 168.6 106.68 66.774 156.7 57.403 178.02 158 112 65 148 56 167 2 2 1 2 1 1 17637 10154 3210 9777 23702;23703 27428;27429 27428 2 IQDKEGIPPDQQR Unmodified 1522.774 0.77396981 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50;D3YYZ2 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a;Gm5239 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 1 5.25 0.433 3 1 43.349 43.349 3 0.00026601 12461 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.401 56.203 523.31 578.27 536.49 602.28 448.02 617.57 491 574 544 588 450 587 4 4 4 5 3 4 26670 10155 58 9778 23704;23705;23706;23707 27430;27431;27432;27433;27434;27435;27436 27431 7 IQDLKPQCIVFLNIPR Unmodified 1953.087 0.086987874 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 1 11 0 1 79.923 79.923 3 6.6877E-05 24600 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.093 72.309 0 67.932 73.461 56.83 0 0 0 65 74 56 0 0 0 1 1 1 0 0 8441.7 10156 466 9779 23708 27437 27437 1 IQDLSLLYQLFSR Unmodified 1594.8719 0.87189295 419 A2A432;E9PXY1;J3QJX0 Cul4b Cullin-4B yes no 0 0 0 0 11 0 1 103.31 103.31 3 7.5608E-05 34210 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.887 62.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10157 419 9780 23709 27438 27438 1 IQEAGTEVVK Unmodified 1072.5764 0.57643921 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 6.6 3.26 1 2 1 1 50.597 50.597 2;3 3.2532E-11 16397 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 162.36 86.984 1833.9 1496.1 1919.1 1709.9 1933.5 2054.4 1726 1542 1920 1697 1991 1976 6 6 5 6 6 5 535580 10158 1327 9781 23710;23711;23712;23713;23714 27439;27440;27441;27442;27443;27444;27445 27441 7 IQEAYGDVSGLCR Unmodified 1466.6824 0.68237762 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 6 0 1 59.752 59.752 2 0.01035 19999 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.291 34.988 20.076 27.962 28.517 0 0 0 19 28 28 0 0 0 1 1 1 0 0 0 2722.4 10159 487 9782 23715 27446 27446 1 IQEDPNGK Unmodified 899.43486 0.43486035 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 5 0 1 39.563 39.563 2 0.0089868 10931 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.311 53.093 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10160 1152 9783 23716 27447 27447 1 IQEGAAVLQK Unmodified 1055.5975 0.597509 1700 P61750;E9Q798;F6UFB9 Arf4 ADP-ribosylation factor 4 yes no 0 0 0 0 7 0 1 56.452 56.452 2 0.0020565 17554 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.568 34.398 0 0 67.783 57.168 0 39.442 0 0 65 56 0 37 0 0 1 1 0 1 2743.5 10161 1700 9784 23717 27448 27448 1 IQEGVESLAGYADIFLR Unmodified 1879.968 0.96797818 2873 Q99MN9;D3YZC1 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 97.642 97.642 3 5.9757E-09 35894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.253 60.115 0 0 0 0 9.0934 9.3345 0 0 0 0 9 9 0 0 0 0 1 1 1853.8 10162 2873 9785 23718;23719 27449;27450 27449 2 IQEGVFDINNEANGIK Deamidation (N) 1760.8581 0.85809337 1617 P53994 Rab2a Ras-related protein Rab-2A yes yes 0 1 0 0 4.67 0.471 1 2 72.564 72.564 3;4 1.4537E-05 26326 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.234 48.906 0 28.847 77.115 51.72 34.676 68.301 0 28 75 51 37 65 0 1 2 1 1 2 16582 10163 1617 9786 23720;23721;23722 27451;27452;27453 27452 621;622;623 3 IQEGVFDINNEANGIK 3 Deamidation (N) 1762.8261 0.82612454 1617 P53994 Rab2a Ras-related protein Rab-2A yes yes 0 3 0 0 4 0 1 74.919 74.919 3 0.00070289 27629 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.193 33.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10164 1617 9786 23723 27454 27454 621;622;623 1 IQEIQTFR Unmodified 1033.5556 0.55564418 2996 Q9CYT6;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2 yes no 0 0 0 0 9.5 3.5 1 1 55.792 55.792 2 0.011521 18253 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.098 60.956 276.68 143.96 264.94 142.4 112.81 234.5 260 157 260 139 111 223 2 2 2 1 1 2 36399 10165 2996 9787 23724;23725 27455;27456 27455 2 IQEITEQLDITTSEYEK Unmodified 2038.9946 0.99464644 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9 4 1 1 81.889 81.889 3;4 0.00067613 31659 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.621 30.515 69.131 183.56 6.3131 147.17 175.06 96.855 65 177 9 138 177 93 2 3 1 3 3 2 19476 10166 1766 9788 23726;23727 27457;27458;27459 27458 3 IQEITEQLDITTSEYEKEK Unmodified 2296.1322 0.13220255 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 5.75 0.829 2 1 1 77.847 77.847 3;4 1.3359E-10 28404 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.55 89.351 197.53 106.36 254.4 50.143 188.28 149.2 186 111 244 56 186 145 3 2 3 2 2 3 27407 10167 1766 9789 23728;23729;23730;23731 27460;27461;27462;27463 27462 4 IQEMSDEVLDSNPYSR Unmodified 1881.8415 0.84145703 2704 Q8VE47;F6VRI6;D6RH76;A0A1L1SSH6 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 0 0 0 4 0 1 70.335 70.335 3 0.04038 25525 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 33.405 15.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10168 2704 9790 23732 27464 27464 1 IQEPYTFPAILK Unmodified 1418.781 0.78095267 2360 Q8BFR4;A0A1W2P8D3 Gns N-acetylglucosamine-6-sulfatase yes no 0 0 0 0 9 0 1 79.928 79.928 3 0.028611 27297 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.725 6.5461 0 38.922 26.668 29.015 0 0 0 37 28 28 0 0 0 1 1 1 0 0 2196.3 10169 2360 9791 23733 27465 27465 1 IQESLIDLEGSADPTATLTAAEER Unmodified 2529.2446 0.24460655 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 4 0 1 83.568 83.568 3 6.5776E-10 31678 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.051 52.768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10170 2554 9792 23734 27466 27466 1 IQESYGDVYGICTK Unmodified 1631.7501 0.75012283 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 5.5 0.5 1 1 64.736 64.736 3 0.0013285 22928 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.52 35.322 88.278 45.546 92.616 84.181 54.116 107.19 83 46 92 83 56 102 2 1 2 2 1 2 16496 10171 1096 9793 23735;23736 27467;27468 27467 2 IQEVDAQMLR Unmodified 1201.6125 0.61250714 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 58.927 58.927 2;3 3.5883E-07 19648 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.22 84.892 228.24 199.53 63.979 157.09 45.769 215.09 214 203 65 148 46 203 4 4 1 3 1 4 25181 10172 2998 9794 23737;23738;23739 27469;27470;27471;27472 27470 4 IQEYNVLLDTLSR Unmodified 1562.8304 0.83042206 1628 P55302 Lrpap1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 0 7 0 1 83.002 83.002 2 0.0074282 30092 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.161 24.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10173 1628 9795 23740 27473 27473 1 IQFHNVKPECLDAYNSLTEAVLPK Unmodified 2785.4109 0.41090079 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 1 9.75 1.92 1 2 1 74.816 74.816 4;5 8.6574E-19 25803 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.13 95.614 196.91 211.88 177.77 193.45 186.75 340.05 185 213 176 185 194 324 2 2 2 2 2 3 42499 10174 1237 9796 23741;23742;23743;23744 27474;27475;27476;27477 27474 4 IQFNDLQSLLCATLQNVLR Unmodified 2245.1889 0.18888676 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 12 0 1 115.36 115.36 3 8.5866E-08 30919 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.554 65.139 3.219 0 0 3.279 0 3.198 3 0 0 3 0 3 1 0 0 1 0 1 1252 10175 1798 9797 23745 27478 27478 1 IQFNESFAEMNR Unmodified 1484.6718 0.67181293 1418 P19783;M0QWX7 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 66.544 66.544 2 0.00012035 23053 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.611 71.042 87.846 35.299 173.93 70.001 27.352 49.036 83 37 166 74 28 46 2 1 2 2 1 1 9049 10176 1418 9798 23746;23747 27479;27480 27479 2 IQGATIPINQAR Unmodified 1280.7201 0.72008375 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 8 0 1 53.42 53.42 2 0.0014255 15462 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.672 26.548 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2678.6 10177 2633 9799 23748 27481 27481 1 IQGATIPINQARPNR Unmodified 1647.9169 0.91688608 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 1 9.5 0.5 1 1 47.034 47.034 3 0.00012275 10529 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.628 42.423 98.959 47.966 98.812 62.071 46.807 122.32 93 51 97 60 46 116 2 1 2 1 1 2 16299 10178 2633 9800 23749;23750 27482;27483 27483 2 IQGLTVEQAEAVVR Unmodified 1511.8308 0.83075641 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6.5 0.5 1 1 67.584 67.584 3 3.813E-05 23590 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.481 74.785 59.699 34.742 35.942 58.532 28.359 49.036 56 37 37 56 28 46 1 1 1 2 1 1 9191.8 10179 3204 9801 23751;23752 27484;27485 27484 2 IQGSGILQLFANLLTPQASCTAK Unmodified 2430.2941 0.29408012 919;937 E9Q6Q4;A0A0G2JGC8;A0A0G2JF70;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 13 0 1 109.35 109.35 4 4.0757E-10 44242 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.827 47.93 0 0 0 9.6757 8.5752 11.481 0 0 0 9 9 11 0 0 0 1 1 1 1016.6 10180 919;937 9802 23753 27486 27486 1 IQHALETIHHLK Unmodified 1438.8045 0.80448208 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10 0 1 53.121 53.121 4 0.01293 12957 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.616 27.59 68.781 82.128 92.476 64.563 51.597 116.85 65 83 93 65 56 111 1 1 1 1 1 1 5246.1 10181 570 9803 23754 27487 27487 1 IQHFYNVGQWAK Unmodified 1489.7466 0.74663285 603 B1AXV0 Frrs1l DOMON domain-containing protein FRRS1L yes yes 0 0 0 0 11 0.816 1 1 1 61.977 61.977 3 1.8091E-08 16338 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.63 86.308 49.128 193.53 0 154.59 148.98 86.912 46 185 0 144 149 83 1 3 0 3 2 2 29083 10182 603 9804 23755;23756;23757 27488;27489;27490 27489 3 IQIFPVDSAIDTISPLNQK Unmodified 2098.131 0.13102076 1915 Q3TDD9 Ppp1r21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 0 9 0 1 90.539 90.539 3 2.8276E-05 32043 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.997 41.297 9.657 0 0 41.534 0 9.594 9 0 0 38 0 9 1 0 0 1 0 1 1759.3 10183 1915 9805 23758 27491 27491 1 IQLEQVQEWK Unmodified 1299.6823 0.68230126 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 69.316 69.316 3 0.00024066 23667 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.937 69.02 119.18 89.372 92.384 26.875 112.99 85.254 112 93 92 28 112 83 2 2 2 1 2 2 8475.7 10184 895 9806 23759;23760;23761;23762 27492;27493;27494;27495 27493 4 IQLINNMLDK Unmodified 1200.6536 0.65364367 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 11.3 1.25 1 1 1 78.873 78.873 2;3 1.7466E-09 24519 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 159.34 102.9 186.9 258.65 322.09 294.09 181.75 233.35 176 260 325 287 186 222 2 4 4 3 3 3 97875 10185 1334 9807 23763;23764;23765 27496;27497;27498;27499;27500 27496 5 IQLINNMLDK Deamidation (N) 1201.6377 0.63765925 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 1 0 0 12 0 1 78.699 78.699 2 0.0081498 21239 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.986 30.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10186 1334 9807 23766 27501 27501 402 1 IQLLEEELDR Unmodified 1256.6612 0.66123147 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 4 0 1 77.521 77.521 2 0.0035882 28859 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.916 47.172 29.741 27.324 27.685 18.443 35.84 58.673 28 28 28 19 37 56 1 1 1 1 1 1 2616.7 10187 2196 9808 23767 27502 27502 1 IQLQDAGR Unmodified 899.48248 0.48247924 3075;3112 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q9DB41 Slc25a22;Slc25a18 Mitochondrial glutamate carrier 1;Mitochondrial glutamate carrier 2 no no 0 0 0 0 7 0 1 44.296 44.296 2 0.00094396 11871 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.36 40.141 220.12 182 0 0 270.21 264.12 206 185 0 0 267 255 1 1 0 0 1 1 25741 10188 3075;3112 9809 23768 27503 27503 1 IQLSEALCGFK Unmodified 1264.6486 0.64855829 3248 Q9JMC3 Dnaja4 DnaJ homolog subfamily A member 4 yes yes 0 0 0 0 9.5 0.5 1 1 76.708 76.708 3 0.001162 25750 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.878 42.345 99.26 77.139 48.723 56.523 141.82 28.503 93 75 46 56 139 28 2 2 1 2 3 1 6005.6 10189 3248 9810 23769;23770 27504;27505;27506 27505 3 IQLVAVNYIPEVR Unmodified 1512.8664 0.86641364 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 10 0 1 79.777 79.777 3 0.0032796 24939 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.092 17.867 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10190 2520 9811 23771 27507 27507 1 IQLVEEELDR Unmodified 1242.6456 0.6455814 782;926;757;905;1106;1107;1656;209;906;471 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 0 0 6.2 3.54 1 1 1 1 1 71.951 71.951 2 3.6058E-10 26404 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 161.17 73.867 439.35 496.86 664.7 317.61 676.92 210.14 413 491 657 321 668 203 7 6 9 6 8 3 250290 + 10191 905;906;1106;1107;1656;209;757;782;926;471 9812 23772;23773;23774;23775;23776 27508;27509;27510;27511;27512;27513;27514;27515;27516 27512 9 IQLVEEELDRAQER Unmodified 1726.885 0.88497683 782;926;757;905;1106;1107;1656;209;906;471 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 0 1 4.5 0.5 1 1 69.249 69.249 3 7.1164E-07 24997 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.99 79.523 49.176 101.05 0 0 36.688 58.649 46 102 0 0 37 56 1 2 0 0 1 1 27363 + 10192 905;906;1106;1107;1656;209;757;782;926;471 9813 23777;23778 27517;27518 27517 2 IQMSNLMNQAR Unmodified 1304.6329 0.632925 1597 P50518;A0A0N4SW07;A0A0N4SW34;A0A0N4SWA3 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 0 10.7 1.7 1 1 1 59.445 59.445 2 4.5932E-08 17689 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.23 83.035 267.25 55.128 120.64 200.98 205.97 221.18 250 65 120 194 213 213 3 2 2 3 3 3 38498 10193 1597 9814 23779;23780;23781 27519;27520;27521 27519 3 IQNDAGVR Unmodified 871.45118 0.45117911 1952;99 Q3U0V1;A0A0A6YVV5;A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8;A2AJ72;Q3TIX6 Khsrp;Fubp3;Fubp1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 no no 0 0 0 0 5.5 0.5 1 1 34.393 34.393 2 0.012022 8411 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.069 32.087 127.96 69.914 75.228 0 37.384 77.817 120 75 74 0 37 74 2 2 2 0 1 2 9510.7 10194 1952;99 9815 23782;23783 27522;27523 27522 2 IQNLEALLQK Unmodified 1168.6816 0.68157298 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 10 0.816 1 1 1 81.811 81.811 3 0.00011603 25842 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.573 60.349 87.989 110.31 111.56 73.392 103.29 38.166 83 111 111 74 102 37 2 3 2 2 2 1 11186 10195 2424 9816 23784;23785;23786 27524;27525;27526 27525 3 IQNVVTSFAPQR Unmodified 1358.7306 0.73064844 2123 Q61292;A0A0A6YY71 Lamb2 Laminin subunit beta-2 yes no 0 0 0 0 10 0 1 65.773 65.773 3 0.0004862 18473 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.267 36.46 0 0 38.334 38.156 0 20.254 0 0 37 37 0 19 0 0 1 1 0 1 4914.5 10196 2123 9817 23787 27527 27527 1 IQPALQEK Unmodified 925.52328 0.52328142 3326 Q9WU28;E9PZ62;E9PVG3;E9Q5Q8;E9Q093 Pfdn5 Prefoldin subunit 5 yes no 0 0 0 0 6.5 0.5 1 1 50.093 50.093 2 0.0059871 14526 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.87 43.84 99.041 70.963 65.5 94.609 166.77 103.97 93 74 65 93 167 102 2 2 1 2 2 2 8262.9 10197 3326 9818 23788;23789 27528;27529 27529 2 IQPEILELIK Unmodified 1194.7224 0.72237516 2406 Q8BHL5;F6YXR3;Q8BPU7 Elmo2;Elmo1 Engulfment and cell motility protein 2;Engulfment and cell motility protein 1 yes no 0 0 0 0 8 0 1 86.313 86.313 3 0.0013501 31067 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.555 46.701 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2012.7 10198 2406 9819 23790 27530 27530 1 IQPFDDDEEEDIWEDDETR Unmodified 2394.9612 0.96117406 1086 G3X9K4;Q8R3Q2 Ppp6r2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 yes no 0 0 0 0 1 0 1 76.893 76.893 3 2.3724E-08 26622 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.383 71.761 18.657 0 0 19.674 0 0 18 0 0 18 0 0 2 0 0 1 0 0 6380.5 10199 1086 9820 23791 27531;27532 27531 2 IQPFHFIK Unmodified 1028.5807 0.58073672 2274 Q78JE5;D3Z2G9;Q3V492 Fbxo22 F-box only protein 22 yes no 0 0 0 0 11 0 1 63.146 63.146 3 0.041225 16935 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.972 15.718 139.49 0 0 151.93 0 199.34 130 0 0 139 0 187 1 0 0 1 0 1 11383 10200 2274 9821 23792 27533 27533 1 IQPGNPNYTLSLK Unmodified 1443.7722 0.7721789 3123 Q9DBG3;H3BKM0 Ap2b1 AP-2 complex subunit beta yes no 0 0 0 0 9.5 1.71 2 2 1 1 64.649 64.649 2;3 5.4823E-21 20785 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 158.06 109.9 216.86 628.72 699.83 705.49 572.33 598.5 203 610 707 689 593 570 3 6 5 5 5 4 200110 10201 3123 9822 23793;23794;23795;23796;23797;23798 27534;27535;27536;27537;27538;27539;27540 27534 7 IQPGNPSFTLSLK Unmodified 1400.7664 0.76636524 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 10 0.816 1 1 1 71.953 71.953 2;3 0.00050361 21473 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.614 35.064 39.352 36.248 95.267 67.031 28.291 124.08 37 37 93 65 28 120 1 1 2 1 1 3 20146 10202 1203 9823 23799;23800;23801 27541;27542;27543 27542 3 IQPNDGPVFFK Unmodified 1260.6503 0.65027285 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 0 8.8 2.23 2 1 1 1 69.079 69.079 2;3 1.1701E-08 22896 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.45 86.502 393.57 352.9 344.23 471.96 198.97 467.63 370 361 343 454 200 444 4 4 3 5 1 4 95616 10203 2050 9824 23802;23803;23804;23805;23806 27544;27545;27546;27547;27548 27546 5 IQQEIAVQNPLVSER Unmodified 1722.9264 0.92644771 2293 Q7TQI3;D3YWF6;D3Z7K0 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 8 3.56 1 1 1 66.4 66.4 2;3 1.1668E-16 23054 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.79 93.501 128.29 56.926 30.048 30.604 112.8 96.226 120 56 28 28 111 92 4 2 1 1 3 2 34553 10204 2293 9825 23807;23808;23809 27549;27550;27551;27552 27551 4 IQQIAEGEK Unmodified 1014.5346 0.53457439 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 5 0 1 52.453 52.453 3 0.0031318 17113 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.657 17.748 49.07 26.043 26.362 47.671 55.086 37.87 46 28 28 46 56 37 1 1 1 1 1 1 3019.9 10205 2059 9826 23810 27553 27553 1 IQQIIEGK Unmodified 927.53893 0.53893149 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 8.5 0.5 1 1 63.392 63.392 2;3 0.010547 19506 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.107 21.535 128.36 79.657 0 182.53 0 158.83 120 83 0 167 0 149 1 1 0 2 0 2 16241 10206 1653 9827 23811;23812 27554;27555 27555 2 IQQLAISGLK Unmodified 1069.6495 0.64954457 2650;3228 Q8R2R9;Q9JKC8;H7BWY2;A0A286YDZ6 Ap3m2;Ap3m1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 0 0 10.5 0.5 1 1 69.048 69.048 2 1.0985E-05 19573 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.94 54.719 202.51 59.629 178.25 73.03 122.17 84.214 190 65 172 74 120 79 2 1 2 1 1 1 23376 10207 2650;3228 9828 23813;23814 27556;27557 27557 2 IQQLLNTLK Unmodified 1069.6495 0.64954457 786;617 D3Z7D3;F8WI56;Q8BWT5;B2RQC7;Q3UH60 Dip2a;Dip2b Disco-interacting protein 2 homolog A;Disco-interacting protein 2 homolog B no no 0 0 0 0 11.7 0.471 1 2 80.127 80.127 2;3 0.00069863 21767 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 118.71 29.464 59.813 54.487 65 60.189 54.18 75.49 56 55 65 56 56 74 1 1 1 1 1 2 17557 10208 786;617 9829 23815;23816;23817 27558;27559;27560 27560 3 IQQLTALGAAQATVK Unmodified 1511.8671 0.86714192 3326 Q9WU28;E9PZ62;E9PVG3 Pfdn5 Prefoldin subunit 5 yes no 0 0 0 0 10.5 0.5 1 1 69.764 69.764 2;3 0.00010229 20434 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.62 66.4 66.215 0 28.931 28.353 27.986 0 65 0 28 28 28 0 2 0 1 1 1 0 16464 10209 3326 9830 23818;23819 27561;27562 27561 2 IQQLVNTLK Unmodified 1055.6339 0.63389451 614 B2RQ71;E9PWR4;B7ZMZ7 Dip2c yes no 0 0 0 0 12 0 1 72.179 72.179 2 0.015879 18638 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.735 29.587 0 29.792 0 30.079 27.906 0 0 28 0 28 28 0 0 1 0 1 1 0 2905.7 10210 614 9831 23820 27563 27563 1 IQQNQSIR Unmodified 985.53049 0.53049207 347 F8VPK5;A0A1Y7VMN0;P70336;A0A1Y7VLD1 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 6 0 1 33.82 33.82 2 0.049916 7760 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.673 21.277 19.905 27.486 57.632 27.169 0 49.036 19 28 56 28 0 46 1 1 1 1 0 1 4061.6 10211 347 9832 23821 27564 27564 1 IQRPPEDSIQPYEK Unmodified 1698.8577 0.85769944 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 1 5 0 1 50.397 50.397 3 2.9339E-05 16145 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.19 74.364 0 58.65 55.888 26.599 35.831 48.014 0 56 56 28 37 46 0 1 1 1 1 1 5003.8 10212 2783 9833 23822 27565 27565 1 IQSILSSGGK Unmodified 988.55531 0.55530983 2078 Q60648 Gm2a Ganglioside GM2 activator yes yes 0 0 0 0 10 0 1 63.023 63.023 2 0.0012681 17326 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.701 55.008 45.669 25.757 57.167 37.034 0 39.442 43 28 56 37 0 37 1 1 1 1 0 1 4019.8 10213 2078 9834 23823 27566 27566 1 IQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVR Unmodified 3552.8464 0.84641306 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 12.5 0.5 1 1 120.65 120.65 4 6.1655E-10 31954 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.977 46.172 0 5.2403 4.7674 7.3669 0 0 0 5 5 7 0 0 0 1 1 1 0 0 5532.3 10214 237 9835 23824;23825 27567;27568;27569 27568 3 IQSQIGGPFLSLPMVFK Unmodified 1861.0172 0.017176974 485 A2AKW0;Q5HZI9 Slc25a51 Solute carrier family 25 member 51 yes no 0 0 0 0 11.5 0.5 1 1 96.093 96.093 3 1.2998E-05 27521 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.979 48.728 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 0 1873.6 10215 485 9836 23826;23827 27570;27571 27571 2 IQSSLGGK Unmodified 788.43922 0.43921744 735 D3Z041;P41216 Acsl1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 0 9 0 1 47.022 47.022 2 0.04838 11735 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.297 17.731 59.613 0 79.767 0 80.333 66.998 56 0 74 0 79 65 1 0 1 0 1 1 3521.7 10216 735 9837 23828 27572 27572 1 IQSTPVK Unmodified 771.44905 0.44905385 1742;2065 P62821;Q5SW88;Q5SW87;Q5SW86 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 0 9.5 2.06 2 1 1 43.156 43.156 2;3 0.012646 10100 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.4 49.185 546.54 562.92 719.42 591.27 802.76 717.96 515 575 723 594 817 695 3 4 4 4 4 4 63325 10217 1742;2065 9838 23829;23830;23831;23832 27573;27574;27575;27576 27575 4 IQTLSAIDTIK Unmodified 1201.6918 0.69180331 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 0 0 0 0 7.5 0.5 1 1 71.061 71.061 2 3.3954E-33 23784 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 191.04 128.33 68.9 92.962 80.431 125.11 124.94 154.2 65 93 83 121 130 148 1 2 1 2 2 2 16684 10218 2709 9839 23833;23834 27577;27578 27578 2 IQTQIDVINK Unmodified 1170.6608 0.66083754 928 F7AAP4;E9Q828 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 8 0 1 62.297 62.297 2 0.0075143 19683 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.17 29.738 0 0 9.3562 8.5712 37.65 19.18 0 0 9 9 37 19 0 0 1 1 1 1 2703.5 10219 928 9840 23835 27579 27579 1 IQTQMDVVNAFQSGSSIQGALR Unmodified 2349.1747 0.17469326 333 A0A1W2P882 no no 0 0 0 0 6 5 1 1 77.918 77.918 3 7.7103E-16 23643 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.768 67.169 20.207 0 30.194 0 19.197 19.706 19 0 28 0 19 19 1 0 1 0 1 1 3267.9 10220 333 9841 23836;23837 27580;27581 27581 2 IQTQMDVVNAFQSGSSIQGALR Deamidation (N) 2350.1587 0.15870885 333 A0A1W2P882 no no 0 1 0 0 12 0 1 77.775 77.775 3 0.00038638 21027 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.746 32.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10221 333 9841 23838 27582 27582 93 1 IQTQPGYANTLR Unmodified 1360.7099 0.709913 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 48.141 48.141 2 8.9234E-27 13706 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 176.18 93.539 148.02 54.701 168.32 170.76 92.271 126.35 139 56 162 167 97 121 2 2 2 3 2 3 51692 10222 2715 9842 23839;23840;23841 27583;27584;27585 27583 3 IQTTAPPVK Unmodified 953.55458 0.55458155 1530 Q05DV1;P37040;E9PVT9;E9Q997 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 8 0 1 48.641 48.641 2 0.014177 13265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.256 37.415 39.352 37.327 27.005 19.158 0 39.442 37 38 28 19 0 37 1 1 1 1 0 1 2472 10223 1530 9843 23842 27586 27586 1 IQTVAAK Unmodified 729.43849 0.43848916 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 8.5 0.5 1 1 45.601 45.601 2 0.03624 11868 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.296 14.264 69.57 102.87 57.858 126.73 110.17 155.69 65 102 60 121 116 149 1 2 1 2 2 2 10167 10224 3245 9844 23843;23844 27587;27588 27587 2 IQTYLESTKPIIDLYEEMGK Unmodified 2370.2029 0.20286507 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 1 8 0 1 91.414 91.414 4 4.6298E-08 33186 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.555 47.902 0 50.008 0 30.604 0 29.848 0 47 0 28 0 28 0 1 0 1 0 1 4529.9 10225 3130 9845 23845 27589 27589 1 IQVHYYEDGNVQLVSHK Unmodified 2028.0065 0.0064889465 1564;1563 P47753;Q5RKN9;P47754 Capza1;Capza2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 0 0 0 12 0 1 54.379 54.379 4 1.7566E-06 11920 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.586 57.55 54.334 35.11 35.547 47.295 45.943 0 51 37 37 46 46 0 1 1 1 1 1 0 4654.9 10226 1563;1564 9846 23846 27590 27590 1 IQVIDISMILAEAIR Unmodified 1683.9593 0.95932774 1064;2967 G3UXL2;Q9D7G0;Q9CS42 Prps1l3;Prps1;Prps2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 0 11.3 1.25 1 1 1 108.01 108.01 3 2.1471E-07 33912 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.34 25.232 14.956 10.662 21.033 5.3516 6.0302 0 14 11 21 5 6 0 2 2 2 1 1 0 6104.5 10227 1064;2967 9847 23847;23848;23849 27591;27592;27593;27594 27591 4 IQVLPYK Unmodified 859.51674 0.51673948 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 11 0 1 63.028 63.028 2 0.027669 16955 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.071 36.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8634.4 10228 1967 9848 23850 27595 27595 1 IQVLQQQADDAEER Unmodified 1641.7958 0.79582747 782;926;757 D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3-rs7;Tpm3 no no 0 0 0 0 5.5 0.5 1 1 56.566 56.566 2 1.9093E-24 19104 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.96 129 50.393 7.5527 0 50.681 36.668 39.462 47 9 0 47 37 38 2 1 0 2 1 2 9369.3 10229 757;782;926 9849 23851;23852 27596;27597 27596 2 IQVWHAEHR Unmodified 1174.5996 0.59957468 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 13 0 1 36.414 36.414 4 0.061499 9686 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 37.344 25.151 0 0 47.713 46.226 64.245 47.203 0 0 46 46 65 46 0 0 1 1 1 1 2804.7 10230 1451 9850 23853 27598 27598 1 IQWAEELIAAFK Unmodified 1417.7606 0.76055158 2665 Q8R4N0 Clybl Citrate lyase subunit beta-like protein, mitochondrial yes yes 0 0 0 0 11.2 1.09 1 2 1 105.67 105.67 3 0.00010533 34863 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.289 56.428 5.3185 43.265 0 19.253 60.116 9.0357 5 41 0 19 58 9 1 2 0 2 3 1 5598.9 10231 2665 9851 23854;23855;23856;23857 27599;27600;27601;27602;27603 27601 5 IQYQLVDISQDNALR Unmodified 1774.9214 0.92136233 2747 Q91VW3 Sh3bgrl3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 0 0 6.5 0.5 1 1 72.901 72.901 3 0.00074488 25235 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.261 38.308 39.701 0 58.114 95.026 109.86 85.343 37 0 56 92 112 83 1 0 1 2 2 2 14432 10232 2747 9852 23858;23859 27604;27605 27605 2 IQYQLVDISQDNALRDEMR Unmodified 2306.1325 0.1324941 2747 Q91VW3 Sh3bgrl3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 0 1 7.75 3.11 1 1 1 1 70.97 70.97 3 3.4463E-07 25888 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.016 64.971 98.827 112.67 174.64 160.12 153.21 145.91 93 111 167 157 157 139 2 2 3 3 3 3 42806 10233 2747 9853 23860;23861;23862;23863 27606;27607;27608;27609 27606 4 IQYVHSLEELER Unmodified 1514.7729 0.77290718 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 0 6 0 1 62.484 62.484 3 0.00079626 21267 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.375 34.046 19.981 48.204 27.303 0 57.278 37.808 19 47 28 0 56 37 1 1 1 0 1 1 5512.2 10234 2403 9854 23864 27610 27610 1 IRDEMVATEQER Unmodified 1475.7038 0.70384134 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 1 3 0 1 42.451 42.451 3 0.026894 13216 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.659 19.319 0 39.368 0 20.767 0 0 0 37 0 19 0 0 0 1 0 1 0 0 4908 10235 1242 9855 23865 27611 27611 1 IREDLPNLESSEETEQINK Unmodified 2243.0917 0.091734718 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 1 4 0 1 60.685 60.685 3 4.0646E-57 21292 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.72 138.1 0 0 30.296 0 0 29.848 0 0 28 0 0 28 0 0 1 0 0 1 9871.8 10236 3174 9856 23866 27612 27612 1 IREEFPDR Unmodified 1060.5302 0.53015772 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 0 1 4 0.816 1 1 1 40.966 40.966 3 0.00026913 12603 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 153.05 85.148 273.34 895.75 433.28 516.38 577.22 1026.1 258 866 439 506 592 978 2 3 2 3 3 4 462080 10237 3072 9857 23867;23868;23869 27613;27614;27615;27616 27613 4 IREEIEHFGIK Unmodified 1369.7354 0.73539946 1477 P28661;Q5ND13 Sept4 Septin-4 yes no 0 0 0 1 6.5 0.5 1 1 60.18 60.18 4 0.0037382 20312 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.57 27.072 29.904 56.626 56.329 106.07 109.31 86.425 28 56 56 102 112 84 1 2 1 2 2 2 6587.5 10238 1477 9858 23870;23871 27617;27618 27617 2 IREEYPDR Unmodified 1076.5251 0.52507234 1795;2283;1863;2975;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain no no 0 0 0 1 5.4 3.93 1 1 1 1 1 33.641 33.641 3 0.00011584 9169 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.96 72.28 8349.1 7090.9 5695.7 7700.8 9333.7 8868.5 7846 7283 5716 7506 9537 8560 10 10 7 8 8 7 3148100 + 10239 1863;647;1795;2283;2805;2975 9859 23872;23873;23874;23875;23876 27619;27620;27621;27622;27623;27624;27625;27626;27627;27628 27621 10 IRPGEYEQFESTIGFK Unmodified 1899.9367 0.93667805 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 8.67 3.09 1 1 1 69.16 69.16 3 9.7701E-05 23565 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.167 52.25 59.76 65.13 0 38.688 93.213 66.63 56 65 0 37 93 65 1 1 0 1 1 1 8304.4 10240 526 9860 23877;23878;23879 27629;27630;27631 27630 3 ISAAGFPSR Unmodified 904.47667 0.47666558 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 0 1 50.207 50.207 2 0.020632 13929 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.485 19.765 59.729 0 60.291 0 103.76 85.517 56 0 56 0 102 83 1 0 1 0 1 1 6736.7 10241 728 9861 23880 27632 27632 1 ISAAMYK Unmodified 782.39966 0.39966081 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 9.5 0.5 1 1 53.736 53.736 2 0.017375 13153 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.63 32.018 162 0 183.39 139.74 67.006 210.22 152 0 176 139 69 199 2 0 2 2 1 2 12019 10242 2057 9862 23881;23882 27633;27634 27634 2 ISAEEALQHPYFSDFCPP Unmodified 2106.9357 0.93569177 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 0 5 0 1 80.128 80.128 3 0.00011378 30181 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.281 47.552 29.721 6.7591 48.626 37.543 0 29.848 28 9 47 37 0 28 1 1 1 1 0 1 4186.7 10243 78 9863 23883 27635 27635 1 ISAEGVDIVLDCLCGDNTGK Unmodified 2134.9875 0.98746934 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 13 0 1 88.711 88.711 3 1.4247E-05 35123 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.575 40.182 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1938.7 10244 2300 9864 23884 27636 27636 1 ISALALLK Unmodified 827.54804 0.54803961 1212 O35864;A0A087WQA8 Cops5 COP9 signalosome complex subunit 5 yes no 0 0 0 0 6.5 5.5 1 1 77.765 77.765 2 0.003264 27228 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.08 56.322 189.64 634.54 229.45 180.02 803.56 696.62 179 612 232 182 799 675 1 2 1 1 2 2 64031 10245 1212 9865 23885;23886 27637;27638 27637 2 ISALEGYR Unmodified 907.47633 0.47633123 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7 0 1 54.847 54.847 2 0.008394 16770 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.368 41.533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10246 2441 9866 23887 27639 27639 1 ISALNIVGDLLR Unmodified 1282.7609 0.76088593 3187 Q9ERR1;F6Q325;Q9CZA6 Ndel1;Nde1 Nuclear distribution protein nudE-like 1;Nuclear distribution protein nudE homolog 1 yes no 0 0 0 0 11 0 1 94.275 94.275 3 0.025337 30519 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.401 23.581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2019.1 10247 3187 9867 23888 27640 27640 1 ISALPVVDESGK Unmodified 1213.6554 0.65541781 686 D3YUS1;Q8BIQ9;Q91WG5 Prkag2 5'-AMP-activated protein kinase subunit gamma-2 yes no 0 0 0 0 7 0 1 66.035 66.035 3 0.029028 22051 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.789 8.4103 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10248 686 9868 23889 27641 27641 1 ISALQSAGVVVSMSPAQLGTTIYK Unmodified 2420.2985 0.29849679 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 87.16 87.16 3 5.2288E-23 27773 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.53 100.69 13.821 14.836 25.175 20.552 0 0 13 14 25 19 0 0 1 1 2 1 0 0 8951.5 10249 3337 9869 23890;23891 27642;27643 27642 2 ISALTIAGLNIAPCVR Unmodified 1667.9393 0.939261 2613 Q8K3I4 Myrip Rab effector MyRIP yes yes 0 0 0 0 12 0 1 83.951 83.951 3 0.0053899 23291 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.958 26.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10250 2613 9870 23892 27644 27644 1 ISAPNTK Unmodified 729.4021 0.40210366 3418 yes yes 0 0 0 0 10 0 1 46.853 46.853 3 0.056357 10391 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.067 1.3491 191.57 281.57 205.02 364.59 305.25 339.87 181 280 221 350 319 327 1 1 1 1 1 1 104940 + 10251 3418 9871 23893 27645 27645 1 ISAQDAK Unmodified 731.38137 0.38136821 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 7 0 1 39.631 39.631 2 0.037314 9723 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.438 21.457 117.88 138.48 88.014 83.259 117.75 114.97 111 139 93 83 120 111 1 1 1 1 1 1 9807.7 10252 2401 9872 23894 27646 27646 1 ISASPQR Unmodified 757.40825 0.40825167 1937 Q3TVK3;Q9Z2W0;Q8BPW9 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 7 0 1 30.95 30.95 2 0.028224 5791 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.32 33.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10253 1937 9873 23895 27647 27647 1 ISDALLQLTCISCVR Unmodified 1747.8961 0.89607556 959 Q0GNC1;E9QLA5 Inf2 Inverted formin-2 yes no 0 0 0 0 10.5 0.5 1 1 88.064 88.064 3 0.0041577 28411 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.639 36.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3038.3 10254 959 9874 23896;23897 27648;27649 27648 2 ISDEDWDIIHR Unmodified 1397.6575 0.65754307 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 4 0 1 62.352 62.352 3 0.0010804 21996 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.842 42.75 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 3958.2 10255 1602 9875 23898 27650 27650 1 ISDEMEDIIK Unmodified 1191.5693 0.56930492 3084 Q9D7X8 Ggct Gamma-glutamylcyclotransferase yes yes 0 0 0 0 4 0 1 71.955 71.955 3 0.0050221 26205 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.223 11.617 0 20.216 0 0 28.291 29.041 0 19 0 0 28 28 0 1 0 0 1 1 2411.4 10256 3084 9876 23899 27651 27651 1 ISDLGLACDFSK Unmodified 1324.6333 0.63330216 2871 Q99MK8;Q7TS64;Q8BVT9;Q3UYH7;E9PW16;F6QY34 Adrbk1;Adrbk2 Beta-adrenergic receptor kinase 1;Beta-adrenergic receptor kinase 2 yes no 0 0 0 0 7 0 1 74.906 74.906 3 0.0029231 25997 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.252 30.373 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 5694.4 10257 2871 9877 23900 27652 27652 1 ISDRTPSALAILENANVLAR Unmodified 2123.1699 0.16986588 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 1 8.5 0.5 1 1 78.975 78.975 3 4.5142E-05 27596 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.536 36.461 29.629 27.012 86.828 27.111 94.038 58.081 28 28 83 28 93 56 1 1 2 1 2 1 10375 10258 1308 9878 23901;23902 27653;27654 27653 2 ISDSEGFK Unmodified 881.41306 0.41306227 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 6 0 1 51.298 51.298 2 0.020413 15981 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.043 34.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10259 2724 9879 23903 27655 27655 1 ISEEEELDTK Unmodified 1191.5507 0.55067797 2143 Q62048 Pea15 Astrocytic phosphoprotein PEA-15 yes yes 0 0 0 0 3.62 3.67 2 2 2 1 1 52.47 52.47 2;3 5.2591E-18 17320 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 179.81 111.42 500.08 522.06 684.24 653.2 382.87 550.86 471 532 689 639 395 527 6 8 8 7 4 6 302670 10260 2143 9880 23904;23905;23906;23907;23908;23909;23910;23911 27656;27657;27658;27659;27660;27661;27662;27663;27664 27658 9 ISEENIK Unmodified 831.4338 0.43379771 1836 Q3TWV4;P84091;A0A338P6T4 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 5.5 0.5 1 1 47.377 47.377 2 0.027526 14687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.531 20.421 256.39 185.57 212.59 122.22 295.16 287.93 241 194 213 120 297 278 2 2 2 1 2 2 18594 10261 1836 9881 23912;23913 27665;27666 27665 2 ISEETQPETEELPPVAHGVPITDR Unmodified 2643.3028 0.30279013 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 0 2.5 0.5 1 1 61.878 61.878 3 7.9047E-05 22001 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.286 35.358 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 7474.7 10262 1234 9882 23914;23915 27667;27668 27668 2 ISEETQPETEELPPVAHGVPITDRR Unmodified 2799.4039 0.40390115 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 1 3 0 1 56.183 56.183 4 8.2219E-17 19591 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.669 61.428 29.757 37.079 16.888 29.072 27.953 0 28 37 19 28 28 0 1 1 1 1 1 0 6407.2 10263 1234 9883 23916 27669 27669 1 ISEIEDAAFLAR Unmodified 1333.6878 0.68778057 2367 Q8BFZ9 Erlin2 Erlin-2 no no 0 0 0 0 5 0 1 75.366 75.366 2 0.0011967 27852 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.412 37.016 29.952 18.196 0 71.045 0 0 28 19 0 65 0 0 1 1 0 1 0 0 3406.8 10264 2367 9884 23917 27670 27670 1 ISEKEEVTTR Unmodified 1190.6143 0.61428128 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 1 5 0 1 39.719 39.719 3 0.064849 11044 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.64 16.202 68.894 72.73 81.361 83.814 109.32 85.358 65 74 83 83 111 83 1 1 1 1 1 1 6841.8 10265 182 9885 23918 27671 27671 1 ISELEGNLQTLR Unmodified 1371.7358 0.73579339 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6 0 1 68.109 68.109 3 0.00062578 23832 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.966 37.18 0 58.811 46.243 0 48.116 0 0 56 46 0 46 0 0 1 1 0 1 0 5428.2 10266 2255 9886 23919 27672 27672 1 ISELGAGNGGVVFK Deamidation (N) 1347.7034 0.70343063 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 1 0 0 8.38 2.74 2 3 1 2 71.85 71.85 2;3 6.1186E-21 26918 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.91 103.06 187.57 213.49 93.104 177.08 303.31 251.26 176 214 92 167 306 242 4 5 2 3 5 4 65525 10267 1500 9887 23920;23921;23922;23923;23924;23925;23926;23927 27673;27674;27675;27676;27677;27678;27679;27680 27679 560 8 ISELTSELTDER Unmodified 1391.678 0.67800374 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9;E9Q405;A0A1C7ZN10;E9QA74 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 4 0 1 69.183 69.183 3 0.058887 25019 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.472 19.085 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 1634 10268 620 9888 23928 27681 27681 1 ISEPLHIHQVR Unmodified 1327.7361 0.73606817 3305 Q9R0X4 Acot9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 0 0 0 0 6 0 1 41.676 41.676 4 0.018432 11352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.958 16.86 0 0 40.034 0 18.538 38.913 0 0 37 0 19 37 0 0 1 0 1 1 3591.7 10269 3305 9889 23929 27682 27682 1 ISEQFTAMFR Unmodified 1228.591 0.59104341 1795;2283;1863;2975;3072;3183 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 8.78 3.22 1 1 1 2 1 2 1 79.929 79.929 2;3 1.4798E-37 24396 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 198.61 143.5 5649.7 4710.2 6926.9 6264.8 7586.5 5581.5 5312 4884 6894 6233 7706 5386 9 10 8 10 11 11 2739800 10270 1863;1795;2283;2975;3072;3183 9890 23930;23931;23932;23933;23934;23935;23936;23937;23938 27683;27684;27685;27686;27687;27688;27689;27690;27691;27692;27693;27694;27695;27696 27687 14 ISEQSDAK Unmodified 876.41888 0.41887593 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 6.25 3.96 1 1 1 1 37.225 37.225 2 0.00056225 10286 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 151.44 32.268 1110 2192.8 938.01 1319.2 2314.2 1511.6 1050 2146 1048 1293 2320 1480 4 4 4 3 4 4 297260 10271 1881 9891 23939;23940;23941;23942 27697;27698;27699;27700 27698 4 ISEQTYQLSR Unmodified 1223.6146 0.61461563 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 48.7 48.7 2 3.0345E-15 15413 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 173.24 123.28 644.65 479.74 589.8 781.89 899.3 500.12 606 501 599 763 909 489 5 6 5 6 5 4 258190 10272 1160 9892 23943;23944;23945;23946;23947 27701;27702;27703;27704;27705;27706 27706 6 ISFEEFCAVVGGLDIHK Unmodified 1919.9451 0.94513424 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 10 1 1 1 88.004 88.004 3 0.00063141 30987 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.278 34.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10273 2164 9893 23948;23949 27707;27708 27707 2 ISFEEFCAVVGGLDIHKK Unmodified 2048.0401 0.040097261 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 1 10.7 1.49 2 1 1 1 1 85.453 85.453 4 4.5926E-08 25593 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.07 63.191 736.04 822.49 658.07 693.28 602.96 422.14 692 830 660 668 596 398 5 7 5 6 5 3 133090 10274 2164 9894 23950;23951;23952;23953;23954;23955 27709;27710;27711;27712;27713;27714;27715;27716;27717 27713 9 ISFLENNLEQLTK Unmodified 1547.8195 0.81952302 1481;2139;1507 P28738;Q61768;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A no no 0 0 0 0 8.5 0.5 1 1 85.789 85.789 3 7.5505E-12 29812 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.28 83.121 59.015 59.584 0 120.83 26.047 29.848 55 56 0 111 28 28 1 2 0 2 1 1 28614 10275 1481;2139;1507 9895 23956;23957 27718;27719;27720 27719 3 ISFLENNLEQLTK Deamidation (N) 1548.8035 0.80353861 1481;2139;1507 P28738;Q61768;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A no no 0 1 0 0 13 0 1 85.244 85.244 3 0.0075113 33371 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.001 29.775 0 48.944 0 0 0 69.29 0 46 0 0 0 65 0 1 0 0 0 1 7647.4 10276 1481;2139;1507 9895 23958 27721 27721 551 1 ISFNEFVYIFQEVK Unmodified 1761.8978 0.89777334 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 0 9.5 0.5 1 1 102.54 102.54 3 5.9881E-05 36376 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.908 58.632 9 0 0 0 7 0 9 0 0 0 7 0 1 0 0 0 1 0 3976.3 10277 269 9896 23959;23960 27722;27723 27722 2 ISFPAVQAAPSFSNSFPK Unmodified 1893.9625 0.96249887 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 10 0.816 1 1 1 80.947 80.947 3;4 8.9971E-07 25567 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.995 43.201 0 29.792 0 113.6 0 0 0 28 0 111 0 0 0 1 0 2 0 0 14479 10278 1506 9897 23961;23962;23963 27724;27725;27726 27725 3 ISFTGSTATGK Unmodified 1068.5451 0.54513908 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 10.4 1.85 1 1 1 1 1 54.359 54.359 2;3 1.7364E-13 13437 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 152.04 95.494 125.08 290.27 369.23 171.88 472.45 236.79 118 285 365 176 467 232 2 4 5 3 5 4 60491 10279 2469 9898 23964;23965;23966;23967;23968 27727;27728;27729;27730;27731 27729 5 ISFTGSVPTGVK Unmodified 1191.6499 0.6499385 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 9.33 0.471 2 1 65.059 65.059 2;3 9.4993E-08 18162 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.5 62.7 83.056 82.082 108.01 39.019 192.76 0 78 83 102 37 186 0 2 2 2 1 3 0 23718 10280 1958 9899 23969;23970;23971 27732;27733;27734 27734 3 ISGASEK Unmodified 690.35482 0.35481911 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 37.022 37.022 2;3 0.021929 8501 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.301 20.827 39.32 182.27 140.12 199.41 227.75 141.68 37 176 148 194 229 139 1 2 2 2 1 1 26831 10281 1458 9900 23972;23973 27735;27736 27736 2 ISGASEKDIVHSGLAYTMER Unmodified 2163.063 0.063017547 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 6.5 0.5 1 1 61.312 61.312 4 0.0074727 20715 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.137 29.321 197.03 39.015 214.49 65.245 64.649 206.03 185 46 204 65 65 195 2 1 2 1 1 2 15561 10282 1458 9901 23974;23975 27737;27738 27737 2 ISGDLEVLAEK Unmodified 1172.6289 0.62886871 720 D3YYE1;D3Z7M9;O35381;F6UFG6;Q64G17 Anp32a;Anp32c Acidic leucine-rich nuclear phosphoprotein 32 family member A;Putative acidic leucine-rich nuclear phosphoprotein 32 family member C yes no 0 0 0 0 8 3.56 1 1 1 72.701 72.701 2;3 2.0873E-08 27072 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.46 54.015 39.317 124.12 54.31 76.324 117.37 135.23 37 120 56 74 120 130 1 2 1 1 2 2 20323 10283 720 9902 23976;23977;23978 27739;27740;27741 27741 3 ISGDQLLR Unmodified 900.50288 0.50288033 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 6 0 1 52.989 52.989 2 0.049495 16762 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.679 12.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10284 2339 9903 23979 27742 27742 1 ISGETIFVTAPHEATAGIIGVNR Unmodified 2352.2438 0.24375911 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 2.12 2 2 2 1 1 71.394 71.394 3;4 3.1796E-57 25460 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 161.59 138.61 365.08 256.82 594.83 315.97 406.59 558.5 343 260 574 315 408 532 6 6 8 7 6 6 269230 10285 2185 9904 23980;23981;23982;23983;23984;23985;23986;23987 27743;27744;27745;27746;27747;27748;27749;27750;27751;27752 27744 10 ISGLEEDLK Unmodified 1002.5233 0.523341 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 5 0 1 64.337 64.337 3 0.025324 22725 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.187 13.924 29.814 0 38.623 28.302 0 0 28 0 37 28 0 0 1 0 1 1 0 0 2976.6 10286 347 9905 23988 27753 27753 1 ISGLIYEETR Unmodified 1179.6136 0.61355299 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 63.723 63.723 2 4.082E-05 21763 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.71 73.222 703.2 614.17 777.13 496.19 481.68 780.43 661 634 776 486 492 745 5 7 7 4 6 7 270200 10287 1739 9906 23989;23990;23991;23992;23993 27754;27755;27756;27757;27758;27759;27760 27755 7 ISGSILNELIGLVR Unmodified 1482.877 0.87697832 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 101.37 101.37 2 1.3603E-28 28677 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 156 111.61 39.079 55.995 71.552 14.183 13.493 42.539 37 56 70 14 14 42 1 1 2 1 1 2 14429 10288 2264 9907 23994;23995 27761;27762;27763 27763 3 ISGTSIAFK Unmodified 922.51238 0.51238239 351 Q03141;A0A1Y7VNZ6 Mark3 MAP/microtubule affinity-regulating kinase 3 no no 0 0 0 0 10 0 1 61.039 61.039 2 0.0010423 16550 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.709 55.609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10289 351 9908 23996 27764 27764 1 ISGVATDIQALK Unmodified 1214.6871 0.68705229 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 8 0 1 69.988 69.988 2 1.811E-07 23356 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.34 68.326 0 0 0 0 37.384 38.375 0 0 0 0 37 37 0 0 0 0 1 1 2817.7 10290 816 9909 23997 27765 27765 1 ISHQSQDR Unmodified 969.46281 0.46280643 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 0 5.33 1.25 1 1 1 18.106 18.106 3 9.3781E-05 2544 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.34 53.205 14.856 20.036 26.489 21.624 24.773 18.481 14 20 27 21 25 18 1 2 2 2 1 1 10195 10291 3101 9910 23998;23999;24000 27766;27767;27768 27767 3 ISKAEEEFQK Unmodified 1207.6085 0.60846762 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 1 6 0 1 53.212 53.212 4 0.025586 16873 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.741 25.365 59.523 34.252 65.93 45.894 24.165 87.788 56 37 65 46 28 83 1 1 1 1 1 1 2568.6 10292 90 9911 24001 27769 27769 1 ISKLEQQLAK Unmodified 1156.6816 0.68157298 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 1 10 0 1 59.566 59.566 3 0.050223 15832 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.998 24.616 78.77 0 106.3 82.326 109.39 85.356 74 0 102 83 111 83 1 0 1 1 1 1 4368.3 10293 3336 9912 24002 27770 27770 1 ISLADIAQK Unmodified 957.5495 0.54949617 1378 P14685 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 0 9 0 1 68.014 68.014 3 0.044332 21696 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.997 16.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10294 1378 9913 24003 27771 27771 1 ISLGLPVGAVINCADNTGAK Unmodified 1969.0303 0.030260856 1745 P62830;A2A6F8 Rpl23 60S ribosomal protein L23 yes no 0 0 0 0 8.5 0.5 1 1 81.391 81.391 3 9.0647E-18 27964 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.25 99.455 78.986 0 69.932 0 0 0 74 0 65 0 0 0 2 0 2 0 0 0 15755 10295 1745 9914 24004;24005 27772;27773 27773 2 ISLNCTQK Unmodified 962.48552 0.48551571 740 D3Z0G0;Q9EQ80 Nif3l1 NIF3-like protein 1 yes no 0 0 0 0 9 0 1 49.417 49.417 2 0.050258 12788 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.534 11.747 0 0 40.034 0 0 39.442 0 0 37 0 0 37 0 0 1 0 0 1 3207.8 10296 740 9915 24006 27774 27774 1 ISLNTLTLNVK Unmodified 1214.7234 0.72343779 1170 O08917;G3UYU4;G3UZZ5;G3UWW8 Flot1 Flotillin-1 yes no 0 0 0 0 11.2 0.829 1 1 2 75.837 75.837 2;3 9.1984E-05 20093 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.813 43.477 0 158.54 0 108.86 139.4 77.847 0 149 0 102 139 74 0 3 0 2 2 2 41998 10297 1170 9916 24007;24008;24009;24010 27775;27776;27777;27778 27778 4 ISLPETGLAPTPSSQTK Unmodified 1725.9149 0.91487997 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 7.5 0.5 1 1 66.473 66.473 3 0.0031552 22286 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.704 25.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10298 3285 9917 24011;24012 27779;27780 27779 2 ISLPLPTFSSLNLR Unmodified 1556.8926 0.89262839 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 5.12 5.35 5 1 1 1 90.365 90.365 2;3 5.8111E-21 32563 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 136.53 70.179 128.82 98.899 118.93 142.97 211.37 24.004 121 98 121 139 212 23 3 3 4 3 6 2 119110 10299 1423 9918 24013;24014;24015;24016;24017;24018;24019;24020 27781;27782;27783;27784;27785;27786;27787;27788;27789 27784 9 ISLTQAGLEALFESNLLDDLK Unmodified 2289.2104 0.21039329 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 9 0 1 108.97 108.97 4 4.6605E-06 37410 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.826 41.703 6.438 0 0 0 15.69 0 6 0 0 0 15 0 1 0 0 0 1 0 1015.8 10300 2418 9919 24021 27790 27790 1 ISLVDLAGSERADSTGAK Unmodified 1788.9218 0.92175626 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;Q60575;A2AH75 Kif1a;Kif1b Kinesin-like protein;Kinesin-like protein KIF1A;Kinesin-like protein KIF1B yes no 0 0 0 1 7 0 1 83.763 83.763 3 0.060891 30394 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.947 5.6504 0 39.064 18.214 0 37.714 28.772 0 37 19 0 37 28 0 1 1 0 1 1 2608.2 10301 24 9920 24022 27791 27791 1 ISNAQNAELR Unmodified 1114.5731 0.57308516 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 9 4 1 1 39.472 39.472 2 3.2806E-05 11141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.171 42.725 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 4404.4 10302 2686 9921 24023;24024 27792;27793 27792 2 ISNEHSPK Unmodified 910.45084 0.45084476 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 6 0 1 31.365 31.365 3 0.038463 6596 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.891 9.4156 59.808 55.551 0 0 0 0 56 56 0 0 0 0 1 1 0 0 0 0 3981.1 10303 784 9922 24025 27794 27794 1 ISNGGLEEGQPVDLVLSCVDNFEAR Deamidation (N) 2718.2807 0.28067448 2704 Q8VE47 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 1 0 0 4 0 1 95.768 95.768 3 1.717E-19 34390 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.839 71.719 2 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 1031.2 10304 2704 9923 24026 27795 27795 975 1 ISNIPTIK Unmodified 884.53312 0.53311783 1445 P24472 Gsta4 Glutathione S-transferase A4 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 60.354 60.354 2;3 0.013143 21157 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.597 30.18 147.27 342.93 150.38 297.25 455.75 287.07 139 334 157 288 455 283 2 3 2 3 3 3 73685 10305 1445 9924 24027;24028;24029;24030 27796;27797;27798;27799 27799 4 ISNSSEFSAK Unmodified 1068.5088 0.50875357 814 E9PUC5;Q8C0E9 Psd3 yes no 0 0 0 0 6 0 1 49.18 49.18 2 0.0043656 14929 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.342 36.839 39.087 45.224 64.865 57.342 0 59.696 37 46 65 56 0 56 1 1 1 1 0 1 3790.4 10306 814 9925 24031 27800 27800 1 ISPDWISSMSIIR Unmodified 1503.7755 0.77554972 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 10.5 0.5 1 1 86.269 86.269 2 0.00032952 27278 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.767 45.052 39.701 20.216 0 0 48.116 9.594 37 19 0 0 46 9 1 1 0 0 1 1 6851.3 10307 2790 9926 24032;24033 27801;27802 27802 2 ISPEQHWDFTAEDLKDLGEIGR Unmodified 2555.2292 0.22923125 1567 P47809;B1ATL6 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 1 6 0 1 76.878 76.878 4 3.5754E-06 28020 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.247 35.433 118.03 34.824 151.64 130.49 136.1 96.056 111 37 148 130 139 92 2 1 2 2 2 1 5865.8 10308 1567 9927 24034 27803;27804 27803 2 ISPFEHQTYCQR Unmodified 1564.7093 0.70926107 1769;769 P63085;D3Z3G6;Q63844;A0A0U1RPX4;A0A0U1RPZ0 Mapk1;Mapk3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 0 0 0 0 6.5 0.5 1 1 45.614 45.614 3 3.7556E-05 12521 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.889 67.057 0 0 45.898 86.957 54.582 0 0 0 46 83 56 0 0 0 1 1 1 0 5139.7 10309 1769;769 9928 24035;24036 27805;27806 27806 2 ISPMLSPFISSVVR Unmodified 1531.8432 0.84323535 788 D3Z7P0;Q8K3W0;E9Q8Q1;A0A0J9YV56;E9Q0U3 Bre BRCA1-A complex subunit BRE yes no 0 0 0 0 6.5 5.5 1 1 87.384 87.384 2 0.0016704 31232 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.289 38.207 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10310 788 9929 24037;24038 27807;27808 27807 2 ISPTFADAYSNMGNTLK Unmodified 1828.8665 0.86654957 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 9 0 1 74.439 74.439 3 2.5382E-05 24708 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.673 39.944 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10311 2543 9930 24039 27809 27809 1 ISQAEEDDQQLLGHLLLVAK Unmodified 2219.1798 0.17976186 3033 Q9D0S9 Hint2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 85.145 85.145 4 0.0051384 31066 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.387 29.638 20.149 0 60.49 0 19.197 19.706 19 0 56 0 19 19 1 0 2 0 1 1 7503.7 10312 3033 9931 24040;24041 27810;27811 27811 2 ISQATAQIK Unmodified 958.54475 0.54474515 3177 Q9ER00 Stx12 Syntaxin-12 yes yes 0 0 0 0 10 2.16 1 1 1 48.998 48.998 2;3 0.0045258 13449 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.303 23.155 148.82 113.11 57.713 0 0 128.99 139 111 56 0 0 121 2 2 1 0 0 2 13686 10313 3177 9932 24042;24043;24044 27812;27813;27814 27812 3 ISQLYGDLK Unmodified 1035.5601 0.56006086 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 10.7 1.7 1 1 1 67.358 67.358 2 0.0025988 24557 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.297 42.569 129 184.82 57.43 156.48 98.973 224.23 121 180 56 148 102 213 2 2 1 2 1 2 40071 10314 2597 9933 24045;24046;24047 27815;27816;27817 27817 3 ISRPGDSDDSR Unmodified 1203.548 0.54799262 1110 G5E924;Q8R081;G3UY38;G3UY56;G3UYY3 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 1 8.5 4.5 1 1 27.86 27.86 3 0.00073034 5886 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.24 49.49 98.928 109.88 93.116 75.332 46.477 195.88 93 111 93 74 46 185 1 2 1 1 1 2 25250 10315 1110 9934 24048;24049 27818;27819 27818 2 ISSDLDGHPVPK Unmodified 1263.6459 0.64591575 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 6 0.816 1 1 1 49.224 49.224 3 0.00010199 15611 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.507 51.902 216.02 226.54 279.55 147.42 304.64 221.95 203 231 278 148 305 213 2 3 3 2 3 2 29676 10316 1537 9935 24050;24051;24052 27820;27821;27822 27820 3 ISSEEER Unmodified 848.38758 0.3875758 742 D3Z0L4;Q9D9P1;Q9CRB9 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 2 0.816 1 1 1 29.498 29.498 2 0.00095579 6820 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 157.86 43.278 350.3 199.31 287.11 129.64 455.33 0 329 209 283 130 441 0 3 2 2 1 3 0 86179 10317 742 9936 24053;24054;24055 27823;27824;27825 27824 3 ISSLLEEQFQQGK Unmodified 1505.7726 0.77257283 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 8 0 1 75.474 75.474 2 6.2964E-09 25898 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 76.828 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10318 1714 9937 24056 27826 27826 1 ISSPLFNTK Unmodified 1005.5495 0.54949617 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 10.5 0.5 1 1 63.891 63.891 2 0.001783 17869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.048 50.474 44.808 51.243 0 74.249 62.114 71.782 42 51 0 69 65 69 1 1 0 1 1 1 20016 10319 2543 9938 24057;24058 27827;27828 27827 2 ISSPTGSK Unmodified 775.40758 0.40758296 1179 O35129;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 7 0 1 40.065 40.065 2 0.054033 9940 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.999 5.9886 0 38.575 47.458 0 0 59.696 0 37 46 0 0 56 0 1 1 0 0 1 3801.3 10320 1179 9939 24059 27829 27829 1 ISSVQSIVPALEIANAHR Deamidation (N) 1905.032 0.031975416 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 0 7 0 1 74.949 74.949 3 7.6148E-07 26195 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.081 72.228 0 0 29.473 18.476 28.439 0 0 0 28 19 28 0 0 0 1 1 1 0 5302.5 10321 1766 9940 24060 27830 27830 696 1 ISSVQSIVPALEIANAHR Unmodified 1904.048 0.047959831 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.57 1.59 2 2 2 1 73.391 73.391 3;4 3.3265E-19 24859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.88 87.559 221.98 93.559 337.15 248.43 167.57 155.98 208 93 320 241 167 148 4 2 5 5 3 3 133250 10322 1766 9940 24061;24062;24063;24064;24065;24066;24067 27831;27832;27833;27834;27835;27836;27837;27838 27831 8 ISSVSEVMK Unmodified 978.50558 0.50558245 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7.5 0.5 1 1 58.827 58.827 2 0.0051058 18072 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.615 38.582 79.134 53.184 0 88.966 93.191 0 74 55 0 83 93 0 1 1 0 1 1 0 4093.7 10323 2517 9941 24068;24069 27839;27840 27840 2 ISSYVSWIK Unmodified 1081.5808 0.5807963 496 A2AN08 Ubr4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 0 11 0 1 76.108 76.108 2 0.0071915 22739 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.934 38.503 0 0 60.592 0 0 39.442 0 0 56 0 0 37 0 0 1 0 0 1 2791.4 10324 496 9942 24070 27841 27841 1 ISTASGDGR Unmodified 862.41446 0.41445926 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 8 3.56 1 1 1 30.403 30.403 2 0.00017359 6619 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.41 63.194 163.09 161.7 43.656 53.924 153.98 104.34 153 163 42 51 153 102 3 3 1 1 2 2 14082 10325 1772 9943 24071;24072;24073 27842;27843;27844 27842 3 ISTILFGAAYTCLEAATGR Unmodified 2014.0194 0.019361819 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 12 0 1 98.022 98.022 3 4.6848E-08 28003 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.21 86.05 0 14.664 13.867 9.0105 0 14.924 0 14 14 9 0 14 0 1 1 1 0 1 2836.8 10326 2686 9944 24074 27845 27845 1 ISTPVDVNNR Unmodified 1113.5778 0.57783619 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 10 3 1 1 46.71 46.71 2 0.00015756 13102 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.25 60.599 29.571 26.849 56.743 166.36 98.592 115.51 28 28 56 157 102 111 1 1 1 2 1 2 11851 10327 1827 9945 24075;24076 27846;27847 27846 2 ISTQQVK Unmodified 802.45487 0.45486751 3148 Q9DCM2 Gstk1 Glutathione S-transferase kappa 1 yes yes 0 0 0 0 8 0 1 41.791 41.791 2 0.03134 9984 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.212 24.424 0 59.166 25.011 38.95 0 0 0 56 28 37 0 0 0 1 1 1 0 0 2565.7 10328 3148 9946 24077 27848 27848 1 ISVAAASK Unmodified 745.4334 0.43340378 1243 O55234 Psmb5 Proteasome subunit beta type-5 yes yes 0 0 0 0 9.5 0.5 1 1 47.324 47.324 2;3 0.0096034 10648 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.802 31.821 87.885 91.017 120.17 84.65 0 0 83 93 120 84 0 0 2 2 2 2 0 0 8048.4 10329 1243 9947 24078;24079 27849;27850 27850 2 ISVAGVTSGNVGYLAHAIHQVTK Unmodified 2321.2492 0.24917883 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 9.75 0.433 1 3 71.213 71.213 3;4;5 2.1215E-07 21047 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.635 46.803 885.3 970.89 1114.2 996.02 1082 1317.1 835 980 1126 989 1114 1263 3 2 4 4 3 4 113720 10330 1312 9948 24080;24081;24082;24083 27851;27852;27853;27854;27855 27853 5 ISVCDEDKFGHNEFIGETR Unmodified 2252.0168 0.016795636 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 5.5 0.5 1 1 58.943 58.943 4 1.0701E-07 20365 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.271 83.164 69.129 91.785 149.88 98.802 199.43 0 65 93 148 102 195 0 1 2 2 2 2 0 9671.7 10331 1561 9949 24084;24085 27856;27857 27856 2 ISVFRPGLR Unmodified 1043.624 0.62399852 2649 Q9CYR0;Q8R2K3 Ssbp1 Single-stranded DNA-binding protein, mitochondrial;Single-stranded DNA-binding protein yes no 0 0 0 1 6.5 5.5 1 1 52.367 52.367 3 0.0014386 11083 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.502 54.072 207.68 227.39 262.72 306.31 140.84 193.19 195 231 269 297 148 185 1 2 2 2 1 1 65529 10332 2649 9950 24086;24087 27858;27859 27859 2 ISVGSDADLVIWDPDSVK Unmodified 1914.9575 0.95747307 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7.41 3.27 1 2 7 2 1 1 3 89.592 89.592 2;3;4 3.2091E-20 33385 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.86 112.63 453.09 389.73 499.96 562.98 248.56 421.01 427 391 499 543 253 399 10 8 11 13 8 7 267490 10333 1158 9951 24088;24089;24090;24091;24092;24093;24094;24095;24096;24097;24098;24099;24100;24101;24102;24103;24104 27860;27861;27862;27863;27864;27865;27866;27867;27868;27869;27870;27871;27872;27873;27874;27875;27876;27877;27878 27875 19 ISVNDFIIK Unmodified 1047.5964 0.59644637 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 77.281 77.281 2 0.00045585 29390 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.48 52.933 267.16 306.74 486.88 426.3 99.546 253 251 296 473 408 102 240 4 3 6 5 2 3 109430 10334 2433 9952 24105;24106;24107;24108;24109 27879;27880;27881;27882;27883;27884;27885 27885 7 ISVSDLINGIASLK Unmodified 1428.8188 0.81879474 398;400 A0A2R8VK70;A0A2R8VI30;Q61735;A0A2R8VJU9;A0A2R8W6P0;D3Z187;A0A2R8VI94 Cd47 Leukocyte surface antigen CD47 no no 0 0 0 0 8.29 4.74 2 1 2 1 1 99.388 99.388 2;3 2.4188E-25 28355 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 149.57 116.16 111.07 115.61 119.79 100.25 99.174 136.27 104 112 119 96 99 129 4 4 5 3 4 5 36757 10335 398;400 9953 24110;24111;24112;24113;24114;24115;24116 27886;27887;27888;27889;27890;27891;27892;27893 27892 8 ISVSDLINGIASLK Deamidation (N) 1429.8028 0.80281033 398;400 A0A2R8VK70;A0A2R8VI30;Q61735;A0A2R8VJU9;A0A2R8W6P0;D3Z187;A0A2R8VI94 Cd47 Leukocyte surface antigen CD47 no no 0 1 0 0 10.3 1.95 1 1 2 1 2 1 2 93.95 93.95 2;3 1.1702E-05 29959 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.29 67.927 158.12 32.735 217.72 63.295 113.51 233.2 151 33 205 60 112 223 4 2 5 2 2 5 69303 10336 398;400 9953 24117;24118;24119;24120;24121;24122;24123;24124;24125;24126 27894;27895;27896;27897;27898;27899;27900;27901;27902;27903;27904 27896 104 11 ISVYYNEASSHK Unmodified 1396.6623 0.6622941 3183 Q9ERD7;A0A1D5RM76 Tubb3 Tubulin beta-3 chain yes no 0 0 0 0 8.88 1.9 1 1 2 1 1 1 1 50.6 50.6 3;4 9.2222E-10 11888 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.941 75.087 274.89 498.62 734.27 569.54 959.25 363.16 259 496 731 561 954 352 3 6 7 5 7 4 167750 10337 3183 9954 24127;24128;24129;24130;24131;24132;24133;24134 27905;27906;27907;27908;27909;27910;27911;27912;27913 27911 9 ISVYYNEATGGK Unmodified 1300.6299 0.62993134 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 0 0 8 3.43 1 1 2 2 1 2 60.634 60.634 2;3 1.0746E-59 21216 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 208.74 145.92 558.56 821.98 983.47 943.2 1245.1 889.63 525 817 983 938 1261 861 6 7 6 9 9 7 590480 10338 1863 9955 24135;24136;24137;24138;24139;24140;24141;24142;24143 27914;27915;27916;27917;27918;27919;27920;27921;27922;27923 27922 10 ISVYYNEATGGK Deamidation (N) 1301.6139 0.61394692 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 1 0 0 8 2.61 2 1 1 1 59.348 59.348 2;3;4 1.2122E-06 18890 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.13 74.934 88.339 129.53 169.38 167.96 238.07 201.08 83 130 167 167 240 195 2 3 2 4 3 4 21133 10339 1863 9955 24144;24145;24146;24147;24148 27924;27925;27926;27927;27928 27926 752 5 ISWAMEDSDLER Unmodified 1450.6398 0.6398441 2582 Q8K0S0;E0CXJ1 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes no 0 0 0 0 5.5 0.5 1 1 68.718 68.718 2;3 0.00011563 24746 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.617 60.739 0 29.152 67.758 18.476 76.555 0 0 28 65 19 74 0 0 1 2 1 2 0 9153.4 10340 2582 9956 24149;24150 27929;27930 27929 2 ISWIPFMQEK Unmodified 1277.6478 0.64783001 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 11 0 1 85.934 85.934 3 0.0029427 27169 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.32 29.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10341 3176 9957 24151 27931 27931 1 ISWLTNGVPIEIALDDPSR Deamidation (N) 2096.079 0.078985188 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 1 0 0 8.5 2.69 1 1 1 1 95.627 95.627 3 3.6761E-07 35241 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.31 72.219 44.795 52.955 9.6896 0 25.104 0 42 52 9 0 24 0 3 3 1 0 2 0 14175 10342 331 9958 24152;24153;24154;24155 27932;27933;27934;27935 27933 91 4 ISYFTFIGTPVQATNMNDFK Unmodified 2293.1089 0.10890511 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 0 11 0 1 90.818 90.818 3 8.8265E-12 29153 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.552 63.13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10343 2525 9959 24156 27936 27936 1 ISYFTFIGTPVQATNMNDFKR Unmodified 2449.21 0.21001614 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 1 11 0 1 81.581 81.581 4 0.00048807 25363 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.848 27.479 69.745 0 0 29.902 37.328 0 65 0 0 28 37 0 1 0 0 1 1 0 4724.4 10344 2525 9960 24157 27937 27937 1 ISYYQYYLIAR Unmodified 1451.7449 0.74490152 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 12 0 1 74.333 74.333 2 0.0024505 19486 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.974 55.819 20.387 0 0 0 58.576 0 19 0 0 0 56 0 1 0 0 0 1 0 3290 10345 2890 9961 24158 27938 27938 1 ITAAEALK Unmodified 815.47527 0.4752686 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 55.486 55.486 2;3 0.0026675 16497 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 127.02 60.339 7751.1 6501.7 8421.8 5849.7 4806.1 8582.7 7301 6716 8421 5889 5124 8180 7 5 7 6 5 6 980660 10346 1355 9962 24159;24160;24161;24162;24163 27939;27940;27941;27942;27943;27944;27945 27943 7 ITADQALK Unmodified 858.48108 0.48108226 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 6.5 0.5 1 1 51.261 51.261 2 0.024845 15139 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.378 22.208 118.16 165.71 240 229.43 0 118.33 111 167 241 223 0 111 1 2 2 2 0 1 19881 10347 2818 9963 24164;24165 27946;27947 27947 2 ITAEEAISHEWISGNAASDK Unmodified 2128.0073 0.0072768075 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 5.5 0.5 1 1 65.953 65.953 3 2.1976E-22 23467 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 126.4 107.33 89.743 43.48 28.508 0 37.714 68.214 84 47 28 0 37 65 2 2 1 0 1 2 16533 10348 1986 9964 24166;24167 27948;27949 27948 2 ITAEEATK Unmodified 861.44436 0.4443624 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 4.5 0.5 1 1 43.486 43.486 2;3 0.0039557 12751 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.149 41.448 79.402 76.682 122.84 53.887 97.278 69.29 74 74 120 56 93 65 1 1 1 1 1 1 15278 10349 1568 9965 24168;24169 27950;27951 27951 2 ITAEEMYDIFGK Unmodified 1415.6643 0.66426794 327 A0A1W2P7L7;P59708 Sf3b6 Splicing factor 3B subunit 6 yes no 0 0 0 0 7 0 1 85.623 85.623 3 0.052765 31313 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.737 11.886 0 0 20.558 0 0 29.848 0 0 19 0 0 28 0 0 1 0 0 1 1765.2 10350 327 9966 24170 27952 27952 1 ITAEQEEAQR Unmodified 1173.5626 0.56258006 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 35.344 35.344 2 2.188E-05 9000 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.42 89.875 60.088 106.08 146.16 221.16 156.1 38.412 56 102 148 213 158 37 1 3 3 4 3 1 62378 10351 2619 9967 24171;24172;24173;24174 27953;27954;27955;27956 27956 4 ITAHEALK Unmodified 881.49707 0.49706667 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 7 0.816 1 1 1 41.182 41.182 2;3 0.0022015 11265 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.309 33.72 1077.3 929.48 837.71 790.68 750.82 589.87 1013 955 843 782 754 560 3 3 2 3 2 2 85391 10352 1475 9968 24175;24176;24177 27957;27958;27959;27960 27957 4 ITAHLVHELR Unmodified 1187.6775 0.67749065 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 8 0 1 45.308 45.308 4 0.00082882 11691 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.379 47.572 0 29.792 0 30.604 0 39.442 0 28 0 28 0 37 0 1 0 1 0 1 2533.4 10353 2472 9969 24178 27961 27961 1 ITALDEFATK Unmodified 1107.5812 0.58119023 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.22 1 1 2 1 1 71.686 71.686 2;3 5.8628E-07 26701 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.68 68.242 345.04 355.54 316.97 417.18 362.25 156.71 324 361 315 398 361 148 3 5 4 4 4 3 190390 10354 551 9970 24179;24180;24181;24182;24183;24184 27962;27963;27964;27965;27966;27967;27968;27969 27969 8 ITASEALK Unmodified 831.47018 0.47018322 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 10 3 1 1 51.511 51.511 2 0.012445 15437 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.355 30.777 285.17 164.39 628.86 469.99 564.17 312.23 269 169 611 474 565 308 2 1 3 3 2 2 26144 10355 103 9971 24185;24186 27970;27971;27972 27971 3 ITASSSFR Unmodified 867.44503 0.4450311 2155 Q62419 Sh3gl1 Endophilin-A2 yes yes 0 0 0 0 9 0 1 43.121 43.121 2 0.030946 10077 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.214 35.604 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10356 2155 9972 24187 27973 27973 1 ITAVPTLLK Unmodified 954.61137 0.61136815 2934 Q9CQM5 Txndc17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 0 11.3 1.25 1 1 1 71.156 71.156 2 0.0012583 21131 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.2 26.275 280.57 183.98 118.25 277.07 235.76 299.21 263 185 120 264 241 287 3 2 1 3 2 3 80570 10357 2934 9973 24188;24189;24190 27974;27975;27976 27974 3 ITCLCQVPQNAANR Unmodified 1643.7872 0.78719381 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 53.277 53.277 3 0.0086907 15368 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.518 12.691 29.694 0 58.797 36.937 0 49.036 28 0 56 37 0 46 1 0 1 1 0 1 3447.7 10358 2382 9974 24191 27977 27977 1 ITDAFSSLAK Unmodified 1051.555 0.55497548 1659 P59016 Vps33b Vacuolar protein sorting-associated protein 33B yes yes 0 0 0 0 9 0 1 71.46 71.46 3 0.00095812 23377 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.943 35.119 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 2401.4 10359 1659 9975 24192 27978 27978 1 ITDFGMCK Unmodified 970.42522 0.42522364 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 13 0 1 62.668 62.668 2 0.054124 22478 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.962 26.862 0 145.62 135.9 129.35 246.5 263.73 0 139 139 130 250 254 0 1 1 1 1 1 10763 10360 1783 9976 24193 27979 27979 1 ITDLYTDLR Unmodified 1108.5764 0.57643921 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 69.411 69.411 2 0.0042837 24469 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.308 26.871 237.5 162.9 154.36 380.27 387.42 363.11 222 158 158 363 399 351 2 2 2 3 3 3 76502 10361 2148 9977 24194;24195;24196 27980;27981;27982 27981 3 ITDMALEYVACDLHR Unmodified 1805.844 0.84403999 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 6 0 1 79.632 79.632 3 0.00037191 29322 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.038 41.104 39.335 16.772 47.353 27.254 28.036 0 37 19 46 28 28 0 1 1 1 1 1 0 2785.8 10362 547 9978 24197 27983 27983 1 ITDNELELYK Unmodified 1236.6238 0.62378333 961 E9QM38;P55012 Slc12a2 Solute carrier family 12 member 2 yes no 0 0 0 0 5 0 1 67.421 67.421 3 0.018781 24214 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.559 12.048 20.058 18.196 39.923 0 27.631 48.248 19 19 38 0 28 46 1 1 1 0 1 1 2555 10363 961 9979 24198 27984 27984 1 ITDPSSSR Unmodified 861.41921 0.41921028 2605 Q8K356;Q9WUC3 Ly6h Lymphocyte antigen 6H yes no 0 0 0 0 7.75 3.11 1 1 1 1 33.487 33.487 2 9.047E-07 7569 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 168.08 83.381 325.33 329.64 387.12 391.94 614.32 532.47 306 334 373 379 622 512 3 3 2 3 4 3 129150 10364 2605 9980 24199;24200;24201;24202 27985;27986;27987;27988 27986 4 ITELFAVALPQLLAK Unmodified 1625.9756 0.97562974 455 A2AFF6;O35638 Stag2 Cohesin subunit SA-2 yes no 0 0 0 0 12 0 1 107.01 107.01 3 0.00029664 29483 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.285 44.412 11.769 6.6544 0 0 0 0 11 7 0 0 0 0 1 1 0 0 0 0 800.57 10365 455 9981 24203 27989 27989 1 ITEQLIEAINNGDFEAYTK 2 Deamidation (N) 2170.0318 0.031760224 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCI7 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 2 0 0 5 0 1 89.241 89.241 3 0.0031965 34090 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.588 37.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10366 2818 9982 24204 27990 27990 1000;1001 1 ITEQLIEAINNGDFEAYTK Unmodified 2168.0637 0.063729054 2818 Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCI7 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 6 0 1 92.825 92.825 3 4.2677E-05 35140 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.588 41.961 9.5038 14.023 13.869 8.7425 14.242 0 9 14 14 9 14 0 1 1 1 1 1 0 2085.9 10367 2818 9982 24205 27991 27991 1 ITESEEVVSR Unmodified 1147.5721 0.57208211 1580 P48678;D3YUF7 Lmna Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 3 0.816 1 1 1 45.236 45.236 2 2.5321E-05 14391 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.31 92.127 108.56 168.38 119.16 66.079 183.88 191.96 102 167 121 65 185 185 2 3 2 1 3 3 34617 10368 1580 9983 24206;24207;24208 27992;27993;27994 27993 3 ITEYLCEPLR Unmodified 1292.6435 0.64347291 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 6.5 0.5 1 1 69.136 69.136 2 0.00040068 24350 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.665 75.763 129.25 59.652 47.398 49.105 128.07 164.77 121 65 46 46 130 158 2 2 1 1 2 2 9732.8 10369 1203;3123 9984 24209;24210 27995;27996 27995 2 ITEYLCEPLRK Unmodified 1420.7384 0.73843593 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 1 8.5 0.5 1 1 63.924 63.924 3 0.00021155 19680 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.767 54.654 317.08 180.25 115.82 280.04 317.76 240.96 297 185 120 268 324 232 3 2 1 3 3 2 59308 10370 1203;3123 9985 24211;24212 27997;27998;27999 27999 3 ITEYMEHVYLIHK Unmodified 1674.844 0.84396364 2476 Q8BX94 Osbpl2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 0 8 0 1 68.037 68.037 4 0.047643 22405 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34 6.9713 39.224 26.177 58.053 17.307 0 49.036 37 28 56 19 0 46 1 1 1 1 0 1 2003.3 10371 2476 9986 24213 28000 28000 1 ITFDDYIACCVK Unmodified 1503.6738 0.67378676 2209 Q6P069 Sri Sorcin yes yes 0 0 0 0 9.33 2.62 1 1 1 75.425 75.425 3 0.00019819 26544 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.695 61.732 69.24 132.71 56.188 105.53 138.57 57.603 65 130 56 102 139 56 1 2 1 2 2 1 11074 10372 2209 9987 24214;24215;24216 28001;28002;28003 28001 3 ITFEGNVAFR Unmodified 1152.5928 0.59275797 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 8 0 1 65.242 65.242 2 0.018524 21055 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.102 34.93 59.711 74.71 0 71.045 0 0 56 74 0 65 0 0 1 1 0 1 0 0 3884.1 10373 1226 9988 24217 28004 28004 1 ITFHWGK Unmodified 887.46537 0.46537261 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 11.5 1.12 1 1 1 1 59.37 59.37 3 0.0053289 14002 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.626 47.277 711.57 584.27 683.41 411.57 429.44 255.05 669 603 676 404 437 245 3 3 3 3 3 1 221230 10374 644 9989 24218;24219;24220;24221 28005;28006;28007;28008;28009 28008 5 ITFLPLAR Unmodified 929.56984 0.56983769 2109 Q61097;Q5SXE4;A0A2I3BR95;A0A140LHS5 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 0 6.5 5.5 1 1 74.707 74.707 2 0.0056526 19593 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.37 67.975 178.65 107.43 0 209.43 139 232.69 167 111 0 194 148 222 2 1 0 2 1 2 29882 10375 2109 9990 24222;24223 28010;28011 28011 2 ITFTGEADQAPGVEPGDIVLLLQEK Unmodified 2639.3694 0.36941313 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 6 0.816 1 1 1 97.396 97.396 3;4 2.1485E-17 35700 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.837 63.583 8.5064 39.488 42.712 38.563 49.214 38.264 8 38 42 37 50 37 1 2 2 2 3 2 10567 10376 3279 9991 24224;24225;24226 28012;28013;28014 28012 3 ITFTPSSGISSEVTVPR Unmodified 1776.9258 0.92577901 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.6 3.88 1 1 1 1 1 69.174 69.174 2;3 2.5216E-46 23616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 172.91 139.13 69.025 181.7 204.78 107.7 149.93 166.93 65 176 204 107 149 158 2 2 4 3 2 4 100140 10377 2479 9992 24227;24228;24229;24230;24231 28015;28016;28017;28018;28019 28016 5 ITFVDFIAYDVLER Unmodified 1699.8821 0.88212328 696 D3YVP5;Q80W21 Gstm7 Glutathione S-transferase Mu 7 yes no 0 0 0 0 8 0 1 104.23 104.23 3 0.0013489 36376 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.328 38.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1168.9 10378 696 9993 24232 28020 28020 1 ITGCTSPGK Unmodified 919.44332 0.44331654 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 7.5 0.5 1 1 40.939 40.939 2 0.0010453 10336 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.64 55.283 0 49.225 46.819 0 38.702 0 0 47 46 0 37 0 0 1 1 0 1 0 7615.9 10379 1824 9994 24233;24234 28021;28022 28021 2 ITGEAFVQFASQELAEK Unmodified 1866.9363 0.9363437 3401 Q9Z2X1;J3QMT0;J3QM80 Hnrnpf Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 0 8.25 2.77 1 2 1 90.018 90.018 3;4 2.4195E-06 33276 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.007 62.932 39.582 9 20.022 29.411 0 29.848 37 9 19 28 0 28 2 1 1 2 0 1 6219.2 10380 3401 9995 24235;24236;24237;24238 28023;28024;28025;28026 28024 4 ITGEMVLSFPAGITR Unmodified 1590.844 0.84396364 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 9 0 1 81.19 81.19 2 1.2081E-15 27947 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.631 31.332 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10381 2691;1024 9996 24239 28027 28027 1 ITGTNAEVMPAQWEFQIGPCEGIR Unmodified 2703.2785 0.27850641 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 8.29 3.1 1 2 1 1 2 83.329 83.329 3;4 1.7953E-16 31754 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.722 72.001 178.44 62.7 115 97.15 142.58 73.69 169 62 113 94 143 72 7 2 5 4 6 4 98335 10382 1383 9997 24240;24241;24242;24243;24244;24245;24246 28028;28029;28030;28031;28032;28033;28034;28035;28036 28028 9 ITHTGQVYDEK Unmodified 1289.6252 0.62518031 1610 P52503;A0A1Y7VM38;A0A1Y7VKP8 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 0 9 4 1 1 40.641 40.641 3 2.3864E-06 11750 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.17 77.002 216.98 89.16 246.4 177.68 0 0 204 93 241 176 0 0 2 1 2 2 0 0 40701 10383 1610 9998 24247;24248 28037;28038 28037 2 ITHTGQVYDEKDYR Unmodified 1723.8166 0.81656291 1610 P52503;A0A1Y7VM38;A0A1Y7VKP8 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 1 5 0 1 41.837 41.837 4 0.055046 11993 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.392 17.334 0 58.337 74.587 44.478 72.027 97.083 0 56 74 46 74 93 0 1 1 1 1 1 3545.9 10384 1610 9999 24249 28039 28039 1 ITHYFIDLNK Unmodified 1262.6659 0.66592292 2386 Q8BGT8;F7D3N3;F6U6Z2 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 11.5 1.5 1 1 66.081 66.081 3 0.0020076 23952 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.19 48.458 88.789 53.597 0 60.05 135.56 106.98 83 56 0 56 139 102 1 1 0 1 2 1 18931 10385 2386 10000 24250;24251 28040;28041 28041 2 ITHYFIDLNKK Unmodified 1390.7609 0.76088593 2386 Q8BGT8;F7D3N3;F6U6Z2 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 1 11 0.816 1 1 1 61.329 61.329 4 0.00063232 16753 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.942 43.612 542.3 608.6 1099 722.58 668.55 795.81 512 618 1074 713 687 757 2 3 3 3 3 3 64406 10386 2386 10001 24252;24253;24254 28042;28043;28044;28045 28042 4 ITIPDLTDVNAIDR Unmodified 1554.8253 0.82533668 1774 P63137 Gabrb2 Gamma-aminobutyric acid receptor subunit beta-2 yes yes 0 0 0 0 6 0 1 80.399 80.399 2 0.0046474 29666 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.435 23.96 0 19.892 19.365 0 0 40.508 0 19 19 0 0 38 0 1 1 0 0 1 1604.4 10387 1774 10002 24255 28046 28046 1 ITIPVQTFSNLQIR Unmodified 1628.925 0.92499115 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 9.83 4.06 1 1 1 2 1 80.476 80.476 2;3 3.5937E-41 21966 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 179.83 154.6 298 364.51 441.16 463.15 664.77 501.68 279 362 431 445 667 482 6 6 6 7 9 6 525750 10388 1304 10003 24256;24257;24258;24259;24260;24261 28047;28048;28049;28050;28051;28052;28053;28054;28055;28056;28057;28058 28057 12 ITIPVQTFSNLQIR Deamidation (N) 1629.909 0.90900673 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 1 0 0 9 0 1 82.523 82.523 3 0.0019876 28466 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.499 43.46 20.265 0 20.456 0 0 9.594 19 0 19 0 0 9 1 0 1 0 0 1 3927.4 10389 1304 10003 24262 28059 28059 359 1 ITISDCGQL Unmodified 1005.4801 0.48009598 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 8 3.56 1 1 1 68.021 68.021 2 0.00068097 23839 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.21 78.182 147.73 118.95 312.04 250.75 207.69 271.23 139 120 306 250 213 260 2 2 3 3 2 3 144640 10390 1404 10004 24263;24264;24265 28060;28061;28062 28061 3 ITITNDK Unmodified 803.43888 0.43888309 1762;1397;1407;1394 P17156;P63017;Q504P4;Q61696;P17879;P16627 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 9.12 2.42 1 1 2 2 2 49.279 49.279 2;3 0.0053831 15139 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.81 49.451 1059.9 956.48 1520.2 1630.9 2061.6 1384.5 996 967 1510 1605 2079 1337 6 6 8 9 8 8 586020 10391 1397;1762;1407;1394 10005 24266;24267;24268;24269;24270;24271;24272;24273 28063;28064;28065;28066;28067;28068;28069;28070;28071;28072 28063 10 ITITNDKGR Deamidation (N) 1017.5455 0.54547343 1762;1397;1407;1394 P17156;P63017;Q504P4;Q61696;P17879;P16627 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 1 0 1 7 1 1 1 44.453 44.453 3 0.017053 11270 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.096 45.207 247.34 198.71 99.711 272.57 301.29 273.89 232 204 102 260 309 265 2 2 1 2 2 2 21999 10392 1397;1762;1407;1394 10006 24274;24275 28073;28074 28074 461 2 ITITNDKGR Unmodified 1016.5615 0.56145784 1762;1397;1407;1394 P17156;P63017;Q504P4;Q61696;P17879;P16627 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 1 9 0 1 41.302 41.302 3 0.0025356 9310 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.895 44.677 437.42 405.97 619.3 487.73 0 504.22 413 419 617 480 0 473 1 1 1 1 0 1 32228 10393 1397;1762;1407;1394 10006 24276 28075 28075 1 ITITNDQNR Unmodified 1073.5465 0.54653606 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 6.5 0.5 1 1 41.829 41.829 2 6.3266E-18 11557 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 184.04 141.2 132.75 195.05 207.87 215.88 299.36 162.16 125 195 209 214 301 157 2 3 2 3 3 2 18959 10394 1419 10007 24277;24278 28076;28077;28078 28077 3 ITLATVK Unmodified 744.47454 0.47454032 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 9.5 0.5 1 1 58.386 58.386 2 0.026936 17119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.142 17.004 178.69 0 84.572 105.17 67.88 185.68 167 0 83 102 74 176 2 0 1 1 1 2 15447 10395 1567 10008 24279;24280 28079;28080 28079 2 ITLDNAYMEK Unmodified 1196.5747 0.57472465 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 0 8.5 2.69 1 1 1 1 64.966 64.966 2;3 7.8313E-09 23324 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.07 86.763 315.86 321.96 88.311 465.03 332.6 310.47 296 324 93 436 343 296 4 5 2 5 4 3 124270 10396 1609 10009 24281;24282;24283;24284 28081;28082;28083;28084;28085 28085 5 ITLEDVISHR Unmodified 1181.6404 0.64043645 2003 Q3UQ44 Iqgap2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 0 7 0 1 62.614 62.614 3 0.015529 20460 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.452 31.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10397 2003 10010 24285 28086 28086 1 ITLPVDFVTADK Unmodified 1317.718 0.71801807 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 82.413 82.413 2;3 5.3674E-13 29137 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.56 74.549 69.05 93.242 63.057 118.57 134.53 47.873 65 93 65 115 135 47 2 3 2 4 3 2 29865 10398 1334 10011 24286;24287;24288;24289 28087;28088;28089;28090 28088 4 ITLPVDFVTADKFDENAK Unmodified 2022.031 0.030972363 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 1 8.11 2.02 2 2 2 2 1 81.414 81.414 3;4 1.0138E-25 28630 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.69 109.88 1018.2 1024.6 988.91 1017 842.18 1068.6 958 1043 997 988 864 1025 8 10 8 8 6 8 607860 10399 1334 10012 24290;24291;24292;24293;24294;24295;24296;24297;24298 28091;28092;28093;28094;28095;28096;28097;28098;28099;28100;28101 28095 11 ITLPVDFVTADKFDENAK Deamidation (N) 2023.015 0.014987947 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 1 0 1 8.67 2.05 2 2 1 1 82.842 82.842 3;4 1.1821E-12 29512 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.46 100.16 257.86 137.21 188.6 303.64 233.49 379.23 241 139 186 287 241 362 3 4 3 4 3 4 24533 10400 1334 10012 24299;24300;24301;24302;24303;24304 28102;28103;28104;28105;28106;28107 28105 403 6 ITMPVIFNEPLSFLQR Unmodified 1904.023 0.022990634 2021 Q3V156;Q91XL9;D3Z7I9;D3YZ66 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 0 11 0.816 1 1 1 98.312 98.312 3 1.1812E-05 32368 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.2 83.061 35.12 23.332 28.719 0 8.3971 39.202 33 23 28 0 9 37 2 1 2 0 1 2 21799 10401 2021 10013 24305;24306;24307 28108;28109;28110 28109 3 ITNSLTVLCSEK Unmodified 1363.7017 0.70171607 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 8 0 1 67.745 67.745 3 0.00021579 22284 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.496 50.865 49.225 26.473 0 0 0 0 46 28 0 0 0 0 1 1 0 0 0 0 3867.4 10402 1972 10014 24308 28111 28111 1 ITNVSAIIKPYPK Unmodified 1442.8497 0.84970094 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 1 12 0 1 65.417 65.417 3 9.2567E-11 16112 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.7 106.76 128.45 60.498 0 89.067 87.854 155.26 120 65 0 83 93 148 1 1 0 1 1 1 18113 10403 240 10015 24309 28112 28112 1 ITNVSEEDSGEYFCLASNK Unmodified 2161.9474 0.94737867 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 1 70.637 70.637 3 0.00025708 25674 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.15 37.656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10404 20;2354 10016 24310 28113 28113 1 ITNVSEEDSGEYFCLASNK Deamidation (N) 2162.9314 0.93139425 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 1 0 0 6 0 1 70.603 70.603 3 0.0020017 25069 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.392 28.854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10405 20;2354 10016 24311 28114 28114 4 1 ITPAHDQNDYEVGQR Unmodified 1741.802 0.80197548 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 4 0 1 39.96 39.96 3 2.1762E-07 11488 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.23 94.996 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2308.7 10406 3383 10017 24312 28115 28115 1 ITPELLTR Unmodified 941.55458 0.55458155 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7 0.816 1 1 1 60.548 60.548 2 0.006133 18929 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.22 69.193 0 186.39 264.14 215.1 344.7 396.31 0 176 252 203 352 381 0 2 2 2 3 3 169250 10407 1055 10018 24313;24314;24315 28116;28117;28118;28119 28119 4 ITPENLPQILLQLK Unmodified 1618.9658 0.96579333 2602 Q8K310;A0A087WSU2;A0A087WQD6 Matr3 Matrin-3 yes no 0 0 0 0 10.7 1.25 1 2 2 1 96.708 96.708 2;3 3.5576E-08 38784 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.12 83.057 59.729 29.792 60.394 66.673 57.278 67.656 56 28 56 61 56 65 2 1 1 2 1 2 67453 10408 2602 10019 24316;24317;24318;24319;24320;24321 28120;28121;28122;28123;28124;28125 28125 6 ITPFEEK Unmodified 862.44363 0.44363412 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 57.661 57.661 2;3 0.0058711 19687 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.9 76.896 3055.2 2013.2 3454 2499.3 2919.6 3229.9 2876 2077 3421 2523 2982 3107 7 6 7 6 6 6 815610 10409 1327 10020 24322;24323;24324;24325;24326 28126;28127;28128;28129;28130;28131;28132 28132 7 ITPIQSK Unmodified 785.4647 0.46470391 3338 Q9WUR9;F6TEU8 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 10 0 1 48.428 48.428 2 0.02823 11049 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.696 32.192 48.999 0 60.345 0 51.016 67.834 46 0 56 0 51 65 1 0 1 0 1 1 5749.5 10410 3338 10021 24327 28133 28133 1 ITPSYVAFTPEGER Unmodified 1565.7726 0.77257283 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 8.5 2.69 1 1 1 1 65.156 65.156 2;3 0.020505 22439 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.237 24.348 127.56 109.89 272.58 33.722 176.64 220.95 120 111 260 37 176 212 2 3 4 1 3 4 37116 10411 1419 10022 24328;24329;24330;24331 28134;28135;28136;28137 28134 4 ITPTELPK Unmodified 897.51713 0.51713341 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9 Itsn1 Intersectin-1 yes no 0 0 0 0 7 0 1 56.682 56.682 2 0.031071 17670 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.692 12.877 0 38.394 58.288 0 65.345 77.019 0 37 56 0 65 74 0 1 1 0 1 1 2861.3 10412 876 10023 24332 28138 28138 1 ITQAAMETIYLCK Unmodified 1540.7629 0.76293612 3056 Q9D394 Rufy3 Protein RUFY3 yes yes 0 0 0 0 9 0 1 76.346 76.346 3 0.00046796 25638 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.234 40.799 49.128 45.631 0 71.045 0 88.478 46 46 0 65 0 83 1 1 0 1 0 1 4057.8 10413 3056 10024 24333 28139 28139 1 ITQDDDVICTTEYSR Unmodified 1814.7993 0.79925787 2103 Q61001 Lama5 Laminin subunit alpha-5 yes yes 0 0 0 0 3 0 1 57.742 57.742 3 0.059159 20205 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.341 20.175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10414 2103 10025 24334 28140 28140 1 ITQETFDAAVR Unmodified 1249.6303 0.63026569 2437 Q8BNU0;D3Z3J0 Armc6 Armadillo repeat-containing protein 6 yes no 0 0 0 0 5 0 1 57.443 57.443 2 0.019601 19531 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.353 14.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10415 2437 10026 24335 28141 28141 1 ITQLVSEQANQVLAR Unmodified 1668.9159 0.91588303 875 F8WGN6;E9Q0J5;Q9QXL2 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A yes no 0 0 0 0 8 0 1 72.932 72.932 2 0.00077629 24697 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.676 42.161 0 0 0 0 8.0307 40.279 0 0 0 0 9 38 0 0 0 0 1 1 1629.8 10416 875 10027 24336 28142 28142 1 ITQSNAILR Unmodified 1014.5822 0.58219329 1347;1584;696 P10649;A2AE89;F6WHQ7;F6Y363;A2AE91;Q8R5I6;P48774;E9PVM7;E9PV63;D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YZ29;D3YX76;P15626 Gstm1;Gm6665;Gstm4;Gstm5;Gstm7;Gstm2 Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 5;Glutathione S-transferase Mu 7;Glutathione S-transferase Mu 2 no no 0 0 0 0 9.4 2.06 1 1 1 1 1 48.842 48.842 2 1.6182E-26 13345 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 197.66 93.754 872.42 572.3 764.89 730.45 857.71 759.33 820 594 765 718 877 730 5 4 4 3 5 3 442160 10417 1347;1584;696 10028 24337;24338;24339;24340;24341 28143;28144;28145;28146;28147 28144 5 ITQSNAILR Deamidation (N) 1015.5662 0.56620887 1347;1584;696 P10649;A2AE89;F6WHQ7;F6Y363;A2AE91;Q8R5I6;P48774;E9PVM7;E9PV63;D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YZ29;D3YX76;P15626 Gstm1;Gm6665;Gstm4;Gstm5;Gstm7;Gstm2 Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 5;Glutathione S-transferase Mu 7;Glutathione S-transferase Mu 2 no no 0 1 0 0 13 0 1 51.258 51.258 2 0.036673 16928 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.652 18.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10418 1347;1584;696 10028 24342 28148 28148 197 1 ITQSSLTICFPEYTGANK Unmodified 2028.9826 0.98264196 1330 P08752 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 0 0 0 0 8 0 1 75.854 75.854 3 0.0016686 26081 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.965 33.546 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10419 1330 10029 24343 28149 28149 1 ITQVTWQK Unmodified 1002.5498 0.54983053 3230 Q9JKF6 Pvrl1 Nectin-1 yes yes 0 0 0 0 9.67 0.471 1 2 59.303 59.303 2;3 0.0067608 15667 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.954 29.909 88.02 134.35 136.83 113.77 117.39 174.67 83 134 139 111 121 167 2 3 3 2 2 3 16517 10420 3230 10030 24344;24345;24346 28150;28151;28152 28151 3 ITQYLDAGGIPR Unmodified 1302.6932 0.6932003 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 8.6 3.38 1 1 1 2 1 1 1 2 68.236 68.236 2;3 1.24E-26 22637 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 174.77 118.51 375.52 952.77 644.76 784.57 682.96 940.77 352 930 653 762 704 898 5 11 7 9 8 8 1043800 10421 1355 10031 24347;24348;24349;24350;24351;24352;24353;24354;24355;24356 28153;28154;28155;28156;28157;28158;28159;28160;28161;28162;28163;28164;28165 28159 13 ITREEVEGESLDLCLQQLYK Unmodified 2422.205 0.20499034 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 1 5.5 0.5 1 1 75.782 75.782 3 2.5697E-11 27501 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.661 57.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10422 2302 10032 24357;24358 28166;28167 28167 2 ITSCIFQLLQEAGIK Unmodified 1719.9229 0.92294224 3146 Q9DCL9;D3Z6P1 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 0 12 0 1 105.44 105.44 3 3.5087E-05 29304 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.651 55.003 0 9.576 7.574 0 0 22.386 0 9 7 0 0 21 0 1 1 0 0 2 1518.1 10423 3146 10033 24359 28168;28169 28169 2 ITSEALLVTQQLVK Unmodified 1541.9029 0.90285872 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 10 2.16 1 1 1 83.668 83.668 2;3 1.886E-25 28912 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.21 105.92 48.796 84.076 186.42 30.604 169.98 136.21 46 83 175 28 166 130 1 2 2 1 2 2 23544 10424 2264 10034 24360;24361;24362 28170;28171;28172 28171 3 ITSEELHYFVQNHFTSAR Unmodified 2178.0494 0.049416394 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 65.584 65.584 4 7.52E-08 21165 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.5 78.181 108.15 59.584 38.025 137.93 100.66 118.13 101 56 37 130 102 112 2 1 1 3 2 2 32125 10425 3117 10035 24363;24364;24365 28173;28174;28175 28174 3 ITSEGGDGATK Unmodified 1034.488 0.48801813 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 6.5 2.99 1 2 2 1 40.05 40.05 2;3 4.6547E-09 11619 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.67 69.556 182.61 181.33 84.749 234.27 309.51 268.33 171 177 83 223 315 260 3 4 1 4 5 5 45156 10426 154 10036 24366;24367;24368;24369;24370;24371 28176;28177;28178;28179;28180;28181 28178 6 ITSFEEAK Unmodified 923.46001 0.46001246 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 56.235 56.235 2 0.0018358 18381 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.03 59.689 2054.2 2086.6 2145.3 1907.6 1036.8 2485.1 1935 2121 2181 1878 1123 2359 5 6 6 6 5 7 347450 10427 1786 10037 24372;24373;24374;24375;24376 28182;28183;28184;28185;28186;28187;28188 28183 7 ITSFPESESYSYETSTK Unmodified 1954.8684 0.86838329 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 3.56 1 1 1 64.186 64.186 3 3.2432E-06 23069 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.579 78.819 306.39 154.06 312.85 167.3 288.26 239.67 288 158 306 167 287 231 4 2 4 3 3 2 47184 10428 1382 10038 24377;24378;24379 28189;28190;28191;28192 28192 4 ITSGPFEPDLYK Unmodified 1365.6816 0.68163256 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 0 6 0 1 71.259 71.259 3 0.00059031 25422 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.55 25.916 29.865 0 30.145 0 58.576 0 28 0 28 0 56 0 1 0 1 0 1 0 3131.1 10429 1599 10039 24380 28193 28193 1 ITSLAQLNAANHDAAIFPGGFGAAK Unmodified 2454.2656 0.26555718 3037 Q9D172;A0A1W2P7B6 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 10.4 1.73 1 2 2 1 2 77.245 77.245 3;4 1.2631E-34 26022 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.83 128.39 755.03 649.22 885.64 676.89 787.89 685.76 711 652 876 678 792 660 5 5 5 5 5 4 225710 10430 3037 10040 24381;24382;24383;24384;24385;24386;24387;24388 28194;28195;28196;28197;28198;28199;28200;28201 28195 8 ITSLAQLNAANHDAAIFPGGFGAAK Deamidation (N) 2455.2496 0.24957276 3037 Q9D172;A0A1W2P7B6 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 1 0 0 9 0 1 79.085 79.085 4 3.8718E-07 26933 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.303 36.228 0 78.736 0 50.278 0 0 0 74 0 46 0 0 0 1 0 1 0 0 2902 10431 3037 10040 24389 28202 28202 1060 1 ITSLEVENQNLR Unmodified 1414.7416 0.74160705 203 A0A0R4J1E2;E9QN08;Q80T06;F6ZFU0;P57776;A0A0R4J1L2;Q91VK2;D3YUQ9;D3Z7N2;D3YZT9 Eef1d Elongation factor 1-delta yes no 0 0 0 0 5.5 0.5 1 1 58.277 58.277 2;3 3.0499E-13 19965 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.25 96.29 59.39 33.883 127.34 27.962 103.48 86.591 56 37 121 28 103 84 1 1 2 1 2 2 8544.9 10432 203 10041 24390;24391 28203;28204 28203 2 ITSPLMEPSSIEK Unmodified 1430.7327 0.73268185 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 10 3 1 1 67.791 67.791 2;3 0.0002388 24794 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.716 42.579 106.47 54.9 0 0 83.495 96.755 102 56 0 0 83 93 2 1 0 0 1 1 9639.4 10433 3400 10042 24392;24393 28205;28206 28206 2 ITVNGDSSAETEELANEI Deamidation (N) 1891.8535 0.85346151 59 A0A0A6YW80;G3X8Y3;Q80UM3 Naa15 N-alpha-acetyltransferase 15, NatA auxiliary subunit yes no 0 1 0 0 2 0 1 82.183 82.183 3 0.00037804 28589 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.278 37.885 9.6281 5.7348 0 12.891 11.96 0 9 6 0 12 12 0 1 1 0 1 1 0 1183.6 10434 59 10043 24394 28207 28207 19 1 ITVNYPPYISK Unmodified 1293.6969 0.69688869 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 0 0 0 10 0.707 1 2 1 68.712 68.712 2;3 7.7462E-08 19363 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 115.33 67.044 488.32 236.6 319.72 425.65 362.61 341.13 464 243 318 410 371 324 4 3 3 4 3 3 130550 10435 1103;2192 10044 24395;24396;24397;24398 28208;28209;28210;28211;28212;28213 28212 6 ITVPDTYEAR Unmodified 1163.5823 0.58225287 240 A0A140T8I9;E9Q3L2;A0A338P7D3 Pi4ka yes no 0 0 0 0 5 0 1 54.383 54.383 2 0.0045856 18062 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.349 39.977 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10436 240 10045 24399 28214 28214 1 ITVPFLEQCPIR Unmodified 1471.7857 0.78572048 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 9 0.707 1 2 1 78.934 78.934 2;3 0.00079279 26783 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.017 55.358 20.292 28.424 0 57.767 46.807 47.106 19 28 0 56 46 46 1 2 0 2 1 2 17911 10437 3259 10046 24400;24401;24402;24403 28215;28216;28217;28218 28216 4 ITVTSEVPFSK Unmodified 1206.6496 0.64960415 1790 P67984 Rpl22 60S ribosomal protein L22 yes yes 0 0 0 0 9.33 2.62 1 1 1 66.967 66.967 3 0.0006739 21960 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.942 44.823 108.36 139.52 64.18 45.036 139.98 97.293 102 139 65 46 139 93 2 2 1 1 2 1 18819 10438 1790 10047 24404;24405;24406 28219;28220;28221 28220 3 ITVVDDADTVELCGALK Unmodified 1817.9081 0.90808003 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 5 0 1 77.258 77.258 3 1.6856E-12 28849 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.3 92.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3368 10439 1994 10048 24407 28222 28222 1 ITVVGVGQVGMACAISILGK Unmodified 1972.0849 0.084938963 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 8.67 5.44 1 1 1 95.828 95.828 3 2.0596E-11 33341 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.9 84.186 14.818 68.22 60.092 14.814 51.676 48.627 14 66 60 14 51 47 1 3 3 1 2 2 10815 10440 1389 10049 24408;24409;24410 28223;28224;28225 28223 3 ITVVIELAK Unmodified 984.62193 0.62193284 3440 yes yes 0 0 0 0 11 0 1 75.479 75.479 3 0.001533 22405 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.149 0 0 29.152 38.285 0 58.576 0 0 28 37 0 56 0 0 1 1 0 1 0 8249.3 + 10441 3440 10050 24411 28226 28226 1 ITVYEALNHPWLK Unmodified 1582.8508 0.85076357 1 A0A067XG53;O70589;F6ZQR2 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 0 10 0.816 1 1 1 75.321 75.321 3 0.00010563 22869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.803 61.329 119.55 103.66 51.217 207.87 117.84 57.966 112 102 56 195 121 56 2 2 1 3 2 1 18506 10442 1 10051 24412;24413;24414 28227;28228;28229 28228 3 ITWNVLFSPR Unmodified 1231.6713 0.67134264 3114 Q9DB72 Btbd17 BTB/POZ domain-containing protein 17 yes yes 0 0 0 0 12 0 1 82.236 82.236 2 0.0080864 22787 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.595 26.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10443 3114 10052 24415 28230 28230 1 ITWSIIR Unmodified 887.52289 0.52288749 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 9.25 4.82 1 1 1 1 69.126 69.126 2 4.8671E-05 17489 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 161.47 60.263 1626.9 1434.6 723.5 1118.2 2313.6 1310.2 1526 1457 736 1080 2304 1268 5 5 2 3 6 5 1141900 10444 1596 10053 24416;24417;24418;24419 28231;28232;28233;28234;28235;28236 28235 6 ITWSNPPAQGAR Unmodified 1296.6575 0.65748349 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 10.2 1.57 1 1 2 1 1 51.122 51.122 2;3 3.8449E-32 12119 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 179.95 133.5 538.14 455.5 471.5 447.76 325.74 446.7 506 464 473 433 329 427 6 5 5 6 4 6 181640 10445 1311 10054 24420;24421;24422;24423;24424;24425 28237;28238;28239;28240;28241;28242;28243;28244 28242 8 ITYCHLPFQSK Unmodified 1392.686 0.68600643 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 10 0 1 58.451 58.451 3 0.02132 15334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.544 26.518 196.71 141.16 182.27 189.49 272.99 234.19 185 148 185 188 277 227 1 1 1 1 1 1 7874.6 10446 2041 10055 24426 28245 28245 1 IVAATLSDPELFK Unmodified 1402.7708 0.77078192 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 8.6 1.02 1 1 2 1 80.416 80.416 2;3 6.1974E-14 28326 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.76 110.13 315.88 429.1 381.34 443.23 492.66 473.22 296 427 371 426 496 454 3 6 4 4 5 4 245650 10447 1311 10056 24427;24428;24429;24430;24431 28246;28247;28248;28249;28250;28251;28252;28253 28249 8 IVAATLSDPELFKEWK Unmodified 1845.9877 0.98765098 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 1 8.5 0.5 1 1 83.158 83.158 3;4 0.005723 28639 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.325 38.28 0 48.944 20.558 40.441 38.702 0 0 46 19 37 37 0 0 1 1 1 1 0 9992 10448 1311 10057 24432;24433 28254;28255 28255 2 IVADFSASVK Unmodified 1035.5601 0.56006086 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 8.5 0.5 1 1 67.525 67.525 2 0.014535 21322 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.161 16.714 0 68.44 43.082 129.05 34.021 118.42 0 65 46 121 37 112 0 1 1 2 1 2 44699 10449 1925 10058 24434;24435 28256;28257 28257 2 IVADKDYSVTANSK Unmodified 1509.7675 0.76748745 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 1 7.2 3.52 2 1 1 2 2 1 1 52.171 52.171 3;4 3.113E-11 14831 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.1 96.973 1287.6 915.98 854.14 860.59 1068.2 1289 1208 947 847 845 1075 1232 7 8 5 7 6 7 232020 10450 1389 10059 24436;24437;24438;24439;24440;24441;24442;24443;24444;24445 28258;28259;28260;28261;28262;28263;28264;28265;28266;28267;28268 28263 11 IVADKDYSVTANSK Deamidation (N) 1510.7515 0.75150304 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 1 0 1 8.25 2.77 1 2 1 53.881 53.881 3;4 5.959E-21 16411 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.19 111.75 433.65 273.69 523.83 356.39 562.39 638.48 408 287 516 361 572 614 3 2 4 3 3 4 37143 10451 1389 10059 24446;24447;24448;24449 28269;28270;28271;28272 28271 456 4 IVADQLCAK Unmodified 1016.5325 0.5324659 2982 Q9CX00 Ist1 IST1 homolog yes yes 0 0 0 0 8 0 1 56.511 56.511 2 0.050636 16953 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.563 13.742 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10452 2982 10060 24450 28273 28273 1 IVAEEFLK Unmodified 947.53278 0.53278348 1663 P59999;Q3TX55;E9PWA7 Arpc4 Actin-related protein 2/3 complex subunit 4 yes no 0 0 0 0 6.5 0.5 1 1 71.684 71.684 2 0.0056969 25524 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 51.21 256.57 206.58 164.45 149.7 191.03 146.11 241 213 158 139 194 139 2 2 1 1 2 1 63214 10453 1663 10061 24451;24452 28274;28275 28274 2 IVALDLR Unmodified 798.49634 0.49633839 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 0 9 0 1 64.496 64.496 2 0.049827 19958 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.592 26.552 0 0 60.592 0 0 78.884 0 0 56 0 0 74 0 0 1 0 0 1 9259.3 10454 2465 10062 24453 28276 28276 1 IVALNAHTFLR Unmodified 1253.7244 0.72444085 1522;2330 P35550;Q80WS3 Fbl;Fbll1 rRNA 2'-O-methyltransferase fibrillarin;rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 no no 0 0 0 0 6.5 5.5 1 1 62.359 62.359 3 2.1136E-08 14896 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.03 59.272 78.704 101.14 124.46 0 164.22 0 74 102 121 0 157 0 1 2 2 0 2 0 23189 10455 1522;2330 10063 24454;24455 28277;28278 28278 2 IVALSSSLSNAK Unmodified 1188.6714 0.67140222 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 11.5 0.5 1 1 64.801 64.801 3 0.00063197 15864 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.864 39.072 69.047 211.34 63.618 188.58 0 0 65 204 65 176 0 0 1 2 1 2 0 0 14494 10456 2216 10064 24456;24457 28279;28280 28280 2 IVAMIAR Unmodified 772.46293 0.46292977 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 11 0 1 58.786 58.786 2 0.020245 15120 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.84 39.553 188 0 0 0 0 0 188 0 0 0 0 0 1 0 0 0 0 0 22636 10457 3249 10065 24458 28281 28281 1 IVANHIR Unmodified 821.48717 0.48717069 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 9 0 1 32.595 32.595 3 0.051994 5724 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.504 20.397 0 0 30.296 0 0 39.442 0 0 28 0 0 37 0 0 1 0 0 1 6968.9 10458 960 10066 24459 28282 28282 1 IVAPISDSPKPPPQR Unmodified 1600.8937 0.89369102 2911 Q9CQ60;Q8CBG6;D3Z4X1 Pgls 6-phosphogluconolactonase yes no 0 0 0 1 8.5 0.5 1 1 50.822 50.822 3 0.00015689 14276 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.373 49.516 48.999 0 60.345 29.756 113.1 47.749 46 0 56 28 111 46 1 0 1 1 2 1 8298.5 10459 2911 10067 24460;24461 28283;28284 28283 2 IVAPPGGR Unmodified 765.44972 0.44972255 2212;1158;1850;836 O08553;Q3TT92;E9PWE8;Q62188;P97427;Q6P1J1 Dpysl2;Dpysl3;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 41.172 41.172 2 3.7095E-24 9711 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 196.32 130.42 2943.1 2281.1 3297.3 2973.3 3766.5 3903.9 2765 2328 3310 2932 3823 3763 5 5 8 5 7 8 1297700 10460 1158;836;1850;2212 10068 24462;24463;24464;24465;24466;24467 28285;28286;28287;28288;28289;28290;28291;28292;28293 28287 9 IVATKPLYVALAQR Unmodified 1541.9293 0.92934824 1484 P29341;Q9D4E6;Q62029 Pabpc1;Pabpc6;Pabpc2 Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 1 1 0 2 68.406 68.406 3;4 5.4087E-11 23293 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 121.56 97.469 148.57 91.09 200.8 65.001 213.91 171.92 140 93 194 65 213 167 3 2 3 1 3 3 39125 10461 1484 10069 24468;24469 28294;28295;28296 28295 3 IVAVFKPK Unmodified 900.57967 0.57967409 1908 Q2TBE6 Pi4k2a Phosphatidylinositol 4-kinase type 2-alpha yes yes 0 0 0 1 1 0 1 62.545 62.545 3 0.036767 20901 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.788 31.639 59.485 54.654 122.38 111.43 137.97 67.233 56 56 121 111 139 65 1 1 2 2 2 1 4631.8 10462 1908 10070 24470 28297;28298 28298 2 IVDDEEYEK Unmodified 1138.503 0.50299949 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 2 0 1 52.928 52.928 2 0.0052286 17410 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.213 2.8749 39.295 26.375 45.91 46.734 42.936 88.319 37 28 46 46 46 84 1 1 1 1 1 1 5456.7 10463 2619 10071 24471 28299 28299 1 IVDDEEYEKK Unmodified 1266.598 0.59796251 2619 Q8K596 Slc8a2 yes yes 0 0 0 1 4 0 1 50.119 50.119 3 0.0012362 16321 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.963 61.581 0 0 105.75 103.56 86.492 175.55 0 0 102 102 93 167 0 0 1 1 1 1 7496.5 10464 2619 10072 24472 28300 28300 1 IVDILYATDEGFVIPDEGGPQEEQEEY Unmodified 3054.387 0.38697327 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 13 0 1 107.99 107.99 4 0.011556 43984 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.819 25.315 9.657 0 0 9.837 0 0 9 0 0 9 0 0 1 0 0 1 0 0 1269.3 10465 2115 10073 24473 28301 28301 1 IVDQNSK Unmodified 802.41848 0.418482 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 7 0 1 40.261 40.261 2 0.032145 9998 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.568 36.394 39.29 0 69.016 25.056 76.253 0 37 0 65 28 74 0 1 0 1 1 1 0 2820.1 10466 1868 10074 24474 28302 28302 1 IVDSGVQTDDEETADR Unmodified 1748.7701 0.77006623 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 1.5 0.5 1 1 47.244 47.244 3 1.1443E-11 14931 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.54 89.061 29.679 27.151 38.255 20.062 85.604 8.5243 28 28 37 19 83 9 1 1 1 1 2 1 16650 10467 3285 10075 24475;24476 28303;28304 28304 2 IVDTIDIVR Unmodified 1042.6023 0.60226003 1215 O35954;D3YXW5 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes no 0 0 0 0 6 0 1 68.199 68.199 2 0.010915 23905 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.016 24.77 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10468 1215 10076 24477 28305 28305 1 IVDVIGEK Unmodified 871.50148 0.50148335 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 10 3 1 1 64.576 64.576 2 0.011028 21543 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.099 34.126 236.54 99.88 194.91 300.03 225.05 157.77 222 102 188 289 223 148 2 1 1 2 1 1 25611 10469 68 10077 24478;24479 28306;28307 28306 2 IVEAAENEYQTAISENYQTMSDTTFK Unmodified 2982.3441 0.34406259 1564 P47754 Capza2 F-actin-capping protein subunit alpha-2 yes yes 0 0 0 0 4 0 1 87.194 87.194 4 1.5391E-05 33164 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.498 36.767 0 0 15.551 15.245 11.852 0 0 0 15 15 12 0 0 0 1 1 1 0 2998.7 10470 1564 10078 24480 28308 28308 1 IVEANPLLEAFGNAK Unmodified 1584.8512 0.8511575 831 E9Q175;E9Q3L1;E9PVU0;E9Q174;V9GXM4;V9GX76;Q64331 Myo6 Unconventional myosin-VI yes no 0 0 0 0 8 0 1 85.54 85.54 3 1.6882E-05 30675 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.706 50.268 0 0 40.034 0 28.291 29.041 0 0 37 0 28 28 0 0 1 0 1 1 2794.4 10471 831 10079 24481 28309 28309 1 IVEDEPNKICEADR Unmodified 1686.7883 0.78829925 3186 Q9ERK4;E9Q1T9;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 1 3.5 0.5 1 1 49.423 49.423 3 7.682E-05 16013 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.804 45.529 0 38.738 37.71 0 66.701 37.539 0 37 37 0 65 37 0 1 1 0 1 1 3980.6 10472 3186 10080 24482;24483 28310;28311 28311 2 IVEGILK Unmodified 770.49019 0.49019038 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 10 2.16 1 1 1 65.845 65.845 2 0.026876 23675 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.784 14.729 230.43 298.51 372.11 327.04 261.12 412.55 217 301 375 324 268 394 1 2 2 2 1 2 39189 10473 1749 10081 24484;24485;24486 28312;28313;28314 28314 3 IVEILLMK Unmodified 957.59328 0.59327524 385 A0A2I3BRL8;Q91VM5 Rbmxl1 RNA binding motif protein, X-linked-like-1 yes no 0 0 0 0 12 0 1 89.804 89.804 2 0.010179 25588 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.299 31.617 39.701 0 0 80.882 0 0 37 0 0 74 0 0 1 0 0 1 0 0 2413.8 10474 385 10082 24487 28315 28315 1 IVEIPFNSTNK Deamidation (N) 1261.6554 0.65541781 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 0 6.33 0.471 2 1 73.206 73.206 3 0.0096931 26006 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.172 25.226 79.836 35.759 77.036 78.373 90.342 97.127 75 38 74 75 93 93 3 2 2 2 3 2 11522 10475 2699 10083 24488;24489;24490 28316;28317;28318 28316 971;972 3 IVEIPFNSTNK Unmodified 1260.6714 0.67140222 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 69.449 69.449 2;3 1.0204E-08 23088 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.69 89.466 445.58 186.93 359.2 335.36 226.69 440.97 418 186 352 315 232 417 5 3 4 3 3 5 128310 10476 2699 10083 24491;24492;24493;24494;24495 28319;28320;28321;28322;28323;28324 28320 6 IVEIVDAITTTAQSHQR Unmodified 1880.9956 0.99558991 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 9.8 0.748 2 2 1 80.576 80.576 3;4 2.7591E-46 25278 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 172.26 127.66 206.83 202.31 291.91 239.49 134.49 431.09 195 205 288 231 140 408 4 3 4 5 3 7 130490 10477 1568 10084 24496;24497;24498;24499;24500 28325;28326;28327;28328;28329;28330;28331 28328 7 IVELISR Unmodified 828.5069 0.50690308 2058 Q5SRX1;Q5SXA5;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 13 0 1 62.956 62.956 2 0.039057 22553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.451 5.8347 59.409 43.648 77.15 0 0 99.138 56 46 74 0 0 93 1 1 1 0 0 1 9549.9 10478 2058 10085 24501 28332 28332 1 IVELMGR Unmodified 816.45276 0.45275902 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8 0 1 61.115 61.115 2 0.031981 19088 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.699 43.847 118.64 90.952 0 61.208 0 0 111 93 0 56 0 0 1 1 0 1 0 0 10570 10479 2179 10086 24502 28333 28333 1 IVEMSTSK Unmodified 893.45282 0.4528186 51 A0A0A0MQM0;P63242;Q8BGY2 Eif5a;Eif5a2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 0 10.5 2.5 1 1 52.108 52.108 2 0.0067857 17180 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.29 27.066 275.97 281.41 447.53 303.53 342.34 377.19 261 289 443 308 353 363 2 2 2 2 2 2 29577 10480 51 10087 24503;24504 28334;28335 28335 2 IVENSEAVTEILNNAELLK Unmodified 2098.1158 0.11576462 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 6.5 0.5 1 1 93.342 93.342 3 3.2385E-05 34592 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.024 40.107 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 2543.7 10481 2418 10088 24505;24506 28336;28337 28337 2 IVEPYIAWGYPNLK Unmodified 1661.8817 0.88172935 1007 F6XI62;P14148 Rpl7 60S ribosomal protein L7 yes no 0 0 0 0 9.5 0.5 1 1 85.174 85.174 3 0.0046854 27162 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.704 34.143 0 0 0 77.416 45.846 0 0 0 0 74 46 0 0 0 0 2 1 0 6317 10482 1007 10089 24507;24508 28338;28339 28339 2 IVESYQIR Unmodified 1006.5447 0.54474515 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 8.67 3.09 1 1 1 52.297 52.297 2 0.010851 16517 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.815 55.612 539.74 336.58 431.94 549.34 514.4 459.94 507 351 436 535 531 441 3 2 2 3 3 2 92830 10483 1362 10090 24509;24510;24511 28340;28341;28342 28340 3 IVEVLLMK Unmodified 943.57763 0.57762518 3339 Q9WV02;A2AFI3;A2AFI4 Rbmx RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed yes no 0 0 0 0 10 0 1 85.553 85.553 2 0.0094705 27408 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.15 48.461 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 0 1724.1 10484 3339 10091 24512 28343 28343 1 IVFADGNFWGR Unmodified 1280.6302 0.63020611 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 79.269 79.269 2 0.00058022 26998 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.325 50.726 88.139 61.504 152.23 84.612 0 59.696 83 65 148 83 0 56 1 1 2 1 0 1 23979 10485 1489 10092 24513;24514 28344;28345 28344 2 IVFDSIDNLEAAPHDIGHVK Unmodified 2189.1117 0.1116823 714 D3YXG2;Q9D997;Q9QZ08 Nagk N-acetyl-D-glucosamine kinase yes no 0 0 0 0 6 0 1 73.247 73.247 4 4.7963E-09 26327 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.021 63.407 59.694 25.015 44.971 67.321 55.484 0 56 28 46 65 56 0 1 1 1 1 1 0 3772.9 10486 714 10093 24515 28346 28346 1 IVFEDGNISVSK Unmodified 1306.6769 0.67688153 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.2 2.48 1 2 1 1 70.675 70.675 2;3 1.3492E-13 26052 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.49 84.702 295.91 408.82 382.83 381.83 277.99 349.74 279 409 389 375 284 334 6 8 7 8 4 6 108840 10487 1850;2212 10094 24516;24517;24518;24519;24520 28347;28348;28349;28350;28351;28352;28353;28354 28354 8 IVFENPDPSDGFVLIPDLK Unmodified 2114.0936 0.093572619 3103 Q9DAR7;Q3TBW9 Dcps m7GpppX diphosphatase yes no 0 0 0 0 7.5 0.5 1 1 97.078 97.078 3 0.0012621 34935 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.534 25.432 50.231 17.895 18.489 34.268 37.172 34.117 47 19 19 33 37 33 2 1 1 2 1 2 3324 10488 3103 10095 24521;24522 28355;28356 28356 2 IVFGNIHQIYDWHR Unmodified 1796.9111 0.91107242 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 0 10 0 1 66.341 66.341 4 0.0025419 18780 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.092 39.034 59.681 0 68.409 36.364 0 69.29 56 0 65 37 0 65 1 0 1 1 0 1 2258.6 10489 1894 10096 24523 28357 28357 1 IVFLEESSQQEK Unmodified 1435.7195 0.71947463 3307 Q9R111 Gda Guanine deaminase yes yes 0 0 0 0 8.43 3.02 1 1 2 1 2 68.218 68.218 2;3 7.5805E-66 23225 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 178.54 137 393.26 365.34 379.13 248.95 319.54 134.79 370 371 370 240 316 130 5 5 4 3 3 2 79441 10490 3307 10097 24524;24525;24526;24527;24528;24529;24530 28358;28359;28360;28361;28362;28363;28364;28365 28361 8 IVFPHGITLDLVSR Unmodified 1565.893 0.89296274 175 A0A0R4J0I9;Q91ZX7;Q3U5J2 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 11 0 1 76.786 76.786 3 0.0011889 23131 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.831 37.274 39.406 0 49.573 0 38.702 0 37 0 46 0 37 0 1 0 1 0 1 0 9130.3 10491 175 10098 24531 28366 28366 1 IVFSPEEAK Unmodified 1018.5335 0.53351176 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 61.766 61.766 2 0.0037982 21737 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.948 38.908 622.44 597.09 406.16 608.76 807.4 681.32 584 607 412 593 821 658 4 5 3 5 5 4 74101 10492 3397 10099 24532;24533;24534 28367;28368;28369;28370;28371 28371 5 IVFVPGCSVPLTIVK Unmodified 1627.9371 0.93713574 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11.5 0.5 1 1 86.544 86.544 3 0.00036866 27382 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.092 46.99 0 20.216 0 39.95 112.94 38.697 0 19 0 37 111 37 0 1 0 1 2 1 23653 10493 3025 10100 24535;24536 28372;28373 28372 2 IVFVTGNAK Unmodified 947.54402 0.54401687 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 0 8 4.97 1 1 1 62.083 62.083 2 1.8371E-05 16312 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 148.38 95.666 268.14 433.73 405 56.223 106.22 291.18 253 431 388 56 107 276 2 4 2 1 2 3 50828 10494 3089 10101 24537;24538;24539 28374;28375;28376;28377 28375 4 IVGCTHITAQTAVLIETLCALGAQCR Unmodified 2855.4456 0.44558851 2298 Q80SW1;D3Z2Q0;F7ATQ6 Ahcyl1 Putative adenosylhomocysteinase 2 yes no 0 0 0 0 11.5 0.5 1 1 90.838 90.838 4 2.9527E-20 29128 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.475 63.756 29.855 23.322 12.029 15.302 0 20.254 28 24 12 14 0 19 2 2 1 1 0 1 5705.3 10495 2298 10102 24540;24541 28378;28379 28378 2 IVGDLAQFMVQNGLSR Deamidation (N) 1747.8927 0.89270474 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 1 0 0 8 0 1 90.211 90.211 3 7.3688E-06 32703 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.574 56.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10496 974 10103 24542 28380 28380 259 1 IVGLDQVTGMTETAFGSAYK Unmodified 2087.0245 0.024506776 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 8 0 1 87.756 87.756 4 0.00024152 31770 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.865 42.419 20.387 0 0 20.252 27.359 29.067 19 0 0 19 28 28 1 0 0 1 1 1 775.83 10497 1974 10104 24543 28381 28381 1 IVGSKPLYVALAQR Unmodified 1513.898 0.89804812 549 Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9 Pabpc4 Polyadenylate-binding protein yes no 0 0 0 1 6.5 5.5 1 1 66.067 66.067 3 0.00016442 22551 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.156 51.238 269.32 165.42 220.31 241.91 270.64 80.393 253 176 224 238 272 77 2 2 2 2 2 1 19780 10498 549 10105 24544;24545 28382;28383 28382 2 IVGSNAGR Unmodified 772.41915 0.4191507 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 7.5 0.5 1 1 32.676 32.676 2 0.0078284 5961 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.44 39.124 127.56 52.664 156.26 26.035 149.02 164.18 120 56 149 28 149 158 2 1 2 1 2 2 21712 10499 1368 10106 24546;24547 28384;28385 28385 2 IVGYVLAK Unmodified 861.53239 0.53238955 593 B1AUY9;B1AUZ1;Q9CQX6;B1AUY8;Q3V4D5;B1AUY7;Q3UX61;Q9QY36 Naa10;Gm16286;Naa11 N-alpha-acetyltransferase 11;N-alpha-acetyltransferase 10 yes no 0 0 0 0 11.5 0.5 1 1 69.716 69.716 2 0.0095584 19897 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.919 74.747 49.081 0 46.533 67.149 59.675 120 46 0 46 65 60 120 1 0 1 1 1 1 25266 10500 593 10107 24548;24549 28386;28387 28386 2 IVHFIVPR Unmodified 979.59672 0.59672114 1154 L8AZD2;Q8VE11 Mtmr6 Myotubularin-related protein 6 yes no 0 0 0 0 12 0 1 56.665 56.665 3 0.0030279 12842 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.614 67.46 0 0 20.558 0 0 20.254 0 0 19 0 0 19 0 0 1 0 0 1 3757.1 10501 1154 10108 24550 28388 28388 1 IVIGYQSHADTATK Unmodified 1502.7729 0.77290718 97 A0A0G2JFB4;A0A0G2JH04;P63073 Eif4e Eukaryotic translation initiation factor 4E yes no 0 0 0 0 9 0 1 49.663 49.663 3 7.5356E-05 12974 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.415 53.675 48.663 64.845 61.83 97.964 0 0 46 65 65 93 0 0 1 1 1 1 0 0 4738.3 10502 97 10109 24551 28389 28389 1 IVILEYQPSK Unmodified 1188.6754 0.67542497 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 9 0 1 71.196 71.196 3 0.0011589 23221 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.451 36.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10503 2799 10110 24552 28390 28390 1 IVILPDYLEIAR Unmodified 1413.8232 0.82315184 1641 Q3U4W8;P56399;D3YYA5;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 9.25 2.28 1 1 1 1 88.265 88.265 2;3 8.187E-08 31077 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.13 74.785 0 68.258 81.968 86.775 96.788 20.018 0 65 84 84 97 19 0 1 2 3 3 1 42447 10504 1641 10111 24553;24554;24555;24556 28391;28392;28393;28394;28395 28393 5 IVIPLIEEASK Unmodified 1210.7173 0.71728978 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 9 2.1 1 2 1 1 83.148 83.148 2;3 1.3367E-07 28746 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.06 64.166 113.18 74.71 29.691 90.443 122.21 127.21 106 74 28 86 124 121 4 2 1 3 4 3 21027 10505 2451 10112 24557;24558;24559;24560;24561 28396;28397;28398;28399;28400 28399 5 IVISDFHLAK Unmodified 1141.6495 0.64954457 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 9.5 1.12 1 1 1 1 67.436 67.436 3 4.5886E-08 22153 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.16 96.394 277.98 197.49 0 249.76 304.7 350.26 260 195 0 232 315 334 3 2 0 2 3 3 115720 10506 1986 10113 24562;24563;24564;24565 28401;28402;28403;28404 28401 4 IVISQLNPYTLR Unmodified 1415.8136 0.81364979 672 Q80TS3;D3YU23;D3Z4S7;D3YVT9;D3YTW7;D3Z3G4;D3Z593;D3Z634;D3Z6H7;D3Z3X6;D3Z6H9;D3YWB1;D3Z4V0;D3YWR3;D3Z6J2;D3Z5M6;K3W4M8 Lphn3;Adgrl3 Latrophilin-3 yes no 0 0 0 0 12 0 1 74.48 74.48 3 0.00042644 19526 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.252 34.932 20.387 0 0 30.604 0 49.036 19 0 0 28 0 46 1 0 0 1 0 1 9444.9 10507 672 10114 24566 28405 28405 1 IVITGDAALDHDQALAQAIR Unmodified 2090.112 0.11201665 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6H2;A0A1W2P7I2 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 7.75 3.11 1 1 1 1 68.655 68.655 3 9.05E-40 24132 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.02 132.73 29.846 66.846 84.568 114.37 138.49 47.979 28 65 84 111 139 46 1 2 3 3 4 1 29633 10508 1250 10115 24567;24568;24569;24570 28406;28407;28408;28409 28407 4 IVITGDADIDHDQALAQAIK Unmodified 2106.0957 0.095697884 3345 Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 0 5.5 0.5 1 1 71.263 71.263 3;4 4.0775E-30 25316 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.77 88.285 0 58.63 57.074 0 36.688 58.649 0 56 56 0 37 56 0 1 1 0 1 1 7223.2 10509 3345 10116 24571;24572 28410;28411 28411 2 IVLATDPDADR Unmodified 1184.6037 0.60371659 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 8.33 3.4 1 1 1 56.393 56.393 2 8.3533E-17 19104 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.25 113.51 60.088 29.792 0 0 74.768 76.75 56 28 0 0 74 74 1 1 0 0 2 2 14840 10510 2513 10117 24573;24574;24575 28412;28413;28414 28414 3 IVLDNSVFSEHR Unmodified 1414.7205 0.72047768 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7 0.816 1 1 1 60.835 60.835 3 9.3415E-19 19643 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 149.23 110.05 166.87 154.59 135.93 146.69 117.5 166.95 157 158 139 139 121 158 2 2 2 2 2 2 152400 10511 2185 10118 24576;24577;24578 28415;28416;28417 28416 3 IVLDNSVFSEHR Deamidation (N) 1415.7045 0.70449327 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 6 0 1 62.859 62.859 3 0.00041123 21422 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.543 68.19 29.592 47.414 35.803 27.766 37.427 0 28 47 37 28 37 0 1 1 1 1 1 0 5089.7 10512 2185 10118 24579 28418 28418 859 1 IVLEDGTLHVTEGSGR Unmodified 1681.8635 0.8635131 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 4.33 0.471 2 1 58.93 58.93 2;3 1.8816E-45 20139 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 172.09 136.89 187.42 147.47 217.7 120.78 165.17 164.32 176 148 213 120 167 157 3 3 3 2 3 3 104770 10513 1158 10119 24580;24581;24582 28419;28420;28421;28422;28423 28421 5 IVLELFADIVPK Unmodified 1355.8064 0.80643914 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 11.5 1.12 1 1 1 1 106.81 106.81 3 4.3528E-12 29442 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.23 66.141 31.01 38.552 5.982 63.534 6.9261 17.924 29 37 6 60 7 17 3 4 1 4 1 2 13479 10514 2952 10120 24583;24584;24585;24586 28424;28425;28426;28427;28428;28429;28430 28428 7 IVLIGNAGVGK Unmodified 1039.639 0.63897988 2817 Q923S9;A0A140LHW9;D3YV16 Rab30 Ras-related protein Rab-30 yes no 0 0 0 0 11.5 0.5 1 1 66.96 66.96 2;3 0.0026218 16667 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.516 40.958 0 20.216 0 51.371 0 29.848 0 19 0 47 0 28 0 1 0 1 0 1 6996.4 10515 2817 10121 24587;24588 28431;28432 28432 2 IVLLDSSLEYK Unmodified 1278.7071 0.70711903 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 10.5 2.5 1 1 78.953 78.953 3 0.00047836 30148 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.942 47.715 49.074 56.275 0 40.441 0 59.696 46 56 0 37 0 56 1 1 0 1 0 1 10474 10516 1827 10122 24589;24590 28433;28434 28434 2 IVLSNMEK Unmodified 932.5001 0.50010314 2819 Q924B0;O55023;Q80ZJ2 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 8 0 1 60.352 60.352 3 0.034278 18796 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.283 19.884 59.958 25.749 0 29.946 34.981 68.292 56 28 0 28 37 65 1 1 0 1 1 1 2386.9 10517 2819 10123 24591 28435 28435 1 IVLVAMETWAADNK Unmodified 1559.8018 0.80176447 685 Q9R1V6;D3YUP9;D3YUQ0 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 11.5 1.12 1 1 1 1 95.236 95.236 3 6.8244E-08 30950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.24 88.522 70.673 29.152 62.695 8.3821 47.874 39.442 66 28 60 9 47 37 2 1 2 1 2 1 14218 10518 685 10124 24592;24593;24594;24595 28436;28437;28438;28439 28437 4 IVLVQSVRPGGAAMR Unmodified 1552.8872 0.88716585 872 E9Q0A3;Q68FM7;D6RGQ8;A0A1D5RLI4 Arhgef11 yes no 0 0 0 1 1 0 1 55.383 55.383 3 0.045531 17348 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.676 19.28 29.699 36.92 26.67 28.311 37.402 0 28 37 28 28 37 0 1 1 1 1 1 0 3439.1 10519 872 10125 24596 28440 28440 1 IVMAAAAK Unmodified 773.44695 0.44694536 2325 Q80VQ0;P47739 Aldh3b1;Aldh3a1 Aldehyde dehydrogenase family 3 member B1;Aldehyde dehydrogenase, dimeric NADP-preferring yes no 0 0 0 0 10 0 1 51.208 51.208 2 0.05528 12143 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.641 3.9242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10520 2325 10126 24597 28441 28441 1 IVMLVSENPLLADAAALGK Unmodified 1924.0703 0.070334757 1934 Q3TPE9 Ankmy2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 0 9 0 1 99.58 99.58 3 0.0048793 35526 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.844 14.409 20.387 0 0 30.604 0 20.254 19 0 0 28 0 19 1 0 0 1 0 1 1249.8 10521 1934 10127 24598 28442 28442 1 IVNDDQSFYADIYMEDGLIK Oxidation (M) 2364.0831 0.083143867 1158;836 O08553;Q3TT92;E9PWE8;Q62188 Dpysl2;Dpysl3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 no no 0 0 1 0 4 0 1 85.087 85.087 3 1.2377E-10 32355 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.508 84.894 30.027 3.2953 0 0 0 0 28 5 0 0 0 0 1 1 0 0 0 0 1806.8 10522 1158;836 10128 24599 28443 28443 41 1 IVNDDQSFYADIYMEDGLIK Unmodified 2348.0882 0.088229245 1158;836 O08553;Q3TT92;E9PWE8;Q62188 Dpysl2;Dpysl3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 no no 0 0 0 0 8 3.62 1 2 2 1 3 89.189 89.189 3;4 6.6185E-17 33571 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.37 102.6 231.26 120.8 430.12 329.36 208.67 421 217 120 411 325 216 400 8 5 9 9 7 10 71001 10523 1158;836 10128 24600;24601;24602;24603;24604;24605;24606;24607;24608 28444;28445;28446;28447;28448;28449;28450;28451;28452;28453;28454;28455;28456;28457;28458 28450 15 IVNDDQSFYADIYMEDGLIK Deamidation (N) 2349.0722 0.07224483 1158;836 O08553;Q3TT92;E9PWE8;Q62188 Dpysl2;Dpysl3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 no no 0 1 0 0 13 0 1 92.738 92.738 3 2.1052E-22 36995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.67 84.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10524 1158;836 10128 24609 28459 28459 217 1 IVNDNPYGNGTAIFTTNGATAR Deamidation (N) 2267.0818 0.081838734 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 1 0 0 5 0 1 71.984 71.984 3 9.4795E-06 26353 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.559 37.481 20.346 8.2041 0 20.234 28.359 0 19 9 0 19 28 0 1 1 0 1 1 0 5806.4 10525 3170 10129 24610 28460 28460 1097 1 IVNGWQVEEADDWLR Deamidation (N) 1829.8584 0.85842773 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 1 0 0 7.14 3.76 2 2 1 2 85.225 85.225 3 6.8346E-22 32461 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.37 121.11 128.72 138.75 153.94 273.6 139.63 89.544 121 139 150 260 140 84 5 5 5 6 3 2 56049 10526 2555 10130 24611;24612;24613;24614;24615;24616;24617 28461;28462;28463;28464;28465;28466;28467 28462 941 7 IVNGWQVEEADDWLR Unmodified 1828.8744 0.87441214 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 13 0 1 82.466 82.466 3 0.0019142 32020 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.03 40.834 138.66 98.247 55.691 56.696 63.398 176.21 130 102 56 56 65 167 2 2 1 1 1 2 9509.7 10527 2555 10130 24618 28468;28469 28468 2 IVNIGAVLSTR Unmodified 1141.6819 0.68190733 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 1 0 1 73.417 73.417 3 0.0054084 25035 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.7 38.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10528 468 10131 24619 28470 28470 1 IVNLLNDLYTR Unmodified 1332.7402 0.74015049 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 11.5 0.5 1 1 85.799 85.799 2 0.0021605 24040 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.276 47.59 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 8817.7 10529 1221 10132 24620;24621 28471;28472 28472 2 IVNQPSSLFGSK Unmodified 1275.6823 0.68230126 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 10 0 1 65.901 65.901 3 0.0001482 18571 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.494 53.167 49.176 36.052 0 38.504 102.97 56.758 46 37 0 37 102 56 1 1 0 1 1 1 4050.3 10530 459 10133 24622 28473 28473 1 IVNTPEVIR Unmodified 1039.6026 0.60259438 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 0 7 0 1 55.037 55.037 2 0.026934 16863 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.398 6.6468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10531 3271 10134 24623 28474 28474 1 IVNTSDVSDGILLK Unmodified 1472.8086 0.80862399 2475 Q8BX70 Vps13c Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 0 7 0 1 74.536 74.536 3 0.0060293 26033 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.964 14.358 0 78.033 42.037 68.54 0 0 0 74 46 65 0 0 0 1 1 1 0 0 2323.8 10532 2475 10135 24624 28475 28475 1 IVPGAPELLQR Unmodified 1191.6976 0.69755739 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 9.25 2.28 1 1 1 1 66.971 66.971 2;3 8.5768E-09 24341 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.06 1.1981 49.074 164.8 0 39.95 140.59 86.406 46 158 0 37 139 83 1 3 0 1 3 2 29392 10533 1670 10136 24625;24626;24627;24628 28476;28477;28478;28479 28479 4 IVPGLPLGWAK Unmodified 1149.691 0.69101545 469 A2AI52;Q80U87 Usp8 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 8 yes no 0 0 0 0 1 0 1 84.265 84.265 3 0.0079309 29648 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.268 29.804 0 9.576 0 20.234 28.359 0 0 9 0 19 28 0 0 1 0 1 1 0 779.56 10534 469 10137 24629 28480 28480 1 IVPGQFLAVDPK Unmodified 1282.7285 0.72852317 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 9 0 1 76.021 76.021 3 0.0055912 25443 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.675 34.451 39.564 27.124 0 50.278 0 59.696 37 28 0 46 0 56 1 1 0 1 0 1 5580.2 10535 2799 10138 24630 28481 28481 1 IVPLAWNPR Unmodified 1064.6131 0.61309948 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 13 0 1 70.301 70.301 2 0.0061116 26128 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.32 46.22 39.516 36.703 0 0 74.072 97.024 37 37 0 0 74 93 1 1 0 0 1 1 6306.3 10536 1226 10139 24631 28482 28482 1 IVPNFIK Unmodified 829.50617 0.5061748 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 0 0 0 11 1 1 1 69.687 69.687 2 0.0274 17624 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.163 44.124 108.2 152.25 193.87 142.63 125.49 114.75 102 153 194 139 130 111 1 2 2 1 1 1 19567 10537 985 10140 24632;24633 28483;28484 28484 2 IVPNILLEQGK Unmodified 1222.7285 0.72852317 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 10.4 1.74 2 1 3 1 1 2 76.107 76.107 2;3 6.8687E-13 23253 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.11 92.941 821.87 675.89 995.35 828.15 791.31 750.17 772 695 976 813 802 718 8 8 6 7 7 8 249680 10538 3011 10141 24634;24635;24636;24637;24638;24639;24640;24641;24642;24643 28485;28486;28487;28488;28489;28490;28491;28492;28493;28494;28495;28496 28489 12 IVPVDIYVPGCPPTAEALLYGILQLQR Unmodified 2994.6253 0.62525066 3138 Q9DC70 Ndufs7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 0 0 0 0 10.7 0.471 1 2 112.78 112.78 3;4 3.2061E-08 36240 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.55 52.275 0 5 16.23 0 22.375 18.55 0 5 15 0 22 18 0 1 1 0 1 1 14849 10539 3138 10142 24644;24645;24646 28497;28498;28499 28499 3 IVPVEITISLLK Unmodified 1323.8377 0.83773927 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 0 10.5 1.12 1 1 1 1 96.296 96.296 3 0.00043242 31440 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.153 47.391 28.657 0 19 73.981 93.649 19 28 0 19 70 93 19 2 0 1 2 3 1 12035 10540 3130 10143 24647;24648;24649;24650 28500;28501;28502;28503;28504;28505;28506;28507 28504 8 IVQAEGEAEAAK Unmodified 1214.6143 0.61428128 1179 O35129;F6QPR1 Phb2 Prohibitin-2 yes no 0 0 0 0 4.33 0.471 2 1 50.832 50.832 2;3 9.494E-13 16650 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.56 86.11 0 175.57 126.48 183.27 82.973 59.696 0 167 130 176 83 56 0 3 2 3 1 2 23274 10541 1179 10144 24651;24652;24653 28508;28509;28510 28508 3 IVQLLAGVADQTK Unmodified 1354.782 0.78201531 2396 Q8BH59;V9GXX9 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 0 11.2 1.17 2 1 1 1 85.312 85.312 2;3 5.0591E-21 23869 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 158.34 117.26 125.23 19 28.859 63.86 18.867 79.412 120 19 28 60 19 75 3 1 1 2 1 3 113840 10542 2396 10145 24654;24655;24656;24657;24658 28511;28512;28513;28514;28515;28516 28515 6 IVQNAVIQTIGFFGSNLPDYQR Unmodified 2479.286 0.28595827 276 A0A1D5RLL3;Q8BG67 Efr3a Protein EFR3 homolog A yes no 0 0 0 0 12 0 2 100.15 100.15 3;4 7.5306E-07 28484 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.744 49.547 0 0 0 6 0 6 0 0 0 6 0 6 0 0 0 1 0 1 1892.5 10543 276 10146 24659;24660 28517;28518 28517 2 IVQSVIQTAVDQFAR Unmodified 1673.9101 0.91006937 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 11.7 0.471 1 2 96.878 96.878 2;3 0.00045379 27759 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.682 48.71 35.346 26.513 5.41 0 9.0934 9.3345 33 28 5 0 9 9 1 2 1 0 1 1 8194.7 10544 3322 10147 24661;24662;24663 28519;28520;28521 28521 3 IVQVALNGLENILR Unmodified 1550.9144 0.91442646 2098;1189 Q60960;G3UXF0;Q4FJZ2;O35345 Kpna1;Kpna6 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha;Importin subunit alpha-7 no no 0 0 0 0 11.5 0.5 1 1 102.69 102.69 2;3 0.0088554 28883 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.305 23.101 9.6335 4.6704 0 0 3 0 9 5 0 0 3 0 1 1 0 0 1 0 1174.2 10545 2098;1189 10148 24664;24665 28522;28523 28523 2 IVQVTAADAFLDLIR Unmodified 1643.9247 0.9246568 1643 P56564 Slc1a3 Excitatory amino acid transporter 1 yes yes 0 0 0 0 10.3 1.89 2 2 1 1 1 2 97.819 97.819 2;3 8.1686E-17 32025 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.39 100.96 140.21 61.675 52.665 117.94 110.83 182.9 131 62 51 112 111 174 6 3 3 5 4 6 223190 10546 1643 10149 24666;24667;24668;24669;24670;24671;24672;24673;24674 28524;28525;28526;28527;28528;28529;28530;28531;28532;28533;28534 28529 11 IVQVVTAEAVAVLK Unmodified 1438.8759 0.87591569 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;F7ALC8;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 9.22 3.26 1 1 2 2 1 1 1 96.308 96.308 2;3 2.5006E-16 31552 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.1 82.901 39.359 256.76 248.76 188.2 374.26 192.28 37 248 242 177 371 187 1 10 7 6 11 8 61781 10547 1424 10150 24675;24676;24677;24678;24679;24680;24681;24682;24683 28535;28536;28537;28538;28539;28540;28541;28542;28543;28544;28545;28546;28547;28548;28549;28550;28551 28542 17 IVQVVTAEAVAVLKGEQEK Unmodified 2010.1361 0.13610614 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;F7ALC8;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 9 0 1 94.665 94.665 4 1.5253E-07 33831 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.325 85.83 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 2987 10548 1424 10151 24684 28552 28552 1 IVSAQSLAEDDVE Unmodified 1374.6515 0.65145464 280 A0A1D5RLZ6;Q9DCC8 Tomm20 Mitochondrial import receptor subunit TOM20 homolog yes no 0 0 0 0 3.5 0.5 1 1 69.252 69.252 2 2.5102E-13 25012 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.35 110.04 39.701 0 0 48.767 0 0 37 0 0 47 0 0 1 0 0 2 0 0 27777 10549 280 10152 24685;24686 28553;28554 28554 2 IVSLFAEHNDLQYAAPGGLIGVGTK Unmodified 2569.354 0.35403784 3359 Q9Z0N1;Q9Z0N2 Eif2s3x;Eif2s3y Eukaryotic translation initiation factor 2 subunit 3, X-linked;Eukaryotic translation initiation factor 2 subunit 3, Y-linked yes no 0 0 0 0 9 0 1 84.373 84.373 4 4.1444E-23 29298 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.5 83.628 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 3308.5 10550 3359 10153 24687 28555 28555 1 IVSNASCTTNCLAPLAK Unmodified 1818.8968 0.89680384 1395 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;V9GXA7 Gapdh;Gm15294 Glyceraldehyde-3-phosphate dehydrogenase yes no 0 0 0 0 8.8 3.09 1 1 1 3 2 1 1 64.199 64.199 2;3;4 3.0371E-19 20321 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.235 75.569 1367.8 592.04 1463.4 1191.3 1315.6 1068.8 1285 609 1425 1182 1320 1036 9 8 9 9 6 7 801660 10551 1395 10154 24688;24689;24690;24691;24692;24693;24694;24695;24696;24697 28556;28557;28558;28559;28560;28561;28562;28563;28564;28565;28566;28567;28568;28569 28564 14 IVSNASCTTNCLAPLAK Deamidation (N) 1819.8808 0.88081943 1395 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;V9GXA7 Gapdh;Gm15294 Glyceraldehyde-3-phosphate dehydrogenase yes no 0 1 0 0 8.71 2.37 1 5 3 2 3 67.448 67.448 2;3;4 1.0016E-12 21246 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.25 97.222 706.07 664.14 756.76 613.88 653.94 994.04 663 671 746 607 667 950 10 11 9 9 8 13 200760 10552 1395 10154 24698;24699;24700;24701;24702;24703;24704;24705;24706;24707;24708;24709;24710;24711 28570;28571;28572;28573;28574;28575;28576;28577;28578;28579;28580;28581;28582;28583;28584;28585 28576 465;466 16 IVSNASCTTNCLSPLAK Unmodified 1834.8917 0.89171846 3448 S4R1W1 Gm3839 Glyceraldehyde-3-phosphate dehydrogenase yes yes 0 0 0 0 8 0.816 1 1 1 63.899 63.899 3;4 6.7771E-06 19798 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.355 71.516 54.078 136.32 155.93 96.963 64.942 49.036 51 134 153 93 65 46 1 3 2 2 1 1 12073 10553 3448 10155 24712;24713;24714 28586;28587;28588;28589 28589 4 IVSNVPQLEFLNLSSNPLSLSVLER Unmodified 2767.512 0.51199504 2506 Q8C5W3 Tbcel Tubulin-specific chaperone cofactor E-like protein yes yes 0 0 0 0 9 0 1 102.32 102.32 3 0.0056704 36299 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 31.37 14.432 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10554 2506 10156 24715 28590 28590 1 IVSQLLTLMDGLK Unmodified 1429.8214 0.82143728 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 8.67 5.44 1 1 1 108.1 108.1 3 3.4573E-05 34779 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.942 69.135 12.778 26.615 20.942 36.494 29.288 31.98 12 26 20 34 28 30 1 2 2 2 2 2 9071.3 10555 1875 10157 24716;24717;24718 28591;28592;28593;28594 28591 4 IVSSASTDLQDYTYYFVPAPWLSVK Unmodified 2849.4164 0.41636332 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 10.7 1.58 2 2 1 2 103.05 103.05 3;4;5 3.7725E-21 33209 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.239 74.224 77.838 54.919 60.211 39.807 31.605 79.048 73 56 59 40 33 75 3 3 2 2 2 4 27242 10556 1400 10158 24719;24720;24721;24722;24723;24724;24725 28595;28596;28597;28598;28599;28600;28601;28602 28598 8 IVSSNDVGHDEYSTQSLVK Unmodified 2076.9964 0.99637777 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6 0.707 1 2 1 56.828 56.828 3;4 2.6781E-36 19261 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 150.7 115.75 267.89 210.96 236.55 339.94 182.27 97.602 251 215 246 324 186 93 4 5 6 6 3 3 30092 10557 2148 10159 24726;24727;24728;24729 28603;28604;28605;28606;28607;28608;28609 28603 7 IVSSSQDGK Unmodified 919.46108 0.4610751 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 8.67 3.09 1 1 1 40.873 40.873 2;3 0.00039822 10992 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.67 49.275 39.098 65.761 45.629 0 84.521 66.878 37 65 46 0 83 65 1 1 1 0 1 1 3695.7 10558 1752 10160 24730;24731;24732 28610;28611;28612 28610 3 IVSWSQAGVEPSVMGVGPIPAIK Unmodified 2321.2453 0.24533901 2518 Q8CAY6;G3XA25;Q80X81 Acat2;Acat3 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 0 10 0.816 1 1 1 88.936 88.936 3;4 5.2395E-15 31388 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.303 63.424 48.346 8.2041 0 0 0 56 47 9 0 0 0 56 2 1 0 0 0 1 8939.6 10559 2518 10161 24733;24734;24735 28613;28614;28615 28613 3 IVTCGADR Unmodified 890.428 0.42800083 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 6.5 0.5 1 1 36.653 36.653 2 0.011497 8294 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.195 49.079 63.979 47.679 143 94.537 157.42 71.494 60 46 139 97 157 69 1 1 2 2 2 1 40130 10560 3303 10162 24736;24737 28616;28617 28617 2 IVTITGPTDAIFK Unmodified 1374.7759 0.7758673 1647 P57722;E9Q7D8 Pcbp3 Poly(rC)-binding protein 3 yes no 0 0 0 0 10 0 1 79.112 79.112 2 3.9156E-08 24618 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.568 55.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10561 1647 10163 24738 28618 28618 1 IVTSASTDLQDYTYYFVPAPWLSVK Unmodified 2863.432 0.43201339 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 11 1.41 1 3 1 1 2 103.42 103.42 3;4;5 6.9933E-23 33296 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.836 68.396 56.523 36.15 53.513 95.775 70.996 77.59 53 36 52 92 72 74 4 3 3 7 5 5 36626 10562 1401 10164 24739;24740;24741;24742;24743;24744;24745;24746 28619;28620;28621;28622;28623;28624;28625;28626;28627;28628;28629;28630;28631 28621 13 IVTSEEVIIR Unmodified 1157.6656 0.66558856 1841 P97300;H3BIX4;Z4YLB7;A0A0A0MQN8 Nptn Neuroplastin yes no 0 0 0 0 8 3.56 1 1 1 60.716 60.716 2 3.7972E-09 21239 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 156.62 98.012 447.57 469.34 351.74 631.44 546.91 317.1 421 475 373 604 561 306 4 5 4 5 6 4 105140 10563 1841 10165 24747;24748;24749 28632;28633;28634;28635;28636;28637 28637 6 IVTTHIR Unmodified 838.50249 0.5024864 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 10 1.63 1 2 1 1 1 35.951 35.951 2;3 0.0010566 6376 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.12 62.984 522.15 473.35 479.71 460.95 584.44 576.02 491 479 485 456 592 556 5 5 5 5 4 5 351940 10564 118;1534 10166 24750;24751;24752;24753;24754;24755 28638;28639;28640;28641;28642;28643 28641 6 IVVAMAK Unmodified 730.44113 0.4411317 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 11 0 1 58.602 58.602 2 0.02025 15001 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.84 53.371 173.83 0 0 0 204.85 157.25 162 0 0 0 201 153 1 0 0 0 1 1 55160 10565 2401 10167 24756 28644 28644 1 IVVLLQR Unmodified 839.55927 0.559273 1067 G3UXZ5;P97371;G3UXY0;G3X9K9;G3UWN9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 6.5 5.5 1 1 65.874 65.874 2 0.027272 16220 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.785 30.447 247.5 43.605 203.82 166.22 268.22 221.54 232 46 196 167 271 215 2 1 1 1 2 2 46683 10566 1067 10168 24757;24758 28645;28646 28646 2 IVVPPLPGK Unmodified 918.59024 0.59023878 1259 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493 Snx12 Sorting nexin-12 yes no 0 0 0 0 10.5 0.5 1 1 69.431 69.431 2;3 0.00093606 19688 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.36 92.977 245.83 70.713 281.31 71.575 0 256.91 231 74 268 74 0 241 2 1 2 1 0 2 68621 10567 1259 10169 24759;24760 28647;28648 28648 2 IVVQGEPGDEFFIILEGTAAVLQR Unmodified 2600.385 0.38500361 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 0 10 3 1 1 112.21 112.21 3 8.4329E-17 37765 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.957 91.649 0 11.704 0 4.372 5.23 0 0 11 0 4 5 0 0 2 0 1 1 0 1556.2 10568 3119 10170 24761;24762 28649;28650 28649 2 IVVVTAGVR Unmodified 912.57565 0.57565135 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 55.181 55.181 2 3.7599E-08 13475 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 164.53 110.77 2401 1834.5 1559.1 1744.9 3175 2667 2252 1879 1559 1713 3190 2580 8 9 7 8 8 9 711410 10569 1389 10171 24763;24764;24765;24766;24767;24768 28651;28652;28653;28654;28655;28656;28657;28658;28659;28660;28661 28655 11 IVYGHLDDPANQEIER Unmodified 1867.9064 0.90644055 2843 Q99KI0;A0A2R8VJW0 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 6.17 3.13 2 2 1 1 54.528 54.528 3;4 2.7552E-17 18142 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.9 112.21 354.5 351.3 479.74 288.76 370.02 502.19 333 343 464 279 371 481 5 5 6 5 4 6 305500 10570 2843 10172 24769;24770;24771;24772;24773;24774 28662;28663;28664;28665;28666;28667;28668;28669 28669 8 IVYVNEK Unmodified 863.47527 0.4752686 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 8 0.816 1 1 1 53.196 53.196 2 0.0076302 16068 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.57 69.585 274.83 305.38 418.1 300.51 422.21 431.41 259 311 417 305 431 416 2 3 3 3 3 3 32072 10571 1868 10173 24775;24776;24777 28670;28671;28672 28670 3 IWAHEALR Unmodified 994.53485 0.53484916 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 46.563 46.563 3 0.0099143 11486 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.419 38.787 20.244 28.427 0 50.278 0 0 19 28 0 46 0 0 1 1 0 1 0 0 8898 10572 3204 10174 24778 28673 28673 1 IWCFGPDGTGPNILTDITK Deamidation (N) 2105.0139 0.01394209 1652 P58252 Eef2 Elongation factor 2 yes yes 0 1 0 0 8 0 1 93.817 93.817 3 1.4201E-06 34033 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.184 45.748 14.871 13.662 13.852 9.0114 0 0 14 14 14 9 0 0 1 1 1 1 0 0 1625.7 10573 1652 10175 24779 28674 28674 633 1 IWCTEPSPGIVAFPR Unmodified 1728.8658 0.86576171 1384 P15209;A0A286YDA0;A0A286YCV8;A0A286YDA3 Ntrk2 BDNF/NT-3 growth factors receptor yes no 0 0 0 0 8.5 0.5 1 1 78.581 78.581 3 0.00055327 26645 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.035 44.816 59.794 78.026 91.947 58.676 47.137 77.539 56 74 92 56 46 74 1 1 2 1 1 2 9093.5 10574 1384 10176 24780;24781 28675;28676 28676 2 IWDPIHR Unmodified 935.49774 0.49773538 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 54.115 54.115 3 0.022553 15796 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.714 38.742 39.275 16.605 57.567 16.8 28.516 0 37 19 55 19 28 0 1 1 1 1 1 0 3854.6 10575 2178 10177 24782 28677 28677 1 IWDTTQK Unmodified 890.44978 0.44978213 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8 0.816 1 1 1 56.014 56.014 2 0.016214 15922 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.17 48.692 365.35 69.225 392.92 323.45 386.22 230.24 343 74 382 324 391 222 3 1 3 3 3 2 60712 10576 1263 10178 24783;24784;24785 28678;28679;28680 28680 3 IWDVNVNSVVSTFPMGSNVLDQQLGCLWQK Unmodified 3433.6799 0.67988178 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 11.3 1.25 1 1 1 107.35 107.35 4 1.2334E-12 33852 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.323 47.182 5 24.287 11.076 15.735 0 9.594 5 23 11 15 0 9 1 2 1 2 0 1 5287.3 10577 1263 10179 24786;24787;24788 28681;28682;28683 28681 3 IWEIPDGGLK Unmodified 1126.6023 0.60226003 2393 Q8BH44;G3UW48 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 8 0 1 76.57 76.57 2 0.026975 26357 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.859 28.049 29.572 26.852 56.566 26.566 35.466 58.684 28 28 55 28 37 56 1 1 1 1 1 1 3478.9 10578 2393 10180 24789 28684 28684 1 IWELELINVLK Unmodified 1368.8017 0.80168812 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R235;K4DI73 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 10.7 1.7 1 1 1 100.51 100.51 2;3 0.00045694 40537 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.763 50.325 0 0 30.296 9 85.83 28.772 0 0 28 9 83 28 0 0 2 1 2 1 4638.5 10579 3447 10181 24790;24791;24792 28685;28686;28687 28687 3 IWHHTFYNELR Deamidation (N) 1515.7259 0.72589741 1673;1781;1791 P60710;E9Q5F4;G3UZ07;E9Q606;P63260;G3UYG0;P68033;P68134;A0A1D5RM20 Actb;Actg1;Actc1;Acta1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle no no 0 1 0 0 8 0 1 54.849 54.849 4 0.0011831 16169 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.533 59.868 39.034 104.95 56.46 0 48.116 49.036 37 102 56 0 46 46 1 2 1 0 1 1 7063.6 10580 1673;1781;1791 10182 24793 28688;28689 28688 643 2 IWHHTFYNELR Unmodified 1514.7419 0.74188183 1673;1781;1791 P60710;E9Q5F4;G3UZ07;E9Q606;P63260;G3UYG0;P68033;P68134;A0A1D5RM20 Actb;Actg1;Actc1;Acta1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle no no 0 0 0 0 11.1 1.25 1 1 2 2 1 51.752 51.752 3;4 5.78E-10 12763 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.81 106.66 1608.7 1321.9 956.39 1169 802.51 1313.3 1509 1336 946 1102 797 1243 12 11 10 7 8 9 250560 10581 1673;1781;1791 10182 24794;24795;24796;24797;24798;24799;24800 28690;28691;28692;28693;28694;28695;28696;28697;28698;28699;28700;28701;28702;28703;28704;28705;28706 28694 17 IWILTGDKQETAINIGHSCR Unmodified 2311.1743 0.17429933 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 1 11 0 1 67.383 67.383 4 0.0047798 18870 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.521 31.019 59.76 65.13 0 0 0 0 56 65 0 0 0 0 1 1 0 0 0 0 15385 10582 121 10183 24801 28707 28707 1 IWISNGGLADIFTVFAK Deamidation (N) 1851.9771 0.9770863 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 1 0 0 12 0 1 113.64 113.64 3 1.1325E-05 30613 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.418 9.9533 11.771 0 5.3507 0 4.9786 7.3199 11 0 5 0 5 7 1 0 1 0 1 1 2196.1 10583 577 10184 24802 28708 28708 169 1 IWLVDSK Unmodified 859.48035 0.48035398 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10 1 1 1 70.346 70.346 2 0.012754 20206 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.17 35.788 149.15 0 0 219.71 173.3 340.44 139 0 0 204 176 324 1 0 0 2 1 2 20991 10584 1317 10185 24803;24804 28709;28710 28710 2 IWQYVYSK Unmodified 1085.5546 0.55458155 2672;1691 P61164;Q8R5C5;E0CZD4;E0CYB4 Actr1a;Actr1b Alpha-centractin;Beta-centractin no no 0 0 0 0 10 4.56 1 1 1 2 74.042 74.042 2;3 0.0027938 19484 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.41 80.254 414.22 374.09 542.43 701.29 162.72 522.71 389 362 537 668 167 494 4 4 6 7 3 6 193720 10585 1691;2672 10186 24805;24806;24807;24808;24809 28711;28712;28713;28714;28715;28716;28717;28718 28716 8 IWSSEHVFGHPWDTVIK Unmodified 2037.0108 0.010846043 2705 Q8VE85 Slmo1 Protein slowmo homolog 1 yes yes 0 0 0 0 9 0 1 98.417 98.417 3 0.0035808 35211 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.807 3.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10586 2705 10187 24810 28719 28719 1 IWSVPNTSCVQVVR Unmodified 1643.8454 0.84536062 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 0 0 0 10.5 0.5 1 1 68.476 68.476 3 2.2796E-05 19734 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.639 47.033 0 0 68.781 34.769 83.619 46.65 0 0 65 37 83 46 0 0 1 1 1 1 11557 10587 2847 10188 24811;24812 28720;28721 28720 2 IWYHTFYNELR Unmodified 1540.7463 0.7462985 2366 Q8BFZ3 Actbl2 Beta-actin-like protein 2 yes yes 0 0 0 0 10 0 1 57.051 57.051 4 0.00046342 15043 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.342 52.868 59.266 63.758 84.104 35.428 0 0 56 65 83 37 0 0 1 1 1 1 0 0 13190 10588 2366 10189 24813 28722 28722 1 IYAGTGALEGK Unmodified 1078.5659 0.56587452 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10.2 2.77 1 1 2 57.003 57.003 2;3 1.3367E-07 19509 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.06 70.028 266.36 159.94 252.08 284.71 218.88 348.73 250 162 250 278 226 333 3 3 3 4 3 4 31395 10589 927 10190 24814;24815;24816;24817 28723;28724;28725;28726;28727 28725 5 IYAMHWGTDSR Unmodified 1335.603 0.60300508 1751;1750 P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7 Gnb2;Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 0 9 0.816 1 1 1 55.011 55.011 2;3 3.663E-08 16242 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.03 76.154 307.75 150.96 87.013 194.48 222.65 322.81 288 157 83 186 232 308 3 2 1 2 3 2 51372 10590 1751;1750 10191 24818;24819;24820 28728;28729;28730 28728 3 IYANFFPYGDASK Unmodified 1491.7034 0.70343063 1832;1734 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5 Hpcal1;Hpca Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 0 10.7 1.25 1 2 2 1 77.833 77.833 2;3;4 7.509E-05 26437 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.633 58.793 607.27 598.32 1027.2 799.66 806.77 850.48 573 601 1016 799 831 814 6 4 7 7 6 6 407450 10591 1734;1832 10192 24821;24822;24823;24824;24825;24826 28731;28732;28733;28734;28735;28736;28737;28738 28732 8 IYDDDFFQNLDGVANALDNIDAR Unmodified 2613.1983 0.19832505 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7 3.16 1 1 1 1 1 99.9 99.9 3 1.0334E-27 37377 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 127.05 112.36 18.207 9.36 44.337 38.418 14.963 48.788 17 9 43 37 15 46 3 2 4 3 3 4 36262 10592 1876 10193 24827;24828;24829;24830;24831 28739;28740;28741;28742;28743;28744;28745 28742 7 IYDLNIPAFVK Unmodified 1291.7176 0.71762413 1231 O55033;A0A0J9YUK4 Nck2 Cytoplasmic protein NCK2 yes no 0 0 0 0 10.7 1.7 1 1 1 84.926 84.926 3 0.0012863 27089 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.408 36.079 39.701 0 58.253 17.536 75.339 67.14 37 0 56 19 75 65 1 0 2 1 2 2 8376.8 10593 1231 10194 24832;24833;24834 28746;28747;28748 28747 3 IYDLNKPEAEPK Unmodified 1415.7296 0.72964538 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 1 7 0 1 55.312 55.312 3 0.00061449 16996 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.255 56.246 78.767 62.955 53.455 66.51 71.71 76.838 74 65 56 65 74 74 1 1 1 1 1 1 5876.4 10594 3388 10195 24835 28749 28749 1 IYDMDKDGYISNGELFQVLK Deamidation (N) 2348.1246 0.12461475 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 1 0 1 8.17 2.27 1 2 2 1 85.844 85.844 3;4 6.3109E-22 33473 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.26 98.109 207.48 156.89 174.72 227.23 181.48 225.4 194 159 167 213 186 214 3 4 4 4 5 4 46976 10595 2164 10196 24836;24837;24838;24839;24840;24841 28750;28751;28752;28753;28754;28755;28756 28756 848 7 IYDMDKDGYISNGELFQVLK Unmodified 2347.1406 0.14059917 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 1 7.5 0.5 1 1 84.564 84.564 3 3.035E-08 30805 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.713 61.398 29.751 0 49.315 6.8979 0 29.848 28 0 46 9 0 28 1 0 1 1 0 1 2518.9 10596 2164 10196 24842;24843 28757;28758 28757 2 IYEEEVR Unmodified 936.45526 0.45526144 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 6.67 4.5 1 1 1 44.272 44.272 2 0.0072946 14102 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.4 38.356 118.07 447.9 226.65 422.7 110.92 664.15 111 432 232 401 120 626 1 3 2 3 1 3 65852 10597 1304 10197 24844;24845;24846 28759;28760;28761 28759 3 IYEFPETDDEEENK Unmodified 1756.7316 0.73155546 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 3.5 0.5 1 1 64.579 64.579 3 4.0925E-29 22863 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.99 109.54 109.86 36.703 79.713 29.565 137.74 152.77 103 37 74 28 138 147 3 1 2 1 3 3 47863 10598 879 10198 24847;24848 28762;28763;28764 28764 3 IYEFPETDDEEENKLVK Unmodified 2096.979 0.97899637 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 7 3.16 1 1 1 1 1 67.959 67.959 3;4 3.5602E-08 24717 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.64 94.764 303.77 454.84 462.51 483.5 535.91 408.98 287 454 474 476 547 398 3 4 4 4 5 5 73385 10599 879 10199 24849;24850;24851;24852;24853 28765;28766;28767;28768;28769 28769 5 IYELAAGGTAVGTGLNTR Unmodified 1762.9214 0.92136233 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 7.67 0.745 3 2 1 68.386 68.386 2;3 6.7137E-14 21834 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.94 86.371 129.24 64.155 88.819 9.4841 84.436 107.39 121 65 84 9 84 103 2 2 2 1 2 3 56035 10600 1857 10200 24854;24855;24856;24857;24858;24859 28770;28771;28772;28773;28774;28775 28775 6 IYELAGK Unmodified 792.43815 0.43815481 2986 Q9CXF7 Chd1l Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 0 7 0 1 54.183 54.183 2 0.030245 16494 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.086 10.776 88.48 0 97.336 63.843 74.471 0 83 0 93 65 74 0 1 0 1 1 1 0 5261 10601 2986 10201 24860 28776 28776 1 IYEQDEEK Unmodified 1052.4662 0.46622005 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 3.5 0.5 1 1 45.311 45.311 2 0.01178 14518 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.051 24.059 48.965 84.409 35.992 37.423 94.513 0 46 83 37 37 92 0 1 2 1 1 2 0 9207.6 10602 2899 10202 24861;24862 28777;28778 28777 2 IYESIEEAK Unmodified 1080.5339 0.53390569 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 9 4 1 1 61.44 61.44 2;3 0.021075 21433 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.184 23.311 9.5583 19.571 0 49.966 16.57 29.375 9 19 0 46 19 28 1 1 0 1 1 1 3054.8 10603 347 10203 24863;24864 28779;28780 28780 2 IYFLSTEDLPR Unmodified 1352.6976 0.69761697 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 9.25 2.28 1 1 1 1 77.37 77.37 2;3 2.959E-16 26049 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 166.66 96.845 137.25 185.95 125.64 204.02 153.85 144.85 129 185 130 194 157 139 2 3 3 3 3 2 43313 10604 2322 10204 24865;24866;24867;24868 28781;28782;28783;28784;28785 28784 5 IYFMAGSSR Unmodified 1030.4906 0.49060109 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 11.5 0.5 1 1 60.028 60.028 2 3.3775E-05 14235 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 137.88 99.723 78.862 88.312 90.838 139.63 75.382 91.657 74 83 88 134 79 88 1 1 1 2 1 1 31225 10605 1324 10205 24869;24870 28786;28787 28787 2 IYGDIIYTSAK Unmodified 1242.6496 0.64960415 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 68.294 68.294 2;3 5.4243E-14 22519 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.95 79.011 157.81 185.21 122.76 126.2 175.33 174.92 148 186 120 121 176 166 2 4 2 3 3 2 30085 10606 2469 10206 24871;24872;24873;24874 28788;28789;28790;28791 28789 4 IYGEVVFK Unmodified 953.52222 0.52221879 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 0 0 0 8 0 1 68.205 68.205 3 0.021066 22460 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.17 28.247 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 1554.5 10607 889 10207 24875 28792 28792 1 IYGFYDECK Unmodified 1193.5063 0.50631073 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 7.5 0.5 1 1 65.033 65.033 2 0.00088433 20907 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.41 79.57 157.04 202.62 166.75 64.05 113.16 29.848 148 203 166 65 111 28 2 3 2 1 1 1 19440 10608 1710;1711;1770 10208 24876;24877 28793;28794;28795 28795 3 IYGGLTSK Unmodified 837.45962 0.45961853 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 10 0 1 54.605 54.605 2 0.011453 13510 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.374 37.363 108.64 0 136.06 90.958 137.29 114.41 102 0 130 93 139 111 1 0 1 1 1 1 8490.8 10609 3327 10209 24878 28796 28796 1 IYGISFPDPK Unmodified 1135.5914 0.59136099 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10 0 1 74.074 74.074 2 0.0092961 22398 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.563 18.195 24.401 22.362 27.811 22.903 30.766 48.158 23 23 28 23 32 46 1 1 1 1 1 1 3202 10610 3032 10210 24879 28797 28797 1 IYGNFFPYGDASK Unmodified 1477.6878 0.68778057 2763 Q91X97;D3YVA2;D3Z2Z8;D3Z1M0 Ncald Neurocalcin-delta yes no 0 0 0 0 10.3 1.6 1 1 1 2 1 75.363 75.363 2;3 5.3042E-11 28531 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.55 84.851 254.06 170.48 111.36 155.9 246.65 166.54 241 167 112 148 241 158 5 3 2 2 4 2 70922 10611 2763 10211 24880;24881;24882;24883;24884;24885 28798;28799;28800;28801;28802;28803;28804 28804 7 IYHLQSK Unmodified 887.4865 0.48650199 1148 J3QQ30;J3QPW1;P53810;F8WGG5 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 10 0.816 1 1 1 42.803 42.803 3 0.0035224 9945 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.86 28.315 506.75 400.04 694.42 501.84 115.75 575.53 478 419 687 499 120 543 2 2 2 2 1 2 88361 10612 1148 10212 24886;24887;24888 28805;28806;28807 28805 3 IYHPNIDEK Unmodified 1127.5611 0.56112349 412 A0A338P786;P68037;A0A338P7E5;A0A338P702 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 0 13 0 1 45.435 45.435 3 0.0023907 14165 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.643 44.63 147.74 105.68 147.11 133.32 0 178.02 139 111 148 130 0 167 1 1 1 1 0 1 23623 10613 412 10213 24889 28808 28808 1 IYHPNINSNGSICLDILR Deamidation (N) 2099.047 0.046973553 1746;88 P62838;P61080;A0A0G2JE32;A0A0G2JGL0;P61079 Ube2d2;Ube2d1;Ube2d3 Ubiquitin-conjugating enzyme E2 D2;Ubiquitin-conjugating enzyme E2 D1;Ubiquitin-conjugating enzyme E2 D3 no no 0 1 0 0 7.5 0.5 1 1 72.51 72.51 3 3.0302E-05 25152 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.289 53.346 69.009 93.556 44.412 27.297 35.103 68.288 65 93 46 28 37 65 2 2 1 1 1 1 14335 10614 1746;88 10214 24890;24891 28809;28810 28809 30 2 IYHPNVDK Unmodified 984.50288 0.50288033 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 0 8.67 3.09 1 1 1 42.098 42.098 3 0.0083688 12239 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.621 47.306 580.23 145.11 642.46 546.05 661.14 424.93 545 148 627 546 670 411 2 1 2 2 2 1 42377 10615 1688 10215 24892;24893;24894 28811;28812;28813 28813 3 IYHQNQR Unmodified 957.47806 0.47806257 3365 Q9Z0V2;Q9Z0V1;Q03719 Kcnd2;Kcnd3;Kcnd1 Potassium voltage-gated channel subfamily D member 2;Potassium voltage-gated channel subfamily D member 3;Potassium voltage-gated channel subfamily D member 1 yes no 0 0 0 0 7.5 0.5 1 1 23.34 23.34 3 0.0045541 3381 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.29 60.04 26.735 29.082 57.549 50.413 42.929 53.141 25 28 57 50 45 51 1 1 2 2 2 2 3858.6 10616 3365 10216 24895;24896 28814;28815 28815 2 IYIDSNNNPER Unmodified 1333.6262 0.62624295 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.75 3.11 1 1 1 1 47.94 47.94 2 3.063E-20 15034 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 175.65 169.68 473.08 348.65 444.71 365.77 227.16 500.66 445 362 444 362 232 475 6 4 4 5 4 5 145540 10617 2185 10217 24897;24898;24899;24900 28816;28817;28818;28819;28820;28821 28816 6 IYIDSNNNPER Deamidation (N) 1334.6103 0.61025853 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 7.25 3.34 2 1 1 50.819 50.819 2;3 8.4564E-13 16690 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.75 125.14 78.681 208.88 171.96 119.41 188.38 96.24 74 204 167 111 185 93 2 4 2 2 2 2 20459 10618 2185 10217 24901;24902;24903;24904 28822;28823;28824;28825 28825 860 4 IYIPLPTAK Unmodified 1014.6114 0.61136815 2584 Q8K0T4 Katnal1 Katanin p60 ATPase-containing subunit A-like 1 yes yes 0 0 0 0 12 0 1 74.598 74.598 3 0.0046627 19583 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.679 35.574 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 3315.1 10619 2584 10218 24905 28826 28826 1 IYKVPSTEAEALASSLMGLFEK Unmodified 2383.2345 0.23449955 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 11 0 1 104.31 104.31 4 0.030457 34526 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.391 10.792 20.387 0 0 0 18.867 29.31 19 0 0 0 19 28 1 0 0 0 1 1 1663.7 10620 2132 10219 24906 28827 28827 1 IYKVPSTETEALASNLMGMFEK Unmodified 2458.2124 0.2123839 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 1 10.5 1.5 1 2 1 93.957 93.957 4;5 1.1055E-15 33838 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.22 76.325 69.479 95.801 42.678 109.5 86.197 116.93 65 93 42 102 88 112 3 4 2 4 3 5 12087 10621 1595 10220 24907;24908;24909;24910 28828;28829;28830;28831;28832;28833 28829 6 IYLDMLNVYK Unmodified 1270.6631 0.66314572 2222 Q6P5F9;F6YA11 Xpo1 Exportin-1 yes no 0 0 0 0 10.5 0.5 1 1 85.606 85.606 3 0.002459 26950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.823 38.031 20.387 0 0 20.767 9 0 19 0 0 19 9 0 1 0 0 1 1 0 5864.7 10622 2222 10221 24911;24912 28834;28835 28835 2 IYLLPDRK Unmodified 1016.6019 0.6018661 1090 G3X9Y1;O35681;Q3UY13;Q8C8S6;Q9R0N9;Q9R0N8;Q9R0N4 Syt3;Syt6;Syt9;Syt10 Synaptotagmin-3;Synaptotagmin-9;Synaptotagmin-6;Synaptotagmin-10 yes no 0 0 0 1 11 0 1 56.918 56.918 3 0.016101 14409 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.379 28.465 88.027 80.62 105.08 0 0 0 83 83 102 0 0 0 1 1 1 0 0 0 7265.8 10623 1090 10222 24913 28836 28836 1 IYLPHSLPQQ Unmodified 1194.6397 0.63970816 1303 P03930 Mtatp8 ATP synthase protein 8 yes yes 0 0 0 0 8.5 0.5 1 1 62.169 62.169 2 0.010124 18964 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.351 39.837 0 47.365 94.432 134.92 82.108 126.64 0 46 93 130 83 121 0 1 1 2 1 2 48197 10624 1303 10223 24914;24915 28837;28838 28838 2 IYLTADNLVLNLQDESFTR Unmodified 2224.1376 0.1375627 1179 O35129;F6QPR1 Phb2 Prohibitin-2 yes no 0 0 0 0 7.5 0.5 1 1 91.77 91.77 3 1.0864E-07 33305 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.969 66.854 9.612 8.9279 9 0 5.23 0 9 9 9 0 5 0 1 1 1 0 1 0 6540 10625 1179 10224 24916;24917 28839;28840 28840 2 IYLYLTK Unmodified 912.53206 0.5320552 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 1 0 1 74.74 74.74 2 0.019297 25602 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.09 11.122 69.286 56.926 28.859 79.162 0 89.544 65 56 28 74 0 84 2 1 1 2 0 2 9358.8 10626 3002 10225 24918 28841;28842 28841 2 IYNLFNGYTSGK Unmodified 1375.6772 0.67721588 2110 Q61137 Astn1 Astrotactin-1 yes yes 0 0 0 0 12 0 1 75.466 75.466 3 0.0085394 19952 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.659 16.597 29.904 27.776 0 39.601 44.657 47.762 28 28 0 37 46 46 1 1 0 1 1 1 1987 10627 2110 10226 24919 28843 28843 1 IYNVIGTLK Unmodified 1019.6015 0.60153174 1194 Q0VDM6;O35409 Folh1 Glutamate carboxypeptidase 2 yes no 0 0 0 0 11.5 0.5 1 1 73.765 73.765 3 0.0049237 21681 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.04 38.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10628 1194 10227 24920;24921 28844;28845 28844 2 IYPEEMIQTGISAIDGMNSIAR Deamidation (N) 2409.1556 0.1555973 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 1 0 0 6 0 1 96.819 96.819 3 0.0021409 36495 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.813 21.612 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 1170.8 10629 1741 10228 24922 28846 28846 677 1 IYPEEMIQTGISAIDGMNSIAR Unmodified 2408.1716 0.17158172 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 98.781 98.781 3 8.4974E-28 36215 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.54 112.48 36.404 49.485 49.995 13.767 33.491 62.195 34 49 49 14 34 59 3 6 5 2 4 5 33636 10630 1741 10228 24923;24924;24925;24926;24927 28847;28848;28849;28850;28851;28852;28853;28854;28855 28849 9 IYPHGLVLLDLQSYDSDVQGK Unmodified 2359.206 0.20597662 1845 P97355;E9PZ58;A2AC81 Sms Spermine synthase yes no 0 0 0 0 8.33 0.943 1 2 80.876 80.876 3;4 3.3183E-20 27719 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.973 83.185 167.92 106.78 0 20.767 77.404 0 157 111 0 19 74 0 2 2 0 1 1 0 4966.3 10631 1845 10229 24928;24929;24930 28856;28857;28858 28858 3 IYPLPHMYVIK Unmodified 1372.7577 0.75771481 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 70.353 70.353 2;3 1.5618E-23 17635 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 147.52 92.537 16.949 0 36.885 20.203 29.309 33.276 16 0 35 21 30 32 1 0 1 1 1 1 6149.8 10632 2918 10230 24931;24932 28859;28860 28860 2 IYPVFGTYWDNCNR Unmodified 1803.8039 0.80388973 1118 Q99JR5;H3BJ97;H3BKM8 Tinagl1 Tubulointerstitial nephritis antigen-like yes no 0 0 0 0 10 0 1 80.001 80.001 3 9.6064E-05 25042 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.963 55.165 30.044 0 0 49.77 27.002 0 28 0 0 46 28 0 1 0 0 1 1 0 4097.5 10633 1118 10231 24933 28861 28861 1 IYPYEMLVVTNK Unmodified 1468.7636 0.76358805 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 10.7 1.7 1 1 1 81.055 81.055 2;3 0.00011255 27872 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.058 60.058 108.66 80.999 62.781 75.977 99.565 105.89 102 84 65 74 102 102 2 2 1 1 2 2 8494.8 10634 3344 10232 24934;24935;24936 28862;28863;28864 28862 3 IYQGTEADSIFSGFLIFPSA Unmodified 2162.0572 0.057187113 1861 P98086 C1qa Complement C1q subcomponent subunit A yes yes 0 0 0 0 10 2.16 1 1 1 115.84 115.84 3 6.8043E-07 44969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.2 54.142 6 0 4.082 0 0 8.132 6 0 4 0 0 8 1 0 2 0 0 2 7291.1 10635 1861 10233 24937;24938;24939 28865;28866;28867;28868 28868 4 IYQNIQDGSLDLNAAESGVQHKPSAPQGGR Unmodified 3149.549 0.54900226 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 0 0 0 1 6 0 1 60.482 60.482 4 1.0762E-05 20341 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.37 30.81 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 5064.3 10636 2729 10234 24940 28869 28869 1 IYSFGLGGR Unmodified 968.50797 0.50796571 2252 Q6PHU5 Sort1 Sortilin yes yes 0 0 0 0 10.5 0.5 1 1 64.563 64.563 2 0.00085181 17977 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.7 65.583 98.908 60.878 96.475 0 0 127.92 93 65 93 0 0 120 1 1 1 0 0 1 8410.9 10637 2252 10235 24941;24942 28870;28871 28870 2 IYSNAGEQSFDK Unmodified 1357.615 0.61500956 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 13 0 1 54.005 54.005 3 0.011398 18257 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.704 30.48 108.54 60.137 101.95 95.573 0 88.478 102 65 102 93 0 83 1 1 1 1 0 1 3821.9 10638 2012 10236 24943 28872 28872 1 IYSTCTDFER Unmodified 1290.5551 0.55505184 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 6 0 1 52.82 52.82 2 0.0029037 16681 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.849 60.614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10639 2306 10237 24944 28873 28873 1 IYSTLAGTR Unmodified 980.5291 0.52909508 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 11.5 1.5 1 1 51.902 51.902 2 0.0055476 12565 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.168 64.392 169.03 98.952 84.211 217.95 0 0 158 93 83 204 0 0 1 1 1 2 0 0 19313 10640 2396 10238 24945;24946 28874;28875 28874 2 IYSYVVSRPQPR Unmodified 1463.7885 0.78849767 684 D3YUP4;D3Z2H4;Q3TDN2 Faf2 FAS-associated factor 2 yes no 0 0 0 1 12 0 1 50.211 50.211 3 0.00041867 10233 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.489 41.206 29.725 0 53.648 31.078 37.274 0 28 0 51 32 37 0 1 0 1 1 1 0 5404.7 10641 684 10239 24947 28876 28876 1 IYTFNQSR Unmodified 1027.5087 0.50869399 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 9.5 0.5 1 1 50.427 50.427 2 0.0038467 13326 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.09 92.838 331.03 317.09 0 312.4 126.79 223.44 310 319 0 288 130 213 3 3 0 3 1 2 32420 10642 2783 10240 24948;24949 28877;28878;28879 28878 3 IYTPMEYK Unmodified 1043.4998 0.49976879 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 61.854 61.854 2 0.010052 18721 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.629 56.737 138.36 86.614 184.08 228.94 145.27 48.041 130 92 185 222 148 46 2 2 3 3 2 1 20594 10643 2734 10241 24950;24951;24952 28880;28881;28882 28882 3 IYTSIGEDYDER Unmodified 1459.6467 0.64670362 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 4.5 1.12 1 1 1 1 58.412 58.412 2;3 7.53E-18 19967 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.3 104.44 59.708 39.064 97.671 55.586 58.576 59.696 56 38 92 55 56 56 2 2 2 2 1 2 21825 10644 1788 10242 24953;24954;24955;24956 28883;28884;28885;28886;28887 28886 5 IYVDDGLISLQVK Unmodified 1461.8079 0.80789571 1609 P52480;A0A1L1SU37;A0A1L1SQV8 Pkm Pyruvate kinase PKM yes no 0 0 0 0 8.29 2.25 2 1 1 2 1 82.385 82.385 2;3 1.9786E-21 29142 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.36 110.25 458.71 290.73 399.54 542.7 597.33 293.44 430 294 399 521 598 281 8 5 6 7 7 6 117940 10645 1609 10243 24957;24958;24959;24960;24961;24962;24963 28888;28889;28890;28891;28892;28893;28894;28895;28896;28897;28898 28892 11 IYVGNLPPDIR Unmodified 1255.6925 0.69247202 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 8 0 1 67.242 67.242 2 0.056045 22110 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.5 16.38 59.471 34.108 74.755 66.59 0 88.478 56 37 74 65 0 83 1 1 1 1 0 1 3814.4 10646 1130 10244 24964 28899 28899 1 IYVMPWIPYR Unmodified 1336.7002 0.70019993 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 1 0 1 86.235 86.235 2 8.5232E-05 30578 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.39 60.752 0 9.576 0 0 8.3971 29.608 0 9 0 0 9 28 0 1 0 0 1 1 1841.1 10647 1127 10245 24965 28900 28900 1 IYWMNSK Unmodified 940.44767 0.44767364 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 12 0 1 64.624 64.624 2 0.026876 15772 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.784 59.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10648 456 10246 24966 28901 28901 1 KAAAELLQSQGSQAGGSQTLK Unmodified 2072.0862 0.08619583 3317 Q9R1T4 Sept6 Septin-6 yes yes 0 0 0 1 9 0 1 55.419 55.419 4 1.1102E-07 15646 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.42 47.022 59.729 0 60.291 0 0 69.29 56 0 56 0 0 65 1 0 1 0 0 1 13122 10649 3317 10247 24967 28902 28902 1 KAADVHEVR Unmodified 1023.5461 0.54614213 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 7.5 3.2 1 2 1 29.361 29.361 3;4 0.0010082 5821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.397 36.199 1104.8 766.53 863.15 897.68 966.79 1172.7 1038 804 873 885 998 1126 4 4 2 3 3 4 87389 10650 1609 10248 24968;24969;24970;24971 28903;28904;28905;28906 28905 4 KAAIISAEGDSK Unmodified 1188.635 0.63501672 1788 P67778 Phb Prohibitin yes yes 0 0 0 1 8 0 1 48.219 48.219 3 0.0009634 12956 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.168 43.313 39.58 23.931 0 26.645 36.159 38.41 37 25 0 25 37 37 1 1 0 1 1 1 12803 10651 1788 10249 24972 28907 28907 1 KAALAALTK Unmodified 885.56475 0.56475231 1078 G3X928;Q6NZC7 Sec23ip SEC23-interacting protein yes no 0 0 0 1 1 0 1 56.191 56.191 3 0.0027178 17686 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.869 44.159 48.74 55.344 57.026 0 36.028 77.856 46 56 56 0 37 74 1 1 1 0 1 1 2181.8 10652 1078 10250 24973 28908 28908 1 KAALEYLEDIDLK Unmodified 1519.8134 0.81337501 1953 Q3U125;Q9CYH2;D3YYG8;D3Z398;D3Z252;D3Z0A8;D3Z143;D3YWL4 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 1 7 0 1 80.485 80.485 3 0.00024006 28875 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.729 59.898 59.401 73.846 52.89 66.709 62.937 57.9 56 74 56 65 65 56 1 1 1 1 1 1 2697.6 10653 1953 10251 24974 28909 28909 1 KAAVPTPAK Unmodified 881.53345 0.53345218 1333 P09405;A0A087WRM5 Ncl Nucleolin yes no 0 0 0 1 11 0 1 40.771 40.771 3 0.014764 7960 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.398 33.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3187 10654 1333 10252 24975 28910 28910 1 KAAVTPGK Unmodified 770.46504 0.46503826 1333 P09405;A0A087WRM5 Ncl Nucleolin yes no 0 0 0 1 10 0 1 36.353 36.353 3 0.056616 6425 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.579 22.769 29.931 22.454 0 34.299 35.99 33.085 28 23 0 32 37 32 1 1 0 1 1 1 2892.2 10655 1333 10253 24976 28911 28911 1 KACADATLSQITNNIDPVGR Deamidation (N) 2144.0532 0.053181143 1750 P62874;H3BKR2;H3BLF7 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 1 0 1 7.75 3.11 1 1 1 1 60.578 60.578 3 8.94E-10 21191 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.84 81.963 40.198 35.542 66.73 28.399 57.278 67.656 38 37 65 28 56 65 2 2 2 1 2 3 13506 10656 1750 10254 24977;24978;24979;24980 28912;28913;28914;28915 28912 681;682 4 KACADATLSQITNNIDPVGR Unmodified 2143.0692 0.069165558 1750 P62874;H3BKR2;H3BLF7 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 1 8.6 2.42 1 1 1 1 1 66.225 66.225 3 6.1461E-22 21520 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.79 113.13 89.752 222.12 226.25 192.67 230.25 192.53 84 218 223 186 231 185 2 6 4 4 3 3 112120 10657 1750 10254 24981;24982;24983;24984;24985 28916;28917;28918;28919;28920;28921 28918 6 KACGDSTLTQITAGLDPVGR Unmodified 2059.0368 0.036802797 1751 P62880;E9QKR0;D3Z1M1;D3Z1T4 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 1 8.57 2.06 1 1 2 2 1 66.447 66.447 3;4 1.2327E-12 22358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.13 94.299 532.47 458.68 499.79 245.2 704.8 560.5 500 463 483 232 692 538 5 4 4 3 5 6 119350 10658 1751 10255 24986;24987;24988;24989;24990;24991;24992 28922;28923;28924;28925;28926;28927;28928 28923 7 KADGSCSTDFK Unmodified 1214.5238 0.52375171 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 1 6 0 1 41.527 41.527 3 0.0015291 11408 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.987 38.294 88.31 61.978 73.411 55.976 45.545 0 83 65 74 56 46 0 1 1 1 1 1 0 3574.5 10659 2629 10256 24993 28929 28929 1 KADGSDLISADAEQR Unmodified 1574.7536 0.7536283 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 1 5 0 1 46.202 46.202 3 0.0028593 14127 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.281 25.92 20.292 18.848 0 19.898 46.222 28.529 19 19 0 19 46 28 1 1 0 1 1 1 3666.3 10660 721 10257 24994 28930 28930 1 KADIGIAMGISGSDVSK Unmodified 1647.8502 0.85017123 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 8.5 0.5 1 1 63.591 63.591 3 0.00065678 20379 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.554 41.862 68.948 82.029 97.719 39.417 120.11 135.15 65 83 93 37 121 130 1 2 1 1 2 2 7569.8 10661 2253 10258 24995;24996 28931;28932 28931 2 KADIGVAMGIAGSDVSK Unmodified 1617.8396 0.83960654 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 9.62 2.45 2 2 1 1 2 63.702 63.702 3;4 6.5699E-06 20443 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.508 64.205 839.14 467.65 937.11 448.92 940.22 704.2 788 482 908 455 936 676 8 6 8 7 9 7 153370 10662 106 10259 24997;24998;24999;25000;25001;25002;25003;25004 28933;28934;28935;28936;28937;28938;28939;28940;28941;28942 28935 10 KADIGVAMGIVGSDVSK Unmodified 1645.8709 0.87090667 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 1 8 0 1 69.291 69.291 4 4.1672E-05 22963 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.727 40.392 0 58.234 80.752 124.82 81.084 0 0 56 83 120 83 0 0 1 1 1 1 0 5228.5 10663 2699 10260 25005 28943 28943 1 KADPQEAINCLNAAIDIYTDMGR Unmodified 2578.2156 0.2155718 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 1 8.8 2.23 2 1 1 1 87.941 87.941 3;4 0.000151 32562 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.78 35.334 20.265 0 59.875 38.092 28 9 19 0 57 37 28 9 1 0 2 1 1 1 12483 10664 1478 10261 25006;25007;25008;25009;25010 28944;28945;28946;28947;28948 28945 5 KADVGFAMGIAGTDVAK Unmodified 1649.8447 0.84469192 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 1 13 0 2 65.471 65.471 3;4 1.1134E-08 23847 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.499 66.361 0 0 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 8620.1 10665 1096;1042;487;928 10262 25011;25012 28949;28950 28950 2 KAEAGAGSATEFQFR Unmodified 1568.7583 0.75831975 1785 P63325 Rps10 40S ribosomal protein S10 yes yes 0 0 0 1 6 0 1 49.562 49.562 3 0.011271 15111 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.337 24.291 38.861 55.388 94.235 64.458 51.602 116.85 37 56 93 65 56 111 1 1 1 1 1 1 3552.2 10666 1785 10263 25013 28951 28951 1 KAEAQIAAK Unmodified 928.53418 0.53418046 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 9 2.9 1 2 1 1 39.945 39.945 2;3;4 0.00063092 11034 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.43 62.086 657.82 644.36 704.94 568.85 716.35 863.27 620 656 705 566 734 829 5 4 4 4 4 6 142200 10667 1312 10264 25014;25015;25016;25017;25018 28952;28953;28954;28955;28956;28957 28952 6 KAEGAGTEEEGTPK Unmodified 1402.6576 0.65760265 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 7 3.89 1 1 2 1 2 36.079 36.079 3;4 1.1606E-16 10227 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.47 102.5 1299.1 1210.2 1391.2 1413.1 2234.2 1916.2 1224 1230 1374 1399 2255 1844 9 8 8 7 8 8 176520 10668 2769 10265 25019;25020;25021;25022;25023;25024;25025 28958;28959;28960;28961;28962;28963;28964;28965;28966;28967 28960 10 KAEGATLSNATGAVESTSQAGDR Deamidation (N) 2221.0458 0.045847158 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 1 0 1 5 0.707 1 2 1 49.576 49.576 3;4 1.6436E-18 15457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.696 67.864 48.966 45.841 51.737 107.2 63.999 20.254 46 47 55 102 65 19 1 2 2 2 1 1 10519 10669 2133 10266 25026;25027;25028;25029 28968;28969;28970;28971 28971 833 4 KAEGATLSNATGAVESTSQAGDR Unmodified 2220.0618 0.061831574 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 1 6.67 2.98 1 2 1 1 1 48.074 48.074 3;4 1.1718E-22 15119 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.41 106.46 148.38 193.98 250.26 186.05 173.22 164.05 140 190 251 180 177 158 4 5 6 4 4 3 73523 10670 2133 10266 25030;25031;25032;25033;25034;25035 28972;28973;28974;28975;28976;28977;28978 28975 7 KAFEEAEK Unmodified 950.47091 0.4709115 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 6 0 1 44.49 44.49 3 0.034316 12848 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.542 12.651 127.56 77.447 135.37 0 0 168.43 120 83 130 0 0 158 1 1 1 0 0 1 14888 10671 1875 10267 25036 28979 28979 1 KAFSGYLGPDESK Unmodified 1397.6827 0.68269519 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2 Esd S-formylglutathione hydrolase yes no 0 0 0 1 8 0 1 55.501 55.501 3 0.0044964 16474 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.641 38.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10672 1122 10268 25037 28980 28980 1 KAGIFQSAK Unmodified 948.53927 0.53926584 2893 Q9CPQ1 Cox6c Cytochrome c oxidase subunit 6C yes yes 0 0 0 1 10 0 1 47.685 47.685 3 0.0013242 10805 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.297 43.419 435.37 223.62 397.03 355.32 189.62 247.23 409 244 396 350 205 237 1 1 1 1 1 1 18699 10673 2893 10269 25038 28981 28981 1 KAGLAEAPLVTGQPGPGHGK Unmodified 1884.0217 0.02174508 1044 F8WHW6;O70161;E0CYP4 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 1 8 0 1 50.679 50.679 4 6.5854E-09 14182 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.514 59.457 0 0 135.18 123.1 0 108.73 0 0 130 120 0 102 0 0 1 1 0 1 8420.7 10674 1044 10270 25039 28982 28982 1 KAGPAWMVR Unmodified 1014.5433 0.54330536 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 11 0 1 47.664 47.664 3 0.033591 10637 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.591 28.823 0 88.312 0 124.6 0 0 0 83 0 114 0 0 0 1 0 1 0 0 9728.7 10675 2295 10271 25040 28983 28983 1 KAGPAWMVTR Unmodified 1115.591 0.59098383 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 11 0 1 48.867 48.867 3 0.027459 11129 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.727 31.544 0 375.79 370.22 0 0 0 0 359 363 0 0 0 0 1 1 0 0 0 27132 10676 2295 10272 25041 28984 28984 1 KAGPGGTR Unmodified 742.40859 0.40858602 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 1 9 0 1 23.347 23.347 3 0.020645 3447 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.494 51.021 0 0 0 75.417 0 77.818 0 0 0 69 0 73 0 0 0 1 0 1 7169.9 10677 1415 10273 25042 28985 28985 1 KAGQEQSASDPR Unmodified 1272.6058 0.60584185 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 10 3 1 1 25.789 25.789 3 0.023994 4056 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.5 2.2126 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 2444.1 10678 570 10274 25043;25044 28986;28987 28986 2 KAGQVFLEELGNHK Unmodified 1568.8311 0.83109076 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 9.33 1.89 1 1 2 1 1 60.064 60.064 3;4 2.1287E-05 17765 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.652 56.125 977.87 787.78 894.48 455.42 1232.4 1496.7 920 812 882 454 1226 1437 9 8 7 6 6 9 145260 10679 1390 10275 25045;25046;25047;25048;25049;25050 28988;28989;28990;28991;28992;28993;28994;28995;28996;28997 28994 10 KAHLFAK Unmodified 813.48611 0.48610806 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 1 11.5 0.5 1 1 42.701 42.701 4 0.012192 8659 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.234 51.332 118.79 61.15 0 121.32 0 238.73 111 65 0 111 0 232 1 1 0 1 0 2 11502 10680 305 10276 25051;25052 28998;28999 28998 2 KAHLGTALK Unmodified 937.5709 0.57090032 1717 P62267 Rps23 40S ribosomal protein S23 yes yes 0 0 0 1 10 0 1 41.372 41.372 4 0.00064946 8308 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.15 66.178 133.67 89.939 0 114.93 107.38 100.34 125 93 0 107 111 97 1 1 0 1 1 1 6422.5 10681 1717 10277 25053 29000 29000 1 KAHPNLPILIR Unmodified 1270.7874 0.78737546 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 1 11.5 0.5 1 1 50.2 50.2 4 0.0011518 10340 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.103 52.952 417.76 110.4 386.91 0 627.6 0 392 111 359 0 600 0 2 1 1 0 2 0 43852 10682 2914 10278 25054;25055 29001;29002 29002 2 KAHQLWLSVEALK Unmodified 1521.8667 0.86674799 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 1 10.5 0.5 1 1 68.815 68.815 3;4 0.00081545 19882 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.891 41.938 89.059 0 0 69.827 64.782 0 83 0 0 65 65 0 1 0 0 1 1 0 6624.1 10683 2517 10279 25056;25057 29003;29004 29003 2 KAIPAGCGDEEEEEEESILDTVLK Unmodified 2660.2375 0.23747226 1835 P84086 Cplx2 Complexin-2 yes yes 0 0 0 1 7.12 3.52 2 2 1 1 2 80.933 80.933 3;4 3.1239E-28 31007 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.98 110.42 148.49 296.96 234.24 246.11 91.383 308.01 139 288 231 232 93 297 4 6 5 5 3 6 78731 10684 1835 10280 25058;25059;25060;25061;25062;25063;25064;25065 29005;29006;29007;29008;29009;29010;29011;29012;29013;29014;29015;29016 29015 12 KAIPPGCGDEPEEEDESILDTVIK Unmodified 2640.2476 0.24764301 1767 P63040 Cplx1 Complexin-1 yes yes 0 0 0 1 5 1 1 1 74.498 74.498 4 4.3191E-08 27543 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.136 46.826 20.319 22.261 89.543 43.052 27.488 69.572 19 23 84 42 28 66 1 2 2 2 1 3 5840.5 10685 1767 10281 25066;25067 29017;29018;29019 29018 3 KALCSFQIYSVPWK Unmodified 1725.8912 0.89124818 1430 P21460 Cst3 Cystatin-C yes yes 0 0 0 1 1 0 1 77.681 77.681 4 0.039418 27012 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 34.685 16.32 9.5583 19.571 0 40.441 0 0 9 19 0 37 0 0 1 1 0 1 0 0 1288.1 10686 1430 10282 25068 29020 29020 1 KALHLVGLK Unmodified 977.63859 0.63858595 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 1 1 0 1 63.121 63.121 4 0.023737 21267 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.198 34.972 39.238 35.93 47.418 0 37.054 47.979 37 37 46 0 37 46 1 1 1 0 1 1 3603.8 10687 1412 10283 25069 29021 29021 1 KAMEAVAAQGK Unmodified 1102.5805 0.58047873 3126;1246 O70250;Q9DBJ1 Pgam2;Pgam1 Phosphoglycerate mutase 2;Phosphoglycerate mutase 1 no no 0 0 0 1 13 0 1 43.807 43.807 3 0.0005227 13274 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.43 48.853 331.57 250.97 325.65 159.51 191.99 287.67 312 262 323 167 200 275 1 1 1 1 1 1 20206 10688 1246;3126 10284 25070 29022 29022 1 KANIPIMDTGENPEVPFPR Unmodified 2124.0674 0.067374644 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 10 3 1 1 67.628 67.628 3;4 2.9328E-29 23256 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.37 94.668 0 48.944 0 70.276 40.864 117.16 0 46 0 65 46 111 0 1 0 1 1 1 8603.8 10689 1151 10285 25071;25072 29023;29024 29023 2 KAPPPPK Unmodified 733.44866 0.44865992 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3;A0A1L1SQP7 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 1 9 0 1 34.47 34.47 3 0.037761 6487 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.268 32.03 0 67.939 73.021 66.693 0 88.478 0 65 74 65 0 83 0 1 1 1 0 1 2668.4 10690 2343 10286 25073 29025 29025 1 KAPPQGR Unmodified 752.42932 0.42932146 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 9 0.816 1 1 1 24.847 24.847 3 0.0061363 3699 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.69 61.406 1017 1327.1 524.82 1260.6 992.34 792.5 957 1320 566 1199 1008 770 4 4 3 4 3 3 112420 10691 1554 10287 25074;25075;25076 29026;29027;29028;29029 29029 4 KAPPSQPPR Unmodified 976.54541 0.54541385 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 9.5 1.12 1 1 1 1 30.244 30.244 3 0.00050006 5162 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.57 67.855 590.48 568.03 236.46 606.31 255.05 706.94 554 575 241 572 261 670 3 4 3 4 3 4 74146 10692 1362 10288 25077;25078;25079;25080 29030;29031;29032;29033;29034 29031 5 KAPQHTAVGFK Unmodified 1182.6509 0.65094155 1378 P14685;F7B7L8 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes no 0 0 0 1 10 0 1 38.731 38.731 4 0.00063232 7319 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.942 43.972 78.487 47.067 113.91 66.649 105.23 105.73 74 51 111 69 107 102 1 1 1 1 1 1 5241.7 10693 1378 10289 25081 29035 29035 1 KAPSSSSQR Unmodified 946.48321 0.48320752 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 1 8 0 1 21.895 21.895 3 0.030034 3239 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.066 25.369 7.3745 17.454 8.1503 11.299 12.689 11.364 7 17 9 11 13 11 1 1 1 1 1 1 550.06 10694 464 10290 25082 29036 29036 1 KAQALPK Unmodified 754.47012 0.47012364 1626 P55264 Adk Adenosine kinase yes yes 0 0 0 1 10 0 1 38.499 38.499 3 0.056964 7259 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.301 30.181 234.97 162.33 225.81 199.27 196.16 204.4 221 171 227 198 203 197 1 1 1 1 1 1 12724 10695 1626 10291 25083 29037 29037 1 KAQALQEECGYLR Unmodified 1564.7668 0.76677595 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 1 7 0 1 49.558 49.558 3 0.0055182 14230 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.729 39.853 39.174 35.753 58.249 0 65.675 67.416 37 37 56 0 65 65 1 1 1 0 1 1 2748.2 10696 1415 10292 25084 29038 29038 1 KAQFFLGTTNK Unmodified 1253.6768 0.67682195 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 1 12 0 1 57.276 57.276 4 0.00063232 13093 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.942 42.645 38.865 105.05 51.548 57.14 52.965 86.967 37 102 56 56 56 83 1 1 1 1 1 1 2824.2 10697 3077 10293 25085 29039 29039 1 KAQGWQGLK Unmodified 1014.5611 0.56106391 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 1 11 0 1 47.626 47.626 3 0.0012791 10615 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.692 48.812 169.53 0 0 151.93 0 0 158 0 0 139 0 0 1 0 0 1 0 0 14776 10698 2952 10294 25086 29040 29040 1 KASAFNSWFENAEEDLTDPVR Unmodified 2425.1186 0.11861817 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.33 0.471 2 1 84.393 84.393 3;4 9.7267E-11 30899 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.107 73.417 58.785 104.41 45.648 0 0 39.442 56 102 46 0 0 37 3 3 2 0 0 1 12373 10699 551 10295 25087;25088;25089 29041;29042;29043;29044 29042 4 KASESELER Unmodified 1047.5197 0.51965261 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 13 0 1 32.546 32.546 3 0.03524 7795 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.167 12.294 0 97.042 114.28 0 77.404 0 0 93 111 0 74 0 0 1 1 0 1 0 3955 10700 3266 10296 25090 29045 29045 1 KASVVTLPVYLNFTR Unmodified 1706.9719 0.97194134 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 6.5 5.5 1 1 74.252 74.252 3;4 0.0011774 25575 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.691 51.714 0 0 0 77.231 55.674 18.665 0 0 0 74 56 19 0 0 0 2 1 1 9339 10701 3204 10297 25091;25092 29046;29047 29046 2 KATDAEADVASLNR Unmodified 1459.7267 0.72668527 905;1656;471 E9Q452;E9Q454;Q8BSH3;P58771;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin beta chain no no 0 0 0 1 5.5 0.5 1 1 47.337 47.337 3 0.0041866 14020 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.859 35.648 59.101 122.17 155.01 162.36 0 168.43 56 121 157 157 0 158 1 2 2 2 0 2 7736.2 + 10702 905;1656;471 10298 25093;25094 29048;29049 29049 2 KATGVSAEDADPR Unmodified 1315.6368 0.63680763 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 5 0 1 35.724 35.724 3 0.021028 9066 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.189 5.6486 0 0 47.659 47.438 0 69.29 0 0 46 46 0 65 0 0 1 1 0 1 7832.9 10703 2028 10299 25095 29050 29050 1 KATVNLLGDEK Unmodified 1186.6558 0.65575216 1073 G3X8R0 Reep5 Receptor expression-enhancing protein yes yes 0 0 0 1 8 0 1 54.191 54.191 3 0.013821 15847 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.828 21.305 200.11 0 270.57 0 259.83 231.37 188 0 251 0 256 224 1 0 1 0 1 1 15630 10704 1073 10300 25096 29051 29051 1 KAVDVFFPPEAQNDFPVAMQISEK Unmodified 2706.3363 0.33633886 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 8.33 2.13 3 2 1 85.167 85.167 3;4;5 4.5817E-10 31361 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.035 51.602 118.22 74.673 250.42 152.52 116.11 263.19 111 74 241 149 121 250 4 2 6 4 4 6 38613 10705 2185 10301 25097;25098;25099;25100;25101;25102 29052;29053;29054;29055;29056;29057;29058 29055 7 KAVEEPLNAFK Unmodified 1244.6765 0.6764876 398;400 A0A2R8VK70;A0A2R8W6P0 no no 0 0 0 1 8 0 1 58.004 58.004 3 0.010794 17754 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.122 33.924 87.865 110.39 107.08 133.71 106 115.3 83 111 111 130 111 111 1 1 1 1 1 1 9441.6 10706 398;400 10302 25103 29059 29059 1 KAVIQLTTK Unmodified 1000.6281 0.62808085 2641 Q8R1F6;F6RGN1 Hid1 Protein HID1 yes no 0 0 0 1 11 0 1 51.736 51.736 3 0.012054 12391 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.78 43 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 3825.2 10707 2641 10303 25104 29060 29060 1 KAVLAALK Unmodified 812.54837 0.54837396 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 1 1 0 1 59.219 59.219 3 0.0060946 19264 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.318 35.601 39.465 26.847 288.69 279.65 139.65 211.35 37 28 280 274 151 202 1 1 2 2 1 1 14849 10708 3383 10304 25105 29061;29062 29061 2 KAVLGPLVGAVDQGTSSTR Unmodified 1855.0163 0.016325351 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 1 11 0 1 63.516 63.516 3 3.0245E-07 17168 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.453 76.873 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 9488.5 10709 583 10305 25106 29063 29063 1 KAVLYMCK Unmodified 1011.5245 0.52454375 1175 O09114 Ptgds Prostaglandin-H2 D-isomerase yes yes 0 0 0 1 12 0 1 53.033 53.033 3 0.021739 11475 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.621 45.751 56.53 0 56.898 76.514 51.923 0 53 0 56 74 53 0 1 0 1 1 1 0 4883.7 10710 1175 10306 25107 29064 29064 1 KAVTPAPPMK Unmodified 1038.5896 0.58958685 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 1 10 0 1 44.982 44.982 3 0.0042329 9773 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.01 35.785 33.725 41.282 67.683 0 51.2 62.499 32 42 65 0 51 60 1 1 1 0 1 1 5680 10711 3380 10307 25108 29065 29065 1 KAVVVCPK Unmodified 899.52626 0.52625831 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 1 10.5 0.5 1 1 43.259 43.259 3 0.0058293 8948 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.429 61.935 524.83 275.24 645.46 236.78 401.27 714.5 494 276 624 239 406 681 2 1 2 1 1 2 48434 10712 2714 10308 25109;25110 29066;29067 29067 2 KAWGNNQDGVVASQPAR Unmodified 1796.8918 0.89179354 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 1 8 0 1 43.599 43.599 3 5.4558E-08 10876 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.84 92.685 39.414 56.926 0 0 0 49.036 37 56 0 0 0 46 1 1 0 0 0 1 7490.9 10713 1681 10309 25111 29068 29068 1 KAWNIWADIPAPK Unmodified 1508.814 0.81398414 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3;E9Q1G1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 1 10.8 0.748 2 2 1 76.019 76.019 3;4 9.9155E-05 22598 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.814 58.845 128.74 205.9 84.612 216.75 129.39 312.91 121 203 83 204 130 297 2 3 1 2 2 4 52760 10714 3122 10310 25112;25113;25114;25115;25116 29069;29070;29071;29072;29073 29072 5 KAYGLALAK Unmodified 933.56475 0.56475231 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 9.4 4.32 1 1 1 1 1 53.345 53.345 3 0.00044021 11461 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.22 50.06 1147.4 1328.4 650.73 1247 1719.3 1974.4 1075 1326 645 1185 1746 1917 5 7 4 7 7 8 239370 10715 1537 10311 25117;25118;25119;25120;25121 29074;29075;29076;29077;29078;29079;29080;29081;29082 29080 9 KAYHLACK Unmodified 989.51167 0.51167088 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 1 10 0.816 1 1 1 38.671 38.671 3;4 0.028962 7438 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.418 27.372 470.01 210.96 356.46 410.67 397.47 453.43 441 213 358 402 412 436 4 3 3 4 3 3 33540 10716 2133 10312 25122;25123;25124 29083;29084;29085;29086 29085 4 KCAYQILVQVK Unmodified 1348.7537 0.75369207 2080 Q60676 Ppp5c Serine/threonine-protein phosphatase 5 yes yes 0 0 0 1 11.7 0.471 1 2 62.391 62.391 3;4 0.00013881 15085 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.015 72.534 68.994 221.68 81.628 108.02 157.01 95.952 65 214 84 102 158 93 1 3 2 2 3 2 9752.7 10717 2080 10313 25125;25126;25127 29087;29088;29089 29088 3 KCGAGDPSK Unmodified 918.42292 0.42291545 1880 Q03137;A0A087WQW6 Epha4 Ephrin type-A receptor 4 yes no 0 0 0 1 1 0 1 29.149 29.149 4 0.062448 6284 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 37.722 13.34 29.832 7.0676 29.722 0 0 20.254 28 9 28 0 0 19 1 1 1 0 0 1 2691 10718 1880 10314 25128 29090 29090 1 KCLEELQK Unmodified 1046.543 0.54303059 3312 Q9R1P3 Psmb2 Proteasome subunit beta type-2 yes yes 0 0 0 1 7 0 1 49.193 49.193 3 0.05308 14126 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.683 15.326 78.702 53.062 72.699 85.041 71.517 57.655 74 56 74 83 74 56 1 1 1 1 1 1 3118.8 10719 3312 10315 25129 29091 29091 1 KCSTPEEIK Unmodified 1090.5329 0.53285983 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 1 13 0 1 38.976 38.976 3 0.034074 11011 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.391 13.64 78.665 0 123.93 123.75 59.325 86.785 74 0 120 121 65 83 1 0 1 1 1 1 12451 10720 3301 10316 25130 29092 29092 1 KCVQSNIVLLTQAFR Unmodified 1775.9716 0.97162377 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1 6.5 5.5 1 1 71.827 71.827 3 0.0014635 18278 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.867 41.134 0 0 9.738 0 9.414 56 0 0 9 0 9 56 0 0 1 0 1 1 7921.7 10721 789 10317 25131;25132 29093;29094 29094 2 KDAHSNLLAK Unmodified 1095.6037 0.60365701 1238 O55126;Q7TMG8;A0A0G2JEV1 Gbas Protein NipSnap homolog 2 yes no 0 0 0 1 10.5 2.5 1 1 41.027 41.027 3;4 0.0007823 11430 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.653 38.736 208.43 238.52 294.1 194.14 336.01 220.67 197 242 294 196 337 216 2 2 2 1 2 2 15589 10722 1238 10318 25133;25134 29095;29096 29096 2 KDAHSTLLSK Unmodified 1098.6033 0.60332266 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 1 8 0 1 42.601 42.601 4 0.0018713 10361 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.289 25.712 0 69.16 0 111.49 0 0 0 65 0 102 0 0 0 1 0 1 0 0 3307.7 10723 1237 10319 25135 29097 29097 1 KDDEENYLDLFSHK Unmodified 1751.8002 0.80024414 2085 Q60749 Khdrbs1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 yes yes 0 0 0 1 9 4 1 1 65.525 65.525 4 0.034559 23618 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.022 18.09 225.96 167.11 294.01 144.53 194.53 242.83 213 176 288 149 199 233 2 2 2 1 1 2 13061 10724 2085 10320 25136;25137 29098;29099 29098 2 KDDESNLVEEK Unmodified 1304.6096 0.60958983 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447 Klc1 Kinesin light chain 1 yes no 0 0 0 1 4 0 1 46.882 46.882 3 0.0027457 14770 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.708 22.414 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10725 923 10321 25138 29100 29100 1 KDDPLTNLNTAFDVAER Unmodified 1917.9432 0.94321999 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 70.364 70.364 3 2.3163E-06 24181 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.238 55.7 98.96 85.836 171.74 123.7 105.07 204.87 93 84 167 120 111 195 2 2 3 3 3 4 31318 10726 418 10322 25139;25140;25141;25142 29101;29102;29103;29104 29103 4 KDDPVTNLNNAFEVAEK Unmodified 1902.9323 0.93232095 310 A0A1L1SV25;P57780;D3Z0L8 Actn4 Alpha-actinin-4 no no 0 0 0 1 6 1 1 1 67.71 67.71 4 5.1524E-06 24471 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.563 64.105 108.21 63.396 153.67 47.452 75.098 67.147 102 65 148 46 74 65 2 1 2 1 1 1 6328.9 10727 310 10323 25143;25144 29105;29106 29105 2 KDEWGLAAPISPGPLTPMR Unmodified 2035.0561 0.056081676 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 10.5 2.5 1 1 72.678 72.678 3 2.4235E-05 24696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.954 52.327 108.52 50.373 113.27 73.291 44.658 87.204 102 56 111 74 46 83 2 2 2 2 1 2 14931 10728 1424 10324 25145;25146 29107;29108 29107 2 KDFPLTGYVELR Unmodified 1436.7664 0.76636524 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 1 8 0 1 67.57 67.57 3 0.00047617 22192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.401 50.487 88.126 51.754 112.92 81.576 128.29 114.67 83 56 111 83 130 111 1 1 1 1 1 1 6228 10729 3152 10325 25147 29109 29109 1 KDGADFAK Unmodified 850.41848 0.418482 1309;1308 P05063;P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5 Aldoc;Aldoa;Aldoart1 Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 1 7 0.816 1 1 1 42.95 42.95 3 0.0159 11179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.614 33.31 2071.4 1416.1 1593.7 1925.7 2049.3 2231.3 1946 1457 1621 1884 2117 2148 4 3 3 4 4 4 147560 10730 1308;1309 10326 25148;25149;25150 29110;29111;29112;29113 29111 4 KDHADVSNQLYACYAIGK Unmodified 2051.9735 0.97347426 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 1 9 0 1 56.07 56.07 4 1.6382E-06 15984 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.942 44.468 99.333 0 76.666 65.126 71.774 76.836 93 0 74 65 74 74 1 0 1 1 1 1 7581 10731 1741 10327 25151 29114 29114 1 KDITAALAAER Unmodified 1157.6404 0.64043645 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 7.5 0.5 1 1 52.973 52.973 3 0.0011057 15232 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.803 46.651 320.91 285.35 284.63 395.21 226.42 279.23 302 293 289 381 239 268 2 2 1 2 1 1 47012 10732 118;1534 10328 25152;25153 29115;29116 29116 2 KDLEQGVVGAHGLLCR Unmodified 1750.9148 0.91483717 2781 Q91Z53;D6REG4 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 1 8 0 1 55.465 55.465 4 0.0083908 16427 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.422 21.316 0 88.312 0 0 150.89 114.02 0 83 0 0 148 111 0 1 0 0 1 1 5566 10733 2781 10329 25154 29117 29117 1 KDLTTFLYHLR Unmodified 1405.7718 0.77178497 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 11 0.816 1 1 1 67.724 67.724 4 0.0013662 19567 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.435 33.573 148.58 47.988 79.621 110.47 148.8 154.59 139 47 74 102 149 149 3 2 1 2 2 3 27738 10734 2727 10330 25155;25156;25157 29118;29119;29120;29121 29118 4 KDLYANTVLSGGTTMYPGIADR Unmodified 2342.1576 0.15764621 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 1 8.4 4.1 2 1 1 1 1 1 2 1 69.541 69.541 3;4 6.9733E-23 25462 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.81 108.31 170.13 137.41 298.29 279.58 324.18 341.34 159 131 286 267 325 324 4 4 5 6 8 5 364800 10735 1673;1781 10331 25158;25159;25160;25161;25162;25163;25164;25165;25166;25167 29122;29123;29124;29125;29126;29127;29128;29129;29130;29131;29132;29133 29133 12 KDLYANTVLSGGTTMYPGIADR Deamidation (N) 2343.1417 0.1416618 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 1 7 0 1 69.312 69.312 4 0.0013816 23620 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.813 29.583 39.414 56.926 0 90.069 34.565 0 37 56 0 83 37 0 1 1 0 1 1 0 5888 10736 1673;1781 10331 25168 29134 29134 642 1 KDLYANTVLSGGTTMYPGIADR Oxidation (M) 2358.1526 0.15256084 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 1 8.5 0.5 1 1 65.213 65.213 3 1.447E-05 21126 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.922 50.562 29.865 28.687 96.252 56.175 27.961 68.492 28 28 93 55 28 65 1 1 2 1 1 2 18612 10737 1673;1781 10331 25169;25170 29135;29136 29135 118 2 KDNFFIELGQPQWLK Unmodified 1861.9727 0.97266962 2619 Q8K596 Slc8a2 yes yes 0 0 0 1 9 0 1 83.326 83.326 3 0.00014384 28806 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.281 48.06 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 2643.2 10738 2619 10332 25171 29137 29137 1 KDPELWGSVLLESNPYR Unmodified 2002.016 0.015991 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 8.33 0.471 2 1 77.291 77.291 3;4 2.2702E-06 26867 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.007 68.776 427.18 292.23 271.99 229.46 198.07 488.97 401 306 262 213 196 464 3 3 2 2 1 3 46184 10739 2185 10333 25172;25173;25174 29138;29139;29140 29139 3 KDPSASATSK Unmodified 990.49819 0.49818889 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 1 7.5 0.5 1 1 34.171 34.171 3 1.1161E-05 6469 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.334 60.657 79.032 73.407 0 0 125.52 0 74 74 0 0 120 0 1 1 0 0 1 0 7024.2 10740 2602 10334 25175;25176 29141;29142 29142 2 KDQLDSVSGR Unmodified 1103.5571 0.55710075 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 6 0 1 39.397 39.397 3 0.0033681 10413 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.29 38.33 88.542 102.56 0 88.674 108.73 96.035 83 102 0 83 111 93 1 1 0 1 1 1 5646.9 10741 570 10335 25177 29143 29143 1 KDQVAYLIQQNVIPPFCNLLTVK Unmodified 2700.4673 0.46729345 75 O35343;A0A0B4J1E7 Kpna4 Importin subunit alpha-3 yes no 0 0 0 1 12 0 1 94.758 94.758 4 2.2413E-06 27273 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.266 39.202 0 22.253 5.4667 26.709 15.417 5.33 0 21 6 25 15 5 0 2 1 2 1 1 1737.6 10742 75 10336 25178 29144;29145 29145 2 KDVIVQDDDVDCTLVEK Unmodified 1989.9565 0.95648679 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 1 5 0 1 63.458 63.458 3 0.00058192 22397 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.437 44.392 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2292.6 10743 1783 10337 25179 29146 29146 1 KDYEEIGPSICR Unmodified 1465.6871 0.68712864 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 1 13 0 1 49.22 49.22 3 0.0074854 15939 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.972 41.946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10744 2836 10338 25180 29147 29147 1 KEAAENSLVAYK Unmodified 1321.6878 0.68778057 1715 P62259 Ywhae 14-3-3 protein epsilon yes yes 0 0 0 1 8.5 2.69 1 1 1 1 52.199 52.199 3;4 4.4871E-08 16800 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.83 78.422 257 501.12 492.57 449.89 328.69 619.56 241 495 488 436 335 590 2 4 3 3 2 4 41719 10745 1715 10339 25181;25182;25183;25184 29148;29149;29150;29151 29148 4 KEDDSLTIFGVAER Unmodified 1578.789 0.78895118 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 1 13 0 1 63.671 63.671 3 0.0023539 22971 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.495 20.771 0 0 125.34 101.07 156.39 123.46 0 0 120 102 158 120 0 0 1 1 1 1 8244.2 10746 20;2354 10340 25185 29152 29152 1 KEDGTFYEFGDDIPEAPER Unmodified 2213.9753 0.97530798 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 3 0 1 66.372 66.372 4 0.00040557 24152 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.592 38.724 20.292 57.933 16.894 29.597 29.288 59.696 19 56 19 28 28 56 1 2 1 1 1 1 3365.7 10747 2441 10341 25186 29153;29154 29154 2 KEDLVFIFWAPENAPLK Unmodified 2016.072 0.072049316 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 10.2 1.75 2 3 2 1 1 2 91.469 91.469 3;4 3.1473E-08 32476 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.33 95.383 350.5 531.28 416.32 432.88 341.15 376.85 329 519 417 414 342 358 8 14 11 14 11 11 113390 10748 1410 10342 25187;25188;25189;25190;25191;25192;25193;25194;25195;25196;25197 29155;29156;29157;29158;29159;29160;29161;29162;29163;29164;29165;29166;29167;29168;29169;29170;29171;29172;29173;29174;29175;29176;29177 29166 23 KEDLVFIFWAPESAPLK Unmodified 1989.0612 0.061150279 1549 P45591 Cfl2 Cofilin-2 yes yes 0 0 0 1 13 0 1 90.653 90.653 3 0.016821 35932 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.323 17.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2777.9 10749 1549 10343 25198 29178 29178 1 KEDQGIYTCVATNILGK Unmodified 1908.9615 0.96151259 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 1 8.5 0.5 1 1 69.818 69.818 3 7.5446E-06 23325 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.391 69.499 29.904 27.776 37.476 97.162 119.78 37.076 28 28 37 93 120 37 1 1 1 2 2 1 12771 10750 20;2354 10344 25199;25200 29179;29180 29179 2 KEEEEEEEEASK Unmodified 1464.6104 0.61037769 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 4.5 3.86 2 2 1 1 39.121 39.121 3;4 1.1471E-12 11985 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 124.81 83.72 988.23 504.84 653.86 701.51 925.63 1000.1 927 518 652 683 945 963 8 3 5 5 5 7 87283 10751 1557 10345 25201;25202;25203;25204;25205;25206 29181;29182;29183;29184;29185;29186;29187;29188 29182 8 KEEGEAFAR Unmodified 1035.4985 0.49852324 1617 P53994 Rab2a Ras-related protein Rab-2A yes yes 0 0 0 1 7.33 4.03 1 1 1 37.041 37.041 3 0.0020377 10511 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.24 58.923 577.61 484.74 433.67 367.27 706.93 701.51 543 499 436 367 715 677 3 3 2 2 3 3 55100 10752 1617 10346 25207;25208;25209 29189;29190;29191 29189 3 KEELMFFLWAPEQAPLK Unmodified 2076.0754 0.075420135 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 1 9.67 0.471 1 2 94.991 94.991 3;4 4.2176E-06 31124 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.41 65.814 40.652 20.216 20.456 24.97 32.529 34.774 38 19 19 23 32 33 2 1 1 2 3 2 7676.8 10753 3301 10347 25210;25211;25212 29192;29193;29194;29195;29196 29194 5 KEEPSNNVK Unmodified 1043.5247 0.52473799 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 1 5 0 1 35.001 35.001 3 0.00931 8723 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.595 41.036 0 48.944 0 49.249 54.683 47.476 0 46 0 46 56 46 0 1 0 1 1 1 2915.7 10754 1798 10348 25213 29197 29197 1 KEEQQLEPK Unmodified 1127.5823 0.58225287 2748 Q91VZ6;D3YVX4 Smap1 Stromal membrane-associated protein 1 yes no 0 0 0 1 8 3.56 1 1 1 40.061 40.061 3 0.008062 10981 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.786 33.372 176.57 173.47 213.36 263.04 263.22 146.2 166 176 204 250 268 139 2 2 2 2 3 1 18538 10755 2748 10349 25214;25215;25216 29198;29199;29200 29200 3 KEGGLGPLNIPLLADVTK Unmodified 1834.0564 0.056399252 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 1 10.2 1.79 1 3 1 1 2 83.4 83.4 3;4;5 3.2457E-09 29018 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.65 92.571 400.03 676.25 680.38 349.36 642.95 633 377 668 677 343 639 608 7 10 9 6 8 10 174220 10756 2116 10350 25217;25218;25219;25220;25221;25222;25223;25224 29201;29202;29203;29204;29205;29206;29207;29208;29209;29210;29211;29212 29205 12 KEIEDAAQFATADPEPPLEELGYHIYSSDPPFEVR Unmodified 3959.8741 0.87414395 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 4.5 0.5 1 1 86.579 86.579 4 0.014278 32885 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 24.149 21.166 0 20.216 0 9.837 9 0 0 19 0 9 9 0 0 1 0 1 1 0 3453.9 10757 1520 10351 25225;25226 29213;29214 29214 2 KELEEDFIR Unmodified 1177.5979 0.59790293 2931 Q9CQI6 Cotl1 Coactosin-like protein yes yes 0 0 0 1 7.67 3.86 1 1 1 56.278 56.278 3 0.0057495 18367 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.781 36.67 619.37 389.38 169.66 412.56 529.72 592.5 580 399 166 390 544 570 3 2 2 2 3 3 29327 10758 2931 10352 25227;25228;25229 29215;29216;29217 29216 3 KELEQIFCQFDSK Unmodified 1670.7974 0.79740737 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 1 8 0 1 79.001 79.001 3 0.026255 27538 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.33 27.192 60.088 0 0 49.256 54.316 58.146 56 0 0 46 56 56 1 0 0 1 1 1 3348 10759 2074 10353 25230 29218 29218 1 KELIINEILVMR Unmodified 1469.864 0.8639708 1099;2106 G5E884;O88643;Q61036;A3KGC5 Pak1;Pak3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 0 0 1 10 0 1 81.73 81.73 3 0.000412 25791 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.815 58.324 108.57 39.726 113.49 82.652 69.282 125.94 102 46 111 83 74 120 1 1 1 1 1 1 7890.2 10760 1099;2106 10354 25231 29219 29219 1 KELIVDAEDTWIR Unmodified 1586.8304 0.83042206 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 1 6 0 1 76.161 76.161 3 0.0059089 27668 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.828 38.952 39.701 0 0 58.887 65.285 0 37 0 0 55 65 0 1 0 0 1 1 0 3738.4 10761 2479 10355 25232 29220 29220 1 KELNYFAK Unmodified 1011.5389 0.53893149 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 9.5 0.5 1 1 54.704 54.704 3 0.011313 13500 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.943 34.607 212.45 192.16 216.17 488.8 348.79 550.76 198 184 221 465 373 526 1 1 1 2 2 2 52276 10762 1334 10356 25233;25234 29221;29222 29222 2 KELSANTAAFAK Unmodified 1249.6667 0.6666512 2978 Q9CWK8 Snx2 Sorting nexin-2 yes yes 0 0 0 1 1 0 1 101.33 101.33 3 0.041614 34025 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 43.544 7.2594 30.854 17.648 29.189 21.873 23.053 0 29 19 29 22 23 0 1 1 1 1 1 0 2644.7 10763 2978 10357 25235 29223 29223 1 KELSDIAHR Unmodified 1067.5724 0.57235688 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 10 3 1 1 38.368 38.368 4 0.00289 9408 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.893 52.117 378.03 167.88 341.84 267.08 348.83 358.88 355 174 338 269 357 346 2 1 2 2 2 2 25655 10764 1309 10358 25236;25237 29224;29225 29224 2 KEMASGVNTR Unmodified 1091.5393 0.53934219 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 7 0 1 34.328 34.328 3 0.01256 7216 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.476 19.909 78.338 131.92 66.97 107.49 0 127.92 74 130 74 102 0 120 1 1 1 1 0 1 6121.1 10765 1151 10359 25238 29226 29226 1 KEMQPTHPIR Oxidation (M) 1251.6394 0.63939059 1005;1773;2944 Q9CQV8;P63101;F6VW30;P68254;F6YY69 Ywhab;Ywhaz;Ywhaq 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein theta no no 0 0 1 1 6 0 1 28.933 28.933 4 0.031209 5562 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.715 15.329 0 0 0 29.762 44.743 58.419 0 0 0 28 46 56 0 0 0 1 1 1 2049.6 10766 2944;1773;1005 10360 25239 29227 29227 47 1 KEMQPTHPIR Unmodified 1235.6445 0.64447597 1005;1773;2944 Q9CQV8;P63101;F6VW30;P68254;F6YY69 Ywhab;Ywhaz;Ywhaq 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta;14-3-3 protein theta no no 0 0 0 1 7.5 0.5 1 1 33.105 33.105 4 0.00089085 6014 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.062 52.208 256.68 101.73 235.04 192.85 275.64 183.24 241 102 232 194 278 176 2 1 2 2 2 1 25669 10767 2944;1773;1005 10360 25240;25241 29228;29229 29229 2 KEPALLELEGK Unmodified 1225.6918 0.69180331 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 1 6.67 0.471 1 2 62.56 62.56 3;4 0.00055683 20368 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.76 54.097 458.75 199.77 274.06 251.9 302.6 293.64 430 213 273 250 310 281 3 2 2 2 3 2 25041 10768 1536 10361 25242;25243;25244 29230;29231;29232 29232 3 KEPFELEAFYTNLHEVPYPDPR Unmodified 2690.3017 0.30166791 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 1 7 0 1 75.867 75.867 4 0.010242 26645 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.665 20.477 29.742 27.324 27.655 19.119 0 39.442 28 28 28 19 0 37 1 1 1 1 0 1 5160.5 10769 1581 10362 25245 29233 29233 1 KEPSTVSR Unmodified 902.48214 0.48214489 1424 P20357;G3UZV6;G3UWW1 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 7 0 1 28.171 28.171 3 0.0035122 4628 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.88 46.762 187.83 201.2 0 280.95 171.85 315.96 176 201 0 260 187 301 1 1 0 1 1 1 24715 10770 1424 10363 25246 29234 29234 1 KESGLHK Unmodified 797.43955 0.43955179 278 G3UYW1;A0A1D5RLV7;Q6VNB8 Wdfy3 WD repeat and FYVE domain-containing protein 3 yes no 0 0 0 1 1 0 1 44.593 44.593 4 0.02912 12903 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.495 26.123 29.807 0 39.884 0 0 0 28 0 37 0 0 0 1 0 1 0 0 0 2087.8 10771 278 10364 25247 29235 29235 1 KESYSIYVYK Unmodified 1278.6496 0.64960415 2541 Q8CGP0;Q9D2U9;Q64524 Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E yes no 0 0 0 1 9 0 1 56.201 56.201 3 0.0039525 16046 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.815 48.443 128.41 70.078 0 109.22 120.5 0 120 74 0 102 120 0 1 1 0 1 1 0 9143.1 10772 2541 10365 25248 29236 29236 1 KESYSVYVYK Unmodified 1264.634 0.63395408 1349;1350 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;Q6ZWY9;Q64525;Q64478;P10854 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M no no 0 0 0 1 9.6 1.85 2 1 1 1 53.401 53.401 3;4 4.366E-05 14714 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.36 80.567 1248.9 1293.5 1082.7 1797.6 2167.8 1691.7 1176 1300 1093 1741 2207 1642 5 4 4 5 5 4 181850 10773 1349;1350 10366 25249;25250;25251;25252;25253 29237;29238;29239;29240;29241 29239 5 KETSNLYK Unmodified 981.51311 0.51311067 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 1 10.5 2.5 1 1 40.538 40.538 3 0.022179 9601 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.27 31.383 226.26 198.18 216.7 235.21 231.87 0 213 204 222 231 232 0 2 2 2 2 2 0 22179 10774 1237 10367 25254;25255 29242;29243 29242 2 KETSSLYK Unmodified 954.50221 0.50221163 1238 O55126;Q7TMG8;A0A0G2JEV1 Gbas Protein NipSnap homolog 2 yes no 0 0 0 1 13 0 1 40.84 40.84 3 0.050337 11874 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.539 23.236 0 232.9 388.53 0 0 0 0 225 372 0 0 0 0 1 1 0 0 0 11037 10775 1238 10368 25256 29244 29244 1 KEVCQLLPFLVR Unmodified 1500.8487 0.84865508 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 1 11 0.816 1 1 1 76.493 76.493 3 0.00026428 20391 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.24 62.716 79.402 48.944 102 71.045 84.191 155.37 74 46 102 65 83 148 1 1 1 1 1 2 30617 10776 3355 10369 25257;25258;25259 29245;29246;29247;29248 29248 4 KEWSGLLEELAR Unmodified 1429.7565 0.75652884 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 1 7.5 0.5 1 1 76.887 76.887 3 0.0009634 26557 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.168 37.73 98.311 47.816 135.55 85.274 73.733 86.374 92 46 130 83 74 83 2 1 2 2 1 2 10447 10777 2507 10370 25260;25261 29249;29250;29251 29251 3 KFAADAIK Unmodified 862.49125 0.49125301 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 1 9 0 1 49.787 49.787 3 0.039942 13080 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.785 14.702 239.5 257.85 285.14 244.23 0 326.2 226 262 289 239 0 306 1 1 1 1 0 1 21183 10778 246 10371 25262 29252 29252 1 KFAELQSPNK Unmodified 1160.619 0.61897272 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 1 9 0 1 49.925 49.925 3 0.0032185 13064 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.082 30.526 118.6 0 84.027 116.32 0 127.92 111 0 83 111 0 120 1 0 1 1 0 1 7884.3 10779 3038 10372 25263 29253 29253 1 KFAESQPK Unmodified 933.49198 0.4919813 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 1 9 1 1 1 39.624 39.624 3 0.026184 9104 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.076 39.471 239.28 153.45 230.44 327.76 207.25 326.68 225 163 233 316 220 312 2 2 1 2 1 2 15261 10780 3094 10373 25264;25265 29254;29255 29254 2 KFANSLSGVQQQLQAFSTYR Unmodified 2272.16 0.16002948 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 1 12 0 1 75.689 75.689 3 0.0002088 20063 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.857 43.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10781 893 10374 25266 29256 29256 1 KFANSLVGVQQQLQAFNTYR Unmodified 2311.2073 0.20731402 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 4.67 5.19 2 1 80.024 80.024 3;4 2.8442E-11 27150 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.38 97.09 9.4447 39.472 59.056 72.471 28.62 39.691 9 38 56 74 28 38 1 2 2 3 1 2 15370 10782 2148 10375 25267;25268;25269 29257;29258;29259;29260;29261 29257 5 KFDDFQK Unmodified 926.44978 0.44978213 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 8 0 1 51.281 51.281 3 0.024939 14466 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.827 30.121 955.9 864.21 1094.5 1069.4 1040.6 1193 901 890 1108 1056 1081 1147 1 1 1 1 1 1 73379 10783 551 10376 25270 29262 29262 1 KFDEVLVNHFCEEFGK Unmodified 1996.9353 0.93529784 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 7 0 1 74.472 74.472 4 0.0098395 25916 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.856 22.717 68.88 112.62 50.017 77.901 0 88.478 65 111 56 74 0 83 1 1 1 1 0 1 8708.6 10784 1957 10377 25271 29263 29263 1 KFDLGQDVIDFTGHALALYR Unmodified 2278.1746 0.17461691 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 1 10 1.63 1 2 1 1 1 90.067 90.067 3;4 8.1271E-11 29355 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.765 67.468 306.54 266.25 287.57 258.97 512.08 513.24 288 269 278 251 510 491 6 6 3 5 7 7 62586 10785 1595 10378 25272;25273;25274;25275;25276;25277 29264;29265;29266;29267;29268;29269;29270;29271;29272;29273;29274 29268 11 KFDLGQDVIDFTGHSLALYR Unmodified 2294.1695 0.16953153 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 8 0 1 84.325 84.325 4 1.2007E-10 30053 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.176 66.56 39.701 0 0 0 0 39.442 37 0 0 0 0 37 1 0 0 0 0 1 5584.2 10786 2132 10379 25278 29275 29275 1 KFDLNSPWEAFPAYR Unmodified 1839.8944 0.8944193 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 1 9.5 0.5 1 1 76.266 76.266 3 7.0402E-08 25549 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.1 87.963 275.75 351.29 277.78 323.35 291.26 269.4 260 352 287 316 299 259 3 4 3 4 3 2 62764 10787 3152 10380 25279;25280 29276;29277;29278;29279 29276 4 KFDQLLAEEK Unmodified 1219.6449 0.64485312 1974;2696;1149;391 Q8VDD5;A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q3UH59;Q61879;Q5SV64;Q6URW6;K3W4R2 Myh9;Myh11;Myh10;Myh14 Myosin-9;Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 1 8 0 1 62.532 62.532 3 0.0031459 19765 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.466 27.494 187.84 84.642 98.374 133.89 124.17 164.88 176 93 102 130 130 158 1 1 1 1 1 1 10314 10788 2696;391;1974;1149 10381 25281 29280 29280 1 KFDVNTSAVQVLIEHIGNLDR Unmodified 2367.2547 0.25465814 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 10 0.816 1 1 1 85.752 85.752 4 5.2036E-11 27485 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.228 67.36 108.1 306.33 142.63 48.017 342.47 200.87 102 297 139 47 334 195 2 4 2 2 3 2 287910 10789 2185 10382 25282;25283;25284 29281;29282;29283;29284;29285;29286;29287 29284 7 KFEEFQTDLAAHEER Unmodified 1848.8642 0.86424139 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7 3.54 1 1 1 1 56.175 56.175 4 1.7672E-05 18129 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.96 85.017 435.57 336.68 447.27 568.64 427.59 244.33 410 345 455 552 433 232 5 4 5 6 4 3 150570 10790 551 10383 25285;25286;25287;25288 29288;29289;29290;29291;29292;29293 29293 6 KFEHQLLYNACQLDNPDEQAAQIR Unmodified 2900.3875 0.38753958 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 1 7 0 1 65.891 65.891 4 4.5493E-16 21984 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.659 75.226 0 39.064 18.214 0 0 0 0 37 19 0 0 0 0 1 1 0 0 0 4690.1 10791 2301;365 10384 25289 29294 29294 1 KFFLSHPAYR Unmodified 1264.6717 0.671677 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 1 1 0 1 51.397 51.397 4 0.019853 15625 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.352 24.845 0 76.896 110.06 121.86 145.95 94.973 0 74 111 120 148 93 0 1 1 1 1 1 8339.2 10792 960;1082 10385 25290 29295 29295 1 KFFLSHPSYR Unmodified 1280.6666 0.66659162 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 4.67 5.19 2 1 50.022 50.022 3;4 0.00022847 15437 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.855 75.281 646.87 517.34 1006 953.71 1102.3 1147.8 606 498 994 942 1130 1103 3 4 4 5 5 4 88499 10793 118;1534 10386 25291;25292;25293 29296;29297;29298;29299;29300;29301 29297 6 KFFSTVR Unmodified 883.49159 0.49158736 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 1 1 0 1 48.765 48.765 3 0.011597 14654 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.83 50.079 259.54 164.65 242.26 188.56 248.31 223.17 244 175 242 190 253 216 1 1 1 1 1 1 20893 10794 2262 10387 25294 29302 29302 1 KFFVGGNWK Unmodified 1081.5709 0.57090032 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 0 0 1 3.75 4.76 3 1 67.896 67.896 3 0.00053679 27010 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.6 87.869 1239.9 1114.6 1440.1 1359.6 1530.6 1523.6 1168 1144 1449 1348 1573 1469 6 7 6 7 8 7 157940 10795 1405 10388 25295;25296;25297;25298 29303;29304;29305;29306;29307;29308;29309;29310 29308 8 KFGTVNIVHPK Unmodified 1238.7135 0.71354181 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 1 6 5 1 1 50.418 50.418 4 0.0010254 11417 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.695 49.441 0 369.17 37.048 27.73 35.413 58.685 0 368 37 28 37 56 0 2 1 1 1 1 53634 10796 2840 10389 25299;25300 29311;29312 29312 2 KFHSFGYAAR Unmodified 1182.5934 0.59342667 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 1 11.5 0.5 1 1 41.851 41.851 4 0.00029846 8303 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.679 54.958 0 764.85 1028.4 658.86 217.84 296.53 0 735 1020 648 218 284 0 2 2 1 1 1 66526 10797 2585 10390 25301;25302 29313;29314 29313 2 KFIGGSGQVSER Unmodified 1263.6571 0.65714914 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 1 10 0 1 41.633 41.633 3 0.020521 8429 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.097 21.615 0 48.195 44.805 46.59 54.109 67.746 0 46 46 46 56 65 0 1 1 1 1 1 4919.3 10798 2467 10391 25303 29315 29315 1 KFIWNSEK Unmodified 1050.5498 0.54983053 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 1 11 0 1 55.979 55.979 3 0.005488 13921 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.143 59.558 991.45 0 0 791.98 1011.7 0 924 0 0 742 1002 0 1 0 0 1 1 0 122340 10799 1369 10392 25304 29316 29316 1 KFIWTNHK Unmodified 1072.5818 0.58179936 219 Q7TMF3;A0A0R4J275 Ndufa12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 0 0 0 1 4.67 5.19 2 1 50.99 50.99 3;4 0.0031391 9941 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.684 62.372 841.12 51.044 877.67 913.65 876.39 872.56 789 56 854 902 905 842 2 1 2 3 2 2 51936 10800 219 10393 25305;25306;25307 29317;29318;29319 29319 3 KFLDGIYVSEK Unmodified 1297.6918 0.69180331 242 A0A140T8T4;P51410;A0A0G2JES3 Rpl9 60S ribosomal protein L9 yes no 0 0 0 1 9 0 1 65.222 65.222 3 0.054168 20344 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.813 18.154 0 0 77.22 63.94 133.04 0 0 0 74 65 130 0 0 0 1 1 1 0 10826 10801 242 10394 25308 29320 29320 1 KFLPLFDR Unmodified 1034.5913 0.59130141 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 12 0.816 1 1 1 67.149 67.149 3 0.0048909 18850 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.815 73.431 1056.1 548.13 748.26 651.14 1174.8 1013.4 991 571 752 649 1185 970 3 2 2 2 3 2 311890 10802 2175 10395 25309;25310;25311 29321;29322;29323;29324 29322 4 KFLQPGSQR Unmodified 1059.5825 0.58252764 1445 P24472;P30115 Gsta4;Gsta3 Glutathione S-transferase A4;Glutathione S-transferase A3 no no 0 0 0 1 11 0 1 41.029 41.029 3 0.0010203 8047 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.957 70.733 257 0 267.04 0 0 0 241 0 248 0 0 0 1 0 1 0 0 0 33537 10803 1445 10396 25312 29325 29325 1 KFLTLGSK Unmodified 892.5382 0.53820321 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 1 0 1 59.263 59.263 3 0.013481 19292 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.424 47.423 0 280.67 268.21 353.41 408.96 472.29 0 268 278 345 422 454 0 1 1 1 1 1 36651 10804 369;3345 10397 25313 29326 29326 1 KFLVFVANFDENDPK Unmodified 1781.8988 0.89883598 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 1 11 0.816 1 1 1 82.986 82.986 4 0.021844 25625 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.028 20.747 0 19.729 29.112 39.57 46.298 46.594 0 19 28 37 46 46 0 1 1 1 1 2 12513 10805 1595 10398 25314;25315;25316 29327;29328;29329 29328 3 KFLVFVANFDENDPK Deamidation (N) 1782.8829 0.88285156 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 1 0 1 13 0 1 80.98 80.98 4 0.033399 31329 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.025 29.237 60.088 0 0 81.975 0 49.036 56 0 0 75 0 46 1 0 0 1 0 1 2968.7 10806 1595 10398 25317 29330 29330 606 1 KFMNPFNLPNLYQK Unmodified 1752.9021 0.90214722 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 1 1 0 1 84 84 4 0.019861 29534 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.066 28.148 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 1118.2 10807 2092 10399 25318 29331 29331 1 KFNALFAQGNYSEAAK Deamidation (N) 1758.8577 0.85769944 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 1 8.33 0.471 2 1 65.02 65.02 3;4 8.4926E-05 20845 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.032 72.204 157.84 119.29 185.64 237.43 212 105.06 148 120 185 231 213 102 2 2 2 3 2 1 18407 10808 2185 10400 25319;25320;25321 29332;29333;29334 29334 861 3 KFNALFAQGNYSEAAK Unmodified 1757.8737 0.87368386 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 10.6 1.4 2 2 1 1 1 63.393 63.393 3;4 1.37E-05 22284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.175 53.811 523.9 625.94 1078.5 619.42 497.38 813.52 494 628 1063 600 500 771 4 4 5 4 4 4 493820 10809 2185 10400 25322;25323;25324;25325;25326;25327;25328 29335;29336;29337;29338;29339;29340;29341;29342 29342 8 KFNILGTNTK Unmodified 1134.6397 0.63970816 630 B7ZC18;P42227 Stat3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 yes no 0 0 0 1 12 0 1 57.174 57.174 3 0.0011115 13009 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.026 49.682 61.747 34.323 52.712 50.816 94.932 61.251 58 37 53 51 95 60 1 1 1 1 1 1 6970.4 10810 630 10401 25329 29343 29343 1 KFPFSEFVPK Unmodified 1224.6543 0.6542956 555 A6H5Z3 Exoc6b Exocyst complex component 6B yes yes 0 0 0 1 11 0 1 72.18 72.18 3 0.0037181 21131 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.488 43.519 109.24 41.578 0 69.472 83.627 0 102 46 0 65 83 0 1 1 0 1 1 0 5517 10811 555 10402 25330 29344 29344 1 KFQSEQAAGSVSK Unmodified 1365.6888 0.6888432 2917 Q9CQ92;G3X9U9 Fis1 Mitochondrial fission 1 protein yes no 0 0 0 1 9.33 2.62 1 1 1 42.582 42.582 3 0.00028101 10503 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.471 59.406 60.088 69.16 0 50.278 93.636 165.76 56 65 0 46 93 158 1 1 0 1 1 2 17265 10812 2917 10403 25331;25332;25333 29345;29346;29347 29346 3 KFSGDVVLAAR Unmodified 1161.6506 0.6506072 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 1 9 0 1 52.529 52.529 3 0.0016463 14386 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.846 48.614 148.41 134.71 190.26 0 0 236.65 140 139 184 0 0 222 1 1 1 0 0 1 31474 10813 1582 10404 25334 29348 29348 1 KFTDFEEVR Unmodified 1169.5717 0.57168818 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 6 0 1 54.507 54.507 3 0.011568 17499 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.633 32.574 240.57 161.52 187.59 183.37 0 171.63 226 170 191 178 0 161 1 1 1 1 0 1 16283 10814 118;1534 10405 25335 29349 29349 1 KFTFGLDWVPK Unmodified 1336.718 0.71795849 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 11 0 1 78.835 78.835 3 0.027968 24029 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.632 26.753 0 209.61 0 0 0 271.83 0 197 0 0 0 255 0 1 0 0 0 1 22197 10815 1641 10406 25336 29350 29350 1 KFTPNPSAIFQTSAPQTLNV Unmodified 2160.1215 0.1215187 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 1 10.3 0.471 2 1 79.904 79.904 3;4 0.00015899 25021 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.942 37.172 69.317 75.303 140.02 123.61 101.16 47.522 65 75 139 120 102 46 2 2 3 2 2 1 30035 10816 1901 10407 25337;25338;25339 29351;29352;29353 29351 3 KFVADGIFK Unmodified 1023.5753 0.57531699 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 1 12 1 1 1 62.09 62.09 3 0.006468 22067 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.006 44.385 98.533 224.31 377.73 0 179.33 347.73 93 223 362 0 178 331 1 2 2 0 1 2 19990 10817 1755 10408 25340;25341 29354;29355 29355 2 KFVEVMSEYNATQSDYR Unmodified 2065.9415 0.94150543 1197 O35526;D6RFB9;A0A0J9YUA0 Stx1a Syntaxin-1A yes no 0 0 0 1 8.33 0.471 2 1 66.252 66.252 3;4 3.7729E-06 21659 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.583 56.948 69.467 35.469 102.19 196.11 0 118.33 65 38 102 185 0 111 2 2 2 3 0 2 17469 10818 1197 10409 25342;25343;25344 29356;29357;29358 29356 3 KFVEVMTEYNATQSK Unmodified 1773.8607 0.86073591 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 1 9.83 1.77 2 1 1 1 1 65.861 65.861 3;4 8.855E-12 18441 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.25 95.955 335.94 161.83 207.48 367.54 198.83 169.81 315 171 209 351 204 163 5 4 3 5 3 2 57692 10819 1696 10410 25345;25346;25347;25348;25349;25350 29359;29360;29361;29362;29363;29364 29362 6 KFVGAANYR Unmodified 1024.5454 0.54541385 290 A0A1L1SQE2;E9QP54;Q8K3E5 Ahi1 Jouberin yes no 0 0 0 1 11 0 1 41.938 41.938 3 0.009362 8382 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.504 44.976 59.513 114.09 0 101.65 0 0 56 111 0 93 0 0 1 1 0 1 0 0 9397.6 10820 290 10411 25351 29365 29365 1 KFYGPEGPYGVFAGR Unmodified 1643.8096 0.80962704 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 1 10.5 0.5 1 1 63.69 63.69 3 6.1394E-05 17102 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.428 66.396 117.4 157.65 152.3 193.13 0 295.87 111 158 158 185 0 283 1 1 1 1 0 2 52847 10821 1228 10412 25352;25353 29366;29367 29367 2 KGAAALGIGTDSVILIK Unmodified 1625.9716 0.97160699 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 1 10.3 0.471 2 1 71.97 71.97 3;4 1.3531E-06 20790 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.393 53.281 29.523 105.59 56.606 83.067 0 78.884 28 102 56 83 0 74 1 2 1 2 0 2 18049 10822 1579 10413 25354;25355;25356 29368;29369;29370 29370 3 KGAAIEALNDGELQK Unmodified 1555.8206 0.82058566 2856 Q99L47;F8WJK8;E9Q1V0 St13 Hsc70-interacting protein yes no 0 0 0 1 8 0 1 59.3 59.3 4 0.00087739 18339 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.599 26.91 39.468 46.283 0 0 0 49.036 37 46 0 0 0 46 1 1 0 0 0 1 2855.8 10823 2856 10414 25357 29371 29371 1 KGADEAALAR Unmodified 1000.5302 0.53015772 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 5.5 0.5 1 1 36.456 36.456 3 0.0019072 8883 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.245 41.767 1212 812.12 1013.2 799.5 190.53 1098.9 1139 856 1020 790 201 1036 2 2 2 2 1 2 79112 10824 1329 10415 25358;25359 29372;29373 29373 2 KGADIMYTGTLDCWR Unmodified 1785.8178 0.81782524 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 1 8 0.707 1 2 1 65.258 65.258 3;4 4.1509E-05 20198 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.609 56.568 347.12 230.51 149.78 214.05 306.84 220.51 325 241 149 203 306 213 3 4 2 2 3 2 43677 10825 1585 10416 25360;25361;25362;25363 29374;29375;29376;29377 29377 4 KGASLLLYHR Unmodified 1156.6717 0.671677 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 no no 0 0 0 1 12 0 1 46.529 46.529 4 0.012912 8962 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.108 30.117 59.76 65.13 0 0 65.345 77.019 56 65 0 0 65 74 1 1 0 0 1 1 4470.7 10826 965 10417 25364 29378 29378 1 KGCVITISGR Unmodified 1089.5965 0.59646314 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 11 1 1 1 43.797 43.797 3 0.0031103 9206 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.655 48.711 294.84 193.05 55.692 56.344 314.94 287.36 276 201 56 56 313 278 2 2 1 1 2 2 81187 10827 852 10418 25365;25366 29379;29380 29379 2 KGDAPAAEAEAK Unmodified 1156.5724 0.57241646 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 1 6.25 2.73 2 2 2 1 1 38.746 38.746 3;4 1.5582E-13 10763 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.24 85.866 766.31 897.84 674.92 515.99 1287.5 831.45 720 903 675 519 1265 800 8 9 5 4 5 7 117000 10828 1318 10419 25367;25368;25369;25370;25371;25372;25373;25374 29381;29382;29383;29384;29385;29386;29387;29388;29389 29383 9 KGDEVQCEIEELGVIINK Unmodified 2072.046 0.0459705 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 1 5 0 1 84.386 84.386 4 1.0177E-07 32030 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.144 57.461 0 0 19.268 28.949 26.96 29.079 0 0 19 28 28 28 0 0 1 1 1 1 1693.1 10829 165 10420 25375 29390 29390 1 KGDIFLVR Unmodified 946.56 0.56000128 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 9 0 1 55.237 55.237 3 0.035562 15559 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.153 34.209 0 360.71 381.12 358.54 417.62 0 0 345 387 356 415 0 0 1 1 1 1 0 42917 10830 1875 10421 25376 29391 29391 1 KGDILTLLNSTNK Deamidation (N) 1416.7824 0.78240924 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 1 9 0 1 69.13 69.13 3 0.0051675 22243 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.703 62.492 138.81 0 114.38 112.84 88.447 106.21 130 0 111 111 93 102 1 0 1 1 1 1 7399.4 10831 551 10422 25377 29392 29392 150 1 KGDILTLLNSTNK Unmodified 1415.7984 0.79839365 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 11.4 0.904 1 3 2 1 70.634 70.634 2;3;4 5.6208E-05 21013 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.97 87.409 593.99 484.15 784.62 549.12 672.56 901.83 560 505 768 546 691 864 6 7 6 6 7 8 237230 10832 551 10422 25378;25379;25380;25381;25382;25383;25384 29393;29394;29395;29396;29397;29398;29399;29400;29401 29393 9 KGDLQWNAGEK Unmodified 1244.6149 0.61494998 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 1 10 2.16 1 1 1 50.124 50.124 3 0.0001222 15969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.753 41.965 475.16 294.55 321.9 335.47 262.52 282.46 446 312 320 329 271 272 2 2 1 2 1 1 32810 10833 2129 10423 25385;25386;25387 29402;29403;29404 29404 3 KGDSSAEELK Unmodified 1062.5193 0.51931826 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 1 5 0 1 40.805 40.805 3 0.0042329 11533 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.01 34.478 69.323 83.638 0 60.386 43.701 47.789 65 83 0 56 46 46 1 1 0 1 1 1 3285.4 10834 1574 10424 25388 29405 29405 1 KGDVVIVLTGWR Unmodified 1341.7769 0.77687035 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 12 1 1 1 70.223 70.223 3 5.3479E-05 20297 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.494 79.336 187.02 221.22 206.15 251.13 0 59.696 176 223 214 241 0 56 1 2 2 2 0 1 40928 10835 1609 10425 25389;25390 29406;29407 29406 2 KGEDFVK Unmodified 821.42832 0.42831841 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 1 7 0 1 44.735 44.735 3 0.041987 12201 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.735 18.694 1046.9 834.82 1148.7 830.73 1064.5 1120.9 986 869 1147 841 1091 1080 1 1 1 1 1 1 158670 10836 1327 10426 25391 29408 29408 1 KGEGDAAPSEEK Unmodified 1216.5572 0.55716033 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 1 4.67 0.943 2 1 35.673 35.673 3;4 0.00036074 8308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.102 50.093 69.27 180.73 111.35 138.8 345.27 207.61 65 176 111 139 343 204 1 2 1 2 2 2 43796 10837 1318 10427 25392;25393;25394 29409;29410;29411 29411 3 KGEIFELK Unmodified 962.54368 0.54368251 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0;H3BJ06;Q5SWR0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 1 9.33 2.62 1 1 1 59.479 59.479 3 0.017291 18654 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.17 4.0994 1077.6 777.13 1910.1 985.31 1587.6 1765.8 1013 793 1854 986 1619 1699 4 3 5 4 5 5 155390 10838 1203;3123 10428 25395;25396;25397 29412;29413;29414;29415;29416 29415 5 KGESGQSWPR Unmodified 1130.5469 0.54687041 3304 Q9R0Q7;D3Z7C6 Ptges3 Prostaglandin E synthase 3 yes no 0 0 0 1 10 3 1 1 36.009 36.009 3 0.005567 8268 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.179 33.757 325.42 307.25 229.86 313.98 360.64 439.56 306 313 232 306 373 422 2 2 1 2 2 2 34070 10839 3304 10429 25398;25399 29417;29418 29417 2 KGESVMVVPTLSEEEAK Unmodified 1831.9237 0.9237301 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 1 6 0.707 1 2 1 62.276 62.276 3;4 7.0118E-07 21057 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.07 61.932 49.684 182.3 96.429 77.8 159.16 116.26 47 176 92 75 157 111 2 4 2 2 2 2 27877 10840 2194 10430 25400;25401;25402;25403 29419;29420;29421;29422 29420 4 KGFIGPGIDVPAPDMSTGER Unmodified 2043.0095 0.0095254139 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 8 0 1 66.387 66.387 3 2.0271E-06 21613 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.225 59.937 0 48.006 56.098 36.224 46.452 0 0 46 56 37 46 0 0 1 1 1 1 0 11989 10841 1458 10431 25404 29423 29423 1 KGFNEGLWEIDNNPK Unmodified 1759.8529 0.85294842 541 Q99JF8;A2BI12;F6RB63 Psip1 PC4 and SFRS1-interacting protein yes no 0 0 0 1 7 0 1 65.997 65.997 4 0.024772 22027 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.092 10.944 0 29.017 46.353 37.678 0 0 0 28 46 37 0 0 0 1 1 1 0 0 2921.9 10842 541 10432 25405 29424 29424 1 KGFTPLHVAAK Unmodified 1167.6764 0.67642802 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;G5E8J2;D3Z5M4;D3YTV8;G8JL84;E9QNT8;B7ZW98;A0A0R4J1N7;G3UY11;Q02357;Q0VGY9;F7D1P5;S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank3;Ank1;Ank2 Ankyrin-3;Ankyrin-1;Ankyrin-2 no no 0 0 0 1 11 1 1 1 48.324 48.324 4 0.00060467 9458 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.34 45.826 986.18 646.17 1060.4 935.46 250.82 1230.5 928 664 1059 918 262 1161 2 1 2 2 1 2 48737 10843 3450;3449;3451;3452 10433 25406;25407 29425;29426 29426 2 KGGDLPSNK Unmodified 914.48214 0.48214489 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 1 13 0 1 36.897 36.897 3 0.019654 9958 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.37 29.673 0 127.68 0 169.42 173.95 160.27 0 120 0 158 179 155 0 1 0 1 1 1 12602 10844 20;2354 10434 25408 29427 29427 1 KGGFTLTGQPIFR Unmodified 1420.7827 0.78268401 2187 Q68FL0 Slc8a1 yes yes 0 0 0 1 11 0 1 61.688 61.688 3 0.0039597 16358 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.32 37.939 0 0 80.068 0 0 118.33 0 0 74 0 0 111 0 0 1 0 0 1 9722.6 10845 2187 10435 25409 29428 29428 1 KGIGPVYSSK Unmodified 1034.576 0.57604528 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 1 10 0 1 45.971 45.971 3 0.0011335 10125 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.838 60.9 0 127.68 0 0 197.02 202.25 0 120 0 0 195 195 0 1 0 0 1 1 13146 10846 1558 10436 25410 29429 29429 1 KGIVDQSQQAYQEAFEISK Unmodified 2168.075 0.074962442 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 1 8.33 2.21 1 1 3 1 68.566 68.566 3;4;5 5.4705E-14 22608 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.46 95.008 474.92 179.77 199.28 485.64 483.54 318.8 444 176 195 463 491 306 5 4 2 6 6 3 76265 10847 1773 10437 25411;25412;25413;25414;25415;25416 29430;29431;29432;29433;29434;29435;29436;29437 29433 8 KGLAALK Unmodified 699.46431 0.46430998 2183 Q64737 Gart Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase yes yes 0 0 0 1 11.5 0.5 1 1 47.949 47.949 3 0.024495 10672 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.058 9.3003 177.43 144.73 173.98 603.88 233.15 691.58 167 150 177 566 237 655 1 1 1 2 1 2 32794 10848 2183 10438 25417;25418 29438;29439 29438 2 KGLEQIPGFQCLAK Unmodified 1587.8443 0.84429799 1281 O88851 Rbbp9 Putative hydrolase RBBP9 yes yes 0 0 0 1 9.67 0.471 1 2 68.349 68.349 3;4 0.001053 19720 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.115 30.032 128.76 67.962 121.42 216.68 163.94 153.09 120 65 120 204 167 148 1 1 2 2 2 2 17485 10849 1281 10439 25419;25420;25421 29440;29441;29442 29442 3 KGLFPFTHVK Unmodified 1172.6706 0.67061436 1571 P47941 Crkl Crk-like protein yes yes 0 0 0 1 12 0 1 59.993 59.993 4 0.0057108 14171 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.783 34.91 0 53.016 74.663 49.927 72.656 71.481 0 51 74 51 74 69 0 1 1 1 1 1 3442.4 10850 1571 10440 25422 29443 29443 1 KGLIAAICAGPTALLAHEVGFGCK Unmodified 2453.2923 0.29230598 2868 Q99LX0;A2A813;A2A815 Park7 Protein deglycase DJ-1 yes no 0 0 0 1 11.8 0.433 1 3 89.91 89.91 4 1.013E-15 25506 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.248 77.256 140.99 59.39 22.089 180.41 61.779 127.76 133 59 23 167 62 121 7 3 1 6 4 4 16815 10851 2868 10441 25423;25424;25425;25426 29444;29445;29446;29447;29448;29449;29450;29451;29452;29453 29450 10 KGLTPSQIGVILR Unmodified 1380.8453 0.84528426 1718 P62301;Q921R2 Rps13 40S ribosomal protein S13 yes no 0 0 0 1 12 0 1 62.126 62.126 3 0.00028756 14909 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.911 65.681 0 69.16 0 80.882 0 0 0 65 0 74 0 0 0 1 0 1 0 0 9424.9 10852 1718 10442 25427 29454 29454 1 KGMNTLVGYDLVPEPK Unmodified 1759.9179 0.91785686 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 1 9 0 1 68.415 68.415 3 0.0054505 21936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.547 34.816 49.176 36.052 0 0 0 49.036 46 37 0 0 0 46 1 1 0 0 0 1 2725.8 10853 1360 10443 25428 29455 29455 1 KGNYSER Unmodified 852.40898 0.40897995 645 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3 yes no 0 0 0 1 7 1 1 1 26.591 26.591 3 0.017746 4697 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.426 44.265 192 316.63 397.55 100.27 272.8 377.04 181 316 390 102 268 361 1 2 2 1 1 2 25903 10854 645 10444 25429;25430 29456;29457 29456 2 KGPAAIQK Unmodified 811.49159 0.49158736 661 CON__P35527 yes yes 0 0 0 1 10 0 1 39.129 39.129 3 0.030962 7428 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.589 29.931 172.51 119.37 119.28 56.712 93.53 155.1 162 125 120 60 97 148 1 1 1 1 1 1 8354.4 + 10855 661 10445 25431 29458 29458 1 KGPAPLNLEVPAYEFTSDDVVVVG Unmodified 2515.2846 0.28462087 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 1 7.25 3.34 2 1 1 87.758 87.758 3 0.0026091 33117 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.615 33.623 0 0 30.296 19 19.197 19.706 0 0 28 19 19 19 0 0 1 1 1 1 14937 10856 2958 10446 25432;25433;25434;25435 29459;29460;29461;29462 29461 4 KGPEFQEFLLTK Unmodified 1435.7711 0.77111627 488;489 A2ALS5;A2ALS4;A2ALS7 Rap1gap Rap1 GTPase-activating protein 1 no no 0 0 0 1 9 0 1 69.409 69.409 3 0.027623 22394 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.227 28.602 118.03 89.248 104.41 0 131.35 134.83 111 93 102 0 130 130 1 1 1 0 1 1 6487.3 10857 488;489 10447 25436 29463 29463 1 KGPGAASALDDSR Unmodified 1243.6157 0.61567826 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 1 6 0 1 38.033 38.033 3 0.00022855 9736 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.285 54.91 89.059 0 0 121.32 0 127.92 83 0 0 111 0 120 1 0 0 1 0 1 8369.9 10858 1400 10448 25437 29464 29464 1 KGPGPGGGVGGSK Unmodified 1053.5567 0.55670682 1912 Q3TBU7;Q3U2K8;Q80WC7 Agfg2 Arf-GAP domain and FG repeat-containing protein 2 yes no 0 0 0 1 9 0 1 35.579 35.579 3 0.0023856 6964 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.357 46.539 0 0 0 54.932 43.109 72.324 0 0 0 51 46 69 0 0 0 1 1 1 4953.5 10859 1912 10449 25438 29465 29465 1 KGPGPGGPGGAGGAR Unmodified 1191.6109 0.61086765 1674 P60761 Nrgn Neurogranin;NEUG(55-78) yes yes 0 0 0 1 9.88 1.9 1 1 2 1 1 1 1 29.391 29.391 3;4 1.0499E-32 4828 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 169.58 129.71 2648.2 1964.9 2407.9 2706.4 2129 2782.9 2485 1985 2404 2639 2211 2647 10 10 8 12 10 11 682610 10860 1674 10450 25439;25440;25441;25442;25443;25444;25445;25446 29466;29467;29468;29469;29470;29471;29472;29473;29474;29475;29476;29477;29478;29479;29480 29468 15 KGPLVFGEPIAASLGTDGTHYWSK Unmodified 2530.2856 0.28562392 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 9 0 1 76.185 76.185 4 2.8424E-05 25642 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.827 43.024 60.088 0 0 30.604 0 0 56 0 0 28 0 0 1 0 0 1 0 0 5648.4 10861 1850;2212 10451 25447 29481 29481 1 KGPPVPPLPK Unmodified 1028.6383 0.6382516 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 1 11.2 1.79 1 1 2 52.821 52.821 3;4 0.0019898 17501 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.347 43.149 839.47 994.43 956.64 1108 1441.7 1158.6 788 993 948 1080 1465 1114 3 3 3 4 5 4 197410 10862 90 10452 25448;25449;25450;25451 29482;29483;29484;29485;29486 29486 5 KGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSR Unmodified 3841.9738 0.97379842 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 9.71 2.43 2 1 1 1 2 80.993 80.993 4;5 1.5941E-06 29286 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.782 37.726 147.55 140.38 233.27 155.24 247.31 225.88 140 140 223 149 250 217 6 5 6 4 7 6 77670 10863 1642 10453 25452;25453;25454;25455;25456;25457;25458 29487;29488;29489;29490;29491;29492;29493;29494;29495;29496 29487 10 KGSLNINEFK Unmodified 1148.619 0.61897272 39 A0A0A0MQ90;P97352 S100a13 Protein S100-A13 yes no 0 0 0 1 9 0 1 56.336 56.336 3 0.050681 16153 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.189 6.5998 157.7 219.19 0 151.93 0 157.77 148 216 0 139 0 148 1 1 0 1 0 1 14214 10864 39 10454 25459 29497 29497 1 KGSQECFQFILPALPHAIDLLR Unmodified 2552.3573 0.35734907 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 1 10 0 1 86.953 86.953 4 9.6512E-06 27951 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.169 36.664 59.557 75.359 25.412 79.954 26.952 9.594 56 75 28 75 28 9 2 2 1 2 1 1 3269.1 10865 416 10455 25460 29498;29499 29498 2 KGSVVNVNPTNTR Unmodified 1384.7423 0.74227576 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;F8VPL5;E9PVG7;A0A0A6YW53;A0A0A6YWM8;A0A0A6YWR8;B2RUE8;B7ZNR9;P97820 Mink1;Map4k4 Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4 yes no 0 0 0 1 10 0 1 40.25 40.25 3 0.0038269 7869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.626 37.069 34.193 0 24.096 13.866 0 0 32 0 23 14 0 0 1 0 1 1 0 0 2364 10866 1081 10456 25461 29500 29500 1 KGTDELYAVK Unmodified 1122.5921 0.59208927 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 1 13 0 1 49.746 49.746 3 0.017273 16183 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.02 16.44 208.46 173.65 164.24 209.02 221.6 212.21 196 179 171 204 228 205 1 1 1 1 1 1 19142 10867 1796 10457 25462 29501 29501 1 KGTVVAEK Unmodified 830.48617 0.48616764 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57 Coro1a Coronin-1A;Coronin yes no 0 0 0 1 10.5 2.5 1 1 38.522 38.522 3 0.015562 10416 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.006 27.395 191.22 386.64 413.73 517.11 367.93 473.47 180 382 426 502 390 454 1 2 2 2 2 2 59016 10868 1289 10458 25463;25464 29502;29503 29503 2 KGTVVYGEPITASLGTDGSHYWSK Unmodified 2552.2547 0.25471772 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 1 8.33 0.943 1 2 66 66 4;5 4.7148E-18 20479 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.63 93.832 159.08 142.36 185.6 208.97 156.11 251.39 149 139 186 204 158 240 2 2 2 2 1 3 23271 10869 1158 10459 25465;25466;25467 29504;29505;29506 29505 3 KGTVYLTPYR Unmodified 1196.6554 0.65535823 1856 P97765 Wbp2 WW domain-binding protein 2 yes yes 0 0 0 1 11.5 0.5 1 1 48.366 48.366 3 0.001642 10804 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.505 65.565 0 0 101.05 461.66 133.23 84.676 0 0 97 462 134 83 0 0 1 2 1 1 79500 10870 1856 10460 25468;25469 29507;29508 29507 2 KGVAINFVK Unmodified 974.5913 0.59130141 135 A0A0N4SVP8;Q91VC3;E9PV04 Eif4a3;Gm8994 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 1 6.5 5.5 1 1 56.955 56.955 3 0.0062247 12690 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.607 49.536 117.78 80.61 154.06 135.94 129.16 169.01 111 83 153 135 135 162 2 1 2 2 2 2 9453.7 10871 135 10461 25470;25471 29509;29510 29510 2 KGVEGLIDIENPNR Unmodified 1552.8209 0.82092001 1987 Q3UHX2 Pdap1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 1 6.5 0.5 1 1 61.249 61.249 3 0.0014206 19807 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.528 45.146 0 68.439 91.279 93.359 151.5 123.6 0 65 92 93 153 120 0 1 2 2 2 2 9294.1 10872 1987 10462 25472;25473 29511;29512 29512 2 KGVITVK Unmodified 743.49052 0.49052473 1766 P63038;D3Z2F2 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 1 11 0.816 1 1 1 44.941 44.941 3 0.013915 8383 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.162 30.698 2321.7 1983.7 2515.4 1709.3 2323.1 2072 2187 2051 2516 1741 2364 1995 2 2 2 2 2 1 348930 10873 1766 10463 25474;25475;25476 29513;29514;29515 29515 3 KGVLFGVPGAFTPGCSK Unmodified 1720.8971 0.89706184 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 1 6.67 5.68 3 2 1 72.17 72.17 3;4 8.5389E-06 24340 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.502 80.22 382.98 451.14 528.11 402.06 402.3 291.73 360 445 524 385 402 279 6 6 6 6 4 4 212240 10874 1867 10464 25477;25478;25479;25480;25481;25482 29516;29517;29518;29519;29520;29521;29522;29523;29524 29517 9 KGVNLPGAAVDLPAVSEK Unmodified 1763.9781 0.97814893 1609 P52480;A0A1L1SU37 Pkm Pyruvate kinase PKM yes no 0 0 0 1 9 1.91 1 2 2 1 65.485 65.485 3;4;5 7.7206E-10 23507 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.55 97.06 594.13 357.56 446.51 728.59 758.87 838.61 556 360 445 704 779 807 5 4 4 8 6 7 251860 10875 1609 10465 25483;25484;25485;25486;25487;25488 29525;29526;29527;29528;29529;29530;29531;29532 29532 8 KGVVPGGGLK Unmodified 910.56 0.56000128 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 1 10 0 1 46.636 46.636 3 0.039876 10362 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.3 30.861 167.74 133.42 189.26 167.71 188.24 172.65 158 139 190 167 193 167 1 1 1 1 1 1 10091 10876 1972 10466 25489 29533 29533 1 KGWLTINNIGIMK Unmodified 1486.833 0.83300502 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 7.33 5.68 4 3 2 77.661 77.661 3;4 0.00014905 19447 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.651 65.212 535.22 36.052 252.7 653.62 400.2 736.83 500 37 241 615 417 705 6 1 4 9 5 8 71205 10877 118;1534 10467 25490;25491;25492;25493;25494;25495;25496;25497;25498 29534;29535;29536;29537;29538;29539;29540;29541;29542;29543;29544;29545;29546 29541 13 KGWLTINNIGIMK Deamidation (N) 1487.817 0.8170206 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 0 1 10.3 0.471 2 1 76.929 76.929 3;4 0.00023903 23724 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.045 42.547 0 68.109 210.86 75.954 62.844 117.6 0 65 213 74 65 112 0 2 3 2 1 2 27784 10878 118;1534 10467 25499;25500;25501 29547;29548;29549 29548 53 3 KGWLTINNIGIMK Oxidation (M) 1502.8279 0.82791964 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 1 1 12 0 1 69.04 69.04 3 0.00067656 17436 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.766 66.436 64.38 0 0 0 0 49.036 60 0 0 0 0 46 1 0 0 0 0 1 8789.1 10879 118;1534 10467 25502 29550 29550 13 1 KGYICIFDIR Unmodified 1283.6696 0.66962808 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 10 0 1 68.146 68.146 3 0.021982 19630 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.567 27.555 69.468 54.9 0 84.866 78.736 0 65 56 0 79 79 0 1 1 0 1 1 0 13223 10880 570 10468 25503 29551 29551 1 KGYNVNDEK Unmodified 1065.5091 0.50908792 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 7 1 1 1 38.444 38.444 3 0.010963 8341 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.694 43.907 207.45 0 299.75 0 158.98 321.66 195 0 278 0 158 306 2 0 2 0 1 2 19457 10881 2769 10469 25504;25505 29552;29553 29553 2 KHEAFESDLAAHQDR Unmodified 1752.818 0.81795989 418;310;3209 A1BN54;Q7TPR4;A0A1L1SV25;P57780;Q9JI91 Actn1;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 1 6 0 1 40.446 40.446 5 0.050305 10895 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 29.341 19.76 59.578 34.405 56.576 37.069 0 49.036 56 37 56 37 0 46 1 1 1 1 0 1 2028 10882 418;310;3209 10470 25506 29554 29554 1 KHEAFETDFTVHK Unmodified 1587.7682 0.76815616 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 8.67 3.09 1 1 1 50.247 50.247 5 7.3128E-05 14556 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.944 73.526 418.24 619.82 633.83 537.2 549.64 668.23 395 619 642 529 565 640 4 5 4 3 4 3 44510 10883 551 10471 25507;25508;25509 29555;29556;29557;29558;29559 29559 5 KHEAIETDIAAYEER Unmodified 1773.8533 0.85334235 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 5.83 3.34 1 2 1 1 1 53.191 53.191 3;4 2.4975E-05 18430 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.12 58.484 642.4 553.32 627.77 730.98 740.41 740.9 604 570 631 712 756 711 7 9 7 9 8 7 60938 10884 2148 10472 25510;25511;25512;25513;25514;25515 29560;29561;29562;29563;29564;29565;29566;29567;29568;29569 29562 10 KHEAIETDIVAYSGR Unmodified 1687.8529 0.85294842 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 5.5 0.5 1 1 52.225 52.225 4 4.9221E-05 17238 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.508 56.211 77.954 130.85 132.42 0 112.48 105.52 74 130 130 0 111 102 2 2 2 0 2 2 10269 10885 2186 10473 25516;25517 29570;29571 29570 2 KHEALMSDLSAYGSSIQALR Unmodified 2176.0947 0.094652027 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9 0 1 67.15 67.15 4 2.6868E-06 21345 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.602 37.949 108.34 89.808 110.01 142.42 156.74 57.877 102 93 111 139 158 56 1 1 1 2 2 1 9625.7 10886 551 10474 25518 29572;29573 29572 2 KHEDFDK Unmodified 917.4243 0.42429566 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 36.992 36.992 4 0.022192 8448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.679 21.576 590.58 572.78 953.2 768.26 1063 1097.1 556 584 930 762 1086 1054 4 4 4 4 5 4 81661 10887 551 10475 25519;25520;25521;25522 29574;29575;29576;29577;29578 29578 5 KHEDFEK Unmodified 931.43995 0.43994572 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.75 3.11 1 1 1 1 37.354 37.354 4 0.0069139 9623 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.239 21.563 1410.8 1189.9 1542.9 1250.7 1311.8 1732.1 1329 1232 1550 1251 1356 1660 5 5 5 5 4 5 96275 10888 551 10476 25523;25524;25525;25526 29579;29580;29581;29582;29583 29580 5 KHFGAGGNQR Unmodified 1070.537 0.53697443 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 1 9.67 0.943 2 1 28.047 28.047 3;4 0.00031773 4115 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.08 70.465 0 119.44 120.35 145.74 63.568 118.33 0 114 120 141 63 111 0 2 2 3 2 1 7154.4 10889 3174 10477 25527;25528;25529 29584;29585;29586 29586 3 KHFVCQK Unmodified 945.48546 0.48545613 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 1 10 0 1 37.532 37.532 4 0.02622 6807 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.205 36.376 138.1 116.1 135.89 153.66 0 157.77 130 120 139 148 0 148 1 1 1 1 0 1 3350.1 10890 2334 10478 25530 29587 29587 1 KHGCAFLVDEVQTGGGCTGK Unmodified 2119.9779 0.97790771 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 1 7 0 1 55.774 55.774 4 2.8698E-13 17213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.96 87.628 129.43 80.649 0 68.565 131.86 28.243 121 84 0 65 130 28 2 2 0 2 2 1 5140.2 10891 1702 10479 25531 29588;29589 29589 2 KHGGPADEER Unmodified 1094.5105 0.51048491 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 1 8.2 3.97 1 1 1 2 27.05 27.05 3;4 0.0013002 5454 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.066 51.279 691.69 517.18 349.46 493.45 978.9 634.12 649 527 343 474 977 616 9 6 4 7 8 6 39750 10892 1326 10480 25532;25533;25534;25535;25536 29590;29591;29592;29593;29594;29595;29596;29597;29598 29592 9 KHGVYNPNK Unmodified 1055.5512 0.55122751 1327 P08249;A0A0G2JF23;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 1 10.6 1.36 1 2 1 1 33.568 33.568 3;4 0.001491 7662 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.789 52.998 726.23 674.5 678.62 709.62 638.84 709.26 683 692 683 693 648 677 3 5 3 3 2 3 57483 10893 1327 10481 25537;25538;25539;25540;25541 29599;29600;29601;29602;29603 29603 5 KHHLDGETEEER Unmodified 1478.675 0.67498405 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 1 7.33 4.03 1 1 1 33.289 33.289 4 0.00019194 5764 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.537 63.593 336.19 166.77 271.91 258.82 434.1 414.79 315 167 260 250 436 399 6 3 4 4 7 7 17284 10894 1347 10482 25542;25543;25544 29604;29605;29606;29607;29608;29609;29610;29611 29610 8 KHIIEGLK Unmodified 936.57565 0.57565135 802 Q3UPV6;E0CXZ9;P62482;P63143 Kcnab2;Kcnab1 Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1 yes no 0 0 0 1 11 0 1 47.952 47.952 3 0.040568 10720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.59 36.965 0 0 164.74 139.49 138.99 0 0 0 158 139 139 0 0 0 1 1 1 0 3677.3 10895 802 10483 25545 29612 29612 1 KHIYIDK Unmodified 915.5178 0.51780212 3337 Q9WUM5;A0A0N4SVU4 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes no 0 0 0 1 11.5 1.5 1 1 41.879 41.879 4 0.03436 11858 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.405 13.973 69.106 63.606 300.2 162.87 94.242 202.54 65 65 288 167 93 190 1 1 2 2 1 1 29263 10896 3337 10484 25546;25547 29613;29614 29614 2 KHLEINPDHPIVETLR Unmodified 1910.0374 0.037395144 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 1 8.67 3.09 1 1 1 54.05 54.05 4 0.00052281 16182 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.424 42.801 245.9 254.06 295.02 341.01 285.69 240.41 232 259 296 333 296 232 3 3 2 3 3 2 21713 10897 1354 10485 25548;25549;25550 29615;29616;29617 29617 3 KHLEINPDHPIVETLR Deamidation (N) 1911.0214 0.021410729 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 1 0 1 8 0 1 54.752 54.752 5 0.00043443 15988 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.315 42.875 79.402 0 0 69.153 100.58 85.608 74 0 0 65 102 83 1 0 0 1 1 1 12214 10898 1354 10485 25551 29618 29618 423 1 KHLEINPDHSIIETLR Unmodified 1914.0323 0.032309766 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 7 0.816 1 1 1 60.611 60.611 4;5 0.0045812 20928 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.913 31.473 147.28 147.52 189.32 106.6 183.01 222.9 139 148 186 111 185 214 4 3 3 3 3 4 17006 10899 1322 10486 25552;25553;25554 29619;29620;29621;29622 29619 4 KHLGTLNFGGIR Unmodified 1311.7412 0.74115354 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 12 0 1 50.526 50.526 4 0.004023 10385 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.567 33.703 157.61 0 200.73 188.23 223.21 192.97 148 0 194 187 228 187 1 0 1 1 1 1 15662 10900 1151 10487 25555 29623 29623 1 KHNLLASK Unmodified 909.5396 0.53960019 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 11.4 1.02 1 2 1 1 39.202 39.202 3;4 0.0028766 7852 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.265 49.468 1469.7 915.42 2962.7 2458.9 1611.9 1933.2 1384 919 2880 2439 1638 1841 6 4 6 8 5 5 130640 10901 2148 10488 25556;25557;25558;25559;25560 29624;29625;29626;29627;29628;29629;29630;29631 29624 8 KHPDASVNFSEFSK Unmodified 1591.7631 0.76307078 116 A0A0J9YUD8;A0A0J9YUZ4;P63158;D3YZ18;D3YVC6 Hmgb1 High mobility group protein B1 yes no 0 0 0 1 6.5 0.5 1 1 53.878 53.878 4 5.2091E-05 16208 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.764 23.188 148.16 58.346 239.86 155.25 167.55 0 139 56 232 158 167 0 1 1 2 2 2 0 17047 10902 116 10489 25561;25562 29632;29633 29633 2 KHPEPFFALAK Unmodified 1283.7026 0.70264277 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 1 11 2 1 1 56.896 56.896 4 0.00073554 17198 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.346 45.741 457.52 187.43 310.96 356.8 325.55 276.65 429 195 295 349 332 265 3 2 1 3 2 1 35323 10903 2702 10490 25563;25564 29634;29635;29636 29634 3 KHQALQAEIAGHEPR Unmodified 1683.8805 0.88050057 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 10 3 1 1 40.044 40.044 4 0.0010181 11400 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.501 42.14 176.37 240 331.72 79.988 175.18 152.77 167 241 324 83 176 148 2 2 3 1 2 2 12591 10904 551 10491 25565;25566 29637;29638;29639 29638 3 KHQLLEADISAHEDR Unmodified 1760.8806 0.88056015 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6 0 2 47.829 47.829 4;5 0.0034856 14340 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.545 29.181 148.17 132.67 98.667 142.53 186.96 0 139 139 102 139 185 0 1 2 1 1 1 0 7882 10905 551 10492 25567;25568 29640;29641 29640 2 KHSAILASPNPDEK Unmodified 1505.7838 0.78380622 1197 O35526;D6RFB9 Stx1a Syntaxin-1A yes no 0 0 0 1 8 0 1 44.093 44.093 4 0.018175 11167 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.53 20.853 0 0 97.281 75.084 0 88.478 0 0 93 74 0 83 0 0 1 1 0 1 7855.8 10906 1197 10493 25569 29642 29642 1 KHSQFIGYPITLFVEK Unmodified 1906.0353 0.035269879 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 11 0.707 1 2 1 76.241 76.241 4;5 1.3304E-05 20389 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.433 56.127 624.51 156.39 473.11 662.72 450.13 779.19 585 157 455 633 454 743 8 2 5 8 5 9 45792 10907 1322 10494 25570;25571;25572;25573 29643;29644;29645;29646;29647;29648;29649;29650;29651;29652;29653 29652 11 KHSQFIGYPITLYLEK Unmodified 1936.0458 0.045834566 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 1 10 0 1 74.806 74.806 4 0.00017991 22619 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.716 41.429 109.04 80.96 0 111.49 0 108.73 102 83 0 102 0 102 1 1 0 1 0 1 8743.6 10908 1354 10495 25574 29654 29654 1 KHVLSGTLGIPEHTYR Unmodified 1806.9741 0.97406661 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 0 0 1 11 0.816 2 2 2 49.277 49.277 4;5 1.8191E-06 12004 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.464 57.829 353.19 560.87 693.51 828.07 276.84 715.3 331 554 675 782 279 674 3 6 6 5 4 5 104170 10909 309 10496 25575;25576;25577;25578;25579;25580 29655;29656;29657;29658;29659;29660;29661;29662 29657 8 KIAILGYR Unmodified 932.58074 0.58073672 2798 Q921J2 Rheb GTP-binding protein Rheb yes yes 0 0 0 1 6.5 5.5 1 1 55.732 55.732 3 0.01239 12293 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.692 48.896 172.17 248.91 327.99 152.05 172.52 302.09 162 250 324 150 176 288 1 2 2 1 1 2 24500 10910 2798 10497 25581;25582 29663;29664 29664 2 KIAQAQGLK Unmodified 955.58147 0.581465 3033 Q9D0S9 Hint2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 0 0 0 1 11 0 1 43.171 43.171 3 0.011254 8978 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.184 38.33 78.806 120 100.23 0 0 88.478 74 120 93 0 0 83 1 1 1 0 0 1 8395 10911 3033 10498 25583 29665;29666 29665 2 KICAVGITK Unmodified 988.57394 0.57393679 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 1 11 0 1 49.748 49.748 3 0.0068627 11566 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.03 35.378 0 0 125.21 104.02 0 0 0 0 120 102 0 0 0 0 1 1 0 0 8449.8 10912 3186 10499 25584 29667 29667 1 KICTASENFLR Unmodified 1337.6762 0.67617003 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 1 8.5 0.5 1 1 52.247 52.247 3 6.993E-06 15048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.94 75.181 722.16 2133.4 2686.1 2448.1 2541.4 2705.5 680 2093 2705 2430 2626 2606 1 2 2 2 2 2 273040 10913 1526 10500 25585;25586 29668;29669 29668 2 KIDLSHVTSK Unmodified 1126.6346 0.63462279 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 9.5 0.5 1 1 49.502 49.502 4 0.0017626 11506 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.153 33.744 463.34 502.71 328.66 507.45 163.02 785.25 436 507 343 485 167 741 2 2 1 2 1 2 40480 10914 1424 10501 25587;25588 29670;29671 29671 2 KIEASQTEFEK Unmodified 1308.6561 0.65614609 2001 Q3UPL0;S4R2A9;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 1 6 0 1 49.648 49.648 3 0.0011026 15175 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.891 45.922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10915 2001 10502 25589 29672 29672 1 KIEDLGAAMEEALILDNK Unmodified 1972.0187 0.018693117 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.83 2.41 2 2 1 1 90.215 90.215 3;4 1.325E-07 34247 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.89 82.459 274.99 151.52 244.18 191.22 247.68 66.579 257 149 236 181 241 65 7 5 7 7 6 2 31949 10916 551 10503 25590;25591;25592;25593;25594;25595 29673;29674;29675;29676;29677;29678;29679;29680;29681;29682;29683;29684;29685;29686 29673 14 KIEDLIK Unmodified 857.52222 0.52221879 3367 Q9Z0Y1;E9Q919 Dctn3 Dynactin subunit 3 yes no 0 0 0 1 8 0 1 58.412 58.412 3 0.048557 17900 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.351 1.7839 117.6 137.69 136.06 123.05 0 157.77 111 139 139 120 0 148 1 1 1 1 0 1 9043.4 10917 3367 10504 25596 29687 29687 1 KIENLQEQLR Unmodified 1269.7041 0.70409934 2249;1027 Q6PH08;Q3UHT7;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1;V9GX53 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 1 13 0 1 48.727 48.727 3 0.017351 15686 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.98 32.607 147.28 104.4 225.62 0 0 0 139 111 215 0 0 0 1 1 1 0 0 0 10494 10918 2249;1027 10505 25597 29688 29688 1 KIEPELEGSSAVTSHDSSTNGLISFIK Deamidation (N) 2846.4185 0.41854817 1316 P06745;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 1 0 1 6 0.816 1 1 1 73.228 73.228 4 1.3496E-12 26216 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.112 50.902 0 107.6 55.65 67.04 82.687 58.38 0 102 56 65 83 56 0 2 1 2 2 1 28277 10919 1316 10506 25598;25599;25600 29689;29690;29691 29690 385 3 KIEPELEGSSAVTSHDSSTNGLISFIK Unmodified 2845.4345 0.43453258 1316 P06745;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 1 6 0 1 73.107 73.107 5 0.0011831 26334 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.21 19.267 0 77.717 60.977 105.3 135.93 134.7 0 74 65 102 139 130 0 1 1 1 1 1 12233 10920 1316 10506 25601 29692 29692 1 KIEQELTAAK Unmodified 1129.6343 0.63428844 3091 Q9D8B3 Chmp4b Charged multivesicular body protein 4b yes yes 0 0 0 1 6.5 0.5 1 1 53.531 53.531 3 0.0023563 16039 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.644 31.038 186.87 171.53 187.36 278.33 240.13 250.05 176 176 195 269 250 241 2 2 2 2 2 2 17458 10921 3091 10507 25602;25603 29693;29694 29694 2 KIESFGSK Unmodified 894.48108 0.48108226 2849 Q99KR7 Ppif Peptidyl-prolyl cis-trans isomerase F, mitochondrial yes yes 0 0 0 1 9 0 1 46.469 46.469 3 0.05345 11473 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.567 24.48 218.32 224.47 266.91 190.67 0 253.71 206 229 268 189 0 238 1 1 1 1 0 1 16044 10922 2849 10508 25604 29695 29695 1 KIFDDAYK Unmodified 998.5073 0.50729701 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 8 0 1 55.144 55.144 3 0.037014 16212 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.699 16.715 0 276.64 0 209.45 196.18 312.07 0 260 0 195 207 298 0 1 0 1 1 1 34520 10923 1554 10509 25605 29696 29696 1 KIFTFAEK Unmodified 982.54877 0.54876789 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 1 11 0 1 60.572 60.572 3 0.04198 15978 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.149 18.395 178.55 126.28 0 172.69 0 244.11 167 130 0 158 0 229 1 1 0 1 0 1 20755 10924 432 10510 25606 29697 29697 1 KIFVGTK Unmodified 791.49052 0.49052473 1730 P62702;V9GWY0 Rps4x;Gm15013 40S ribosomal protein S4, X isoform;40S ribosomal protein S4 yes no 0 0 0 1 12 0 1 49.437 49.437 3 0.018466 9964 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.296 31.257 282 289.36 329.43 247.21 282.36 249.91 266 295 332 249 289 242 1 1 1 1 1 1 45429 10925 1730 10511 25607 29698 29698 1 KIFYVNYLSELSEHVK Unmodified 1968.0357 0.03566381 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 1 11 0 1 77.508 77.508 4 0.00059089 23503 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.7 35.489 60.088 0 0 49.091 63.088 77.084 56 0 0 46 65 74 1 0 0 1 1 1 5476.5 10926 2047 10512 25608 29699 29699 1 KIHGEIDIK Unmodified 1051.6026 0.60259438 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 7.5 1.12 1 1 1 1 47.239 47.239 4 0.0006512 13394 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.108 27.285 1045.7 1270.9 1120.2 1156.9 1484.8 1666.4 984 1267 1146 1132 1525 1603 5 5 4 4 6 6 55075 10927 1282 10513 25609;25610;25611;25612 29700;29701;29702;29703;29704;29705 29701 6 KIHPQTIISGWR Unmodified 1434.8096 0.80956746 1823 P80314;A0A1W2P7B7;A0A1W2P828 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 1 8.33 5.19 1 2 53.456 53.456 3;4 0.00043204 11284 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.312 60.705 91.591 96.932 133.29 133.26 105.25 88.673 86 99 130 131 108 86 2 3 2 3 2 2 31561 10928 1823 10514 25613;25614;25615 29706;29707;29708 29707 3 KIIQSAK Unmodified 786.49634 0.49633839 2895 Q9CPQ8;J3QNM7 Atp5l;Gm5426 ATP synthase subunit g, mitochondrial yes no 0 0 0 1 11 1 1 1 41.062 41.062 3 0.013797 8232 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.657 49.628 548.18 315.62 294.33 437.15 0 187.62 514 336 298 416 0 176 2 2 1 2 0 1 24342 10929 2895 10515 25616;25617 29709;29710 29709 2 KILGDYDIK Unmodified 1063.5914 0.59136099 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 10.5 2.5 1 1 58.276 58.276 3 0.0029819 19960 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.171 40.631 99.054 306.72 860.14 742.79 552.88 845.55 93 295 843 736 567 808 1 1 3 3 2 3 65377 10930 2173 10516 25618;25619 29711;29712;29713 29713 3 KILGYIK Unmodified 833.53747 0.53747492 1562 P47738;A0A0G2JEU1;A0A0G2JF60 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 1 12 0 1 59.006 59.006 3 0.052178 13760 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.038 19.32 304.89 371.02 380.19 306.83 264.29 361.29 288 374 386 306 278 346 1 1 1 1 1 1 24494 10931 1562 10517 25620 29714 29714 1 KILTFQGTK Unmodified 1034.6124 0.61243078 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 1 12 0 1 54.123 54.123 3 0.028505 11832 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.7 31.474 138.33 76.812 129.93 121.69 91.688 0 130 83 130 120 93 0 1 1 1 1 1 0 9232.3 10932 331 10518 25621 29715 29715 1 KIMSSPLSK Unmodified 989.55795 0.55795237 580 B1ARA3;P61255;B1ARA5 Rpl26 60S ribosomal protein L26 yes no 0 0 0 1 12 0 1 51.107 51.107 3 0.020942 10638 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.836 20.724 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 2773.6 10933 580 10519 25622 29716 29716 1 KINSLSPK Unmodified 885.52837 0.5283668 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 1 11 0.816 1 1 1 44.68 44.68 3 0.0029671 9710 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.61 60.729 691.23 663.23 500.37 792.81 577.84 1075.1 649 675 491 754 588 1018 2 3 2 3 3 3 56246 10934 3210 10520 25623;25624;25625 29717;29718;29719;29720 29718 4 KINVLQK Unmodified 841.53854 0.53853756 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 1 11 0 1 49.553 49.553 3 0.038503 11420 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.998 35.174 0 0 0 330.61 378.87 434.78 0 0 0 309 391 418 0 0 0 1 1 1 57042 10935 2249 10521 25626 29721 29721 1 KIPVVFR Unmodified 857.54871 0.54870831 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BK43 Esd S-formylglutathione hydrolase yes no 0 0 0 1 12 0 1 54.129 54.129 3 0.040771 11750 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.176 47.669 832.25 689 744.52 651.38 955.96 745.57 783 712 757 653 967 725 1 1 1 1 1 1 158070 10936 1122 10522 25627 29722 29722 1 KIQDHQVVINCAIPK Unmodified 1761.956 0.9559737 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173;E9QKR1 Enah Protein enabled homolog yes no 0 0 0 1 8 0 1 51.856 51.856 4 0.0040892 14763 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.3 29.019 48.959 0 67.132 66.253 42.075 87.277 46 0 65 65 46 83 1 0 1 1 1 1 3367.1 10937 56 10523 25628 29723 29723 1 KIQESYGDVYGICTK Unmodified 1759.8451 0.84508585 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 1 7 0 1 58.559 58.559 3 5.2674E-05 18578 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.911 56.587 48.513 54.715 95.588 33.906 44.552 58.425 46 56 93 37 46 56 1 1 1 1 1 1 5387.8 10938 1096 10524 25629 29724 29724 1 KIQFTVPLLEPHLDPEAAEQIR Unmodified 2543.3748 0.37477328 3189 Q9ERT9 Ppp1r1a Protein phosphatase 1 regulatory subunit 1A yes yes 0 0 0 1 8 0 1 76.904 76.904 4 1.1996E-11 26631 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.917 62.696 0 0 0 0 66.701 37.539 0 0 0 0 65 37 0 0 0 0 1 1 5585.9 10939 3189 10525 25630 29725 29725 1 KIQLVLK Unmodified 840.57967 0.57967409 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 1 6.5 5.5 1 1 59.352 59.352 3 0.018155 13563 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.784 28.23 355.88 320.57 328.34 318.3 399.66 485.35 335 329 336 316 412 466 2 2 2 2 2 2 27697 10940 1581 10526 25631;25632 29726;29727 29727 2 KIQMSNLMNQAR Unmodified 1432.7279 0.72788802 1597 P50518;A0A0N4SW07;A0A0N4SW34;A0A0N4SWA3 Atp6v1e1 V-type proton ATPase subunit E 1 yes no 0 0 0 1 11 0 1 52.999 52.999 3 5.7952E-05 12778 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.99 65.342 0 75.954 166.4 0 125.52 0 0 74 158 0 120 0 0 1 1 0 1 0 30123 10941 1597 10527 25633 29728 29728 1 KIQTTATTQAVQGR Unmodified 1501.8213 0.82125436 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 1 9 0 1 38.19 38.19 3 4.0461E-29 8117 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 158.35 129.78 56.613 0 42.995 0 67.99 0 53 0 40 0 65 0 1 0 1 0 1 0 5928.2 10942 3165 10528 25634 29729 29729 1 KIQVLQQQADDAEER Unmodified 1769.8908 0.89079049 782;926;757 D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3-rs7;Tpm3 no no 0 0 0 1 8 0 1 50.632 50.632 3 6.5041E-05 14184 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.578 70.943 0 29.033 45.424 58.501 0 0 0 28 46 56 0 0 0 1 1 1 0 0 10095 10943 757;782;926 10529 25635 29730 29730 1 KISAYMK Unmodified 839.45751 0.45751004 1347 P10649;A2AE89;F6WHQ7;D3YVP8 Gstm1;Gstm6 Glutathione S-transferase Mu 1 no no 0 0 0 1 11.5 0.5 1 1 47.98 47.98 3 0.038627 10659 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.954 27.974 0 164.04 454.84 231.48 444.98 226.19 0 158 439 229 443 218 0 1 2 1 2 1 33755 10944 1347 10530 25636;25637 29731;29732 29731 2 KISGTTALQEALK Unmodified 1358.7769 0.77692993 761;3358 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;F6RCU2;Q9Z0H8 Clip1;Clip2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 no no 0 0 0 1 9 0 1 59.017 59.017 3 0.00022566 17459 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.063 65.939 98.841 80.12 91.356 88.989 93.072 125.26 93 83 93 88 97 120 1 1 1 1 1 1 9371.2 10945 761;3358 10531 25638 29733 29733 1 KISSDLDGHPVPK Unmodified 1391.7409 0.74087877 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 8 0 1 46.751 46.751 4 0.0062368 12385 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.527 29.204 147.87 126.55 107.66 92.119 165.52 143.45 139 130 111 93 167 139 1 1 1 1 1 1 5811.7 10946 1537 10532 25639 29734 29734 1 KISSVQSIVPALEIANAHR Unmodified 2032.1429 0.14292285 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 10.7 0.471 1 2 65.458 65.458 3;4 0.0012053 18480 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.37 33.089 929.15 693.37 1375.1 760.86 1571.1 1023 875 727 1345 774 1569 992 1 1 2 1 2 1 93230 10947 1766 10533 25640;25641;25642 29735;29736;29737 29735 3 KISVVSATK Unmodified 931.57023 0.57023162 984 F6RJ39;Q9JIX8;B8JJ91;B8JJ90 Acin1 Apoptotic chromatin condensation inducer in the nucleus yes no 0 0 0 1 10 0 1 46.732 46.732 3 0.028505 10365 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.7 25.352 63.474 72.943 90.52 0 0 93.808 60 74 88 0 0 88 1 1 1 0 0 1 5853.6 10948 984 10534 25643 29738 29738 1 KITIGQSPTEK Unmodified 1200.6714 0.67140222 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 1 9 0 1 47.29 47.29 3 0.00035566 11857 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.295 67.281 99.335 0 76.246 74.556 94.725 96.435 93 0 74 74 97 93 1 0 1 1 1 1 7435.9 10949 2804 10535 25644 29739 29739 1 KITISDCGQL Unmodified 1133.5751 0.575059 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 1 7 0 1 58.559 58.559 3 0.019662 18526 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.776 30.789 197.51 141.41 227.82 65.131 204.13 151.94 186 149 222 65 203 148 2 2 2 1 2 2 70509 10950 1404 10536 25645 29740;29741 29740 2 KIVASFSK Unmodified 878.52255 0.52255314 115 A0A0J9YU92;Q8VDH1 Fbxo21 F-box only protein 21 yes no 0 0 0 1 6.5 5.5 1 1 52.172 52.172 3 0.02411 10929 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.73 34.118 78.856 158.06 219.57 46.968 0 266.5 74 157 214 46 0 250 1 2 2 1 0 2 11878 10951 115 10537 25646;25647 29742;29743 29743 2 KIVFVTGNAK Unmodified 1075.639 0.63897988 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 1 8 4.97 1 1 1 54.529 54.529 3 1.9284E-05 13111 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.32 80.694 29.817 53.486 84.793 37.123 145 158.96 28 51 83 37 144 153 1 1 2 1 2 3 62460 10952 3089 10538 25648;25649;25650 29744;29745;29746 29745 3 KIWCFGPDGTGPNILTDITK Unmodified 2232.1249 0.12488952 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 1 9.67 0.471 1 2 84.392 84.392 4;5 0.0002533 29508 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.865 33.148 109.22 64.148 19.365 51.041 182.8 0 102 65 19 47 177 0 2 2 1 1 3 0 18541 10953 1652 10539 25651;25652;25653 29747;29748;29749;29750 29748 4 KIWCFGPDGTGPNILTDITK Deamidation (N) 2233.1089 0.10890511 1652 P58252 Eef2 Elongation factor 2 yes yes 0 1 0 1 13 0 1 83.032 83.032 4 2.1575E-10 32301 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.479 56.587 79.402 0 0 59.295 101.69 66.388 74 0 0 56 102 65 1 0 0 1 1 1 6140.8 10954 1652 10539 25654 29751 29751 633 1 KIWELELINVLK Unmodified 1496.8967 0.89665113 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R235;K4DI73 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 1 10 0 1 95.065 95.065 3 0.0038483 31073 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.224 38.113 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10955 3447 10540 25655 29752 29752 1 KIYANFFPYGDASK Unmodified 1619.7984 0.79839365 1832;1734 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5 Hpcal1;Hpca Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 1 11.5 0.5 1 1 68.495 68.495 3 0.0003223 17298 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.272 45.337 0 83 0 29.927 36.008 38.414 0 83 0 28 37 37 0 1 0 1 1 1 21946 10956 1734;1832 10541 25656;25657 29753;29754 29754 2 KIYGNFFPYGDASK Unmodified 1605.7827 0.78274359 2763 Q91X97;D3YVA2;D3Z2Z8;D3Z1M0 Ncald Neurocalcin-delta yes no 0 0 0 1 11 0 1 66.071 66.071 3 0.0039028 18270 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.885 36.496 59.636 0 75.928 86.194 0 0 56 0 74 83 0 0 1 0 1 1 0 0 5422.9 10957 2763 10542 25658 29755 29755 1 KIYSTLAGTR Unmodified 1108.6241 0.6240581 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 8 4.97 1 1 1 47.474 47.474 2;3 0.0023506 10361 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.674 54.53 648.81 80.358 172.23 736.12 65.231 407.98 606 88 171 684 75 384 2 1 1 3 2 2 94830 10958 2396 10543 25659;25660;25661 29756;29757;29758 29757 3 KLAAAEGSEPK Unmodified 1099.5873 0.58733824 766 D3Z3A0;Q9DCL8 Ppp1r2 Protein phosphatase inhibitor 2 yes no 0 0 0 1 7 0 1 42.382 42.382 3 0.042154 11007 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.481 21.689 39.118 0 98.001 54.509 45.612 0 37 0 93 56 46 0 1 0 1 1 1 0 6230.8 10959 766 10544 25662 29759 29759 1 KLAAQSCALSLVR Unmodified 1415.7919 0.79186849 16 A0A087WPL5;E9QNN1;O70133;Q3UR42;A0A0R4J2C3 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 1 12 0 1 55.566 55.566 3 0.0016385 12381 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.472 28.886 0 0 53.278 42.731 0 44.772 0 0 51 42 0 42 0 0 1 1 0 1 2977.2 10960 16 10545 25663 29760 29760 1 KLAAVTYNGVDNNK Deamidation (N) 1506.7678 0.7678218 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 1 8.5 0.5 1 1 53.231 53.231 3 2.518E-09 15493 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.58 104.02 0 77.881 51.157 166.9 81.908 0 0 74 56 162 83 0 0 1 1 2 1 0 15964 10961 879 10546 25664;25665 29761;29762 29761 235 2 KLADQCTGLQGFLVFHSFGGGTGSGFTSLLMER Unmodified 3517.7122 0.71224454 1313;1794 P05213;A0A2R8VHF3;P68369 Tuba1b;Tuba1a Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 1 11 0 1 90.447 90.447 4 0.0056367 29061 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.076 25.12 0 40.432 0 0 0 29.848 0 38 0 0 0 28 0 1 0 0 0 1 8066.8 10962 1313;1794 10547 25666 29763 29763 1 KLAEWVAIQSVSAWPEK Unmodified 1941.036 0.035998161 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 1 10 0 1 85.063 85.063 4 0.00012706 27126 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.226 45.284 0 0 0 0 37.714 28.772 0 0 0 0 37 28 0 0 0 0 1 1 2655.3 10963 3038 10548 25667 29764 29764 1 KLAPPLVTLLSAEPELQYVALR Unmodified 2420.4043 0.40428249 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 1 11 0.816 1 1 1 94.936 94.936 4 0.0069084 30621 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 34.65 26.15 30.044 9.4378 8.2686 60.19 27.906 14.924 28 9 9 56 28 14 2 1 1 3 1 1 4876 10964 1203 10549 25668;25669;25670 29765;29766;29767 29766 3 KLAPPLVTLLSGEPEVQYVALR Unmodified 2392.373 0.37298236 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 1 11 0.816 2 2 2 89.158 89.158 3;4 4.7262E-16 28427 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.227 85.087 19 77.98 64.139 55.683 4.8828 78.884 19 75 65 53 5 74 1 4 2 2 1 2 52206 10965 3123 10550 25671;25672;25673;25674;25675;25676 29768;29769;29770;29771;29772;29773;29774;29775 29771 8 KLAQQYYLVYQEPIPTAQLVQR Unmodified 2648.4326 0.43262251 1589 P49722;Q8BKE0 Psma2 Proteasome subunit alpha type-2 yes no 0 0 0 1 10.7 0.471 1 2 73.256 73.256 3;4 1.0489E-11 21376 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.015 62.367 39.701 37.923 86.444 63.775 112.59 47.443 37 37 83 65 112 46 1 1 1 2 2 1 46311 10966 1589 10551 25677;25678;25679 29776;29777;29778 29777 3 KLASDAGIFFTR Unmodified 1324.7139 0.71393574 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 1 9 0 1 64.694 64.694 3 0.046443 20151 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.941 18.649 127.35 67.132 180.49 118.4 106.71 115.28 120 74 176 120 111 111 1 1 1 1 1 1 11071 10967 533 10552 25680 29779 29779 1 KLAVNMVPFPR Oxidation (M) 1286.7169 0.71691263 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 1 8.71 4.89 2 1 4 61.793 61.793 3;4 0.00037196 14162 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.07 52.954 246.68 254.67 64.444 296.19 377.53 193.59 231 256 65 281 380 188 2 3 1 3 3 3 33201 + 10968 1863;647;1795;2283;2805;2975;3072;3183 10553 25681;25682;25683;25684;25685;25686;25687 29780;29781;29782;29783;29784;29785;29786;29787 29785 30 8 KLAVNMVPFPR Unmodified 1270.722 0.72199801 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 1 6.17 5.21 6 1 3 1 1 67.01 67.01 2;3;4 4.8753E-14 22228 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.11 109.68 8201.2 4963.4 8745.6 6623.2 7241.2 8450.3 7713 5285 8615 6617 7454 8110 24 22 20 26 24 21 3188200 + 10969 1863;647;1795;2283;2805;2975;3072;3183 10553 25688;25689;25690;25691;25692;25693;25694;25695;25696;25697;25698;25699 29788;29789;29790;29791;29792;29793;29794;29795;29796;29797;29798;29799;29800;29801;29802;29803;29804;29805;29806;29807;29808;29809;29810;29811;29812;29813;29814;29815;29816;29817 29791 30 KLAVNMVPFPR Deamidation (N) 1271.706 0.70601359 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 1 10.2 0.748 1 2 2 65.787 65.787 3 0.00030762 18215 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.18 80.651 472.89 227.7 660.63 476.27 595.62 463.84 444 235 645 476 602 443 2 2 4 3 3 3 95992 + 10970 1863;647;1795;2283;2805;2975;3072;3183 10553 25700;25701;25702;25703;25704 29818;29819;29820;29821;29822 29819 188 5 KLAYVAAGDLAPINAFIGGLAAQEVMK Unmodified 2730.4779 0.47785814 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 1 11.2 0.433 3 1 103.23 103.23 4;5 1.3109E-11 34105 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.488 55.031 32.19 59.37 12.799 0 0 77.818 30 56 14 0 0 73 2 3 2 0 0 4 7652.6 10971 1876 10554 25705;25706;25707;25708 29823;29824;29825;29826;29827;29828 29824 6 KLCALYGK Unmodified 951.52117 0.52117293 2021 Q3V156;Q91XL9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 1 12 0 1 52.192 52.192 3 0.017723 11137 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.825 40.767 199.46 160.15 244.53 199.06 148.07 234.56 188 167 244 198 158 224 1 1 1 1 1 1 9399.3 10972 2021 10555 25709 29829 29829 1 KLCGTVLGGPK Unmodified 1128.6325 0.6325143 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 1 11 0 1 51.157 51.157 3 0.0047552 12106 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.091 38.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10973 1344 10556 25710 29830 29830 1 KLCQGLFFR Unmodified 1167.6223 0.62228396 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 1 12 0 1 59.898 59.898 3 0.033591 14106 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.591 36.929 108.69 150.14 0 108.91 136.79 104.83 102 148 0 102 139 102 1 1 0 1 1 1 15998 10974 3234 10557 25711 29831 29831 1 KLDEAVAEAHLGK Unmodified 1379.7409 0.74087877 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 1 6.5 0.5 1 1 55.007 55.007 4 0.0016924 17839 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.648 33.043 264.87 292.81 319.39 348.31 227.28 341.03 250 297 327 340 233 326 2 2 2 2 1 2 13976 10975 1594 10558 25712;25713 29832;29833 29832 2 KLDEQYQK Unmodified 1050.5346 0.53457439 1701 P61759;Q3TIR6 Vbp1 Prefoldin subunit 3 yes no 0 0 0 1 7 0 1 42.429 42.429 3 0.027808 11005 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.78 23.377 78.071 110.67 129.93 82.975 0 0 74 111 130 83 0 0 1 1 1 1 0 0 6223.9 10976 1701 10559 25714 29834 29834 1 KLDHVNVVK Unmodified 1050.6186 0.61857879 2679 Q8VBY2;B1AUD3 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes no 0 0 0 1 8 0 1 45.157 45.157 4 0.0023534 11633 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.889 33.532 87.568 119.28 149.44 69.565 128.15 134.92 83 120 148 74 130 130 1 1 1 1 1 1 3355.6 10977 2679 10560 25715 29835 29835 1 KLDLDNSGSLSVEEFMSLPELQQNPLVQR Unmodified 3285.6551 0.65510682 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 1 7 0.816 1 1 1 92.325 92.325 4 0.00030272 33525 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.562 35.334 24.679 0 38.685 29.431 0 24.518 23 0 38 28 0 23 2 0 2 2 0 2 9772.8 10978 2164 10561 25716;25717;25718 29836;29837;29838;29839;29840 29840 5 KLDLEAWFPGSGAFR Unmodified 1692.8624 0.86239089 1460 Q8C483;P26638;A2AFS0 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 1 10.5 0.5 1 1 82.682 82.682 3 6.3145E-05 26323 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.772 45.083 99.789 59.584 0 0 218.54 123.89 93 56 0 0 213 120 1 1 0 0 2 1 28224 10979 1460 10562 25719;25720 29841;29842 29841 2 KLDLFANVVHVK Unmodified 1381.8082 0.80817048 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 1 11.8 0.829 2 1 1 67.148 67.148 3;4 0.00010632 18704 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.769 55.8 1125.8 1070.1 1310.1 899.03 730.42 1670.9 1057 1085 1246 843 768 1587 4 4 3 2 2 3 224270 10980 2734 10563 25721;25722;25723;25724 29843;29844;29845;29846;29847;29848 29843 6 KLDLSNVQSK Unmodified 1130.6295 0.62953741 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 1 9.8 1.72 1 2 1 1 51.378 51.378 3;4 0.00055001 16712 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.781 56.11 1252.7 1292.3 2044.9 1367.5 1568.1 2245 1180 1314 2019 1366 1585 2148 5 5 4 3 3 5 221120 10981 572;46 10564 25725;25726;25727;25728;25729 29849;29850;29851;29852;29853;29854 29854 6 KLDPAQSASR Unmodified 1071.5673 0.5672715 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 8 1 1 1 35.466 35.466 3 0.0017792 7819 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.335 49.383 369.79 324.89 332.29 149.48 133.7 376.75 348 334 333 148 140 357 2 2 2 1 1 2 55956 10982 551 10565 25730;25731 29855;29856 29855 2 KLDPGSEETQTLVR Unmodified 1571.8155 0.81550028 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 1 8 3.56 1 1 1 50.213 50.213 3 0.000125 16202 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.879 67.526 206.7 68.262 188.42 148.4 171.33 173.13 194 74 185 149 176 167 2 1 2 2 2 2 25431 10983 3094 10566 25732;25733;25734 29857;29858;29859 29857 3 KLDQVEK Unmodified 858.48108 0.48108226 3110 Q9DB20;A0A338P776;F6XVM5 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 1 7.5 0.5 1 1 42.75 42.75 3 0.020894 11209 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.934 13.896 1081.1 700.51 1474.1 1012.7 992.21 1532.3 1019 723 1448 1024 1013 1464 2 1 2 2 1 2 74085 10984 3110 10567 25735;25736 29860;29861 29860 2 KLDSPQGTNK Unmodified 1086.5669 0.56693715 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 1 7 0 1 38.244 38.244 3 0.015078 9047 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.164 22.786 29.689 0 59.706 16.526 36.294 48 28 0 56 19 37 46 1 0 1 1 1 1 2345.9 10985 3192 10568 25737 29862 29862 1 KLEAAATALATK Unmodified 1186.6921 0.69213767 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 1 9 0 1 60.922 60.922 3 0.00047782 18344 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.285 56.054 0 0 0 109.4 111.08 0 0 0 0 102 111 0 0 0 0 1 1 0 9463.2 10986 3093 10569 25738 29863 29863 1 KLEAAEDIAYQLSR Unmodified 1605.8362 0.83623572 1788 P67778 Phb Prohibitin yes yes 0 0 0 1 7 0.816 1 1 1 73.306 73.306 3 0.0001033 25483 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.148 51.931 246.59 185.83 236.49 266.71 179.32 330.67 232 194 241 260 194 315 3 3 3 3 3 3 30757 10987 1788 10570 25739;25740;25741 29864;29865;29866 29865 3 KLEAAEER Unmodified 944.49271 0.49270958 1619;1629 P54227;D3Z5N2;D3Z1Z8;Q05DI3;D3Z4C2;G3X9Z6;P63042;P55821 Stmn1;Stmn4;Stmn2 Stathmin;Stathmin-4;Stathmin-2 no no 0 0 0 1 9.5 3.5 1 1 34.356 34.356 3 0.032521 8294 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.102 18.676 765.04 192.86 920.24 1001.7 1126.3 982.69 719 202 906 986 1153 952 2 1 2 2 2 2 81539 10988 1619;1629 10571 25742;25743 29867;29868 29867 2 KLEALLQGGEVEEVILQAEK Unmodified 2195.2049 0.20491398 2892 Q9CPP6;D3YTQ8 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 1 8.5 2.69 1 1 1 1 92.407 92.407 3;4 2.3969E-10 35374 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.231 66.195 0 59.127 57.619 0 87.864 9.594 0 56 56 0 84 9 0 3 3 0 3 1 7581.1 10989 2892 10572 25744;25745;25746;25747 29869;29870;29871;29872 29872 4 KLEDGPK Unmodified 785.42832 0.42831841 1341 P10126 Eef1a1 Elongation factor 1-alpha 1 yes yes 0 0 0 1 7 0 1 39.425 39.425 3 0.043396 9566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.224 28.021 364.52 320.12 320.29 377.38 480.31 403.1 343 329 331 371 489 391 1 1 1 1 1 1 76051 10990 1341 10573 25748 29873 29873 1 KLEDNPK Unmodified 842.44978 0.44978213 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 1 13 0 1 36.895 36.895 3 0.046302 9916 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.169 6.7331 671.11 677.88 786.91 704.68 893.17 827.31 633 692 797 703 912 800 1 1 1 1 1 1 59833 10991 1729 10574 25749 29874 29874 1 KLEEEGEQFVK Unmodified 1334.6718 0.67179615 1501 P32020 Scp2 Non-specific lipid-transfer protein yes yes 0 0 0 1 5 0 1 56.98 56.98 3 9.4734E-08 19284 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.09 79.075 59.289 73.534 72.013 75.059 81.4 57.373 56 74 74 74 83 56 1 1 1 1 1 1 6810.5 10992 1501 10575 25750 29875 29875 1 KLEELELDEQQR Unmodified 1528.7733 0.77330111 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 1 6.2 3.54 1 1 1 1 1 55.781 55.781 3 3.8032E-18 17954 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.35 114.15 495.4 822.35 937.22 501.23 728.2 1061.2 466 817 924 496 740 1015 5 8 7 5 6 9 88620 10993 1500 10576 25751;25752;25753;25754;25755 29876;29877;29878;29879;29880;29881;29882;29883;29884 29884 9 KLEEVIQILGDNFPCTLEAQK Unmodified 2444.2621 0.26211129 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 1 9 0 2 98.461 98.461 4 8.0898E-06 35125 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.228 46.583 0 0 0 0 14 28 0 0 0 0 14 28 0 0 0 0 1 1 4694.6 10994 3089 10577 25756;25757 29885;29886 29885 2 KLEHTWK Unmodified 940.51305 0.51305109 1044 F8WHW6;O70161;F7C0X9 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 1 9 0 1 43.434 43.434 4 0.035942 10158 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.472 21.251 89.059 0 0 142.09 0 0 83 0 0 130 0 0 1 0 0 1 0 0 9349.1 10995 1044 10578 25758 29887 29887 1 KLELSENR Unmodified 987.53491 0.53490874 720 D3YYE1;D3Z7M9;O35381;F6UFG6;Q64G17;Q9EST5 Anp32a;Anp32c;Anp32b Acidic leucine-rich nuclear phosphoprotein 32 family member A;Putative acidic leucine-rich nuclear phosphoprotein 32 family member C;Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 1 13 0 1 40.252 40.252 3 0.056577 11557 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.591 19.981 254.49 0 328.83 289.11 323.09 347.89 239 0 317 288 333 335 1 0 1 1 1 1 21056 10996 720 10579 25759 29888 29888 1 KLENCNYAVELGK Unmodified 1536.7606 0.76062794 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 1 7 0 1 56.653 56.653 3 3.1836E-05 17679 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.17 0 0 0 46.731 68.26 0 49.036 0 0 46 65 0 46 0 0 1 1 0 1 3223.7 10997 269 10580 25760 29889 29889 1 KLESASASASEGK Unmodified 1263.6307 0.63065962 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 1 7 0 1 40.656 40.656 3 0.0090264 10181 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.546 33.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10998 2226 10581 25761 29890 29890 1 KLETAVNLAWTAGNSNTR Unmodified 1945.0017 0.0017379196 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 1 9.29 3.65 1 2 1 1 1 1 65.986 65.986 3;4 7.3142E-08 18527 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.188 93.837 377.59 120.54 423.49 471.2 370.65 376.95 353 120 412 465 380 363 5 2 6 8 6 8 208360 10999 978;2097 10582 25762;25763;25764;25765;25766;25767;25768 29891;29892;29893;29894;29895;29896;29897;29898;29899;29900 29894 10 KLETAVNLAWTAGNSNTR Deamidation (N) 1945.9858 0.9857535 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 1 0 1 8 0 1 67.435 67.435 3 0.0024503 22115 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.522 50.69 59.736 0 59.131 26.031 55.751 47.445 56 0 56 28 56 46 1 0 1 1 1 1 8592.6 11000 978;2097 10582 25769 29901 29901 260 1 KLEVEANNAFDQYR Unmodified 1695.8216 0.82164829 495;1565 A2AMW0;F7CAZ6;P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta no no 0 0 0 1 7.75 3.11 1 1 1 1 59.364 59.364 3 2.0431E-16 19650 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 127.57 112.06 226.63 282.9 216.55 176.46 233.93 531.65 213 278 215 176 243 505 2 2 1 1 2 3 61055 11001 495;1565 10583 25770;25771;25772;25773 29902;29903;29904;29905 29903 4 KLEWPLSK Unmodified 999.57532 0.57531699 2899 Q9CPV4;E9Q197;F6ZTG3;F7BB55 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 1 10 0.816 1 1 1 63.106 63.106 3 0.013122 19486 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.841 33.652 87.64 225.73 337.19 229.35 416.77 85.877 83 223 334 232 420 83 1 2 2 2 3 1 64698 11002 2899 10584 25774;25775;25776 29906;29907;29908 29906 3 KLFADAEEEQR Unmodified 1334.6466 0.64664404 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 8.5 2.69 1 1 1 1 48.902 48.902 3 0.00027674 13289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.649 55.015 344.08 636.5 699.01 320.51 235.22 535.88 324 631 690 315 252 509 3 4 3 2 2 3 138350 11003 1554 10585 25777;25778;25779;25780 29909;29910;29911;29912 29911 4 KLFIGGLSFETTDDSLR Unmodified 1897.9785 0.97854286 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1 10 0.707 1 2 1 76.688 76.688 3;4 1.8477E-06 23563 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.92 85.863 0 57.29 197.81 20.082 36.424 88.505 0 56 186 19 37 84 0 1 2 1 1 2 29182 11004 626;486 10586 25781;25782;25783;25784 29913;29914;29915;29916 29915 4 KLFIGGLSFETTDESLR Unmodified 1911.9942 0.99419293 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 1 10 0.816 1 1 1 76.095 76.095 3 1.1318E-05 22511 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.929 61.59 133.32 90.653 58.229 101.65 76.124 165.19 125 93 56 93 74 157 3 2 1 2 1 3 35103 11005 1586 10587 25785;25786;25787 29917;29918;29919 29919 3 KLFIGGLSFETTEESLR Unmodified 1926.0098 0.0098429899 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 1 10 0.707 1 2 1 76.749 76.749 3 7.8616E-06 23715 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.543 64.408 88.627 269.69 304.11 216.59 248.25 283.84 83 259 299 213 250 269 2 2 2 2 2 3 67672 11006 1271 10588 25788;25789;25790;25791 29920;29921;29922;29923;29924 29923 5 KLFLAPK Unmodified 815.52691 0.52691024 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 1 1 0 1 59.242 59.242 3 0.05148 19228 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11007 3249 10589 25792 29925 29925 1 KLFLVNNK Unmodified 974.5913 0.59130141 1995 Q3UM45;A0A087WRA7 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 1 6.5 5.5 1 1 57.688 57.688 3 0.00063976 18926 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 139.88 91.842 517.65 630.07 574.24 512.02 710.87 714.19 488 634 583 512 719 689 2 3 2 2 2 3 48086 11008 1995 10590 25793;25794 29926;29927;29928 29926 3 KLFLVQLQEK Unmodified 1244.7493 0.74925861 2926 Q9CQF3;A0A1D5RM23;A0A1D5RLT7;A0A1D5RLS2 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 1 12 0 1 68.589 68.589 3 2.6382E-05 17291 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.9 74.943 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11009 2926 10591 25795 29929 29929 1 KLFNLSK Unmodified 848.51199 0.51198846 1736 P62754 Rps6 40S ribosomal protein S6 yes yes 0 0 0 1 12 0 1 57.489 57.489 3 0.040088 13124 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.423 28.394 191.06 161.25 212.62 186.19 177.99 202.79 180 167 214 185 185 195 1 1 1 1 1 1 11922 11010 1736 10592 25796 29930 29930 1 KLFVGGLK Unmodified 860.54837 0.54837396 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 1 5.86 5.62 4 2 1 59.093 59.093 3 0.006126 19880 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.069 0 3219.7 2943.7 3884 3244.9 3732.5 4226.8 3033 2980 3899 3224 3812 4065 9 10 12 12 9 12 264340 11011 2985 10593 25797;25798;25799;25800;25801;25802;25803 29931;29932;29933;29934;29935;29936;29937;29938;29939;29940;29941;29942;29943 29934 13 KLFVPNTQTGQR Unmodified 1387.7572 0.75719754 2206 Q6NVF0 Ocrl Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 1 12 0 1 47.682 47.682 3 0.0002129 9451 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.813 67.949 0 35.488 41.151 0 0 49.036 0 34 40 0 0 46 0 1 1 0 0 1 7547.2 11012 2206 10594 25804 29944 29944 1 KLFVQDLTTR Unmodified 1219.6925 0.69247202 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 1 10 0 1 58.559 58.559 3 0.016129 15393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.172 23.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11013 1481 10595 25805 29945 29945 1 KLFVSCTIQSIDEK Unmodified 1666.86 0.86000763 2007 Q3UUI3 Them4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 0 0 1 10 0 2 68.063 68.063 3;4 9.9737E-11 19562 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.08 89.432 60.088 0 0 39.57 114.29 0 56 0 0 37 111 0 1 0 0 1 2 0 13005 11014 2007 10596 25806;25807 29946;29947 29947 2 KLGAAPPPTK Unmodified 978.58622 0.58621603 2656 Q8R307 Vps18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 1 10 0 1 42.286 42.286 3 0.053152 8648 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.706 25.199 24.442 0 39.911 0 46.477 47.71 23 0 37 0 46 46 1 0 1 0 1 1 2615.3 11015 2656 10597 25808 29948 29948 1 KLGCEVLGVSVDSQFTHLAWINTPR Unmodified 2826.4487 0.44868328 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 1 11 0 1 78.786 78.786 4 0.029449 24138 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 28.404 12.704 29.875 0 28.419 38.747 0 0 28 0 28 37 0 0 1 0 1 1 0 0 3760.6 11016 2116 10598 25809 29949 29949 1 KLGGDVSPTQIDVSQFGSFK Unmodified 2109.0742 0.074234161 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 8.5 0.5 1 1 72.364 72.364 4 8.6578E-11 23708 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.231 64.574 148.15 65.854 111.86 178.39 156.51 157.77 139 65 107 172 153 148 2 1 1 2 1 1 17458 11017 1382 10599 25810;25811 29950;29951 29951 2 KLGIQSFNK Unmodified 1033.592 0.59202969 2172 Q64314 Cd34 Hematopoietic progenitor cell antigen CD34 yes yes 0 0 0 1 11.5 0.5 1 1 53.691 53.691 3 0.0057034 12912 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.066 42.323 99.324 92.255 0 192.37 0 99.138 93 93 0 176 0 93 1 1 0 1 0 1 6692.3 11018 2172 10600 25812;25813 29952;29953 29952 2 KLGTEEFPLIDQTFYPNHK Unmodified 2276.1477 0.14773345 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 7.75 0.829 2 1 1 72.053 72.053 4;5 7.68E-08 24996 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.958 81.498 423.91 463.88 413.57 430.03 365.6 343.07 398 464 408 417 361 324 5 6 5 5 3 4 109970 11019 1282 10601 25814;25815;25816;25817 29954;29955;29956;29957;29958;29959;29960 29954 7 KLGVPAMR Unmodified 870.51094 0.5109426 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 1 11 0 1 45.902 45.902 3 0.051561 9985 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.157 35.833 760.48 692.46 0 0 0 0 712 699 0 0 0 0 1 1 0 0 0 0 25411 11020 860 10602 25818 29961 29961 1 KLHQEEK Unmodified 910.48723 0.48723027 3317 Q9R1T4 Sept6 Septin-6 yes yes 0 0 0 1 7 1 1 1 33.457 33.457 4 0.02912 8110 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.495 29.326 48.708 55.255 164.48 96.222 90.567 66.706 46 56 167 93 93 65 1 1 2 1 1 1 8553 11021 3317 10603 25819;25820 29962;29963 29962 2 KLIGQLNLK Unmodified 1025.6597 0.65971533 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 1 1 0 1 61.96 61.96 3 0.028892 20534 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.539 17.428 48.961 0 66.75 74.834 110.07 75.743 46 0 65 74 111 74 1 0 1 1 1 1 5080.6 11022 1813 10604 25821 29964 29964 1 KLIGSVDDLLPSLPASSR Unmodified 1867.0415 0.041477469 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 9.67 0.471 1 2 77.27 77.27 3;4 0.0022368 23684 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.229 27.848 29.807 105.86 199.35 91.052 29.288 88.478 28 102 194 92 28 83 1 2 3 2 1 2 14118 11023 3261 10605 25822;25823;25824 29965;29966;29967 29966 3 KLIGTAVPQR Unmodified 1081.6608 0.66077796 2243 Q6PER3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes yes 0 0 0 1 11.5 0.5 1 1 44.898 44.898 3 0.0027246 9524 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.695 40.595 54.229 211.08 376.54 49.525 67.586 67.361 51 203 362 51 69 65 1 1 2 1 1 1 135420 11024 2243 10606 25825;25826 29968;29969 29968 2 KLIVQPNTR Unmodified 1067.6451 0.64512789 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 1 11 0 1 42.409 42.409 3 0.04563 8645 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.473 29.571 0 108.53 0 0 184.1 0 0 102 0 0 176 0 0 1 0 0 1 0 15829 11025 2845 10607 25827 29970 29970 1 KLLDELSDPEASK Unmodified 1443.7457 0.74568938 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 13 0 1 65.187 65.187 3 0.027725 23720 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.807 18.18 138.13 106.47 138.85 100.26 156.75 113.85 130 111 139 102 158 111 1 1 1 1 1 1 6163.3 11026 570 10608 25828 29971 29971 1 KLLEAHEEQNSEAYTEAVK Unmodified 2188.0648 0.064791686 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 1 5.5 0.5 1 1 55.476 55.476 4 1.1627E-07 18901 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.725 70.126 69.243 81.258 142.64 56.837 55.965 88.478 65 83 139 56 56 83 1 2 2 1 1 1 8349 11027 1478 10609 25829;25830 29972;29973 29972 2 KLLEAQSHFR Unmodified 1227.6724 0.67240528 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9.5 0.5 1 1 44.614 44.614 4 0.00034153 9581 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.441 59.388 128.89 83.638 87.01 125.19 99.878 175.17 121 83 83 121 102 167 2 1 1 2 1 2 29235 11028 551 10610 25831;25832 29974;29975 29975 2 KLLEATELK Unmodified 1043.6227 0.62266112 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9 0.816 1 1 1 59.506 59.506 3 0.00045777 15561 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.86 44.742 1021.2 581.38 826.55 967.71 904.35 1002.9 959 597 822 946 940 965 4 3 3 4 4 4 74478 11029 551 10611 25833;25834;25835 29976;29977;29978;29979 29979 4 KLLEGEENR Unmodified 1086.5669 0.56693715 1304 P03995;Q6IFZ8 Gfap;Gm5414 Glial fibrillary acidic protein no no 0 0 0 1 7 1 1 1 41.521 41.521 3 0.0020543 11681 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.134 53.961 177.7 172.86 145.14 229.11 259.51 86.458 167 176 148 222 261 83 1 2 1 2 2 1 30066 11030 1304 10612 25836;25837 29980;29981 29980 2 KLLEGEESR Unmodified 1059.556 0.55603812 1423;1493 P20152;A0A0A6YWC8;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__P05787;Q9DCV7;P11679;G5E846;CON__Q9H552;A0A2R8W6R6;G3X981;P15331;P31001 Vim;Krt7;Krt8;Prph;Des Vimentin;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 8;Peripherin;Desmin no no 0 0 0 1 13 0 1 40.122 40.122 3 0.0014615 11492 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.096 50.013 0 144.69 191.49 0 192.41 184.26 0 139 185 0 190 178 0 1 1 0 1 1 7335.2 11031 1423;1493 10613 25838 29982 29982 1 KLLEGEETR Unmodified 1073.5717 0.57168818 154;1557;1329 P46660;A0A0R4J036;P08553;P08551 Ina;Nefm;Nefl Alpha-internexin;Neurofilament medium polypeptide;Neurofilament light polypeptide no no 0 0 0 1 8.33 3.4 1 1 1 42.448 42.448 3 0.019028 11810 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.63 16.233 1062.4 466.66 1017.6 509.82 861.28 1285.5 998 482 988 511 888 1229 3 1 2 2 3 3 88343 11032 1557;154;1329 10614 25839;25840;25841 29983;29984;29985 29985 3 KLLGPISQK Unmodified 982.61752 0.61751616 635 B7ZDF7;Q3UJF1;B7ZDF5;Q9Z2V6 Hdac5 Histone deacetylase;Histone deacetylase 5 yes no 0 0 0 1 12 0 1 53.518 53.518 3 0.0054452 11541 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.533 47.935 0 45.752 0 60.329 46.735 50.9 0 43 0 56 49 49 0 1 0 1 1 1 3419.3 11033 635 10615 25842 29986 29986 1 KLLGPLGMK Unmodified 955.58886 0.58885857 1028 F8VPN4;F6XXE6 Agl yes no 0 0 0 1 1 0 1 64.464 64.464 3 0.012912 21689 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.654 30.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11034 1028 10616 25843 29987 29987 1 KLLGQQVVSPVK Unmodified 1294.7973 0.79727144 2659 Q8R3F5 Mcat Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 0 0 0 1 11.5 0.5 1 1 56.296 56.296 3 0.0057925 12773 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.899 38.313 138.61 0 147.53 48.61 154.81 79.95 130 0 139 46 148 75 2 0 2 1 1 1 6482.9 11035 2659 10617 25844;25845 29988;29989 29989 2 KLLHSFLPK Unmodified 1081.6648 0.6648007 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 1 1 0 1 68.742 68.742 4 0.055405 23365 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 39.018 22.794 29.782 17.722 29.083 0 28.62 19.437 28 19 28 0 28 19 1 1 1 0 1 1 772.85 11036 3305 10618 25846 29990 29990 1 KLLIIGTTSR Unmodified 1100.6917 0.69174374 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 1 0 1 57.498 57.498 3 0.0036634 18305 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.728 29.226 208.41 163.63 0 188.28 217.33 181.41 195 167 0 176 222 176 2 2 0 2 2 2 22333 11037 1554 10619 25847 29991;29992 29991 2 KLLSAEER Unmodified 944.5291 0.52909508 410;3398 A0A338P6R8;A0A338P769;A0A338P755;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 1 7 0 1 41.932 41.932 3 0.04892 10736 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.982 14.63 147.28 124.9 208.6 160.26 0 207.87 139 130 207 158 0 195 1 1 1 1 0 1 16490 11038 410;3398 10620 25848 29993 29993 1 KLLSHGK Unmodified 781.48102 0.48102268 1570 P47911 Rpl6 60S ribosomal protein L6 yes yes 0 0 0 1 12 0 1 37.067 37.067 4 0.02912 5629 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.495 13.791 98.61 90.27 121.62 51.705 119.86 95.718 93 93 120 56 120 93 1 1 1 1 1 1 3619.7 11039 1570 10621 25849 29994 29994 1 KLLSLVDDEAFIR Unmodified 1517.8453 0.84534384 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 9 0 1 80.085 80.085 3 0.0016385 27392 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.472 46.639 78.825 63.118 43.463 47.688 0 69.29 74 65 46 46 0 65 1 1 1 1 0 1 5544.5 11040 2555 10622 25850 29995 29995 1 KLLVGTLYQK Unmodified 1161.7121 0.71214483 2144 Q62086 Pon2 Serum paraoxonase/arylesterase 2 yes yes 0 0 0 1 1 0 1 64.348 64.348 3 1.8128E-05 21633 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.961 64.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11041 2144 10623 25851 29996 29996 1 KLLVPGK Unmodified 753.51126 0.51126017 779 D3Z645;Q9QZ88;D3YYD5;D3YW98 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 1 1 0 1 52.086 52.086 3 0.04149 15874 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.915 28.812 0 0 77.211 64.138 122.57 0 0 0 74 65 120 0 0 0 1 1 1 0 9159.4 11042 779 10624 25852 29997 29997 1 KLLVSSEDYGR Unmodified 1265.6616 0.66156582 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9 0.816 1 1 1 49.775 49.775 3 0.00076859 12934 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.114 52.239 317.65 684.75 274.28 411.32 332.71 837.12 299 668 278 397 347 791 2 3 1 2 2 2 90432 11043 551 10625 25853;25854;25855 29998;29999;30000 29999 3 KLMVEPLQNILIR Unmodified 1565.9327 0.93271906 3064 Q9D4H8 Cul2 Cullin-2 yes yes 0 0 0 1 11.5 0.5 1 1 75.865 75.865 3 0.016768 20145 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.704 24.417 29.626 77.638 135.85 0 126.57 0 28 74 130 0 121 0 1 1 2 0 2 0 10934 11044 3064 10626 25856;25857 30001;30002 30002 2 KLNAFGNAFLNR Unmodified 1363.7361 0.73606817 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 1 6.5 5.5 1 1 63 63 3 3.5658E-08 21348 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.7 96.548 458.75 321.57 171.88 231.81 346.32 448.5 430 334 180 224 356 430 2 2 1 1 2 2 85469 11045 3271;3353 10627 25858;25859 30003;30004 30003 2 KLPAAEGVGK Unmodified 968.56548 0.56548059 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 1 9 0 1 45.509 45.509 3 0.0029709 11084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.392 52.634 127.65 0 186.93 137.06 197.98 265.11 120 0 179 139 204 254 1 0 1 1 1 1 9440.7 11046 2790 10628 25860 30005 30005 1 KLPGEVTETEVIALGLPFGK Unmodified 2097.1722 0.17215729 2780 Q91Z31;A0A0G2JGW0;Q3V328 Ptbp2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 1 7 0 1 87.779 87.779 4 0.034911 32375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 30.767 21.72 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 833.57 11047 2780 10629 25861 30006 30006 1 KLPLTTLAQCLVEGSAILGDDTLLGK Unmodified 2725.4936 0.49356778 2060 Q5SSM3 Arhgap44 Rho GTPase-activating protein 44 yes yes 0 0 0 1 11 0 2 107.36 107.36 4 0.00048745 35391 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.908 30.597 0 9.4227 9.1727 0 0 0 0 9 9 0 0 0 0 1 1 0 0 0 3165.3 11048 2060 10630 25862;25863 30007;30008;30009 30008 3 KLPNDFLTSVVDLIGAAK Unmodified 1900.067 0.066963938 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 1 11.3 0.471 2 1 100.99 100.99 4 6.4241E-05 33321 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.209 43.903 63.766 84.045 76.663 25.139 29.288 14.924 60 84 75 23 28 14 2 4 3 1 1 1 9774.2 11049 2339 10631 25864;25865;25866 30010;30011;30012;30013;30014;30015 30011 6 KLPPVLAIQLK Unmodified 1218.8064 0.80637956 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 1 1 0 1 72.626 72.626 3 8.392E-05 24654 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.957 79.558 78.587 52.741 92.344 105.98 0 99.138 74 56 93 102 0 93 1 1 1 1 0 1 5867.8 11050 1813 10632 25867 30016 30016 1 KLPVESIQIVLEELR Unmodified 1765.0349 0.034935528 422 A2A4K0;Q9CQ80;E9PXS9;A8XY17 Vps25 Vacuolar protein-sorting-associated protein 25 yes no 0 0 0 1 9 0 1 91.655 91.655 3 0.0059457 32469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.305 33.425 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 1195.7 11051 422 10633 25868 30017 30017 1 KLPVGFTFSFPCR Unmodified 1554.8017 0.80170489 1055 G3UVV4;P17710;D3YYR4;D3Z365;D3Z105 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 1 5.6 5.64 3 1 1 76.108 76.108 3;4 7.7104E-11 25722 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 117.63 106.62 783.14 824.09 619.26 556.82 584.09 575.38 735 829 610 530 580 546 11 12 8 8 9 9 184580 11052 1055 10634 25869;25870;25871;25872;25873 30018;30019;30020;30021;30022;30023;30024;30025;30026;30027;30028;30029;30030;30031 30019 14 KLQAQMK Unmodified 845.47931 0.47930812 1974;2696;391 Q8VDD5;A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q3UH59;Q61879;Q5SV64 Myh9;Myh11;Myh10 Myosin-9;Myosin-11;Myosin-10 no no 0 0 0 1 11 0 1 40.858 40.858 3 0.015165 8005 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.472 39.478 0 0 0 0 110.64 98.113 0 0 0 0 109 95 0 0 0 0 1 1 5576.7 11053 2696;391;1974 10635 25874 30032 30032 1 KLQEAHLR Unmodified 993.57196 0.57196295 2246 Q6PGE7 Slc6a7 Sodium-dependent proline transporter yes yes 0 0 0 1 8 0 1 34.449 34.449 4 0.020117 6784 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.867 32.537 108.25 109 107.99 112.89 106.27 135.55 102 111 111 111 111 130 1 1 1 1 1 1 5924.9 11054 2246 10636 25875 30033 30033 1 KLQFLFELPSR Unmodified 1376.7816 0.78162138 2011 Q3UVL4 Vps51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 1 12 0 1 76.856 76.856 3 0.02424 20598 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.46 24.521 48.46 64.279 96.525 0 86.818 0 46 65 93 0 83 0 1 1 1 0 1 0 7527.9 11055 2011 10637 25876 30034 30034 1 KLQIGVK Unmodified 784.51707 0.51707383 1550 P45878 Fkbp2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 1 11 0 1 49.364 49.364 3 0.013744 11418 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.55 33.428 564.94 0 630.12 0 0 0 530 0 585 0 0 0 1 0 1 0 0 0 55722 11056 1550 10638 25877 30035 30035 1 KLQLQNQESVR Unmodified 1341.7365 0.7364621 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 1 8.5 0.5 1 1 42.106 42.106 3 1.8456E-05 9629 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.56 80.326 64.08 127.73 56.499 75.417 0 152.44 60 125 56 69 0 143 1 2 1 1 0 2 18101 11057 573 10639 25878;25879 30036;30037 30037 2 KLQQYPR Unmodified 931.52395 0.52395013 1534 P39053 Dnm1 Dynamin-1 yes yes 0 0 0 1 9.5 0.5 1 1 35.483 35.483 3 0.0079039 6195 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.1 70.873 396.05 737.01 714.1 347.44 823.75 798.38 373 729 717 346 829 771 1 2 2 1 2 2 55723 11058 1534 10640 25880;25881 30038;30039 30039 2 KLQSLEQEK Unmodified 1101.603 0.60298831 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 1 7 0 1 49.06 49.06 3 0.034074 14008 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.391 12.606 78.314 71.409 122.39 62.171 83.962 0 74 74 120 65 83 0 1 1 1 1 1 0 5992.1 11059 2255 10641 25882 30040 30040 1 KLQSPIILLYCTK Unmodified 1575.9058 0.90583561 1089 G3X9V4;Q01097;A0A0G2JEA7 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 1 6.5 5.5 1 1 75.577 75.577 3 0.00029122 19572 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.311 76.519 0 68.693 27.962 30.079 46.114 48.516 0 65 28 28 47 46 0 2 1 1 2 1 7052.6 11060 1089 10642 25883;25884 30041;30042 30042 2 KLSDDNTIGQEEIQQR Unmodified 1872.9177 0.91773352 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 4 0 1 48.126 48.126 3 2.9533E-05 15399 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.147 56.658 0 29.5 17.471 29.563 0 0 0 28 19 28 0 0 0 1 1 1 0 0 3764.6 11061 551 10643 25885 30043 30043 1 KLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMER Unmodified 3533.7072 0.70715916 44 A0A0A0MQA5;P68368 Tuba4a Tubulin alpha-4A chain yes no 0 0 0 1 11 0 1 89.904 89.904 4 0.00021117 28696 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.274 23.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3851.1 11062 44 10644 25886 30044 30044 1 KLSLNIPIITGGK Unmodified 1352.8391 0.83913625 1469 P27671 Rasgrf1 Ras-specific guanine nucleotide-releasing factor 1 yes yes 0 0 0 1 1 0 1 74.398 74.398 3 0.0082578 25511 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.377 48.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11063 1469 10645 25887 30045 30045 1 KLSMYGVDLHHAK Unmodified 1497.7762 0.77621842 3345;526;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84;A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb41l3;Epb4.1l3;Epb4.1l1;Epb41l1 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 1 no no 0 0 0 1 10.5 0.5 1 1 50.68 50.68 5 5.2786E-05 11579 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.466 59.039 316.6 140.95 230.8 111.49 212.38 181.56 297 148 222 102 209 176 2 1 1 1 1 1 14982 11064 369;3345;526 10646 25888;25889 30046;30047 30047 2 KLSSAMSAAK Unmodified 992.53247 0.5324659 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 1 10 3.85 1 2 1 1 2 45.688 45.688 2;3;4 4.0922E-09 9714 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.98 85.284 1653.4 2410.5 1834.8 1544.8 1602.9 1985.2 1555 2481 1823 1541 1655 1903 5 7 6 6 5 5 545140 11065 1373 10647 25890;25891;25892;25893;25894;25895;25896 30048;30049;30050;30051;30052;30053;30054;30055;30056 30052 9 KLSTIALALGVER Unmodified 1369.8293 0.82929985 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;G3UXQ1;H3BJ83 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 1 6.5 5.5 1 1 73.886 73.886 3 0.00022066 18654 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.992 57.61 248.58 79.688 0 0 191.36 298.35 232 78 0 0 189 285 2 2 0 0 1 3 38099 11066 2272 10648 25897;25898 30057;30058;30059 30058 3 KLSVSQVVHK Unmodified 1123.6713 0.67134264 174 A0A0R4J0I1;P07759 Serpina3k Serine protease inhibitor A3K yes no 0 0 0 1 10.5 0.5 1 1 46.871 46.871 4 0.0018327 10604 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.595 42.214 0 262.96 372.66 0 113.51 75.645 0 253 359 0 111 74 0 2 2 0 1 1 16942 11067 174 10649 25899;25900 30060;30061 30060 2 KLTDIINNDHENVK Unmodified 1651.8529 0.85294842 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 1 8 0 1 54.27 54.27 4 0.035232 15869 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.836 17.92 69.323 83.638 0 129.26 100.75 0 65 83 0 120 102 0 1 1 0 1 1 0 6557.2 11068 1994 10650 25901 30062 30062 1 KLTEIINTQHENVK Unmodified 1665.905 0.90498399 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 1 8 0 1 53.567 53.567 4 0.00094393 15511 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.549 37.896 79.08 63.828 0 0 93.636 106.06 74 65 0 0 93 102 1 1 0 0 1 1 10576 11069 1368 10651 25902 30063 30063 1 KLTGGANWQPK Unmodified 1198.6459 0.64585618 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 1 11.7 1.25 1 1 1 49.173 49.173 3;4 0.00046419 9948 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.434 45.669 711.8 348.2 720.19 722.86 486.67 835.71 669 360 718 709 511 797 4 3 4 4 3 4 96385 11070 2129 10652 25903;25904;25905 30064;30065;30066;30067 30066 4 KLTGGSNWQPK Unmodified 1214.6408 0.6407708 2280 Q7M6Y3;A0A1L1SUR7;A0A140LHQ8 Picalm Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 1 11 0 1 47.619 47.619 3 0.011861 10630 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.314 22.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7347.7 11071 2280 10653 25906 30068 30068 1 KLTLLAQQK Unmodified 1041.6546 0.65462995 3255 Q9QUJ7 Acsl4 Long-chain-fatty-acid--CoA ligase 4 yes yes 0 0 0 1 6.5 5.5 1 1 55.922 55.922 3 0.0033138 12249 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.037 64.893 60.088 38.394 58.288 0 37.018 108.74 56 37 56 0 37 103 1 1 1 0 1 2 7784.2 11072 3255 10654 25907;25908 30069;30070 30070 2 KLTPGEVYNLATCSSK Unmodified 1766.8873 0.88728501 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 1 9.5 0.5 1 1 64.826 64.826 3 3.5127E-05 18054 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.35 82.436 79.402 0 0 0 74.025 98.399 74 0 0 0 74 93 2 0 0 0 2 1 12929 11073 2160 10655 25909;25910 30071;30072 30072 2 KLTPITYPQGLAMAK Unmodified 1630.9116 0.91164927 1759 Q3TLP8;P63001 Rac1 Ras-related C3 botulinum toxin substrate 1 yes no 0 0 0 1 8.5 4.39 1 1 1 1 66.352 66.352 3 1.3158E-25 16284 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 148.72 129.4 133.54 84.17 27.363 154.27 53.211 216.86 125 88 28 143 55 204 2 2 1 2 2 2 108680 11074 1759 10656 25911;25912;25913;25914 30073;30074;30075;30076 30076 4 KLVAASQAALGL Unmodified 1140.6867 0.68665836 655 CON__P02768-1 yes yes 0 0 0 1 1 0 1 73.034 73.034 3 0.029602 24855 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.706 36.182 20.265 0 20.456 0 0 29.848 19 0 19 0 0 28 1 0 1 0 0 1 1082 + 11075 655 10657 25915 30077 30077 1 KLVDYDSAR Unmodified 1065.5455 0.54547343 1157;90;2210 A0A0G2JEG8;Q7TQF7;S4R2J8;S4R1B8;S4R270;D3Z6Q9;O08539;Q6P1B9 Amph;Bin2;Bin1 Amphiphysin;Bridging integrator 2;Myc box-dependent-interacting protein 1 no no 0 0 0 1 7.5 0.5 1 1 43.272 43.272 3 0.0031118 11423 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.335 59.332 748.08 664.24 846.9 727.82 750.98 885.74 705 685 853 725 779 851 2 2 2 2 2 2 86337 11076 90;1157;2210 10658 25916;25917 30078;30079 30078 2 KLVEEIGWSYTGALNQK Unmodified 1935.0102 0.010177341 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 1 9.4 1.85 2 2 1 75.723 75.723 3;4 5.7809E-07 26020 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.38 85.438 59.663 103.88 37.171 37.885 73.726 86.892 56 102 37 37 75 83 1 2 1 1 2 1 6655.8 11077 644 10659 25918;25919;25920;25921;25922 30080;30081;30082;30083;30084 30081 5 KLVEQLK Unmodified 856.5382 0.53820321 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 0 0 0 1 13 0 1 49.494 49.494 3 0.022045 16021 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.334 8.5099 229.65 148.78 230.26 215.5 248.64 269 216 158 231 214 256 259 1 1 1 1 1 1 48561 11078 1777 10660 25923 30085 30085 1 KLVIIEGDLER Unmodified 1283.7449 0.74490152 782;926;757;209 P21107;A0A0R4J1P2;D3YVR0;D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3;Tpm3-rs7 Tropomyosin alpha-3 chain no no 0 0 0 1 7.5 0.5 1 1 64.455 64.455 3 0.0085777 20578 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.802 24.961 475.06 328.37 308.94 324.67 544.6 581.42 446 334 310 309 554 560 4 3 2 2 4 4 38939 11079 209;757;782;926 10661 25924;25925 30086;30087;30088;30089 30089 4 KLVIIESDLER Unmodified 1313.7555 0.7554662 905;1106;1107;1656;906 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 1 8 0 1 65.233 65.233 3 0.0016334 21045 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.082 38.876 195.8 209.87 276.56 214.96 305.27 204.49 185 214 277 217 308 200 1 1 1 1 1 1 23025 11080 905;906;1106;1107;1656 10662 25926 30090 30090 1 KLVIPSELGYGER Unmodified 1459.8035 0.80347903 1550 P45878 Fkbp2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 1 8.5 0.5 1 1 61.922 61.922 3 0.015516 18684 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.149 32.39 0 48.123 49.138 172.5 86.828 106.25 0 46 51 162 88 102 0 1 1 2 1 2 19940 11081 1550 10663 25927;25928 30091;30092 30092 2 KLVIVGDGACGK Unmodified 1215.6645 0.66454271 3254 Q9QUI0;A0A0A6YXF6;Q62159;H3BL56;A0A0G2JEP8;Q9CR99;A0A0A6YWJ1 Rhoa;Rhoc;4930544G11Rik Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 1 9.5 0.5 1 1 53.765 53.765 3 9.1373E-05 14960 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.231 74.414 163.07 111.97 89.878 181.49 293.51 104.4 153 111 93 176 292 102 2 1 1 2 2 1 17108 11082 3254 10664 25929;25930 30093;30094 30093 2 KLVLYLEHNLEK Unmodified 1497.8555 0.8555146 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 1 10.5 0.5 1 1 72.61 72.61 4 9.5716E-05 20769 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.506 55.178 187.49 179.22 127.17 363.41 208.01 134.47 176 176 130 343 213 130 2 2 1 3 2 1 29055 11083 859 10665 25931;25932 30095;30096;30097 30097 3 KLVNTVNPGAR Unmodified 1167.6724 0.67240528 3168 Q9EPU0 Upf1 Regulator of nonsense transcripts 1 yes yes 0 0 0 1 10.5 0.5 1 1 41.756 41.756 3 0.0012058 8263 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.522 67.895 69.522 44.256 0 48.864 75.159 0 65 46 0 46 74 0 1 1 0 1 1 0 15072 11084 3168 10666 25933;25934 30098;30099 30099 2 KLVSIVAEQLEK Unmodified 1355.8024 0.8024164 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 1 11 0 1 75.366 75.366 3 0.0070206 22423 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.094 31.896 0 0 85.505 96.553 0 0 0 0 83 93 0 0 0 0 1 1 0 0 6084.4 11085 2543 10667 25935 30100 30100 1 KLVTDEK Unmodified 831.47018 0.47018322 2036;3055 Q561M1;Q9D358;A0A1W2P7X3 Acp1 Low molecular weight phosphotyrosine protein phosphatase no no 0 0 0 1 8 0 1 42.031 42.031 3 0.01371 10153 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.819 28.137 273.24 214.8 242.17 0 264.54 277.07 257 223 237 0 262 267 1 1 1 0 1 1 12493 11086 2036;3055 10668 25936 30101 30101 1 KLVWIPSER Unmodified 1126.6499 0.64987892 1974 Q3UH59;Q61879;Q5SV64;Q8BXF2 Myh10 Myosin-10 yes no 0 0 0 1 11 0 1 58.602 58.602 3 0.00037469 15039 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.67 85.452 253.43 0 326.01 231.02 282.27 0 238 0 312 234 280 0 1 0 1 1 1 0 31481 11087 1974 10669 25937 30102 30102 1 KLVWVPSSK Unmodified 1042.6175 0.61751616 2696 Q8VDD5;F2Z494 Myh9 Myosin-9 yes no 0 0 0 1 6.5 5.5 1 1 59.262 59.262 3 0.0033599 13587 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.741 41.437 88.236 170.16 94.188 105.47 167.43 222.28 83 167 93 103 172 213 1 2 1 2 3 3 37698 11088 2696 10670 25938;25939 30103;30104;30105 30105 3 KLYNIAAPSR Unmodified 1131.64 0.64004252 2865 Q99LR1 Abhd12 Monoacylglycerol lipase ABHD12 yes yes 0 0 0 1 11 0 1 47.596 47.596 3 0.0024663 10613 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.062 57.224 0 0 0 144 0 0 0 0 0 144 0 0 0 0 0 1 0 0 13091 11089 2865 10671 25940 30106 30106 1 KLYSAVPGR Unmodified 989.56581 0.56581494 732;2343 D3YZU5;D3YZU4;D3YZU1;Q80Z38;D3Z5K8;A0A1L1SQP7 Shank1;Shank2 SH3 and multiple ankyrin repeat domains protein 1;SH3 and multiple ankyrin repeat domains protein 2 no no 0 0 0 1 11 0 1 43.1 43.1 3 0.046791 8942 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.284 23.169 0 0 0 202.2 0 191.88 0 0 0 185 0 180 0 0 0 1 0 1 11491 11090 732;2343 10672 25941 30107 30107 1 KLYYQQLK Unmodified 1082.6124 0.61243078 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 1 11 0 1 51.436 51.436 3 0.0045425 12210 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.6 68.654 179.19 0 0 131.16 0 213.2 167 0 0 120 0 200 1 0 0 1 0 1 16615 11091 848 10673 25942 30108 30108 1 KMDELGSK Unmodified 906.44807 0.44806757 2086 Q60771 Cldn11 Claudin-11 yes yes 0 0 0 1 8.67 3.09 1 1 1 45.218 45.218 3 0.027153 13360 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 15.411 343.15 140.56 441.35 552.32 965.21 608.7 322 139 426 546 967 582 2 1 2 3 3 2 60480 11092 2086 10674 25943;25944;25945 30109;30110;30111 30111 3 KMDESEANEAPAGEAAAR Unmodified 1845.8163 0.81630491 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 3 0 1 39.852 39.852 3 0.0015697 11986 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.612 29.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11093 2028 10675 25946 30112 30112 1 KMDVGGLSDPYVK Unmodified 1407.7068 0.70680145 1553;223 A0A0R4J2C2;P46097;P46096;Q9R0N5 Syt2;Syt1;Syt5 Synaptotagmin-2;Synaptotagmin-1;Synaptotagmin-5 no no 0 0 0 1 7.5 0.5 1 1 59.556 59.556 3;4 0.00040108 19130 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.344 51.604 197.44 79.146 111.13 152.13 160.05 222.49 185 83 111 148 167 213 2 1 1 2 2 2 17114 11094 223;1553 10676 25947;25948 30113;30114 30113 2 KMFESFIESVPLFK Unmodified 1700.8848 0.88476582 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 1 12 0 1 95.298 95.298 3 0.0029905 27357 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.185 39.607 14.893 8.3281 14.573 0 23.569 14.251 14 9 14 0 23 14 1 1 1 0 1 1 590.39 11095 68 10677 25949 30115 30115 1 KMNLGVGAYR Unmodified 1107.5859 0.58589846 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 11 0.816 1 1 1 47.893 47.893 3 0.001807 10640 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.099 53.77 304.52 0 733.66 522.72 392.33 346.45 285 0 701 525 390 325 1 0 2 2 1 1 108800 11096 1312 10678 25950;25951;25952 30116;30117;30118 30117 3 KMPQYQK Unmodified 921.47422 0.47422274 1160 O08599;F8WGM5;Q64324 Stxbp1;Stxbp2 Syntaxin-binding protein 1;Syntaxin-binding protein 2 yes no 0 0 0 1 10.5 0.5 1 1 40.788 40.788 3 0.0097745 8117 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.24 61.156 1084.8 895.69 1237 1208.1 1351.7 1691.5 1021 930 1235 1196 1385 1623 1 2 1 1 1 2 95809 11097 1160 10679 25953;25954 30119;30120 30119 2 KMSSELFTLTYGALVTQLCK Unmodified 2289.1749 0.17487618 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 1 12 0 1 95.545 95.545 4 0.0091209 27435 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 36.207 21.278 0 5.1624 9.4283 0 0 0 0 5 9 0 0 0 0 1 1 0 0 0 778.13 11098 1227 10680 25955 30121 30121 1 KNDEVSSLDAFLDLIR Deamidation (N) 1834.9313 0.93125832 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 1 0 1 6.67 0.471 1 2 93.66 93.66 3;4 0.001449 35430 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.522 32.782 9.5635 28.522 37.371 20.275 9 0 9 28 37 19 9 0 1 2 2 1 1 0 10373 11099 502;1544 10681 25956;25957;25958 30122;30123;30124 30122 128 3 KNDEVSSLDAFLDLIR Unmodified 1833.9472 0.94724273 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 1 10.2 2.77 1 1 2 88.631 88.631 3;4 1.5115E-07 34776 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.26 69.918 351.45 46.86 277 159.83 290.53 29.848 329 47 264 157 283 28 3 2 3 2 3 1 50439 11100 502;1544 10681 25959;25960;25961;25962 30125;30126;30127;30128 30127 4 KNFATSLYSMIK Unmodified 1401.7326 0.73262227 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 1 1 0 1 76.111 76.111 3 0.0016632 26150 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.727 37.186 39.564 27.124 0 29.737 46.1 18.939 37 28 0 28 46 19 1 1 0 1 1 1 2181.5 11101 1577 10682 25963 30129 30129 1 KNGGLGHMNITLLSDITK Deamidation (N) 1912.0088 0.0087971324 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 1 0 1 9 0 1 72.594 72.594 4 0.0019264 23875 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.68 29.084 0 0 122.47 165.39 0 127.92 0 0 120 158 0 120 0 0 1 1 0 1 9861.3 11102 1422 10683 25964 30130 30130 522 1 KNHLEGK Unmodified 824.45045 0.45045083 3146 Q9DCL9;D3Z6P1;D6RCU8 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes no 0 0 0 1 8 0 1 33.473 33.473 4 0.02622 6316 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.205 19.663 59.213 63.609 93.216 73.978 71.696 67.244 56 65 93 74 74 65 1 1 1 1 1 1 2528.5 11103 3146 10684 25965 30131 30131 1 KNIDSNPYDTDK Unmodified 1408.647 0.64703797 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 1 6.5 0.5 1 1 45.391 45.391 3 1.356E-05 13253 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.531 50.616 88.097 71.1 101.45 94.475 105.97 107.02 83 74 102 93 111 102 1 1 1 1 2 1 11384 11104 1554 10685 25966;25967 30132;30133 30132 2 KNLEAQHK Unmodified 966.52468 0.52467841 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 8 0 1 33.137 33.137 4 0.014226 6234 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.96 25.829 128.41 70.078 0 90.719 0 69.29 120 74 0 83 0 65 1 1 0 1 0 1 4471.5 11105 879 10686 25968 30134 30134 1 KNLEQISANITK Unmodified 1357.7565 0.75652884 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 1 8 0 1 56.774 56.774 3 1.2904E-05 17104 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.942 77.691 78.984 82.986 0 79.018 99.096 115.5 74 83 0 74 102 111 1 1 0 1 1 1 9741.3 11106 1568 10687 25969 30135 30135 1 KNNPEPWNK Unmodified 1125.5567 0.55670682 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 1 9.33 2.62 1 1 1 44.465 44.465 3 0.00035245 11467 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.91 86.579 562.75 201.82 646.85 664.52 275.98 676.5 529 212 639 648 286 642 3 1 3 3 1 3 89440 11107 2157 10688 25970;25971;25972 30136;30137;30138 30137 3 KNPANPR Unmodified 795.43514 0.43513512 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 8.5 0.5 1 1 25.001 25.001 3 0.010165 3623 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.22 63.105 239.9 89.939 0 100.44 196.46 175.61 224 93 0 93 198 170 2 1 0 1 2 2 14580 11108 2727 10689 25973;25974 30139;30140 30140 2 KNPDSQYGELIEK Unmodified 1519.7518 0.75183739 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 1 5.5 0.5 1 1 54.331 54.331 3 0.0002165 18188 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.619 46.316 137.03 117.27 133.69 201.57 133.18 85.949 129 121 139 194 139 83 2 2 2 2 2 1 16996 11109 3130 10690 25975;25976 30141;30142 30141 2 KNPGIAAK Unmodified 797.47594 0.4759373 1012 F7AA26;A2API8;O54931 Pakap;Akap2 A-kinase anchor protein 2 yes no 0 0 0 1 10 0 1 37.954 37.954 3 0.0055385 7038 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.741 49.613 99.179 120.99 0 0 104.08 75.914 93 120 0 0 102 74 1 1 0 0 1 1 3336.6 11110 1012 10691 25977 30143 30143 1 KNPMALYILK Unmodified 1189.6893 0.68930089 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 1 12 0 1 67.658 67.658 3 0.0028861 16891 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.841 40.463 349.4 264.75 383.78 0 299.64 320.84 329 277 371 0 297 309 1 1 1 0 1 1 24611 11111 2167 10692 25978 30144 30144 1 KNPPSAR Unmodified 768.42424 0.42423608 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 1 8.5 0.5 1 1 25.805 25.805 3 0.019414 3793 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.809 3.0352 269.82 378.52 136.89 401.93 337.22 367.74 254 375 148 381 340 354 3 3 2 3 2 3 18462 11112 2243 10693 25979;25980 30145;30146;30147 30145 3 KNPQAVLDVLEFYNSK Unmodified 1863.9731 0.97306355 1099 G5E884;O88643;S4R2K7 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 1 11 1.41 2 1 80.301 80.301 3;4 4.1424E-05 25233 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.354 58.862 167.22 27.776 184.32 121.6 191.08 182.16 157 28 176 120 194 176 3 1 2 1 2 2 32951 11113 1099 10694 25981;25982;25983 30148;30149;30150 30148 3 KNPQAVLDVLK Unmodified 1223.7238 0.72377215 2106;2556 Q8CIN4;Q61036;A3KGC5;A3KGC4;A3KGC3 Pak2;Pak3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Serine/threonine-protein kinase PAK 3 no no 0 0 0 1 13 0 1 63.385 63.385 3 0.0013115 22872 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.964 46.358 0 77.179 93.129 64.34 61.36 106.98 0 74 93 65 65 102 0 1 1 1 1 1 7942.1 11114 2556;2106 10695 25984 30151 30151 1 KNQMQIASTLLNYGAETNTVTK Unmodified 2424.2319 0.23187379 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 1 10 0 1 71.939 71.939 4 2.6432E-13 21439 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.467 58.113 0 58.501 64.782 45.76 34.95 48.039 0 56 65 46 37 46 0 1 1 1 1 1 7528.9 11115 3449;3451;3452 10696 25985 30152 30152 1 KNQTLQK Unmodified 858.49232 0.49231565 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 1 9.67 0.943 2 1 35.128 35.128 3;4 0.023201 6848 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.732 34.486 596.09 667.44 59.293 529.5 744.87 743.07 559 666 60 495 757 717 3 3 1 1 2 3 47486 11116 2186;2148 10697 25986;25987;25988 30153;30154;30155 30153 3 KNSVVEASEAAYK Unmodified 1394.7042 0.70415892 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 1 9.33 2.62 1 1 1 48.902 48.902 3 1.5424E-18 14491 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.47 104.75 207.21 149.5 213.91 146.9 170.48 78.884 195 157 213 149 167 74 2 2 2 2 1 1 17536 11117 1797 10698 25989;25990;25991 30156;30157;30158 30156 3 KNTLNPYYNESFSFEVPFEQIQK Unmodified 2821.3599 0.35991107 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 1 7.67 0.471 1 2 82.002 82.002 3;4 2.797E-08 29625 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.345 43.401 29.642 36.76 105.49 56.603 37.428 29.848 28 37 102 56 37 28 1 1 3 2 1 1 12668 11118 1553 10699 25992;25993;25994 30159;30160;30161;30162 30159 4 KNVAGDGVNR Unmodified 1028.5363 0.53630573 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 7 0 1 31.494 31.494 3 0.0020698 6053 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.16 47.782 59.91 35.328 0 0 77.404 0 56 37 0 0 74 0 1 1 0 0 1 0 4264.9 11119 1561 10700 25995 30163 30163 1 KPAAAAGAK Unmodified 783.46029 0.46028724 1546 P43274;P43277 Hist1h1e;Hist1h1d Histone H1.4;Histone H1.3 yes no 0 0 0 1 9.5 0.5 1 1 33.922 33.922 3 0.0048258 6245 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.064 37.761 152.98 135.2 142.63 72.109 155.08 47.829 144 139 143 74 153 46 2 2 2 1 2 1 6015.4 11120 1546 10701 25996;25997 30164;30165 30164 2 KPAAGLSAAPVPPAAAPLLDFSSDSVPPAPR Unmodified 2966.5866 0.58655697 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 1 8.5 0.5 2 2 78.811 78.811 4;5 3.7595E-05 26805 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.709 34.944 159.7 35.018 78.072 156.02 266.78 194.39 149 38 74 149 269 187 4 2 1 4 6 4 20455 11121 2886 10702 25998;25999;26000;26001 30166;30167;30168;30169;30170;30171;30172 30172 7 KPAATGTFGVR Unmodified 1103.6087 0.60874239 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 1 10 0 1 42.393 42.393 3 0.0017186 8723 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.524 52.047 88.265 52.141 89.209 54.64 66.508 91.91 83 56 88 56 69 88 1 1 1 1 1 1 5017.4 11122 48 10703 26002 30173 30173 1 KPADLQNLAPGTHPPFITFNSEVK Unmodified 2620.3649 0.36493687 3273 Q9QYB1 Clic4 Chloride intracellular channel protein 4 yes yes 0 0 0 1 9 0 1 69.585 69.585 4 0.0029863 22433 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.369 25.581 39.2 45.538 45.648 26.805 57.345 0 37 46 46 28 56 0 1 1 1 1 1 0 5309.8 11123 3273 10704 26003 30174 30174 1 KPAETNLR Unmodified 927.51378 0.51377937 1383 P15105;D3YVK1 Glul Glutamine synthetase yes no 0 0 0 1 9.25 2.28 1 1 1 1 33.473 33.473 3 0.011979 6943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.17 48.287 448.52 316.81 1307.7 430.66 1054.4 738.52 422 320 1246 443 1039 706 2 1 4 2 3 3 515730 11124 1383 10705 26004;26005;26006;26007 30175;30176;30177;30178 30175 4 KPALELLGYLK Unmodified 1243.754 0.75400964 1062 G3UWZ6;G3X9M0;Q9ER88;G3UYM6;G3UWR5;G3UWJ4;G3UZC0;A0A0R4J1B9 Dap3 28S ribosomal protein S29, mitochondrial yes no 0 0 0 1 11 0 1 78.427 78.427 3 0.0020132 23812 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.451 54.575 59.51 0 97.059 73.331 93.909 0 56 0 93 74 93 0 1 0 1 1 1 0 4668.8 11125 1062 10706 26008 30179 30179 1 KPASGTLDVSLNR Unmodified 1356.7361 0.73612775 2678 Q8VBV7;A0A087WPM5 Cops8 COP9 signalosome complex subunit 8 yes no 0 0 0 1 7.5 0.5 1 1 48.555 48.555 3 0.00024148 13107 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.856 56.521 87.847 169.92 110.26 122.04 193.36 115.21 83 167 111 121 194 111 1 2 1 2 2 1 18101 11126 2678 10707 26009;26010 30180;30181 30181 2 KPAVVAK Unmodified 711.46431 0.46430998 1247 O70251;A0A087WS46 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 1 11 0.816 1 1 1 40.284 40.284 3 0.012048 7702 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.77 44.962 379.29 253.37 758.12 789.83 350.71 690.35 357 263 749 770 363 657 2 1 3 3 1 2 136190 11127 1247 10708 26011;26012;26013 30182;30183;30184 30183 3 KPDGSTVTQR Unmodified 1087.5622 0.56218613 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 7.5 0.5 1 1 31.935 31.935 3 0.0018708 6264 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.555 34.165 312.92 204.31 73.115 93.87 386.91 212.82 293 213 77 93 381 210 2 2 1 1 2 2 32170 11128 2587 10709 26014;26015 30185;30186 30185 2 KPDPNIK Unmodified 810.45995 0.45995289 282 Q6PDL0;A0A1D5RM94;A0A1D5RMC1 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 1 8 0 1 40.618 40.618 3 0.06 9500 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.2 29.979 0 108.53 0 0 129.99 174.31 0 102 0 0 130 167 0 1 0 0 1 1 7527.4 11129 282 10710 26016 30187 30187 1 KPEENPASK Unmodified 998.50327 0.50327426 2377 Q8BGD9 Eif4b Eukaryotic translation initiation factor 4B yes yes 0 0 0 1 5.5 0.5 1 1 36.003 36.003 3 0.0063533 8676 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.289 42.214 157.62 46.356 160.51 129.99 134.54 193.37 148 46 157 130 139 185 2 1 2 2 1 1 13040 11130 2377 10711 26017;26018 30188;30189 30189 2 KPEFINCQSK Unmodified 1249.6125 0.61250714 1945 Q3TYA4;Q8R3T5 Stxbp6 Syntaxin-binding protein 6 yes no 0 0 0 1 9 0 1 47.681 47.681 3 0.0090698 12040 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.258 31.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11131 1945 10712 26019 30190 30190 1 KPEIAQVIASYAATGPEQLTLAPGQLILIR Unmodified 3160.786 0.78598506 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5 Itsn1 Intersectin-1 yes no 0 0 0 1 11 0.707 1 2 1 98.118 98.118 4;5 1.3903E-08 28008 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.688 52.201 9.657 0 22.931 40.361 6.276 86.442 9 0 22 38 6 84 1 0 2 2 1 2 12306 11132 876 10713 26020;26021;26022;26023 30191;30192;30193;30194 30194 4 KPFGEHWR Unmodified 1055.5301 0.53009814 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 1 11.5 1.5 1 1 41.129 41.129 4 0.006402 8497 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.825 41.651 59.76 141.27 155.57 0 75.098 235.58 56 139 148 0 74 223 1 2 1 0 1 2 17242 11133 2597 10714 26024;26025 30195;30196 30195 2 KPFLLGPQR Unmodified 1054.6287 0.62874955 1056 G3UW57;G3XA57 Rab11fip2 Rab11 family-interacting protein 2 yes no 0 0 0 1 6.5 5.5 1 1 53.526 53.526 3 0.011377 11434 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.969 39.591 98.577 103.56 218 129.21 109.97 147.17 93 107 213 132 111 141 1 2 2 2 1 2 11956 11134 1056 10715 26026;26027 30197;30198 30198 2 KPFLQQFYSQTVSTASELR Unmodified 2229.143 0.14298243 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 1 11.5 0.5 1 1 76.712 76.712 3;4 6.2068E-05 23023 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.034 44.442 30.044 0 0 46 19.874 0 28 0 0 46 19 0 1 0 0 1 1 0 9883.7 11135 2554 10716 26028;26029 30199;30200 30199 2 KPFPDFVYK Unmodified 1139.6015 0.60153174 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 1 10.7 1.49 2 1 1 1 1 64.716 64.716 2;3;4 0.00040061 15767 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 116.23 79.708 9506.2 8868.8 6886.5 11284 13824 7454.5 8935 9037 6945 10936 13911 7222 5 7 6 8 7 6 1441200 11136 1158 10717 26030;26031;26032;26033;26034;26035 30201;30202;30203;30204;30205;30206;30207;30208;30209 30208 9 KPFPEHLYQR Unmodified 1313.6881 0.68805534 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 10 2.16 1 1 1 44.289 44.289 4 0.00090581 11541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.843 53.239 1033.6 949.3 1067.9 1034.8 556.1 1406.2 971 934 1057 997 572 1334 3 3 3 3 2 4 159270 11137 1850;2212 10718 26036;26037;26038 30210;30211;30212;30213 30210 4 KPFPINHGK Unmodified 1036.5818 0.58179936 3226 Q9JKB1;A0A2I3BQ39 Uchl3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 0 0 0 1 10.5 0.5 1 1 41.255 41.255 4 0.0019448 8086 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.684 48.565 313.99 215.37 425.39 401.7 481.54 548.04 296 229 417 399 496 527 1 1 1 2 2 2 44356 11138 3226 10719 26039;26040 30214;30215 30215 2 KPFVYTQGQAVLNR Unmodified 1619.8784 0.87837531 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 1 11.5 0.5 1 1 54.805 54.805 3 0.00012585 13448 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.908 65.022 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 8200.9 11139 2686 10720 26041;26042 30216;30217 30216 2 KPFYLYTGR Unmodified 1143.6077 0.60767976 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 1 12 0 1 55.591 55.591 3 0.0017852 12368 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.263 70.08 243.96 440.6 282.96 313.73 379.8 338.81 231 434 300 309 388 328 1 1 1 1 1 1 48419 11140 1506 10721 26043 30218 30218 1 KPGLSQTPSPPHPQLR Unmodified 1738.9479 0.94785186 641 B9EJA2;F6Q1W8 Cttnbp2 Cortactin-binding protein 2 yes no 0 0 0 1 10 0 1 43.978 43.978 4 0.040055 9319 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.341 21.285 0 29.792 0 20.094 35.764 58.675 0 28 0 19 37 56 0 1 0 1 1 1 2764.9 11141 641 10722 26044 30219 30219 1 KPGNNEGSGAPSPLSK Unmodified 1538.7689 0.76888444 2129 Q61548 Snap91 Clathrin coat assembly protein AP180 yes yes 0 0 0 1 9.67 2.49 1 1 1 44.204 44.204 3 0.00036125 13094 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.278 45.594 0 0 138.56 47.153 132.77 0 0 0 130 46 129 0 0 0 2 1 2 0 12573 11142 2129 10723 26045;26046;26047 30220;30221;30222 30222 3 KPGNNEGSGAPSPLSK Deamidation (N) 1539.7529 0.75290002 2129 Q61548 Snap91 Clathrin coat assembly protein AP180 yes yes 0 1 0 1 9.33 2.62 1 1 1 46.22 46.22 3 1.6814E-12 14084 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.453 55.841 69.071 133.66 0 81.975 0 0 65 130 0 75 0 0 2 2 0 2 0 0 11239 11143 2129 10723 26048;26049;26050 30223;30224;30225 30225 825;826 3 KPGSAGGPK Unmodified 797.43955 0.43955179 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22;Q8BSE7;A0A1L1SRY3 Clasp2 CLIP-associating protein 2 yes no 0 0 0 1 9 0 1 32.942 32.942 3 0.011003 5888 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.624 21.515 118.16 99.307 75.022 184.75 167.24 0 111 102 83 176 168 0 1 1 1 1 1 0 5483.9 11144 934 10724 26051 30226 30226 1 KPIDYTILDDIGHGVK Unmodified 1782.9516 0.95159983 18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WR90;A0A087WNT3 Abi2 Abl interactor 2 yes no 0 0 0 1 7.5 0.5 1 1 70.186 70.186 4 8.6446E-06 23275 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.463 55.624 163.24 145.92 32.825 88.435 121.46 44.772 153 148 32 83 120 42 2 2 1 1 1 1 14760 11145 18 10725 26052;26053 30227;30228 30228 2 KPIDYTVLDDVGHGVK Unmodified 1754.9203 0.9202997 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 0 0 0 1 7 0 1 62.959 62.959 4 3.2759E-05 20661 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.153 66.718 0 115.79 138.52 110.7 125.93 144.58 0 111 139 111 130 139 0 1 1 1 1 1 10694 11146 634 10726 26054 30229 30229 1 KPIGLCCIAPVLAAK Unmodified 1609.9048 0.90478975 3037 Q9D172;A0A1W2P870 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 1 6.5 5.5 1 1 71.761 71.761 3 4.4871E-05 24421 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.759 58.842 147.59 212.96 378.35 190.11 341.81 239.77 139 213 370 195 343 232 2 3 4 3 4 3 92732 11147 3037 10727 26055;26056 30230;30231;30232;30233 30230 4 KPIPLLSVVVVNSQLQK Deamidation (N) 1862.1241 0.12408489 2007 Q3UUI3 Them4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 1 0 1 11 0 1 79.447 79.447 4 0.0047558 24400 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.454 39.734 0 0 40.034 0 46.807 38.106 0 0 37 0 46 37 0 0 1 0 1 1 2647.6 11148 2007 10728 26057 30234 30234 798 1 KPLDDTLALAPLFGPPLESAFDEQK Unmodified 2711.4058 0.40579863 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 1 9.33 2.62 1 1 1 95.22 95.22 4 1.9168E-11 34479 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.197 52.763 19 29.468 19.365 40.127 57.218 77.251 19 28 19 37 59 74 1 2 1 1 3 3 8120.5 11149 2691;1024 10729 26058;26059;26060 30235;30236;30237;30238 30236 4 KPLEALYGYDYLAK Unmodified 1642.8607 0.86065956 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 1 11 2 1 1 73.595 73.595 3;4 0.00032184 27589 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.507 61.699 88.59 92.978 0 131.16 0 49.036 83 93 0 120 0 46 1 1 0 2 0 1 17539 11150 2636 10730 26061;26062 30239;30240 30240 2 KPLHYAADCGQLEILEFLLLK Unmodified 2470.3294 0.32940299 1738 P62774;A0A0J9YV46 Mtpn Myotrophin yes no 0 0 0 1 13 0 1 96.812 96.812 4 3.018E-07 38884 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.265 49.805 39.411 0 48.778 17.86 0 49.036 37 0 46 19 0 46 1 0 1 1 0 1 2323.3 11151 1738 10731 26063 30241 30241 1 KPLIVFTPK Unmodified 1041.6587 0.65865269 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 1 7.8 5.56 2 2 1 62.884 62.884 3;4 0.0011279 15218 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.015 76.744 1770 1211.8 1755.5 1022.2 1091.3 1766.1 1665 1260 1740 1040 1141 1686 8 7 8 6 6 7 372580 11152 628;2074 10732 26064;26065;26066;26067;26068 30242;30243;30244;30245;30246;30247;30248;30249 30247 8 KPLLESGTLGTK Unmodified 1242.7184 0.71835242 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 1 9.4 1.02 1 2 1 1 55.106 55.106 2;3 8.7878E-05 13726 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.624 56.677 1159.8 362.38 608.63 0 1087.7 1168 1086 377 583 0 1064 1124 5 3 3 0 3 4 173300 11153 1876 10733 26069;26070;26071;26072;26073 30250;30251;30252;30253;30254 30253 5 KPLLPSLTLPYPPTGLDTSPGESER Unmodified 2664.401 0.40104761 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 1 10 0 1 79.612 79.612 3 0.0081982 24835 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.32 32.333 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 3136.7 11154 896 10734 26074 30255 30255 1 KPLPDHVSIVEPK Unmodified 1457.8242 0.82421447 1755 P62908 Rps3 40S ribosomal protein S3 yes yes 0 0 0 1 7.5 0.5 1 1 52.816 52.816 4 0.00049991 15039 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.533 52.375 217.31 287.41 197.9 375.95 421.11 210.03 204 287 204 362 426 204 2 3 2 3 3 2 17100 11155 1755 10735 26075;26076 30256;30257;30258 30258 3 KPLVIIAEDVDGEALSTLVLNR Unmodified 2364.3264 0.3264261 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 8.53 1.86 4 7 2 2 101.24 101.24 3;4 6.8465E-15 35740 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.44 72.62 75.188 102.35 135.94 83.039 48.352 118.04 71 102 133 78 49 113 4 7 7 5 3 7 36274 11156 1766 10736 26077;26078;26079;26080;26081;26082;26083;26084;26085;26086;26087;26088;26089;26090;26091 30259;30260;30261;30262;30263;30264;30265;30266;30267;30268;30269;30270;30271;30272;30273;30274;30275;30276;30277 30265 19 KPLYHYGR Unmodified 1032.5505 0.55049923 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;J3QM71 Mink1 Misshapen-like kinase 1 yes no 0 0 0 1 10 0 1 35.622 35.622 4 0.054654 6201 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.575 17.24 147.84 96.252 138.01 131.79 110.05 0 139 102 139 130 111 0 1 1 1 1 1 0 5503 11157 1081 10737 26092 30278 30278 1 KPMVVLGSSALQR Unmodified 1384.7861 0.78605483 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 1 6.5 5.5 1 1 56.404 56.404 3 1.9034E-27 12562 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 174.72 136.13 708.46 558.9 561.3 508.73 578.12 668.94 666 579 574 506 597 643 2 2 2 2 2 2 133090 11158 2736 10738 26093;26094 30279;30280 30280 2 KPNDIETFK Unmodified 1090.5659 0.56587452 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 1 7 1 1 1 50.601 50.601 3 0.012799 14175 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.213 24.148 158.26 107.43 0 116.73 244.08 198.77 148 111 0 111 245 193 1 1 0 1 1 1 10119 11159 3210 10739 26095;26096 30281;30282 30282 2 KPNQPYEWISYK Unmodified 1551.7722 0.7721789 735 D3Z041;P41216;A0A1B0GRS8;D3Z457 Acsl1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 1 9 0 1 61.611 61.611 3 0.049902 18660 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.481 22.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11160 735 10740 26097 30283 30283 1 KPNSFVAVSVTTPPQAFWTK Unmodified 2204.163 0.16298959 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 1 11.7 0.471 1 2 74.545 74.545 4;5 2.8584E-07 22079 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.866 49.808 29.665 131.91 24.254 99.343 45.769 28.542 28 129 28 93 46 28 1 3 1 2 1 1 14120 11161 677 10741 26098;26099;26100 30284;30285;30286 30284 3 KPPPDGPYVEVVR Unmodified 1451.7773 0.77726428 1445 P24472 Gsta4 Glutathione S-transferase A4 yes yes 0 0 0 1 6.5 0.5 1 1 50.219 50.219 3 0.00069549 14583 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.403 40.857 216.53 137.54 281.04 233.8 160.66 168.43 204 139 278 232 158 158 2 1 2 2 1 1 24718 11162 1445 10742 26101;26102 30287;30288 30288 2 KPPPNLFK Unmodified 939.55419 0.55418762 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 1 11 0.816 1 1 1 51.801 51.801 3 0.0021391 12179 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.29 81.569 628.21 406.47 699.93 209.95 335.59 232.6 590 414 681 209 329 222 3 2 4 2 2 2 61603 11163 1155 10743 26103;26104;26105 30289;30290;30291;30292 30290 4 KPPTFGDASVIALELLNSGYEFDEGSIIFNQFK Unmodified 3645.8243 0.82428064 484;2493 A2AKU9;A2AKV2;A2AKV3;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 1 13 0 1 109.63 109.63 5 1.0852E-20 44285 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.28 65.138 12.792 7.5194 7.7822 8.0394 12.802 12.427 12 8 8 8 13 12 1 1 1 1 1 1 1419.8 11164 484;2493 10744 26106 30293 30293 1 KPPVFLK Unmodified 827.52691 0.52691024 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 1 6 5 1 1 54.849 54.849 3 0.036289 13182 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.912 37.555 117.83 448.58 696.01 493.51 728.11 585.78 111 440 689 502 737 569 1 2 2 2 2 2 78227 11165 165 10745 26107;26108 30294;30295 30295 2 KPPVLQPLALPPELSVR Unmodified 1853.1139 0.11385455 2062 Q5SUR0 Pfas Phosphoribosylformylglycinamidine synthase yes yes 0 0 0 1 11 0 1 74.156 74.156 3 5.1002E-06 21939 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.586 65.642 24.516 32.395 0 24.058 57.471 0 23 32 0 23 56 0 1 1 0 1 1 0 5176 11166 2062 10746 26109 30296 30296 1 KPQYDIWGNTVNVASR Unmodified 1846.9326 0.93259572 1839 P84309;P51829 Adcy5;Adcy7 Adenylate cyclase type 5;Adenylate cyclase type 7 yes no 0 0 0 1 9 0 1 60.425 60.425 3 0.0099395 18071 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.764 29.899 0 0 37.895 48.019 0 0 0 0 37 46 0 0 0 0 1 1 0 0 3415.9 11167 1839 10747 26110 30297 30297 1 KPSETQELVQQVLSLATQDSDNPDLR Unmodified 2910.4571 0.45705894 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 1 9.33 2.62 1 1 1 89.979 89.979 4 1.0866E-12 32774 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.112 57.798 60.088 48.61 49.467 59.533 73.683 96.537 56 46 47 57 75 92 1 3 2 3 3 3 30175 11168 3123 10748 26111;26112;26113 30298;30299;30300;30301;30302 30301 5 KPSLVASK Unmodified 828.5069 0.50690308 1631 P56212;E9PXD7;E9Q4B9;E9Q827 Arpp19 cAMP-regulated phosphoprotein 19 yes no 0 0 0 1 12 0 1 44.296 44.296 3 0.021005 8196 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.207 41.47 68.646 81.753 115.45 107.96 112.09 124.72 65 83 116 107 116 120 1 1 1 1 1 1 6032 11169 1631 10749 26114 30303 30303 1 KPTDTASVQNEAK Unmodified 1387.6943 0.69432251 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 1 6 0 1 39.76 39.76 3 1.6519E-13 10547 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.56 97.931 48.74 55.344 57.026 0 0 69.29 46 56 56 0 0 65 1 1 1 0 0 1 6022.4 11170 3336 10750 26115 30304 30304 1 KPTEFIGGVSSTTQSWVQK Unmodified 2079.0637 0.063669474 3345;369 A0A286YDY4;A0A286YCT6;Q9WV92 Epb41l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 9.8 0.748 2 2 1 67.392 67.392 3;4 1.5145E-13 19284 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.46 82.708 305.7 230.21 229.34 259.9 128.71 116.52 287 233 231 250 130 111 4 3 4 4 2 2 73171 11171 369;3345 10751 26116;26117;26118;26119;26120 30305;30306;30307;30308;30309 30307 5 KPTLVAK Unmodified 755.49052 0.49052473 203 A0A0R4J1E2;E9QN08;Q80T06;F6ZFU0;P57776;A0A0R4J1L2;Q91VK2;D3YY68 Eef1d Elongation factor 1-delta yes no 0 0 0 1 11.5 0.5 1 1 44.518 44.518 3 0.01784 8260 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.279 28.504 177.29 416.29 186.73 142.75 186.95 0 167 421 188 144 185 0 1 2 1 1 1 0 63724 11172 203 10752 26121;26122 30310;30311 30311 2 KPTQASITK Unmodified 972.5604 0.56039521 1945 Q3TYA4;B8JJ84;Q8R3T5 Stxbp6 Syntaxin-binding protein 6 yes no 0 0 0 1 9 0 1 40.029 40.029 3 0.046845 8850 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.275 8.7001 99.064 0 121.86 70.769 151.56 0 93 0 116 74 148 0 1 0 1 1 1 0 7398.8 11173 1945 10753 26123 30312 30312 1 KPTTTMIPDVDCLLWAIGR Unmodified 2186.1228 0.12278103 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 1 10 0 1 89.808 89.808 3 0.023679 29072 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.017 10.521 20.387 0 0 49.593 36.424 0 19 0 0 46 37 0 1 0 0 1 1 0 1135.1 11174 1566 10754 26124 30313 30313 1 KPTYCNFCR Unmodified 1244.543 0.54304736 2498 Q91WG7;Q8C413;F2Z409 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 1 10 0 1 41.896 41.896 3 0.012054 8520 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.78 41.079 48.625 55.026 76.521 0 58.576 0 46 56 74 0 56 0 1 1 1 0 1 0 5656.8 11175 2498 10755 26125 30314 30314 1 KPVHPNDHVNK Unmodified 1283.6735 0.67346791 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 1 10 3 1 1 33.593 33.593 5 0.003104 7036 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.426 32.19 99.077 238.18 118.93 324.55 149.97 342.17 93 232 120 306 158 325 1 2 1 2 1 2 15208 11176 1857 10756 26126;26127 30315;30316 30316 2 KPVHPNDHVNK Deamidation (N) 1284.6575 0.65748349 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 1 0 1 8 0 1 34.875 34.875 4 0.040583 6963 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.188 22.631 0 58.752 49.744 42.941 0 88.478 0 56 51 42 0 83 0 1 1 1 0 1 1964.1 11177 1857 10756 26128 30317 30317 751 1 KPVIPVVSSTVLPSTYQIR Unmodified 2083.2041 0.20412612 2693 Q8VD65 Pik3r4 Phosphoinositide 3-kinase regulatory subunit 4 yes yes 0 0 0 1 12 0 1 71.104 71.104 3 0.0049611 18177 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 44.641 40.921 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11178 2693 10757 26129 30318 30318 1 KPVIVFVPSR Unmodified 1140.7019 0.70191449 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 1 12 0 1 58.198 58.198 3 0.0016812 13415 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.171 67.48 179.19 0 0 149.57 241.43 171.13 167 0 0 141 243 167 1 0 0 1 1 1 14296 11179 2216 10758 26130 30319 30319 1 KPVLGQAGTLAVGTEGGLR Unmodified 1823.0265 0.026496107 862 E9PZ88;F8WIE1;Q91W89;E9PYM7 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 1 9 0 1 59.019 59.019 3 1.7853E-08 17441 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.155 70.726 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11180 862 10759 26131 30320 30320 1 KPVQAPR Unmodified 794.47627 0.47627165 2727 Q91V14;A0A076FR46;A0A0J9YU26;A0A0J9YV84 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 9 0 1 31.157 31.157 3 0.018155 5334 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.784 37.092 88.42 0 107.35 57.549 86.78 76.408 83 0 102 60 88 74 1 0 1 1 1 1 3811 11181 2727 10760 26132 30321 30321 1 KPVQSGPLK Unmodified 952.57057 0.57056597 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 1 10.6 1.36 1 2 1 1 41.511 41.511 3;4 0.00065532 8425 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.87 61.008 1792.2 986.1 1966.7 1708.8 1505.8 1551.8 1685 1069 1951 1685 1559 1496 4 4 5 4 4 4 116630 11182 2517 10761 26133;26134;26135;26136;26137 30322;30323;30324;30325;30326 30323 5 KPVTDCVISVPSFFTDAER Unmodified 2167.062 0.061954915 2137 Q61699;D3Z3I9;A0A0J9YTZ7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 1 9.5 2.06 2 1 1 75.304 75.304 3;4 1.1446E-06 25832 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.443 47.55 0 147.9 0 97.977 93.822 136.46 0 139 0 93 93 129 0 3 0 3 2 2 33840 11183 2137 10762 26138;26139;26140;26141 30327;30328;30329;30330;30331 30328 5 KPVVDCVVSVPSFYTDAER Unmodified 2167.062 0.061954915 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 9.25 2.28 1 1 1 1 69.016 69.016 3 7.5689E-08 22984 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.293 71.489 138.39 115.74 326.34 153.69 128.15 97.901 130 111 315 157 129 93 3 2 5 4 2 2 49309 11184 1957 10763 26142;26143;26144;26145 30332;30333;30334;30335;30336 30334 5 KPYCNAHYPK Unmodified 1276.6023 0.6022768 2140;3134 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8;A2A6G6;A2A6G5;E9Q0N6;A2A6G4;Q9DC07 Lasp1;Nebl LIM and SH3 domain protein 1;LIM zinc-binding domain-containing Nebulette no no 0 0 0 1 9 0 1 37.888 37.888 4 0.0047122 7983 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.223 36.666 180.17 231.51 0 234.24 388.73 337.49 169 229 0 221 393 327 1 1 0 1 1 1 20058 11185 2140;3134 10764 26146 30337 30337 1 KPYPDDENLVEVK Unmodified 1544.7722 0.77223848 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 7.5 3.2 1 2 1 56.612 56.612 3;4 5.0112E-05 19135 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.52 62.045 271.7 231.69 285.85 335.46 377.72 278.89 255 231 283 329 385 269 3 3 3 4 4 3 46535 11186 1899 10765 26147;26148;26149;26150 30338;30339;30340;30341 30341 4 KQALQDTLALYK Unmodified 1390.782 0.78201531 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 10.7 0.471 1 2 64.828 64.828 3;4 3.8543E-08 18230 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.43 89.551 226.76 348.64 315.88 410.22 449.61 270.79 213 347 312 399 460 260 2 3 2 3 4 2 63605 11187 2148 10766 26151;26152;26153 30342;30343;30344;30345 30342 4 KQDFPLVK Unmodified 973.55967 0.55966693 1597 P50518 Atp6v1e1 V-type proton ATPase subunit E 1 yes yes 0 0 0 1 8.5 0.5 1 1 54.788 54.788 3;4 0.012097 15247 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.8 19.755 203.11 0 341.7 158.17 212.68 205 195 0 323 167 217 198 2 0 1 1 1 1 80892 11188 1597 10767 26154;26155 30346;30347 30347 2 KQDGAIENR Unmodified 1029.5203 0.52032131 1096 G5E829;A0A1W2P7C7 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 1 6 0.816 1 1 1 29.785 29.785 3 0.018402 5804 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.889 20.597 168.06 202.14 214.57 215.64 279.59 311.82 158 204 217 213 287 300 2 4 3 3 4 4 25926 11189 1096 10768 26156;26157;26158 30348;30349;30350;30351 30349 4 KQEAEWK Unmodified 917.46068 0.46068117 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 1 9.5 3.5 1 1 42.068 42.068 3 0.037794 12116 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.256 34.818 785.26 622.23 223.68 931.3 915 954.61 736 622 218 880 947 920 2 1 1 2 2 2 84515 11190 599;600 10769 26159;26160 30352;30353 30352 2 KQEALVAR Unmodified 913.53451 0.53451481 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 9.33 2.62 1 1 1 35.445 35.445 3 0.016062 7964 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.425 24.076 1340 602.69 1678.1 1006.8 541.5 1562.2 1261 623 1632 983 533 1480 3 2 3 2 1 3 133940 11191 551 10770 26161;26162;26163 30354;30355;30356 30354 3 KQEELETATR Unmodified 1203.6095 0.60953025 2179 Q64521 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial yes yes 0 0 0 1 5 0.816 1 1 1 37.606 37.606 3 0.0010394 10677 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.641 47.98 484.62 384.2 458.32 409.24 150.4 252.61 456 399 464 402 158 241 3 3 3 3 1 2 37261 11192 2179 10771 26164;26165;26166 30357;30358;30359 30357 3 KQELEEICHDLEAR Unmodified 1768.8414 0.84139745 2696 Q8VDD5;A0A2R8VKI5 Myh9 Myosin-9 yes no 0 0 0 1 5 0 1 65.065 65.065 4 0.0013385 23039 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.599 40.2 39.613 17.545 0 0 29.288 0 37 19 0 0 28 0 1 1 0 0 1 0 3365.7 11193 2696 10772 26167 30360 30360 1 KQELEEILHDLESR Unmodified 1737.8897 0.88972785 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 5 0 1 84.843 84.843 4 0.054973 32271 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 32.275 26.791 0 0 0 9.837 0 29.848 0 0 0 9 0 28 0 0 0 1 0 1 576.27 11194 1974 10773 26168 30361 30361 1 KQEQANNPFYIK Unmodified 1478.7518 0.75177781 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 1 9 0 1 53.556 53.556 3 0.00050582 14810 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.326 43.996 0 0 48.137 36.699 46.43 0 0 0 46 37 46 0 0 0 1 1 1 0 4388.5 11195 1220 10774 26169 30362 30362 1 KQETPDEVGSQR Unmodified 1372.6583 0.65827136 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 1 4 0 1 32.996 32.996 3 0.014585 8218 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.659 20.97 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 5384.2 11196 1388 10775 26170 30363 30363 1 KQEVQAWDGEVR Unmodified 1443.7106 0.71064128 1641 Q3U4W8;P56399;D3YYA5 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 7.75 3.11 1 1 1 1 48.395 48.395 3 1.031E-14 14883 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.01 92.631 494.04 332.84 361.7 426.14 429.57 630.54 464 342 363 417 441 603 4 3 3 4 3 4 45836 11197 1641 10776 26171;26172;26173;26174 30364;30365;30366;30367 30367 4 KQFGAPLAR Unmodified 986.56615 0.56614929 180 A0A0R4J0P1;D3YTT4;Q9D7B6 Acad8 Isobutyryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 10 0 1 44.036 44.036 3 0.028451 9372 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.722 30.536 158.11 137.23 0 168.67 214 0 148 139 0 158 212 0 1 1 0 1 1 0 7431.7 11198 180 10777 26175 30368 30368 1 KQFGAQANVIGPWIQTK Unmodified 1885.021 0.021016799 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 11.5 0.5 1 1 68.057 68.057 3 3.9101E-06 19084 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.478 61.962 24.564 66.535 57.969 0 24.058 0 23 65 56 0 23 0 1 2 1 0 1 0 21457 11199 418 10778 26176;26177 30369;30370 30369 2 KQGGLGPMNIPLISDPK Unmodified 1763.9604 0.96039038 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 1 9.67 0.471 1 2 70.348 70.348 3;4 4.8031E-06 22774 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.346 55.48 168.58 43.038 124.28 55.743 179.54 58.155 158 46 120 56 176 56 3 1 2 1 2 1 29765 11200 604 10779 26178;26179;26180 30371;30372;30373 30371 3 KQGGTVVYGGK Unmodified 1092.5928 0.59275797 3122 Q9DBF1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 1 9.5 0.5 1 1 40.106 40.106 3 0.0016877 8898 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.089 35.755 143.86 122.24 63.601 141.94 38.846 137.47 135 125 65 134 42 130 2 2 1 2 1 2 16156 11201 3122 10780 26181;26182 30374;30375 30374 2 KQGLEQFINK Unmodified 1203.6612 0.66117189 1258 Q78ZM0;O70492;D3Z789;D3Z6Z0 Snx3 Sorting nexin-3 yes no 0 0 0 1 11 1.63 1 1 1 58.156 58.156 3 0.0047421 17273 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.548 33.662 157.21 233.66 154.52 229.95 406.69 185.57 148 232 158 223 405 180 1 2 1 2 3 2 24747 11202 1258 10781 26183;26184;26185 30376;30377;30378 30376 3 KQGLLPLTFADPSDYNK Unmodified 1905.9836 0.98362824 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 10.7 1.75 1 1 1 2 2 73.248 73.248 3;4 5.1002E-06 21459 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.586 65.642 610.38 312.38 663.6 492.99 439.7 616.93 574 315 649 482 446 589 7 2 6 6 5 6 111800 11203 2843 10782 26186;26187;26188;26189;26190;26191;26192 30379;30380;30381;30382;30383;30384;30385;30386;30387;30388 30384 10 KQHSAILAAPNPDEK Unmodified 1617.8475 0.84746911 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 1 8.2 2.48 1 2 1 1 44.823 44.823 4;5 0.00057126 11251 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.165 41.842 236.56 335 264.88 395.77 200.89 401.24 222 334 268 380 204 380 3 5 4 5 3 4 38417 11204 1696 10783 26193;26194;26195;26196;26197 30389;30390;30391;30392;30393 30392 5 KQIFGQNFIPPK Unmodified 1415.7925 0.79252041 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 1 12 0 2 63.758 63.758 3;4 0.00012 15557 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.908 57.955 59.671 0 70.029 0 0 0 56 0 65 0 0 0 1 0 1 0 0 0 5882.8 11205 1042 10784 26198;26199 30394;30395 30395 2 KQIQFADDMQEFTK Unmodified 1727.8189 0.8188711 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 1 13 0 1 64.999 64.999 3 0.029613 23599 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.567 32.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11206 2298 10785 26200 30396 30396 1 KQLAQIK Unmodified 827.52289 0.52288749 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 10.5 0.5 1 1 44.556 44.556 3 0.012071 9442 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.72 23.122 403.35 366.79 426.99 1080.9 484.1 421.11 380 377 435 1075 496 408 1 1 1 2 1 1 70624 11207 1875 10786 26201;26202 30397;30398 30398 2 KQLGPGK Unmodified 726.43882 0.43882351 1544;502 A2APL5;A2AQI7;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 1 10.5 0.5 1 1 37.423 37.423 3 0.016587 6769 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.244 50.866 109.45 180 0 90.719 0 78.884 102 180 0 83 0 74 1 1 0 1 0 1 73752 11208 502;1544 10787 26203;26204 30399;30400 30400 2 KQLYNIYAK Unmodified 1139.6339 0.63389451 1273 O88696 Clpp ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 1 12 0 1 54.045 54.045 3 0.0023651 11738 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.136 72.544 68.907 93.272 61.824 57.523 0 88.478 65 93 65 56 0 83 1 1 1 1 0 1 4176.4 11209 1273 10788 26205 30401 30401 1 KQMVIDVLHPGK Unmodified 1363.7646 0.7645911 370 A0A286YEB7;P62849 Rps24 40S ribosomal protein S24 yes no 0 0 0 1 10 0 1 59.573 59.573 4 0.027517 15945 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.577 26.015 0 58.509 64.301 56.538 44.537 28.577 0 56 65 56 46 28 0 1 1 1 1 1 4197.9 11210 370 10789 26206 30402 30402 1 KQNDVFGEADQ Unmodified 1249.5575 0.55749468 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 1 7.67 3.86 1 1 1 48.818 48.818 2;3 0.0093382 15345 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.225 41.96 226.94 217.2 221.77 167.44 225.7 311.23 213 222 222 158 232 298 2 3 2 2 2 2 62535 11211 1595 10790 26207;26208;26209 30403;30404;30405 30405 3 KQNDVFGEADQ Deamidation (N) 1250.5415 0.54151026 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 1 0 1 4 0 1 51.654 51.654 3 0.038113 17069 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.624 58.651 0 88.312 0 0 0 99.138 0 83 0 0 0 93 0 1 0 0 0 1 10700 11212 1595 10790 26210 30406 30406 607 1 KQPSNNLDR Unmodified 1070.5469 0.54687041 2030;1425 P20444;Q4VA93 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 1 8 0 1 29.073 29.073 3 0.0029142 4805 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.288 50.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11213 1425;2030 10791 26211 30407 30407 1 KQQISLATQMVR Unmodified 1401.7762 0.77621842 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 1 10 0 1 52.147 52.147 3 0.0069488 12516 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.199 27.228 88.644 82.335 0 90.719 0 59.696 83 83 0 83 0 56 1 1 0 1 0 1 11523 11214 1825 10792 26212 30408 30408 1 KQQQLSALK Unmodified 1042.6135 0.61349341 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 9.5 0.5 1 1 44.543 44.543 3 0.0051767 9601 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.197 42.842 88.175 81.032 79.843 104.54 116.44 124.6 83 83 83 102 120 120 1 1 1 1 1 1 15377 11215 1974 10793 26213;26214 30409;30410 30410 2 KQQSLEAEEAK Unmodified 1259.6357 0.635745 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 1 8 3.56 1 1 1 40.244 40.244 3 5.8853E-08 10980 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.44 71.96 206.02 286.49 298.3 84.143 273.61 387.68 195 287 296 83 278 371 3 3 3 1 3 3 22838 11216 3267 10794 26215;26216;26217 30411;30412;30413 30412 3 KQSFVLK Unmodified 848.51199 0.51198846 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 1 12 0 1 49.685 49.685 3 0.047812 10131 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.621 14.695 132.47 111.41 184.15 97.408 164.98 0 125 116 181 102 162 0 1 1 1 1 1 0 5954.5 11217 2889 10795 26218 30414 30414 1 KQTALVELLK Unmodified 1141.7071 0.70705945 656 CON__P02769 yes yes 0 0 0 1 11 0 1 65.07 65.07 3 0.030491 17783 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.135 10.545 0 129.81 0 0 116.11 0 0 122 0 0 111 0 0 1 0 0 1 0 7961.9 + 11218 656 10796 26219 30415 30415 1 KQTALVELVK Unmodified 1127.6914 0.69140938 655 CON__P02768-1 yes yes 0 0 0 1 9 0 1 59.48 59.48 3 0.039121 17646 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.448 20.545 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 2624.8 + 11219 655 10797 26220 30416 30416 1 KQTIENSQGAYQEAFDISK Unmodified 2156.0386 0.038576936 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 6 0.707 1 2 1 61.713 61.713 3;4;5 5.0973E-06 21935 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.924 44.325 314.12 308.55 324.79 358.11 386.32 394.06 296 315 324 352 398 380 4 4 3 4 4 4 34876 11220 1005 10798 26221;26222;26223;26224 30417;30418;30419;30420;30421 30417 5 KQVSGPER Unmodified 899.48248 0.48247924 1441 P23927 Cryab Alpha-crystallin B chain yes yes 0 0 0 1 8 0 1 28.138 28.138 3 0.0091219 4473 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.489 38.916 114.8 99.159 97.344 0 116.11 0 108 102 96 0 111 0 1 1 1 0 1 0 6140.4 11221 1441 10799 26225 30422 30422 1 KQVVNIPSFIVR Unmodified 1398.8347 0.83471958 2268 Q6ZWN5 Rps9 40S ribosomal protein S9 yes yes 0 0 0 1 11.5 0.5 1 1 65.607 65.607 3 0.03794 17938 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.511 23.139 0 98.952 0 80.882 74 99.138 0 93 0 74 74 93 0 1 0 1 1 1 33894 11222 2268 10800 26226;26227 30423;30424 30423 2 KQWLQEVK Unmodified 1057.592 0.59202969 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 10.8 1.67 2 1 1 2 55.582 55.582 3;4 0.0034259 14214 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.57 46.177 4244.7 3162.3 5089.5 2649.8 4397.2 4925.2 3996 3315 5008 2670 4470 4738 5 6 7 6 6 7 440740 11223 1312 10801 26228;26229;26230;26231;26232;26233 30425;30426;30427;30428;30429;30430;30431;30432 30428 8 KSADTLWDIQK Unmodified 1303.6772 0.67721588 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 1 7.33 0.471 2 1 61.045 61.045 3;4 0.00051108 19012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.629 14.151 443.1 414.03 559.84 572.29 690.13 642.29 418 426 566 566 706 621 3 3 3 3 3 3 56145 11224 1389 10802 26234;26235;26236 30433;30434;30435 30435 3 KSADTLWGIQK Unmodified 1245.6717 0.67173657 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1 9.5 0.5 1 1 58.699 58.699 3;4 0.0025259 15404 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.118 32.74 236.71 198.81 264.01 215.49 48.116 271.83 223 206 265 209 46 255 2 2 2 1 1 1 18678 11225 1315 10803 26237;26238 30436;30437 30437 2 KSATHFTGR Unmodified 1003.5199 0.51992738 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 1 9 0 1 28.953 28.953 4 0.03517 4594 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.743 17.905 48.637 55.058 74.549 44.24 84.786 0 46 56 74 46 83 0 1 1 1 1 1 0 2426.8 11226 2617 10804 26239 30438 30438 1 KSCCSCCPAGCEK Unmodified 1602.5717 0.57172301 1471 P28184 Mt3 Metallothionein-3 yes yes 0 0 0 1 7 0 1 34.367 34.367 3 0.0009654 7253 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.277 42.411 20.032 0 59.74 16.86 18.422 19.728 19 0 56 19 19 19 1 0 1 1 1 1 2187.3 11227 1471 10805 26240 30439 30439 1 KSDAGISSADAPR Unmodified 1273.6262 0.62624295 563 A9DA50;Q9D1T0 Lingo1 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 yes no 0 0 0 1 6 0 1 36.472 36.472 3 0.030865 8989 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.69 12.505 59.928 0 26.936 68.638 42.625 68.074 56 0 28 65 46 65 1 0 1 1 1 1 4031.1 11228 563 10806 26241 30440 30440 1 KSDGIYIINLK Unmodified 1262.7234 0.72343779 1374 P14206;A0A1L1SUK3 Rpsa 40S ribosomal protein SA yes no 0 0 0 1 9.5 0.5 1 1 65.318 65.318 3;4 1.1992E-05 18320 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.46 62.846 215.79 229.86 145.99 118.72 198.52 99.138 203 232 148 120 195 93 2 2 1 1 1 1 19654 11229 1374 10807 26242;26243 30441;30442 30442 2 KSDIDEIVLVGGSTR Unmodified 1587.8468 0.84680041 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 9.5 3.5 1 1 61.735 61.735 3 0.0008984 21705 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.47 42.244 69.27 182.59 0 200.02 115.97 214.15 65 176 0 185 120 204 1 2 0 2 1 2 17860 11230 1419 10808 26244;26245 30443;30444 30444 2 KSDIYVCMISFAHNVAAQGK Unmodified 2238.0925 0.092543537 2132 Q61598;A0A1Y7VLG4 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 1 11.7 0.471 1 2 76.212 76.212 4;5 1.0359E-10 20307 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.727 63.43 87.904 219.54 173.42 158.41 267.33 116.98 83 214 167 149 259 111 2 4 3 2 4 2 20911 11231 2132 10809 26246;26247;26248 30445;30446;30447;30448;30449;30450 30447 6 KSDIYVCMISYAHNVAAQGK Unmodified 2254.0875 0.087458159 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 1 11 0.707 1 2 1 70.506 70.506 4;5 2.3954E-08 18056 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.853 9.9115 138.39 257.7 231.62 158.58 204.31 271.33 130 251 232 157 204 260 3 4 4 3 3 4 94317 11232 1595 10810 26249;26250;26251;26252 30451;30452;30453;30454;30455;30456 30456 6 KSDLFQDDLYPDTAGPEAALEAEEWFEGK Unmodified 3270.4881 0.48808429 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 1 10.3 3.77 1 2 93.434 93.434 4;5 6.8375E-27 35280 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.001 77.097 112.16 17.436 70.786 85.35 144.91 82.777 105 18 68 83 145 80 5 2 2 3 5 3 13722 11233 3336 10811 26253;26254;26255 30457;30458;30459;30460;30461 30458 5 KSDLFQEDLYPPTAGPDPALTAEEWLGGR Unmodified 3172.5353 0.53530926 1289 O89053 Coro1a Coronin-1A yes yes 0 0 0 1 7.5 3.2 1 2 1 89.155 89.155 3;4;5 3.115E-06 33482 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.386 45.291 74.864 37.355 18.987 39.885 70.865 58.36 70 37 18 37 69 56 3 1 2 2 3 3 24017 11234 1289 10812 26256;26257;26258;26259 30462;30463;30464;30465;30466;30467 30463 6 KSEIGIAMGSGTAVAK Unmodified 1518.8076 0.80757813 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 1 9 0 1 55.765 55.765 3 0.0097604 15863 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.955 19.601 48.943 25.69 47.984 0 0 49.036 46 28 46 0 0 46 1 1 1 0 0 1 2817.8 11235 1242 10813 26260 30468 30468 1 KSETLQQK Unmodified 960.52401 0.52400971 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 9.33 2.62 1 1 1 35.997 35.997 3 0.015531 7493 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.042 29.754 376.73 555.51 638.21 548.88 466.3 688.12 355 556 645 545 476 658 2 3 3 3 2 3 40817 11236 510 10814 26261;26262;26263 30469;30470;30471 30470 3 KSEVQAHSPSR Unmodified 1224.6211 0.62109799 1424 P20357;G3UZV6 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 6.5 0.5 1 1 28.179 28.179 4 0.00060963 4649 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.089 45.491 157.16 193.95 111.62 72.506 194.72 172.47 148 194 111 74 195 167 2 2 1 1 2 2 7060.9 11237 1424 10815 26264;26265 30472;30473 30473 2 KSGVGNIFIK Unmodified 1061.6233 0.62332982 1484 P29341;A0A2I3BR37;Q8C7D3 Pabpc1;Pabpc5 Polyadenylate-binding protein 1 yes no 0 0 0 1 11.5 0.5 1 1 56.769 56.769 3 0.038205 12863 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.627 11.905 147.97 0 197.35 119.39 174.69 175.17 139 0 188 123 178 169 1 0 1 1 1 1 8757.8 11238 1484 10816 26266;26267 30474;30475 30475 2 KSGVGNVFIK Unmodified 1047.6077 0.60767975 549 Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9;V9GXG3 Pabpc4 Polyadenylate-binding protein yes no 0 0 0 1 10 0 1 53.177 53.177 3 0.0014326 12973 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.289 39.153 59.375 0 119.8 0 86.818 0 56 0 111 0 83 0 1 0 1 0 1 0 4313.2 11239 549 10817 26268 30476 30476 1 KSHDVNVEDLNK 2 Deamidation (N) 1398.6627 0.66268803 186 A0A1L1STY4;A0A1L1SVG0;A0A0R4J0S7 yes no 0 2 0 1 5 0 1 96.001 96.001 3 0.021861 35540 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.084 14.108 88.269 41.359 97.7 0 113.51 75.645 83 46 93 0 111 74 1 1 1 0 1 1 38921 11240 186 10818 26269 30477 30477 66;67 1 KSHEAEVLK Unmodified 1039.5662 0.56620887 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 1 7 0 1 39.095 39.095 4 0.01196 9537 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.79 16.265 0 38.116 74.876 65.22 72.429 57.629 0 37 74 65 74 56 0 1 1 1 1 1 5498.2 11241 1619 10819 26270 30478 30478 1 KSHTFLPK Unmodified 956.54435 0.54435122 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 11 1 1 1 42.167 42.167 3;4 0.0063436 7159 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.954 40.606 108.53 169.39 313.49 81.855 328.81 306.15 102 171 303 83 328 296 1 2 2 1 2 2 19536 11242 1390 10820 26271;26272 30479;30480 30480 2 KSLLIGCQVTGK Unmodified 1302.733 0.73295662 3247 Q9JM63 Kcnj10 ATP-sensitive inward rectifier potassium channel 10 yes yes 0 0 0 1 12 0 1 56.628 56.628 3 0.0011702 12839 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.277 54.874 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11243 3247 10821 26273 30481 30481 1 KSLLVQTK Unmodified 915.57532 0.57531699 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 1 11.5 0.5 1 1 48.893 48.893 3 0.01753 9880 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.979 27.236 0 164.44 384.69 129.89 125.38 392.97 0 158 370 130 130 372 0 1 2 1 1 2 26347 11244 1467 10822 26274;26275 30482;30483 30483 2 KSLNAGAYSK Unmodified 1037.5506 0.55055881 1268 O88531;B1B0P8;B1B0P9 Ppt1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 1 10.5 0.5 1 1 42.466 42.466 3 0.0015167 8778 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.573 53.255 58.203 41.228 48.838 82.44 52.974 52.854 56 42 51 79 56 51 2 1 1 1 1 1 8103 11245 1268 10823 26276;26277 30484;30485 30484 2 KSPGTQAPK Unmodified 912.50288 0.50288033 361 A0A286YDA2;A0A286YDT3;E9Q5C9;A0A286YDV7 Nolc1 yes no 0 0 0 1 9 0 1 32.441 32.441 3 0.019685 5703 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.167 33.12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11246 361 10824 26278 30486 30486 1 KSPLTICFPEYPGSNTYEDAAAYIQTQFESK Unmodified 3554.6552 0.6551664 1411 P18872;F6WC15 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 1 9.4 1.85 2 2 1 90.589 90.589 4;5 3.0231E-13 32867 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.511 50.37 9.5583 19.571 135.46 19.594 77.782 49.285 9 19 126 19 75 47 1 1 4 1 3 3 26076 11247 1411 10825 26279;26280;26281;26282;26283 30487;30488;30489;30490;30491 30487 5 KSPYLPSAHR Unmodified 1154.6196 0.61964142 1830 Q8VCK3;P83887 Tubg2;Tubg1 Tubulin gamma-2 chain;Tubulin gamma-1 chain yes no 0 0 0 1 11 0 1 35.349 35.349 4 0.044805 6080 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.625 14.066 0 0 0 79.751 60.139 121.94 0 0 0 74 65 116 0 0 0 1 1 1 1879.7 11248 1830 10826 26284 30492 30492 1 KSQTTGFPSLITIFSAPNYLDVYNNK Unmodified 2917.4862 0.48617422 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 1 8.88 4.57 2 3 3 93.286 93.286 3;4;5 1.184E-41 26509 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.58 123.72 193.68 80.55 207.34 138.52 25.538 132.66 182 84 197 130 26 125 5 2 4 5 3 4 83747 11249 811;1786 10827 26285;26286;26287;26288;26289;26290;26291;26292 30493;30494;30495;30496;30497;30498;30499;30500;30501;30502;30503;30504 30503 12 KSQTTGFPSLITIFSAPNYLDVYNNK Deamidation (N) 2918.4702 0.47018981 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 1 0 1 11 0 2 93.446 93.446 4;5 1.284E-07 30298 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.92 48.289 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 11688 11250 811;1786 10827 26293;26294 30505;30506 30505 212;213 2 KSSATVGPK Unmodified 873.49198 0.4919813 1468 P27661 H2afx Histone H2AX yes yes 0 0 0 1 9 0.816 1 1 1 34.874 34.874 3 0.0044766 6997 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.927 53.076 933.2 835.24 1327.9 1118.1 1313.6 1280.1 881 865 1324 1118 1347 1236 3 3 3 3 3 3 66892 11251 1468 10828 26295;26296;26297 30507;30508;30509 30507 3 KSSTPEEVK Unmodified 1003.5186 0.51858998 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 6.4 1.02 1 2 1 1 36.372 36.372 3;4 0.0026184 7402 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.507 32.78 1091.4 1012.1 1504.5 1198.2 1102.5 1273.3 1029 1044 1501 1188 1143 1224 5 6 6 5 5 5 168990 11252 1410 10829 26298;26299;26300;26301;26302 30510;30511;30512;30513;30514;30515 30515 6 KSTILQQQFNR Unmodified 1361.7415 0.74154747 287 E9PUM4;A0A1L1SQ51 Tln2 yes no 0 0 0 1 11 0 1 47.845 47.845 3 0.00083427 10681 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.274 59.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8921.7 11253 287 10830 26303 30516 30516 1 KSTQVVSDAAYK Unmodified 1295.6721 0.67213051 3134 Q9DC07;F6RM14;B7ZCI2 Nebl LIM zinc-binding domain-containing Nebulette yes no 0 0 0 1 7.5 0.5 1 1 44.748 44.748 3 3.8126E-05 12370 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.468 66.768 78.806 0 100.23 0 0 118.33 74 0 93 0 0 111 1 0 1 0 0 1 9462.6 11254 3134 10831 26304;26305 30517;30518 30517 2 KSVQPTSEER Unmodified 1159.5833 0.5833155 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 1 13 0 1 29.513 29.513 3 0.0066886 6452 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.958 44.727 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 2601.8 11255 431 10832 26306 30519 30519 1 KSWLHNDLK Unmodified 1139.6087 0.60874239 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 1 10 0 1 49.686 49.686 4 0.0021813 11599 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.067 36.373 148.49 125.23 184.33 0 277.28 210.62 140 130 178 0 272 205 1 1 1 0 1 1 10648 11256 2736 10833 26307 30520 30520 1 KTAAHAIPK Unmodified 935.55525 0.55525025 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 1 9 0 1 35.258 35.258 4 0.010377 6883 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.608 25.26 221.63 263.36 218.97 242.52 300.52 245.13 209 265 228 239 306 238 1 1 1 1 1 1 9454.4 11257 3249 10834 26308 30521 30521 1 KTAAVCVAK Unmodified 946.52699 0.52698659 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 1 10.5 1.12 1 1 1 1 41.279 41.279 3 0.00063092 8349 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.43 48.973 1527.6 1574.8 1650.2 1293.9 419.93 677.72 1439 1599 1648 1250 415 647 3 3 2 2 2 3 139680 11258 1203;3123 10835 26309;26310;26311;26312 30522;30523;30524;30525 30523 4 KTEAPAAAGPEAK Unmodified 1239.6459 0.64591575 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 7.67 2.56 1 1 2 1 1 37.994 37.994 3;4 1.0153E-15 9924 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 140.96 100.38 1351 926.17 1541.1 1403.6 2612.5 2336.2 1270 932 1534 1404 2636 2256 7 6 7 8 9 7 367400 11259 2769 10836 26313;26314;26315;26316;26317;26318 30526;30527;30528;30529;30530;30531;30532;30533;30534 30529 9 KTEDSASEVTVEDSGESLEDLMAR Unmodified 2597.165 0.1650356 2704 Q8VE47 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 1 3 0 1 68.962 68.962 3 9.5109E-10 25377 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.677 58.483 20.27 0 19.589 19.465 7.1723 39.237 19 0 19 19 9 37 1 0 1 1 1 1 2002.3 11260 2704 10837 26319 30535 30535 1 KTEQGPPSSEYIFER Unmodified 1766.8475 0.84752869 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 1 6 0 1 51.627 51.627 3 0.0011456 16107 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.894 50.757 0 59.584 0 0 65.345 77.019 0 56 0 0 65 74 0 1 0 0 1 1 5401 11261 1489 10838 26320 30536 30536 1 KTFLGQNK Unmodified 934.52362 0.52361577 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 1 12 0 1 46.054 46.054 3 0.0076967 8805 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.213 53.139 0 159.81 178.38 152.54 215.82 212.37 0 153 180 153 220 205 0 1 1 1 1 1 12819 11262 3056 10839 26321 30537 30537 1 KTFNSVSK Unmodified 909.49198 0.4919813 1740 P62812 Gabra1 Gamma-aminobutyric acid receptor subunit alpha-1 no no 0 0 0 1 10.5 0.5 1 1 41.714 41.714 3 0.027153 8291 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.303 33.576 188.64 140.11 277.55 336.47 117.69 187.62 178 148 272 325 120 176 1 1 1 2 1 1 17437 11263 1740 10840 26322;26323 30538;30539 30539 2 KTFPDFVYK Unmodified 1143.5964 0.59644637 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 1 9.5 0.5 1 1 63.22 63.22 3 0.0031672 17398 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.979 51.212 158.41 274.37 197.05 169.36 250.1 288.15 148 271 200 170 256 277 1 2 1 1 1 1 49057 11264 207 10841 26324;26325 30540;30541 30541 2 KTFSHELSDFGLESTTGEVPVVAIR Unmodified 2718.3865 0.38646018 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 1 7 0 1 75.259 75.259 4 1.0676E-08 26327 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.109 45.793 0 0 47.659 47.438 0 40.508 0 0 46 46 0 38 0 0 1 1 0 1 3814.4 11265 1470 10842 26326 30542 30542 1 KTFTAWCNSHLR Unmodified 1519.7354 0.73541624 418;310;3209 A1BN54;Q7TPR4;O88990;A0A1L1SV25;P57780;Q9JI91 Actn1;Actn3;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 1 11.5 0.5 1 1 47.241 47.241 4 2.3357E-08 9341 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.96 96.545 295.83 287.89 170.39 192.37 148.69 178.04 278 292 167 176 148 171 2 2 1 1 1 1 53468 11266 418;310;3209 10843 26327;26328 30543;30544 30544 2 KTFVSQASATMQQYAQR Unmodified 1943.9523 0.95234489 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 12 0 1 59.729 59.729 3 0.00023161 14118 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.52 54.463 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 2655.7 11267 2028 10844 26329 30545 30545 1 KTGQAAGFSYTDANK Unmodified 1557.7423 0.74233534 1753 P62897 Cycs Cytochrome c, somatic yes yes 0 0 0 1 9.33 2.62 2 2 2 45.999 45.999 3;4 6.6868E-17 12867 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.48 102.16 851.81 274.45 770.89 844.26 1061.6 712.7 798 273 747 823 1072 684 6 4 4 6 6 5 187810 11268 1753 10845 26330;26331;26332;26333;26334;26335 30546;30547;30548;30549;30550;30551;30552 30546 7 KTLNPVFNEQFTFK Unmodified 1711.8934 0.89335667 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 1 10.3 1.37 2 2 1 1 70.024 70.024 3;4 1.1574E-18 20616 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.25 105.29 251.36 229.7 432.14 312.1 309.46 445.29 236 223 419 305 319 426 4 2 4 4 4 5 109080 11269 1553 10846 26336;26337;26338;26339;26340;26341 30553;30554;30555;30556;30557;30558 30556 6 KTLVAFPQK Unmodified 1030.6175 0.61751616 1960 Q3U422 Ndufv3 yes yes 0 0 0 1 11.5 0.5 1 1 55.519 55.519 3 0.011003 12460 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.624 39.333 0 127.68 96.842 196.43 0 0 0 120 93 185 0 0 0 1 1 2 0 0 17914 11270 1960 10847 26342;26343 30559;30560 30560 2 KTLVLIGAQGVGR Unmodified 1310.8034 0.80341945 3241;3341 Q9WV34;Q9JLB0 Mpp2;Mpp6 MAGUK p55 subfamily member 2;MAGUK p55 subfamily member 6 no no 0 0 0 1 1 0 1 59.698 59.698 3 0.00022356 19364 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.486 58.282 39.357 39.368 57.873 116.59 126.35 124.31 37 37 56 112 130 120 1 1 1 2 2 2 14208 11271 3341;3241 10848 26344 30561;30562 30561 2 KTLVLLGAHGVGR Unmodified 1319.8038 0.8037538 1 A0A067XG53;O70589;F6Y9I5 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 1 1 0 1 54.444 54.444 4 0.00079035 16902 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.181 54.222 30.044 0 0 60.177 54.84 28.283 28 0 0 56 56 28 1 0 0 1 1 1 2452.3 11272 1 10849 26345 30563 30563 1 KTNLALVVGTNSWR Unmodified 1557.8627 0.86272524 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 1 1 0 1 62.908 62.908 3 0.00023159 21009 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.781 53.864 0 20.216 0 39.22 64.897 37.59 0 19 0 37 65 37 0 1 0 1 1 1 3470.9 11273 2187 10850 26346 30564 30564 1 KTPCGEGSK Unmodified 962.44913 0.4491302 1680 P60867 Rps20 40S ribosomal protein S20 yes yes 0 0 0 1 8 0 1 31.474 31.474 3 0.0068986 5618 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.942 26.632 64.053 64.841 0 53.915 97.214 51.592 60 65 0 51 97 51 1 1 0 1 1 1 4608 11274 1680 10851 26347 30565 30565 1 KTPWGIIEVENLNHCEFALLR Unmodified 2538.3053 0.3053135 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 1 13 0 1 78.88 78.88 4 1.6641E-07 30316 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.214 55.134 0 58.367 72.795 84.654 91.795 46.417 0 56 74 83 93 46 0 1 1 1 1 1 7342.7 11275 402;3384 10852 26348 30566 30566 1 KTQEILSQLPFK Unmodified 1430.8133 0.81331543 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 0 0 0 1 12 1 1 1 69.13 69.13 3 0.00053292 25451 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.891 42.453 93.515 85.991 79.847 0 0 84.214 88 88 79 0 0 79 1 1 1 0 0 1 14563 11276 345 10853 26349;26350 30567;30568 30568 2 KTQHSTLSR Unmodified 1056.5676 0.56760585 1696;1197 P61264;O35526;D6RFB9;A0A0J9YUA0 Stx1b;Stx1a Syntaxin-1B;Syntaxin-1A no no 0 0 0 1 10 1.58 1 1 1 1 25.699 25.699 4 9.7973E-05 3682 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.42 93.071 75.056 10.695 83.031 143.92 180.15 82.082 70 11 80 137 180 77 2 1 1 3 2 1 28743 11277 1696;1197 10854 26351;26352;26353;26354 30569;30570;30571;30572 30571 4 KTQQFFDEMADPDLLEESSSLLEPNEMGR Unmodified 3355.5224 0.52243766 1151 K3W4T3 Atp6v0a1 V-type proton ATPase subunit a yes yes 0 0 0 1 5 0 1 90.966 90.966 4 0.030697 34515 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 25.054 18.826 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 964.29 11278 1151 10855 26355 30573 30573 1 KTSCEFTGDILR Unmodified 1425.6922 0.69221402 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 1 7 0.816 1 1 1 53.266 53.266 3 2.8792E-10 17043 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.56 77.327 547.76 450.81 610.31 422.41 479.57 556.63 516 468 609 428 479 535 2 2 2 2 1 2 85190 11279 1741 10856 26356;26357;26358 30574;30575;30576 30574 3 KTSGNQDEILVIR Unmodified 1471.7995 0.79945628 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 8.67 3.09 1 1 1 50.422 50.422 3 7.7349E-15 14890 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.54 74.376 245.81 207.23 169.3 167.5 262.73 318.7 231 213 176 167 269 306 2 2 2 2 2 2 45645 11280 118;1534 10857 26359;26360;26361 30577;30578;30579 30578 3 KTSYAQHQQVR Unmodified 1344.6898 0.68984625 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 1 10 1 1 1 27.207 27.207 4 0.0013662 4054 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.435 48.804 38.585 8.566 0 9.837 19.874 0 36 9 0 9 19 0 2 1 0 1 1 0 2946.3 11281 1844 10858 26362;26363 30580;30581 30580 2 KTSYPDCIK Unmodified 1110.5379 0.53794521 2797 Q921I1;E9Q035;D3YYR8;E9Q2Q7;E9Q939 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 1 8 0 1 44.222 44.222 3 0.00581 11197 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.632 47.513 0 0 0 38.872 83.43 46.655 0 0 0 37 83 46 0 0 0 1 1 1 4372.7 11282 2797 10859 26364 30582 30582 1 KTTAASGDLAQAPGAFK Unmodified 1632.8471 0.84713476 1424 P20357;G3UZV6 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 7.5 0.5 1 1 52.552 52.552 3 7.1945E-06 15851 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.018 56.653 30.044 0 38.812 27.44 73.177 86.39 28 0 37 28 74 83 1 0 1 1 2 2 11330 11283 1424 10860 26365;26366 30583;30584 30583 2 KTTGEENDPATWK Unmodified 1475.6892 0.68923713 815 E9PUD2 Dnm1l yes yes 0 0 0 1 6 0 1 47.731 47.731 3 0.046211 14292 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.996 19.193 0 19.242 58.252 26.604 28.066 0 0 19 56 28 28 0 0 1 1 1 1 0 2894.1 11284 815 10861 26367 30585 30585 1 KTTGLVGLAVCDTPHER Unmodified 1852.9465 0.94653123 2892 Q9CPP6 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 0 0 0 1 8 0 1 51.442 51.442 4 0.016442 14529 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.127 23.5 0 59.584 0 50.278 0 49.036 0 56 0 46 0 46 0 1 0 1 0 1 4778.8 11285 2892 10862 26368 30586 30586 1 KTTSSTLK Unmodified 864.49165 0.49164694 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 1 9 0 1 35.377 35.377 3 0.053355 6918 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.597 17.202 79.032 73.407 0 88.759 104.21 105.76 74 74 0 83 107 102 1 1 0 1 1 1 3722.9 11286 1044 10863 26369 30587 30587 1 KTVLGVPEVLLGILPGAGGTQR Unmodified 2174.2787 0.27868805 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 1 12 0 2 89.224 89.224 3;4 6.1057E-06 25414 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.131 52.743 20.335 5.32 8.7574 19.711 28.383 9.594 19 5 9 19 28 9 1 1 1 1 1 1 8074.1 11287 2435 10864 26370;26371 30588;30589 30588 2 KTVQVEQSK Unmodified 1045.5768 0.57677356 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 8 0 1 37.813 37.813 3 0.002384 8277 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.014 51.482 0 69.16 0 49.085 63.418 67.48 0 65 0 46 65 65 0 1 0 1 1 1 6328.2 11288 879 10865 26372 30590 30590 1 KTVTAMDVVYALK Unmodified 1437.7901 0.79013715 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 1 12.2 0.829 1 1 2 73.625 73.625 3;4 3.1836E-05 27652 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.17 63.59 474.43 318.24 290.13 312.72 103.33 342.44 445 333 288 297 111 324 4 4 3 2 1 3 53455 11289 1739 10866 26373;26374;26375;26376 30591;30592;30593;30594;30595 30595 5 KTYDLLFK Unmodified 1026.575 0.57498264 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 1 10 0 1 64.361 64.361 3 0.019187 17859 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.657 34.404 158.25 225.41 262.18 229.61 268.92 360.1 150 226 265 229 279 345 1 1 1 1 1 1 20552 11290 1684 10867 26377 30596 30596 1 KTYGGYQGR Unmodified 1028.5039 0.50394297 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 1 9 0 1 32.305 32.305 3 0.0014615 5678 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.096 69.302 135.5 0 129.8 155.49 96.338 184.87 127 0 127 151 105 176 1 0 1 1 1 1 10141 11291 3258 10868 26378 30597 30597 1 KVAAGHELQPLAIVDQR Unmodified 1844.0268 0.026830458 1439 P23242 Gja1 Gap junction alpha-1 protein yes yes 0 0 0 1 8 0 1 55.478 55.478 4 0.016443 16490 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.127 21.432 186.96 171.78 172.09 159.25 169.7 206.23 176 176 176 158 176 198 1 1 1 1 1 1 3466.4 11292 1439 10869 26379 30598 30598 1 KVACIGAWHPAR Unmodified 1364.7136 0.71355858 1467 P27659;A0A2R8VHN4;Q9CQ09;E9PWZ3 Rpl3;Rpl3l 60S ribosomal protein L3 yes no 0 0 0 1 12 0 1 44.81 44.81 4 0.0057956 8329 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.275 40.175 0 86.632 100.47 105.5 0 88.478 0 83 102 102 0 83 0 1 1 1 0 1 6388.3 11293 1467 10870 26380 30599 30599 1 KVADALANAAGHLDDLPGALSALSDLHAHK Unmodified 2990.5574 0.5573821 2735 Q91VB8 haemaglobin alpha 2 yes yes 0 0 0 1 9 0 1 87.004 87.004 5 1.445E-05 30482 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.306 26.09 20.154 0 39.111 18.436 0 0 19 0 37 19 0 0 1 0 1 1 0 0 6117.3 11294 2735 10871 26381 30600 30600 1 KVAEIPFNSTNK Unmodified 1346.7194 0.71941505 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 10 2.16 1 1 1 53.93 53.93 3 9.0152E-06 15025 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.38 81.284 187.2 71.924 381.15 337.07 222.3 138.58 176 74 371 333 222 130 2 1 3 3 2 1 46537 11295 106 10872 26382;26383;26384 30601;30602;30603 30602 3 KVAVSAK Unmodified 701.44357 0.44357454 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 1 10 0 1 37.98 37.98 3 0.023201 7092 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.732 30.738 99.029 150.79 0 127.5 194.61 162.87 93 148 0 120 197 158 1 1 0 1 1 1 9152.6 11296 2904 10873 26385 30604 30604 1 KVCIVGSGNWGSAIAK Unmodified 1645.861 0.86101068 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 1 11.5 0.5 1 1 62.444 62.444 3 4.4484E-06 15150 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.19 90.019 29.865 0 30.145 0 29.288 46 28 0 28 0 28 46 1 0 1 0 1 1 10319 11297 1368 10874 26386;26387 30605;30606 30606 2 KVDEAIALFQK Unmodified 1260.7078 0.70778773 3383 Q9Z1Q9 Vars Valine--tRNA ligase yes yes 0 0 0 1 7 0 1 71.396 71.396 3 0.052478 24673 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.188 20.583 0 85.781 151.42 80.015 89.297 125.37 0 83 148 83 93 120 0 1 1 1 1 1 8655.6 11298 3383 10875 26388 30607 30607 1 KVDGQQTIIACIESHQFQAK Unmodified 2300.1583 0.15831492 1564 P47754;D6RCW7 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 1 7.5 0.5 1 1 64.754 64.754 4 7.7402E-11 21516 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.425 69.17 188.07 154.37 0 59.333 165.68 182.89 176 157 0 56 167 176 2 2 0 1 2 2 24906 11299 1564 10876 26389;26390 30608;30609 30608 2 KVDLSQPLIATCR Unmodified 1499.813 0.81299786 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 1 9 0 1 57.696 57.696 3 0.00029563 16799 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.706 54.706 128.76 0 0 167.39 282.16 179.56 120 0 0 158 283 176 1 0 0 1 1 1 13772 11300 1608 10877 26391 30610 30610 1 KVDPPTTVEPVSLGK Unmodified 1565.8665 0.86647322 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 7 0 1 58.098 58.098 3 0.00011707 18358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.601 60.496 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11301 1999 10878 26392 30611 30611 1 KVDQPPEAK Unmodified 1010.5397 0.53965977 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 1 6 0 1 38.157 38.157 3 0.0068986 9766 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.942 36.409 108.85 0 100.08 0 154.81 0 102 0 93 0 148 0 1 0 1 0 1 0 13110 11302 2137 10879 26393 30612 30612 1 KVDVTSR Unmodified 803.45012 0.45011648 491 A2ALV3;Q62420;Q8BXU5;A2ALV1 Sh3gl2 Endophilin-A1 yes no 0 0 0 1 8 0 1 33.067 33.067 3 0.039525 6169 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.628 34.009 318.01 346.7 0 0 290.94 391.45 298 346 0 0 291 375 1 1 0 0 1 1 110750 11303 491 10880 26394 30613 30613 1 KVDWLTEK Unmodified 1017.5495 0.54949617 1345;1679;135 A0A0N4SVP8;Q91VC3;A2AFK7;E9PV04;P10630;Q8BTU6;A0A338P6X5;E9Q561;P60843 Eif4a3;Gm8994;Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 1 9 0 1 58.395 58.395 3 0.011144 17084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.14 46.951 0 177.69 0 266.02 268.03 246.06 0 167 0 248 276 238 0 1 0 1 1 1 29978 11304 135;1345;1679 10881 26395 30614 30614 1 KVEDLFLTFAK Unmodified 1309.7282 0.72818882 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 11 1.53 1 2 1 2 81.881 81.881 3;4 7.3236E-08 26198 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.29 67.738 778.74 608.23 1018.3 1035.8 597.95 1096.9 732 603 1007 1011 612 1048 6 6 7 8 6 7 180620 11305 551 10882 26396;26397;26398;26399;26400;26401 30615;30616;30617;30618;30619;30620;30621;30622;30623;30624 30618 10 KVEEAEPEEFVVEK Unmodified 1660.8196 0.8195826 3141 Q9DCC5;P23198;D3Z313;D3Z1A9 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 1 4 0 2 60.36 60.36 3;4 2.1332E-05 21243 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.646 52.617 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 6667.5 11306 3141 10883 26402;26403 30625;30626 30625 2 KVESLEEEIQFLR Unmodified 1618.8566 0.85663681 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 7.5 3.2 1 2 1 74.3 74.3 2;3 7.7068E-14 27973 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.78 97.508 830.65 708.68 846.96 608.74 624.68 840.82 781 732 851 596 637 798 4 7 7 5 4 5 101980 11307 1304 10884 26404;26405;26406;26407 30627;30628;30629;30630;30631;30632;30633 30627 7 KVESLLDELAFVR Unmodified 1517.8453 0.84534384 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 9.25 2.28 1 1 1 1 85.41 85.41 3 1.1606E-07 32088 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.64 82.573 532.22 479.49 499.31 331.27 144.24 618.43 500 491 490 326 148 584 6 7 7 6 3 8 74652 11308 1557 10885 26408;26409;26410;26411 30634;30635;30636;30637;30638;30639;30640;30641;30642 30635 9 KVESLQEEIAFLK Unmodified 1532.845 0.84500949 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 1 9 2.35 1 2 1 74.624 74.624 3;4 0.00019511 26514 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.494 66.953 187.36 296.17 133.15 207.38 193.71 214.07 176 287 130 195 194 204 3 4 2 4 3 3 28139 11309 1423 10886 26412;26413;26414;26415 30643;30644;30645;30646;30647 30644 5 KVETISSGK Unmodified 947.52876 0.52876073 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 8 0 1 40.619 40.619 3 0.0035447 9505 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.23 47.7 317.57 220.11 0 312.05 203.48 327.85 297 227 0 289 219 313 1 1 0 1 1 1 14427 11310 1999 10887 26416 30648 30648 1 KVEYTLGEESEAPGQR Unmodified 1791.8639 0.86390703 119 A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6 Eif4g1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 1 5 0 1 49.298 49.298 3 0.0017329 15653 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.768 44.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11311 119 10888 26417 30649 30649 1 KVFASLPQVER Unmodified 1272.719 0.71902112 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 1 10.5 0.5 1 1 56.295 56.295 3 0.0028827 13920 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.495 45.709 307.27 153.41 163.95 278.83 287.92 289.2 288 158 167 269 297 279 2 1 1 2 2 2 65843 11312 1263 10889 26418;26419 30650;30651 30651 2 KVFGDSSR Unmodified 894.45593 0.45593014 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 9 0 1 37.036 37.036 3 0.0041125 7603 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.8 63.026 0 466.23 624.47 0 660.03 0 0 448 603 0 631 0 0 1 1 0 1 0 34434 11313 1557 10890 26420 30652 30652 1 KVGLIAAR Unmodified 826.53887 0.53887191 1757 P62918 Rpl8 60S ribosomal protein L8 yes yes 0 0 0 1 11 0 1 43.315 43.315 3 0.016552 9051 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.856 38.044 0 0 0 435.01 0 240.92 0 0 0 398 0 226 0 0 0 1 0 1 19502 11314 1757 10891 26421 30653 30653 1 KVGWNSQPTR Unmodified 1171.6098 0.60980502 180 A0A0R4J0P1;D3YTT4;Q9D7B6 Acad8 Isobutyryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 10 0 1 39.177 39.177 3 0.039121 7448 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.448 35.016 54.226 29.413 58.554 0 53.346 0 51 32 56 0 51 0 1 1 1 0 1 0 2780.8 11315 180 10892 26422 30654 30654 1 KVGYTPDWIFLLR Unmodified 1606.8871 0.88714908 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 11.5 1.12 1 1 1 1 82.232 82.232 3 3.3422E-15 22758 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.37 113.02 2432.3 1549.9 2324.7 1037.8 2218.8 1952.5 2287 1618 2281 1037 2227 1879 8 6 5 3 7 5 371570 11316 2185 10893 26423;26424;26425;26426 30655;30656;30657;30658;30659;30660;30661;30662 30659 8 KVHVIFNYK Unmodified 1146.655 0.6549643 1375 P14211 Calr Calreticulin yes yes 0 0 0 1 11.5 0.5 1 1 51.387 51.387 4 0.0016317 12192 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.827 60.195 1039.5 834.28 1073.2 309.03 1128.3 1182 978 858 1055 314 1129 1139 3 3 3 2 3 3 82182 11317 1375 10894 26427;26428 30663;30664;30665;30666 30663 4 KVIAAMTVGK Unmodified 1016.6052 0.60523691 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 1 1 0 1 58.416 58.416 3 0.0017453 18771 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.625 54.952 0 0 0 0 45.781 67.984 0 0 0 0 46 65 0 0 0 0 1 1 6518.8 11318 3123 10895 26429 30667 30667 1 KVIASMTVGK Unmodified 1032.6002 0.60015154 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 1 1 0 1 55.01 55.01 3 0.0024663 17128 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.062 13.438 59.686 0 67.537 55.952 65.42 0 56 0 65 56 65 0 1 0 1 1 1 0 7910.8 11319 1203 10896 26430 30668 30668 1 KVICIPK Unmodified 856.52044 0.52044465 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 1 6 5 1 1 51.989 51.989 3 0.013855 12176 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.906 57.654 29.389 863.21 53.945 654.58 940.05 46.947 28 814 56 618 929 46 1 2 1 2 2 1 86054 11320 3214 10897 26431;26432 30669;30670 30670 2 KVICLVGAGISTSAGIPDFR Unmodified 2060.1088 0.10884553 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 1 12 0 2 78.105 78.105 3;4 1.1327E-11 21073 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.39 89.105 20.274 31.323 8.4932 9.0522 14.813 13.435 19 32 9 9 15 13 1 2 1 1 1 1 13023 11321 2702 10898 26433;26434 30671;30672 30671 2 KVITAFNDGLNHLDSLK Deamidation (N) 1884.9945 0.99452728 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 1 0 1 8 0 1 69.756 69.756 4 0.0032546 23214 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.621 29.339 0 76.544 131.1 111.5 107.03 115.27 0 74 130 111 111 111 0 1 1 1 1 1 8288.3 11322 562 10899 26435 30673 30673 160;161 1 KVITAFNDGLNHLDSLK Unmodified 1884.0105 0.010511692 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 0 0 1 10.5 1.28 3 2 3 1 1 71.199 71.199 3;4;5 1.7132E-42 21614 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 165.2 121.01 2552.5 2782.7 3043.5 3082 4976.9 3554 2408 2771 3060 3036 5006 3459 10 11 13 10 13 11 367960 11323 562 10899 26436;26437;26438;26439;26440;26441;26442;26443;26444;26445 30674;30675;30676;30677;30678;30679;30680;30681;30682;30683;30684;30685;30686;30687;30688;30689 30680 16 KVLFCPVK Unmodified 989.57321 0.5732085 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 1 1 0 1 58.5 58.5 3 0.016498 18834 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.919 43.789 0 97.888 0 38.872 83.43 46.655 0 92 0 37 83 46 0 1 0 1 1 1 3372.6 11324 3316 10900 26446 30690 30690 1 KVLGLQDTIK Unmodified 1113.6758 0.67575932 3360 Q9Z0P4;A0A1W2P831 Palm Paralemmin-1 no no 0 0 0 1 11.5 1.5 1 1 57.091 57.091 3 0.0041455 14934 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.261 28.019 420.99 275.18 426 487.24 464.16 330.57 396 292 431 477 476 319 2 2 2 2 2 1 26574 11325 3360 10901 26447;26448 30691;30692 30691 2 KVLIIGGGDGGVLR Unmodified 1352.814 0.81398414 2181 Q64674 Srm Spermidine synthase yes yes 0 0 0 1 11 0 1 61.066 61.066 3 0.0037054 16077 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.599 36.296 0 0 0 182.53 0 157.77 0 0 0 167 0 148 0 0 0 1 0 1 12648 11326 2181 10902 26449 30693 30693 1 KVLIQTK Unmodified 828.54329 0.54328858 2936 Q9CQN1 Trap1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 1 12 0 1 46.73 46.73 3 0.022675 9066 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.165 29.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11327 2936 10903 26450 30694 30694 1 KVLLIGK Unmodified 769.54256 0.5425603 1657 P58854 Tubgcp3 Gamma-tubulin complex component 3 yes yes 0 0 0 1 1 0 1 58.784 58.784 3 0.023184 18979 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.741 22.954 48.796 44.709 56.52 25.674 83.011 76.515 46 46 56 28 83 74 1 1 1 1 1 1 2791.2 11328 1657 10904 26451 30695 30695 1 KVMLALPSVR Unmodified 1112.674 0.67398518 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 1 1 0 1 61.608 61.608 3 0.0058851 20470 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.266 21.019 148.04 52.881 141.51 111.57 128.21 77.092 139 56 139 112 130 74 2 1 2 2 2 1 20046 11329 1995 10905 26452 30696;30697 30697 2 KVNAEGTVDTVFSEVCTYLDSLK Unmodified 2574.2523 0.25233446 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 1 8 0.816 1 1 1 102.11 102.11 4 8.0862E-29 36075 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.68 103.44 20.848 24.115 49.199 27.162 17.286 14.431 20 24 48 26 17 14 3 2 3 2 1 1 8185 11330 3306 10906 26453;26454;26455 30698;30699;30700;30701 30699 4 KVNLAELFK Unmodified 1060.6281 0.62808085 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 1 11.4 1.02 1 2 1 1 70.054 70.054 3;4 0.00036154 19984 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.4 74.891 1930.4 1743.4 2006 2298.5 2924.2 1276 1815 1771 1998 2259 2923 1229 7 5 4 6 6 5 596570 11331 1867 10907 26456;26457;26458;26459;26460 30702;30703;30704;30705;30706;30707;30708;30709 30704 8 KVNLGVGAYR Unmodified 1075.6138 0.61382777 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 1 8.75 4.6 1 1 1 1 47.323 47.323 2;3 2.8718E-05 14249 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.47 77.353 765.1 756.46 793.19 880.45 942.31 943.17 721 770 811 865 967 910 3 2 2 4 3 4 72486 11332 1311 10908 26461;26462;26463;26464 30710;30711;30712;30713 30710 4 KVNVVEQEK Unmodified 1071.5924 0.59242362 1398 P17182;B1ARR7 Eno1 Alpha-enolase yes no 0 0 0 1 8.88 2.2 1 2 1 1 1 1 1 43.028 43.028 3;4 0.00022596 12346 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.74 53.097 3541.4 2923.6 3427.4 3285.7 4559 4697.8 3329 2977 3457 3260 4657 4529 8 8 8 8 10 10 526510 11333 1398 10909 26465;26466;26467;26468;26469;26470;26471;26472 30714;30715;30716;30717;30718;30719;30720;30721;30722;30723;30724;30725 30724 12 KVPEPEAIPPNILSYLVTGISVNCAYTSK Unmodified 3159.6526 0.65258762 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 1 10.5 0.5 1 1 95.311 95.311 4;5 3.3245E-06 30940 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.321 45.778 0 29.26 31.833 32.242 0 0 0 28 32 32 0 0 0 1 1 2 0 0 12939 11334 1096 10910 26473;26474 30726;30727 30727 2 KVPEPEAIPPNILSYLVTGISVNCAYTSK Deamidation (N) 3160.6366 0.63660321 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 1 0 1 13 0 1 95.027 95.027 4 8.5117E-06 38121 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.119 41.898 20.134 28.121 18.769 0 29.288 0 19 28 19 0 28 0 1 1 1 0 1 0 1489.8 11335 1096 10910 26475 30728 30728 288 1 KVPLDMSLFLK Unmodified 1289.7417 0.7417304 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 1 11.5 0.5 1 1 79.725 79.725 3;4 0.00099617 21566 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.204 41.499 98.852 216.95 244.1 339.58 0 365.64 93 214 250 324 0 343 1 2 2 3 0 3 21470 11336 728 10911 26476;26477 30729;30730;30731 30730 3 KVPQVSTPTLVEVSR Unmodified 1638.9305 0.93047046 656;655 CON__P02769;CON__P02768-1 no no 0 0 0 1 9.5 2.06 2 1 1 56.803 56.803 3;4 3.9465E-05 19411 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.347 63.093 224.95 63.299 549.51 256.89 150.49 146.44 212 65 523 259 158 139 3 2 5 3 3 3 85728 + 11337 656;655 10912 26478;26479;26480;26481 30732;30733;30734;30735;30736 30736 5 KVPTIFLSK Unmodified 1031.6379 0.63791725 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 1 4.67 5.19 2 1 64.282 64.282 3;4 0.00048681 15501 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.6 60.959 807.86 517.23 842.07 862.1 891.35 912.64 760 531 846 850 919 880 3 1 2 2 2 3 77493 11338 2594 10913 26482;26483;26484 30737;30738;30739 30739 3 KVQAAQSEAK Unmodified 1058.572 0.57202253 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 1 7.5 0.5 1 1 34.782 34.782 3 5.3198E-06 6807 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.12 76.394 78.882 103.21 66.549 84.875 174.62 162.38 74 102 65 83 176 157 1 1 1 1 2 2 13519 11339 2517 10914 26485;26486 30740;30741 30741 2 KVQEEFDIDMDAPETER Unmodified 2050.9154 0.91535026 715 D3YXH0;P63054 Igsf5;Pcp4 Purkinje cell protein 4 yes no 0 0 0 1 4 0 1 62.055 62.055 3 0.0039472 21899 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.047 37.517 30.044 0 0 20.767 0 29.848 28 0 0 19 0 28 1 0 0 1 0 1 2515.7 11340 715 10915 26487 30742 30742 1 KVQHSNAK Unmodified 910.49846 0.49846366 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 1 9.5 0.5 1 1 26.854 26.854 4 0.0010578 3924 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.95 66.866 97.529 22.547 0 89.108 85.659 66.846 91 22 0 83 88 65 2 1 0 1 1 1 2684.1 11341 1400;1401 10916 26488;26489 30743;30744 30743 2 KVQSGNINAAK Unmodified 1128.6251 0.62512073 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 1 9 0.816 1 1 1 37.974 37.974 3 5.004E-14 7965 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 154.94 101.69 206.19 146.2 296.11 103.47 209.22 290.38 194 148 287 102 205 278 2 1 3 2 1 3 22784 11342 1827 10917 26490;26491;26492 30745;30746;30747 30746 3 KVQSLQDEVAFLR Unmodified 1531.8358 0.83584179 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 8 0 1 65.435 65.435 3 0.02166 21208 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.964 21.305 59.808 55.551 0 80.882 0 69.29 56 56 0 74 0 65 1 1 0 1 0 1 4146.4 11343 154 10918 26493 30748 30748 1 KVQSLTK Unmodified 802.49125 0.49125301 1643 P56564;D3YY51 Slc1a3 Excitatory amino acid transporter 1;Amino acid transporter yes no 0 0 0 1 11 0 1 40.436 40.436 3 0.048702 7834 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.299 25.947 0 288.34 0 0 0 321.93 0 271 0 0 0 302 0 1 0 0 0 1 11323 11344 1643 10919 26494 30749 30749 1 KVSLELGGK Unmodified 929.55458 0.55458155 2633 Q8R0Y6;D3Z6B9;Q8K009 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 1 9 0 1 52.956 52.956 3 0.020131 14501 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.172 8.3589 177.2 122.52 230.29 158.97 0 0 167 130 227 158 0 0 1 1 1 1 0 0 14024 11345 2633 10920 26495 30750 30750 1 KVSQPIEGHAASFAQFK Unmodified 1843.9581 0.95808219 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 9 0.816 1 1 1 53.84 53.84 4 8.4157E-07 13030 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.661 60.603 482.1 614.17 591.09 615.11 564.73 506.98 453 607 605 600 564 484 3 4 3 3 4 4 68783 11346 2185 10921 26496;26497;26498 30751;30752;30753;30754;30755 30755 5 KVSVGPLDQVWVIANK Unmodified 1751.9934 0.99340506 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 1 10 0 1 77.811 77.811 3 0.00025974 24056 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.257 42.935 0 0 0 29.762 44.743 58.419 0 0 0 28 46 56 0 0 0 1 1 1 5045 11347 2323 10922 26499 30756 30756 1 KVSYSHIQSK Unmodified 1175.6299 0.62987176 860;1464 P27546;A0A140T8T5;A0A0G2JDY5;E9PZ43;A0A0G2JFK3 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 1 10 0 1 37.187 37.187 4 0.0042504 6700 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.889 25.004 128.16 119.04 0 161.76 0 168.43 120 120 0 148 0 158 1 1 0 1 0 1 8107.3 11348 1464;860 10923 26500 30757 30757 1 KVTAAMGK Unmodified 804.45276 0.45275902 1698 P61358 Rpl27 60S ribosomal protein L27 yes yes 0 0 0 1 11 0 1 41.704 41.704 3 0.05073 8261 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.416 14.415 0 127.68 0 121.32 0 0 0 120 0 111 0 0 0 1 0 1 0 0 8100.7 11349 1698 10924 26501 30758 30758 1 KVTGTLDANR Unmodified 1073.5829 0.58292157 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 1 8.5 0.5 1 1 37.312 37.312 3 0.0037181 8064 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.488 37.648 436.84 430.08 516 175.31 582.31 322.79 412 440 510 176 575 312 2 2 2 1 2 1 38197 11350 2131 10925 26502;26503 30759;30760 30759 2 KVTHAVVTVPAYFNDAQR Unmodified 2015.0589 0.058858868 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 10 0 1 54.626 54.626 4 0.011651 13571 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.237 26.293 49.128 45.631 0 0 0 29.848 46 46 0 0 0 28 1 1 0 0 0 1 3303.3 11351 1419 10926 26504 30761 30761 1 KVTLMEQLTK Unmodified 1189.674 0.67404476 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 1 10 0 1 62.005 62.005 3 0.0014237 16937 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.365 39.287 297.57 0 121.51 352.39 288.93 313.69 278 0 120 334 302 302 2 0 1 2 2 2 14199 11352 2513 10927 26505 30762;30763 30762 2 KVTQLDLDGPK Unmodified 1212.6714 0.67140222 1987 Q3UHX2 Pdap1 28 kDa heat- and acid-stable phosphoprotein yes yes 0 0 0 1 8 0 1 54.021 54.021 3 0.0013837 15724 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.644 29.64 99.171 0 103.92 133.54 125.21 135.01 93 0 102 130 130 130 1 0 1 1 1 1 6997.2 11353 1987 10928 26506 30764 30764 1 KVTTAPGR Unmodified 828.48175 0.48175096 408 A0A338P6G6;Q3TE85;A0A338P6E8;P17095 Hmga1 High mobility group protein HMG-I/HMG-Y yes no 0 0 0 1 9 0 1 29.297 29.297 3 0.025744 4706 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.426 0.1394 95.891 0 114.08 124.36 0 157.77 90 0 111 120 0 148 1 0 1 1 0 1 5913.5 11354 408 10929 26507 30765 30765 1 KVTVEDLFSEDFK Unmodified 1555.777 0.77698951 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 1 7 0 1 77.779 77.779 3 0.022273 27636 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.746 25.686 60.088 0 0 0 38.702 0 56 0 0 0 37 0 1 0 0 0 1 0 3557.9 11355 2322 10930 26508 30766 30766 1 KVVDNTTAK Unmodified 974.53966 0.53965977 3040 Q9D1G1 Rab1b Ras-related protein Rab-1B yes yes 0 0 0 1 10.5 2.5 1 1 37.058 37.058 3 0.0015938 9798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.937 61.373 107.92 117.78 156.71 287.84 190.55 191.77 102 120 158 287 195 185 1 1 1 2 1 1 15661 11356 3040 10931 26509;26510 30767;30768 30768 2 KVVDYTTAK Unmodified 1023.5601 0.56006086 1742;2065 P62821;Q5SW88;Q5SW87 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 1 11 2 1 1 45.349 45.349 3 0.0006797 11146 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.31 66.641 0 217.06 116.56 288.68 263.01 368.79 0 204 111 275 269 353 0 1 1 2 1 2 42886 11357 1742;2065 10932 26511;26512 30769;30770 30769 2 KVVFAVPK Unmodified 886.56402 0.56402403 125 A0A0N4SWH0;Q4VBG2;A0A0R4J0S6;E9PZ12;A0A0N4SUZ0;Q6RHR9 Magi1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 yes no 0 0 0 1 12 0 1 56.245 56.245 3 0.014493 12688 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.248 45.08 93.306 90.805 110.98 71.958 122.81 135.08 88 93 111 74 125 130 1 1 1 1 1 1 8297.9 11358 125 10933 26513 30771 30771 1 KVVFSTGSYPR Unmodified 1239.6612 0.66117189 1774 P63137 Gabrb2 Gamma-aminobutyric acid receptor subunit beta-2 yes yes 0 0 0 1 11 0 1 49.029 49.029 3 0.0009064 11194 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.352 67.72 0 0 0 93 0 0 0 0 0 93 0 0 0 0 0 1 0 0 7769.2 11359 1774 10934 26514 30772 30772 1 KVVGCSCVVVK Unmodified 1233.6573 0.65734884 1013 Q6ZWZ6;F7AEH4;A0A1W2P7A1;P63323 Rps12 40S ribosomal protein S12 yes no 0 0 0 1 10.5 0.5 1 1 47.69 47.69 3 0.00017366 10618 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.417 64.545 69.146 0 100.69 87.848 124.13 75.342 65 0 97 88 125 74 1 0 1 1 1 1 15274 11360 1013 10935 26515;26516 30773;30774 30774 2 KVVLPSLACLR Unmodified 1254.7482 0.74821276 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 1 6.5 5.5 1 1 65.377 65.377 3 5.9229E-06 15847 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.25 82.531 130.49 0 70.083 90.719 46.477 47.71 122 0 65 83 46 46 2 0 1 1 1 1 26556 11361 3373 10936 26517;26518 30775;30776 30776 2 KVVVCDNGTGFVK Deamidation (N) 1422.7177 0.71770049 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 1 0 1 7.75 0.829 2 1 1 56.559 56.559 3;4 0.0048103 16985 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.337 55.918 78.789 183.84 149.64 178.92 182.53 234.12 74 177 149 175 186 223 2 3 2 4 3 3 32863 11362 1690 10937 26519;26520;26521;26522 30777;30778;30779;30780 30779 653 4 KVVVEQLNLLVK Unmodified 1380.8704 0.87043638 2822 Q924M7 Mpi Mannose-6-phosphate isomerase yes yes 0 0 0 1 11.5 0.5 1 1 73.383 73.383 3;4 5.0937E-05 21433 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.618 74.638 119.1 59.584 0 49.466 43.177 186.38 111 56 0 46 46 176 1 1 0 1 1 2 15370 11363 2822 10938 26523;26524 30781;30782 30781 2 KVVVSQTK Unmodified 887.54402 0.54401687 1333 P09405;A0A087WRM5 Ncl Nucleolin yes no 0 0 0 1 10 0 1 39.344 39.344 3 0.0037769 7477 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.52 63.188 262.56 193.03 251.1 0 335 235.62 247 202 244 0 328 230 1 1 1 0 1 1 23024 11364 1333 10939 26525 30783 30783 1 KVWFPHELDGQGAR Unmodified 1638.8267 0.82667409 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 9 0 1 54.562 54.562 4 0.014211 15257 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.621 28.994 78.457 62.094 106.24 0 93.965 96.457 74 65 102 0 93 93 1 1 1 0 1 1 7529.8 11365 510 10940 26526 30784 30784 1 KVWIGIK Unmodified 842.53781 0.53780928 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 1 0 2 62.199 62.199 3 0.015165 20526 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.472 25.644 380.71 403.65 413.62 256.74 103.76 560.95 359 410 417 249 102 529 2 2 2 1 1 2 35407 11366 1554 10941 26527;26528 30785;30786 30785 2 KWDTCAPEVILHAVGGK Unmodified 1879.9615 0.96145301 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 1 8 0 1 72.629 72.629 4 0.0009826 24646 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.049 30.318 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 0 5405.1 11367 255;3362 10942 26529 30787 30787 1 KWENPPPSNAGLEDFER Unmodified 1984.9279 0.92790427 1793 P68181;H6TMF5 Prkacb cAMP-dependent protein kinase catalytic subunit beta yes no 0 0 0 1 6 0 1 59.317 59.317 3 0.0019576 19782 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.52 39.348 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11368 1793 10943 26530 30788 30788 1 KWETPSQNTAQLDQFDR Unmodified 2062.9708 0.97083172 1310 P05132 Prkaca cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 0 1 10 3 1 1 57.507 57.507 3 0.00028144 18053 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.145 39.815 0 29.35 26.42 47.477 65.177 18.394 0 28 28 46 65 19 0 1 1 1 1 1 4594.1 11369 1310 10944 26531;26532 30789;30790 30789 2 KWPLYLSTK Unmodified 1134.6437 0.64373091 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 1 1 0 1 67.395 67.395 3 0.0023927 22644 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.958 66.564 98.46 139.5 105.19 135.82 0 127.92 93 139 111 130 0 120 1 1 1 1 0 1 22819 11370 1618 10945 26533 30791 30791 1 KWQAIYK Unmodified 935.52289 0.52288749 143 A0A0R4IZW8;O88456;A0A0R4J1C2 Capns1 Calpain small subunit 1 yes no 0 0 0 1 12 0 1 53.664 53.664 3 0.044681 11591 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.757 38.656 160.04 0 152.97 142.81 0 0 150 0 148 139 0 0 1 0 1 1 0 0 11600 11371 143 10946 26534 30792 30792 1 KWYDLMIQNK Unmodified 1337.6802 0.68019277 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 1 11.5 0.5 1 1 70.698 70.698 3 0.01688 20207 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.225 33.505 148.55 64.386 140.83 38.842 262.53 192.15 139 65 134 37 259 185 2 1 2 1 3 2 22115 11372 2469 10947 26535;26536 30793;30794;30795 30793 3 KWYIQAATSPK Unmodified 1291.6925 0.69247202 3378 Q9Z1L5 Cacna2d3 Voltage-dependent calcium channel subunit alpha-2/delta-3;Voltage-dependent calcium channel subunit alpha-2-3;Voltage-dependent calcium channel subunit delta-3 yes yes 0 0 0 1 6.5 5.5 1 1 57.801 57.801 3 2.8508E-08 12978 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.02 83.408 51.952 44.314 67.415 100.74 45.138 80.794 49 46 68 99 49 77 1 1 1 2 1 1 5763.6 11373 3378 10948 26537;26538 30796;30797 30797 2 KWYYNAAGFNK 2 Deamidation (N) 1362.6245 0.62445203 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 2 0 1 10 0 1 61.801 61.801 3 0.00085494 16798 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.03 48.832 63.646 58.311 74.011 50.235 58.313 62.296 60 60 74 51 60 60 1 1 1 1 1 1 3707.1 11374 2919 10949 26539 30798 30798 1022;1023 1 KWYYNAAGFNK Unmodified 1360.6564 0.65642086 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 12 0 1 59.985 59.985 3 0.0026486 14115 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.56 38.591 0 0 0 0 0 93 0 0 0 0 0 93 0 0 0 0 0 1 28186 11375 2919 10949 26540 30799 30799 1 KYAAELHLVHWNTK Unmodified 1708.9049 0.90492441 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 1 10.5 0.5 1 1 58.205 58.205 5 0.011074 15919 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.378 26.906 0 76.882 212.91 102.72 114.8 174.75 0 74 213 102 120 167 0 1 2 1 1 1 17272 11376 1296 10950 26541;26542 30800;30801 30800 2 KYAALYQPLFDK Unmodified 1455.7762 0.77620165 637 B7ZNL2;Q78ZA7;A0A140LJB5 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 1 11.3 0.471 2 1 70.117 70.117 3;4 0.00077674 20123 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.352 47.479 116.75 207.46 154.39 209.22 328.59 50.9 109 201 158 204 325 49 2 2 1 2 3 1 34656 11377 637 10951 26543;26544;26545 30802;30803;30804 30802 3 KYAPGYNAEVGDK Unmodified 1410.6779 0.67794416 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 1 7 0 1 47.478 47.478 3 4.242E-05 13360 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.21 59.025 54.495 45.269 0 29.725 46.751 0 51 46 0 28 46 0 1 1 0 1 1 0 3840.8 11378 2859 10952 26546 30805 30805 1 KYAVLYQPLFDK Unmodified 1483.8075 0.80750177 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 1 12 0 1 72.966 72.966 3 0.00048679 18868 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.466 50.933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11379 833 10953 26547 30806 30806 1 KYEATLEK Unmodified 980.51786 0.51786169 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 6.67 0.471 1 2 46.715 46.715 3;4 0.0068955 12986 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.735 18.128 808.44 886.82 973.26 402.21 1128.5 1016.7 763 900 969 419 1126 984 3 3 3 2 2 3 58181 11380 1321 10954 26548;26549;26550 30807;30808;30809 30809 3 KYEEIDNAPEER Unmodified 1491.6842 0.68415175 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 1 9 4 1 1 42.138 42.138 3 0.00058148 12066 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.031 52.763 157.64 146.71 71.666 54.977 104.17 99.138 148 149 74 56 102 93 2 2 1 1 1 1 21405 11381 2361 10955 26551;26552 30810;30811 30811 2 KYEMFAQTLQQSR Unmodified 1628.7981 0.79807608 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 1 10.5 0.5 1 1 59.519 59.519 3 0.00011824 15964 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.093 74.104 148.75 78.282 0 0 0 157.77 139 83 0 0 0 148 1 1 0 0 0 1 48471 11382 1875 10956 26553;26554 30812;30813 30812 2 KYFAQALK Unmodified 967.5491 0.54910224 2966 Q9CRD2 Emc2 ER membrane protein complex subunit 2 yes yes 0 0 0 1 12 0 1 54.491 54.491 3 0.00795 11944 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.313 51.186 0 160.4 143.35 160.72 182.54 165.35 0 153 148 158 187 160 0 1 1 1 1 1 11440 11383 2966 10957 26555 30814 30814 1 KYFNSYTLTGR Unmodified 1348.6776 0.67755023 2273 Q78IK2 Usmg5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 1 11.5 0.5 1 1 53.781 53.781 3 0.01041 13064 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.414 41.441 127.77 68.3 190.53 231.29 0 153.5 120 74 190 222 0 144 1 1 2 2 0 2 20718 11384 2273 10958 26556;26557 30815;30816 30815 2 KYGNANVWK Unmodified 1078.556 0.55597854 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 1 11.3 1.25 1 1 1 48.156 48.156 3 0.0026643 10864 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.213 52.782 355.64 214.29 279.35 261.01 346.69 404.78 334 222 282 260 352 389 3 2 2 2 2 3 65328 11385 1731;1787 10959 26558;26559;26560 30817;30818;30819 30818 3 KYGQPIQMK Unmodified 1091.5798 0.57975044 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 1 10 0 1 47.388 47.388 3 0.00040376 10689 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.05 79.526 0 43.859 49.573 66.831 66.973 62.049 0 42 51 65 69 60 0 1 1 1 1 1 4073.9 11386 1581 10960 26561 30820 30820 1 KYHISALYVVDLK Unmodified 1547.8712 0.87116466 2219 Q6P5E4;E9Q4X2 Uggt1;Uggt2 UDP-glucose:glycoprotein glucosyltransferase 1 yes no 0 0 0 1 8 0 1 52.612 52.612 4 0.024433 15235 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.113 11.481 302.84 238.49 296.89 218.06 250.03 286.02 285 248 298 220 258 275 1 1 1 1 1 1 20289 11387 2219 10961 26562 30821 30821 1 KYHNVGLSK Unmodified 1044.5716 0.5716286 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;F6SHF3;F7A465 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 1 11 0 1 38.851 38.851 4 0.011182 7141 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.683 26.255 0 0 0 120 0 0 0 0 0 120 0 0 0 0 0 1 0 0 12083 11388 2079 10962 26563 30822 30822 1 KYIEDAIGESAK Unmodified 1322.6718 0.67179615 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 1 9 2.94 1 1 1 57.818 57.818 3 0.00054034 17757 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.91 30.282 315.19 125.27 366.79 330.19 168.7 237.72 296 130 361 325 167 223 2 1 3 3 1 2 30739 11389 1944 10963 26564;26565;26566 30823;30824;30825 30824 3 KYIPGTK Unmodified 805.46979 0.46978929 1753 P62897;CON__P62894;P00015 Cycs;Cyct Cytochrome c, somatic;Cytochrome c, testis-specific yes no 0 0 0 1 11 0 1 43.791 43.791 3 0.034128 9173 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.038 22.225 764 0 0 0 0 0 764 0 0 0 0 0 1 0 0 0 0 0 178050 11390 1753 10964 26567 30826 30826 1 KYITQSGYFVK Unmodified 1332.7078 0.70778773 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 1 11.5 0.5 1 1 57.189 57.189 3 9.5616E-05 14367 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.756 65.117 113.27 248.76 320 241.26 396.14 142.63 107 246 320 245 394 139 1 2 2 2 2 1 33062 11391 1625 10965 26568;26569 30827;30828 30827 2 KYMLSVDNLK Unmodified 1209.6427 0.64274463 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 10 0 1 62.245 62.245 3 0.0017392 17066 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.676 38.048 186.24 160.07 302.6 257.26 181.69 0 176 167 300 255 185 0 1 1 1 1 1 0 19945 11392 118;1534 10966 26570 30829 30829 1 KYNLGAPVAGTCYQAEWDDYVPK Unmodified 2644.2268 0.22678841 1806 P70296;D3Z1V4 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 1 7.67 0.471 1 2 72.768 72.768 3;4 2.1339E-18 24509 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.21 95.016 137.65 89.887 0 161.86 53.102 97.623 130 92 0 149 56 93 3 2 0 2 1 2 30410 11393 1806 10967 26571;26572;26573 30830;30831;30832 30831 3 KYNPTWHCIVGR Unmodified 1529.7562 0.75615168 1776;3031 P63168;Q80ZS7;Q9D0M5 Dynll1;BC048507;Dynll2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic no no 0 0 0 1 11 0.816 1 1 1 48.285 48.285 4 0.00016564 10689 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.633 63.494 187.75 59.809 329.86 465.8 281.87 260.59 176 60 322 449 287 252 2 1 2 3 2 2 65845 11394 1776;3031 10968 26574;26575;26576 30833;30834;30835 30834 3 KYNTDCVQGLTHSK Unmodified 1649.7832 0.78315429 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 9.17 1.95 1 2 1 1 1 44.499 44.499 3;4 2.4052E-11 10566 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.77 92.125 736.32 1205.7 1547.9 789.42 1270.7 897.74 692 1185 1524 786 1279 859 4 6 5 3 6 5 237300 11395 106 10969 26577;26578;26579;26580;26581;26582 30836;30837;30838;30839;30840;30841;30842 30840 7 KYPICNSPK Unmodified 1105.559 0.559015 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 1 10 0.816 1 1 1 43.154 43.154 3 0.00084246 9022 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.568 61.275 237.17 377.67 654.03 473.47 262.65 413.58 224 379 646 469 273 395 1 2 3 2 1 2 112040 11396 644 10970 26583;26584;26585 30843;30844;30845 30844 3 KYPNMFK Unmodified 926.46841 0.46840908 1040 F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 0 0 0 1 11 0 1 51.099 51.099 3 0.047989 12093 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.915 41.785 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11397 1040 10971 26586 30846 30846 1 KYPNVFK Unmodified 894.49634 0.49633839 2298 Q80SW1;D3Z2Q0 Ahcyl1 Putative adenosylhomocysteinase 2 yes no 0 0 0 1 13 0 1 50.515 50.515 3 0.036901 16575 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.594 37.185 0 318.44 363.42 351.23 339.21 313.32 0 305 368 347 350 303 0 1 1 1 1 1 19641 11398 2298 10972 26587 30847 30847 1 KYPSLANR Unmodified 947.51886 0.51886475 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 10 0 1 39.08 39.08 3 0.049751 7376 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.722 21.91 219.98 163.45 218.83 259.13 289.52 208.14 207 171 223 254 295 203 1 1 1 1 1 1 34803 11399 815;2590 10973 26588 30848 30848 1 KYPYHLMLQK Unmodified 1319.706 0.70601359 459 Q7TMY8;A2AFQ0;F6XP90 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 12 0 1 55.07 55.07 4 0.018174 12242 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.261 24.025 59.76 65.13 0 80.882 0 78.884 56 65 0 74 0 74 1 1 0 1 0 1 1379 11400 459 10974 26589 30849 30849 1 KYQILNNEVFAILNK Unmodified 1806.004 0.003969751 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 1 11.5 0.5 1 1 85.51 85.51 3;4 0.00019549 26758 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.944 67.869 39.701 28 0 0 0 39.442 37 28 0 0 0 37 1 1 0 0 0 1 8669.4 11401 2057 10975 26590;26591 30850;30851 30850 2 KYTEQITNEK Unmodified 1252.6299 0.62993134 2892 Q9CPP6 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 0 0 0 1 7 0.707 1 2 1 44.966 44.966 3;4 0.0018747 11287 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.522 38.878 628.99 404.39 343.76 754.95 89.643 513.39 590 419 358 711 92 484 3 2 1 4 1 3 22254 11402 2892 10976 26592;26593;26594;26595 30852;30853;30854;30855 30855 4 KYVIVSSK Unmodified 922.54877 0.54876789 347 F8VPK5;A0A1Y7VMN0;P70336;A0A1Y7VLD1 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 1 12 0 1 48.282 48.282 3 0.0159 9631 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.614 46.055 0 115.98 127.27 144.34 0 157.77 0 111 130 139 0 148 0 1 1 1 0 1 8843.9 11403 347 10977 26596 30856 30856 1 KYVSQYYPK Unmodified 1174.6023 0.60226003 1917 Z4YKA3;Z4YKB8;Q3TEA8;A2AM65 Hp1bp3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 1 11 0 1 48.92 48.92 3 0.01062 11167 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 46.861 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 0 0 5181.9 11404 1917 10978 26597 30857 30857 1 LAAAFAVSR Unmodified 904.51305 0.51305109 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 11 0 1 58.731 58.731 2 0.0058306 15069 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.241 51.679 0 0 0 0 169 0 0 0 0 0 169 0 0 0 0 0 1 0 52180 11405 2834 10979 26598 30858 30858 1 LAAAILGGVDQIHIKPGAK Unmodified 1871.0993 0.09926712 1522 P35550 Fbl rRNA 2'-O-methyltransferase fibrillarin yes yes 0 0 0 1 11 0 1 74.392 74.392 4 1.4134E-07 21972 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.859 78.592 48.695 64.933 56.451 0 0 0 46 65 56 0 0 0 1 1 1 0 0 0 9583.1 11406 1522 10980 26599 30859 30859 1 LAAAILGGVDQIHIKPK Unmodified 1743.0407 0.040689608 2330 Q80WS3 Fbll1 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 yes yes 0 0 0 1 12 0 1 75.531 75.531 4 3.7105E-06 19922 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.764 65.106 49.063 0 49.525 0 0 0 46 0 46 0 0 0 1 0 1 0 0 0 6412.8 11407 2330 10981 26600 30860 30860 1 LAAAYGMK Unmodified 823.42621 0.42620992 2402 Q8BHC1 Rab39b Ras-related protein Rab-39B yes yes 0 0 0 0 10 0 1 55.64 55.64 2 0.0066853 14041 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.74 63.609 39.241 0 77.392 55.64 50.79 0 37 0 74 56 51 0 1 0 1 1 1 0 4138.5 11408 2402 10982 26601 30861 30861 1 LAAAYNLLQHGITNLCVIGGDGSLTGANIFR Unmodified 3228.6714 0.671366 1357 P12382;A0A1W2P7T1 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 0 13 0 1 98.141 98.141 4 0.014721 39440 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 26.845 10.704 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 4445.4 11409 1357 10983 26602 30862 30862 1 LAACFLDSMATLGLAAYGYGIR Unmodified 2333.1548 0.15480944 2555;3331;1969 Q8CI94;Q9WUB3;Q3UEJ6;Q9ET01 Pygb;Pygm;Pygl Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form no no 0 0 0 0 13 0 1 111.96 111.96 3 1.4311E-18 44504 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.56 101.88 0 5.2056 6.8416 9.4292 0 11.726 0 5 7 9 0 11 0 1 1 1 0 1 2922.8 11410 2555;3331;1969 10984 26603 30863 30863 1 LAACVNLIPQITSIYEWK Unmodified 2118.1183 0.11834758 793 D5MCW4;Q9CQ89 Cuta Protein CutA yes no 0 0 0 0 11 1.22 2 1 1 97.379 97.379 3;4 3.59E-07 31841 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.754 58.096 9.657 0 24.41 20.767 9.414 14 9 0 24 19 9 14 1 0 2 1 1 1 10217 11411 793 10985 26604;26605;26606;26607 30864;30865;30866;30867 30864 4 LAADCAHELR Unmodified 1154.5502 0.55024123 2851 Q99L04 Dhrs1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 0 4 0 1 38.762 38.762 3 0.0025068 11005 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.466 44.198 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2050.2 11412 2851 10986 26608 30868 30868 1 LAADVGK Unmodified 672.38064 0.38063993 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 8.5 2.69 1 1 1 1 48.224 48.224 2;3 0.0095859 14604 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.847 19.383 4409.4 2857.9 3093.5 2523 2418.5 3679 4140 3014 3095 2507 2529 3516 4 4 3 3 3 4 467350 11413 1585;1607 10987 26609;26610;26611;26612 30869;30870;30871;30872 30869 4 LAAEDATNEK Unmodified 1060.5037 0.50366819 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 5.83 3.34 1 2 1 1 1 44.02 44.02 2;3 2.9423E-11 13438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 163.16 104.18 892.07 412.21 1052.8 737.01 410.07 898.61 838 426 1019 734 416 852 6 5 5 5 3 5 179530 11414 1329 10988 26613;26614;26615;26616;26617;26618 30873;30874;30875;30876;30877;30878;30879 30875 7 LAAENHCLR Unmodified 1082.5291 0.52911186 1839 P84309 Adcy5 Adenylate cyclase type 5 no no 0 0 0 0 5 0 1 33.646 33.646 3 0.063346 8059 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.276 14.719 29.605 57.163 25.421 29.089 0 0 28 56 28 28 0 0 1 1 1 1 0 0 825 11415 1839 10989 26619 30880 30880 1 LAAFGQLHK Unmodified 983.55525 0.55525025 306 Q45VK5;A0A1L1STE4;Q9Z1X4 Ilf3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 11 0 1 56.625 56.625 3 0.0017934 14270 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.478 38.919 189.92 0 0 0 260.2 281.46 177 0 0 0 258 271 1 0 0 0 1 1 24867 11416 306 10990 26620 30881 30881 1 LAAFLETTFLK Unmodified 1252.7067 0.7067251 2728 Q91V36;A0A0R4J002 Nrbp2 Nuclear receptor-binding protein 2 yes no 0 0 0 0 11.7 0.471 1 2 96.939 96.939 2;3 6.0104E-05 27702 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.965 66.544 39.519 19.21 14.381 24.282 0 20.254 37 19 14 23 0 19 2 1 1 2 0 1 6587.3 11417 2728 10991 26621;26622;26623 30882;30883;30884 30883 3 LAAFYGV Unmodified 739.39048 0.39047634 2863;2365 Q99LG2;E9PV58;Q8BFY9 Tnpo2;Tnpo1 Transportin-2;Transportin-1 no no 0 0 0 0 10.8 1.48 1 1 1 1 81.468 81.468 2 0.02741 25696 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.268 84.518 19 29.792 0 51.371 0 99.138 19 28 0 47 0 93 1 2 0 2 0 3 20955 11418 2863;2365 10992 26624;26625;26626;26627 30885;30886;30887;30888 30886 4 LAAGAESPQPASGNSPSEDDR Unmodified 2054.9141 0.9141047 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 3 0 1 42.62 42.62 3 2.1717E-07 13228 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.69 53.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11419 1388 10993 26628 30889 30889 1 LAAHPLNNR Unmodified 1004.5516 0.55156186 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 32.565 32.565 3 0.00043884 6013 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.909 72.116 98.92 51.198 102.63 93.472 109.54 66.164 93 56 102 93 111 65 1 1 1 1 1 1 7104.8 11420 570 10994 26629 30890 30890 1 LAAIQESGVER Unmodified 1171.6197 0.619701 2081 Q60692 Psmb6 Proteasome subunit beta type-6 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 51.001 51.001 2 5.8207E-08 16550 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.06 71.779 189.28 27.776 112.83 240.14 298.58 0 177 28 111 231 296 0 3 1 2 4 4 0 32701 11421 2081 10995 26630;26631;26632;26633 30891;30892;30893;30894 30891 4 LAAIVAK Unmodified 684.45341 0.45341094 1416 P19253;A0A1B0GSB2;A0A1B0GSQ6;A0A1B0GTA1;A0A1B0GS68;A0A140T8K2;A0A1B0GSL5;A0A1B0GSC2;A0A1B0GRH1;A0A1B0GT00;A0A1B0GSJ2 Rpl13a 60S ribosomal protein L13a yes no 0 0 0 0 10.5 0.5 1 1 59.524 59.524 2 0.028051 15992 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.839 42.894 146.58 409.37 252.09 241.52 115.15 253.62 139 398 250 231 120 241 2 3 2 2 1 2 64780 11422 1416 10996 26634;26635 30895;30896;30897 30895 3 LAALADLEDWEELEK Unmodified 1743.8567 0.85669639 1076 G3X8X7;Q920Q4 Vps16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 0 6 0 1 94.353 94.353 3 0.0028032 35713 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.31 34.434 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1403.3 11423 1076 10997 26636 30898 30898 1 LAALADQWQFLVQK Unmodified 1629.8879 0.88787736 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.55 4.72 3 2 3 1 2 93.622 93.622 2;3;4 3.4471E-29 37165 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 154.36 124.55 433.93 325.44 175.18 316.9 419.66 332.67 406 329 166 305 414 318 8 7 8 7 9 8 439270 11424 551 10998 26637;26638;26639;26640;26641;26642;26643;26644;26645;26646;26647 30899;30900;30901;30902;30903;30904;30905;30906;30907;30908;30909;30910;30911;30912;30913;30914 30911 16 LAALNPESNTSGLDIFAK Unmodified 1859.9629 0.9628928 3382 Q9Z1Q5 Clic1 Chloride intracellular channel protein 1 yes yes 0 0 0 0 8 0 1 83.486 83.486 3 0.00017685 29690 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.499 38.768 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11425 3382 10999 26648 30915 30915 1 LAANDFFR Unmodified 952.47667 0.47666558 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q80X52;E9Q579;V9GWS2;A0A0J9YVJ3 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 10 2.16 1 1 1 64.466 64.466 2 0.0012571 23147 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 139.97 102.88 221.44 438.79 99.933 518.47 127.63 548.55 207 428 102 482 130 518 1 3 1 3 1 3 121700 11426 3075 11000 26649;26650;26651 30916;30917;30918 30918 3 LAANDFLR Unmodified 918.49232 0.49231565 3112 Q9DB41 Slc25a18 Mitochondrial glutamate carrier 2 yes yes 0 0 0 0 13 0 1 60.311 60.311 2 0.044487 21317 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.88 9.8691 0 48.944 0 0 104.74 56.707 0 46 0 0 102 56 0 1 0 0 1 1 6487.5 11427 3112 11001 26652 30919 30919 1 LAAQFIPK Unmodified 886.52764 0.52763852 1210 O35841 Api5 Apoptosis inhibitor 5 yes yes 0 0 0 0 10 0 1 65.664 65.664 2 0.0094408 18462 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.071 39.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11428 1210 11002 26653 30920 30920 1 LAAQNQER Unmodified 928.47264 0.47264284 801 E0CY19;E0CYS3;E0CXW0;E0CYU3;E0CZ08;E9Q4A0;Q9DCB4 Arpp21 cAMP-regulated phosphoprotein 21 yes no 0 0 0 0 5 0 1 28.863 28.863 2 0.010921 5878 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.531 49.813 14.837 13.567 19.669 0 19.051 23.974 14 14 19 0 19 23 1 1 1 0 1 1 2821 11429 801 11003 26654 30921 30921 1 LAASGEGGLQELSGHFENQK Unmodified 2070.997 0.99704647 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 6 0.707 1 2 1 63.015 63.015 3;4 2.7775E-23 21475 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 133.29 115.06 138.2 156.83 136.77 182.28 102.81 0 130 158 139 176 102 0 2 3 3 4 1 0 33786 11430 3267 11004 26655;26656;26657;26658 30922;30923;30924;30925 30924 4 LAATNALLNSLEFTK Unmodified 1604.8774 0.87737225 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 10.8 1.33 1 1 2 1 86.761 86.761 2;3 9.3678E-06 27549 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.54 83.626 89.21 45.674 146.49 18.442 84.851 156.41 84 46 139 19 83 149 3 1 3 1 1 4 33202 11431 1798 11005 26659;26660;26661;26662;26663 30926;30927;30928;30929;30930 30929 5 LACGVIGIAQ Unmodified 1000.5376 0.53755128 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 9.25 2.28 1 1 1 1 73.576 73.576 2 1.9683E-08 25070 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 146.58 125.07 366.24 141.61 182.37 293.08 240.46 164.57 343 148 177 279 241 157 6 4 3 5 3 2 285370 11432 1326 11006 26664;26665;26666;26667 30931;30932;30933;30934;30935;30936 30933 6 LACPAPTGK Unmodified 913.46914 0.46913736 130 A0A0N4SVB5;Q6PE13 Prrt3 Proline-rich transmembrane protein 3 yes no 0 0 0 0 8 0 1 45.377 45.377 2 0.0026671 11750 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.642 43.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11433 130 11007 26668 30937 30937 1 LADALQELR Unmodified 1027.5662 0.56620887 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 6 0 1 68.761 68.761 2 0.040992 24278 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.859 25.444 48.953 25.717 46.326 37.186 26.251 38.693 46 28 46 37 28 37 1 1 1 1 1 1 7658.3 11434 1580 11008 26669 30938 30938 1 LADAQSEAAMEEIEATVR Unmodified 1932.9099 0.90987095 187 A0A0R4J0T0;Q8K3A0 Hscb Iron-sulfur cluster co-chaperone protein HscB, mitochondrial yes no 0 0 0 0 3 0 1 78.291 78.291 3 0.00013132 29745 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.082 25.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11435 187 11009 26670 30939 30939 1 LADDVDLEQVANETHGHVGADLAALCSEAALQAIR Unmodified 3671.785 0.78495179 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 5.5 0.5 1 1 83.005 83.005 4 3.478E-07 30906 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.693 33.294 0 0 20.558 30.604 19.874 29.848 0 0 19 28 19 28 0 0 1 1 1 1 11409 11436 1875 11010 26671;26672 30940;30941 30941 2 LADFGLAR Unmodified 861.47085 0.47085192 78;308 A0A0G2JDL3;P49615;D3Z2T9;E9Q9E4;E9PZX7;E3W997;A0A1Y7VLM0;P11440;Q80YP0;P30285;Q64261;P97377;Q99J95;Q3V3A1;Q69ZA1;A0A1L1SUS7;Q04899;Q8K0D0;Q04735 Cdk5;Cdk1;Cdk4;Cdk15;Cdk3;Cdk6;Cdk2;Cdk9;Cdk13;Cdk18;Cdk17;Cdk16 Cyclin-dependent-like kinase 5;Cyclin-dependent kinase 1;Cyclin-dependent kinase 3;Cyclin-dependent kinase 4;Cyclin-dependent kinase 6;Cyclin-dependent kinase 2;Cyclin-dependent kinase 9;Cyclin-dependent kinase 15;Cyclin-dependent kinase 13;Cyclin-dependent kinase 18;Cyclin-dependent kinase 17;Cyclin-dependent kinase 16 no no 0 0 0 0 8.5 0.5 1 1 64.027 64.027 2 0.025072 20393 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.243 0 247.17 67.961 239.42 141.04 261.84 106.06 232 74 232 139 260 102 2 1 2 1 2 1 38194 11437 78;308 11011 26673;26674 30942;30943 30942 2 LADFGMCK Unmodified 940.41466 0.41465895 1388 P16054;P23298 Prkce;Prkch Protein kinase C epsilon type;Protein kinase C eta type yes no 0 0 0 0 8.5 0.5 1 1 63.529 63.529 2;3 0.010684 20246 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.492 0 197.11 26.528 211.18 156.34 142.38 203.81 185 28 204 157 148 195 2 1 2 2 1 1 14326 11438 1388 11012 26675;26676 30944;30945 30944 2 LADFGVLHR Unmodified 1026.5611 0.56106391 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8.5 0.5 1 1 58.223 58.223 3 0.00065178 17011 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.069 36.911 29.724 56.931 38.83 29.749 45.439 38.145 28 56 37 28 46 37 1 2 1 1 1 1 9165.6 11439 3032 11013 26677;26678 30946;30947 30947 2 LADFGVSAK Unmodified 906.48108 0.48108226 1225 O54988;O55098 Slk;Stk10 STE20-like serine/threonine-protein kinase;Serine/threonine-protein kinase 10 yes no 0 0 0 0 8 0 1 63.052 63.052 2 0.0016991 20009 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.161 26.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11440 1225 11014 26679 30948 30948 1 LADHFGGK Unmodified 843.4239 0.42390173 922 E9Q715;Q05CX5;Q7TNC4;D3Z765;A0A0R4J047;Q9CYI4 Luc7l2;Luc7l Putative RNA-binding protein Luc7-like 2;Putative RNA-binding protein Luc7-like 1 yes no 0 0 0 0 7 0 1 44.952 44.952 3 0.021066 12193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.17 21.798 0 58.346 74.083 55.777 54.017 58.155 0 56 74 56 56 56 0 1 1 1 1 1 2283.9 11441 922 11015 26680 30949 30949 1 LADIDKDGMLDDEEFALANHLIK Unmodified 2585.2683 0.26831888 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 1 6 0 1 82.661 82.661 4 4.9724E-15 30746 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.936 73.229 39.302 36.109 36.45 27.372 56.349 28.24 37 37 37 28 56 28 1 1 1 1 1 1 3118.1 11442 3271 11016 26681 30950 30950 1 LADLASDLLLQYLLQGGAR Unmodified 2029.1208 0.12079042 1898 Q0VGU4 Vgf yes yes 0 0 0 0 11.3 1.25 1 1 1 114.05 114.05 3 2.3743E-09 44826 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.221 41.871 0 0 7.574 0 5.23 0 0 0 7 0 5 0 0 0 1 0 1 0 3929 11443 1898 11017 26682;26683;26684 30951;30952;30953 30953 3 LADLFGWAHLANTYISVR Unmodified 2046.0687 0.068695273 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 12 0 1 95.187 95.187 3 0.0010438 27255 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.204 31.783 9.4843 19.366 12.608 29.853 14.329 9.1851 9 19 14 28 14 9 1 1 1 1 1 1 1866.2 11444 3274 11018 26685 30954;30955 30954 2 LADLFGWSQLIYNHITTR Unmodified 2147.1164 0.11637375 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3 Add1 Alpha-adducin yes no 0 0 0 0 13 0 1 99.174 99.174 3 0.020206 39995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 33.836 10.698 39.532 0 28.37 38.75 0 0 37 0 28 37 0 0 1 0 1 1 0 0 1347.4 11445 3276 11019 26686 30956 30956 1 LADLIER Unmodified 828.47052 0.47051757 1562 P47738;A0A0G2JEU1;A0A0G2JFQ0;D3YYF3 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 63.096 63.096 2 0.062135 21542 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.324 7.6476 147.62 125.86 149.77 46.457 121.25 184.16 139 130 148 46 120 176 2 2 2 1 1 2 22317 11446 1562 11020 26687;26688 30957;30958 30957 2 LADQCTGLQGFLVFHSFGGGTGSGFTSLLMER Unmodified 3389.6173 0.61728152 1313;1794 P05213;A0A2R8VHF3;P68369 Tuba1b;Tuba1a Tubulin alpha-1B chain;Tubulin alpha-1A chain no no 0 0 0 0 11.5 1.5 1 1 94.791 94.791 4 0.00034301 31028 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.472 29.569 49.358 0 0 69.827 64.782 0 46 0 0 65 65 0 1 0 0 2 2 0 7943 11447 1313;1794 11021 26689;26690 30959;30960 30959 2 LADQIFAYYK Unmodified 1230.6285 0.62847478 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 10 2.16 1 1 1 78.142 78.142 2;3 0.0016215 27198 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.679 56.416 29.637 95.654 77.71 98.46 25.623 102.67 28 93 78 93 28 97 1 3 2 2 1 3 17696 11448 2282;2057 11022 26691;26692;26693 30961;30962;30963 30961 3 LADVDKDGLLDDEEFALANHLIK Unmodified 2553.2962 0.29624819 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 0 0 0 1 6.5 0.5 1 1 83.021 83.021 4 4.342E-17 30871 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.03 84.825 0 0 58.545 45.954 44.364 103.77 0 0 56 46 46 102 0 0 1 1 1 2 6432 11449 3353 11023 26694;26695 30964;30965 30964 2 LADVYQAELR Unmodified 1176.6139 0.61388734 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 8 3.56 1 1 1 61.751 61.751 2;3 5.2866E-06 21651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.78 81.444 695.46 737.36 885.63 810.27 676.06 1312.4 655 751 896 799 725 1248 2 3 3 2 3 2 93544 11450 1304 11024 26696;26697;26698 30966;30967;30968 30966 3 LADYYPINSDFK Unmodified 1444.6874 0.68744622 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 7 0 1 73.429 73.429 2 0.0010542 25531 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.1 33.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11451 935 11025 26699 30969 30969 1 LAEDAPNFDGPAAEGQPGQK Unmodified 2010.9283 0.9282982 1022 F7CBP1;G3XA17;Q62448;F6TW20 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 4 0 1 59.939 59.939 3 0.0030633 21042 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.53 24.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1567.4 11452 1022 11026 26700 30970 30970 1 LAEDEAFQR Unmodified 1077.5091 0.50908792 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3.5 0.5 1 1 48.839 48.839 2 0.0071915 16152 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.934 54.599 138.19 0 218.56 32.945 54.737 137.02 130 0 204 37 56 130 2 0 2 1 1 2 10433 11453 3266 11027 26701;26702 30971;30972 30971 2 LAEEEHK Unmodified 854.4134 0.41339662 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 4 0 1 34.755 34.755 3 0.003258 9025 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.65 48.501 118.5 119.69 0 0 208.5 142.22 111 120 0 0 204 139 1 1 0 0 1 1 9380.7 11454 1491 11028 26703 30973 30973 1 LAEEVPVDVASYLYTGDFHQLK Unmodified 2493.2428 0.24275605 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 6 0 1 87.517 87.517 4 0.0012741 32823 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.912 33.055 29.928 0 19.534 19.603 0 0 28 0 19 19 0 0 1 0 1 1 0 0 1314.9 11455 2499 11029 26704 30974 30974 1 LAEIHGVPR Unmodified 990.56106 0.56106391 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 8.67 3.09 1 1 1 44.018 44.018 3 0.0031148 13129 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.735 49.952 99.789 48.944 0 90.136 89.104 136.04 93 46 0 84 92 130 2 1 0 2 2 3 21762 11456 207 11030 26705;26706;26707 30975;30976;30977 30977 3 LAEISDVWEEMK Unmodified 1448.6857 0.68573166 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 86.471 86.471 2;3 1.0078E-06 32357 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.937 65.339 80.342 55.893 17.911 80.205 37.328 0 75 56 19 75 37 0 2 2 1 3 1 0 11412 11457 2148 11031 26708;26709;26710;26711 30978;30979;30980;30981 30979 4 LAELEEFINGPNNAHIQQVGDR Deamidation (N) 2464.1983 0.19826548 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 5.11 0.737 2 4 3 77.329 77.329 3;4 8.6887E-19 29879 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.39 100.78 150.17 122.27 235.61 94.758 75.237 140.7 141 122 228 93 75 134 6 5 8 4 2 6 80466 11458 2185 11032 26712;26713;26714;26715;26716;26717;26718;26719;26720 30982;30983;30984;30985;30986;30987;30988;30989;30990;30991 30987 862;863;864 10 LAELEEFINGPNNAHIQQVGDR Unmodified 2463.2142 0.21424989 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.4 2.87 1 2 1 1 77.942 77.942 3;4 1.0908E-16 27613 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.52 91.386 118.87 149.59 186.48 164.23 93.581 187.35 112 149 186 159 94 177 4 5 5 5 4 5 63206 11459 2185 11032 26721;26722;26723;26724;26725 30992;30993;30994;30995;30996;30997;30998 30996 7 LAELEEFINGPNNAHIQQVGDR 2 Deamidation (N) 2465.1823 0.18228106 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 2 0 0 13 0 1 75.057 75.057 3 8.968E-08 28498 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.87 47.722 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 15638 11460 2185 11032 26726 30999 30999 862;863;864 1 LAELEGALQK Unmodified 1070.5972 0.59717465 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385;P97861;E9Q1Y9;CON__Q61726;Q9ERE2 Krt86;5430421N21Rik;Krt81 Keratin, type II cuticular Hb6;Keratin, type II cuticular Hb1 no no 0 0 0 0 8.2 2.48 1 2 1 1 71.772 71.772 2;3 2.1805E-05 24759 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.55 38.322 69.349 96.622 44.496 140.57 60.432 811.63 65 94 46 131 74 763 2 4 2 4 2 4 31770 + 11461 648 11033 26727;26728;26729;26730;26731 31000;31001;31002;31003;31004 31001 5 LAELQAK Unmodified 771.44905 0.44905385 1645 P56812 Pdcd5 Programmed cell death protein 5 yes yes 0 0 0 0 8 0 1 53.732 53.732 2 0.04575 15567 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.674 21.998 78.433 71.742 102.03 81.6 161.52 0 74 74 102 83 158 0 1 1 1 1 1 0 6862.7 11462 1645 11034 26732 31005 31005 1 LAEMLPSVSSILT Unmodified 1359.732 0.73195357 3203 Q9JHK4;A0A2K6EDL0 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 0 9 0 1 101.27 101.27 2 0.0003764 36008 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.649 68.755 0 0 0 6.4455 5.9799 0 0 0 0 6 6 0 0 0 0 1 1 0 1386.5 11463 3203 11035 26733 31006 31006 1 LAEMPADSGYPAYLGAR Oxidation (M) 1796.8403 0.84033482 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 1 0 5 0 1 62.095 62.095 3 0.0011137 21672 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.606 33.468 49.358 0 0 0 45.451 77.587 46 0 0 0 46 74 1 0 0 0 1 1 3524.8 11464 1596 11036 26734 31007 31007 108 1 LAEMPADSGYPAYLGAR Unmodified 1780.8454 0.8454202 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 69.028 69.028 2;3 6.5369E-18 23557 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.77 108.38 87.587 90.189 252.05 88.465 196.32 104.45 83 93 242 92 195 102 2 2 3 2 3 2 61577 11465 1596 11036 26735;26736;26737;26738;26739 31008;31009;31010;31011;31012 31010 5 LAEPSQMLK Unmodified 1015.5372 0.53721693 1878 Q02248;E9Q6A9;D3YUH4 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 7.5 0.5 1 1 59.513 59.513 2;3 0.018062 18330 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.775 31.627 69.123 33.434 76.144 35.236 35.434 48.025 65 37 74 37 37 46 1 1 1 1 1 1 3457.4 11466 1878 11037 26740;26741 31013;31014 31014 2 LAEPYGK Unmodified 776.40685 0.40685468 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 7 1 1 1 49.172 49.172 2 0.036239 14954 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.297 24.194 197.69 140.84 197.44 91.999 213.25 155 186 148 195 93 213 148 2 2 2 1 2 1 11373 11467 2602 11038 26742;26743 31015;31016 31015 2 LAEQAER Unmodified 815.41373 0.41373097 1715;1005;1773;1797;1706;2944;1256 Q9CQV8;A2A5N1;P68510;P63101;A0A2I3BQ03;D3YXN6;D3YXF4;D3YW45;F6VW30;P68254;F6YY69;O70456;P61982;P62259;D6REF3 Ywhab;Ywhah;Ywhaz;Ywhaq;Sfn;Ywhag;Ywhae 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 0 6.2 3.54 1 1 1 1 1 31.95 31.95 2 0.00147 7862 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.82 78.983 14159 11229 9870.5 12485 10890 15138 13303 11592 9919 12125 11123 14466 8 7 4 5 6 7 3470400 11468 2944;1797;1773;1005;1256;1706;1715 11039 26744;26745;26746;26747;26748 31017;31018;31019;31020;31021;31022;31023;31024 31019 8 LAEQIATLCATLK Unmodified 1430.7803 0.78030075 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 8.8 4.12 1 1 1 1 1 82.448 82.448 2;3 1.2385E-21 26224 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.52 114.77 406.29 260.22 171.52 358.08 291 518.65 380 262 167 334 292 492 5 5 4 5 6 7 194500 11469 1160 11040 26749;26750;26751;26752;26753 31025;31026;31027;31028;31029;31030;31031;31032;31033 31030 9 LAETQEVPQEAEPVEELMK Unmodified 2169.0511 0.051115457 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 3 0 1 75.001 75.001 3 0.065179 28227 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 26.237 17.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11470 3322 11041 26754 31034 31034 1 LAETVFNFQEK Unmodified 1324.6663 0.66631685 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7.5 0.5 1 1 74.82 74.82 3 4.8624E-05 26183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.229 62.821 99.104 55.551 68.073 46.221 27.961 98.34 93 56 65 46 28 93 2 1 1 1 1 2 14075 11471 3204 11042 26755;26756 31035;31036 31035 2 LAEVALAYAK Unmodified 1047.5964 0.59644637 1343 P10518 Alad Delta-aminolevulinic acid dehydratase yes yes 0 0 0 0 11 2 1 1 72.411 72.411 2;3 0.0013247 23958 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.1 43.427 69.323 83.638 0 0 0 49.036 65 83 0 0 0 46 1 1 0 0 0 1 3316.8 11472 1343 11043 26757;26758 31037;31038 31037 2 LAEWVAIQSVSAWPEK Unmodified 1812.941 0.94103514 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 13 0 1 90.283 90.283 3 0.00018512 35829 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.513 39.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11473 3038 11044 26759 31039 31039 1 LAEYTDLMLK Unmodified 1195.6159 0.61586118 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 9.33 2.62 1 1 1 78.345 78.345 2;3 2.1381E-05 29903 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.7 52.822 29.622 55.828 145.25 37.031 67.99 99.138 28 56 139 37 65 93 1 2 3 1 1 2 12986 11474 1359 11045 26760;26761;26762 31040;31041;31042 31042 3 LAFIAHPK Unmodified 895.52797 0.52797287 981 F6QL70;Q5M8M8;P47915;A0A1L1SUN1;A0A1L1SS27;W4VSN7 Gm17669;Rpl29;Gm3550 60S ribosomal protein L29 yes no 0 0 0 0 7.33 4.5 1 1 1 53.201 53.201 3 0.0032791 12897 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.297 48.882 0 281.75 75.995 230.38 187.11 78.884 0 266 74 214 189 74 0 2 1 1 1 1 23424 11475 981 11046 26763;26764;26765 31043;31044;31045;31046 31046 4 LAFLNVQAAEEALPR Unmodified 1640.8886 0.88860564 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9.5 0.5 1 1 83.738 83.738 3 4.1725E-23 26580 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.29 97.37 40.774 0 0 60.888 17.023 59.21 38 0 0 56 19 56 2 0 0 2 1 2 15755 11476 2179 11047 26766;26767 31047;31048;31049 31049 3 LAFLSSK Unmodified 764.44324 0.44324019 2514 Q8CAB8 Gatsl2 GATS-like protein 2 yes yes 0 0 0 0 12 0 1 66.668 66.668 2 0.026917 16518 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.942 43.224 138.53 0 161.22 202.88 208.62 172.07 130 0 158 198 214 167 1 0 1 1 1 1 10557 11477 2514 11048 26768 31050 31050 1 LAFYDLQEADLDKEFR Unmodified 1971.9578 0.95780742 628 B2RXT3 Ogdhl yes yes 0 0 0 1 6.5 0.5 1 1 78.176 78.176 3 1.4932E-05 27796 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.191 66.548 88.535 0 88.099 28.308 0 99.138 83 0 83 28 0 93 2 0 2 1 0 2 12853 11478 628 11049 26769;26770 31051;31052 31052 2 LAGAFSSDTSFF Unmodified 1248.5663 0.56626845 274 A0A1D5RLG3;Q80UJ7 Rab3gap1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 0 7 0 1 92.455 92.455 2 0.0027923 34199 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.252 51.673 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1353.8 11479 274 11050 26771 31053 31053 1 LAGDPGEDPR Unmodified 1025.4778 0.47778779 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 6.67 4.5 1 1 1 39.07 39.07 2 1.8212E-05 11681 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.61 65.122 207.05 117.04 121.4 181.32 202.73 162.64 194 120 120 176 204 158 2 2 1 3 2 2 48477 11480 1670 11051 26772;26773;26774 31054;31055;31056 31054 3 LAGEGQAIDGAELSK Unmodified 1457.7362 0.73618733 2519 Q8CBE3;H3BJR7;H3BJS1;H3BK66;Q05BF4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 5 0 1 60.152 60.152 3 1.8656E-07 20847 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.35 81.49 69.47 0 46.196 146.42 146.48 46.695 65 0 46 139 148 46 2 0 1 2 2 1 5528.1 11481 2519 11052 26775 31057;31058 31058 2 LAGESESNLR Unmodified 1074.5306 0.53055165 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 4.5 0.5 1 1 40.61 40.61 2 3.1659E-11 11803 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 162.59 83.77 0 58.868 282.63 231.32 346.06 0 0 56 274 233 341 0 0 1 2 2 2 0 56427 11482 1875 11053 26776;26777 31059;31060 31059 2 LAGGAAIK Unmodified 699.42792 0.42792448 668 D3YTQ3 Hnrnpdl yes yes 0 0 0 0 9 0 1 48.188 48.188 2 0.041747 12395 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.994 2.2171 0 331.21 490.83 0 0 491.43 0 319 472 0 0 461 0 1 1 0 0 1 119530 11483 668 11054 26778 31061 31061 1 LAGGDWFTSR Unmodified 1108.5302 0.53015772 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 10 2.16 1 1 1 66.383 66.383 2 3.0526E-11 21725 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.88 125.33 0 187.26 266.99 785.39 864.83 904.87 0 176 256 748 891 872 0 1 1 3 3 3 128020 11484 2272 11055 26779;26780;26781 31062;31063;31064 31062 3 LAGGLQK Unmodified 685.41227 0.41227441 1878 Q02248;E9Q6A9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 9 0 1 48.824 48.824 2 0.027566 12498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.957 28.964 0 164.16 236.31 230.75 0 0 0 158 237 224 0 0 0 1 1 1 0 0 24746 11485 1878 11056 26782 31065 31065 1 LAGGQVE Unmodified 672.34425 0.34425443 1678 P60840 Ensa Alpha-endosulfine yes yes 0 0 0 0 4 0 1 45.597 45.597 2 0.022672 14172 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.229 56.75 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11486 1678 11057 26783 31066 31066 1 LAGIEER Unmodified 786.42357 0.42356738 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.5 0.5 1 1 45.017 45.017 2 0.035816 13592 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.635 0 402.31 86.634 478.01 401.6 320.02 469.5 378 93 465 399 339 449 2 1 2 2 2 2 63752 11487 2148 11058 26784;26785 31067;31068 31067 2 LAGPLHK Unmodified 734.44391 0.44390889 1934 Q3TPE9 Ankmy2 Ankyrin repeat and MYND domain-containing protein 2 yes yes 0 0 0 0 9 0 1 44.44 44.44 3 0.020269 10574 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.866 35.293 59.808 55.551 0 71.045 0 39.442 56 56 0 65 0 37 1 1 0 1 0 1 4955.5 11488 1934 11059 26786 31069 31069 1 LAGPQLVQMFIGDGAK Unmodified 1643.8705 0.87051274 463;14 A0A087WPH7;A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A no no 0 0 0 0 11.5 1.5 1 1 90.492 90.492 3 3.8288E-05 29577 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.497 70.91 39.296 38.421 124.71 83.286 0 69.29 37 37 121 83 0 65 1 1 2 2 0 1 7380.9 11489 14;463 11060 26787;26788 31070;31071 31070 2 LAGQFLEELR Unmodified 1174.6346 0.63462279 2014 Q61885;Q3UY21 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 7.5 0.5 1 1 75.399 75.399 2 0.0046654 25821 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.533 33.224 117.69 117.43 138.65 92.351 55.003 166.86 111 120 139 93 56 158 2 2 2 2 1 2 24716 11490 2014 11061 26789;26790 31072;31073 31073 2 LAGQFLEELRNPF Unmodified 1532.7987 0.798728 2014 Q61885;Q3UY21 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 1 10 2.16 1 1 1 90.205 90.205 3 0.00025236 35628 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.871 46.98 20.265 37 20.456 0 47.505 48.248 19 37 19 0 47 46 1 1 1 0 2 1 14854 11491 2014 11062 26791;26792;26793 31074;31075;31076 31076 3 LAGQIFLGGSIVR Unmodified 1329.7769 0.77687035 1402 P17563 Selenbp1 Selenium-binding protein 1 yes yes 0 0 0 0 8 4.97 1 1 1 75.7 75.7 2 0.00055982 22508 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.777 59.603 109.19 37.959 27.792 110.03 47.295 0 102 38 28 103 47 0 3 2 1 4 2 0 14755 11492 1402 11063 26794;26795;26796 31077;31078;31079;31080 31078 4 LAGTQPLEVLEAVQR Unmodified 1622.8992 0.89917033 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7.83 2.41 2 2 1 1 78.758 78.758 2;3 2.6557E-16 28018 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.61 105.73 147.77 71.565 170.68 195.85 181.59 193.09 139 74 167 187 186 186 4 2 3 4 5 5 121180 11493 1876 11064 26797;26798;26799;26800;26801;26802 31081;31082;31083;31084;31085;31086 31083 6 LAGVINFQRPK Unmodified 1241.7244 0.72444085 3097 Q9D8W5;B1AT36 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 1 6.5 5.5 2 2 59.588 59.588 3;4 7.9073E-05 13958 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.277 66.204 157.44 221.19 263.3 154.66 415.7 85.043 149 222 260 157 407 83 3 4 3 2 4 2 46621 11494 3097 11065 26803;26804;26805;26806 31087;31088;31089;31090 31090 4 LAGVTALSCWLPLR Unmodified 1555.8545 0.85446874 1146 J3QP56;P97823;D3YUG4;D3Z269 Lypla1 Acyl-protein thioesterase 1 yes no 0 0 0 0 7.8 5.56 2 2 1 92.755 92.755 2;3 2.181E-21 32639 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 131.13 103.47 59.752 21.432 46.401 48.216 38.702 52.234 56 21 44 45 37 49 4 2 3 2 1 3 7955.5 11495 1146 11066 26807;26808;26809;26810;26811 31091;31092;31093;31094;31095;31096 31093 6 LAHACGSDWIPVGSSGSK Unmodified 1827.8574 0.85738187 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 7.5 0.5 1 1 57.293 57.293 3 1.3753E-06 17308 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.819 61.54 29.585 36.601 46.186 27.851 0 39.442 28 37 46 28 0 37 1 1 1 1 0 1 17747 11496 3355 11067 26812;26813 31097;31098 31098 2 LAHALFHTQTK Unmodified 1265.6881 0.68805534 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 11 0 1 46.516 46.516 4 4.2704E-06 10128 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.34 70.818 0 60 0 0 0 0 0 60 0 0 0 0 0 1 0 0 0 0 8742.6 11497 63 11068 26814 31099 31099 1 LAHFDPR Unmodified 854.43989 0.43988615 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 8.5 2.69 1 1 1 1 41.395 41.395 3 0.011441 10575 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.335 44.762 78.781 82.424 90.448 119.85 27.237 58.919 74 83 93 112 28 56 2 2 2 3 1 2 26412 11498 1368 11069 26815;26816;26817;26818 31100;31101;31102;31103 31101 4 LAHFEPSQR Unmodified 1083.5461 0.54614213 16 A0A087WPL5;E9QNN1;O70133;Q3UR42;A0A0R4J2C3 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 7 0 1 39.533 39.533 3 0.00073928 9736 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.08 67.334 0 88.312 0 139.1 158.88 0 0 83 0 130 158 0 0 1 0 1 1 0 4119.9 11499 16 11070 26819 31104 31104 1 LAHPVQFVFLR Unmodified 1325.7608 0.76082635 982 F6R220;Q3TZM9 Alg11 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase yes no 0 0 0 0 12 0 1 66.875 66.875 3 0.002659 16611 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.067 41.082 0 20.216 0 20.234 28.359 0 0 19 0 19 28 0 0 1 0 1 1 0 2702 11500 982 11071 26820 31105 31105 1 LAHYIDR Unmodified 886.4661 0.4661009 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 7 0 1 41.741 41.741 3 0.047066 10730 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.127 17.517 29.817 0 38.215 37.468 36.981 0 28 0 37 37 37 0 1 0 1 1 1 0 4799.4 11501 182 11072 26821 31106 31106 1 LAHYNKR Unmodified 900.49298 0.49298435 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 1 11 1.58 1 1 1 1 29.97 29.97 3 0.015537 4420 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.89 47.471 489.81 508.17 661.1 532.21 69.35 716.51 462 514 663 519 69 674 3 3 3 2 1 3 55546 11502 1349;1350;2541 11073 26822;26823;26824;26825 31107;31108;31109;31110 31108 4 LAIAVAHSSQVR Unmodified 1250.7095 0.70951906 625 B2RWC4 Lrrc73 yes yes 0 0 0 0 11 0 1 44.926 44.926 3 0.00019473 9567 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.326 49.812 0 0 0 0 88 0 0 0 0 0 88 0 0 0 0 0 1 0 10002 11503 625 11074 26826 31111 31111 1 LAIFTDDIK Unmodified 1034.5648 0.56481189 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 0 0 0 9.71 2.25 1 2 1 1 2 76.205 76.205 2;3 1.9109E-05 28925 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.05 72.675 789.21 581.12 658.23 1017.5 1178.9 1620.8 739 591 677 972 1196 1552 5 5 5 5 5 8 319830 11504 1696 11075 26827;26828;26829;26830;26831;26832;26833 31112;31113;31114;31115;31116;31117;31118;31119 31118 8 LAIGFSTVQK Unmodified 1062.6073 0.6073454 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97;A0A0G2JES8;H3BK41 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 0 11 0.816 1 1 1 67.442 67.442 2;3 4.6115E-05 18788 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 115.86 78.886 149.15 0 40.034 179.58 213.6 58.081 139 0 37 167 214 56 1 0 1 1 2 1 20917 11505 2968 11076 26834;26835;26836 31120;31121;31122 31121 3 LAIIPGGGGTQR Unmodified 1138.6459 0.64585618 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 56.611 56.611 2 3.2724E-06 16313 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.898 35.932 153.15 130.26 119.23 201.73 228.78 134.74 144 134 120 195 232 130 2 2 1 2 2 1 30220 11506 150 11077 26837;26838;26839 31123;31124;31125 31123 3 LAILGIHNEVSK Unmodified 1292.7452 0.74523587 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 11 1.41 1 1 1 1 1 62.525 62.525 3 2.527E-12 19264 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.77 94.832 612.43 274.21 779.19 183.63 471.85 439.43 575 281 735 176 466 422 3 2 4 2 3 3 116370 11507 418 11078 26840;26841;26842;26843;26844 31126;31127;31128;31129;31130 31126 5 LAILYAK Unmodified 790.49528 0.49527576 2856 Q99L47;F8WJK8;E9Q1V0 St13 Hsc70-interacting protein yes no 0 0 0 0 7.8 5.56 2 2 1 69.359 69.359 2 0.0086474 23616 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.05 83.582 351.79 1251.3 1661.6 1644.6 2293.9 1729.9 330 1220 1662 1633 2322 1681 3 3 2 3 4 3 223060 11508 2856 11079 26845;26846;26847;26848;26849 31131;31132;31133;31134;31135;31136 31131 6 LAIQGPEDSPSR Unmodified 1268.6361 0.63607935 2850 Q99KX1 Mlf2 Myeloid leukemia factor 2 yes yes 0 0 0 0 6 0 1 49.777 49.777 2 0.00017877 15238 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.342 44.089 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11509 2850 11080 26850 31137 31137 1 LAISSIVRPSSIR Unmodified 1397.8354 0.83544786 1098 G5E881;Q3TUH1 Tamm41 Phosphatidate cytidylyltransferase, mitochondrial yes no 0 0 0 1 1 0 1 59.726 59.726 3 0.002174 19539 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.827 38.888 29.904 27.776 0 0 47.467 18.9 28 28 0 0 46 19 1 1 0 0 1 1 8906.4 11510 1098 11081 26851 31138 31138 1 LAKPLSSLTPLILAAK Unmodified 1635.0335 0.033478965 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 1 1 0 4 87.57 87.57 3;4 6.1499E-05 32637 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.441 0 69.516 45.321 73.232 126.48 107.8 72.852 65 47 70 120 107 70 2 2 3 4 4 4 11760 11511 2556 11082 26852;26853;26854;26855 31139;31140;31141;31142;31143;31144 31144 6 LALAGPQLR Unmodified 937.5709 0.57090032 2307 Q80TZ9;A2A7T1;A0A1W2P787;A2A7T3 Rere Arginine-glutamic acid dipeptide repeats protein yes no 0 0 0 0 9 0 1 38.457 38.457 3 0.053356 8203 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.002 0.4591 0 222.77 230.73 179.71 0 232.39 0 213 233 177 0 218 0 1 1 1 0 1 10461 11512 2307 11083 26856 31145 31145 1 LALASLGYEK Unmodified 1063.5914 0.59136099 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 10.5 0.5 1 1 69.645 69.645 2;3 0.002561 20367 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.377 31.906 29.754 57.578 0 0 0 0 28 56 0 0 0 0 1 1 0 0 0 0 14023 11513 3327 11084 26857;26858 31146;31147 31146 2 LALDGATWADVFK Unmodified 1405.7242 0.72416608 1914 Q3TCN2 Plbd2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 28 kDa form;Putative phospholipase B-like 2 40 kDa form;Putative phospholipase B-like 2 15 kDa form yes yes 0 0 0 0 13 0 1 88.715 88.715 3 0.013205 35071 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.069 14.007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11514 1914 11085 26859 31148 31148 1 LALDLEIATYR Unmodified 1276.7027 0.70270235 657 CON__P04264 yes yes 0 0 0 0 7 0 2 78.789 78.789 2 0.0032922 28037 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.275 0 139.26 80.298 150.18 99.576 157.33 67.475 131 84 148 102 157 65 3 2 3 3 3 1 9204.5 + 11515 657 11086 26860;26861 31149;31150;31151 31150 3 LALEETGTEVK Unmodified 1188.6238 0.62378333 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 5 0 2 58.726 58.726 2;3 0.0022413 20184 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.338 34.077 89.602 72.227 27.923 0 85.5 38.375 84 74 28 0 83 37 2 2 1 0 2 1 7151.7 11516 3355 11087 26862;26863 31152;31153 31153 2 LALEGVEK Unmodified 857.48583 0.48583328 722 D3YYK8;E9Q6X0;Q8R001 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 7 0 1 59.39 59.39 3 0.0029055 18955 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.743 43.516 59.508 0 97.504 63.344 100.48 96.271 56 0 93 65 102 93 1 0 1 1 1 1 5015.3 11517 722 11088 26864 31154 31154 1 LALESICLLLGESTTDWK Unmodified 2048.05 0.049993245 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 10 0.816 1 1 1 105.84 105.84 3 3.9057E-44 37080 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.43 104.88 6 18.495 4.8403 0 9.414 0 6 18 5 0 9 0 1 2 1 0 1 0 3838.6 11518 3204 11089 26865;26866;26867 31155;31156;31157;31158 31155 4 LALETTVLVESYTLPDGR Unmodified 1976.0466 0.046622427 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 7.5 3.59 1 1 1 1 1 1 89.469 89.469 3 2.8125E-11 25366 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.375 70.954 9.5583 76.852 74.139 55.945 44.915 48.82 9 74 74 56 47 47 1 3 2 2 2 2 11918 11519 1690 11090 26868;26869;26870;26871;26872;26873 31159;31160;31161;31162;31163;31164 31164 6 LALFAHR Unmodified 826.48136 0.48135703 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 6 5 1 1 52.196 52.196 3 0.002614 16146 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 116 71.025 89.394 54.956 77.402 0 29.288 0 84 56 75 0 28 0 2 1 2 0 1 0 36123 11520 3174 11091 26874;26875 31165;31166 31165 2 LALFHVEQGK Unmodified 1140.6291 0.62914348 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 10.8 1.48 1 1 1 1 59.855 59.855 2;3 5.4668E-10 16065 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.96 97.366 561.78 246.91 426.55 434.42 666.06 583.28 527 251 410 425 675 565 3 3 2 2 3 3 91698 11521 2487 11092 26876;26877;26878;26879 31167;31168;31169;31170 31168 4 LALFNPDVSWDR Unmodified 1431.7147 0.71466402 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 0 10.7 1.89 1 1 1 1 2 81.754 81.754 2;3 6.5945E-60 28276 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 211.64 167.29 435.63 183.45 308.64 419.27 360.98 146.33 408 195 298 398 362 139 5 3 4 5 5 3 274230 11522 2157 11093 26880;26881;26882;26883;26884;26885 31171;31172;31173;31174;31175;31176;31177;31178 31174 8 LALFNPDVSWDRK Unmodified 1559.8096 0.80962704 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 1 10 0 1 73.681 73.681 3 0.00020752 22255 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.815 48.081 68.659 72.075 121.5 82.326 61.23 86.731 65 74 120 83 65 83 1 1 1 1 1 1 11779 11523 2157 11094 26886 31179 31179 1 LALGSFVEEYNNK Unmodified 1482.7355 0.73545904 1703 P61963 Dcaf7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 0 8 0 1 76.311 76.311 3 9.8169E-05 26282 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.689 70.026 39.292 26.367 46.377 36.252 75.739 0 37 28 46 37 74 0 1 1 1 1 1 0 3638 11524 1703 11095 26887 31180 31180 1 LALGVGR Unmodified 684.42826 0.42825883 740 D3Z0G0;Q9EQ80 Nif3l1 NIF3-like protein 1 yes no 0 0 0 0 9 0 1 50.512 50.512 2 0.032625 13518 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.185 30.663 138.74 148.12 0 127.35 202.67 233 130 148 0 120 207 224 1 1 0 1 1 1 44569 11525 740 11096 26888 31181 31181 1 LALHELK Unmodified 822.49634 0.49633839 3321 Q9WTP7 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 50.79 50.79 3 0.0070259 13364 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.635 11.367 87.661 199.06 150.17 78.86 319.93 203.46 83 195 148 83 316 195 1 2 1 1 2 1 24363 11526 3321 11097 26889;26890 31182;31183 31183 2 LALHNIK Unmodified 807.49667 0.49667274 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11.5 1.5 1 1 47.023 47.023 3 0.0046042 10601 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.98 22.603 246.67 86.18 128.27 144.28 102.4 224.14 231 93 130 139 102 213 2 1 1 1 1 2 31221 11527 570 11098 26891;26892 31184;31185 31184 2 LALIQLQVSSIK Unmodified 1311.8126 0.81258715 3206 Q9JHW2 Nit2 Omega-amidase NIT2 yes yes 0 0 0 0 1 0 1 82.494 82.494 3 0.011562 28935 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.592 27.321 19.122 38.079 0 0 0 20.254 18 37 0 0 0 19 1 1 0 0 0 1 2179.3 11528 3206 11099 26893 31186 31186 1 LALIQPSR Unmodified 896.54435 0.54435122 2866 Q99LS3;A0A0J9YVH9;D3Z4T3 Psph Phosphoserine phosphatase yes no 0 0 0 0 11 0 1 56.673 56.673 2 0.0098572 14235 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.139 65.624 0 0 92.784 54.588 57.93 67.637 0 0 88 56 60 65 0 0 1 1 1 1 18680 11529 2866 11100 26894 31187 31187 1 LALLEEAR Unmodified 913.52328 0.52328142 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 7 0 1 63.029 63.029 2 0.048601 20655 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.207 0 59.282 63.802 81.402 96.013 41.696 58.506 56 65 83 93 46 56 1 1 1 1 1 1 6564.4 11530 2559 11101 26895 31188 31188 1 LALLQVR Unmodified 811.52797 0.52797287 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 8 4.97 1 1 1 65.141 65.141 2 8.1935E-10 15915 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 175.34 65.168 2464.3 1568.1 142.75 2291.6 3504.6 2703.5 2298 1486 151 2139 3518 2590 2 3 1 2 2 3 685670 11531 1055 11102 26896;26897;26898 31189;31190;31191;31192 31192 4 LALNCVGGK Unmodified 930.49569 0.49568646 3150 Q9DCS3 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 9.33 0.471 2 1 55.899 55.899 2;3 0.00092483 14129 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.81 72.515 108.77 114.8 58.206 46.809 38.702 0 102 111 56 46 37 0 2 2 1 1 1 0 10437 11532 3150 11103 26899;26900;26901 31193;31194;31195 31195 3 LALPADSVNIK Unmodified 1139.655 0.65502388 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 8 0 1 67.67 67.67 3 0.00056875 22215 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.893 42.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11533 823 11104 26902 31196 31196 1 LALQSSSCLSLFR Unmodified 1480.7708 0.77079869 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 6 5 1 1 74.82 74.82 2;3 0.0016553 22216 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.786 28.354 29.952 18.196 0 30.604 0 49.036 28 19 0 28 0 46 1 1 0 1 0 1 5404.3 11534 513 11105 26903;26904 31197;31198 31198 2 LALTTAEFLAYQCEK Unmodified 1756.8706 0.87057232 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 10.1 1.96 2 1 2 2 83.037 83.037 2;3;4 1.5956E-31 32221 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 161.94 138.34 309.84 285.34 451.16 446.92 370.73 351.64 291 285 439 436 371 334 9 6 6 6 5 5 209330 11535 1741 11106 26905;26906;26907;26908;26909;26910;26911 31199;31200;31201;31202;31203;31204;31205;31206;31207;31208;31209 31209 11 LALVLHQLGR Unmodified 1118.6924 0.69241244 341 A0A1Y7VL44;E9Q6P5;A0A1Y7VLT4 Ttc7b yes no 0 0 0 0 1 0 1 68.294 68.294 3 0.0063459 23149 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.432 33.36 29.952 7.4035 9.1428 0 9.414 0 28 9 9 0 9 0 1 1 1 0 1 0 1236.3 11536 341 11107 26912 31210 31210 1 LALVNNLQIVDSK Unmodified 1425.8191 0.81912909 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 9 0 1 77.344 77.344 3 3.9793E-13 26098 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.88 56.057 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11537 35 11108 26913 31211 31211 1 LALVTGGEIASTFDHPELVK Unmodified 2096.1154 0.11537069 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 7.5 0.5 1 1 81.582 81.582 3;4 3.534E-17 28676 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.54 105.6 89.559 22.454 77.309 85.271 102.77 0 84 23 74 84 102 0 2 1 1 2 2 0 13180 11538 1823 11109 26914;26915 31212;31213 31213 2 LAMQEFMILPVGAESFR Unmodified 1937.9743 0.97432588 1399 P17183;A0A0N4SUX5 Eno2 Gamma-enolase yes no 0 0 0 0 9.67 1.7 3 2 2 1 1 94.749 94.749 2;3 1.9775E-12 34003 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.46 87.844 119.43 78.154 66.581 78.032 76.481 43.606 112 79 65 73 74 42 6 5 4 5 2 4 126110 11539 1399 11110 26916;26917;26918;26919;26920;26921;26922;26923;26924 31214;31215;31216;31217;31218;31219;31220;31221;31222;31223;31224;31225;31226 31219 13 LAMQEFMILPVGASSFR Unmodified 1895.9638 0.9637612 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 11.1 1.36 1 2 2 1 2 93.674 93.674 2;3 3.3556E-25 30637 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.1 103.36 116.85 35.25 116.34 76.467 76.186 29.325 111 37 112 75 76 28 4 2 4 4 4 2 247260 11540 1398 11111 26925;26926;26927;26928;26929;26930;26931;26932 31227;31228;31229;31230;31231;31232;31233;31234;31235;31236 31230 10 LAMQEFMILPVGASSFR Oxidation (M) 1911.9587 0.95867582 1398 P17182;Q6PHC1;B0QZL1 Eno1 Alpha-enolase;Enolase yes no 0 0 1 0 10.4 0.49 3 2 90.812 90.812 3 0.00017875 28168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.808 16.385 134.7 47.398 97.406 41.534 0 54.366 126 47 93 38 0 51 4 2 3 2 0 2 26305 11541 1398 11111 26933;26934;26935;26936;26937 31237;31238;31239;31240;31241 31237 93;94 5 LANQAADYFGDAFK Unmodified 1529.7151 0.71505795 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 10 3 1 1 76.778 76.778 2;3 0.0016168 29319 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.812 34.149 99.352 0 73.505 136.08 86.352 136.12 93 0 74 130 93 130 1 0 1 1 1 1 7400.3 11542 3327 11112 26938;26939 31242;31243 31243 2 LANQIPFAK Unmodified 1000.5706 0.57056597 3029 Q9D0L7 Armc10 Armadillo repeat-containing protein 10 yes yes 0 0 0 0 9 0 1 64.89 64.89 3 0.025298 20208 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.198 21.259 0 0 46.292 78.123 0 0 0 0 46 74 0 0 0 0 1 1 0 0 1944.7 11543 3029 11113 26940 31244 31244 1 LAPALSVK Unmodified 797.50109 0.50108942 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 9.5 0.5 1 1 59.342 59.342 3 0.0020326 15788 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.798 32.546 493.64 348.78 414.85 518.15 483.36 504.26 464 355 404 505 495 483 4 3 3 4 3 3 29370 11544 246 11114 26941;26942 31245;31246;31247;31248 31247 4 LAPDYDALDVANK Unmodified 1403.6933 0.69325988 1735 P62751 Rpl23a 60S ribosomal protein L23a yes yes 0 0 0 0 6 0 1 68.873 68.873 3 0.052049 24337 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.179 12.621 39.406 0 49.573 0 56.581 58.081 37 0 46 0 56 56 1 0 1 0 1 1 9336.8 11545 1735 11115 26943 31249 31249 1 LAPEFAK Unmodified 774.42759 0.42759012 2194 Q6GT24;D3Z0Y2;O08709;Q8BG37 Prdx6;Prdx6b Peroxiredoxin-6 yes no 0 0 0 0 9.67 2.49 1 1 1 57.551 57.551 2 0.027191 19837 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.906 39.223 375.36 68.29 514.88 233.33 346.98 305.63 353 74 491 241 352 296 3 1 3 2 2 2 142130 11546 2194 11116 26944;26945;26946 31250;31251;31252 31252 3 LAPETSSDTR Unmodified 1075.5146 0.51456723 152 Q8CCJ4;A0A0R4J030;A0A286YD03 Amer2 APC membrane recruitment protein 2 yes no 0 0 0 0 4 0 1 36.267 36.267 2 0.0058363 9747 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.376 51.057 39.613 17.545 0 0 0 0 37 19 0 0 0 0 1 1 0 0 0 0 2713.7 11547 152 11117 26947 31253 31253 1 LAPEVLEDLVQNTEFSEQELK Unmodified 2430.2166 0.21660088 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 8.2 3.97 1 1 1 2 98.94 98.94 3;4 1.115E-17 35881 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.49 98.925 43.673 98.456 41.403 64.408 75.134 90.982 41 95 41 62 76 87 3 5 3 4 4 4 41604 11548 2392 11118 26948;26949;26950;26951;26952 31254;31255;31256;31257;31258;31259;31260 31256 7 LAPEVMEDLVK Unmodified 1242.653 0.65297497 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 7.4 2.87 1 2 1 1 79.402 79.402 2;3 6.5842E-06 29250 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.95 42.412 108.72 148.45 100.93 124.33 167.34 174.04 102 148 102 121 167 167 2 4 2 3 3 3 68324 11549 1737 11119 26953;26954;26955;26956;26957 31261;31262;31263;31264;31265 31263 5 LAPEYEAAATR Unmodified 1190.5932 0.5931519 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 0 5 0.816 1 1 1 48.647 48.647 2;3 3.2934E-09 15614 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.81 97.412 98.761 120.91 70.322 105.4 100.53 38.402 93 121 74 102 102 37 2 2 1 2 2 1 17413 11550 1470 11120 26958;26959;26960 31266;31267;31268 31266 3 LAPEYEK Unmodified 848.42798 0.42798405 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 6 0 1 49.828 49.828 2 0.05541 15140 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.109 14.321 78.828 63.126 42.975 58.647 0 59.696 74 65 46 56 0 56 1 1 1 1 0 1 4340.5 11551 193 11121 26961 31269 31269 1 LAPFIAK Unmodified 758.46906 0.46906101 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 66.731 66.731 2 0.014969 16560 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.82 65.579 118.05 152.15 176.72 241.98 230.82 453.05 111 143 167 235 224 425 1 1 1 2 1 1 48808 11552 1433 11122 26962;26963 31270;31271 31271 2 LAPGGHVGR Unmodified 862.47733 0.47733428 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 7.5 0.5 1 1 30.146 30.146 3 0.0028582 5059 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.905 46.595 128.91 108.35 63.705 55.666 92.762 116.75 121 111 65 56 93 112 2 2 1 1 1 2 10814 11553 3093 11123 26964;26965 31272;31273 31273 2 LAPITSDPTEAAAVGAVEASFK Unmodified 2144.1001 0.10011456 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 7.75 3.11 1 1 1 1 86.803 86.803 3;4 1.6147E-54 32478 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 157.57 139.2 86.119 56.647 133.59 100.82 138.91 79.441 81 56 130 98 138 77 3 1 3 3 3 3 29182 11554 1609 11124 26966;26967;26968;26969 31274;31275;31276;31277 31275 4 LAPITYPQGLAMAR Unmodified 1500.8123 0.81226958 1675 P60764;A2AC13 Rac3 Ras-related C3 botulinum toxin substrate 3 yes no 0 0 0 0 10 0 1 71.39 71.39 2 0.0019541 21196 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.719 41.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11555 1675 11125 26970 31278 31278 1 LAPNEFPHK Unmodified 1051.5451 0.5450795 1979 Q3UHD6;A0A0G2JF85 Snx27 Sorting nexin-27 yes no 0 0 0 0 7 0 1 50.926 50.926 3 0.0043379 14939 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.159 36.561 0 48.21 43.901 66.853 83.747 0 0 46 46 65 83 0 0 1 1 1 1 0 2928.7 11556 1979 11126 26971 31279 31279 1 LAPPLVIK Unmodified 849.56878 0.56877505 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 69.235 69.235 2;3 0.015998 20219 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.281 32.282 0 29.792 0 151.06 46.298 168.43 0 28 0 139 46 158 0 1 0 2 1 1 9347.2 11557 1489 11127 26972;26973 31280;31281 31280 2 LAPPLVIKEDEIR Unmodified 1491.8661 0.86607929 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 1 7 0 1 66.444 66.444 3 4.9952E-07 22249 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.98 71.829 79.402 0 0 99.809 97.81 125.13 74 0 0 93 102 120 1 0 0 1 1 1 5380.1 11558 1489 11128 26974 31282 31282 1 LAPPLVTLLSAEPELQYVALR Unmodified 2292.3093 0.30931947 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 11.5 1.5 1 1 104.69 104.69 3 9.0166E-14 33522 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.91 95.756 5.34 4.9599 28 0 0 0 5 5 28 0 0 0 1 1 2 0 0 0 7785.4 11559 1203 11129 26975;26976 31283;31284;31285 31284 3 LAPPLVTLLSGEPEVQYVALR Unmodified 2264.278 0.27801935 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 10.3 1.67 1 2 1 1 1 1 98.999 98.999 3;4 2.5723E-71 32354 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 178.51 154.04 91.409 29.216 9.738 16.93 5.23 79.828 89 28 9 16 5 76 6 2 1 3 1 6 93451 11560 3123 11130 26977;26978;26979;26980;26981;26982;26983 31286;31287;31288;31289;31290;31291;31292;31293;31294;31295;31296;31297;31298;31299 31292 14 LAPQEGSEK Unmodified 957.47673 0.47672516 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 5 0 1 41.217 41.217 2 0.016077 11697 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.557 6.2549 39.564 27.124 0 29.762 44.743 58.419 37 28 0 28 46 56 1 1 0 1 1 1 2703.1 11561 305 11131 26984 31300 31300 1 LAQAAQSSAATITQLAEVVK Unmodified 1999.095 0.094969603 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 11.5 1.5 1 1 88.048 88.048 3 0.00016893 34783 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.87 21.542 0 0 28.601 38.06 35.964 28.822 0 0 28 37 37 28 0 0 1 1 1 1 1745.5 11562 287 11132 26985;26986 31301;31302 31302 2 LAQAHGFQGFLR Unmodified 1343.7099 0.70985342 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 10 0.816 1 1 1 57.329 57.329 2;3 3.9852E-12 14440 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.94 89.857 69.264 77.68 143.96 204.19 275.53 310.87 65 74 140 195 280 299 2 1 3 2 2 3 56031 11563 2186 11133 26987;26988;26989 31303;31304;31305;31306 31306 4 LAQEAPGLAFTTPVVASAAPVATLAPTTR Unmodified 2820.5385 0.53854414 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 0 8 0 1 85.795 85.795 4 0.045656 30809 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 23.168 8.7072 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1241.2 11564 2320 11134 26990 31307 31307 1 LAQENGWGVMVSHR Deamidation (N) 1583.7515 0.75146023 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 1 0 0 8.67 3.09 2 2 2 58.628 58.628 3 1.6043E-11 19731 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.09 98.377 665.25 364.22 234.73 634.55 676.4 863.35 623 380 234 605 686 828 5 4 1 4 3 5 86967 11565 1399 11135 26991;26992;26993;26994;26995;26996 31308;31309;31310;31311;31312;31313 31309 494 6 LAQESGR Unmodified 759.38752 0.38751622 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 28.468 28.468 2 0.015278 5367 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.41 47.325 169.04 182.34 185.32 118.24 299.97 153.09 158 185 176 111 297 148 1 2 1 1 2 1 23641 11566 1814 11136 26997;26998 31314;31315 31314 2 LAQFVEHWK Unmodified 1156.6029 0.60292873 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10.9 1.25 1 2 2 1 1 68.699 68.699 2;3 0.00011566 22100 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.8 92.999 417.56 604.22 935.8 865.69 411.78 1189.3 392 604 930 845 425 1131 2 5 5 5 4 8 414720 11567 551 11137 26999;27000;27001;27002;27003;27004;27005 31316;31317;31318;31319;31320;31321;31322;31323;31324 31316 9 LAQGEYVAPEK Unmodified 1203.6136 0.61355299 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;F6WYN6 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 5 0 1 53.03 53.03 3 0.0075491 17405 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.218 27.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11568 2753 11138 27006 31325 31325 1 LAQGLTHLGK Unmodified 1036.6029 0.60292873 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 9.5 0.5 1 1 53.773 53.773 3 0.00033548 13196 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.171 46.145 117.42 137.2 166.17 128.07 219.01 0 111 139 167 130 215 0 1 1 1 1 1 0 18572 11569 2697 11139 27007;27008 31326;31327 31327 2 LAQGPELAEDDADLLHK Unmodified 1833.9109 0.91085723 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 6.43 4.2 2 2 1 2 66.384 66.384 3;4 1.4806E-12 23903 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.9 99.339 217.04 308.66 311.19 142.16 331.89 376.73 204 305 305 140 334 361 4 6 5 4 6 5 61875 11570 2674 11140 27009;27010;27011;27012;27013;27014;27015 31328;31329;31330;31331;31332;31333;31334 31331 7 LAQIHFPR Unmodified 980.55558 0.55558461 43 A0A0R4J0X5;A0A0A0MQA3;P07758;Q00896 Serpina1a;Serpina1c Alpha-1-antitrypsin 1-1;Alpha-1-antitrypsin 1-3 yes no 0 0 0 0 9.5 0.5 1 1 53.565 53.565 3 0.0035243 13094 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.451 60.473 20.081 27.975 27.696 18.404 37.857 0 19 28 28 19 37 0 1 1 1 1 1 0 5883.3 11571 43 11141 27016;27017 31335;31336 31336 2 LAQMCGLHIVVHADELEELINYYQDR Unmodified 3128.5059 0.50594016 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 13 0 1 89.101 89.101 4 6.0323E-17 35185 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.198 63.786 20.207 0 30.194 0 0 29.848 19 0 28 0 0 28 1 0 1 0 0 1 4788.6 11572 2185 11142 27018 31337 31337 1 LAQNILSYLDMK Unmodified 1407.7432 0.74318696 2552 Q8CI32 Bag5 BAG family molecular chaperone regulator 5 yes yes 0 0 0 0 11 0 1 92.298 92.298 3 0.016081 29595 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.502 27.746 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1960.7 11573 2552 11143 27019 31338 31338 1 LAQNPLFWK Unmodified 1115.6128 0.61276513 674 D3YU13;Q9DD02 l7Rn6;L7rn6 Protein Hikeshi yes no 0 0 0 0 11 0 1 76.16 76.16 2 1.0843E-11 22773 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.55 93.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11574 674 11144 27020 31339 31339 1 LAQPYVGVFLK Unmodified 1233.7121 0.71214483 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 78.63 78.63 2;3 0.00030059 23870 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.958 43.974 98.193 36.052 57.332 67.628 0 39.442 92 37 56 65 0 37 2 1 1 1 0 1 21030 11575 2539 11145 27021;27022 31340;31341 31341 2 LAQQNAVTSLSEDCKR Deamidation (N) 1819.8734 0.87342586 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 1 0 1 6 0 1 49.969 49.969 3 0.025055 15332 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.547 25.933 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11576 3261 11146 27023 31342 31342 1118 1 LAQQNAVTSLSEDCKR Unmodified 1818.8894 0.88941028 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 7 0 1 49.888 49.888 3 7.0534E-08 14433 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.81 53.519 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11577 3261 11146 27024 31343 31343 1 LAQQYYLVYQEPIPTAQLVQR Unmodified 2520.3377 0.33765949 1589 P49722;Q8BKE0 Psma2 Proteasome subunit alpha type-2 yes no 0 0 0 0 10.5 2.5 1 1 80.978 80.978 3 8.3954E-08 28501 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.122 45.793 20.195 57.905 18.976 38.627 36.338 28.811 19 56 19 37 37 28 1 2 1 2 1 1 10007 11578 1589 11147 27025;27026 31344;31345 31344 2 LAQSNGWGVMVSHR Deamidation (N) 1541.7409 0.74089555 1398 P17182;Q6PHC1 Eno1 Alpha-enolase no no 0 1 0 0 9.33 2.62 1 1 1 58.595 58.595 3 9.0862E-11 18655 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 119.02 95.651 938.31 657.75 1021.2 826.21 1051.4 1000.8 883 686 1013 827 1066 967 2 2 2 2 1 3 108490 11579 1398 11148 27027;27028;27029 31346;31347;31348 31346 486 3 LAQSNGWGVMVSHR Unmodified 1540.7569 0.75687996 1398 P17182;Q6PHC1 Eno1 Alpha-enolase no no 0 0 0 0 10.3 1.25 1 1 1 54.56 54.56 3 8.3332E-05 13505 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.47 43.514 187.34 163.14 242.22 244.98 212.36 156.76 176 167 240 241 213 148 2 2 2 3 2 2 20972 11580 1398 11148 27030;27031;27032 31349;31350;31351 31350 3 LAQYESK Unmodified 837.42323 0.42323303 1247 O70251;A0A087WS46 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 0 10.7 3.3 1 2 46.753 46.753 2;3 0.027247 14611 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.458 32.385 256.3 0 496.43 0 438.38 328.53 241 0 460 0 426 315 2 0 3 0 2 2 26328 11581 1247 11149 27033;27034;27035 31352;31353;31354 31354 3 LASCSADGTVR Unmodified 1135.5292 0.52917144 1655 P58404;V9GXE7 Strn4 Striatin-4 yes no 0 0 0 0 5 0 1 38.19 38.19 2 0.0015695 10302 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.716 45.649 29.811 0 39.077 18.118 17.008 59.211 28 0 37 19 19 56 1 0 1 1 1 1 1861.6 11582 1655 11150 27036 31355 31355 1 LASDLLEWIR Unmodified 1214.6659 0.66592292 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 10 1.87 1 1 1 1 92.89 92.89 2;3 0.00079768 36969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.148 54.857 30.044 97.454 119.06 134.99 29.288 108.73 28 93 121 130 28 102 1 1 2 2 1 1 25654 11583 418;310 11151 27037;27038;27039;27040 31356;31357;31358;31359;31360 31360 5 LASDSDAESDSR Unmodified 1251.5215 0.5215031 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 1 0 1 33.787 33.787 2 7.6335E-12 8445 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.77 87.321 24.454 18.193 22.394 28.677 31.49 19.355 23 19 23 28 32 19 1 1 1 1 1 1 5034.8 11584 204 11152 27041 31361 31361 1 LASDTEDNDEALAEILQANDNLTQVINLYK Unmodified 3332.626 0.62597476 2632 Q8R0H9;A0A2R8VI72 Gga1 ADP-ribosylation factor-binding protein GGA1 yes no 0 0 0 0 6 0 1 106.12 106.12 4 1.449E-18 37869 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.499 61.188 0 0 4.328 0 5.23 0 0 0 4 0 5 0 0 0 1 0 1 0 971.81 11585 2632 11153 27042 31362 31362 1 LASETEDNDNSLGDILQASDNLSR Unmodified 2576.1838 0.1837972 437 A2A9W7;Q8BMI3;S4R2D2 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 0 0 0 0 4 0 1 78.794 78.794 3 3.7359E-13 29387 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.736 57.922 9.612 8.9279 0 0 0 0 9 9 0 0 0 0 1 1 0 0 0 0 2378.7 11586 437 11154 27043 31363 31363 1 LASEWKPEIR Unmodified 1227.6612 0.66117189 949 E9QB01 Ncam1 yes yes 0 0 0 1 10.5 2.5 1 1 57.558 57.558 3 0.00049609 17505 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.363 41.35 98.475 109.32 128.26 120.08 182.86 149.35 93 111 130 120 185 145 1 1 1 1 1 1 18953 11587 949 11155 27044;27045 31364;31365 31364 2 LASFYER Unmodified 884.43922 0.43921744 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 8.5 0.5 1 1 55.624 55.624 2 0.0055125 16642 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.81 82.847 211.38 125.21 147.61 384.17 259.74 266.55 197 120 148 364 269 257 1 1 1 2 1 1 205530 11588 1596 11156 27046;27047 31366;31367 31366 2 LASGCDGSEIPDEVK Unmodified 1575.7087 0.70865195 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 0 0 0 4 0 1 58.432 58.432 3 5.9851E-05 20319 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.823 73.442 0 38.766 36.032 37.636 34.957 58.698 0 37 37 37 37 56 0 1 1 1 1 1 5852.9 11589 3386 11157 27048 31368 31368 1 LASGELR Unmodified 744.413 0.41300269 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 6 0 1 41.287 41.287 2 0.031273 11235 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.265 85.265 78.882 103.21 0 0 86.818 0 74 102 0 0 83 0 1 1 0 0 1 0 26942 11590 195 11158 27049 31369 31369 1 LASHIFVK Unmodified 913.53854 0.53853756 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 11.5 0.5 1 1 54.039 54.039 3 0.009133 11841 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.038 37.513 69.463 0 47.353 117.48 54.446 166.87 65 0 46 111 56 158 1 0 1 2 1 2 14170 11591 640 11159 27050;27051 31370;31371 31371 2 LASHLNLAMCHLK Unmodified 1506.7799 0.77992359 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 11.5 0.5 1 1 56.044 56.044 4 9.6091E-05 13940 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.216 68.485 119.8 74.71 0 80.211 35.678 48.018 112 74 0 74 37 46 2 1 0 2 1 1 9569 11592 1491 11160 27052;27053 31372;31373 31372 2 LASISVATEGPVTR Unmodified 1399.7671 0.76709352 641 B9EJA2 Cttnbp2 Cortactin-binding protein 2 yes yes 0 0 0 0 13 0 1 60.229 60.229 2 0.0052198 21276 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.274 41.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11593 641 11161 27054 31374 31374 1 LASLQQENK Unmodified 1029.5455 0.54547343 730 D3YZP9 Ccdc6 Coiled-coil domain-containing protein 6 yes yes 0 0 0 0 8 0 1 49.617 49.617 3 0.047112 13668 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.08 15.863 0 39.368 0 0 106.69 0 0 37 0 0 102 0 0 1 0 0 1 0 2377.1 11594 730 11162 27055 31375 31375 1 LASLSEKPPAIDWAYYR Unmodified 1979.0153 0.015262719 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 1 10.2 1.72 1 1 1 1 1 73.548 73.548 3 3.3209E-25 22173 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.1 105.08 569.06 170.59 334.06 502.94 153.14 248.43 533 190 324 481 167 240 4 3 2 4 2 3 127110 11595 3156 11163 27056;27057;27058;27059;27060 31376;31377;31378;31379;31380 31378 5 LASQANIAQVLAELK Unmodified 1567.8934 0.89335667 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 89.347 89.347 3 4.6668E-30 28905 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 155.57 116.94 265.72 204.58 297.52 235.96 273.35 261.94 250 208 289 229 275 252 5 5 5 6 5 5 131870 11596 1203;3123 11164 27061;27062;27063;27064;27065;27066 31381;31382;31383;31384;31385;31386;31387;31388;31389 31384 9 LASQLGVYK Unmodified 977.55458 0.55458155 816 E9PUE7;Q5SSL4;H3BKV6 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 10.5 0.5 1 1 60.726 60.726 2 0.00042787 16458 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.07 65.917 59.578 39.368 85.692 145.81 53.483 146.65 56 37 83 139 56 139 1 1 1 2 1 2 14771 11597 816 11165 27067;27068 31390;31391 31390 2 LASSIAFSYNAK Unmodified 1270.6558 0.65575216 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 10 0 1 67.26 67.26 2 8.7959E-06 19252 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.22 80.846 29.814 0 38.638 27.971 17.581 29.346 28 0 37 28 19 28 1 0 1 1 1 1 1919.8 11598 3165 11166 27069 31392 31392 1 LASSLTTK Unmodified 819.47018 0.47018322 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 51.875 51.875 2 7.7741E-24 14009 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 194.44 118.41 714.34 967.3 1016.7 1050.3 1517.8 1237.1 671 968 1001 1031 1531 1196 4 5 4 5 5 5 240870 11599 3117 11167 27070;27071;27072;27073;27074 31393;31394;31395;31396;31397;31398 31394 6 LASTGSGQSFLAR Unmodified 1293.6677 0.66771383 2461 Q8BUK6 Hook3 Protein Hook homolog 3 yes yes 0 0 0 0 8 0 1 54.482 54.482 2 0.00065993 16011 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.951 40.085 29.952 18.196 0 39.589 45.317 28.555 28 19 0 37 46 28 1 1 0 1 1 1 2450.1 11600 2461 11168 27075 31399 31399 1 LASTLVHLGEYQAAVDGAR Unmodified 1970.0221 0.022139011 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.6 3.88 1 1 1 1 1 71.467 71.467 3;4 1.4539E-19 24836 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.62 96.506 235.95 91.488 199.31 233.97 194.37 310.22 221 93 195 223 195 297 5 3 4 5 4 6 192650 11601 2185 11169 27076;27077;27078;27079;27080 31400;31401;31402;31403;31404;31405;31406 31402 7 LASVLNTDPALDSELTSK Unmodified 1872.968 0.96803775 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 7 0 1 79.734 79.734 3 0.0094977 28504 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.878 19.3 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 3449.9 11602 2845 11170 27081 31407 31407 1 LASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEK Unmodified 2773.4246 0.4246366 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 7.4 2.87 1 2 1 1 64.217 64.217 4;5 1.7757E-38 22021 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.352 84.294 305.92 268.05 428.13 158.69 357.3 282.5 288 269 416 158 352 271 6 6 7 4 6 6 70370 11603 1865 11171 27082;27083;27084;27085;27086 31408;31409;31410;31411;31412;31413;31414;31415 31410 8 LASVSADAEVAR Unmodified 1187.6146 0.61461563 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 6 0.816 1 1 1 50.672 50.672 2;3 1.6285E-20 15641 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.47 103.24 79.822 84.289 107 140.37 136.9 97.12 75 83 102 139 139 93 2 1 2 4 3 2 19503 11604 1424 11172 27087;27088;27089 31416;31417;31418;31419 31417 4 LASWINLTEQWPYR Unmodified 1775.8995 0.89950468 346 A0A1Y7VNF8;A0A1Y7VMH7;A0A1Y7VME9;E9Q9B7 Kidins220 yes no 0 0 0 0 11 0 1 91.363 91.363 3 0.0015954 29305 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.265 40.826 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11605 346 11173 27090 31420 31420 1 LASYLDK Unmodified 808.43307 0.43306943 659;661 CON__P13645;CON__A2A4G1;CON__P08730-1;B1AQ77;Q61414;P08730;CON__P02533;CON__P19012;CON__P08779;CON__Q99456;CON__P08727;Q9QWL7;CON__P05784;P19001;P05784;CON__Q9QWL7;CON__Q04695;CON__P19001;CON__P35527 Krt15;Krt13;Krt17;Krt19;Krt18 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 17;Keratin, type I cytoskeletal 19;Keratin, type I cytoskeletal 18 no no 0 0 0 0 10 2.16 1 1 1 61.8 61.8 2;3 0.016214 19585 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.17 52.966 756.87 573.17 708.39 509.7 583.74 443.21 712 592 711 509 595 422 3 2 3 2 3 2 79660 + 11606 659;661 11174 27091;27092;27093 31421;31422;31423 31421 3 LASYLEK Unmodified 822.44872 0.4487195 664;649;663 CON__Q9UE12;CON__Q15323;CON__Q497I4;Q497I4;CON__Q9C075;CON__P35900;CON__Q6IFU5;CON__O76011;CON__Q8IUT8;CON__Q14525 Krt35 Keratin, type I cuticular Ha5 no no 0 0 0 0 9.5 2.06 2 1 1 62.311 62.311 2;3 0.0057415 19749 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.866 39.123 48.839 58.304 241.23 111.45 163.86 1634.8 46 56 231 112 195 1538 1 1 4 2 2 4 33345 + 11607 664;649;663 11175 27094;27095;27096;27097 31424;31425;31426;31427 31424 4 LATALQK Unmodified 743.45414 0.45413923 782;926;757;905;1106;1107;1656;209;906;471 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 0 0 10.5 1.12 1 1 1 1 53.397 53.397 2 0.012754 13211 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.17 56.208 789.75 678.3 503 895.62 1128.1 1040 742 686 503 863 1152 997 5 4 3 5 6 4 399590 + 11608 905;906;1106;1107;1656;209;757;782;926;471 11176 27098;27099;27100;27101 31428;31429;31430;31431;31432;31433 31431 6 LATATFAGIENK Unmodified 1234.6558 0.65575216 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 8 0.816 1 1 1 66.438 66.438 3 1.7992E-18 20875 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 146.16 102.36 78.099 157.77 319.91 248.29 102.47 0 74 157 315 241 102 0 1 2 3 2 2 0 45542 11609 2396 11177 27102;27103;27104 31434;31435;31436 31436 3 LATCSSDR Unmodified 908.40218 0.40218001 3043 Q9D1M0 Sec13 Protein SEC13 homolog yes yes 0 0 0 0 6 0 1 30.612 30.612 2 0.048601 6269 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.207 48.063 39.464 0 39.835 0 48.116 0 37 0 37 0 46 0 1 0 1 0 1 0 3091.2 11610 3043 11178 27105 31437 31437 1 LATDKNDPHLCDFIETYYLSEQVK Unmodified 2898.3746 0.37457486 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 1 6.5 0.5 1 1 79.315 79.315 4;5 1.1865E-06 29120 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.298 35.275 49.358 38.759 64.442 88.463 62.585 77.098 46 37 65 84 65 74 1 1 2 2 1 1 10073 11611 1335 11179 27106;27107 31438;31439;31440 31438 3 LATDLTK Unmodified 760.43307 0.43306943 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 10 3 1 1 53.821 53.821 2 0.027379 17950 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.299 20.625 598.7 516.78 468.84 321.8 639.93 459.31 563 531 478 331 641 448 2 2 2 2 2 2 122570 11612 1321 11180 27108;27109 31441;31442 31442 2 LATEPLEQAVR Unmodified 1225.6667 0.6666512 3178 Q9ER72 Cars Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5 0 1 57.323 57.323 2 0.035088 19472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.284 8.8842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11613 3178 11181 27110 31443 31443 1 LATFWHYAK Unmodified 1135.5815 0.581465 2895 Q9CPQ8 Atp5l ATP synthase subunit g, mitochondrial yes yes 0 0 0 0 7.6 5.43 2 1 1 1 68.338 68.338 3 0.00011068 18028 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.52 79.696 1099.1 313.2 765.99 922.26 432.39 456.7 1030 348 758 893 454 440 6 5 5 6 5 5 192390 11614 2895 11182 27111;27112;27113;27114;27115 31444;31445;31446;31447;31448;31449 31446 6 LATGLDGVR Unmodified 900.50288 0.50288033 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 0 0 0 8.5 2.69 1 1 1 1 51.835 51.835 2 4.5654E-08 15453 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.2 102.23 750.33 358.79 906.67 841.72 607.84 698.14 706 366 896 830 641 668 4 2 4 4 4 3 98255 11615 1103;2192 11183 27116;27117;27118;27119 31450;31451;31452;31453 31451 4 LATGSDDNCAAFFEGPPFK Unmodified 2042.9044 0.90439164 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8 2.92 2 1 1 79.95 79.95 3;4 7.838E-09 29541 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.213 65.274 188.78 217.35 99.552 158.22 105.89 208.65 177 214 102 151 105 197 4 6 2 4 2 5 32724 11616 1263 11184 27120;27121;27122;27123 31454;31455;31456;31457;31458;31459;31460 31457 7 LATLETEAAQHQAVIDGLTR Unmodified 2136.1175 0.11749596 1915 Q3TDD9 Ppp1r21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 0 6 0 1 69.454 69.454 3 5.4293E-06 24504 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.469 38.236 60.088 0 0 29.921 36.338 28.811 56 0 0 28 37 28 1 0 0 1 1 1 2844.3 11617 1915 11185 27124 31461 31461 1 LATLGGSQALGLDSEIGNFEVGK Unmodified 2275.1696 0.16959111 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 7 0 1 86.135 86.135 4 5.4879E-05 31496 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.255 34.834 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 3318.9 11618 3307 11186 27125 31462 31462 1 LATLLGLQAPPTR Unmodified 1349.8031 0.8030851 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 4.67 5.19 2 1 78.805 78.805 2;3 8.6852E-11 27474 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.86 93.757 20.387 19.892 38.365 34.198 41.377 28.667 19 19 38 32 42 28 1 1 2 1 1 1 18756 11619 1438 11187 27126;27127;27128 31463;31464;31465 31463 3 LATLNEK Unmodified 787.44397 0.44396847 2746 Q91VR8 Brk1 Protein BRICK1 yes yes 0 0 0 0 11 2 1 1 50.366 50.366 2;3 0.019344 13546 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.757 14.718 295.79 261.88 199.03 214.74 329.89 371.15 278 268 197 213 337 357 2 2 1 2 2 2 14414 11620 2746 11188 27129;27130 31466;31467;31468 31466 3 LATMPPMVEGEGLASR Unmodified 1657.8168 0.81676261 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;A0A1D5RLB2;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 69.535 69.535 3 0.060177 24551 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.536 11.213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11621 3449;3451;3452 11189 27131 31469 31469 1 LATNAAVTVLR Unmodified 1127.6663 0.66625727 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 11 2.16 1 1 1 58.554 58.554 2 0.0012514 20251 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.789 34.295 167.72 153.88 324.44 141.79 290.53 174.68 158 158 315 143 288 168 1 1 3 2 2 2 24099 11622 1543 11190 27132;27133;27134 31470;31471;31472 31472 3 LATPEDKQDIDK Unmodified 1371.6882 0.6881745 3398 Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 yes no 0 0 0 1 9.5 3.5 1 1 49.45 49.45 3 0.0054544 15234 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.802 30.832 327.07 133.83 100.03 260.85 398.11 150.56 306 139 93 243 397 148 2 1 1 1 2 1 26538 11623 3398 11191 27135;27136 31473;31474 31473 2 LATPGLMIR Unmodified 970.56337 0.5633721 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 0 10 0 1 63.056 63.056 2 0.012307 17342 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.492 25.679 0 69.16 0 109.08 127.69 95.494 0 65 0 102 130 93 0 1 0 1 1 1 13660 11624 1376 11192 27137 31475 31475 1 LATPGLMIRPK Unmodified 1195.7111 0.71109897 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 1 7.6 5.43 2 1 1 1 58.923 58.923 3;4 6.8131E-08 13797 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.83 83.877 607.27 411.44 897.67 454.53 665.36 565.69 571 436 874 454 669 545 5 5 6 4 5 4 256800 11625 1376 11193 27138;27139;27140;27141;27142 31476;31477;31478;31479;31480;31481;31482 31481 7 LATPTYGDLNHLVSATMSGVTTSLR Unmodified 2604.3218 0.32175143 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 0 0 10.5 0.957 1 2 2 1 88.122 88.122 3;4 5.8446E-74 28370 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 168.4 146.73 20.227 44.211 85.781 46 100.42 22.386 19 42 81 46 96 21 1 2 3 2 3 1 217500 11626 3183 11194 27143;27144;27145;27146;27147;27148 31483;31484;31485;31486;31487;31488 31484 6 LATQLTGPVMPIR Unmodified 1395.7908 0.79080585 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 0 9.5 0.5 1 1 69.753 69.753 2 6.2191E-18 20432 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.66 101.8 20.244 28.427 0 49.428 45.194 18.964 19 28 0 46 46 19 1 1 0 1 1 1 2247.1 11627 1574 11195 27149;27150 31489;31490 31490 2 LATSLWLR Unmodified 958.56 0.56000128 2202 Q6NS82;A0A087WNS5;A0A087WNV4 Fam134a Protein FAM134A yes no 0 0 0 0 12 0 1 71.256 71.256 2 0.015932 18215 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.716 38.982 39.701 0 0 0 55.225 97.562 37 0 0 0 56 93 1 0 0 0 1 1 8572.1 11628 2202 11196 27151 31491 31491 1 LATTVSAPDLK Unmodified 1114.6234 0.6233894 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;A0A0G2JDY5;E9PZ43;A0A0G2JDN7;A0A0G2JFK3 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 8.5 2.69 1 1 1 1 60.821 60.821 2;3 2.8995E-10 19774 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 140.49 123.91 107.92 132.91 143.14 65.875 95.628 175.29 102 134 139 65 97 167 3 3 2 2 2 3 22231 11629 1464;860 11197 27152;27153;27154;27155 31492;31493;31494;31495 31493 4 LATVGELQAAWR Unmodified 1313.7092 0.70918471 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;Q8BS97 Vcan Versican core protein yes no 0 0 0 0 9.67 2.36 2 1 72.06 72.06 2;3 0.001014 26819 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.566 40.055 29.679 104.95 94.179 40.102 150.74 95.351 28 102 93 37 149 93 1 2 2 1 3 2 39443 11630 851 11198 27156;27157;27158 31496;31497;31498 31498 3 LAVAELQENGR Deamidation (N) 1199.6146 0.61461563 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 1 0 0 5 0 2 57.384 57.384 2 0.017452 19066 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.525 36.655 29.856 37.355 0 39.956 25.794 48.3 28 37 0 37 28 46 1 1 0 1 1 1 3811.1 11631 2513 11199 27159;27160 31499;31500 31500 939 2 LAVEALSSLDGDLSGR Unmodified 1601.8261 0.82606496 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 7.11 2.81 1 2 7 4 2 1 2 88.526 88.526 2;3 7.245E-68 30438 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 201.72 159.51 572.21 542.71 477.64 505.12 369.87 676.81 538 535 475 490 367 640 21 18 11 15 9 21 579890 11632 1883 11200 27161;27162;27163;27164;27165;27166;27167;27168;27169;27170;27171;27172;27173;27174;27175;27176;27177;27178;27179 31501;31502;31503;31504;31505;31506;31507;31508;31509;31510;31511;31512;31513;31514;31515;31516;31517;31518;31519;31520;31521;31522;31523;31524;31525;31526;31527;31528;31529;31530;31531;31532;31533;31534;31535 31516 35 LAVFSQPIINK Unmodified 1228.718 0.71795849 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 11.5 0.5 1 1 74.397 74.397 3 0.00030059 21992 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.958 54.773 59.504 36.74 66.978 19.021 46.111 78.634 56 37 65 19 46 75 2 1 2 1 1 2 8658.8 11633 902 11201 27180;27181 31536;31537 31536 2 LAVLITNSNVR Unmodified 1198.7034 0.70337105 3300 Q9R0N0 Galk1 Galactokinase yes yes 0 0 0 0 6.5 5.5 1 1 65.212 65.212 2 6.1778E-09 15881 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.23 114.45 23.451 48.944 26.096 18.755 106.92 29.155 22 46 25 19 104 28 1 1 1 1 2 1 15590 11634 3300 11202 27182;27183 31538;31539 31539 2 LAVNMVPFPR Unmodified 1142.627 0.62703499 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 9 4.52 2 1 1 1 2 2 73.035 73.035 2;3 1.3056E-48 21952 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 209.37 165.6 8066.2 4952.9 8167 6036.8 7643.6 8423.9 7586 5271 8084 6100 7835 8107 11 8 8 9 8 10 4660000 + 11635 1863;647;1795;2283;2805;2975;3072;3183 11203 27184;27185;27186;27187;27188;27189;27190;27191;27192 31540;31541;31542;31543;31544;31545;31546;31547;31548;31549;31550;31551;31552 31544 13 LAVNMVPFPR Deamidation (N) 1143.6111 0.61105057 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 0 9.4 2.06 1 1 1 1 1 74.951 74.951 2 2.8586E-08 27867 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.61 90.655 396.53 308.16 478.17 227.43 340.19 148.17 372 315 468 222 329 139 3 3 3 2 2 1 64313 + 11636 1863;647;1795;2283;2805;2975;3072;3183 11203 27193;27194;27195;27196;27197 31553;31554;31555;31556;31557 31557 188 5 LAVNMVPFPR Oxidation (M) 1158.6219 0.62194961 1795;2283;1863;2975;3072;3183;2805;647 P99024;CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb1;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 1 0 11 0.535 1 5 1 69.037 69.037 2;3 0.00032376 17295 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.195 39.441 109.01 27.124 49.622 50.278 76.095 38.106 102 28 46 46 74 37 3 1 1 1 2 1 20270 + 11637 1863;647;1795;2283;2805;2975;3072;3183 11203 27198;27199;27200;27201;27202;27203;27204 31558;31559;31560;31561;31562;31563;31564 31564 30 7 LAVQIGK Unmodified 727.45922 0.4592246 1042;1096;487;928 G5E829;A0A1W2P7C7;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 10.5 0.5 1 1 57.121 57.121 2 0.013137 14717 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.35 53.512 256.96 0 274.16 131.66 250.48 144.73 241 0 260 130 250 139 2 0 2 1 2 1 39221 11638 1096;1042;487;928 11204 27205;27206 31565;31566 31565 2 LAVSQVPR Unmodified 868.51305 0.51305109 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 8.5 0.5 1 1 46.474 46.474 2 0.0089146 12355 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.6 64.442 313.51 189.28 348.71 285.66 385.59 359.96 295 195 346 287 393 348 2 1 2 2 2 2 96899 11639 1537 11205 27207;27208 31567;31568 31567 2 LAVVDPLFGMQPIR Unmodified 1554.8592 0.85921977 2104 Q61024;D3Z028;D3YYR0;D3Z0C2 Asns Asparagine synthetase [glutamine-hydrolyzing] yes no 0 0 0 0 10 0 1 87.789 87.789 3 0.00094624 28309 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.11 32.712 0 39.368 20.558 9.837 0 29.848 0 37 19 9 0 28 0 1 1 1 0 1 1783.2 11640 2104 11206 27209 31569;31570 31570 2 LAWAQQLCLLPR Unmodified 1467.802 0.80203924 442 A2ACC7;F8WHN4;A2ACC6;E9Q0J2;Q8BQZ4 Ralgapb Ral GTPase-activating protein subunit beta yes no 0 0 0 0 1 0 1 83.78 83.78 2 0.0046798 29483 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.91 38.762 0 9.576 0 30.604 0 0 0 9 0 28 0 0 0 1 0 1 0 0 718.55 11641 442 11207 27210 31571 31571 1 LAWTGIQEHLVSTGFNQMR Unmodified 2187.0895 0.089507069 3053 Q9D2V7;G3X9L5;E9PYU1 Coro7 Coronin-7;Coronin yes no 0 0 0 0 10 0 1 75.098 75.098 3 0.00036392 22671 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.819 31.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11642 3053 11208 27211 31572 31572 1 LAWVSHDSTVSVADASK Unmodified 1771.8741 0.87407779 3303 Q9R0Q6;A0A0G2JF52 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 8.5 0.5 1 1 60.675 60.675 3 2.2952E-07 18940 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.36 87.298 97.837 64.331 93.25 67.861 66.005 127.1 92 65 93 65 65 121 2 1 2 1 1 2 17530 11643 3303 11209 27212;27213 31573;31574 31573 2 LAYIADHLGFSWTELAR Unmodified 1961.9999 0.99994701 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 11 0 1 89.864 89.864 3 0.011888 28773 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.777 19.454 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 5029.2 11644 3449;3451 11210 27214 31575 31575 1 LAYINPDLALEEK Unmodified 1487.7872 0.78716026 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 77.206 77.206 2;3 1.0563E-08 29399 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.01 84.517 277.6 206.98 55.999 206.29 243.42 339.5 260 213 56 195 250 325 5 5 1 4 4 5 57788 11645 2092 11211 27215;27216;27217;27218;27219 31576;31577;31578;31579;31580 31580 5 LAYNESEDR Unmodified 1095.4833 0.4832671 2679 Q8VBY2;B1AUD3 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes no 0 0 0 0 4 0 1 39.92 39.92 2 0.0077239 11459 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.264 20.405 0 0 0 39.963 25.427 58.97 0 0 0 37 28 56 0 0 0 1 1 1 3587.1 11646 2679 11212 27220 31581 31581 1 LAYRPPK Unmodified 843.49667 0.49667274 3030 Q9D0M3 Cyc1 Cytochrome c1, heme protein, mitochondrial yes yes 0 0 0 1 12 0 1 42.146 42.146 3 0.056724 7371 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.994 25.491 127.49 88.025 139.44 113.01 0 108.73 120 93 139 111 0 102 1 1 1 1 0 1 3824.6 11647 3030 11213 27221 31582 31582 1 LAYVAAGDLAPINAFIGGLAAQEVMK Unmodified 2602.3829 0.38289512 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 10.8 1.33 1 1 2 1 107.67 107.67 3;4 1.341E-20 35311 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.211 72.196 28.939 9 33.361 22.953 0 6.396 27 9 33 21 0 6 3 1 2 2 0 1 18747 11648 1876 11214 27222;27223;27224;27225;27226 31583;31584;31585;31586;31587;31588 31587 6 LAYVTPTIPR Unmodified 1129.6495 0.64954457 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 0 9 0 1 63.31 63.31 2 0.00017601 19498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.933 60.515 39.414 56.926 0 0 0 69.29 37 56 0 0 0 65 1 1 0 0 0 1 5065.1 11649 3131 11215 27227 31589 31589 1 LCAATATILDKPEDR Unmodified 1672.8454 0.8454202 1182 O35215 Ddt D-dopachrome decarboxylase yes yes 0 0 0 1 10 2.16 1 1 1 61.667 61.667 3 2.7733E-36 19518 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 177.36 153.07 327.13 86.162 129.37 307.8 426.29 333.22 306 93 130 296 432 324 2 1 1 2 2 2 31880 11650 1182 11216 27228;27229;27230 31590;31591;31592 31590 3 LCAIPNLR Unmodified 955.52732 0.52732094 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 10.7 1.7 1 1 1 59.57 59.57 2 2.0404E-06 17798 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 164.78 91.159 813.14 824.3 776.83 735.73 1133.9 811.92 766 829 793 735 1143 792 3 2 2 3 3 3 174740 11651 1321 11217 27231;27232;27233 31593;31594;31595 31593 3 LCALLYGDSGKPAEGGGSVTSR Unmodified 2194.0688 0.068831207 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 1 9 0 1 63.829 63.829 3 5.4212E-09 19690 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.936 46.567 0 0 0 39.019 75.612 0 0 0 0 37 74 0 0 0 0 1 1 0 10859 11652 1579 11218 27234 31596 31596 1 LCALYGK Unmodified 823.42621 0.42620992 2021 Q3V156;Q91XL9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 0 11 0 1 58.776 58.776 2 0.025127 15138 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.84 74.616 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11653 2021 11219 27235 31597 31597 1 LCCGLSMFEVILTR Unmodified 1697.8303 0.83030418 2057;2282 Q7TMB8;A0A0R4J119;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 11 0 1 95.493 95.493 3 3.9199E-05 31187 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.696 43.311 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 3675.4 11654 2282;2057 11220 27236 31598 31598 1 LCDEQLSSQSHYDFGLR Unmodified 2053.9164 0.91635331 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 60.881 60.881 3 0.017083 20544 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.334 20.211 0 0 30.296 0 28.291 29.041 0 0 28 0 28 28 0 0 1 0 1 1 2790.9 11655 3204 11221 27237 31599 31599 1 LCDFGSAK Unmodified 896.4062 0.40620276 947;787 D3Z7E5;Q2NL51;E9QAQ5;Q9WV60 Gsk3a;Gsk3b Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 0 7 0 1 55.191 55.191 2 0.064345 16867 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.019 6.2443 68.999 82.735 55.28 0 0 69.29 65 83 56 0 0 65 1 1 1 0 0 1 6030.7 11656 787;947 11222 27238 31600 31600 1 LCDFGVSGQLIDSMANSFVGTR Unmodified 2373.1093 0.10931581 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 0 10.4 1.5 2 1 1 1 96.895 96.895 3;4 2.2021E-18 34696 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.67 93.981 28.657 35.112 0 59.606 27.08 68.517 28 33 0 55 28 65 2 2 0 4 2 3 29055 11657 1500 11223 27239;27240;27241;27242;27243 31601;31602;31603;31604;31605 31601 5 LCDFNPK Unmodified 892.41129 0.41128813 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 9.33 2.62 1 1 1 56.213 56.213 2 0.025583 16859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.45 31.061 959.49 780.84 1102.6 853.81 971.12 642.34 904 812 1102 858 987 623 3 3 3 3 3 2 113690 11658 599;600 11224 27244;27245;27246 31606;31607;31608 31607 3 LCDSYEIRPGK Unmodified 1336.6445 0.64453555 2719 Q8VHM5;A2AW41;F7B5B5 Hnrnpr yes no 0 0 0 1 7 0 1 50.395 50.395 3 0.007615 14672 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.542 44.851 39.07 86.189 33.032 36.674 95.593 0 37 84 37 37 93 0 1 1 1 1 1 0 3651.5 11659 2719 11225 27247 31609 31609 1 LCEAICPAQAITIEAEPR Unmodified 2040.9972 0.99724617 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 9 4 1 1 72.487 72.487 3 3.6285E-22 27033 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.85 77.985 50.174 27.776 19.583 19.6 19.874 0 47 28 19 19 19 0 2 1 1 1 1 0 8977.4 11660 2614 11226 27248;27249 31610;31611;31612 31612 3 LCELLSEQF Unmodified 1137.5376 0.53761086 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 91.142 91.142 2 0.00060745 33816 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.29 91.719 19.138 122.45 75.955 20.767 38.702 45.838 18 118 74 19 37 43 2 4 2 1 1 2 34782 11661 1401 11227 27250;27251;27252;27253 31613;31614;31615;31616;31617 31616 5 LCFSTAQHAS Unmodified 1120.4971 0.49714303 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 7 0 1 49.073 49.073 2 0.011159 14046 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.836 52.61 29.807 46.934 0 0 0 59.696 28 46 0 0 0 56 1 1 0 0 0 1 2030.6 11662 1110 11228 27254 31618 31618 1 LCFVGLMSMIDPPR Unmodified 1634.7983 0.79827577 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 8.17 5.11 2 2 1 1 97.32 97.32 3 5.8309E-22 27629 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 139.89 111.59 0 25.448 15.683 74.088 61.112 36.542 0 24 15 69 62 35 0 3 3 5 4 4 19311 11663 2253 11229 27255;27256;27257;27258;27259;27260 31619;31620;31621;31622;31623;31624;31625;31626;31627;31628;31629 31627 11 LCLISTFLEDGIR Unmodified 1535.8018 0.80176447 800 E0CXD9;F7CH13;Q64310 Surf4 Surfeit locus protein 4 yes no 0 0 0 0 10 0 1 96.498 96.498 3 0.0084301 31558 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.88 4.8384 0 0 0 9.2942 28.861 0 0 0 0 9 28 0 0 0 0 1 1 0 1068.1 11664 800 11230 27261 31630 31630 1 LCQLCPGCGCSSTQPFFGYVGAFK Unmodified 2740.1906 0.19061938 2797 Q921I1;E9Q035;D3YYR8 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 10.5 0.5 1 1 85.938 85.938 4 9.8215E-06 27144 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.834 39.401 0 33 0 0 37 0 0 33 0 0 37 0 0 1 0 0 1 0 11699 11665 2797 11231 27262;27263 31631;31632 31632 2 LCSDFLK Unmodified 881.43169 0.43168922 2630 Q8R0A7;Q3TA40 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 8 0 1 64.636 64.636 2 0.048072 20807 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.058 35.831 127.61 67.859 135.95 0 131.35 134.83 120 74 130 0 130 130 1 1 1 0 1 1 4091.1 11666 2630 11232 27264 31633 31633 1 LCSGVLGTVVHGK Unmodified 1325.7126 0.71255553 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 10.5 0.5 1 1 59.037 59.037 3 0.00010755 15678 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.24 51.448 381.71 142.62 467.61 173.35 464.42 133.73 359 148 449 180 456 130 2 1 2 1 2 1 33722 11667 2278 11233 27265;27266 31634;31635 31634 2 LCSIPIHGIR Unmodified 1164.6437 0.64374769 2819 Q924B0;O55023;Q80ZJ2 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 11 0 1 53.894 53.894 3 0.0070626 13178 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.461 31.905 0 0 110.36 0 0 99.138 0 0 102 0 0 93 0 0 1 0 0 1 6359.9 11668 2819 11234 27267 31636 31636 1 LCSLFYTNEEVAK Unmodified 1572.7494 0.74939455 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 9 0 1 73.982 73.982 3 5.2956E-07 24495 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.204 62.347 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11669 2602 11235 27268 31637 31637 1 LCTFILK Unmodified 893.50446 0.50446024 1661 P59325;Q8BVV6;A0A1Y7VNP4;A0A1Y7VJG2 Eif5 Eukaryotic translation initiation factor 5 yes no 0 0 0 0 11.5 0.5 1 1 72.889 72.889 2 0.019297 18846 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.09 26.128 157.72 153.6 232.08 200.59 164.08 237.3 149 158 232 199 167 227 2 2 2 2 1 2 31545 11670 1661 11236 27269;27270 31638;31639 31639 2 LCTFTITQK Unmodified 1110.5743 0.57433072 496 A2AN08;F6SSP6 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 10 0 1 63.925 63.925 2 0.0043471 17737 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.827 41.727 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11671 496 11237 27271 31640 31640 1 LCTGHEYAAK Unmodified 1148.5284 0.52844316 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 8.5 2.69 1 1 1 1 39.551 39.551 3 6.956E-06 8991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.6 86.883 1014.7 731.79 514.91 875.62 570 1250.1 952 734 497 839 596 1188 4 3 2 4 3 4 141990 11672 1475 11238 27272;27273;27274;27275 31641;31642;31643;31644 31643 4 LCTSATESEVTR Unmodified 1352.6242 0.62419403 2998 Q9CZ13;A0A0A6YWX6 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 6.4 3.38 2 1 1 1 43.36 43.36 2;3 5.8869E-104 12846 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 242.97 191.88 396.12 291.51 83.222 48.038 171.41 183.83 371 296 83 46 167 176 5 4 2 1 2 2 94085 11673 2998 11239 27276;27277;27278;27279;27280 31645;31646;31647;31648;31649 31649 5 LCTVATLR Unmodified 932.51134 0.51133653 655 CON__P02768-1 yes yes 0 0 0 0 9 0 1 52.581 52.581 2 0.044487 14324 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.88 27.558 0 0 86.872 65.867 0 88.478 0 0 83 65 0 83 0 0 1 1 0 1 5792.1 + 11674 655 11240 27281 31650 31650 1 LCVLHEK Unmodified 897.47422 0.47422274 656 CON__P02769 yes yes 0 0 0 0 8.5 0.5 1 1 46.692 46.692 3 0.0073831 12548 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.18 22.62 0 0 207.94 129.7 0 128.99 0 0 195 130 0 121 0 0 1 2 0 2 114920 + 11675 656 11241 27282;27283 31651;31652 31651 2 LCVPAMNVNDSVTK Unmodified 1546.7483 0.74834869 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 10 2.16 1 1 1 66.764 66.764 3 4.4419E-05 21133 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.078 49.743 118.19 216.09 217.72 115.06 224 173.8 111 214 213 121 222 166 1 3 2 2 2 2 30367 11676 2298;1040 11242 27284;27285;27286 31653;31654;31655 31654 3 LCYFTLPFGESQVAICDGSFTIPDNSR Unmodified 3093.4212 0.42120748 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 9 0 1 96.849 96.849 3 8.6218E-17 34700 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.06 60.255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2548.3 11677 1983 11243 27287 31656 31656 1 LCYHVLGTDQSEDILCAEFPDEPK Unmodified 2835.2731 0.27314626 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 5 0 1 77.996 77.996 4 0.0022903 29194 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.583 22.687 20.157 0 38.672 28.299 0 29.848 19 0 37 28 0 28 1 0 1 1 0 1 1662.5 11678 3259 11244 27288 31657 31657 1 LCYNSNHENLKPQYLEQLPAQLK Unmodified 2799.4014 0.40139873 1584 P48774;E9PVM7;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 1 8 0 1 67.384 67.384 4 9.0317E-13 22054 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.029 57.901 59.82 0 45.062 98.963 0 39.442 56 0 46 93 0 37 1 0 1 1 0 1 9181.2 11679 1584 11245 27289 31658 31658 1 LCYVALDFENEMATAASSSSLEK Oxidation (M) 2551.1458 0.14582048 1791 P68033;P68134;P62737;P63268;A0A0U1RQ96 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 1 0 7 0 1 101.25 101.25 4 0.00032435 36765 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.423 19.006 6.3892 0 8.2074 9.3478 0 9.594 6 0 8 9 0 9 1 0 1 1 0 1 586.79 11680 1791 11246 27290 31659 31659 143 1 LCYVALDFENEMATAASSSSLEK Deamidation (N) 2536.1349 0.13492144 1791 P68033;P68134;P62737;P63268;A0A0U1RQ96 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 1 0 0 13 0 1 95.093 95.093 4 0.00015326 38045 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.973 35.359 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 2112.9 11681 1791 11246 27291 31660 31660 717 1 LCYVALDFEQEMATAASSSSLEK Unmodified 2549.1666 0.16655592 1673;1781 P60710;E9Q1F2;E9Q5F4;P63260 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 9.47 3.59 2 2 5 5 1 1 2 2 3 13 101.36 101.36 3;4;5 6.9468E-67 36770 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 163.91 148.21 1461.7 986.8 1931.4 1617.4 1137.3 2098 1373 1012 1882 1587 1143 1987 36 36 36 38 33 36 702480 11682 1673;1781 11247 27292;27293;27294;27295;27296;27297;27298;27299;27300;27301;27302;27303;27304;27305;27306;27307;27308;27309;27310;27311;27312;27313;27314;27315;27316;27317;27318;27319;27320;27321;27322;27323;27324;27325;27326;27327 31661;31662;31663;31664;31665;31666;31667;31668;31669;31670;31671;31672;31673;31674;31675;31676;31677;31678;31679;31680;31681;31682;31683;31684;31685;31686;31687;31688;31689;31690;31691;31692;31693;31694;31695;31696;31697;31698;31699;31700;31701;31702;31703;31704;31705;31706;31707;31708;31709;31710;31711;31712;31713;31714;31715;31716;31717;31718;31719;31720;31721;31722;31723;31724;31725;31726;31727;31728;31729 31677 69 LCYVALDFEQEMATAASSSSLEK Oxidation (M) 2565.1615 0.16147054 1673;1781 P60710;E9Q1F2;E9Q5F4;P63260 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 1 0 6 0.632 1 3 1 86.786 86.786 3;4 8.6772E-24 36779 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.483 74.869 40.686 37.519 36.358 71.333 18.003 69.29 38 37 37 66 19 65 2 2 2 2 1 2 9151.8 11683 1673;1781 11247 27328;27329;27330;27331;27332 31730;31731;31732;31733;31734 31733 122 5 LCYVGYNIEQEQK Unmodified 1642.7661 0.76610724 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 9.33 2.62 1 1 1 64.499 64.499 2;3 2.1604E-15 21492 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.06 87.538 609.58 377.23 562.22 476.69 535.42 585.95 573 402 563 476 545 564 2 2 2 2 1 2 34193 11684 1690 11248 27333;27334;27335 31735;31736;31737 31735 3 LDADGFLYITGR Unmodified 1339.6772 0.67721588 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 7 0 1 79.477 79.477 2 0.00095581 28379 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.64 34.82 49.01 25.877 36.53 38.264 0 0 46 28 37 37 0 0 1 1 1 1 0 0 4254 11685 2890 11249 27336 31738 31738 1 LDADYPLR Unmodified 961.4869 0.48689592 873 E9Q0G1;Q9CQJ6 Denr Density-regulated protein yes no 0 0 0 0 5 0 1 56.95 56.95 2 0.010093 19275 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.523 55.457 78.352 35.62 146.24 36.485 0 69.29 74 37 139 37 0 65 2 1 2 1 0 1 5335 11686 873 11250 27337 31739;31740 31740 2 LDAFIEALHQEK Unmodified 1412.73 0.72997974 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 9.5 0.5 1 1 79.094 79.094 3 2.3529E-08 26892 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.29 76.608 108.77 0 114.01 124.36 0 69.29 102 0 111 120 0 65 1 0 1 1 0 1 21275 11687 1653 11251 27338;27339 31741;31742 31741 2 LDAFIYDAAVLNYK Unmodified 1614.8294 0.82935943 1519 P35436 Grin2a Glutamate receptor ionotropic, NMDA 2A yes yes 0 0 0 0 9 0 1 93.875 93.875 3 0.023652 33611 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.424 25.341 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 5098.5 11688 1519 11252 27340 31743 31743 1 LDAFIYDAAVLNYMAGR Unmodified 1901.9346 0.93456956 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 9 0.816 1 1 1 101.98 101.98 3 0.023953 36017 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.771 23.411 9.657 0 6.492 0 17.782 20.254 9 0 6 0 17 19 1 0 1 0 1 1 2165.8 11689 1089 11253 27341;27342;27343 31744;31745;31746 31744 3 LDAFVEGVVK Unmodified 1075.5914 0.59136099 3376 Q9Z1G3;A0A2I3BPD0 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 8 0.816 1 1 1 79.503 79.503 2;3 4.6491E-07 27809 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.57 85.221 384.5 471.52 284.73 246.25 425.08 709.55 362 472 287 241 435 677 5 6 3 3 5 7 31930 11690 3376 11254 27344;27345;27346 31747;31748;31749;31750;31751;31752;31753 31750 7 LDAFVEGVVKK Unmodified 1203.6863 0.68632401 3376 Q9Z1G3;A0A2I3BPD0 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 1 9 0 1 73.576 73.576 3 0.0050301 24265 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.49 18.95 118.11 89.469 90.862 85.304 0 0 111 93 93 83 0 0 1 1 1 1 0 0 9653.9 11691 3376 11255 27347 31754 31754 1 LDALDQLLEEAK Unmodified 1356.7137 0.71366097 437 A2A9W7;Q8BMI3;S4R2D2 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 0 0 0 0 9.5 3.5 1 1 93.658 93.658 3 0.00052891 37406 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.563 44.312 40.631 28.427 0 20.234 28.359 20.254 38 28 0 19 28 19 2 1 0 1 1 1 3362.9 11692 437 11256 27348;27349 31755;31756 31756 2 LDALQTFIR Unmodified 1075.6026 0.60259438 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 79.024 79.024 2 0.0010158 30310 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.21 53.048 304.22 328.47 382.35 425.41 266.42 291.38 287 334 389 417 270 278 3 4 4 5 3 2 125580 11693 2301 11257 27350;27351;27352;27353;27354;27355 31757;31758;31759;31760;31761;31762 31762 6 LDASESLR Unmodified 889.45051 0.45051041 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.33 4.03 1 1 1 45.697 45.697 2 0.0075608 13939 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.14 35.96 418.3 71.551 328.23 236.32 340.12 0 392 74 319 239 338 0 2 1 2 2 3 0 48873 11694 2185 11258 27356;27357;27358 31763;31764;31765 31764 3 LDASLIIK Unmodified 871.53787 0.53786886 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 8 0 1 71.881 71.881 2 0.0073953 24159 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.57 21.092 109.45 0 0 0 0 78.884 102 0 0 0 0 74 1 0 0 0 0 1 4976.4 11695 3194 11259 27359 31766 31766 1 LDCAQLK Unmodified 846.42694 0.4269382 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8.4 2.42 1 1 2 1 51.66 51.66 2;3 0.022688 16837 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.92 34.574 1024.7 829.28 1076.8 536.53 1305.6 1637.4 964 828 1068 540 1306 1571 5 5 6 4 5 6 245960 11696 1390 11260 27360;27361;27362;27363;27364 31767;31768;31769;31770;31771;31772 31772 6 LDCPFFGSPIPTLR Unmodified 1618.8177 0.81774888 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 10.7 1.7 1 1 1 83.985 83.985 3 0.0003226 29033 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.044 37.047 0 0 30.296 0 27.961 38.644 0 0 28 0 28 37 0 0 1 0 1 1 13217 11697 20;2354 11261 27365;27366;27367 31773;31774;31775 31773 3 LDCSQGYTEENTIFAPR Unmodified 1999.8946 0.89455524 3019 Q9D0B6 Pbdc1 Protein PBDC1 yes yes 0 0 0 0 5 0 1 66.106 66.106 3 0.0048566 23520 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.118 17.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11698 3019 11262 27368 31776 31776 1 LDDCPPAHTNR Unmodified 1294.5724 0.57243324 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 0 3 0 1 31.492 31.492 3 0.032384 8086 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.543 23.17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11699 48 11263 27369 31777 31777 1 LDDDDEGVPSSALR Unmodified 1487.674 0.673981 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 0 2.33 0.471 2 1 55.522 55.522 2 0.0051019 18564 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.598 22.241 50.181 46.148 28.507 20.259 27.029 58.925 47 47 28 19 28 56 2 3 2 1 1 2 16468 11700 78 11264 27370;27371;27372 31778;31779;31780 31778 3 LDDDFKEMER Unmodified 1296.5656 0.56561652 491 A2ALV3;Q62420;Q8BXU5;A2ALV1 Sh3gl2 Endophilin-A1 yes no 0 0 0 1 4.5 0.5 1 1 56.958 56.958 3 8.2724E-05 19632 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.93 72.588 307.81 221.75 196.39 216.05 268.83 76.314 289 231 195 213 269 74 2 2 1 2 2 1 33195 11701 491 11265 27373;27374 31781;31782 31781 2 LDDIFEPVLIPEPK Unmodified 1623.876 0.87597527 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 6 0 1 92.61 92.61 3 0.0017294 35057 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.754 31.995 0 0 20.558 0 9.0934 9.3345 0 0 19 0 9 9 0 0 1 0 1 1 1562.2 11702 178 11266 27375 31783 31783 1 LDDLDCPR Unmodified 1002.444 0.44404482 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 6.67 4.5 1 1 1 50.391 50.391 2 0.012022 17051 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.069 27.65 217.25 0 276.45 182 198.22 283.23 204 0 264 185 203 271 2 0 2 2 1 2 23583 11703 2077 11267 27376;27377;27378 31784;31785;31786 31784 3 LDDLINWAR Unmodified 1114.5771 0.57710791 3138 Q9DC70 Ndufs7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 82.701 82.701 2 7.3212E-06 29313 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 154.28 93.69 128.29 92.978 0 50.278 165.27 0 120 93 0 46 158 0 2 1 0 1 1 0 28982 11704 3138 11268 27379;27380;27381 31787;31788;31789 31787 3 LDDLVSTGK Unmodified 946.49713 0.49712625 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 7 0 1 63.137 63.137 2 0.025361 20718 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.161 22.858 54.407 0 53.033 42.088 34.936 53.369 51 0 51 42 37 51 1 0 1 1 1 1 4241.3 11705 2744 11269 27382 31790 31790 1 LDDNEALIEK Unmodified 1158.5768 0.57683314 1377 P14576 Srp54 Signal recognition particle 54 kDa protein yes yes 0 0 0 0 4 0 1 61.439 61.439 3 0.020686 21629 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.592 23.366 0 20.216 0 40.441 0 29.848 0 19 0 37 0 28 0 1 0 1 0 1 1628.9 11706 1377 11270 27383 31791 31791 1 LDDPLHLR Unmodified 977.52943 0.52942943 3239 Q9JKY5 Hip1r Huntingtin-interacting protein 1-related protein yes yes 0 0 0 0 5 0 1 55.405 55.405 3 0.061142 18567 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.029 18.01 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1314.9 11707 3239 11271 27384 31792 31792 1 LDDSSDQAR Unmodified 1005.4363 0.43631691 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R208;S4R278 Ank3 Ankyrin-3 yes no 0 0 0 0 2.5 0.5 1 1 32.449 32.449 2 3.595E-05 8202 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 135 94.73 108.52 130.24 45.35 46.38 157.87 153.26 102 130 46 46 158 148 2 2 1 1 2 2 12515 11708 3450 11272 27385;27386 31793;31794 31793 2 LDEDLAGYCR Unmodified 1210.5288 0.52883709 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 7.33 4.03 1 1 1 57.043 57.043 2 4.6491E-07 19799 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.57 90.233 345.24 230.67 257.39 230.16 429.61 66.385 324 234 259 232 423 65 3 2 3 3 3 1 91866 11709 1390 11273 27387;27388;27389 31795;31796;31797;31798 31796 4 LDEEHPELR Unmodified 1136.5462 0.54620171 3001 Q9CZC8 Scrn1 Secernin-1 yes yes 0 0 0 0 2 0.816 1 1 1 41.145 41.145 3 6.5963E-06 12374 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.08 101.7 207.67 274.98 360.06 218.87 483.22 256.5 195 269 358 222 480 250 3 3 4 2 3 2 118260 11710 3001 11274 27390;27391;27392 31799;31800;31801;31802 31800 4 LDEELEDAEK Unmodified 1189.535 0.5350279 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 2 0 1 60.752 60.752 2 0.02481 21119 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.433 30.265 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 962.05 11711 2829 11275 27393 31803 31803 1 LDEGTIQWIVDQAAAK Unmodified 1756.8996 0.89956426 2261 Q6ZPE2 Sbf1 Myotubularin-related protein 5 yes yes 0 0 0 0 8 0 1 94.737 94.737 3 4.5828E-05 34243 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.932 67.551 9.5959 12.121 0 27.325 0 0 9 12 0 25 0 0 1 1 0 1 0 0 2074 11712 2261 11276 27394 31804 31804 1 LDEILAAAQQTISASESPGPGGLASLGK Unmodified 2680.3919 0.39193948 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 9 0 1 104.38 104.38 5 0.046784 36763 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 25.726 12.797 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 1624.5 11713 732 11277 27395 31805 31805 1 LDEIYVAGLVAHSDLDER Unmodified 2014.0007 0.0007348666 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UWM1;G3XA76 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 6 0 1 79.101 79.101 3 0.029633 29019 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 32.627 20.244 20.215 0 28.947 27.997 46.897 28.51 19 0 28 28 47 28 1 0 1 1 1 1 1710.4 11714 218 11278 27396 31806 31806 1 LDELGVPLYAVVK Unmodified 1414.8072 0.80716742 1953 Q3U125;Q9CYH2;D3YYG8;D3Z398;D3Z252;D3Z0A8 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 0 9.25 2.28 1 1 1 1 88.183 88.183 2;3 3.4104E-07 31085 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.93 76.735 49.7 64.672 68.007 101.65 57.278 116.69 47 65 65 93 56 111 2 2 1 2 1 3 16465 11715 1953 11279 27397;27398;27399;27400 31807;31808;31809;31810 31809 4 LDENSAFLQFNWK Unmodified 1610.7729 0.77290718 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9 1.91 1 2 2 1 84.788 84.788 2;3;4 3.5877E-13 29460 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.72 99.601 69.372 191.4 76.072 208.88 108.63 255.41 65 185 74 195 113 242 2 5 2 5 4 6 70187 11716 551 11280 27401;27402;27403;27404;27405;27406 31811;31812;31813;31814;31815;31816;31817 31816 7 LDEQGLNYQQK Unmodified 1334.6466 0.64664404 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 5 0 1 53.858 53.858 3 0.011623 17806 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.632 26.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11717 2033 11281 27407 31818 31818 1 LDETGNLMISEGHFASETIR Unmodified 2219.0528 0.052846792 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5 0.816 1 1 1 69.427 69.427 3 1.5038E-38 25073 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 144.57 107.48 70.275 75.986 26.926 47.428 66.189 0 66 75 28 46 65 0 3 2 1 3 2 0 25287 11718 551 11282 27408;27409;27410 31819;31820;31821 31820 3 LDFGNFQGK Unmodified 1024.4978 0.49779495 3084 Q9D7X8;A0A0N4SVX8;A0A0N4SWE8 Ggct Gamma-glutamylcyclotransferase yes no 0 0 0 0 9 0 1 67.662 67.662 2 0.054219 21506 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.064 16.771 78.767 62.955 53.454 66.523 71.013 97.112 74 65 56 65 74 93 1 1 1 1 1 1 7307.7 11719 3084 11283 27411 31822 31822 1 LDFLRPFSVPNK Unmodified 1431.7874 0.78743503 1800 P70195 Psmb7 Proteasome subunit beta type-7 yes yes 0 0 0 1 6.5 5.5 1 1 76.936 76.936 3 0.0024686 20452 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.423 12.783 247.36 100.53 0 219.46 128.7 67.48 231 102 0 203 130 65 3 2 0 3 2 1 30131 11720 1800 11284 27412;27413 31823;31824;31825 31824 3 LDFPAMK Unmodified 820.41531 0.41531088 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 8 0 1 68.036 68.036 2 0.027422 22415 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.407 23.495 228.37 162.3 253.93 297.46 0 214.27 215 171 257 286 0 201 1 1 1 1 0 1 15898 11721 2897 11285 27414 31826 31826 1 LDFVCSFLQK Unmodified 1255.6271 0.62709457 262 A0A1B0GT38;A0A1B0GSH2;A0A1B0GT61;A0A1B0GSW3;E9Q7G0 Numa1 yes no 0 0 0 0 11.5 0.5 1 1 89.424 89.424 3 0.0021206 25452 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.347 41.36 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 3905.2 11722 262 11286 27415;27416 31827;31828 31828 2 LDGAWWFLR Unmodified 1162.5924 0.59236404 1118 Q99JR5;H3BJ97 Tinagl1 Tubulointerstitial nephritis antigen-like yes no 0 0 0 0 11 0 1 90.475 90.475 2 0.021755 29116 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.48 32.976 0 0 31.639 18.425 24.258 0 0 0 30 19 24 0 0 0 1 1 1 0 7229.1 11723 1118 11287 27417 31829 31829 1 LDGETIPHFPANQEVLNK Unmodified 2021.0218 0.02180466 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 6 0 1 67.012 67.012 3 8.7398E-11 23333 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.95 61.461 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11724 1558 11288 27418 31830 31830 1 LDGLVDTPTGYIESLPK Unmodified 1816.9458 0.94584575 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 5.5 0.5 1 1 83.924 83.924 3 4.5529E-09 31171 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.29 88.144 21.239 33.096 34.911 19.434 53.801 21.661 20 33 35 19 53 21 1 2 2 1 2 1 7631.3 11725 833 11289 27419;27420 31831;31832 31832 2 LDGSTSHQNLR Unmodified 1226.6004 0.60036255 2289 Q7TPM6 Fsd1 Fibronectin type III and SPRY domain-containing protein 1 yes yes 0 0 0 0 5 0 1 31.929 31.929 3 0.0016306 7270 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.401 34.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11726 2289 11290 27421 31833 31833 1 LDGTIWLGPNAVLAFK Unmodified 1713.9454 0.94539224 2774 Q91YP0 L2hgdh L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 96.093 96.093 3 0.00014046 31488 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.136 47.297 0 0 0 0 19 19 0 0 0 0 19 19 0 0 0 0 1 1 4187.3 11727 2774 11291 27422;27423 31834;31835 31834 2 LDHALSSPSSPCEEIK Unmodified 1768.8302 0.83016406 2386 Q8BGT8 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes yes 0 0 0 0 5 0 1 54.384 54.384 3 0.000484 18031 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.164 36.606 29.521 36.424 57.046 27.204 0 49.036 28 37 56 28 0 46 1 1 1 1 0 1 4207.1 11728 2386 11292 27424 31836 31836 1 LDHAWAGIAR Unmodified 1108.5778 0.57777661 972 E9QNR6;Q8VD62 AI837181;Bles03 UPF0696 protein C11orf68 homolog yes no 0 0 0 0 8 0 1 53.476 53.476 3 0.0044813 15436 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.955 35.398 39.564 27.124 0 70.416 33.45 58.741 37 28 0 65 37 56 1 1 0 1 1 1 3863.6 11729 972 11293 27425 31837 31837 1 LDHEEEPQLSEPYLSK Unmodified 1912.9054 0.9054375 426 A2A5H8;Q3USC7;Q8VE33 Gdap1l1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 0 3 0 1 60.237 60.237 3 0.00014664 21445 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.965 50.842 20.292 18.848 0 0 19.197 19.706 19 19 0 0 19 19 1 1 0 0 1 1 3045.7 11730 426 11294 27426 31838 31838 1 LDHKFDLMYAK Oxidation (M) 1395.6857 0.68567208 1313;1794;44;3223;2013 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2;Q3UX10 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8;Tubal3 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3 no no 0 0 1 1 8 0 1 58.65 58.65 4 0.03045 17864 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.836 35.303 78.87 0 89.408 0 0 127.92 74 0 83 0 0 120 1 0 1 0 0 1 8266.3 11731 44;1313;1794;3223;2013 11295 27427 31839 31839 3 1 LDHKFDLMYAK Unmodified 1379.6908 0.69075746 1313;1794;44;3223;2013 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2;Q3UX10 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8;Tubal3 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3 no no 0 0 0 1 9.71 1.67 2 2 1 1 1 63.998 63.998 3;4 0.00022542 19802 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.937 62.961 2517.8 1313.2 2847.6 2695.4 2313.9 3250.3 2368 1412 2784 2657 2415 3109 8 6 7 9 7 9 431120 11732 44;1313;1794;3223;2013 11295 27428;27429;27430;27431;27432;27433;27434 31840;31841;31842;31843;31844;31845;31846;31847;31848;31849 31843 10 LDHLAEK Unmodified 824.43922 0.43921744 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 6 0.816 1 1 1 46.362 46.362 3 0.0055574 12765 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.616 44.59 425.25 472.49 444.36 440.57 272.27 504.98 401 478 457 432 278 481 3 3 3 3 1 3 39842 11733 418;310 11296 27435;27436;27437 31850;31851;31852 31852 3 LDHYAIIK Unmodified 971.54402 0.54401687 1735 P62751 Rpl23a 60S ribosomal protein L23a yes yes 0 0 0 0 13 0 1 54.926 54.926 3 0.010617 18709 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.962 24.771 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 4716.6 11734 1735 11297 27438 31853 31853 1 LDHYPAVGYHLPSSSDTLFNSPK Unmodified 2544.2285 0.22850297 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 8 0 1 66.853 66.853 4 0.0047062 21859 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.676 22.999 39.511 37.768 0 0 56.581 58.081 37 38 0 0 56 56 1 1 0 0 1 1 2080.6 11735 970 11298 27439 31854 31854 1 LDIDSAPITAR Unmodified 1170.6245 0.62445203 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0;A0A1L1ST52;A0A1L1SVH2 Pkm Pyruvate kinase PKM yes no 0 0 0 0 7.17 2.91 1 1 1 1 1 1 60.097 60.097 2 1.0833E-80 20982 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 231.38 133.15 1137 483.07 913.73 994.7 1150.2 968.15 1067 495 900 977 1164 928 8 4 5 7 7 7 569510 11736 1609 11299 27440;27441;27442;27443;27444;27445 31855;31856;31857;31858;31859;31860;31861;31862;31863 31857 9 LDILDMFTEIK Unmodified 1336.6948 0.69483978 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 10 2.16 1 1 1 104.01 104.01 3 8.4832E-05 36677 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.616 61.207 13.812 6.9437 37.683 17.56 19.874 22.386 13 7 36 17 19 21 2 1 3 2 1 2 3136.8 11737 1558 11300 27446;27447;27448 31864;31865;31866 31865 3 LDILDVLSEIK Unmodified 1256.7228 0.72276909 1144 J3QN31;P28650 Adssl1 Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 0 9 0 1 104.7 104.7 3 0.017358 36792 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.829 12.771 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1588.2 11738 1144 11301 27449 31867 31867 1 LDINLLDNVVNCLYHGEGAQQR Unmodified 2540.2442 0.24416981 2222 Q6P5F9;A2AKT6 Xpo1 Exportin-1 yes no 0 0 0 0 9 0 1 92.994 92.994 3 3.5383E-06 33096 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.444 36.514 0 0 0 20.417 18.625 9.0625 0 0 0 19 19 9 0 0 0 1 1 1 1786 11739 2222 11302 27450 31868 31868 1 LDISDEFSEVIK Unmodified 1393.6977 0.69767655 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 7 3.54 1 1 1 1 82.773 82.773 2;3 5.3293E-06 32103 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.353 67.126 79.96 94.354 92.284 75.834 93.349 77.817 75 92 93 75 93 74 2 2 2 2 2 2 18750 11740 3271;3353 11303 27451;27452;27453;27454 31869;31870;31871;31872 31872 4 LDITTLTGVPEEHIK Unmodified 1664.8985 0.89850163 976 Q9CXZ1;E9QPX3;A0A338P7A0 Ndufs4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 0 8 2.92 2 1 1 71.085 71.085 3;4 2.4216E-07 25300 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.35 77.344 242.27 102.81 217.17 138.07 418.39 333.45 227 102 213 139 417 324 3 2 3 2 4 4 47044 11741 976 11304 27455;27456;27457;27458 31873;31874;31875;31876 31873 4 LDKDNLSYIEHIFEISR Unmodified 2091.0637 0.063669474 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 1 9.33 2.62 1 1 1 83.255 83.255 4 2.3116E-06 29710 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.514 61.572 168.3 121.97 216.35 229.97 211.91 249.79 158 121 213 222 214 240 3 2 3 3 3 4 42764 11742 2143 11305 27459;27460;27461 31877;31878;31879;31880 31879 4 LDKGQIQEIVLVGGSTR Unmodified 1812.0105 0.010511692 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 1 9 1 1 1 69.662 69.662 3 6.8824E-06 23259 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.155 46.021 48.642 104.02 73.601 104.93 115.42 184.32 46 102 74 102 121 176 1 2 1 2 2 2 11744 11743 1397 11306 27462;27463 31881;31882 31881 2 LDKSQIHDIVLVGGSTR Unmodified 1837.0058 0.005760665 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 9.5 1.12 1 1 1 1 60.498 60.498 4 1.9064E-06 18954 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.021 65.736 340.1 494.61 673.63 349.96 431.31 665.67 321 497 666 354 446 636 2 4 4 2 3 4 84856 11744 1762 11307 27464;27465;27466;27467 31883;31884;31885;31886 31883 4 LDLDFPNLPYLMDGK Unmodified 1749.8648 0.86475866 1584 P48774;E9PVM7 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 8 1 1 1 97.232 97.232 3 0.0011802 34781 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.168 26.199 0 9.252 19.38 13.982 27.772 0 0 9 19 14 28 0 0 1 1 1 2 0 1883.4 11745 1584 11308 27468;27469 31887;31888 31888 2 LDLDLPVQHYVPEFPEKEYEGEK Unmodified 2773.3487 0.34867769 3161 Q9EP89;A0A1L1SVF9 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial yes no 0 0 0 1 6 0 1 77.167 77.167 4 0.00030856 28208 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.395 33.43 20.081 27.975 27.665 19.118 0 29.848 19 28 28 19 0 28 1 1 1 1 0 1 1875.1 11746 3161 11309 27470 31889 31889 1 LDLDLTSDSQPPVFK Unmodified 1673.8512 0.85121708 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 13 0 1 80.305 80.305 3 0.0045786 31030 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.873 14.645 98.944 70.691 82.119 66.151 0 0 93 74 83 65 0 0 1 1 1 1 0 0 5886.2 11747 2151 11310 27471 31890 31890 1 LDLDNSGSLSVEEFMSLPELQQNPLVQR Unmodified 3157.5601 0.5601438 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 9.75 3.27 1 1 2 101.05 101.05 3;4 1.1242E-08 37330 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.172 52.896 0 9 0 0 2 9 0 9 0 0 2 9 0 1 0 0 1 1 11706 11748 2164 11311 27472;27473;27474;27475 31891;31892;31893;31894 31891 4 LDLEGVVFPYHPR Unmodified 1540.8038 0.80381338 2329 Q80WM4 Hapln4 Hyaluronan and proteoglycan link protein 4 yes yes 0 0 0 0 8 0 1 74.23 74.23 3 0.0318 25222 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.799 22.225 29.68 17.438 46.46 47.509 0 69.29 28 19 46 46 0 65 1 1 1 1 0 1 4415.5 11749 2329 11312 27476 31895 31895 1 LDLFANVVHVK Unmodified 1253.7132 0.71320746 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 11.3 1.25 1 1 1 76.505 76.505 3 0.00019858 22906 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.548 53.153 179.19 58.839 44.559 158.25 103.97 108.73 167 56 46 149 102 102 2 1 1 3 1 1 32734 11750 2734 11313 27477;27478;27479 31896;31897;31898 31897 3 LDLGNNEFSELPEVLDQIQNLR Unmodified 2555.2867 0.28674613 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 6 0 1 101.69 101.69 3 7.2198E-07 37455 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.814 42.934 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1832.8 11751 82 11314 27480 31899 31899 1 LDLIAQQMMPEVR Unmodified 1542.7898 0.78981957 1597 P50518 Atp6v1e1 V-type proton ATPase subunit E 1 yes yes 0 0 0 0 10 2.16 1 1 1 84.661 84.661 3 4.7688E-14 33056 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.54 98.483 60.088 0 0 51.371 0 50.102 56 0 0 47 0 47 2 0 0 2 0 2 33244 11752 1597 11315 27481;27482;27483 31900;31901;31902 31902 3 LDLLEDR Unmodified 872.46035 0.46034682 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 5 0 1 66.135 66.135 2 0.037575 23472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.229 15.472 0 29.792 0 30.604 0 29.848 0 28 0 28 0 28 0 1 0 1 0 1 6089.5 11753 2408 11316 27484 31903 31903 1 LDLMDAGTDAMDVLMGR Unmodified 1822.8263 0.82634102 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 9.5 3.5 1 1 102.19 102.19 3 2.5855E-06 41471 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.376 62.543 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 3115.6 11754 815;2590 11317 27485;27486 31904;31905 31905 2 LDLMDEGTDAR Unmodified 1234.55 0.54996646 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm3;Dnm2 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 0 5.67 3.45 2 1 1 1 1 61.363 61.363 2;3 7.0596E-13 21805 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 145.89 105.87 564.91 255.37 209.69 522.94 712.98 508.75 528 251 205 500 720 492 6 4 4 6 7 5 126760 11755 118;1534;960;1082 11318 27487;27488;27489;27490;27491;27492 31906;31907;31908;31909;31910;31911;31912;31913 31906 8 LDLMDEGTDARDVLENK Unmodified 1932.9099 0.90987095 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm3;Dnm2 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 1 7.33 4.03 1 1 1 72.66 72.66 3;4 0.0019765 26596 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.827 24.391 118.22 37.355 117.24 74.987 48.184 156.39 111 37 111 75 47 148 2 1 1 2 1 3 19564 11756 118;1534;960;1082 11319 27493;27494;27495 31914;31915;31916 31915 3 LDLPPGFMFK Unmodified 1163.6049 0.60490256 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 11.2 1.6 1 1 1 2 85.289 85.289 2;3 5.9204E-05 27413 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.98 42.907 78.597 65.92 166.25 77.41 180.03 58.629 74 65 162 74 175 56 2 1 4 2 4 2 21496 11757 1157;2210 11320 27496;27497;27498;27499;27500 31917;31918;31919;31920;31921;31922;31923 31920 7 LDLSNVQSK Unmodified 1002.5346 0.53457439 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 8.67 0.471 1 2 57.109 57.109 2;3 0.00057335 17199 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.26 61.285 59.711 160.3 221.4 214.15 0 138.58 56 157 214 208 0 130 1 2 2 3 0 2 20559 11758 572;46 11321 27501;27502;27503 31924;31925;31926 31924 3 LDLTGSGGTAVPAR Unmodified 1313.6939 0.69392858 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 55.373 55.373 2 6.4974E-07 17061 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.64 58.962 295.72 352.44 192.01 160.16 170.09 400.79 278 353 195 157 168 380 3 5 2 2 3 4 52033 11759 2585 11322 27504;27505;27506;27507;27508 31927;31928;31929;31930;31931 31928 5 LDMYVLNPVK Unmodified 1190.6369 0.63693097 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 9.5 2.06 2 1 1 76.919 76.919 2;3 0.00050237 25847 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.377 61.949 178.61 161.64 0 79.735 145.17 173.88 167 166 0 74 148 167 3 4 0 1 3 3 27646 11760 510 11323 27509;27510;27511;27512 31932;31933;31934;31935 31934 4 LDMYVLNPVKDSK Unmodified 1520.7909 0.79086543 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 9 0 1 70.725 70.725 3 0.02033 23024 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.704 34.272 59.443 64.251 53.909 56.765 65.382 0 56 65 56 56 65 0 1 1 1 1 1 0 3708.2 11761 510 11324 27513 31936 31936 1 LDNLMLELDGTENK Unmodified 1603.7763 0.77633758 1399 P17183;D3Z6E4;D3Z2S4;D3YVD3 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 7.6 2.87 1 2 1 1 82.865 82.865 2;3 9.8631E-22 31767 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.46 105.82 103.51 70.841 92.05 80.162 120.01 141.55 97 73 89 75 120 136 3 3 3 2 3 4 37306 11762 1399 11325 27514;27515;27516;27517;27518 31937;31938;31939;31940;31941 31937 5 LDNLVAIFDINR Unmodified 1401.7616 0.76161421 1537 P40142 Tkt Transketolase yes yes 0 0 0 0 11 1.29 1 1 2 1 1 94.828 94.828 2;3 1.9517E-14 37893 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.27 87.294 99.43 88.104 92.525 105.4 152.16 119.58 93 83 87 98 150 116 2 3 3 3 5 3 85709 11763 1537 11326 27519;27520;27521;27522;27523;27524 31942;31943;31944;31945;31946;31947;31948;31949 31949 8 LDNVMLDAEGHIK Unmodified 1453.7235 0.72351415 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 5.5 0.5 1 1 66.636 66.636 3 0.00010891 23039 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.566 55.503 0 77.475 153.49 44.758 129.56 96.755 0 74 148 46 129 93 0 1 2 1 2 1 15939 11764 1783 11327 27525;27526 31950;31951 31951 2 LDNVSHTPSSYIETLPK Unmodified 1899.9578 0.95780742 637 B7ZNL2;Q78ZA7;A0A140LJ37 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 0 6 0 1 63.187 63.187 4 2.2734E-06 21610 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.463 55.036 49.014 0 57.817 56.74 54.339 47.485 46 0 56 56 56 46 1 0 1 1 1 1 5415.2 11765 637 11328 27527 31952 31952 1 LDNWLNELETYCTR Unmodified 1825.8305 0.83049842 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 10 3 1 1 89.457 89.457 3 0.014215 35266 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.095 23.73 9.657 0 0 0 19.197 19.706 9 0 0 0 19 19 1 0 0 0 1 1 1472.2 11766 1518 11329 27528;27529 31953;31954 31954 2 LDNYDAPDIANIAISNELFEEAFAIFR Unmodified 3070.4924 0.49238181 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 13 0 2 120.78 120.78 3;4 1.0524E-25 45382 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.97 102.52 4.272 9.1665 7.2621 0 4.184 0 4 9 7 0 4 0 1 2 1 0 1 0 6865 11767 2185 11330 27530;27531 31955;31956 31956 2 LDPAALAAQLVPAPAAAPR Unmodified 1812.0258 0.025767826 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 10.4 1.73 1 2 2 1 2 86.904 86.904 3;4 1.0737E-19 30572 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 129.36 113.82 189.15 153.07 78.027 79.983 179.48 194.52 177 149 75 74 177 186 6 4 3 3 5 5 124120 11768 3268 11331 27532;27533;27534;27535;27536;27537;27538;27539 31957;31958;31959;31960;31961;31962;31963;31964;31965;31966;31967 31960 11 LDPALIRPGR Unmodified 1106.656 0.65602693 3007 Q9CZP5 Bcs1l Mitochondrial chaperone BCS1 yes yes 0 0 0 1 8 0 1 51.846 51.846 3 0.0010665 14742 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.08 55.213 0 87.603 42.389 47.752 0 0 0 83 46 46 0 0 0 1 1 1 0 0 3170.7 11769 3007 11332 27540 31968 31968 1 LDPAQSASR Unmodified 943.47231 0.47230849 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 36.583 36.583 2 0.019012 9448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.933 25.73 29.856 37.355 0 0 26.935 68.521 28 37 0 0 28 65 1 1 0 0 1 1 5204.9 11770 551 11333 27541 31969 31969 1 LDPETLGSLGLIK Unmodified 1354.7708 0.77078192 913 E9Q5E2 BC005561 yes yes 0 0 0 0 9 0 1 71.399 71.399 3 0.010186 23349 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.257 7.8314 156.84 143.41 208.63 182.12 0 200.41 148 148 209 178 0 188 1 1 1 1 0 1 9823.4 11771 913 11334 27542 31970 31970 1 LDPFQELVLESNSVDELR Unmodified 2102.0532 0.053164368 311 A0A1L1SV73;Q8BY87 Usp47 Ubiquitin carboxyl-terminal hydrolase 47 yes no 0 0 0 0 5 0 1 92.902 92.902 3 0.001518 34927 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.372 31.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11772 311 11335 27543 31971 31971 1 LDPGSEETQTLVR Unmodified 1443.7205 0.72053726 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 3.5 0.5 1 1 54.957 54.957 2 0.00061065 18944 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.962 15.697 20.292 28.118 18.27 76.709 25.514 87.75 19 28 19 74 28 83 1 2 1 3 1 2 7667.1 11773 3094 11336 27544;27545 31972;31973;31974 31972 3 LDPGSPELQQVLK Unmodified 1422.7718 0.77184455 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 1 70.781 70.781 2 0.0012152 25192 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.721 34.179 39.701 0 0 29.902 37.328 0 37 0 0 28 37 0 1 0 0 1 1 0 1980.9 11774 1412 11337 27546 31975 31975 1 LDPHLVLDQLR Unmodified 1317.7405 0.74048484 1974;2696 Q8VDD5;Q3UH59;Q61879;Q5SV64 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 7.5 0.5 1 1 71.775 71.775 3 0.00057113 24634 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.819 43.499 49.176 36.052 38.365 77.225 72.867 28.824 46 37 37 74 74 28 1 1 1 2 2 1 44904 11775 2696;1974 11338 27547;27548 31976;31977 31976 2 LDPINTTLLK Unmodified 1126.6598 0.6597749 2687 Q9QYF9;Q8VCV2 Ndrg3 Protein NDRG3 yes no 0 0 0 0 8.5 0.5 1 1 72.781 72.781 2 0.00014867 24599 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.88 38.916 78.764 250.41 466.84 201.24 402.12 143.9 74 241 454 204 398 139 1 2 3 2 3 1 23060 11776 2687 11339 27549;27550 31978;31979;31980 31978 3 LDPPPFSLIVETR Unmodified 1482.8082 0.80823006 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 7 0 1 83.837 83.837 2 0.049743 30588 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.653 12.761 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 4377.7 11777 927 11340 27551 31981 31981 1 LDPQNHVLYSNR Unmodified 1454.7266 0.72662569 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 6 0 1 45.107 45.107 3 4.6487E-09 13056 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.93 82.204 39.079 55.995 57.035 0 77.404 0 37 56 56 0 74 0 1 1 1 0 1 0 10794 11778 2092 11341 27552 31982 31982 1 LDPRPEYHR Unmodified 1181.5942 0.59415496 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 1 6 0 1 33.646 33.646 4 0.01647 7609 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.112 44.238 0 0 59.435 25.982 57.382 0 0 0 56 28 56 0 0 0 1 1 1 0 2118.1 11779 416 11342 27553 31983 31983 1 LDPSIFESLQK Unmodified 1275.6711 0.67106787 1665 P60122;D3YW60 Ruvbl1 RuvB-like 1 yes no 0 0 0 0 13 0 1 81.799 81.799 3 0.024023 31732 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.592 3.8488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11780 1665 11343 27554 31984 31984 1 LDPTGCLTSLVLVASGR Unmodified 1757.9346 0.93456956 862 E9PZ88;F8WIE1;Q91W89;E9PYM7 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 0 11 0 1 92.655 92.655 3 1.849E-06 29742 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.346 61.25 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 5195.6 11781 862 11344 27555 31985 31985 1 LDPTQTSFLK Unmodified 1148.6077 0.60773933 3277;377 Q9QYG0;A0A2I3BPW0 Ndrg2 Protein NDRG2 no no 0 0 0 0 10.2 2.19 1 2 1 2 67.801 67.801 2;3 2.2704E-05 23107 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.22 58.911 295.52 386.76 509.14 255.58 723.3 313.32 278 389 500 259 713 306 3 4 4 3 5 3 119780 11782 3277;377 11345 27556;27557;27558;27559;27560;27561 31986;31987;31988;31989;31990;31991 31986 6 LDPTTTTFLK Unmodified 1135.6125 0.61249036 2454 Q8BTG7 Ndrg4 Protein NDRG4 yes yes 0 0 0 0 9.5 2.06 2 1 1 69.235 69.235 2;3 0.00043367 25591 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.898 44.155 148.65 124.28 45.197 203.13 330.71 241.13 139 120 46 194 333 232 2 2 1 4 4 3 43048 11783 2454 11346 27562;27563;27564;27565 31992;31993;31994;31995 31995 4 LDPVSLQILQTWNTSYPK Unmodified 2102.1048 0.10480601 1287 Q8R357;O88998;A3KGE4;G3X9Q7 Olfm1 Noelin yes no 0 0 0 0 10 0 1 93.99 93.99 3 0.0015167 30645 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.376 39.667 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11784 1287 11347 27566 31996 31996 1 LDQEAENLVATVVPTHLAAAVPEVAVYLK Unmodified 3059.6543 0.65430218 1654 P58389 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 0 7 1 1 1 101.46 101.46 4 1.8172E-12 37426 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.901 51.705 20.129 18.394 27.801 37.947 0 20.254 19 19 28 37 0 19 1 1 1 2 0 1 3333.1 11785 1654 11348 27567;27568 31997;31998 31997 2 LDQEDALLGSYPVDDGCR Unmodified 2021.9 0.90003454 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 4 0 1 71.468 71.468 3 0.00011935 26007 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.553 42.497 29.514 36.404 58.259 0 57.607 28.204 28 37 56 0 56 28 1 1 1 0 1 1 4814.7 11786 3039 11349 27569 31999 31999 1 LDQEEMVDKPDIGSYER Unmodified 2022.9204 0.92043564 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 4 0 1 61.091 61.091 3 0.015299 21465 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.422 24.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11787 570 11350 27570 32000 32000 1 LDQLFEMADQYQYQVVLVEPK Unmodified 2555.2618 0.26177693 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8.71 1.91 2 2 2 1 103.14 103.14 3;4 8.5684E-08 37041 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.88 54.267 80.093 107.54 33.246 72.651 61.076 48.124 75 106 32 69 60 46 4 6 2 5 3 3 22303 11788 1390 11351 27571;27572;27573;27574;27575;27576;27577 32001;32002;32003;32004;32005;32006;32007;32008;32009;32010 32001 10 LDQLIYIPLPDEK Unmodified 1555.8498 0.84976052 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 8.43 2.06 1 1 3 1 1 91.198 91.198 2;3;4 4.7945E-14 32307 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.97 74.081 29.952 47.988 15.148 219.32 177.63 58.072 28 47 14 205 178 55 1 2 1 3 2 2 42465 11789 1875 11352 27578;27579;27580;27581;27582;27583;27584 32011;32012;32013;32014;32015;32016;32017 32016 7 LDQLQFDVR Unmodified 1132.5877 0.58767259 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 7 0 1 68.27 68.27 2 0.023865 23121 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.593 23.433 69.084 43.037 74.695 54.834 102.22 56.779 65 46 74 56 102 56 1 1 1 1 1 1 4373.2 11790 1081 11353 27585 32018 32018 1 LDQLTANSAR Unmodified 1087.5622 0.56218613 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 7.5 0.5 1 1 49.74 49.74 2 6.0864E-05 13688 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.1 51.295 186.49 200.71 225.38 65.694 241.84 210.56 176 204 223 65 241 204 2 2 2 1 2 2 46408 11791 1304 11354 27586;27587 32019;32020 32020 2 LDQPDWTGR Unmodified 1086.5094 0.50942227 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 9 4 1 1 53.923 53.923 2 3.3803E-08 17968 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 165.15 118.34 236.26 257.83 108.72 233.04 166.06 271.36 222 259 111 222 170 259 2 2 1 2 1 2 36725 11792 2960 11355 27588;27589 32021;32022 32021 2 LDQPMTEIVSR Unmodified 1287.6493 0.64928657 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 5.5 0.5 1 1 61.701 61.701 2 2.5187E-05 21527 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.21 42.385 118.27 110.42 46.174 50.278 27.631 127.13 111 112 46 46 28 120 2 2 1 1 1 2 18795 11793 1876 11356 27590;27591 32023;32024 32023 2 LDQVEQELNELR Deamidation (N) 1485.7311 0.73110195 2973 Q9CW03 Smc3 Structural maintenance of chromosomes protein 3 yes yes 0 1 0 0 4 0 1 80.751 80.751 3 0.0079193 30291 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.7 19.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6613.1 11794 2973 11357 27592 32025 32025 1034 1 LDQWLTTMLLR Unmodified 1388.7486 0.74860669 1478;3106 Q9DB05;P28663 Napa;Napb Alpha-soluble NSF attachment protein;Beta-soluble NSF attachment protein no no 0 0 0 0 8.71 4.92 2 2 2 1 101.02 101.02 2;3 6.2069E-16 28589 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 162.21 112.49 96.12 149.62 88.022 198.88 146.52 113.48 90 148 88 189 149 109 3 6 4 5 3 3 150720 11795 3106;1478 11358 27593;27594;27595;27596;27597;27598;27599 32026;32027;32028;32029;32030;32031;32032;32033;32034 32033 9 LDRLEETVQAK Unmodified 1300.6987 0.69867961 1289 O89053;G3UYK8 Coro1a Coronin-1A;Coronin yes no 0 0 0 1 8.67 3.09 1 1 1 58.699 58.699 3 5.8494E-08 19580 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.02 75.919 348.45 356.98 371.07 583.47 519.53 721.78 326 352 378 563 546 691 2 2 2 3 3 3 65323 11796 1289 11359 27600;27601;27602 32035;32036;32037 32035 3 LDSGQLGLYPANYVEAI Unmodified 1821.9149 0.91487997 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 7.43 2.44 1 2 2 1 1 94.759 94.759 2;3 3.5109E-05 35792 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.18 65.307 36.318 34.466 34.467 51.266 80.119 38.213 34 33 34 48 80 36 4 2 3 4 5 3 104560 11797 2133 11360 27603;27604;27605;27606;27607;27608;27609 32038;32039;32040;32041;32042;32043;32044;32045;32046 32042 9 LDSQSLYCISADGSQLPLFR Unmodified 2269.1049 0.10488236 61 A0A0A6YWL7;A0A0A6YWF9;Q6VNS1 Ntrk3 Tyrosine-protein kinase receptor;NT-3 growth factor receptor yes no 0 0 0 0 10.5 2.5 1 1 87.324 87.324 3 0.00047676 34344 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.808 38.644 0 29.792 0 70.181 45.938 0 0 28 0 65 47 0 0 1 0 2 2 0 3268.6 11798 61 11361 27610;27611 32047;32048 32048 2 LDSSVVPNTVTEFAITR Unmodified 1847.9629 0.9628928 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 78.447 78.447 2;3 1.4071E-08 27845 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.56 82.589 219.56 0 108.69 126.51 260.51 203.74 205 0 102 121 260 194 5 0 3 3 5 4 75211 11799 2479 11362 27612;27613;27614;27615;27616 32049;32050;32051;32052;32053;32054 32051 6 LDSTDIYNELK Unmodified 1309.6402 0.64016167 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 5 0 1 71.88 71.88 3 0.0019649 26237 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.434 38.561 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 3328.2 11800 2178 11363 27617 32055 32055 1 LDSTDTNFDTWIK Unmodified 1554.7202 0.72020291 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 10 3 1 1 77.881 77.881 3 0.00011379 27658 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.589 53.357 58.846 102.52 121.78 36.156 92.669 85.834 56 102 120 37 93 83 2 2 2 1 2 2 9759.1 11801 2983 11364 27618;27619 32056;32057 32056 2 LDTDDLDEIEK Unmodified 1304.5984 0.59835644 2134;2481 Q61655;Q8R3C7;Q8BZY3 Ddx19a;Ddx19b ATP-dependent RNA helicase DDX19A no no 0 0 0 0 3.5 0.5 1 1 67.648 67.648 2;3 0.00021124 24287 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.198 41.333 9.4074 28.865 17.484 29.055 26.955 29.079 9 28 19 28 28 28 1 1 1 1 1 1 4333.9 11802 2134;2481 11365 27620;27621 32058;32059 32059 2 LDTLCDLYETLTITQAVIFLNTR Unmodified 2712.4044 0.40441843 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 11.5 0.5 1 1 127.22 127.22 3 0.0040811 40677 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.458 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3352.4 11803 1345 11366 27622;27623 32060;32061 32060 2 LDTNTSTYLMSLLANDTLNIVASDHRPFTTK Unmodified 3451.7293 0.72933439 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 1 10 0.707 1 2 1 97.359 97.359 4;5 3.3924E-13 31837 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.879 55.624 0 14.896 0 15.302 37 0 0 14 0 14 37 0 0 1 0 1 2 0 6350.2 11804 3172 11367 27624;27625;27626;27627 32062;32063;32064;32065 32064 4 LDTTHLLAK Unmodified 1010.576 0.57604528 2051 Q5M8N4;A0A2I3BQS7;A0A2I3BRL7;A0A2I3BPM4 Sdr39u1 Epimerase family protein SDR39U1 yes no 0 0 0 0 8.5 0.5 1 1 57.915 57.915 3 0.0012636 16878 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.239 52.497 0 87.43 52.76 169.55 0 296.35 0 83 56 158 0 278 0 1 1 2 0 2 10047 11805 2051 11368 27628;27629 32066;32067 32067 2 LDTYEALTQK Unmodified 1180.5976 0.59756858 2153 Q62351 Tfrc Transferrin receptor protein 1 yes yes 0 0 0 0 6 0 1 65.763 65.763 3 0.0079847 22744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.359 27.272 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11806 2153 11369 27630 32068 32068 1 LDVATDNFFQNPELYIR Unmodified 2054.0109 0.010905622 105 A0A140T8R8;A0A0G2JGV7;Q3UT23;A0A1Y7VP24;Q9QZ73;A0A0G2JEA2;A0A0G2JDN9;A0A1B0GXL7;A0A0G2JDM0 Dcun1d1 DCN1-like protein;DCN1-like protein 1 yes no 0 0 0 0 6.5 0.5 1 1 88.964 88.964 3 2.497E-06 32853 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.548 57.184 29.744 19.35 34 8.8699 17.916 14.681 28 19 33 9 18 14 2 1 2 1 2 1 3441 11807 105 11370 27631;27632 32069;32070 32070 2 LDVLESLLNSQK Unmodified 1357.7453 0.74529545 2787 S4R1P5;Q91ZU6;E9Q9X1;A0A087WSP0 Dst Dystonin yes no 0 0 0 0 9.5 0.5 1 1 96.446 96.446 3 0.00018171 31559 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.692 50.365 9.4617 38.73 0 20.767 0 0 9 37 0 19 0 0 1 1 0 1 0 0 911.77 11808 2787 11371 27633;27634 32071;32072 32072 2 LDVLINNAGVFHCPYTK Unmodified 1959.9877 0.98766776 3185 Q9ERI6 Rdh14 Retinol dehydrogenase 14 yes yes 0 0 0 0 10 0 2 78.672 78.672 3;4 1.8735E-05 24427 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.449 47.342 29.692 27.186 36.139 47.45 35.862 19.231 28 28 37 46 37 19 1 1 1 1 1 1 3278.4 11809 3185 11372 27635;27636 32073;32074 32074 2 LDVPQNLMFGK Unmodified 1260.6536 0.65364367 897 E9Q4G8;E9Q3Q6;Q61490;Q5MPX5 Alcam CD166 antigen yes no 0 0 0 0 11 2 1 1 77.742 77.742 3 0.00048915 29714 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.693 57.16 98.95 80.421 72.885 66.029 35.751 48.016 93 83 75 65 37 46 2 2 2 2 1 1 7858 11810 897 11373 27637;27638 32075;32076 32076 2 LDWSHNFTNMLGYTDPQFTELMR Unmodified 2815.2734 0.27342103 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 0 10 2.16 1 1 1 92.67 92.67 3 6.9015E-16 33675 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.396 78.297 38.928 0 19.534 19.603 0 0 37 0 19 19 0 0 2 0 1 1 0 0 13855 11811 3011 11374 27639;27640;27641 32077;32078;32079 32077 3 LDWTSLLPSSIK Unmodified 1358.7446 0.74456717 2427 Q8BLF1 Nceh1 Neutral cholesterol ester hydrolase 1 yes yes 0 0 0 0 11 1 1 1 91.529 91.529 2;3 6.375E-05 26059 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.001 48.98 20.091 19.758 77.083 38.112 36.951 0 19 19 74 37 37 0 1 1 2 1 1 0 3335.2 11812 2427 11375 27642;27643 32080;32081;32082 32082 3 LDYDEDASAMLR Unmodified 1397.6133 0.613295 2856 Q99L47;F8WJK8 St13 Hsc70-interacting protein yes no 0 0 0 0 4 0 1 65.66 65.66 2 1.133E-11 23407 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.36 87.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5097.6 11813 2856 11376 27644 32083 32083 1 LDYILGLK Unmodified 933.55352 0.55351892 2268 Q6ZWN5;F7CJS8;D3YWH9;Q9CXW7 Rps9 40S ribosomal protein S9 yes no 0 0 0 0 11.5 0.5 1 1 84.783 84.783 2 0.0036717 26557 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.99 61.201 0 39.368 0 86.441 0 0 0 37 0 83 0 0 0 1 0 2 0 0 7661.3 11814 2268 11377 27645;27646 32084;32085 32084 2 LEAAAQVR Unmodified 856.47667 0.47666558 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F6V7K3;F2Z3V5 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 5.5 0.5 1 1 42.064 42.064 2 0.013985 11661 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.809 21.564 88.006 101.07 91.272 63.899 90.697 106.14 83 102 93 65 93 102 1 1 1 1 1 1 11894 11815 1899 11378 27647;27648 32086;32087 32087 2 LEAADEGSGDVK Unmodified 1189.5463 0.54626129 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 3.5 0.5 1 1 47.757 47.757 3 1.1426E-06 15583 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.17 75.872 188.37 26.184 57.613 27.17 77.404 59.696 176 28 56 28 74 56 2 1 1 1 1 1 19799 11816 628 11379 27649;27650 32088;32089 32088 2 LEAAEER Unmodified 816.39775 0.39774656 1619;1629 P54227;D3Z5N2;D3Z1Z8;Q05DI3;D3Z4C2;G3X9Z6;P63042;O70166;P55821 Stmn1;Stmn4;Stmn3;Stmn2 Stathmin;Stathmin-4;Stathmin-3;Stathmin-2 no no 0 0 0 0 3 0.816 1 1 1 35.857 35.857 2 0.010994 10066 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.92 17.015 386.77 174.58 130.84 383.67 455.9 283.34 362 185 139 366 462 278 3 2 1 3 3 3 67043 11817 1619;1629 11380 27651;27652;27653 32090;32091;32092 32091 3 LEAALGEAK Unmodified 900.49165 0.49164694 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 6.5 0.5 1 1 58.626 58.626 3 0.0021817 19415 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.985 31.876 39.701 0 0 40.441 56.948 47.411 37 0 0 37 56 46 1 0 0 1 1 1 6364.6 11818 1580 11381 27654;27655 32093;32094 32093 2 LEAAVAQSEQQGEAALSDAR Unmodified 2042.9869 0.98687572 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385 yes no 0 0 0 0 6.67 4.5 1 1 1 68.897 68.897 3 1.3836E-22 24820 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 129.32 110.54 119.2 81.772 95.27 41.037 26.404 177.27 112 84 93 38 28 167 3 2 2 1 1 3 61083 + 11819 648 11382 27656;27657;27658 32095;32096;32097 32096 3 LEAEAVPEVSEK Unmodified 1299.6558 0.65581174 259 A0A1B0GS58;Q9CQM9;A0A1B0GT04 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 4 0.816 1 1 1 58.959 58.959 2;3 1.8459E-07 20516 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.18 56.084 19.917 37.232 47.438 0 57.937 18.601 19 37 46 0 56 19 1 1 1 0 1 1 10469 11820 259 11383 27659;27660;27661 32098;32099;32100 32099 3 LEAELAAHEPAIQGVLDTGK Unmodified 2061.0742 0.074234161 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 74.048 74.048 3 9.2121E-06 27271 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.798 44.95 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 4142.1 11821 551 11384 27662 32101 32101 1 LEAELAAHEPAIQGVLDTGKK Unmodified 2189.1692 0.16919718 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6 0 2 69.75 69.75 4;5 5.0063E-08 24625 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.747 55.493 89.256 73.321 85.108 49.77 27.002 88.478 84 74 83 46 28 83 2 1 1 1 1 1 13237 11822 551 11385 27663;27664 32102;32103 32102 2 LEAENNLAAYR Unmodified 1262.6255 0.62551466 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 7 3.54 1 1 1 1 53.222 53.222 2;3 4.4295E-16 17588 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.64 131 276.21 87.222 211.55 62.883 355.71 279.3 259 93 204 65 352 269 3 1 2 1 4 3 80640 11823 1304 11386 27665;27666;27667;27668 32104;32105;32106;32107 32107 4 LEAENNLAAYR Deamidation (N) 1263.6095 0.60953025 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 1 0 0 4 0 1 56.011 56.011 2 0.014123 19157 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.05 55.864 0 77.618 66.849 86.778 55.813 59.696 0 74 65 84 56 56 0 2 1 2 1 1 4657.2 11824 1304 11386 27669 32108;32109 32109 360 2 LEAFLTQK Unmodified 948.52803 0.52803245 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 0 10.2 1.47 2 2 1 71.588 71.588 2;3 0.0031538 23373 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.452 25.172 1044.9 432.48 396.28 850.19 207.11 970.06 978 434 380 788 198 910 5 2 3 4 1 3 134840 11825 1500 11387 27670;27671;27672;27673;27674 32110;32111;32112;32113;32114 32110 5 LEAIEDDSGR Unmodified 1103.5095 0.50948185 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 2.5 0.5 1 1 51.224 51.224 2 0.00081455 17179 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.297 25.562 70.397 179.24 54.537 127.27 92.3 28.811 66 176 56 121 93 28 2 4 1 3 2 1 7632.4 11826 853 11388 27675;27676 32115;32116;32117;32118 32117 4 LEAIEDDSGRETDSSSAPAVTPSK Unmodified 2461.1456 0.14562078 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 1 3.5 0.5 1 1 56.317 56.317 4;5 0.0053236 19280 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.9 22.439 49.179 0 30.048 0 19.874 0 46 0 28 0 19 0 1 0 1 0 1 0 8586.8 11827 853 11389 27677;27678 32119;32120 32120 2 LEALAEER Unmodified 929.48181 0.48181054 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 13 0 1 52.496 52.496 2 0.026664 17514 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.301 15.697 176.57 230.84 245.32 185.82 209.89 279.7 167 232 248 187 218 268 1 1 1 1 1 1 17271 11828 2186 11390 27679 32121 32121 1 LEALDANSR Deamidation (N) 988.48254 0.48253882 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 1 0 0 4.5 0.5 1 1 51.961 51.961 2 0.0069636 16925 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.16 40.663 147.49 202.76 260.19 184.62 110.62 244.16 139 204 260 185 111 232 1 2 2 2 1 2 21153 11829 599;600 11391 27680;27681 32122;32123 32123 171 2 LEALDANSR Unmodified 987.49852 0.49852324 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 6 0 1 49.34 49.34 2 0.0009881 14952 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.3 49.877 87.994 80.528 110.68 93.03 107.54 124.85 83 83 111 93 111 120 1 1 1 1 1 1 47921 11830 599;600 11391 27682 32124 32124 1 LEALELK Unmodified 814.48002 0.48001963 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 0 10 3 1 1 67.533 67.533 2 0.055021 22990 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.213 0 167.09 71.74 168.92 148.83 152.47 173.67 157 74 167 148 158 167 2 1 2 2 2 2 14806 11831 1176 11392 27683;27684 32125;32126 32125 2 LEALGTGWEELGR Unmodified 1429.7201 0.72014333 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.67 3.09 1 1 1 77.366 77.366 2;3 1.5412E-18 29372 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.83 99.528 79.08 63.828 0 131.37 46.751 88.478 74 65 0 121 46 83 1 1 0 2 1 1 15014 11832 2186 11393 27685;27686;27687 32127;32128;32129 32129 3 LEAPDADELPR Unmodified 1224.5986 0.59863121 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 3 0.816 1 1 1 57.306 57.306 2;3 5.0195E-20 20061 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 172.98 121.25 108.72 53 220.52 172.76 62.853 167.15 102 56 213 167 65 158 2 1 3 3 2 2 72650 11833 2843 11394 27688;27689;27690 32130;32131;32132;32133 32132 4 LEAPLEELR Unmodified 1068.5815 0.58152458 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 4 0 1 65.373 65.373 2 0.00096772 23305 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.11 47.431 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 6492.2 11834 2418 11395 27691 32134 32134 1 LEASEEK Unmodified 804.38651 0.38651317 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3 0 1 41.65 41.65 3 0.054304 12666 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.743 7.6399 20.387 0 0 39.747 36.876 0 19 0 0 37 37 0 1 0 0 1 1 0 2685.6 11835 2105 11396 27692 32135 32135 1 LEASIER Unmodified 816.43413 0.43413207 137 A0A0N4SVT3;A0A0N4SW28;Q9DAS9 Gng12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes no 0 0 0 0 4.5 0.5 1 1 44.464 44.464 2 0.0055212 13607 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.79 30.774 168.65 175.89 130 127.35 202.74 230.87 158 176 130 120 207 222 1 1 1 1 1 1 58376 11836 137 11397 27693;27694 32136;32137 32136 2 LEASITEYA Unmodified 995.48114 0.48114184 1346 P10639 Txn Thioredoxin yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 72.184 72.184 2 2.9479E-05 26489 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.46 107.58 50.129 96.096 137.48 105.68 233.28 192.71 47 93 139 102 232 186 3 3 5 3 5 5 80813 11837 1346 11398 27695;27696;27697;27698;27699 32138;32139;32140;32141;32142;32143;32144 32140 7 LECEINTYR Unmodified 1196.5496 0.54957253 664;649;663 CON__Q9UE12;CON__Q15323;CON__REFSEQ:XP_986630;Q8K0Y2;Q61897;CON__Q497I4;Q497I4;E9PV64;CON__Q92764;Q6IFX3;CON__O76011;CON__Q8IUT8;CON__Q9D646;CON__A2A5Y0;Q9D646;Q61765;CON__Q14525 Krt33a;Krt33b;Krt35;Krt40;Krt34;Krt31 Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha5;Keratin, type I cytoskeletal 40;Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha1 no no 0 0 0 0 8.5 4.5 1 1 52.23 52.23 2 0.0094423 17468 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.1 41.847 39.522 29.792 30.097 0 29.288 148.17 37 28 28 0 28 139 1 1 1 0 1 1 13872 + 11838 664;649;663 11399 27700;27701 32145;32146 32145 2 LECSEELGDLVK Unmodified 1390.665 0.66499622 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 4.5 0.5 1 1 69.917 69.917 3 3.348E-08 25275 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.85 63.082 49.121 29.792 39.786 0 113.18 85.248 46 28 37 0 111 83 1 1 1 0 2 2 18846 11839 2185 11400 27702;27703 32147;32148 32148 2 LEDGTEFDSSLPQNQPFVFSLGTGQVIK Unmodified 3052.5029 0.5029465 1550 P45878 Fkbp2 Peptidyl-prolyl cis-trans isomerase FKBP2 yes yes 0 0 0 0 13 0 1 91.898 91.898 4 5.4365E-18 36587 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.935 66.501 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 4878.4 11840 1550 11401 27704 32149 32149 1 LEDLEVIQHR Unmodified 1250.6619 0.66190017 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0.816 1 1 1 57.642 57.642 3 0.00055691 19601 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.17 56.346 29.958 46.924 28 100.68 51.595 68.601 28 46 28 93 56 65 1 2 1 2 2 1 16711 11841 2148 11402 27705;27706;27707 32150;32151;32152 32151 3 LEDLEVVQQR Unmodified 1227.6459 0.64591575 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4 0 1 61.685 61.685 3 1.0689E-05 21750 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.46 78.932 20.387 0 0 0 18.867 29.31 19 0 0 0 19 28 1 0 0 0 1 1 3346.8 11842 2186 11403 27708 32153 32153 1 LEDLIVK Unmodified 828.49567 0.49566969 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 71.53 71.53 2 0.023689 26558 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.72 29.68 652.36 561.68 430.15 318.09 706.3 301.33 613 576 421 304 695 291 3 3 2 2 2 1 106740 11843 2622 11404 27709;27710;27711 32154;32155;32156 32156 3 LEDLVCDVVDR Unmodified 1331.6391 0.63911582 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4 0 1 80.495 80.495 2 0.0024505 30209 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.974 43.28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1155.6 11844 2441 11405 27712 32157 32157 1 LEDPDPGVQSAAVNVICELAR Unmodified 2252.1107 0.11069602 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 5 0 1 88.65 88.65 3 1.9888E-06 33850 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.278 45.023 5.3185 9.2174 0 0 9.414 0 5 9 0 0 9 0 1 1 0 0 1 0 1557.5 11845 1220 11406 27713 32158 32158 1 LEDSENHR Unmodified 998.44174 0.44173664 3191;192 A0A0R4J0X8;Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 no no 0 0 0 0 2 0.816 1 1 1 24.608 24.608 3 0.0011517 4776 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.39 52.966 95.074 56.275 38.811 58.051 44.886 106.39 92 56 37 56 46 101 2 1 1 2 1 2 10720 11846 192;3191 11407 27714;27715;27716 32159;32160;32161 32160 3 LEDTAFQVLLALPLSK Unmodified 1756.9975 0.99748739 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10 0.816 1 1 1 105.36 105.36 3 1.0322E-05 34737 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.786 56.648 25.584 31.596 9.0321 0 35.564 0 24 32 9 0 34 0 2 3 1 0 2 0 6680.4 11847 2235 11408 27717;27718;27719 32162;32163;32164;32165 32165 4 LEDTENWLYEDGEDQPK Unmodified 2079.8909 0.89090965 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 4.86 3.44 1 2 2 1 1 73.172 73.172 3;4 1.9775E-12 26786 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.46 102.16 144.91 225.08 166.56 222.11 196.14 194.4 136 220 162 209 199 186 5 8 6 7 6 6 74834 11848 1957 11409 27720;27721;27722;27723;27724;27725;27726 32166;32167;32168;32169;32170;32171;32172;32173;32174;32175;32176 32173 11 LEDVLPLAFTR Unmodified 1272.7078 0.70778773 1917 Z4YKA3;Z4YKB8;Q3TEA8;A2AM65 Hp1bp3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 9 0 1 86.393 86.393 2 0.00074702 30212 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.867 28.381 20.244 28.427 0 30.604 0 29.848 19 28 0 28 0 28 1 1 0 1 0 1 1404.4 11849 1917 11410 27727 32177 32177 1 LEEDLPQEPTSR Unmodified 1412.6783 0.6783381 3276 Q9QYC0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 0 3 0 1 53.188 53.188 3 0.031572 18037 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.113 19.45 19.986 47.139 27.367 0 0 0 19 46 28 0 0 0 1 1 1 0 0 0 3595 11850 3276 11411 27728 32178 32178 1 LEEEEDRGQQLQAER Unmodified 1828.8551 0.85513326 391 A0A2R8VHF9;E9QPE7;A0A338P6K2 Myh11 yes no 0 0 0 1 1 0 1 40.891 40.891 3 0.00094749 11521 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.215 40.894 20.244 28.427 0 0 19.874 0 19 28 0 0 19 0 1 1 0 0 1 0 2782.2 11851 391 11412 27729 32179 32179 1 LEEEGQSLK Unmodified 1031.5135 0.5135046 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 4 0 1 50.397 50.397 2 0.010442 16461 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.841 12.842 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 5401.9 11852 1304 11413 27730 32180 32180 1 LEEEGQSLKEEMAR Unmodified 1647.7774 0.77740021 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 6.25 3.96 1 1 1 1 59.474 59.474 3 6.3023E-35 20880 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 170.74 126.44 952.78 566.08 610.28 487.46 793.33 826.96 894 602 616 486 807 797 4 4 3 2 4 4 67617 11853 1304 11414 27731;27732;27733;27734 32181;32182;32183;32184 32182 4 LEEEIDSLAQELALK Unmodified 1699.888 0.88799652 474 A2AJ20;A2AJ23;Q64322 Npdc1 Neural proliferation differentiation and control protein 1 yes no 0 0 0 0 5 0 1 100.28 100.28 3 2.4076E-05 35995 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.54 67.853 0 3.125 4.0101 2.9278 5.9643 5.1598 0 3 4 3 6 5 0 1 1 1 1 1 522.48 11854 474 11415 27735 32185 32185 1 LEEELEAR Unmodified 987.48729 0.48728985 2067 Q5SWZ5 Mprip yes yes 0 0 0 0 2 0 1 52.073 52.073 2 0.039962 17142 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.038 24.051 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11855 2067 11416 27736 32186 32186 1 LEEESFR Unmodified 908.42396 0.42396131 2087 Q60790 Rasa3 Ras GTPase-activating protein 3 yes yes 0 0 0 0 3 0 1 47.239 47.239 2 0.026927 15368 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.046 40.931 49.137 0 37.187 58.345 34.371 48.055 46 0 37 56 37 46 1 0 1 1 1 1 3182 11856 2087 11417 27737 32187 32187 1 LEEETLNK Unmodified 974.49204 0.49204087 3426 yes yes 0 0 0 0 4.5 0.5 1 1 53.056 53.056 3 0.0058116 17729 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.547 0 39.29 26.361 83.753 27.818 0 69.29 37 28 83 28 0 65 1 1 2 1 0 1 3768.6 + 11857 3426 11418 27738;27739 32188;32189 32188 2 LEEGPPHTK Unmodified 1006.5084 0.50835964 2727;2019 Q91V14;A0A076FR46;Q6P6P5;Q3V0N8;Q924N4;A2AGJ9;F8WIJ0;Q9JIS8 Slc12a5;Slc12a6;Slc12a4 Solute carrier family 12 member 5;Solute carrier family 12 member 6;Solute carrier family 12 member 4 no no 0 0 0 0 4.5 0.5 1 1 38.266 38.266 3 0.0023963 10822 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.607 49.253 99.125 305.09 253.18 327.86 245.93 184.86 93 297 250 318 248 180 1 2 1 2 1 1 27090 11858 2727;2019 11419 27740;27741 32190;32191 32190 2 LEEGPPVTTVLTR Unmodified 1410.7718 0.77184455 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 7.25 3.34 2 1 1 64.395 64.395 2;3 2.6294E-40 22781 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 193.28 148.52 315.3 165.28 354.52 179.66 296.51 310.38 296 168 343 176 297 297 5 4 5 2 4 4 93542 11859 1520 11420 27742;27743;27744;27745 32192;32193;32194;32195;32196;32197 32192 6 LEEIAELVASSLPSPLR Unmodified 1823.004 0.0040293305 907 E9Q481;Q6P2K6 Smek1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A yes no 0 0 0 0 10.5 0.5 1 1 110.75 110.75 3 1.5269E-09 34172 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.005 64.654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 773.63 11860 907 11421 27746;27747 32198;32199 32198 2 LEELELDEQQR Unmodified 1400.6783 0.6783381 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 0 3 0 2 61.563 61.563 2;3 0.00038826 21883 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.045 43.26 50.431 0 0 0 18.867 38.904 47 0 0 0 19 37 2 0 0 0 1 2 5178.1 11861 1500 11422 27748;27749 32200;32201 32200 2 LEELHVIDVK Unmodified 1193.6656 0.66558856 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 7 0 1 65.175 65.175 3 0.046343 21592 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.873 12.049 88.547 0 85.985 75.757 0 148.17 83 0 83 74 0 139 1 0 1 1 0 1 3452.1 11862 1955 11423 27750 32202 32202 1 LEELVLDR Unmodified 985.54441 0.5444108 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 5 0 1 69.205 69.205 2 0.058351 25027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.973 21.825 0 87.414 53.743 36.021 64.715 47.189 0 83 56 37 65 46 0 1 1 1 1 1 5809.9 11863 547 11424 27751 32203 32203 1 LEELYTK Unmodified 894.46985 0.46984887 3352 Q9WVJ2;E9Q5I9;E9Q0U1;E9PY93 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 7 0 1 62.016 62.016 2 0.02695 20147 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.298 43.581 0 62.287 92.906 89.416 65.422 77.017 0 60 93 88 69 74 0 1 1 1 1 1 4879 11864 3352 11425 27752 32204 32204 1 LEEPEESK Unmodified 959.44476 0.44475633 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 3 0 1 44.662 44.662 2 0.023421 14171 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.221 30.206 0 0 0 39.196 66.189 0 0 0 0 37 65 0 0 0 0 1 1 0 3276.5 11865 1972 11426 27753 32205 32205 1 LEEQAALHK Unmodified 1037.5506 0.55055881 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 45.33 45.33 3 0.062236 13717 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.001 22.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11866 3266 11427 27754 32206 32206 1 LEEQCVDALQAQGFSR Unmodified 1849.8629 0.86286118 2574 Q8K010;E9Q484 Oplah 5-oxoprolinase yes no 0 0 0 0 4 0 1 63.993 63.993 3 0.038581 22768 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 33.828 11.63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11867 2574 11428 27755 32207 32207 1 LEEQDEFEK Unmodified 1165.5139 0.51389853 3160 Q9EP69 Sacm1l Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 0 3.33 0.471 2 1 55.082 55.082 2;3 0.0029801 19022 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.349 36.124 20.129 18.393 74.193 141.84 118.4 66.979 19 19 74 139 120 65 1 1 2 3 2 1 8179 11868 3160 11429 27756;27757;27758 32208;32209;32210 32208 3 LEEQLGR Unmodified 843.44503 0.4450311 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 5 0 1 44.612 44.612 2 0.032734 13347 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.097 8.0629 78.66 62.658 71.64 95.904 78.426 116.09 74 65 74 93 83 111 1 1 1 1 1 1 11911 11869 3335 11430 27759 32211 32211 1 LEESHNR Unmodified 883.41479 0.41479361 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 21.18 21.18 3 0.01415 3252 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.67 42.965 20.207 20.216 30.194 0 29.288 0 19 19 28 0 28 0 1 1 1 0 1 0 4857.6 11870 2701 11431 27760;27761 32212;32213 32213 2 LEESLEYQQFVANVEEEEAWINEK Unmodified 2925.3556 0.35561356 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 97.517 97.517 4 5.3085E-23 35712 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.18 103.13 4.292 12.494 16.411 8.8589 0 9.594 4 12 16 9 0 9 1 1 1 2 0 1 22627 11871 551 11432 27762;27763;27764 32214;32215;32216 32215 3 LEESVALR Unmodified 915.50255 0.50254598 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 7 3.54 1 1 1 1 51.62 51.62 2 2.5389E-07 16886 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 169.97 68.373 908.53 517.73 940.45 361.43 579.37 838.4 854 541 917 352 589 802 4 3 5 3 3 4 239910 11872 1786 11433 27765;27766;27767;27768 32217;32218;32219;32220;32221 32221 5 LEESYELIEK Unmodified 1251.6234 0.62344898 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 4.67 0.471 1 2 69.103 69.103 2;3 0.0012794 24953 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.636 41.164 59.728 58.974 96.938 20.252 27.359 88.763 56 56 93 19 28 84 2 1 2 1 1 3 11444 11873 121 11434 27769;27770;27771 32222;32223;32224 32223 3 LEETLPVIR Unmodified 1068.6179 0.61791009 1224 O54984 Asna1 ATPase Asna1 yes yes 0 0 0 0 5.5 0.5 1 1 65.445 65.445 2 0.00021389 22566 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130.56 71.966 69.173 0 96.065 94.549 73.061 0 65 0 93 93 74 0 1 0 1 1 1 0 7968 11874 1224 11435 27772;27773 32225;32226 32226 2 LEETVQAK Unmodified 916.48656 0.48656157 1289 O89053;G3UYK8 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 13 0 1 48.013 48.013 2 0.00071334 15354 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.89 45.55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11875 1289 11436 27774 32227 32227 1 LEEVGNQAR Unmodified 1014.5094 0.50942227 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 0 5 0 1 40.232 40.232 2 0.018302 11290 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.568 29.726 59.475 43.833 65.844 34.938 83.941 37.047 56 46 65 37 83 37 1 1 1 1 1 1 4296.7 11876 1325 11437 27775 32228 32228 1 LEEVMQELR Unmodified 1145.5751 0.575059 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 7 0 1 60.489 60.489 2 0.055579 19526 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.776 0.053964 59.408 33.933 85.513 43.941 65.972 0 56 37 83 46 65 0 1 1 1 1 1 0 6238.9 11877 3335 11438 27776 32229 32229 1 LEEVSPNLVR Unmodified 1154.6295 0.62953741 2736 Q91VD9;A0A087WQ77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 58.4 58.4 2;3 3.6599E-05 19310 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.99 73.12 78.801 42.545 64.903 65.444 92.105 96.51 74 46 65 65 93 93 1 1 1 2 1 2 9751.1 11878 2736 11439 27777;27778 32230;32231 32231 2 LEFEDGSVLK Unmodified 1135.5761 0.57610486 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 13 0 1 68.356 68.356 3 0.0041854 25218 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.426 24.894 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11879 3302 11440 27779 32232 32232 1 LEFPAPYWDNITDSAK Unmodified 1865.8836 0.88357984 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 0 7 0 1 85.529 85.529 3 0.00030261 31229 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.646 37.056 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2201.9 11880 67 11441 27780 32233 32233 1 LEGAEINK Unmodified 872.46035 0.46034682 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 6 0 1 50.4 50.4 2 0.024725 15541 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.038 14.479 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11881 810 11442 27781 32234 32234 1 LEGAGSATIAEVEMPFYEDK Unmodified 2155.9984 0.99835161 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 7.67 3.86 1 1 1 82.603 82.603 3;4 4.5939E-11 31269 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.02 82.322 68.976 54.19 83.397 64.166 121.34 66.395 65 56 83 65 121 65 3 2 2 2 3 2 7371.7 11882 1424 11443 27782;27783;27784 32235;32236;32237 32235 3 LEGDAALNK Unmodified 929.48181 0.48181054 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 5 0 1 51.487 51.487 3 0.023524 16714 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.805 21.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11883 2983 11444 27785 32238 32238 1 LEGDMATIQVYEETSGVSVGDPVLR Unmodified 2664.2953 0.29526191 1596 P50516;D3Z1B9;D3YWH3 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 6.2 3.43 2 2 1 85.019 85.019 3;4 1.3837E-25 32311 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.42 100.76 30.003 27.21 27.082 69.257 74.468 155.02 28 27 27 65 74 149 2 3 3 5 3 7 28885 11884 1596 11445 27786;27787;27788;27789;27790 32239;32240;32241;32242;32243;32244;32245;32246;32247;32248;32249 32241 11 LEGDNIQDK Unmodified 1030.4931 0.49310351 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 4 0 1 48.301 48.301 2 0.010686 15428 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.533 13.773 0 0 0 100.89 40.483 87.323 0 0 0 93 46 83 0 0 0 1 1 1 3285.7 11885 2276 11446 27791 32250 32250 1 LEGDNVNPESQLIQQNEQSESEK Unmodified 2614.1994 0.19944727 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 2 0 1 62.801 62.801 3 0.0060663 22143 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 34.459 27.013 0 0 9.738 0 19.874 0 0 0 9 0 19 0 0 0 1 0 1 0 1304.3 11886 1813 11447 27792 32251 32251 1 LEGFHTQISK Unmodified 1158.6033 0.60332266 1067 G3UXZ5;P97371;G3UXY0;G3UWN9;G3UXR1 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 8 0 1 52.474 52.474 3 0.0011036 15041 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.944 50.562 0 0 85.631 93.715 150.5 0 0 0 83 93 148 0 0 0 1 1 1 0 9560 11887 1067 11448 27793 32252 32252 1 LEGGSGGDSEVQR Unmodified 1289.5848 0.58477206 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 2.75 0.829 2 1 1 35.887 35.887 2;3 5.222E-15 10147 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 137.01 52.508 188.51 101.15 151.62 36.948 160.23 66.878 177 102 148 37 157 65 4 2 3 1 3 1 21643 11888 1713 11449 27794;27795;27796;27797 32253;32254;32255;32256 32255 4 LEGIPAYIVVPQTAPNCK Unmodified 1969.0343 0.034283601 3297 Q9QZX7;Z4YMF3 Srr Serine racemase yes no 0 0 0 0 10 2.16 1 1 1 79.067 79.067 3;4 1.0037E-06 30351 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.902 47.811 29.812 48.944 39.062 58.009 46.298 39.442 28 46 37 56 46 37 1 1 1 2 1 1 10745 11889 3297 11450 27798;27799;27800 32257;32258;32259 32259 3 LEGLLAFK Unmodified 889.5273 0.52730417 150 A0A0R4J023;Q9JLZ3 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 81.029 81.029 2;3 0.012438 25547 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.962 21.917 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11890 150 11451 27801;27802 32260;32261 32260 2 LEGLSENTDYTVLLQAAQEATR Unmodified 2421.2023 0.2023478 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.67 2.56 1 1 2 1 1 89.723 89.723 3;4 7.4789E-35 34201 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.28 121.25 67.387 55.038 8.2686 39.525 50.923 59.714 66 53 9 37 51 57 3 4 1 3 4 4 67334 11891 2479 11452 27803;27804;27805;27806;27807;27808 32262;32263;32264;32265;32266;32267;32268;32269 32262 8 LEGLSENTDYTVLLQAAQEATR Deamidation (N) 2422.1864 0.18636339 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 1 0 0 5 0 1 91.447 91.447 3 1.0796E-05 34671 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.603 36.918 0 0 2.9617 6.3815 0 0 0 0 3 6 0 0 0 0 1 1 0 0 1098.7 11892 2479 11452 27809 32270 32270 933 1 LEGNTVGVEAAR Unmodified 1214.6255 0.62551466 1552 P46061;A0A2R8W753;A0A2R8VHK9 Rangap1 Ran GTPase-activating protein 1 yes no 0 0 0 0 4 0 1 46.863 46.863 2 0.003142 14748 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.121 35.223 0 0 29.472 18.494 27.44 29.065 0 0 28 19 28 28 0 0 1 1 1 1 2513.6 11893 1552 11453 27810 32271 32271 1 LEGQGDEPTPK Unmodified 1169.5564 0.55643205 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 4 0 1 44.789 44.789 2 0.0094787 13781 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.641 24.217 20.091 0 49.671 0 0 0 19 0 46 0 0 0 1 0 1 0 0 0 3009.7 11894 2983 11454 27811 32272 32272 1 LEGQMGEDGNSIK Unmodified 1376.6242 0.62419403 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 5 0.816 1 1 1 53.253 53.253 2;3 1.167E-06 17511 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.72 70.36 69.566 0 30.048 0 48.116 29.848 65 0 28 0 46 28 2 0 1 0 1 1 12304 11895 71;74;949;1367 11455 27812;27813;27814 32273;32274;32275 32274 3 LEGSEVQLVEYEASAAGLIR Unmodified 2133.0954 0.095363533 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 5 0 1 89.777 89.777 3 4.2116E-13 34238 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.03 85.697 5.3185 9.2174 0 0 0 9.594 5 9 0 0 0 9 1 1 0 0 0 1 1421.7 11896 2845 11456 27815 32276 32276 1 LEGSFLGGSEAGER Unmodified 1407.663 0.66302238 1898 Q0VGU4 Vgf yes yes 0 0 0 0 5 0 1 59.792 59.792 2 0.0035437 20646 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.864 36.535 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 1676.9 11897 1898 11457 27816 32277 32277 1 LEGTNVQEAQNILK Deamidation (N) 1556.8046 0.80460124 3396 Q9Z2I8 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 1 0 0 6 0 1 64.954 64.954 3 0.012715 22323 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.482 18.654 39.265 45.72 34.503 58.138 53.908 58.158 37 46 37 56 56 56 1 1 1 1 1 1 3013.8 11898 3396 11458 27817 32278 32278 1144 1 LEGVEGVAHIIDPK Unmodified 1475.7984 0.79839365 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 70.355 70.355 3 5.632E-05 24956 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.669 49.128 98.924 100.86 59.898 87.149 0 88.478 93 102 65 83 0 83 1 1 1 1 0 1 7396.2 11899 3204 11459 27818 32279 32279 1 LEGWELFPTPK Unmodified 1315.6812 0.68123863 1095 G5E814;Q9D8B4 Ndufa11 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 yes no 0 0 0 0 8 0 1 84.192 84.192 3 0.00096943 30044 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.153 45.28 0 69.16 0 0 0 78.884 0 65 0 0 0 74 0 1 0 0 0 1 15831 11900 1095 11460 27819 32280 32280 1 LEGYWGEAQSLCQAVDEHLR Unmodified 2360.0855 0.085543903 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6 0 1 82.291 82.291 3 0.00031332 30500 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.433 33.491 0 0 8.4363 29.221 46.774 0 0 0 9 28 46 0 0 0 1 1 1 0 3039.9 11901 2255 11461 27820 32281 32281 1 LEHEEGAPCTAIR Unmodified 1481.6933 0.69327665 308 A0A1L1SUS7;Q04899;Q8K0D0;Q04735 Cdk18;Cdk17;Cdk16 Cyclin-dependent kinase 18;Cyclin-dependent kinase 17;Cyclin-dependent kinase 16 yes no 0 0 0 0 3.5 0.5 1 1 40.239 40.239 3 0.00010725 12142 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.18 56.182 30.044 0 0 49.973 16.24 66.979 28 0 0 46 19 65 1 0 0 1 1 2 6124.5 11902 308 11462 27821;27822 32282;32283 32282 2 LEHEYIHNFK Unmodified 1328.6513 0.65133548 2243;722 D3YYK8;E9Q6X0;Q8R001;Q3TG90;Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre2;Mapre3 Microtubule-associated protein RP/EB family member 2;Microtubule-associated protein RP/EB family member 3 no no 0 0 0 0 7.75 3.11 1 1 1 1 49.31 49.31 4 0.00027011 14114 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.15 64.033 722.67 280.02 392.53 444.92 285.65 641.32 677 296 385 426 287 607 5 3 3 4 3 4 55816 11903 722;2243 11463 27823;27824;27825;27826 32284;32285;32286;32287;32288 32287 5 LEHLAEK Unmodified 838.45487 0.45486751 3209 Q9JI91 Actn2 Alpha-actinin-2 yes yes 0 0 0 0 6 0 1 45.09 45.09 3 0.041392 13072 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.995 11.95 79.128 54.248 0 0 77.404 0 74 56 0 0 74 0 1 1 0 0 1 0 4089.5 11904 3209 11464 27827 32289 32289 1 LEHQGIK Unmodified 823.4552 0.45520186 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 6.5 0.5 1 1 37.463 37.463 3 0.0088478 8651 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.116 30.555 48.978 75.433 0 0 106.69 0 46 74 0 0 102 0 1 1 0 0 1 0 3912 11905 2485 11465 27828;27829 32290;32291 32291 2 LEHVLPNPQLLCCDNTQNDANTK Unmodified 2693.2537 0.25374822 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 7 0 1 66.604 66.604 4 0.0074849 22356 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.794 20.339 29.904 27.776 0 29.546 56.249 28.243 28 28 0 28 56 28 1 1 0 1 1 1 2445.8 11906 2691;1024 11466 27830 32292 32292 1 LEIAPPFRPR Unmodified 1194.6873 0.68732706 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 1 9.5 0.5 1 1 58.064 58.064 3 0.00010108 16957 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.815 42.638 197.92 124.1 173.23 239.6 193.88 247.36 186 130 176 232 204 236 2 1 1 2 2 1 65203 11907 1783 11467 27831;27832 32293;32294 32293 2 LEIEAETDR Unmodified 1074.5193 0.51931826 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 6 4.97 1 1 1 50.377 50.377 2 3.2683E-06 16498 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 158.37 88.11 319.15 458.93 346.96 273.67 459.3 301.06 300 457 350 271 461 288 2 4 3 2 3 2 94473 11908 118;1534 11468 27833;27834;27835 32295;32296;32297;32298 32295 4 LEIEAETDRVTGTNK Unmodified 1674.8424 0.84244331 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 4 0 1 55.007 55.007 3 0.0089804 18661 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.216 39.428 78.928 0 79.67 0 45.122 87.19 74 0 74 0 46 83 1 0 1 0 1 1 4319.3 11909 118;1534 11469 27836 32299 32299 1 LEIEPEWAYGK Unmodified 1333.6554 0.65541781 2161 Q62446;A0A1Y7VJ86;A0A1Y7VP01;A0A1Y7VLK0 Fkbp3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes no 0 0 0 0 9.5 3.5 1 1 74.185 74.185 3 0.0029632 27981 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.676 27.849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11910 2161 11470 27837;27838 32300;32301 32301 2 LEILQIHTK Unmodified 1093.6495 0.64954457 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9.5 1.12 1 1 1 1 62.641 62.641 3 0.00021077 19283 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.35 63.61 418.99 450.73 73.13 371.95 447.87 573.52 392 445 74 352 456 550 3 4 1 4 3 4 169790 11911 1875 11471 27839;27840;27841;27842 32302;32303;32304;32305;32306;32307 32304 6 LEIVSDGK Unmodified 859.4651 0.46509784 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 6 0 1 57.897 57.897 3 0.0058323 19072 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.485 43.972 0 0 0 29.913 36.726 47.988 0 0 0 28 38 46 0 0 0 1 1 1 1871.6 11912 2286 11472 27843 32308 32308 1 LEKHELIEFR Unmodified 1312.7139 0.71393574 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 9.33 2.62 1 1 1 54.054 54.054 4 0.00042885 16940 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.913 74.075 730.77 413.74 360.42 690.3 510.3 471.72 685 432 363 660 530 454 4 3 3 4 3 2 60615 11913 2185 11473 27844;27845;27846 32309;32310;32311;32312 32309 4 LELADYEAENLAR Unmodified 1505.7362 0.73618733 11 A0A087WSJ9;A0A087WSH2;A0A087WPW1;F6WDS8;A0A087WQG6;A0A087WNZ9;A0A087WRP8;A0A087WPC4;A0A087WPD1;Q9Z2H2;A0A0J9YUE4;Q3UTM5 Rgs6 Regulator of G-protein signaling 6 yes no 0 0 0 0 4.5 0.5 1 1 70.098 70.098 3 0.0020266 25363 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.314 32.435 9.657 0 0 20.767 0 29.848 9 0 0 19 0 28 1 0 0 1 0 1 2501.1 11914 11 11474 27847;27848 32313;32314 32313 2 LELADYEAESLAR Unmodified 1478.7253 0.72528829 2333 Q80XD3;A0A0A6YW36;O54829 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 3.5 0.5 1 1 71.251 71.251 2 1.8631E-18 25887 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 148.19 114.24 0 0 0 0 56.251 67.685 0 0 0 0 56 65 0 0 0 0 1 1 6665.5 11915 2333 11475 27849;27850 32315;32316 32316 2 LELAQYR Unmodified 891.48142 0.48141661 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8.5 2.69 1 1 1 1 53.686 53.686 2 0.0063889 16270 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.23 72.087 1472.6 1139.6 1124.2 1061.7 1529 1145.5 1384 1182 1136 1059 1546 1111 5 5 4 5 5 4 724320 11916 1881 11476 27851;27852;27853;27854 32317;32318;32319;32320;32321 32318 5 LELDAAK Unmodified 758.41742 0.41741937 1811 P70365;A0A1W2P7C1 Ncoa1 Nuclear receptor coactivator 1 yes no 0 0 0 0 13 0 1 50.478 50.478 2 0.038508 16553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.597 79.597 168.05 124.59 143.61 232.8 184.89 183.41 158 130 150 224 193 177 1 1 1 1 1 1 7636.7 11917 1811 11477 27855 32322 32322 1 LELDGGR Unmodified 758.39227 0.39226725 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 0 0 0 5 0 1 46.127 46.127 2 0.018664 14109 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.92 59.599 59.689 0 67.08 66.199 45.075 0 56 0 65 65 46 0 1 0 1 1 1 0 6056.1 11918 889 11478 27856 32323 32323 1 LELFHPFFK Unmodified 1176.6332 0.63316622 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 11 0 1 79.253 79.253 3 0.0026119 24302 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.223 36.123 0 0 0 89.34 73.3 0 0 0 0 83 74 0 0 0 0 1 1 0 8257.5 11919 2773 11479 27857 32324 32324 1 LELFLPEEYPMAAPK Unmodified 1746.8902 0.89024513 1688 P61089;A0A1W2P7Z3 Ube2n Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 0 8.43 2.06 1 1 3 1 1 89.545 89.545 2;3;4 2.1179E-05 33185 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.678 52.138 139.96 63.075 85.704 118.92 61.292 58.637 131 61 84 113 62 56 4 3 3 4 4 3 27250 11920 1688 11480 27858;27859;27860;27861;27862;27863;27864 32325;32326;32327;32328;32329;32330;32331 32326 7 LELFPVELEK Unmodified 1215.6751 0.67509062 2255;1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4;H3BJA6;Q6R891 Ppp1r9a;Ppp1r9b Neurabin-2 no no 0 0 0 0 8 0 1 85.121 85.121 3 0.0013922 30444 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.977 42.171 0 29.792 0 9.837 0 0 0 28 0 9 0 0 0 1 0 1 0 0 1660.6 11921 1119;2255 11481 27865 32332 32332 1 LELLAAYEEVIR Unmodified 1417.7817 0.78168095 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 7.5 0.5 1 1 90.89 90.89 2 0.001014 33644 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.566 46.417 59.706 75.774 0 69.329 46.751 0 56 75 0 65 46 0 2 2 0 3 1 0 5037 11922 3267 11482 27866;27867 32333;32334;32335 32333 3 LELLLQIANK Unmodified 1153.7071 0.70705945 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 11.5 0.5 1 1 92.305 92.305 2 0.0001638 29613 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.802 81.187 30.044 14.896 0 20.767 95.574 19.168 28 14 0 19 92 19 1 1 0 1 2 1 4487 11923 581 11483 27868;27869 32336;32337;32338 32336 3 LELLLQK Unmodified 855.54295 0.54295423 455 A2AFF6;O35638;D6RHQ7;D6REF2;F8WHU7;Q9D3E6 Stag2;Stag1 Cohesin subunit SA-2;Cohesin subunit SA-1 yes no 0 0 0 0 10 0 1 77.201 77.201 2 0.04575 23730 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.674 0 0 59.584 0 39.778 35.225 48.031 0 56 0 37 37 46 0 1 0 1 1 1 2266.8 11924 455 11484 27870 32339 32339 1 LELNENPDILHQDIQQVR Unmodified 2173.1127 0.11274493 3062 Q9D4C9 Clvs1 Clavesin-1 yes yes 0 0 0 0 4 0 1 65.64 65.64 3 4.221E-07 23471 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.8 61.746 0 9.576 0 39.943 26.454 29.093 0 9 0 37 28 28 0 1 0 1 1 1 4074 11925 3062 11485 27871 32340 32340 1 LELNENPDTLHQDIQEVR Unmodified 2162.0604 0.060375011 329 A0A1W2P7U8;Q8BG92 Clvs2 Clavesin-2 yes no 0 0 0 0 4 0 1 61.099 61.099 3 5.7E-05 21494 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.767 44.486 49.273 16.894 0 0 48.116 0 46 19 0 0 46 0 1 1 0 0 1 0 2656.5 11926 329 11486 27872 32341 32341 1 LELQGIQGAVDHAAAFGR Unmodified 1851.9591 0.95914482 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 9.5 3.5 1 1 71.459 71.459 3 0.00012571 26626 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.72 30.522 117.81 101.72 130.77 71.78 195.78 191.62 111 102 130 74 195 185 2 1 2 1 1 2 21894 11927 2899 11487 27873;27874 32342;32343 32343 2 LELQGSNSR Unmodified 1002.5094 0.50942227 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 6 0 1 42.131 42.131 2 0.0094082 11595 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.143 24.147 54.122 49.63 58.904 62.069 0 0 51 51 60 60 0 0 1 1 1 1 0 0 7999 11928 1333 11488 27875 32344 32344 1 LELSENR Unmodified 859.43995 0.43994572 720 D3YYE1;D3Z7M9;O35381;F6UFG6;Q64G17;Q9EST5 Anp32a;Anp32c;Anp32b Acidic leucine-rich nuclear phosphoprotein 32 family member A;Putative acidic leucine-rich nuclear phosphoprotein 32 family member C;Acidic leucine-rich nuclear phosphoprotein 32 family member B yes no 0 0 0 0 5 0 1 44.464 44.464 2 0.027043 13287 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.308 24.221 69.372 74.058 0 78.828 109.19 96.022 65 74 0 74 111 93 1 1 0 1 1 1 5077.3 11929 720 11489 27876 32345 32345 1 LELTPVAIQAGR Unmodified 1266.7296 0.7295858 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 8 0 1 66.943 66.943 3 0.00020779 21868 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.951 43.079 9.477 0 30.248 0 19.874 0 9 0 28 0 19 0 1 0 1 0 1 0 2067.4 11930 3253 11490 27877 32346 32346 1 LELVAAINSNGGSTYYPDTVK Unmodified 2211.1059 0.10592822 1409 P18524 Ig heavy chain V region RF yes yes 0 0 0 0 13 0 1 82.81 82.81 3 0.00034733 32251 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.397 24.744 39.701 0 0 0 67.031 27.935 37 0 0 0 65 28 1 0 0 0 1 1 5212.8 11931 1409 11491 27878 32347 32347 1 LELVSYFGK Unmodified 1054.5699 0.56989727 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 9.29 3.65 1 2 1 1 1 1 80.132 80.132 2;3 2.0564E-08 25105 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 167.33 90.047 1411.7 1578.4 640.26 326.26 1710.2 1883 1334 1573 646 315 1694 1804 6 6 3 4 5 6 429010 11932 1390 11492 27879;27880;27881;27882;27883;27884;27885 32348;32349;32350;32351;32352;32353;32354;32355;32356 32351 9 LELWCTDVK Unmodified 1162.5692 0.56924534 3352 Q9WVJ2;E9Q5I9 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 7.5 0.5 1 1 73.346 73.346 2;3 0.01244 24799 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.325 29.582 39.468 105.87 0 30.604 29.288 0 37 102 0 28 28 0 1 2 0 1 1 0 5502.7 11933 3352 11493 27886;27887 32357;32358 32358 2 LEMLEIIEAIYK Unmodified 1463.7946 0.79455383 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 10 1.87 1 1 1 1 106.3 106.3 3 3.2093E-12 37056 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.45 79.53 27.781 16.062 25.938 49.199 80.901 70.844 26 16 26 47 82 68 3 2 2 3 5 4 13644 11934 2392 11494 27888;27889;27890;27891 32359;32360;32361;32362;32363;32364 32360 6 LEMNLGLQK Unmodified 1044.5638 0.56376603 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 0.816 1 1 1 68.39 68.39 2 0.0006489 21842 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.12 50.166 0 97.549 152.22 46.209 0 59.696 0 93 148 46 0 56 0 1 2 1 0 1 20872 11935 2148 11495 27892;27893;27894 32365;32366;32367 32366 3 LEMYVLNPVK Unmodified 1204.6526 0.65258104 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 10.2 1.47 2 2 1 76.197 76.197 2;3 0.0016182 23221 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.698 49.266 108.98 130.21 213.85 161.32 203.72 409.93 102 130 204 158 203 390 2 3 3 3 2 5 70165 11936 1382 11496 27895;27896;27897;27898;27899 32368;32369;32370;32371;32372 32371 5 LENEIQTYR Unmodified 1164.5775 0.57750184 659 CON__P13645;CON__P02535-1;A2A513;P02535 Krt10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 4.5 0.5 1 1 52.221 52.221 2 0.0030178 17315 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.428 53.104 29.547 31.099 57.208 95.726 44.698 58.421 28 32 56 97 46 56 1 1 1 2 1 1 19553 + 11937 659 11497 27900;27901 32373;32374 32373 2 LENFEAAVHLYGK Unmodified 1489.7565 0.75652884 317 Q8BJU0;A0A1W2P6P1;A0A1W2P7I5 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 9.33 2.62 1 1 1 71.893 71.893 3 0.00010725 24894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.18 58.883 128.43 121.51 272.12 222.64 201.25 155.5 121 121 268 222 203 148 2 2 3 3 2 2 20541 11938 317 11498 27902;27903;27904 32375;32376;32377 32375 3 LENGHGLDR Unmodified 1009.4941 0.49410656 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 4 0 1 26.196 26.196 3 0.0395 5161 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.395 13.308 9.5427 0 19.213 29.11 18.537 0 9 0 19 28 19 0 1 0 1 1 1 0 1802.5 11939 3285 11499 27905 32378 32378 1 LENGLIKEPCGTPEYLAPEVVGR Deamidation (N) 2541.2785 0.27848963 1986 Q3UHL1 Camkv CaM kinase-like vesicle-associated protein yes yes 0 1 0 1 5.25 0.433 3 1 74.01 74.01 3;4 1.2699E-15 27236 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.449 71.349 39.407 109.22 118.02 113.72 30.26 83.351 37 107 120 111 32 79 1 3 3 3 1 2 24491 11940 1986 11500 27906;27907;27908;27909 32379;32380;32381;32382 32379 792 4 LENIISSLK Unmodified 1015.5914 0.59136099 2048 Q5H8C4;A0A286YCT3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 10 0 1 79.873 79.873 2 0.018874 24979 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.056 28.944 0 29.343 26.844 37.969 46.372 0 0 28 28 37 46 0 0 1 1 1 1 0 2256.6 11941 2048 11501 27910 32383 32383 1 LENLSLNPYEGLLLQFPFVA Unmodified 2276.2093 0.20927108 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 11 2 1 1 123.48 123.48 3 2.5891E-08 45595 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.742 52.671 5.34 4.9599 0 0 0 2 5 5 0 0 0 2 1 1 0 0 0 1 5385.2 11942 1348 11502 27911;27912 32384;32385 32385 2 LENLVYYNR Unmodified 1182.6033 0.60332266 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 8 0 1 63.833 63.833 2 0.0017863 20375 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.009 54.275 168.52 0 170.11 0 162.45 173.39 158 0 158 0 161 167 1 0 1 0 1 1 17436 11943 1986 11503 27913 32386 32386 1 LENYPIPELGPNDVLLK Unmodified 1923.0353 0.035329459 2176 Q64442 Sord Sorbitol dehydrogenase yes yes 0 0 0 0 6.5 0.5 1 1 86.863 86.863 3 4.8573E-06 32503 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.829 63.876 9.6047 0 28.473 39.837 0 40.508 9 0 28 38 0 38 1 0 2 2 0 2 5812.3 11944 2176 11504 27914;27915 32387;32388 32387 2 LEPEAWK Unmodified 871.44397 0.44396847 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 6 0 1 60.86 60.86 2 0.027217 20440 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.187 36.47 99.077 141.22 0 99.448 117 114.99 93 139 0 93 120 111 1 1 0 1 1 1 15834 11945 1148 11505 27916 32389 32389 1 LEPLLAPK Unmodified 879.54295 0.54295423 1215 O35954 Pitpnm1 Membrane-associated phosphatidylinositol transfer protein 1 yes yes 0 0 0 0 9 0 1 66.719 66.719 2 0.021629 21084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.282 63.125 99.249 107.16 0 118.59 145.11 123.78 93 107 0 111 148 120 1 1 0 1 1 1 4578.3 11946 1215 11506 27917 32390 32390 1 LEPNLQAQMYR Unmodified 1361.6762 0.67617003 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 6 0 1 58.622 58.622 2 5.3602E-05 19408 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.943 63.647 39.701 0 0 39.373 56.767 0 37 0 0 37 56 0 1 0 0 1 1 0 6612.4 11947 1401 11507 27918 32391 32391 1 LEPPLIPFMPLLIK Unmodified 1619.9725 0.97245861 516 A2ASW8;Q9EQZ6 Rapgef4 Rap guanine nucleotide exchange factor 4 yes no 0 0 0 0 11.5 0.5 1 1 107.63 107.63 3 0.00032353 29560 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.034 45.988 27.898 0 9.2269 24.589 0 42.64 26 0 9 23 0 40 2 0 1 2 0 2 8356.3 11948 516 11508 27919;27920 32392;32393;32394;32395;32396 32395 5 LEPSDLSEDSEYDSIWTAHSYR Unmodified 2599.1351 0.1350561 3191 Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 0 4 0 1 71.265 71.265 3 2.1376E-09 25922 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.325 62.325 0 9.576 0 0 19.874 0 0 9 0 0 19 0 0 1 0 0 1 0 2827.6 11949 3191 11509 27921 32397 32397 1 LEPSESLEENQR Unmodified 1429.6685 0.66850169 1885 Q04690;A0A1W2P863 Nf1 Neurofibromin yes no 0 0 0 0 2 0 1 47.406 47.406 2 0.0010216 15003 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.294 40.907 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 1146.1 11950 1885 11510 27922 32398 32398 1 LEPTVPEDSGR Unmodified 1198.583 0.58298115 611 E9PZ16;B1B0C7;Q05793 Hspg2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes no 0 0 0 0 4 0 1 47.177 47.177 2 0.01661 14995 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.888 27.276 0 0 30.296 0 18.867 29.31 0 0 28 0 19 28 0 0 1 0 1 1 2723.7 11951 611 11511 27923 32399 32399 1 LEQEEQQR Unmodified 1058.4993 0.49925152 3088 Q9D880 Timm50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 0 0 0 0 1.5 0.5 1 1 32.252 32.252 2 0.0014777 7755 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.76 95.599 0 57.034 88.887 65.267 25.521 68.562 0 55 88 65 28 65 0 2 2 2 1 2 12437 11952 3088 11512 27924;27925 32400;32401 32400 2 LEQEHLLEDIAHVR Unmodified 1700.8846 0.8845829 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 13 0 1 62.716 62.716 4 5.9747E-05 22460 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.511 67.925 59.392 0 116.95 64.075 0 88.478 56 0 111 65 0 83 1 0 1 1 0 1 7750 11953 1415 11513 27926 32402 32402 1 LEQEIQALESEESQISAK Unmodified 2031.0008 0.0007944461 1012;2447 F7AA26;Q8BR92;G3X9P1 Pakap;Palm2 Paralemmin-2 no no 0 0 0 0 4 0 1 86.485 86.485 3 5.6132E-46 32895 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 154.74 127.59 0 19.994 13.302 14.509 0 0 0 19 14 14 0 0 0 1 1 1 0 0 3928.5 11954 1012;2447 11514 27927 32403 32403 1 LEQELFSGGNTGINFEK Unmodified 1881.9109 0.91085723 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 9.5 3.5 1 1 78.93 78.93 3;4 1.9346E-08 30265 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.49 90.789 29.647 36.774 74.801 65.349 65.835 0 28 37 74 65 65 0 1 1 2 2 1 0 6878.2 11955 2146 11515 27928;27929 32404;32405 32405 2 LEQGQAIDDLMPAQK Oxidation (M) 1671.8138 0.81378572 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 1 0 5 0.816 1 1 1 60.345 60.345 3 4.4302E-05 21130 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.28 77.342 20.121 116.26 29.092 20.069 55.329 146.6 19 111 28 19 56 139 1 3 1 1 2 3 10946 11956 1883 11516 27930;27931;27932 32406;32407;32408;32409 32406 158 4 LEQGQAIDDLMPAQK Unmodified 1655.8189 0.8188711 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 7.64 3.42 2 1 3 2 3 68.868 68.868 2;3;4 2.7956E-16 25277 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.31 93.425 836.47 642.14 1069.9 900.99 941.56 947.85 787 668 1060 892 957 909 8 10 11 11 11 9 338650 11957 1883 11516 27933;27934;27935;27936;27937;27938;27939;27940;27941;27942;27943 32410;32411;32412;32413;32414;32415;32416;32417;32418;32419;32420;32421;32422 32422 13 LEQIPEGSHK Unmodified 1136.5826 0.58258722 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 5 0 1 43.984 43.984 3 0.0066006 13008 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.087 19.502 48.852 35.151 55.218 67.754 0 99.138 46 37 56 65 0 93 1 1 1 1 0 1 7421.1 11958 860 11517 27944 32423 32423 1 LEQISPFPFDLIMR Unmodified 1704.8909 0.89091383 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 9 0 1 99.915 99.915 3 0.0016499 35616 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.501 34.12 0 14.748 8.8531 0 0 0 0 14 9 0 0 0 0 1 1 0 0 0 2400.6 11959 628 11518 27945 32424 32424 1 LEQLLQALHADSQASR Unmodified 1778.9275 0.92751034 379 A0A2I3BQ43;A0JP53;D3YXJ0 Dgkh Diacylglycerol kinase yes no 0 0 0 0 9 0 1 79.053 79.053 3 0.009702 26924 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.616 21.405 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11960 379 11519 27946 32425 32425 1 LEQLQAVLSSYLEK Unmodified 1619.877 0.8770379 2032 Q4VBE8 Wdr18 WD repeat-containing protein 18 yes yes 0 0 0 0 10.5 0.5 1 1 99.353 99.353 3 0.0083145 32740 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.005 22.776 42.597 5.5177 49.622 0 15.69 29.848 40 6 46 0 15 28 2 1 1 0 1 1 2588.5 11961 2032 11520 27947;27948 32426;32427 32427 2 LEQLSAGLDGPPR Unmodified 1351.7096 0.70957864 2996 Q9CYT6;D3YTR7 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 6.75 0.829 2 1 1 63.832 63.832 2 2.5887E-18 20990 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.5 109.34 79.746 49.671 80.376 62.904 61.939 92.041 75 53 80 63 65 88 2 2 2 2 2 2 19607 11962 2996 11521 27949;27950;27951;27952 32428;32429;32430;32431 32430 4 LEQMEDPDDVIALD Unmodified 1601.7131 0.71306862 3375 Q9Z1F9 Uba2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 0 2 0 1 86.145 86.145 2 0.0090963 29012 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.237 34.106 0 5.32 0 0 5.23 0 0 5 0 0 5 0 0 1 0 0 1 0 995.24 11963 3375 11522 27953 32432 32432 1 LEQMFLVALADTVATTSTELDENRDK Unmodified 2909.4328 0.43281802 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 9.33 2.62 1 1 1 111.6 111.6 4 4.5001E-25 37739 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.65 84.259 20.308 15.655 0 7.651 3.138 17.056 19 16 0 7 3 16 3 3 0 1 1 2 3012.1 11964 570 11523 27954;27955;27956 32433;32434;32435 32433 3 LEQQLAK Unmodified 828.47052 0.47051757 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 13 0 1 49.174 49.174 2 0.027526 15907 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.531 36.549 158.99 183.21 173.82 108.26 143.86 173.92 150 185 176 111 148 167 1 1 1 1 1 1 12127 11965 3336 11524 27957 32436 32436 1 LEQSEAQLGR Unmodified 1129.5728 0.57275081 1212 O35864 Cops5 COP9 signalosome complex subunit 5 yes yes 0 0 0 0 4 0 1 44.686 44.686 2 8.9483E-20 13744 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 144.47 81.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11966 1212 11525 27958 32437 32437 1 LEQSNVPEGPGSGTGDESSGPR Unmodified 2155.9618 0.96178318 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 46.203 46.203 3 4.0572E-22 14334 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.5 105.46 120.63 55.758 57.299 28.276 100.16 39.442 113 56 56 28 97 37 4 2 2 1 3 1 47874 11967 2186 11526 27959;27960;27961;27962 32438;32439;32440;32441 32441 4 LEQVITLMSLDS Unmodified 1347.6956 0.69556806 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 8.5 0.5 1 1 104.12 104.12 2 0.0010216 36365 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.294 53.83 0 12.768 4.328 9.837 7.1826 20.049 0 12 4 9 7 19 0 1 1 1 1 2 1688.5 11968 2317 11527 27963;27964 32442;32443 32442 2 LEQVLSSMK Unmodified 1033.5478 0.54778161 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 73.694 73.694 2;3 0.00073444 22231 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.7 37.792 206.76 141.6 115.38 79.849 157.31 125 194 148 111 74 158 120 2 2 1 1 2 1 14212 11969 2734 11528 27965;27966 32444;32445 32445 2 LESENNEYER Unmodified 1281.5473 0.54732392 2778 Q91YR7 Prpf6 Pre-mRNA-processing factor 6 yes yes 0 0 0 0 1.5 0.5 1 1 38.904 38.904 2 0.0016876 10683 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.379 59.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11970 2778 11529 27967;27968 32446;32447 32446 2 LESGSICK Unmodified 892.43242 0.43241751 2627 Q8R050 Gspt1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 0 6 0 1 48.075 48.075 2 0.019545 14443 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.516 33.204 39.213 45.574 43.412 76.942 71.89 57.645 37 46 46 74 74 56 1 1 1 1 1 1 3555.5 11971 2627 11530 27969 32448 32448 1 LESIISGAALMADSSCTR Unmodified 1880.8972 0.89719777 799;1454 E0CXB9;Q61301;Q8BS72;P26231 Ctnna2;Ctnna1 Catenin alpha-2;Catenin alpha-1 no no 0 0 0 0 13 0 1 85.105 85.105 3 0.0028146 33312 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.633 30.273 20.281 0 17.776 60.149 0 29.848 19 0 19 56 0 28 1 0 1 1 0 1 2539.1 11972 799;1454 11531 27970 32449 32449 1 LESLLGK Unmodified 758.4538 0.45380487 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 9.5 0.5 1 1 70.738 70.738 2 0.027113 22945 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.065 12.887 344.24 266.76 347.98 0 138.94 460.81 324 278 338 0 139 436 2 2 2 0 1 2 28077 11973 3192 11532 27971;27972 32450;32451 32450 2 LESLPAQLPR Unmodified 1122.6397 0.63970816 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 8.5 2.69 1 1 1 1 62.722 62.722 2;3 3.5624E-07 20541 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.26 85.856 336.71 245.95 89.607 20.259 357.41 405.65 315 250 83 19 353 388 3 3 2 1 4 5 43451 11974 1093 11533 27973;27974;27975;27976 32452;32453;32454;32455;32456;32457 32453 6 LESLQHHEEL Unmodified 1233.599 0.59896556 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 4 0 1 48.783 48.783 3 0.00025022 15654 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.658 70.152 0 39.368 0 39.373 56.767 0 0 37 0 37 56 0 0 1 0 1 1 0 12833 11975 2507 11534 27977 32458 32458 1 LESTVLSILEAQASTLVGEK Unmodified 2087.1362 0.13616572 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 110.2 110.2 3 5.8899E-30 37574 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.06 123.88 9.657 26.445 14.488 18.099 25.921 24.99 9 25 14 17 25 24 1 3 2 2 3 3 7789 11976 3285 11535 27978;27979;27980;27981;27982 32459;32460;32461;32462;32463;32464;32465 32461 7 LETAVNLAWTAGNSNTR Unmodified 1816.9068 0.9067749 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 9.5 0.5 1 1 72.353 72.353 3 0.0001112 23706 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.94 37.724 59.359 112.33 169.42 95.136 51.877 67.81 56 112 167 93 56 65 1 2 2 1 1 1 25169 11977 978;2097 11536 27983;27984 32466;32467 32466 2 LETDILFGHR Unmodified 1199.6299 0.62987176 1670 P60487;A0A2R8W6I7 Pdxp Pyridoxal phosphate phosphatase yes no 0 0 0 0 8.5 2.69 1 1 1 1 64.355 64.355 3 2.1805E-05 21339 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.55 78.693 78.96 122.8 37.02 117.54 83.728 0 74 121 37 111 83 0 2 3 1 3 2 0 12981 11978 1670 11537 27985;27986;27987;27988 32468;32469;32470;32471 32469 4 LETELGRPSER Unmodified 1285.6626 0.66262845 2261 Q6ZPE2;H3BKD9 Sbf1 Myotubularin-related protein 5 yes no 0 0 0 1 4 0 1 41.881 41.881 3 0.018986 12414 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.028 26.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11979 2261 11538 27989 32472 32472 1 LETQPQEEYEVVNAEIK Unmodified 2017.9844 0.9844161 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 4 0 1 68.99 68.99 3 0.00016945 24917 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.003 40.407 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2783.8 11980 2490 11539 27990 32473 32473 1 LETYYNATEPVISFYDKR Unmodified 2208.0739 0.07389981 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 1 7 0 1 75.013 75.013 4 0.0005127 26220 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.993 34.401 0 59.584 0 70.054 52.701 77.38 0 56 0 65 56 74 0 1 0 1 1 1 5240.8 11981 3306 11540 27991 32474 32474 1 LEVASLLLQK Unmodified 1112.6805 0.68051035 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812 Ank3 Ankyrin-3 yes no 0 0 0 0 11 0.816 1 1 1 83.921 83.921 2 4.8041E-07 26645 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.33 50.649 0 14.896 0 29.528 85.22 0 0 14 0 28 84 0 0 1 0 1 2 0 15480 11982 3450 11541 27992;27993;27994 32475;32476;32477 32475 3 LEVEANNAFDQYR Unmodified 1567.7267 0.72668527 495;1565 A2AMW0;F7CAZ6;P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 4 0 1 63.494 63.494 3 0.010499 22512 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.968 20.176 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 2613 11983 495;1565 11542 27995 32478 32478 1 LEVGAPYLR Unmodified 1016.5655 0.56548059 2532 Q8CFX3 Pcdh1 no no 0 0 0 0 8 0 1 62.036 62.036 2 0.0008628 19541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.806 44.687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11984 2532 11543 27996 32479 32479 1 LEVGTETIIDK Unmodified 1216.6551 0.65508346 2563 Q8JZK9;P54869 Hmgcs1;Hmgcs2 Hydroxymethylglutaryl-CoA synthase, cytoplasmic;Hydroxymethylglutaryl-CoA synthase, mitochondrial yes no 0 0 0 0 5 0 1 67.572 67.572 2 0.0086148 24206 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.518 10.395 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11985 2563 11544 27997 32480 32480 1 LEVIFADLAR Unmodified 1145.6445 0.64445919 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 9 0 1 89.102 89.102 2 0.008387 31486 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.893 19.546 16.899 17.505 30.353 21.807 22.843 36.658 16 18 30 22 24 35 1 1 1 1 1 1 6882.1 11986 3193 11545 27998 32481 32481 1 LEVLTNLANETNIPTVLR Unmodified 2009.1157 0.11570504 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 9.5 0.5 1 1 91.468 91.468 3 2.5053E-13 29789 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.83 94.024 20.195 38.006 0 0 0 48.848 19 37 0 0 0 47 1 1 0 0 0 2 12727 11987 3249 11546 27999;28000 32482;32483 32483 2 LEVQAEEER Unmodified 1101.5302 0.5302173 1208 Q3TUQ5;O35691 Pnn Pinin yes no 0 0 0 0 3 0 1 43.401 43.401 2 0.0047982 13479 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.622 39.494 24.585 18.558 0 25.139 0 24.518 23 19 0 23 0 23 1 1 0 1 0 1 6114.5 11988 1208 11547 28001 32484 32484 1 LEVTDDLEK Unmodified 1060.5288 0.52882031 1588 P49443;Q9EQE2 Ppm1a Protein phosphatase 1A yes no 0 0 0 0 4 0 1 61.827 61.827 3 0.011123 21782 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.539 28.097 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2104.2 11989 1588 11548 28002 32485 32485 1 LEWAVDDEEK Unmodified 1232.5561 0.55609769 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 5 0 1 66.5 66.5 2 3.603E-05 23701 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 100.48 59.288 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11990 814 11549 28003 32486 32486 1 LEWSPVHK Unmodified 994.52362 0.52361577 65 A0A0A6YX18;Q8BVE3 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 8.5 0.5 1 1 55.63 55.63 3 0.0031567 15748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.426 54.027 168.6 253.23 83.792 256.88 81.85 283.35 158 250 83 241 83 268 2 3 1 3 1 3 40597 11991 65 11550 28004;28005 32487;32488;32489 32489 3 LEYGDNAEK Unmodified 1037.4666 0.46655441 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 4 0 1 47.375 47.375 3 0.00067236 15005 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.601 60.037 39.283 26.341 47.994 0 0 39.442 37 28 46 0 0 37 1 1 1 0 0 1 2278.4 11992 2924 11551 28006 32490 32490 1 LEYSDFSIR Unmodified 1128.5451 0.54513908 1634 P56375 Acyp2 Acylphosphatase-2 yes yes 0 0 0 0 6 0 1 65.971 65.971 2 0.010479 22846 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.224 40.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11993 1634 11552 28007 32491 32491 1 LFACYNDGVINLLEK Deamidation (N) 1768.8706 0.87057232 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 1 0 0 9 0 1 90.174 90.174 3 0.0029413 31882 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.155 22.82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11994 2129 11553 28008 32492 32492 827 1 LFADAEEEQR Unmodified 1206.5517 0.55168102 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 6.6 3.26 1 2 1 1 53.402 53.402 2;3 7.3885E-07 17629 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.25 101.93 265.48 238.88 376.88 227.94 480.4 164.03 250 241 370 231 474 158 3 3 4 3 4 3 68688 11995 1554 11554 28009;28010;28011;28012;28013 32493;32494;32495;32496;32497 32495 5 LFADAEEEQRR Unmodified 1362.6528 0.65279205 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 13 0 1 44.716 44.716 3 0.00055078 13727 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.948 53.437 0 124.11 213.6 114.22 223.83 213.21 0 120 209 120 226 206 0 1 1 1 1 1 18976 11996 1554 11555 28014 32498 32498 1 LFADAGLVCITSFISPYTQDR Unmodified 2373.1675 0.16748262 2099 Q6NZM8;Q60967 Papss1 Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase yes no 0 0 0 0 10 0 1 101.92 101.92 3 0.0073633 33060 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.679 27.099 0 0 0 15.302 0 9.594 0 0 0 14 0 9 0 0 0 1 0 1 735.48 11997 2099 11556 28015 32499 32499 1 LFAIEIYR Unmodified 1023.5753 0.57531699 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 10 0 1 77.073 77.073 2 0.029732 23605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.485 43.972 39.474 0 38.135 38.168 0 39.442 37 0 37 37 0 37 1 0 1 1 0 1 4066.6 11998 178 11557 28016 32500 32500 1 LFALEPSLLPLFQYNGR Deamidation (N) 1978.0564 0.056399252 3181 Q9ER97;D3YW07;Q3USR6 Ngb Neuroglobin yes no 0 1 0 0 11 0 2 106.16 106.16 3 3.8178E-06 35224 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.39 91.472 9.6251 0 5.3615 0 9.414 18 9 0 5 0 9 18 1 0 1 0 1 1 3820.1 11999 3181 11558 28017;28018 32501;32502 32502 1099 2 LFALEPSLLPLFQYNGR Unmodified 1977.0724 0.072383667 3181 Q9ER97;D3YW07;Q3USR6 Ngb Neuroglobin yes no 0 0 0 0 12 0 1 103.1 103.1 3 0.0031461 28955 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 45.723 16.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12000 3181 11558 28019 32503 32503 1 LFAQLINNK Unmodified 1059.6077 0.60767975 2317 Q80UG2;P70207 Plxna4;Plxna2 Plexin-A4;Plexin-A2 yes no 0 0 0 0 1 0 1 75.389 75.389 3 0.006239 25960 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.8 11.976 39.522 0 30.097 0 0 49.036 37 0 28 0 0 46 1 0 1 0 0 1 4389 12001 2317 11559 28020 32504 32504 1 LFAWADPTGIR Unmodified 1245.6506 0.6506072 2475 Q8BX70;A0A1L1SS63 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 0 10 0 1 80.791 80.791 2 0.0017385 25444 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.615 43.112 69.343 0 67.501 55.65 81.633 76.555 65 0 65 56 83 74 1 0 1 1 1 1 4497.2 12002 2475 11560 28021 32505 32505 1 LFCLHPVK Unmodified 1012.5528 0.55280741 311 A0A1L1SV73;Q8BY87 Usp47 Ubiquitin carboxyl-terminal hydrolase 47 yes no 0 0 0 0 11.5 0.5 1 1 59.133 59.133 3 0.016537 15057 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.64 22.115 0 0 44.925 108.81 0 39.442 0 0 46 102 0 37 0 0 1 1 0 1 3953.9 12003 311 11561 28022;28023 32506;32507 32506 2 LFCVGFTK Unmodified 970.49462 0.49462383 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 6.5 5.5 1 1 73.64 73.64 3 0.052462 25370 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.082 29.646 0 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 9410.9 12004 1844 11562 28024;28025 32508;32509 32508 2 LFDATLTQYVK Unmodified 1297.6918 0.69180331 552 A3KMP2;D6RH59 Ttc38 Tetratricopeptide repeat protein 38 yes no 0 0 0 0 9 0 1 79.308 79.308 3 0.031989 27047 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.639 24.533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12005 552 11563 28026 32510 32510 1 LFDDGTLGISLDETVTEK Unmodified 1951.9626 0.96261803 2749 Q91W43 Gldc Glycine dehydrogenase (decarboxylating), mitochondrial yes yes 0 0 0 0 13 0 1 69.488 69.488 3 0.040499 25737 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.233 9.4301 69.745 0 0 71.045 0 0 65 0 0 65 0 0 1 0 0 1 0 0 7971.8 12006 2749 11564 28027 32511 32511 1 LFDDSDER Unmodified 995.4196 0.41960421 2375 Q8BGC0 Htatsf1 HIV Tat-specific factor 1 homolog yes yes 0 0 0 0 4 0 1 51.066 51.066 2 0.051677 16788 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.91 33.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12007 2375 11565 28028 32512 32512 1 LFDEVQEVIYCPAAVHNDLEK Unmodified 2488.1944 0.19442565 1932 Q3TMH2;A2AWQ9 Scrn3 Secernin-3 yes no 0 0 0 0 5 0 1 84.218 84.218 3 0.0066169 31986 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.248 19.793 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12008 1932 11566 28029 32513 32513 1 LFDFVNAK Unmodified 952.50182 0.5018177 531 A2AW05;Q08943 Ssrp1 FACT complex subunit SSRP1 yes no 0 0 0 0 10 0 1 77.116 77.116 2 0.051054 23614 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.21 30.6 69.42 64.479 0 68.963 110.67 66.132 65 65 0 65 111 65 1 1 0 1 1 1 3399.9 12009 531 11567 28030 32514 32514 1 LFDHPEVPTPPESASVSR Unmodified 1963.964 0.96395543 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 4 1 1 59.193 59.193 3 5.7748E-05 20519 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.648 50.209 59.428 93.375 93.898 18.534 0 108.73 56 93 93 19 0 102 1 2 2 1 0 1 16513 12010 1412 11568 28031;28032 32515;32516 32515 2 LFDIFSQQVATVIQSR Unmodified 1850.989 0.98904797 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 6.25 5.26 2 1 1 99.138 99.138 3 3.2944E-68 28163 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 204.67 183.72 105.74 82.269 7.1406 32.672 38.785 109.76 102 83 7 32 39 104 5 3 1 4 4 5 93062 12011 3174 11569 28033;28034;28035;28036 32517;32518;32519;32520;32521;32522;32523;32524;32525;32526 32525 10 LFDSICNNK Unmodified 1109.5175 0.51754412 1330;622;3136 B2RSH2;P08752;Q9DC51 Gnai1;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 10 2.16 1 1 1 63.077 63.077 2;3 0.00013314 20142 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.27 80.253 235.3 353.17 264.61 312.08 351.19 335.36 222 351 269 306 356 324 2 3 2 3 2 2 60692 12012 622;1330;3136 11570 28037;28038;28039 32527;32528;32529 32527 3 LFDVGGQR Unmodified 890.46102 0.46101552 1411 P18872;D3Z2M7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 9.25 2.28 1 1 1 1 56.427 56.427 2 0.00026608 16973 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 156.4 85.023 2426.6 1553.6 2563.5 3056.8 2936.8 3261.3 2283 1599 2576 2987 3049 3138 4 3 3 4 4 4 543400 12013 1411 11571 28040;28041;28042;28043 32530;32531;32532;32533 32531 4 LFEASVETGDR Unmodified 1222.583 0.58298115 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 6 0 1 57.844 57.844 2 0.0022063 19066 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.01 29.009 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12014 2904 11572 28044 32534 32534 1 LFEELGK Unmodified 834.44872 0.4487195 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 9.33 2.62 1 1 1 69.18 69.18 2 0.0062063 23736 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.09 42.42 655.46 424.32 747.15 750.19 982.01 585.62 617 441 748 744 991 567 3 2 3 3 3 2 64267 12015 1957 11573 28045;28046;28047 32535;32536;32537 32535 3 LFEEPEDPSNR Unmodified 1331.5994 0.59935949 2211 Q6P1F6;Q9CWU3 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B no no 0 0 0 0 3.5 0.5 1 1 56.07 56.07 2 1.1184E-13 19125 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 154.01 117.62 20.19 39.071 68.759 35.272 76.83 0 19 38 65 37 75 0 1 1 1 1 2 0 15126 12016 2211 11574 28048;28049 32538;32539 32539 2 LFEETGHEDPITK Unmodified 1514.7253 0.72528829 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 5 0 1 57.782 57.782 3 0.00016131 19647 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.622 50.241 39.413 0 48.376 26.877 44.875 58.415 37 0 46 28 46 56 1 0 1 1 1 1 5717.7 12017 2490 11575 28050 32540 32540 1 LFEFAGYDVLR Unmodified 1328.6765 0.6764876 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9 0 1 86.015 86.015 2 0.0060202 30031 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.654 40.698 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3937.9 12018 3025 11576 28051 32541 32541 1 LFEGNALLR Unmodified 1031.5764 0.57637963 2268 Q6ZWN5;F7CJS8;D3YWH9;Q9CXW7 Rps9 40S ribosomal protein S9 yes no 0 0 0 0 9 0 1 68.285 68.285 2 0.0077485 21829 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.379 39.445 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12019 2268 11577 28052 32542 32542 1 LFEISDVVVK Unmodified 1147.6489 0.64887587 3329 Q9WUA2 Farsb Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 8 0 1 81.244 81.244 2 4.3416E-05 28625 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.31 79.967 0 0 23.585 29.198 0 29.848 0 0 23 28 0 28 0 0 1 1 0 1 5130 12020 3329 11578 28053 32543 32543 1 LFEMAYK Unmodified 900.44153 0.44152563 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 9 0 1 70.446 70.446 3 0.036613 22841 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.408 21.288 0 0 0 70.232 43.248 47.802 0 0 0 65 46 46 0 0 0 1 1 1 3270.3 12021 1533 11579 28054 32544 32544 1 LFENQLSGPESIVNIGDVLFTGTADGR Unmodified 2848.4243 0.42430225 3081 Q9D7N9 Apmap Adipocyte plasma membrane-associated protein yes yes 0 0 0 0 9.33 2.62 1 1 1 103.73 103.73 3 5.1437E-07 36301 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.888 36.7 0 0 0 30.604 0 25.254 0 0 0 28 0 24 0 0 0 1 0 2 2936.2 12022 3081 11580 28055;28056;28057 32545;32546;32547 32546 3 LFEQILK Unmodified 889.5273 0.52730417 2468;2779 Q8BW96;Q91YS8 Camk1d;Camk1 Calcium/calmodulin-dependent protein kinase type 1D;Calcium/calmodulin-dependent protein kinase type 1 no no 0 0 0 0 9.5 0.5 1 1 75.574 75.574 2 0.024299 22929 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.99 22.956 306.99 98.185 258.19 109.24 153.03 359.14 288 102 250 111 159 341 2 1 2 1 1 2 41770 12023 2468;2779 11581 28058;28059 32548;32549 32549 2 LFEVGGSPANTR Unmodified 1246.6306 0.63060004 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 9.5 2.57 2 1 1 2 57.444 57.444 2;3 1.954E-32 17399 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 184.36 127.26 630.17 500.03 778.43 393.04 468.38 586.98 593 509 759 380 463 558 6 6 6 5 4 5 384310 12024 811;1786 11582 28060;28061;28062;28063;28064;28065 32550;32551;32552;32553;32554;32555;32556;32557 32553 8 LFEVGGSPANTR Deamidation (N) 1247.6146 0.61461563 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 1 0 0 7 0 1 60.214 60.214 2 0.016879 19411 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.03 42.856 29.952 18.196 0 20.075 36.791 28.798 28 19 0 19 37 28 1 1 0 1 1 1 1880.8 12025 811;1786 11582 28066 32558 32558 214 1 LFEVIETEK Unmodified 1106.5859 0.58594126 351;167;2557 E9Q9N6;E9PYX3;A0A0R4J227;A0A0R4J0B1;Q3T9A3;F6ZS70;E9QMP6;Q05512;A0A0A6YY78;E9Q2J6;Q03141;A0A1Y7VNZ6;Q8CIP4 Mark2;Mark1;Mark3;Mark4 Serine/threonine-protein kinase MARK2;MAP/microtubule affinity-regulating kinase 3;MAP/microtubule affinity-regulating kinase 4 no no 0 0 0 0 6.5 0.5 1 1 75.432 75.432 2 0.001615 26393 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.02 52.148 59.701 103.13 82.337 46.312 94.182 28.204 56 102 84 46 93 28 1 2 2 1 2 1 5140.8 12026 167;351;2557 11583 28067;28068 32559;32560 32560 2 LFEVPDPNKPQK Unmodified 1410.7507 0.75071518 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 1 8 0 1 61.741 61.741 3 0.013351 19414 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.237 36.358 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12027 281 11584 28069 32561 32561 1 LFEYGGFPPEANYLFLGDYVDR Unmodified 2581.2165 0.2165413 1711 P62141 Ppp1cb Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes yes 0 0 0 0 8 0 1 101.61 101.61 3 7.5306E-07 35934 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.744 50.338 7.4814 5.8795 0 0 4.184 0 7 6 0 0 4 0 1 1 0 0 1 0 1437.6 12028 1711 11585 28070 32562 32562 1 LFEYGGFPPESNYLFLGDYVDR Unmodified 2597.2115 0.21145592 1710;1770 P62137;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 9 2.35 1 2 1 99.373 99.373 3 7.2198E-07 36356 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.814 44.886 12.876 0 50.135 30.81 43.116 44.254 12 0 47 32 42 43 2 0 2 4 3 3 9215.4 12029 1710;1770 11586 28071;28072;28073;28074 32563;32564;32565;32566;32567;32568;32569;32570;32571 32564 9 LFEYILLYK Unmodified 1200.6794 0.67944771 2870 Q99M71 Epdr1 Mammalian ependymin-related protein 1 yes yes 0 0 0 0 11.4 1.02 1 2 1 1 96.739 96.739 2;3 0.0013125 27675 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.56 76.448 60.088 19.8 43.857 42.444 76.491 20.254 56 19 44 41 74 19 2 1 2 2 2 1 26996 12030 2870 11587 28075;28076;28077;28078;28079 32572;32573;32574;32575;32576 32575 5 LFFAGAR Unmodified 780.42826 0.42825883 3269 Q9QXW9 Slc7a8 Large neutral amino acids transporter small subunit 2 yes yes 0 0 0 0 12 0 1 62.321 62.321 2 0.0016967 15033 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 154.91 120.02 466.57 231.44 376.13 397.52 278.35 500.54 438 253 379 389 300 477 1 1 1 1 1 1 49858 12031 3269 11588 28080 32577 32577 1 LFFLPAQPLWNNR Deamidation (N) 1615.8511 0.85109792 2130 Q61550 Rad21 Double-strand-break repair protein rad21 homolog yes yes 0 1 0 0 12 0 1 96.938 96.938 3 0.0072373 27725 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.528 37.274 5.365 0 0 0 14.644 0 5 0 0 0 14 0 1 0 0 0 1 0 550.13 12032 2130 11589 28081 32578 32578 832 1 LFFLQVK Unmodified 893.53747 0.53747492 1451;1452;1453 P26043;Q7TSG6;P26041;P26040 Rdx;Msn;Ezr Radixin;Moesin;Ezrin no no 0 0 0 0 1 0 1 83.127 83.127 2 0.020711 29132 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.29 70.09 56.223 64.466 54.003 54.71 0 62.894 53 65 56 53 0 59 1 1 1 1 0 1 8240.2 12033 1453;1452;1451 11590 28082 32579 32579 1 LFFPVIYDVK Unmodified 1239.6903 0.69034675 1930 Q3TLK9;Q60809 Cnot7 CCR4-NOT transcription complex subunit 7 yes no 0 0 0 0 11.5 0.5 1 1 92.077 92.077 2 0.001205 26322 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.062 59.842 29.782 47.514 29.083 24.046 0 26.65 28 47 28 22 0 25 1 2 1 1 0 1 4208.5 12034 1930 11591 28083;28084 32580;32581 32581 2 LFFQPYQAGLSK Unmodified 1397.7343 0.73433683 2704 Q8VE47 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 0 8 4.97 1 1 1 77.386 77.386 2;3 9.9784E-08 23304 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.27 78.003 49.313 8.9279 152.39 47.832 58.576 59.696 46 9 149 47 56 56 2 1 2 2 1 2 44545 12035 2704 11592 28085;28086;28087 32582;32583;32584;32585 32583 4 LFFTTANAHFK Unmodified 1295.6663 0.66625727 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 1 0 1 66.359 66.359 3 0.010994 22270 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.5 25.119 29.904 27.776 0 29.725 46.751 0 28 28 0 28 46 0 1 1 0 1 1 0 4627.4 12036 570 11593 28088 32586 32586 1 LFFVGSR Unmodified 824.45447 0.45447358 3369 Q9Z127;Q8BGK6 Slc7a5;Slc7a6 Large neutral amino acids transporter small subunit 1;Y+L amino acid transporter 2 yes no 0 0 0 0 1 0 1 67.532 67.532 2 0.029712 22688 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.512 59.45 39.516 36.703 0 50.278 0 39.442 37 37 0 46 0 37 1 1 0 1 0 1 10259 12037 3369 11594 28089 32587 32587 1 LFFWMQEPK Unmodified 1224.6002 0.60015154 53 Q9JKV1;A0A0A6YVU8 Adrm1;Gm9774 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 0 12 0 1 88.465 88.465 2 0.0005642 25169 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.52 91.443 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 3279.6 12038 53 11595 28090 32588 32588 1 LFGAAEVQR Unmodified 989.52943 0.52942943 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.14 1.81 1 2 2 1 1 54.735 54.735 2;3 0.00040547 15433 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.668 59.193 1026.3 1025.9 1478.4 1201.5 1025.8 1500.4 967 1052 1476 1199 1056 1435 4 5 6 6 4 6 250350 12039 551 11596 28091;28092;28093;28094;28095;28096;28097 32589;32590;32591;32592;32593;32594;32595;32596 32594 8 LFGAGGGK Unmodified 705.38097 0.38097428 3091 Q9D8B3 Chmp4b Charged multivesicular body protein 4b yes yes 0 0 0 0 11 0 1 53.065 53.065 2 0.012606 12800 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.734 42.309 118.48 0 104.2 124.95 0 0 111 0 102 120 0 0 1 0 1 1 0 0 17581 12040 3091 11597 28098 32597 32597 1 LFGALTPLEPR Unmodified 1212.6867 0.68665836 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 10 0 1 78.86 78.86 2 0.012058 24485 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.645 29.391 0 38.394 58.288 0 0 59.696 0 37 56 0 0 56 0 1 1 0 0 1 3436.1 12041 1220 11598 28099 32598 32598 1 LFGGFNSSDTVTSPQR Unmodified 1711.8166 0.81656291 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 9 0 1 65.671 65.671 3 6.73E-06 20588 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.488 66.019 0 0 0 69.883 61.802 86.714 0 0 0 65 65 83 0 0 0 1 1 1 5074.6 12042 1048 11599 28100 32599 32599 1 LFGGQIMGQALVAAAK Unmodified 1573.865 0.86503343 1650 Q8BZR4;P58137 Acot8 Acyl-coenzyme A thioesterase 8 yes no 0 0 0 0 12 0 1 84.093 84.093 3 0.00045009 23362 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.599 30.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12043 1650 11600 28101 32600 32600 1 LFGGSFTHQASVAK Unmodified 1448.7412 0.74121312 1288 O89023 Tpp1 Tripeptidyl-peptidase 1 yes yes 0 0 0 0 10.5 0.5 1 1 56.785 56.785 3;4 3.2016E-05 14227 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.69 65.616 0 88.312 154.37 278.82 319.1 203.85 0 83 148 269 324 195 0 1 1 2 2 1 24704 12044 1288 11601 28102;28103 32601;32602 32602 2 LFGIESSSGTILWK Unmodified 1536.8188 0.81879474 2509 Z4YJW0;Q8C7X2 Emc1 ER membrane protein complex subunit 1 yes no 0 0 0 0 11 0 1 86.246 86.246 3 0.00472 27321 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.659 22.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1473.9 12045 2509 11602 28104 32603 32603 1 LFGLGASLLTQASTLMSVQPEADTQGQPSPSK Unmodified 3258.6442 0.64420778 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 12 0 2 104.19 104.19 4;5 1.7305E-09 29081 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.046 39.527 9.5833 8.8176 6.7097 9.3074 6.8945 5.33 9 9 7 9 7 5 1 2 1 1 1 1 3299.9 12046 1275 11603 28105;28106 32604;32605 32604 2 LFGLLVK Unmodified 788.51601 0.5160112 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 4 5.2 3 1 84.443 84.443 2;3 0.0060976 31592 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.79 13.473 1767.5 1084.6 1512.8 1427.1 1273.5 1093.1 1660 1112 1505 1403 1277 1041 13 10 11 14 10 10 176740 12047 1554 11604 28107;28108;28109;28110 32606;32607;32608;32609;32610;32611;32612;32613;32614;32615;32616;32617;32618;32619;32620;32621 32616 16 LFGLSPFEPWTTK Unmodified 1521.7868 0.78676633 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 11.8 0.829 2 1 1 92.758 92.758 2;3 7.8631E-05 26600 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.522 58.324 173.09 80.96 103.75 106.49 61.988 186.08 167 84 102 102 65 176 2 2 2 3 2 2 20424 12048 141 11605 28111;28112;28113;28114 32622;32623;32624;32625;32626 32625 5 LFGMVLGSAPYTVPLPK Unmodified 1788.9848 0.98481421 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 3.4 4.8 4 1 96.175 96.175 3;4 2.081E-06 33689 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.358 57.945 29.708 79.878 108.97 36.681 78.518 66.559 28 78 106 36 77 63 4 7 7 5 6 5 17932 12049 2517 11606 28115;28116;28117;28118;28119 32627;32628;32629;32630;32631;32632;32633;32634;32635 32633 9 LFGMVLGSAPYTVPLPK Oxidation (M) 1804.9797 0.97972884 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 1 0 12 0 1 88.266 88.266 3 0.00043199 25127 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.831 39.508 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 1342.6 12050 2517 11606 28120 32636 32636 175 1 LFGPYVWGR Unmodified 1093.5709 0.57090032 2686 Q8VCT3 Rnpep Aminopeptidase B yes yes 0 0 0 0 6.5 5.5 1 1 78.2 78.2 2 0.0088493 21089 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.847 39.201 188.28 0 95.871 212.55 250.14 101.09 176 0 93 204 250 97 3 0 2 3 2 2 29203 12051 2686 11607 28121;28122 32637;32638;32639 32639 3 LFGTFGVISSVR Unmodified 1281.7081 0.70812208 2436 Q8BN59 Larp6 La-related protein 6 yes yes 0 0 0 0 1 0 1 81.145 81.145 2 0.0036548 28272 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.463 24.225 19.976 37.397 37.351 7.6109 0 0 19 37 37 9 0 0 1 1 1 1 0 0 1144 12052 2436 11608 28123 32640 32640 1 LFGYQPTIYYPK Unmodified 1488.7653 0.76530261 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 0 8.5 4.39 1 1 1 1 78.493 78.493 3 4.3251E-05 23813 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.338 60.011 177.5 59.584 285.2 150.24 301.27 214.08 166 56 264 139 297 205 2 1 3 2 3 3 138270 12053 2617 11609 28124;28125;28126;28127 32641;32642;32643;32644;32645;32646 32643 6 LFHPHQEPAK Unmodified 1202.6196 0.61964142 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9 Itsn1 Intersectin-1 yes no 0 0 0 0 8 0 1 39.796 39.796 4 0.023935 9087 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.512 18.721 128.45 60.498 0 0 111.82 124.73 120 65 0 0 111 120 1 1 0 0 1 1 3108 12054 876 11610 28128 32647 32647 1 LFHPLEQSIWAVK Unmodified 1566.8558 0.85584895 198 A0A0R4J150;B9EJ86 Osbpl8 Oxysterol-binding protein yes no 0 0 0 0 10 0 1 77.688 77.688 3 0.047274 23890 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.268 11.282 39.564 27.124 0 60.158 55.813 0 37 28 0 56 56 0 1 1 0 1 1 0 1391.2 12055 198 11611 28129 32648 32648 1 LFIATAVDGKPEYFPTISSR Unmodified 2211.1576 0.15756986 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 1 10.5 0.5 1 1 78.901 78.901 3 0.00069402 24077 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.358 40.828 0 0 0 39.581 45.705 47.732 0 0 0 37 47 46 0 0 0 1 1 1 3613.2 12056 2317 11612 28130;28131 32649;32650 32650 2 LFIFETFCR Unmodified 1231.606 0.6059652 1667 P60229 Eif3e Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 0 12 0 1 87.499 87.499 2 0.010724 24698 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.486 50.331 59.046 82.573 105.11 0 0 49.036 56 83 102 0 0 46 1 1 1 0 0 1 8279 12057 1667 11613 28132 32651 32651 1 LFIGGLNTETNEK Unmodified 1434.7355 0.73545904 385;3339 A0A2I3BRL8;Q91VM5;A0A2I3BQC0;Q9WV02;A2AFI3;A2AFI4 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 10 2.16 1 1 1 69.858 69.858 2;3 4.3053E-14 23295 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.42 85.137 28 38.781 35.103 58.47 34.366 48.055 28 37 37 56 37 46 1 1 1 1 1 1 7444 12058 385;3339 11614 28133;28134;28135 32652;32653;32654 32652 3 LFIGGLNVQTSESGLR Unmodified 1689.905 0.90498399 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 10.8 0.748 2 2 1 75.503 75.503 2;3 1.6053E-32 22433 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 148.89 114.93 207.38 118.01 244.62 68.793 367.91 248.67 195 120 232 74 362 241 4 3 3 2 5 4 68672 12059 2985 11615 28136;28137;28138;28139;28140 32655;32656;32657;32658;32659;32660 32659 6 LFIGGLPNYLNDDQVK Unmodified 1804.9359 0.93594977 1457 Q3KQM4;Q80XR5;P26369 U2af2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 10 0 1 85.825 85.825 3 1.9438E-05 27463 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.908 53.951 0 48.944 0 20.234 28.359 0 0 46 0 19 28 0 0 1 0 1 1 0 5223.8 12060 1457 11616 28141 32661 32661 1 LFIGGLSFETTDDSLR Unmodified 1769.8836 0.88357984 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 10 1.87 1 1 1 1 87.193 87.193 3 2.8647E-17 30600 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.68 101.35 40.679 18.848 58.096 56.027 119.68 183.42 38 19 56 56 121 177 2 1 2 2 3 5 23919 12061 626;486 11617 28142;28143;28144;28145 32662;32663;32664;32665;32666 32663 5 LFIGGLSFETTDDSLREHFEK Unmodified 2440.1911 0.19105483 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 1 8.5 0.5 1 1 78.776 78.776 4 1.1403E-08 27436 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.953 50.415 207.18 249.8 133.18 215.03 0 236.65 195 250 139 204 0 222 3 3 2 3 0 3 17289 12062 626;486 11618 28146;28147 32667;32668;32669 32667 3 LFIGGLSFETTDESLR Unmodified 1783.8992 0.89922991 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 9.75 1.92 1 2 1 86.325 86.325 2;3 6.2464E-25 30169 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.07 122.23 39.701 48.216 68.759 115.32 101.49 95.425 37 47 65 111 102 93 1 2 1 3 2 3 24678 12063 1586 11619 28148;28149;28150;28151 32670;32671;32672;32673;32674 32671 5 LFIGGLSFETTEESLR Unmodified 1797.9149 0.91487997 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 10.3 2.13 2 1 1 2 86.374 86.374 2;3 2.2061E-16 33888 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.82 100.43 89.782 29.681 65.455 89.115 53.97 88.004 84 28 64 83 56 84 3 1 3 3 2 3 50258 12064 1271 11620 28152;28153;28154;28155;28156;28157 32675;32676;32677;32678;32679;32680;32681 32681 7 LFIGMVSK Unmodified 893.50446 0.50446024 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2L5;S4R2S7 Celf2 CUGBP Elav-like family member 2 yes no 0 0 0 0 1 0 1 75.02 75.02 2 0.0060014 25877 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.81 48.81 80.124 0 58.981 27.089 0 0 75 0 56 28 0 0 1 0 1 1 0 0 4697.3 12065 220 11621 28158 32682 32682 1 LFILTEAR Unmodified 961.55967 0.55966693 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10 0 1 72.536 72.536 2 0.011746 21765 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.187 58.449 0 59.584 0 0 48.116 0 0 56 0 0 46 0 0 1 0 0 1 0 5141.7 12066 2459 11622 28159 32683 32683 1 LFILTPLTY Unmodified 1079.6267 0.62668386 170 A0A0R4J0D5;Q6PDG8 Mon1a Vacuolar fusion protein MON1 homolog A yes no 0 0 0 0 4.67 5.19 2 1 107.44 107.44 2 0.003584 34534 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.903 66.108 27.957 12.823 0 0 0 6.396 27 13 0 0 0 6 5 2 0 0 0 1 9821.1 12067 170 11623 28160;28161;28162 32684;32685;32686;32687;32688 32684 5 LFIMYGK Unmodified 870.46735 0.46734645 2476 Q8BX94 Osbpl2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 0 1 0 1 75.376 75.376 2 0.0098617 26005 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 123.34 78.889 0 0 48.608 26.134 83.649 57.309 0 0 46 28 83 56 0 0 1 1 1 1 2814.9 12068 2476 11624 28163 32689 32689 1 LFINNEWHDAVSK Unmodified 1571.7732 0.77324153 3009 Q9CZS1;G3UYH1 Aldh1b1 Aldehyde dehydrogenase X, mitochondrial yes no 0 0 0 0 7 0 1 66.216 66.216 3 0.028161 22132 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.629 19.952 29.469 36.279 65.94 46.348 0 0 28 37 65 46 0 0 1 1 1 1 0 0 1470.2 12069 3009 11625 28164 32690 32690 1 LFIQSLEGLLPR Unmodified 1384.8078 0.80783613 314 A0A1N9M5I8;Q3UGY8 Arfgef3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes no 0 0 0 0 4.67 5.19 2 1 98.037 98.037 2 2.1897E-05 27750 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.04 77.889 11.134 14.896 1.9662 4.1994 2.9451 14.924 11 14 2 4 3 14 2 1 1 1 1 1 2999.5 12070 314 11626 28165;28166;28167 32691;32692;32693;32694 32694 4 LFISGLPFSCTK Unmodified 1368.7112 0.71115855 3242 Q9JLI8 Sart3 Squamous cell carcinoma antigen recognized by T-cells 3 yes yes 0 0 0 0 1 0 1 84.956 84.956 2 0.00091463 30004 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.349 31.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12071 3242 11627 28168 32695 32695 1 LFIVDAR Unmodified 832.48069 0.48068833 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 10 0 1 65.504 65.504 2 0.037494 18334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.294 28.02 38.987 55.739 72.724 85.368 112.18 0 37 56 74 84 111 0 1 1 1 1 1 0 18151 12072 3000 11628 28169 32696 32696 1 LFIVGSNSSSSTR Unmodified 1353.6888 0.6888432 1177 O09172;F6VNW5;H3BJA3 Gclm Glutamate--cysteine ligase regulatory subunit yes no 0 0 0 0 11 0 1 59.17 59.17 2 0.00010365 15268 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.28 59.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10214 12073 1177 11629 28170 32697 32697 1 LFIYNPSSGEFLGR Unmodified 1598.8093 0.80929269 1846 P97370 Atp1b3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 80.898 80.898 2;3 0.00018441 24967 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.834 43.285 68.33 56.418 26.736 80.382 0 0 66 56 28 75 0 0 3 2 1 2 0 0 26883 12074 1846 11630 28171;28172;28173;28174 32698;32699;32700;32701 32699 4 LFKPHQAPAR Unmodified 1163.6564 0.65636128 2756 Q91WK2 Eif3h Eukaryotic translation initiation factor 3 subunit H yes yes 0 0 0 1 12 0 1 37.836 37.836 4 1.7388E-05 5769 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.14 80.326 123.23 105.69 118.44 99.586 141.17 142.01 116 109 120 100 144 137 1 1 1 1 1 1 10231 12075 2756 11631 28175 32702 32702 1 LFLAGYELTPTMR Unmodified 1510.7854 0.78538612 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 11.5 0.5 1 1 82.891 82.891 2;3 4.8553E-21 25977 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 158.47 98.714 0 63.243 35.694 82.284 102.91 0 0 60 37 79 102 0 0 2 1 2 2 0 9070.8 12076 2485 11632 28176;28177 32703;32704 32703 2 LFLAPLPCTEFSLGQQLLR Unmodified 2202.1871 0.18709585 29 Q8BXK8;A0A087WRF2;E9Q3K3 Agap1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 0 11.7 0.471 1 2 99.08 99.08 3;4 2.3262E-08 28254 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.638 62.938 0 0 0 35.289 5.6557 24.357 0 0 0 34 6 23 0 0 0 3 1 2 9599.8 12077 29 11633 28178;28179;28180 32705;32706;32707 32706 3 LFLAPLPSSDVPLGQQLLR Unmodified 2063.1779 0.17791137 1034 F8VQE9;Q8VHH5;A0A0G2JER6 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 10 0 1 93.845 93.845 3 0.03492 30605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 31.514 20.041 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 3124.7 12078 1034 11634 28181 32708 32708 1 LFLASLAAAGSGTDAQVALVNEVK Unmodified 2344.2638 0.26382585 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 12 0 1 93.024 93.024 4 0.0067218 26604 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.665 11.012 29.945 19.571 0 0 0 20.254 28 19 0 0 0 19 2 1 0 0 0 1 1567.4 12079 459 11635 28182 32709;32710 32710 2 LFLCSICFCEK Unmodified 1475.6611 0.66111359 3208 Q9JI90;G3XA54 Rnf14 E3 ubiquitin-protein ligase RNF14 yes no 0 0 0 0 11 0 1 82.268 82.268 2 0.0033632 25711 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.614 53.749 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 1598.9 12080 3208 11636 28183 32711 32711 1 LFLEGFR Unmodified 880.48069 0.48068833 1085 G3X9K3;D3YYK9 Arfgef1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 yes no 0 0 0 0 10 0 1 73.61 73.61 2 0.055864 22178 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.355 31.502 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12081 1085 11637 28184 32712 32712 1 LFLELEPQVR Unmodified 1242.6972 0.69722304 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7;B1ATU4 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 9 0 1 78.066 78.066 3 0.0092583 26398 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.49 31.588 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1731.3 12082 1066 11638 28185 32713 32713 1 LFLEYTDSSYEEK Unmodified 1622.7352 0.73518427 696 D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YZ29 Gstm7 Glutathione S-transferase Mu 7 yes no 0 0 0 0 6 0 1 75.252 75.252 3 0.0077241 27232 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.532 19.235 0 59.584 0 0 56.948 47.411 0 56 0 0 56 46 0 1 0 0 1 1 3509.3 12083 696 11639 28186 32714 32714 1 LFLFHTSLPIAEAPGK Unmodified 1739.961 0.9610423 366 G3X972;A0A286YDI8;A0A286YD08 Sec24c yes no 0 0 0 0 12 0 2 79.467 79.467 3;4 2.5844E-09 21505 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.214 66.636 0 77.933 48.033 40.441 0 49.036 0 74 46 37 0 46 0 2 1 1 0 1 5189.7 12084 366 11640 28187;28188 32715;32716;32717 32717 3 LFLGPYK Unmodified 836.47963 0.47962569 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 1 0 1 70.95 70.95 2 0.017943 24025 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.88 15.212 87.249 57.769 74.895 77.018 84.362 90.335 82 61 76 76 87 87 1 1 1 1 1 1 9539.5 12085 3176 11641 28189 32718 32718 1 LFLIDFGLAK Unmodified 1135.6641 0.664132 834 H7BXB1;E9Q4G7;E9PWB2;Q8BK63 Csnk1a1 Casein kinase I isoform alpha yes no 0 0 0 0 12 0 1 95.912 95.912 2 3.3767E-05 27472 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.52 62.08 9.612 8.9279 0 5.465 0 0 9 9 0 5 0 0 1 1 0 1 0 0 943.99 12086 834 11642 28190 32719 32719 1 LFLLINSGDAR Unmodified 1217.6768 0.67682195 702 D3YWB9;Q99P47 Cntnap4 Contactin-associated protein-like 4 yes no 0 0 0 0 12 0 1 80.043 80.043 2 0.0062848 21759 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.04 27.845 20.207 0 30.194 0 19.874 0 19 0 28 0 19 0 1 0 1 0 1 0 2494.2 12087 702 11643 28191 32720 32720 1 LFLLPHK Unmodified 866.53781 0.53780928 531 A2AW05;Q08943 Ssrp1 FACT complex subunit SSRP1 yes no 0 0 0 0 12 0 1 65.626 65.626 3 0.053808 16148 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.907 23.571 60.088 0 0 70.201 44.891 0 56 0 0 65 46 0 1 0 0 1 1 0 3707.4 12088 531 11644 28192 32721 32721 1 LFLPLYVYSLENPDK Unmodified 1809.9553 0.95528822 1131 H7BXB6;Z4YLG3;Q80U30 Clec16a Protein CLEC16A yes no 0 0 0 0 11.5 0.5 1 1 98.199 98.199 3 0.0004838 32258 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.185 42.232 29.817 0 38.184 38.165 0 0 28 0 37 37 0 0 1 0 1 1 0 0 2375.4 12089 1131 11645 28193;28194 32722;32723 32722 2 LFLQFTTGTDR Unmodified 1297.6667 0.6666512 1165 O08759;A0A0J9YVG1;A0A0J9YUY4 Ube3a Ubiquitin-protein ligase E3A yes no 0 0 0 0 11 0 1 76.326 76.326 2 0.0016249 22895 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.355 48.661 39.701 0 0 30.604 0 0 37 0 0 28 0 0 1 0 0 1 0 0 10358 12090 1165 11646 28195 32724 32724 1 LFLQGPK Unmodified 801.47487 0.47487467 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 11.5 0.5 1 1 63.465 63.465 2;3 0.00283 15462 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.54 71.539 78.387 77.009 302.35 0 97.824 105.94 74 79 299 0 97 102 1 1 2 0 1 1 58305 12091 974 11647 28196;28197 32725;32726 32726 2 LFLQNNLIR Unmodified 1129.6608 0.66077796 522 A2ATS6;Q7M6Z0 Rtn4rl2 Reticulon-4 receptor-like 2 yes no 0 0 0 0 6.5 5.5 1 1 71.591 71.591 2 0.0070584 18196 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.485 30.376 49.128 45.631 0 60.158 55.813 0 46 46 0 56 56 0 1 1 0 1 1 0 2827.5 12092 522 11648 28198;28199 32727;32728 32728 2 LFLTMEINPK Unmodified 1204.6526 0.65258104 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 80.888 80.888 3 0.0069846 25394 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.567 29.908 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 2803.3 12093 3204 11649 28200 32729 32729 1 LFLVGLPLFGKEDSDALVR Unmodified 2088.1619 0.16192696 1314 P05532 Kit Mast/stem cell growth factor receptor Kit yes yes 0 0 0 1 12 0 1 95.149 95.149 4 0.013244 27296 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.417 24.163 0 0 29.02 28.633 12.829 14.558 0 0 28 28 14 14 0 0 1 1 1 1 443.36 12094 1314 11650 28201 32730 32730 1 LFLVNNK Unmodified 846.49634 0.49633839 1995 Q3UM45;A0A087WRA7 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 0 8.75 4.49 1 2 1 65.208 65.208 2;3 0.020711 17882 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.29 31.437 0 125.64 267.68 153.1 0 167.36 0 120 259 148 0 157 0 1 2 2 0 2 77638 12095 1995 11651 28202;28203;28204;28205 32731;32732;32733;32734 32733 4 LFLVQLQEK Unmodified 1116.6543 0.6542956 2926 Q9CQF3;A0A1D5RM23;A0A1D5RLT7;A0A1D5RLS2 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 0 11 0 2 78.142 78.142 2;3 3.1062E-05 23762 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 141.48 82.499 79.182 142.56 0 69.275 94.096 78.884 74 139 0 65 93 74 1 2 0 1 1 1 24312 12096 2926 11652 28206;28207 32735;32736 32736 2 LFLVQTVQQASK Unmodified 1360.7715 0.77145062 1801 P70202 Lxn Latexin yes yes 0 0 0 0 6.11 5.72 5 2 2 73.914 73.914 2;3;4 2.2234E-87 19069 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 233.13 165.93 522.12 510.77 555.18 554.74 742.44 475.56 491 511 551 538 742 457 8 9 9 9 10 7 307830 12097 1801 11653 28208;28209;28210;28211;28212;28213;28214;28215;28216 32737;32738;32739;32740;32741;32742;32743;32744;32745;32746;32747;32748;32749;32750 32747 14 LFLVQTVQQASKEDIPGR Unmodified 2028.1004 0.10038933 1801 P70202 Lxn Latexin yes yes 0 0 0 1 11 0 1 73.061 73.061 3 0.00014602 21405 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.46 42.809 48.785 25.25 74.903 76.418 0 0 46 28 74 74 0 0 1 1 1 1 0 0 11973 12098 1801 11654 28217 32751 32751 1 LFLYDLPEGK Unmodified 1193.6332 0.6332258 2297 Q7TT50 Cdc42bpb Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 0 9 0 1 80.147 80.147 3 0.0076933 27476 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.608 27.198 39.35 26.528 36.539 38.263 0 0 37 28 37 37 0 0 1 1 1 1 0 0 3882.3 12099 2297 11655 28218 32752 32752 1 LFNAIIHR Unmodified 982.57123 0.57123467 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 11.5 0.5 1 1 58.934 58.934 3 0.0017725 15084 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.28 101.28 39.34 26.5 38.246 83 36.028 77.856 37 28 37 83 37 74 1 1 1 1 1 1 36007 12100 3266 11656 28219;28220 32753;32754 32753 2 LFNGQQGIIIQNFSTR Deamidation (N) 1835.953 0.95299681 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 1 0 0 8.5 0.5 1 1 79.811 79.811 3 1.7969E-05 26929 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.562 61.38 59.76 65.13 0 90.719 0 59.696 56 65 0 83 0 56 1 1 0 2 0 1 10724 12101 415 11657 28221;28222 32755;32756 32756 111 2 LFNQINVA Unmodified 917.49707 0.49706667 1212 O35864 Cops5 COP9 signalosome complex subunit 5 yes yes 0 0 0 0 9 0 1 76.321 76.321 2 0.047201 25565 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.776 35.203 0 0 0 29.381 65.02 47.181 0 0 0 28 65 46 0 0 0 1 1 1 9507.4 12102 1212 11658 28223 32757 32757 1 LFNYMYSTAPR Unmodified 1361.6438 0.64380726 2806;2358 Q8BFP9;Q922H2 Pdk1;Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial;[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial no no 0 0 0 0 12 0 1 69.915 69.915 2 0.011088 17730 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.889 36.803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12103 2358;2806 11659 28224 32758 32758 1 LFPAGELLPPK Unmodified 1180.6856 0.68559572 3425 yes no 0 0 0 0 8.5 0.5 1 1 92.089 92.089 3 0.031478 32667 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.765 3.6732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 12104 3425 11660 28225;28226 32759;32760 32760 2 LFPAVFAQATSPNVFQFELGR Unmodified 2338.211 0.21100241 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 12 0 2 100.34 100.34 3;4 2.3987E-11 28509 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.343 88.555 9.5635 18.285 13.281 40.484 13.725 0 9 18 15 38 14 0 1 2 2 2 1 0 2752.5 12105 902 11661 28227;28228 32761;32762 32762 2 LFPDDPYKK Unmodified 1121.5757 0.57571092 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 1 8 0 1 59.684 59.684 3 0.01062 18437 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.297 34.824 0 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 9445.3 12106 1176 11662 28229 32763 32763 1 LFPGFDLETVK Unmodified 1264.6703 0.67033959 2104 Q61024 Asns Asparagine synthetase [glutamine-hydrolyzing] yes yes 0 0 0 0 10.5 2.5 1 1 85.88 85.88 3 0.00033626 33550 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.162 45.435 0 18 0 0 0 0 0 18 0 0 0 0 0 1 0 0 0 0 1836.4 12107 2104 11663 28230;28231 32764;32765 32765 2 LFPHCGR Unmodified 885.42794 0.42794125 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 38.307 38.307 2;3 0.0034678 10402 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.23 96.584 49.203 30.73 124.33 343.24 185.29 54.366 46 32 120 324 185 51 1 1 1 3 1 1 110190 12108 1606 11664 28232;28233;28234;28235 32766;32767;32768;32769 32769 4 LFPLIQAMHPSLAGK Unmodified 1621.9014 0.90141893 1484 P29341;F6ZAX1 Pabpc1 Polyadenylate-binding protein 1 yes no 0 0 0 0 1 0 1 81.795 81.795 3 0.0010341 28706 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.213 42.335 20.134 28.121 18.769 0 19.197 19.706 19 28 19 0 19 19 1 1 1 0 1 1 3054.3 12109 1484 11665 28236 32770 32770 1 LFPNADSK Unmodified 890.44978 0.44978213 1769 P63085;A0A338P736 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 9 0 1 56.36 56.36 2 0.020413 16162 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.043 24.007 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12110 1769 11666 28237 32771 32771 1 LFPPWIK Unmodified 899.52691 0.52691024 2891 Q99PV0;B7ZC27 Prpf8 Pre-mRNA-processing-splicing factor 8 yes no 0 0 0 0 1 0 1 82.669 82.669 3 0.0097742 28992 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.592 0 39.406 0 49.573 0 0 59.696 37 0 46 0 0 56 1 0 1 0 0 1 7613.6 12111 2891 11667 28238 32772 32772 1 LFPSGLDQK Unmodified 1003.5338 0.53384611 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 10 2.16 1 1 1 66.059 66.059 3 0.00019744 21525 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.57 37.75 264.98 223.53 360.98 139.55 189.9 195.67 250 223 353 139 186 185 3 2 3 2 2 2 75333 12112 1375 11668 28239;28240;28241 32773;32774;32775 32773 3 LFPVLLNNAR Unmodified 1155.6764 0.67642802 2723 Q8VI75 Ipo4 Importin-4 yes yes 0 0 0 0 1 0 1 77.309 77.309 2 0.0026673 26827 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.916 48.329 0 38.11 75.255 56.723 0 29.848 0 37 74 56 0 28 0 1 1 1 0 1 7504.3 12113 2723 11669 28242 32776 32776 1 LFPYSNYK Unmodified 1030.5124 0.51238239 20 A0A087WPX3;A0A087WR56;E9Q171;E9PW06 Nfasc yes no 0 0 0 0 12 0 1 65.828 65.828 2 0.012521 16174 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.046 44.599 0 69.16 0 29.902 37.328 0 0 65 0 28 37 0 0 1 0 1 1 0 3983.4 12114 20 11670 28243 32777 32777 1 LFQDLQDLFDPSR Unmodified 1592.7835 0.78347187 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 9 0 1 101.62 101.62 2 0.009647 36084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.551 31.675 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12115 62 11671 28244 32778 32778 1 LFQECCPHSTDR Unmodified 1548.6449 0.64494625 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 6 0 1 42.272 42.272 3 0.00017503 11750 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.744 73.581 29.856 37.355 0 30.104 26.577 38.684 28 37 0 28 28 37 1 1 0 1 1 1 4118.4 12116 613 11672 28245 32779 32779 1 LFQEDNGMPVHLK Unmodified 1526.7551 0.75514863 1583 P48771 Cox7a2 Cytochrome c oxidase subunit 7A2, mitochondrial yes yes 0 0 0 0 8 0 1 65.379 65.379 3 7.2874E-05 21110 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.766 65.133 128.56 40.275 0 61.208 0 69.29 120 46 0 56 0 65 1 1 0 1 0 1 6549 12117 1583 11673 28246 32780 32780 1 LFQEDNGMPVHLK Deamidation (N) 1527.7392 0.73916421 1583 P48771 Cox7a2 Cytochrome c oxidase subunit 7A2, mitochondrial yes yes 0 1 0 0 13 0 1 68.199 68.199 3 0.00033811 25108 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.498 65.626 187.11 92.33 214.24 0 148.07 196.18 176 102 204 0 148 188 1 1 1 0 1 1 11644 12118 1583 11673 28247 32781 32781 599 1 LFQGQLSGLYYDGLK Unmodified 1700.8774 0.87737225 889 E9Q2X2;Q6P9K9;A0A087WPQ9;E9Q3Q4;Q8C985 Nrxn3 Neurexin-3;Neurexin-3-beta;Neurexin-3-beta, soluble form;Neurexin-3-beta, C-terminal fragment yes no 0 0 0 0 9 0 1 83.412 83.412 3 0.00074488 28891 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.261 31.292 0 38.575 47.458 0 58.576 0 0 37 46 0 56 0 0 1 1 0 1 0 8983.7 12119 889 11674 28248 32782 32782 1 LFQIPQISYASTSAK Unmodified 1652.8774 0.87737225 1903;3283 Q14BI2;A0A0J9YVF0;Q9QYS2 Grm2;Grm3 Metabotropic glutamate receptor 2;Metabotropic glutamate receptor 3 no no 0 0 0 0 6 5 1 1 80.066 80.066 2;3 0.00035249 24575 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.291 52.425 69.03 102.25 33.484 27.759 65.038 48.813 65 101 37 28 65 47 2 2 1 1 2 1 8964.8 12120 1903;3283 11675 28249;28250 32783;32784 32784 2 LFQQIYSDGSDEVKR Unmodified 1783.8741 0.87407779 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 1 7 0 1 64.388 64.388 3 1.9915E-05 21265 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.97 79.648 0 38.257 66.463 35.281 63.723 77.066 0 37 65 37 65 74 0 1 1 1 1 1 5768.8 12121 2983 11676 28251 32785 32785 1 LFQSFSDALIDGDPQAALEELTK Unmodified 2507.2431 0.24314998 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 7 0 1 107.44 107.44 3 1.2053E-12 37489 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.352 48.2 5.3137 2.7284 6.3015 0 0 3.198 5 3 6 0 0 3 1 1 1 0 0 1 1135.3 12122 2983 11677 28252 32786 32786 1 LFQSVPIGQSVNLVLCR Unmodified 1929.0506 0.050602368 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1;A0A140LHL1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 11.5 0.5 1 1 86.473 86.473 3 5.2089E-07 27410 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.393 57.52 20.195 67.798 0 30.604 19.874 0 19 65 0 28 19 0 1 2 0 1 1 0 8450.1 12123 87 11678 28253;28254 32787;32788 32787 2 LFQVEYAIEAIK Unmodified 1422.7759 0.7758673 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 10.2 2.11 2 1 1 2 90.554 90.554 2;3 2.9375E-05 32087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.926 61.627 20.387 68.737 159.93 146.01 144.56 87.801 19 65 157 144 148 84 1 1 4 5 4 2 23540 12124 3400 11679 28255;28256;28257;28258;28259;28260 32789;32790;32791;32792;32793;32794 32791 6 LFSADPFDLEAQAK Unmodified 1550.7617 0.76167379 448 A2ADY9 Ddi2 Protein DDI1 homolog 2 yes yes 0 0 0 0 7 0 1 85.815 85.815 3 0.00017366 31375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.716 46.297 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2226.1 12125 448 11680 28261 32795 32795 1 LFSCEVDGKPEPR Unmodified 1532.7293 0.72932781 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 1 7 1 1 1 54.396 54.396 3 0.00032981 17481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.592 64.719 168.4 224.85 0 251.3 62.758 86.687 158 222 0 231 65 83 2 2 0 2 1 1 17314 12126 2077 11681 28262;28263 32796;32797 32796 2 LFSCGADGTLK Unmodified 1167.5594 0.55940893 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 9 0 1 63.633 63.633 2 2.9776E-05 19626 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.52 53.962 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 4346.2 12127 570 11682 28264 32798 32798 1 LFSFVTFESVGESK Unmodified 1575.7821 0.78207489 2820 Q924C1 Xpo5 Exportin-5 yes yes 0 0 0 0 10 0 1 89.974 89.974 3 0.021572 29244 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.961 18.711 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1254.5 12128 2820 11683 28265 32799 32799 1 LFSGLAHVK Unmodified 970.56 0.56000128 2846 Q99KP3 Cryl1 Lambda-crystallin homolog yes yes 0 0 0 0 11.5 0.5 1 1 59.933 59.933 3 0.00024679 14242 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.2 47.153 0 0 193.61 308.99 159.58 420.78 0 0 185 296 167 399 0 0 1 2 1 2 44954 12129 2846 11684 28266;28267 32800;32801 32801 2 LFSGSSHQDLSQK Unmodified 1432.6947 0.69465686 2505 Q8C5R8 Prps1l1 yes yes 0 0 0 0 8 0.816 1 1 1 47.849 47.849 3 7.4849E-05 13672 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.927 0 69.522 44.256 0 114.8 56.315 73.554 65 46 0 106 56 69 1 1 0 2 1 1 17719 12130 2505 11685 28268;28269;28270 32802;32803;32804 32802 3 LFSLTLK Unmodified 820.50584 0.50584045 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 6.5 5.5 1 1 77.831 77.831 2 0.019182 20914 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.24 19.504 69.618 25.098 0 49.46 43.507 188.05 65 28 0 46 46 185 1 1 0 1 1 2 26416 12131 2594 11686 28271;28272 32805;32806 32806 2 LFSYMYSTAPTPQPGTGGTPLAGFGYGLPISR Unmodified 3303.6274 0.6274355 3224 Q9JK42 Pdk2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 96.479 96.479 4 2.4208E-14 27605 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.706 56.983 15.855 13.783 28.621 17.968 6.276 5.33 15 14 28 18 6 5 2 1 1 1 1 1 7792.8 12132 3224 11687 28273;28274 32807;32808 32808 2 LFTAESLIGLK Unmodified 1190.6911 0.69107503 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 10 0.816 1 1 1 85.915 85.915 2;3 1.8438E-07 27096 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.21 71.01 20.387 68.425 62.982 37.82 29.288 0 19 65 65 37 28 0 1 1 2 1 1 0 9148.2 12133 2073 11688 28275;28276;28277 32809;32810;32811 32811 3 LFTAHNNMTNYATVWASK Unmodified 2067.9836 0.98364501 16 A0A087WPL5;E9QNN1;O70133 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 11 0 1 70.64 70.64 3 6.1149E-05 20405 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.167 44.482 0 50.008 0 0 29.288 0 0 47 0 0 28 0 0 1 0 0 1 0 5338.4 12134 16 11689 28278 32812 32812 1 LFTAIGYSENAYNLALPK Unmodified 1984.0306 0.030578432 2475 Q8BX70;A0A1L1SUY8 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 0 10 0 1 88.008 88.008 3 1.0046E-05 28369 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.872 36.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12135 2475 11690 28279 32813 32813 1 LFTESTGVLALEDK Unmodified 1521.7926 0.79263957 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 10 3 1 1 79.871 79.871 3 0.00031163 30682 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.168 38.479 59.488 83.237 63.617 105.63 109.61 124.79 56 83 65 102 111 120 1 2 1 2 1 2 10737 12136 2301;365;912 11691 28280;28281 32814;32815 32815 2 LFTESTGVLALEDKELGR Unmodified 1977.0419 0.0418714 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 1 8 0 1 77.036 77.036 3 3.3905E-07 26635 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.5 77.711 59.488 54.662 54.498 56.438 80.9 96.829 56 56 56 56 83 93 1 1 1 1 1 1 12791 12137 2301;365;912 11692 28282 32816 32816 1 LFTFHADICTLPDTEK Unmodified 1906.9135 0.91349976 656 CON__P02769 yes yes 0 0 0 0 8 0 1 73.928 73.928 3 3.5723E-06 25144 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.911 56.333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 12138 656 11693 28283 32817 32817 1 LFTLTALR Unmodified 933.56475 0.56475231 751 D3Z158;Q8BML9;F6TDS3 Qars yes no 0 0 0 0 1 0 1 75.245 75.245 2 0.034586 25996 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.905 36.509 0 0 38.365 37.471 36.321 19.218 0 0 37 37 37 19 0 0 1 1 1 1 11349 12139 751 11694 28284 32818 32818 1 LFTNFHR Unmodified 933.48209 0.48208531 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 11.5 0.5 1 1 50.056 50.056 3 0.0018419 10240 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.34 97.213 0 77.844 53.336 123.03 0 0 0 74 56 121 0 0 0 1 1 2 0 0 74311 12140 1148 11695 28285;28286 32819;32820 32820 2 LFTTMELMR Unmodified 1140.5671 0.56713685 3097 Q9D8W5;B1AT36;Q3TRH2 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 10 0 1 77.547 77.547 2 0.007815 23794 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.149 35.55 49.128 45.631 0 0 0 49.036 46 46 0 0 0 46 1 1 0 0 0 1 4614 12141 3097 11696 28287 32821 32821 1 LFTVPWPVK Unmodified 1085.6274 0.62735256 2389 Q8BGW1;D3Z127;E9Q1E4 Fto Alpha-ketoglutarate-dependent dioxygenase FTO yes no 0 0 0 0 4.67 5.19 2 1 86.529 86.529 2;3 0.0051415 24148 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.498 50.687 9.2977 58.49 27.953 30.104 26.577 68.532 9 56 28 28 28 65 1 2 1 1 1 2 4893 12142 2389 11697 28288;28289;28290 32822;32823;32824 32824 3 LFVALQGCMDK Unmodified 1280.6257 0.62571436 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 76.416 76.416 3 0.043465 22940 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.148 21.416 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 3549.3 12143 577 11698 28291 32825 32825 1 LFVGGIKEDTEEHHLR Unmodified 1878.9588 0.95881047 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 1 7.33 0.471 2 1 54.284 54.284 4;5 5.7414E-05 15533 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.575 0 275.37 263.19 202.84 278.05 206.07 378.95 259 268 204 269 213 361 3 3 2 3 2 3 30422 12144 1271 11699 28292;28293;28294 32826;32827;32828 32828 3 LFVGGLDWSTTQETLR Unmodified 1821.9261 0.92611336 1971 Q9JII5;Q3UGB5;D3Z4J1 Dazap1 DAZ-associated protein 1 yes no 0 0 0 0 9 0 1 84.171 84.171 2 0.0002329 29150 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.05 57.721 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2202.5 12145 1971 11700 28295 32829 32829 1 LFVGGLK Unmodified 732.45341 0.45341094 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 8.91 4.89 3 3 3 2 65.998 65.998 2 0.0060976 16866 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 140.79 0 3831.5 2937.1 4104.9 3460.8 5013 4548.4 3606 3009 4101 3474 5085 4401 10 8 10 10 10 12 654060 12146 2985 11701 28296;28297;28298;28299;28300;28301;28302;28303;28304;28305;28306 32830;32831;32832;32833;32834;32835;32836;32837;32838;32839;32840;32841;32842;32843 32841 14 LFVGGLSFDTNEQALEQVFSK Unmodified 2328.1638 0.16377745 1677 P60824;K4DI65;D3YU80 Cirbp Cold-inducible RNA-binding protein yes no 0 0 0 0 8.5 0.5 1 1 98.636 98.636 3 5.0369E-11 35271 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.31 76.368 0 5.1734 8.7692 14.779 19.38 14.371 0 5 9 14 19 14 0 1 1 1 1 1 2616.2 12147 1677 11702 28307;28308 32844;32845 32845 2 LFVGNLPADITEDEFK Unmodified 1806.904 0.90398093 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 8.67 3.09 1 1 1 87.47 87.47 3 7.6058E-05 32235 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.919 43.053 59.276 122.59 128.9 116.53 38.412 68.761 56 121 131 111 38 65 2 4 4 2 2 2 7540.5 12148 2724 11703 28309;28310;28311 32846;32847;32848;32849 32847 4 LFVGNLPADITEDEFKR Unmodified 1963.0051 0.005091963 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 1 13 0 1 77.856 77.856 3 1.4427E-05 29855 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.636 59.512 0 39.368 0 71.045 0 99.138 0 37 0 65 0 93 0 1 0 1 0 1 8485.7 12149 2724 11704 28312 32850 32850 1 LFVGNLPTDITEEDFK Unmodified 1836.9145 0.91454562 2658 Q8R326;F7D909 Pspc1 Paraspeckle component 1 yes no 0 0 0 0 7 0 1 86.946 86.946 3 0.025539 31974 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.329 10.394 29.952 18.196 0 20.075 36.791 28.798 28 19 0 19 37 28 1 1 0 1 1 1 1468.5 12150 2658 11705 28313 32851 32851 1 LFVGNLPTDITEEDFKR Unmodified 1993.0157 0.015656649 2658 Q8R326;F7D909 Pspc1 Paraspeckle component 1 yes no 0 0 0 1 7.5 0.5 1 1 77.662 77.662 3 0.00063978 26884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.981 23.498 78.717 72.531 53.674 48.708 67.031 57.783 74 74 56 46 65 56 2 2 2 1 1 2 7740.3 12151 2658 11706 28314;28315 32852;32853 32853 2 LFVGSIPK Unmodified 859.51674 0.51673948 2719;218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UZ48;Q8VHM5;A2AW41;F7B5B5 Syncrip;Hnrnpr Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 0 8.33 5.25 1 1 1 68.305 68.305 2 0.0021747 25044 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 129.4 40.663 325.25 77.131 435.34 0 207.51 171.03 305 74 408 0 204 166 2 1 2 0 2 2 56294 12152 218;2719 11707 28316;28317;28318 32854;32855;32856 32856 3 LFVGTPIDGK Unmodified 1045.5808 0.5807963 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 9 0 1 70.172 70.172 2 0.027955 22680 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.598 12.286 49.074 56.275 0 79.709 62.339 57.917 46 56 0 74 65 56 1 1 0 1 1 1 5153 12153 1802 11708 28319 32857 32857 1 LFVLLPEQSPGSYSK Unmodified 1663.8821 0.88212328 311 A0A1L1SV73;Q8BY87 Usp47 Ubiquitin carboxyl-terminal hydrolase 47 yes no 0 0 0 0 10 0 1 82.892 82.892 3 0.0023371 26354 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.482 29.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12154 311 11709 28320 32858 32858 1 LFVSEGSPGSLPVLAAAAR Unmodified 1841.0047 0.0046980325 950 Q68FL6;E9QB02 Mars Methionine--tRNA ligase, cytoplasmic yes no 0 0 0 0 9 0 1 81.696 81.696 3 0.0072771 28079 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.244 19.12 0 0 40.034 0 76.841 46.843 0 0 37 0 75 46 0 0 1 0 1 1 5185.1 12155 950 11710 28321 32859 32859 1 LFVSGACDASAK Unmodified 1224.5809 0.58087266 1750 P62874;H3BKR2 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 0 0 0 8 3.65 1 1 1 1 1 1 58.673 58.673 2;3 2.5239E-32 20221 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 183.03 138.01 502 670.69 604.58 734.16 824.45 467.3 472 675 606 716 810 446 4 6 5 6 4 4 383270 12156 1750 11711 28322;28323;28324;28325;28326;28327 32860;32861;32862;32863;32864;32865;32866;32867 32867 8 LFVTGLFSLNQDIPAFK Unmodified 1909.0349 0.034935528 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 6.5 5.5 1 1 102.77 102.77 3 1.5655E-06 28738 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.38 82.539 10.64 13.046 4.0736 0 0 7.462 10 13 4 0 0 7 2 2 1 0 0 1 2423.5 12157 2222 11712 28328;28329 32868;32869 32869 2 LFVTNDAATILR Unmodified 1332.7402 0.74015049 1543 P42932;H3BL49;H3BLL1;H3BKG2 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 74.362 74.362 2;3 9.2225E-08 22537 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.63 61.915 177.63 331.23 155.21 353.78 406.89 234.38 167 325 158 338 408 227 2 5 2 4 4 3 79216 12158 1543 11713 28330;28331;28332;28333;28334 32870;32871;32872;32873;32874 32872 5 LFVVKPSLYYDAR Unmodified 1569.8555 0.8555146 2928 Q9CQH3;F6Y6V5;D3YX99;D3Z6W9 Ndufb5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 1 1 0 1 72.176 72.176 3 1.4957E-13 24471 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 128.57 109.28 283.29 183.95 201.46 201.3 281.21 192.38 266 194 206 200 284 188 1 1 1 1 1 1 21480 12159 2928 11714 28335 32875 32875 1 LFVVPTDESQAR Unmodified 1360.6987 0.69867961 1193 O35405 Pld3 Phospholipase D3 yes yes 0 0 0 0 7.5 0.5 1 1 65.485 65.485 2 8.7959E-06 21120 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.22 66.746 68.847 83.393 80.216 95.159 90.881 58.995 65 84 83 93 93 56 2 2 2 2 2 1 12871 12160 1193 11715 28336;28337 32876;32877 32877 2 LFWMPAK Unmodified 891.46768 0.4676808 602 B1AWV9;Q5DTL9 Slc4a10 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger yes no 0 0 0 0 1 0 1 79.154 79.154 2 0.040653 27536 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.027 25.561 69.487 0 43.437 37.178 35.858 33.089 65 0 42 37 37 32 1 0 1 1 1 1 5612.4 12161 602 11716 28338 32878 32878 1 LFYIYTSGTTGLPK Unmodified 1559.8235 0.82354577 2082;2737 Q60714;Q91VE0 Slc27a1;Slc27a4 Long-chain fatty acid transport protein 1;Long-chain fatty acid transport protein 4 no no 0 0 0 0 6.5 5.5 1 1 81.736 81.736 3 9.8524E-05 22437 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.288 52.402 20.265 0 20.456 0 0 28 19 0 19 0 0 28 1 0 1 0 0 1 6033.2 12162 2082;2737 11717 28339;28340 32879;32880 32880 2 LFYLALPPTVYEAVTK Unmodified 1824.0073 0.0073237944 1869 Q00612;A3KG36 G6pdx Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase yes no 0 0 0 0 6.75 5.76 2 1 1 99.048 99.048 3 6.9706E-06 33976 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.45 76.166 34.752 0 7.2524 13.777 27.961 38.644 33 0 7 13 28 37 3 0 1 2 1 1 27309 12163 1869 11718 28341;28342;28343;28344 32881;32882;32883;32884;32885 32882 5 LFYLGIR Unmodified 880.51707 0.51707383 2034 Q505D7;A0A0U1RPB1 Opa3 Optic atrophy 3 protein homolog yes no 0 0 0 0 1 0 1 75.731 75.731 2 0.027473 26076 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.95 0 20.292 18.848 0 34.976 0 0 19 19 0 32 0 0 1 1 0 1 0 0 5755.6 12164 2034 11719 28345 32886 32886 1 LFYSTFATDDRR Unmodified 1490.7154 0.7153923 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 1 9.5 0.5 1 1 60.522 60.522 3 1.2237E-11 18149 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.54 93.818 197.91 211.61 100.27 204.75 128.09 253.25 186 213 102 195 130 241 2 2 1 2 1 2 59241 12165 2401 11720 28346;28347 32887;32888 32887 2 LFYSVLMSDVEK Unmodified 1429.7163 0.71630351 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10.8 1.48 1 1 1 1 89.104 89.104 2;3 1.2344E-17 28895 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.96 104.66 27.509 6.7997 92.001 35.609 46.679 58.649 26 7 87 35 47 56 2 1 3 2 2 1 11873 12166 1317 11721 28348;28349;28350;28351 32889;32890;32891;32892 32890 4 LGAAPEEESAYVAGER Unmodified 1647.774 0.77402939 3000 Q9CZ44 Nsfl1c NSFL1 cofactor p47 yes yes 0 0 0 0 3 0.707 1 2 1 54.255 54.255 2;3 2.9535E-05 18292 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.17 71.651 79.082 17.563 99.422 30.079 130.97 105.79 74 19 93 28 130 102 2 1 3 1 4 3 34492 12167 3000 11722 28352;28353;28354;28355 32893;32894;32895;32896 32896 4 LGACLAFLPEAFDFIAR Unmodified 1909.976 0.97604044 719 D3Z2Y2;D3Z3I3;D3YY53;Q8VDK1 Nit1 Nitrilase homolog 1 yes no 0 0 0 0 9.5 0.5 1 1 105.58 105.58 3 0.00024942 33625 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.777 40.031 5.3072 16.448 9.7112 7.5442 5.6787 7.3 5 16 9 7 6 7 1 2 1 1 1 1 3872.9 12168 719 11723 28356;28357 32897;32898;32899 32898 3 LGAEVYHTLK Unmodified 1129.6132 0.61315906 1399 P17183;A0A0N4SUX5 Eno2 Gamma-enolase yes no 0 0 0 0 8.67 2.21 1 2 3 1 1 1 55.851 55.851 2;3;4 3.6776E-07 16662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.08 78.06 858.4 740.39 937.69 915.55 909.77 1039.6 805 744 932 890 920 994 7 6 7 6 7 6 336640 12169 1399 11724 28358;28359;28360;28361;28362;28363;28364;28365;28366 32900;32901;32902;32903;32904;32905;32906;32907;32908;32909 32904 10 LGAGGLASAAASAQR Unmodified 1299.6895 0.6895119 1195 O35449 Prrt1 Proline-rich transmembrane protein 1 yes yes 0 0 0 0 9 0 1 51.766 51.766 2 9.7882E-22 13953 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 136.38 98.084 34.073 0 44.27 22.501 0 29.848 32 0 42 23 0 28 1 0 1 1 0 1 6100.4 12170 1195 11725 28367 32910 32910 1 LGAGYPMGPFELLDYVGLDTTK Unmodified 2356.1661 0.16608564 2127 Q61425 Hadh Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 0 9 0 1 105.98 105.98 3 3.8157E-10 37032 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.122 49.254 9.657 0 0 0 9.414 0 9 0 0 0 9 0 1 0 0 0 1 0 1436.5 12171 2127 11726 28368 32911 32911 1 LGALLAR Unmodified 712.45956 0.45955895 1332 P09240;A0A1L1SU12;A0A1L1SRD3;Q8R041 Cck Cholecystokinin;Cholecystokinin-33;Cholecystokinin-12;Cholecystokinin-8 yes no 0 0 0 0 11 0 1 60.732 60.732 2 0.037239 15967 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.498 0 178.4 156.08 0 205.48 0 0 167 158 0 188 0 0 1 1 0 1 0 0 43415 12172 1332 11727 28369 32912 32912 1 LGANSLLDLVVFGR Unmodified 1472.8351 0.83511351 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 12 0.707 1 2 1 97.916 97.916 2;3 1.1236E-24 28022 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 149.83 106.18 0 0 32.58 21.589 32.408 72.868 0 0 31 22 33 72 0 0 1 1 2 3 61235 12173 2597 11728 28370;28371;28372;28373 32913;32914;32915;32916 32915 4 LGAPISSGLSDLFDLTSGVGTLSGSYVAPK Unmodified 2908.507 0.50696924 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 10.4 1.36 1 3 1 105.15 105.15 3;4;5 3.8892E-32 33563 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.967 85.719 60.862 77.688 53.03 59.624 54.34 89.817 57 76 52 57 54 85 5 5 3 4 4 4 33002 12174 1203 11729 28374;28375;28376;28377;28378 32917;32918;32919;32920;32921;32922;32923;32924;32925 32924 9 LGAPQQPGPGPPPPHSR Unmodified 1688.8747 0.87468691 221 A0A0R4J2B2;Q6WVG3 Kctd12 BTB/POZ domain-containing protein KCTD12 yes no 0 0 0 0 7 0 1 38.734 38.734 3 7.3373E-05 9372 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.652 52.533 0 0 0 20.43 17.928 29.336 0 0 0 19 19 28 0 0 0 1 1 1 3762 12175 221 11730 28379 32926 32926 1 LGAPQTHLGLK Unmodified 1133.6557 0.65569258 2510 Q8C845;Q9D8Y0;Q9D4J1 Efhd2;Efhd1 EF-hand domain-containing protein D2;EF-hand domain-containing protein D1 yes no 0 0 0 0 10 0 1 52.02 52.02 3 0.021536 12506 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.419 23.806 109.04 80.96 0 101.65 0 88.478 102 83 0 93 0 83 1 1 0 1 0 1 10597 12176 2510 11731 28380 32927 32927 1 LGAQALLGAAK Unmodified 1011.6077 0.60767975 2808 Q922Q4;Q922W5;A2ABZ2 Pycr2;Pycr1 Pyrroline-5-carboxylate reductase 2;Pyrroline-5-carboxylate reductase 1, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 65.789 65.789 2;3 3.0354E-08 18050 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.36 81.279 69.049 63.447 63.248 65.699 185.8 0 65 65 65 65 185 0 1 1 1 1 2 0 16075 12177 2808 11732 28381;28382 32928;32929 32929 2 LGASNLPAGISLPASAK Unmodified 1565.8777 0.8777066 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 9.75 0.829 2 1 1 71.242 71.242 3;4 2.8391E-07 23234 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.19 61.652 148.26 125.45 545.71 0 319.94 457.78 139 120 512 0 318 438 2 1 4 0 2 3 73880 12178 1348 11733 28383;28384;28385;28386 32930;32931;32932;32933 32930 4 LGAVFNQVAFPLQYTPR Unmodified 1920.0258 0.025767826 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 6.5 5.5 1 1 88.99 88.99 3 1.9734E-08 25340 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.34 88.812 0 0 38.364 47.171 43.612 68.046 0 0 37 46 46 65 0 0 1 2 2 2 18929 12179 2799 11734 28387;28388 32934;32935 32935 2 LGCEVLGVSVDSQFTHLAWINTPR Unmodified 2698.3537 0.35372026 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 9 0 1 85.447 85.447 3 0.00061012 29801 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.384 27.455 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 3117.1 12180 2116 11735 28389 32936 32936 1 LGCFNLTVK Unmodified 1050.5532 0.55320134 148 A0A0R4J008;P70288;Q8BQ10 Hdac2 Histone deacetylase 2 yes no 0 0 0 0 11 0 1 70.145 70.145 2 0.020233 20060 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.841 24.796 109.24 41.578 0 0 0 0 102 46 0 0 0 0 1 1 0 0 0 0 8843 12181 148 11736 28390 32937 32937 1 LGCGPEGER Unmodified 973.42873 0.42872911 1796;2030;1425 P68404;P20444;Q4VA93;Q3TQ39 Prkcb;Prkca Protein kinase C beta type;Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 13 0 1 35.255 35.255 2 0.0037761 9121 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.046 61.164 118.79 61.15 0 0 0 88.478 111 65 0 0 0 83 1 1 0 0 0 1 11469 12182 1796;1425;2030 11737 28391 32938 32938 1 LGCTLPQLAIAWCLR Unmodified 1770.9273 0.92731611 802 Q3UPV6;E0CXZ9;P62482 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 0 6.5 5.5 1 1 90.353 90.353 3 0.00016842 32237 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.115 47.538 11.726 0 21.925 0 0 0 11 0 21 0 0 0 1 0 2 0 0 0 6772.8 12183 802 11738 28392;28393 32939;32940;32941 32939 3 LGDASDTEAVDGER Unmodified 1433.627 0.62703081 2312 Q80U49;B9EIX2 Cep170b Centrosomal protein of 170 kDa protein B yes no 0 0 0 0 1.5 0.5 1 1 45.745 45.745 2;3 0.00045772 13364 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.943 56.609 49.237 19.729 49.422 0 19.197 19.706 46 19 47 0 19 19 1 1 2 0 1 1 5868.9 12184 2312 11739 28394;28395 32942;32943 32942 2 LGDAVEQGVINNSVLGYFIGR Unmodified 2220.1539 0.15388147 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 8.5 0.5 1 1 97.685 97.685 3 5.7336E-10 35123 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.293 64.679 23.387 0 0 20.767 0 0 22 0 0 19 0 0 2 0 0 1 0 0 5493.4 12185 3002 11740 28396;28397 32944;32945 32944 2 LGDDDVR Unmodified 788.36645 0.36644643 2093 Q60865 Caprin1 Caprin-1 yes yes 0 0 0 0 3 0 1 38.048 38.048 2 0.034977 11224 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.305 39.831 0 0 58.545 45.948 44.695 38.167 0 0 56 46 46 37 0 0 1 1 1 1 7227.2 12186 2093 11741 28398 32946 32946 1 LGDGLFLQCCEEVAELYPK Unmodified 2240.0493 0.049341318 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 8.33 3.35 1 2 1 2 88.058 88.058 3;4 9.0132E-06 34629 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.12 44.721 109.79 111.39 68.57 76.509 140.49 77.084 103 111 69 74 139 74 4 4 3 3 3 3 28946 12187 2734 11742 28399;28400;28401;28402;28403;28404 32947;32948;32949;32950;32951;32952 32952 6 LGDGLFLQCCR Unmodified 1337.622 0.62202597 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 9 2.1 1 2 1 1 68.841 68.841 2;3 0.00063374 22776 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.848 54.241 265.33 245.67 169.74 194.88 242.52 291.3 249 241 167 185 241 277 3 3 2 3 3 4 49373 12188 1814 11743 28405;28406;28407;28408;28409 32953;32954;32955;32956;32957 32955 5 LGDICFSLR Unmodified 1079.5434 0.54336494 1553 P46096;Q9R0N5 Syt1;Syt5 Synaptotagmin-1;Synaptotagmin-5 yes no 0 0 0 0 8 1 1 1 72.81 72.81 2 0.0017863 23972 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.009 41.995 347.31 180.71 264.2 203.91 176.14 413.91 326 196 262 204 188 393 2 2 1 1 1 2 56151 12189 1553 11744 28410;28411 32958;32959 32959 2 LGDLGGDISSVTFYHQGK Unmodified 1892.9268 0.92684164 2292 Q7TQG7;Q9R1V4 Adam11 Disintegrin and metalloproteinase domain-containing protein 11 yes no 0 0 0 0 8 0 1 71.79 71.79 4 0.044087 24149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 30.107 11.743 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 2484.4 12190 2292 11745 28412 32960 32960 1 LGDLYEEEMR Unmodified 1253.5598 0.55980286 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 3 0 1 64.349 64.349 2 3.7986E-05 23193 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.258 73.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12191 1423 11746 28413 32961 32961 1 LGDPAEYAHLVQTIIENPFLNGEVIR Deamidation (N) 2908.4971 0.49707326 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 1 0 0 8 1 1 1 105.95 105.95 4 3.802E-07 37394 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.658 46.471 2.136 1.984 0 0 7.092 0 2 2 0 0 7 0 1 1 0 0 2 0 2066.7 12192 2879 11747 28414;28415 32962;32963 32962 1017 2 LGDPAEYAHLVQTIIENPFLNGEVIR Unmodified 2907.5131 0.51305767 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 8.5 0.5 1 1 106.45 106.45 4 3.4702E-08 36639 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.912 33.285 7.4603 4.9599 4.3173 0 0 7.462 7 5 4 0 0 7 2 1 1 0 0 1 1899.5 12193 2879 11747 28416;28417 32964;32965 32964 2 LGDPDGAGEPPSTPSGLGAGGDR Unmodified 2078.9505 0.95049021 918 E9Q6J8;Q08274 Dmwd Dystrophia myotonica WD repeat-containing protein yes no 0 0 0 0 3 0 1 55.352 55.352 3 0.0018415 19162 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.546 24.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12194 918 11748 28418 32966 32966 1 LGDPLLEDTR Unmodified 1127.5823 0.58225287 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 4.5 0.5 1 1 63.161 63.161 2 0.0024796 22378 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.731 37.448 0 0 0 46.075 49.138 0 0 0 0 43 49 0 0 0 0 1 1 0 6430.4 12195 1958 11749 28419;28420 32967;32968 32967 2 LGDQHADK Unmodified 882.41954 0.41954463 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 6 0.816 1 1 1 32.986 32.986 3 0.009043 7286 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.224 31.146 510.17 297.15 567.14 384.12 501.78 469.65 480 318 557 391 512 454 3 2 2 3 3 3 38866 12196 90 11750 28421;28422;28423 32969;32970;32971 32970 3 LGDSHDLQR Unmodified 1039.5047 0.50467125 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4 0.816 1 1 1 34.274 34.274 3 1.6763E-06 8366 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 153.05 86.052 295.68 242.21 322.68 333.75 351.84 257.01 277 232 314 329 355 249 1 3 2 3 2 1 73824 12197 551 11751 28424;28425;28426 32972;32973;32974;32975 32975 4 LGDVISIQPCPDVK Unmodified 1539.7967 0.79667909 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 6.5 0.5 1 1 72.678 72.678 3 6.6027E-05 25143 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.631 74.968 88.568 119.37 139.87 65.498 83.862 214 83 120 139 65 83 203 1 2 2 1 1 2 21200 12198 1875 11752 28427;28428 32976;32977 32977 2 LGDVYVNDAFGTAHR Unmodified 1633.7849 0.78486885 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 60.655 60.655 3 9.3918E-24 21118 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.05 113.03 182.86 63.371 50.177 305.83 259.04 204.2 171 65 51 287 264 195 4 2 1 6 5 4 207580 12199 1334 11753 28429;28430;28431;28432;28433 32978;32979;32980;32981;32982;32983 32978 6 LGDVYVNDAFGTAHR Deamidation (N) 1634.7689 0.76888444 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 1 0 0 5 0 1 61.531 61.531 3 2.1513E-07 21356 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.59 80.852 39.184 35.78 56.596 37.068 0 59.696 37 37 56 37 0 56 1 1 1 1 0 1 11785 12200 1334 11753 28434 32984 32984 404 1 LGEEDEQGWCR Unmodified 1377.5619 0.56192813 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 50.917 50.917 2 2.0967E-10 17127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 141.29 112.34 158.14 210.82 307.77 221.74 194.32 155.47 149 213 306 223 194 148 2 4 4 4 2 3 64177 12201 2133 11754 28435;28436;28437;28438 32985;32986;32987;32988 32986 4 LGEHEFEALMR Unmodified 1330.634 0.63397086 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 8 3.56 1 1 1 62.192 62.192 3 0.0031139 21235 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.172 45.035 148.6 127.08 0 119.3 165.86 66.956 139 130 0 112 166 65 2 3 0 2 2 1 18009 12202 3275 11755 28439;28440;28441 32989;32990;32991 32990 3 LGEIVTTIPTIGFNVETVEYK Unmodified 2322.2359 0.23587976 1693;1833;1834;1700 P84084;P61205;Q8BSL7;P84078;P61750 Arf5;Arf3;Arf2;Arf1;Arf4 ADP-ribosylation factor 5;ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1;ADP-ribosylation factor 4 no no 0 0 0 0 9.5 2.24 2 1 2 1 2 95.245 95.245 3;4 6.1518E-26 38027 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.38 80.732 178.66 126.98 56.862 96.847 124.2 82.852 167 125 54 91 121 79 5 5 3 4 4 4 68493 12203 1834;1693;1833;1700 11756 28442;28443;28444;28445;28446;28447;28448;28449 32992;32993;32994;32995;32996;32997;32998;32999;33000 33000 9 LGELLFPSSLAGETLGSFSGLR Unmodified 2250.1896 0.18959827 2315 Q80U93 Nup214 Nuclear pore complex protein Nup214 yes yes 0 0 0 0 10.5 0.5 1 1 102.15 102.15 3 1.1245E-06 33077 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.904 42.024 0 4.256 0 4.372 0 6.396 0 4 0 4 0 6 0 1 0 1 0 1 1002.5 12204 2315 11757 28450;28451 33001;33002 33001 2 LGELPSWIMMR Unmodified 1331.673 0.6729989 1630 P56135;F8WHP8 Atp5j2 ATP synthase subunit f, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 86.919 86.919 2 0.00093056 27989 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.263 64.826 74 29.792 0 0 46.111 58.38 74 28 0 0 46 56 1 1 0 0 1 1 11872 12205 1630 11758 28452;28453 33003;33004 33003 2 LGEQLGFEFFETSAK Unmodified 1701.825 0.82500233 1743 P62823;A0A286YDR2 Rab3c Ras-related protein Rab-3C yes no 0 0 0 0 9 2.94 1 1 1 87.309 87.309 2;3 4.8676E-05 31536 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.57 72.432 40.329 18.373 59.286 0 29.288 0 38 19 56 0 28 0 2 1 2 0 1 0 6784.6 12206 1743 11759 28454;28455;28456 33005;33006;33007 33006 3 LGESQTLQQFSR Unmodified 1392.6997 0.69974224 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.67 3.2 1 1 1 1 2 55.946 55.946 2;3 2.3713E-25 18294 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 150.51 104.38 305.95 272.9 198.64 40.441 196.36 330.19 287 269 195 37 195 315 3 3 3 1 2 4 66818 12207 551 11760 28457;28458;28459;28460;28461;28462 33008;33009;33010;33011;33012;33013 33009 6 LGESTNAAK Unmodified 889.45051 0.45051041 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 6.5 0.5 1 1 39.974 39.974 2 0.0017843 10638 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.033 48.615 24.381 22.306 31.218 93.096 65.252 77.022 23 23 32 88 69 74 1 1 1 2 2 2 10660 12208 2832 11761 28463;28464 33014;33015 33014 2 LGESVQDLSSFDEYSSELK Unmodified 2131.9797 0.97972465 65 A0A0A6YX18;Q8BVE3 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 6.4 3.38 2 1 1 1 81.337 81.337 3;4 5.5547E-39 31380 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.34 91.461 149.35 118.55 45.268 154.78 194.51 75.468 140 120 47 149 194 74 4 3 2 4 4 2 40783 12209 65 11762 28465;28466;28467;28468;28469 33016;33017;33018;33019;33020;33021 33021 6 LGETYKDHENIIIAK Unmodified 1742.9203 0.9202997 1331 P09103;E9Q8G8 P4hb Protein disulfide-isomerase yes no 0 0 0 1 6 0 1 58.354 58.354 4 0.0052986 19334 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.14 29.545 48.66 74.549 54.216 37.21 0 59.696 46 74 56 37 0 56 1 1 1 1 0 1 3832 12210 1331 11763 28470 33022 33022 1 LGEVAEAVEAR Unmodified 1142.5932 0.5931519 3201 Q9JHG6 Rcan1 Calcipressin-1 yes yes 0 0 0 0 4.5 0.5 1 1 61.509 61.509 2 0.0018784 21670 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.908 22.817 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12211 3201 11764 28471;28472 33023;33024 33023 2 LGEVQAGWEDLR Unmodified 1371.6783 0.67827852 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9 4 1 1 69.183 69.183 2 0.00025412 25302 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.26 14.437 39.474 0 38.174 37.293 46.403 0 37 0 37 37 46 0 1 0 1 1 1 0 10185 12212 2186 11765 28473;28474 33025;33026 33026 2 LGEWVGLCK Unmodified 1060.5376 0.53755128 1013 Q6ZWZ6;F7AEH4;A0A1W2P7A1;P63323 Rps12 40S ribosomal protein S12 yes no 0 0 0 0 10 0 1 73.378 73.378 2 0.014515 22129 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.954 37.113 39.342 0 60.394 0 0 59.696 37 0 56 0 0 56 1 0 1 0 0 1 5299.8 12213 1013 11766 28475 33027 33027 1 LGEYGFQNALIVR Unmodified 1478.7882 0.78816332 656 CON__P02769 yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 74.179 74.179 2;3 9.3369E-21 25246 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 155.53 0 286.8 217.5 217.63 155.64 232.01 285.01 269 214 214 150 231 271 6 4 4 3 3 6 92439 + 12214 656 11767 28476;28477;28478;28479;28480 33028;33029;33030;33031;33032;33033;33034;33035 33029 8 LGFAGVVQEISFGTTK Unmodified 1652.8774 0.87737225 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 10.5 1.12 1 1 1 1 87.946 87.946 3 1.7707E-05 31101 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.578 63 57.657 66.731 25.653 78.658 120 87.421 56 65 28 74 120 83 2 2 1 2 3 2 32854 12215 1825 11768 28481;28482;28483;28484 33036;33037;33038;33039;33040;33041 33036 6 LGFFGTGECFVFR Unmodified 1535.7231 0.72312022 2006 Q3UUG6;A0A0J9YUB2 Tbc1d24 TBC1 domain family member 24 yes no 0 0 0 0 10.5 0.5 1 1 87.298 87.298 2 3.5604E-11 28144 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.42 97.356 19.208 41.265 0 81.975 0 50.102 18 40 0 75 0 47 1 2 0 1 0 2 9440.6 12216 2006 11769 28485;28486 33042;33043 33042 2 LGFHLPLEVAYQR Unmodified 1541.8354 0.83544786 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 9.5 0.5 1 1 72.127 72.127 3 9.0253E-05 21608 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.226 61.028 39.468 46.283 0 50.731 71.409 106.69 37 46 0 47 74 102 1 1 0 1 2 2 21279 12217 3266 11770 28487;28488 33044;33045 33045 2 LGFMSAFVK Unmodified 998.52592 0.52592396 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 3.2 4.4 4 1 84.334 84.334 2;3 0.0004745 22765 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.099 57.623 222.2 215.78 75.886 206.63 259.41 239.9 208 214 74 195 261 231 5 5 2 5 5 6 11682 12218 3049 11771 28489;28490;28491;28492;28493 33046;33047;33048;33049;33050;33051;33052;33053;33054;33055 33055 10 LGFPQILLEK Unmodified 1156.6856 0.68559573 1079 H7BX46;G3X932;P59281 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 10.5 0.5 1 1 85.686 85.686 3 0.0090367 27529 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.79 28.939 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 3786 12219 1079 11772 28494;28495 33056;33057 33056 2 LGFQGAQDLANMFR Unmodified 1566.7613 0.76129664 673 Q8K2T1;D3YU12 Nmral1 NmrA-like family domain-containing protein 1 yes no 0 0 0 0 10 0 1 85.215 85.215 3 0.00065511 27246 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.313 42.756 29.904 27.776 0 0 29.288 0 28 28 0 0 28 0 1 1 0 0 1 0 2619.6 12220 673 11773 28496 33058 33058 1 LGFSEVELVQMVVDGVK Unmodified 1847.9703 0.97028636 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 9.82 2.44 1 1 2 2 1 1 3 103.71 103.71 2;3;4 6.86E-39 37155 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 155.26 80.781 388.76 342.25 401.42 305.87 222.63 414.99 365 344 396 295 223 392 12 13 11 7 9 11 212120 12221 1883 11774 28497;28498;28499;28500;28501;28502;28503;28504;28505;28506;28507 33059;33060;33061;33062;33063;33064;33065;33066;33067;33068;33069;33070;33071;33072;33073;33074;33075;33076;33077;33078 33061 20 LGFSEVELVQMVVDGVK Oxidation (M) 1863.9652 0.96520098 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 1 0 9.2 1.94 3 1 1 99.785 99.785 3 6.568E-06 36205 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.316 48.218 29.891 40.357 43.563 30.079 60.484 35.049 28 40 41 28 60 34 2 3 4 1 4 3 7990.6 12222 1883 11774 28508;28509;28510;28511;28512 33079;33080;33081;33082;33083;33084;33085;33086 33084 159 8 LGFVAGVINR Unmodified 1044.608 0.60801411 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9.25 4.82 1 1 1 1 69.957 69.957 2 1.3003E-07 23915 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.78 103.54 525.94 806.41 882.3 947.07 978.86 810.08 495 802 870 920 1004 780 3 5 5 4 5 3 444240 12223 1151 11775 28513;28514;28515;28516 33087;33088;33089;33090;33091;33092 33088 6 LGFVSCK Unmodified 809.41056 0.41055985 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 11 0 1 57.605 57.605 2 0.035629 14634 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.784 28.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10562 12224 432 11776 28517 33093 33093 1 LGGAPTGQGVSPSPSAILER Unmodified 1892.9956 0.99558991 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 6.5 0.5 1 1 64.042 64.042 3 8.4362E-11 21888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.911 76.315 79.951 25.284 66.699 38.396 45.701 58.392 75 28 65 38 46 56 2 1 2 1 1 2 12791 12225 573 11777 28518;28519 33094;33095 33094 2 LGGDVSPTQIDVSQFGSFK Unmodified 1980.9793 0.97927114 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 0 1 80.117 80.117 3 0.0010609 28096 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.729 29.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12226 1382 11778 28520 33096 33096 1 LGGEVSCLVAGTK Unmodified 1289.6649 0.66493664 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 67.81 67.81 3 0.00016187 22986 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.563 42.702 118.03 109.76 86.79 125.12 45.967 59.696 111 112 92 120 46 56 2 2 2 2 1 1 11851 12227 2860 11779 28521;28522 33097;33098 33097 2 LGGEVSCLVAGTKCDK Unmodified 1692.8175 0.81749089 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 1 13 0 1 49.457 49.457 5 0.049457 16079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 32.341 4.6918 756.1 619.81 798.84 724.05 0 621.48 712 643 806 706 0 583 1 1 1 1 0 1 38001 12228 2860 11780 28523 33099 33099 1 LGGIGQFLAK Unmodified 1002.5862 0.58621603 16 A0A087WPL5;E9QNN1;O70133 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 11.5 0.5 1 1 75.924 75.924 2 2.1443E-05 22586 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 127.56 75.569 0 0 49.772 0 167.07 97.024 0 0 46 0 167 93 0 0 1 0 2 1 33891 12229 16 11781 28524;28525 33100;33101 33100 2 LGGLSISPAGIVK Unmodified 1210.7285 0.72852317 2751 Q91WA3 Hdac11 Histone deacetylase 11 yes yes 0 0 0 0 10 0 1 74.482 74.482 3 0.00010609 22520 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.911 62.092 39.596 0 17.709 59.476 35.97 0 37 0 19 56 37 0 1 0 1 1 1 0 4529.3 12230 2751 11782 28526 33102 33102 1 LGGPQEEQIK Unmodified 1097.5717 0.57168818 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 5.5 0.5 1 1 49.654 49.654 2;3 0.0013744 15846 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.221 38.901 147.6 135.5 145.93 119.71 146.12 173.85 139 139 148 120 148 167 2 2 2 2 1 2 9827.4 12231 246 11783 28527;28528 33103;33104 33103 2 LGGSAESLIPGFQPTQGDAFTTPSFSAGTAEK Unmodified 3168.5251 0.5251385 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 7 0 1 87.108 87.108 4 2.6391E-06 32040 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.048 39.399 20.178 18.532 19.344 0 19.874 0 19 19 19 0 19 0 1 1 1 0 1 0 3259.7 12232 1983 11784 28529 33105 33105 1 LGGSAVISLEGKPL Unmodified 1339.7711 0.77111627 1410 P18760 Cfl1 Cofilin-1 yes yes 0 0 0 1 9.62 2.12 2 1 1 1 1 1 1 74.8 74.8 2;3 4.203E-17 28134 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.15 112.41 573.9 541.77 681.87 918.92 530.12 745.71 538 536 676 880 546 713 9 8 9 10 9 10 394400 12233 1410 11785 28530;28531;28532;28533;28534;28535;28536;28537 33106;33107;33108;33109;33110;33111;33112;33113;33114;33115;33116;33117;33118;33119 33118 14 LGGSLADSYLDEGFLLDK Unmodified 1911.9466 0.94657403 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 6.5 0.5 1 1 90.454 90.454 3 1.9513E-07 33507 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.707 66.764 20.265 20.216 20.456 20.767 0 20.254 19 19 19 19 0 19 1 1 1 1 0 1 4017.6 12234 1823 11786 28538;28539 33120;33121 33121 2 LGGSLADSYLDEGFLLDKK Unmodified 2040.0415 0.041537049 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 1 9.33 2.62 1 1 1 82.465 82.465 3;4 2.6057E-08 31957 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.99 78.199 217.4 82.986 0 40.441 161.63 106.06 203 83 0 37 158 102 3 1 0 1 2 1 12872 12235 1823 11787 28540;28541;28542 33122;33123;33124 33124 3 LGGSLIVAFEGSPV Unmodified 1344.7289 0.7289171 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 8.75 3.49 1 1 1 2 1 1 1 96.832 96.832 2;3 0.00021375 31576 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.338 43.045 51.779 5 63.036 24.668 92.815 34.66 49 5 59 24 90 34 5 1 4 3 5 3 25304 12236 3301 11788 28543;28544;28545;28546;28547;28548;28549;28550 33125;33126;33127;33128;33129;33130;33131;33132;33133;33134;33135 33132 11 LGGSPFGPAGTGK Unmodified 1144.5877 0.58767259 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 58.904 58.904 2 1.2253E-06 17380 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.35 81.834 60.088 0 0 69.522 80.995 76.573 56 0 0 65 83 74 1 0 0 1 1 1 7364.1 12237 3204 11789 28551 33136 33136 1 LGGSVELVDIGK Unmodified 1185.6605 0.66050319 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 8.67 3.09 1 1 1 71.783 71.783 3 2.0877E-06 24790 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.63 68.12 39.468 84.35 137.21 56.815 102.22 115.41 37 83 130 56 102 111 1 2 2 2 2 3 14096 12238 3038 11790 28552;28553;28554 33137;33138;33139 33138 3 LGGTCVNVGCVPK Unmodified 1359.6639 0.66389078 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 8 0 1 58.129 58.129 3 0.0031849 17722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.726 30.168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12239 1566 11791 28555 33140 33140 1 LGGTIDDCELVEGLVLTQK Unmodified 2059.0507 0.050721527 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 8 3.56 1 1 1 88.307 88.307 3 1.3598E-07 33201 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.514 57.961 29.872 29.792 28.882 58.486 53.196 98.686 28 28 28 56 56 94 1 2 1 2 2 3 6645.8 12240 1824 11792 28556;28557;28558 33141;33142;33143 33142 3 LGGVEFNIDLPNKK Unmodified 1542.8406 0.84059282 1173 O08997 Atox1 Copper transport protein ATOX1 yes yes 0 0 0 1 9 0.707 1 2 1 71.109 71.109 3;4 0.00085665 23131 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.423 38.948 325.06 298.7 343.05 59.981 149.76 293.94 306 306 333 56 148 278 3 3 3 1 2 3 49063 12241 1173 11793 28559;28560;28561;28562 33144;33145;33146;33147;33148 33147 5 LGHEATVGK Unmodified 910.48723 0.48723027 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 6 0 1 37.825 37.825 3 0.025298 9599 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.198 15.263 0 0 77.593 55.567 54.026 58.154 0 0 74 56 56 56 0 0 1 1 1 1 5468.6 12242 2020 11794 28563 33149 33149 1 LGHSVTAAK Unmodified 882.49232 0.49231565 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 9 0 1 36.582 36.582 3 0.0017954 7447 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.465 45.093 138.29 0 202.38 177.73 137.23 0 130 0 195 176 139 0 1 0 1 1 1 0 14421 12243 2730 11795 28564 33150 33150 1 LGIAPQIQDLLGK Unmodified 1364.8028 0.80275075 2003 Q3UQ44 Iqgap2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 0 10.5 0.5 1 1 86.929 86.929 3 9.3059E-05 28002 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.958 55.522 0 39.368 0 0 0 20.254 0 37 0 0 0 19 0 1 0 0 0 1 1927.4 12244 2003 11796 28565;28566 33151;33152 33151 2 LGIHEDSQNR Unmodified 1167.5632 0.56324876 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 4.5 0.5 1 1 33.049 33.049 2;3 0.0014434 8299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.399 55.138 0 0 0 71.045 0 107.48 0 0 0 65 0 102 0 0 0 1 0 2 10290 12245 1322 11797 28567;28568 33153;33154 33153 2 LGIHEDSTNR Unmodified 1140.5523 0.55234972 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 7.75 3.11 1 1 1 1 33.762 33.762 3 7.3745E-06 7712 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.45 105.77 129.16 48.03 283.75 303.42 227.86 359.14 121 46 278 297 232 343 2 1 4 4 2 4 79113 12246 1354 11798 28569;28570;28571;28572 33155;33156;33157;33158 33156 4 LGIIGVVNR Unmodified 939.58655 0.58655038 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 11.5 1.12 1 1 1 1 64.685 64.685 2 2.9639E-05 15832 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 143.37 76.333 335.04 315.28 410.45 379.14 101.04 352.85 316 324 414 371 102 331 3 3 3 3 1 2 169570 12247 815;2590 11799 28573;28574;28575;28576 33159;33160;33161;33162;33163 33162 5 LGILGLCNTLAIEGR Unmodified 1598.8814 0.88141177 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 11 0 1 83.407 83.407 3 3.7836E-05 26068 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.175 56.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12248 1602 11800 28577 33164 33164 1 LGILTHLYR Unmodified 1084.6393 0.63931423 714 D3YXG2;Q9D997;Q9QZ08 Nagk N-acetyl-D-glucosamine kinase yes no 0 0 0 0 1 0 1 66.961 66.961 3 0.0056479 22511 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.436 40.675 20.297 8.0695 8.2483 20.275 0 0 19 9 9 19 0 0 1 1 1 1 0 0 1727.1 12249 714 11801 28578 33165 33165 1 LGINLLGGPLGGK Unmodified 1207.7289 0.72885752 2592 Q8K1R7 Nek9 Serine/threonine-protein kinase Nek9 yes yes 0 0 0 0 12 0 1 81.822 81.822 3 7.074E-07 22614 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.92 67.02 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12250 2592 11802 28579 33166 33166 1 LGIPMSVLMGANIASEVAEEK Unmodified 2158.1014 0.10137689 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 10 0 1 98.427 98.427 3 1.2161E-08 32264 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.853 50.808 6.3609 0 12.952 0 15.69 0 6 0 12 0 15 0 1 0 1 0 1 0 2970.9 12251 1368 11803 28580 33167 33167 1 LGIQAEPLYR Unmodified 1158.6397 0.63970816 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.5 0.5 1 1 60.939 60.939 2 0.00011876 19785 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.01 56.44 126.97 126.51 194.11 72.633 203.62 187.14 120 130 190 74 204 181 2 2 2 1 2 2 33056 12252 510 11804 28581;28582 33168;33169 33168 2 LGISSLQEFK Unmodified 1120.6128 0.61282471 750 D3Z637;D3Z125;E9PUA7;D3Z7X7;F8WHQ1;Q62393;D3Z2U2 Tpd52 Tumor protein D52 yes no 0 0 0 0 8.5 0.5 1 1 72.221 72.221 3 0.0021087 24425 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.435 46.822 0 39.368 0 30.604 0 20.254 0 37 0 28 0 19 0 1 0 1 0 1 4033.9 12253 750 11805 28583;28584 33170;33171 33170 2 LGITHVLNAAEGR Unmodified 1349.7415 0.74154747 571 B1AQF4;Q9D7X3;H3BKL8 Dusp3 Dual specificity protein phosphatase 3 yes no 0 0 0 0 8 0 1 57.801 57.801 3 0.00079784 17478 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.662 41.669 0 38.575 47.458 0 0 29.848 0 37 46 0 0 28 0 1 1 0 0 1 7739.5 12254 571 11806 28585 33172 33172 1 LGITNLCVIGGDGSLTGANLFR Unmodified 2247.1682 0.16815132 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 10.5 1.12 1 1 1 1 90.229 90.229 3 5.07E-22 29312 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.08 99.483 20.265 25.451 25.552 7.5198 63.924 47.411 19 24 24 7 63 46 1 2 2 1 4 3 45135 12255 2507 11807 28586;28587;28588;28589 33173;33174;33175;33176;33177 33174 5 LGIVLQEASYK Unmodified 1219.6812 0.68123863 597 B1AVH5;Q8C0P5 Coro2a Coronin;Coronin-2A yes no 0 0 0 0 9 0 1 73.949 73.949 2 0.00058988 24482 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.07 50.671 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12256 597 11808 28590 33178 33178 1 LGIYGCPYTSSILYFDGDDAISYR Unmodified 2745.2632 0.2632335 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 8 0 1 91.148 91.148 3 0.0014296 33087 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.918 27.926 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12257 1226 11809 28591 33179 33179 1 LGIYTVLFER Unmodified 1209.6758 0.67575932 2957 Q9CR62;Q5SX46;Q5SX48 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 11 0 1 85.032 85.032 2 0.01917 26655 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.931 35.959 0 9.576 0 0 48.116 0 0 9 0 0 46 0 0 1 0 0 1 0 17696 12258 2957 11810 28592 33180 33180 1 LGLALNYSVFYYEIQNAPEQACHLAK Unmodified 3011.4851 0.48512836 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 11 1.1 2 2 1 90.761 90.761 3;4 4.6704E-29 29094 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.65 104.1 39.701 29.792 12.984 107.16 74.817 142.77 37 28 12 99 74 135 1 2 1 4 3 6 51318 12259 1706 11811 28593;28594;28595;28596;28597 33181;33182;33183;33184;33185;33186;33187;33188;33189;33190 33186 10 LGLDEFNFIK Unmodified 1194.6285 0.62847478 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 8.5 0.5 1 1 84.253 84.253 2 0.0023761 30036 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.18 47.404 20.207 0 48.561 49.183 0 0 19 0 47 46 0 0 1 0 2 1 0 0 6905.1 12260 1388 11812 28598;28599 33191;33192 33191 2 LGLDFPNLPYLIDGSHK Unmodified 1897.9938 0.993799 1347;696 P10649;A2AE89;F6Y363;A2AE91;Q8R5I6;D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YZ29;D3YX76;P15626 Gstm1;Gm6665;Gstm4;Gstm7;Gstm2 Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 7;Glutathione S-transferase Mu 2 no no 0 0 0 0 9.75 1.56 2 2 2 1 1 87.369 87.369 3;4 1.7654E-06 30646 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.78 81.944 294.18 295.72 238.6 210.27 298.31 300.87 276 300 235 199 296 288 5 7 5 5 5 6 163960 12261 1347;696 11813 28600;28601;28602;28603;28604;28605;28606;28607 33193;33194;33195;33196;33197;33198;33199;33200;33201;33202 33196 10 LGLDYEER Unmodified 993.47673 0.47672516 1179 O35129;F6QPR1;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 4.5 0.5 1 1 53.514 53.514 2 0.010869 17654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.741 43.339 127.59 223.72 232.34 103.69 73.742 224.95 120 222 232 102 74 213 1 2 2 1 1 2 24168 12262 1179 11814 28608;28609 33203;33204 33204 2 LGLGGPIGSGR Unmodified 982.55598 0.55597854 2051 Q5M8N4;A0A2I3BQS7 Sdr39u1 Epimerase family protein SDR39U1 yes no 0 0 0 0 9 0 1 55.558 55.558 2 0.0038365 15763 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.716 37.574 0 0 115.88 94.742 0 0 0 0 111 93 0 0 0 0 1 1 0 0 6251.4 12263 2051 11815 28610 33205 33205 1 LGLGIDEDDPTVDDTSAAVTEEMPPLEGDDDTSR Unmodified 3574.5628 0.56284173 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 1.67 0.471 1 2 85.68 85.68 4;5 1.2791E-14 30403 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.833 56.738 0 14.162 9.4283 0 0 9.462 0 14 9 0 0 9 0 2 1 0 0 2 14292 12264 1322 11816 28611;28612;28613 33206;33207;33208 33206 3 LGLGIDEDDPTVDDTSAAVTEEMPPLEGDDDTSRMEEVD Unmodified 4177.7839 0.78386948 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 1.5 0.5 1 1 89.503 89.503 4 2.8294E-17 31968 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.907 67.469 2.146 0 0 3.2459 1.7616 5.2797 2 0 0 3 2 5 1 0 0 1 1 1 6275.6 12265 1322 11817 28614;28615 33209;33210 33209 2 LGLGIDEDEVTAEEPSAAVPDEIPPLEGDEDASR Unmodified 3534.6373 0.63732731 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 5 4.74 1 1 1 1 86.1 86.1 4 1.9893E-37 28970 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.842 81.199 50.56 37.878 79.473 116.45 90.269 87.804 48 37 77 111 91 84 4 4 3 5 4 5 82676 12266 1354 11818 28616;28617;28618;28619 33211;33212;33213;33214;33215;33216;33217;33218;33219;33220 33214 10 LGLGLEFQA Unmodified 946.51238 0.51238239 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 86.707 86.707 2 0.0052741 33955 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.064 61.441 69.618 34.674 0 79.668 73.661 76.782 65 37 0 74 74 74 2 3 0 2 2 3 33211 12267 2097 11819 28620;28621;28622 33221;33222;33223 33223 3 LGLHSLR Unmodified 794.47627 0.47627165 1693;1833 P61205;Q8BSL7;P84078 Arf3;Arf2;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1 no no 0 0 0 0 9 0 1 41.45 41.45 2 0.021981 9432 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.76 52.465 0 155.08 143.08 174 0 205.74 0 148 148 167 0 193 0 1 1 1 0 1 21284 12268 1693;1833 11820 28623 33224 33224 1 LGLHYVVYSGLENIR Unmodified 1731.9308 0.93080481 673 Q8K2T1;D3YU12;G5E8S7 Nmral1 NmrA-like family domain-containing protein 1 yes no 0 0 0 0 10.5 0.5 1 1 70.039 70.039 3 0.00075036 19929 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.185 46.417 0 48.944 0 49.219 56.315 0 0 46 0 46 56 0 0 1 0 1 1 0 9692 12269 673 11821 28624;28625 33225;33226 33226 2 LGLIPEEFFQFLYPK Unmodified 1839.9811 0.98110904 2937 Q9CQQ7 Atp5f1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 0 0 0 0 11.6 1.02 1 1 2 1 111.83 111.83 3;4 1.3195E-05 44491 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.912 55.437 8.5048 4.5891 67.429 52.411 7.9212 37.227 8 5 63 52 8 35 1 1 5 2 2 4 21570 12270 2937 11822 28626;28627;28628;28629;28630 33227;33228;33229;33230;33231;33232;33233 33233 7 LGLMEMIAFAK Unmodified 1222.6454 0.64538717 1994;1368 Q3ULJ0;P13707;E0CXN5 Gpd1l;Gpd1 Glycerol-3-phosphate dehydrogenase 1-like protein;Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] no no 0 0 0 0 12 0.707 1 2 1 95.541 95.541 2;3 6.2645E-08 27361 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 118.18 85.337 75.013 115.36 103.77 84.954 17.145 175.68 70 111 102 80 19 167 3 3 2 4 1 8 12689 12271 1994;1368 11823 28631;28632;28633;28634 33234;33235;33236;33237;33238;33239;33240;33241 33240 8 LGLPGLATFGYSLSGK Unmodified 1579.861 0.86099391 2163 Q62470 Itga3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain yes yes 0 0 0 0 12 0 1 89.433 89.433 3 0.00023493 25437 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.52 48.975 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 2438.3 12272 2163 11824 28635 33242 33242 1 LGLQDGKEYLFQAK Unmodified 1608.8512 0.8511575 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 8 0 1 70.575 70.575 3 0.0047956 23597 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.569 24.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12273 2186 11825 28636 33243 33243 1 LGLQHLR Unmodified 835.50282 0.50282075 1834 P84084 Arf5 ADP-ribosylation factor 5 yes yes 0 0 0 0 10.5 0.5 1 1 41.531 41.531 3 0.003836 8400 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.74 45.029 69.229 61.727 58.219 0 84.191 76.482 65 65 56 0 83 74 1 2 1 0 1 1 14007 12274 1834 11826 28637;28638 33244;33245 33244 2 LGLQNDLFSLAR Unmodified 1345.7354 0.73539946 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10 0.816 1 1 1 80.318 80.318 2;3 1.7251E-22 27497 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 164.31 111.44 177.86 62.656 205.2 268.45 186.34 154.24 167 65 205 260 195 148 2 2 3 3 3 2 52520 12275 1899 11827 28639;28640;28641 33246;33247;33248 33246 3 LGLSIPDLTPK Unmodified 1152.6754 0.67542497 2031 Q4VAE3 Tmem65 Transmembrane protein 65 yes yes 0 0 0 0 9.5 0.5 1 1 78.842 78.842 3 0.0009991 24467 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.595 42.252 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 3375.7 12276 2031 11828 28642;28643 33249;33250 33250 2 LGLSLVVPGGGIK Unmodified 1208.7493 0.74925861 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7.29 5.47 3 1 2 1 79.55 79.55 2;3 3.468E-15 27767 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 139.15 103.8 163.37 112 108.63 18.117 232.1 149.81 153 111 106 19 226 143 3 4 3 1 5 4 217670 12277 775 11829 28644;28645;28646;28647;28648;28649;28650 33251;33252;33253;33254;33255;33256;33257;33258;33259 33251 9 LGLSTLGELK Unmodified 1029.607 0.60701105 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 0 9 0 1 73.181 73.181 2 0.0014071 24132 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.906 44.48 0 59.584 0 79.729 61.312 87.794 0 56 0 74 65 84 0 1 0 1 1 1 7978.5 12278 524 11830 28651 33260 33260 1 LGLVFDDVVGIVEIINSR Unmodified 1957.0884 0.088427662 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 13 0 1 123.59 123.59 3 1.0365E-05 45609 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.188 40.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1276.9 12279 1536 11831 28652 33261 33261 1 LGLVGWVQNTDR Unmodified 1356.715 0.71499837 1635 P56376;E9QJT5 Acyp1 Acylphosphatase-1;Acylphosphatase yes no 0 0 0 0 10 0.816 1 1 1 73.243 73.243 2 1.1678E-12 22082 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.97 75.846 143.38 0 115.17 163.8 107.99 67.502 134 0 111 158 111 65 2 0 2 3 2 1 29933 12280 1635 11832 28653;28654;28655 33262;33263;33264 33263 3 LGMLNTVSK Unmodified 961.52665 0.52665224 169 J3QQ44;A0A0R4J0B8;Q62421 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 11 0 1 62.547 62.547 2 0.0144 16744 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.056 30.908 78.647 72.336 65.593 0 0 0 74 74 65 0 0 0 1 1 1 0 0 0 5299.9 12281 169 11833 28656 33265 33265 1 LGNAGIAALCPGLLLPSCK Unmodified 1924.0274 0.027424085 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 10 0 1 86.272 86.272 3 2.3776E-05 27642 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.062 51.061 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2901.8 12282 2741 11834 28657 33266 33266 1 LGNASETHSSAR Unmodified 1228.5796 0.5796271 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 5.5 0.5 1 1 24.968 24.968 3 0.00011961 4280 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.358 64.034 0 0 20.185 8.3658 14.26 0 0 0 19 9 14 0 0 0 1 1 1 0 1866.1 12283 885 11835 28658;28659 33267;33268 33267 2 LGNDFMGITLASSQAVSNAR Unmodified 2051.0106 0.010588046 2899 Q9CPV4;E9Q197;F6ZTG3;F7BB55 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 10 0 1 79.668 79.668 3 0.00018437 24887 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.055 31.222 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12284 2899 11836 28660 33269 33269 1 LGNNALLLNSVMSAFR Unmodified 1718.9138 0.91377454 699 D3YW20;D3YW19;I1E4X5;Q8BWQ6 9030624J02Rik UPF0505 protein C16orf62 homolog yes no 0 0 0 0 12 0 1 93.343 93.343 3 0.028083 26865 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 34.395 29.847 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1175.5 12285 699 11837 28661 33270 33270 1 LGNREDPLPQDSFEGVDEDEWD Unmodified 2561.083 0.083020526 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 1 1.5 0.5 1 1 75.561 75.561 3 1.7875E-15 27238 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.684 81.831 5.365 0 0 0 5.1618 1.9847 5 0 0 0 5 2 1 0 0 0 1 1 1108.9 12286 3053 11838 28662;28663 33271;33272 33272 2 LGNTQGIISAFSTIMSVHR Unmodified 2031.0571 0.057144309 3110 Q9DB20;F7D3P8;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 6.5 5.5 2 2 89.1 89.1 3;4 5.2304E-08 31358 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.413 76.872 3.204 2.976 19 0 0 9 3 3 19 0 0 9 1 1 1 0 0 1 7334.9 12287 3110 11839 28664;28665;28666;28667 33273;33274;33275;33276 33273 4 LGPAGNK Unmodified 655.36532 0.36532422 2030 Q4VA93 Prkca Protein kinase C yes yes 0 0 0 0 8.33 0.471 2 1 40.298 40.298 2;3 0.019623 9333 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.65 22.594 334.33 0 254.81 180.58 186.85 341.12 313 0 244 182 195 325 3 0 1 1 2 3 33937 12288 2030 11840 28668;28669;28670 33277;33278;33279 33277 3 LGPDDPNVAK Unmodified 1024.5189 0.51892433 923;717 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;Q91YS4;D3YXZ3;O88448 Klc1;Klc2 Kinesin light chain 2 no no 0 0 0 0 5 0 1 50.282 50.282 3 0.0094852 16066 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.278 23.88 48.924 86.077 0 60.189 54.18 47.49 46 84 0 56 56 46 1 1 0 1 1 1 5823.7 12289 923;717 11841 28671 33280 33280 1 LGPGGLDPVEVYESLPEELQK Unmodified 2268.1525 0.15254406 2107 Q61081 Cdc37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed yes yes 0 0 0 0 5.67 0.471 1 2 92.829 92.829 3;4 2.377E-11 34898 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.413 86.749 55.475 23.519 18.798 29.205 14.826 12.369 55 23 19 28 15 12 2 2 1 2 1 1 11518 12290 2107 11842 28672;28673;28674 33281;33282;33283 33281 3 LGPGVSDICK Unmodified 1044.5274 0.52738052 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 8.5 2.69 1 1 1 1 56.011 56.011 2 0.010811 19228 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.347 33.126 99.426 72.032 0 59.804 74.657 0 93 74 0 56 74 0 1 1 0 1 1 0 6541.6 12291 859 11843 28675;28676;28677;28678 33284;33285;33286;33287 33287 4 LGPIPFFSLLQYD Unmodified 1508.7915 0.79151736 1323 P08030 Aprt Adenine phosphoribosyltransferase yes yes 0 0 0 0 12 0.816 1 1 1 119.16 119.16 2 0.00051377 45279 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.676 59.078 11.767 0 12.513 17.129 6.276 0 11 0 12 16 6 0 2 0 2 2 1 0 10476 12292 1323 11844 28679;28680;28681 33288;33289;33290;33291;33292 33292 5 LGPLALPEDHYER Unmodified 1508.7623 0.7623425 1018 F7BJK1 Pcdh1 no no 0 0 0 0 6 0 1 60.026 60.026 3 0.00062236 20194 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.563 52.607 29.652 46.501 26.534 18.474 37.853 0 28 46 28 19 37 0 1 1 1 1 1 0 10839 12293 1018 11845 28682 33293 33293 1 LGPLVEQGR Unmodified 967.54508 0.5450795 1325 P08226;A0A1B0GX15;G3UWN5 Apoe Apolipoprotein E yes no 0 0 0 0 8 0 1 53.288 53.288 2 0.00071231 15393 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.32 37.225 187.38 133.03 133.38 181.74 142.21 123.86 176 139 139 176 148 120 1 1 1 1 1 1 13407 12294 1325 11846 28683 33294 33294 1 LGPNEQYK Unmodified 947.47125 0.47124585 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 0 8.5 2.69 1 1 1 1 46.155 46.155 2 0.0021605 14176 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 129.47 75.309 248.3 803.2 1042.1 756.89 500.34 469.34 234 787 1040 743 501 444 2 4 4 3 3 2 113490 12295 2157 11847 28684;28685;28686;28687 33295;33296;33297;33298 33298 4 LGPNYLQIPVNCPYR Unmodified 1802.9138 0.91377454 1442 P24270 Cat Catalase yes yes 0 0 0 0 9 0 1 72.434 72.434 3 0.042595 23845 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.304 18.273 0 0 0 71.045 0 78.884 0 0 0 65 0 74 0 0 0 1 0 1 2409.2 12296 1442 11848 28688 33299 33299 1 LGPSDYFGEIALLLNRPR Unmodified 2030.0949 0.094910023 745 D3Z0V6;P12849 Prkar1b cAMP-dependent protein kinase type I-beta regulatory subunit yes no 0 0 0 1 10.5 0.5 1 1 91.066 91.066 3 5.4169E-19 29685 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.01 118.14 30.044 0 0 0 24.058 19 28 0 0 0 23 19 1 0 0 0 1 1 7276.6 12297 745 11849 28689;28690 33300;33301 33300 2 LGPSDYFGEIALLMNRPR Unmodified 2048.0513 0.051330649 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 1 9.5 0.5 1 1 87.499 87.499 3 1.1927E-06 28155 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.181 75.086 0 29.792 0 55.881 50.779 0 0 28 0 52 51 0 0 1 0 2 2 0 7250.8 12298 3119 11850 28691;28692 33302;33303 33303 2 LGPYNEELR Unmodified 1089.5455 0.54547343 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 5 0 1 52.803 52.803 2 0.040992 17253 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.859 23.472 59.433 54.51 63.818 66.05 63.334 47.229 56 56 65 65 65 46 1 1 1 1 1 1 8112.6 12299 3039 11851 28693 33304 33304 1 LGQLFQGPGR Unmodified 1071.5825 0.58252764 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 10 0 1 64.56 64.56 2 0.01669 17954 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.589 35.958 198.39 150.5 253.18 212.25 0 220.66 187 158 252 208 0 207 1 1 1 1 0 1 19836 12300 1275 11852 28694 33305 33305 1 LGQLPPEDYVVVVK Unmodified 1554.8657 0.86574494 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 7 0 1 77.294 77.294 3 5.1312E-05 27412 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.262 57.187 98.256 35.278 47.409 48.313 104.47 69.29 92 37 46 46 102 65 2 1 1 1 1 1 3218.1 12301 3261 11853 28695 33306;33307 33307 2 LGQSDPAPLQHQVDIYQK Unmodified 2036.0327 0.032703697 1537 P40142 Tkt Transketolase yes yes 0 0 0 0 5.33 0.471 2 1 58.959 58.959 3;4 2.1321E-35 19503 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 148.36 129.07 148.28 117.97 46.304 149.17 0 148.17 139 121 46 139 0 139 2 2 1 3 0 3 23468 12302 1537 11854 28696;28697;28698 33308;33309;33310 33310 3 LGQSVVADQLK Unmodified 1156.6452 0.64518747 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 0 0 0 7 0 1 59.932 59.932 3 0.0015577 19273 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.235 33.058 0 67.898 75.475 35.943 0 0 0 65 75 37 0 0 0 1 1 1 0 0 3484.9 12303 1603 11855 28699 33311 33311 1 LGQVVEDK Unmodified 886.476 0.47599688 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 6 0 1 53.564 53.564 2 0.010928 17047 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.502 43.506 0 67.453 102.14 93.876 89.649 96.58 0 65 102 93 93 93 0 1 1 1 1 1 5028.3 12304 2054 11856 28700 33312 33312 1 LGSGPDGEPTIR Unmodified 1197.599 0.59896556 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 7 3.54 1 1 1 1 48.686 48.686 2 1.5918E-07 15411 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.4 84.371 356.34 190.95 181.56 184.75 153.92 204.52 334 203 185 176 158 195 5 4 4 3 3 3 51498 12305 1783 11857 28701;28702;28703;28704 33313;33314;33315;33316;33317 33317 5 LGSIFGLGLAYAGSNR Unmodified 1594.8467 0.84674083 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 1 0 1 88.223 88.223 3 0.00072134 31434 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.522 30.477 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 1472.8 12306 2697 11858 28705 33318 33318 1 LGSQHSPGR Unmodified 937.47298 0.47297719 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 0 0 0 0 7 0.816 1 1 1 23.89 23.89 3 0.00025329 3743 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.867 53.629 0 24.472 0 15.302 0 42.64 0 23 0 14 0 40 0 2 0 1 0 2 5468.6 12307 634 11859 28706;28707;28708 33319;33320;33321 33319 3 LGSTAPQVLNTSSPAQQAENEAK Unmodified 2340.1557 0.15573196 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6 0 1 60.29 60.29 3 2.6214E-16 20247 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.352 82.582 29.844 17.895 18.458 19.667 0 9.594 28 19 19 19 0 9 1 1 1 1 0 1 3451.6 12308 3000 11860 28709 33322 33322 1 LGSTVFVANLDYK Unmodified 1425.7504 0.75038083 3020 Q9D0E1;B8JK33;B8JK32;F6W322 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 9 0 1 76.202 76.202 3 0.058981 25476 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.265 8.8834 59.511 34.219 67.977 0 0 0 56 37 65 0 0 0 1 1 1 0 0 0 8658.2 12309 3020 11861 28710 33323 33323 1 LGTAAIQGAIEK Unmodified 1170.6608 0.66083754 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 63.359 63.359 2;3 2.9074E-12 20897 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.03 65.562 246.69 110.34 242.4 125.07 229.93 328.16 231 111 232 130 232 314 2 2 2 2 2 3 53868 12310 2622 11862 28711;28712;28713 33324;33325;33326 33324 3 LGTEDVYEK Unmodified 1052.5026 0.50260556 3445 yes yes 0 0 0 0 5 0 1 44.048 44.048 3 0.022736 13223 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.283 17.455 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 31840 + 12311 3445 11863 28714 33327 33327 1 LGTEEFPLIDQTFYPNHK Unmodified 2148.0528 0.052770437 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7.88 3.1 2 2 1 1 2 78.698 78.698 3;4 5.8428E-46 28931 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 154.46 122.94 456.35 452.03 425.37 418.56 554.55 501.83 429 454 426 410 556 483 9 9 7 8 8 7 148110 12312 1282 11864 28715;28716;28717;28718;28719;28720;28721;28722 33328;33329;33330;33331;33332;33333;33334;33335;33336;33337;33338 33331 11 LGTLSALDILIK Unmodified 1255.7751 0.77513901 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 11 0.816 1 1 1 93.538 93.538 2;3 1.4352E-07 30494 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.16 62.73 60.088 29.792 0 60.115 65.807 58.36 56 28 0 55 65 56 2 1 0 1 2 2 21150 12313 2264 11865 28723;28724;28725 33339;33340;33341;33342 33339 4 LGTPQQIAIAR Unmodified 1166.6772 0.6771563 2057;2282 Q7TMB8;A0A0R4J119;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 7.5 0.5 1 1 55.289 55.289 2 0.0015534 16410 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.821 43.592 108.49 110.74 66.763 0 114.83 67.685 102 112 65 0 112 65 2 2 1 0 2 1 21059 12314 2282;2057 11866 28726;28727 33343;33344 33344 2 LGTPVLQALGDGDFIK Unmodified 1642.893 0.89302232 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39;A0A2I3BRX1;A0A2I3BQC6 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 9 0 1 88.073 88.073 3 0.00026524 31100 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.681 43.018 29.952 18.196 0 30.604 0 0 28 19 0 28 0 0 1 1 0 1 0 0 3183.2 12315 172 11867 28728 33345 33345 1 LGTQPYFFNK Unmodified 1213.6132 0.61315906 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 10 0.816 1 1 1 69.339 69.339 2;3 0.00018851 20309 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.044 66.173 69.557 37.355 0 140.37 91.315 67.749 65 37 0 130 93 65 2 1 0 3 2 1 30799 12316 1265 11868 28729;28730;28731 33346;33347;33348 33347 3 LGTVADCGVPEAR Unmodified 1343.6503 0.65034921 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 7.25 3.34 2 1 1 52.353 52.353 2;3 0.00036842 17139 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.839 67.901 353.17 264.1 471.36 104.53 206.23 269.43 333 278 454 102 203 254 4 4 3 1 3 2 33098 12317 2469 11869 28732;28733;28734;28735 33349;33350;33351;33352 33350 4 LGVAGQWR Unmodified 885.48209 0.48208531 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 8.67 3.77 1 1 1 1 1 1 53.274 53.274 2 0.0038846 12746 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.9 77.851 864.88 829.54 1104.8 798.1 1209 916.37 813 840 1096 799 1221 892 5 5 6 5 6 6 683420 12318 3302 11870 28736;28737;28738;28739;28740;28741 33353;33354;33355;33356;33357;33358;33359 33358 7 LGVCANGLLIYK Deamidation (N) 1320.7112 0.71115855 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 1 0 0 9 0 1 77.368 77.368 2 3.0264E-10 26085 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.89 69.25 0 0 39.244 17.74 36.568 38.399 0 0 37 19 37 37 0 0 1 1 1 1 2953.8 12319 1250 11871 28742 33360 33360 342 1 LGVDTIAK Unmodified 815.47527 0.4752686 2888 Q99PL6;B8JJA4 Ubxn6 UBX domain-containing protein 6 yes no 0 0 0 0 7 0 1 57.24 57.24 2 0.050541 17973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.419 12.353 0 0 85.993 85.594 0 88.478 0 0 83 83 0 83 0 0 1 1 0 1 4934 12320 2888 11872 28743 33361 33361 1 LGVEPSHDDCVSVQHVCTIVSFR Unmodified 2640.2425 0.24245525 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 6 0 1 62.507 62.507 4 3.1631E-16 21315 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.849 79.833 0 0 0 0 46.111 58.38 0 0 0 0 46 56 0 0 0 0 1 1 9347.2 12321 1055 11873 28744 33362 33362 1 LGVLGFLSTGDQAAK Unmodified 1475.7984 0.79839365 2191 Q69ZK9;F6VE93;E9QK34;Q99K10;B0F2B4 Nlgn2;Nlgn1;Nlgn4l Neuroligin-2;Neuroligin-1;Neuroligin 4-like yes no 0 0 0 0 11.5 0.5 1 1 83.905 83.905 2;3 6.115E-16 26202 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.35 75.963 0 88.312 0 0 67.99 0 0 83 0 0 65 0 0 1 0 0 1 0 7748.5 12322 2191 11874 28745;28746 33363;33364 33363 2 LGVLHVGQK Unmodified 949.5709 0.57090032 3160 Q9EP69 Sacm1l Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 0 11 0 1 51.251 51.251 3 0.00059012 12137 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.47 47.749 0 0 160.14 0 0 168.43 0 0 148 0 0 158 0 0 1 0 0 1 12358 12323 3160 11875 28747 33365 33365 1 LGVQVVITDPEKLDQIR Unmodified 1922.0837 0.083676635 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 1 7.5 0.5 1 1 73.183 73.183 3 0.007226 24772 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.764 23.375 103.25 65.048 84.114 28.471 0 98.072 97 69 83 28 0 92 2 2 2 1 0 2 10719 12324 1356 11876 28748;28749 33366;33367 33367 2 LGVTADDVK Unmodified 916.48656 0.48656157 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 53.449 53.449 2;3 2.3927E-05 17695 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.92 83.718 1551.5 1073.1 1506 1397 1487.5 1313.8 1458 1125 1504 1382 1520 1270 5 5 5 6 5 6 408040 12325 1373 11877 28750;28751;28752;28753;28754;28755 33368;33369;33370;33371;33372;33373;33374 33368 7 LGWDPKPGEGHLDALLR Unmodified 1872.9846 0.98463129 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 10 2.16 1 1 1 67.202 67.202 4 6.9065E-05 24232 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.727 47.339 138.41 84.289 109.97 49.624 34.772 175.96 130 83 102 46 37 166 2 1 1 1 1 2 26656 12326 1899 11878 28756;28757;28758 33375;33376;33377 33377 3 LGWVRPDLGQLSK Unmodified 1467.8198 0.8197978 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 1 9.67 3.99 1 1 2 1 1 69.274 69.274 2;3 2.6279E-11 19617 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.156 54.26 138.06 722.46 588.58 383.9 654.77 322.25 130 697 578 362 637 306 1 6 3 4 4 3 216430 12327 3145 11879 28759;28760;28761;28762;28763;28764 33378;33379;33380;33381;33382;33383;33384 33382 7 LGYAGNTEPQFIIPSCIAIK Unmodified 2191.1347 0.13472593 2836 Q99JY9;A0A087WRA1;A0A087WQ14 Actr3 Actin-related protein 3 yes no 0 0 0 0 9.8 1.94 2 1 1 1 85.611 85.611 3;4 5.8524E-09 30717 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.871 61.565 119.43 93.527 46.214 30.604 103.39 116.44 112 93 46 28 102 112 4 2 1 1 3 4 32705 12328 2836 11880 28765;28766;28767;28768;28769 33385;33386;33387;33388;33389 33386 5 LGYFAEVLFDTCGITDR Unmodified 1975.935 0.93496349 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9 0 1 101.59 101.59 3 2.7782E-05 36022 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.919 57.228 5.34 4.9599 0 0 0 0 5 5 0 0 0 0 1 1 0 0 0 0 1130.8 12329 1226 11881 28770 33390 33390 1 LGYILTCPSNLGTGLR Unmodified 1733.9134 0.91344018 1490 P30275;Q6P8J7 Ckmt1;Ckmt2 Creatine kinase U-type, mitochondrial;Creatine kinase S-type, mitochondrial yes no 0 0 0 0 8 5.01 3 1 2 2 1 79.16 79.16 2;3 4.6922E-25 27500 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.65 113.96 611.62 749.08 262.51 432.99 287.42 670.56 573 741 260 404 284 635 10 12 5 6 7 8 785310 12330 1490 11882 28771;28772;28773;28774;28775;28776;28777;28778;28779 33391;33392;33393;33394;33395;33396;33397;33398;33399;33400;33401;33402;33403;33404;33405;33406 33392 16 LGYISVVDTLK Unmodified 1206.686 0.68598966 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank3;Ank2 Ankyrin-3;Ankyrin-2 no no 0 0 0 0 10.7 1.7 1 1 1 79.421 79.421 2 1.733E-08 27097 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.98 21.692 158.16 67.415 211.87 167.73 115.56 203.51 148 65 204 167 120 194 2 1 2 3 2 3 25053 12331 3450;3449;3451;3452 11883 28780;28781;28782 33407;33408;33409 33407 3 LGYTPLIVACHYGNVK Unmodified 1803.9342 0.93417563 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 10.8 0.829 2 1 1 67.606 67.606 3;4 6.0898E-33 18844 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 145.52 105.41 191.95 192.85 75.458 37.306 254.29 38.155 180 194 74 37 246 37 2 2 2 1 3 1 58361 12332 3449;3451;3452 11884 28783;28784;28785;28786 33410;33411;33412;33413 33412 4 LHAATTK Unmodified 740.41809 0.41808807 3376 Q9Z1G3;A0A2I3BPD0;A0A2I3BQD9 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 10 2.16 1 1 1 31.602 31.602 2;3 0.004312 5485 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.76 67.156 14.932 0 768.12 0 575.3 0 14 0 724 0 550 0 1 0 3 0 1 0 50268 12333 3376 11885 28787;28788;28789 33414;33415;33416 33415 3 LHALVVGPGLGR Unmodified 1187.7139 0.71387616 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 6 5 1 1 55.935 55.935 3 0.00021345 13738 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.922 56.449 281.62 53.967 411.91 0 401.44 67.416 265 56 385 0 386 65 2 1 2 0 2 1 45027 12334 1142 11886 28790;28791 33417;33418 33418 2 LHDAFFK Unmodified 876.44939 0.4493882 1990 Q3UJB0 Sf3b2 yes yes 0 0 0 0 8.5 0.5 1 1 55.127 55.127 3 0.026645 15436 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.167 28.829 49.128 45.631 0 89.695 54.456 0 46 46 0 83 56 0 1 1 0 1 1 0 3528.9 12335 1990 11887 28792;28793 33419;33420 33420 2 LHDAIVEVVTCLLR Unmodified 1636.8971 0.89706184 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 11.8 0.433 1 3 96.2 96.2 3 0.00010058 31304 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.467 81.919 20.387 0 0 9.837 0 0 19 0 0 9 0 0 1 0 0 1 0 0 10925 12336 815;2590 11888 28794;28795;28796;28797 33421;33422;33423;33424 33421 4 LHDALSAK Unmodified 853.46577 0.46576654 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 10 3 1 1 43.045 43.045 3 0.0023583 11481 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.069 43.326 177.69 562.74 562.96 636.89 674.14 747.22 167 549 570 625 697 719 1 3 2 3 3 3 45929 12337 1857 11889 28798;28799 33425;33426;33427 33426 3 LHDDPPQKPPR Unmodified 1298.6731 0.67313356 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R235 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 1 9 4 1 1 33.859 33.859 4 0.0302 8126 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.639 21.404 166.25 172.28 225.7 74.699 202.68 211.68 157 176 222 74 204 204 2 2 2 1 2 2 18765 12338 3447 11890 28800;28801 33428;33429 33429 2 LHDFGYR Unmodified 906.4348 0.43480077 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 7 0 1 43.294 43.294 3 0.020384 11354 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.757 46.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2885.4 12339 2848 11891 28802 33430 33430 1 LHDINAQLVEDQGFLDTLK Unmodified 2168.1113 0.11134795 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 6 0 1 80.805 80.805 3 0.013144 29881 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.329 19.023 0 0 38.379 37.153 53.187 107.21 0 0 37 37 56 102 0 0 1 1 1 1 2847.3 12340 1203 11892 28803 33431 33431 1 LHDINAQMVEDQGFLDSLR Unmodified 2200.0583 0.05826652 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 5.8 0.748 2 2 1 75.972 75.972 3;4 3.0758E-10 28294 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.6 84.779 60.785 74.637 0 140.9 91.074 97.665 57 74 0 130 94 94 3 3 0 4 4 4 37501 12341 3123 11893 28804;28805;28806;28807;28808 33432;33433;33434;33435;33436;33437 33432 6 LHDVELHQVAER Unmodified 1444.7423 0.74227576 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 7.33 4.03 1 1 1 40.592 40.592 4 5.8272E-05 11274 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.911 68.453 128.12 46.934 67.536 107.15 74.782 37.308 120 46 65 103 74 37 3 1 1 3 1 1 23238 12342 1752 11894 28809;28810;28811 33438;33439;33440 33440 3 LHEENFEVTTLR Unmodified 1486.7416 0.74160705 2589 Q8K1J6;A0A0N4SUW4 Trnt1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 53.702 53.702 3 0.0025899 18051 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.524 32.967 30.044 0 0 49.237 75.217 28.269 28 0 0 46 75 28 1 0 0 1 2 1 7761 12343 2589 11895 28812;28813 33441;33442 33441 2 LHEICCSWVK Unmodified 1330.6162 0.61621231 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 8.5 0.5 1 1 56.568 56.568 3 0.00035315 16977 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.681 66.922 108.89 110.76 0 77.737 167.21 113.55 102 111 0 74 167 111 1 1 0 1 1 1 11296 12344 2302 11896 28814;28815 33443;33444 33443 2 LHFFMPGFAPLTAR Oxidation (M) 1619.8283 0.82825399 3183;2805 Q922F4;Q9ERD7 Tubb6;Tubb3 Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 1 0 6.5 5.5 1 1 72.578 72.578 3 0.0045429 24716 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.001 26.375 39.588 0 19.068 28.96 109.96 29.079 37 0 19 28 111 28 1 0 1 1 2 1 39107 12345 2805;3183 11897 28816;28817 33445;33446 33445 184 2 LHFFMPGFAPLTAR Unmodified 1603.8333 0.83333937 3183;2805 Q922F4;Q9ERD7 Tubb6;Tubb3 Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 13 0 1 79.587 79.587 3 0.00020944 30582 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.314 48.343 39.468 75.619 27.275 67.883 81.684 58.686 37 74 28 65 83 56 1 2 1 2 2 1 50654 12346 2805;3183 11897 28818 33447;33448 33447 2 LHFFMPGFAPLTSR Oxidation (M) 1635.8232 0.82316861 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 1 0 3.88 4.99 6 1 1 75.905 75.905 3 2.3811E-17 18515 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.48 110.39 419.74 294.72 359.31 233.06 452.26 378.2 394 300 348 230 449 362 9 7 8 6 7 6 291250 12347 1863;1795;2283;2975;3072 11898 28819;28820;28821;28822;28823;28824;28825;28826 33449;33450;33451;33452;33453;33454;33455;33456;33457;33458;33459;33460;33461;33462;33463 33461 149 15 LHFFMPGFAPLTSR Unmodified 1619.8283 0.82825399 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 0 0 8.5 5.35 2 1 1 2 81.291 81.291 2;3 1.2617E-11 30583 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.52 82.959 197.75 70.241 117.93 43.045 195.76 241.5 185 75 112 42 195 231 4 3 3 2 5 6 311250 12348 1863;1795;2283;2975;3072 11898 28827;28828;28829;28830;28831;28832 33464;33465;33466;33467;33468;33469;33470;33471 33470 8 LHFGHNR Unmodified 879.44637 0.44636851 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 9 0 1 28.072 28.072 3 0.012905 4371 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.355 53.624 34.074 51.966 0 45.906 39.939 55.358 32 51 0 42 40 53 1 1 0 1 1 1 2617.6 12349 2396 11899 28833 33472;33473 33472 2 LHFLMTGYTPLTTDQSVASVR Unmodified 2336.1835 0.18346703 1830 Q8VCK3;P83887 Tubg2;Tubg1 Tubulin gamma-2 chain;Tubulin gamma-1 chain yes no 0 0 0 0 12 0 1 74.398 74.398 3 5.3196E-11 19545 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.589 74.838 0 0 9.3245 9.2813 0 20.254 0 0 9 9 0 19 0 0 1 1 0 1 2662.6 12350 1830 11900 28834 33474 33474 1 LHGGTPANFLDVGGGATVQQVTEAFK Unmodified 2613.3187 0.31871496 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 8 0.894 2 1 2 79.757 79.757 3;4 1.5669E-24 28605 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.58 91.811 89.598 46.315 154.78 172.63 282.01 242.19 84 46 148 167 288 232 2 2 3 3 5 3 59063 12351 3397 11901 28835;28836;28837;28838;28839 33475;33476;33477;33478;33479;33480 33477 6 LHIAQDINQENLQLFLGSYNGR Deamidation (N) 2543.2769 0.27685015 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 0 1 0 0 7 0 1 82.206 82.206 3 7.1023E-09 29782 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.767 45.825 20.346 8.2041 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 2091.5 12352 2687 11902 28840 33481 33481 967 1 LHIIEVGTPPTGNQPFPK Unmodified 1944.0469 0.046897198 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.55 2.84 1 1 2 4 1 1 1 66.805 66.805 2;3;4;5 9.0288E-10 21267 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.43 94.748 441.11 436.69 580 295.77 800.95 717.97 416 438 560 287 799 697 5 6 4 5 7 9 393170 12353 2185 11903 28841;28842;28843;28844;28845;28846;28847;28848;28849;28850;28851 33482;33483;33484;33485;33486;33487;33488;33489;33490;33491;33492;33493;33494 33487 13 LHISMLALEK Unmodified 1153.6529 0.65291539 2537 Q8CGF6;A0A0G2JFW8 Wdr47 WD repeat-containing protein 47 yes no 0 0 0 0 10 0 1 67.541 67.541 3 0.01359 19385 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.194 30.582 39.296 0 68.073 46.221 0 49.036 37 0 65 46 0 46 1 0 1 1 0 1 3605.8 12354 2537 11904 28852 33495 33495 1 LHISPDR Unmodified 836.45045 0.45045083 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 0 0 0 8.4 3.07 1 1 1 1 1 36.024 36.024 3 0.001248 8784 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143 73.572 308.55 190.8 144.06 243.13 239.01 143.23 289 195 140 228 241 139 6 4 5 4 4 2 179540 12355 1510 11905 28853;28854;28855;28856;28857 33496;33497;33498;33499;33500;33501;33502 33497 7 LHKEEEVK Unmodified 1010.5397 0.53965977 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 12 0 1 45.175 45.175 4 0.016072 8474 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.546 19.3 755.42 520.61 816.92 791.83 0 830.41 711 550 820 769 0 779 1 1 1 1 0 1 38780 12356 2459 11906 28858 33503 33503 1 LHLDEDYPCSLVGNWNTWYGEQDQAVHLWR Unmodified 3700.6794 0.67936451 1237 O55125;Q5SVG6 Nipsnap1 Protein NipSnap homolog 1 yes no 0 0 0 0 13 0 1 84.96 84.96 4 0.033723 33298 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 23.887 13.649 0 0 40.034 0 48.116 0 0 0 37 0 46 0 0 0 1 0 1 0 6531.2 12357 1237 11907 28859 33504 33504 1 LHLIAQELPFDR Unmodified 1450.7932 0.79324869 863 E9PZ92;Q3TPX4 Exoc5 Exocyst complex component 5 yes no 0 0 0 0 8 0 1 70.689 70.689 3 0.00035433 23641 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.44 45.799 0 0 19.269 28.93 27.959 0 0 0 19 28 28 0 0 0 1 1 1 0 2393.1 12358 863 11908 28860 33505 33505 1 LHLLPGASK Unmodified 934.56 0.56000128 1561 P47708;P70169 Rph3a;Doc2b Rabphilin-3A;Double C2-like domain-containing protein beta yes no 0 0 0 0 11 0 1 52.239 52.239 2 0.023452 12566 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.962 32.813 0 48.944 0 0 0 59.696 0 46 0 0 0 56 0 1 0 0 0 1 5035.6 12359 1561 11909 28861 33506 33506 1 LHLPTAPPPLNEGESLVSR Unmodified 2026.0847 0.084739268 3449;3452 S4R2F3;S4R1J9;S4R2T7 Ank2 no no 0 0 0 0 6.5 0.5 1 1 68.902 68.902 3 8.9519E-06 23500 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.152 52.122 98.698 92.874 155.14 56.144 92.222 195.64 93 93 148 56 92 186 2 2 2 1 2 3 12265 12360 3449;3452 11910 28862;28863 33507;33508;33509 33509 3 LHLQSTDYGNFLANEASPLTVSVIDDK Unmodified 2946.4611 0.46108168 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 6.75 0.829 2 1 1 83.996 83.996 3;4 1.523E-21 30555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.122 72.481 79.281 57.152 58.692 29.725 85.453 20.254 74 56 56 28 83 19 2 2 2 1 2 1 26588 12361 1606 11911 28864;28865;28866;28867 33510;33511;33512;33513;33514;33515 33513 6 LHMQLQSK Unmodified 983.52224 0.52223557 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 11 0 1 45.383 45.383 3 0.027293 9807 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.607 20.352 89.059 0 0 90.719 0 88.478 83 0 0 83 0 83 1 0 0 1 0 1 11060 12362 1478 11912 28868 33516 33516 1 LHMSLKVQNDLEVSK Oxidation (M) 1755.9189 0.91891949 94 A0A0G2JEW9;Q9ESG6 P2ry14 P2Y purinoceptor 14 yes no 0 0 1 1 12 0 1 68.997 68.997 3 0.042642 17474 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.546 36.125 123.13 103.24 138.17 0 0 0 116 107 134 0 0 0 1 1 1 0 0 0 26014 12363 94 11913 28869 33517 33517 5 1 LHMSLQQGK Unmodified 1040.5437 0.54369929 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 10 0 1 45.961 45.961 3 0.0013266 10117 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.474 44.753 88.59 92.978 0 88.857 98.973 105.91 83 93 0 83 102 102 1 1 0 1 1 1 5584.4 12364 607 11914 28870 33518 33518 1 LHNMIVDLDNVVK Unmodified 1508.8021 0.80209882 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8.5 0.5 1 1 73.55 73.55 3 3.9215E-05 25012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.86 74.624 267.29 75.385 97.67 202.25 111.73 176.43 250 83 93 186 112 167 3 2 1 2 2 2 13267 12365 2517 11915 28871;28872 33519;33520;33521 33519 3 LHPDGTVLYGLR Unmodified 1339.7248 0.72483478 1774;1011 P63137;A0A0G2JGS8;P50571;F6WUM4;Q8C446;F6ZYH6;P63080 Gabrb2;Gabrb1;Gabrb3 Gamma-aminobutyric acid receptor subunit beta-2;Gamma-aminobutyric acid receptor subunit beta-1;Gamma-aminobutyric acid receptor subunit beta-3 no no 0 0 0 0 7.5 0.5 1 1 57.648 57.648 3 8.5974E-05 18185 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.522 54.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12366 1774;1011 11916 28873;28874 33522;33523 33522 2 LHPDPFLR Unmodified 993.5396 0.53960019 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7 0 1 51.365 51.365 3 0.0035185 15119 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.469 56.397 49.176 36.052 0 50.278 0 69.29 46 37 0 46 0 65 1 1 0 1 0 1 5401.2 12367 570 11917 28875 33524 33524 1 LHPEDFPEKEK Unmodified 1367.6721 0.67213051 2910 Q9CQ54 Ndufc2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes yes 0 0 0 1 6 0 1 49.584 49.584 4 0.0016248 15097 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.262 53.994 158.26 184.07 125.24 151.03 154.64 107.36 148 185 120 139 158 102 1 2 1 1 2 1 7954 12368 2910 11918 28876 33525;33526 33525 2 LHPHFSR Unmodified 892.46677 0.4667696 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 8 0 1 30.106 30.106 3 0.021924 5125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.306 40.287 0 59.584 0 70.041 53.361 58.173 0 56 0 65 56 56 0 1 0 1 1 1 5085.1 12369 1055 11919 28877 33527 33527 1 LHQECEK Unmodified 942.42292 0.42291545 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 5 0 1 30.823 30.823 3 0.0033825 6747 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.81 66.458 108.26 78.801 132.24 70.61 127.08 164.8 102 83 130 74 130 158 1 1 1 1 1 1 12559 12370 2137 11920 28878 33528 33528 1 LHQELGAK Unmodified 894.49232 0.49231565 1028 F8VPN4;A0A0G2JGI9;F6XXE6;F7CSZ6 Agl yes no 0 0 0 0 7 0 1 39.34 39.34 3 0.025912 9644 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.066 17.516 108.16 118.45 115.82 142.86 115.01 115.04 102 120 120 139 120 111 1 1 1 1 1 1 19417 12371 1028 11921 28879 33529 33529 1 LHQLDAEK Unmodified 952.49779 0.49779495 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 6 0 1 42.375 42.375 3 0.019087 11767 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.59 24.749 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12372 2178 11922 28880 33530 33530 1 LHQVYFDAPSCVK Unmodified 1562.7551 0.75514863 2149 Q62277;F6VR28 Syp Synaptophysin yes no 0 0 0 0 9.38 1.8 1 2 2 1 1 1 56.486 56.486 3;4 1.1365E-07 17042 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.42 85.087 1312.3 1180.2 1440.6 972.56 1495.7 1144.4 1235 1215 1438 964 1509 1102 6 7 6 5 7 3 402880 12373 2149 11923 28881;28882;28883;28884;28885;28886;28887;28888 33531;33532;33533;33534;33535;33536;33537;33538;33539 33534 9 LHQYDGSIVVIQNPAR Unmodified 1808.9533 0.95333116 2663 Q8R464 Cadm4 Cell adhesion molecule 4 yes yes 0 0 0 0 7.5 0.5 1 1 56.124 56.124 3 8.7338E-06 16720 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.093 58.081 69.509 0 39.684 0 46.111 58.38 65 0 37 0 46 56 1 0 1 0 1 1 6816.1 12374 2663 11924 28889;28890 33540;33541 33541 2 LHSGSEGQGDSR Unmodified 1228.5432 0.5432416 243 Q5SVL6;A0A171EBK8 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 0 4 0 1 20.982 20.982 3 0.00012856 3193 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.774 67.158 14.952 13.888 0 0 19.197 19.706 14 14 0 0 19 19 1 1 0 0 1 1 1406.4 12375 243 11925 28891 33542 33542 1 LHSILKPQVQK Unmodified 1289.782 0.78195573 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 1 8 4.97 1 1 1 50.498 50.498 3;4 1.7736E-08 16028 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.09 107.21 583.62 761.22 653.61 713.5 365.8 957.49 550 777 661 687 382 908 4 5 4 4 3 5 44413 12376 927 11926 28892;28893;28894 33543;33544;33545;33546;33547;33548 33545 6 LHSLFMSR Unmodified 989.51167 0.51167088 1078 G3X928;Q6NZC7 Sec23ip SEC23-interacting protein yes no 0 0 0 0 12 0 1 52.161 52.161 3 0.014377 11115 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.596 19.634 48.732 44.531 67.413 0 67.99 0 46 46 65 0 65 0 1 1 1 0 1 0 2351.4 12377 1078 11927 28895 33549 33549 1 LHSLLGDYYQAIK Unmodified 1519.8035 0.80347903 2624 Q8QZY1 Eif3l Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 0 10 0 1 71.315 71.315 3 0.012215 21127 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.382 10.885 0 0 87.838 44.176 46.087 0 0 0 83 46 46 0 0 0 1 1 1 0 5151.7 12378 2624 11928 28896 33550 33550 1 LHSLVKPSVDFVCR Unmodified 1655.8817 0.88174613 1292 O89112 Lancl1 LanC-like protein 1 yes yes 0 0 0 1 12 0 1 57.843 57.843 4 0.0079188 13293 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.177 30.81 0 144.71 190.35 171.18 232.72 0 0 139 191 171 230 0 0 1 1 1 1 0 12484 12379 1292 11929 28897 33551 33551 1 LHSQDPLLSPER Unmodified 1390.7205 0.72047768 1976 Q3UH99;F6VQZ6 Shisa6 Protein shisa-6 homolog yes no 0 0 0 0 5 0 1 46.821 46.821 3 0.046586 14456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.013 19.204 0 48.323 37.135 0 67.99 0 0 46 37 0 65 0 0 1 1 0 1 0 3172.2 12380 1976 11930 28898 33552 33552 1 LHSQEEDFR Unmodified 1159.5258 0.52580062 453 A2AEW8;Q8VD04 Gripap1 GRIP1-associated protein 1 yes no 0 0 0 0 3.5 0.5 1 1 35.651 35.651 3 0.00079068 10031 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.136 73.929 58.735 103.8 45.639 27.884 26.935 68.521 55 102 46 28 28 65 1 2 1 1 1 1 9073 12381 453 11931 28899;28900 33553;33554 33553 2 LHSSPVSSTLTSK Unmodified 1342.7092 0.70924429 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 9 0 1 45.87 45.87 3 0.0016217 11238 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.532 37.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12382 1275 11932 28901 33555 33555 1 LHSYATSIR Unmodified 1046.5509 0.55089316 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 10.5 2.06 1 1 1 1 38.048 38.048 2;3 0.00010588 8456 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.21 93.899 217.55 83.746 155.36 215.11 0 227.06 204 88 153 204 0 213 4 2 2 2 0 4 44376 12383 1814 11933 28902;28903;28904;28905 33556;33557;33558;33559 33556 4 LHSYWTLK Unmodified 1046.5549 0.5549159 123 A0A0N4SUS4;B2RRD7;A0A0N4SVG7;E9PXP1;Q80XK2;Q3U109;A0A0N4SUT9 Brpf1 yes no 0 0 0 0 12 0.707 1 2 1 37.259 37.259 3;4 0.0042536 6765 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.738 23.884 98.809 165.91 115.28 148.9 377.89 459.32 93 164 120 145 381 441 1 3 2 3 3 4 52721 12384 123 11934 28906;28907;28908;28909 33560;33561;33562;33563 33560 4 LHTCLLTSLPPLYR Unmodified 1682.9178 0.91779728 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 12 0 1 70.464 70.464 3 1.326E-05 17962 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.41 81.499 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 18816 12385 570 11935 28910 33564 33564 1 LHTNFLPLK Deamidation (N) 1082.6124 0.61243078 1000 F6TIN5;Q8K013 Gtpbp10 GTP-binding protein 10 yes no 0 1 0 0 9.5 0.5 1 1 38.782 38.782 4 0.02044 7281 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.563 7.7668 703.69 587 618.37 501.88 761.72 832.13 662 606 628 506 769 801 2 2 2 2 1 2 118650 12386 1000 11936 28911;28912 33565;33566 33566 264 2 LHTVQPK Unmodified 821.47594 0.4759373 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 0 11 2 1 1 35.413 35.413 3 0.0034083 6974 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.63 84.807 238.59 0 115.97 243.35 118.15 105.36 223 0 111 231 120 102 2 0 1 2 1 1 17330 12387 1183 11937 28913;28914 33567;33568 33567 2 LHVDPENFR Deamidation (N) 1126.5407 0.5407224 562;1299 A8DUK4;P02088;CON__Q3SX09;P02089 Hbbt1;Hbb-b1;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 1 0 0 4.33 0.471 2 1 51.434 51.434 3 0.0047721 16622 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.149 51.765 49.762 114.54 76.262 46.677 38.416 78.884 47 112 74 46 37 74 2 3 2 2 1 1 9638.7 12388 562;1299 11938 28915;28916;28917 33569;33570;33571 33569 162 3 LHVDPENFR Unmodified 1125.5567 0.55670682 562;1299 A8DUK4;P02088;CON__Q3SX09;P02089 Hbbt1;Hbb-b1;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 0 0 0 7.8 2.79 1 1 1 1 1 48.989 48.989 3 3.5416E-06 15029 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 148.52 118.86 571.55 553.87 434.06 456.95 674.9 502.12 537 557 435 445 676 481 7 6 5 6 6 5 557730 12389 562;1299 11938 28918;28919;28920;28921;28922 33572;33573;33574;33575;33576;33577;33578;33579 33575 8 LHYGLPVVVK Unmodified 1123.6754 0.67536539 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 11 0.816 1 1 1 61.382 61.382 3 0.0012538 16698 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.879 42.895 496.28 197.98 459.72 431.54 413.43 520.14 466 213 453 427 426 499 4 2 3 4 3 4 86927 12390 1878 11939 28923;28924;28925 33580;33581;33582;33583 33580 4 LHYNEGLNIK Unmodified 1199.6299 0.62987176 766 D3Z3A0;Q9DCL8 Ppp1r2 Protein phosphatase inhibitor 2 yes no 0 0 0 0 7 0 1 52.45 52.45 3 0.0012212 15683 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.327 32.443 88 80.543 109.79 113.11 88.764 96.605 83 83 111 111 93 93 1 1 1 1 1 1 5631 12391 766 11940 28926 33584 33584 1 LIAAAQAGLPVR Unmodified 1178.7135 0.71354181 457 B1AV20;A2AFI8;B9EI38 Reps2 yes no 0 0 0 0 10 0 1 64.76 64.76 3 0.0016399 18063 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.073 52.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12392 457 11941 28927 33585 33585 1 LIAALGAYTAQR Unmodified 1246.7034 0.70337105 1828 Q3UU93;P80560 Ptprn2 Receptor-type tyrosine-protein phosphatase N2 yes no 0 0 0 0 6.5 5.5 1 1 71.878 71.878 2;3 4.6073E-13 18400 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.12 98.174 40.263 36.803 54.69 78.353 53.345 47.514 38 38 56 74 56 46 2 2 2 1 1 1 11751 12393 1828 11942 28928;28929 33586;33587 33587 2 LIAEGTAPR Unmodified 926.51853 0.5185304 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 6.5 0.5 1 1 45.153 45.153 2 0.0041649 13060 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.696 35.06 99.377 81.611 0 118.94 126.91 105.11 93 83 0 111 130 102 1 1 0 1 1 1 8991.3 12394 2633 11943 28930;28931 33588;33589 33588 2 LIAEGTVTLQEFEEEIAK Unmodified 2019.0412 0.041202698 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 5 0.816 1 1 1 96.805 96.805 3 4.1806E-46 35624 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.49 134.48 8.5183 7.8644 4.3809 11.545 11.52 14.595 8 8 5 11 12 14 1 1 1 1 1 1 2322.3 12395 628 11944 28932;28933;28934 33590;33591;33592 33591 3 LIAFTSEHSHFSLK Unmodified 1615.8358 0.83584179 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 11 0 1 62.454 62.454 4 5.0352E-05 16664 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.734 75.383 0 67.727 85.743 0 0 0 0 65 83 0 0 0 0 1 1 0 0 0 7439 12396 1579 11945 28935 33593 33593 1 LIALSIDSVEDHLAWSK Unmodified 1895.9993 0.9992783 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 9 0 1 87.962 87.962 3 0.0069746 31110 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.088 12.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20732 12397 2194 11946 28936 33594 33594 1 LIANDDMAELLLGESK Unmodified 1730.8761 0.87605162 341 A0A1Y7VL44;E9Q6P5 Ttc7b yes no 0 0 0 0 6 0 1 90.044 90.044 3 6.9387E-06 33957 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.85 51.26 20.244 28.427 0 0 0 9.594 19 28 0 0 0 9 1 1 0 0 0 1 2094.2 12398 341 11947 28937 33595 33595 1 LIASISSRVSDIVK Unmodified 1486.8719 0.87189295 3418 yes yes 0 0 0 1 13 0 1 92.245 92.245 3 0.033455 36788 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.789 11.717 0 39.368 0 40.441 0 59.696 0 37 0 37 0 56 0 1 0 1 0 1 4050.4 + 12399 3418 11948 28938 33596 33596 1 LIASVADDEAAVPNNK Deamidation (N) 1626.8101 0.81008055 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 1 0 0 6 2.93 2 3 1 1 67.106 67.106 3;4 4.3863E-11 24008 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.24 100.73 217.86 147.29 321.81 318.52 337.45 269.94 205 149 316 315 343 261 6 4 6 7 7 5 51038 12400 1389 11949 28939;28940;28941;28942;28943;28944;28945 33597;33598;33599;33600;33601;33602;33603;33604 33600 457;458 8 LIASVADDEAAVPNNK Unmodified 1625.8261 0.82606496 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 7 2.56 2 2 2 1 64.624 64.624 3;4 4.1905E-17 22136 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.09 107.01 324.93 558.62 782.38 569.01 369.21 930.74 306 557 779 566 382 883 5 8 9 8 5 9 216860 12401 1389 11949 28946;28947;28948;28949;28950;28951;28952 33605;33606;33607;33608;33609;33610;33611;33612;33613 33608 9 LIAVIGDEDTVTGFLLGGIGELNK Unmodified 2443.321 0.32100637 3042 Q9D1K2 Atp6v1f V-type proton ATPase subunit F yes yes 0 0 0 0 9.29 1.67 3 2 1 1 110.05 110.05 3;4 7.915E-19 37575 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.05 87.245 20.289 66.806 45.9 45.727 56.068 17.602 19 65 45 44 55 17 2 7 5 5 6 2 16856 12402 3042 11950 28953;28954;28955;28956;28957;28958;28959 33614;33615;33616;33617;33618;33619;33620;33621;33622;33623;33624;33625;33626 33623 13 LICCDILDVLDK Unmodified 1475.7364 0.73638702 1715 P62259;D6REF3;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 8.67 2.21 1 1 1 2 1 92.577 92.577 2;3 2.3694E-12 33556 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.08 82.058 553.06 348.49 255.66 280.34 455.09 560.31 518 358 251 272 455 536 7 8 5 7 6 8 209570 12403 1715 11951 28960;28961;28962;28963;28964;28965 33627;33628;33629;33630;33631;33632;33633;33634;33635;33636;33637;33638 33630 12 LICCDILDVLDKHLIPAANTGESK Unmodified 2694.3721 0.37207244 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 1 10 2.16 1 1 1 86.972 86.972 4 1.0337E-10 31485 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.704 59.721 89.439 83.962 74.347 106.37 36.548 29.848 84 84 74 102 37 28 4 3 2 4 1 1 20915 12404 1715 11952 28966;28967;28968 33639;33640;33641;33642;33643;33644 33639 6 LICEATNFTPKPITVSWLK Unmodified 2217.1868 0.1867615 3 A0A075B6A0;A0A075B5P6;P01872 Ighm Ig mu chain C region yes no 0 0 0 1 11 0 1 83.723 83.723 4 2.6829E-06 26139 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.935 61.832 30.044 0 0 9.837 0 0 28 0 0 9 0 0 1 0 0 1 0 0 3720.6 12405 3 11953 28969 33645 33645 1 LIDALIENFLEPSK Unmodified 1600.8712 0.87122424 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 9 0.816 1 1 1 109.95 109.95 3 4.1622E-05 37571 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.566 56.269 7.511 4 55.896 8.25 47.07 27.716 7 4 52 8 45 26 1 1 3 1 2 2 9829.8 12406 2513 11954 28970;28971;28972 33646;33647;33648;33649;33650 33648 5 LIDDMVAQAMK Unmodified 1233.6097 0.60972994 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 8 0 1 82.043 82.043 3 0.0056212 28991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.237 28.856 20.195 38.006 0 29.743 45.769 28.542 19 37 0 28 46 28 1 1 0 1 1 1 1553.8 12407 1278 11955 28973 33651 33651 1 LIDDMVAQVLK Unmodified 1243.6846 0.68460945 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 8 1 1 1 92.104 92.104 3 0.0048354 32636 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.784 27.48 20.387 0 0 9.3067 28.193 38.45 19 0 0 9 28 38 1 0 0 1 1 2 1905.8 12408 1618 11956 28974;28975 33652;33653 33653 2 LIDDYGVEEEPAELPEGTSLTVDNK Unmodified 2732.2916 0.29161632 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 3.4 0.49 3 2 79.14 79.14 3;4;5 1.2619E-11 29500 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.853 54.42 28.602 63.726 46.388 18.121 55.493 92.493 28 60 46 18 56 88 2 2 3 2 4 4 28837 12409 1542 11957 28976;28977;28978;28979;28980 33654;33655;33656;33657;33658;33659;33660 33659 7 LIDDYGVEEEPAELPEGTSLTVDNKR Unmodified 2888.3927 0.39272735 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 1 5 3.34 3 2 1 1 71.799 71.799 3;4;5 2.8797E-20 26658 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.916 70.238 59.922 86.389 64.931 86.897 64.642 127.7 56 84 65 84 65 121 2 3 2 3 3 4 86600 12410 1542 11958 28981;28982;28983;28984;28985;28986;28987 33661;33662;33663;33664;33665;33666;33667;33668;33669 33661 9 LIDFLECGK Unmodified 1093.5478 0.54778161 2135 Q8BTS0;Q61656;S4R1I6 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 8.5 0.5 1 1 82.235 82.235 3 0.0011825 29052 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.594 55.476 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 4048.2 12411 2135 11959 28988;28989 33670;33671 33670 2 LIDFLESGK Unmodified 1020.5492 0.54916182 1963 Q501J6;Q3U741;Q3TU25 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 8 0 1 82.281 82.281 2 0.0047651 29070 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.731 41.092 0 0 68.318 45.174 54.871 47.47 0 0 65 46 56 46 0 0 1 1 1 1 3156.8 12412 1963 11960 28990 33672 33672 1 LIDLHSPSEIVK Unmodified 1349.7555 0.7554662 1680 P60867 Rps20 40S ribosomal protein S20 yes yes 0 0 0 0 6.5 0.5 1 1 64.918 64.918 3 1.1659E-05 21535 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.103 72.498 88.133 160.27 113.37 143.8 72.796 175.94 83 158 120 139 74 167 1 2 2 2 1 2 18809 12413 1680 11961 28991;28992 33673;33674 33674 2 LIDLHTNVATAVLEHIK Unmodified 1886.0625 0.062547262 2448 Q8BRF7 Scfd1 Sec1 family domain-containing protein 1 yes yes 0 0 0 0 10 0.816 1 1 1 78.633 78.633 4 0.00015614 24350 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.671 33.351 0 59.584 86.005 125.78 71.843 47.771 0 56 83 121 74 46 0 1 2 3 2 1 9506.6 12414 2448 11962 28993;28994;28995 33675;33676;33677 33676 3 LIDMLSEAGLPVIEATSFVSPK Unmodified 2316.2287 0.22868589 1532 P38060 Hmgcl Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 0 0 0 0 9 0 2 109.26 109.26 3;4 1.5701E-09 37467 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.522 54.734 0 4.256 0 0 0 9.594 0 4 0 0 0 9 0 1 0 0 0 1 2437.1 12415 1532 11963 28996;28997 33678;33679 33679 2 LIDPQTQVTR Unmodified 1169.6404 0.64043645 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 0 7 0 1 51.851 51.851 2 0.0071597 15392 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.808 15.132 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 5258.2 12416 2612 11964 28998 33680 33680 1 LIDVNHYAK Unmodified 1071.5713 0.57129425 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 53.13 53.13 3 1.3324E-06 15358 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 154.81 90.328 1301.7 1370.8 1572.3 1330.4 1180.8 1533.3 1226 1394 1590 1317 1227 1467 4 5 6 5 4 4 281010 12417 551 11965 28999;29000;29001;29002 33681;33682;33683;33684;33685;33686 33682 6 LIDVNHYAK Deamidation (N) 1072.5553 0.55530983 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 7 0 1 56.037 56.037 3 0.025977 17350 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.567 20.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12418 551 11965 29003 33687 33687 151 1 LIDWGLAEFYHPGQEYNVR Unmodified 2306.112 0.11201665 2083 Q60737 Csnk2a1 Casein kinase II subunit alpha yes yes 0 0 0 0 8 0.816 1 1 1 84.845 84.845 3 9.0132E-06 30988 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.12 49.997 20.387 0 28 29.234 28.359 0 19 0 28 28 28 0 1 0 1 2 1 0 13890 12419 2083 11966 29004;29005;29006 33688;33689;33690 33688 3 LIEAFSQR Unmodified 962.51853 0.5185304 281;553;1918 A0A1D5RM83;E9PUA3;Q8R0S2;D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7;Q3TES0 Iqsec1;Iqsec2;Iqsec3 IQ motif and SEC7 domain-containing protein 1;IQ motif and SEC7 domain-containing protein 2;IQ motif and SEC7 domain-containing protein 3 no no 0 0 0 0 9 0 1 61.538 61.538 2 0.012023 18586 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.064 44.229 69.238 0 85.237 94.725 98.007 126.19 65 0 83 93 102 121 1 0 1 1 1 1 12413 12420 281;553;1918 11967 29007 33691 33691 1 LIEDFLAR Unmodified 975.53893 0.53893149 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 0 6 0 1 78.952 78.952 2 0.049916 28973 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.673 29.716 39.585 0 19.516 18.911 36.844 28.797 37 0 19 19 37 28 1 0 1 1 1 1 2511 12421 1227 11968 29008 33692 33692 1 LIEDNEYTAR Unmodified 1222.583 0.58298115 1048;1535 F8WI90;P05480;E9Q696;P06240;P39688;D3YZ57 Src;Lck;Fyn Neuronal proto-oncogene tyrosine-protein kinase Src;Non-specific protein-tyrosine kinase;Proto-oncogene tyrosine-protein kinase LCK;Tyrosine-protein kinase Fyn no no 0 0 0 0 8.5 4.5 1 1 50.579 50.579 2 0.0024272 16677 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.958 0 39.468 134.59 0 131.07 62.915 67.495 37 129 0 121 65 65 1 2 0 2 1 1 17271 12422 1048;1535 11969 29009;29010 33693;33694 33693 2 LIEESPIDEVVVTNTVPHELQK Unmodified 2488.3061 0.30608459 584 B1AT82;Q9D0M1 Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 0 4 0 1 77.027 77.027 4 0.00027023 28613 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.415 22.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1765.3 12423 584 11970 29011 33695 33695 1 LIEEVHAVVTVR Unmodified 1363.7823 0.78234966 1732 P62743;A0A0U1RPS0 Ap2s1 AP-2 complex subunit sigma yes no 0 0 0 0 8.5 2.69 1 1 1 1 64.236 64.236 3 0.00020154 21438 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.088 56.109 227.24 183.64 164.98 138.28 313.07 405.74 213 186 158 130 315 389 5 5 3 3 5 6 24651 12424 1732 11971 29012;29013;29014;29015 33696;33697;33698;33699;33700;33701 33699 6 LIEEVMIGEDK Unmodified 1274.6428 0.64280421 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 5 0.816 1 1 1 77.744 77.744 3 0.0054736 29049 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.528 22.7 39.468 46.283 20.173 8.6347 57.702 29.848 37 46 19 9 56 28 1 1 1 1 2 1 7236.7 12425 1823 11972 29016;29017;29018 33702;33703;33704 33703 3 LIEFLSK Unmodified 848.50076 0.50075507 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 10 0 1 78.785 78.785 2 0.026797 24381 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.997 17.213 88.26 61.841 81.827 85.842 0 118.33 83 65 83 83 0 111 1 1 1 1 0 1 21092 12426 1888 11973 29019 33705 33705 1 LIEFLSSFQK Unmodified 1210.6598 0.6597749 3109 Q9DB16 Cab39l Calcium-binding protein 39-like yes yes 0 0 0 0 1 0 1 93.045 93.045 3 0.0021206 32848 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.347 34.777 14.868 13.655 14.254 0 0 0 14 14 14 0 0 0 1 1 1 0 0 0 675.36 12427 3109 11974 29020 33706 33706 1 LIEHPHVLK Unmodified 1084.6393 0.63931423 1061;778 G3UXM5;G3UWV4;Q69Z98;G3UZ00;D3Z5P0;Q5RJI5 Brsk2;Brsk1 Serine/threonine-protein kinase BRSK2;Serine/threonine-protein kinase BRSK1 no no 0 0 0 0 8 0 1 46.42 46.42 4 0.0023368 12279 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.223 43.481 48.625 55.026 76.521 0 38.702 0 46 56 74 0 37 0 1 1 1 0 1 0 3040.3 12428 1061;778 11975 29021 33707 33707 1 LIENVDPEK Unmodified 1055.5499 0.5498901 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7.33 4.03 1 1 1 58.311 58.311 2;3 9.5894E-06 20037 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.28 70.318 0 96.879 229.31 114.13 227.45 260.01 0 93 222 112 231 250 0 1 3 2 3 3 45880 12429 775 11976 29022;29023;29024 33708;33709;33710 33710 3 LIETYFSK Unmodified 999.5277 0.5276981 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 9.22 3.26 1 1 2 2 1 1 1 72.132 72.132 2;3 0.00045659 23759 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.63 76.596 2639.5 1572.3 2645.5 1757.8 4801.2 2283.7 2480 1590 2609 1800 4738 2206 10 8 11 8 12 9 1977900 12430 1666 11977 29025;29026;29027;29028;29029;29030;29031;29032;29033 33711;33712;33713;33714;33715;33716;33717;33718;33719;33720;33721;33722;33723 33716 13 LIEVGPSGAQFLGK Unmodified 1414.782 0.78201531 3449;3452 S4R2F3;S4R1J9;S4R2T7 Ank2 no no 0 0 0 0 9.33 0.471 2 1 76.499 76.499 2;3 6.2963E-14 23347 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.551 63.361 48.953 25.717 96.076 87.959 45.122 156.48 46 28 92 83 46 148 1 1 2 2 1 2 35701 12431 3449;3452 11978 29034;29035;29036 33724;33725;33726;33727 33727 4 LIEYCHSK Unmodified 1048.5012 0.50116577 1548 P45376 Akr1b1 Aldose reductase yes yes 0 0 0 0 7 0 1 45.086 45.086 3 0.01326 12264 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.828 39.796 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12432 1548 11979 29037 33728 33728 1 LIEYYQQLAQK Unmodified 1395.7398 0.73981614 2520 Q8CBY8 Dctn4 Dynactin subunit 4 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 76.214 76.214 2;3 5.3226E-06 25528 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.2 66.35 50.375 0 55.484 0 28.291 29.041 47 0 55 0 28 28 1 0 2 0 1 1 9555.7 12433 2520 11980 29038;29039;29040;29041 33729;33730;33731;33732 33729 4 LIFADGSR Unmodified 877.46577 0.46576654 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 9 0 1 58.274 58.274 2 0.0064218 17051 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.92 32.091 107.76 177.78 132.54 149.31 242.14 150.86 102 176 139 148 243 148 1 1 1 1 1 1 21819 12434 3022 11981 29042 33733 33733 1 LIFAGKQLEDGR Unmodified 1345.7354 0.73539946 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 1 9.5 0.5 1 1 61.871 61.871 3 0.00056203 16789 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.283 56.563 1088.4 613.62 1038.6 730.09 952.97 1231.8 1023 662 1029 741 967 1181 2 2 2 2 1 2 93551 12435 58 11982 29043;29044 33734;33735 33735 2 LIFDNLK Unmodified 861.496 0.49600404 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp4a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 10 0.816 1 1 1 72.457 72.457 2;3 0.0054013 21723 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.62 24.592 536.18 467.17 315.15 405.99 582.02 510 503 478 322 395 591 494 2 3 2 2 2 2 284140 12436 106;2253;2699 11983 29045;29046;29047 33736;33737;33738 33737 3 LIFDNLKK Unmodified 989.59097 0.59096706 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp4a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 1 10.1 3.55 1 1 3 2 1 64.708 64.708 3;4 0.0022932 15794 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.298 43.14 8223.2 6027.1 6656.7 7695.9 6699.9 9515.6 7729 6275 6644 7493 6883 9100 9 8 7 6 8 8 1253300 12437 106;2253;2699 11984 29048;29049;29050;29051;29052;29053;29054;29055 33739;33740;33741;33742;33743;33744;33745;33746;33747;33748;33749 33748 11 LIFGDALLMEPLEK Unmodified 1587.8582 0.85821672 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8.5 0.5 1 1 96.313 96.313 2;3 5.7539E-05 34707 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.591 55.051 0 18.899 15.127 22.051 0 0 0 18 15 21 0 0 0 2 1 2 0 0 3281 12438 3373 11985 29056;29057 33750;33751 33750 2 LIFQMPQNK Unmodified 1117.5954 0.59540051 2003 Q3UQ44;Q3UQP1;F8VQ29;Q9JKF1 Iqgap2;Iqgap3;Iqgap1 Ras GTPase-activating-like protein IQGAP2;Ras GTPase-activating-like protein IQGAP1 yes no 0 0 0 0 11.5 0.5 1 1 70.103 70.103 2;3 0.00099013 17854 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.9 41.774 49.176 36.052 0 50.278 0 69.29 46 37 0 46 0 65 1 1 0 1 0 1 2817.2 12439 2003 11986 29058;29059 33752;33753 33753 2 LIFQSCDYK Unmodified 1172.5536 0.55359527 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R2E3;A0A140T8U6 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 10 0.816 1 1 1 66.117 66.117 2 0.00085373 20772 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.62 77.227 20.387 0 106.61 84.365 37.054 47.979 19 0 102 83 37 46 1 0 1 1 1 1 21662 12440 3447 11987 29060;29061;29062 33754;33755;33756 33754 3 LIFQVLDAVK Unmodified 1144.6856 0.68559572 2779 Q91YS8;D3Z368 Camk1 Calcium/calmodulin-dependent protein kinase type 1 yes no 0 0 0 0 11.5 0.5 1 1 94.527 94.527 2;3 0.0016215 27080 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.679 53.122 20.182 0 34.522 0 29.288 0 19 0 32 0 28 0 1 0 1 0 1 0 8149 12441 2779 11988 29063;29064 33757;33758 33758 2 LIFSTITSK Unmodified 1008.5855 0.58554733 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 6.5 5.5 1 1 73.577 73.577 2 3.1277E-05 25301 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.2 78.354 176.6 154.11 202.2 64.912 193.65 183.16 166 158 195 65 194 177 3 3 3 1 3 3 63994 12442 237 11989 29065;29066 33759;33760;33761;33762 33760 4 LIGDAAK Unmodified 686.39629 0.39629 1762;1419;1397;1407;1394 P17156;P63017;Q504P4;D3Z5E2;Q61696;P17879;P16627;P20029 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l;Hspa5 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein no no 0 0 0 0 8.6 2.42 1 1 1 1 1 49.981 49.981 2 0.019793 16088 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.43 48.224 6213.4 4603.6 6247.9 6252.2 7326.1 7232.7 5847 4772 6316 6187 7516 6981 5 4 5 5 5 5 867930 12443 1397;1762;1407;1394;1419 11990 29067;29068;29069;29070;29071 33763;33764;33765;33766;33767 33767 5 LIGEVFNIVSQQSTAR Unmodified 1760.9421 0.94209778 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11 0.816 1 1 1 88.665 88.665 2;3 5.4704E-06 28278 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.055 73.073 9 9 56.814 33.259 0 14.924 9 9 56 32 0 14 1 1 2 1 0 1 23674 12444 570 11991 29072;29073;29074 33768;33769;33770;33771 33769 4 LIGEYGLR Unmodified 919.51272 0.51271674 2268 Q6ZWN5;F7CJS8;D3YWH9;Q9CXW7;D3YUV6;D3Z673 Rps9 40S ribosomal protein S9 yes no 0 0 0 0 7 0 1 60.702 60.702 2 0.044988 19649 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.676 28.701 49.128 45.631 0 50.278 0 0 46 46 0 46 0 0 1 1 0 1 0 0 5021.1 12445 2268 11992 29075 33772 33772 1 LIGFAQLSIS Unmodified 1047.5964 0.59644637 2228 Q6P9R2 Oxsr1 Serine/threonine-protein kinase OSR1 yes yes 0 0 0 0 11 0 1 93.332 93.332 2 0.044634 30132 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.17 28.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3134.6 12446 2228 11993 29076 33773 33773 1 LIGFAQLSVS Unmodified 1033.5808 0.5807963 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 0 0 0 10 0 1 89.483 89.483 2 0.014286 28958 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.682 33.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12447 3386 11994 29077 33774 33774 1 LIGLYNQK Unmodified 947.54402 0.54401687 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 11.5 0.5 1 1 62.614 62.614 2 0.00088607 15238 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.19 31.435 0 0 60.592 0 86.818 0 0 0 56 0 83 0 0 0 1 0 1 0 52555 12448 2300 11995 29078;29079 33775;33776 33776 2 LIGNLCYK Unmodified 979.51609 0.51608756 1476 P28658 Atxn10 Ataxin-10 yes yes 0 0 0 0 10 0 1 64.662 64.662 2 0.00725 18021 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.95 49.937 69.291 0 151.3 190.45 145.65 222.9 65 0 148 185 148 213 1 0 2 2 1 2 8744.5 12449 1476 11996 29080 33777;33778 33778 2 LIGNMALLPLR Unmodified 1209.7267 0.72674903 1126 H7BWZ3;Q9JM76 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 7.6 5.43 2 1 1 1 83.722 83.722 2 1.0882E-25 23092 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 180.34 94.207 686.77 568.47 910.94 482.75 652.5 885.27 646 585 894 485 666 847 11 9 12 7 8 9 238270 12450 1126 11997 29081;29082;29083;29084;29085 33779;33780;33781;33782;33783;33784;33785;33786;33787;33788;33789;33790;33791;33792 33790 14 LIGPNCPGVINPGECK Unmodified 1723.8386 0.83856068 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 64.37 64.37 3 1.1379E-05 20593 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.141 56.512 206.69 116.29 149.08 68.209 161.09 29.848 194 121 148 65 157 28 3 2 3 1 2 1 30531 12451 3337 11998 29086;29087;29088 33793;33794;33795 33794 3 LIGQIKPELYQGTGPGGR Unmodified 1883.0265 0.026496107 1090 G3X9Y1;O35681 Syt3 Synaptotagmin-3 yes no 0 0 0 1 10 0 1 64.368 64.368 3 8.773E-15 17889 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.636 69.627 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12452 1090 11999 29089 33796 33796 1 LIGQIVSSITASLR Unmodified 1456.8613 0.86132826 1794 P68369;P05214 Tuba1a;Tuba3a Tubulin alpha-1A chain;Tubulin alpha-3 chain yes no 0 0 0 0 13 0 2 101.34 101.34 2;3 7.0643E-25 41092 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.94 124.1 119.34 82.685 69.596 0 134.02 77.23 112 84 66 0 130 75 4 2 2 0 2 2 159690 12453 1794 12000 29090;29091 33797;33798;33799;33800;33801 33798 5 LIGSVDDLLPSLPASSR Unmodified 1738.9465 0.94651445 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 8 0 1 86.527 86.527 3 0.00013694 31165 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.127 32.83 0 48.486 27.387 0 0 29.848 0 46 28 0 0 28 0 1 1 0 0 1 4140.1 12454 3261 12001 29092 33802 33802 1 LIGTAVPQR Unmodified 953.56581 0.56581494 2243 Q6PER3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes yes 0 0 0 0 10 0 1 50.508 50.508 2 0.0017021 11838 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.997 43.466 69.42 64.479 0 0 0 69.29 65 65 0 0 0 65 1 1 0 0 0 1 8367 12455 2243 12002 29093 33803 33803 1 LIGTNCIIYPVNSK Unmodified 1590.844 0.84396364 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 10.5 0.5 1 1 71.975 71.975 2;3 2.6919E-16 21628 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.35 72.696 0 78.736 0 61.208 0 78.884 0 74 0 56 0 74 0 1 0 1 0 1 6045.5 12456 2262 12003 29094;29095 33804;33805 33804 2 LIGWGQIR Unmodified 941.54469 0.54468557 3359 Q9Z0N1;Q9Z0N2 Eif2s3x;Eif2s3y Eukaryotic translation initiation factor 2 subunit 3, X-linked;Eukaryotic translation initiation factor 2 subunit 3, Y-linked yes no 0 0 0 0 11 0 1 67.374 67.374 2 0.011714 18827 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.319 51.747 0 0 0 0 0 167 0 0 0 0 0 167 0 0 0 0 0 1 29721 12457 3359 12004 29096 33806 33806 1 LIHLEIKPAIR Unmodified 1301.8183 0.81834123 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 1 10.5 0.5 1 1 59.481 59.481 4 0.00014077 16090 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.363 54.318 59.363 43.521 223.94 43.847 72.752 76.808 56 46 222 46 74 74 1 1 2 1 1 1 51574 12458 1500 12005 29097;29098 33807;33808 33807 2 LIHNLNVILAR Unmodified 1274.7823 0.78229008 1628 P55302 Lrpap1 Alpha-2-macroglobulin receptor-associated protein yes yes 0 0 0 0 12 0 1 65.683 65.683 2 0.021807 16204 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.436 7.7495 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12459 1628 12006 29099 33809 33809 1 LIHQTNLILQTFK Unmodified 1567.9086 0.9086128 1046 F8WI55;Q8VE70 Pdcd10 Programmed cell death protein 10 yes no 0 0 0 0 12 0 1 73.331 73.331 3 0.04557 19000 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.657 17.032 0 19.566 38.86 0 38.702 0 0 19 37 0 37 0 0 1 1 0 1 0 2529.4 12460 1046 12007 29100 33810 33810 1 LIHSNHR Unmodified 875.47258 0.47258326 3346 Q9WV96;A0A1B0GRJ5;D6RG99;D3YVK5;A0A1B0GSU2;D3YVK4 Timm10b Mitochondrial import inner membrane translocase subunit Tim10 B yes no 0 0 0 0 8.5 0.5 1 1 21.674 21.674 3 0.0045541 3282 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.29 56.915 14.964 4.6466 5.8937 14.722 12.161 0 14 5 6 14 12 0 2 1 1 2 1 0 1104.8 12461 3346 12008 29101;29102 33811;33812 33812 2 LIIAGTSAYAR Unmodified 1134.6397 0.63970816 3005 Q9CZN7 Shmt2 Serine hydroxymethyltransferase yes yes 0 0 0 0 12 0 1 59.565 59.565 2 0.012675 14009 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.23 22.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12462 3005 12009 29103 33813 33813 1 LIINSLYK Unmodified 962.58007 0.58006802 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 9.25 4.82 1 1 1 1 71.233 71.233 2 0.0012235 18173 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 144.38 85.394 541.5 499.96 538.67 483.11 733.51 564.3 510 506 535 484 741 549 6 5 4 5 5 5 152370 12463 1324 12010 29104;29105;29106;29107 33814;33815;33816;33817;33818;33819 33818 6 LIIVEGCQR Unmodified 1086.5856 0.5855641 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 57.03 57.03 2 8.5511E-35 17358 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 204.03 111.56 3057.1 1888.1 2781.1 2595.8 2805.5 3323.7 2871 1967 2803 2562 2891 3193 5 4 6 5 5 7 876160 12464 106;2253;2699 12011 29108;29109;29110;29111;29112;29113 33820;33821;33822;33823;33824;33825;33826;33827 33822 8 LIIWDSYTTNK Unmodified 1352.6976 0.69761697 1751;1750;1485 P29387;P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7 Gnb4;Gnb2;Gnb1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 0 9.91 3.12 1 2 3 2 1 2 76.682 76.682 2;3 3.7788E-43 29086 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 205.83 79.514 1230.5 1028.6 1744.2 1629.2 1773.1 1523.9 1155 1016 1728 1595 1790 1477 8 8 7 7 8 9 1613700 12465 1485;1751;1750 12012 29114;29115;29116;29117;29118;29119;29120;29121;29122;29123;29124 33828;33829;33830;33831;33832;33833;33834;33835;33836;33837;33838;33839;33840 33839 13 LIIWDSYTTNK Deamidation (N) 1353.6816 0.68163256 1751;1750;1485 P29387;P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7 Gnb4;Gnb2;Gnb1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 1 0 0 9 0 1 79.736 79.736 3 0.038321 27232 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.741 9.4753 0 0 60.592 0 85.217 46.604 0 0 56 0 83 46 0 0 1 0 1 1 3061 12466 1485;1751;1750 12012 29125 33841 33841 553 1 LIIWDSYTTNKVHAIPLR Unmodified 2139.1841 0.18405938 1751;1750 P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7 Gnb2;Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 1 12 0 1 71.84 71.84 4 3.1482E-07 18518 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.507 32.564 87.818 90.83 232.26 70.253 279.85 224.4 83 93 223 74 278 218 1 1 2 1 2 2 15014 12467 1751;1750 12013 29126 33842;33843 33842 2 LIKDDFLQQNGYTPYDR Deamidation (N) 2086.0007 0.0007348666 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 1 0 1 9.11 2.88 2 2 1 1 3 70.301 70.301 3;4 9.3171E-12 24395 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.27 107.84 537.57 678.76 439.08 443.46 711.12 678.13 504 670 437 433 719 652 6 7 6 6 8 6 189860 12468 1596 12014 29127;29128;29129;29130;29131;29132;29133;29134;29135 33844;33845;33846;33847;33848;33849;33850;33851;33852;33853 33848 614 10 LIKDDFLQQNGYTPYDR Unmodified 2085.0167 0.016719282 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 8 0.816 1 1 1 69.187 69.187 3 9.1954E-06 23686 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.726 60.564 127.5 44.902 174.15 47.613 97.278 0 120 46 166 46 93 0 2 1 2 1 1 0 23052 12469 1596 12014 29136;29137;29138 33854;33855;33856 33854 3 LIKDHLFEESTFAPYIDELSDEQHR Unmodified 3031.4563 0.45633066 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 1 6.5 0.5 1 1 81.558 81.558 5 1.3896E-07 29275 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.922 46.181 0 29.792 0 59.284 102.27 18.939 0 28 0 56 101 19 0 1 0 2 2 1 5094.7 12470 2583 12015 29139;29140 33857;33858 33858 2 LILADALCYAHTFNPK Unmodified 1845.9447 0.94474031 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 11 0.816 1 1 1 82.825 82.825 3;4 3.134E-17 25923 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.15 108.6 109.11 67.157 0 30.604 94.662 135.88 102 65 0 28 93 130 2 1 0 1 1 2 28644 12471 2904 12016 29141;29142;29143 33859;33860;33861 33860 3 LILAGALR Unmodified 825.54362 0.54362294 2217 Q6P572;Q9Z2D1 Mtmr2 Myotubularin-related protein 2 yes no 0 0 0 0 1 0 1 66.833 66.833 2 0.010401 22572 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.64 23.043 39.701 0 39.264 17.286 148.53 37.711 37 0 37 19 144 37 1 0 1 1 2 1 12375 12472 2217 12017 29144 33862;33863 33863 2 LILDFLNSK Unmodified 1061.6121 0.61209643 2537 Q8CGF6;A0A0G2JFW8 Wdr47 WD repeat-containing protein 47 yes no 0 0 0 0 9 4.64 1 1 2 91.67 91.67 2;3 0.0010171 26152 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.15 52.605 89.759 74.058 59.093 54.407 73.742 106.63 84 74 56 53 74 102 2 1 1 2 1 1 24690 12473 2537 12018 29145;29146;29147;29148 33864;33865;33866;33867 33866 4 LILDSAR Unmodified 786.45995 0.45995289 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 7 0 1 53.461 53.461 2 0.027422 16079 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.401 17.555 157.92 66.555 91.649 93.994 116.56 135.25 148 74 93 93 120 130 1 1 1 1 1 1 16775 12474 1537 12019 29149 33868 33868 1 LILDVEK Unmodified 828.49567 0.49566969 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 10 3 1 1 68.263 68.263 2 0.025802 23302 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.19 8.6038 138.86 77.745 164.41 245.17 448.94 214.25 130 74 167 241 447 213 1 1 2 2 2 2 19008 12475 2300 12020 29150;29151 33869;33870 33869 2 LILDVFCGSQMHFVR Unmodified 1820.9066 0.90658067 1869 Q00612 G6pdx Glucose-6-phosphate 1-dehydrogenase X yes yes 0 0 0 0 12 0 1 83.455 83.455 3 0.00035043 23143 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.374 51.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12476 1869 12021 29152 33871 33871 1 LILDWVPYINGK Deamidation (N) 1430.781 0.78095267 2903 Q9CPX8 Uqcr11 Cytochrome b-c1 complex subunit 10 yes yes 0 1 0 0 10.5 1.32 2 3 1 1 1 96.758 96.758 2;3 7.5316E-07 34885 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.62 68.254 74.714 161.21 81.184 282.02 97.174 101.34 70 157 78 265 99 98 2 4 3 5 3 4 54525 12477 2903 12022 29153;29154;29155;29156;29157;29158;29159;29160 33872;33873;33874;33875;33876;33877;33878;33879;33880 33873 1019 9 LILDWVPYINGK Unmodified 1429.7969 0.79693709 2903 Q9CPX8 Uqcr11 Cytochrome b-c1 complex subunit 10 yes yes 0 0 0 0 12 0 1 95.104 95.104 2 3.6273E-05 27308 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.431 67.957 0 9.576 0 0 9.414 0 0 9 0 0 9 0 0 1 0 0 1 0 589.07 12478 2903 12022 29161 33881 33881 1 LILEKYHDGTK Unmodified 1315.7136 0.71360139 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 9 0 1 53.99 53.99 4 0.013617 15037 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.791 34.538 0 67.938 73.083 65.29 74.405 0 0 65 74 65 74 0 0 1 1 1 1 0 4528.5 12479 1390 12023 29162 33882 33882 1 LILEQMQK Unmodified 1001.558 0.55795237 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 9.5 0.5 1 1 66.197 66.197 2 0.00814 20857 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.302 45.515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12480 2092 12024 29163;29164 33883;33884 33883 2 LILEVHQFSR Unmodified 1240.6928 0.69280637 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 10 2.16 1 1 1 59.825 59.825 3 1.164E-07 18674 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.57 91.258 238.95 65.13 0 109.72 204.2 263.36 223 65 0 102 204 250 3 1 0 2 2 2 69479 12481 2148 12025 29165;29166;29167 33885;33886;33887 33885 3 LILEYVK Unmodified 876.53206 0.5320552 739 O88545;D3Z0F5;F6QK86 Cops6 COP9 signalosome complex subunit 6 yes no 0 0 0 0 9.5 0.5 1 1 73.985 73.985 2 0.027669 22313 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.071 34.357 108.16 204.74 300.75 174.44 0 256.91 102 204 297 176 0 241 1 2 2 2 0 2 33188 12482 739 12026 29168;29169 33888;33889 33889 2 LILGLMMPPAHYDAK Unmodified 1668.8732 0.87315527 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 3.75 4.76 3 1 82.749 82.749 3;4 1.3084E-05 21697 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.3 58.427 119.53 0 108.19 87.188 36.424 29.848 112 0 102 83 37 28 3 0 2 2 1 1 8395.9 12483 1050;1380 12027 29170;29171;29172;29173 33890;33891;33892;33893 33893 4 LILKPAIK Unmodified 894.62662 0.62662428 1424 P20357;G3UZV6;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 6.5 5.5 1 1 61.619 61.619 3 0.0066006 20811 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.492 84.644 1254.1 1215 2089.5 1740.9 2571.9 2034.3 1182 1249 2076 1751 2602 1955 2 3 4 4 4 3 112090 12484 1424 12028 29174;29175 33894;33895;33896;33897 33895 4 LILLWNVYGDCDNYATLK Unmodified 2170.0769 0.076876698 2241 Q6PE01 Snrnp40 U5 small nuclear ribonucleoprotein 40 kDa protein yes yes 0 0 0 0 12 0 1 97.309 97.309 3 0.0010438 27845 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.204 30.325 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 827.08 12485 2241 12029 29176 33898 33898 1 LILNYSPR Unmodified 974.55492 0.5549159 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 11.5 1.12 1 1 1 1 60.986 60.986 2;3 4.6451E-16 14658 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 180.93 101.47 914.88 738.69 927.41 380.21 1044 1011.2 861 747 918 374 1048 976 4 4 5 2 5 4 162520 12486 2479 12030 29177;29178;29179;29180 33899;33900;33901;33902;33903 33902 5 LILPELGPVFK Unmodified 1224.7482 0.74819598 1105 Q80UY7;G5E8J9;Q8CFE4 Scyl2 SCY1-like protein 2 yes no 0 0 0 0 10.5 0.5 1 1 90.366 90.366 3 0.0008222 29349 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.893 48.023 19 19 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 4376.8 12487 1105 12031 29181;29182 33904;33905 33904 2 LILPGLISSR Unmodified 1067.6703 0.67028001 1402 P17563;Q63836;D6RHN2 Selenbp1;Selenbp2 Selenium-binding protein 1;Selenium-binding protein 2 yes no 0 0 0 0 6.5 5.5 1 1 77.9 77.9 2 1.1327E-07 27169 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.04 71.518 296.48 256.43 267.39 298.06 213.61 301.98 279 264 275 287 223 289 5 5 5 4 3 4 73446 12488 1402 12032 29183;29184 33906;33907;33908;33909;33910 33906 5 LILPHVDVQLK Unmodified 1273.7758 0.77580772 1618 P54071;D6RIL6;A0A0U1RPR1 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 11.3 1.25 1 1 1 71.365 71.365 3 3.6249E-06 26588 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.22 78.748 138.34 181.95 89.506 189.9 131.42 148.17 130 176 83 176 130 139 2 2 1 2 1 2 39824 12489 1618 12033 29185;29186;29187 33911;33912;33913 33913 3 LILPVGPAGGNQMLEQYDK Unmodified 2042.0507 0.050661947 808 F7D432;E9PWE0;E0CYV0;P23506 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 9 0 1 81.753 81.753 3 9.5966E-08 28184 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.176 71.549 0 48.944 0 0 116.11 0 0 46 0 0 111 0 0 1 0 0 1 0 17070 12490 808 12034 29188 33914 33914 1 LILPYVELDLHSYDLGIENR Unmodified 2371.2424 0.24236212 1278 O88844;A0A087WPT4;A0A087WRS9;D3YVY3;A0A087WRM4 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes no 0 0 0 0 7.5 0.5 1 1 91.672 91.672 3 0.00086401 33308 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.955 37.193 0 0 8.8364 20.24 0 20.254 0 0 9 19 0 19 0 0 1 1 0 1 2449.9 12491 1278 12035 29189;29190 33915;33916 33916 2 LIMGIGHR Unmodified 895.50619 0.50619157 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 11 0 1 48.918 48.918 3 0.0018132 11112 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.74 71.169 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 16084 12492 2020 12036 29191 33917 33917 1 LIMNYLVTEGFK Unmodified 1426.753 0.75302336 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 11.5 0.5 1 1 89.626 89.626 2;3 0.0004065 28755 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.958 59.444 69.212 73.188 43.61 57.516 0 59.696 65 75 46 55 0 56 1 2 1 1 0 1 7388.6 12493 3079 12037 29192;29193 33918;33919 33918 2 LIMQYLK Unmodified 907.52011 0.5201103 1992 Q3UKJ7 Smu1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 0 6.5 5.5 1 1 74.621 74.621 2;3 0.0059265 19458 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.113 39.046 118.57 71.319 29.054 49.618 63.063 77.084 111 75 28 46 65 74 2 2 1 1 2 2 4836.1 12494 1992 12038 29194;29195 33920;33921 33921 2 LINAEYACYK Unmodified 1243.5907 0.59070906 488;489 A2ALS5;A2ALS4;A2ALS7 Rap1gap Rap1 GTPase-activating protein 1 no no 0 0 0 0 8 0 1 62.569 62.569 2 0.0047644 19777 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.977 44.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12495 488;489 12039 29196 33922 33922 1 LINGGIAGLIGVTCVFPIDLAK Deamidation (N) 2241.2443 0.24427638 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q80X52;E9Q579;A0A0J9YUX4;A0A0J9YUJ4;G3UX09 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 1 0 0 10.9 1.14 1 3 3 2 1 110.64 110.64 3;4 2.6065E-18 35983 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.02 93.866 45.914 42.755 42.38 29.353 20.388 54.61 43 42 41 29 20 52 4 5 5 4 2 6 41757 12496 3075 12040 29197;29198;29199;29200;29201;29202;29203;29204;29205;29206 33923;33924;33925;33926;33927;33928;33929;33930;33931;33932;33933;33934 33931 1068 12 LINGGIAGLIGVTCVFPIDLAK Unmodified 2240.2603 0.26026079 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q80X52;E9Q579;A0A0J9YUX4;A0A0J9YUJ4;G3UX09 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 11.5 0.5 1 1 106.21 106.21 3 2.8779E-17 29380 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.39 92.759 0 25.231 18.226 6.9858 12.521 42.283 0 24 18 7 13 40 0 3 2 1 2 3 6389.9 12497 3075 12040 29207;29208 33935;33936;33937 33937 3 LINGGIAGLVGVTCVFPIDLAK Deamidation (N) 2227.2286 0.22862631 3112 Q9DB41 Slc25a18 Mitochondrial glutamate carrier 2 yes yes 0 1 0 0 11.3 1.25 1 1 1 107.56 107.56 3 1.6589E-11 33873 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.015 64.393 9.657 0 15.148 6.4455 15.073 24.259 9 0 14 6 15 23 1 0 1 1 2 2 4214.4 12498 3112 12041 29209;29210;29211 33938;33939;33940 33938 1080 3 LINGGIAGLVGVTCVFPIDLAK Unmodified 2226.2446 0.24461073 3112 Q9DB41 Slc25a18 Mitochondrial glutamate carrier 2 yes yes 0 0 0 0 12 0 1 103.12 103.12 4 6.7433E-08 28944 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.276 44.97 0 7.448 0 0 9.0934 9.3345 0 7 0 0 9 9 0 1 0 0 1 1 937 12499 3112 12041 29212 33941 33941 1 LINIDFTDPDESK Unmodified 1505.725 0.72495394 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 6 0 1 79.204 79.204 3 0.01034 29195 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.115 23.07 20.081 48.191 27.689 39.349 28.434 20.254 19 47 28 38 28 19 1 2 1 2 1 1 2305.3 12500 3259 12042 29213 33942;33943 33943 2 LININVLSVCK Unmodified 1271.7271 0.72714296 1260 O70503 Hsd17b12 Very-long-chain 3-oxoacyl-CoA reductase yes yes 0 0 0 0 12 0 1 80.346 80.346 3 0.052578 21934 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 37.426 18.68 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 4658.9 12501 1260 12043 29214 33944 33944 1 LINNAIK Unmodified 784.48069 0.48068833 1401;1400 P17426;P17427;A0A0J9YUA7 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 10.5 1.5 1 2 1 54.154 54.154 2;3 0.0063571 13369 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.359 32.671 588.85 402.53 598.33 435.98 655.17 654.56 554 421 596 439 667 629 4 3 4 3 4 3 113970 12502 1400;1401 12044 29215;29216;29217;29218 33945;33946;33947;33948 33947 4 LINQPLPDLK Unmodified 1149.6758 0.67575932 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 9.25 2.28 1 1 1 1 70.485 70.485 2;3 0.0016452 26057 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.893 44.55 226.94 272.48 283.81 369.48 434.62 373.74 213 268 287 361 444 361 3 3 3 4 4 3 96846 12503 1424 12045 29219;29220;29221;29222 33949;33950;33951;33952 33952 4 LINRPIIVFR Unmodified 1239.7816 0.7815618 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 1 7 6 1 1 63.362 63.362 3 0.004482 22522 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.552 44.815 0 265.09 309.06 258.91 306.1 273.76 0 254 311 259 313 265 0 2 2 2 2 2 92634 12504 2131 12046 29223;29224 33953;33954 33954 2 LINSLYPPGQEPIPK Unmodified 1664.9138 0.91375776 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 10 2.16 2 2 2 73.916 73.916 3;4 3.4642E-21 27713 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.46 77.61 326.02 342.94 322.12 213.42 546.79 465.51 306 343 315 199 537 449 5 6 4 3 6 6 70034 12505 3315 12047 29225;29226;29227;29228;29229;29230 33955;33956;33957;33958;33959;33960;33961;33962;33963;33964 33964 10 LINSMVAEFLK Unmodified 1263.6897 0.68969482 2996 Q9CYT6;D3YTR7 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 11 0.707 1 2 1 94.777 94.777 2;3 1.2613E-07 31117 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.63 70.636 39.58 0 90.162 28 15.69 29.848 37 0 87 28 15 28 1 0 3 1 1 1 21630 12506 2996 12048 29231;29232;29233;29234 33965;33966;33967;33968 33965 4 LIPADNEK Unmodified 898.476 0.47599688 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 51.651 51.651 2 0.006133 16839 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.22 55.453 288 264.67 63.491 219.16 292.24 44.772 270 268 65 209 287 42 3 3 1 3 2 1 31277 12507 2433 12049 29235;29236;29237 33969;33970;33971 33971 3 LIPDSIGK Unmodified 841.49092 0.49091866 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 8 0 1 64.022 64.022 2 0.017592 20493 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.713 12.681 146.97 133.76 252.64 82.65 209.59 0 139 139 245 93 204 0 1 1 1 1 1 0 9121.4 12508 1844 12050 29238 33972 33972 1 LIPEDGPAAHSPEQVQR Unmodified 1842.9224 0.92242497 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 7.33 4.03 1 1 1 47.397 47.397 3 1.2616E-18 15142 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.84 101.77 108.99 159.05 38.86 59.981 153.1 59.696 102 157 37 56 149 56 2 4 1 1 3 1 27507 12509 628 12051 29239;29240;29241 33973;33974;33975;33976 33974 4 LIPLITSNCTSK Unmodified 1345.7275 0.72753689 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 11.5 0.5 1 1 72.166 72.166 3 3.348E-08 18575 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.85 89.101 99.374 58.546 131.9 106.46 70.533 117.38 93 56 130 102 74 112 1 1 2 1 1 2 21881 12510 934 12052 29242;29243 33977;33978 33978 2 LIPMEHVQLPDCVLQYEEQR Unmodified 2496.2141 0.21411524 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 0 7 0 1 77.806 77.806 3 0.027 27583 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 30.152 21.333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12511 2403 12053 29244 33979 33979 1 LIPSWTTVILVK Unmodified 1368.8381 0.83807362 2679 Q8VBY2 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 0 0 0 0 12 0 1 93.414 93.414 3 0.0015029 26779 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.676 27.246 0 0 0 20.443 17.231 49.61 0 0 0 19 19 47 0 0 0 1 1 1 2375 12512 2679 12054 29245 33980 33980 1 LIPVILPPEPR Unmodified 1242.77 0.76999406 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 0 9.5 0.5 1 1 80.343 80.343 2 4.8876E-05 25281 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.653 59.651 79.262 66.839 18.214 61.208 48.116 118.33 74 65 19 56 46 111 2 2 1 2 1 2 10923 12513 896 12055 29246;29247 33981;33982;33983 33983 3 LIPVPMVGFK Unmodified 1099.6464 0.64637345 2456 Q8BTS4 Nup54 Nuclear pore complex protein Nup54 yes yes 0 0 0 0 1 0 1 86.164 86.164 3 0.0074171 30589 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.982 35.22 20.265 0 40.141 19.594 19.197 19.706 19 0 38 19 19 19 1 0 2 1 1 1 1016.8 12514 2456 12056 29248 33984;33985 33985 2 LIQALALK Unmodified 868.57459 0.57458871 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 74.731 74.731 2 0.0075682 19505 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.12 46.539 0 0 144.75 126.72 65.015 165.51 0 0 139 120 65 157 0 0 2 1 1 2 32465 12515 2235 12057 29249;29250 33986;33987 33987 2 LIQEQHPEEELIK Unmodified 1604.841 0.84098675 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 3.27 1 1 2 1 1 57.839 57.839 3;4 4.3325E-19 19689 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.39 82.838 473.41 557.96 830.76 820.53 807.83 651.5 445 558 821 791 818 623 7 6 6 7 6 6 202880 12516 551 12058 29251;29252;29253;29254;29255;29256 33988;33989;33990;33991;33992;33993;33994;33995;33996 33996 9 LIQFLQASITER Unmodified 1417.7929 0.79291434 1080 G3X9A7;Q8BLJ3 Plcxd3 PI-PLC X domain-containing protein 3 yes no 0 0 0 0 12 0 1 88.618 88.618 3 0.00068899 25175 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.924 42.828 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 4138.1 12517 1080 12059 29257 33997 33997 1 LIQHAQIPPEDSEIITNMAHLGVPIVTDSTLR Unmodified 3507.8396 0.83955354 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 8.2 2.48 1 2 1 1 85.437 85.437 4;5 1.4984E-09 32015 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.482 47.702 148.36 93.261 123.17 148.27 172.59 136.62 139 93 120 141 176 131 6 6 6 5 6 4 56964 12518 1160 12060 29258;29259;29260;29261;29262 33998;33999;34000;34001;34002;34003;34004;34005;34006;34007;34008 34001 11 LIQIPQLPENPPNFLR Unmodified 1888.0571 0.057067954 2694 Q8VD75;A0A0J9YV08;A0A1D5RMM7 Hip1 Huntingtin-interacting protein 1 yes no 0 0 0 0 10 0 1 88.56 88.56 3 0.00068428 28445 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.403 31.846 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 7081.6 12519 2694 12061 29263 34009 34009 1 LIQLMEEIMAEK Unmodified 1446.7462 0.74622343 1963 Q501J6;Q3U741;Q3TU25 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 9 0 1 107.32 107.32 3 0.0019545 37213 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.951 34.418 9.6335 4.6704 0 0 0 0 9 5 0 0 0 0 1 1 0 0 0 0 525.55 12520 1963 12062 29264 34010 34010 1 LIQNLGPVK Unmodified 980.60187 0.6018661 1587 P49442 Inpp1 Inositol polyphosphate 1-phosphatase yes yes 0 0 0 0 10 0.816 1 1 1 63.695 63.695 2 3.1473E-07 17024 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.67 82.22 157.39 185.96 79.622 144.2 158.64 0 148 186 83 139 158 0 2 2 1 2 2 0 22707 12521 1587 12063 29265;29266;29267 34011;34012;34013 34013 3 LIQNNHYAMEDVATR Deamidation (N) 1774.8308 0.83083277 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 4.5 0.5 1 1 57.087 57.087 3 0.002185 19346 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.862 39.4 138.6 31.926 122.68 102.08 111.42 0 130 37 120 102 111 0 2 1 2 2 2 0 8067 12522 551 12064 29268;29269 34014;34015 34015 152 2 LIQNWFVR Unmodified 1074.5974 0.59744942 525 A2AUG7;Q8BH55 Thnsl1 Threonine synthase-like 1 yes no 0 0 0 0 6.5 5.5 1 1 76.412 76.412 2 0.0080271 20357 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.92 59.226 148.64 100.53 0 109.31 115.57 233.35 139 102 0 102 120 222 2 1 0 2 1 2 17973 12523 525 12065 29270;29271 34016;34017 34017 2 LIQSHPESAEDLKEK Unmodified 1722.8788 0.87882882 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 5 0 1 50.541 50.541 4 0.00082822 16322 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.377 45.633 118.6 100.53 0 130.27 105.47 135.57 111 102 0 121 111 130 1 1 0 1 1 1 16039 12524 551 12066 29272 34018 34018 1 LIQYCHSK Unmodified 1047.5172 0.51715019 774 D3Z494;G5E895;P45377 Akr1b10;Akr1b8 Aldose reductase-related protein 2 yes no 0 0 0 0 10 0 1 43.263 43.263 3 0.0094 9083 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.485 32.164 59.883 40.65 0 0 79.673 86.204 56 42 0 0 79 83 1 1 0 0 1 1 5381.2 12525 774 12067 29273 34019 34019 1 LISASLFLR Unmodified 1018.6175 0.61751616 992;528 F6RK07;A2AUX5;A2AUX3;B7ZD29;Q3UHC7;F6QQP6;F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Dab2ip;Syngap1 Disabled homolog 2-interacting protein;Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 1 0 1 79.802 79.802 2 0.0002539 27747 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 129.72 78.824 45.859 17.65 32.171 26.092 21.709 33.493 43 20 32 26 23 32 1 1 1 1 1 1 5065 12526 528;992 12068 29274 34020 34020 1 LISDIIR Unmodified 828.5069 0.50690308 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 13 0 1 66.876 66.876 2 0.032734 24473 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.097 12.956 99.213 0 96.848 73.59 80.808 76.578 93 0 93 74 83 74 1 0 1 1 1 1 13427 12527 1994 12069 29275 34021 34021 1 LISDINK Unmodified 801.45962 0.45961853 2148;2186 Q68FG2;Q62261;A0A0A0MQG2 Sptbn2;Sptbn1 Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 9.25 2.28 1 1 1 1 57.182 57.182 2;3 0.0053482 16602 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.692 25.658 1287.5 659.83 1447.8 980.4 1117.8 1380.6 1211 697 1421 982 1157 1324 4 2 4 2 4 3 136830 12528 2186;2148 12070 29276;29277;29278;29279 34022;34023;34024;34025 34024 4 LISEVIGER Unmodified 1014.571 0.5709599 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 6 0 1 65.82 65.82 2 0.042454 22841 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.55 15.262 48.655 64.822 63.251 66.097 62.635 67.503 46 65 65 65 65 65 1 1 1 1 1 1 16769 12529 1368 12071 29280 34026 34026 1 LISLHSLCLR Unmodified 1210.6856 0.6856125 2606 Q8K377 Lrrtm1 Leucine-rich repeat transmembrane neuronal protein 1 yes yes 0 0 0 0 12 0 1 64.324 64.324 3 5.3472E-06 15702 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.556 55.997 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12530 2606 12072 29281 34027 34027 1 LISLTDENALAGNEELTVK Unmodified 2029.0579 0.057915394 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 6 0 1 80.508 80.508 4 0.0069885 29704 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.888 20.971 29.697 37.993 26.135 38.883 0 39.442 28 38 28 37 0 37 1 1 1 1 0 1 1454.3 12531 1324 12073 29282 34028 34028 1 LISLTSALDDNKDGNINIDDLVK Unmodified 2485.2912 0.29116281 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 1 8 0 1 87.312 87.312 4 6.5421E-16 31509 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.276 72.716 59.582 45.209 46.759 0 0 39.442 56 47 46 0 0 37 1 1 1 0 0 1 1397.5 12532 3395 12074 29283 34029 34029 1 LISQIVSSITASLR Unmodified 1486.8719 0.87189295 1313;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;Q9JJZ2 Tuba4a;Tuba1b;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-8 chain no no 0 0 0 0 13 0 2 104.51 104.51 2;3 5.3843E-36 42613 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 177.38 140.53 238.22 64.479 123.19 246.97 18.936 217.46 223 65 120 233 19 204 4 1 1 4 1 2 158850 12533 44;1313;3223 12075 29284;29285 34030;34031;34032;34033 34031 4 LISSDGHEFIVK Unmodified 1343.7085 0.70851601 7 A0A087WQE6;A0A087WNT1;P83940;A0A087WPE4 Tceb1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 0 7 0 1 62.878 62.878 3 2.527E-12 20594 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.77 61.013 117.61 97.781 168.5 128.79 173.26 143.23 111 102 167 130 176 139 1 1 1 1 1 1 11648 12534 7 12076 29286 34034 34034 1 LISVCYFESENDWWVSK Unmodified 2160.9826 0.98264196 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 8 0 1 92.941 92.941 3 5.5397E-06 33747 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.619 69.126 24.478 12.862 22.947 23.437 17.79 29.34 23 14 23 23 19 28 1 1 1 1 1 1 1729.4 12535 3303 12077 29287 34035 34035 1 LISWYDNEYGYSNR Unmodified 1778.79 0.79001381 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 9.64 2.27 1 1 2 2 1 1 1 2 72.949 72.949 2;3 8.3416E-81 27260 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 219.89 204 838.15 839.22 956.78 956.85 1027.5 1256.1 788 853 954 924 1039 1203 9 11 10 10 10 11 1647900 12536 1395;3448 12078 29288;29289;29290;29291;29292;29293;29294;29295;29296;29297;29298 34036;34037;34038;34039;34040;34041;34042;34043;34044;34045;34046;34047;34048;34049 34048 14 LISWYDNEYGYSNR Deamidation (N) 1779.774 0.77402939 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 8.29 3.01 3 2 2 74.781 74.781 2;3 1.6461E-16 26251 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.77 126.38 40.536 48.367 113.67 86.222 148.26 68.3 38 46 111 84 148 65 2 1 3 3 4 2 75943 12537 1395;3448 12078 29299;29300;29301;29302;29303;29304;29305 34050;34051;34052;34053;34054;34055;34056 34054 467;468 7 LITAIGDVVNHDPAVGDR Unmodified 1860.9694 0.96937516 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6 0 1 72.176 72.176 3 1.6308E-05 25805 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.243 48.919 29.652 46.501 26.54 18.327 45.635 47.734 28 46 28 19 46 46 1 1 1 1 1 1 5480.9 12538 3331 12079 29306 34057 34057 1 LITAVVMK Unmodified 873.53576 0.53576037 2001 Q3UPL0;S4R2A9;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 11.5 0.5 1 1 70.178 70.178 2 1.1709E-11 17849 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 138.9 68.627 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 6886.1 12539 2001 12080 29307;29308 34058;34059 34059 2 LITEDVQGK Unmodified 1001.5393 0.53932542 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 8 3.56 1 1 1 55.354 55.354 2;3 0.00043979 18672 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.82 36.065 177.54 182.81 181.39 126.25 274.75 298.1 167 185 176 121 278 287 2 2 2 2 3 3 15602 12540 1844 12081 29309;29310;29311 34060;34061;34062 34062 3 LITEEASK Unmodified 889.47566 0.47566253 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 8 3.56 1 1 1 50.679 50.679 2;3 0.0032519 15740 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.548 38.036 287.19 204.46 249.84 182.47 295.1 209.04 270 213 251 185 297 204 3 2 2 2 3 3 37040 12541 307 12082 29312;29313;29314 34063;34064;34065 34064 3 LITEEASKR Unmodified 1045.5768 0.57677356 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 1 6.5 0.5 1 1 42.639 42.639 3 0.00058368 11085 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.52 62.438 1028.4 732.81 1278.6 797.99 1114.8 1314.5 969 774 1260 819 1144 1263 2 2 2 2 2 2 78936 12542 307 12083 29315;29316 34066;34067 34067 2 LITLEEEMTK Unmodified 1205.6213 0.62134049 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 13 0 1 74.418 74.418 2 0.063286 28189 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.791 15.353 0 0 0 69.827 64.782 0 0 0 0 65 65 0 0 0 0 1 1 0 4106.6 12543 1331 12084 29317 34068 34068 1 LITLEQGK Unmodified 900.52803 0.52803245 3170 Q9EQ20;A0A1Y7VJ32 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes no 0 0 0 0 9 0 1 60.947 60.947 3 0.010015 18323 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.21 25.05 0 98.952 0 119.33 105.97 135.56 0 93 0 111 111 130 0 1 0 1 1 1 7181.1 12544 3170 12085 29318 34069 34069 1 LITPAVVSER Unmodified 1083.6288 0.62880913 289 A0A1L1SQA8;P62852 Rps25 40S ribosomal protein S25 yes no 0 0 0 0 8 0 1 58.918 58.918 2 0.01917 18066 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.931 2.3716 69.745 0 0 127.91 172.97 152.83 65 0 0 120 176 148 1 0 0 1 1 1 14633 12545 289 12086 29319 34070 34070 1 LITPIIYIK Unmodified 1072.6896 0.68961847 787 D3Z7E5;Q2NL51 Gsk3a Glycogen synthase kinase-3 alpha yes no 0 0 0 0 6.5 5.5 1 1 83.414 83.414 3 0.0006699 23029 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.657 51.114 0 0 40.034 0 29.288 37 0 0 37 0 28 37 0 0 1 0 1 1 8553.3 12546 787 12087 29320;29321 34071;34072 34072 2 LITQTFNHHNQLAQK Unmodified 1791.938 0.93801545 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 10 0 1 48.164 48.164 4 1.0539E-07 10994 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.83 87.479 33.995 31.239 110.96 37.853 133.67 168.88 32 32 106 37 135 162 1 1 2 1 2 2 10554 12547 1207 12088 29322 34073;34074 34074 2 LITTALKR Unmodified 914.5913 0.59130141 2857 Q99LB2;A0A2I3BRQ8;A0A2I3BPY3;Q9D2U3 Dhrs4 Dehydrogenase/reductase SDR family member 4 yes no 0 0 0 1 12 0 1 51.847 51.847 3 0.0023283 11000 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.39 48.295 0 0 167.35 129.49 139.45 0 0 0 160 130 139 0 0 0 1 1 1 0 7426.9 12548 2857 12089 29323 34075 34075 1 LITWYNPLSAPELELDQAGENSVANWR Deamidation (N) 3086.4985 0.49852982 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 1 0 0 9 0 1 98.749 98.749 3 0.00023489 35307 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.625 34.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12549 240 12090 29324 34076 34076 77 1 LIVAMMK 2 Oxidation (M) 836.44998 0.44998183 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 2 0 8.5 0.5 1 1 61.078 61.078 2 0.040594 18346 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.055 24.591 0 242.52 259.03 171.55 286.24 298.84 0 232 255 176 291 288 0 2 1 2 2 2 29528 12550 1577 12091 29325;29326 34077;34078 34078 105;106 2 LIVAVEQEEIPR Unmodified 1394.7769 0.77692993 2774 Q91YP0 L2hgdh L-2-hydroxyglutarate dehydrogenase, mitochondrial yes yes 0 0 0 0 5 0 1 70.257 70.257 3 0.00033339 25471 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.786 52.212 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1053 12551 2774 12092 29327 34079 34079 1 LIVDAFLQQLPNCVNR Unmodified 1899.0037 0.003652175 518 A2AT37 Upf2 yes yes 0 0 0 0 12 0 1 93.061 93.061 3 0.000603 26637 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.335 40.459 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2207.1 12552 518 12093 29328 34080 34080 1 LIVDEAINEDNSVVSLSQPK Unmodified 2169.1165 0.11649291 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 7.33 4.03 1 1 1 79.641 79.641 3;4 2.6391E-13 30096 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.66 79.109 99.628 0 27.106 118.51 63.563 37.628 93 0 28 111 65 37 2 0 1 2 1 1 22361 12553 1875 12094 29329;29330;29331 34081;34082;34083 34082 3 LIVENLSSR Unmodified 1029.5819 0.58185893 1940;1187 Q3TWW8;Q9D8S5;O35326 Srsf6;Srsf5 Serine/arginine-rich splicing factor 6;Serine/arginine-rich splicing factor 5 no no 0 0 0 0 8.5 0.5 1 1 58.097 58.097 2 0.00092294 17725 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.88 56.106 99.029 266.27 157.33 239.09 213.27 231.63 93 259 158 231 222 223 1 2 1 2 2 2 28420 12554 1940;1187 12095 29332;29333 34084;34085 34084 2 LIVGTAGR Unmodified 785.47594 0.4759373 234 A0A140LHA2;Q9WVA3 Bub3 Mitotic checkpoint protein BUB3 yes no 0 0 0 0 9 0 1 47.053 47.053 2 0.025072 11844 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.243 26.185 0 0 120.1 0 0 148.17 0 0 111 0 0 139 0 0 1 0 0 1 36878 12555 234 12096 29334 34086 34086 1 LIVNLMR Unmodified 857.51569 0.51569363 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 1 0 1 69.625 69.625 2 0.032776 23611 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.064 27.973 45.579 22.269 75.256 0 57.278 37.808 43 25 71 0 56 37 1 1 1 0 1 1 8600.7 12556 1050;1380 12097 29335 34087 34087 1 LIVPFCGHIK Unmodified 1182.6583 0.65833512 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 0 0 0 0 6 5 1 1 65.14 65.14 3 0.0001234 17655 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.358 79.105 249.86 39.368 385.01 40.441 301.86 326.11 235 37 357 37 298 314 1 1 1 1 1 2 39606 12557 2709 12098 29336;29337 34088;34089 34089 2 LIVPNSTAGLIIGK Unmodified 1394.8497 0.84970094 332 A0A1W2P872;D3YVV7 Nova2 yes no 0 0 0 0 11 0.816 1 1 1 78.719 78.719 2;3 2.1155E-07 24121 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.38 0 39.564 27.124 0 12 92.807 38.106 37 28 0 12 92 37 1 1 0 1 2 1 18060 12558 332 12099 29338;29339;29340 34090;34091;34092 34091 3 LIVPSEFKPTSPNR Unmodified 1583.8671 0.86714192 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 1 10 0 1 61.929 61.929 3 0.00017447 16856 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.515 55.417 180.91 112.85 157.14 137.78 254.12 0 170 120 158 139 249 0 1 1 1 1 1 0 28962 12559 935 12100 29341 34093 34093 1 LIVQFGSSK Unmodified 977.55458 0.55458155 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 11 0 1 66.115 66.115 3 0.0011133 18214 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.749 59.92 0 0 0 0 112.48 105.52 0 0 0 0 111 102 0 0 0 0 1 1 20023 12560 1506 12101 29342 34094 34094 1 LIVSSSSQAPVIYQWSR Unmodified 1920.0105 0.010511692 2615 Q8K406 Lgi3 Leucine-rich repeat LGI family member 3 yes yes 0 0 0 0 10 0 1 74.883 74.883 3 0.00016676 22623 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.688 40.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12561 2615 12102 29343 34095 34095 1 LIVTFDEHVISNNFK Deamidation (N) 1775.9094 0.90940066 488 A2ALS5;A2ALS4;A2ALS3 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 1 0 0 9 0 1 76.467 76.467 3 0.001954 25701 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.901 42.536 39.174 26.039 66.507 46.314 0 49.036 37 28 65 46 0 46 1 1 1 1 0 1 2989.1 12562 488 12103 29344 34096 34096 122 1 LIWGPHK Unmodified 849.48611 0.48610806 2001 Q3UPL0 Sec31a Protein transport protein Sec31A yes yes 0 0 0 0 11.5 0.5 1 1 55.025 55.025 3 0.0046042 13482 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.98 46.969 0 311.21 223.51 205.77 446.05 77.019 0 296 229 207 438 74 0 2 1 1 2 1 38473 12563 2001 12104 29345;29346 34097;34098 34097 2 LIYFQLHR Unmodified 1088.6131 0.61309948 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 6.5 5.5 1 1 63.185 63.185 3 0.0010031 15226 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.78 84.363 0 44.306 22.843 34.184 27.857 23.723 0 42 23 33 28 23 0 2 1 2 1 1 7982.9 12564 2151 12105 29347;29348 34099;34100 34100 2 LIYQWVSR Unmodified 1063.5815 0.581465 422 A2A4K0;Q9CQ80;A8XY17;A2A4J8 Vps25 Vacuolar protein-sorting-associated protein 25 yes no 0 0 0 0 6.5 5.5 1 1 70.746 70.746 2 0.0054193 24082 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.794 35.222 127.14 127 164.43 179.61 157.02 0 120 130 167 176 158 0 1 1 1 1 1 0 20418 12565 422 12106 29349;29350 34101;34102 34101 2 LIYVTEESMNK Oxidation (M) 1341.6486 0.64861787 1153 L7N216 Speer4d yes yes 0 0 1 0 9 0 1 57.314 57.314 3 0.045623 16705 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.359 15.552 123.79 134.23 0 0 0 0 116 134 0 0 0 0 1 1 0 0 0 0 9794.2 12566 1153 12107 29351 34103 34103 52 1 LIYYGGVQPEIR Unmodified 1406.7558 0.75580056 619 B2RQR5;Q8BPQ7;D3Z7V4;D3YUT7 Sgsm1 Small G protein signaling modulator 1 yes no 0 0 0 0 9 0 1 67.7 67.7 3 0.023162 21549 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.71 20.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12567 619 12108 29352 34104 34104 1 LKAPGGPVSAFLGIPFAEPPVGSR Unmodified 2363.3002 0.30015177 80 A0A0G2JDM6;P21836 Ache Acetylcholinesterase yes no 0 0 0 1 12 0 1 86.178 86.178 3 2.968E-13 24124 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.426 72.312 15 4.3085 0 0 0 0 14 5 0 0 0 0 1 1 0 0 0 0 3055.5 12568 80 12109 29353 34105 34105 1 LKATVTPSPVK Unmodified 1139.6914 0.69140938 31 A0A087WRY3;Q80XU3 Nucks1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 yes no 0 0 0 1 11 0 1 49.468 49.468 3 0.018762 11454 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.576 31.204 29.904 27.776 0 34.976 0 0 28 28 0 32 0 0 1 1 0 1 0 0 4738.4 12569 31 12110 29354 34106 34106 1 LKDDEVAQLR Unmodified 1185.6354 0.63535107 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 1 8 3.56 1 1 1 49.126 49.126 3 0.00061539 15164 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.258 63.322 1855.5 1287.5 1742.3 1523.6 2141 1683.9 1745 1355 1753 1512 2169 1637 5 5 5 4 5 5 315940 12570 1389 12111 29355;29356;29357 34107;34108;34109;34110;34111 34110 5 LKDFNVGDYIEAVLDR Unmodified 1865.9523 0.95232811 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 9.25 2.28 1 1 1 1 93.374 93.374 3 2.2135E-05 36864 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.545 52.896 119.7 98.485 107.58 115.84 145.69 91.322 112 93 102 111 144 88 3 2 3 3 3 2 45993 12571 2555 12112 29358;29359;29360;29361 34112;34113;34114;34115;34116;34117 34117 6 LKDFNVGDYIEAVLDR Deamidation (N) 1866.9363 0.9363437 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 1 0 1 10 0 1 93.429 93.429 3 0.0018123 30431 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.7 28.717 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12572 2555 12112 29362 34118 34118 942 1 LKDGSLFWQSPK Unmodified 1404.7402 0.74015049 736 D3Z061;Q8C7R4 Uba6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 1 10 0 1 66.868 66.868 3 0.010724 19031 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.98 26.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12573 736 12113 29363 34119 34119 1 LKDHYLEFEK Unmodified 1320.6714 0.67140222 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 1 7.5 0.5 1 1 58.169 58.169 4 0.0027303 18523 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.069 44.464 179.01 265.03 151.06 351.02 268.06 222.79 168 259 158 334 279 213 3 3 2 4 4 2 16504 12574 814 12114 29364;29365 34120;34121;34122;34123 34120 4 LKDLEALLNSK Unmodified 1242.7184 0.71835242 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 1 9.5 0.5 1 1 80.507 80.507 3 0.0026906 25249 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.513 30.148 304.86 240.16 316.3 192.77 141.7 301.9 287 250 315 185 148 287 2 2 2 1 1 2 17867 12575 1580 12115 29366;29367 34124;34125 34125 2 LKDLNSQADSLMTSSAFDTSQVK Unmodified 2485.2006 0.20063324 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7 0.816 1 1 1 73.876 73.876 3;4 5.6845E-10 25618 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.375 48.826 29.407 66.649 95.229 28.063 46.827 0 28 66 93 28 46 0 1 2 2 1 1 0 11849 12576 551 12116 29368;29369;29370 34126;34127;34128 34127 3 LKDSEAELQR Unmodified 1187.6146 0.61461563 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 5 0 1 43.99 43.99 3 0.0016614 13045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.821 53.948 285.42 0 0 276.64 458.85 462.34 266 0 0 261 466 446 1 0 0 1 1 1 26488 12577 879 12117 29371 34129 34129 1 LKEELIDAIR Unmodified 1198.6921 0.69213767 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173;E9QKR1 Enah Protein enabled homolog yes no 0 0 0 1 8 0 1 71.759 71.759 3 0.023838 24117 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.776 12.032 39.034 65.584 56.46 0 0 69.29 37 65 56 0 0 65 1 1 1 0 0 1 3764.3 12578 56 12118 29372 34130 34130 1 LKEIVTNFLAGFEP Unmodified 1576.8501 0.85009487 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 7.79 5.47 11 14 3 120.24 120.24 3 1.1868E-07 35825 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.42 65.314 241.77 198.06 360.82 269.69 204.32 342.17 229 199 349 262 202 323 18 16 21 20 17 23 129570 12579 1881 12119 29373;29374;29375;29376;29377;29378;29379;29380;29381;29382;29383;29384;29385;29386;29387;29388;29389;29390;29391;29392;29393;29394;29395;29396;29397;29398;29399;29400 34131;34132;34133;34134;34135;34136;34137;34138;34139;34140;34141;34142;34143;34144;34145;34146;34147;34148;34149;34150;34151;34152;34153;34154;34155;34156;34157;34158;34159;34160;34161;34162;34163;34164;34165;34166;34167;34168;34169;34170;34171;34172;34173;34174;34175;34176;34177;34178;34179;34180 34145 50 LKEIVTNFLAGFEP Deamidation (N) 1577.8341 0.83411046 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 1 8.5 0.5 1 1 96.434 96.434 3 0.00059612 34516 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.089 58.953 28.657 0 0 0 18.187 18.669 28 0 0 0 18 18 2 0 0 0 2 2 7297.4 12580 1881 12119 29401;29402 34181;34182;34183 34183 767 3 LKELAALWLSDNQSK Unmodified 1714.9254 0.92538508 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 1 12 0 1 89.792 89.792 3 0.0033032 25623 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.168 42.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12581 82 12120 29403 34184 34184 1 LKELIITAGGENVPPVPIEEAVK Unmodified 2415.3625 0.36247726 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 1 8 0 1 91.114 91.114 4 0.0002567 32991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.578 42.845 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 898.48 12582 2890 12121 29404 34185 34185 1 LKENLYPYLGPSTLR Unmodified 1762.9618 0.96177059 1849 P97390 Vps45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 1 10.5 0.5 1 1 67.838 67.838 3 0.0028214 18931 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.148 35.373 78.935 92.565 0 71.045 48.116 0 74 92 0 65 46 0 2 2 0 1 1 0 22365 12583 1849 12122 29405;29406 34186;34187 34187 2 LKENQEFVNFR Unmodified 1422.7256 0.72556306 1238 O55126;Q7TMG8 Gbas Protein NipSnap homolog 2 yes no 0 0 0 1 10.5 2.5 1 1 55.104 55.104 3 0.0024132 16495 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.554 46.656 286.66 178.57 0 257.96 289.96 288.07 268 186 0 241 298 278 2 2 0 2 2 2 34173 12584 1238 12123 29407;29408 34188;34189 34188 2 LKETAESVLK Unmodified 1116.639 0.63903946 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 8 0 2 62.268 62.268 3;4 0.0050397 19697 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.229 31.208 268.86 199.16 268.95 76.118 323.54 406.51 253 203 264 74 326 390 2 1 2 1 2 2 23246 12585 1957 12124 29409;29410 34190;34191 34191 2 LKETQPGEAYVIQK Unmodified 1602.8617 0.86172219 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 9.25 2.28 1 1 1 1 55.311 55.311 3 9.9019E-07 16476 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.61 72.654 197.63 231.56 180.93 287.8 280.21 328.86 186 233 185 278 288 316 3 4 3 4 3 4 37610 12586 1382 12125 29411;29412;29413;29414 34192;34193;34194;34195 34193 4 LKETSENALK Unmodified 1131.6136 0.61355299 1581 P48722;E0CY23;A0A0N4SVU2 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 1 7 0 1 48.789 48.789 3 6.9659E-05 13943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.43 64.65 139.19 59.775 0 149.57 125.5 105.15 130 65 0 139 130 102 1 1 0 1 1 1 8792.4 12587 1581 12126 29415 34196 34196 1 LKEVFSIAGTVK Unmodified 1290.7547 0.75473792 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 1 11.5 0.5 1 1 73.897 73.897 3 0.0016831 21659 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.472 38.502 0 0 0 192.37 0 168.43 0 0 0 176 0 158 0 0 0 1 0 1 18701 12588 521 12127 29416;29417 34197;34198 34197 2 LKEVLLVLK Unmodified 1053.7162 0.71616757 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 1 12 0 1 83.797 83.797 3 0.010778 23206 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.334 9.7442 0 38.443 55.314 66.704 55.512 0 0 37 56 65 56 0 0 1 1 1 1 0 4178.4 12589 823 12128 29418 34199 34199 1 LKFPSGNYPPCLDDTR Unmodified 1878.8934 0.89343302 1292 O89112 Lancl1 LanC-like protein 1 yes yes 0 0 0 1 9 0 1 63.045 63.045 3 0.0022177 19123 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.93 39.026 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 3522.2 12590 1292 12129 29419 34200 34200 1 LKGDSVVLK Unmodified 957.58588 0.58588168 195 G3UYZ1;A0A0R4J117;Q8R366;D3Z4Q8 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 1 9 0 1 52.906 52.906 3 0.0035689 14475 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.417 22.509 526.84 0 0 425.18 0 0 491 0 0 389 0 0 1 0 0 1 0 0 43129 12591 195 12130 29420 34201 34201 1 LKGEAEYQEIR Unmodified 1334.683 0.68302954 3230 Q9JKF6 Pvrl1 Nectin-1 yes yes 0 0 0 1 6 0 1 47.197 47.197 3 0.03899 14014 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.701 23.633 59.663 84.289 0 48.92 72.189 86.418 56 83 0 46 74 83 1 1 0 1 1 1 4037.8 12592 3230 12131 29421 34202 34202 1 LKGELTPNLHPPETIADGVK Unmodified 2128.1528 0.15281883 3297 Q9QZX7 Srr Serine racemase yes yes 0 0 0 1 13 0 1 61.651 61.651 4 0.018069 22206 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.689 18.746 87.86 110.37 107.98 113.59 69.216 86.503 83 111 111 111 74 83 1 1 1 1 1 1 11890 12593 3297 12132 29422 34203 34203 1 LKGEMMDLQHGSLFLQTPK Unmodified 2172.1071 0.10713097 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 1 9 1 1 1 74.088 74.088 4 0.011242 22054 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.276 23.684 49.053 129.69 0 55.743 66.005 127.1 46 125 0 51 65 121 1 2 0 1 1 2 10434 12594 1389 12133 29423;29424 34204;34205 34205 2 LKGIVPLAK Unmodified 937.63244 0.63243794 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 1 6.5 5.5 1 1 63.082 63.082 3 0.037534 21329 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.683 32.736 492.79 199.64 503.99 384.76 144.87 67.514 463 217 495 382 148 65 3 2 3 3 2 1 29429 12595 1470 12134 29425;29426 34206;34207;34208 34206 3 LKGLALQR Unmodified 897.57599 0.5759857 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 12 0 1 49.932 49.932 3 0.015022 10175 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.692 12.405 769.62 656.89 1199.6 833.33 416.36 954.98 727 685 1183 835 466 907 1 1 1 1 1 1 59915 12596 551 12135 29427 34209 34209 1 LKGPLVR Unmodified 781.51741 0.51740818 2630 Q8R0A7;Q3TA40;Q8BQB5 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 1 11 0 1 44.546 44.546 3 0.036369 9432 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.803 33.5 0 266.75 400.57 0 0 0 0 257 385 0 0 0 0 1 1 0 0 0 30875 12597 2630 12136 29428 34210 34210 1 LKGPSLK Unmodified 741.47487 0.47487467 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 1 11 0 1 46.741 46.741 3 0.040193 10319 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.547 29.521 819.82 0 893.15 940.31 0 0 769 0 868 909 0 0 1 0 1 1 0 0 55111 12598 960 12137 29429 34211 34211 1 LKGSGNLEAIHVIK Unmodified 1477.8617 0.86166261 1823 P80314;A0A1W2P7B7 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 1 9.5 0.5 1 1 56.722 56.722 4 8.7583E-05 16455 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.669 45.231 0 184.23 297.42 94.742 194.39 397.4 0 176 289 93 195 378 0 1 2 1 1 2 23368 12599 1823 12138 29430;29431 34212;34213 34212 2 LKGSINELTQK Unmodified 1229.698 0.69795133 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 1 10 0 1 57.304 57.304 3 0.0032278 14847 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.498 34.435 48.74 55.344 57.026 0 58.576 0 46 56 56 0 56 0 1 1 1 0 1 0 2375.6 12600 2424 12139 29432 34214 34214 1 LKGYLISGSSYAR Unmodified 1413.7616 0.76161421 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 1 0 1 60.464 60.464 3 0.00027105 19917 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.486 51.005 48.81 44.747 54.202 77.652 0 78.884 46 46 56 74 0 74 1 1 1 1 0 1 10530 12601 2264 12140 29433 34215 34215 1 LKLPAVVTADLR Unmodified 1294.7973 0.79727144 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNK9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 1 11 0 1 68.119 68.119 2 0.041027 19206 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.551 31.36 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 6038 12602 3155 12141 29434 34216 34216 1 LKLPPIPVVPVSAQK Unmodified 1584.9967 0.99669953 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 1 6.5 5.5 2 2 74.961 74.961 3;4 0.00011771 25858 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.08 64.499 119.09 93.83 213.21 122.31 120.76 292.9 112 93 204 121 121 278 2 2 3 3 2 4 45388 12603 2994 12142 29435;29436;29437;29438 34217;34218;34219;34220 34217 4 LKNELFQR Unmodified 1046.5873 0.58727866 2127 Q61425 Hadh Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 1 9 0 1 52.856 52.856 3 0.042757 14469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.245 33.073 207.5 110.38 197.88 170.74 0 157.77 195 120 197 167 0 148 1 1 1 1 0 1 9751.3 12604 2127 12143 29439 34221 34221 1 LKPCPAGIIDQLSVIPNSNEPLK Unmodified 2502.3516 0.35159499 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 1 10 0 1 80.849 80.849 4 3.6803E-06 25480 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.342 34.622 39.613 17.545 0 30.604 0 0 37 19 0 28 0 0 1 1 0 1 0 0 4757.7 12605 2790 12144 29440 34222 34222 1 LKPDDATIPLLAAK Unmodified 1464.8552 0.85518025 341 A0A1Y7VL44;E9Q6P5 Ttc7b yes no 0 0 0 1 9 0 1 70.779 70.779 3 0.0044761 23021 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.648 42.931 0 146.48 84.48 165.15 133.55 124.11 0 139 93 158 139 120 0 1 1 1 1 1 6346.9 12606 341 12145 29441 34223 34223 1 LKPEGLHQLLAGFEDK Unmodified 1793.9676 0.96758424 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 1 10 0.816 1 1 1 76.015 76.015 4 5.8775E-05 23237 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.979 52.49 187.88 59.325 111.81 92.772 239.87 238.03 176 65 111 93 240 232 2 1 1 1 2 3 28876 12607 3089 12146 29442;29443;29444 34224;34225;34226 34225 3 LKPFGVQR Unmodified 943.56034 0.56033563 2781 Q91Z53;D6REG4;B1AXQ0 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 1 6 5 1 1 48.399 48.399 3 0.045278 14636 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.596 23.158 350.31 296.62 791.44 351.18 917.14 388.96 330 307 764 350 905 377 1 1 2 1 2 1 71281 12608 2781 12147 29445;29446 34227;34228 34227 2 LKPGTMIEWGNNWAR Unmodified 1771.8828 0.88280876 1237 O55125 Nipsnap1 Protein NipSnap homolog 1 yes yes 0 0 0 1 11 0.816 1 1 1 69.101 69.101 3 3.2652E-05 17438 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.71 62.131 299.08 214.55 407.39 199.08 191.21 105.07 282 227 398 204 190 102 3 3 3 2 2 1 64774 12609 1237 12148 29447;29448;29449 34229;34230;34231 34231 3 LKPGYLEATVDWFR Unmodified 1693.8828 0.88279198 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 1 10.5 1.5 1 2 1 80.096 80.096 3;4 0.00016001 30533 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.322 51.528 455.3 288.15 237.7 401.59 490.68 424.12 427 297 231 382 500 411 4 3 2 2 3 4 53639 12610 3085 12149 29450;29451;29452;29453 34232;34233;34234;34235 34235 4 LKPNLGNGADLPNYR Deamidation (N) 1641.8475 0.84746911 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 1 0 1 8 0 1 59.095 59.095 3 0.020575 18194 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.691 30.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12611 1207 12150 29454 34236 34236 329 1 LKPPFPADVGVFGCPTTVANVETVAVSPTICR Unmodified 3398.7367 0.73666838 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 1 10.4 1.5 2 1 1 1 84.45 84.45 4;5 2.5441E-07 26825 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.871 47.014 99.493 29.792 49.776 17.442 38.947 69.29 93 28 47 19 38 65 2 2 1 1 2 2 48671 12612 680 12151 29455;29456;29457;29458;29459 34237;34238;34239;34240;34241 34239 5 LKPPPPVAILPLGTGNDLAR Unmodified 2038.1939 0.19389579 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 1 11.5 0.5 2 2 74.738 74.738 3;4 1.7418E-08 19733 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.969 71.998 89.548 107.41 183.94 71.369 19.874 108.73 84 102 177 69 19 102 2 2 4 2 1 2 25962 12613 466 12152 29460;29461;29462;29463 34242;34243;34244;34245;34246 34246 5 LKPTNPAAQK Unmodified 1066.6135 0.61349341 265 A0A1B0GSX7;Q6PFD9;A0A1B0GRB5;A0A1B0GRA7;B2RQL0;A0A140T8J8 Nup98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 1 10 0 1 41.89 41.89 3 0.042247 8552 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.284 26.908 39.078 85.132 32.576 48.336 0 49.036 37 83 37 46 0 46 1 1 1 1 0 1 2970.3 12614 265 12153 29464 34247 34247 1 LKPVSPGTITCPLR Unmodified 1537.865 0.86503343 152 Q8CCJ4;A0A0R4J030;A0A286YD03 Amer2 APC membrane recruitment protein 2 yes no 0 0 0 1 11.5 0.5 1 1 57.199 57.199 3 0.0014303 13105 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.568 40.921 148.24 116.8 52.834 0 260.4 62.35 139 120 51 0 251 60 2 2 1 0 2 1 17453 12615 152 12154 29465;29466 34248;34249 34249 2 LKPWSLFDVLVEK Unmodified 1572.8916 0.89156576 196 A0A0R4J124;O54781 Srpk2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal yes no 0 0 0 1 11.5 0.5 1 1 95.23 95.23 3 0.0002627 27416 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.083 51.424 60.892 18.848 29.167 37.839 74.222 72.502 57 19 28 37 75 70 3 1 1 2 3 3 4661.2 12616 196 12155 29467;29468 34250;34251;34252 34252 3 LKQEYFVVAATLQDIIR Unmodified 2006.1201 0.12006214 2555;3331 Q8CI94;Q9WUB3;E9PUM3 Pygb;Pygm Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase no no 0 0 0 1 10.5 0.865 15 7 2 103.36 103.36 3;4 3.9516E-07 33508 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.67 86.227 183.58 220.75 58.562 201.65 149.37 265.1 174 213 58 192 147 251 8 12 4 11 8 11 71106 12617 2555;3331 12156 29469;29470;29471;29472;29473;29474;29475;29476;29477;29478;29479;29480;29481;29482;29483;29484;29485;29486;29487;29488;29489;29490;29491;29492 34253;34254;34255;34256;34257;34258;34259;34260;34261;34262;34263;34264;34265;34266;34267;34268;34269;34270;34271;34272;34273;34274;34275;34276;34277;34278;34279;34280;34281;34282;34283;34284;34285;34286 34262 34 LKQHFNNALPK Unmodified 1308.7303 0.73025451 67 A0A0A6YX71;Q6PGN3 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 1 11 0 1 47.455 47.455 4 0.0075195 10546 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.784 32.911 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5406.8 12618 67 12157 29493 34287 34287 1 LKQQSELQSQVR Unmodified 1442.7841 0.78414057 2140 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8;A2A6G6;A2A6H1;A2A6G5;E9Q0N6 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 1 8 0 1 42.066 42.066 3 5.1332E-05 10134 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.747 65.941 0 47.547 83.572 75.901 0 78.884 0 46 83 74 0 74 0 1 1 1 0 1 8165 12619 2140 12158 29494 34288 34288 1 LKSDTAAAAVR Unmodified 1101.6142 0.6142217 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 1 8.5 0.5 1 1 40.226 40.226 3 0.0021394 8871 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.685 32.105 337.4 309.27 663.95 647.21 618.96 847.93 318 318 659 639 648 812 1 1 2 2 2 2 62059 12620 1876 12159 29495;29496 34289;34290 34290 2 LKTLEVLLK Unmodified 1055.6954 0.69543213 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 1 11 0 1 70.211 70.211 3 0.013576 20199 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.283 0 0 96.446 149.89 100.08 131.38 0 0 93 148 102 130 0 0 1 1 1 1 0 6221.9 12621 305 12160 29497 34291 34291 1 LKTSPNEGLSGNPADLER Unmodified 1896.9541 0.95411902 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 1 7 0 1 52.938 52.938 3 0.00031501 15883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.081 39.551 59.922 0 27.857 47.969 34.482 58.712 56 0 28 46 37 56 1 0 1 1 1 1 4743.5 12622 1096 12161 29498 34292 34292 1 LKVPEWVDTVK Unmodified 1312.7391 0.73908786 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722;D3YUG3;S4R223 Rps19 40S ribosomal protein S19 yes no 0 0 0 1 9 0 1 69.275 69.275 3 0.0018539 22237 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.987 42.253 117.66 137.85 126.36 121.99 87.367 125.43 111 139 130 120 93 120 1 1 1 1 1 1 14497 12623 3013 12162 29499 34293 34293 1 LKVPPAINQFTQALDR Unmodified 1810.0101 0.010117761 1364 P12970 Rpl7a 60S ribosomal protein L7a yes yes 0 0 0 1 11 0.816 1 1 1 75.621 75.621 3 1.1263E-05 22527 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.902 60.171 189.11 96.886 54.815 103.4 221.96 38.4 177 102 56 97 218 38 4 3 2 2 5 2 22407 12624 1364 12163 29500;29501;29502 34294;34295;34296;34297;34298 34297 5 LKYENEVALR Unmodified 1233.6717 0.67173657 659 CON__P13645 yes yes 0 0 0 1 9.33 2.62 1 1 1 51.26 51.26 3 0.0012408 14352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.777 49.299 337.53 160.24 484.16 293.23 251.05 216.66 318 167 470 299 260 207 2 1 2 2 2 1 30087 + 12625 659 12164 29503;29504;29505 34299;34300;34301 34300 3 LKYPLEEFTTDNQQEEAR Unmodified 2210.0491 0.049141622 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 1 8.67 3.09 1 1 1 65.795 65.795 3 2.8935E-07 22993 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.17 88.242 99.08 53.278 112.42 165.12 83.788 87.411 93 55 111 158 83 83 2 1 2 3 2 2 44732 12626 1702 12165 29506;29507;29508 34302;34303;34304;34305 34302 4 LLAAGCGPGVLADAK Unmodified 1411.7493 0.74933497 2810 Q922R1 UPF0183 protein C16orf70 homolog yes yes 0 0 0 0 8 0 1 69.317 69.317 3 1.0182E-05 23027 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.763 53.971 0 48.358 35.033 47.129 56.411 0 0 46 37 46 56 0 0 1 1 1 1 0 3043.2 12627 2810 12166 29509 34306 34306 1 LLACGSASQGICQFLR Unmodified 1779.876 0.87600882 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 10 0 1 76.151 76.151 3 0.0006913 23178 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.946 35.216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12628 1802 12167 29510 34307 34307 1 LLACIASR Unmodified 902.50077 0.50077184 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 10.5 0.5 1 1 59.495 59.495 2 0.044988 15888 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.676 28.975 48.978 158.43 0 0 0 0 46 157 0 0 0 0 1 2 0 0 0 0 24963 12629 1714 12168 29511;29512 34308;34309 34308 2 LLACLQNVHK Unmodified 1194.6543 0.65431237 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 12 0 1 60.969 60.969 3 0.0015902 14546 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.371 34.485 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12630 1083 12169 29513 34310 34310 1 LLADPTGAFGK Unmodified 1088.5866 0.58660996 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 10.7 1.89 1 1 1 1 2 71.693 71.693 2;3 2.9996E-20 21376 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 175.73 113.73 1192.3 579.23 1399.1 185.25 1323.5 1654 1120 585 1337 196 1319 1587 5 3 6 2 5 7 457190 12631 1867 12170 29514;29515;29516;29517;29518;29519 34311;34312;34313;34314;34315;34316;34317 34314 7 LLADQAEAR Unmodified 985.51926 0.51925868 425 A2A547;P84099 Rpl19 Ribosomal protein L19;60S ribosomal protein L19 yes no 0 0 0 0 5 0 1 45.561 45.561 2 0.0014849 13821 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.54 45.866 99.309 27.124 57.756 97.351 45.502 39.442 93 28 56 93 46 37 2 1 1 2 1 1 4240.9 12632 425 12171 29520 34318;34319 34318 2 LLAEALNQVTQR Unmodified 1354.7569 0.75686319 1483 Q1MX41;Q1MX43;Q1MX40;Q1MX42;P28867 Prkcd Protein kinase C;Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes no 0 0 0 0 10 0 1 76.502 76.502 2 0.0011059 23342 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.289 52.512 29.878 0 27.98 48.61 0 0 28 0 28 46 0 0 1 0 1 1 0 0 3019.8 12633 1483 12172 29521 34320 34320 1 LLAEENQR Unmodified 971.50361 0.50360861 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 6 0 1 42.657 42.657 2 0.028183 11907 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.628 39.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12634 3266 12173 29522 34321 34321 1 LLAEILK Unmodified 798.52149 0.52149051 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 80.143 80.143 2 0.027191 25121 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.906 29.192 0 156.6 52.084 45.984 129.24 134.89 0 148 56 46 130 130 0 2 1 1 2 2 11526 12635 2235 12174 29523;29524 34322;34323 34322 2 LLAELPASVHALTGVDLSK Unmodified 1933.0884 0.088427662 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 9.5 0.5 1 1 85.969 85.969 3 5.1345E-05 27518 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.536 40.744 9.535 0 20.51 0 27.961 38.644 9 0 19 0 28 37 1 0 1 0 1 1 7148.1 12636 2059 12175 29525;29526 34324;34325 34325 2 LLAEPVPGIK Unmodified 1035.6328 0.63283187 1688 P61089;A0A1W2P7Z3 Ube2n Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 0 9.4 2.06 1 1 1 1 1 69.565 69.565 2 4.3926E-05 22398 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.04 62.487 671.25 291.64 369.73 521.67 655.38 451.63 629 305 372 504 660 436 6 3 3 4 5 5 131070 12637 1688 12176 29527;29528;29529;29530;29531 34326;34327;34328;34329;34330;34331 34329 6 LLAEQLGFDFFEASAK Unmodified 1784.8985 0.89850163 3010 Q9CZT8 Rab3b Ras-related protein Rab-3B yes yes 0 0 0 0 10 2.16 1 1 1 98.566 98.566 3 2.2078E-08 35343 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.63 90.147 0 0 54.295 47.917 38.702 0 0 0 51 47 37 0 0 0 2 2 1 0 15515 12638 3010 12177 29532;29533;29534 34332;34333;34334 34332 3 LLAFLYSGGHR Unmodified 1232.6666 0.66659162 2986 Q9CXF7 Chd1l Chromodomain-helicase-DNA-binding protein 1-like yes yes 0 0 0 0 11.5 0.5 1 1 72.212 72.212 2 0.00040691 18720 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.548 32.13 29.807 46.934 0 0 62.76 0 28 46 0 0 60 0 1 1 0 0 1 0 10513 12639 2986 12178 29535;29536 34335;34336 34336 2 LLAGALAGTTAASLTYPLDLVR Unmodified 2186.2311 0.23106915 2634 Q8R0Y8 Slc25a42 Mitochondrial coenzyme A transporter SLC25A42 yes yes 0 0 0 0 12 0 1 97.76 97.76 3 3.289E-06 27941 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.008 43.064 0 0 19.088 19.629 0 9.594 0 0 18 19 0 9 0 0 1 2 0 1 2261.5 12640 2634 12179 29537 34337;34338 34338 2 LLAGAVK Unmodified 670.43776 0.43776088 277 A0A1D5RLW0;A0A1D5RLU2;Q91WE2;A0A1D5RM67 Fam192a Protein FAM192A yes no 0 0 0 0 11 0 1 56.144 56.144 2 0.05693 14046 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.021 25.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12641 277 12180 29538 34339 34339 1 LLAGDHPIELLLR Unmodified 1458.8558 0.85584895 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 9 0 1 76.719 76.719 3 2.3036E-05 25749 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.64 81.314 0 20.216 0 39.747 36.876 0 0 19 0 37 37 0 0 1 0 1 1 0 4321.7 12642 1817 12181 29539 34340 34340 1 LLAGGHK Unmodified 694.41261 0.41260876 2251 Q6PHQ8 Naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit yes yes 0 0 0 0 9 0 1 39.339 39.339 3 0.051214 8531 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.761 0 98.424 78.958 162.55 71.194 0 0 93 83 158 74 0 0 1 1 1 1 0 0 6700.4 12643 2251 12182 29540 34341 34341 1 LLAHVRPPVSK Unmodified 1215.7452 0.74517629 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 1 9 4.64 1 1 2 48.499 48.499 3;4 1.3924E-08 14762 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.28 57.558 1436.6 995.51 1807.2 1720.7 1447 1624.9 1351 1043 1803 1689 1492 1563 6 5 8 7 6 7 276080 12644 1568 12183 29541;29542;29543;29544 34342;34343;34344;34345;34346;34347;34348;34349 34343 8 LLAITELLQQK Unmodified 1268.7704 0.77038799 368 A0A286YDU0;E9PYG6 Rasa1 yes no 0 0 0 0 6.5 5.5 1 1 92.196 92.196 3 0.0012969 32681 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.283 47.059 25.62 8.9794 14.583 30.604 0 0 24 9 14 28 0 0 2 1 1 1 0 0 3152.3 12645 368 12184 29545;29546 34350;34351;34352 34350 3 LLANMVYQYK Unmodified 1241.6478 0.64783001 1243 O55234 Psmb5 Proteasome subunit beta type-5 yes yes 0 0 0 0 4.67 5.19 2 1 76.396 76.396 2;3 5.1217E-07 20216 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.83 106.91 50.194 26.111 134.19 132.06 108.06 173.09 47 28 130 130 111 167 2 2 2 2 1 3 20645 12646 1243 12185 29547;29548;29549 34353;34354;34355;34356 34356 4 LLANSIHGLNAARPDYIASK Unmodified 2123.1487 0.14873651 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0;F6R4N2;A0A0R4J0Q2;E9QAD0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 1 10 0 1 61.596 61.596 4 0.054401 16767 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 31.067 16.606 0 86.646 99.645 123.93 68.74 86.516 0 83 102 120 74 83 0 1 1 1 1 1 7297.2 12647 677 12186 29550 34357 34357 1 LLAPGNYK Unmodified 874.49125 0.49125301 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 10.8 1.48 1 1 1 1 57.476 57.476 2 0.0035182 14539 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.78 72.736 448.31 500.65 449.23 400.63 509.18 390.51 422 506 449 389 502 371 3 4 3 3 3 2 74434 12648 1868 12187 29551;29552;29553;29554 34358;34359;34360;34361 34360 4 LLAPHIGR Unmodified 875.53412 0.53412088 265 A0A1B0GSX7;Q6PFD9 Nup98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 yes no 0 0 0 0 10 0 1 46.971 46.971 3 0.011805 10533 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.682 44.134 29.754 57.578 0 0 48.116 0 28 56 0 0 46 0 1 1 0 0 1 0 2249 12649 265 12188 29555 34362 34362 1 LLAQGLIK Unmodified 854.55894 0.55893865 2695 Q8VDC0 Lars2 Probable leucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 1 0 1 73.758 73.758 2 0.051208 25105 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.148 0 39.701 0 0 40.441 0 69.29 37 0 0 37 0 65 1 0 0 1 0 1 6503.4 12650 2695 12189 29556 34363 34363 1 LLAQYFQYR Unmodified 1200.6291 0.62914348 3062 Q9D4C9 Clvs1 Clavesin-1 yes yes 0 0 0 0 12 0 1 73.863 73.863 2 0.0034931 19263 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.308 49.284 0 0 0 109.48 106.42 135.54 0 0 0 102 111 130 0 0 0 1 1 1 16289 12651 3062 12190 29557 34364 34364 1 LLASALQIHR Unmodified 1120.6717 0.671677 1229 O55026 Entpd2 Ectonucleoside triphosphate diphosphohydrolase 2 yes yes 0 0 0 0 12 0 1 59.084 59.084 3 2.2827E-08 13755 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 142 78.509 20.387 0 0 40.441 0 39.442 19 0 0 37 0 37 1 0 0 1 0 1 11232 12652 1229 12191 29558 34365 34365 1 LLASCSADMTIK Unmodified 1308.6418 0.64175835 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 8 0 1 65.909 65.909 3 0.00053906 21348 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.395 42.921 0 38.738 37.71 0 0 20.254 0 37 37 0 0 19 0 1 1 0 0 1 5709.4 12653 1760 12192 29559 34366 34366 1 LLASFIPTTYEK Unmodified 1381.7493 0.74931819 3222 Q9JJY3 Smpd3 Sphingomyelin phosphodiesterase 3 yes yes 0 0 0 0 11 0 1 84.04 84.04 3 0.0050973 26238 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.013 25.075 0 9.576 0 30.604 0 0 0 9 0 28 0 0 0 1 0 1 0 0 2761.1 12654 3222 12193 29560 34367 34367 1 LLASHLK Unmodified 780.48577 0.48577371 1323 P08030;A0A1D5RLR6 Aprt Adenine phosphoribosyltransferase yes no 0 0 0 0 11 0 1 47.978 47.978 3 0.0046478 10696 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.71 50.03 0 125.29 142.76 221.4 154.05 0 0 120 148 213 157 0 0 1 1 1 1 0 19557 12655 1323 12194 29561 34368 34368 1 LLASINSTVR Unmodified 1072.6241 0.6240581 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 61.166 61.166 2 0.0071448 16061 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.494 28.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12656 1955 12195 29562;29563 34369;34370 34369 2 LLASLVK Unmodified 742.49528 0.49527576 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 6.5 5.5 1 1 72.112 72.112 2 0.01082 24625 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 121.29 0 118.91 113.45 116.97 147.01 181.53 0 112 116 121 144 180 0 2 2 2 2 2 0 27735 12657 2151 12196 29564;29565 34371;34372 34371 2 LLASMLAK Unmodified 845.50446 0.50446024 584 B1AT82;Q9D0M1;B1AT84;B1AT83 Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 0 1 0 1 75.886 75.886 2 0.0077098 26144 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.75 49.07 49 25.849 38.236 0 46.477 47.71 46 28 37 0 46 46 1 1 1 0 1 1 2466.7 12658 584 12197 29566 34373 34373 1 LLATVLSQK Unmodified 971.60153 0.60153174 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 7.6 5.39 2 3 75.494 75.494 2;3 1.6763E-60 19799 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 178.94 114.14 207.77 51.617 202.5 121.75 101.22 98.359 195 56 196 121 102 93 4 2 4 3 2 2 36599 12659 2226 12198 29567;29568;29569;29570;29571 34374;34375;34376;34377;34378;34379 34378 6 LLAVNNTNLQDVR Unmodified 1468.7998 0.79979063 538 Q52KF7;A2BEE9;P70175 Dlg3 Disks large homolog 3 yes no 0 0 0 0 9 0 1 62.246 62.246 2 9.368E-12 18971 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.175 61.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12660 538 12199 29572 34380 34380 1 LLAYALDYWSK Unmodified 1341.6969 0.69688869 2652 Q8R2W9;F6VV40;Q3U4S0 Pank3;Pank2 Pantothenate kinase 3 yes no 0 0 0 0 12 0 1 95.52 95.52 3 0.0067884 27409 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.927 35.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 555.88 12661 2652 12200 29573 34381 34381 1 LLCGGGAAADR Unmodified 1059.5131 0.51312744 1562 P47738;A0A0G2JEU1;A0A0G2JF60 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 6 0 1 44.513 44.513 2 0.034408 12799 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.949 16.654 0 0 0 30.604 0 39.442 0 0 0 28 0 37 0 0 0 1 0 1 4984.9 12662 1562 12201 29574 34382 34382 1 LLCGLLSDR Unmodified 1045.559 0.559015 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 0 0 0 10.8 1.48 1 1 1 1 73.092 73.092 2 1.6449E-45 22036 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 211.39 117.38 1642.5 441.31 2119.3 1559.1 2228.5 1362 1543 467 2055 1568 2244 1324 4 3 5 4 5 3 691990 12663 1510 12202 29575;29576;29577;29578 34383;34384;34385;34386;34387;34388 34385 6 LLCSITGGTSPAQWEDITGTTPLTFIK Unmodified 2906.4736 0.47356062 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5 Ank3 Ankyrin-3 yes no 0 0 0 0 10 0 1 99.718 99.718 4 0.00146 32549 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.526 24.338 0 0 0 0 19.71 4.7676 0 0 0 0 19 5 0 0 0 0 1 1 1460.4 12664 3450 12203 29579 34389 34389 1 LLCSNSAFLR Unmodified 1179.607 0.60702783 812 E0CZE0;Q8VBW6 Nae1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 0 11 0 1 63.862 63.862 2 0.0018668 17326 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.392 40.109 54.201 34.74 58.234 0 0 0 51 37 56 0 0 0 1 1 1 0 0 0 4820.1 12665 812 12204 29580 34390 34390 1 LLDAQLATGGIVDPR Unmodified 1537.8464 0.84640648 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 7 0 1 73.903 73.903 3 0.047227 25814 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.702 8.7157 9.657 0 0 0 0 20.254 9 0 0 0 0 19 1 0 0 0 0 1 3972.6 12666 3266 12205 29581 34391 34391 1 LLDASWYLPK Unmodified 1204.6492 0.64921022 2826 Q99J99;A0A2R8VHT1;A0A2R8VHE5 Mpst 3-mercaptopyruvate sulfurtransferase yes no 0 0 0 0 10 0.816 1 1 1 84.237 84.237 3 0.00090469 26718 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.677 40.202 69.121 67.355 64.987 48.62 55.345 68.483 65 65 65 47 56 65 2 2 2 1 2 2 13510 12667 2826 12206 29582;29583;29584 34392;34393;34394;34395 34393 4 LLDAVDTYIPVPTR Unmodified 1571.8559 0.85590853 2361 Q8BFR5;A0A0U1RNQ6 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 84.658 84.658 2 2.2049E-24 30865 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.26 108.9 108.91 20.216 89.257 20.767 112.77 136.47 102 19 83 19 111 130 2 1 2 1 2 2 21348 12668 2361 12207 29585;29586;29587 34396;34397;34398 34396 3 LLDDAMEADK Unmodified 1119.5118 0.51179004 2899 Q9CPV4 Glod4 Glyoxalase domain-containing protein 4 yes yes 0 0 0 0 4 0 1 65.832 65.832 3 0.046088 23509 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.918 4.504 0 0 0 30.256 18.484 0 0 0 0 28 19 0 0 0 0 1 1 0 1564.2 12669 2899 12208 29588 34399 34399 1 LLDEAIQAVK Unmodified 1098.6285 0.62847478 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 7.5 0.5 1 1 76.906 76.906 2;3 0.001088 27140 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.732 43.364 118.09 53.969 172.27 103.05 83.357 79.95 111 56 167 102 83 75 2 1 3 2 1 2 10898 12670 3174 12209 29589;29590 34400;34401;34402 34400 3 LLDEDEIR Unmodified 1001.5029 0.50293991 2375 Q8BGC0 Htatsf1 HIV Tat-specific factor 1 homolog yes yes 0 0 0 0 3 0 1 57.227 57.227 2 0.019545 19962 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.516 0.18164 0 38.421 56.667 36.367 37.031 0 0 37 56 37 37 0 0 1 1 1 1 0 4803.1 12671 2375 12210 29591 34403 34403 1 LLDEEEATDNDLR Unmodified 1531.7002 0.70019575 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 2 0.816 1 1 1 59.137 59.137 2;3 0.00015236 19056 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.558 59.581 39.347 87.499 83.27 48.707 55.674 117.8 37 84 84 47 56 112 2 3 4 2 2 3 30174 12672 3327 12211 29592;29593;29594 34404;34405;34406;34407 34404 4 LLDEEISR Unmodified 973.50803 0.50802529 3284 Q9QYS9 Qki Protein quaking yes yes 0 0 0 0 4 0 1 55.819 55.819 2 0.0097414 19017 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.442 39.642 0 48.944 0 40.441 0 29.848 0 46 0 37 0 28 0 1 0 1 0 1 5529.5 12673 3284 12212 29595 34408 34408 1 LLDELSDPEASK Unmodified 1315.6507 0.65072636 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 4.5 0.5 1 1 71.128 71.128 3 0.0052485 25805 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.013 27.637 29.814 0 38.623 28.302 0 29.848 28 0 37 28 0 28 1 0 1 1 0 1 2039.2 12674 570 12213 29596;29597 34409;34410 34409 2 LLDELTLEGVTR Unmodified 1357.7453 0.74529545 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 8.8 3.49 1 1 1 2 80.34 80.34 2;3 5.0573E-13 30909 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.79 77.618 168.85 180.65 269.22 66.365 325.54 270 159 177 260 65 323 261 4 4 5 2 5 4 48490 12675 2702 12214 29598;29599;29600;29601;29602 34411;34412;34413;34414;34415;34416 34416 6 LLDEVFFSEK Unmodified 1225.6231 0.62305505 3310 Q9R1P0;E9PW69;E9Q0X0 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 9.75 3.27 1 1 2 85.601 85.601 2;3 0.0032427 33446 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.417 33.049 29.87 68.215 105.48 38.615 65.948 77.259 28 65 103 38 65 74 1 1 3 2 2 2 18254 12676 3310 12215 29603;29604;29605;29606 34417;34418;34419;34420 34420 4 LLDFGSLSNLQVTQPTVGMNFK Unmodified 2408.241 0.24098191 1782 P63276 Rps17 40S ribosomal protein S17 yes yes 0 0 0 0 11 0.707 1 2 1 94.789 94.789 3;4 1.2835E-07 30968 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.167 40.967 35.119 83.055 19.827 89.537 0 49.036 33 79 19 83 0 46 2 2 1 3 0 1 8791.5 12677 1782 12216 29607;29608;29609;29610 34421;34422;34423;34424 34421 4 LLDGDDGPLR Unmodified 1069.5404 0.54038805 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 7.33 4.03 1 1 1 60.643 60.643 2 1.2694E-08 21322 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.82 104.14 246.23 276.39 39.844 161.68 168.93 225.44 231 276 42 153 176 216 3 3 1 2 2 2 74193 12678 3371 12217 29611;29612;29613 34425;34426;34427 34425 3 LLDGSAEFDGK Unmodified 1150.5506 0.55061839 2288 Q7TNR6 Igsf21 Immunoglobulin superfamily member 21 yes yes 0 0 0 0 5 0 1 65.754 65.754 3 0.018916 23348 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.844 24.608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12679 2288 12218 29614 34428 34428 1 LLDKSDTAYQWNLK Unmodified 1693.8675 0.86753585 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 1 10 0 1 69.626 69.626 3 0.0057356 20339 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.891 24.259 0 68.215 56.499 0 46.477 47.71 0 65 56 0 46 46 0 1 1 0 1 1 4666.3 12680 1093 12219 29615 34429 34429 1 LLDLVQQSCNYK Unmodified 1479.7392 0.73916421 3034 Q9D0T1 Nhp2l1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 0 9.5 0.5 1 1 74.847 74.847 2;3 0.00073521 22597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.162 42.503 39.58 23.931 0 24.472 35.486 0 37 25 0 23 35 0 1 1 0 1 1 0 6201.9 12681 3034 12220 29616;29617 34430;34431 34431 2 LLDLYGWAQLSDTYVTLR Unmodified 2126.1048 0.10480601 3275 Q9QYB8;A0A0N4SWF0 Add2 Beta-adducin yes no 0 0 0 0 10.7 1.7 1 1 1 99.968 99.968 3 0.00045731 40393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.493 40.963 20.292 18.848 0 36.604 0 29.848 19 19 0 34 0 28 1 1 0 2 0 1 9885.3 12682 3275 12221 29618;29619;29620 34432;34433;34434 34434 3 LLDPEDISVDHPDEK Unmodified 1720.8156 0.81555986 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 4 0.707 1 2 1 64.619 64.619 3;4 9.58E-08 23027 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.62 93.893 106.37 161.85 249.29 151.13 138.03 192.21 102 158 241 140 139 184 3 4 4 4 2 4 53411 12683 2148 12222 29621;29622;29623;29624 34435;34436;34437;34438;34439;34440;34441;34442 34441 8 LLDPEDVDVPQPDEK Unmodified 1707.8203 0.82031089 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 3.5 0.5 1 1 71.756 71.756 3 0.0010781 26246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.598 36.234 20.19 39.071 59.034 0 38.702 40.508 19 38 56 0 37 38 1 1 2 0 1 1 9983 12684 3266 12223 29625;29626 34443;34444;34445 34445 3 LLDPEDVNVDQPDEK Unmodified 1724.8105 0.81047448 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 3.33 0.471 2 1 68.194 68.194 3;4 3.1201E-36 24444 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.11 147.88 88.155 151.35 74.159 158.44 0 157.77 83 149 74 149 0 148 2 3 1 3 0 2 44723 12685 2186 12224 29627;29628;29629 34446;34447;34448 34448 3 LLDPSSPLALALSAR Unmodified 1522.8719 0.87189295 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 11 0.816 1 1 1 88.387 88.387 3 9.5849E-06 28470 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.932 49.591 0 19 0 0 19 0 0 19 0 0 19 0 0 1 0 0 1 0 8175.3 12686 2343 12225 29630;29631;29632 34449;34450;34451 34449 3 LLDQQNPDEDFS Unmodified 1419.6154 0.61540349 2166 Q64010 Crk Adapter molecule crk yes yes 0 0 0 0 2.5 0.5 1 1 70.126 70.126 2 2.8123E-05 25925 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.048 83.75 20.302 0 14.207 18.827 0 14.924 19 0 14 18 0 14 1 0 1 1 0 1 10479 12687 2166 12226 29633;29634 34452;34453 34453 2 LLDSDQELYR Unmodified 1250.6143 0.61428128 2871 Q99MK8;Q7TS64 Adrbk1 Beta-adrenergic receptor kinase 1 yes no 0 0 0 0 5 0 1 61.215 61.215 2 0.013095 21310 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.005 25.623 29.904 27.776 0 0 48.116 0 28 28 0 0 46 0 1 1 0 0 1 0 3404.7 12688 2871 12227 29635 34454 34454 1 LLDSLEPPGEPGPSTSIPENDTVDGR Unmodified 2691.2875 0.28753399 3372 Q9Z1A1;F6QJV5 Tfg yes no 0 0 0 0 3.5 0.5 1 1 76.199 76.199 3 1.9301E-05 28096 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.271 43.392 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2833.8 12689 3372 12228 29636;29637 34455;34456;34457 34456 3 LLDSSTVTHLFK Unmodified 1359.7398 0.73981614 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 0 10 0.816 1 1 1 73.304 73.304 3 3.9695E-12 22048 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.98 82.464 182.51 71.708 102.16 37.164 41.094 32.939 171 74 98 37 42 32 3 2 2 1 1 1 66930 12690 3256 12229 29638;29639;29640 34458;34459;34460 34459 3 LLDSVEQDFQLEIAK Unmodified 1746.904 0.90398093 3361 Q9Z0P5 Twf2 Twinfilin-2 yes yes 0 0 0 0 13 0 1 91.742 91.742 3 0.00069141 36514 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.261 28.823 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12691 3361 12230 29641 34461 34461 1 LLDTEDELSDIQTDSVPSEVR Unmodified 2360.1231 0.12309443 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 6 4.97 1 1 1 77.097 77.097 3 1.3031E-30 27542 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 141.84 126.34 29.814 24.256 19.983 0 9.414 5.33 28 25 19 0 9 5 2 3 1 0 1 1 21135 12692 2451 12231 29642;29643;29644 34462;34463;34464;34465 34462 4 LLDTLKK Unmodified 829.5273 0.52730417 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 10 0 1 59.276 59.276 3 0.0311 15637 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.616 24.026 329.21 205 220.72 366.87 308.65 268.35 309 217 232 353 320 260 1 1 1 1 1 1 154330 12693 1160 12232 29645 34466 34466 1 LLDTSFASSER Unmodified 1224.5986 0.59863121 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 10 3 1 1 61.621 61.621 2 0.0010809 20038 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.948 61.066 69.133 73.394 40.699 96.998 60.189 97.42 65 74 46 92 65 93 1 1 1 1 1 1 7066.7 12694 1275 12233 29646;29647 34467;34468 34467 2 LLDTVDDMLANDIAR Unmodified 1673.8294 0.82943578 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 0 0 0 0 5 0 1 92.836 92.836 3 0.0011708 34904 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.3 14.666 0 0 0 5.465 0 9.594 0 0 0 5 0 9 0 0 0 1 0 1 495.32 12695 3353 12234 29648 34469 34469 1 LLDVPILLTEQYPEGLGPTVPELGAQGIRPVSK Unmodified 3498.9338 0.93377151 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 1 13 0 1 95.763 95.763 4 0.00021049 38432 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.682 29.534 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 1907.4 12696 1840 12235 29649 34470 34470 1 LLDVVHPAAK Unmodified 1061.6233 0.62332982 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 8.5 0.5 1 1 57.331 57.331 3 0.0022613 16575 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.297 37.699 269.39 34.419 319.73 56.714 327.05 86.697 253 37 301 56 318 83 2 1 2 1 2 1 55111 12697 1822 12236 29650;29651 34471;34472 34472 2 LLDYLNHDWK Unmodified 1315.6561 0.65608651 2048 Q5H8C4;A0A286YCT3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 9 0 1 74.702 74.702 3 0.023115 24791 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.359 23.161 49.129 0 38.557 27.602 37.434 0 46 0 37 28 37 0 1 0 1 1 1 0 4554 12698 2048 12237 29652 34473 34473 1 LLDYLVIVGAR Unmodified 1230.7336 0.73360855 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 11 0.816 1 1 1 91.376 91.376 2 0.0018001 29283 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.213 40.443 9.657 0 15.148 0 59.811 29.608 9 0 14 0 60 28 1 0 1 0 3 1 16981 12699 204 12238 29653;29654;29655 34474;34475;34476 34475 3 LLDYVPIGPR Unmodified 1141.6495 0.64954457 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 10 1.87 1 1 1 1 76.069 76.069 2 1.4094E-37 25510 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 199.02 114.66 1456.7 609.5 1390 1363.7 825.5 1752.6 1368 620 1351 1322 838 1659 5 4 4 5 5 5 596520 12700 1554 12239 29656;29657;29658;29659 34477;34478;34479;34480;34481;34482 34478 6 LLEAGDFICQALNR Unmodified 1618.8137 0.81372614 1532 P38060 Hmgcl Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 0 0 0 0 9 0 1 86.65 86.65 3 0.0010257 30347 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.364 32.394 20.265 0 20.456 0 27.961 38.644 19 0 19 0 28 37 1 0 1 0 1 1 2599.6 12701 1532 12240 29660 34483 34483 1 LLEAHEEQNSEAYTEAVK Unmodified 2059.9698 0.96982867 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 5.4 3.83 2 2 1 55.409 55.409 3;4 1.2398E-19 18880 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.64 112.85 335.35 308.3 348.56 319.12 345.29 300.34 315 307 351 315 353 287 4 5 5 5 6 5 65254 12702 1478 12241 29661;29662;29663;29664;29665 34484;34485;34486;34487;34488;34489;34490 34487 7 LLEAHEEQNSEAYTEAVKEFDSISR Unmodified 2894.357 0.35701054 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 1 4 0 1 72.775 72.775 4 3.7345E-17 26570 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.837 68.033 0 58.811 46.243 0 0 0 0 56 46 0 0 0 0 1 1 0 0 0 5942.8 12703 1478 12242 29666 34491 34491 1 LLEAHEEQNVDSYTEAVK Deamidation (N) 2074.9695 0.96949432 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 1 0 0 8 5 1 1 59.64 59.64 3;4 0.00013714 21322 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.827 42.594 30.044 76.537 131.52 102.17 98.671 96.889 28 74 130 102 102 93 1 1 1 1 2 1 7912.7 12704 3106 12243 29667;29668 34492;34493 34492 1075 2 LLEAHEEQNVDSYTEAVK Unmodified 2073.9855 0.98547873 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 4 0.707 1 2 1 60.028 60.028 3;4 4.4674E-35 21043 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.83 126.13 30.044 38.766 36.002 38.295 72.738 143.85 28 37 37 37 74 138 1 1 1 1 2 3 22983 12705 3106 12243 29669;29670;29671;29672 34494;34495;34496;34497 34495 4 LLEAHEEQNVDSYTEAVKEYDSISR Unmodified 2924.3676 0.36757523 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 1 4 0 1 68.676 68.676 4 0.048807 24762 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 28.93 18.223 0 29.792 0 30.604 0 39.442 0 28 0 28 0 37 0 1 0 1 0 1 3344.6 12706 3106 12244 29673 34498 34498 1 LLEAQSHFR Unmodified 1099.5774 0.57744226 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9 2.55 1 1 1 1 45.845 45.845 3 1.657E-18 14001 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.4 130.61 387.29 182.19 37.096 352.67 114.83 460.43 362 185 37 324 120 435 4 2 1 3 2 4 86563 12707 551 12245 29674;29675;29676;29677 34499;34500;34501;34502 34502 4 LLEATELK Unmodified 915.5277 0.5276981 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.67 3.09 1 1 1 65.204 65.204 2;3 0.00039103 21740 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.27 59.243 624.27 407.66 592.11 613.33 672.06 656.67 587 432 598 605 691 634 3 3 3 3 3 3 75428 12708 551 12246 29678;29679;29680 34503;34504;34505 34504 3 LLEDSSLDTEVDPGR Unmodified 1644.7843 0.78425973 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 2.5 0.5 1 1 66.67 66.67 2;3 0.00077561 24013 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.831 36.785 20.119 7.5732 38.656 18.463 0 0 19 9 37 19 0 0 1 1 1 1 0 0 2889.4 12709 3391 12247 29681;29682 34506;34507 34506 2 LLEDVEVATEPTGSR Unmodified 1614.8101 0.81008055 2121 Q61249 Igbp1 Immunoglobulin-binding protein 1 yes yes 0 0 0 0 4 0 1 70.954 70.954 3 0.048602 25747 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.302 18.412 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12710 2121 12248 29683 34508 34508 1 LLEEHSR Unmodified 882.45593 0.45593014 2548 Q8CHT0 Aldh4a1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 33.184 33.184 3 0.010793 7837 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.213 28.787 39.29 45.025 75.929 27.818 0 39.442 37 46 74 28 0 37 1 2 2 1 0 1 4356.8 12711 2548 12249 29684;29685 34509;34510 34510 2 LLEELEEGQK Unmodified 1186.6081 0.60813326 3014;3050 Q9CZY3;B7ZBY7;E9PY39;B7ZBY6;Q9D2M8 Ube2v1;Gm20431;Ube2v2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 0 5.83 3.34 1 2 1 1 1 71.591 71.591 2;3 8.8619E-08 26100 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142.43 91.361 228.66 117.54 259.32 265.82 102.97 235.65 214 112 251 251 102 222 4 3 5 4 3 3 107950 12712 3014;3050 12250 29686;29687;29688;29689;29690;29691 34511;34512;34513;34514;34515;34516;34517 34514 7 LLEETQAELLK Unmodified 1285.7129 0.71293269 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 8 3.56 1 1 1 74.309 74.309 2;3 2.1633E-08 26888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.83 53.467 39.701 88.912 27.733 67.621 179.39 46.604 37 84 28 65 176 46 1 2 1 2 3 1 13849 12713 573 12251 29692;29693;29694 34518;34519;34520 34519 3 LLEFQLALK Unmodified 1073.6485 0.64848194 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 10 0 1 85.082 85.082 2 0.020378 27133 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.711 21.008 0 0 28.57 38.738 0 0 0 0 28 37 0 0 0 0 1 1 0 0 1930.2 12714 2092 12252 29695 34521 34521 1 LLEGEECR Unmodified 1004.4597 0.45969489 1415;662;651;2009 P19246;CON__Q7RTS7;CON__Q32MB2;CON__P48668;CON__P04259;CON__P02538;CON__P13647;CON__O95678;CON__Q8N1N4-2;CON__Q7RTT2;CON__P07744;E9Q1Z0;P07744;CON__P35908v2;CON__P35908;CON__Q6NXH9;Q6NXH9;Q3UV17;CON__Q01546 Nefh;4732456N10Rik;Krt4;Krt73;Krt76 Neurofilament heavy polypeptide;Keratin, type II cytoskeletal 4;Keratin, type II cytoskeletal 73;Keratin, type II cytoskeletal 2 oral no no 0 0 0 0 6.67 4.5 1 1 1 45.04 45.04 2 0.012347 13971 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.752 54.503 158.41 69.16 66.958 237.26 74.388 99.138 148 65 65 222 74 93 2 1 1 3 1 1 28283 + 12715 1415;651;662;2009 12253 29696;29697;29698 34522;34523;34524 34523 3 LLEGEEER Unmodified 973.47164 0.47163978 1580;182;1379 A0A0R4J0Q5;P21619;P14733;P48678 Lmnb2;Lmnb1;Lmna Lamin-B2;Lamin-B1;Prelamin-A/C;Lamin-A/C no no 0 0 0 0 2.5 0.5 1 1 45.212 45.212 2 0.011684 14476 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.439 47.992 197.32 177.27 49.525 159.99 152.28 233.37 185 176 46 149 158 223 3 2 1 2 2 3 69444 12716 182;1379;1580 12254 29699;29700 34525;34526;34527 34527 3 LLEGEENR Unmodified 958.47197 0.47197413 1304 P03995;Q6IFZ8 Gfap;Gm5414 Glial fibrillary acidic protein no no 0 0 0 0 8.5 4.5 1 1 43.237 43.237 2 0.010828 13149 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.909 54.607 79.402 0 0 118.21 233.34 113.61 74 0 0 111 232 111 1 0 0 1 2 1 64410 12717 1304 12255 29701;29702 34528;34529 34528 2 LLEGEESR Unmodified 931.46108 0.4610751 1423;1493 P20152;A0A0A6YWC8;CON__Q9DCV7;CON__Q3KNV1;CON__P08729;CON__P05787;Q9DCV7;P11679;G5E846;CON__Q9H552;A0A2R8W6R6;G3X981;CON__Q9NSB2;CON__Q6ISB0;P15331;P31001 Vim;Krt7;Krt8;Prph;Des Vimentin;Keratin, type II cytoskeletal 7;Keratin, type II cytoskeletal 8;Peripherin;Desmin no no 0 0 0 0 3.5 0.5 1 1 44.085 44.085 2 0.0045692 13825 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.39 56.799 107.94 138.34 136.13 121.77 126.08 125.39 102 139 139 121 130 121 2 2 2 2 2 2 32263 12718 1423;1493 12256 29703;29704 34530;34531 34530 2 LLEGEETR Unmodified 945.47673 0.47672516 154;1557;1329 P46660;A0A0R4J036;P08553;P08551 Ina;Nefm;Nefl Alpha-internexin;Neurofilament medium polypeptide;Neurofilament light polypeptide no no 0 0 0 0 6.25 3.96 1 1 1 1 44.903 44.903 2 0.0011922 13860 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.16 67.734 497.53 705.44 356.81 614.97 655.9 790.38 467 695 352 582 669 759 4 5 4 4 3 5 412840 12719 1557;154;1329 12257 29705;29706;29707;29708 34532;34533;34534;34535;34536;34537 34534 6 LLEGNLYGSLFSVPSSK Unmodified 1809.9513 0.95126548 1519 P35436 Grin2a Glutamate receptor ionotropic, NMDA 2A yes yes 0 0 0 0 10.5 0.5 1 1 88.106 88.106 3 1.4942E-08 28422 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.22 90.476 0 29.792 0 0 27.961 38.644 0 28 0 0 28 37 0 1 0 0 1 1 8479.4 12720 1519 12258 29709;29710 34538;34539 34538 2 LLEGSLGEPAPLPLPTPQQPPAGVPHR Unmodified 2767.5021 0.50209906 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 6.5 0.5 1 1 76.691 76.691 4 5.3816E-05 27015 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.633 24.255 29.571 65.907 134.36 73.701 156.9 114.63 28 65 131 74 157 111 1 2 3 2 3 2 7381.8 12721 1275 12259 29711;29712 34540;34541;34542 34542 3 LLEIDLK Unmodified 842.51132 0.51131975 1940 Q3TWW8;A0A0A6YXX6 Srsf6 Serine/arginine-rich splicing factor 6 yes no 0 0 0 0 7 0 1 75.258 75.258 2 0.052604 26347 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.854 4.8255 39.219 26.164 58.824 0 36.688 58.649 37 28 56 0 37 56 1 1 1 0 1 1 1488.4 12722 1940 12260 29713 34543 34543 1 LLEIVSYK Unmodified 963.56408 0.56408361 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 0 9 0 1 75.855 75.855 2 0.0023385 25363 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.61 58.083 0 98.952 0 80.882 0 0 0 93 0 74 0 0 0 1 0 1 0 0 4772.6 12723 848 12261 29714 34544 34544 1 LLELLWNK Unmodified 1027.6066 0.60661712 1212 O35864 Cops5 COP9 signalosome complex subunit 5 yes yes 0 0 0 0 11.5 0.5 1 1 93.035 93.035 2 0.014064 26730 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.095 34.241 39.701 20.216 0 0 46 78.884 37 19 0 0 46 74 1 1 0 0 1 2 12807 12724 1212 12262 29715;29716 34545;34546;34547 34547 3 LLEMLQSK Unmodified 960.5314 0.53140327 2249;1027 Q6PH08;Q3UHT7;A0A1B0GS69;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 10.5 0.5 1 1 77.007 77.007 2;3 0.0052881 23597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.127 20.961 0 88.312 0 0 76.116 0 0 83 0 0 74 0 0 1 0 0 2 0 9431.2 12725 2249;1027 12263 29717;29718 34548;34549 34548 2 LLEMNLMHAPQVADAILGNQMFTHYDR Unmodified 3127.5042 0.50416602 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.5 0.5 1 1 89.939 89.939 4 1.3067E-20 32539 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.216 71.136 9.4379 13.84 64.238 19.883 53.479 0 9 14 61 19 52 0 1 1 3 1 3 0 15097 12726 2185 12264 29719;29720 34550;34551;34552 34550 3 LLEPGSLGGIPSPAK Unmodified 1434.8082 0.80823006 845 E9PXB9;Z4YN86;Q9CQ85 Timm22 Mitochondrial import inner membrane translocase subunit Tim22 yes no 0 0 0 0 8 0 1 73.582 73.582 3 0.00053801 24941 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.287 39.754 0 48.359 34.986 48.193 0 49.036 0 46 37 46 0 46 0 1 1 1 0 1 4190.5 12727 845 12265 29721 34553 34553 1 LLEPLVTQVTTLVNTNSK Unmodified 1969.1096 0.10955703 1454 P26231 Ctnna1 Catenin alpha-1 yes yes 0 0 0 0 11 0 1 95.131 95.131 3 0.00011266 30694 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.427 7.9335 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 21465 12728 1454 12266 29722 34554 34554 1 LLEPLVTQVTTLVNTSNK Unmodified 1969.1096 0.10955703 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 9.6 4.36 1 2 1 1 95.2 95.2 3;4 3.2687E-26 27257 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.57 3.3147 18.241 5.32 0 36.069 51.595 52.496 17 5 0 33 51 50 2 1 0 2 4 3 46142 12729 799 12267 29723;29724;29725;29726;29727 34555;34556;34557;34558;34559;34560;34561 34559 7 LLEPVLLLGK Unmodified 1093.7111 0.71108219 1372 P14131 Rps16 40S ribosomal protein S16 yes yes 0 0 0 0 10.5 0.5 1 1 90.028 90.028 2;3 4.488E-05 28808 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.52 89.923 0 46 0 29.725 46.751 0 0 46 0 28 46 0 0 1 0 1 1 0 21683 12730 1372 12268 29728;29729 34562;34563 34563 2 LLEQGITGPEGHVLSHPEEVEAEAVYR Unmodified 2958.4723 0.47231507 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 4 0 1 66.227 66.227 4 5.8857E-12 23721 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.282 53.968 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 6107.2 12731 207 12269 29730 34564 34564 1 LLESEAVNENLR Unmodified 1385.7151 0.71505795 875 F8WGN6;E9Q0J5;Q9QXL2 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A yes no 0 0 0 0 5 0 1 58.924 58.924 2 0.011606 20245 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.721 25.737 0 8.7626 48.656 37.541 0 29.848 0 9 47 37 0 28 0 1 1 1 0 1 1846.3 12732 875 12270 29731 34565 34565 1 LLESQLQSQK Unmodified 1172.6401 0.6401021 728 D3YZ62;D3Z4J3;Q99104;F6TDE5;F6Z2S4;B8JK05 Myo5a Unconventional myosin-Va yes no 0 0 0 0 7.5 0.5 1 1 56.858 56.858 2 0.00011574 17773 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.22 8.9239 29.622 26.992 48.003 0 105.37 38.375 28 28 46 0 102 37 1 1 1 0 2 1 6526.7 12733 728 12271 29732;29733 34566;34567 34566 2 LLETIDQLYLEYAK Unmodified 1710.908 0.90800368 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 104.77 104.77 3 3.0449E-11 37289 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.76 91.348 41.652 31.559 48.195 25.344 86.237 41.027 39 30 46 24 84 39 3 3 3 2 3 3 14383 12734 418 12272 29734;29735;29736;29737 34568;34569;34570;34571;34572;34573 34569 6 LLEVDNR Unmodified 857.46068 0.46068117 1294 P00405 Mtco2 Cytochrome c oxidase subunit 2 yes yes 0 0 0 0 9.5 3.5 1 1 50.642 50.642 2 0.039057 16511 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.451 23.44 181.45 141.47 546.3 180.02 372.98 350.73 170 139 521 176 376 339 1 1 2 1 2 2 86888 12735 1294 12273 29738;29739 34574;34575 34575 2 LLEVEHPAAK Unmodified 1105.6132 0.61315906 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 0 0 0 0 7.75 3.11 1 1 1 1 49.848 49.848 3 0.0014834 15437 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.1 45.177 258.14 143.15 246.36 186.47 429.27 303.29 242 148 232 176 426 296 3 2 3 2 3 3 55947 12736 1356 12274 29740;29741;29742;29743 34576;34577;34578;34579 34577 4 LLEVIILQCK Unmodified 1227.7261 0.72608033 3164 Q9EPL8;Q7TMY7 Ipo7;Ipo8 Importin-7;Importin-8 yes no 0 0 0 0 10 0 1 87.758 87.758 2 0.010316 28292 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.071 36.723 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 1126.3 12737 3164 12275 29744 34580 34580 1 LLEVLSGER Unmodified 1014.571 0.5709599 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 72.046 72.046 2 3.3095E-05 23617 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.78 41.692 477.3 34.677 268.54 314.05 379.76 320.82 446 37 259 306 379 305 4 1 3 4 4 3 122370 12738 2148 12276 29745;29746;29747;29748 34581;34582;34583;34584;34585 34584 5 LLEVLSGETLPKPTK Unmodified 1623.9447 0.94472354 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 10.2 0.748 1 2 2 77.361 77.361 3;4 2.2498E-05 23975 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.13 83.811 580.89 404.54 696.98 720.9 520.79 902.12 546 417 685 704 546 858 5 5 6 6 6 6 102200 12739 2186 12277 29749;29750;29751;29752;29753 34586;34587;34588;34589;34590;34591;34592 34589 7 LLEVQGSRPGK Unmodified 1182.6721 0.67207093 1710 P62137 Ppp1ca Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 1 9 0 1 47.125 47.125 3 0.0063939 11759 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.305 30.562 178.36 0 319.37 0 0 260.1 168 0 296 0 0 244 1 0 1 0 0 1 16819 12740 1710 12278 29754 34593 34593 1 LLEVSDDPQVLAVAAHDVGEYVR Unmodified 2494.2704 0.27036779 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 7.43 3.66 2 1 1 1 2 86.631 86.631 3;4 8.5615E-45 33159 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.82 133.52 120.48 66.309 106.56 87.867 101.56 180.45 113 66 102 83 102 172 5 3 3 3 2 6 71581 12741 65 12279 29755;29756;29757;29758;29759;29760;29761 34594;34595;34596;34597;34598;34599;34600;34601 34596 8 LLEWFNDPSLR Unmodified 1388.7089 0.70885036 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 9 0 1 87.59 87.59 3 0.0054528 30811 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.569 32.712 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1373.2 12742 62 12280 29762 34602 34602 1 LLEYDTVTK Unmodified 1080.5703 0.5702912 3081 Q9D7N9 Apmap Adipocyte plasma membrane-associated protein yes yes 0 0 0 0 7 0 1 64.19 64.19 3 0.012934 21154 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.563 30.049 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12743 3081 12281 29763 34603 34603 1 LLEYTPTAR Unmodified 1062.571 0.5709599 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 0 7 0 1 57.559 57.559 2 0.0041823 18072 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.639 39.466 68.732 72.278 109.06 142.71 144.33 114.21 65 74 111 139 148 111 1 1 1 1 1 1 13252 12744 947 12282 29764 34604 34604 1 LLFAGYNDYTINVWDVLK Unmodified 2143.099 0.098992348 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 10 0 1 105.15 105.15 3 2.746E-07 33574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.14 60.578 3.146 0 12.27 15.664 0 15.99 3 0 12 15 0 15 1 0 1 1 0 1 1322.6 12745 1752 12283 29765 34605 34605 1 LLFCTGK Unmodified 837.44186 0.44185998 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 6.5 5.5 1 1 65.264 65.264 2 0.021458 15978 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.39 0 266.21 175.64 194.13 179.19 85.537 96.697 250 185 191 176 88 93 2 2 1 2 1 1 56472 12746 2074 12284 29766;29767 34606;34607 34607 2 LLFDQFMK Unmodified 1040.5365 0.53648865 2007 Q3UUI3 Them4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 0 0 0 10.5 0.5 1 1 83.849 83.849 2 0.0085649 26141 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.51 53.717 137.61 92.984 56.513 45.894 121.98 72.013 129 97 56 46 121 69 2 2 1 1 2 1 14682 12747 2007 12285 29768;29769 34608;34609 34609 2 LLFEGAGSNPGDK Unmodified 1303.6408 0.64083038 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 64.775 64.775 2;3 3.1071E-27 21491 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 175.57 105.55 314.75 219.63 479.8 128.95 162.85 99.138 296 231 472 130 158 93 4 4 4 3 1 1 122590 12748 1606 12286 29770;29771;29772;29773;29774 34610;34611;34612;34613;34614 34611 5 LLFEIDLR Unmodified 1017.5859 0.58588168 3416 yes no 0 0 0 0 10 2.16 1 1 1 80.999 80.999 2 0.003958 27940 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.52 10.211 1424.3 640.63 1793.3 764.12 1868.1 1203.3 1340 655 1731 757 1857 1161 3 2 4 3 3 2 987460 + 12749 3416 12287 29775;29776;29777 34615;34616;34617;34618 34617 4 LLFEVFDENR Unmodified 1280.6401 0.6401021 844 E9PXB7;Q8CFI0;A0A286YDR6 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 8 0 1 85.966 85.966 2 0.017262 30895 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.245 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12750 844 12288 29778 34619 34619 1 LLFGSGLPPALF Unmodified 1230.7012 0.70124579 3196 Q9EST4 Psmg2 Proteasome assembly chaperone 2 yes yes 0 0 0 0 6.25 5.26 2 1 1 110.85 110.85 2 2.3107E-11 34966 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 116.88 83.526 4.2681 26.071 23.519 26.481 12.445 23.366 4 25 23 25 12 22 2 4 5 5 2 5 7250.7 12751 3196 12289 29779;29780;29781;29782 34620;34621;34622;34623;34624;34625;34626;34627;34628;34629 34622 10 LLFNDVQTLK Unmodified 1189.6707 0.67067394 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 9.5 0.5 1 1 75.802 75.802 2;3 0.0055624 22982 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.492 4.7759 29.578 36.583 121.31 26.921 45.899 28.538 28 37 121 28 46 28 1 1 2 1 1 1 10524 12752 3266 12290 29783;29784 34630;34631 34631 2 LLFNFSK Unmodified 867.48544 0.48543935 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 6.5 5.5 1 1 77.429 77.429 2 0.0091591 27073 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.83 38.748 157.61 95.908 219.82 91.89 141.17 108.73 148 102 213 93 139 102 1 1 2 1 1 1 18287 12753 935 12291 29785;29786 34632;34633 34632 2 LLFPTNSSSR Unmodified 1120.5877 0.58767259 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 11 0 1 59.154 59.154 2 0.014877 15310 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.118 11.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12754 456 12292 29787 34634 34634 1 LLFSHDLVSGR Unmodified 1242.6721 0.67207093 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 10 0 1 61.176 61.176 3 8.144E-05 16645 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.767 70.612 49.176 36.052 0 40.441 0 39.442 46 37 0 37 0 37 1 1 0 1 0 1 10782 12755 2262 12293 29788 34635 34635 1 LLFWVDTTVR Unmodified 1248.6867 0.68665836 2320 Q80VC9;A0A140LJI9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes no 0 0 0 0 12 0 1 88.352 88.352 2 0.012128 25155 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.419 24.627 0 29.792 0 20.075 36.791 28.798 0 28 0 19 37 28 0 1 0 1 1 1 2316.8 12756 2320 12294 29789 34636 34636 1 LLFWVTEI Unmodified 1019.5692 0.56916898 2981 Q9CWU9 Nup37 Nucleoporin Nup37 yes yes 0 0 0 0 11 0 1 115.13 115.13 2 0.046981 36617 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.866 44.584 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 894.13 12757 2981 12295 29790 34637 34637 1 LLGDLGLR Unmodified 855.5178 0.51780212 19 A0A087WPR1;P20917;Q3ZB60;A0A087WRD6 Mag Myelin-associated glycoprotein yes no 0 0 0 0 11 2 1 1 71.902 71.902 2 0.019116 23701 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.77 28.138 39.471 0 38.652 72.549 93.111 85.821 37 0 37 74 93 83 1 0 1 2 1 1 41264 12758 19 12296 29791;29792 34638;34639 34638 2 LLGEGYK Unmodified 778.4225 0.42250475 964 E9QN12;E9QPE2;P05622 Pdgfrb Platelet-derived growth factor receptor beta yes no 0 0 0 0 9.25 2.28 1 1 1 1 56.008 56.008 2 0.025273 17511 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.82 24.23 5748.3 4742.1 6034.2 3686.8 5950.2 6231.6 5413 4916 6004 3800 6055 5998 4 4 3 3 4 3 813880 12759 964 12297 29793;29794;29795;29796 34640;34641;34642;34643 34640 4 LLGELLK Unmodified 784.50584 0.50584045 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 10.7 1.7 1 1 1 77.338 77.338 2 0.021458 23822 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 0 535.81 298.38 584.68 547.5 767.12 657.15 504 315 573 546 779 637 3 2 2 3 3 3 107430 12760 246 12298 29797;29798;29799 34644;34645;34646 34645 3 LLGELLLDR Unmodified 1040.623 0.62299547 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 8 0 1 83.828 83.828 2 0.018302 29806 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.568 0 69.184 43.315 57.644 0 0 0 65 46 56 0 0 0 1 1 1 0 0 0 8419.5 12761 1888 12299 29800 34647 34647 1 LLGFGSALLDNVDPNPENFVGAGIIQTK Unmodified 2898.5127 0.51272332 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 10.2 1.71 1 2 3 2 103.16 103.16 3;4;5 6.8506E-25 33236 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.319 81.588 86.423 76.22 96.022 9.6683 82.19 121.03 82 74 93 9 79 117 5 3 4 1 4 3 59305 12762 1400 12300 29801;29802;29803;29804;29805;29806;29807;29808 34648;34649;34650;34651;34652;34653;34654;34655;34656;34657;34658 34653 11 LLGGLAVR Unmodified 797.51232 0.51232281 1755 P62908;D3YV43;A0A140LI77 Rps3 40S ribosomal protein S3 yes no 0 0 0 0 10.5 0.5 1 1 62.437 62.437 2 0.0089644 16545 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.47 13.269 88.713 0 58.137 45.072 92.589 206.24 83 0 56 46 93 204 1 0 1 1 1 2 53749 12763 1755 12301 29809;29810 34659;34660 34660 2 LLGGVTIAQGGVLPNIQAVLLPK Unmodified 2270.3726 0.37258843 1468 P27661;Q64522 H2afx;Hist2h2ab Histone H2AX;Histone H2A type 2-B yes no 0 0 0 0 8.17 5.11 2 2 1 1 100.12 100.12 3;4 7.2921E-20 33864 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.76 107.57 138.53 109.67 92.885 151.35 111.28 147.13 130 111 92 145 113 141 8 7 4 6 5 7 55939 12764 1468 12302 29811;29812;29813;29814;29815;29816 34661;34662;34663;34664;34665;34666;34667;34668;34669;34670;34671 34661 11 LLGHWEEAAHDLALACK Unmodified 1932.9516 0.9516166 2856 Q99L47;F8WJK8 St13 Hsc70-interacting protein yes no 0 0 0 0 9.33 2.62 1 1 1 73.545 73.545 4 7.8153E-05 25036 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.65 51.817 88.65 105.86 37.646 77.815 91.868 87.23 83 102 37 74 92 83 2 2 1 2 2 1 20702 12765 2856 12303 29817;29818;29819 34672;34673;34674 34673 3 LLGIITK Unmodified 756.51093 0.51092582 588 B1ATV0;Q9WVD4;Q3LRV6;A0A1B0GT29;Q8K4W8;Q61418;P51791 Clcn5;Clcn4-2;Clcn3;Clcn4 Chloride channel protein;H(+)/Cl(-) exchange transporter 5;H(+)/Cl(-) exchange transporter 4;H(+)/Cl(-) exchange transporter 3 yes no 0 0 0 0 6.5 5.5 1 1 73.106 73.106 2 0.021687 24956 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.12 23.482 88.842 172.9 182.64 166.55 204.85 147.66 83 171 180 162 208 144 1 3 2 2 2 2 34478 12766 588 12304 29820;29821 34675;34676;34677 34675 3 LLGLGVTDFSR Unmodified 1176.6503 0.65027285 1149 Q6URW6;K3W4R2;A0A140LI60 Myh14 Myosin-14 yes no 0 0 0 0 10 0 1 76.927 76.927 2 2.9503E-06 23556 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.732 71.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12767 1149 12305 29822 34678 34678 1 LLGLLQK Unmodified 783.52182 0.52182486 2766 Q91XH5;G3UXX3;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 2.83 4.1 5 1 77.851 77.851 2;3 0.0066345 20251 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.229 26.719 407.69 451.17 428.83 383.94 628.56 585.43 384 455 433 378 637 564 5 6 5 3 8 6 117370 12768 2766 12306 29823;29824;29825;29826;29827;29828 34679;34680;34681;34682;34683;34684;34685;34686;34687 34687 9 LLGNMIVIVLGHHLGK Unmodified 1713.0124 0.012366368 562 A8DUK4;P02088 Hbbt1;Hbb-b1 Hemoglobin subunit beta-1 yes no 0 0 0 0 13 0 1 87.98 87.98 4 0.00015316 34698 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.285 53.73 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 6725.4 12769 562 12307 29829 34688 34688 1 LLGNTFVALSDLR Unmodified 1417.7929 0.79291434 1970 Q3UF95;Q9Z1R2;G3UYQ2;A0A1B0GX81;G3UZT6;G3UXT8 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 10.7 0.471 1 2 86.014 86.014 2;3 4.9479E-09 27194 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.858 63.845 74 29.792 0 0 33.472 0 74 28 0 0 32 0 1 1 0 0 1 0 6648.3 12770 1970 12308 29830;29831;29832 34689;34690;34691 34691 3 LLGPCMEIMK Unmodified 1190.5862 0.58615773 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 9 0 1 74.878 74.878 2 0.012535 24904 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.823 40.182 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3554.7 12771 1495 12309 29833 34692 34692 1 LLGPDAAINLADPDGALAK Unmodified 1833.9836 0.98362824 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 8 2.61 2 1 1 1 83.974 83.974 3;4 1.2193E-19 30488 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.69 103.1 142.9 277.95 172.91 283.95 200.95 231.12 134 273 171 268 203 218 3 6 3 5 3 4 46016 12772 2844 12310 29834;29835;29836;29837;29838 34693;34694;34695;34696;34697;34698 34695 6 LLGPDAAINLADPDGALAK Deamidation (N) 1834.9676 0.96764382 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 1 0 0 9 0 1 83.959 83.959 3 0.0020771 29078 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.204 33.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12773 2844 12310 29839 34699 34699 1012 1 LLGPSAAADILQLSSSLPLQSR Unmodified 2236.2427 0.24269647 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 11 0.816 1 1 1 97.862 97.862 3 1.1477E-16 32108 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 104.38 93.439 0 0 0 9 0 5 0 0 0 9 0 5 0 0 0 1 0 1 8441.8 12774 459 12311 29840;29841;29842 34700;34701;34702 34701 3 LLGPVLVK Unmodified 837.56878 0.56877505 1069 G3UYF9;Q03958 Pfdn6 Prefoldin subunit 6 yes no 0 0 0 0 9.25 4.82 1 1 1 1 72.096 72.096 2;3 0.0010516 18583 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 146.21 92.747 577.93 460.51 581.13 391.42 575.21 685.01 544 474 577 397 587 658 4 3 3 2 2 3 68248 12775 1069 12312 29843;29844;29845;29846 34703;34704;34705;34706 34705 4 LLGQFTLIGIPPAPR Unmodified 1591.945 0.94499831 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 6.75 5.76 2 1 1 90.66 90.66 3 5.0935E-23 32252 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.54 123.33 419.13 248.97 420.09 316.65 282.42 424.61 393 250 410 302 278 404 16 11 16 12 10 13 51305 12776 1533 12313 29847;29848;29849;29850 34707;34708;34709;34710;34711;34712;34713;34714;34715;34716;34717;34718;34719;34720;34721;34722;34723;34724;34725;34726;34727;34728;34729 34710 23 LLGQQVVSPVK Unmodified 1166.7023 0.70230842 2659 Q8R3F5 Mcat Malonyl-CoA-acyl carrier protein transacylase, mitochondrial yes yes 0 0 0 0 10 0 1 63.908 63.908 3 0.030016 17686 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.689 11.705 0 0 68.759 35.272 56.956 0 0 0 65 37 56 0 0 0 1 1 1 0 1813.1 12777 2659 12314 29851 34730 34730 1 LLGVFEQNQDR Unmodified 1317.6677 0.66771383 1337 P0C028;P0C027 Nudt11;Nudt10 Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha yes no 0 0 0 0 8 0 1 69.142 69.142 2 0.038942 22952 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.436 24.834 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 3613.7 12778 1337 12315 29852 34731 34731 1 LLGYVATLK Unmodified 976.59572 0.59571809 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 8.33 5.19 1 2 77.601 77.601 2;3 0.0011209 27142 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.81 72.166 147.93 33.76 175.9 76.117 75.313 138.58 139 37 167 74 74 130 2 1 2 2 1 2 46792 12779 2566 12316 29853;29854;29855 34732;34733;34734 34732 3 LLHAVLSPR Unmodified 1004.6131 0.61309948 2333 Q80XD3;Q45FE2 Rgs7 yes no 0 0 0 0 12 0 1 52.703 52.703 3 0.0044117 11335 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.823 42.519 30.044 0 0 60.532 35.921 0 28 0 0 56 37 0 1 0 0 1 1 0 20616 12780 2333 12317 29856 34735 34735 1 LLHDGIQPVAAIDSNFANFTYTPR Unmodified 2659.3395 0.3394504 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 7.5 0.5 1 1 81.604 81.604 3 1.1104E-05 28706 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.182 34.31 20.209 0 29.852 7.6907 19.521 0 19 0 28 9 19 0 1 0 1 1 1 0 4312.5 12781 2054 12318 29857;29858 34736;34737 34737 2 LLHDLVQPPTITQQSPK Unmodified 1914.0575 0.057461885 331 A0A1W2P7Y9;A0A1W2P814 yes no 0 0 0 0 9 0 1 68.066 68.066 4 0.0038629 21670 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.338 13.01 0 0 0 0 45.451 77.587 0 0 0 0 46 74 0 0 0 0 1 1 5311.7 12782 331 12319 29859 34738 34738 1 LLHEQGK Unmodified 823.4552 0.45520186 2223 Q6P5U7 Nwd2 NACHT and WD repeat domain-containing protein 2 yes yes 0 0 0 0 7 0 1 38.607 38.607 3 0.019414 9150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.672 28.578 0 48.944 0 0 48.116 0 0 46 0 0 46 0 0 1 0 0 1 0 2049.5 12783 2223 12320 29860 34739 34739 1 LLHEVQELTTEVEK Unmodified 1666.8778 0.87776618 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 7.5 3.2 1 2 1 77.937 77.937 3;4 4.5146E-05 29767 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.619 59.746 119.58 140.47 120.54 154.58 0 69.29 112 139 120 148 0 65 3 3 2 3 0 2 22274 12784 2844 12321 29861;29862;29863;29864 34740;34741;34742;34743 34740 4 LLHGVMEQLGIAR Unmodified 1435.797 0.79695386 1363 P12961 Scg5 Neuroendocrine protein 7B2;N-terminal peptide;C-terminal peptide yes yes 0 0 0 0 11 0 1 77.453 77.453 3 0.0089733 23434 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.378 23.002 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 3615.7 12785 1363 12322 29865 34744 34744 1 LLHPIIPEQSTFK Unmodified 1521.8555 0.8555146 2983 Q9CX34 Sugt1 Suppressor of G2 allele of SKP1 homolog yes yes 0 0 0 0 9 0 1 65.749 65.749 3 0.0002808 20562 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.261 56.701 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 16511 12786 2983 12323 29866 34745 34745 1 LLHPPSHWPLIK Unmodified 1436.8292 0.82924027 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 12 0 1 63.463 63.463 4 2.8961E-05 15415 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.05 58.822 142.74 95.333 94.435 50.278 0 118.33 134 97 93 46 0 111 2 1 1 1 0 1 13065 12787 1878 12324 29867 34746;34747 34746 2 LLHSENYVTK Unmodified 1202.6295 0.62953741 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 7 0 1 49.489 49.489 3 0.00053485 14250 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.658 61.432 48.535 74.203 75.371 0 0 78.884 46 74 74 0 0 74 1 1 1 0 0 1 5350.9 12788 1888 12325 29868 34748 34748 1 LLIAAQK Unmodified 755.49052 0.49052473 2367 Q8BFZ9;A0A1B0GSD8 Erlin2 Erlin-2 no no 0 0 0 0 8 4.97 1 1 1 59.288 59.288 2 0.011567 15136 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.7 119.7 196.82 151.55 328.26 80.134 285.36 106.37 185 148 316 84 278 102 2 3 4 3 3 2 58246 12789 2367 12326 29869;29870;29871 34749;34750;34751;34752 34750 4 LLIDEAIQK Unmodified 1041.607 0.60701105 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 7 0 1 72.269 72.269 3 0.016166 24883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.066 27.995 29.856 37.355 0 0 37.714 28.772 28 37 0 0 37 28 1 1 0 0 1 1 3883.9 12790 1460 12327 29872 34753 34753 1 LLIEDLEAR Unmodified 1070.5972 0.59717465 3188 Q9ERS2 Ndufa13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 0 0 0 0 5.5 0.5 1 1 72.473 72.473 2 0.0054085 26552 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.623 53.053 118.16 145.57 235.23 145.05 143.2 144.09 111 148 232 148 148 139 1 2 2 2 2 2 19858 12791 3188 12328 29873;29874 34754;34755 34754 2 LLIEMEQR Unmodified 1030.5481 0.54811597 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 64.397 64.397 2;3 1.6295E-08 21317 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 170.66 116.51 750.63 522.1 945.26 643.47 978.07 751.71 706 549 925 646 988 726 5 4 5 3 6 3 245220 12792 1883 12329 29875;29876;29877;29878;29879 34756;34757;34758;34759;34760;34761;34762 34757 7 LLIEPTAGVALAAVLSQHFQTVSPEVK Unmodified 2817.564 0.56403061 3297 Q9QZX7 Srr Serine racemase yes yes 0 0 0 0 11 0.816 1 1 1 97.206 97.206 4 1.9259E-12 31815 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.152 56.955 24.461 13.888 24.838 5 43.448 14.102 23 14 23 5 42 14 2 1 1 1 2 1 21413 12793 3297 12330 29880;29881;29882 34763;34764;34765;34766 34763 4 LLIHQSLAGGIIGVK Unmodified 1517.9293 0.92934824 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;H3BJS9 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 5.4 5.39 3 2 73.025 73.025 3;4 4.3551E-30 24100 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.98 132.75 247.56 204.87 237.05 365.9 199.74 261.37 232 204 232 344 205 250 3 4 3 5 4 4 58961 12794 613 12331 29883;29884;29885;29886;29887 34767;34768;34769;34770;34771;34772;34773 34767 7 LLIIGTTSR Unmodified 972.59678 0.59678072 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 6.5 5.53 3 1 1 1 65.072 65.072 2 3.3041E-25 21927 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 190.52 113.67 1818.3 1399.1 1638.4 1413.8 1640.8 1961.5 1710 1442 1647 1404 1687 1884 6 6 4 5 5 6 996420 12795 1554 12332 29888;29889;29890;29891;29892;29893 34774;34775;34776;34777;34778;34779;34780;34781 34775 8 LLILADMADVMR Unmodified 1359.7254 0.7254284 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 10.5 0.5 1 1 96.114 96.114 2 0.0010583 31491 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.985 52.521 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2562.4 12796 799 12333 29894;29895 34782;34783 34782 2 LLILADMADVYK Unmodified 1363.7421 0.74212433 1454 P26231 Ctnna1 Catenin alpha-1 yes yes 0 0 0 0 10 0 1 93.775 93.775 3 0.0044184 30589 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.569 37.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12797 1454 12334 29896 34784 34784 1 LLILGGANVNYR Unmodified 1301.7456 0.74557022 945 E9QAF9;Q0VGY8 Tanc1 Protein TANC1 yes no 0 0 0 0 1 0 1 72.412 72.412 3 0.041949 24583 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.154 28.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12798 945 12335 29897 34785 34785 1 LLIQGDSSGR Unmodified 1044.5564 0.55637247 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 7 0 1 51.056 51.056 2 0.001088 15017 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.732 51.954 99.377 81.611 0 69.153 100.58 85.608 93 83 0 65 102 83 1 1 0 1 1 1 3858.2 12799 2790 12336 29898 34786 34786 1 LLIQLADSFVEK Unmodified 1374.7759 0.7758673 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560 Kalrn Kalirin yes no 0 0 0 0 10 1 1 1 99.337 99.337 3 0.00013489 32734 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.362 52.555 39.701 0 0 0 0 29.848 37 0 0 0 0 28 1 0 0 0 0 1 1713.5 12800 545 12337 29899;29900 34787;34788 34788 2 LLIQLSAGK Unmodified 941.59097 0.59096706 315 A0A1W2P6E6;Q9D289;A0A1W2P7S5 Trappc6b Trafficking protein particle complex subunit 6B yes no 0 0 0 0 1 0 1 72.419 72.419 2 0.0065432 24599 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.906 25.498 0 29.492 17.95 18.827 46.271 28.528 0 28 19 19 46 28 0 1 1 1 1 1 2316.5 12801 315 12338 29901 34789 34789 1 LLISHLSGIR Unmodified 1107.6764 0.67642802 3161 Q9EP89;A0A1L1SVF9 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial yes no 0 0 0 0 1 0 1 59.839 59.839 3 0.0004156 19597 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.298 51.354 30.044 0 20.558 30.604 28.62 49.285 28 0 19 28 28 47 1 0 1 1 1 2 7672.8 12802 3161 12339 29902 34790;34791 34791 2 LLISLSQGNR Unmodified 1099.635 0.63495714 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 1 0 1 65.785 65.785 2 0.009334 22044 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.507 19.004 39.405 26.68 27.205 28.983 0 0 37 28 28 28 0 0 1 1 1 1 0 0 4382.3 12803 1848 12340 29903 34792 34792 1 LLIVSNPVDILTYVAWK Unmodified 1943.1132 0.11318585 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 8.67 5.44 2 2 2 111.29 111.29 3;4 3.9486E-25 44438 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.81 121.69 23.412 44.877 58.241 32.584 34.309 102.34 22 44 56 32 34 97 2 6 4 3 3 7 44227 12804 1315 12341 29904;29905;29906;29907;29908;29909 34793;34794;34795;34796;34797;34798;34799;34800;34801;34802 34801 10 LLIYSFAGEYVPR Unmodified 1526.8133 0.81331543 2224 Q6P6I8;E0CYM8;A0A0R4J1Z7;E9QPT7;A2ANC1 Sirpa yes no 0 0 0 0 6.4 5.43 5 2 2 1 86.773 86.773 2;3 3.9392E-34 24034 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 188.61 135.14 179.51 135.98 188.21 228.95 183.56 209.28 168 130 185 219 183 200 8 8 9 10 7 7 318490 12805 2224 12342 29910;29911;29912;29913;29914;29915;29916;29917;29918;29919 34803;34804;34805;34806;34807;34808;34809;34810;34811;34812;34813;34814;34815;34816;34817;34818;34819;34820;34821;34822 34817 20 LLKHPNIVR Unmodified 1088.6818 0.68184775 1355;2818;103 P11798;F8WIS9;F6WHR9;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;E9QAJ4;D6RDQ8;Q923T9;A0A2I3BQP6 Camk2a;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 1 11.5 0.5 1 1 42.578 42.578 4 0.0050969 7657 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.993 54.217 377.42 370.4 898.97 166.72 255.68 443.62 357 382 860 167 259 423 1 1 2 1 1 1 100260 12806 1355;103;2818 12343 29920;29921 34823;34824 34824 2 LLKHSNIVR Unmodified 1078.6611 0.66111231 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 1 12 0 1 40.795 40.795 4 0.0016196 6815 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.948 59.976 79.402 0 0 0 0 99.138 74 0 0 0 0 93 1 0 0 0 0 1 5967 12807 1475 12344 29922 34825 34825 1 LLKPAVVGIK Unmodified 1036.7009 0.70085186 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 1 6.5 5.5 1 1 63.968 63.968 3 0.00036541 15423 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.573 66.615 1123.5 946.31 1172 1095.4 1100.5 1243.5 1058 979 1186 1085 1141 1196 2 2 2 2 2 2 101750 12808 882 12345 29923;29924 34826;34827 34827 2 LLLADAYSGR Unmodified 1077.5819 0.58185893 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 9.5 0.5 1 1 65.213 65.213 2 0.002483 18224 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.716 50.935 278.14 255.07 105.03 0 210.59 241.3 261 259 102 0 206 232 2 2 1 0 1 2 30650 12809 2438 12346 29925;29926 34828;34829 34829 2 LLLAGYDDFNCNIWDAMK Unmodified 2157.9863 0.98634713 1751 P62880;E9QKR0;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 0 9.88 1.45 1 3 2 1 1 98.012 98.012 3;4 6.1426E-08 31977 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.45 91 94.526 67.216 0 78.178 89.361 81.407 90 66 0 75 89 78 4 3 0 3 5 3 67704 12810 1751 12347 29927;29928;29929;29930;29931;29932;29933;29934 34830;34831;34832;34833;34834;34835;34836;34837;34838;34839;34840 34836 11 LLLAGYDDFNCNIWDAMK Oxidation (M);Deamidation (N) 2174.9653 0.96527734 1751 P62880;E9QKR0;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 1 1 0 9 0 1 96.45 96.45 3 0.0066773 34552 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.493 29.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12811 1751 12347 29935 34841 34841 687 134 1 LLLAGYDDFNCNVWDALK Deamidation (N) 2126.9983 0.99829203 1750 P62874 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 0 1 0 0 8.25 0.829 1 1 2 101.14 101.14 3;4 4.218E-13 36011 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.66 94.839 0 31.528 32.763 53.363 22.713 20.254 0 30 34 51 23 19 0 2 3 4 1 2 7535.1 12812 1750 12348 29936;29937;29938;29939 34842;34843;34844;34845 34844 683;684 4 LLLAGYDDFNCNVWDALK Unmodified 2126.0143 0.014276441 1750 P62874 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes yes 0 0 0 0 10.7 1.75 1 1 1 2 2 98.726 98.726 3;4 1.094E-19 39475 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 132.84 109.96 366.21 416.79 238.12 470.26 348.87 243.21 343 421 241 454 352 232 5 7 3 8 4 3 213860 12813 1750 12348 29940;29941;29942;29943;29944;29945;29946 34846;34847;34848;34849;34850;34851;34852;34853;34854;34855;34856;34857 34855 12 LLLAGYDDFNCSVWDALK Unmodified 2099.0034 0.0033774035 1485 P29387 Gnb4 Guanine nucleotide-binding protein subunit beta-4 yes yes 0 0 0 0 10 0 1 99.487 99.487 3 1.5913E-11 32499 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.493 74.859 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12814 1485 12349 29947 34858 34858 1 LLLAIVGQ Unmodified 825.53239 0.53238955 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 8.67 5.44 1 1 1 96.453 96.453 2 0.0012301 33478 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.79 83.29 41.446 14.642 93.739 75.056 36.542 82.284 39 15 90 74 38 78 4 2 4 3 3 3 69199 12815 372 12350 29948;29949;29950 34859;34860;34861;34862;34863;34864;34865;34866;34867 34860 9 LLLASFK Unmodified 790.49528 0.49527576 1286 O88983;Q9D0J1 Stx8 Syntaxin-8 yes no 0 0 0 0 1 0 1 75.79 75.79 2 0.034977 26094 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 82.305 5.5001 24.537 28.137 0 0 37.714 28.772 23 28 0 0 37 28 1 1 0 0 1 1 2954.9 12816 1286 12351 29951 34868 34868 1 LLLATDPGGSPAQR Unmodified 1394.7518 0.75177781 2603 Q8K341;F6RPX5 Atat1 Alpha-tubulin N-acetyltransferase 1 yes no 0 0 0 0 9 0 1 59.895 59.895 2 0.0057378 17846 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.426 29.616 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 3949.2 12817 2603 12352 29952 34869 34869 1 LLLATMEALNGGK Deamidation (N) 1330.7166 0.71663786 1447 P24549;A0A286YDG6;A0A286YCZ0 Aldh1a1 Retinal dehydrogenase 1 yes no 0 1 0 0 10 0 1 87.466 87.466 3 0.0003485 28162 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.78 38.058 34.336 0 0 0 0 20.254 32 0 0 0 0 19 1 0 0 0 0 1 2873.5 12818 1447 12353 29953 34870 34870 533 1 LLLDGAPLIAIHK Unmodified 1372.8442 0.84422163 1973 Q3UGR5 Hdhd2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 0 0 10.5 0.5 1 1 78.611 78.611 3 7.3891E-14 24472 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.28 96.478 260.48 217.69 504.67 250.05 289.65 277.42 244 209 490 246 297 268 1 1 2 1 1 1 113420 12819 1973 12354 29954;29955 34871;34872 34871 2 LLLDSGINAQVR Unmodified 1297.7354 0.73539946 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 9 0 1 66.803 66.803 2 0.0033625 21142 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.408 31.537 29.882 32.033 0 40.441 0 44.772 28 32 0 37 0 42 1 1 0 1 0 1 4972.1 12820 2226 12355 29956 34873 34873 1 LLLDTFEYQGLVK Unmodified 1537.8392 0.83919583 2987 Q9CXS4;F6SS03 Cenpv Centromere protein V yes no 0 0 0 0 9.5 0.5 1 1 89.766 89.766 2;3 9.4607E-05 29091 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.593 60.515 0 19.729 49.67 0 19.874 50.102 0 19 47 0 19 47 0 1 2 0 1 1 3769 12821 2987 12356 29957;29958 34874;34875 34875 2 LLLEGISSTHVNHLR Unmodified 1687.937 0.93695282 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 5.5 4.5 1 1 56.583 56.583 4 1.0255E-05 14315 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.401 61.628 78.213 109.86 177.72 128.56 156.3 58.698 74 111 176 130 157 56 1 2 2 2 2 1 15626 12822 533 12357 29959;29960 34876;34877 34877 2 LLLEHLECLVSR Unmodified 1480.8072 0.8071842 1669;639;17 P60469;F7CYX4;B8QI34;Q8BSS9;B2RXW8;B2RXQ2;B8QI36;A0A087WPM2 Ppfia3;Ppfia2;Ppfia1;Ppfia4 Liprin-alpha-3;Liprin-alpha-2 no no 0 0 0 0 10 0.816 1 1 1 79.744 79.744 3 1.679E-06 24938 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.3 41.407 0 29.152 88.057 100.28 92.672 69.29 0 28 83 93 93 65 0 1 2 1 2 1 34026 12823 1669;639;17 12358 29961;29962;29963 34878;34879;34880 34879 3 LLLEQGK Unmodified 799.48035 0.48035398 795 F6ZFG8;D6RGM2;Q6P6M7 Sepsecs O-phosphoseryl-tRNA(Sec) selenium transferase yes no 0 0 0 0 8.5 0.5 1 1 57.448 57.448 3 0.0036482 17403 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.113 23.271 0 38.264 66.025 45.103 65.918 0 0 37 65 46 65 0 0 1 1 1 1 0 6102.9 12824 795 12359 29964;29965 34881;34882 34881 2 LLLGAGAVAYGVR Unmodified 1258.7398 0.73975656 1179 O35129 Phb2 Prohibitin-2 yes yes 0 0 0 0 6.75 5.76 2 1 1 72.821 72.821 2;3 5.0527E-73 24813 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 220.51 147.97 257.21 87.038 143.71 206.86 309.68 236.43 243 84 140 196 312 228 6 3 4 5 6 5 69419 12825 1179 12360 29966;29967;29968;29969 34883;34884;34885;34886;34887;34888;34889;34890 34884 8 LLLGLHSELFR Unmodified 1296.7554 0.75540662 3114 Q9DB72 Btbd17 BTB/POZ domain-containing protein 17 yes yes 0 0 0 0 12 0 1 74.13 74.13 3 0.00061551 19398 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.536 25.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12826 3114 12361 29970 34891 34891 1 LLLHCEGR Unmodified 996.51748 0.51748454 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 0 7 0 1 41.787 41.787 3 0.041152 10670 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.997 22.925 78.844 32.95 65.891 46.351 0 69.29 74 37 65 46 0 65 1 1 1 1 0 1 4427.2 12827 1152 12362 29971 34892 34892 1 LLLHFQSPR Unmodified 1109.6346 0.63456321 2029 Q4V9Z5;D3YY14 Sez6l2 Seizure 6-like protein 2 yes no 0 0 0 0 6.5 5.5 1 1 57.206 57.206 3 9.2333E-09 12993 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 162.97 80.544 69.318 28.427 47.594 73.941 43.898 64.839 65 28 46 71 46 62 2 1 1 2 1 1 29669 12828 2029 12363 29972;29973 34893;34894 34894 2 LLLHYGR Unmodified 870.50757 0.50757178 2087 Q60790 Rasa3 Ras GTPase-activating protein 3 yes yes 0 0 0 0 11 0 1 48.505 48.505 3 0.027214 10987 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.609 6.9727 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 5746.6 12829 2087 12364 29974 34895 34895 1 LLLIATEK Unmodified 899.56917 0.56916898 2596 Q8K298 Anln Actin-binding protein anillin yes yes 0 0 0 0 11 0 1 73.334 73.334 2 0.0031167 21559 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 124.83 55.445 177.92 73.803 150.24 102.53 0 138.58 167 83 148 102 0 130 1 1 1 1 0 1 9593.6 12830 2596 12365 29975 34896 34896 1 LLLIGDSGVGK Unmodified 1070.6336 0.63356015 1742;2065;3040;1684;1685;1947 P61028;P61027;P62821;Q3TYH2;Q8K386;Q5SW88;Q5SW87;Q5SW86;Q9D1G1 Rab8b;Rab10;Rab1A;Rab15;Rab1;Rab1b Ras-related protein Rab-8B;Ras-related protein Rab-10;Ras-related protein Rab-1A;Ras-related protein Rab-15;Ras-related protein Rab-1B no no 0 0 0 0 9.6 3.1 1 2 3 2 1 1 73.713 73.713 2;3 6.9118E-26 22487 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 183.47 0 551.17 233.59 364.49 396.33 698.01 563.41 516 242 358 386 690 543 7 4 5 6 7 7 436550 12831 1685;1684;1742;1947;2065;3040 12366 29976;29977;29978;29979;29980;29981;29982;29983;29984;29985 34897;34898;34899;34900;34901;34902;34903;34904;34905;34906;34907;34908 34903 12 LLLIGNSSVGK Unmodified 1099.6601 0.66010926 1513 P35276;D3YWL1;D3YW33 Rab3d Ras-related protein Rab-3D yes no 0 0 0 0 9 4.94 3 2 4 2 68.938 68.938 2;3 1.8874E-42 17506 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 200.6 0 1192.2 996.8 1080.1 696.74 1099.4 1855.4 1118 1008 1058 692 1119 1770 10 11 12 8 8 13 842350 12832 1513 12367 29986;29987;29988;29989;29990;29991;29992;29993;29994;29995;29996 34909;34910;34911;34912;34913;34914;34915;34916;34917;34918;34919;34920;34921;34922;34923;34924;34925 34920 17 LLLINNAATLGDVSK Unmodified 1540.8825 0.88245763 2766 Q91XH5;G3UXX3;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 11.5 1.26 2 1 1 2 79.789 79.789 2;3 1.5823E-16 30702 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.17 83.845 236.33 382.58 346.99 233.1 426.72 481.38 222 380 343 222 434 463 3 5 4 3 5 5 136470 12833 2766 12368 29997;29998;29999;30000;30001;30002 34926;34927;34928;34929;34930;34931;34932 34932 7 LLLLAGVDR Unmodified 968.60187 0.6018661 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 0 9.25 4.82 1 1 1 1 76.4 76.4 2 0.0058306 22945 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.241 23.459 207.54 91.794 278.02 125.75 288.49 212.17 195 93 268 129 287 204 4 2 4 2 4 4 105880 12834 2465 12369 30003;30004;30005;30006 34933;34934;34935;34936;34937;34938 34935 6 LLLLAGVDRLDK Unmodified 1324.8078 0.80783613 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 1 12 0 1 76.724 76.724 3 0.00070287 20542 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.153 40.603 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 3084.5 12835 2465 12370 30007 34939 34939 1 LLLLDYAANR Unmodified 1160.6554 0.65535823 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 10.5 0.5 1 1 77.294 77.294 2 0.00056209 23226 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.741 52.827 59.671 96.372 224.38 0 77.404 0 56 93 213 0 74 0 1 1 2 0 1 0 16613 12836 1802 12371 30008;30009 34940;34941 34941 2 LLLLGAGESGK Unmodified 1056.6179 0.61791009 1411;1330;622;1772;3136;2540 B2RSH2;A2AE32;P20612;Q3V3I2;P50149;A2AE31;P08752;P18872;Z4YKV1;P63094;Q6R0H7;A2A610;Q8CGK7;Q66L47;Q9DC51 Gnai1;Gnat2;Gnat1;Gnat3;Gnai2;Gnao1;Gnas;Gnal;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas;Guanine nucleotide-binding protein G(olf) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 8.91 3.92 2 2 3 1 2 1 71.699 71.699 2;3 7.7332E-17 18527 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 169.65 0 1728.7 3621.4 2568.6 4008.4 4429.9 4628 1628 3533 2568 3847 4542 4460 10 12 11 13 9 10 2088700 12837 622;1330;1411;1772;2540;3136 12372 30010;30011;30012;30013;30014;30015;30016;30017;30018;30019;30020 34942;34943;34944;34945;34946;34947;34948;34949;34950;34951;34952;34953;34954;34955;34956 34955 15 LLLLGTGESGK Unmodified 1086.6285 0.62847478 1428;1427;1492 P21279;P30677;P21278 Gnaq;Gna14;Gna11 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein subunit alpha-11 no no 0 0 0 0 11.3 1.25 1 1 1 71.419 71.419 2;3 3.3475E-06 21204 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.43 80.052 69.745 348.99 0 89.384 542.53 591.07 65 328 0 83 542 569 1 1 0 1 2 2 100260 12838 1428;1492;1427 12373 30021;30022;30023 34957;34958;34959 34957 3 LLLLGTSNSGK Unmodified 1101.6394 0.63937381 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 4.67 5.19 2 1 69.425 69.425 2;3 2.3505E-53 17439 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 209.73 118.69 231.41 81.953 170.26 206.53 137.06 67.781 217 85 166 199 137 65 4 2 3 3 3 2 94322 12839 1255 12374 30024;30025;30026 34960;34961;34962;34963 34963 4 LLLLGTSNSGK Deamidation (N) 1102.6234 0.6233894 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 1 0 0 10 0 1 74.454 74.454 3 0.042892 22505 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.894 20.64 34.05 17.362 33.411 0 0 29.848 32 19 32 0 0 28 1 1 1 0 0 1 6636.4 12840 1255 12374 30027 34964 34964 344 1 LLLLNDK Unmodified 827.51165 0.5116541 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 10.5 0.5 1 1 70.169 70.169 2 0.026934 20634 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.123 17.548 119.1 0 0 0 0 118.33 111 0 0 0 0 111 1 0 0 0 0 1 5731 12841 1481 12375 30028;30029 34965;34966 34965 2 LLLLNDKR Unmodified 983.61277 0.61276513 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 1 1 0 1 58.896 58.896 3 0.021052 19013 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.169 29.978 39.414 56.926 0 60.005 63.942 37.617 37 56 0 56 65 37 1 1 0 1 1 1 8222.2 12842 1481 12376 30030 34967 34967 1 LLLMPLK Unmodified 826.53503 0.53503208 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 1 0 1 81.245 81.245 2 0.049827 28357 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.592 24.904 108.37 69.397 121.51 81.186 121.79 0 102 74 120 83 120 0 1 1 1 1 1 0 7713.9 12843 935 12377 30031 34968 34968 1 LLLNLELQK Unmodified 1082.6699 0.66994566 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 10.5 0.5 1 1 80.26 80.26 2 2.3221E-05 24659 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 146.23 93.446 129.65 0 29.945 0 273.23 95.65 121 0 28 0 268 93 2 0 1 0 4 2 47089 12844 2186 12378 30032;30033 34969;34970;34971;34972 34971 4 LLLNNDNLLR Deamidation (N) 1197.6717 0.67173657 1564;1563 P47753;Q5RKN9;A0A0G2JE27;P47754;D6RCW7;A0A0N4SVM0 Capza1;Capza2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 1 0 0 9.33 2.62 1 1 1 75.686 75.686 2 0.00068434 25886 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.78 47.558 0 76.874 111.37 92.453 77.888 136.36 0 74 111 92 83 130 0 2 2 2 2 2 14445 12845 1563;1564 12379 30034;30035;30036 34973;34974;34975 34974 592 3 LLLNNDNLLR Unmodified 1196.6877 0.68772099 1564;1563 P47753;Q5RKN9;A0A0G2JE27;P47754;D6RCW7;A0A0N4SVM0 Capza1;Capza2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 70.411 70.411 2;3 2.9458E-11 22824 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.15 98.944 389 346.63 390.72 419.52 174.45 464.85 365 343 390 403 180 440 5 4 6 5 3 4 200720 12846 1563;1564 12379 30037;30038;30039;30040;30041;30042 34976;34977;34978;34979;34980;34981;34982 34977 7 LLLPEAPPK Unmodified 976.59572 0.59571809 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 9.25 0.829 1 1 2 67.632 67.632 2;3 0.00091797 22243 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.011 69.235 206.57 89.618 191.66 95.619 257.18 96.315 194 93 185 93 252 92 3 2 2 2 2 2 25600 12847 369;3345 12380 30043;30044;30045;30046 34983;34984;34985;34986 34983 4 LLLPEAPPKK Unmodified 1104.6907 0.6906811 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 10 0 2 60.238 60.238 3;4 0.0011009 16122 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.985 44.049 474.81 269.65 221.58 358.88 571.34 274.83 445 287 223 343 571 270 3 3 2 2 3 2 38093 12848 369;3345 12381 30047;30048 34987;34988;34989 34989 3 LLLPEDPLISGLLNSQALK Unmodified 2033.1772 0.17724267 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9.8 0.748 2 2 1 101.98 101.98 3;4 3.1381E-27 33043 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 140.8 120.69 33.205 78.15 44.709 12 73.245 139.69 31 74 43 12 73 133 2 3 2 1 3 5 27892 12849 1412 12382 30049;30050;30051;30052;30053 34990;34991;34992;34993;34994;34995 34992 6 LLLPGELAK Unmodified 952.59572 0.59571809 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 0 10.2 1.72 1 1 1 1 1 73.051 73.051 2;3 2.9909E-05 22076 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.01 54.068 2611.4 2313.2 3265.9 4297.4 3845.5 4719.2 2453 2350 3215 4176 3932 4530 6 6 4 8 5 7 1988200 12850 1349;1350;2541 12383 30054;30055;30056;30057;30058 34996;34997;34998;34999;35000;35001;35002;35003 35000 8 LLLPGWCHLTVEDGPR Unmodified 1861.9509 0.95088832 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10.3 1.25 1 1 1 74.122 74.122 3 3.6064E-38 22377 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 156.6 140.24 139.04 0 75.955 139.05 153.47 157.65 130 0 74 134 158 152 2 0 1 2 2 2 70059 12851 3355 12384 30059;30060;30061 35004;35005;35006 35005 3 LLLPPAQMGSLSAK Unmodified 1424.8061 0.80612157 1803 P70232 Chl1 Neural cell adhesion molecule L1-like protein;Processed neural cell adhesion molecule L1-like protein yes yes 0 0 0 0 11 0 1 75.932 75.932 3 0.0055216 22723 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.621 25.749 59.812 0 46.429 68.278 0 0 56 0 46 65 0 0 1 0 1 1 0 0 6673.9 12852 1803 12385 30062 35007 35007 1 LLLPSTATSK Unmodified 1029.607 0.60701105 644 B9EKR1;A0A0J9YVD2 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta yes no 0 0 0 0 11 0 1 62.789 62.789 2 2.3613E-05 16856 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.965 43.561 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12853 644 12386 30063 35008 35008 1 LLLPSTFFCYK Unmodified 1387.721 0.72099495 3190 Q9ERU9 Ranbp2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 0 1 0 1 90.938 90.938 3 0.00072006 32325 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.1 52.236 0 14.567 19.684 0 0 20.254 0 14 19 0 0 19 0 1 1 0 0 1 972.26 12854 3190 12387 30064 35009 35009 1 LLLPTPLLR Unmodified 1034.6852 0.68520179 25 A0A087WQF0 Lppr2 yes yes 0 0 0 0 6.5 5.5 1 1 81.822 81.822 2 0.00045468 22526 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.5 116.73 48.822 25.354 129.15 0 0 127.92 46 28 121 0 0 120 1 1 2 0 0 2 16601 12855 25 12388 30065;30066 35010;35011 35011 2 LLLPTPTIK Unmodified 994.64267 0.64266828 2545 Q8CH18 Ccar1 Cell division cycle and apoptosis regulator protein 1 yes yes 0 0 0 0 11 0 1 74.497 74.497 2 0.0022921 22047 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.005 36.579 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12856 2545 12389 30067 35012 35012 1 LLLPWLEAR Unmodified 1109.6597 0.65971533 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.33 5.22 2 1 2 1 89.871 89.871 2;3 3.7599E-08 28425 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 164.53 86.349 2036 1129.4 1772.3 2158.9 1252.9 1863.9 1951 1167 1767 2135 1302 1782 15 12 10 12 7 14 1504600 12857 2185 12390 30068;30069;30070;30071;30072;30073 35013;35014;35015;35016;35017;35018;35019;35020;35021;35022;35023;35024;35025;35026;35027;35028;35029;35030;35031 35024 19 LLLQDTFLVTDQDAGLLPR Unmodified 2127.1576 0.15756986 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 0 8 0 1 95.401 95.401 3 1.4747E-07 34456 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.353 70.989 0 0 0 12 0 0 0 0 0 12 0 0 0 0 0 1 0 0 1108.1 12858 1894 12391 30074 35032 35032 1 LLLQLEATK Unmodified 1027.6277 0.6277465 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 10 0.816 1 1 1 75.194 75.194 2;3 0.0040882 22219 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 22.313 240.6 209.28 322.38 39.196 396.01 325.31 227 217 309 37 391 314 2 2 1 1 3 2 42047 12859 2844 12392 30075;30076;30077 35033;35034;35035 35035 3 LLLQVQHASK Unmodified 1135.6713 0.67134264 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 8.75 4.55 2 1 3 1 1 53.299 53.299 2;3;4 1.007E-09 11445 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 154.84 99.276 3066.1 3644.9 5769.1 4160.4 1748.4 4989 2880 3681 5703 4125 1810 4714 10 9 11 8 9 7 914120 12860 1585;1607 12393 30078;30079;30080;30081;30082;30083;30084;30085 35036;35037;35038;35039;35040;35041;35042;35043;35044;35045;35046;35047;35048 35045 13 LLLSIPHSDLLDYPK Unmodified 1722.9556 0.95562257 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 0 10 0 1 82.011 82.011 4 0.045189 25843 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.275 14.173 29.577 36.581 47.428 0 47.137 28.503 28 37 46 0 46 28 1 1 1 0 1 1 1590.6 12861 383 12394 30086 35049 35049 1 LLLSSETPIEGK Unmodified 1285.7129 0.71293269 3081 Q9D7N9 Apmap Adipocyte plasma membrane-associated protein yes yes 0 0 0 0 9.33 2.62 1 1 1 68.904 68.904 3 6.0937E-05 23549 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.184 62.331 147.34 71.066 63.624 229.02 0 148.17 138 74 65 213 0 139 3 2 1 3 0 2 14097 12862 3081 12395 30087;30088;30089 35050;35051;35052 35050 3 LLLSTDSAR Unmodified 974.53966 0.53965977 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 10.5 2.5 1 1 55.105 55.105 2 8.5547E-06 16373 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 153.04 92.327 330.04 183.62 652.93 530.39 531.06 0 310 176 637 530 531 0 2 1 3 3 3 0 43864 12863 1348 12396 30090;30091 35053;35054;35055 35054 3 LLLSVLPR Unmodified 909.60114 0.60113781 1839 P84309 Adcy5 Adenylate cyclase type 5 yes yes 0 0 0 0 1 0 1 78.619 78.619 2 0.018991 27385 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.035 53.745 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12864 1839 12397 30092 35056 35056 1 LLLTPWVK Unmodified 968.60589 0.60588884 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 1 0 1 83.702 83.702 2 0.0053134 29452 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.89 37.411 29.807 46.934 0 39.614 43.96 68.036 28 46 0 37 46 65 1 1 0 1 1 1 4184 12865 1438 12398 30093 35057 35057 1 LLLWTQK Unmodified 900.54329 0.54328858 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 1 0 1 75.451 75.451 3 0.005933 26020 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.086 27.105 48.955 35.437 37.661 0 46.807 38.106 46 37 37 0 46 37 1 1 1 0 1 1 2910.7 12866 581 12399 30094 35058 35058 1 LLLWTQQATEGYAGVR Unmodified 1804.9472 0.94718315 2787 S4R1P5;Q91ZU6;E9Q9X1;A0A087WRB8;A0A0A6YX28;A0A0A6YXR1 Dst Dystonin yes no 0 0 0 0 12 0 1 81.26 81.26 3 0.033677 22346 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.5 18.55 20.33 0 9.6355 0 0 0 19 0 9 0 0 0 1 0 1 0 0 0 2642.8 12867 2787 12400 30095 35059 35059 1 LLMSPENLK Oxidation (M);Deamidation (N) 1060.5474 0.54744726 293 A0A1L1SR77;D3YYM4 Wdr72 yes no 0 1 1 0 3 0 1 29.91 29.91 3 0.02326 7299 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.368 8.9359 20.27 0 19.598 19.255 18.312 19.731 19 0 19 19 19 19 1 0 1 1 1 1 1016.8 12868 293 12401 30096 35060 35060 86 18 1 LLNAEYISK Unmodified 1049.5757 0.57571092 878 E9Q0W6;E9Q4K0;Q8BL65 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 0 8.5 0.5 1 1 65.254 65.254 2 0.00073444 21059 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.7 62.586 0 0 0 48.94 71.162 116.3 0 0 0 46 74 111 0 0 0 1 1 1 3777.1 12869 878 12402 30097;30098 35061;35062 35061 2 LLNASAYR Unmodified 906.49232 0.49231565 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 9.5 0.5 1 1 50.826 50.826 2 0.01029 13532 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.009 41.918 0 193.74 185.18 75.593 193.22 211.95 0 185 185 74 195 204 0 2 2 1 2 2 19854 12870 2046 12403 30099;30100 35063;35064 35063 2 LLNDEDQVVVNK Unmodified 1384.7198 0.71980898 1878 Q02248;E9Q6A9;D3YUH4;F6QZ47 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 5.5 0.5 1 1 63.346 63.346 2 4.9172E-06 22305 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.46 77.979 20.292 48.326 18.789 41.534 0 29.848 19 47 19 38 0 28 1 2 1 1 0 1 4075.7 12871 1878 12404 30101;30102 35065;35066 35065 2 LLNDISTALR Unmodified 1114.6346 0.63462279 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 8.5 0.5 1 1 75.313 75.313 2 2.7507E-11 25795 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 163.65 109.13 108.4 59.749 125.71 111 55.922 77.288 102 65 120 111 56 74 1 1 1 1 1 1 31876 12872 992 12405 30103;30104 35067;35068 35067 2 LLNFPTIVER Unmodified 1200.6867 0.68665836 1224 O54984 Asna1 ATPase Asna1 yes yes 0 0 0 0 10 0.816 1 1 1 78.283 78.283 2 0.00018837 23759 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.055 49.551 365.88 326.25 266.42 263.93 174.2 410.77 344 334 273 259 178 390 3 3 2 2 1 3 48653 12873 1224 12406 30105;30106;30107 35069;35070;35071 35071 3 LLNIACAAK Unmodified 972.54264 0.54263666 62 A0A0A6YWG7;E9QNQ4;Q8CHG7;Q5NCJ4;Q5NCJ5;Q5NCJ0;B2RUJ6;Q5NCJ1;A0A1W2P734 Rapgef2;Rapgef6 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 10.5 0.5 1 1 65.194 65.194 2 0.00087093 17793 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.94 50.741 0 0 0 0 0 130 0 0 0 0 0 130 0 0 0 0 0 1 11669 12874 62 12407 30108;30109 35072;35073 35073 2 LLNIQPPPR Unmodified 1046.6237 0.62366417 2754 Q91WD5;D3YXT0;A0A0A6YW30;A0A0A6YXD3 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 10 0 1 60.055 60.055 2 0.001496 16168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.41 58.412 187.09 249.37 240.36 198.07 194.77 124.88 176 250 245 194 199 120 2 3 3 2 2 1 12298 12875 2754 12408 30110 35074;35075;35076 35076 3 LLNKDLAELINK Unmodified 1382.8133 0.81331543 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 10 0 1 77.257 77.257 3 0.0010414 23734 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.83 38.003 87.811 80.017 142 70.916 79.904 106.45 83 83 139 74 83 102 1 1 1 1 1 1 6133.2 12876 3261 12409 30111 35077 35077 1 LLNKPGLK Unmodified 881.56984 0.56983769 774;1429 D3Z494;G5E895;P45377;P21300 Akr1b10;Akr1b8;Akr1b7 Aldose reductase-related protein 2;Aldose reductase-related protein 1 no no 0 0 0 1 8.33 5.19 1 2 53.476 53.476 3 0.018368 11471 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.485 0 576.15 571.32 860.83 778.22 758.68 759.73 543 583 862 772 778 733 2 2 3 3 2 2 228230 12877 774;1429 12410 30112;30113;30114 35078;35079;35080 35079 3 LLNPLVQQLK Unmodified 1164.723 0.72304386 217 F6SRP4;A0A0R4J1Z1;E9Q6Q2;E0CZE3;E9QMI9;E9QJQ9;E0CYT1;E9QMI8;E9QM73;Q3UH66 Wnk2 Serine/threonine-protein kinase WNK2 yes no 0 0 0 0 11.5 0.5 1 1 76.672 76.672 2;3 0.00040015 23019 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.668 42.511 29.704 46.647 17.61 28 48.116 0 28 46 19 28 46 0 1 1 1 1 1 0 7869.4 12878 217 12411 30115;30116 35081;35082 35081 2 LLNQEEGEYYNVPIPEGDEEGNMELR Unmodified 3036.3659 0.36586067 2030 Q4VA93 Prkca Protein kinase C yes yes 0 0 0 0 4 0 1 78.236 78.236 3 0.036542 29215 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 27.309 20.434 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2412 12879 2030 12412 30117 35083 35083 1 LLNQEEGEYYNVPIPEGDEEGNMELR Deamidation (N) 3037.3499 0.34987625 2030 Q4VA93 Prkca Protein kinase C yes yes 0 1 0 0 13 0 1 78.125 78.125 3 2.8422E-06 29958 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.337 41.462 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12880 2030 12412 30118 35084 35084 802 1 LLNQEEGEYYNVPVADADNCSLLQK Unmodified 2881.344 0.34400301 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 6.5 2.99 1 2 2 1 79.142 79.142 3;4 6.3107E-23 29720 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.912 79.704 69.875 201.08 212.97 138.34 204.73 117.65 66 195 214 139 205 112 3 4 5 3 3 2 45900 12881 1783 12413 30119;30120;30121;30122;30123;30124 35085;35086;35087;35088;35089;35090 35086 6 LLNQPNQWPLVK Unmodified 1448.814 0.81398414 1879 Q02257 Jup Junction plakoglobin yes yes 0 0 0 0 10 0 1 75.631 75.631 3 0.0035556 22924 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.225 34.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12882 1879 12414 30125 35091 35091 1 LLNSDLGELISK Unmodified 1300.7238 0.72383172 1509 P34152 Ptk2 Focal adhesion kinase 1 yes yes 0 0 0 0 8 0 1 82.107 82.107 3 0.00016392 28993 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.469 39.892 0 19.729 29.112 0 29.288 0 0 19 28 0 28 0 0 1 1 0 1 0 2293.9 12883 1509 12415 30126 35092 35092 1 LLNTAGGYPYSFWIGR Unmodified 1813.9152 0.91515474 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 11.7 0.471 1 2 86.592 86.592 2;3 0.00016065 24419 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.577 49.088 19 9 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 0 46039 12884 1226 12416 30127;30128;30129 35093;35094;35095 35095 3 LLNTFLER Unmodified 1004.5655 0.56548059 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9.5 0.5 1 1 72.939 72.939 2 0.01143 23966 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.467 53.706 88.692 140.89 61.497 186.26 129.83 204.17 83 139 65 176 139 195 1 2 1 2 2 2 43156 12885 3204 12417 30130;30131 35096;35097 35096 2 LLNTPDGSPYTWWVGK Unmodified 1832.9097 0.90973501 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 10 0.816 1 1 1 87.657 87.657 3 0.00014664 27880 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.965 51.373 59.434 54.51 91.764 97.147 37.328 59.696 56 56 93 93 37 56 1 1 2 2 1 1 16234 12886 970 12418 30132;30133;30134 35098;35099;35100 35100 3 LLPASFPCIFGPGEDQPLSPEASR Unmodified 2584.2632 0.26317392 2574 Q8K010;E9Q484 Oplah 5-oxoprolinase yes no 0 0 0 0 9 0 1 92.708 92.708 3 0.00010263 32966 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.058 44.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1856.9 12887 2574 12419 30135 35101 35101 1 LLPFLSNPYR Unmodified 1218.6761 0.67609367 951 E9QJU8;Q8CG79 Trp53bp2;Tp53bp2 Apoptosis-stimulating of p53 protein 2 yes no 0 0 0 0 1 0 1 81.645 81.645 2 0.0010128 28551 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.162 21.448 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 1448.1 12888 951 12420 30136 35102 35102 1 LLPGIEVLWTGPK Unmodified 1421.8282 0.82823722 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 11 0.816 1 1 1 93.593 93.593 3 1.1545E-06 30562 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.692 66.424 20.149 0 39.932 0 57.607 47.204 19 0 37 0 56 47 1 0 1 0 1 2 8667.6 12889 3176 12421 30137;30138;30139 35103;35104;35105 35103 3 LLPGYYMNLNQNPR Unmodified 1691.8454 0.84536062 1044 F8WHW6;O70161;P70181 Pip5k1c;Pip5k1b Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma;Phosphatidylinositol 4-phosphate 5-kinase type-1 beta no no 0 0 0 0 11.5 0.5 1 1 72.187 72.187 2 8.748E-07 21048 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.46 92.212 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10552 12890 1044 12422 30140;30141 35106;35107 35106 2 LLPIDGANDLFFQPPPLTPTSK Unmodified 2380.2678 0.26784859 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 8.5 0.5 1 1 97.036 97.036 3 0.00025229 34917 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.737 36.691 0 19.902 18.756 13.645 28.661 0 0 19 19 14 28 0 0 1 1 1 1 0 3194.2 12891 3176 12423 30142;30143 35108;35109 35108 2 LLPIMCAYK Unmodified 1107.5821 0.58205863 854 Q6ZPQ6;E9PYJ7 Pitpnm2 Membrane-associated phosphatidylinositol transfer protein 2 no no 0 0 0 0 12 0 1 77.58 77.58 2 0.0027622 20943 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.297 47.044 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12892 854 12424 30144 35110 35110 1 LLPLEEHYR Unmodified 1168.6241 0.6240581 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 no no 0 0 0 0 7.5 0.5 1 1 55.168 55.168 3 0.0021524 16878 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.173 63.649 0 48.944 0 40.441 0 49.036 0 46 0 37 0 46 0 1 0 1 0 1 5958.6 12893 3353 12425 30145;30146 35111;35112 35111 2 LLPLNDCR Unmodified 999.51715 0.51715019 1549 P45591 Cfl2 Cofilin-2 yes yes 0 0 0 0 8 0 1 58.315 58.315 2 0.005356 17811 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.7 70.672 0 135.6 162.82 0 177.82 0 0 130 158 0 170 0 0 1 1 0 1 0 16748 12894 1549 12426 30147 35113 35113 1 LLPPEDNPLWQYLLSR Unmodified 1953.036 0.035998161 2412 Q8BIG7 Comtd1 Catechol O-methyltransferase domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 99.73 99.73 3 1.3582E-05 32599 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.797 61.538 52.679 0 0 15.302 0 0 51 0 0 14 0 0 2 0 0 1 0 0 3792.6 12895 2412 12427 30148;30149 35114;35115;35116;35117 35115 4 LLPQVMYLDGYDR Unmodified 1581.7861 0.78611441 720 D3YYE1;D3Z7M9;O35381 Anp32a Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 0 8 0 1 82.421 82.421 2 0.01192 29139 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.448 27.509 29.794 27.469 18.76 0 47.488 48.747 28 28 19 0 47 47 1 1 1 0 1 1 2173.9 12896 720 12428 30150 35118 35118 1 LLPVGALYK Unmodified 972.6008 0.60080346 295 A0A1L1SRN0;Q9R1Z7 Pts 6-pyruvoyl tetrahydrobiopterin synthase yes no 0 0 0 0 8 4.97 1 1 1 74.952 74.952 2 0.00093645 19667 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.35 46.695 0 76.968 155.52 0 29.288 49.036 0 74 148 0 28 46 0 2 3 0 1 1 56708 12897 295 12429 30151;30152;30153 35119;35120;35121 35121 3 LLPVLIHTFWIDAK Unmodified 1664.9654 0.9653994 768 D3Z3F4;F7C846;G3XA66;P47802;G3XA75;G3UXX9;G3UXB5 Mtx1 Metaxin-1 yes no 0 0 0 0 13 0 1 99.796 99.796 3 0.012866 40355 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.209 29.442 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1264.5 12898 768 12430 30154 35122 35122 1 LLPVLQEALSAYLDSAK Unmodified 1830.0139 0.013865735 2415 Q8BIW1 Prune Protein prune homolog yes yes 0 0 0 0 12.5 0.5 1 1 112.76 112.76 3 7.6416E-18 30466 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.5 106.42 12.789 7.161 8.613 0 16.203 15.528 12 7 8 0 16 15 2 1 1 0 2 2 4197.7 12899 2415 12431 30155;30156 35123;35124 35123 2 LLPVQENFLLK Unmodified 1312.7755 0.77547336 1892;1359 Q08331;Q8CCS7;P12658 Calb2;Calb1 Calretinin;Calbindin no no 0 0 0 0 10.9 1.25 1 2 2 1 1 84.189 84.189 2;3 9.8236E-09 26869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.51 73.406 149.73 201.66 27.082 246.72 505.84 127.92 140 195 28 233 501 120 3 4 1 5 5 1 212260 12900 1892;1359 12432 30157;30158;30159;30160;30161;30162;30163 35125;35126;35127;35128;35129;35130;35131;35132;35133 35128 9 LLPVVSSLPK Unmodified 1051.6641 0.664132 2223 Q6P5U7 Nwd2 NACHT and WD repeat domain-containing protein 2 yes yes 0 0 0 0 11.5 0.5 1 1 75.668 75.668 2 0.00018867 19996 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.033 43.625 79.402 0 0 39.937 26.784 79.186 74 0 0 37 28 75 2 0 0 1 1 2 12272 12901 2223 12433 30164;30165 35134;35135 35135 2 LLPVYLNCVLK Unmodified 1330.7683 0.7682795 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 0 4.67 5.19 2 1 87.318 87.318 2;3 0.00078983 24507 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.276 46.535 19 29.681 6.6114 30.21 0 29.848 19 28 9 28 0 28 1 1 1 1 0 1 8905.5 12902 366 12434 30166;30167;30168 35136;35137;35138 35138 3 LLQAAYLSK Unmodified 1005.5859 0.58588168 2317 Q80UG2 Plxna4 Plexin-A4 yes yes 0 0 0 0 11.5 0.5 1 1 68.068 68.068 2 0.00086782 17130 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.692 61.176 118.7 80.308 0 0 142.13 95.082 111 83 0 0 139 93 1 1 0 0 1 1 13052 12903 2317 12435 30169;30170 35139;35140 35140 2 LLQAISR Unmodified 799.49159 0.49158736 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 10 0 1 57.217 57.217 2 0.016609 14803 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.65 23.005 295.22 229.01 321.87 375.24 240.53 413.14 278 239 327 365 260 394 1 1 1 1 1 1 57192 12904 2727 12436 30171 35141 35141 1 LLQASFK Unmodified 805.46979 0.46978929 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 10 0 1 63.056 63.056 2 0.026936 17321 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.142 33.132 238.13 227.6 0 282.5 263.89 283.49 223 229 0 263 274 273 1 1 0 1 1 1 34502 12905 722 12437 30172 35142 35142 1 LLQAVEPIHLAR Unmodified 1358.8034 0.80341945 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 9 0 1 65.106 65.106 3 0.0001449 20332 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.709 60.337 118.36 0 125.63 81.008 118.18 105.36 111 0 120 83 120 102 1 0 1 1 1 1 8981.8 12906 2418 12438 30173 35143 35143 1 LLQCDPSSAGQF Unmodified 1321.5973 0.597251 2763 Q91X97 Ncald Neurocalcin-delta yes yes 0 0 0 0 7.75 3.11 1 1 1 1 72.387 72.387 2 0.00069553 25122 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.261 55.746 61.025 27.052 105.68 162.44 75.475 117.55 57 28 102 158 74 111 2 1 1 3 2 2 45245 12907 2763 12439 30174;30175;30176;30177 35144;35145;35146;35147 35146 4 LLQCDPSSASQF Unmodified 1351.6078 0.60781569 1832;1734 P62748;P84075 Hpcal1;Hpca Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 0 6.5 1.12 1 1 1 1 72.058 72.058 2 1.685E-07 25838 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.95 97.998 49.189 96.544 195.24 96.573 131.77 84.745 46 93 190 96 133 81 1 3 5 3 4 2 88696 12908 1734;1832 12440 30178;30179;30180;30181 35148;35149;35150;35151;35152 35150 5 LLQCYPPPDPAVR Unmodified 1524.7759 0.77588407 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8 0 1 62.735 62.735 3 0.010162 19854 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.28 31.374 0 59.584 0 48.895 73.546 46.937 0 56 0 46 74 46 0 1 0 1 1 1 8869.5 12909 1401 12441 30182 35153 35153 1 LLQCYPPPEDAAVK Unmodified 1599.7967 0.79667909 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 10 3 1 1 65.009 65.009 3 0.00010058 23525 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.467 64.269 129.28 109.39 0 59.981 65.235 39.442 121 111 0 56 65 37 2 2 0 1 1 1 22969 12910 1400 12442 30183;30184 35154;35155 35155 2 LLQDFFNGK Deamidation (N) 1081.5444 0.5444108 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 1 0 0 9.6 2.01 1 3 2 1 1 2 84.238 84.238 2;3 0.00049718 26561 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.1 94.851 997.44 541.61 906.9 787.91 636.16 918.69 937 564 887 766 641 870 9 6 7 7 7 6 393800 12911 1397;1762 12443 30185;30186;30187;30188;30189;30190;30191;30192;30193;30194 35156;35157;35158;35159;35160;35161;35162;35163;35164;35165;35166 35162 476 11 LLQDFFNGK Unmodified 1080.5604 0.56039521 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 0 11.3 1.39 1 1 2 1 2 82.789 82.789 2;3 0.0009881 32120 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.3 78.636 717.08 142.3 546.88 555.91 718.97 676.56 672 146 520 537 720 648 8 2 6 9 6 8 172290 12912 1397;1762 12443 30195;30196;30197;30198;30199;30200;30201 35167;35168;35169;35170;35171;35172;35173;35174;35175;35176 35174 10 LLQDFFNGKELNK Deamidation (N) 1565.809 0.80895834 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 1 0 1 10.2 1.64 2 1 1 79.387 79.387 3 9.4216E-05 24579 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.83 55.919 313.37 503.96 479.14 631.13 432.76 847.91 296 493 476 611 449 807 3 3 3 4 3 4 93931 12913 1397;1762 12444 30202;30203;30204;30205 35177;35178;35179;35180 35179 476 4 LLQDLFPK Unmodified 972.56442 0.56441796 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 10 0.816 1 1 1 82.839 82.839 2;3 0.0032957 26387 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.92 48.537 138.43 90.169 101.17 136.06 0 154.73 130 92 102 130 0 148 3 2 2 2 0 3 14967 12914 2054 12445 30206;30207;30208 35181;35182;35183;35184 35183 4 LLQDLLSEEENQEK Unmodified 1686.8312 0.83120992 1061 G3UXM5;G3UWV4;Q69Z98;G3UZ19;G3UYN4 Brsk2 Serine/threonine-protein kinase BRSK2 yes no 0 0 0 0 5 0 1 84.735 84.735 3 0.0076954 32311 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.807 24.426 29.904 27.776 0 30.256 18.484 0 28 28 0 28 19 0 1 1 0 1 1 0 2663.2 12915 1061 12446 30209 35185 35185 1 LLQDSVDFSLADAINTEFK Unmodified 2125.0579 0.057915395 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 7 0.816 1 1 1 97.539 97.539 3 3.0841E-09 36710 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.031 60.724 15.96 8.2381 15.655 0 12.234 9.2449 15 9 15 0 12 9 1 1 1 0 1 1 1932.7 12916 1423 12447 30210;30211;30212 35186;35187;35188 35186 3 LLQDVDINR Unmodified 1084.5877 0.58767259 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 6 0 1 61.719 61.719 2 0.0035966 20906 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.264 25.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12917 3165 12448 30213 35189 35189 1 LLQFVTGTCR Unmodified 1193.6227 0.62267789 2482 Q8BZZ3;Q3TXI7;A0A1D5RM92;Q8C863;Q9DBH0 Wwp1;Wwp2;Itch NEDD4-like E3 ubiquitin-protein ligase WWP1;E3 ubiquitin-protein ligase Itchy;NEDD4-like E3 ubiquitin-protein ligase WWP2 yes no 0 0 0 0 1 0 1 73.321 73.321 2 0.010706 24929 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.5 27.34 39.366 66.506 0 29.725 46.751 0 37 65 0 28 46 0 1 1 0 1 1 0 4989.7 12918 2482 12449 30214 35190 35190 1 LLQFVTGTSR Unmodified 1120.6241 0.6240581 844;1559 P46935;E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4;Nedd4l E3 ubiquitin-protein ligase NEDD4;E3 ubiquitin-protein ligase NEDD4-like no no 0 0 0 0 6.5 5.5 1 1 72.609 72.609 2;3 2.2589E-06 18661 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.76 19.362 88.283 80.19 86.23 0 82.835 115.96 83 84 83 0 83 111 1 2 1 0 1 1 35009 12919 1559;844 12450 30215;30216 35191;35192 35192 2 LLQFVTGTSSIPYEGFASLR Unmodified 2185.1419 0.1419198 2195 Q6I6G8 Hecw2 E3 ubiquitin-protein ligase HECW2 yes yes 0 0 0 0 12 0 1 95.295 95.295 3 1.7308E-05 27338 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.223 43.738 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1947.9 12920 2195 12451 30217 35193 35193 1 LLQGRPPLDFYPPGVHPSGLVPR Unmodified 2511.375 0.37504805 1063 Q7TSC1;G3UX48 Prrc2a Protein PRRC2A yes no 0 0 0 1 11 0 1 70.998 70.998 4 0.047726 20597 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.249 7.8137 48.865 44.9 44.78 46.065 82.073 76.542 46 46 46 46 83 74 1 1 1 1 1 1 4513.7 12921 1063 12452 30218 35194 35194 1 LLQISLWGNK Unmodified 1170.6761 0.67609367 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 1 0 1 83.846 83.846 3 0.0011605 29435 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.162 37.738 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 999.62 12922 556 12453 30219 35195 35195 1 LLQISSFNGK Unmodified 1105.6132 0.61315906 1813 Q4FE56;P70398;F8VPU6;E9PWA9 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 11 0 1 69.904 69.904 3 7.3683E-05 20045 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.355 45.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12923 1813 12454 30220 35196 35196 1 LLQKPLDSQSIYQLIEISR Unmodified 2243.2525 0.25253288 1882 Q03517 Scg2 Secretogranin-2;Secretoneurin;Manserin yes yes 0 0 0 1 10.5 0.5 1 1 85.639 85.639 3 4.2175E-07 27416 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.718 82.629 73.515 103.57 0 0 0 39.442 69 102 0 0 0 37 2 2 0 0 0 1 19645 12924 1882 12455 30221;30222 35197;35198 35197 2 LLQLLFSFIGSK Unmodified 1364.8068 0.80677349 3428 yes no 0 0 0 0 1 0 1 57.428 57.428 4 0.065329 18361 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 32.498 9.6191 39.564 27.124 0 20.234 28.359 0 37 28 0 19 28 0 1 1 0 1 1 0 1373.7 + 12925 3428 12456 30223 35199 35199 1 LLQLTEK Unmodified 843.50657 0.50656873 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9.75 1.92 1 2 1 64.591 64.591 2;3 0.0073831 20818 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.18 34.867 257.58 538.7 713.97 499.75 239.03 145.5 241 525 710 491 232 139 3 2 2 2 2 2 148480 12926 2148 12457 30224;30225;30226;30227 35200;35201;35202;35203 35200 4 LLQNIGIDK Unmodified 1012.5917 0.59169534 2489 Q8C145 Slc39a6 Zinc transporter ZIP6 yes yes 0 0 0 0 9 0 1 70.158 70.158 2 0.0064441 22709 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.231 34.601 0 48.944 0 69.827 64.782 0 0 46 0 65 65 0 0 1 0 1 1 0 3759.2 12927 2489 12458 30228 35204 35204 1 LLQPPAPIMPLDTNWPLLTVSK Unmodified 2443.3549 0.35488946 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 10.5 0.5 1 1 102.97 102.97 3;4 3.1942E-06 34123 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.223 44.969 0 0 0 6.4455 5.9799 0 0 0 0 6 6 0 0 0 0 1 1 0 1583.9 12928 1043 12459 30229;30230 35205;35206 35206 2 LLQPVIVSPSGTILR Unmodified 1591.9661 0.96612768 738 D3Z2Q2;D3Z079;Q8K400;F6WXQ4 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 0 11 0.816 1 1 1 78.641 78.641 2;3 1.3789E-10 24428 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.79 80.601 0 0 20.558 29.743 65.643 65.542 0 0 19 28 65 65 0 0 1 1 2 2 31218 12929 738 12460 30231;30232;30233 35207;35208;35209;35210 35207 4 LLQQVAQIYQSIEFSR Unmodified 1922.0262 0.026161756 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 12 0.816 1 1 1 98.944 98.944 3 8.4787E-06 32551 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.911 56.072 14.894 47.395 32.599 4.2376 67.553 0 14 46 33 5 66 0 1 2 2 1 3 0 11254 12930 1438 12461 30234;30235;30236 35211;35212;35213 35211 3 LLQSVGQAPESISEK Unmodified 1584.8359 0.83590137 812 E0CZE0;Q8VBW6 Nae1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 0 7 0 1 66.059 66.059 3 0.00067369 22064 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.513 31.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12931 812 12462 30237 35214 35214 1 LLQTDDEEEAGLLELLK Unmodified 1927.999 0.99900353 3186 Q9ERK4;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 5 0 1 95.981 95.981 3 0.00021355 35498 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.121 35.753 9.612 8.9279 0 9.837 0 43.706 9 9 0 9 0 41 1 1 0 1 0 1 2004.6 12932 3186 12463 30238 35215 35215 1 LLQTLPQLR Unmodified 1080.6655 0.66552898 496 A2AN08;F6SSP6 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 11 0 1 70.297 70.297 2 0.0011207 20239 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.921 31.818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12933 496 12464 30239 35216 35216 1 LLQTSNITK Unmodified 1016.5866 0.58660996 1099;2106;2556 Q8CIN4;A0A0U1RQ87;G5E884;O88643;S4R2K7;Q61036;A3KGC5;A3KGC4;A3KGC3 Pak2;Pak1;Pak3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 0 0 0 10 0.816 1 1 1 57.04 57.04 2 0.0018274 14263 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.815 43.094 88.087 177.52 227.68 275.07 285.7 115.26 83 176 232 269 289 111 1 2 2 2 2 1 58959 12934 2556;1099;2106 12465 30240;30241;30242 35217;35218;35219 35219 3 LLQVLVPQVEK Unmodified 1264.7755 0.77547336 2641 Q8R1F6 Hid1 Protein HID1 yes yes 0 0 0 0 11 0 1 81.992 81.992 3 0.00053276 25596 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.64 59.776 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 5723.8 12935 2641 12466 30243 35220 35220 1 LLQYADALEHLLSTGQGVVLER Unmodified 2424.3013 0.30127398 2859 Q99LC3;A0A087WR38 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 0 10.6 2.06 1 1 1 2 101.09 101.09 3;4 2.6541E-22 32740 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.46 82.548 20.121 31.141 48.155 28.576 39.015 112.76 19 31 46 27 40 108 1 3 3 3 3 6 19974 12936 2859 12467 30244;30245;30246;30247;30248 35221;35222;35223;35224;35225;35226;35227;35228 35225 8 LLRPNSLK Unmodified 939.58655 0.58655038 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 1 11 0 1 47.975 47.975 3 0.029938 10744 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.265 24.718 0 0 359.99 201.52 0 305.94 0 0 341 204 0 287 0 0 1 1 0 1 15786 12937 204 12468 30249 35229 35229 1 LLSAEER Unmodified 816.43413 0.43413207 410;3398 A0A338P6R8;A0A338P769;A0A338P755;A2ARU0;Q8BYR1;Q9Z2Q6;B7ZNM7;A0A338P729 Lcmt2;Sept5 tRNA wybutosine-synthesizing protein 4;Septin-5 no no 0 0 0 0 13 0 1 43.622 43.622 2 0.027706 13170 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.473 26.095 343.76 204.82 300.27 377.19 379.41 265.27 323 219 306 368 388 259 1 1 1 1 1 1 26446 12938 410;3398 12469 30250 35230 35230 1 LLSAEFLEQHYDR Unmodified 1619.7944 0.79437091 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 6 0 1 67.595 67.595 3 0.043596 23654 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.107 22.907 0 39.368 0 29.725 46.751 0 0 37 0 28 46 0 0 1 0 1 1 0 5949.6 12939 1888 12470 30251 35231 35231 1 LLSAGATR Unmodified 787.4552 0.45520186 1064 G3UXL2;Q9D7G0 Prps1l3;Prps1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 0 9 0 1 43.397 43.397 2 0.011497 10167 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.195 39.844 263.55 81.181 0 0 324.26 0 246 93 0 0 310 0 1 1 0 0 1 0 30065 12940 1064 12471 30252 35232 35232 1 LLSALIR Unmodified 784.51707 0.51707383 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 8.67 5.44 1 1 1 72.361 72.361 2 0.0052869 24799 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.88 32.037 461.75 427.24 473.54 672.19 225.64 635.29 434 435 475 651 241 602 3 3 3 5 1 4 231980 12941 919;937 12472 30253;30254;30255 35233;35234;35235;35236;35237 35234 5 LLSASTGGLKPSK Unmodified 1257.7293 0.72925145 110 A0A0J9YTU3;Q5SXY1;A0A0J9YUR2;A0A0J9YUG8 Specc1 Cytospin-B yes no 0 0 0 1 11.5 0.5 1 1 55.257 55.257 3 0.007974 12409 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.95 27.621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5159.3 12942 110 12473 30256;30257 35238;35239 35239 2 LLSATDTLDEAER Unmodified 1432.7046 0.70455285 80 A0A0G2JDM6;P21836 Ache Acetylcholinesterase yes no 0 0 0 0 4 0 1 63.879 63.879 2 0.036354 22713 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.844 20.223 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12943 80 12474 30258 35240 35240 1 LLSCSADGTLR Unmodified 1191.5918 0.59177169 1236 O55106;F8WH41 Strn Striatin yes no 0 0 0 0 7.5 0.5 1 1 54.439 54.439 2 0.0019727 16625 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.363 30.094 20.387 0 0 0 45.122 87.19 19 0 0 0 46 83 1 0 0 0 1 1 2271.2 12944 1236 12475 30259;30260 35241;35242 35241 2 LLSEDPANYADAPTEGIR Unmodified 1930.9272 0.92723557 2574 Q8K010;E9Q484;A0A1B0GSQ4;E9PZB8 Oplah 5-oxoprolinase yes no 0 0 0 0 4 0 1 68.565 68.565 3 0.016161 24689 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.133 14.18 20.149 0 39.932 0 0 0 19 0 37 0 0 0 1 0 1 0 0 0 2381.5 12945 2574 12476 30261 35243 35243 1 LLSEEVFDFSSGQITQVK Unmodified 2026.0259 0.025886985 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 7 0 1 88.061 88.061 3 1.8166E-06 32474 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.584 53.9 0 20.216 29.937 48.174 17.023 49.616 0 19 28 46 19 47 0 1 1 2 1 2 1789.6 12946 2222 12477 30262 35244;35245 35245 2 LLSGEDVGQDEGATR Unmodified 1545.7271 0.7270792 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 4 0 1 52.885 52.885 3 0.03085 17680 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.757 5.9496 0 39.368 0 0 29.288 0 0 37 0 0 28 0 0 1 0 0 1 0 4852.7 12947 893 12478 30263 35246 35246 1 LLSGGSMLDIIK Unmodified 1245.7003 0.70025951 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 0 0 0 10 0 1 84.608 84.608 2 0.017152 26953 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.683 23.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12948 3386 12479 30264 35247 35247 1 LLSGVLPFR Unmodified 1000.607 0.60695147 305 A0A1L1STC6;Q6ZWR6;A0A1L1SRV6 Syne1 Nesprin-1 yes no 0 0 0 0 6.5 5.5 1 1 80.351 80.351 2 0.021823 21875 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.419 37.525 0 29.792 0 0 47.137 28.503 0 28 0 0 46 28 0 1 0 0 1 1 6648.2 12949 305 12480 30265;30266 35248;35249 35249 2 LLSHCLLVTLASHHPADFTPAVHASLDK Unmodified 3049.5808 0.58076008 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 11 0 1 71.394 71.394 5 3.1221E-05 20718 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.12 29.618 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 0 0 25000 12950 2735 12481 30267 35250 35250 1 LLSIAGTRPSVR Unmodified 1268.7565 0.75646926 3179 Q9ER73 Elp4 Elongator complex protein 4 yes yes 0 0 0 1 1 0 1 53.249 53.249 3 0.0048982 16530 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.476 9.058 59.91 35.328 0 40.133 16.362 48.569 56 37 0 37 19 46 1 1 0 1 1 1 3931.5 12951 3179 12482 30268 35251 35251 1 LLSIVNVCK Unmodified 1044.6002 0.60015154 2213 Q6P1Y9;Q5PPR2;Q8R3S6 Exoc1 Exocyst complex component 1 yes no 0 0 0 0 12 0 1 74.04 74.04 2 0.0027994 19356 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.6 56.786 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12952 2213 12483 30269 35252 35252 1 LLSLGAQANFFHPEK Unmodified 1670.878 0.87804096 2046 Q5F258;Q68FF6;D3Z409;F6WV69;F7BIK4;Q80XR8;J3QK07;D3Z1I2;E9PVA6;Q9JLQ2 Git1;Git2 ARF GTPase-activating protein GIT1;ARF GTPase-activating protein GIT2 yes no 0 0 0 0 10.7 0.471 1 2 73.792 73.792 3;4 0.0013241 21759 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.172 30.299 49.128 162.17 218.05 121.84 101.09 69.29 46 157 213 120 102 65 1 2 2 1 1 1 30958 12953 2046 12484 30270;30271;30272 35253;35254;35255 35255 3 LLSLIGR Unmodified 770.50142 0.50142377 605 E9PV45;B1AY13 Usp24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 0 6.5 5.5 1 1 73.035 73.035 2 0.027262 18829 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.677 15.843 0 28.687 113.78 103.19 80.758 38.45 0 28 111 102 83 37 0 1 2 2 2 1 6303.5 12954 605 12485 30273;30274 35256;35257 35257 2 LLSLISIALPENK Unmodified 1409.8494 0.84936659 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 1 0 1 101.1 101.1 3 1.8689E-05 34023 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 102.66 79.435 5.365 13.832 0 3.1637 6.1307 5.33 5 13 0 3 6 5 1 1 0 1 1 1 589.16 12955 459 12486 30275 35258;35259 35259 2 LLSLPTSLRPHK Unmodified 1360.8191 0.81906951 1951 Q3U0M1;E9PZ41;E9Q3T8 Trappc9 Trafficking protein particle complex subunit 9 yes no 0 0 0 1 1 0 1 60.525 60.525 4 0.0041356 19845 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.259 25.172 49.128 45.631 0 50.278 0 59.696 46 46 0 46 0 56 1 1 0 1 0 1 4484.6 12956 1951 12487 30276 35260 35260 1 LLSLQPPGMTPVSQAPR Unmodified 1790.9713 0.97128941 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 0 12 0 1 73.783 73.783 3 0.00032451 19233 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.851 20.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12957 3053 12488 30277 35261 35261 1 LLSLVDDEAFIR Unmodified 1389.7504 0.75038083 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 8.5 2.69 1 1 1 1 87.742 87.742 2;3 9.4204E-49 31728 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 199.4 158.89 29.812 107.46 102.94 18.439 54.605 147.41 28 102 102 19 56 139 1 2 3 1 2 2 38774 12958 2555 12489 30278;30279;30280;30281 35262;35263;35264;35265 35264 4 LLSMAYSAVGK Unmodified 1138.6056 0.60563084 492 A2ALV7;Q6PDI5;A2ALV8;A2ALV6 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 12 0 1 76.585 76.585 3 0.004035 20471 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.359 36.723 49.358 0 0 0 49.162 0 46 0 0 0 47 0 1 0 0 0 1 0 1955.8 12959 492 12490 30282 35266 35266 1 LLSNDEVTIK Unmodified 1130.6183 0.61830402 3372 Q9Z1A1;B8JJG7;B8JJG8;B8JJG6;B8JJG9 Tfg yes no 0 0 0 0 13 0 1 63.725 63.725 3 0.0071076 22959 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.401 9.8025 49.176 36.052 0 0 65.345 77.019 46 37 0 0 65 74 1 1 0 0 1 1 5606.7 12960 3372 12491 30283 35267 35267 1 LLSNPLLQTYLPNSTK Unmodified 1800.9986 0.99855002 2641 Q8R1F6 Hid1 Protein HID1 yes yes 0 0 0 0 8 4.97 1 1 1 84.464 84.464 3 7.1028E-06 29934 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.983 55.388 29.817 19 38.184 38.165 0 0 28 19 37 37 0 0 1 1 1 1 0 0 8553.7 12961 2641 12492 30284;30285;30286 35268;35269;35270 35268 3 LLSPFMPFVTEELFQR Unmodified 1953.007 0.0070062184 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 10 0 1 106.02 106.02 3 0.00070869 33721 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.823 38.86 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 775.33 12962 3383 12493 30287 35271 35271 1 LLSPGSVMLVSAR Unmodified 1328.7486 0.74860669 2766 Q91XH5;G3UXX3;Q64105;G3UZ79 Spr Sepiapterin reductase yes no 0 0 0 0 8.75 4.49 1 2 1 74.194 74.194 2;3 6.7289E-15 21831 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 135.16 96.369 306.11 100.55 223.45 260.65 240.58 273.83 287 102 214 250 241 259 6 2 4 4 4 3 62363 12963 2766 12494 30288;30289;30290;30291 35272;35273;35274;35275;35276;35277;35278 35274 7 LLSPILAR Unmodified 881.56984 0.56983769 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 12 0 1 68.056 68.056 2 0.043135 17138 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.429 27.623 39.366 66.506 0 0 0 0 37 65 0 0 0 0 1 1 0 0 0 0 11928 12964 179 12495 30292 35279 35279 1 LLSPVAAASAAR Unmodified 1125.6506 0.6506072 2258 Q6WQJ1 Dagla Sn1-specific diacylglycerol lipase alpha yes yes 0 0 0 0 10 0 1 58.342 58.342 2 0.008613 15290 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.691 25.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12965 2258 12496 30293 35280 35280 1 LLSPVFSIAPK Unmodified 1170.7012 0.70124579 334 A0A1Y7VJM7;A0A1Y7VIL8;B2RQF5;A0A217FL82;Q3UV20;P60755 Mdga2 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 yes no 0 0 0 0 6.5 5.5 1 1 82.363 82.363 3 0.00012862 22612 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.24 62.508 0 0 0 20.767 0 20.254 0 0 0 19 0 19 0 0 0 1 0 1 2347.9 12966 334 12497 30294;30295 35281;35282 35282 2 LLSQEEGEYFNVPVPPEGSEGNEELR Unmodified 2917.3618 0.36176157 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 4 0.707 1 2 1 79.23 79.23 3;4 2.9188E-20 30021 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.202 71.571 18.657 10.64 0 19.93 5 33.924 18 10 0 19 5 33 2 2 0 3 1 3 17150 12967 1796 12498 30296;30297;30298;30299 35283;35284;35285;35286;35287;35288;35289 35284 7 LLSQEEQTSK Unmodified 1161.5877 0.58773217 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8;A0A0J9YV63;A0A0J9YUZ2 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 6 0 1 49.078 49.078 2 8.4252E-05 14899 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.46 64.271 20.141 28.142 17.473 29.062 26.625 38.682 19 28 19 28 28 37 1 1 1 1 1 1 2410.8 12968 992 12499 30300 35290 35290 1 LLSQVADILFQTAK Unmodified 1545.8766 0.87664397 1366 P13439 Umps Uridine 5'-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5'-phosphate decarboxylase yes yes 0 0 0 0 12 0 1 103.25 103.25 3 8.566E-05 28980 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.163 65.558 12.822 0 9.1133 12.573 0 0 12 0 9 12 0 0 1 0 1 1 0 0 1246.1 12969 1366 12500 30301 35291 35291 1 LLSRQNLQSPK Unmodified 1282.7357 0.73573382 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 1 8 0 1 45.018 45.018 3 0.063625 11587 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.188 0.19685 146.94 173.61 224.25 156.32 160.14 244.87 139 176 224 158 168 234 1 1 1 1 1 1 13494 12970 1039 12501 30302 35292 35292 1 LLSTDPVAAK Unmodified 1013.5757 0.57571092 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 8.5 0.5 1 1 61.039 61.039 2;3 0.0021165 18315 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.308 45.199 99.348 33.937 45.305 46.713 45.97 59.696 93 37 46 46 46 56 2 1 1 1 1 1 18126 12971 1203 12502 30303;30304 35293;35294 35294 2 LLSTDPVTAK Unmodified 1043.5863 0.58627561 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 60.785 60.785 2;3 2.1282E-08 19719 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 145.84 96.025 575.52 484.31 610.09 423.52 535.74 536.9 541 486 603 412 543 518 5 6 5 5 5 5 129560 12972 3123 12503 30305;30306;30307;30308;30309 35295;35296;35297;35298;35299;35300;35301 35296 7 LLSTSPALQGTPASR Unmodified 1497.8151 0.81510635 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 58.568 58.568 2;3 2.4607E-22 15395 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.4 101.13 87.262 238.31 235.85 204.32 83.517 145.79 83 232 232 195 84 139 2 3 3 4 2 3 90847 12973 3355 12504 30310;30311;30312;30313;30314 35302;35303;35304;35305;35306 35304 5 LLSTYICK Unmodified 996.5314 0.53140327 439 A2AAN0;O35250 Exoc7 Exocyst complex component 7 yes no 0 0 0 0 11 0 1 67.731 67.731 2 0.014111 18960 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.011 35.404 0 0 0 80.882 0 99.138 0 0 0 74 0 93 0 0 0 1 0 1 14841 12974 439 12505 30315 35307 35307 1 LLSVLNQMPQR Unmodified 1297.7176 0.71764091 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 1 0 1 73.861 73.861 2 0.0057211 25173 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.347 14.469 30.006 7.5527 0 0 0 20.254 28 9 0 0 0 19 1 1 0 0 0 1 1695.2 12975 3165 12506 30316 35308 35308 1 LLSVPFEK Unmodified 931.53787 0.53786886 2911 Q9CQ60;D3Z4X1 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 10 0 1 73.969 73.969 3 0.012108 22302 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.436 38.93 59.958 25.749 0 29.217 73.755 67.185 56 28 0 28 74 65 1 1 0 1 1 1 5380.7 12976 2911 12507 30317 35309 35309 1 LLSVTHK Unmodified 796.48069 0.48068833 2521 Q8CC88 Vwa8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 0 10 0 1 47.275 47.275 3 0.011382 10656 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.415 34.752 118.21 69.234 91.591 96.19 0 108.73 111 74 93 93 0 102 1 1 1 1 0 1 4739.2 12977 2521 12508 30318 35310 35310 1 LLSVTPTSEGYSIK Unmodified 1493.7977 0.79772495 1051 H7BXB9;F8WIU1;Q9D1K7 1700037H04Rik UPF0687 protein C20orf27 homolog yes no 0 0 0 0 9 0 1 70.476 70.476 2 5.2542E-11 22936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.01 86.612 0 14.896 0 15.302 0 14.924 0 14 0 14 0 14 0 1 0 1 0 1 3526.6 12978 1051 12509 30319 35311 35311 1 LLSWSDNWR Unmodified 1175.5724 0.57235688 3246 Q9JM14 Nt5c 5'(3')-deoxyribonucleotidase, cytosolic type yes yes 0 0 0 0 11.5 1.5 1 1 74.937 74.937 2 0.021539 22642 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.673 29.876 142.65 49.618 149.01 45.254 153.2 138.47 134 51 143 46 153 134 2 1 2 1 2 2 32628 12979 3246 12510 30320;30321 35312;35313 35312 2 LLSYASYCIEHGDLELAAK Unmodified 2152.0511 0.051055878 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 9 0 1 80.168 80.168 4 0.00033755 27519 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.993 28.793 0 39.368 0 0 47.137 28.503 0 37 0 0 46 28 0 1 0 0 1 1 2510.5 12980 2517 12511 30322 35314 35314 1 LLSYVDDEAFIR Unmodified 1439.7296 0.72964538 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6.5 0.5 1 1 81.54 81.54 3 0.0002156 29353 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.531 48.68 0 0 20.558 0 47.504 17.832 0 0 19 0 46 18 0 0 1 0 2 2 4035.1 12981 3331 12512 30323;30324 35315;35316 35316 2 LLTAHTAAALSK Unmodified 1195.6925 0.69247202 1960 Q3U422 Ndufv3 yes yes 0 0 0 0 10 0 1 53.093 53.093 3 0.011876 12944 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.378 24.146 0 136.29 121.66 0 151.63 153.44 0 130 120 0 150 148 0 1 1 0 1 1 3633.3 12982 1960 12513 30325 35317 35317 1 LLTALNECTEWGQIFILDCLSNYNPK Unmodified 3111.5045 0.50454318 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 11 2 1 1 109.57 109.57 4 4.0993E-20 37474 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.031 62.384 0 14.448 0 0 6 9.594 0 14 0 0 6 9 0 2 0 0 1 1 2039.9 12983 3123 12514 30326;30327 35318;35319;35320 35318 3 LLTAQEQPVYI Unmodified 1273.6918 0.69180331 624 B2RUJ5 Apba1 Amyloid beta A4 precursor protein-binding family A member 1 yes yes 0 0 0 0 13 0 1 81.887 81.887 2 0.021854 31776 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.416 13.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12984 624 12515 30328 35321 35321 1 LLTDALELTLGVAPK Unmodified 1552.9076 0.90760975 1926 Q3TIR3 Ric8a Synembryn-A yes yes 0 0 0 0 9.5 0.5 1 1 103.27 103.27 3 1.0643E-05 33289 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.262 53.729 30.044 0 0 39.747 36.876 0 28 0 0 37 37 0 1 0 0 1 1 0 1764 12985 1926 12516 30329;30330 35322;35323 35323 2 LLTDDGNK Unmodified 874.43961 0.43961137 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 6 0 1 50.933 50.933 2 0.061464 15853 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.478 29.741 108.81 0 106.59 72.47 109.48 96.014 102 0 102 74 111 93 1 0 1 1 1 1 5014.2 12986 2697 12517 30331 35324 35324 1 LLTELETPSWWPFGSK Unmodified 1889.9564 0.95635086 2670 Q8R570;B2FDF6;I7HFU4 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 10 0 1 101.04 101.04 4 1.6052E-05 32766 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.529 50.005 6.3827 0 9.2923 9.2832 0 13.858 6 0 9 9 0 13 1 0 1 1 0 1 926.25 12987 2670 12518 30332 35325 35325 1 LLTETEDWLYEEGEDQAK Unmodified 2167.9797 0.97972465 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 3.67 0.471 1 2 86.953 86.953 3;4 4.1242E-05 33049 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.275 23.036 12.848 36.374 0 19.345 20.646 27.472 12 35 0 18 21 26 1 3 0 2 3 2 16312 12988 2137 12519 30333;30334;30335 35326;35327;35328;35329 35328 4 LLTFASQLK Unmodified 1019.6015 0.60153174 2019 Q6P6P5;Q3V0N8;Q924N4;A2AGJ9;F8WIJ0;Q9JIS8 Slc12a6;Slc12a4 Solute carrier family 12 member 6;Solute carrier family 12 member 4 yes no 0 0 0 0 6.5 5.5 1 1 76.888 76.888 2;3 0.0055776 26877 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.823 28.745 0 0 0 39.747 36.876 0 0 0 0 37 37 0 0 0 0 1 1 0 4561.7 12989 2019 12520 30336;30337 35330;35331 35330 2 LLTFMGMAVENK Unmodified 1352.6832 0.68322924 2833 Q99JX4;A2A702 Eif3m Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 0 12 0 1 87.849 87.849 2 0.00068334 24859 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.417 54.675 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 1324.9 12990 2833 12521 30338 35332 35332 1 LLTFNPTYCVLK Unmodified 1467.7796 0.77957246 904 E9Q442;G3X9Y5;E9Q735 Ube4a Ubiquitin conjugation factor E4 A yes no 0 0 0 0 11.5 0.5 1 1 82.36 82.36 2;3 4.2493E-09 22823 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.79 79.061 108.46 0 165.52 109.72 92.238 0 102 0 158 111 93 0 1 0 1 1 1 0 3070.1 12991 904 12522 30339;30340 35333;35334 35334 2 LLTGQETPLYI Unmodified 1246.6809 0.68090428 229 P98084;A0A0U1RPM0;A0A0U1RPS9 Apba2 Amyloid beta A4 precursor protein-binding family A member 2 yes no 0 0 0 0 7 0 1 89.437 89.437 2 0.029919 33031 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.066 13.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12992 229 12523 30341 35335 35335 1 LLTGSSYK Unmodified 867.47018 0.47018322 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 0 11.7 1.25 1 1 1 54.268 54.268 2;3 0.0051692 13439 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.486 28.604 276.85 82.342 288.31 162.45 237.57 308.76 260 83 279 157 241 296 3 1 3 2 2 3 28678 12993 2050 12524 30342;30343;30344 35336;35337;35338 35336 3 LLTMGSFK Unmodified 895.48372 0.48372479 3378 Q9Z1L5;A0A286YCK6;A0A286YCF6 Cacna2d3 Voltage-dependent calcium channel subunit alpha-2/delta-3;Voltage-dependent calcium channel subunit alpha-2-3;Voltage-dependent calcium channel subunit delta-3 yes no 0 0 0 0 11.5 0.5 1 1 71.179 71.179 2 0.011853 20565 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.548 26.998 68.894 72.73 81.356 83.936 102.84 0 65 74 83 83 102 0 1 1 1 1 1 0 12618 12994 3378 12525 30345;30346 35339;35340 35339 2 LLTNLGLGEIK Unmodified 1169.702 0.70197407 2221 Q6P5F6;A0A087WRC8;A0A087WQF7 Slc39a10 Zinc transporter ZIP10 yes no 0 0 0 0 9 0 1 80.645 80.645 3 0.0010649 27694 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.262 39.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12995 2221 12526 30347 35341 35341 1 LLTPTHSFLAR Unmodified 1254.7085 0.70845643 706 D3YWN7;E9QMU3;O88735 Map7 Ensconsin yes no 0 0 0 0 11 0 1 56.96 56.96 3 0.02805 14346 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.061 4.8696 0 98.952 0 0 38.702 0 0 93 0 0 37 0 0 1 0 0 1 0 10984 12996 706 12527 30348 35342 35342 1 LLTQHENIKNEIDNYEEDYQK Unmodified 2635.2402 0.24018987 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 8 3.56 1 1 1 66.323 66.323 4 9.274E-39 23383 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.9 125.82 177.92 127.07 105.22 129.4 136.32 116.64 167 130 102 121 139 111 3 2 2 2 2 1 38245 12997 2148 12528 30349;30350;30351 35343;35344;35345 35345 3 LLTQYVLSLAK Unmodified 1247.7489 0.74892426 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 7 6 1 1 89.367 89.367 2;3 0.023986 35187 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.04 33.512 29.904 27.776 59.719 49.514 73.722 67.186 28 28 56 47 74 65 1 1 2 2 2 2 3703.3 12998 3249 12529 30352;30353 35346;35347;35348 35348 3 LLTSGYLQR Unmodified 1049.5869 0.58694431 2293 Q7TQI3;D3YWF6 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 11.2 1.6 1 1 1 2 59.25 59.25 2;3 2.1404E-05 15717 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 147.04 90.491 364.15 388 466.57 753.58 470.58 349.25 342 390 455 723 480 333 3 3 2 5 3 3 322360 12999 2293 12530 30354;30355;30356;30357;30358 35349;35350;35351;35352;35353;35354 35350 6 LLTSITSK Unmodified 861.51713 0.51713341 2596 Q8K298;A0A1L1SS34 Anln Actin-binding protein anillin yes no 0 0 0 0 11 0 1 63.608 63.608 2 0.015772 17223 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.005 38.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6246.1 13000 2596 12531 30359 35355 35355 1 LLTSLLK Unmodified 786.52149 0.52149051 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 12 0 1 77.534 77.534 2 0.027165 20880 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.626 17.211 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 16972 13001 3387 12532 30360 35356 35356 1 LLTSPDVSYDEAR Unmodified 1464.7096 0.70963822 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 5 0 1 60.933 60.933 2 0.015597 21160 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.841 35.17 20.387 0 0 30.604 0 29.848 19 0 0 28 0 28 1 0 0 1 0 1 2543.4 13002 893 12533 30361 35357 35357 1 LLTSYGFIQCSER Unmodified 1572.7606 0.76062794 2566 Q8JZN2;Q91W50 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 10 0 1 71.828 71.828 2 0.00036842 21410 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.839 75.975 20.387 0 0 0 48.116 0 19 0 0 0 46 0 1 0 0 0 1 0 3005.8 13003 2566 12534 30362 35358 35358 1 LLTTIGK Unmodified 744.47454 0.47454032 133;119 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3;A2AMI7;A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6;A0A0J9YVC1;A0A0J9YUC1;E9Q770 Eif4g3;Eif4g1 Eukaryotic translation initiation factor 4 gamma 3;Eukaryotic translation initiation factor 4 gamma 1 no no 0 0 0 0 10.5 0.5 1 1 62.98 62.98 2 0.012754 16950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.17 53.516 51.919 51.776 66.693 217.9 68.219 70.541 49 53 68 216 71 68 1 1 1 2 1 1 29738 13004 133;119 12535 30363;30364 35359;35360 35360 2 LLTVFAYGTYADYLAEAR Unmodified 2036.0255 0.025493054 2997 Q9CZ04;D3Z440;D3YVI6 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 10.7 0.471 1 2 97.166 97.166 2;3 0.001791 31904 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.208 35.032 9.657 0 30.296 0 14.145 24.114 9 0 28 0 14 23 1 0 1 0 1 2 7825.3 13005 2997 12536 30365;30366;30367 35361;35362;35363 35362 3 LLTYNAAR Unmodified 920.50797 0.50796571 3127 Q9DBL1;E9Q5L3 Acadsb Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 10 0 1 50.743 50.743 2 0.039289 11979 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.993 36.038 157.92 66.54 92.604 72.581 147.88 104.51 148 74 93 74 148 102 1 1 1 1 1 1 9888.6 13006 3127 12537 30368 35364 35364 1 LLVAESCGALAPYLPK Unmodified 1700.9171 0.91712858 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 9 0 1 83.412 83.412 3 0.00020057 28753 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.472 38.743 20.118 24.839 24.175 28.814 18.55 0 19 25 25 28 19 0 1 1 1 1 1 0 8983.7 13007 35 12538 30369 35365 35365 1 LLVALGTLISDDSNAIQLAK Unmodified 2054.1623 0.16232089 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 11.5 0.5 2 2 106.98 106.98 3;4 3.0146E-11 29451 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.9 80.229 0 16.392 37.806 60.941 21.771 34.227 0 16 37 61 23 33 0 1 1 3 1 2 7054.2 13008 1466 12539 30370;30371;30372;30373 35366;35367;35368;35369 35368 4 LLVEAEQAK Unmodified 999.56006 0.56006086 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 7.4 3.01 2 1 1 1 59.428 59.428 2;3 0.00080088 20640 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.71 63.719 285.45 636.56 550.16 460.39 498.64 550.49 269 625 553 453 515 526 3 5 4 3 5 3 41522 13009 3258 12540 30374;30375;30376;30377;30378 35370;35371;35372;35373;35374 35371 5 LLVESDINSIR Unmodified 1257.6929 0.69286595 649 CON__O76011;CON__Q8IUT8 yes no 0 0 0 0 7 0 1 66.713 66.713 2 0.019693 22381 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.314 28.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 13010 649 12541 30379 35375 35375 1 LLVMTSTSLQK Unmodified 1219.6846 0.68460945 3239 Q9JKY5;A0A0G2JFU3 Hip1r Huntingtin-interacting protein 1-related protein yes no 0 0 0 0 1 0 1 70.657 70.657 3 0.0021527 23952 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.064 25.686 39.701 0 0 29.94 35.311 58.688 37 0 0 28 37 56 1 0 0 1 1 1 2695.2 13011 3239 12542 30380 35376 35376 1 LLVPYLIEAVR Unmodified 1284.7806 0.78055874 2127 Q61425 Hadh Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 0 7.6 5.43 2 1 1 1 91.784 91.784 2;3 4.7794E-13 25830 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 148.52 81.841 88.174 23.299 158.01 55.009 76.359 96.52 83 25 150 54 76 92 5 2 6 3 3 5 47420 13012 2127 12543 30381;30382;30383;30384;30385 35377;35378;35379;35380;35381;35382;35383;35384 35382 8 LLVQNILK Unmodified 939.6117 0.6117025 954 Q8CHT1;E9QK62;F6SWQ9 Ngef Ephexin-1 yes no 0 0 0 0 8 4.97 1 1 1 74.184 74.184 2;3 2.126E-06 19385 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 164.53 82.892 0 78.683 66.822 346.87 153.5 271.71 0 75 65 320 168 259 0 2 1 2 2 3 27977 13013 954 12544 30386;30387;30388 35385;35386;35387 35387 3 LLVQNILK Deamidation (N) 940.59572 0.59571809 954 Q8CHT1;E9QK62;F6SWQ9 Ngef Ephexin-1 yes no 0 1 0 0 1 0 1 74.333 74.333 2 0.04928 25479 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.986 28.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13014 954 12544 30389 35388 35388 255 1 LLVSAGSLYPAIAR Unmodified 1429.8293 0.82929985 1298 P01029 C4b Complement C4-B;Complement C4 beta chain;Complement C4 alpha chain;C4a anaphylatoxin;Complement C4 gamma chain yes yes 0 0 0 0 6.5 5.5 1 1 77.885 77.885 2;3 3.1036E-05 20967 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.83 64.383 0 14.896 0 24.424 37.991 8.5099 0 14 0 23 37 9 0 1 0 2 1 1 2621.3 13015 1298 12545 30390;30391 35389;35390 35390 2 LLVSASQDGK Unmodified 1016.5502 0.55022446 1751;1750;1485 P29387;P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7;Q61011 Gnb4;Gnb2;Gnb1;Gnb3 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 no no 0 0 0 0 9.8 1.72 1 1 3 2 1 1 1 54.852 54.852 2;3 2.0627E-28 16225 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 190.88 133.29 1152 966.17 1576 859.13 1452.2 1103.5 1084 993 1548 858 1447 1059 8 7 10 8 9 8 776880 13016 1485;1751;1750 12546 30392;30393;30394;30395;30396;30397;30398;30399;30400;30401 35391;35392;35393;35394;35395;35396;35397;35398;35399;35400;35401;35402;35403 35394 13 LLVSMCQGNR Unmodified 1176.5743 0.57434749 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 10 0 1 56.765 56.765 2 0.030907 14542 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.432 33.691 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13017 372 12547 30402 35404 35404 1 LLVSSEDYGR Unmodified 1137.5666 0.5666028 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 55.608 55.608 2 1.9842E-15 17301 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 175.51 135.42 481.96 463.18 454.42 403.69 482.07 403.87 453 473 455 398 482 389 5 7 5 6 5 6 147800 13018 551 12548 30403;30404;30405;30406;30407 35405;35406;35407;35408;35409;35410;35411 35409 7 LLVSVLEQGLSPK Unmodified 1381.8181 0.81806646 1926 Q3TIR3;A0A1B0GS30 Ric8a Synembryn-A yes no 0 0 0 0 11.5 0.5 1 1 90.148 90.148 3 0.0010583 28850 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.11 35.893 29.597 57.142 26.718 19 0 29.848 28 56 28 19 0 28 1 1 1 1 0 1 9019.1 13019 1926 12549 30408;30409 35412;35413;35414 35412 3 LLVVDPETDER Unmodified 1284.6561 0.65614609 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 0 4.5 0.5 1 1 64.086 64.086 2 5.4043E-08 22519 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.83 60.857 26.423 20.79 50.001 36.73 38.836 38.334 25 22 49 37 40 37 1 1 1 1 1 1 17324 13020 1815 12550 30410;30411 35415;35416 35416 2 LLVVQNFTSNR Unmodified 1289.7092 0.70918471 3414 yes no 0 0 0 0 6.5 5.5 1 1 74.958 74.958 2 0.0024211 25827 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.165 44.81 0 9.576 0 30.275 17.475 29.349 0 9 0 28 19 28 0 1 0 1 1 1 4672.5 + 13021 3414 12551 30412;30413 35417;35418 35417 2 LLVVTDPR Unmodified 911.54402 0.54401687 1374 P14206;A0A1L1SRW0 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 8.5 0.5 1 1 59.371 59.371 2 0.0069092 17498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.84 53.371 129.1 65.13 67.976 84.753 101.81 28.824 121 65 65 83 102 28 2 1 1 2 2 1 54078 13022 1374 12552 30414;30415 35419;35420;35421 35421 3 LLVVYPWTQR Unmodified 1273.7183 0.71829284 562;1299 A8DUK4;P02088;E9Q223;CON__Q3SX09;CON__P02070;P02104;P02089 Hbbt1;Hbb-b1;Hbb-bs;Hbb-y;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit epsilon-Y2;Hemoglobin subunit beta-2 no no 0 0 0 0 6.67 5.68 3 2 1 80.209 80.209 2;3 1.7616E-109 28177 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 244.76 169.02 5857.8 6279.6 5634.9 5487.9 9745.6 6375.5 5519 6342 5695 5431 9752 6206 17 14 17 15 15 18 2769400 13023 562;1299 12553 30416;30417;30418;30419;30420;30421 35422;35423;35424;35425;35426;35427;35428;35429;35430;35431;35432;35433;35434;35435;35436;35437;35438;35439;35440;35441;35442 35427 21 LLWANKPDK Unmodified 1083.6077 0.60767975 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 1 12 0 1 59.193 59.193 3 0.02774 13802 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.032 26.64 169.53 0 0 0 199.56 250.15 158 0 0 0 199 240 1 0 0 0 1 1 14635 13024 2207 12554 30422 35443 35443 1 LLWEQELYNNFVYNSPR Unmodified 2184.064 0.064003825 2770 Q91YD9;Q9CXQ9 Wasl Neural Wiskott-Aldrich syndrome protein yes no 0 0 0 0 10.5 2.5 1 1 91.707 91.707 3 0.0018592 36397 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.608 17.028 29.622 26.992 48.003 0 8.9102 14.67 28 28 46 0 9 14 2 2 2 0 1 1 4333.3 13025 2770 12555 30423;30424 35444;35445 35445 2 LLWFVTESK Unmodified 1121.6121 0.61209643 614 B2RQ71;E9PWR4;B7ZMZ7 Dip2c yes no 0 0 0 0 11.5 0.5 1 1 87.792 87.792 2 0.00087344 27972 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.84 73.82 68.963 27.151 108.39 0 0 0 65 28 102 0 0 0 2 1 2 0 0 0 6266.7 13026 614 12556 30425;30426 35446;35447 35446 2 LLWIDTK Unmodified 887.51165 0.5116541 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 0 10 0 1 76.336 76.336 2 0.04867 23240 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.899 23.729 69.387 0 60.242 0 75.098 67.147 65 0 56 0 74 65 1 0 1 0 1 1 3096.2 13027 3395 12557 30427 35448 35448 1 LLWTTSR Unmodified 875.4865 0.48650199 1878;1879 Q02248;E9Q6A9;Q02257 Ctnnb1;Jup Catenin beta-1;Junction plakoglobin no no 0 0 0 0 12 0 1 61.122 61.122 2 0.0022698 14597 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.63 37.912 176.77 230.33 211.6 263.31 265 185.38 167 231 220 257 271 181 1 1 1 1 1 1 34174 13028 1878;1879 12558 30428 35449 35449 1 LLYDIWGDTVNIASR Unmodified 1734.8941 0.89408495 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 0 0 0 9 0 1 96.615 96.615 3 0.0023664 34657 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.155 29.492 20.244 28.427 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 0 2683.3 13029 1603 12559 30429 35450 35450 1 LLYDLADQLHAAVGASR Unmodified 1811.953 0.95299681 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 86.516 86.516 3 0.00015572 30206 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.9 43.234 0 49.531 28.537 20.411 18.936 0 0 47 28 19 19 0 0 2 1 1 1 0 27753 13030 2860 12560 30430;30431 35451;35452 35451 2 LLYLLESTDDPVITEK Unmodified 1847.9768 0.97681153 3029 Q9D0L7;D3Z5T2 Armc10 Armadillo repeat-containing protein 10 yes no 0 0 0 0 8 0 1 94.086 94.086 3 1.5115E-05 34097 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.566 79.185 0 14.896 0 0 13.962 19.856 0 14 0 0 14 19 0 1 0 0 1 1 3112.2 13031 3029 12561 30432 35453 35453 1 LLYNNVSNFGR Deamidation (N) 1296.6463 0.64625011 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 8.8 2.14 1 3 1 66.803 66.803 2;3 6.7448E-25 24218 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 185.33 148.88 226.65 219.8 305.12 261.3 374.68 314.44 213 222 306 259 380 305 3 3 4 3 4 4 54720 13032 2185 12562 30433;30434;30435;30436;30437 35454;35455;35456;35457;35458 35458 865;866 5 LLYNNVSNFGR Unmodified 1295.6622 0.66223452 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 11 1.41 1 1 1 1 1 63.697 63.697 2 1.2723E-114 19741 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 249.24 166.07 413.33 398.49 1241.6 552.13 472 846.66 389 408 1192 549 486 805 3 3 7 5 5 4 901140 13033 2185 12562 30438;30439;30440;30441;30442 35459;35460;35461;35462;35463;35464;35465;35466 35459 8 LLYPPETGLFLVR Unmodified 1516.8654 0.865351 291 A0A1L1SR46;A0A1L1STA1;P41241 Csk Tyrosine-protein kinase CSK yes no 0 0 0 0 10 0 1 87.931 87.931 2 0.00038268 28359 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.693 37.692 9.612 8.9279 0 16.395 0 9.594 9 9 0 15 0 9 1 1 0 1 0 1 2101.1 13034 291 12563 30443 35467 35467 1 LLYTALK Unmodified 820.50584 0.50584045 371 Q921Q7;A0A2C9F2A2;A0A286YCR5 Rin1 Ras and Rab interactor 1 yes no 0 0 0 0 12 0 1 68.562 68.562 2 0.036239 17252 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.297 47.219 74.037 0 0 0 0 78.884 69 0 0 0 0 74 1 0 0 0 0 1 3665 13035 371 12564 30444 35468 35468 1 LMCGGVEIR Unmodified 1033.5049 0.50487094 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 7 0 1 55.621 55.621 2 0.042223 17082 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.598 31.704 78.82 42.598 61.698 127.48 0 59.696 74 46 65 120 0 56 1 1 1 1 0 1 2863.7 13036 927 12565 30445 35469 35469 1 LMCKPIFSK Unmodified 1122.593 0.59295767 3359 Q9Z0N1;Q9Z0N2;A2AAW9 Eif2s3x;Eif2s3y Eukaryotic translation initiation factor 2 subunit 3, X-linked;Eukaryotic translation initiation factor 2 subunit 3, Y-linked yes no 0 0 0 1 7 0 1 62.051 62.051 3 0.018711 20217 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.398 12.277 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13037 3359 12566 30446 35470 35470 1 LMCPQEIVDYIADK Unmodified 1693.8055 0.80552922 1010 F6ZFT1;F8WJ64;Q9CR21 Ndufab1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 0 0 10.5 2.5 1 1 92.114 92.114 3 0.0069876 36639 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.723 20.93 30.044 0 0 40.441 0 29.848 28 0 0 37 0 28 1 0 0 1 0 1 3478.8 13038 1010 12567 30447;30448 35471;35472 35472 2 LMCPQEIVDYIADKK Unmodified 1821.9005 0.90049224 1010 F6ZFT1;F8WJ64;Q9CR21 Ndufab1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 0 1 10.3 1.89 2 1 85.854 85.854 3;4 2.2751E-05 33553 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.789 63.098 0 131.94 37 66.777 100.7 34.744 0 124 37 62 99 34 0 3 1 2 2 1 27522 13039 1010 12568 30449;30450;30451 35473;35474;35475;35476 35476 4 LMDAVMLQLTR Unmodified 1289.6836 0.68356359 1916 Q3TDK6 Rogdi Protein rogdi homolog yes yes 0 0 0 0 11 0 1 85.924 85.924 2 0.016744 27159 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.836 22.736 0 0 34.624 0 24.058 0 0 0 32 0 23 0 0 0 1 0 1 0 2882.8 13040 1916 12569 30452 35477 35477 1 LMDEVAGIVAAR Unmodified 1243.6595 0.65945733 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 8.67 3.09 1 1 1 78.248 78.248 2;3 2.1222E-06 28644 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.35 72.467 109.23 7.5527 30.048 29.351 95.93 0 102 9 28 28 93 0 3 1 1 1 2 0 21790 13041 852 12570 30453;30454;30455 35478;35479;35480 35478 3 LMDGSEILSLLESAR Unmodified 1632.8393 0.83927219 3345;369 A0A286YDY4;A0A286YCT6;Q9WV92 Epb41l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 9.33 2.62 1 1 1 99.286 99.286 2;3 2.4247E-05 36271 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.789 60.609 20.268 0 34.071 8.6408 0 9.594 19 0 33 9 0 9 1 0 2 1 0 1 8544.8 13042 369;3345 12571 30456;30457;30458 35481;35482;35483 35481 3 LMDLLADSR Unmodified 1032.5274 0.52738052 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 8 0 1 75.703 75.703 2 0.044902 26000 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.032 27.871 49.358 0 0 60.887 17.077 0 46 0 0 56 19 0 1 0 0 1 1 0 2771.6 13043 3387 12572 30459 35484 35484 1 LMDLLEEGLKR Unmodified 1315.717 0.71697221 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 9 0 1 80.614 80.614 3 0.041034 27725 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.73 20.023 30.044 0 0 29.737 46.1 18.939 28 0 0 28 46 19 1 0 0 1 1 1 2791.3 13044 3025 12573 30460 35485 35485 1 LMDVGLIAIR Unmodified 1099.6424 0.6423507 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 10.7 1.7 1 1 1 80.412 80.412 2 0.00016886 25192 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.442 30.527 148.09 107.74 86.219 48.92 154.66 213.05 139 112 83 46 157 204 2 2 1 1 2 2 44716 13045 2092 12574 30461;30462;30463 35486;35487;35488 35487 3 LMDYSLLVGIHDVER Unmodified 1758.8975 0.89745577 1244 O70172;F6RJE8 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes no 0 0 0 0 8 0 1 78.192 78.192 3 8.064E-05 27211 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.519 66.856 39.701 0 0 0 38.702 0 37 0 0 0 37 0 1 0 0 0 1 0 2998.2 13046 1244 12575 30464 35489 35489 1 LMELHGEGGSSGK Unmodified 1300.6082 0.60815004 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 6 0 1 46.799 46.799 3 0.002954 13831 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.939 17.051 68.932 63.122 83.165 56.251 0 59.696 65 65 83 56 0 56 1 1 1 1 0 1 3231 13047 1844 12576 30465 35490 35490 1 LMEPIYLVEIQCPEQVVGGIYGVLNR Unmodified 2988.5453 0.54528578 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 11 2 1 1 106.2 106.2 3;4 4.9224E-05 43309 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.403 32.093 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 3242.2 13048 1652 12577 30466;30467 35491;35492 35492 2 LMESHGFEEYMK Unmodified 1499.6425 0.64248664 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 6 0 1 62.129 62.129 4 0.04111 21077 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.144 24.784 0 38.738 37.71 0 67.99 0 0 37 37 0 65 0 0 1 1 0 1 0 1763.9 13049 1887 12578 30468 35493 35493 1 LMEVEQDQR Unmodified 1146.5339 0.53392246 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 4.33 0.471 2 1 48.343 48.343 2;3 0.0025511 15466 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.614 47.764 39.701 28.835 57.26 65.523 112.15 58.12 37 28 56 65 112 56 1 1 1 2 2 1 14479 13050 1986 12579 30469;30470;30471 35494;35495;35496 35494 3 LMGDLGQLTFLEWDAR Unmodified 1863.9189 0.91891949 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 8 0 1 98.419 98.419 3 1.5564E-05 35299 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.344 81.427 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 1181.6 13051 141 12580 30472 35497 35497 1 LMGGMEIK 2 Oxidation (M) 909.42997 0.42997466 417 A0ZV96;Q8BHW2 Oscp1 Protein OSCP1 yes no 0 0 2 0 10 0 1 67.749 67.749 2 0.04367 19456 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.572 11.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13052 417 12581 30473 35498 35498 20;21 1 LMGLEALK Unmodified 873.49937 0.49937486 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 9.5 0.5 1 1 72.555 72.555 2 0.0019795 21773 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.34 59.309 238.01 147.58 460.13 180.92 0 394.42 224 158 442 176 0 370 1 1 2 1 0 2 34196 13053 1825 12582 30474;30475 35499;35500 35500 2 LMHQAALLGQALK Unmodified 1392.7911 0.7911402 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 11 0 1 66.498 66.498 3 0.0089733 18512 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.378 27.753 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 6606.2 13054 3253 12583 30476 35501 35501 1 LMIEMDGTENK Unmodified 1279.5788 0.57882375 1398 P17182;Q6PHC1;B0QZL1;B1ARR7 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 7.75 3.11 1 1 1 1 65.804 65.804 2;3 4.695E-11 23557 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.11 87.168 127.85 233.08 244.19 43.594 206.83 132.45 121 231 241 46 204 129 2 3 3 1 3 2 30941 13055 1398 12584 30477;30478;30479;30480 35502;35503;35504;35505 35502 4 LMITDAAR Unmodified 889.46914 0.46913736 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 0 1 53.213 53.213 2 0.044487 15384 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.88 35.139 0 135.6 162.82 0 190.65 235.48 0 130 158 0 190 226 0 1 1 0 1 1 9304.5 13056 1382 12585 30481 35506 35506 1 LMLAVVK Unmodified 772.48808 0.48808189 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 6.5 5.5 1 1 70.612 70.612 2 0.0062925 17899 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 142.42 63.389 329.73 29.588 462.5 256.8 347.87 400.48 310 37 440 261 357 385 3 1 2 2 3 3 36886 13057 1050;1380 12586 30482;30483 35507;35508;35509 35509 3 LMLDTWNESIFSNIK Unmodified 1809.8971 0.89712142 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 9 0 1 93.762 93.762 3 0.0027142 33440 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.482 31.117 0 39.987 26.604 29.018 0 0 0 38 28 28 0 0 0 1 1 1 0 0 842.93 13058 823 12587 30484 35510 35510 1 LMLLDLSSNK Deamidation (N) 1133.6002 0.60021112 2344 Q80ZD8 Amigo1 Amphoterin-induced protein 1 yes yes 0 1 0 0 11 0 1 79.357 79.357 3 0.035481 24329 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.368 23.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13059 2344 12588 30485 35511 35511 917 1 LMMNLLR Unmodified 889.48776 0.48776432 1888;3109 Q9DB16;Q06138 Cab39l;Cab39 Calcium-binding protein 39-like;Calcium-binding protein 39 no no 0 0 0 0 12 0 1 72.242 72.242 2 0.036486 18592 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.1 38.1 0 0 49.772 0 37.054 47.979 0 0 46 0 37 46 0 0 1 0 1 1 8759 13060 3109;1888 12589 30486 35512 35512 1 LMNDMTAVALNYGIYK Unmodified 1815.8899 0.88992755 2137 Q61699;E9Q0U7;D3Z3I9;A0A0J9YTZ7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 10 0.816 1 1 1 89.551 89.551 3 0.000103 31541 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.173 49.341 0 28 19.685 19.594 0 0 0 28 19 19 0 0 0 1 1 1 0 0 5500.5 13061 2137 12590 30487;30488;30489 35513;35514;35515 35513 3 LMNESLMLVTALNPHIGYDK Unmodified 2258.1439 0.14391041 1857 P97807;H3BKG7 Fh;Fh1 Fumarate hydratase, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 88.571 88.571 3 6.0202E-11 31234 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.586 63.033 28.558 19.571 0 9.4714 19.439 0 28 19 0 9 19 0 2 1 0 1 1 0 4378.2 13062 1857 12591 30490;30491 35516;35517 35516 2 LMNETTAVALAYGIYK Unmodified 1756.907 0.90695782 1957;1581 Q3U2G2;Q61316;P48722;E0CY23;A0A0N4SVU2 Hspa4;Hspa4l Heat shock 70 kDa protein 4;Heat shock 70 kDa protein 4L no no 0 0 0 0 10.8 1.48 1 1 1 1 85.812 85.812 2;3 7.6915E-06 33594 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.391 56.813 68.976 53.532 83.822 54.43 94.778 19 65 56 83 56 93 19 1 1 1 1 1 1 35297 13063 1957;1581 12592 30492;30493;30494;30495 35518;35519;35520;35521 35521 4 LMNPVTK Unmodified 801.44186 0.44185998 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 0 10 1 1 1 54.223 54.223 2 0.027615 15144 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.492 57.7 99.789 86.644 99.756 161.76 68.507 264.55 93 83 97 148 69 250 1 1 1 1 1 2 48795 13064 1944 12593 30496;30497 35522;35523 35522 2 LMQLVDHR Unmodified 1010.5331 0.5331346 1963 Q501J6;Q3U741 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 9 0 1 53.645 53.645 3 0.028996 14845 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.04 27.211 0 48.16 46.882 0 0 49.036 0 46 46 0 0 46 0 1 1 0 0 1 2739.3 13065 1963 12594 30498 35524 35524 1 LMSALTQLK Unmodified 1003.5736 0.57360243 528 F6RK07;A2AUX5;A2AUX3;B7ZD29;Q3UHC7;F6QQP6 Dab2ip Disabled homolog 2-interacting protein yes no 0 0 0 0 11 0 1 75.196 75.196 3 0.0093638 22343 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.434 25.864 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 1265.9 13066 528 12595 30499 35525 35525 1 LMSNALSTVTR Unmodified 1191.6282 0.6281572 2277 Q791T5;D3YXC2 Mtch1 Mitochondrial carrier homolog 1 yes no 0 0 0 0 9 0 1 61.264 61.264 2 0.047358 18472 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.484 7.4569 49.026 65.854 0 0 48.116 0 46 65 0 0 46 0 1 1 0 0 1 0 3853.3 13067 2277 12596 30500 35526 35526 1 LMTDTINEPILLCR Unmodified 1687.8637 0.8637128 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 77.734 77.734 3 0.035398 26991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.392 14.194 0 9.576 0 0 0 78.884 0 9 0 0 0 74 0 1 0 0 0 1 2482.2 13068 2441 12597 30501 35527 35527 1 LMTGAGNILK Unmodified 1016.5689 0.56885141 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 10.5 0.5 1 1 65.172 65.172 2 0.0015465 18265 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.108 38.113 88.193 71.367 85.079 60.031 184.82 172.75 83 74 83 56 185 167 1 1 1 1 2 2 20640 13069 2187 12598 30502;30503 35528;35529 35528 2 LMTGAGNVLR Unmodified 1030.5593 0.55934935 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 9 0 1 56.247 56.247 2 0.0036407 16094 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.688 30.973 0 86.228 124.67 0 116.11 0 0 83 120 0 111 0 0 1 1 0 1 0 17754 13070 2619 12599 30504 35530 35530 1 LMTPTLSFLAR Unmodified 1248.69 0.69002918 477 F6WF36;A2AJI1;A8Y5P4;A2AJI0 Map7d1 MAP7 domain-containing protein 1 yes no 0 0 0 0 12 0 2 80.94 80.94 2;3 0.0011991 22179 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.439 37.324 30.044 9.4378 8.2686 20.274 65.015 86.623 28 9 9 19 65 83 1 1 1 1 1 1 6387.5 13071 477 12600 30505;30506 35531;35532 35531 2 LMVELSK Unmodified 818.45718 0.45717569 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 9 0 1 65.687 65.687 2 0.028698 20586 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.323 8.2065 138.96 0 89.105 0 0 127.92 130 0 83 0 0 120 1 0 1 0 0 1 11288 13072 1825 12601 30507 35533 35533 1 LMVHNWEYLGK Unmodified 1388.6911 0.69109181 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 9 0 1 65.789 65.789 3 0.0036064 20674 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.203 34.324 232.13 141.82 0 231.8 343.95 0 217 148 0 218 339 0 1 1 0 1 1 0 14474 13073 65 12602 30508 35534 35534 1 LMVHTVATFNSIK Unmodified 1459.7857 0.78572048 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.33 5.19 1 2 63.806 63.806 2;3 6.5864E-23 15412 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 139.86 98.669 98.621 63.134 142.87 0 122.13 159.61 93 65 136 0 122 153 3 2 3 0 3 3 74161 13074 551 12603 30509;30510;30511 35535;35536;35537;35538 35538 4 LMVPLLK Unmodified 812.51938 0.51938202 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 1 0 1 78.058 78.058 2 0.03739 27136 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.377 23.867 39.414 56.926 0 39.772 35.555 38.427 37 56 0 37 37 37 1 1 0 1 1 1 8062.9 13075 2422 12604 30512 35539 35539 1 LMVTMLTER Unmodified 1092.5671 0.56713685 1669 P60469 Ppfia3 Liprin-alpha-3 yes yes 0 0 0 0 10 0 1 71.575 71.575 2 0.0090415 21364 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.605 27.849 48.889 25.539 57.201 36.202 44.117 68.031 46 28 56 37 46 65 1 1 1 1 1 1 3569.3 13076 1669 12605 30513 35540 35540 1 LMWAFSMYDLDGNGYISR Deamidation (N) 2138.9441 0.94414797 1832 P84075;E9PV73;A2A7R5 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 1 0 0 10 0 1 100.37 100.37 3 1.7619E-05 32658 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.9 48.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13077 1832 12606 30514 35541 35541 744 1 LNAFGNAFLNR Unmodified 1235.6411 0.64110515 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 12 0 1 71.3 71.3 3 0.00020704 18236 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.171 64.317 0 0 0 49.966 16.57 29.375 0 0 0 46 19 28 0 0 0 1 1 1 5798.6 13078 3271;3353 12607 30515 35542 35542 1 LNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEK Unmodified 4132.1126 0.11255728 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 0 0 0 1 13 0 1 101.51 101.51 5 0.053835 41051 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 17.676 8.533 0 0 80.068 0 29.288 0 0 0 74 0 28 0 0 0 1 0 1 0 1531 13079 3353 12608 30516 35543 35543 1 LNAILGQIVK Unmodified 1067.6703 0.67028001 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 9 4.64 1 1 2 81.822 81.822 2;3 3.1985E-05 22610 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.855 61.499 69.511 0 225.18 110.78 130.89 78.884 65 0 213 111 130 74 2 0 4 2 2 1 77985 13080 2286 12609 30517;30518;30519;30520 35544;35545;35546;35547 35547 4 LNCQVIGASVDSHFCHLAWINTPK Deamidation (N) 2767.321 0.32103992 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 1 0 0 9 0 1 72.017 72.017 4 0.00015414 23600 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.773 27.375 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 5216.1 13081 604 12610 30521 35548 35548 173 1 LNDFASAVR Unmodified 991.50869 0.50869399 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 57.711 57.711 2 0.00094832 17535 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.88 63.526 809.61 989.26 950.45 782.56 1341.5 1222.8 763 996 957 786 1357 1183 3 4 3 3 4 4 235530 13082 1360 12611 30522;30523;30524;30525 35549;35550;35551;35552 35551 4 LNDHFPLVVWQTGSGTQTNMNVNEVISNR Unmodified 3269.5888 0.58875859 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 9 0 1 78.843 78.843 4 1.8425E-09 26847 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.112 48.909 0 0 30.296 0 0 39.442 0 0 28 0 0 37 0 0 1 0 0 1 5594.9 13083 1857 12612 30526 35553 35553 1 LNDNGGLPPVSVDTEESHDSNP Deamidation (N) 2292.9982 0.99822826 3384 Q9Z1S5 Sept3 Neuronal-specific septin-3 yes yes 0 1 0 0 3 0 1 62.72 62.72 3 0.00095862 22674 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.258 36.266 0 5.1624 9.4283 0 0 5.33 0 5 9 0 0 5 0 1 1 0 0 1 2541.9 13084 3384 12613 30527 35554 35554 1139 1 LNDSYSCLGWFSPGQVFVLDEYCAR Unmodified 2982.3317 0.33166419 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 13 0 1 97.986 97.986 3 7.0998E-08 39415 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.359 53.475 5.365 0 0 0 0 14.924 5 0 0 0 0 14 1 0 0 0 0 1 3354 13085 2301;365;912 12614 30528 35555 35555 1 LNDYIFSFDK Unmodified 1260.6027 0.60265396 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 82.317 82.317 3 0.055617 29088 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.238 13.773 49.358 0 0 0 58.576 0 46 0 0 0 56 0 1 0 0 0 1 0 2763.6 13086 3025 12615 30529 35556 35556 1 LNEAKEEFTSGGPLGQK Unmodified 1803.9003 0.90029254 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 1 7.33 0.471 2 1 64.84 64.84 3;4 1.4118E-05 21521 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.685 48.547 69.162 168.78 253.93 175.98 397.76 335.1 65 167 250 167 399 325 1 3 3 2 4 4 21798 13087 1760 12616 30530;30531;30532 35557;35558;35559;35560 35559 4 LNEDMACSVAGITSDANVLTNELR Unmodified 2592.216 0.21596573 3310 Q9R1P0;E9PW69;E9Q0X0 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 9 4 1 1 88.503 88.503 3 1.213E-06 33789 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.262 34.898 5.34 4.9599 0 0 0 5.33 5 5 0 0 0 5 1 1 0 0 0 1 2126.1 13088 3310 12617 30533;30534 35561;35562 35561 2 LNEELER Unmodified 901.45051 0.45051041 2297 Q7TT50;Q8BYW1 Cdc42bpb;Arhgap25 Serine/threonine-protein kinase MRCK beta;Rho GTPase-activating protein 25 yes no 0 0 0 0 2.5 0.5 1 1 41.91 41.91 2 0.037314 12702 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.438 0 88.27 140.25 101.5 0 152.86 56.707 83 139 102 0 148 56 1 2 2 0 2 1 18296 13089 2297 12618 30535;30536 35563;35564 35563 2 LNEGVVEFASYGDLK Unmodified 1639.8094 0.80935227 1187 Q9D8S5;O35326 Srsf5 Serine/arginine-rich splicing factor 5 yes no 0 0 0 0 6 0 1 78.061 78.061 3 0.00021211 28547 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.685 46.384 49.358 0 0 39.601 44.657 47.762 46 0 0 37 46 46 1 0 0 1 1 1 3783.7 13090 1187 12619 30537 35565 35565 1 LNEHFLNTTDFLDTIK Unmodified 1919.9629 0.9628928 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 80.219 80.219 3;4 5.4961E-33 28789 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.2 101.62 67.11 95.587 43.54 46.856 71.917 97.086 65 93 46 46 74 93 2 2 1 1 2 2 18392 13091 1618 12620 30538;30539;30540 35566;35567;35568 35566 3 LNEIEGSLNK Unmodified 1115.5823 0.58225287 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 6 0 1 62.662 62.662 3 0.019971 21355 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.955 17.482 0 38.738 37.71 0 29.288 0 0 37 37 0 28 0 0 1 1 0 1 0 1749.2 13092 1035 12621 30541 35569 35569 1 LNEILYPPLK Unmodified 1198.6962 0.69616041 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 9.5 0.5 1 1 77.927 77.927 2;3 0.0016969 26362 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.247 40.451 39.41 26.695 26.326 48.709 0 0 37 28 28 46 0 0 1 1 1 1 0 0 3116 13093 3373 12622 30542;30543 35570;35571 35570 2 LNELADQDFPLHPR Unmodified 1663.8318 0.83181904 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 5.5 0.5 1 1 65.861 65.861 3 5.147E-08 22694 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.69 78.246 40.42 55.437 85.049 27.547 91.652 96.523 38 56 83 28 92 93 1 2 2 1 2 2 14030 13094 3195 12623 30544;30545 35572;35573 35573 2 LNEQASEEILK Unmodified 1272.6561 0.65614609 537 Q9EQU5;A2BE93;A2BE92 Set Protein SET yes no 0 0 0 0 4 0 1 60.025 60.025 2 0.063479 21105 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.659 11.468 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 2026.2 13095 537 12624 30546 35574 35574 1 LNEQHQLILSK Unmodified 1321.7354 0.73539946 2748 Q91VZ6 Smap1 Stromal membrane-associated protein 1 yes yes 0 0 0 0 8 0 1 52.824 52.824 3 0.00018936 15239 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.959 57.436 0 146.83 63.824 165.77 165.89 242.58 0 139 65 158 167 232 0 2 1 2 1 2 9942.1 13096 2748 12625 30547 35575;35576 35575 2 LNETISTLQQAILK Unmodified 1570.893 0.89302232 47 A2AHC3;A0A0A0MQE5;A2AHC4 Camsap1 Calmodulin-regulated spectrin-associated protein 1 yes no 0 0 0 0 11 0 1 87.388 87.388 3 0.012931 27805 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.958 16.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13097 47 12626 30548 35577 35577 1 LNEVIVNK Unmodified 927.53893 0.53893149 2727;2019 Q91V14;A0A076FR46;Q6P6P5;Q3V0N8;Q924N4 Slc12a5;Slc12a6 Solute carrier family 12 member 5;Solute carrier family 12 member 6 no no 0 0 0 0 9.33 2.62 1 1 1 58.859 58.859 2 0.0079317 18131 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.17 27.702 226 256.47 295.23 105.83 335.88 251.2 213 260 287 111 334 241 2 3 2 1 3 2 38014 13098 2727;2019 12627 30549;30550;30551 35578;35579;35580 35579 3 LNFANPPVK Unmodified 998.55492 0.5549159 1567 P47809;B1ATL6;M0QWR0;M0QWG5 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 0 9.5 0.5 1 1 61.537 61.537 2 0.00086176 18627 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.253 59.696 59.883 40.65 0 70.247 42.405 72.344 56 42 0 65 46 69 1 1 0 1 1 1 6699.3 13099 1567 12628 30552;30553 35581;35582 35581 2 LNFAVASR Unmodified 876.48175 0.48175096 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 9 0 1 55.7 55.7 2 0.0093075 15846 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.623 42.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13100 1470 12629 30554 35583 35583 1 LNFSHGTHEYHAETIK Unmodified 1882.8962 0.89621022 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0;A0A1L1ST52 Pkm Pyruvate kinase PKM yes no 0 0 0 0 7 0.816 1 1 1 46.773 46.773 5 1.1848E-05 14207 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.463 57.762 600.1 413.66 681.89 462.72 445.92 293.28 565 426 675 464 446 279 6 4 6 5 4 3 25741 13101 1609 12630 30555;30556;30557 35584;35585;35586;35587;35588;35589 35584 6 LNGDFAQLNLK Deamidation (N) 1232.6401 0.6401021 727 D3YYT0;P15116 Cdh2 Cadherin-2 yes no 0 1 0 0 6 0 1 75.208 75.208 3 0.064459 27193 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.897 13.912 50.201 45.559 0 30.604 0 0 47 46 0 28 0 0 1 1 0 1 0 0 3798 13102 727 12631 30558 35590 35590 1 LNGTDPEDVIR Deamidation (N) 1228.5935 0.59354583 1923 Q3THE2;Q6ZWQ9;D3YV37;Q9CQ19 Myl12b;Myl12a;Myl9 Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 1 0 0 6 4.97 1 1 1 60.018 60.018 2;3 0.016974 20845 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.569 36.937 88.539 103.21 46.784 146.29 151.35 222.74 83 102 46 139 158 213 2 1 1 3 2 2 25648 13103 1923 12632 30559;30560;30561 35591;35592;35593 35591 781 3 LNGTDPEDVIR Unmodified 1227.6095 0.60953025 1923 Q3THE2;Q6ZWQ9;D3YV37;Q9CQ19 Myl12b;Myl12a;Myl9 Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 yes no 0 0 0 0 4 0 1 56.253 56.253 2 0.026228 19279 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.6 30.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13104 1923 12632 30562 35594 35594 1 LNHNDWIK Unmodified 1038.5247 0.52467841 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 13 0 1 49.58 49.58 3 0.022029 16112 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.378 26.635 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13105 3376 12633 30563 35595 35595 1 LNHQEFK Deamidation (N) 915.44503 0.4450311 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 5 0 1 44.756 44.756 3 0.060316 13434 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.717 19.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13106 551 12634 30564 35596 35596 1 LNHQEFK Unmodified 914.46102 0.46101552 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.5 0.5 1 1 39.869 39.869 2;3 0.0021207 10679 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 121.31 59.35 0 234.95 266.29 322.52 314.17 319.36 0 225 269 315 325 307 0 2 1 2 2 1 34678 13107 551 12634 30565;30566 35597;35598 35597 2 LNIGDLQATK Unmodified 1071.5924 0.59242362 3352 Q9WVJ2;E9Q5I9;E9Q0U1 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 8 0.816 1 1 1 64.573 64.573 3 0.0013744 20634 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.221 41.414 88.21 131 82.119 66.396 45.062 117.04 83 130 83 66 46 111 2 3 2 2 1 3 20935 13108 3352 12635 30567;30568;30569 35599;35600;35601 35600 3 LNIISNLDCVNEVIGIR Unmodified 1941.0353 0.035346234 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 10.3 1.98 2 1 1 1 2 91.097 91.097 2;3 3.6355E-17 32261 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.09 102.41 0 20.216 19.753 30.069 61.44 42.275 0 19 19 30 60 42 0 1 1 2 2 2 27696 13109 2272 12636 30570;30571;30572;30573;30574;30575;30576 35602;35603;35604;35605;35606;35607;35608 35604 7 LNIISNLDCVNEVIGIR Deamidation (N) 1942.0194 0.019361819 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 1 0 0 9 0 1 91.155 91.155 3 0.00069734 32378 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.437 40.494 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 16393 13110 2272 12636 30577 35609 35609 899 1 LNILDTLSK Unmodified 1015.5914 0.59136099 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 77.815 77.815 2 0.0078557 23573 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.098 33.117 384.28 255.3 299.58 295.75 62.732 293.49 361 269 305 288 65 277 4 4 4 4 1 3 28552 13111 2697 12637 30578;30579;30580;30581 35610;35611;35612;35613 35612 4 LNILGGLR Unmodified 854.53379 0.53378653 2193 Q6GQS1;F6X0P2 Slc25a23 Calcium-binding mitochondrial carrier protein SCaMC-3 yes no 0 0 0 0 11.5 0.5 1 1 69.33 69.33 2 0.015359 17515 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.753 21.035 98.761 117.96 182.86 0 102.4 184.69 93 120 176 0 102 176 1 2 2 0 1 2 34507 13112 2193 12638 30582;30583 35614;35615 35615 2 LNIPTTNVFANR Unmodified 1358.7306 0.73064844 2866 Q99LS3 Psph Phosphoserine phosphatase yes yes 0 0 0 0 10 0 1 68.708 68.708 2 0.0027986 19876 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.232 33.471 39.701 0 0 0 0 39.442 37 0 0 0 0 37 1 0 0 0 0 1 6431.2 13113 2866 12639 30584 35616 35616 1 LNIPVNQVNPR Unmodified 1262.7095 0.70951906 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 56.517 56.517 2;3 1.3164E-33 17018 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 195.32 152.46 226.76 316.13 223.48 460.73 190.81 294.6 213 315 232 437 195 278 3 4 3 4 2 3 102580 13114 2699 12640 30585;30586;30587;30588;30589 35617;35618;35619;35620;35621 35617 5 LNIPVSQVNPR Unmodified 1235.6986 0.69862003 106;2253 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7 Atp1a3;Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2 no no 0 0 0 0 9 3.46 1 2 1 1 1 1 1 57.445 57.445 2;3 7.1016E-13 16742 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.84 109.96 1290.2 917.7 1563.6 1087 1168.2 488.56 1214 964 1543 1094 1162 463 5 8 7 5 4 7 979130 13115 106;2253 12641 30590;30591;30592;30593;30594;30595;30596;30597 35622;35623;35624;35625;35626;35627;35628;35629;35630 35625 9 LNITPNSGATGNNAGPK Unmodified 1624.8169 0.81689726 2159 Q62433 Ndrg1 Protein NDRG1 yes yes 0 0 0 0 8 0 1 51.992 51.992 3 1.5103E-06 14801 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.468 58.541 39.284 0 70.132 0 37.384 38.375 37 0 65 0 37 37 1 0 1 0 1 1 4313.8 13116 2159 12642 30598 35631 35631 1 LNITYPMLFK Unmodified 1238.6733 0.67331648 1810 P70362 Ufd1l Ubiquitin fusion degradation protein 1 homolog yes yes 0 0 0 0 12 0 1 84.451 84.451 3 0.0067607 23536 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.347 25.339 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13117 1810 12643 30599 35632 35632 1 LNIVSCPPVTTVLIK Unmodified 1652.9535 0.95351408 229 P98084;A0A0U1RPM0;A0A0U1RPS9 Apba2 Amyloid beta A4 precursor protein-binding family A member 2 yes no 0 0 0 0 11 0 1 81.513 81.513 3 0.00027319 25297 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.673 46.664 0 0 77.108 66.449 0 59.696 0 0 74 65 0 56 0 0 1 1 0 1 6098.1 13118 229 12644 30600 35633 35633 1 LNIWNIADIAEK Unmodified 1398.7507 0.75071518 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 10 2.16 1 1 1 88.709 88.709 2;3 2.7167E-05 31389 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.353 46.626 0 0 41.116 0 0 40.508 0 0 38 0 0 38 0 0 2 0 0 2 4527.3 13119 2790 12645 30601;30602;30603 35634;35635;35636 35635 3 LNLDSIIGR Unmodified 999.57129 0.57129425 1710 P62137 Ppp1ca Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 0 9 0 1 72.942 72.942 2 0.001274 24028 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.01 57.557 157.91 0 149.6 0 0 0 148 0 139 0 0 0 1 0 1 0 0 0 23509 13120 1710 12646 30604 35637 35637 1 LNLEEFQQLYVK Unmodified 1522.8031 0.80314468 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 9 1.91 1 2 2 1 83.346 83.346 2;3;4 3.7393E-20 32375 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 154.35 116.62 265.96 332.35 334.07 334.31 404.25 563.04 250 334 337 326 417 539 5 7 6 6 7 8 148130 13121 1737 12647 30605;30606;30607;30608;30609;30610 35638;35639;35640;35641;35642;35643;35644;35645 35645 8 LNLEHIATSSAVSK Unmodified 1468.7886 0.78855725 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 8.5 0.5 1 1 57.866 57.866 3 1.4695E-08 17632 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.68 80.004 0 108.53 100.63 98.626 262.11 154.88 0 102 93 93 260 148 0 1 1 1 2 1 20004 13122 3174 12648 30611;30612 35646;35647 35646 2 LNLGEEVPVIIHR Unmodified 1487.846 0.84601255 426 A2A5H8;Q3USC7;Q8VE33 Gdap1l1 Ganglioside-induced differentiation-associated protein 1-like 1 yes no 0 0 0 0 7 1 1 1 67.685 67.685 3 0.00201 22156 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.592 28.407 39.098 65.761 45.629 0 84.191 76.482 37 65 46 0 83 74 1 1 1 0 1 1 6878.6 13123 426 12649 30613;30614 35648;35649 35649 2 LNLGTVGFYR Unmodified 1138.6135 0.61349341 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10.5 0.5 1 1 69.627 69.627 2;3 0.0012402 19821 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.067 47.828 0 154.32 188.83 233.24 161.24 196.87 0 148 190 232 168 189 0 1 1 2 1 1 108650 13124 1899 12650 30615;30616 35650;35651 35651 2 LNLNNTVLSK Unmodified 1114.6346 0.63462279 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 9.5 0.5 1 1 64.768 64.768 2 0.0027613 18052 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.507 22.245 20.387 59.584 0 49.46 118.99 154.37 19 56 0 46 121 148 1 1 0 1 2 2 6079.8 13125 2536 12651 30617;30618 35652;35653 35653 2 LNLPINIIGLAPLCENMPSGK Unmodified 2263.2068 0.20684501 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 11.2 0.829 1 1 2 97.244 97.244 3;4 2.3353E-11 31827 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.665 69.002 30.044 0 5 30.079 39.906 14.924 28 0 5 28 40 14 2 0 1 1 2 1 7016.8 13126 2904 12652 30619;30620;30621;30622 35654;35655;35656;35657 35654 4 LNLQEEEGSTR Unmodified 1274.6103 0.61025853 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R208;S4R278 Ank3 Ankyrin-3 yes no 0 0 0 0 4 0 1 46.53 46.53 2 1.2788E-07 14635 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.5 70.07 34.05 31.392 21.525 29.321 0 0 32 32 23 28 0 0 1 1 1 1 0 0 3994.2 13127 3450 12653 30623 35658 35658 1 LNLVVKPLEK Unmodified 1151.7278 0.72779489 1426 P21126 Ubl4a Ubiquitin-like protein 4A yes yes 0 0 0 1 11 0 1 66.885 66.885 3 0.041204 18572 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.452 28.254 0 0 0 118.51 149.36 0 0 0 0 111 148 0 0 0 0 1 1 0 16057 13128 1426 12654 30624 35659 35659 1 LNLYELK Unmodified 891.50657 0.50656873 3311 Q9R1P1 Psmb3 Proteasome subunit beta type-3 yes yes 0 0 0 0 10.7 1.7 1 1 1 69.38 69.38 2 0.011759 22363 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.29 17.302 148.23 150.02 264.61 576.79 515.03 435.16 139 141 259 551 532 422 1 1 2 3 3 3 51671 13129 3311 12655 30625;30626;30627 35660;35661;35662 35660 3 LNNDGLEEAR Unmodified 1129.5364 0.53636531 678 D3YYH3;D3YUE8;D3Z223;P15327 Bpgm Phosphoglycerate mutase;Bisphosphoglycerate mutase yes no 0 0 0 0 3.5 0.5 1 1 44.161 44.161 2 4.7238E-05 13467 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.15 76.59 19.853 37.055 58.269 0 0 39.442 19 37 56 0 0 37 1 1 1 0 0 1 3815.5 13130 678 12656 30628;30629 35663;35664 35664 2 LNNLMASK Unmodified 889.46914 0.46913736 1740 P62812;A0A0U1RPE4;A0A140LJE7 Gabra1 Gamma-aminobutyric acid receptor subunit alpha-1 no no 0 0 0 0 10.5 0.5 1 1 58.389 58.389 2 0.0088982 15406 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.64 46.662 93.601 40.899 161.69 142.29 0 133.25 88 46 158 139 0 125 1 1 2 2 0 1 13340 13131 1740 12657 30630;30631 35665;35666 35665 2 LNNLVLFDK Unmodified 1074.6073 0.6073454 289 A0A1L1SQA8;P62852 Rps25 40S ribosomal protein S25 yes no 0 0 0 0 11 0 1 77.572 77.572 2 0.043406 23453 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.348 13.579 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 2477.2 13132 289 12658 30632 35667 35667 1 LNNTTVLYLK Unmodified 1177.6707 0.67067394 601 B1AWT4;B1AWT2;B1AWT3;Q99K70;Q7TT45 Rragd;Rragc Ras-related GTP-binding protein C;Ras-related GTP-binding protein D yes no 0 0 0 0 10 0 1 68.232 68.232 3 0.00010153 19669 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.658 58.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13133 601 12659 30633 35668 35668 1 LNNVMLNSEGHIK Deamidation (N) 1468.7344 0.73441319 1425 P20444 Prkca Protein kinase C alpha type yes yes 0 1 0 0 6 0 1 61.631 61.631 3 0.028972 20778 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.069 11.891 0 38.61 45.336 47.576 0 49.036 0 37 46 46 0 46 0 1 1 1 0 1 9240.9 13134 1425 12660 30634 35669 35669 525 1 LNPPPAPPAR Unmodified 1028.5767 0.57671398 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 7 0 1 44.154 44.154 3 0.0083263 11822 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.751 22.462 0 39.368 0 49.593 36.424 0 0 37 0 46 37 0 0 1 0 1 1 0 2792.2 13135 885 12661 30635 35670 35670 1 LNQDQLDAVSK Unmodified 1229.6252 0.62518031 2093 Q60865 Caprin1 Caprin-1 yes yes 0 0 0 0 6 0 1 55.943 55.943 2 0.0030036 18231 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.962 42.641 20.139 28.135 17.891 19.701 0 0 19 28 19 19 0 0 1 1 1 1 0 0 2476 13136 2093 12662 30636 35671 35671 1 LNQNLNDVLVSLEK Deamidation (N) 1598.8516 0.85155143 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 1 0 0 6 0 1 78.488 78.488 3 9.0057E-05 28732 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.3 72.671 39.406 0 49.573 0 18.208 48.516 37 0 46 0 19 46 1 0 1 0 1 1 3718.1 13137 1157;2210 12663 30637 35672 35672 306 1 LNQNLNDVLVSLEK Unmodified 1597.8675 0.86753585 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 9.25 2.28 1 1 1 1 84.133 84.133 3 2.7341E-07 30570 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.71 70.202 128.79 169.49 288.47 252.46 191.33 0 121 167 287 250 194 0 2 2 3 3 3 0 68775 13138 1157;2210 12663 30638;30639;30640;30641 35673;35674;35675;35676 35673 4 LNQPGSIVDEGEHSFGR Unmodified 1840.8704 0.8703894 1056 G3UW57;G3XA57 Rab11fip2 Rab11 family-interacting protein 2 yes no 0 0 0 0 4 0 1 56.777 56.777 3 0.00011822 19505 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.438 42.86 0 19.82 23.697 0 28.474 23.705 0 19 23 0 28 23 0 1 1 0 1 1 3482.6 13139 1056 12664 30642 35677 35677 1 LNQPPEDGISSVK Unmodified 1382.7042 0.70415892 234 A0A140LHA2;Q9WVA3;A0A140LIM5;A0A140LI47;A0A140LJ21 Bub3 Mitotic checkpoint protein BUB3 yes no 0 0 0 0 5 0 1 55.597 55.597 3 0.012695 18650 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.3 20.914 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13140 234 12665 30643 35678 35678 1 LNRPLTLSEK Unmodified 1169.6768 0.67682195 2843 Q99KI0;A0A2R8VJW0 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 1 10 2.16 1 1 1 49.511 49.511 3 0.0045079 15841 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.488 29.04 3224.7 2381.3 2967 2035.9 3130.4 3194 3033 2489 2973 2058 3187 3080 4 4 4 3 4 4 301880 13141 2843 12666 30644;30645;30646 35679;35680;35681;35682 35682 4 LNSGLGQLILK Unmodified 1154.7023 0.70230842 940 E9Q9C7;E9Q9C4;E9Q9C0;E9Q9C1;E9Q9C2;E9QK41;Q8K4G5;E9Q9Q7;E9Q9D1;E9Q9D2;E9Q030 Ablim1 Actin-binding LIM protein 1 yes no 0 0 0 0 11 0 1 76.163 76.163 2 0.0050074 22775 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.179 19.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13142 940 12667 30647 35683 35683 1 LNSLCMAWLVDHVYAIR Unmodified 2060.0336 0.033572095 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 11 0 1 88.118 88.118 3 0.00013741 28065 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.096 37.569 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 6027.2 13143 2272 12668 30648 35684 35684 1 LNSLLQPQK Unmodified 1039.6026 0.60259438 2335 Q80XK6 Atg2b Autophagy-related protein 2 homolog B yes yes 0 0 0 0 10 0 1 63.962 63.962 3 0.003858 17712 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.347 33.216 0 29.203 35.21 68.946 0 0 0 28 37 65 0 0 0 1 1 1 0 0 2422.7 13144 2335 12669 30649 35685 35685 1 LNSLMSLVNK Unmodified 1117.6165 0.61652988 3097 Q9D8W5;B1AT36 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 6.5 5.5 1 1 80.606 80.606 3 0.0014045 21839 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.808 39.436 0 19.729 29.112 0 19.874 0 0 19 28 0 19 0 0 1 1 0 1 0 19255 13145 3097 12670 30650;30651 35686;35687;35688 35687 3 LNSYFEQFK Unmodified 1174.5659 0.56587452 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;F6R4N2;A0A0R4J0Q2;E9QAD0;A0A0A6YXS5 Inpp4a yes no 0 0 0 0 10 0 1 72.984 72.984 3 0.051892 21972 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.309 26.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13146 677 12671 30652 35689 35689 1 LNTDPMLLQFFK Unmodified 1465.7639 0.7639224 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 0 10.7 1.7 1 1 1 92.311 92.311 3 0.00014867 32796 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.326 44.268 29.807 46.934 0 46 0 20.254 28 46 0 46 0 19 1 1 0 1 0 1 3560.4 13147 848 12672 30653;30654;30655 35690;35691;35692 35690 3 LNTEGTEK Unmodified 890.43453 0.434526 3318 Q9R1V7 Adam23 Disintegrin and metalloproteinase domain-containing protein 23 yes yes 0 0 0 0 5.5 0.5 1 1 27.519 27.519 3 0.0095062 4846 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.265 10.107 245 172.9 333.98 330.42 202.65 350.26 231 176 333 324 206 334 3 2 3 3 1 3 47182 13148 3318 12673 30656;30657 35693;35694;35695 35695 3 LNTGAWGCCPFAK Unmodified 1480.6591 0.65913975 1482 Q3U9N4;P28798 Grn Granulins;Acrogranin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 0 10 0 1 69.14 69.14 3 0.00090562 20107 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.092 45.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13149 1482 12674 30658 35696 35696 1 LNTIYQNNLTK Unmodified 1320.7038 0.70376498 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 9 0 1 61.359 61.359 2 0.00081535 18537 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.062 19.464 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13150 1566 12675 30659 35697 35697 1 LNTSIQVVLLSATMPTDVLEVTK Unmodified 2471.3557 0.35567732 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 10 0 1 103.59 103.59 4 1.0106E-06 33345 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.578 41.986 6.408 5.9519 0 0 0 12.792 6 6 0 0 0 12 1 1 0 0 0 1 1181 13151 1345 12676 30660 35698;35699 35698 2 LNVAPVSDIIEIK Unmodified 1409.813 0.81298108 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 81.557 81.557 2;3 0.00037165 30170 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.277 29.527 29.737 27.31 28.508 38.872 130.24 84.762 28 28 28 37 129 83 1 1 1 1 2 2 8852.7 13152 2860 12677 30661;30662 35700;35701 35700 2 LNVDFALIHK Unmodified 1168.6604 0.66044361 1064 G3UXL2;Q9D7G0 Prps1l3;Prps1 Ribose-phosphate pyrophosphokinase 1 yes no 0 0 0 0 10.7 1.7 1 1 1 70.118 70.118 3 4.1964E-05 20598 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.734 56.705 278.59 121.07 143.14 213.76 36.338 126.88 261 121 139 204 37 120 5 3 2 5 1 3 69133 13153 1064 12678 30663;30664;30665 35702;35703;35704;35705;35706 35704 5 LNVEFALIHK Unmodified 1182.6761 0.67609367 2967 Q9CS42 Prps2 Ribose-phosphate pyrophosphokinase 2 yes yes 0 0 0 0 10 0 1 70.08 70.08 3 0.0081508 20564 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.225 35.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13154 2967 12679 30666 35707 35707 1 LNVEVDAAPAVDLNQVLNETR Unmodified 2279.1757 0.17573912 663 CON__Q14525 yes yes 0 0 0 0 5 0 1 85 85 3 0.00014193 32411 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.426 32.725 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2151.6 + 13155 663 12680 30667 35708 35708 1 LNVKPLAR Unmodified 909.57599 0.5759857 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 1 6 5 1 1 47.461 47.461 3 0.017493 10413 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.324 24.537 132.67 76.174 0 976.43 160.15 127.61 124 80 0 972 161 124 1 1 0 2 1 1 381870 13156 2622 12681 30668;30669 35709;35710 35710 2 LNVLANVIR Unmodified 1010.6237 0.62366417 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 9.25 4.82 1 1 1 1 73.135 73.135 2 2.5227E-05 18885 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 145.34 68.508 827.31 269.2 478.75 606.66 811.62 930.91 774 269 468 584 828 895 5 3 5 4 4 6 288660 13157 628;2074 12682 30670;30671;30672;30673 35711;35712;35713;35714;35715;35716 35714 6 LNVTSTWNLASPLLSVNVDGTQR Unmodified 2484.2973 0.29725124 2782 Q91ZA3;H3BK61 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes no 0 0 0 0 11 0 1 90.79 90.79 3 2.0531E-08 29152 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.376 52.33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4462 13158 2782 12683 30674 35717 35717 1 LNVWDIGGQR Unmodified 1156.5989 0.59890598 3334 Q9WUL7 Arl3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 0 9 0 1 68.456 68.456 3 0.0022102 21911 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.056 41.901 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13159 3334 12684 30675 35718 35718 1 LNWAFEMYDLDGDGR Unmodified 1800.7777 0.77773456 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 10.5 2.5 1 1 89.331 89.331 2;3 8.8684E-05 32352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.729 53.59 20.076 27.962 28.517 0 0 0 19 28 28 0 0 0 1 1 1 0 0 0 3649 13160 2392 12685 30676;30677 35719;35720;35721 35719 3 LNWAFNLYDLNK Unmodified 1509.7616 0.76161421 971 F6TBA6;Q3YAB1;Q3YAB2;E9QNK8;Q3YAB3;Q9JJ69 Kcnip2 Kv channel-interacting protein 2 yes no 0 0 0 0 11 0 2 88.919 88.919 3 3.0444E-05 28184 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.614 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6780 13161 971 12686 30678;30679 35722;35723 35722 2 LNWAFNMYDLDGDGK Unmodified 1757.7719 0.7719209 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 88.69 88.69 2;3 3.9854E-08 31253 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.64 95.706 90.132 37 0 79.291 169.43 57.275 84 37 0 74 166 56 2 1 0 2 2 1 28206 13162 1737 12687 30680;30681;30682;30683 35724;35725;35726;35727;35728 35724 5 LNWLSVDFNNWK Unmodified 1534.7569 0.75686319 3304 Q9R0Q7 Ptges3 Prostaglandin E synthase 3 yes yes 0 0 0 0 11 0 2 91.712 91.712 2;3 1.236E-05 29379 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.08 61.684 14.893 8.3281 14.573 0 0 0 14 9 14 0 0 0 1 1 1 0 0 0 15241 13163 3304 12688 30684;30685 35729;35730 35729 2 LNWLSVDFNNWK Deamidation (N) 1535.7409 0.74087877 3304 Q9R0Q7 Ptges3 Prostaglandin E synthase 3 yes yes 0 1 0 0 12 0 1 91.737 91.737 3 0.0049745 26141 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.313 33.135 0 0 86.432 75.731 0 59.696 0 0 83 74 0 56 0 0 1 1 0 1 4263.4 13164 3304 12688 30686 35731 35731 1127 1 LNWTGTSK Unmodified 905.46068 0.46068117 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 10.5 0.5 1 1 55.574 55.574 2 0.013394 14099 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.308 41.179 287.91 0 122.27 150.77 280.21 106.36 269 0 120 148 278 102 2 0 1 1 2 1 26177 13165 2420 12689 30687;30688 35732;35733 35732 2 LNYAQWYPIVVFLNPDSK Unmodified 2166.115 0.11497676 640 B9EHJ3;P39447;A0A0U1RPW2 Tjp1 Tight junction protein ZO-1 yes no 0 0 0 0 11 0 1 102.91 102.91 3 0.019431 34108 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.176 25.893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13166 640 12690 30689 35734 35734 1 LNYIEGTK Unmodified 936.49165 0.49164694 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 7 0 1 57.541 57.541 2 0.032394 17982 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.908 9.2585 117.9 98.607 117.9 121.97 115.27 135.29 111 102 120 120 120 130 1 1 1 1 1 1 119210 13167 3038 12691 30690 35735 35735 1 LNYSDHDVIK Unmodified 1202.5932 0.5931519 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 5.5 0.5 1 1 50.03 50.03 3 3.1348E-05 15313 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.09 41.863 412.51 245.85 432.67 329.48 404.33 517.2 388 264 429 332 418 496 2 2 2 2 2 2 36284 13168 1836 12692 30691;30692 35736;35737 35737 2 LPACVVDCGTGYTK Unmodified 1539.7061 0.70614953 2836 Q99JY9;A0A087WRA1;A0A087WQ14;A0A087WPR6 Actr3 Actin-related protein 3 yes no 0 0 0 0 9.33 2.62 1 1 1 62.734 62.734 2;3 3.8976E-05 22227 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.769 61.891 29.865 0 30.145 0 0 0 28 0 28 0 0 0 1 0 1 0 0 0 4195.3 13169 2836 12693 30693;30694;30695 35738;35739;35740 35740 3 LPAEVSPINYSLCLKPDLLDFTFEGK Unmodified 2965.5147 0.51469716 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F6V7K3;F2Z3V5 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 9 0 1 97.31 97.31 4 0.002428 34828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.744 32.583 0 5.0719 14.844 0 0 0 0 5 14 0 0 0 0 1 1 0 0 0 2025.7 13170 1899 12694 30696 35741 35741 1 LPAKPEVSSDEDVQYR Unmodified 1831.8952 0.89520716 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 1 7.75 3.11 1 1 1 1 52.925 52.925 3 0.00028945 17525 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.481 49.648 109.03 140.65 57.074 99.363 63.418 116.52 102 140 56 92 65 111 2 3 1 2 1 2 20938 13171 2435 12695 30697;30698;30699;30700 35742;35743;35744;35745 35745 4 LPALHIAAR Unmodified 960.58688 0.58688473 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;G5E8J2;D3Z5M4;D3YTV8;G8JL84;E9QNT8;B7ZW98;A0A0R4J1N7;G3UY11;Q02357;Q0VGY9;D6RJ51;W4VSQ0;Q3UVY0;S4R229;S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank3;Ank1;Ank2 Ankyrin-3;Ankyrin-1;Ankyrin-2 no no 0 0 0 0 10.5 0.5 1 1 52.139 52.139 3 2.7738E-05 12574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.08 95.515 79.006 98.952 106.6 187.08 106.95 293.3 74 93 102 176 111 278 1 1 2 2 2 3 75461 13172 3450;3449;3451;3452 12696 30701;30702 35746;35747;35748 35746 3 LPANALLGEENK Unmodified 1267.6772 0.67721588 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 8.5 2.69 1 1 1 1 65.187 65.187 3 0.00057355 21750 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.827 43.052 206.88 165.13 255.07 100.62 308.89 160.68 195 167 250 102 305 157 3 2 3 2 3 2 25275 13173 162 12697 30703;30704;30705;30706 35749;35750;35751;35752 35750 4 LPANHPLLTGQR Unmodified 1315.7361 0.73606817 1596 P50516;D3Z1B9 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 8.83 3.62 1 1 2 1 1 44.928 44.928 2;3 3.1334E-40 9768 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 189.43 149.65 662.98 543.04 842.37 677.77 694.33 714.65 625 555 841 677 712 686 7 5 8 7 5 5 585040 13174 1596 12698 30707;30708;30709;30710;30711;30712 35753;35754;35755;35756;35757;35758;35759;35760 35758 8 LPANLLDQFEK Unmodified 1286.6871 0.68705229 609 B7ZNS2;B1AZP2 Dlgap4 Disks large-associated protein 4 yes no 0 0 0 0 10.5 2.5 1 1 81.625 81.625 3 0.0028589 28745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.674 0 20.387 0 0 20.056 37.781 29.848 19 0 0 19 37 28 1 0 0 1 1 1 5539.5 13175 609 12699 30713;30714 35761;35762 35761 2 LPASCLPASDSFR Unmodified 1419.6816 0.68164933 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 7.5 0.5 1 1 61.568 61.568 2 1.0213E-08 20011 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.843 64.785 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 2246.4 13176 2790 12700 30715;30716 35763;35764 35763 2 LPASDGLDLSQAAAR Unmodified 1483.7631 0.76307078 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 6 0.707 1 2 1 63.446 63.446 2;3 0.0038201 20642 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.198 25.936 89.819 27.776 28.993 88.853 65.473 57.571 84 28 28 84 65 55 4 1 1 3 2 2 20003 13177 1557 12701 30717;30718;30719;30720 35765;35766;35767;35768 35768 4 LPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWR Unmodified 3899.0694 0.06937056 3150 Q9DCS3;A2A845 Mecr Trans-2-enoyl-CoA reductase, mitochondrial yes no 0 0 0 1 10 0 1 94.469 94.469 5 8.3837E-09 30810 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.522 42.516 0 14.672 13.378 19.97 0 20.254 0 14 14 19 0 19 0 1 1 1 0 1 2699.9 13178 3150 12702 30721 35769 35769 1 LPAYLTIQMVR Unmodified 1303.7322 0.73222834 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 8 4.97 1 1 1 78.279 78.279 2;3 6.4683E-08 27336 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 117.31 77.987 0 10.433 57.802 0 43.932 0 0 10 54 0 42 0 0 1 2 0 1 0 15217 13179 853 12703 30722;30723;30724 35770;35771;35772 35770 3 LPCIFICENNR Deamidation (N) 1435.6588 0.6588054 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 1 0 0 8 0 1 76.16 76.16 2 0.043056 26235 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.825 47.128 39.516 36.703 0 0 58.576 0 37 37 0 0 56 0 1 1 0 0 1 0 3834.1 13180 1520 12704 30725 35773 35773 568 1 LPCIFICENNR Unmodified 1434.6748 0.67478982 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10.7 1.7 1 1 1 71.945 71.945 2;3 1.5548E-09 23577 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 132.88 80.485 79.067 118.1 56.302 197.66 63.159 116.52 74 111 56 185 65 111 1 2 1 3 1 2 68631 13181 1520 12704 30726;30727;30728 35774;35775;35776 35774 3 LPCQLHQVIVAR Unmodified 1432.7973 0.79728821 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 10 0 1 54.085 54.085 3 7.4304E-05 13388 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.313 67.978 0 0 57.58 67.613 0 59.696 0 0 56 65 0 56 0 0 1 1 0 1 15947 13182 1155 12705 30729 35777 35777 1 LPCTFNSCYTVNHK Unmodified 1739.776 0.77596042 2038 Q56A07 Scn2b Sodium channel subunit beta-2 yes yes 0 0 0 0 9 0 1 55.296 55.296 3 0.0001126 15647 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.519 68.687 78.907 42.841 46.804 0 65.675 67.416 74 46 46 0 65 65 1 1 1 0 1 1 6375.8 13183 2038 12706 30730 35778 35778 1 LPCVAAK Unmodified 757.41565 0.41564523 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 0 10.7 1.7 1 1 1 52.696 52.696 2 0.02025 12868 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.84 55.149 496.63 379.83 607.52 765.88 1024.3 825.23 468 398 594 731 1040 795 2 2 2 2 3 2 215360 13184 3011 12707 30731;30732;30733 35779;35780;35781 35780 3 LPCVEDYLSAILNR Unmodified 1661.8447 0.84469192 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 11.2 1.6 1 1 1 2 98.097 98.097 2;3 1.9559E-35 32137 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 170.95 142.66 140.91 17.694 13.024 88.458 94.101 72.629 134 19 14 85 93 70 4 1 1 4 2 3 111990 13185 1321 12708 30734;30735;30736;30737;30738 35782;35783;35784;35785;35786;35787;35788;35789 35785 8 LPDFIAK Unmodified 802.45889 0.45889025 2252 Q6PHU5 Sort1 Sortilin yes yes 0 0 0 0 9 0 1 70.738 70.738 2 0.040319 22949 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.116 28.15 98.908 60.878 96.475 0 0 88.478 93 65 93 0 0 83 1 1 1 0 0 1 5618.3 13186 2252 12709 30739 35790 35790 1 LPDGCLLQGTFYAR Unmodified 1609.7923 0.79226242 2888 Q99PL6 Ubxn6 UBX domain-containing protein 6 yes yes 0 0 0 0 8 0 1 75.28 75.28 2 0.0064127 25804 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.286 24.397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13187 2888 12710 30740 35791 35791 1 LPDGHEFK Unmodified 941.46068 0.46068117 1387 P16045 Lgals1 Galectin-1 yes yes 0 0 0 0 5 0 1 49.878 49.878 3 0.042104 15940 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.68 22.661 39.701 0 0 40.441 0 39.442 37 0 0 37 0 37 1 0 0 1 0 1 2358 13188 1387 12711 30741 35792 35792 1 LPDGSEIPLPPILLGK Unmodified 1657.9655 0.96545898 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 9 0.816 1 1 1 95.939 95.939 3 0.00020057 31351 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.472 43.274 9.535 5.32 40.21 49.693 26.78 47.731 9 5 38 47 28 47 1 1 2 3 2 2 10993 13189 3038 12712 30742;30743;30744 35793;35794;35795;35796;35797 35797 5 LPDLINDALHR Unmodified 1275.6935 0.69353465 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 0 0 0 8 0 1 73.356 73.356 3 0.036578 24869 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.449 24.225 0 0 30.296 0 0 39.442 0 0 28 0 0 37 0 0 1 0 0 1 3819.4 13190 889 12713 30745 35798 35798 1 LPDLISDALFCNGQIER Deamidation (N) 1960.9564 0.95642721 2968 Q9CS84;E0CY11;A0A0G2JES8;H3BK41 Nrxn1 Neurexin-1 yes no 0 1 0 0 7 0 1 95.162 95.162 3 0.00046486 35082 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.317 35.523 5.34 4.9599 0 0 0 0 5 5 0 0 0 0 1 1 0 0 0 0 694.42 13191 2968 12714 30746 35799 35799 1033 1 LPDLPGNYVTK Unmodified 1215.6499 0.6499385 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 8.5 0.5 1 1 68.523 68.523 3 0.033386 22684 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.052 20.846 48.777 34.942 104.99 0 0 49.036 46 37 102 0 0 46 1 1 2 0 0 1 5664.5 13192 2141 12715 30747;30748 35800;35801 35800 2 LPDLTTVISVDAPLPGTLLLDDIVAAGGK Unmodified 2873.6001 0.60014135 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 9 0 1 118.2 118.2 4 0.00028864 39233 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.562 35.267 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 677.02 13193 2688 12716 30749 35802 35802 1 LPDVYGVFQFK Unmodified 1311.6863 0.68632401 1219 O54734 Ddost Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 0 11 0 1 86.917 86.917 2 0.0052695 27638 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.841 34.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13194 1219 12717 30750 35803 35803 1 LPDYKPYPMYPATTSLVNVVPK Unmodified 2492.3025 0.30251954 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 1 10.5 0.5 1 1 79.569 79.569 4 0.00048785 24350 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.105 30.513 0 88.312 0 111.49 0 148.17 0 83 0 102 0 139 0 1 0 2 0 2 16848 13195 78 12718 30751;30752 35804;35805 35805 2 LPEAVQLIEK Unmodified 1138.6598 0.65977491 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 9.25 2.28 1 1 1 1 75.157 75.157 2;3 0.00071079 25716 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.763 37.737 59.261 191.57 139.82 174.31 294.63 203.23 56 186 140 167 296 195 2 5 3 3 5 3 43500 13196 775 12719 30753;30754;30755;30756 35806;35807;35808;35809;35810 35807 5 LPEDEPAPAAPLR Unmodified 1374.7143 0.71432967 2831 Q99JP7;A2AQN2 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 0 0 0 0 4 0 1 55.819 55.819 2 0.02139 19034 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.791 32.566 0 0 0 39.925 27.454 0 0 0 0 37 28 0 0 0 0 1 1 0 3030.9 13197 2831 12720 30757 35811 35811 1 LPEDLYNDR Unmodified 1133.5353 0.53530267 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 5 0 1 58.377 58.377 2 0.010898 19963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.267 45.54 0 0 60.592 0 77.404 0 0 0 56 0 74 0 0 0 1 0 1 0 4947.7 13198 2919 12721 30758 35812 35812 1 LPEELGRDQNTVETLQR Unmodified 1997.0178 0.017781914 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 4 0 1 56.317 56.317 3 0.056941 19310 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.171 12.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13199 2148 12722 30759 35813 35813 1 LPEGAPAR Unmodified 809.43955 0.43955179 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 5 0 1 39.881 39.881 2 0.052889 11040 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.464 11.832 39.129 45.341 57.674 0 37.384 38.375 37 46 56 0 37 37 1 1 1 0 1 1 8413.1 13200 2438 12723 30760 35814 35814 1 LPEGDLGK Unmodified 827.43888 0.43888309 51 A0A0A0MQM0;P63242;J3QPS8 Eif5a Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 0 0 0 0 6.5 0.5 1 1 54.578 54.578 2 0.016077 17508 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.452 38.005 98.953 80.431 72.321 54.387 133.48 0 93 83 74 56 130 0 1 1 1 1 1 0 7880.7 13201 51 12724 30761;30762 35815;35816 35815 2 LPEGHLK Unmodified 792.44939 0.4493882 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 8.5 2.69 1 1 1 1 43.372 43.372 3 0.0092638 10819 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.282 18.365 646.76 386.85 473.2 351.08 313.61 727.66 606 389 444 325 322 691 3 3 2 2 2 4 85912 13202 2585 12725 30763;30764;30765;30766 35817;35818;35819;35820 35819 4 LPEGTTPEK Unmodified 970.49713 0.49712625 2797 Q921I1;E9Q035 Tf;Gm20425 Serotransferrin yes no 0 0 0 0 8 3.56 1 1 1 48.257 48.257 2;3 0.0093304 15109 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.846 35.451 29.602 134.68 34.986 47.525 119.72 105.32 28 129 37 46 120 102 1 2 1 1 2 2 9887.5 13203 2797 12726 30767;30768;30769 35821;35822;35823 35823 3 LPENVVAVPNLSEAVQDADLLVFVIPHQFIHK Unmodified 3550.9188 0.91879014 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 10.5 2.5 1 1 107.29 107.29 5 4.4033E-14 36754 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.89 56.23 5.3198 26.199 2.5261 7.5004 0 25.584 5 25 3 7 0 24 1 2 1 1 0 2 4998.8 13204 1994 12727 30770;30771 35824;35825 35824 2 LPFAAAQIGNSFR Unmodified 1390.7357 0.73573382 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 8 4.97 1 1 1 75.124 75.124 2;3 7.6758E-11 25918 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 121.36 81.359 20.149 39.245 76.798 18.261 69.083 74.55 19 37 74 19 68 71 1 1 3 1 2 2 48007 13205 3002 12728 30772;30773;30774 35826;35827;35828 35826 3 LPFPIIDDK Unmodified 1056.5855 0.58554733 2194 Q6GT24;D3Z0Y2;O08709;Q8BG37 Prdx6;Prdx6b Peroxiredoxin-6 yes no 0 0 0 0 9.43 1.92 1 2 1 1 1 1 80.928 80.928 2;3 0.0006505 31156 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.07 55.013 394.51 257.16 490.06 318.73 370.32 308.79 371 259 482 315 371 296 7 4 8 5 4 5 208350 13206 2194 12729 30775;30776;30777;30778;30779;30780;30781 35829;35830;35831;35832;35833;35834;35835;35836;35837 35836 9 LPFPIIDDKGR Unmodified 1269.7081 0.70812208 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 1 9.5 0.5 1 1 70.326 70.326 3 0.0021083 20658 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.153 45.811 137.95 52.544 214.47 54.178 108.31 154.68 130 56 204 56 111 148 2 1 2 1 2 2 21366 13207 2194 12730 30782;30783 35838;35839 35839 2 LPFVINDGK Unmodified 1001.5546 0.55458155 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 10 0 1 72.6 72.6 3 0.0066567 21757 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.35 34.456 78.814 53.375 53.531 77.692 0 88.478 74 56 56 74 0 83 1 1 1 1 0 1 7122.2 13208 2160 12731 30784 35840 35840 1 LPGGELNPGEDEVEGLKR Unmodified 1907.9589 0.95887005 2926 Q9CQF3;A0A1D5RM23;A0A1D5RLS2 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 1 5 0 1 62.079 62.079 3 0.0020895 21746 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.547 30.444 0 20.216 0 0 46.477 47.71 0 19 0 0 46 46 0 1 0 0 1 1 3108.3 13209 2926 12732 30785 35841 35841 1 LPGGVVFHYRPGSTR Unmodified 1641.874 0.87395863 2122 Q61282 Acan Aggrecan core protein yes yes 0 0 0 1 12 0 1 50.925 50.925 4 0.00025205 10591 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.513 51.025 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 6234.3 13210 2122 12733 30786 35842 35842 1 LPGPTVSASYSLEYGK Unmodified 1667.8407 0.8406524 1323 P08030 Aprt Adenine phosphoribosyltransferase yes yes 0 0 0 0 8 0 1 69.233 69.233 3 0.026801 22977 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.597 14.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13211 1323 12734 30787 35843 35843 1 LPGQPPASMGR Unmodified 1109.5652 0.56516301 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 8 0 1 48.123 48.123 2 0.011601 12998 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.676 33.753 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13212 2132 12735 30788 35844 35844 1 LPHLGKHEK Unmodified 1057.6033 0.60326308 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 10.5 0.5 1 1 41.15 41.15 4 0.014375 8634 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.563 35.661 266.2 103.9 256.28 313.72 112.15 416.8 250 111 251 301 111 394 2 1 1 2 1 3 11355 13213 1883 12736 30789;30790 35845;35846;35847 35845 3 LPHSVLLEIQK Unmodified 1275.7551 0.75507227 2840 Q99K85 Psat1 Phosphoserine aminotransferase yes yes 0 0 0 0 10.7 1.7 1 1 1 64.967 64.967 2;3 2.777E-08 18251 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.46 80.984 69.745 86.115 131.42 171.34 178.72 38.103 65 83 130 167 177 37 2 1 1 3 2 1 28453 13214 2840 12737 30791;30792;30793 35848;35849;35850 35849 3 LPIFFFGTHETAFLGPK Unmodified 1921.0138 0.013806156 541 Q99JF8;A2BI12;F6RB63 Psip1 PC4 and SFRS1-interacting protein yes no 0 0 0 0 12 0 1 90.138 90.138 3 2.7988E-12 25713 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.08 96.43 16.095 0 0 0 25.369 22.728 15 0 0 0 25 22 1 0 0 0 1 1 2186.5 13215 541 12738 30794 35851 35851 1 LPIGAQPLAMVAGLEMK Unmodified 1737.9521 0.95213388 2206 Q6NVF0 Ocrl Inositol polyphosphate 5-phosphatase OCRL-1 yes yes 0 0 0 0 10 0 1 93.735 93.735 3 0.053596 30571 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.107 17.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13216 2206 12739 30795 35852 35852 1 LPIGDVATQYFADR Unmodified 1564.7886 0.78855725 1822 P80313;A0A0N4SV00;A0A0N4SUI8 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 7.67 0.471 1 2 78.595 78.595 2;3 1.5373E-21 27324 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 141.58 115.46 108.66 44.302 164.51 72.759 85.044 107.11 102 46 158 74 84 102 2 1 3 2 2 2 29956 13217 1822 12740 30796;30797;30798 35853;35854;35855 35855 3 LPIPDSQVLTINPALPVEDAAEDYAR Unmodified 2806.4389 0.43888968 2911 Q9CQ60;Q8CBG6;D3Z4X1;F6X8L5 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 8.8 3.49 1 1 1 2 93.284 93.284 3;4 1.2707E-07 37215 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.429 42.698 59.883 47.392 36.151 49.698 84.371 48.796 56 47 37 47 84 47 2 3 3 2 4 2 13175 13218 2911 12741 30799;30800;30801;30802;30803 35856;35857;35858;35859;35860 35860 5 LPITLNK Unmodified 797.50109 0.50108942 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 11 0.816 1 1 1 65.494 65.494 2;3 0.011124 17880 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.65 39.264 700.66 453.74 698.26 661.51 1587.8 795.03 659 475 701 655 1608 764 2 1 2 2 2 2 262810 13219 1401 12742 30804;30805;30806 35861;35862;35863 35862 3 LPKPELCPPVLYTLMTR Unmodified 2027.0948 0.094775368 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 12 0 1 83.033 83.033 3 0.0070842 22992 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.955 28.7 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 7457.2 13220 3261 12743 30807 35864 35864 1 LPLAGCQTLLSPIVSCGPPGVLLTR Unmodified 2618.4288 0.42879946 2593 Q8K1S4 Unc5a Netrin receptor UNC5A yes yes 0 0 0 0 12 0 1 93.561 93.561 3 0.0098822 26911 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 32.952 28.6 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 1090.8 13221 2593 12744 30808 35865 35865 1 LPLAISPVAR Unmodified 1035.6441 0.64406526 1965 Q3UDE2 Ttll12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 0 12 0 1 67.976 67.976 2 0.014981 17044 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.019 37.397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13222 1965 12745 30809 35866 35866 1 LPLAQSADYGTNLQTVQLFMK Deamidation (N) 2338.1879 0.18788371 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 1 0 0 10 0 1 90.511 90.511 4 5.1043E-06 29458 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.034 50.246 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1347.3 13223 893 12746 30810 35867 35867 243 1 LPLAQSADYGTNLQTVQLFMK Unmodified 2337.2039 0.20386813 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 10 0 1 90.546 90.546 3 0.0019158 29469 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.507 25.047 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13224 893 12746 30811 35868 35868 1 LPLAVVGSNTIIEVNGK Deamidation (N) 1723.972 0.97200092 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 10 1.87 1 1 1 1 84.109 84.109 3 8.8256E-06 29296 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.89 55.051 277.49 168.14 174.48 140.27 314.47 249.6 260 167 167 130 315 241 5 3 3 2 6 5 22202 13225 879 12747 30812;30813;30814;30815 35869;35870;35871;35872;35873;35874 35871 236 6 LPLAVVGSNTIIEVNGKR Deamidation (N) 1880.0731 0.073111949 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 1 9 0 1 74.829 74.829 3 2.2395E-33 24827 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 145.46 134.35 0 0 47.904 41.941 59.024 52.682 0 0 46 42 60 51 0 0 1 1 1 1 20527 13226 879 12748 30816 35875 35875 236 1 LPLDVLGR Unmodified 881.53345 0.53345218 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 9 0 1 72.262 72.262 2 0.0073025 23720 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.187 33.941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13227 2095 12749 30817 35876 35876 1 LPLHTLTSSTPVVLVR Unmodified 1732.0247 0.024705193 938 Q8BK08;E9Q933 Tmem11 Transmembrane protein 11, mitochondrial yes no 0 0 0 0 11 0 1 68.187 68.187 3 2.5538E-05 19285 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.854 75.747 89.059 0 0 101.65 0 0 83 0 0 93 0 0 1 0 0 1 0 0 31131 13228 938 12750 30818 35877 35877 1 LPLILVGNK Unmodified 965.62735 0.62735256 2372 Q8BG51 Rhot1 Mitochondrial Rho GTPase 1 yes yes 0 0 0 0 4.67 5.19 2 1 78.068 78.068 2 1.0466E-08 21173 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.29 0 93.504 70.849 133.41 153.84 56.512 92.195 88 74 134 149 60 88 2 2 3 3 1 2 21547 13229 2372 12751 30819;30820;30821 35878;35879;35880;35881 35881 4 LPLIVEDFVK Unmodified 1171.6853 0.68526137 2359 Q8BFQ8 Pddc1 Parkinson disease 7 domain-containing protein 1 yes yes 0 0 0 0 10 2.16 1 1 1 91.848 91.848 2;3 0.012725 32531 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.546 42.91 49.044 19.892 19.365 29.173 133.35 0 47 19 19 28 130 0 2 1 1 1 3 0 6404.7 13230 2359 12752 30822;30823;30824 35882;35883;35884;35885 35883 4 LPLLDIACNK Unmodified 1155.6322 0.63217995 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 10 0.707 1 2 1 79.072 79.072 2;3 0.0011385 26855 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.464 56.799 156.85 236.06 187.13 104.98 215.52 142.86 148 231 186 102 214 139 3 4 3 2 4 3 24787 13231 2582 12753 30825;30826;30827;30828 35886;35887;35888;35889;35890 35886 5 LPLLLVANAGTAAVGHTDK Unmodified 1860.0469 0.046897198 153 Q99K01;A0A0R4J034;D3YZA7 Pdxdc1 Pyridoxal-dependent decarboxylase domain-containing protein 1 yes no 0 0 0 0 1 0 1 78.756 78.756 3 0.008516 27427 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 38.418 20.053 0 0 20.558 0 0 19.188 0 0 19 0 0 18 0 0 1 0 0 1 1505 13232 153 12754 30829 35891 35891 1 LPLLPHEVR Unmodified 1072.6393 0.63931423 1224 O54984 Asna1 ATPase Asna1 yes yes 0 0 0 0 10 0 1 55.58 55.58 3 0.010712 13968 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.982 29.423 20.292 18.848 0 61.208 0 39.442 19 19 0 56 0 37 1 1 0 1 0 1 3282.9 13233 1224 12755 30830 35892 35892 1 LPLMECVQMTQDVQK Unmodified 1818.8678 0.8678119 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 8 0 1 76.309 76.309 3 0.00013437 26355 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.972 39.996 118.72 41.517 29.063 0 46.807 97.802 111 47 28 0 46 93 2 2 1 0 1 2 3244.7 13234 2507 12756 30831 35893;35894 35894 2 LPLMECVQVTK Unmodified 1316.6832 0.68322924 1568;1357 P47857;P12382 Pfkm;Pfkl ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type no no 0 0 0 0 10 0.816 1 1 1 73.396 73.396 2;3 1.3093E-07 24187 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.27 78.945 46 38.789 124.24 97.856 37.384 87.411 46 37 121 93 37 83 1 1 3 2 1 2 31565 13235 1568;1357 12757 30832;30833;30834 35895;35896;35897;35898 35895 4 LPLQDVYK Unmodified 974.54368 0.54368251 1729;1341 P10126;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 9.83 2.11 1 1 1 1 1 1 66.077 66.077 2 0.0030877 21452 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.98 62.984 1145.9 1556.4 1882.9 1592.3 1301 1970.4 1080 1565 1890 1578 1310 1875 4 7 6 6 5 5 508690 13236 1341;1729 12758 30835;30836;30837;30838;30839;30840 35899;35900;35901;35902;35903;35904;35905 35900 7 LPLQLDDAIRPEVEGEEDGR Unmodified 2250.1128 0.11280451 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 1 5 0 1 72.021 72.021 3 0.00052796 26352 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.883 31.33 30.044 0 0 14.875 22.701 19.606 28 0 0 14 23 19 1 0 0 1 1 1 9710 13237 2803 12759 30841 35906 35906 1 LPLVNSYTR Unmodified 1061.5869 0.58694431 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 10 0 1 60.46 60.46 2 0.042393 16265 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.708 30.912 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13238 1083 12760 30842 35907 35907 1 LPLVSVNQEK Unmodified 1125.6394 0.63937381 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 9 0 1 63.594 63.594 3 0.0038045 19603 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.102 35.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13239 360 12761 30843 35908 35908 1 LPLWQQACADPNKIPDR Unmodified 2021.0153 0.015279494 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 1 9.5 0.5 1 1 65.77 65.77 3 0.00075494 20690 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.412 39.993 54.454 48.16 92.052 0 51.2 101.94 51 46 88 0 51 97 1 1 2 0 1 2 16779 13240 607 12762 30844;30845 35909;35910 35909 2 LPLYGLLQAK Unmodified 1114.675 0.67503104 2313 Q80U56;A0A0N4SUI4 Avl9 Late secretory pathway protein AVL9 homolog yes no 0 0 0 0 13 0 1 45.986 45.986 3 0.020973 14348 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.447 0.44525 256.46 158.78 224.17 165.53 193.43 176.77 241 169 224 167 198 171 1 1 1 1 1 1 10711 13241 2313 12763 30846 35911 35911 1 LPMASSLEHGK Unmodified 1168.591 0.59104341 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.5 0.5 1 1 52.917 52.917 3 2.109E-05 14414 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.456 29.731 58.541 182.25 0 168.88 144.42 76.599 55 175 0 157 148 74 1 2 0 2 2 1 8315.7 13242 2186 12764 30847;30848 35912;35913 35913 2 LPNFGFVVFDDSEPVQR Unmodified 1964.9632 0.96322715 1847 P97379 G3bp2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 89.89 89.89 3 1.3242E-06 31815 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.738 69.951 50.431 20.216 0 30.256 76.072 28.772 47 19 0 28 75 28 1 1 0 1 3 1 18673 13243 1847 12765 30849;30850;30851;30852 35914;35915;35916;35917 35916 4 LPNGLVIASLENYAPLSR Deamidation (N) 1927.0415 0.041477469 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 1 0 0 9.29 2.43 2 2 1 2 93.824 93.824 3 2.1149E-103 34115 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 225.13 176.91 137.5 126.93 103.5 123.07 79.546 136.51 129 129 101 118 80 129 4 5 4 5 4 5 126740 13244 3117 12766 30853;30854;30855;30856;30857;30858;30859 35918;35919;35920;35921;35922;35923;35924;35925;35926 35922 1085 9 LPNGLVIASLENYAPLSR Unmodified 1926.0575 0.057461885 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 10.9 1.25 1 2 2 1 1 89.606 89.606 2;3 9.8357E-10 29124 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.02 91.341 79.118 95.353 27.096 100.12 178.32 76.741 74 93 28 94 177 74 2 2 2 3 5 3 41195 13245 3117 12766 30860;30861;30862;30863;30864;30865;30866 35927;35928;35929;35930;35931;35932;35933;35934 35929 8 LPNLLGR Unmodified 781.48102 0.48102268 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 11 0 1 64.223 64.223 2 0.019555 17435 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.74 20.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27937 13246 2379 12767 30867 35935 35935 1 LPNLSPLAIK Unmodified 1064.6594 0.65938097 619 B2RQR5;Q8BPQ7;D3Z7V4;D3YUT7 Sgsm1 Small G protein signaling modulator 1 yes no 0 0 0 0 11 0 1 76.108 76.108 2 0.0022108 22710 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.898 36.859 0 0 78.035 45.627 0 0 0 0 74 46 0 0 0 0 1 1 0 0 8793.8 13247 619 12768 30868 35936 35936 1 LPNSVLGK Unmodified 826.49125 0.49125301 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 no no 0 0 0 0 10 0 1 59.837 59.837 2 0.054791 15962 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.691 12.38 88.288 41.412 94.446 72.955 122.17 0 83 46 93 74 120 0 1 1 1 1 1 0 9114.6 13248 3271 12769 30869 35937 35937 1 LPPCTIFQAFK Unmodified 1320.69 0.69002918 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 11.7 0.471 1 2 82.652 82.652 2;3 0.0024936 22857 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.693 42.217 14.952 73.472 0 0 57.607 45.26 14 70 0 0 56 44 1 2 0 0 1 2 9514.8 13249 1039 12770 30870;30871;30872 35938;35939;35940 35939 3 LPPIPVVPVSAQK Unmodified 1343.8177 0.81767253 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 0 11 0 1 75.199 75.199 3 0.029959 22286 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.219 22.587 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 3623.1 13250 2994 12771 30873 35941 35941 1 LPPNVVAIPDVVQAATGADILVFVVPHQFIGK Unmodified 3323.8646 0.86456973 1368 P13707 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic yes yes 0 0 0 0 10.5 0.5 2 2 109.01 109.01 4;5 7.7529E-11 34016 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.03 58.973 17.05 23.264 17.237 21.302 15.093 11.467 16 22 16 20 15 11 2 2 1 2 2 2 14932 13251 1368 12772 30874;30875;30876;30877 35942;35943;35944;35945;35946;35947;35948;35949;35950 35944 9 LPPTLCTWLK Unmodified 1227.6686 0.66856545 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 11.5 0.5 1 1 80.54 80.54 2 0.011704 22019 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.04 36.298 49.358 0 0 0 18.867 29.31 46 0 0 0 19 28 1 0 0 0 1 1 3019.7 13252 63 12773 30878;30879 35951;35952 35952 2 LPPTLLDQFEK Unmodified 1299.7075 0.70745338 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 0 8.5 0.5 1 1 80.741 80.741 3 0.00044932 28351 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.017 48.07 50.172 18.848 27.53 58.713 74.707 0 47 19 28 56 74 0 2 1 1 1 2 0 5452.2 13253 582 12774 30880;30881 35953;35954 35953 2 LPPVLLVHLK Unmodified 1127.7431 0.74305102 469 A2AI52;Q80U87 Usp8 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 8 yes no 0 0 0 0 1 0 1 75.194 75.194 3 0.0016665 25774 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.735 22.577 39.564 27.124 0 40.441 0 29.848 37 28 0 37 0 28 1 1 0 1 0 1 2796.7 13254 469 12775 30882 35955 35955 1 LPPVPFAQTFGTNLEDR Unmodified 1900.9683 0.96831253 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 10.7 1.7 1 1 1 83.468 83.468 3 1.3508E-08 32476 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.78 89.719 138.52 172.46 72.484 143.69 245.84 263.75 130 172 74 139 250 254 2 4 1 3 4 4 40421 13255 1424 12776 30883;30884;30885 35956;35957;35958;35959 35959 4 LPPVPFAQTFGTNLEDRK Unmodified 2029.0633 0.063275544 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 9.67 0.943 2 1 75.562 75.562 3;4 1.4742E-05 25184 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.935 47.46 69.09 43.972 152.82 0 160.93 197.92 65 42 144 0 157 195 1 1 2 0 2 2 28783 13256 1424 12777 30886;30887;30888 35960;35961;35962 35960 3 LPQLEALLPPR Unmodified 1245.7445 0.74450759 3248 Q9JMC3 Dnaja4 DnaJ homolog subfamily A member 4 yes yes 0 0 0 0 9 0 1 81.442 81.442 2 0.020082 28084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.548 38.728 30.044 0 0 30.104 26.577 38.684 28 0 0 28 28 37 1 0 0 1 1 1 2150.2 13257 3248 12778 30889 35963 35963 1 LPQLVDMSAQIASGMAYVER Unmodified 2178.0813 0.081310149 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 10 0 1 97.049 97.049 3 0.0016575 31766 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.81 27.58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13258 1048 12779 30890 35964 35964 1 LPQPPEGQCYSN Unmodified 1388.6031 0.60306466 3014 Q9CZY3;B7ZBY7;E9PY39 Ube2v1;Gm20431 Ubiquitin-conjugating enzyme E2 variant 1 yes no 0 0 0 0 5 0 1 57.58 57.58 2 0.0010881 19657 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.922 59.414 69.657 17.545 0 0 38.741 29.31 65 19 0 0 38 28 2 1 0 0 2 1 4239.6 13259 3014 12780 30891 35965;35966 35966 2 LPQPPEGQTYNN Unmodified 1356.631 0.63099397 3050 Q9D2M8;A6X925;B2KF55 Ube2v2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 0 5 0 1 56.733 56.733 2 0.0008743 19099 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.974 63.75 20.33 0 9.6355 9 0 57.848 19 0 9 9 0 56 1 0 1 1 0 2 3763.2 13260 3050 12781 30892 35967;35968;35969 35968 3 LPQPSSGR Unmodified 840.44537 0.44536545 2419;1960 Q8BK30;Q3U422 Ndufv3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial no no 0 0 0 0 7 0 1 37.357 37.357 2 0.014301 8574 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.666 30.062 0 0 77.108 66.449 0 69.29 0 0 74 65 0 65 0 0 1 1 0 1 15959 13261 2419;1960 12782 30893 35970 35970 1 LPQVAEEISGPLTSANK Unmodified 1752.9258 0.92577901 1170 O08917;G3UYU4 Flot1 Flotillin-1 yes no 0 0 0 0 6 0 1 76.297 76.297 3 1.1163E-06 27832 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.234 59.159 20.157 0 38.672 28.299 0 29.848 19 0 37 28 0 28 1 0 1 1 0 1 5695 13262 1170 12783 30894 35971 35971 1 LPSEGPQPAHVVVGDVR Unmodified 1755.9268 0.92678206 864 E9PZC3;Q923D2;A0A0U1RPU7 Blvrb Flavin reductase (NADPH) yes no 0 0 0 0 6 0 1 52.35 52.35 3 7.3277E-06 16460 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.385 71.31 48.837 0 87.608 43.816 65.977 0 46 0 83 46 65 0 1 0 1 1 1 0 5419.1 13263 864 12784 30895 35972 35972 1 LPSFELLHK Unmodified 1082.6124 0.61243078 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 10 0 1 68.603 68.603 3 0.0010983 19880 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83 37.688 168.85 136.51 0 178.12 234.49 0 158 139 0 167 232 0 1 1 0 1 1 0 21638 13264 1955 12785 30896 35973 35973 1 LPSFSSSYTELQSIMYALGVGASVK Unmodified 2634.3251 0.32510547 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 11 0 1 111.31 111.31 4 0.018379 36043 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.958 16.943 6.438 0 0 0 7.322 0 6 0 0 0 7 0 1 0 0 0 1 0 555.64 13265 1602 12786 30897 35974 35974 1 LPSGIGCSTILSPEGSAQFAAQIFGLNNHLVWAK Unmodified 3582.8293 0.82932321 3146 Q9DCL9 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 0 11 0 1 100.04 100.04 4 0.034181 32962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 21.749 15.004 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 3143.6 13266 3146 12787 30898 35975 35975 1 LPSGVFSLEFQDFVNK Unmodified 1825.9251 0.92505073 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 0 10.2 1.46 3 1 1 1 93.441 93.441 2;3;4 1.612E-05 30393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.069 71.1 29.904 47.765 53.104 59.147 94.932 88.737 28 47 52 56 93 84 1 2 3 3 2 3 67208 13267 1500 12788 30899;30900;30901;30902;30903;30904 35976;35977;35978;35979;35980;35981;35982 35980 7 LPSISDLDSIFGPVLSPK Unmodified 1884.0244 0.024430422 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 0 10 0.816 1 1 1 103.55 103.55 3 3.0308E-07 33322 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.653 69.959 34.089 32.581 13.93 6.3946 32.258 36.39 32 33 14 6 32 35 2 2 1 1 2 3 5824.4 13268 2691 12789 30905;30906;30907 35983;35984;35985 35984 3 LPSLDQLQGQLVGGLTHLMAQTR Unmodified 2475.3268 0.32677723 1913 Q3TBW2 Mrpl10 39S ribosomal protein L10, mitochondrial yes yes 0 0 0 0 12 0 1 98.439 98.439 3 0.061176 28104 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 25.407 11.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 719.74 13269 1913 12790 30908 35986 35986 1 LPSPTAAPQQSASQATPVTQGQGR Unmodified 2377.1986 0.19859983 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8.29 2.12 1 2 2 1 1 51.097 51.097 3;4 3.7467E-17 14363 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.9 81.25 89.889 134.84 140.06 145.97 93.944 199.86 84 134 139 139 92 190 2 4 4 3 2 6 98786 13270 1282 12791 30909;30910;30911;30912;30913;30914;30915 35987;35988;35989;35990;35991;35992;35993;35994 35992 8 LPSQTESVTSNR Unmodified 1317.6525 0.6524577 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 8 3.56 1 1 1 42.933 42.933 2 9.4857E-18 12008 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.95 114.31 9.4048 65.858 17.934 18.979 38.218 19.163 9 65 19 19 38 19 1 2 1 1 1 1 8834.3 13271 1983 12792 30916;30917;30918 35995;35996;35997 35996 3 LPSRPPLPGSGGSQSGAK Unmodified 1691.8955 0.89548193 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 1 9 0 1 48.792 48.792 3 0.0027776 12460 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.112 18.053 49.014 0 57.772 57.765 0 39.442 46 0 56 56 0 37 1 0 1 1 0 1 7808.1 13272 2465 12793 30919 35998 35998 1 LPSVPQIAK Unmodified 951.57532 0.57531699 243 Q5SVL6;A0A171EBK8 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 0 9 0 1 64.626 64.626 2 0.018635 20102 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.27 45.571 0 0 74.862 116.86 0 69.29 0 0 74 111 0 65 0 0 1 1 0 1 4791 13273 243 12794 30920 35999 35999 1 LPTGAPKPSR Unmodified 1022.5873 0.58727866 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 1 10 0 1 40.978 40.978 3 0.021646 8233 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.718 33.077 88.397 52.508 66.734 0 97.278 0 83 56 65 0 93 0 1 1 1 0 1 0 5196.2 13274 178 12795 30921 36000 36000 1 LPTGINPLTLHIMR Unmodified 1574.8967 0.89666791 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 11.5 0.5 1 1 73.563 73.563 3 0.00064792 19111 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.394 50.731 0 0 49.772 0 46.807 47.106 0 0 46 0 46 46 0 0 1 0 1 2 12988 13275 2204 12796 30922;30923 36001;36002 36002 2 LPTPIAGLDNTILFLR Unmodified 1753.0138 0.013806156 675 D3YU22;Q3UH68 Limch1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 0 10 0 1 96.498 96.498 3 0.00060262 31580 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.344 40.991 20.33 0 9.6355 0 0 24.518 19 0 9 0 0 23 1 0 1 0 0 1 1869.5 13276 675 12797 30924 36003 36003 1 LPTTTFIGGPENTLSLR Unmodified 1815.9731 0.97306355 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 9 0.816 1 1 1 77.389 77.389 2;3 6.7041E-05 26007 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.106 49.027 88.541 45.631 48.368 75.962 108.29 125.9 83 46 46 74 111 121 2 1 1 2 2 2 27796 13277 628 12798 30925;30926;30927 36004;36005;36006 36005 3 LPVAIPAHK Unmodified 944.58074 0.58073672 969 E9QNE9;Q99JP0 Map4k3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 yes no 0 0 0 0 10 0 1 55.288 55.288 3 0.059557 13891 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.599 21.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13278 969 12799 30928 36007 36007 1 LPVAQSQK Unmodified 869.49707 0.49706667 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 9 0.816 1 1 1 46.494 46.494 2 0.0012692 12275 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 143.89 72.591 128.29 228.93 172.74 27.674 103.11 146.3 121 226 167 28 102 139 2 3 2 1 2 2 35921 13279 2517 12800 30929;30930;30931 36008;36009;36010 36008 3 LPVDFSNIPTYLLK Unmodified 1618.897 0.89704506 788 D3Z7P0;Q8K3W0 Bre BRCA1-A complex subunit BRE yes no 0 0 0 0 11 0.816 1 1 1 95.255 95.255 2;3 0.00012453 31125 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.013 62.889 30.044 9.2562 19.128 19.627 29.288 14.924 28 9 19 19 28 14 1 1 1 1 1 1 7087.6 13280 788 12801 30932;30933;30934 36011;36012;36013;36014 36012 4 LPVFCQLILK Unmodified 1229.7206 0.72060102 959 Q0GNC1;E9QLA5;A0A1Y7VM80 Inf2 Inverted formin-2 yes no 0 0 0 0 6.5 5.5 1 1 88.133 88.133 3 0.00096659 24866 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.827 33.198 0 0 29.01 28.875 18.538 38.913 0 0 28 28 19 37 0 0 1 1 1 1 4469.5 13281 959 12802 30935;30936 36015;36016 36016 2 LPVFSSLSLGLLPER Unmodified 1626.9345 0.9344932 520 A2ATK8;A2ATL0;A2ATK9 Fam171a1 yes no 0 0 0 0 12 0 1 95.157 95.157 3 2.7692E-05 27278 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.566 68.135 0 4.9917 19.641 13.868 14.007 0 0 5 19 14 14 0 0 1 1 1 1 0 2319 13282 520 12803 30937 36017 36017 1 LPVGFTFSFPCR Unmodified 1426.7067 0.70674187 1055 G3UVV4;P17710;D3YYR4;D3Z365;D3Z105 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.6 5.43 2 1 1 1 85.332 85.332 2;3 3.599E-23 23719 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 163.9 130.97 78.858 73.224 134.79 0 190.92 153.67 74 75 129 0 185 148 1 2 4 0 3 4 75770 13283 1055 12804 30938;30939;30940;30941;30942 36018;36019;36020;36021;36022;36023 36022 6 LPVGPSHK Unmodified 833.47594 0.4759373 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 0 10 0 1 41.925 41.925 3 0.028353 8556 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.775 33.254 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13284 3380 12805 30943 36024 36024 1 LPVGTTATLYFR Unmodified 1337.7343 0.73433683 1057 G3UWE1;Q52L67;Q9CY27;A0A1D5RLH3 Tecr Very-long-chain enoyl-CoA reductase yes no 0 0 0 0 10 0 1 72.805 72.805 3 0.064787 21884 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.847 18.067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13285 1057 12806 30944 36025 36025 1 LPVLLLGR Unmodified 879.59057 0.59057313 3308 Q9R118 Htra1 Serine protease HTRA1 yes yes 0 0 0 0 1 0 1 78.709 78.709 2 0.0036395 27382 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.15 87.262 0 0 37.941 46.993 54.42 58.143 0 0 37 46 56 56 0 0 1 1 1 1 9789.1 13286 3308 12807 30945 36026 36026 1 LPVPASAPIPFFHR Unmodified 1547.8613 0.86126868 493 A2AMH3;A2AMH5;A2AMH4;Q6X893 Slc44a1 Choline transporter-like protein 1 yes no 0 0 0 0 10 0 1 75.875 75.875 3 0.051168 23017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 33.227 12.564 20.387 0 0 20.075 36.791 28.798 19 0 0 19 37 28 1 0 0 1 1 1 5114.6 13287 493 12808 30946 36027 36027 1 LPVPPLQQSLDYYLK Unmodified 1772.9713 0.97127264 1129 P47934;H7BX88;B7ZDD7 Crat Carnitine O-acetyltransferase yes no 0 0 0 0 9 0 1 90.045 90.045 3 0.004015 31846 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.964 26.301 0 29.792 0 0 0 39.442 0 28 0 0 0 37 0 1 0 0 0 1 2921.6 13288 1129 12809 30947 36028 36028 1 LPVSIPLFGR Unmodified 1097.6597 0.65971533 2017 Q3V0I2 Prr7 Proline-rich protein 7 yes yes 0 0 0 0 12 0 1 84.844 84.844 2 6.0487E-05 23667 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.3 82.41 49.358 0 0 0 56.251 67.685 46 0 0 0 56 65 1 0 0 0 1 1 8963.7 13289 2017 12810 30948 36029 36029 1 LPVTINK Unmodified 783.48544 0.48543935 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 10.5 0.5 1 1 59.621 59.621 2 0.017071 15404 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.04 47.888 147.69 332.26 147.13 120.02 126.2 124.32 139 337 148 120 130 120 1 2 1 1 1 1 127460 13290 1400 12811 30949;30950 36030;36031 36031 2 LPVTNEMVHNLVAIELAYINTK Unmodified 2481.3301 0.33013127 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 10.3 1.89 2 1 99.87 99.87 3;4 6.789E-05 40233 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.426 36.116 0 87.251 93.155 50.191 0 68.96 0 83 93 51 0 65 0 1 2 2 0 3 6680.4 13291 815;2590 12812 30951;30952;30953 36032;36033;36034 36034 3 LPVVIGGLLDVDCSEDVIK Unmodified 2040.0813 0.081293373 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.33 2.16 2 2 2 1 2 97.089 97.089 3;4 1.8278E-20 35666 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.45 117.51 346.75 183.67 213.54 265.83 285.14 313.58 325 189 206 251 286 299 11 9 8 10 7 10 136960 13292 2185 12813 30954;30955;30956;30957;30958;30959;30960;30961;30962 36035;36036;36037;36038;36039;36040;36041;36042;36043;36044;36045;36046;36047;36048;36049;36050 36035 16 LPYELQK Unmodified 889.49092 0.49091866 1581 P48722;E0CY23;A0A0N4SW76 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 7.5 0.5 1 1 61.318 61.318 2 0.026917 19166 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.942 34.393 217.07 88.753 231.08 84.977 188.61 202.49 204 93 223 83 185 195 2 1 2 1 1 2 20574 13293 1581 12814 30963;30964 36051;36052 36052 2 LPYNVSDDPWLVAYNFLQK Unmodified 2281.1419 0.1419198 1466 P27612;F7D1R5 Plaa Phospholipase A-2-activating protein yes no 0 0 0 0 10.7 1.7 1 1 1 102.49 102.49 3 2.5796E-08 41641 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.942 55 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 4372.6 13294 1466 12815 30965;30966;30967 36053;36054;36055 36055 3 LPYTEGDAQQLQR Unmodified 1517.7474 0.74742071 488 A2ALS5;A2ALS4 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 0 0 0 5.33 0.471 2 1 54.055 54.055 2;3 3.5893E-09 17253 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.011 60.716 9.657 29.792 0 39.898 28.861 49.036 9 28 0 37 28 46 1 1 0 2 1 1 7226.3 13295 488 12816 30968;30969;30970 36056;36057;36058 36058 3 LQAAENEK Unmodified 901.45051 0.45051041 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6 Ppp1r9a yes no 0 0 0 0 5 0 1 41.786 41.786 2 0.027198 12008 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.985 29.538 29.697 0 58.357 46.8 0 0 28 0 56 46 0 0 1 0 1 1 0 0 2294.8 13296 1119 12817 30971 36059 36059 1 LQAAYAGDK Unmodified 935.47125 0.47124585 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7 0.816 1 1 1 48.569 48.569 2 2.1038E-05 13114 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.2 77.201 197.11 119.32 313.74 109.46 251.12 231.39 186 125 302 111 250 223 4 2 4 2 3 3 39797 13297 2148 12818 30972;30973;30974 36060;36061;36062;36063 36063 4 LQAAYAGDKADDIQK Unmodified 1605.7999 0.79985021 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 9.5 3.5 1 1 53.466 53.466 3;4 0.001973 17804 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.918 40.812 148.14 101.2 83.29 0 168.4 182.81 139 102 83 0 167 176 2 1 1 0 2 2 15396 13298 2148 12819 30975;30976 36064;36065 36065 2 LQAEAPHIVVGTPGR Unmodified 1543.8471 0.84707518 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 7 0.816 1 1 1 52.722 52.722 3 1.6984E-11 16607 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.54 102.82 109.17 85.343 0 80.046 139.76 96.418 102 84 0 74 139 93 2 2 0 1 2 2 44871 13299 1345 12820 30977;30978;30979 36066;36067;36068 36066 3 LQAEGLSPR Unmodified 969.52434 0.52434406 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 46.43 46.43 2 0.0029497 12906 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.732 39.178 187.95 148.21 189.11 265.31 346.13 287.54 176 148 185 259 352 279 2 2 3 4 4 4 54447 13300 1582 12821 30980;30981;30982;30983 36069;36070;36071;36072 36071 4 LQAEIFQAR Unmodified 1074.5822 0.58219329 1325 P08226 Apoe Apolipoprotein E yes yes 0 0 0 0 7 0 1 60.858 60.858 2 0.0029497 19709 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.732 38.854 158.14 0 111.62 172.61 174.04 122.95 148 0 111 167 178 120 1 0 1 1 1 1 14289 13301 1325 12822 30984 36073 36073 1 LQAFLQDLDDFK Unmodified 1451.7296 0.72964538 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0.707 1 2 1 96.554 96.554 2;3 3.1505E-05 34566 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.522 36.154 20.387 14.896 0 30.079 27.906 14.924 19 14 0 28 28 14 1 1 0 1 1 1 5919.2 13302 893 12823 30985;30986;30987;30988 36074;36075;36076;36077 36076 4 LQAFSAAIESCNK Unmodified 1437.6922 0.69221402 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 8.5 0.5 1 1 68.854 68.854 3 7.5849E-05 22079 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.875 63.342 69.065 33.271 86.115 54.527 82.344 57.346 65 37 84 56 83 56 1 1 1 1 1 1 12483 13303 1491 12824 30989;30990 36078;36079 36079 2 LQAGEETASHYR Unmodified 1360.6371 0.63714198 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 37.8 37.8 3 2.387E-40 10582 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 191.48 146.11 207.76 481.47 465.89 440.01 408.39 234.07 195 473 472 435 411 223 2 5 4 4 3 3 169480 13304 3355 12825 30991;30992;30993;30994;30995 36080;36081;36082;36083;36084 36081 5 LQAGIDLCETR Unmodified 1274.6289 0.62888548 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 9 4 1 1 57.693 57.693 2;3 0.01831 19820 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.28 22.54 0 76.539 131.45 103.65 0 128.99 0 74 130 102 0 121 0 2 2 2 0 2 10232 13305 2487 12826 30996;30997 36085;36086 36085 2 LQAGTVFVNTYNK Unmodified 1453.7565 0.75652884 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 10.7 1.7 1 1 1 65.252 65.252 2;3 1.3769E-10 18332 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.31 94.544 217.72 90.277 121.16 191.18 260.16 115.74 204 93 120 186 260 111 3 1 1 3 2 1 21862 13306 2633 12827 30998;30999;31000 36087;36088;36089 36088 3 LQAGTVFVNTYNK Deamidation (N) 1454.7405 0.74054442 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 1 0 0 11 0 1 65.141 65.141 3 0.0042734 17814 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.227 35.991 0 0 85.505 96.553 0 0 0 0 83 93 0 0 0 0 1 1 0 0 13177 13307 2633 12827 31001 36090 36090 959 1 LQAHLVAQTNLLR Unmodified 1475.8572 0.85724593 1157 O08539 Bin1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 56.774 56.774 3 8.6043E-07 14135 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.815 50.484 137.74 145.32 171.28 0 0 0 130 148 167 0 0 0 1 1 1 0 0 0 34653 13308 1157 12828 31002;31003 36091;36092 36092 2 LQAIAEK Unmodified 771.44905 0.44905385 3360;2447 Q9Z0P4;Q3UZP7;Q8BR92;G3X9P1 Palm;Palm2;Pakap Paralemmin-1;Paralemmin-2 no no 0 0 0 0 8 0 1 53.278 53.278 2 0.019615 15343 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.66 17.295 200.6 139.76 250.39 167.61 0 192.95 189 148 247 167 0 181 1 1 1 1 0 1 32113 13309 3360;2447 12829 31004 36093 36093 1 LQALAPDLFHGLR Unmodified 1449.8092 0.80923311 2606 Q8K377;E0CX41 Lrrtm1 Leucine-rich repeat transmembrane neuronal protein 1 yes no 0 0 0 0 10 0 1 75.481 75.481 3 0.015491 22830 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.52 21.291 69.745 0 0 0 94.991 66.579 65 0 0 0 93 65 1 0 0 0 1 1 8469.5 13310 2606 12830 31005 36094 36094 1 LQALDTGWNELHK Unmodified 1523.7732 0.77324153 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 2.94 1 1 1 67.798 67.798 3 7.9595E-05 23844 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.746 45.443 372.31 573.66 334.42 662.77 661.91 672.95 349 568 343 636 684 649 2 4 3 4 4 4 85424 13311 2148 12831 31006;31007;31008 36095;36096;36097;36098 36095 4 LQALWNACEK Unmodified 1231.6019 0.60194245 2060 Q5SSM3;F6T1Y2 Arhgap44 Rho GTPase-activating protein 44 yes no 0 0 0 0 10 0 1 69.358 69.358 3 0.0011882 20194 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.781 51.061 68.816 62.798 102.99 73.23 80.494 86.181 65 65 102 74 83 83 1 1 1 1 1 1 5629.6 13312 2060 12832 31009 36099 36099 1 LQANTDLWNEYR Unmodified 1521.7212 0.72120596 2710 Q8VEH5 Epm2aip1 EPM2A-interacting protein 1 yes yes 0 0 0 0 6 0 1 66.247 66.247 2 0.015077 22961 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.314 37.45 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13313 2710 12833 31010 36100 36100 1 LQASSEGHEPQEDDDLAQR Unmodified 2123.9356 0.93556843 1014 F7ARZ1;Q3TI14;Q8VE22 Mrps23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 1.5 0.5 1 1 41.067 41.067 3 8.6209E-06 11555 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.325 56.537 29.925 29.792 20.046 28.509 47.852 0 28 28 19 28 47 0 1 1 1 2 2 0 3998.1 13314 1014 12834 31011;31012 36101;36102 36101 2 LQATNAR Unmodified 772.41915 0.4191507 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 0 1 29.656 29.656 2 0.028787 4990 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.251 23.95 39.416 31.03 21.545 28.74 30.827 38.562 37 32 23 28 32 37 1 1 1 1 1 1 2514.2 13315 728 12835 31013 36103 36103 1 LQAVEVVITHLAPGTK Unmodified 1674.9669 0.96685596 2959 Q9CR86 Carhsp1 Calcium-regulated heat stable protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 82.585 82.585 3;4 2.3867E-05 25695 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.751 64.427 29.702 75.503 113.64 39.975 144.1 67.387 28 74 111 38 139 65 1 2 3 1 2 2 11387 13316 2959 12836 31014;31015 36104;36105;36106 36105 3 LQAVLPPAVWNAEQQR Unmodified 1818.9741 0.97406661 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 10.8 1.48 1 1 1 1 77.609 77.609 2;3 9.5676E-08 23441 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.79 96.047 9.612 430.27 56 878.93 282.41 912.97 9 405 56 809 298 864 1 3 1 3 2 3 41209 13317 2691;1024 12837 31016;31017;31018;31019 36107;36108;36109;36110 36109 4 LQCVFLDPASAGIGYGR Unmodified 1822.9036 0.90360378 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 9 0 1 80.59 80.59 3 0.014206 27705 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.687 21.26 20.387 0 0 0 36.688 58.649 19 0 0 0 37 56 1 0 0 0 1 1 3282.2 13318 2773 12838 31020 36111 36111 1 LQDAFSAIGQNADLDLPQIAVVGGQSAGK Unmodified 2882.4774 0.47740045 118;1534 A0A0J9YUN4;A0A0J9YUE9;D6RH60;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 8.88 2.52 1 2 2 1 2 92.4 92.4 3;4 7.5487E-34 34243 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.1 89.193 198.81 100.31 77.452 190.86 32.479 79.023 186 102 75 177 32 75 5 4 2 5 1 3 161360 13319 118;1534 12839 31021;31022;31023;31024;31025;31026;31027;31028 36112;36113;36114;36115;36116;36117;36118;36119;36120 36114 9 LQDAFSALGQSCLLELPQIAVVGGQSAGK Unmodified 2956.5328 0.53280684 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 9.5 0.5 1 1 100.14 100.14 3;5 2.6484E-09 32635 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.112 54.159 12.876 0 0 0 14.402 7.051 12 0 0 0 14 7 1 0 0 0 1 1 648.59 13320 960 12840 31029;31030 36121;36122 36122 2 LQDAINILK Unmodified 1026.6073 0.6073454 2235 Q6PB66;F6V2A3 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes no 0 0 0 0 9 0 1 75.599 75.599 2 0.0093406 25205 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.228 19.665 0 59.584 0 69.693 71.893 67.238 0 56 0 65 74 65 0 1 0 1 1 1 6867.8 13321 2235 12841 31031 36123 36123 1 LQDDSVETVTSIEQAK Unmodified 1761.8632 0.86323833 2599 Q8K2I1 Fntb Protein farnesyltransferase subunit beta yes yes 0 0 0 0 3.5 0.5 1 1 67.351 67.351 3 4.7651E-05 24209 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.484 67.927 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2526 13322 2599 12842 31032;31033 36124;36125 36125 2 LQDEAYQVSLQG Unmodified 1349.6463 0.64630969 2531 Q8CFR5;A0A1Y7VL34;Q9D2N4 Dtna Dystrobrevin;Dystrobrevin alpha yes no 0 0 0 0 4 0 1 68.631 68.631 2 0.046329 24661 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.284 14.031 29.952 18.196 0 9.837 0 29.848 28 19 0 9 0 28 1 1 0 1 0 1 1696.4 13323 2531 12843 31034 36126 36126 1 LQDEFENR Unmodified 1049.4778 0.47778779 1022 F7CBP1;G3XA17;Q62448 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 3 0 1 49.225 49.225 2 0.011386 16326 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.649 57.769 60.088 0 0 0 0 49.036 56 0 0 0 0 46 1 0 0 0 0 1 3033.2 13324 1022 12844 31035 36127 36127 1 LQDELLLNK Unmodified 1084.6128 0.61282471 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 6 0 1 69.483 69.483 3 0.01569 24515 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.268 16.547 29.856 37.355 0 0 29.288 0 28 37 0 0 28 0 1 1 0 0 1 0 2375.7 13325 1669 12845 31036 36128 36128 1 LQDETNLR Unmodified 987.49852 0.49852324 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 42.969 42.969 2 0.0013051 12904 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142.79 63.644 624.21 503.41 341.41 175.1 411.75 834.65 586 514 339 167 408 794 5 4 3 2 3 5 166450 13326 1304 12846 31037;31038;31039;31040;31041 36129;36130;36131;36132;36133 36130 5 LQDFLAAFAPGDR Unmodified 1419.7147 0.71466402 283 A0A1D5RM97;E9Q8S5;Q3U214 Mast3 Microtubule-associated serine/threonine-protein kinase 3 yes no 0 0 0 0 10 0 1 92.036 92.036 2 0.00012317 29877 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.38 63.904 0 12.768 0 0 11.868 19.915 0 12 0 0 12 19 0 1 0 0 1 1 1358.5 13327 283 12847 31042 36134 36134 1 LQDGSVK Unmodified 745.39702 0.39701828 808 F7D432;E9PWE0;E0CYV0;P23506 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 9 4 1 1 42.432 42.432 2 0.027482 12468 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.294 1.5001 30.044 214.19 171.64 157.56 260.65 259.06 28 204 177 158 263 250 1 1 1 1 1 2 19833 13328 808 12848 31043;31044 36135;36136 36136 2 LQDPFSVYR Unmodified 1123.5662 0.56620887 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 13 0 1 66.85 66.85 2 0.044902 24425 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.032 26.44 208.36 173.21 0 0 208.43 205.12 195 176 0 0 206 198 1 1 0 0 1 1 24260 13329 2918 12849 31045 36137 36137 1 LQDRDTEIDDLK Unmodified 1459.7155 0.71545188 2310 Q80U23 Snph Syntaphilin yes yes 0 0 0 1 4.33 0.471 2 1 53.54 53.54 3;4 1.1034E-05 17927 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.33 57.528 144.72 70.057 120.98 93.418 54.285 0 139 74 120 93 56 0 2 1 1 1 1 0 8758.9 13330 2310 12850 31046;31047;31048 36138;36139;36140 36138 3 LQDVFNTVGADIIQLPQIVVVGTQSSGK Unmodified 2925.5811 0.58113724 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 0 10.6 1.36 1 2 1 1 109.11 109.11 3;4 7.0766E-25 34017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.44 88.275 23.54 64.941 19.274 23.512 59.781 68.023 22 62 19 23 59 65 2 4 3 5 5 5 31387 13331 815;2590 12851 31049;31050;31051;31052;31053 36141;36142;36143;36144;36145;36146;36147;36148 36145 8 LQDVTDDHIR Unmodified 1210.5942 0.59421454 864 E9PZC3;Q923D2;E9PZC4 Blvrb Flavin reductase (NADPH) yes no 0 0 0 0 3.5 0.5 1 1 45.317 45.317 3 5.9307E-06 14019 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.42 89.73 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 6006.7 13332 864 12852 31054;31055 36149;36150 36150 2 LQEAENR Unmodified 858.41954 0.41954463 643 B9EKI3 Tmf1 TATA element modulatory factor yes yes 0 0 0 0 9 4 1 1 19.228 19.228 3 0.0089745 2628 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.674 6.173 7.511 0 8.3414 16.899 4.9056 7.462 7 0 8 16 5 7 1 0 1 2 1 1 1322 13333 643 12853 31056;31057 36151;36152 36151 2 LQEAHLR Unmodified 865.477 0.47699993 2246 Q6PGE7 Slc6a7 Sodium-dependent proline transporter yes yes 0 0 0 0 5 0 1 34.874 34.874 3 0.049218 8671 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.418 24.495 39.464 0 39.835 0 27.631 48.248 37 0 37 0 28 46 1 0 1 0 1 1 2981 13334 2246 12854 31058 36153 36153 1 LQEALMHYK Unmodified 1131.5747 0.57466507 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 9 0 1 58.953 58.953 3 0.0023247 17355 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.067 38.688 78.794 53.318 56.996 0 58.576 0 74 56 56 0 56 0 1 1 1 0 1 0 5049.1 13335 2543 12855 31059 36154 36154 1 LQEALNLFK Unmodified 1074.6073 0.6073454 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 10 0 1 82.053 82.053 2 0.0048254 25921 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.533 44.085 88.217 81.147 72.779 44.346 84.781 0 83 83 74 46 83 0 1 1 1 1 1 0 10432 13336 1772 12856 31060 36155 36155 1 LQEALQPILAK Unmodified 1222.7285 0.72852317 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 8.5 0.5 1 1 76.229 76.229 2;3 0.013216 25341 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.198 32.619 118.41 0 115.96 103.88 36.927 0 111 0 112 102 37 0 2 0 2 2 1 0 89032 13337 1854 12857 31061;31062 36156;36157 36157 2 LQEAYYIFQELADK Unmodified 1729.8563 0.85630246 762 F6XIG5;D3Z315;F6YFR7;O89079 Cope Coatomer subunit epsilon yes no 0 0 0 0 9 0 1 99.899 99.899 3 0.0027074 35607 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.265 31.942 0 29.478 18.789 0 19.874 0 0 28 19 0 19 0 0 1 1 0 1 0 3074.7 13338 762 12858 31063 36158 36158 1 LQEEERER Unmodified 1087.5258 0.52580062 1782 P63276 Rps17 40S ribosomal protein S17 yes yes 0 0 0 1 2 0 1 27.492 27.492 3 0.0098311 5984 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.749 37.381 0 58.346 74.037 56.795 0 0 0 56 74 56 0 0 0 1 1 1 0 0 7740.4 13339 1782 12859 31064 36159 36159 1 LQEESDLELAK Unmodified 1273.6402 0.64016167 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 4.5 0.5 1 1 61.741 61.741 3 0.0026273 21756 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.13 29.831 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 0 5248.2 13340 1972 12860 31065;31066 36160;36161 36160 2 LQEETGAK Unmodified 874.43961 0.43961137 2085 Q60749;Q9WU01 Khdrbs1;Khdrbs2 KH domain-containing, RNA-binding, signal transduction-associated protein 1;KH domain-containing, RNA-binding, signal transduction-associated protein 2 yes no 0 0 0 0 8.5 4.5 1 1 40.781 40.781 2 0.011398 11919 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.598 19.623 99.046 61.262 133.51 66.699 75.098 166.29 93 65 130 65 74 158 1 1 2 1 1 2 70245 13341 2085 12861 31067;31068 36162;36163 36162 2 LQEGEEGTR Unmodified 1017.4727 0.47270242 497 A2ANL9;Q9WTS4 Tenm1 Teneurin-1;Ten-1 intracellular domain;Teneurin C-terminal-associated peptide yes no 0 0 0 0 2 0 1 32.478 32.478 2 0.0020506 8234 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.883 33.843 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13342 497 12862 31069 36164 36164 1 LQEGYDHSYYFIATFIADHIR Unmodified 2558.223 0.22302366 1122 H3BKH6;Q9R0P3;H3BK43 Esd S-formylglutathione hydrolase yes no 0 0 0 0 8 0 1 90.192 90.192 4 1.2422E-06 32706 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.735 39.136 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1837.7 13343 1122 12863 31070 36165 36165 1 LQEIDVFNNQLK Unmodified 1459.7671 0.76709352 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9;Q6NZJ5 Itsn1 Intersectin-1 yes no 0 0 0 0 7 0 1 75.548 75.548 3 0.00068899 26478 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.924 31.696 29.518 36.417 57.486 17.341 0 0 28 37 56 19 0 0 1 1 1 1 0 0 2824.4 13344 876 12864 31071 36166 36166 1 LQEIQLVGGQLAVVEPYAFR Unmodified 2229.2158 0.21575344 563 A9DA50;Q9D1T0 Lingo1 Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 yes no 0 0 0 0 8 0 1 90.93 90.93 3 1.8534E-07 33015 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.03 61.99 0 0 9.738 0 0 14.924 0 0 9 0 0 14 0 0 1 0 0 1 1352.1 13345 563 12865 31072 36167 36167 1 LQEKEDLQELNDR Unmodified 1628.8006 0.8005785 1580 P48678;D3YUF7 Lmna Prelamin-A/C;Lamin-A/C yes no 0 0 0 1 4 0 1 53.297 53.297 3 0.021139 17902 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.467 30.076 0 0 0 80.882 0 69.29 0 0 0 74 0 65 0 0 0 1 0 1 5568.9 13346 1580 12866 31073 36168 36168 1 LQELDAASK Unmodified 973.50803 0.50802529 2197 Q6IRU5;F7BHJ0 Cltb Clathrin light chain B yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 55.143 55.143 2;3 0.00013138 17833 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.53 64.159 614.8 468.07 510.6 393.57 599.08 655.79 578 485 512 392 607 630 5 4 3 3 4 4 77220 13347 2197 12867 31074;31075;31076;31077;31078 36169;36170;36171;36172;36173 36170 5 LQELEGAVK Unmodified 985.54441 0.5444108 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 6 0 1 63.066 63.066 2 0.0021563 21560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.499 29.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13348 1974 12868 31079 36174 36174 1 LQELEGTYEENER Unmodified 1608.7267 0.72674485 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 3 0 1 58.995 58.995 3 8.3707E-05 20844 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.703 63.107 49.225 26.473 0 20.252 27.359 29.067 46 28 0 19 28 28 1 1 0 1 1 1 4059.1 13349 2123 12869 31080 36175 36175 1 LQELQTVYDTVLQK Unmodified 1676.8985 0.89850163 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 9 0 1 89.084 89.084 3 0.050886 31464 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.022 16.698 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13350 305 12870 31081 36176 36176 1 LQELSAEER Unmodified 1073.5353 0.53530267 2999 Q9CZ30 Ola1 Obg-like ATPase 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 48.841 48.841 2 0.00051912 15675 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.79 56.285 148.2 97.256 76.501 0 209.71 76.482 139 102 74 0 203 74 2 2 1 0 2 1 24133 13351 2999 12871 31082;31083;31084 36177;36178;36179 36177 3 LQEQTTLDTEDGEGLQQTLR Unmodified 2274.0975 0.097548378 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 3 0 1 63.107 63.107 3 4.0846E-12 22673 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.063 67.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13352 2559 12872 31085 36180 36180 1 LQESLGQSAAIIAALVK Unmodified 1710.988 0.98798534 339 A0A1Y7VK76;A0A1Y7VM96;Q5RJG7 Ispd Isoprenoid synthase domain-containing protein yes no 0 0 0 0 11 0.816 1 1 1 97.988 97.988 3 1.9265E-06 28000 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.3 88.102 0 48.944 0 25.139 19.874 14.924 0 46 0 23 19 14 0 1 0 1 1 1 8164.1 13353 339 12873 31086;31087;31088 36181;36182;36183 36183 3 LQESLMSVAPR Unmodified 1229.6438 0.64380726 1702 P61922;Q3TUE8;F7C9G3;F6RN86 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 64.16 64.16 2 0.00081034 21146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.313 53.18 48.863 44.894 45.204 36.543 63.994 67.464 46 46 46 37 65 65 1 1 1 1 1 1 3988.8 13354 1702 12874 31089;31090 36184;36185 36184 2 LQEVASFITTR Unmodified 1263.6823 0.68230126 2564 Q8JZL3 Thtpa Thiamine-triphosphatase yes yes 0 0 0 0 9 0 1 75.64 75.64 2 0.029472 25270 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.252 17.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13355 2564 12875 31091 36186 36186 1 LQEVECEEQR Unmodified 1318.5823 0.58232922 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 0 2.5 0.5 1 1 44.863 44.863 2 1.5349E-05 14206 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.618 64.931 49.007 25.869 36.992 27.897 26.678 38.681 46 28 37 28 28 37 1 1 1 1 1 1 5237.9 13356 2207 12876 31092;31093 36187;36188 36188 2 LQEVEIR Unmodified 885.49198 0.4919813 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 5 0 1 51.218 51.218 2 0.024672 16597 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.54 24.484 88.547 0 86.055 74.184 83.41 0 83 0 83 74 83 0 1 0 1 1 1 0 10956 13357 3402 12877 31094 36189 36189 1 LQEVFGCAIR Unmodified 1191.607 0.60702783 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 9 0 1 68.683 68.683 2 0.035299 22023 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.649 22.528 88.091 71.084 102.39 73.387 74.033 0 83 74 102 74 74 0 1 1 1 1 1 0 4379.9 13358 3025 12878 31095 36190 36190 1 LQEVIETLLSLEK Unmodified 1513.8603 0.86032521 3097 Q9D8W5;Q3TRH2 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 11.5 1.12 1 1 1 1 111.89 111.89 3 1.2747E-07 36142 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.98 78.108 27.853 14.585 38.824 6.6645 24.26 28.439 26 14 37 7 24 27 2 2 4 1 2 2 13494 13359 3097 12879 31096;31097;31098;31099 36191;36192;36193;36194;36195;36196 36194 6 LQEVPHEGPMCDLLWSDPDDR Unmodified 2508.105 0.10495872 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 7 3.54 1 1 1 1 73.963 73.963 3 3.7379E-11 27785 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.622 85.223 29.739 28.761 43.938 28.428 41.289 59.179 28 28 42 28 42 56 2 2 2 2 2 2 24504 13360 1731;1787 12880 31100;31101;31102;31103 36197;36198;36199;36200;36201 36201 5 LQEVSAHLVR Unmodified 1150.6459 0.64585618 2437 Q8BNU0;D3Z3J0 Armc6 Armadillo repeat-containing protein 6 yes no 0 0 0 0 7 0 1 50.004 50.004 3 0.038719 14439 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.218 16.15 0 67.939 73.021 66.693 0 0 0 65 74 65 0 0 0 1 1 1 0 0 3152.3 13361 2437 12881 31104 36202 36202 1 LQEYFSVAAGAGDH Unmodified 1463.6681 0.66810776 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 0 6.5 0.5 1 1 71.924 71.924 3 0.0035646 24764 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.155 36.802 69.39 27.179 36.549 38.263 19.874 39.442 65 28 37 37 19 37 2 1 1 1 1 1 5965.1 13362 3089 12882 31105;31106 36203;36204 36204 2 LQEYNIPGVIQSAIGWK Unmodified 1915.0203 0.020348097 2854 Q99L43;A2AMQ5;F6S4G2 Cds2 Phosphatidate cytidylyltransferase 2;Phosphatidate cytidylyltransferase yes no 0 0 0 0 10 0.816 1 1 1 93.104 93.104 3 3.5682E-06 33178 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.464 46.735 20.292 18.848 29.041 37.666 55.509 38.924 19 19 28 37 56 38 1 1 1 2 2 2 15914 13363 2854 12883 31107;31108;31109 36205;36206;36207 36205 3 LQEYNVGGK Unmodified 1006.5084 0.50835964 1970 Q3UF95;Q9Z1R2;G3UYQ2;A0A1B0GX81;G3UZT6;G3UXT8;G3UYZ0;G3V013;S4R183 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 7 0 1 51.588 51.588 2 0.0010257 15268 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.087 59.327 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13364 1970 12884 31110 36208 36208 1 LQEYTQTILR Unmodified 1263.6823 0.68230126 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 8.75 2.49 2 1 1 65.497 65.497 2;3 0.0015409 21837 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.672 35.781 217.74 326.82 193.38 264.85 507.08 382.08 204 324 194 259 507 372 2 3 2 2 2 3 40869 13365 1892 12885 31111;31112;31113;31114 36209;36210;36211;36212 36210 4 LQFAPFNSALDVGFWHELTQK Unmodified 2447.2274 0.22738076 52 S4R2D5;S4R2T5;A0A0A0MQN4;Q9D906;S4R2P7;S4R1T0;S4R1K1;S4R1U3;S4R1W9;S4R1N8 Atg7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 0 0 0 0 10 0 1 95.6 95.6 3 0.00039792 31220 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.164 35.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13366 52 12886 31115 36213 36213 1 LQFHNVKPECLDAYNK Unmodified 1974.9622 0.96218129 1238 O55126;Q7TMG8;A0A0G2JEV1 Gbas Protein NipSnap homolog 2 yes no 0 0 0 1 7.5 0.5 1 1 57.989 57.989 4 1.164E-05 18416 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.632 63.067 236.03 115.17 268.01 92.734 107.89 283.68 222 120 259 93 111 269 2 1 2 1 1 2 20232 13367 1238 12887 31116;31117 36214;36215 36214 2 LQFHNVKPECLDAYNK Deamidation (N) 1975.9462 0.94619688 1238 O55126;Q7TMG8;A0A0G2JEV1 Gbas Protein NipSnap homolog 2 yes no 0 1 0 1 13 0 1 56.45 56.45 4 0.0011928 19471 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.237 36.917 190.72 0 226.32 217.12 233.42 222.53 179 0 219 215 240 215 1 0 1 1 1 1 8525 13368 1238 12887 31118 36216 36216 338 1 LQGAEHGKK Unmodified 966.52468 0.52467841 282 Q6PDL0;A0A1D5RM94 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 1 7 0 1 35.136 35.136 4 0.010543 7616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.416 23.866 98.79 90.77 90.94 83.991 69.55 116.34 93 93 93 83 74 111 1 1 1 1 1 1 1588.9 13369 282 12888 31119 36217 36217 1 LQGEIAHVK Unmodified 993.56073 0.56072956 662 CON__P35908v2;CON__P35908 yes no 0 0 0 0 8 0 1 47.181 47.181 3 0.030809 12582 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.863 24.534 49.176 36.052 0 0 84.521 66.878 46 37 0 0 83 65 1 1 0 0 1 1 3029 + 13370 662 12889 31120 36218 36218 1 LQGEVQR Unmodified 828.44537 0.44536545 2399 Q8BH80;Q9QY76 Vapb Vesicle-associated membrane protein-associated protein B yes no 0 0 0 0 5 0 1 34.643 34.643 2 0.02731 8566 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.195 16.421 79.402 0 0 0 93.965 96.457 74 0 0 0 93 93 1 0 0 0 1 1 5840.7 13371 2399 12890 31121 36219 36219 1 LQGILADLR Unmodified 997.59203 0.59202969 1655 P58404;V9GXI9 Strn4 Striatin-4 yes no 0 0 0 0 9 0 1 76.038 76.038 2 0.0075235 25504 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.516 23.967 0 0 60.592 0 56.948 47.411 0 0 56 0 56 46 0 0 1 0 1 1 10223 13372 1655 12891 31122 36220 36220 1 LQGLKPNSLYYFR Unmodified 1597.8617 0.86166261 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;G3UYR6 Ptprd Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 0 0 0 1 1 0 1 68.375 68.375 3 0.010957 23137 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.454 37.101 29.523 36.431 56.627 36.597 24.922 78.173 28 37 56 37 28 74 1 1 1 1 1 1 3415.7 13373 642 12892 31123 36221 36221 1 LQGPQTAR Unmodified 869.47191 0.47191456 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 8.67 3.09 1 1 1 33.451 33.451 2 0.0053994 6985 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.5 76.529 24.279 105.08 156.99 144.92 165.89 62.173 23 102 157 144 167 60 1 2 3 3 3 2 26845 13374 1368 12893 31124;31125;31126 36222;36223;36224 36223 3 LQGPQTSAEVYR Unmodified 1347.6783 0.67827852 1994 Q3ULJ0;D3Z0L6 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes no 0 0 0 0 8 3.56 1 1 1 47.089 47.089 2 2.278E-14 14660 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.08 97.93 69.335 38.477 36.373 58.703 75.183 87.399 65 38 37 56 75 84 2 1 1 2 2 3 20588 13375 1994 12894 31127;31128;31129 36225;36226;36227 36225 3 LQGSCTSCPSSIITLK Unmodified 1750.8594 0.8593557 122 Q9QZ23;A0A0N4SUH8 Nfu1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial yes no 0 0 0 0 13 0 1 66.077 66.077 3 0.036679 24119 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.274 14.67 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13376 122 12895 31130 36228 36228 1 LQGVLDSTLNSK Unmodified 1273.6878 0.68778057 2301 Q80TJ1;K4DI76;J3QJW3 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 10 2.16 1 1 1 70.115 70.115 3 1.1543E-08 22694 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.24 76.919 0 156.08 203.53 166.38 127.68 273.52 0 148 194 158 130 260 0 2 2 2 2 3 41269 13377 2301 12896 31131;31132;31133 36229;36230;36231 36230 3 LQHAAELIK Unmodified 1021.592 0.59202969 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 7 0 1 52.457 52.457 3 0.0027165 15672 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.552 43.453 0 48.944 0 48.73 82.281 66.942 0 46 0 46 83 65 0 1 0 1 1 1 3408.1 13378 3327 12897 31134 36232 36232 1 LQHGSILGFPK Unmodified 1195.6713 0.67134264 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 0 8.2 3.66 1 1 2 1 60.768 60.768 2;3 3.0924E-08 20317 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.24 76.916 334.12 396.68 382.39 340.88 291.03 157.77 314 400 391 332 289 148 2 4 4 3 1 2 230810 13379 1458 12898 31135;31136;31137;31138;31139 36233;36234;36235;36236;36237 36233 5 LQHPDMLVTK Unmodified 1180.6274 0.62742892 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 8 0 1 52.6 52.6 3 0.0010489 15043 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.695 44.467 88.238 61.778 85.655 0 77.404 0 83 65 83 0 74 0 1 1 1 0 1 0 7134.6 13380 526 12899 31140 36238 36238 1 LQIDEQLR Unmodified 1013.5506 0.55055881 92;783;2218 E9QAS9;E9QAT0;D3Z6U8;E9QNF5;Q6AXB7;E9QAS8;P35922;A0A0G2JEP0;Q61584;A0A0H2UH27;Q6P5B5;Q9WVR4 Fmr1;Fxr1;Fxr2 Fragile X mental retardation protein 1 homolog;Fragile X mental retardation syndrome-related protein 1;Fragile X mental retardation syndrome-related protein 2 no no 0 0 0 0 5 0 1 55.168 55.168 2 0.015105 18458 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.213 26.253 49.128 45.631 0 0 75.098 67.147 46 46 0 0 74 65 1 1 0 0 1 1 4592.2 13381 783;92;2218 12900 31141 36239 36239 1 LQIELGK Unmodified 799.48035 0.48035398 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 9 0 1 63.581 63.581 2 0.03624 19616 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.296 0 187.35 163.17 112.78 141.96 172.68 173.09 176 167 120 139 177 167 1 1 1 1 1 1 6271.3 13382 1379 12901 31142 36240 36240 1 LQIENEAAKDEVK Unmodified 1485.7675 0.76748745 1481 P28738;A2ARD4 Kif5c Kinesin heavy chain isoform 5C yes no 0 0 0 1 6 0 1 53.523 53.523 3 3.3653E-08 17022 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.944 66.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13383 1481 12902 31143 36241 36241 1 LQILHIHTAR Unmodified 1200.7091 0.70912513 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 9.5 3.95 1 2 1 1 1 46.521 46.521 2;3;4 6.8427E-07 10142 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.23 97.871 362.78 363.68 859.74 292.6 596.93 203.16 342 371 825 296 582 196 4 4 6 5 3 1 318930 13384 1554 12903 31144;31145;31146;31147;31148;31149 36242;36243;36244;36245;36246;36247;36248 36246 7 LQILSLR Unmodified 841.53854 0.53853756 527 A2AUR7;Q9D031;Q01730 Rsu1 Ras suppressor protein 1 yes no 0 0 0 0 12 0 1 68.374 68.374 2 0.04914 17162 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.774 15.802 59.053 72.879 112.19 72.688 80.153 96.851 56 74 111 74 83 93 1 1 1 1 1 1 13492 13385 527 12904 31150 36249 36249 1 LQINELSGK Unmodified 1000.5553 0.55530983 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 8 0 1 60.48 60.48 2 0.0026318 18843 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.771 25.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13386 2208 12905 31151 36250 36250 1 LQIQVDEK Unmodified 971.52876 0.52876073 741 D3Z0K9;D3Z7W0;Q9D7P6 Iscu Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes no 0 0 0 0 6 0 1 57.131 57.131 2 0.025619 18727 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.92 10.655 39.701 0 0 0 56.251 67.685 37 0 0 0 56 65 1 0 0 0 1 1 3434.8 13387 741 12906 31152 36251 36251 1 LQISHEAAACITALR Unmodified 1652.8668 0.86682434 16 A0A087WPL5;E9QNN1 Dhx9 yes no 0 0 0 0 8 0 1 59.99 59.99 3 0.002786 18526 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.343 29.765 20.027 0 60.491 0 0 69.29 19 0 56 0 0 65 1 0 1 0 0 1 4248.7 13388 16 12907 31153 36252 36252 1 LQIWDTAGQESFR Unmodified 1549.7525 0.75250609 1617 P53994;Q3TEG7;P59279 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 0 9.33 2.62 1 1 1 71.238 71.238 3 0.0001148 24532 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.483 50.692 34.157 38.774 113.32 96.201 58.71 112.39 32 37 111 93 60 107 1 1 3 2 2 3 47180 13389 1617 12908 31154;31155;31156 36253;36254;36255 36253 3 LQKEEEER Unmodified 1059.5197 0.51965261 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 1 5 0 1 34.207 34.207 3 0.060763 8375 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.608 16.587 98.512 109.42 121.92 92.101 121.29 0 93 111 123 93 120 0 1 1 1 1 1 0 11894 13390 2301;365 12909 31157 36256 36256 1 LQKPNAAIR Unmodified 1009.6033 0.60326308 2856 Q99L47;F8WJK8 St13 Hsc70-interacting protein yes no 0 0 0 1 10.5 0.5 1 1 42.187 42.187 3 0.00050612 8610 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.99 73.39 265.11 392.65 328.63 226.25 324.48 328.66 250 391 318 207 321 317 1 2 1 1 1 1 85882 13391 2856 12910 31158;31159 36257;36258 36257 2 LQLDDDIDGEAR Unmodified 1358.6314 0.6313879 2527 Q8CE50 Snx30 Sorting nexin-30 yes yes 0 0 0 0 3 0 1 59.442 59.442 2 7.043E-13 21009 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 129.34 84.206 29.728 17.572 38.242 37.479 36.32 19.218 28 19 38 37 37 19 1 1 1 1 1 1 2651.8 13392 2527 12911 31160 36259 36259 1 LQLDSPEDAEFIVAK Unmodified 1673.8512 0.85121708 1378 P14685 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 0 9 4 1 1 78.739 78.739 3 7.6582E-05 29588 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.207 69.65 58.575 44.388 36.285 17.746 45.662 47.733 55 46 37 19 46 46 1 1 1 1 1 1 3508.3 13393 1378 12912 31161;31162 36260;36261 36260 2 LQLEETDHQK Unmodified 1239.6095 0.60953025 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 44.084 44.084 3 0.00035414 13107 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.342 34.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13394 3266 12913 31163 36262 36262 1 LQLEIDQK Unmodified 985.54441 0.5444108 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 7 0 1 62.228 62.228 2 0.014258 20296 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.744 22.21 29.049 84.759 95.394 0 55.225 97.562 28 83 93 0 56 93 1 1 1 0 1 1 7945.3 13395 1207 12914 31164 36263 36263 1 LQLEQIQQLQQQLQLQLEEQK Unmodified 2605.4075 0.40752997 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 10 2.16 1 1 1 93.659 93.659 3;4 0.00033657 33951 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.971 33.651 20.244 28.427 0 14.862 62.077 19 19 28 0 14 60 19 1 1 0 1 2 1 10127 13396 1275 12915 31165;31166;31167 36264;36265;36266 36264 3 LQLEYCNLTATSCEPLASVLR Unmodified 2437.1981 0.19813082 2741 Q91VI7;A0A1B0GSG5;A0A1B0GRG4 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 8 0 1 85.089 85.089 3 0.0071854 30470 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.491 23.208 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13397 2741 12916 31168 36267 36267 1 LQLGIHGLIPPCFLSQDVQLLR Unmodified 2516.3937 0.39373458 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 12 0 1 91.093 91.093 3 0.044263 25955 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 28.765 15.916 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1012.3 13398 2432 12917 31169 36268 36268 1 LQLLEPFDK Unmodified 1101.607 0.60701105 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 79.927 79.927 2;3 0.0009789 30721 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.67 41.542 148.12 116.47 148.94 93.348 0 88.478 139 120 148 92 0 83 2 2 3 2 0 1 30861 13399 2843 12918 31170;31171;31172;31173 36269;36270;36271;36272 36272 4 LQLLEPFDKWDGK Unmodified 1587.8297 0.82969378 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 10.6 1.36 1 2 1 1 81.58 81.58 3;4 0.00026266 25765 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.632 56.696 453 216.49 603.94 503.13 450.41 345.07 426 223 593 501 453 328 4 2 5 5 3 3 63134 13400 2843 12919 31174;31175;31176;31177;31178 36273;36274;36275;36276;36277 36274 5 LQLLQDLQEFFR Unmodified 1548.83 0.83002813 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 11.5 0.5 1 1 106.04 106.04 2 6.363E-13 34977 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.84 95.117 21.594 5.6397 5.8286 6.2106 0 0 21 6 6 6 0 0 2 1 1 1 0 0 4005.8 13401 965 12920 31179;31180 36278;36279;36280 36278 3 LQLLSLVTK Unmodified 1013.6485 0.64848194 724 D3YYP5;E9Q5V3;Q9Z2D3;E9Q308 Dfna5 Non-syndromic hearing impairment protein 5 homolog yes no 0 0 0 0 1 0 1 84.721 84.721 2 0.016815 29847 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.897 28.234 9.5583 19.571 0 20.239 28.056 8.7934 9 19 0 19 28 9 1 1 0 1 1 1 1367.1 13402 724 12921 31181 36281 36281 1 LQLNIVEMK Unmodified 1086.6107 0.61071622 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 9 0 1 73.561 73.561 2 0.00088297 24305 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.331 32.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13403 2980 12922 31182 36282 36282 1 LQLNIVEMKDENATLDGGDVLFTGR Unmodified 2747.38 0.37999459 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 1 6 0 1 84.591 84.591 4 0.004047 31514 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.756 29.134 0 0 38.39 36.906 66.295 0 0 0 37 37 65 0 0 0 1 1 1 0 2874.3 13404 2980 12923 31183 36283 36283 1 LQLNIVEMKDENATLDGGDVLFTGR Deamidation (N) 2748.364 0.36401017 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 1 0 1 7 0 1 84.596 84.596 3 5.6323E-05 30806 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.746 30.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13405 2980 12923 31184 36284 36284 1035 1 LQLPVFLQQMQNPESLSILTNPR Unmodified 2665.4262 0.42615692 2883 Q99NB8 Ubqln4 Ubiquilin-4 yes yes 0 0 0 0 12 0 1 99.318 99.318 3 2.63E-12 28340 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.807 55.409 0 6.384 0 0 3.138 0 0 6 0 0 3 0 0 1 0 0 1 0 981.32 13406 2883 12924 31185 36285 36285 1 LQLPVWEYK Unmodified 1174.6386 0.63864553 1185 O35286;A0A0G2JG10;Q497W9 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 9.5 0.5 1 1 78.266 78.266 2 0.006591 24239 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.233 17.85 29.904 27.776 0 40.441 0 39.442 28 28 0 37 0 37 1 1 0 1 0 1 2716.2 13407 1185 12925 31186;31187 36286;36287 36287 2 LQLSEEEAK Unmodified 1045.5292 0.52915466 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 4.5 0.5 1 1 52.642 52.642 2 0.00045585 17194 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.48 72.313 0 67.916 74.435 34.983 54.313 77.334 0 65 74 37 56 74 0 1 1 1 1 1 5650.4 13408 728 12926 31188;31189 36288;36289 36289 2 LQLSEFVTVFEK Unmodified 1438.7708 0.77078192 261 A0A1B0GSA5;Q80Y98 Ddhd2 Phospholipase DDHD2 yes no 0 0 0 0 9 0 1 92.291 92.291 3 0.015702 32764 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.761 29.342 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 860.51 13409 261 12927 31190 36290 36290 1 LQLTDLLIKPVQR Unmodified 1535.9399 0.93991293 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 1 11.5 0.5 1 1 76.929 76.929 3 0.00026131 20573 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.809 57.051 69.745 0 246.39 175.04 140.62 0 65 0 232 176 139 0 1 0 1 2 1 0 26804 13410 1894 12928 31191;31192 36291;36292 36292 2 LQLVEAGLVECLLEIVQQK Unmodified 2181.2079 0.20789087 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 11.3 1.25 1 1 1 122.47 122.47 3;4 2.57E-14 45546 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.22 105.14 0 6.2818 6.1151 0 0 0 0 6 6 0 0 0 0 1 1 0 0 0 3569 13411 919;937 12929 31193;31194;31195 36293;36294;36295 36295 3 LQLVLLPPALFIPAVESEAQR Unmodified 2303.3253 0.32530389 2463 Q8BVG4 Dpp9 Dipeptidyl peptidase 9 yes yes 0 0 0 0 6.5 5.5 1 1 108.48 108.48 3 2.3456E-07 29569 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.045 55.361 4.2827 1.8392 0 3 0 9.132 4 2 0 3 0 9 1 1 0 1 0 2 4048.1 13412 2463 12930 31196;31197 36296;36297;36298 36297 3 LQLVQAGQAEK Unmodified 1183.6561 0.65608651 839 Q8C0C7;E9PWY9 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 0 9 0 1 56.878 56.878 3 0.038357 16395 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.113 15.731 0 87.224 65.097 0 106.69 0 0 83 65 0 102 0 0 1 1 0 1 0 4990 13413 839 12931 31198 36299 36299 1 LQLWDTAGQER Unmodified 1315.6521 0.65206377 1515;1697 P35279;D3YV69;Q8BHD0;P61294;A0A1L1SRS6 Rab6a;Rab39a;Rab6b Ras-related protein Rab-6A;Ras-related protein Rab-39A;Ras-related protein Rab-6B no no 0 0 0 0 8.25 1.98 1 2 3 1 1 63.647 63.647 2;3 6.6071E-14 20739 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 157.14 0 508.1 418.9 689.28 607.54 884.85 607.5 477 426 673 602 885 586 6 6 6 8 8 6 360190 13414 1515;1697 12932 31199;31200;31201;31202;31203;31204;31205;31206 36300;36301;36302;36303;36304;36305;36306;36307;36308;36309 36303 10 LQLYGPTNIAPIIQK Unmodified 1667.961 0.9610423 2428 Q9D6C8;Q8BLR2;A0A1L1SU07 Cpne4 Copine-4 yes no 0 0 0 0 10.5 0.5 1 1 79.969 79.969 3 7.549E-06 25012 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105 83.751 49.074 56.275 0 60.018 63.245 122.89 46 56 0 56 65 121 1 1 0 1 1 2 31583 13415 2428 12933 31207;31208 36310;36311 36310 2 LQLYYPPTKPR Unmodified 1374.766 0.76597131 290 A0A1L1SQE2;E9QP54;Q8K3E5 Ahi1 Jouberin yes no 0 0 0 1 12 0 2 58.435 58.435 3;4 0.0017121 13340 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.124 43.163 29.783 0 121.96 76.317 88.675 57.166 28 0 116 78 88 56 1 0 2 2 1 1 5794.5 13416 290 12934 31209;31210 36312;36313 36312 2 LQMADQIAR Unmodified 1044.5386 0.53861391 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 7.5 0.5 1 1 52.946 52.946 2 0.0044858 15966 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.605 32.87 0 39.368 0 80.882 0 78.884 0 37 0 74 0 74 0 1 0 1 0 1 2835.8 13417 2301;365 12935 31211;31212 36314;36315 36314 2 LQNELDNVSTLLEEAEK Unmodified 1943.9688 0.96876604 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 4 0 1 91.257 91.257 3 0.00022485 33905 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.383 31.53 0 7.448 0 0 0 6.396 0 7 0 0 0 6 0 1 0 0 0 1 613.13 13418 1974 12936 31213 36316 36316 1 LQNELDNVSTLLEEAEKK Unmodified 2072.0637 0.063729054 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 5 0 1 86.48 86.48 4 0.033243 33020 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.883 15.577 39.564 27.124 0 20.767 0 39.442 37 28 0 19 0 37 1 1 0 1 0 1 1784.8 13419 1974 12937 31214 36317 36317 1 LQNLDALTNLTVLSVQSNR Unmodified 2098.1382 0.1382314 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 9.5 0.5 1 1 87.922 87.922 2;3 1.4212E-14 30950 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.54 102.29 39.701 0 0 0 29.288 0 37 0 0 0 28 0 1 0 0 0 1 0 14756 13420 1995 12938 31215;31216 36318;36319 36318 2 LQNLDALTNLTVLSVQSNR Deamidation (N) 2099.1222 0.12224699 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 1 0 0 13 0 1 87.61 87.61 3 0.00099056 34531 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.425 32.191 0 0 0 39.747 36.876 0 0 0 0 37 37 0 0 0 0 1 1 0 4705.4 13421 1995 12938 31217 36320 36320 796 1 LQNLQLQPGK Unmodified 1137.6506 0.6506072 1501 P32020 Scp2 Non-specific lipid-transfer protein yes yes 0 0 0 0 9.5 0.5 1 1 59.677 59.677 2;3 4.2185E-05 17782 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.72 45.82 0 0 45.423 97.633 69.583 97.152 0 0 46 93 74 93 0 0 1 1 1 1 9397.7 13422 1501 12939 31218;31219 36321;36322 36321 2 LQNNNVYTIAK Unmodified 1276.6776 0.67755023 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 9.25 2.28 1 1 1 1 56.95 56.95 2;3 8.9554E-14 19448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 155.53 119.11 217.35 232.68 169.75 306.83 192.85 319.17 204 232 167 287 195 303 3 3 2 3 3 3 67769 13423 3123 12940 31220;31221;31222;31223 36323;36324;36325;36326;36327 36327 5 LQNNNVYTIAK Deamidation (N) 1277.6616 0.66156582 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 1 0 0 9.4 2.94 3 2 60.947 60.947 2;3 8.6294E-12 19692 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.3 93.113 139.07 161.44 56.097 246.63 191.52 174.15 130 157 56 232 195 167 3 3 1 5 4 3 24118 13424 3123 12940 31224;31225;31226;31227;31228 36328;36329;36330;36331;36332 36328 1089;1090;1091 5 LQNPDLDSEALLALPLLQLVQK Unmodified 2430.3734 0.37337629 1168 O08914 Faah Fatty-acid amide hydrolase 1 yes yes 0 0 0 0 9 0 1 110.43 110.43 4 1.9435E-09 37616 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.19 45.042 0 0 0 19.674 0 12.792 0 0 0 18 0 12 0 0 0 1 0 1 2581.2 13425 1168 12941 31229 36333 36333 1 LQNPSDR Unmodified 828.40898 0.40897995 3343 Q9WV55 Vapa Vesicle-associated membrane protein-associated protein A yes yes 0 0 0 0 5.5 0.5 1 1 32.001 32.001 2 0.024851 6934 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.33 38.18 83.965 76.157 70.171 69.141 111.31 47.186 79 78 69 69 111 46 2 2 1 2 2 1 15471 13426 3343 12942 31230;31231 36334;36335 36335 2 LQNQQNGQR Deamidation (N) 1085.5214 0.52138394 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q80X52;E9Q579;A0A0J9YUX4;A0A0J9YUJ4 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 1 0 0 7 3.54 1 1 1 1 26.765 26.765 2 0.00028305 4972 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.04 110.88 149.35 114.14 74.005 135.74 103.3 120.71 140 116 74 130 106 116 3 3 1 4 2 3 25223 13427 3075 12943 31232;31233;31234;31235 36336;36337;36338;36339 36337 1069 4 LQNVQIALDFLK Unmodified 1400.8028 0.80275075 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;F6XCT0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 11 0 1 91.212 91.212 2 0.0076317 29248 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.699 37.797 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 1659.3 13428 581 12944 31236 36340 36340 1 LQPALWPFPR Unmodified 1223.6815 0.6815134 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 6.25 5.26 2 1 1 81.198 81.198 2;3 2.8416E-05 22256 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.31 84.591 179.96 36.575 166.89 137.94 193.98 183.97 168 37 158 130 194 177 4 2 4 4 4 3 45938 13429 1420 12945 31237;31238;31239;31240 36341;36342;36343;36344;36345;36346 36346 6 LQPASVALR Unmodified 953.56581 0.56581494 553 D3Z5I6;A4GZ26;E9QAD8;Q5DU25;D3Z6V7 Iqsec2 IQ motif and SEC7 domain-containing protein 2 yes no 0 0 0 0 8 0 1 51.62 51.62 2 0.0014457 14645 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102 33.215 119.35 95.256 57.91 70.232 112.6 130.04 112 98 56 65 115 125 2 2 1 1 2 2 6532.9 13430 553 12946 31241 36347;36348 36348 2 LQPDELSPK Unmodified 1025.5393 0.53932542 1828 Q3UU93;P80560 Ptprn2 Receptor-type tyrosine-protein phosphatase N2 yes no 0 0 0 0 5 0 1 55.681 55.681 3 0.032098 18725 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.318 15.591 20.244 28.427 0 39.398 55.466 37.859 19 28 0 37 56 37 1 1 0 1 1 1 1805.1 13431 1828 12947 31242 36349 36349 1 LQPEGQTSGSSR Unmodified 1245.5949 0.59494282 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 4.5 0.5 1 1 32.313 32.313 2 0.00093035 7924 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.548 53.331 9.6018 0 29.834 9.2842 0 20.254 9 0 28 9 0 19 1 0 2 1 0 1 4075.9 13432 1669 12948 31243;31244 36350;36351 36350 2 LQPGPVGLLDTIEDLGDEPALSLR Unmodified 2517.3326 0.33263369 2681 Q8VCD6 Reep2 Receptor expression-enhancing protein 2 yes yes 0 0 0 0 5.5 0.5 1 1 103.78 103.78 3 1.2707E-16 37689 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.303 79.81 0 6.3507 1.9949 0.9741 3.9682 6.2828 0 6 2 1 4 6 0 2 1 1 1 1 1962.9 13433 2681 12949 31245;31246 36352;36353 36353 2 LQPHEFQGGTFTISNLGMFGIK Unmodified 2421.2151 0.21510151 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 9 0 1 83.47 83.47 3 1.1076E-11 28870 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.086 57.158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2557.1 13434 2433 12950 31247 36354 36354 1 LQPIALSCVLNIGACK Unmodified 1755.9375 0.93754644 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 8.33 5.22 2 1 2 1 86.953 86.953 2;3;4 1.1417E-11 24454 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.56 95.367 137.02 137.24 134.7 37.837 67.002 49.026 129 140 130 37 65 47 3 3 2 2 2 2 36210 13435 2952 12951 31248;31249;31250;31251;31252;31253 36355;36356;36357;36358;36359;36360;36361 36360 7 LQPPLSQYSVQALRPGSR Unmodified 1996.0854 0.085407969 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 1 10.3 0.471 2 1 62.105 62.105 3;4 3.706E-13 16531 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.26 95.128 267 390.36 331.04 414.05 342.37 540.29 250 376 331 399 356 516 3 3 3 4 3 4 170120 13436 2479 12952 31254;31255;31256 36362;36363;36364;36365;36366 36366 5 LQPQSQPTTR Unmodified 1154.6044 0.60438529 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 6.67 0.471 1 2 34.309 34.309 2;3 5.3796E-07 7191 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.43 95.886 9.657 0 69.483 19.012 43.932 49.036 9 0 65 19 42 46 1 0 2 1 2 1 7709.1 13437 1275 12953 31257;31258;31259 36367;36368;36369 36368 3 LQPSIIFIDEIDSFLR Unmodified 1905.0248 0.024764773 3067 Q9D5T0 Atad1 ATPase family AAA domain-containing protein 1 yes yes 0 0 0 0 8 0 1 110.77 110.77 3 0.00020926 37048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.231 37.582 2.1332 0 2.1532 0 4.184 0 2 0 2 0 4 0 1 0 1 0 1 0 550.33 13438 3067 12954 31260 36370 36370 1 LQQAQLYPIAIFIKPK Unmodified 1870.108 0.10804089 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 1 5.4 5.39 3 2 85.516 85.516 3;4 2.3574E-05 23148 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.632 77.345 114.02 166.92 184.09 61.396 49.904 131.83 108 167 181 61 51 125 5 6 5 3 2 4 26516 13439 538 12955 31261;31262;31263;31264;31265 36371;36372;36373;36374;36375;36376 36376 6 LQQAVMLGALTEVPVPTR Unmodified 1922.0659 0.065918081 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 9.5 0.5 1 1 85.12 85.12 3 3.9267E-07 29662 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.795 46.923 20.218 0 28.468 38.744 0 0 19 0 28 37 0 0 1 0 1 1 0 0 12002 13440 935 12956 31266;31267 36377;36378 36377 2 LQQEAAATGSR Unmodified 1130.568 0.56799978 1144 J3QN31;P28650 Adssl1 Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 0 4.5 0.5 1 1 35.694 35.694 2 0.0047717 9102 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.548 42.625 20.387 0 30.296 9.4965 18.101 68.773 19 0 28 9 19 65 1 0 1 1 1 2 4197.8 13441 1144 12957 31268;31269 36379;36380 36380 2 LQQEDGISFEYHR Unmodified 1620.7532 0.75323437 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 4 0 1 53.768 53.768 3 0.0020434 18083 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.213 39.674 30.044 0 0 0 37.714 28.772 28 0 0 0 37 28 1 0 0 0 1 1 3800.1 13442 1868 12958 31270 36381 36381 1 LQQEETQLEQSIQAGR Unmodified 1856.9228 0.9228189 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 3.5 0.5 1 1 66.345 66.345 3 1.1236E-05 24191 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.346 52.131 29.863 27.661 7.045 19.819 28.076 8.7929 28 28 9 19 28 9 1 1 1 1 1 1 3651.4 13443 2095 12959 31271;31272 36382;36383 36382 2 LQQELDDLLVDLDHQR Unmodified 1948.9854 0.98541915 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 13 0 1 89.823 89.823 3 0.0011661 35669 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.127 32.052 0 0 48.098 37.574 0 0 0 0 46 37 0 0 0 0 1 1 0 0 2749.9 13444 2696 12960 31273 36384 36384 1 LQQELDDLTVDLDHQR Unmodified 1936.949 0.94903365 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3.5 0.5 1 1 76.187 76.187 3 6.0614E-06 28701 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.361 68.84 49.978 67.157 19.167 88.409 120.22 66.657 47 65 19 84 121 65 2 1 1 2 2 1 15214 13445 1974 12961 31274;31275 36385;36386 36385 2 LQQELEAANQSLAELR Unmodified 1811.9377 0.93774068 453 A2AEW8;A2AEW9;Q8VD04;A2AEW6;A2AEW5 Gripap1 GRIP1-associated protein 1 yes no 0 0 0 0 9 4 1 1 79.592 79.592 3 2.2514E-08 30173 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.545 50.107 0 38.257 66.455 35.453 54.621 67.731 0 37 65 37 56 65 0 1 1 1 1 1 2677 13446 453 12962 31276;31277 36387;36388 36387 2 LQQENER Unmodified 915.44101 0.44100836 1495 P31324 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes yes 0 0 0 0 13 0 1 28.013 28.013 2 0.027307 5650 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.162 24.78 69.745 0 0 49.219 56.315 0 65 0 0 46 56 0 1 0 0 1 1 0 5128.1 13447 1495 12963 31278 36389 36389 1 LQQGYNAIGFSQGGQFLR Unmodified 1982.9963 0.99625861 1268 O88531;B1B0P8;B1B0P9 Ppt1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 0 11 2 1 1 71.83 71.83 3 2.009E-07 26847 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.572 81.494 148.82 65.13 0 39.373 56.767 69.29 139 65 0 37 56 65 2 1 0 1 1 1 36058 13448 1268 12964 31279;31280 36390;36391 36391 2 LQQIAAALENK Unmodified 1197.6717 0.67173657 627 B2RXS4 Plxnb2 Plexin-B2 yes yes 0 0 0 0 11 0 1 77.971 77.971 3 0.0061289 23652 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.528 19.15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13449 627 12965 31281 36392 36392 1 LQQLGVVYDVSHYNALLK Unmodified 2059.1102 0.11022574 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 10 1 1 1 80.518 80.518 3 6.8952E-11 27653 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.638 64.623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13450 2235 12966 31282;31283 36393;36394 36393 2 LQQLGVVYDVSHYNALLK Deamidation (N) 2060.0942 0.094241321 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 1 0 0 10 0 1 80.573 80.573 3 8.6155E-08 25327 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.802 51.97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13451 2235 12966 31284 36395 36395 888 1 LQQQFNMHVFK Unmodified 1418.7129 0.71288988 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 10 0 1 62.543 62.543 3 0.025432 17185 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.556 22.459 79.402 0 0 98.871 147.7 74.669 74 0 0 93 148 74 1 0 0 1 1 1 6411.1 13452 728 12967 31285 36396 36396 1 LQQSHPLSASQIQVK Unmodified 1662.9053 0.90531834 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9 1.58 1 1 1 1 50.516 50.516 3 1.9983E-36 14867 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 174.24 139.23 99.382 0 68.446 125.05 107.93 173.88 93 0 65 120 111 166 2 0 1 3 2 3 60939 13453 551 12968 31286;31287;31288;31289 36397;36398;36399;36400;36401 36397 5 LQQTLNALNK Unmodified 1141.6455 0.64552182 2003 Q3UQ44 Iqgap2 Ras GTPase-activating-like protein IQGAP2 yes yes 0 0 0 0 10 0 1 64.631 64.631 3 0.0020656 17999 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.595 31.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13454 2003 12969 31290 36402 36402 1 LQQTQAQVDEVVDIMR Oxidation (M) 1887.936 0.93602612 564 B0QZN5;P63044 Vamp2 Vesicle-associated membrane protein 2 yes no 0 0 1 0 4 0 1 65.185 65.185 3 0.033987 23214 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.732 32.773 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13455 564 12970 31291 36403 36403 27 1 LQQTQAQVDEVVDIMR Unmodified 1871.9411 0.9411115 564 B0QZN5;P63044 Vamp2 Vesicle-associated membrane protein 2 yes no 0 0 0 0 7 3.16 1 1 1 1 1 77.173 77.173 2;3 5.0164E-46 28172 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 177.76 156.46 207.79 158.62 266.84 128.71 229.42 183.22 195 158 260 130 231 176 5 4 5 3 5 3 169770 13456 564 12970 31292;31293;31294;31295;31296 36404;36405;36406;36407;36408;36409;36410 36407 7 LQQTQAQVEEVVDIMR Unmodified 1885.9568 0.95676156 671 Q62442;D3YTU0;A0A0N4SUV3 Vamp1 Vesicle-associated membrane protein 1 yes no 0 0 0 0 5.33 0.471 2 1 81.056 81.056 2;3 3.6719E-05 29927 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.633 68.58 20.207 0 58.764 38.738 0 20.254 19 0 56 37 0 19 1 0 2 1 0 1 10855 13457 671 12971 31297;31298;31299 36411;36412;36413 36413 3 LQQTQNQVDEVVDIMR Unmodified 1914.9469 0.94692516 1763 P63024 Vamp3 Vesicle-associated membrane protein 3 yes yes 0 0 0 0 5 0 1 67.097 67.097 3 0.0074604 23988 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.967 26.812 49.146 20.857 18.01 23.535 28.207 0 46 23 19 23 28 0 1 1 1 1 1 0 8833.6 13458 1763 12972 31300 36414 36414 1 LQQVLEK Unmodified 856.50182 0.5018177 2635 Q8R127;J3QNN5 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 0 8 0 1 59.274 59.274 3 0.033717 18419 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.011 8.9437 0 39.368 0 0 56.251 67.685 0 37 0 0 56 65 0 1 0 0 1 1 5772.5 13459 2635 12973 31301 36415 36415 1 LQQVLQMESHIQSTSDR Unmodified 1998.9793 0.97928792 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 7.5 0.5 1 1 66.38 66.38 3 0.0021024 21582 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.577 35.757 119.66 34.397 57.047 26.499 37.485 49.036 112 37 56 28 37 46 2 1 1 1 1 1 9954.8 13460 1798 12974 31302;31303 36416;36417 36417 2 LQQVTFEVPTCEGK Unmodified 1634.7974 0.79740737 362 Q8BGN8;A0A286YDB6;D3Z5Q8 Synpr Synaptoporin yes no 0 0 0 0 6.33 0.471 2 1 68.486 68.486 2;3;4 8.8522E-07 24047 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.342 56.71 39.193 142.74 150.11 28.398 48.116 128.99 37 139 148 28 46 121 1 3 3 1 1 2 15942 13461 362 12975 31304;31305;31306 36418;36419;36420;36421 36419 4 LQSDSSSSTQVFESVDEVEQTEAEGR Unmodified 2843.2581 0.25808436 619 B2RQR5;Q8BPQ7 Sgsm1 Small G protein signaling modulator 1 yes no 0 0 0 0 2.5 0.5 1 1 71.598 71.598 3 0.0019394 26634 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.595 30.062 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 3069.3 13462 619 12976 31307;31308 36422;36423 36423 2 LQSDVVVPVPQSHQVLIK Unmodified 1985.131 0.13096118 1560 P47199;A0A0A6YXR4;D3YWU6;D3Z4Q4;D3Z2X0;D3YUG9;V9GXY8 Cryz Quinone oxidoreductase yes no 0 0 0 0 7 0 1 66.028 66.028 3 0.013095 22047 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.856 17.017 0 0 29.01 28.875 0 29.848 0 0 28 28 0 28 0 0 1 1 0 1 2705.9 13463 1560 12977 31309 36424 36424 1 LQSEPESIR Unmodified 1057.5404 0.54038805 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 7.33 4.03 1 1 1 42.472 42.472 2 2.1162E-34 12775 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 199.46 110.16 586.25 569.13 633.11 645.55 340.31 397.5 551 582 646 631 353 382 2 3 3 3 2 2 118990 13464 599;600 12978 31310;31311;31312 36425;36426;36427 36425 3 LQSEPESIRK Unmodified 1185.6354 0.63535107 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 1 5.5 0.5 1 1 42.352 42.352 3 0.0019489 11686 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.889 28.797 397 253.98 326.97 288.38 309.86 307.76 373 269 330 287 319 297 2 2 2 2 2 2 55908 13465 599;600 12979 31313;31314 36428;36429 36429 2 LQSEVAELK Unmodified 1015.555 0.55497548 2982 Q9CX00 Ist1 IST1 homolog yes yes 0 0 0 0 6 0 1 59.968 59.968 3 0.00249 20314 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.006 0.11665 59.409 43.648 77.15 0 0 39.442 56 46 74 0 0 37 1 1 1 0 0 1 21813 13466 2982 12980 31315 36430 36430 1 LQSGELSPEAVLFTYLGK Unmodified 1951.0302 0.030244081 1168 O08914 Faah Fatty-acid amide hydrolase 1 yes yes 0 0 0 0 9.5 0.5 1 1 98.106 98.106 3 7.3796E-05 32066 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.512 36.182 35.289 0 20.086 23.601 18.135 9.0765 33 0 19 23 18 9 2 0 1 2 1 1 4803.9 13467 1168 12981 31316;31317 36431;36432 36432 2 LQSGICHLFR Unmodified 1229.6339 0.63391128 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11 0 1 57.216 57.216 3 0.00014365 14505 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.767 55.145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7844.2 13468 2803 12982 31318 36433 36433 1 LQSIGTENTEENR Unmodified 1489.7009 0.70086445 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 7 3.54 1 1 1 1 44.903 44.903 2;3 9.4719E-28 13551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 178.52 110.8 138.77 88.819 76.707 97.292 188.63 76.981 130 93 74 93 185 75 3 3 2 2 3 2 37367 13469 1309 12983 31319;31320;31321;31322 36434;36435;36436;36437 36435 4 LQSIGTENTEENRR Unmodified 1645.802 0.80197548 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 7.17 2.91 1 1 1 1 1 1 38.222 38.222 3 8.6607E-41 10456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 180.49 137.31 467.86 935.77 1130.2 513.71 1037 1037.8 441 924 1120 524 1048 999 6 7 6 5 8 6 526400 13470 1309 12984 31323;31324;31325;31326;31327;31328 36438;36439;36440;36441;36442;36443;36444;36445;36446 36440 9 LQSIGTENTEENRR Deamidation (N) 1646.786 0.78599106 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 1 4 0 1 40.271 40.271 3 0.02968 11670 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.69 23.923 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13471 1309 12984 31329 36447 36447 371 1 LQSLLAK Unmodified 771.48544 0.48543935 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 11.5 0.5 1 1 66.565 66.565 2 0.022314 16480 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.37 12.459 167.85 133.73 170.27 131.94 207.49 389.57 158 139 171 130 205 371 1 1 1 1 1 2 126700 13472 2646 12985 31330;31331 36448;36449 36449 2 LQSPEFQSLFTEGLK Unmodified 1722.8829 0.88285156 2589 Q8K1J6;A0A0N4SUW4;A0A0N4SV41 Trnt1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes no 0 0 0 0 7 0 1 84.884 84.884 3 0.0055316 30945 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.249 20.382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13473 2589 12986 31332 36450 36450 1 LQSPIILLYCTK Unmodified 1447.8109 0.81087259 1089 G3X9V4;Q01097;A0A0G2JEA7 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 11.3 0.471 2 1 84.194 84.194 2;3 7.4637E-05 23391 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.291 52.405 69.451 58.338 123.95 45.836 45.358 68.253 65 56 120 46 46 65 1 1 2 1 2 1 11781 13474 1089 12987 31333;31334;31335 36451;36452;36453 36453 3 LQSQDLGK Unmodified 887.47125 0.47124585 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6.5 0.5 1 1 47.706 47.706 2 0.0087359 14288 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.07 37.029 157.83 76.006 254.25 244.55 197.15 145.7 148 83 250 241 204 139 1 1 2 2 2 1 25330 13475 2186 12988 31336;31337 36454;36455 36454 2 LQSQLLSLEK Unmodified 1157.6656 0.66558856 1082 Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm2 Dynamin-2 yes no 0 0 0 0 9.71 2.25 1 2 1 1 2 68.168 68.168 2;3 5.4734E-07 22455 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.28 0 1447.2 944.96 903.15 915.53 885.8 1380.6 1357 989 902 881 894 1315 8 8 5 6 7 7 422840 13476 1082 12989 31338;31339;31340;31341;31342;31343;31344 36456;36457;36458;36459;36460;36461;36462;36463;36464 36459 9 LQSSDLGVK Unmodified 945.51311 0.51311067 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 8.67 3.09 1 1 1 53.433 53.433 2 0.0014745 16193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.66 21.202 265.31 176.2 164.4 231.51 70.988 265.54 249 185 166 222 74 251 3 3 2 3 1 3 19197 13477 3056 12990 31345;31346;31347 36465;36466;36467 36466 3 LQSSNIFTVAK Unmodified 1206.6608 0.66083754 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 10.5 0.5 1 1 67.061 67.061 3 0.00057113 18598 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.819 46.346 58.355 123.73 64.748 174.9 200.71 134.97 55 121 65 167 204 130 1 2 1 3 3 2 51104 13478 1203 12991 31348;31349 36468;36469;36470 36470 3 LQSVLGK Unmodified 743.45414 0.45413923 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 12 1 1 1 59.942 59.942 2 0.011759 15650 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.29 23.381 168.1 134.44 126.81 110.85 154.91 153.35 158 139 130 111 158 148 1 1 1 1 1 1 68380 13479 2844 12992 31350;31351 36471;36472 36471 2 LQSWLYASR Unmodified 1122.5822 0.58219329 2859 Q99LC3;A0A087WR38 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 0 11 0.816 1 1 1 67.214 67.214 2;3 0.0020471 16733 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.849 42.978 87.545 257.26 294.83 99.621 254.06 143.57 83 250 292 102 251 139 1 3 2 1 2 2 129210 13480 2859 12993 31352;31353;31354 36473;36474;36475;36476 36476 4 LQTAPVPMPDLK Unmodified 1308.7112 0.71115855 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 9 0 1 70.437 70.437 2 7.4054E-08 22913 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.51 67.345 0 49.743 15.833 39.079 22.263 0 0 47 19 37 23 0 0 1 1 1 1 0 4339.3 13481 572;46 12994 31355 36477 36477 1 LQTASDESYKDPTNIQLSK Unmodified 2137.0539 0.053892649 551 A3KGU7;A3KGU9;A3KGU5;E9Q447 Sptan1 yes no 0 0 0 1 8.2 2.48 1 2 1 1 60.462 60.462 3;4 8.1959E-10 19537 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.45 86.898 536.98 505.54 790.86 523.13 664.46 541.85 507 521 783 528 676 519 4 4 5 4 5 3 112850 13482 551 12995 31356;31357;31358;31359;31360 36478;36479;36480;36481;36482 36480 5 LQTCCDKPLLK Unmodified 1374.6999 0.69994194 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 9.8 1.72 1 2 1 1 54.201 54.201 3;4 0.00062541 18079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.548 57.54 337.33 279.22 647.2 217.7 662.98 298.88 316 265 620 222 649 287 2 1 3 2 3 2 81275 13483 1321 12996 31361;31362;31363;31364;31365 36483;36484;36485;36486;36487 36487 5 LQTELEQEYQDK Unmodified 1522.7151 0.71511753 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 13 0 1 62.247 62.247 3 0.032001 22291 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.025 17.827 87.894 70.536 135.98 0 0 78.884 83 74 130 0 0 74 1 1 1 0 0 1 6460.7 13484 3373 12997 31366 36488 36488 1 LQTGFTENEVLQIFCDTCEAVAR Unmodified 2700.2524 0.25235124 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 8.25 2.77 1 2 1 97.462 97.462 3;4 6.3205E-12 35826 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.805 59.484 0 18.818 40.177 8.6347 0 39.442 0 18 38 9 0 37 0 2 2 1 0 2 10387 13485 1983 12998 31367;31368;31369;31370 36489;36490;36491;36492 36490 4 LQTLATNLLASEASDK Unmodified 1673.8836 0.88357984 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 9 0 1 81.016 81.016 3 1.7122E-05 27833 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.573 72.707 48.999 0 60.345 0 0 0 46 0 56 0 0 0 1 0 1 0 0 0 10436 13486 2790 12999 31371 36493 36493 1 LQTLKEELDFQK Unmodified 1490.7981 0.7980593 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 1 9 0 1 73.26 73.26 3 0.013597 24220 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.546 31.44 119.1 0 0 149.23 143.33 134.49 111 0 0 139 148 130 1 0 0 1 1 1 8396.1 13487 1580 13000 31372 36494 36494 1 LQTTATSR Unmodified 876.46649 0.46649483 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 2.94 1 1 1 31.933 31.933 2 0.0083049 6951 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.19 54.406 82.869 89.108 127.32 0 116.11 0 78 91 123 0 111 0 2 3 3 0 2 0 11866 13488 1412 13001 31373;31374;31375 36495;36496;36497 36495 3 LQTYVTLLALPSTEPDGLLR Unmodified 2199.2151 0.21508474 1915 Q3TDD9 Ppp1r21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 0 10 0 1 96.115 96.115 3 2.5361E-06 31463 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.747 50.113 0 0 0 0 37.384 38.375 0 0 0 0 37 37 0 0 0 0 1 1 2811.8 13489 1915 13002 31376 36498 36498 1 LQVAGEITTGPR Unmodified 1240.6776 0.67755023 2396;3270 Q8BH59;Q9QXX4 Slc25a12;Slc25a13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 no no 0 0 0 0 8.5 2.69 1 1 1 1 55.064 55.064 2 6.5111E-08 18546 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.94 69.63 217.93 0 161.17 290.57 195.45 164.14 204 0 157 278 205 157 2 0 2 4 4 2 29908 13490 2396;3270 13003 31377;31378;31379;31380 36499;36500;36501;36502 36502 4 LQVASDENYKDPTNLQGK Unmodified 2018.9909 0.99089846 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6.8 1.17 1 1 1 2 57.616 57.616 3;4 1.344E-09 18114 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.88 88.517 234.41 292.79 237.64 432.9 529.21 367.08 222 287 240 417 537 352 3 3 2 3 4 3 49684 13491 551 13004 31381;31382;31383;31384;31385 36503;36504;36505;36506;36507 36505 5 LQVASVAK Unmodified 814.49125 0.49125301 2514 Q8CAB8 Gatsl2 GATS-like protein 2 yes yes 0 0 0 0 9 0 1 52.435 52.435 2 0.030502 14270 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.371 17.764 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13492 2514 13005 31386 36508 36508 1 LQVCNLCGFNPTPHLVEK Unmodified 2125.0449 0.044865063 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 9 0 1 69.404 69.404 3 0.011379 22373 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.453 23.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13493 1275 13006 31387 36509 36509 1 LQVELDSVTGLLSQSDSK Unmodified 1917.9895 0.98950148 2696 Q8VDD5;A0A2R8W6V7 Myh9 Myosin-9 yes no 0 0 0 0 13 0 1 87.394 87.394 3 0.0015184 34436 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.371 29.314 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13494 2696 13007 31388 36510 36510 1 LQVINLAAK Unmodified 968.60187 0.6018661 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 68.17 68.17 2 2.4569E-05 19745 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.63 115.02 176.57 241.93 154.74 461.19 326.05 73.554 166 241 157 436 323 69 2 3 2 4 2 1 51552 13495 3249 13008 31389;31390;31391;31392 36511;36512;36513;36514 36511 4 LQVPSVFKPTR Unmodified 1270.7398 0.73975656 602 B1AWV9;Q5DTL9 Slc4a10 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger yes no 0 0 0 1 8 4.97 1 1 1 61.814 61.814 3 0.0016512 20783 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.043 50.379 178.75 88.927 59.4 105.62 137.64 242.32 167 87 56 99 139 231 2 2 1 1 1 2 58251 13496 602 13009 31393;31394;31395 36515;36516;36517 36515 3 LQVSQQEDITK Unmodified 1287.667 0.66704513 2819 Q924B0;O55023;Q80ZJ2 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 7.5 3.2 1 2 1 52.755 52.755 2;3 0.00037104 17456 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.617 38.36 247 190.09 203.48 377.01 405.35 302.1 232 195 208 363 414 293 3 2 2 4 4 3 39638 13497 2819 13010 31396;31397;31398;31399 36518;36519;36520;36521 36521 4 LQVVDRPLPVR Unmodified 1290.7772 0.7772047 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 1 8 0 1 52.432 52.432 3 0.00010175 15012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.957 63.314 108.08 89.086 154.25 0 141.14 123.89 102 93 148 0 139 120 1 1 1 0 1 1 12994 13498 1412 13011 31400 36522 36522 1 LQYAGWGPK Unmodified 1018.5236 0.52361577 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 10.8 1.48 1 1 1 1 62.344 62.344 2;3 0.00059592 17075 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.62 64.06 328.88 107.47 188.67 112.03 75.339 88.478 315 111 186 111 74 83 4 2 3 2 1 1 46202 13499 2322 13012 31401;31402;31403;31404 36523;36524;36525;36526 36524 4 LQYLSSK Unmodified 837.45962 0.45961853 449 A2AE27;Q9DBT5 Ampd2 AMP deaminase 2 yes no 0 0 0 0 10 0 1 56.632 56.632 2 0.034793 14632 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.452 23.535 68.827 82.258 84.524 0 122.24 95.65 65 83 83 0 120 93 1 1 1 0 1 1 11214 13500 449 13013 31405 36527 36527 1 LQYYVPENFWK Unmodified 1485.7293 0.72925145 605 E9PV45;B1AY13 Usp24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 0 10 0 1 82.805 82.805 3 0.052578 26293 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.426 15.794 49.358 0 0 0 29.288 0 46 0 0 0 28 0 1 0 0 0 1 0 3950.9 13501 605 13014 31406 36528 36528 1 LRDDTEAAIR Unmodified 1158.5993 0.59929991 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 7.33 4.03 1 1 1 39.038 39.038 2;3 2.5431E-07 11239 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 150.61 46.171 147.83 179.96 222.32 163.89 311.77 22.728 139 182 222 167 306 22 1 3 2 2 3 1 65569 13502 154 13015 31407;31408;31409 36529;36530;36531 36529 3 LRDPLQVHLPLR Unmodified 1455.8674 0.86741669 1997 Q3UMR5 Mcu Calcium uniporter protein, mitochondrial yes yes 0 0 0 1 9 0 1 58.468 58.468 4 0.0079267 17103 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.013 33.204 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 6654.6 13503 1997 13016 31410 36532 36532 1 LREDEGTWVQVSLLHFVPTR Unmodified 2381.2492 0.24917883 19 A0A087WPR1;P20917 Mag Myelin-associated glycoprotein yes no 0 0 0 1 9 0 1 77.65 77.65 4 3.1013E-05 26256 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.059 36.038 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 3833.6 13504 19 13017 31411 36533 36533 1 LREDENAEPVGTTYQK Unmodified 1848.8854 0.88537076 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 1 4 0.816 1 1 1 46.731 46.731 3 4.1807E-11 14350 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.64 92.776 108.85 0 188.36 34.304 46.54 127.92 102 0 176 37 46 120 1 0 2 1 1 1 34263 13505 3267 13018 31412;31413;31414 36534;36535;36536 36536 3 LREDENAEPVGTTYQK Deamidation (N) 1849.8694 0.86938634 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 1 0 1 4 0 1 47.995 47.995 3 7.7811E-07 15336 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.66 81.625 0 9.4375 8.2837 19.936 17.951 29.336 0 9 9 19 19 28 0 1 1 1 1 1 2674.9 13506 3267 13018 31415 36537 36537 1120 1 LREEMER Unmodified 961.46511 0.46511462 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 3 0 2 33.802 33.802 3 0.014766 9032 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.46 44.505 187.16 114.42 186.6 177.88 178.74 192.11 176 120 187 176 185 185 2 1 2 2 2 2 25608 13507 118;1534 13019 31416;31417 36538;36539 36538 2 LRLDQLTANSAR Unmodified 1356.7474 0.74736113 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 9 0 1 52.708 52.708 3 0.042455 14412 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.28 27.472 88.337 81.482 52.232 67.932 0 118.33 83 83 56 65 0 111 1 1 1 1 0 1 5577.6 13508 1304 13020 31418 36540 36540 1 LRPEMLQDLR Unmodified 1269.6863 0.68634078 1832 P84075;E9PV73;A2A7R5;A2A7R6 Hpca Neuron-specific calcium-binding protein hippocalcin yes no 0 0 0 1 8.67 3.09 1 1 1 57.245 57.245 3 0.00036056 19548 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.618 46.146 323.93 310.67 476.81 87.07 321.42 453.47 306 320 463 93 326 434 3 3 3 2 3 3 101530 13509 1832 13021 31419;31420;31421 36541;36542;36543 36543 3 LRPEVLQDLR Unmodified 1237.7143 0.71427009 1734 P62748;A0A1Y7VMK3 Hpcal1 Hippocalcin-like protein 1 yes no 0 0 0 1 13 0 1 55.277 55.277 3 0.0014591 18893 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.243 53.402 177.86 124.36 117.75 83.701 0 118.33 167 130 120 83 0 111 1 1 1 1 0 1 13399 13510 1734 13022 31422 36544 36544 1 LRPIAVIK Unmodified 908.61712 0.61712223 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 1 11.5 0.5 1 1 53.788 53.788 3 0.0082941 11688 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.251 62.4 271.79 333.8 194.1 179.86 474.2 205.74 254 334 197 179 468 199 1 2 1 1 2 1 73959 13511 2862 13023 31423;31424 36545;36546 36546 2 LRPLSYPQTDVFLVCFSVVSPSSFENVK Unmodified 3214.6373 0.63727191 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 1 11.5 1.5 1 1 91.907 91.907 4 0.038382 29973 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 28.59 11.373 0 18.495 39.322 48.671 18.936 0 0 18 38 47 19 0 0 2 1 2 1 0 3236.8 13512 1676 13024 31425;31426 36547;36548 36547 2 LRPLYNHPAGPR Unmodified 1389.763 0.76295162 3015 Q9D023 Mpc2 Mitochondrial pyruvate carrier 2 yes yes 0 0 0 1 10.5 0.5 1 1 36.373 36.373 4 8.5614E-05 6435 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.568 65.937 49.176 36.052 111 60.754 24.141 68.601 46 37 111 56 28 65 1 1 1 1 1 1 19102 13513 3015 13025 31427;31428 36549;36550 36549 2 LRPQTYDLQESNVHLK Unmodified 1940.0116 0.011574324 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46;E0CYM4 Sept8 Septin-8 yes no 0 0 0 1 6 0 1 52.676 52.676 4 5.8466E-05 16609 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.38 72.802 109.04 80.96 0 68.547 132.83 0 102 83 0 65 130 0 1 1 0 1 1 0 7453.7 13514 575 13026 31429 36551 36551 1 LRPVNQNK Unmodified 967.55631 0.55631289 92 A0A0G2JEP0;Q61584;A0A0H2UH27 Fxr1 Fragile X mental retardation syndrome-related protein 1 yes no 0 0 0 1 10 0 1 33.912 33.912 3 0.027484 5544 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.88 35.625 44.649 41.088 35.247 47.065 59.118 43.085 42 42 37 46 60 42 1 1 1 1 1 1 2540.9 13515 92 13027 31430 36552 36552 1 LRVDPVNFK Unmodified 1086.6186 0.61857879 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha no no 0 0 0 1 11.5 1.5 1 1 57.043 57.043 3 0.012514 14831 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.82 30.012 636.33 696.25 846.43 780.66 906.81 785.35 601 708 856 776 927 761 2 2 2 2 2 2 91110 + 13516 2735 13028 31431;31432 36553;36554 36553 2 LSAASGGTLDR Unmodified 1046.5356 0.53563702 1287 Q8R357;O88998 Olfm1 Noelin yes no 0 0 0 0 7 0 1 43.289 43.289 2 0.0002519 11410 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.647 51.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13517 1287 13029 31433 36555 36555 1 LSAEDLVLEGAGLR Unmodified 1441.7777 0.77765821 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 5.5 0.5 1 1 79.154 79.154 3 0.0042266 29730 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.298 27.1 0 20.216 0 0 19.197 19.706 0 19 0 0 19 19 0 1 0 0 1 1 1741.5 13518 1035 13030 31434;31435 36556;36557 36556 2 LSAGELASLSASQVPTALTFEEPVAK Unmodified 2615.3694 0.36941313 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 8.67 3.09 1 1 1 88.276 88.276 3;4 2.3189E-20 33229 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.826 68.897 39.044 29.329 27.7 69.062 17.674 98.634 37 28 28 65 19 93 2 1 1 2 1 2 10861 13519 860 13031 31436;31437;31438 36558;36559;36560 36558 3 LSAGVFRPLLDEPIPLYEAK Unmodified 2227.2253 0.22525549 781 D3Z6I4;Q921W4 Cryzl1 Quinone oxidoreductase-like protein 1 yes no 0 0 0 1 9 0 1 86.004 86.004 3 0.013941 30070 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.999 27.66 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13520 781 13032 31439 36561 36561 1 LSAIYGGTYMLNKPVDDIIMENGK Deamidation (N) 2642.2972 0.29717616 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 1 0 1 13 0 1 84.747 84.747 4 3.0098E-12 33139 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.681 64.432 39.168 0 89.609 0 0 39.442 37 0 83 0 0 37 1 0 1 0 0 1 4376.9 13521 1595 13033 31440 36562 36562 608 1 LSALALLSLLPSDNSVIQDK Unmodified 2096.1729 0.17288557 2601 Q8K2V6 Ipo11 Importin-11 yes yes 0 0 0 0 12 0 1 103.74 103.74 3 6.7286E-07 29047 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.679 47.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13522 2601 13034 31441 36563 36563 1 LSASEALGSAALPSHSSAISQHSK Unmodified 2335.1768 0.17680175 2947 Q9CQX8 Mrps36 28S ribosomal protein S36, mitochondrial yes yes 0 0 0 0 7 0 1 52.713 52.713 4 1.205E-06 15848 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.359 38.197 0 0 29.041 28.17 37.408 0 0 0 28 28 37 0 0 0 1 1 1 0 3469 13523 2947 13035 31442 36564 36564 1 LSASSLTMESFAFLWAGGR Unmodified 2029.9931 0.99314707 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 12 0.816 1 1 1 100.5 100.5 3 1.0632E-07 28504 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.495 76.811 0 0 13.985 9.5399 0 0 0 0 14 9 0 0 0 0 2 1 0 0 4461.1 13524 2714 13036 31443;31444;31445 36565;36566;36567;36568 36566 4 LSCDGSR Unmodified 793.33885 0.33885147 3340 Q9WV18 Gabbr1 Gamma-aminobutyric acid type B receptor subunit 1 yes yes 0 0 0 0 5 0 1 29.424 29.424 2 0.036462 6181 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.119 25.108 30.044 0 0 29.749 45.439 38.145 28 0 0 28 46 37 1 0 0 1 1 1 3057.3 13525 3340 13037 31446 36569 36569 1 LSCFAQSVSPAEK Unmodified 1422.6813 0.68131498 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 8.33 0.471 2 1 62.631 62.631 2;3 1.6967E-05 19126 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.26 63.54 138.05 96.551 218.92 137.76 155.33 242.88 130 102 214 139 158 232 1 1 3 2 1 3 26579 13526 2131 13038 31447;31448;31449 36570;36571;36572 36572 3 LSCVPVLIFANK Unmodified 1359.7584 0.75844309 3334 Q9WUL7 Arl3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 0 5.2 5.15 3 1 1 86.633 86.633 3 8.7724E-10 30289 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.522 54.265 0 48.944 19.246 189.35 18.936 29.848 0 46 19 177 19 28 0 1 1 5 1 1 50735 13527 3334 13039 31450;31451;31452;31453;31454 36573;36574;36575;36576;36577;36578 36575 6 LSDDNTIGQEEIQQR Deamidation (N) 1745.8068 0.80678609 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 1.5 0.5 1 1 53.651 53.651 3 4.212E-05 17868 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.39 66.995 59.47 17.895 88.638 19.667 27.961 38.644 56 19 84 19 28 37 2 1 2 1 1 1 13914 13528 551 13040 31455;31456 36579;36580 36580 153 2 LSDDNTIGQEEIQQR Unmodified 1744.8228 0.8227705 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.57 4.75 3 1 1 2 51.588 51.588 2;3 8.8725E-78 16907 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.55 146.23 255.96 223.43 325.19 288.4 333.36 222.69 241 231 326 287 337 213 2 3 4 4 4 4 150850 13529 551 13040 31457;31458;31459;31460;31461;31462;31463 36581;36582;36583;36584;36585;36586;36587;36588 36588 8 LSDEHEPEQR Unmodified 1238.5527 0.55274365 2813 Q923B1 Dbr1 Lariat debranching enzyme yes yes 0 0 0 0 1 0 1 29.528 29.528 3 0.0023923 6533 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.32 45.456 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 4402.7 13530 2813 13041 31464 36589 36589 1 LSDEILIDILTR Unmodified 1399.7922 0.79224564 1055 G3UVV4;P17710;D3YYR4;D3Z365;B4YB29 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 8.67 3.09 1 1 1 97.598 97.598 2;3 1.8155E-11 35960 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.77 81.702 120.31 65.856 102.78 78.613 83.212 73.315 113 65 100 78 84 70 5 2 3 4 3 3 45068 13531 1055 13042 31465;31466;31467 36590;36591;36592;36593;36594 36593 5 LSDFAAALDPPLLIAKPNK Unmodified 1993.1248 0.12481317 111 A0A0J9YTW6;B1AWN6;A2ASI5 Scn2a1;Scn3a Sodium channel protein no no 0 0 0 1 11 2 1 1 87.543 87.543 4 1.0542E-07 30916 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.418 69.402 0 48.944 49.772 0 65.345 116.46 0 46 46 0 65 111 0 1 1 0 1 2 6918.8 13532 111 13043 31468;31469 36595;36596 36595 2 LSDFLITGGGK Unmodified 1106.5972 0.59717465 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 0 9 0 1 75.446 75.446 2 0.00078334 25182 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.549 35.291 0 59.584 0 71.045 0 88.478 0 56 0 65 0 83 0 1 0 1 0 1 3246.2 13533 2033 13044 31470 36597 36597 1 LSDGFNGADLR Deamidation (N) 1164.5411 0.54111633 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 1 0 0 4 0 1 60.433 60.433 2 0.064276 21159 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.536 34.579 39.701 0 0 40.441 0 0 37 0 0 37 0 0 1 0 0 1 0 0 5144.7 13534 1726 13045 31471 36598 36598 1 LSDGNEYLFQAK Deamidation (N) 1384.6511 0.65106071 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 1 0 0 5 0 1 69.989 69.989 3 0.022176 25362 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.627 23.508 29.753 0 48.827 17.857 0 24.518 28 0 46 19 0 23 1 0 1 1 0 1 2468.9 13535 2148 13046 31472 36599 36599 841 1 LSDGNEYLFQAK Unmodified 1383.667 0.66704513 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 67.352 67.352 2;3 5.0057E-05 24563 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.64 45.072 166.47 229.92 277.77 188.42 236.48 202.53 157 231 278 186 241 194 2 3 3 2 3 2 68808 13536 2148 13046 31473;31474;31475 36600;36601;36602 36602 3 LSDGVAVLK Unmodified 900.52803 0.52803245 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 62.29 62.29 2;3 0.00096507 19704 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.21 42.532 763.02 627.37 891.62 500.48 323.12 907.54 719 652 883 508 329 860 3 3 3 2 1 3 94057 13537 1766 13047 31476;31477;31478 36603;36604;36605 36604 3 LSDHPDVR Unmodified 937.46174 0.4617438 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 4 1 1 1 33.22 33.22 3 0.006823 8937 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.825 37.354 0 0 48.111 37.281 75.691 0 0 0 46 37 74 0 0 0 2 1 2 0 5112 13538 2633 13048 31479;31480 36606;36607 36606 2 LSDIGEGIR Unmodified 958.50836 0.50835964 1614 P53395 Dbt Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 0 5 0 1 55.638 55.638 2 0.0090415 18647 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.605 20.514 48.853 44.867 46.834 0 77.404 0 46 46 46 0 74 0 1 1 1 0 1 0 3898.9 13539 1614 13049 31481 36608 36608 1 LSDIPEGK Unmodified 857.44945 0.44944778 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 53.33 53.33 2;3 0.010617 17624 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.962 14.36 335.64 115.47 461.34 501.78 392.97 403.46 315 120 455 491 408 389 3 1 4 4 3 3 76658 13540 2958 13050 31482;31483;31484;31485 36609;36610;36611;36612 36612 4 LSDLLAPISEQIQEVITFR Unmodified 2171.1838 0.18378461 1536 P40124;B1ARS0 Cap1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein yes no 0 0 0 0 10.6 1.36 1 2 1 1 113.96 113.96 3;4 7.774E-21 34556 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.93 114.11 11.423 1.8961 6.3621 3.279 22.697 14.515 11 2 6 3 22 14 3 1 2 1 2 2 40103 13541 1536 13051 31486;31487;31488;31489;31490 36613;36614;36615;36616;36617;36618;36619;36620;36621 36616 9 LSDLQSVNVGLFDQYFR Unmodified 2000.0003 0.0003409361 2305 Q80TM9;F7AFP3;F6YR29 Nisch Nischarin yes no 0 0 0 0 9 0 1 92.866 92.866 3 0.035501 33055 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.387 22.288 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 875.98 13542 2305 13052 31491 36622 36622 1 LSDPANWLK Unmodified 1042.5447 0.54474515 727 D3YYT0;P15116 Cdh2 Cadherin-2 yes no 0 0 0 0 9 0 1 73.025 73.025 2 0.0097743 24044 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.682 20.299 0 0 86.872 65.867 0 78.884 0 0 83 65 0 74 0 0 1 1 0 1 7621.1 13543 727 13053 31492 36623 36623 1 LSDQFHDILIR Unmodified 1355.7197 0.7197494 1361 P12815 Pdcd6 Programmed cell death protein 6 yes yes 0 0 0 0 7.5 0.5 1 1 65.244 65.244 3 0.00054365 21650 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.124 47.317 59.537 27.776 69.04 55.159 102.86 37.846 56 28 65 56 102 37 2 1 1 2 2 1 14454 13544 1361 13054 31493;31494 36624;36625 36624 2 LSDSYSNTLPVR Unmodified 1350.6779 0.67794416 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8.67 3.09 1 1 1 56.696 56.696 2 3.1001E-13 17681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129 90.645 39.272 30.629 46.103 36.657 55.079 52.794 37 32 46 37 56 51 1 1 1 1 1 1 8965.8 13545 607 13055 31495;31496;31497 36626;36627;36628 36627 3 LSDVTLVPVSCSELEK Unmodified 1774.9023 0.90226638 2861 Q99LD8 Ddah2 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 yes yes 0 0 0 0 6 0 1 76.677 76.677 3 9.0301E-06 27888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.574 46.246 29.865 0 30.145 0 67.031 27.935 28 0 28 0 65 28 1 0 1 0 1 1 2384.7 13546 2861 13056 31498 36629 36629 1 LSDYFPKPYPNPEAAR Unmodified 1863.9155 0.91554867 3030 Q9D0M3;A0A2R8VHK1 Cyc1 Cytochrome c1, heme protein, mitochondrial yes no 0 0 0 1 9.75 1.92 1 2 1 65.585 65.585 3;4 3.933E-05 23725 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.464 49.274 439.13 401.57 238.96 459.17 493.92 473.07 412 409 239 440 503 457 3 4 1 3 3 3 82893 13547 3030 13057 31499;31500;31501;31502 36630;36631;36632;36633 36633 4 LSECLQEVYEPEWPGR Unmodified 1990.9095 0.90947702 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 4 0 1 76.662 76.662 3 0.0015756 28454 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.993 40.829 0 9.576 0 0 19.874 0 0 9 0 0 19 0 0 1 0 0 1 0 1597.6 13548 1157;2210 13058 31503 36634 36634 1 LSEDVEQVK Unmodified 1045.5292 0.52915466 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 3.5 0.5 1 1 53.81 53.81 3 0.00067111 18403 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.629 21.248 108.55 90.394 114.13 0 184.1 0 102 93 111 0 176 0 1 1 2 0 2 0 28640 13549 1696 13059 31504;31505 36635;36636 36635 2 LSEDVEQVKK Unmodified 1173.6241 0.62411768 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 1 5.5 0.5 1 1 51.295 51.295 3 0.00024296 15912 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.229 53.894 947.01 669.49 1130.4 989.41 1286.6 1052.7 892 707 1127 989 1308 1022 2 2 2 2 2 2 81684 13550 1696 13060 31506;31507 36637;36638 36638 2 LSEEDAGVFISR Unmodified 1321.6514 0.65139506 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 4 0 1 63.309 63.309 2 0.006661 22461 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.426 22.405 20.207 0 30.194 0 0 0 19 0 28 0 0 0 1 0 1 0 0 0 2418.7 13551 1039 13061 31508 36639 36639 1 LSEEEILENQDLFLTSEATDYGR Unmodified 2671.2501 0.25008585 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 0 3.5 0.5 1 1 86.146 86.146 3 2.2377E-39 31393 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.13 96.824 0 18.576 0 9.837 0 0 0 18 0 9 0 0 0 2 0 1 0 0 4052.6 13552 2442 13062 31509;31510 36640;36641;36642;36643;36644 36640 5 LSEEELK Unmodified 846.43346 0.43346336 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 0 4.5 0.5 1 1 51.752 51.752 2 0.016482 16857 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.82 14.851 346.99 175.89 142.9 317.11 469.63 216.01 325 176 139 306 470 208 2 1 1 2 2 1 35882 13553 3232 13063 31511;31512 36645;36646 36646 2 LSEEELKQLENVLDDLDPESATLPAGFR Unmodified 3127.5561 0.55610428 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 1 9.5 3.5 1 1 102.36 102.36 4 0.00015478 37550 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.973 26.441 7.4782 31.346 4.1971 0 0 13.858 7 30 4 0 0 13 1 2 1 0 0 2 3086.8 13554 3232 13064 31513;31514 36647;36648 36647 2 LSEFIPAVFLLK Unmodified 1375.8115 0.81152452 2492 Q8C2E7 Kiaa0196 WASH complex subunit strumpellin yes yes 0 0 0 0 12 0 1 103.03 103.03 2 2.3225E-13 28947 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.78 72.216 0 0 12.984 0 0 6.396 0 0 12 0 0 6 0 0 1 0 0 1 480.52 13555 2492 13065 31515 36649 36649 1 LSEIVTLAK Unmodified 972.58555 0.58554733 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9.8 1.72 1 2 1 1 73.141 73.141 2;3 4.5968E-08 27344 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.15 83.245 599.85 229.72 639.18 503.34 443.73 450.54 563 234 627 503 455 432 4 3 5 5 4 3 145180 13556 3397 13066 31516;31517;31518;31519;31520 36650;36651;36652;36653;36654 36654 5 LSELDDR Unmodified 846.40831 0.40831125 564;1763;671 P63024;B0QZN5;P63044;Q62442;D3YTU0;A0A0N4SUV3 Vamp3;Vamp2;Vamp1 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2;Vesicle-associated membrane protein 1 no no 0 0 0 0 3.5 1.12 1 1 1 1 47.122 47.122 2 0.0058298 15213 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 138.55 30.876 405.6 553.89 683.15 471.22 789.08 195.72 381 547 680 454 773 185 4 3 4 4 4 2 491210 13557 1763;564;671 13067 31521;31522;31523;31524 36655;36656;36657;36658;36659 36656 5 LSELDDRADALQAGASQFESSAAK Unmodified 2479.1827 0.18267499 671 Q62442;D3YTU0;A0A0N4SUV3 Vamp1 Vesicle-associated membrane protein 1 yes no 0 0 0 1 5 0 1 69.514 69.514 4 2.6975E-15 25159 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.593 60.994 118.1 68.925 110.51 133.46 108.65 38.45 111 74 112 130 111 37 2 2 2 2 2 1 3901.8 13558 671 13068 31525 36660;36661 36661 2 LSELDDRADALQAGASQFETSAAK Unmodified 2493.1983 0.19832505 564;1763 P63024;B0QZN5;P63044 Vamp3;Vamp2 Vesicle-associated membrane protein 3;Vesicle-associated membrane protein 2 no no 0 0 0 1 6.83 2.91 1 1 2 1 1 69.422 69.422 3;4;5 1.2409E-35 25141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.42 118.41 396.14 355.83 93.658 296.58 469.33 383.97 371 361 93 278 472 370 5 6 2 5 6 5 112460 13559 1763;564 13069 31526;31527;31528;31529;31530;31531 36662;36663;36664;36665;36666;36667;36668 36664 7 LSELNQK Unmodified 830.44978 0.44978213 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 49.641 49.641 2;3 0.0058039 14364 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.33 67.192 696.14 508.05 577.82 434.46 651.51 487.63 654 522 569 424 652 466 4 4 3 3 4 3 100120 13560 551 13070 31532;31533;31534;31535;31536 36669;36670;36671;36672;36673 36670 5 LSEMTEAEQQQLIDDHFLFDKPVSPLLTAAGMAR Unmodified 3800.8753 0.8753467 1490 P30275;A2ARP5 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 1 10 3 1 1 88.51 88.51 4 1.7742E-06 34879 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.241 42.384 20.294 28.277 8.7534 29.716 19.463 0 19 28 9 28 19 0 1 2 1 2 1 0 10317 13561 1490 13071 31537;31538 36674;36675 36675 2 LSENVIDR Unmodified 944.49271 0.49270958 742 D3Z0L4;Q9D9P1;Q9CRB9;S4R238 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 5 0 1 48.128 48.128 2 0.0057112 15022 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.11 40.069 0 67.931 73.529 55.303 80.952 96.828 0 65 74 56 83 93 0 1 1 1 1 1 9595.7 13562 742 13072 31539 36676 36676 1 LSEQELEFR Unmodified 1149.5666 0.5666028 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4 0.816 1 1 1 59.572 59.572 2 2.1749E-05 20845 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.88 99.535 235.62 180.32 281.62 145.15 230.73 236.77 222 186 274 148 231 227 3 2 2 2 2 2 49035 13563 2517 13073 31540;31541;31542 36677;36678;36679 36678 3 LSESVVNR Unmodified 902.48214 0.48214489 909 E9Q4M4;Q91VN4 Chchd6 MICOS complex subunit Mic25 yes no 0 0 0 0 5 0 1 42.605 42.605 2 0.013464 12361 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.181 60.385 88.789 53.597 0 59.485 91.597 85.864 83 56 0 56 93 83 1 1 0 1 1 1 6097.5 13564 909 13074 31543 36680 36680 1 LSEVVGSGK Unmodified 874.476 0.47599688 1614 P53395;A0A0G2JGU0 Dbt Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes no 0 0 0 0 7 0 1 53.339 53.339 2 0.0086631 16069 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.915 13.536 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13565 1614 13075 31544 36681 36681 1 LSFDKDAMVAR Unmodified 1251.6282 0.6281572 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 1 8.5 0.5 1 1 58.445 58.445 3 0.0084647 17144 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.829 20.808 87.894 70.536 135.98 0 125.52 0 83 74 130 0 120 0 1 1 1 0 1 0 6994.8 13566 246 13076 31545;31546 36682;36683 36683 2 LSFFFDFK Unmodified 1049.5222 0.52221879 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 11 0 1 94.053 94.053 2 0.038721 30415 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.224 27.194 0 0 0 40.441 0 59.696 0 0 0 37 0 56 0 0 0 1 0 1 3542.2 13567 1412 13077 31547 36684 36684 1 LSFFGLEK Unmodified 939.50657 0.50656873 2221 Q6P5F6;A0A087WRC8;A0A087WQF7 Slc39a10 Zinc transporter ZIP10 yes no 0 0 0 0 11 0 1 79.543 79.543 2 0.016552 24408 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.594 30.716 186 0 0 0 0 0 186 0 0 0 0 0 1 0 0 0 0 0 15103 13568 2221 13078 31548 36685 36685 1 LSFGDTQTIWAR Unmodified 1393.699 0.69901396 614;786 D3Z7D3;F8WI56;Q8BWT5;B2RQ71;E9PWR4;B7ZMZ7;A0A1Y7VMZ0 Dip2a;Dip2c Disco-interacting protein 2 homolog A no no 0 0 0 0 9 0 1 73.205 73.205 2 0.053209 24159 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.361 19.193 33.993 31.236 31.103 33.122 0 0 32 32 32 32 0 0 1 1 1 1 0 0 3914.4 13569 786;614 13079 31549 36686 36686 1 LSFSGLR Unmodified 778.43374 0.43373813 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 58.669 58.669 2 0.026934 15417 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.123 43.241 127.66 77.705 119.56 111.63 136.34 114.44 120 83 120 111 139 111 1 1 1 1 1 1 16358 13570 3266 13080 31550 36687 36687 1 LSFTSVGSITSGYSQSSQVFGR Unmodified 2294.1179 0.11788989 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 9.2 4.17 2 1 5 1 1 77.756 77.756 3;4 1.5524E-130 27374 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 220.34 203.42 167.26 212.38 161.16 196.32 134.78 77.611 157 214 158 191 135 74 6 7 5 9 5 3 179040 13571 1329 13081 31551;31552;31553;31554;31555;31556;31557;31558;31559;31560 36688;36689;36690;36691;36692;36693;36694;36695;36696;36697;36698;36699;36700;36701;36702;36703 36690 16 LSGAQADLHIGEGDSIR Unmodified 1737.8646 0.86457574 3147 Q9DCM0 Ethe1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 0 0 0 0 5 0 1 55.017 55.017 3 8.343E-05 18369 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.9 38.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13572 3147 13082 31561 36704 36704 1 LSGFSFK Unmodified 784.41194 0.41194006 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 0 0 0 11 0.816 1 1 1 67.128 67.128 2 0.012751 16719 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.18 40.343 1604.2 714.41 2675.2 1986.7 3446.3 1839.6 1506 751 2599 1981 3391 1818 3 1 3 2 2 2 438010 13573 1461 13083 31562;31563;31564 36705;36706;36707;36708 36708 4 LSGGGRPAER Unmodified 998.52574 0.52574104 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 1 6.5 0.5 1 1 24.914 24.914 3 0.0081912 3715 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.765 34.028 29.72 27.264 69.288 80.468 34.877 112 28 28 69 78 37 106 1 1 2 2 1 2 6505 13574 1171 13084 31565;31566 36709;36710 36710 2 LSGIMVPAPIQDLEALR Unmodified 1822.0023 0.0022551915 1476 P28658 Atxn10 Ataxin-10 yes yes 0 0 0 0 8 0 1 91.865 91.865 3 0.034526 33388 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.511 6.921 0 39.368 0 70.225 43.578 38.198 0 37 0 65 46 37 0 1 0 1 1 1 1727.9 13575 1476 13085 31567 36711 36711 1 LSGLLGLK Unmodified 799.51674 0.51673948 1280 O88848;D3Z067 Arl6 ADP-ribosylation factor-like protein 6 yes no 0 0 0 0 6.5 5.5 1 1 75.911 75.911 2 0.013678 19982 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.794 26.034 39.516 36.703 48.098 87.009 44.864 28.568 37 37 46 83 46 28 1 1 1 2 1 1 13243 13576 1280 13086 31568;31569 36712;36713 36713 2 LSGLSFK Unmodified 750.42759 0.42759012 1480 P28667 Marcksl1 MARCKS-related protein yes yes 0 0 0 0 10.5 0.5 1 1 64.174 64.174 2 0.027379 17878 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.299 20.625 202.02 0 311.25 130.99 0 84.214 190 0 294 130 0 79 2 0 2 1 0 1 35093 13577 1480 13087 31570;31571 36714;36715 36714 2 LSGLTSTLPDTVLSHLFSQEELVNNTELVQSYR Unmodified 3689.8788 0.8788354 2454 Q8BTG7 Ndrg4 Protein NDRG4 no no 0 0 0 0 9 0 1 98.343 98.343 4 0.00010361 35205 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.206 28.683 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 1459.3 13578 2454 13088 31572 36716 36716 1 LSGPGGSGSFR Unmodified 1020.4989 0.49885759 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 9.5 2.29 1 1 1 1 44.045 44.045 2 6.3594E-21 11878 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 178.95 127.49 731.16 419.69 651.73 640.84 531.63 630.83 687 433 655 631 537 606 3 2 3 4 2 4 137320 13579 1557 13089 31573;31574;31575;31576 36717;36718;36719;36720 36717 4 LSGPPDASGAVFVLGGEGLR Unmodified 1897.9898 0.98977625 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 6.5 0.5 1 1 79.897 79.897 3 1.6994E-17 28564 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.43 109.18 78.939 36.407 47.007 28.384 53.59 107.2 74 37 47 28 56 102 2 1 2 1 2 2 25737 13580 1670 13090 31577;31578 36721;36722 36722 2 LSGQDVER Unmodified 902.44576 0.44575938 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 6.25 3.96 1 1 1 1 35.994 35.994 2 0.0092074 10198 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.84 42.054 84.009 172.92 200.67 110.6 292.47 229.37 79 171 200 112 292 223 1 3 3 2 3 3 65941 13581 628;2074 13091 31579;31580;31581;31582 36723;36724;36725;36726 36723 4 LSGSNPYTTVTPQIINSK Unmodified 1919 6.5851E-06 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 8.5 0.5 1 1 68.152 68.152 3 4.3194E-08 21686 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.565 53.699 29.692 85.222 65.067 0 46.807 38.106 28 83 65 0 46 37 1 2 2 0 1 1 22481 13582 310 13092 31583;31584 36727;36728 36728 2 LSGTGSAGATIR Unmodified 1089.5778 0.57783619 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 9 2.16 1 1 1 41.33 41.33 2 5.3899E-12 9767 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.62 77.285 108.44 50.017 127.37 0 137.44 79.226 102 51 121 0 134 78 2 1 2 0 2 2 12687 13583 3022 13093 31585;31586;31587 36729;36730;36731 36730 3 LSGVSVSSDAFFPFR Unmodified 1614.8042 0.80420731 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 9.5 0.5 1 1 84.813 84.813 2 0.0026057 29458 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.732 43.987 0 39.368 0 0 46.477 47.71 0 37 0 0 46 46 0 1 0 0 1 1 7142.6 13584 2977 13094 31588;31589 36732;36733 36732 2 LSHANSAVVLSAVK Unmodified 1394.7882 0.78816332 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 9 0.816 1 1 1 54.414 54.414 4 4.3443E-05 13404 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.588 50.074 294.44 301.73 391.52 268.37 310.13 174.43 278 305 391 263 314 167 3 2 3 2 3 2 30718 13585 1203;3123 13095 31590;31591;31592 36734;36735;36736 36736 3 LSHANSAVVLSAVK Deamidation (N) 1395.7722 0.7721789 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 1 0 0 8 0 1 59.526 59.526 3 0.0007602 18404 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.246 38.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13586 1203;3123 13095 31593 36737 36737 324 1 LSHELELR Unmodified 995.53999 0.53999412 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 3.56 1 1 1 46.029 46.029 3 0.0012251 14232 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.71 67.605 49.358 68.023 125.62 138.14 66.156 69.29 46 65 121 130 65 65 1 2 2 3 2 1 34348 13587 2186 13096 31594;31595;31596 36738;36739;36740;36741 36739 4 LSIDAIAAQLLR Unmodified 1282.7609 0.76088593 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7;A0A087WRM8 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 10.5 0.5 1 1 93.399 93.399 2 1.236E-05 30392 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.08 64.061 28 0 0 0 47.137 28.503 28 0 0 0 46 28 1 0 0 0 1 1 13232 13588 35 13097 31597;31598 36742;36743 36742 2 LSIGNITAK Unmodified 915.53893 0.53893149 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 62.708 62.708 2;3 4.845E-12 17270 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 172.59 65.277 734.79 618.11 510.96 782.33 544.56 751.98 690 634 509 753 563 720 3 3 2 4 2 3 143580 13589 2960 13098 31599;31600;31601;31602 36744;36745;36746;36747 36745 4 LSILSEER Unmodified 945.51311 0.51311067 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 58.297 58.297 2 9.047E-07 18620 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 168.08 51.196 607.01 549.07 667.76 426.88 603.93 757.75 572 565 668 426 621 727 4 4 4 3 4 4 186550 13590 551 13099 31603;31604;31605;31606 36748;36749;36750;36751 36749 4 LSILYPATTGR Unmodified 1190.6659 0.66592292 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 9.25 4.82 1 1 1 1 67.279 67.279 2;3 1.1202E-25 16729 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 180.09 133.52 714.9 829.03 329.13 717.42 656.78 894.63 667 790 334 681 652 840 3 5 3 3 3 4 696340 13591 2194 13100 31607;31608;31609;31610 36752;36753;36754;36755;36756;36757 36755 6 LSIPDNDLSSLPTSIASLVNLK Unmodified 2296.2526 0.25259246 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 9 0 1 101.89 101.89 3 0.00025053 36149 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.784 29.291 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 1519.6 13592 82 13101 31611 36758 36758 1 LSISALFVTPK Unmodified 1174.6962 0.69616041 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 7.11 5.49 4 1 3 1 85.411 85.411 2;3 8.0026E-14 30041 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 149.33 113.39 798.66 1090 1196.4 683.69 1610.3 1632.3 752 1085 1181 695 1613 1567 13 15 15 11 17 15 313300 13593 1390 13102 31612;31613;31614;31615;31616;31617;31618;31619;31620 36759;36760;36761;36762;36763;36764;36765;36766;36767;36768;36769;36770;36771;36772;36773;36774;36775;36776;36777;36778;36779;36780;36781;36782;36783 36760 25 LSISGNYNLK Unmodified 1107.5924 0.59242362 1871 Q00897 Serpina1d Alpha-1-antitrypsin 1-4 yes yes 0 0 0 0 9.5 0.5 1 1 62.378 62.378 3 0.0014729 17086 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.893 29.871 0 0 68.272 46.209 0 39.442 0 0 65 46 0 37 0 0 1 1 0 1 3538.2 13594 1871 13103 31621;31622 36784;36785 36785 2 LSITVVQAK Unmodified 957.58588 0.58588168 2503 Q8C5G6;Q9QZ06;F7AT44 Tollip Toll-interacting protein yes no 0 0 0 0 7.75 3.96 1 1 1 1 62.495 62.495 2;3 5.8646E-13 17072 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 178.94 111.91 266.62 226.45 81.361 323.06 431.44 143.05 250 231 83 306 435 139 3 3 1 4 5 2 32446 13595 2503 13104 31623;31624;31625;31626 36786;36787;36788;36789;36790 36789 5 LSIVGDGK Unmodified 787.44397 0.44396847 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 8 0 1 56.864 56.864 2 0.048601 17129 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.207 14.183 0 88.312 0 0 74.768 76.75 0 83 0 0 74 74 0 1 0 0 1 1 3843.7 13596 565 13105 31627 36791 36791 1 LSIVPVR Unmodified 782.50142 0.50142377 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 0 10 0 1 58.093 58.093 2 0.032551 15126 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.244 47.223 78.189 80.776 135.42 0 67.99 0 74 83 130 0 65 0 1 1 1 0 1 0 17239 13597 1449 13106 31628 36792 36792 1 LSIWAIPSLK Unmodified 1126.675 0.67503104 903 E9Q411 Nbas yes yes 0 0 0 0 1 0 1 87.048 87.048 3 0.0025288 30996 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.303 38.746 0 9.576 0 20.767 0 9.594 0 9 0 19 0 9 0 1 0 1 0 1 926.2 13598 903 13107 31629 36793 36793 1 LSKEDIER Unmodified 988.51892 0.51892433 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 9.5 3.5 1 1 43.68 43.68 3 0.032533 12515 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.558 7.5761 1377.6 2239.2 2431.7 1992.3 2013.5 2837.8 1297 2230 2460 1990 2071 2716 2 3 3 3 2 3 242880 13599 1762 13108 31630;31631 36794;36795;36796 36795 3 LSKPCCYIFPGGR Unmodified 1553.7483 0.74828911 510;1382 A2ARP8;Q9QYR6;P14873 Map1a;Map1b Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2;Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 no no 0 0 0 1 8 4.97 1 1 1 60.198 60.198 3 5.7968E-05 14167 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.73 68.453 519.19 513.27 812.47 394.11 505.77 897 489 523 798 396 512 855 3 3 4 3 2 4 293430 13600 510;1382 13109 31632;31633;31634 36797;36798;36799;36800 36799 4 LSLAAAAGDPFAYPGAGGLYK Unmodified 2009.0258 0.025827405 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 0 10.7 1.7 1 1 1 85.431 85.431 3;4 9.4178E-12 29828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.03 87.342 127.78 45.631 126.01 81.647 121.77 0 120 46 120 83 120 0 3 1 1 1 2 0 24216 13601 573 13110 31635;31636;31637 36801;36802;36803 36801 3 LSLALPPLTLTPFPGPGPR Unmodified 1943.1244 0.12441924 191 A0A1B0GSR5;A0A0R4J0W7;Q5XJV6 Lmtk3 Serine/threonine-protein kinase LMTK3 yes no 0 0 0 0 4.67 5.19 2 1 96.957 96.957 3;4 8.3137E-08 33637 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.375 75.991 0 23.164 21.65 11.49 14.891 31.845 0 22 21 11 15 30 0 3 3 2 3 2 3640.2 13602 191 13111 31638;31639;31640 36804;36805;36806;36807;36808 36805 5 LSLDELGR Unmodified 901.4869 0.48689592 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 6.5 0.5 1 1 61.923 61.923 2 0.0012978 20162 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142.36 57.663 446.75 221.47 288.72 232.86 186.63 432.8 419 241 287 232 189 411 3 3 2 3 1 3 82082 13603 2253 13112 31641;31642 36809;36810;36811 36811 3 LSLDELHR Unmodified 981.52434 0.52434406 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 51.405 51.405 3 9.1487E-05 16081 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.47 72.559 197.28 144.8 83.3 121.88 122.69 155.08 185 148 83 112 121 148 4 3 2 2 3 3 73202 13604 2699 13113 31643;31644;31645;31646 36812;36813;36814;36815 36813 4 LSLDELHRK Unmodified 1109.6193 0.61930707 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 1 7 0 1 48.041 48.041 4 0.0014384 13585 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.149 35.958 49.131 0 38.086 38.171 0 49.036 46 0 37 37 0 46 1 0 1 1 0 1 3298.1 13605 2699 13114 31647 36816 36816 1 LSLEEFFNSAVHLLSR Unmodified 1860.9734 0.9733979 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7 Kalrn Kalirin yes no 0 0 0 0 11 0 1 102.08 102.08 3 0.030195 33790 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 33.947 15.845 0 0 9.0804 14.761 0 0 0 0 9 14 0 0 0 0 1 1 0 0 989.3 13606 545 13115 31648 36817 36817 1 LSLEEFIK Unmodified 977.54335 0.54334816 1734 P62748 Hpcal1 Hippocalcin-like protein 1 yes yes 0 0 0 0 8 0.816 1 1 1 79.762 79.762 2;3 0.011829 27935 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.853 25.596 109.04 150.12 0 19 242.67 0 102 148 0 19 232 0 1 2 0 1 2 0 20713 13607 1734 13116 31649;31650;31651 36818;36819;36820 36819 3 LSLEEFIR Unmodified 1005.5495 0.54949617 1832;2763 P84075;E9PV73;Q91X97;D3YVA2 Hpca;Ncald Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 0 8 0.816 1 1 1 76.705 76.705 2 1.5461E-32 26527 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 200.66 122.48 431 463.89 1221.1 283.79 853.16 1245.6 407 474 1168 296 869 1190 1 2 3 1 3 2 308040 13608 1832;2763 13117 31652;31653;31654 36821;36822;36823 36822 3 LSLEEFQLFFADGVLNEK Unmodified 2098.0623 0.062272491 2784 Q91ZP9 Necab2 N-terminal EF-hand calcium-binding protein 2 yes yes 0 0 0 0 13 0 1 104.6 104.6 3 0.0014124 42630 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.138 27.221 5.333 0 5.3831 0 0 20.254 5 0 5 0 0 19 1 0 1 0 0 1 986.96 13609 2784 13118 31655 36824 36824 1 LSLEELLGK Unmodified 1000.5805 0.58046195 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 9 0 1 84.134 84.134 3 0.011237 29309 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.416 26.404 0 29.792 0 70.219 43.908 28.595 0 28 0 65 46 28 0 1 0 1 1 1 4904.4 13610 967 13119 31656 36825 36825 1 LSLESEGANEGATAAPELSALEEAFR Unmodified 2661.277 0.27696931 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 6.57 4.14 2 1 2 2 90.247 90.247 3;4 3.0483E-24 34324 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.12 87.24 104.28 85.991 99.333 104.13 107.88 21.32 98 86 99 100 107 20 5 5 7 5 3 2 51651 13611 2291 13120 31657;31658;31659;31660;31661;31662;31663 36826;36827;36828;36829;36830;36831;36832;36833;36834;36835 36832 10 LSLESEGANEGATAAPELSALEEAFR Deamidation (N) 2662.261 0.26098489 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 1 0 0 4 0 1 91.978 91.978 3 1.7776E-07 33993 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.189 54.097 0 0 0 5.4303 1.8426 0 0 0 0 5 2 0 0 0 0 1 1 0 2546 13612 2291 13120 31664 36836 36836 906 1 LSLESEGANEGATAAPELSALEEAFRR Unmodified 2817.3781 0.37808033 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 1 5 0 1 82.643 82.643 3 0.026048 31431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.492 17.186 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13613 2291 13121 31665 36837 36837 1 LSLHSLCSCDIHRPLK Unmodified 1934.9819 0.98187088 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 1 10 0 1 51.712 51.712 5 1.0624E-05 12331 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.5 86.707 176.9 191.83 222.76 186.11 207.87 246.71 167 195 225 186 215 237 1 1 1 1 1 1 21210 13614 3371 13122 31666 36838 36838 1 LSLLCIDFNK Unmodified 1221.6427 0.64274463 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 11 0 1 84.699 84.699 3 0.00048294 26578 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.807 38.233 99.258 0 89.306 0 0 88.478 93 0 83 0 0 83 1 0 1 0 0 1 7739.3 13615 145 13123 31667 36839;36840 36840 2 LSLLQEVEK Unmodified 1057.6019 0.60192568 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 8 0 1 73.254 73.254 3 0.0043107 24870 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.283 31.152 0 0 29.058 27.794 57.299 0 0 0 28 28 56 0 0 0 1 1 1 0 2775.7 13616 24 13124 31668 36841 36841 1 LSLPDNDLTTLPASIANLINLR Unmodified 2363.306 0.30602501 623 B2RUJ2;B7ZNX6;Q80TH2 Erbb2ip Protein LAP2 yes no 0 0 0 0 10 0 1 106.19 106.19 3 2.0182E-06 33729 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.882 41.117 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 981.27 13617 623 13125 31669 36842 36842 1 LSLPWLLNK Unmodified 1082.6488 0.64881629 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 3.75 4.76 3 1 87.956 87.956 2;3 0.00096887 31369 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.161 45.942 30.044 20.216 0 61.432 46.222 58.377 28 19 0 57 46 56 1 1 0 3 1 2 7450.4 13618 1802 13126 31670;31671;31672;31673 36843;36844;36845;36846 36844 4 LSLSEGGLIPSSK Unmodified 1286.7082 0.70818166 2648 Q8R1T1 Chmp7 Charged multivesicular body protein 7 yes yes 0 0 0 0 8 0 1 69.82 69.82 3 0.0021006 23210 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.871 35.594 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 2954.4 13619 2648 13127 31674 36847 36847 1 LSLSNAISTVLPLTQLR Unmodified 1825.0673 0.067298289 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6.75 5.76 2 1 1 96.975 96.975 3 5.1086E-40 33400 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 161.14 116.57 43.761 21.242 29.095 53.132 60.839 25.095 41 21 28 50 61 24 5 3 3 5 6 4 16826 13620 3204 13128 31675;31676;31677;31678 36848;36849;36850;36851;36852;36853;36854;36855;36856 36848 9 LSLSNAISTVLPLTQLR Deamidation (N) 1826.0513 0.051313874 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 0 10 0 1 94.417 94.417 3 0.0076771 30754 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.208 22.255 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1740.2 13621 3204 13128 31679 36857 36857 1103 1 LSLTQDPVVK Unmodified 1098.6285 0.62847478 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 9.25 2.28 1 1 1 1 62.62 62.62 2 2.2708E-06 20546 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.75 84.037 187.49 185.39 191.59 186.24 110.88 223.89 176 186 194 177 112 213 3 3 3 3 2 3 22577 13622 1581 13129 31680;31681;31682;31683 36858;36859;36860;36861 36858 4 LSLWAAPPGPPLSGGLSPDSKPGGAPSSSR Unmodified 2842.4614 0.46135645 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 1 11 0 1 75.301 75.301 4 0.010996 22307 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.009 25.134 29.692 0 59.236 27.074 0 0 28 0 56 28 0 0 1 0 1 1 0 0 6839.8 13623 1980 13130 31684 36862 36862 1 LSMINTMSK Unmodified 1023.5093 0.50928762 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 11.3 1.25 1 1 1 63.302 63.302 2 2.8249E-08 17520 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 166.07 45.017 559.1 242.01 325.38 434.16 466.9 626.28 524 268 318 423 486 600 2 2 1 2 2 2 55940 13624 491 13131 31685;31686;31687 36863;36864;36865 36863 3 LSMKPEPLFR Unmodified 1216.6638 0.66381443 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 11.3 1.25 1 1 1 61.246 61.246 3 5.428E-05 16681 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.2 72.008 746.01 415.84 502.22 587.88 683.34 727.77 700 446 492 577 703 701 2 2 1 2 2 2 60771 13625 1382 13132 31688;31689;31690 36866;36867;36868 36866 3 LSMYGVDLHHAK Unmodified 1369.6813 0.6812554 1250;3345;526;369 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A286YDY4;Q9WV92;A7YY80;A0A286YD84;A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l2;Epb41l2;Epb41l3;Epb4.1l3;Epb4.1l1;Epb41l1 Band 4.1-like protein 2;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 1 no no 0 0 0 0 8.5 0.5 1 1 52.721 52.721 4 1.0383E-08 14281 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.22 87.839 286.45 134.99 253.21 173.8 121.91 274.75 269 149 250 167 120 261 2 2 2 1 1 2 24235 13626 1250;369;3345;526 13133 31691;31692 36869;36870 36870 2 LSNIFVIGK Unmodified 989.59097 0.59096706 1730 P62702;V9GWY0 Rps4x;Gm15013 40S ribosomal protein S4, X isoform;40S ribosomal protein S4 yes no 0 0 0 0 8 4.97 1 1 1 77.688 77.688 2;3 0.0014547 23418 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.9 50.93 108.94 227.88 122.24 0 161.03 232.06 102 223 120 0 158 222 1 3 2 0 1 3 77184 13627 1730 13134 31693;31694;31695 36871;36872;36873 36872 3 LSNNYYCTR Unmodified 1189.5186 0.51860675 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 0 7.5 0.5 1 1 44.138 44.138 2 0.0018102 11816 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.813 69.831 39.421 38.575 94.476 57.354 55.941 39.442 37 37 92 56 56 37 1 1 2 1 1 1 12348 13628 3380 13135 31696;31697 36874;36875 36874 2 LSNRPAFMPSEGR Unmodified 1460.7194 0.71943182 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 1 13 0 1 46.904 46.904 3 0.007618 14788 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.966 25.469 167.7 133.33 195.14 157.15 208.26 0 158 139 195 158 206 0 1 1 1 1 1 0 10017 13629 418;310 13136 31698 36876 36876 1 LSNVAPPCILR Unmodified 1238.6805 0.68052712 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 9 0.816 1 1 1 64.475 64.475 2 0.00031506 20688 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.642 46.106 0 58.664 103.44 146.06 216.68 104.67 0 56 102 143 217 102 0 1 2 3 3 2 51441 13630 2243 13137 31699;31700;31701 36877;36878;36879 36877 3 LSNVSSSGSINLLESPQLATLAEDVTAALAK Unmodified 3098.6347 0.63468895 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 9.25 2.28 1 1 1 1 111.97 111.97 4 3.7473E-13 37121 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.301 49.782 9.657 10.239 4.8163 16.856 18.342 7.462 9 10 5 16 18 7 1 2 1 3 2 1 5602.9 13631 1424 13138 31702;31703;31704;31705 36880;36881;36882;36883 36881 4 LSPADDELYQR Unmodified 1305.6201 0.62009493 3233 Q9JKL4 Ndufaf3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 yes yes 0 0 0 0 3.5 0.5 1 1 54.064 54.064 2 6.7462E-08 18229 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.13 85.965 29.782 17.722 29.083 0 0 0 28 19 28 0 0 0 1 1 1 0 0 0 4314.1 13632 3233 13139 31706;31707 36884;36885 36885 2 LSPAFHQALLSFCR Unmodified 1645.8399 0.83988131 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 0 12 0 1 69.544 69.544 3 0.033322 17601 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 36.928 22.496 0 69.16 0 140.2 100.25 0 0 65 0 130 102 0 0 1 0 1 1 0 7063.7 13633 35 13140 31708 36886 36886 1 LSPAVLLQGLAEVPIPSR Unmodified 1859.088 0.088033731 602 B1AWV9;Q5DTL9 Slc4a10 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger yes no 0 0 0 0 10.5 0.5 2 2 97.752 97.752 3;4 1.2822E-07 31947 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.64 88.233 9.3911 38.106 28.496 63.208 0 69.29 9 38 28 61 0 65 1 2 1 3 0 1 23492 13634 602 13141 31709;31710;31711;31712 36887;36888;36889;36890 36887 4 LSPDAIPGK Unmodified 896.49673 0.49673232 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7 0 1 57.247 57.247 2 0.040992 17981 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.859 17.814 59.302 83.284 61.595 77.211 0 69.29 56 83 65 74 0 65 1 1 1 1 0 1 5959.2 13635 1412 13142 31713 36891 36891 1 LSPEEPAPEAPETPETPEAPGGSAV Unmodified 2458.1387 0.13874449 596 B1AVF2;Q9Z2S7 Tsc22d3 TSC22 domain family protein 3 yes no 0 0 0 0 1.5 0.5 1 1 68.463 68.463 3 3.3766E-11 24839 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.703 53.344 9.657 9.576 0 20.767 14.644 9.594 9 9 0 19 14 9 1 1 0 1 1 1 7994.5 13636 596 13143 31714;31715 36892;36893 36893 2 LSPLPSLMVVTPLAQIK Unmodified 1806.0689 0.068878194 578 B1AR74;Q8CCN5;Q0VF62;F7CPM1;F7C0F2;B1AR76 Bcas3 Breast carcinoma-amplified sequence 3 homolog yes no 0 0 0 0 6.5 5.5 1 1 95.292 95.292 3;4 8.8155E-07 33269 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.41 91.788 12.8 15.097 0 53.218 18.032 9.594 12 15 0 49 19 9 1 1 0 2 1 1 3449.7 13637 578 13144 31716;31717 36894;36895 36894 2 LSPNQQR Unmodified 841.44061 0.44061443 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 8.67 3.09 1 1 1 29.194 29.194 2 0.0072967 5087 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.39 71.198 349.86 201.29 457.12 163.43 214.84 322.46 329 217 442 167 217 306 2 2 3 2 2 2 79693 13638 71;74;949;1367 13145 31718;31719;31720 36896;36897;36898 36897 3 LSPQSIYNLLPGK Unmodified 1428.7977 0.79766537 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 11.5 1.12 1 1 1 1 83.136 83.136 3 0.0010697 23065 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.042 33.073 0 109.59 0 40.093 84.855 155.87 0 103 0 37 84 148 0 3 0 2 2 3 18386 13639 2141 13146 31721;31722;31723;31724 36899;36900;36901;36902;36903 36902 5 LSPQTVNSVAK Unmodified 1142.6295 0.62953741 2209 Q6P069 Sri Sorcin yes yes 0 0 0 0 8.33 0.943 1 2 52.531 52.531 2;3 3.6555E-08 14320 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.06 71.514 0 29.478 129.15 0 113.51 115.09 0 28 121 0 111 111 0 1 2 0 1 2 6945.3 13640 2209 13147 31725;31726;31727 36904;36905;36906 36906 3 LSPSPSSR Unmodified 829.42938 0.42938104 182;1379 A0A0R4J0Q5;P21619;P14733 Lmnb2;Lmnb1 Lamin-B2;Lamin-B1 no no 0 0 0 0 10 3 1 1 32.845 32.845 2 0.0038036 6613 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.31 8.943 207.75 70.52 189.5 145.25 277.25 199.96 195 74 186 148 278 195 2 1 2 2 2 2 14873 13641 182;1379 13148 31728;31729 36907;36908 36907 2 LSPSPTSQR Unmodified 971.50361 0.50360861 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 8.5 2.69 1 1 1 1 34.684 34.684 2 0.00058776 6888 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.85 33.207 73.935 118.44 167.61 142.25 149.5 86.146 70 116 166 139 152 83 3 3 3 3 4 2 13729 13642 1580 13149 31730;31731;31732;31733 36909;36910;36911;36912 36911 4 LSPYVNYSFR Unmodified 1244.619 0.61897272 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 10 0.816 1 1 1 64.945 64.945 2;3 3.899E-06 18159 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.23 77.857 231.44 231.84 219.03 210.37 266.34 278.09 218 236 222 209 273 268 3 3 2 3 3 3 36805 13643 331 13150 31734;31735;31736 36913;36914;36915 36914 3 LSQAEETTVAQAK Unmodified 1374.6991 0.69907354 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 6 0 1 51.372 51.372 3 0.00015876 16190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.889 38.568 49.129 0 38.525 28.308 0 39.442 46 0 37 28 0 37 1 0 1 1 0 1 20859 13644 692 13151 31737 36916 36916 1 LSQAFNHWLK Unmodified 1242.6509 0.65094155 337 A0A1Y7VJZ1;Q9CZZ6;Q9WTN0;A0A1Y7VM16;A0A1Y7VNV0 Ggps1 Geranylgeranyl pyrophosphate synthase yes no 0 0 0 0 11 0 1 66.498 66.498 3 0.0017557 18419 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.069 32.655 0 218.12 0 254.26 137.9 0 0 205 0 235 143 0 0 1 0 1 1 0 12791 13645 337 13152 31738 36917 36917 1 LSQALGNITVVQK Deamidation (N) 1370.7769 0.77692993 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 1 0 0 10 0 1 70.276 70.276 3 0.020691 20661 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.527 20.2 412.18 263.47 653 509 447.49 452.01 389 284 641 509 465 436 1 1 1 1 1 1 12485 13646 1142 13153 31739 36918 36918 303 1 LSQALGNITVVQK Unmodified 1369.7929 0.79291434 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 10 0 1 70.251 70.251 2 1.754E-22 20650 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.99 85.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13647 1142 13153 31740 36919 36919 1 LSQECEK Unmodified 892.39603 0.396032 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 9.5 3.5 1 1 38.606 38.606 2 0.0086292 10489 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.95 30.399 0 67.22 116.07 0 0 69.29 0 65 111 0 0 65 0 1 1 0 0 1 5217.3 13648 1957 13154 31741;31742 36920;36921 36921 2 LSQEEQLK Unmodified 973.50803 0.50802529 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 5 0.816 1 1 1 48.393 48.393 2;3 0.0019852 15248 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.31 23.4 59.068 191.16 101.4 203.21 148.26 192.98 56 185 102 194 157 185 1 2 1 2 2 2 18596 13649 814 13155 31743;31744;31745 36922;36923;36924 36923 3 LSQEHQAYR Unmodified 1130.5469 0.54687041 1636 P56380 Nudt2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 0 6 0 1 28.901 28.901 3 0.00027297 5516 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.108 61.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13650 1636 13156 31746 36925 36925 1 LSQEVVLDVGCPYVR Unmodified 1732.8818 0.8818057 862 E9PZ88;F8WIE1;Q91W89;E9PYM7 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 0 6 0 1 72.682 72.682 3 0.01003 26074 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.695 19.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13651 862 13157 31747 36926 36926 1 LSQIGVENTEENRR Unmodified 1643.8227 0.82271092 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 1 7.75 3.11 1 1 1 1 43.001 43.001 3 0.00016712 12593 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.822 69.842 305.01 170.63 436.23 290.29 384.71 288.06 287 176 426 296 390 278 3 2 4 4 4 3 150500 13652 1308 13158 31748;31749;31750;31751 36927;36928;36929;36930 36930 4 LSQLEGVNVER Unmodified 1242.6568 0.65681479 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 9.5 3.5 1 1 57.288 57.288 2 8.2673E-10 18757 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.08 87.23 59.484 43.856 64.405 67.206 0 69.29 56 46 65 65 0 65 1 1 1 1 0 1 10770 13653 3174 13159 31752;31753 36931;36932 36931 2 LSQLQSR Unmodified 830.46102 0.46101552 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.5 0.5 1 1 40.931 40.931 2 0.017688 9627 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.22 49.509 345.17 217.05 234.01 276.11 210.65 366.02 324 222 237 269 217 349 2 1 1 2 1 2 32640 13654 2186 13160 31754;31755 36933;36934 36933 2 LSQMGVTTDGVPAQQLR Unmodified 1799.92 0.91998213 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 7 0 1 61.1 61.1 3 0.038952 19880 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.951 7.5689 0 38.231 68.036 0 75.428 57.544 0 37 65 0 74 56 0 1 1 0 1 1 22790 13655 992 13161 31756 36935 36935 1 LSQNNFALGYK Unmodified 1253.6404 0.64043645 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 10.3 1.37 2 2 1 1 63.523 63.523 2;3 1.1126E-25 19627 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 180.15 129.18 670.3 252.84 559.31 776.09 258.65 78.884 628 260 550 745 268 74 3 3 3 6 2 1 144010 13656 1141 13162 31757;31758;31759;31760;31761;31762 36936;36937;36938;36939;36940;36941 36936 6 LSQTFPNADFAEITK Unmodified 1680.8359 0.83590137 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 8.5 2.69 2 2 2 2 76.288 76.288 2;3;4 4.1359E-11 28718 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.97 85.901 79.31 85.924 155.19 144.03 229.05 164.03 74 84 149 140 232 158 2 3 5 4 6 5 92766 13657 1321 13163 31763;31764;31765;31766;31767;31768;31769;31770 36942;36943;36944;36945;36946;36947;36948;36949 36948 8 LSQYQEPIHLPGVR Unmodified 1635.8733 0.87328993 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 61.447 61.447 3 0.0014064 19929 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.599 33.72 59.91 35.328 0 48.902 73.179 57.608 56 37 0 46 74 56 1 1 0 1 1 1 2880 13658 2782 13164 31771;31772 36950;36951 36950 2 LSRPFQNQTHAK Unmodified 1425.7477 0.74769548 2327 Q80W82;Q3TQZ7;Q8C9D4;Q80W80;E9QN59;Q61831;Q9WTU6;A0A0G2JG69;A0A0G2JGL2;D3Z1Z4;A6P3E4;Q7TSJ7;G3X8U9;Q91Y86;A0A0G2JEJ8 Mapk10;Mapk9;Mapk8 Mitogen-activated protein kinase;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase 9;Mitogen-activated protein kinase 8 yes no 0 0 0 1 10 0 1 36.677 36.677 4 0.0025032 6505 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.268 37.269 337.48 220.81 259.88 0 213.05 283.87 317 233 254 0 213 272 1 1 1 0 1 1 5720 13659 2327 13165 31773 36952 36952 1 LSRPNIFILNNR Unmodified 1455.831 0.83103118 2314 Q80U63 Mfn2 Mitofusin-2 yes yes 0 0 0 1 6.5 5.5 1 1 61.043 61.043 3 0.00053067 14445 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.17 47.755 48.587 29.152 167.88 0 103.73 86.354 46 28 157 0 102 83 1 1 2 0 2 1 22352 13660 2314 13166 31774;31775 36953;36954 36954 2 LSSAMSAAK Unmodified 864.4375 0.43750288 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 10 2.16 1 1 1 49.748 49.748 2 0.00097106 13841 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.98 39.379 257.12 130.94 307.79 317.63 442.62 240.64 241 130 306 315 445 232 2 2 3 3 3 2 41989 13661 1373 13167 31776;31777;31778 36955;36956;36957 36955 3 LSSATIAAPR Unmodified 985.55564 0.55564418 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 8.33 1.25 1 1 1 47.928 47.928 2;3 3.2043E-06 13639 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.01 52.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13662 144 13168 31779;31780;31781 36958;36959;36960 36958 3 LSSAVEVSSCITTYK Unmodified 1643.8076 0.80763771 784 D3Z709;Q9D415;Q3UVU8;D3Z508 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 6 0 1 56.18 56.18 3 0.053956 18352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.827 7.8407 138.51 0 164.94 119.36 104.94 165.43 130 0 158 120 111 158 1 0 1 1 1 1 3223.2 13663 784 13169 31782 36961 36961 1 LSSFATSVAEDQSVASLTAPQTEETGK Unmodified 2753.3243 0.32431343 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.6 2.94 2 1 1 1 77.455 77.455 3;4;5 1.2841E-20 29487 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.312 68.368 158.42 184.61 156.06 92.073 138.45 175.15 149 186 159 93 139 167 3 4 4 3 3 3 18766 13664 510 13170 31783;31784;31785;31786;31787 36962;36963;36964;36965;36966 36966 5 LSSFIGAIAIGDLVK Unmodified 1502.8708 0.87083031 1823 P80314;A0A1W2P7B7;A0A1W2P6Q3 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 10.4 3.67 1 1 2 2 2 98.763 98.763 2;3;4 5.2117E-12 32418 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.76 83.692 46.743 110.68 306.96 251.19 302.39 200.58 44 109 295 248 295 197 1 5 7 6 5 7 81828 13665 1823 13171 31788;31789;31790;31791;31792;31793;31794;31795 36967;36968;36969;36970;36971;36972;36973;36974;36975;36976;36977;36978;36979;36980 36970 14 LSSFSTVGESLLYMLEK Unmodified 1902.9649 0.96486663 3181 Q9ER97 Ngb Neuroglobin yes yes 0 0 0 0 10 0 1 106.18 106.18 3 0.00081043 33739 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.193 25.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13666 3181 13172 31796 36981 36981 1 LSSGQAER Unmodified 846.41954 0.41954463 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 5 0 1 28.273 28.273 2 0.010799 5630 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.027 52.213 0 38.394 58.288 0 0 49.036 0 37 56 0 0 46 0 1 1 0 0 1 8711.1 13667 1999 13173 31797 36982 36982 1 LSSGQISGPEIK Unmodified 1214.6507 0.65066678 914 E9Q616 Ahnak yes yes 0 0 0 0 8 0 1 45.264 45.264 4 0.024177 11663 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.052 1.1354 79.182 43.605 0 0 74.072 97.024 74 46 0 0 74 93 1 1 0 0 1 1 4452.7 13668 914 13174 31798 36983 36983 1 LSSHDYSSR Unmodified 1050.473 0.47303677 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 5 0 1 29.714 29.714 3 0.0010768 6315 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.358 56.411 49.063 0 49.525 0 46.807 38.106 46 0 46 0 46 37 1 0 1 0 1 1 2382 13669 1275 13175 31799 36984 36984 1 LSSIESDV Unmodified 848.41273 0.41272792 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 6.25 3.96 1 1 1 1 66.573 66.573 2 0.012656 23884 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.643 52.056 9.657 20.216 49.772 51.371 114.4 9.594 9 19 46 47 111 9 1 1 1 1 2 1 9369 13670 1089 13176 31800;31801;31802;31803 36985;36986;36987;36988 36986 4 LSSLPFQK Unmodified 918.51747 0.51746776 1705 P61971 Nutf2 Nuclear transport factor 2 yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 66.188 66.188 2;3 0.0043172 18212 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.058 30.632 423.69 250.49 353.69 319.51 491.39 495.51 398 260 352 310 500 476 4 2 3 3 4 4 89316 13671 1705 13177 31804;31805;31806;31807;31808 36989;36990;36991;36992;36993;36994 36992 6 LSSLPVGPSFLGFR Unmodified 1475.8136 0.81364979 2494 Q8C3F2 Fam120c Constitutive coactivator of PPAR-gamma-like protein 2 yes yes 0 0 0 0 6.5 5.5 1 1 86.603 86.603 2 0.00048152 30869 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.153 33.678 0 14.824 4.2961 5.0395 9.0083 5.0729 0 14 5 5 9 5 0 1 1 1 1 1 5663 13672 2494 13178 31809;31810 36995;36996 36995 2 LSSMNPAFVMPFLR Unmodified 1608.8156 0.81564039 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 12 0 1 91.228 91.228 2 0.012515 25983 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.5 34.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13673 3243 13179 31811 36997 36997 1 LSSPATLNSR Unmodified 1044.5564 0.55637247 650 CON__P00761 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 44.245 44.245 2 6.7742E-10 13368 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.75 73.872 475.56 33.931 634.44 321.59 644.85 720.34 445 37 603 334 651 693 3 1 4 3 4 5 154380 + 13674 650 13180 31812;31813;31814;31815 36998;36999;37000;37001;37002 37002 5 LSSPVLHR Unmodified 907.52395 0.52395013 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 0 9.67 1.7 1 1 1 40.574 40.574 3 0.0010503 9427 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.71 70.583 49.128 163.74 0 149.93 106.31 174.99 46 157 0 139 112 167 1 3 0 2 2 3 41704 13675 3267 13181 31816;31817;31818 37003;37004;37005 37003 3 LSSPVTYIDQTDDNIIIETLNHEHYECK Unmodified 3346.5664 0.56635139 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 4 0 1 81.396 81.396 4 0.0008507 30653 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.153 28.731 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1005.2 13676 2168 13182 31819 37006 37006 1 LSSQYAAVFGAPGHALHPGEPALGEVEER Unmodified 2988.473 0.47298377 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7 0.816 1 1 1 66.514 66.514 4 7.0534E-26 23115 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.554 68.813 108.7 36.268 95.405 111.05 44.809 107.45 102 37 93 111 46 102 3 1 3 3 2 3 33873 13677 510 13183 31820;31821;31822 37007;37008;37009;37010 37007 4 LSSSSQHSR Unmodified 987.47337 0.47337112 1140 J3QK20;Q8R0S4 Cacnb4 Voltage-dependent L-type calcium channel subunit beta-4 yes no 0 0 0 0 6 0 1 18.69 18.69 3 0.00020194 2649 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.88 77.407 0 9.576 0 7.651 0 12.792 0 9 0 7 0 12 0 1 0 1 0 1 456.73 13678 1140 13184 31823 37011 37011 1 LSSTWEGIQAGK Unmodified 1275.6459 0.64591575 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 8 0 1 64.037 64.037 3 0.0064089 20423 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.116 24.178 166.87 237.86 246.52 247.65 289.39 288.09 158 238 252 245 297 278 1 1 1 1 1 1 14989 13679 246 13185 31824 37012 37012 1 LSSVDSVLK Unmodified 946.53351 0.53351176 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 7 0 1 63.877 63.877 2 0.026936 21021 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.828 25.391 108.88 0 94.667 0 118.56 80.831 102 0 88 0 116 79 1 0 1 0 1 1 5565.6 13680 513 13186 31825 37013 37013 1 LSTASCPTPK Unmodified 1060.5223 0.52229515 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 8 0 1 44.066 44.066 3 0.0014834 11101 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.1 26.588 68.92 53.376 93.361 83.397 93.447 0 65 56 93 83 93 0 1 1 1 1 1 0 5628.7 13681 416 13187 31826 37014 37014 1 LSTDDLNSLIAHAHR Unmodified 1661.8485 0.84853174 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7 1 1 1 62.136 62.136 4 0.00066432 21107 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.294 36.058 0 113.94 0 60.38 44.031 38.186 0 111 0 56 46 37 0 2 0 1 1 1 12388 13682 2517 13188 31827;31828 37015;37016 37015 2 LSTEPSPEFSNYSEIAK Unmodified 1897.8945 0.89453846 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 5 0 1 67.714 67.714 3 1.0587E-08 24269 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.92 85.196 39.293 48.944 68.512 36.358 65.345 136.72 37 46 65 37 65 130 1 1 1 1 1 2 11262 13683 2886 13189 31829 37017;37018 37017 2 LSTEPSPEFSNYSEIAK Deamidation (N) 1898.8786 0.87855405 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 1 0 0 13 0 1 67.211 67.211 3 0.00030372 24653 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.918 45.085 0 118.1 0 159.9 99.347 0 0 111 0 148 102 0 0 1 0 1 1 0 6706.4 13684 2886 13189 31830 37019 37019 1018 1 LSTFAILAQQPR Unmodified 1343.7561 0.75613491 2345 Q80ZF8;Q68FL1 Bai3;Adgrb3 Brain-specific angiogenesis inhibitor 3 yes no 0 0 0 0 12 0 1 73.554 73.554 3 0.012552 19073 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 45.915 27.604 20.244 28.427 0 20.767 0 20.254 19 28 0 19 0 19 1 1 0 1 0 1 4864.1 13685 2345 13190 31831 37020 37020 1 LSTFVPYQDR Unmodified 1224.6139 0.61388734 1018 F7BJK1 Pcdh1 yes yes 0 0 0 0 9 0 1 62.819 62.819 2 0.011171 19245 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.82 40.79 0 39.368 0 60.57 33.903 58.729 0 37 0 56 37 56 0 1 0 1 1 1 5818.9 13686 1018 13191 31832 37021 37021 1 LSTIALALGVER Unmodified 1241.7343 0.73433683 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;G3UXQ1;H3BJ83 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 11.2 1.07 2 2 1 1 81.845 81.845 2;3 0.00015374 25583 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.697 62.523 0 184.9 20.558 0 162.95 183.3 0 176 19 0 158 176 0 4 1 0 4 3 260530 13687 2272 13192 31833;31834;31835;31836;31837;31838 37022;37023;37024;37025;37026;37027;37028 37025 7 LSTLCPSAVLQR Unmodified 1343.7231 0.72312022 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 10 0.816 1 1 1 65.167 65.167 2 8.1822E-13 18238 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.51 69.922 126.81 63.104 0 118.71 138.99 27.705 121 65 0 111 139 28 3 2 0 2 2 1 20633 13688 2264 13193 31839;31840;31841 37029;37030;37031 37030 3 LSTLVETTLK Unmodified 1103.6438 0.64379049 2080 Q60676 Ppp5c Serine/threonine-protein phosphatase 5 yes yes 0 0 0 0 9 0 1 74.195 74.195 2 3.6776E-07 24589 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.08 80.799 0 69.16 0 0 103.76 85.517 0 65 0 0 102 83 0 1 0 0 1 1 8059.1 13689 2080 13194 31842 37032 37032 1 LSTMETGTGLIR Unmodified 1277.6649 0.66493664 2178 Q64514;A0A087WRC0;Q05DJ9 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 7 0 1 61.718 61.718 2 0.010718 20072 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.743 24.999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13690 2178 13195 31843 37033 37033 1 LSTPLVAVGNAK Unmodified 1168.6816 0.68157298 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 9 0 1 64.411 64.411 2 8.4044E-05 19982 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.692 51.609 9.3053 38.295 26.659 29.015 0 0 9 37 28 28 0 0 1 1 1 1 0 0 2779.7 13691 934 13196 31844 37034 37034 1 LSTSEER Unmodified 820.39266 0.39266118 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 0 4 0 1 30.793 30.793 2 0.02649 7229 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.42 48.963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13692 459 13197 31845 37035 37035 1 LSTSSLSSTGSSSLLEDSEDDLLSDSESR Unmodified 3003.3528 0.3527726 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 4 0 1 79.874 79.874 3 1.0023E-32 29914 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.79 96.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2388.5 13693 2629 13198 31846 37036 37036 1 LSTVASTDILATVLEEMPPFPER Unmodified 2515.288 0.28799169 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 108.37 108.37 3;4 8.4931E-17 36835 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.92 91.962 2.146 4.256 0 1.093 9.0568 10.402 2 4 0 1 9 10 1 2 0 1 3 3 6590.6 13694 1401 13199 31847;31848;31849;31850 37037;37038;37039;37040;37041 37040 5 LSTWAGALLR Unmodified 1086.6186 0.61857879 2391 Q8BGX2 Uncharacterized protein C19orf52 homolog yes yes 0 0 0 0 6.5 5.5 1 1 77.264 77.264 2 5.7803E-05 20727 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.71 65.319 315.99 140.85 332.21 299.5 346.69 347.45 297 149 325 288 356 334 3 2 2 2 3 2 20050 13695 2391 13200 31851;31852 37042;37043;37044 37044 3 LSVAAQEAAR Unmodified 1014.5458 0.54580778 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 13 0 1 43.36 43.36 2 0.01152 13089 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.32 26.939 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13696 3266 13201 31853 37045 37045 1 LSVAGNCR Unmodified 875.42834 0.42833518 2736 Q91VD9;A0A087WQR0;A0A087WP77;A0A087WR47 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 7 0 1 37.91 37.91 2 0.011497 8885 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.195 50.799 99.426 72.032 0 100.15 79.586 76.613 93 74 0 93 83 74 1 1 0 1 1 1 11084 13697 2736 13202 31854 37046 37046 1 LSVDYGK Unmodified 780.40177 0.4017693 1313;1794;44 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 8.57 2.19 1 2 1 1 1 1 53.032 53.032 2;3 0.0050814 15947 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.07 13.2 5009.8 3898.5 4265.4 3758.3 5259 4841.8 4710 4020 4331 3715 5337 4681 8 9 9 7 8 8 3286600 13698 44;1313;1794 13203 31855;31856;31857;31858;31859;31860;31861 37047;37048;37049;37050;37051;37052;37053;37054;37055;37056 37048 10 LSVDYGKK Unmodified 908.49673 0.49673232 1313;1794;44 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214 Tuba4a;Tuba1b;Tuba1a;Tuba3a Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 1 9 4.24 1 1 1 1 1 48.83 48.83 3 0.013587 11140 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.301 31.055 7304.5 6248.9 8000.2 7378.3 7049.1 8217.1 6880 6458 8047 7308 7318 7897 4 4 4 5 4 5 925490 13699 44;1313;1794 13204 31862;31863;31864;31865;31866 37057;37058;37059;37060;37061 37059 5 LSVEGFAVDK Unmodified 1063.555 0.55497548 1899 Q11011;F6QYF8 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 8.5 2.69 1 1 1 1 68.667 68.667 2;3 1.1637E-07 23375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142 77.904 187.4 230.53 220.04 227.09 349.62 316.22 176 232 223 223 353 306 3 4 3 3 3 3 49169 13700 1899 13205 31867;31868;31869;31870 37062;37063;37064;37065 37063 4 LSVEIWDWDLTSR Unmodified 1618.7991 0.79912193 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 10 3 1 1 90.618 90.618 2;3 0.0026205 33623 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.267 39.152 0 29.321 28.173 8.1579 0 20.254 0 28 28 9 0 19 0 1 1 1 0 1 2244.5 13701 1796 13206 31871;31872 37066;37067 37066 2 LSVELTSSLFR Unmodified 1250.6871 0.68705229 1878 Q02248;F7CRC6 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 9 0 1 79.549 79.549 3 0.0034799 27163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.836 36.289 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13702 1878 13207 31873 37068 37068 1 LSVEVWDWDR Unmodified 1303.6197 0.619701 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 6.5 0.5 1 1 80.207 80.207 2 4.0456E-05 29479 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.91 71.721 96.068 55.678 37.111 51.812 33.268 77.935 90 59 37 50 34 74 2 2 1 2 1 2 9229.5 13703 1783 13208 31874;31875 37069;37070;37071 37069 3 LSVFQTINK Unmodified 1048.5917 0.59169534 1616 P53986 Slc16a1 Monocarboxylate transporter 1 yes yes 0 0 0 0 11 0 1 68.681 68.681 2 0.0031437 19485 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.867 48.059 89.059 0 0 50.278 0 0 83 0 0 46 0 0 1 0 0 1 0 0 6481.8 13704 1616 13209 31876 37072 37072 1 LSVHINKK Unmodified 937.5709 0.57090032 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 1 11 1 1 1 43.483 43.483 4 0.0092363 9199 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.565 26.007 152.59 72.43 82.012 138.61 157.86 0 143 74 83 134 157 0 2 1 1 2 2 0 5756.1 13705 2012 13210 31877;31878 37073;37074 37073 2 LSVLDLPLQPFSGWLYLQDQNK Unmodified 2573.353 0.3529752 2791 Q920N7 Syt12 Synaptotagmin-12 yes yes 0 0 0 0 11 0 1 109 109 4 0.048395 35592 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 27.32 14.657 0 9.2416 20.004 0 0 9.594 0 9 19 0 0 9 0 1 1 0 0 1 1397.5 13706 2791 13211 31879 37075 37075 1 LSVLGAITSVQQR Unmodified 1370.7882 0.78816332 2474 Q8BWY3 Etf1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 0 6.5 5.5 1 1 74.358 74.358 3 6.4808E-05 25494 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.747 72.214 60.031 0 9.5868 0 0 89.544 56 0 9 0 0 84 2 0 1 0 0 2 28010 13707 2474 13212 31880;31881 37076;37077;37078 37076 3 LSVNSHFMK Unmodified 1061.5328 0.53280025 1010 F6ZFT1;F8WJ64;Q9CR21 Ndufab1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 0 0 7 4.32 1 1 1 51.745 51.745 3 0.00029754 12118 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.913 60.292 318.72 0 354.25 221.36 416.12 379.35 299 0 338 229 420 367 1 0 1 1 1 1 30426 13708 1010 13213 31882;31883;31884 37079;37080;37081 37081 3 LSVNSHFMK Deamidation (N) 1062.5168 0.51681584 1010 F6ZFT1;F8WJ64;Q9CR21 Ndufab1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 1 0 0 8 0 1 58.003 58.003 3 0.013321 17651 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.426 39.045 89.059 0 0 0 84.191 76.482 83 0 0 0 83 74 1 0 0 0 1 1 4255.7 13709 1010 13213 31885 37082 37082 268 1 LSVNSVTAGDYSR Unmodified 1367.6681 0.66810776 2152 Q62348 Tsn Translin yes yes 0 0 0 0 10 3 1 1 54.029 54.029 2 5.1248E-07 16535 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.84 94.238 20.244 28.427 0 61.208 0 59.696 19 28 0 56 0 56 1 1 0 1 0 2 6465.4 13710 2152 13214 31886;31887 37083;37084 37083 2 LSVPATFMLVSLDEGPGPPIK Unmodified 2167.1599 0.15987805 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 10 0 1 97.08 97.08 4 7.3974E-08 31788 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.148 53.025 20.387 0 0 15.302 0 0 19 0 0 14 0 0 1 0 0 1 0 0 620.87 13711 1813 13215 31888 37085 37085 1 LSVPTYGLQCTQAAPLDSIPNLAAYYIDCIK Unmodified 3454.7153 0.71526423 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9.5 0.5 1 1 105.62 105.62 4 9.9889E-06 33647 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.356 33.473 5.365 9 0 15.302 0 0 5 9 0 14 0 0 1 1 0 1 0 0 4213.7 13712 1412 13216 31889;31890 37086;37087 37087 2 LSVSVTQLDPK Unmodified 1185.6605 0.66050319 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 8 0 1 66.36 66.36 3 0.00085244 21622 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.536 28.534 69.051 63.454 62.791 75.957 62.878 47.242 65 65 65 74 65 46 1 1 1 1 1 1 3787.2 13713 2674 13217 31891 37088 37088 1 LSVSVTQLDPKEEELSLQDITMR Unmodified 2630.3473 0.34729748 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 1 5.5 0.5 1 1 81.506 81.506 4 0.0030271 30125 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.682 28.2 39.147 56.185 45.423 38.291 28.483 20.254 37 56 46 38 28 19 1 1 1 2 1 1 3277.4 13714 2674 13218 31892;31893 37089;37090 37090 2 LSVTATR Unmodified 746.42865 0.42865276 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 0 8 0.816 1 1 1 39.969 39.969 2 0.0046307 9125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.34 69.842 1150.1 1013 1146 1003.7 823.96 1438 1083 1043 1162 995 841 1371 3 3 3 3 2 3 140440 13715 3117 13219 31894;31895;31896 37091;37092;37093 37092 3 LSVVYTNTYAK Unmodified 1257.6605 0.66050319 685 Q9R1V6;D3YUP9;D3YUQ0 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 10.5 0.5 1 1 61.87 61.87 2;3 0.00025452 16417 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.171 43.893 157.55 140.85 104.01 173.7 163.88 203.88 148 144 111 167 171 195 1 2 1 1 2 1 16048 13716 685 13220 31897;31898 37094;37095 37095 2 LSVWAVSLQGK Unmodified 1186.671 0.67100829 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 6 5 1 1 76.712 76.712 3 0.0011669 26604 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.82 44.043 108.34 83.479 114.83 114.48 28.291 68.483 102 84 112 111 28 65 3 2 1 2 1 2 8398.9 13717 2323 13221 31899;31900 37096;37097;37098 37096 3 LSVYDVK Unmodified 822.44872 0.4487195 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 7 0 1 59.268 59.268 2 0.04575 18910 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.674 20.571 0 77.672 63.654 45.244 65.912 0 0 74 65 46 65 0 0 1 1 1 1 0 2423.6 13718 677 13222 31901 37099 37099 1 LSVYQAMK Unmodified 938.48954 0.48953845 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 60.04 60.04 2 0.010851 16083 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.815 58.088 0 38.265 65.97 46.346 0 99.138 0 37 65 46 0 93 0 1 1 1 0 1 5407.8 13719 3266 13223 31902 37100 37100 1 LSVYTALQR Unmodified 1049.5869 0.58694431 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 60.393 60.393 2 0.022392 16232 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.558 23.015 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13720 3266 13224 31903 37101 37101 1 LSYTQLLK Unmodified 964.55933 0.55933258 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 68.727 68.727 2 0.01236 19868 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.698 23.44 0 0 0 0 158 0 0 0 0 0 158 0 0 0 0 0 1 0 13312 13721 3266 13225 31904 37102 37102 1 LTAALLESTANVK Unmodified 1329.7504 0.75038083 3402 Q9Z2Y3;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 9 0.816 1 1 1 74.164 74.164 3 5.9296E-05 24487 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.417 70.563 137.87 157.04 42.491 159.7 33.185 177.08 129 157 46 149 37 167 2 3 1 2 1 3 41036 13722 3402 13226 31905;31906;31907 37103;37104;37105 37104 3 LTAAVLLAK Unmodified 898.58515 0.5851534 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 9 4.64 1 1 2 72.911 72.911 2;3 0.00067874 21318 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.27 69.235 519.28 425.73 188.72 519.26 270.66 515.45 487 436 192 488 278 490 4 4 2 3 3 3 123390 13723 2513 13227 31908;31909;31910;31911 37106;37107;37108;37109 37107 4 LTADFRDDPDPR Unmodified 1416.6634 0.66335673 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 1 5 1 1 1 48.968 48.968 3 0.0012231 15785 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.879 44.275 534.02 0 597.17 524.62 375.38 618.23 501 0 576 519 393 590 2 0 2 2 1 2 97976 13724 1311 13228 31912;31913 37110;37111 37110 2 LTAEELLNK Unmodified 1029.5706 0.57062555 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 6.67 0.471 1 2 67.795 67.795 2;3 0.00072766 22910 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.89 40.991 128.9 136.32 65.412 44.612 198.71 93.468 121 139 65 46 195 93 2 3 1 1 2 2 13343 13725 1983 13229 31914;31915;31916 37112;37113;37114 37113 3 LTAEELLNKDFAK Unmodified 1490.7981 0.7980593 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 1 8 0.816 1 1 1 71.534 71.534 3;4 0.00031551 24005 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.536 62.733 188.14 117.38 74.474 195.32 130.11 183.9 176 121 74 185 139 176 2 2 1 2 2 2 20529 13726 1983 13230 31917;31918;31919 37115;37116;37117 37116 3 LTAEVENAK Unmodified 973.50803 0.50802529 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385 yes no 0 0 0 0 8 3.56 1 1 1 50.655 50.655 2 0.010773 16410 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.424 41.046 49.956 38.915 106.92 19.151 63.293 521.6 47 37 102 19 65 491 2 1 3 1 1 3 11403 + 13727 648 13231 31920;31921;31922 37118;37119;37120 37120 3 LTAFEEAIPK Unmodified 1117.6019 0.60192568 1937 Q3TVK3;Q9Z2W0;Q8BPW9 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 9 2.94 1 1 1 72.54 72.54 3 0.0012603 27078 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.79 45.692 99.534 17.742 27.807 59.221 93.346 115.66 93 19 28 56 93 111 3 1 1 2 2 3 7012 13728 1937 13232 31923;31924;31925 37121;37122;37123 37123 3 LTAFVNTLNGK Deamidation (N) 1177.6343 0.63428844 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 1 0 0 10.7 1.7 1 1 1 72.917 72.917 2;3 9.495E-07 21997 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.52 67.393 99.233 74.71 88.163 56.694 121.65 97.264 93 74 84 56 121 93 2 1 2 1 2 2 12318 13729 1183 13233 31926;31927;31928 37124;37125;37126 37125 320;321 3 LTAFVNTLNGK 2 Deamidation (N) 1178.6183 0.61830402 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 2 0 0 9 0 1 72.926 72.926 2 0.044728 24075 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.566 33.582 0 38.257 66.448 35.606 46.48 0 0 37 65 37 46 0 0 1 1 1 1 0 2988.7 13730 1183 13233 31929 37127 37127 320;321 1 LTALPDYTLTLR Unmodified 1375.7711 0.77111627 462 A2AGI2;Q8BYM5;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 9 0 1 77.667 77.667 3 3.4895E-06 26249 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.35 70.164 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 5705.1 13731 462 13234 31930 37128 37128 1 LTAMLISSK Unmodified 962.54705 0.54705333 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 12 0 1 70.443 70.443 2 0.0041313 17911 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.806 54.966 59.656 44.337 34.965 47.33 45.942 0 56 46 37 46 46 0 1 1 1 1 1 0 4289.6 13732 240 13235 31931 37129 37129 1 LTASAPGYLAITK Unmodified 1304.734 0.73400248 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 10.6 1.36 1 2 1 1 68.732 68.732 2;3 5.4731E-15 19937 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.7 89.396 287.5 148.52 179.79 171.66 327.93 263.56 269 148 176 167 324 251 4 2 3 3 3 3 74547 13733 1868 13236 31932;31933;31934;31935;31936 37130;37131;37132;37133;37134 37131 5 LTAVLAGYGVELR Unmodified 1360.7715 0.77145062 558 A6MDD2;Q60673 Ptprn Receptor-type tyrosine-protein phosphatase-like N yes no 0 0 0 0 10.3 0.471 2 1 81.726 81.726 2;3 0.0067122 25344 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.467 31.441 80.1 74.399 0 20.767 38.702 29.848 75 75 0 19 37 28 3 3 0 1 1 1 10764 13734 558 13237 31937;31938;31939 37135;37136;37137 37137 3 LTAVSVGVQGSGWGWLGFNK Unmodified 2062.0636 0.063609895 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 8.67 5.44 1 1 1 91.512 91.512 3 2.432E-09 26010 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.917 61.635 20.387 9.576 12.984 23.353 36.86 31.994 19 9 12 22 37 31 1 1 1 2 2 3 5237.1 13735 1336 13238 31940;31941;31942 37138;37139;37140;37141 37139 4 LTDADAMK Unmodified 863.40587 0.4058684 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 5.5 0.5 1 1 51.347 51.347 2;3 0.0026789 16618 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.833 40.407 423.63 241.87 371.27 254.58 83.495 329.14 398 260 369 248 83 311 2 2 2 1 1 2 41387 13736 1881 13239 31943;31944 37142;37143 37142 2 LTDEEIEMTR Unmodified 1235.5704 0.57036755 3137 Q9DC61;A2AIW9 Pmpca Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 0 3 0 1 55.939 55.939 2 0.0051496 19435 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.228 47.716 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 2402.9 13737 3137 13240 31945 37144 37144 1 LTDFGFCAQITPEQSK Unmodified 1840.8665 0.86654957 1099;2106;2556 Q8CIN4;G5E884;O88643;Q61036 Pak2;Pak1;Pak3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 0 0 0 7.67 0.471 1 2 76.254 76.254 3;4 9.3549E-06 26830 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.376 57.012 139.24 27.469 18.76 0 86.857 98.6 130 28 19 0 84 93 3 1 1 0 2 2 19205 13738 2556;1099;2106 13241 31946;31947;31948 37145;37146;37147 37145 3 LTDFNFLMVLGK Unmodified 1396.7425 0.74245868 1796;2030;1425 P68404;P20444;Q4VA93 Prkcb;Prkca Protein kinase C beta type;Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 11.5 1.12 1 1 1 1 100.3 100.3 3 2.2533E-05 28449 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.925 71.294 142.35 85.016 43.831 253.72 172.44 81.933 133 82 43 237 177 79 4 4 2 6 5 3 51177 13739 1796;1425;2030 13242 31949;31950;31951;31952 37148;37149;37150;37151;37152;37153;37154;37155 37153 8 LTDFNFLMVLGK Oxidation (M) 1412.7374 0.7373733 1796;2030;1425 P68404;P20444;Q4VA93 Prkcb;Prkca Protein kinase C beta type;Protein kinase C alpha type;Protein kinase C no no 0 0 1 0 11.5 0.5 1 1 96.294 96.294 3 0.00053538 27566 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.958 47.764 0 28 0 0 0 12 0 28 0 0 0 12 0 1 0 0 0 1 6233.6 13740 1796;1425;2030 13242 31953;31954 37156;37157 37157 98 2 LTDIHGNALQYNK Unmodified 1485.7576 0.75759147 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 7.5 0.5 1 1 53.927 53.927 3 1.7988E-07 16375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.29 65.036 99.474 120.59 86.318 79.176 90.691 174.37 93 121 83 74 93 166 1 2 1 1 1 2 19924 13741 255;3362 13243 31955;31956 37158;37159 37158 2 LTDIINNDHENVK Unmodified 1523.758 0.7579854 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 6 0 1 57.322 57.322 3 0.00040063 18812 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.964 40.554 78.705 53.069 72.249 95.132 117.53 105.38 74 56 74 93 120 102 1 1 1 1 1 1 5882.6 13742 1994 13244 31957 37160 37160 1 LTDIQYGR Unmodified 964.49779 0.49779495 1443 Q8CBC8;P24288 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 6.5 0.5 1 1 51.955 51.955 2 0.0073032 15433 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.81 44.836 133.52 119.74 0 59.075 183.44 61.961 125 121 0 56 180 60 2 2 0 1 2 1 20541 13743 1443 13245 31958;31959 37161;37162 37162 2 LTDPIPTTETSIAPR Unmodified 1610.8516 0.85155143 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 5.5 0.5 1 1 64.218 64.218 2 4.0176E-05 22597 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.744 44.08 34.336 0 0 0 28.291 29.041 32 0 0 0 28 28 1 0 0 0 1 1 7014.6 13744 1983 13246 31960;31961 37163;37164 37163 2 LTDPSLLYLEVSTLVSK Unmodified 1877.0397 0.039746135 2198 Q6KAR6 Exoc3 Exocyst complex component 3 yes yes 0 0 0 0 9 0 1 104.21 104.21 3 3.8999E-06 36704 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.819 54.681 0 15 0 0 0 0 0 15 0 0 0 0 0 1 0 0 0 0 1767.3 13745 2198 13247 31962 37165 37165 1 LTDQLPLIIVCDR Unmodified 1554.844 0.84396364 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 83.208 83.208 2;3 3.4426E-18 29511 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 144.51 58.556 79.815 85.995 142.77 104.64 131.58 58.889 75 84 140 102 130 56 3 2 3 4 3 2 76538 13746 2185 13248 31963;31964;31965;31966;31967 37166;37167;37168;37169;37170 37168 5 LTDSQNFDEYMK Unmodified 1489.6395 0.63950975 874 E9Q0H6;P51880 Fabp7 Fatty acid-binding protein, brain yes no 0 0 0 0 5.5 0.5 1 1 66.452 66.452 3 0.00022101 23720 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.548 50.885 78.633 83.09 58.824 0 56.948 116.7 74 84 56 0 56 111 2 2 1 0 1 2 4550.6 13747 874 13249 31968;31969 37171;37172 37171 2 LTDVAEECQNNQLK Unmodified 1660.7726 0.77264919 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 5 0 1 56.53 56.53 3 0.00017366 19131 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.716 43.568 0 48.944 0 30.604 0 0 0 46 0 28 0 0 0 1 0 1 0 0 2585.2 13748 3373 13250 31970 37173 37173 1 LTDYVAFLEN Unmodified 1183.5761 0.57610486 2678 Q8VBV7 Cops8 COP9 signalosome complex subunit 8 yes yes 0 0 0 0 13 0 1 93.873 93.873 2 0.0046119 37534 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.677 56.776 0 29.181 36.579 38.261 0 0 0 28 37 37 0 0 0 1 1 1 0 0 7697.6 13749 2678 13251 31971 37174 37174 1 LTEAAEQNK Unmodified 1002.4982 0.49818889 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 7 3.54 1 1 1 1 43.039 43.039 2;3 0.00078367 12620 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.3 60.046 483.24 299.19 401.46 227.08 430.49 510.06 454 315 399 223 436 490 4 3 3 2 3 4 72381 13750 154 13252 31972;31973;31974;31975 37175;37176;37177;37178 37176 4 LTEACAHLR Unmodified 1069.5339 0.53386288 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 6 0 1 39.552 39.552 3 0.034543 10521 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.282 25.846 59.663 84.289 0 58.898 122.81 0 56 83 0 56 120 0 1 1 0 1 1 0 3576.4 13751 1670 13253 31976 37179 37179 1 LTEAVSAFGK Unmodified 1021.5444 0.5444108 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 9 0 1 67.143 67.143 2 0.013249 21353 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.78 24.052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11106 13752 1275 13254 31977 37180 37180 1 LTECLETILNK Unmodified 1332.6959 0.69590241 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 83.042 83.042 2;3 1.0071E-05 29427 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.283 63.323 49.358 29.792 30.296 49.256 186.19 116.23 46 28 28 46 186 112 1 1 1 1 5 3 36488 13753 1401 13255 31978;31979;31980;31981 37181;37182;37183;37184;37185 37182 5 LTEDDETFLSANASAVLSQFEK Unmodified 2414.1489 0.14891525 2610 Q8K3C3 Lzic Protein LZIC yes yes 0 0 0 0 6 0 2 96.263 96.263 3;4 2.5348E-15 36391 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.635 64.94 0 9.1692 24.336 0 23.569 14.251 0 9 23 0 23 14 0 1 1 0 1 1 554.52 13754 2610 13256 31982;31983 37186;37187 37187 2 LTEDLEYHELLDR Unmodified 1644.7995 0.79951586 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 0 0 0 3 0 1 65.962 65.962 3 4.4041E-05 23962 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.273 76.536 29.87 0 29.314 18.662 19.017 0 28 0 28 19 19 0 1 0 1 1 1 0 3570.7 13755 1910 13257 31984 37188 37188 1 LTEDSGYVR Unmodified 1038.4982 0.49818889 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 4.5 0.5 1 1 45.281 45.281 2 0.0027847 14035 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.467 49.02 108.37 59.674 130.34 114.65 0 69.29 102 65 129 112 0 65 2 2 2 2 0 1 10523 13756 692 13258 31985;31986 37189;37190 37189 2 LTEELAVANNR Unmodified 1228.6412 0.64116473 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 7.33 4.03 1 1 1 55.465 55.465 2 0.00055893 18906 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.489 50.977 29.754 57.578 0 39.785 34.858 58.701 28 56 0 37 37 56 1 1 0 1 1 1 5244.5 13757 3056 13259 31987;31988;31989 37191;37192;37193 37191 3 LTEEQAK Unmodified 817.41815 0.41814765 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 5 0 1 41.222 41.222 3 0.028465 11732 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.917 0 20.147 47.585 0 30.604 0 29.848 19 46 0 28 0 28 1 1 0 1 0 1 1173.8 13758 690 13260 31990 37194 37194 1 LTEEQAR Unmodified 845.4243 0.42429566 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg1 Disks large homolog 1 yes no 0 0 0 0 4 0 1 31.38 31.38 2 0.026481 7446 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.375 0 29.539 46.189 45.664 26.664 64.778 57.848 28 46 46 28 65 56 1 1 1 1 1 1 22023 13759 767 13261 31991 37195 37195 1 LTELEATVR Unmodified 1030.5659 0.56587452 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 8 3.56 1 1 1 59.718 59.718 2 0.0010093 20728 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.47 60.574 404.39 331.9 282.42 375.97 346.73 396.29 380 342 287 361 361 380 4 4 3 3 4 3 36823 13760 2844 13262 31992;31993;31994 37196;37197;37198;37199 37196 4 LTELVLQAHR Unmodified 1178.6772 0.6771563 1947 Q3TYH2;Q8K386;D3Z1A7;D3YTZ8;D3YWS1 Rab15 Ras-related protein Rab-15 yes no 0 0 0 0 9 0 1 58.275 58.275 3 5.6551E-06 17075 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.111 67.674 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13761 1947 13263 31995 37200 37200 1 LTENLVALK Unmodified 999.59645 0.59644637 308 A0A1L1SUS7;Q04899;Q8K0D0 Cdk18;Cdk17 Cyclin-dependent kinase 18;Cyclin-dependent kinase 17 yes no 0 0 0 0 8 0 1 68.867 68.867 2 0.015753 22789 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.847 15.681 39.701 0 0 29.933 35.678 48.018 37 0 0 28 37 46 1 0 0 1 1 1 2500.4 13762 308 13264 31996 37201 37201 1 LTENVYK Unmodified 865.45453 0.45453316 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 10 3 1 1 50.838 50.838 2 0.027593 16529 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.253 32.6 87.86 297.64 108.02 271.59 269.12 298.26 83 287 111 259 279 287 1 2 1 2 2 2 21184 13763 607 13265 31997;31998 37202;37203 37203 2 LTESLHEVYEPDWYGR Unmodified 1992.9218 0.92175626 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 5.5 0.5 1 1 68.45 68.45 3 5.2557E-33 24666 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 146.48 128.56 39.253 85.043 100.86 94.414 101.74 96.235 37 84 102 93 102 93 1 2 2 2 2 2 27727 13764 90 13266 31999;32000 37204;37205;37206 37205 3 LTESLNIFETIVNNR Unmodified 1761.9261 0.92611336 1465 P27601 Gna13 Guanine nucleotide-binding protein subunit alpha-13 yes yes 0 0 0 0 9.5 0.5 1 1 93.671 93.671 3 0.001092 30537 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.402 41.525 0 19 9 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 6173 13765 1465 13267 32001;32002 37207;37208 37208 2 LTETCFLDCVK Unmodified 1384.6367 0.63667298 3347 Q9WV98;A0A1Y7VL11;A0A1Y7VIZ6 Timm9 Mitochondrial import inner membrane translocase subunit Tim9 yes no 0 0 0 0 8.67 3.09 1 1 1 71.153 71.153 3 1.4862E-05 24533 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.734 54.106 88.364 110.29 111.03 45.081 159.84 67.206 83 111 111 46 157 65 1 2 2 1 2 1 17344 13766 3347 13268 32003;32004;32005 37209;37210;37211 37210 3 LTEVPALVHK Unmodified 1105.6495 0.64954457 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 8 0 1 59.747 59.747 3 0.0020076 18457 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.19 50.299 39.117 35.594 67.997 0 56.948 47.411 37 37 65 0 56 46 1 1 1 0 1 1 5733.3 13767 2141 13269 32006 37212 37212 1 LTFDSSFSPNTGK Unmodified 1399.662 0.66195975 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 9.5 1.89 1 1 1 2 1 67.001 67.001 2;3 1.4929E-21 21176 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 160.67 121.89 29.782 474.15 812.35 583.14 482.37 320.01 28 456 791 574 494 306 1 4 5 4 5 3 168430 13768 978;2097 13270 32007;32008;32009;32010;32011;32012 37213;37214;37215;37216;37217;37218 37215 6 LTFDSSFSPNTGKK Unmodified 1527.7569 0.75692277 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 1 10.3 1.97 1 2 1 2 60.101 60.101 3;4 1.8029E-07 16088 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.21 83.672 1115.5 427.34 969.47 1083.3 288.67 758.09 1047 455 963 1049 297 713 6 4 5 6 3 4 237120 13769 978;2097 13271 32013;32014;32015;32016;32017;32018 37219;37220;37221;37222;37223;37224 37222 6 LTFDTTFSPNTGK Unmodified 1427.6933 0.69325988 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 10 2.31 1 1 1 1 2 69.585 69.585 2;3 1.6208E-10 23139 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.09 88.914 444.13 192.25 471.65 57.48 429.34 152.66 417 195 451 56 418 148 3 3 4 1 4 2 78070 13770 2096 13272 32019;32020;32021;32022;32023;32024 37225;37226;37227;37228;37229;37230 37226 6 LTFDTTFSPNTGKK Unmodified 1555.7882 0.7882229 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 1 10.7 1.7 1 1 1 62.399 62.399 3;4 4.8146E-05 19139 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.262 55.799 649.5 115.84 566.91 591.65 335.64 432.81 609 120 553 578 354 415 3 1 2 3 2 2 56303 13771 2096 13273 32025;32026;32027 37231;37232;37233 37231 3 LTFFNSTLNTSGLVAQGEALPIPGAHRPGLVTK Unmodified 3405.8409 0.84087417 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 1 12 0 1 81.92 81.92 5 8.5396E-07 22604 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.2 44.77 67.419 0 47.46 47.449 0 0 65 0 46 46 0 0 2 0 1 1 0 0 6673.3 13772 2633 13274 32028 37234;37235 37235 2 LTFLNSFK Unmodified 968.53312 0.53311783 1151 K3W4T3;Q9Z1G4;P15920 Atp6v0a1;Atp6v0a2 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1;V-type proton ATPase 116 kDa subunit a isoform 2 yes no 0 0 0 0 6.5 5.5 1 1 77.882 77.882 2 0.0035846 20922 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.44 77.669 108.89 200.53 167.66 98.93 136.33 274.34 102 198 164 102 139 261 1 3 2 2 2 3 50345 13773 1151 13275 32029;32030 37236;37237;37238 37238 3 LTFLVAQK Unmodified 918.55385 0.55385327 2066 Q5SWU9;V9GXY1 Acaca Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 0 12 0 1 71.492 71.492 2 0.011271 18337 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.114 54.016 0 0 0 71.045 0 78.884 0 0 0 65 0 74 0 0 0 1 0 1 5042.2 13774 2066 13276 32031 37239 37239 1 LTFLYLANDVIQNSK Unmodified 1737.9301 0.93013611 201 A0A0R4J195;Q8VDS4;Q9CSU0 Rprd1a;Rprd1b Regulation of nuclear pre-mRNA domain-containing protein 1A;Regulation of nuclear pre-mRNA domain-containing protein 1B yes no 0 0 0 0 12 0 1 96.998 96.998 3 6.8484E-06 27748 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.19 88.528 0 0 24.513 8.376 0 0 0 0 23 9 0 0 0 0 1 1 0 0 2422.9 13775 201 13277 32032 37240 37240 1 LTFPGGLLIGCSPGFMNVPK Unmodified 2104.0849 0.084938963 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 4.67 5.19 2 1 95.188 95.188 3;4 1.4458E-08 33463 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.239 65.481 32.948 24.911 31.799 26.13 20.903 30.318 31 26 32 26 21 29 3 3 3 3 2 3 6471.8 13776 2244 13278 32033;32034;32035 37241;37242;37243 37242 3 LTFPLPCVVLYATHQENK Unmodified 2129.0979 0.097946491 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 0 11 0 1 83.886 83.886 3 1.8436E-21 26199 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.507 70.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13777 2612 13279 32036 37244 37244 1 LTFPLPCVVLYATHQENKR Unmodified 2285.1991 0.19905752 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 1 12 0 1 76.569 76.569 4 4.871E-09 20459 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.29 88.918 0 48.944 0 38.645 95.503 0 0 46 0 37 93 0 0 1 0 1 1 0 8806 13778 2612 13280 32037 37245 37245 1 LTFSCLGGSDNFK Unmodified 1444.6657 0.66566492 3304 Q9R0Q7;D3Z7C6 Ptges3 Prostaglandin E synthase 3 yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 71.57 71.57 2;3 2.9659E-24 24060 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 168.83 129.82 227.75 89.598 125.45 107.45 94.332 85.786 213 92 121 102 93 83 3 2 2 2 1 1 53671 13779 3304 13281 32038;32039;32040;32041;32042 37246;37247;37248;37249;37250 37246 5 LTFSPFQVR Unmodified 1093.592 0.59202969 862 E9PZ88;F8WIE1;Q91W89 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 0 11 0 1 71.959 71.959 2 0.0033236 20977 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.064 48.195 0 78.736 0 151.93 0 0 0 74 0 139 0 0 0 1 0 1 0 0 14950 13780 862 13282 32043 37251 37251 1 LTFVDFLTYDVLDQNR Unmodified 1957.9785 0.97854286 1584 P48774;E9PVM7;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 104.7 104.7 3 1.6384E-51 36854 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 185.67 172.57 91.092 37.077 68.53 63.552 10.906 5.1382 87 36 67 61 11 5 7 4 5 3 2 1 47406 13781 1584 13283 32044;32045;32046;32047;32048 37252;37253;37254;37255;37256;37257;37258;37259;37260;37261 37255 10 LTFYALSAPEK Unmodified 1238.6547 0.65468953 2263 Q6ZQ18 Efr3b Protein EFR3 homolog B yes yes 0 0 0 0 10 0 1 73.712 73.712 3 0.024089 22274 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.809 14.411 0 58.36 73.22 75.127 73.953 0 0 56 74 74 74 0 0 1 1 1 1 0 5942.4 13782 2263 13284 32049 37262 37262 1 LTGADGTPPGFLLK Unmodified 1385.7555 0.7554662 2957 Q9CR62;Q5SX46 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 10.8 2.28 1 1 2 74.972 74.972 2;3 0.0003193 25743 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.015 48.817 187.88 79.404 95.305 84.741 73.965 77.839 176 83 93 84 74 75 4 2 1 2 1 2 18094 13783 2957 13285 32050;32051;32052;32053 37263;37264;37265;37266 37263 4 LTGFHETSNINDFSAGVANR Unmodified 2149.0188 0.018844547 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 7.4 1.02 1 2 1 1 59.705 59.705 3;4 1.0208E-29 19963 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.61 113.31 128.91 92.553 77.093 137.46 155.94 115.55 121 94 74 130 158 111 4 3 2 3 3 2 45220 13784 1383 13286 32054;32055;32056;32057;32058 37267;37268;37269;37270;37271 37267 5 LTGGANWQPK Unmodified 1070.5509 0.55089316 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 11 2 1 1 55.067 55.067 2;3 2.8803E-11 15523 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.32 119.55 0 0 0 87.787 155.9 155.45 0 0 0 83 158 150 0 0 0 1 1 1 15351 13785 2129 13287 32059;32060 37272;37273 37272 2 LTGGANWQPK Deamidation (N) 1071.5349 0.53490874 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 1 0 0 13 0 1 54.472 54.472 2 0.00010267 18488 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.034 54.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13786 2129 13287 32061 37274 37274 828 1 LTGISDPVTVK Unmodified 1128.639 0.63903946 1287 Q8R357;O88998;A3KGE4;G3X9Q7 Olfm1 Noelin yes no 0 0 0 0 8 0 1 63.524 63.524 2 7.4208E-08 20255 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.57 77.217 69.289 24.18 56.214 57.858 0 0 65 28 56 56 0 0 1 1 1 1 0 0 6746.9 13787 1287 13288 32062 37275 37275 1 LTGLTSSIPDMILGHLFSQEELSGNSELIQK Unmodified 3356.7174 0.71737272 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BPW0 Ndrg2 Protein NDRG2 no no 0 0 0 0 10 1 1 1 101.81 101.81 4 2.2059E-13 33696 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.459 56.354 0 17.958 7.7843 8.2801 32.992 23.577 0 17 8 8 32 23 0 2 1 1 1 2 8585.8 13788 3277;377 13289 32063;32064 37276;37277 37277 2 LTGMAFR Unmodified 794.41089 0.4108942 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;A0A0R4J0X7;S4R2G5;Q64467;S4R1W1 Gapdh;Gapdhs;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific no no 0 0 0 0 10.7 1.7 1 1 1 55.895 55.895 2 0.0056315 14278 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.89 103.04 6187.4 4632 7539.2 5549.1 6914.4 7095.2 5830 4864 7482 5607 7087 6841 3 3 3 3 3 3 1579000 13789 1395;3448 13290 32065;32066;32067 37278;37279;37280 37279 3 LTGMPDLTLSFMNPR Unmodified 1691.8375 0.83749805 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 0 10 0 1 88.568 88.568 3 0.0057065 28535 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.69 24.868 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2006.6 13790 2650 13291 32068 37281 37281 1 LTGPFFTFSSSFPANSDFSSSSFSFSPGAGAFR Unmodified 3440.5626 0.56258664 3278 Q9QYI5 Dnajb2 DnaJ homolog subfamily B member 2 yes yes 0 0 0 0 11 0 2 101.73 101.73 3;4 0.022168 33672 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 13.36 7.133 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1372.3 13791 3278 13292 32069;32070 37282;37283 37283 2 LTGSLSGWTSPK Unmodified 1232.6401 0.6401021 2843 Q99KI0;A0A2R8W744 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 66.835 66.835 3 4.4608E-15 18994 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.1 92.355 1152.7 901.53 804.9 814.2 882.43 780.28 1083 933 809 804 905 750 2 2 1 2 2 1 251840 13792 2843 13293 32071;32072 37284;37285 37285 2 LTGSTSSLNK Unmodified 1006.5295 0.52948901 2213 Q6P1Y9;Q5PPR2;Q8R3S6 Exoc1 Exocyst complex component 1 yes no 0 0 0 0 8 0 1 47.366 47.366 3 0.001781 12678 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.881 38.071 99.096 0 116.41 71.694 119.63 75.47 93 0 111 74 120 74 1 0 1 1 1 1 3662.1 13793 2213 13294 32073 37286 37286 1 LTGSVLEDTWK Unmodified 1247.6398 0.63976774 770 D3Z3J6;G3UYE5;F6Y616;Q8VE62 Paip1 Polyadenylate-binding protein-interacting protein 1 yes no 0 0 0 0 7 0 1 72.162 72.162 3 0.00054955 24951 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.843 50.137 39.529 0 28.841 28.18 37.465 28.779 37 0 28 28 38 28 1 0 1 1 1 1 3535.7 13794 770 13295 32074 37287 37287 1 LTGVFAPR Unmodified 859.49159 0.49158736 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 10.5 0.5 1 1 58.649 58.649 2 0.011135 14970 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.662 53.16 118.45 130.33 100.63 109.31 218.91 241.07 111 130 93 102 222 232 1 1 1 1 2 2 49520 13795 1730 13296 32075;32076 37288;37289 37289 2 LTGVSISQVNHNKPLR Unmodified 1761.985 0.98496564 1170 O08917;G3UYU4 Flot1 Flotillin-1 yes no 0 0 0 1 10 0 1 48.9 48.9 4 6.3233E-06 11278 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.03 91.616 59.447 0 107.72 52.686 111.75 56.507 56 0 102 56 111 56 1 0 1 1 1 1 8967.9 13796 1170 13297 32077 37290 37290 1 LTIAEER Unmodified 830.44978 0.44978213 1730 P62702;V9GWY0 Rps4x;Gm15013 40S ribosomal protein S4, X isoform;40S ribosomal protein S4 yes no 0 0 0 0 5 0 1 46.072 46.072 2 0.061033 14027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.616 10.958 68.909 93.279 61.429 66.383 53.199 67.772 65 93 65 65 56 65 1 1 1 1 1 1 12096 13797 1730 13298 32078 37291 37291 1 LTIAFQAK Unmodified 890.52255 0.52255314 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 10 0 1 66.066 66.066 2 0.010052 18675 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.629 49.211 118.79 61.15 0 108.89 137.82 74.951 111 65 0 102 139 74 1 1 0 1 1 1 4555.2 13798 2566 13299 32079 37292 37292 1 LTIIGEEDLPPGEVDQELIEDGQWEEILK Unmodified 3306.6395 0.63949956 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 13 0 1 100.9 100.9 4 0.00090157 40777 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 37.637 19.99 0 20.216 0 0 19.197 47.706 0 19 0 0 19 47 0 1 0 0 1 2 2599.3 13799 255;3362 13300 32080 37293;37294 37293 2 LTILNDR Unmodified 843.48142 0.48141661 513 A2AS98;P28660;A0A2R8VHC4;Q8K1X4 Nckap1;Nckap1l Nck-associated protein 1 yes no 0 0 0 0 8 0 1 56.649 56.649 2 0.032395 17060 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.368 7.2965 118.21 0 149.8 0 145.39 0 111 0 139 0 139 0 1 0 1 0 1 0 14660 13800 513 13301 32081 37295 37295 1 LTILYTK Unmodified 850.51641 0.51640513 2892 Q9CPP6 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 0 0 0 0 8.75 4.49 1 2 1 68.138 68.138 2;3 0.0052912 19086 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.55 65.993 1113.6 762.58 745.83 1016.8 766.53 607.62 1045 793 739 974 754 570 4 3 3 2 3 2 359510 13801 2892 13302 32082;32083;32084;32085 37296;37297;37298;37299;37300 37297 5 LTIQGLK Unmodified 771.48544 0.48543935 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 10 0.816 1 1 1 61.845 61.845 2;3 0.0062161 16881 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.78 36.392 3150.1 3249.4 3652.8 2108.6 3236.9 3865.7 2964 3311 3644 2142 3291 3713 1 3 2 1 2 3 402400 13802 2843 13303 32086;32087;32088 37301;37302;37303 37302 3 LTISAPLPR Unmodified 966.58622 0.58621603 960 E9QLL2;Q8BZ98;F2Z460;E0CXZ8 Dnm3 Dynamin-3 yes no 0 0 0 0 9 0 1 61.464 61.464 2 8.8938E-14 18587 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.52 113.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13803 960 13304 32089 37304 37304 1 LTIVGDGK Unmodified 801.45962 0.45961853 1104 G5E8H1 Gria2 no no 0 0 0 0 8 0 1 57.359 57.359 3 0.025932 17113 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.059 15.179 39.2 56.331 36.457 0 29.288 0 37 56 37 0 28 0 1 1 1 0 1 0 21182 13804 1104 13305 32090 37305 37305 1 LTIVSTVGFGDQINK Unmodified 1590.8617 0.86172219 3317 Q9R1T4;A2A3W1 Sept6 Septin-6 yes no 0 0 0 0 11.5 0.5 1 1 77.09 77.09 3 0.00063059 23194 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.861 44.92 48.897 25.562 55.795 67.72 0 0 46 28 56 65 0 0 1 1 1 1 0 0 5097.3 13805 3317 13306 32091;32092 37306;37307 37306 2 LTIYNANIEDAGIYR Unmodified 1724.8733 0.87334951 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 8 0 1 71.727 71.727 3 0.00057706 24157 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.641 32.286 39.701 0 0 0 0 49.036 37 0 0 0 0 46 1 0 0 0 0 1 3678 13806 1180 13307 32093 37308 37308 1 LTLADIER Unmodified 929.5182 0.51819605 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 8.67 3.09 1 1 1 62.644 62.644 2 0.0044383 21457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.06 21.111 364.56 245.76 376.78 399.59 166.53 251.09 343 260 380 389 185 240 3 3 3 3 3 3 59754 13807 2396 13308 32094;32095;32096 37309;37310;37311 37309 3 LTLAELNQVLYR Unmodified 1431.8086 0.80856441 1028 F8VPN4;A0A0G2JGI9;F6XXE6 Agl yes no 0 0 0 0 10 0 1 82.486 82.486 3 0.0086972 26155 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.448 23.51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13808 1028 13309 32097 37312 37312 1 LTLAFSAQTK Unmodified 1078.6023 0.60226003 737 F6XC54;D3Z074;E9PXV7;E9PV41;O08808 Diap1;Diaph1 Protein diaphanous homolog 1 yes no 0 0 0 0 11 0 1 66.743 66.743 2 0.0097353 18559 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.92 36.35 0 0 37.895 48.019 0 0 0 0 37 46 0 0 0 0 1 1 0 0 2997.1 13809 737 13310 32098 37313 37313 1 LTLAGAR Unmodified 700.42317 0.42317345 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 9.5 0.5 1 1 45.892 45.892 2 0.0065262 10086 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.3 17.456 567.27 174.22 451.58 445.39 283.63 617.65 532 178 448 437 311 587 2 1 2 2 2 2 76896 13810 144 13311 32099;32100 37314;37315 37315 2 LTLDKLDVK Unmodified 1043.6227 0.62266112 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 10.3 2.05 1 1 1 63.466 63.466 3 0.010902 22652 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.153 11.586 1639.4 1527.2 2338 2036.2 1773.6 1978 1548 1576 2337 2021 1850 1903 3 3 3 3 3 3 216880 13811 1334 13312 32101;32102;32103 37316;37317;37318 37318 3 LTLDTIFVPNTGK Unmodified 1417.7817 0.78168095 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 10.8 1.67 2 1 1 2 81.166 81.166 2;3 1.304E-20 27933 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 153.11 103.69 575.16 238.26 333.46 643.57 232.7 430.34 539 250 334 611 241 408 6 4 5 7 3 5 178090 13812 1141 13313 32104;32105;32106;32107;32108;32109 37319;37320;37321;37322;37323;37324;37325 37321 7 LTLDTIFVPNTGKK Unmodified 1545.8766 0.87664397 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 1 10 0.894 2 1 2 72.349 72.349 3;4 8.3537E-05 21123 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.457 64.143 991.03 797.89 1254.8 1271.8 581.07 777.24 931 828 1255 1241 633 737 4 4 3 3 4 3 121560 13813 1141 13314 32110;32111;32112;32113;32114 37326;37327;37328;37329;37330;37331;37332 37332 7 LTLEDSGTYECR Unmodified 1442.6348 0.63475872 1841 P97300 Nptn Neuroplastin yes yes 0 0 0 0 4.5 0.5 1 1 54.418 54.418 2;3 4.0878E-40 18037 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 195.83 176.73 49.073 0 47.85 37.589 0 59.696 46 0 46 37 0 56 1 0 1 1 0 1 22147 13814 1841 13315 32115;32116 37333;37334 37334 2 LTLEQGQQLVAEGHPGANQASTR Unmodified 2404.2095 0.20949886 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6 0.816 1 1 1 55.797 55.797 3;4 0.00017258 18772 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.591 29.285 79.624 161.8 56.44 39.196 134.18 20.254 75 158 56 37 130 19 2 3 1 1 2 1 19920 13815 2186 13316 32117;32118;32119 37335;37336;37337 37335 3 LTLFVNGQPRPLESSQVK Unmodified 2012.1055 0.10547471 3372 Q9Z1A1;B8JJG7;B8JJG8;B8JJG6;F6QJV5 Tfg yes no 0 0 0 1 9 0 1 69.389 69.389 4 0.010226 22261 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.52 19.286 59.809 0 46.868 58.415 0 59.696 56 0 46 56 0 56 1 0 1 1 0 1 8394 13816 3372 13317 32120 37338 37338 1 LTLHGLQQYYVK Unmodified 1461.798 0.79799972 3379 Q9Z1N5;Q8VDW0 Ddx39b;Ddx39a Spliceosome RNA helicase Ddx39b;ATP-dependent RNA helicase DDX39A yes no 0 0 0 0 11.2 0.433 3 1 63.79 63.79 2;3;4 5.1332E-14 17218 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.56 98.179 158.16 212.87 61.976 66.097 66.677 111.09 148 214 60 65 69 106 1 3 1 1 1 2 52609 13817 3379 13318 32121;32122;32123;32124 37339;37340;37341;37342 37339 4 LTLIDPETLLPR Unmodified 1379.8024 0.8024164 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9.8 1.72 1 2 1 1 89.357 89.357 2;3 2.6471E-20 31546 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 156.48 98.772 95.002 60.208 57.418 84.144 28.601 49.853 89 60 56 79 28 47 3 2 2 3 2 2 25623 13818 2264 13319 32125;32126;32127;32128;32129 37343;37344;37345;37346;37347;37348 37346 6 LTLLNNPLSIIPDYR Unmodified 1740.9774 0.97742065 2305 Q80TM9;F6ZL69 Nisch Nischarin yes no 0 0 0 0 12 0 1 93.441 93.441 3 1.2207E-05 26836 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.191 62.652 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 8658.6 13819 2305 13320 32130 37349 37349 1 LTLLQLK Unmodified 827.54804 0.54803961 1914 Q3TCN2 Plbd2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 28 kDa form;Putative phospholipase B-like 2 40 kDa form;Putative phospholipase B-like 2 15 kDa form yes yes 0 0 0 0 6.5 5.5 1 1 74.796 74.796 2 0.011796 19656 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.21 0 311.66 54.248 232.53 224.03 369.37 275.15 292 56 224 224 372 268 2 1 1 2 2 2 26039 13820 1914 13321 32131;32132 37350;37351 37351 2 LTLLSNQWQGVIR Unmodified 1526.8569 0.85691158 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 1 0 1 80.475 80.475 3 0.0037417 28007 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.211 19.983 20.387 0 0 0 0 29.848 19 0 0 0 0 28 1 0 0 0 0 1 1608.1 13821 305 13322 32133 37352 37352 1 LTLPEYLPPHAVIYIDVPVPEVQSR Unmodified 2844.5426 0.54256689 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 88.844 88.844 3;4 1.5615E-05 31327 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.258 36.361 0 9 0 30.604 0 9.594 0 9 0 28 0 9 0 1 0 1 0 1 3615.4 13822 2859 13323 32134;32135;32136 37353;37354;37355 37355 3 LTLPFLLLQGSADR Unmodified 1542.877 0.87697832 725 E9Q3B9;D3YYS6;O35678 Mgll Monoglyceride lipase yes no 0 0 0 0 4.67 5.19 2 1 95.736 95.736 2;3 3.6958E-16 33587 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 128.1 93.209 25.585 12.324 45.157 24.357 37.657 58.086 24 13 43 23 37 56 2 2 4 2 3 6 33928 13823 725 13324 32137;32138;32139 37356;37357;37358;37359;37360;37361;37362 37359 7 LTLQEFQEGSK Unmodified 1278.6456 0.6455814 2439 Q8BNY6 Ncs1 Neuronal calcium sensor 1 yes yes 0 0 0 0 8 2 1 1 65.074 65.074 2 0.014296 22425 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.781 27.287 0 39.368 0 0 0 29.848 0 37 0 0 0 28 0 1 0 0 0 1 2170.9 13824 2439 13325 32140;32141 37363;37364 37363 2 LTLQTTSDGVMLDKDLFK Unmodified 2024.05 0.049993245 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1 8 0 1 79.257 79.257 4 2.6354E-07 27714 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.244 44.216 59.76 65.13 0 69.876 62.132 77.111 56 65 0 65 65 74 1 1 0 1 1 1 4427.6 13825 789 13326 32142 37365 37365 1 LTLSALLDGK Unmodified 1029.607 0.60701105 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 0 9.6 3.1 1 2 3 2 1 1 81.356 81.356 2;3 1.2132E-28 25102 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 193.82 0 2331.1 1273.1 2057 951.72 1135.9 1370.9 2187 1359 2010 926 1159 1311 13 13 11 8 11 11 541220 13826 2097 13327 32143;32144;32145;32146;32147;32148;32149;32150;32151;32152 37366;37367;37368;37369;37370;37371;37372;37373;37374;37375;37376;37377;37378;37379;37380 37371 15 LTLSALVDGK Unmodified 1015.5914 0.59136099 2096 Q60930;G3UX26 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 10.2 1.56 1 2 2 1 1 1 75.507 75.507 2;3 1.7899E-08 25301 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 147.4 100.98 443.98 346.95 453.35 616.11 266.8 497.12 416 352 445 593 278 472 4 6 3 6 3 5 322480 13827 2096 13328 32153;32154;32155;32156;32157;32158;32159;32160 37381;37382;37383;37384;37385;37386;37387;37388 37383 8 LTLSDFLIKPIQR Unmodified 1542.9134 0.91336383 545 F6QYT9;A2CG49;D3Z534;D3Z532;D3Z535;D3Z4R2 Kalrn Kalirin yes no 0 0 0 1 12 0 1 81.046 81.046 3 0.00040843 22252 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.927 50.178 0 59.584 0 0 58.576 0 0 56 0 0 56 0 0 1 0 0 1 0 6530 13828 545 13329 32161 37389 37389 1 LTLTFNR Unmodified 863.4865 0.48650199 484;2493 A2AKU9;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 10.5 0.5 1 1 60.506 60.506 2 0.012751 16317 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.18 76.325 957.67 775.22 873.19 814.56 1228.4 1335.8 901 803 888 814 1254 1286 1 1 1 1 1 1 332190 13829 484;2493 13330 32162;32163 37390;37391 37390 2 LTLVCSTAPGPLELDLTGDLESFK Unmodified 2575.3091 0.30912106 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 8 0 2 99.271 99.271 3;4 5.6146E-13 35451 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.272 48.12 0 12.768 0 6.558 0 24.518 0 12 0 6 0 23 0 1 0 1 0 2 4426 13830 2889 13331 32164;32165 37392;37393 37393 2 LTLVCSTAPGPLELDLTGDLESFKK Unmodified 2703.4041 0.40408408 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 1 8 0.707 1 2 1 91.792 91.792 3;4 2.1346E-29 33274 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.73 111.14 40.557 58.216 20.456 129.3 98.727 98.425 38 56 19 120 102 93 2 2 1 2 2 2 34659 13831 2889 13332 32166;32167;32168;32169 37394;37395;37396;37397;37398 37395 5 LTLYDIAHTPGVAADLSHIETR Unmodified 2392.2387 0.23867373 1327 P08249;A0A0G2JF23;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 8.11 2.42 1 2 1 2 1 1 1 73.76 73.76 3;4 1.3688E-67 25953 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 169.77 150.47 845.49 719.39 761.27 500.07 696.87 817.1 794 738 756 491 696 786 13 13 11 9 8 10 868290 13832 1327 13333 32170;32171;32172;32173;32174;32175;32176;32177;32178 37399;37400;37401;37402;37403;37404;37405;37406;37407;37408;37409;37410;37411;37412;37413;37414 37405 16 LTMLNTVSK Unmodified 1005.5529 0.55286699 2155 Q62419 Sh3gl1 Endophilin-A2 yes yes 0 0 0 0 10.5 0.5 1 1 63.891 63.891 2 0.0059016 17229 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.008 9.7649 60.088 58.63 57.074 0 145.39 0 56 56 56 0 139 0 1 1 1 0 1 0 20016 13833 2155 13334 32179;32180 37415;37416 37416 2 LTNENLDLMEQLEK Unmodified 1688.8291 0.82910143 728 D3YZ62;D3Z4J3;F6TDE5;F6Z2S4 Myo5a yes no 0 0 0 0 6 0 1 78.419 78.419 3 0.0014432 28710 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.755 28.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13834 728 13335 32181 37417 37417 1 LTNGIWILAELR Deamidation (N) 1398.7871 0.78710068 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 1 0 0 9 0 1 97.616 97.616 2 0.041386 35004 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.234 18.827 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 12153 13835 3123 13336 32182 37418 37418 1092 1 LTNGIWILAELR Unmodified 1397.8031 0.8030851 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 11 0 1 92.76 92.76 3 0.0049195 29765 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.135 44.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1939.6 13836 3123 13336 32183 37419 37419 1 LTNGIWVLAELR Deamidation (N) 1384.7715 0.77145062 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 1 0 0 9 0 1 94.343 94.343 2 0.016028 33676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.082 39.994 0 14.82 4.5208 0 0 14.924 0 14 5 0 0 14 0 1 1 0 0 1 3354.6 13837 1203 13337 32184 37420 37420 325 1 LTNGIWVLAELR Unmodified 1383.7874 0.78743503 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 10 0 1 89.478 89.478 2 0.0070225 28976 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.155 30.459 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1961.4 13838 1203 13337 32185 37421 37421 1 LTNVATSVSNK Unmodified 1132.6088 0.60880197 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 8.5 0.5 1 1 53.058 53.058 2 4.8641E-08 14545 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.12 61.577 59.528 87.53 124.91 107.49 107.14 124.86 56 88 125 107 107 120 1 2 2 2 1 2 16629 13839 1201 13338 32186;32187 37422;37423 37423 2 LTPAQWFLR Unmodified 1130.6237 0.62366417 1156 O08530 S1pr1 Sphingosine 1-phosphate receptor 1 yes yes 0 0 0 0 12 0 1 78.404 78.404 2 0.0027934 21148 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.429 50.362 36.28 40.114 0 0 51.254 0 34 40 0 0 49 0 1 1 0 0 1 0 12838 13840 1156 13339 32188 37424 37424 1 LTPEEEEILNK Unmodified 1313.6715 0.6714618 1714 P62242 Rps8 40S ribosomal protein S8 yes yes 0 0 0 0 7.33 4.03 1 1 1 67.452 67.452 2 8.9646E-08 24250 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.4 71.318 39.352 0 58.641 39.35 26.151 38.696 37 0 56 38 28 37 2 0 2 1 1 1 7438 13841 1714 13340 32189;32190;32191 37425;37426;37427 37425 3 LTPEEIER Unmodified 985.50803 0.50802529 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 3.5 0.5 1 1 49.262 49.262 2 0.0097414 15945 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.442 37.242 0 0 235.08 115 284.99 76.065 0 0 222 111 280 74 0 0 2 1 2 1 48197 13842 1419 13341 32192;32193 37428;37429 37429 2 LTPEFSHR Unmodified 985.49813 0.49812931 1292 O89112;B2KGR2 Lancl1 LanC-like protein 1 yes no 0 0 0 0 6.5 0.5 1 1 41.233 41.233 3 0.0022323 10420 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.815 52.007 29.566 26.835 57.623 27.17 0 0 28 28 56 28 0 0 1 1 1 1 0 0 9335.8 13843 1292 13342 32194;32195 37430;37431 37431 2 LTPFILGALIAMYEHK Unmodified 1815.9957 0.99571325 1316 P06745;CON__Q3ZBD7;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 13 0 1 106.52 106.52 3 0.0011588 43517 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.147 38.52 0 0 9.738 0 0 29.848 0 0 9 0 0 28 0 0 1 0 0 1 1699.4 13844 1316 13343 32196 37432 37432 1 LTPITIFMEYR Unmodified 1382.7268 0.72680861 1547 P43406;A2AKI5 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes no 0 0 0 0 11 0 1 88.94 88.94 2 0.027978 28463 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.872 26.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13845 1547 13344 32197 37433 37433 1 LTPITYPQGLAMAK Unmodified 1502.8167 0.81668625 1759 Q3TLP8;P63001 Rac1 Ras-related C3 botulinum toxin substrate 1 yes no 0 0 0 0 10.5 1.12 1 1 1 1 74.199 74.199 2;3 2.2998E-07 22453 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.86 78.529 49.176 105.21 0 168.8 196.05 67.945 46 102 0 157 194 65 1 2 0 2 2 2 42248 13846 1759 13345 32198;32199;32200;32201 37434;37435;37436;37437 37435 4 LTPQAVK Unmodified 755.45414 0.45413923 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 9 0 1 47.797 47.797 2 0.012613 12087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.323 26.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13847 2269 13346 32202 37438 37438 1 LTPQGQR Unmodified 798.4348 0.43480077 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722 Rps19 40S ribosomal protein S19 yes no 0 0 0 0 8 0 1 30.628 30.628 2 0.030497 5297 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.602 46.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13848 3013 13347 32203 37439 37439 1 LTPSKPQNCAR Unmodified 1270.6452 0.64520425 25 A0A087WQF0 Lppr2 yes yes 0 0 0 1 9 0 1 36.388 36.388 3 0.0044756 7346 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.815 33.191 29.431 51.283 59.613 46.725 0 44.772 28 51 60 46 0 42 1 1 1 1 0 1 4866.3 13849 25 13348 32204 37440 37440 1 LTPTEVR Unmodified 814.45487 0.45486751 1589 P49722;Q8BKE0 Psma2 Proteasome subunit alpha type-2 yes no 0 0 0 0 5 0 1 41.68 41.68 2 0.061243 11962 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.67 27.896 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13850 1589 13349 32205 37441 37441 1 LTPVDYLLGVADLTGELMR Unmodified 2075.0973 0.097277789 3292 Q9QZE7 Tsnax Translin-associated protein X yes yes 0 0 0 0 9.5 0.5 1 1 117.34 117.34 3 0.0093671 39018 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.85 13.659 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 1810 13851 3292 13350 32206;32207 37442;37443 37442 2 LTPVVLAK Unmodified 839.54804 0.54803961 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 11.2 1.17 2 1 1 1 64.559 64.559 2;3 0.0057763 17953 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.82 74.795 1061.3 658.07 925.39 617.3 1136.9 303.1 997 690 915 612 1124 295 5 5 5 5 6 2 128850 13852 2844 13351 32208;32209;32210;32211;32212 37444;37445;37446;37447;37448;37449;37450 37444 7 LTQAAIVK Unmodified 842.52255 0.52255314 2174 Q64378 Fkbp5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 0 9 0 1 54.186 54.186 2 0.013394 15118 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.308 30.204 0 77.376 81.338 85.871 0 78.884 0 74 83 83 0 74 0 1 1 1 0 1 2867.9 13853 2174 13352 32213 37451 37451 1 LTQDAVAK Unmodified 844.46543 0.46543219 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 6.5 0.5 1 1 46.98 46.98 2 0.025334 13073 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.614 23.765 69.107 0 107.2 63.292 72.518 57.627 65 0 102 65 74 56 1 0 1 1 1 1 4101.8 13854 2924 13353 32214;32215 37452;37453 37453 2 LTQDQDVDVK Unmodified 1159.5721 0.57208211 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 5.67 3.45 2 1 1 1 1 50.529 50.529 2;3 2.1504E-15 16318 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 175.15 97.476 295.65 459.9 256.04 119.34 344.55 483.73 278 455 250 112 344 463 3 6 3 3 4 5 74122 13855 2272 13354 32216;32217;32218;32219;32220;32221 37454;37455;37456;37457;37458;37459;37460 37460 7 LTQEPESIR Unmodified 1071.556 0.55603811 2197 Q6IRU5;F7BHJ0 Cltb Clathrin light chain B yes no 0 0 0 0 7 3.54 1 1 1 1 44.44 44.44 2;3 3.5471E-05 13333 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.63 88.64 257.22 58.505 333.71 294.89 232.79 413.36 241 56 325 292 239 394 2 1 4 4 2 4 63648 13856 2197 13355 32222;32223;32224;32225 37461;37462;37463;37464 37462 4 LTQGEVYK Unmodified 936.49165 0.49164694 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 2 49.93 49.93 2;3 0.0058116 15338 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.547 42.738 79.126 28.68 112.88 114.6 0 118.33 74 28 111 111 0 111 1 1 2 2 0 2 8218.8 13857 1412 13356 32226;32227 37465;37466 37466 2 LTQIMLLK Unmodified 958.58852 0.58852422 2263 Q6ZQ18;A0A1W2P7T9 Efr3b Protein EFR3 homolog B yes no 0 0 0 0 9 4.64 1 1 2 77.786 77.786 2 0.0082601 20921 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.21 26.209 173.52 103.8 143.44 125 182.88 251.69 163 107 144 125 186 241 2 1 1 1 2 3 12448 13858 2263 13357 32228;32229;32230;32231 37467;37468;37469;37470 37470 4 LTQKEEIPEEELNEDVEEIDHAER Unmodified 2893.3465 0.34650543 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 1 6.25 3.96 1 1 1 1 68.379 68.379 4 3.3689E-19 25529 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.15 102.63 238.31 146.52 38.84 151.22 46.055 257.72 223 149 37 139 46 242 6 4 1 3 2 5 45405 13859 1042 13358 32232;32233;32234;32235 37471;37472;37473;37474;37475;37476 37472 6 LTQYIDGQGR Unmodified 1149.5778 0.57783619 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YCH4 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 7 0 1 55.258 55.258 2 0.04517 16903 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.028 26.856 107.97 98.498 164.5 0 121.91 105.25 102 102 158 0 120 102 1 1 1 0 1 1 23423 13860 1475;2818 13359 32236 37477 37477 1 LTQYIDGQGRPR Unmodified 1402.7317 0.73171107 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YCH4 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 1 7.5 0.5 1 1 48.315 48.315 3 9.8156E-15 13714 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.6 90.78 265.82 333.91 525.18 361.21 435.05 646.37 250 330 520 357 453 618 2 2 3 2 3 3 130850 13861 1475;2818 13360 32237;32238 37478;37479;37480 37478 3 LTSAINELNHCLSLR Unmodified 1739.8989 0.89885275 2536 Q8CGC7;A0A0A6YWH3;A0A0A6YWA4 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes no 0 0 0 0 8 0 1 72.063 72.063 3 0.010241 24273 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.482 22.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13862 2536 13361 32239 37481 37481 1 LTSAVPGADIK Unmodified 1070.5972 0.59717465 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 7 0 1 59.715 59.715 3 0.0010061 19143 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.56 41.123 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13863 281 13362 32240 37482 37482 1 LTSDYLR Unmodified 866.44978 0.44978213 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 52.15 52.15 2 0.026678 15488 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.139 17.758 246.84 286.9 109.36 245.09 104.56 293.36 232 287 111 232 111 278 2 2 1 2 1 2 39496 13864 3258 13363 32241;32242 37483;37484 37484 2 LTSEDSDLR Unmodified 1034.488 0.48801813 358 E9PWG2;A0A286YCX6;E9PY51 Trappc8 yes no 0 0 0 0 3 0 1 43.396 43.396 2 0.050221 13547 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.908 16.286 39.564 27.124 0 0 0 39.442 37 28 0 0 0 37 1 1 0 0 0 1 3264.2 13865 358 13364 32243 37485 37485 1 LTSEEFNAIFTFYDK Unmodified 1823.8618 0.86178177 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 10 2.16 1 1 1 93.48 93.48 3 0.0010424 37236 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.097 36.265 24.679 38.751 36.882 103.82 22.198 49.469 23 37 37 99 23 47 1 1 1 4 1 2 15203 13866 1892 13365 32244;32245;32246 37486;37487;37488;37489 37488 4 LTSEEVFDMDGIPR Unmodified 1607.7501 0.75012283 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 7.33 4.03 1 1 1 74.936 74.936 3 4.0631E-05 27616 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.527 71.803 49.01 104.61 36.53 109.31 0 19 46 102 37 102 0 19 1 2 1 2 0 1 16504 13867 811 13366 32247;32248;32249 37490;37491;37492 37490 3 LTSEPQPQR Unmodified 1054.5407 0.5407224 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 5 0 1 36.102 36.102 2 9.0814E-05 9267 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.15 55.378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13868 2729 13367 32250 37493 37493 1 LTSFITVFK Unmodified 1054.6063 0.60628277 3064 Q9D4H8;E0CYT5 Cul2 Cullin-2 yes no 0 0 0 0 6.5 5.5 1 1 86.466 86.466 2 3.1062E-05 30791 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.48 71.656 29.569 75.122 33.281 64.855 49.321 9.594 28 73 34 62 50 9 2 3 1 2 2 1 7691.9 13869 3064 13368 32251;32252 37494;37495;37496 37494 3 LTSLGVIGALVK Unmodified 1169.7384 0.73835958 3238 Q9JKY0 Rqcd1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 0 6.5 5.5 1 1 86.181 86.181 2;3 0.00079279 24154 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.017 39.828 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 2223.2 13870 3238 13369 32253;32254 37497;37498 37498 2 LTSLVPFVDAFQLER Unmodified 1733.9352 0.93522148 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 9.5 0.5 1 1 98.747 98.747 3 0.0052534 32273 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.567 21.449 30.044 0 14 40.441 0 59.696 28 0 14 37 0 56 1 0 1 1 0 1 9227.1 13871 1438 13370 32255;32256 37499;37500 37500 2 LTSNPLASHDYILK Unmodified 1570.8355 0.83550744 3135 Q9DC16 Ergic1 Endoplasmic reticulum-Golgi intermediate compartment protein 1 yes yes 0 0 0 0 8 0 1 64.769 64.769 3 2.6436E-05 20835 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.764 52.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13872 3135 13371 32257 37501 37501 1 LTSTVMLWLQTNK Unmodified 1533.8225 0.82249991 495;1565 A2AMW0;F7CAZ6;P47757 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 6.83 5.84 3 1 2 92.166 92.166 3 1.5459E-12 25666 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.02 77.143 15.991 22.879 29.907 27.619 85.554 62.998 15 22 29 27 85 60 2 2 3 3 4 4 14909 13873 495;1565 13372 32258;32259;32260;32261;32262;32263 37502;37503;37504;37505;37506;37507;37508;37509 37507 8 LTTDFNVIVQALSK Unmodified 1547.8559 0.85590853 509 P32067;A2AR07;D6RI87 Ssb Lupus La protein homolog yes no 0 0 0 0 11.5 1.12 1 1 1 1 96.769 96.769 2;3 0.00049291 31596 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.889 44.77 35.044 0 0 30.079 41.906 0 33 0 0 28 42 0 2 0 0 1 2 0 6418.8 13874 509 13373 32264;32265;32266;32267 37510;37511;37512;37513 37511 4 LTTFQALQHPWVTGK Unmodified 1725.9202 0.92024012 1328 Q8BGR3;P08414 Camk4 Calcium/calmodulin-dependent protein kinase type IV yes no 0 0 0 0 11.5 0.5 1 1 70.589 70.589 4 0.0010779 17956 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.823 34.411 20.195 103.01 0 0 0 39.442 19 102 0 0 0 37 1 2 0 0 0 1 16740 13875 1328 13374 32268;32269 37514;37515 37515 2 LTTLELLEVR Unmodified 1185.6969 0.69688869 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 79.039 79.039 2;3 5.3114E-06 30301 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.75 77.323 307.32 305.08 126.96 262.44 230.69 242.31 288 306 130 251 232 232 5 5 3 5 3 4 118280 13876 2148 13375 32270;32271;32272;32273 37516;37517;37518;37519;37520;37521 37521 6 LTTPATLTLPEIAASGLTR Unmodified 1925.0833 0.083342284 1916 Q3TDK6 Rogdi Protein rogdi homolog yes yes 0 0 0 0 11 2 1 1 84.541 84.541 3 3.6586E-07 29295 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.688 59.658 80.239 58.839 84.291 37.785 29.288 0 75 56 83 37 28 0 2 1 2 1 1 0 20582 13877 1916 13376 32274;32275 37522;37523;37524 37522 3 LTTPTYGDLNHLVSATMSGVTTCLR Unmodified 2707.3309 0.33093591 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 0 0 9.64 3.02 1 3 3 1 2 1 86.389 86.389 3;4 1.786E-73 27790 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 162.82 129.86 118.37 78.736 150.22 180.22 308.38 320.08 111 74 145 175 308 310 4 3 5 6 9 7 959000 13878 1863;1795;2283;2975;3072 13377 32276;32277;32278;32279;32280;32281;32282;32283;32284;32285;32286 37525;37526;37527;37528;37529;37530;37531;37532;37533;37534;37535;37536;37537;37538;37539 37536 15 LTTPTYGDLNHLVSATMSGVTTCLR Deamidation (N) 2708.315 0.31495149 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 1 0 0 7.75 0.433 1 3 83.717 83.717 3 2.7482E-12 27481 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.316 58.351 24.543 4.3085 49.494 39.036 43.176 29.452 23 5 47 37 42 28 2 1 2 2 2 2 14451 13879 1863;1795;2283;2975;3072 13377 32287;32288;32289;32290 37540;37541;37542;37543 37541 722 4 LTTPTYGDLNHLVSATMSGVTTCLR Oxidation (M) 2723.3259 0.32585053 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 1 0 9.33 0.471 2 1 79.781 79.781 3;4 1.2295E-22 30668 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.721 77.407 29.839 17.881 19.335 0 0 38.848 28 19 19 0 0 37 1 1 1 0 0 2 16606 13880 1863;1795;2283;2975;3072 13377 32291;32292;32293 37544;37545;37546 37545 150 3 LTTPTYGDLNHLVSATMSGVTTCLR Oxidation (M);Deamidation (N) 2724.3099 0.30986611 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 1 1 0 10 0 1 87.23 87.23 4 2.0431E-11 28143 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.383 44.768 21.311 0 25.035 18.523 39.967 29.774 20 0 24 19 40 29 1 0 1 1 1 1 4551.1 13881 1863;1795;2283;2975;3072 13377 32294 37547 37547 722 150 1 LTTPTYGDLNHLVSATMSGVTTSLR Unmodified 2634.3323 0.33231612 2805 Q922F4 Tubb6 Tubulin beta-6 chain yes yes 0 0 0 0 11 0 1 88.064 88.064 3 1.2124E-16 28051 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.524 67.532 0 0 0 0 15 0 0 0 0 0 15 0 0 0 0 0 1 0 4189.3 13882 2805 13378 32295 37548 37548 1 LTTSTTIENIEITIK Unmodified 1675.9244 0.92438203 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 8 0 1 78.693 78.693 3 0.00034237 27406 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.528 36.947 0 38.231 68.036 0 0 0 0 37 65 0 0 0 0 1 1 0 0 0 2031 13883 3274 13379 32296 37549 37549 1 LTTTSGQSR Unmodified 949.48287 0.48287317 639 F7CYX4;B8QI34;Q8BSS9 Ppfia2 Liprin-alpha-2 yes no 0 0 0 0 7.5 0.5 1 1 29.909 29.909 2 0.004761 5403 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.744 48.769 26.732 18.413 14 20.767 0 15.99 25 19 14 19 0 15 1 1 1 1 0 1 3751.1 13884 639 13380 32297;32298 37550;37551 37550 2 LTTVAEK Unmodified 760.43307 0.43306943 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 8 0 1 48.24 48.24 2 0.04575 13026 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.674 10.992 0 0 78.105 44.065 82.825 57.333 0 0 74 46 83 56 0 0 1 1 1 1 3381.6 13885 3358 13381 32299 37552 37552 1 LTTYAMTVPFVR Unmodified 1397.7377 0.73770765 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 8 4.97 1 1 1 77.244 77.244 2;3 6.7232E-12 20773 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.11 86.418 29.877 0 28.027 47.547 94.436 19.168 28 0 28 46 93 19 1 0 1 1 2 1 14369 13886 2435 13382 32300;32301;32302 37553;37554;37555 37555 3 LTVADALEPVQFEDGQK Unmodified 1858.9313 0.93125832 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 0 9 4 1 1 78.958 78.958 3 5.5413E-05 29716 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.939 46.833 207.14 20.491 154.96 65.123 137.45 144.25 194 28 148 65 139 139 2 1 2 1 2 2 15402 13887 3119 13383 32303;32304 37556;37557 37556 2 LTVDGLEK Unmodified 873.48075 0.48074791 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 8.67 3.09 1 1 1 59.866 59.866 2;3 0.00107 20126 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.26 32.793 590.05 243.94 530.83 97.894 477.89 559.87 554 275 507 93 472 538 3 3 2 1 2 3 34540 13888 2243 13384 32305;32306;32307 37558;37559;37560 37558 3 LTVEDLEK Unmodified 945.50188 0.50187728 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 6 0 1 62.993 62.993 2 0.022648 21499 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.679 10.409 59.326 63.923 73.97 44.078 95.253 0 56 65 74 46 93 0 1 1 1 1 1 0 4913.6 13889 2115 13385 32308 37561 37561 1 LTVEDLEKER Unmodified 1230.6456 0.6455814 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 1 5.5 0.5 1 1 55.18 55.18 3 0.034988 18447 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.454 1.3376 216.06 120.51 193.79 199.34 61.238 176.27 203 130 195 194 65 167 2 2 2 2 1 2 21130 13890 2115 13386 32309;32310 37562;37563 37562 2 LTVEDPVTVEYITR Unmodified 1633.8563 0.85630246 3399 Q9Z2U0;A0A338P7D7;Q9CWH6 Psma7;Psma8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 0 6.75 3.63 1 2 1 72.356 72.356 2;3 8.2195E-05 26458 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.859 48.556 39.163 76.445 42.747 117.33 161.78 126.79 37 75 46 111 166 121 1 2 1 2 4 2 27528 13891 3399 13387 32311;32312;32313;32314 37564;37565;37566;37567 37565 4 LTVEEAVR Unmodified 915.50255 0.50254598 3266;581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;B1ARU1;Q9QXS1;E9Q3W4 Macf1;Plec Microtubule-actin cross-linking factor 1;Plectin no no 0 0 0 0 5 0 1 49.496 49.496 2 0.046267 15730 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.156 33.852 88.41 41.75 73.754 75.494 52.78 67.784 83 46 74 74 56 65 1 1 1 1 1 1 5862.9 13892 581;3266 13388 32315 37568 37568 1 LTVFTTLMDVTK Unmodified 1367.737 0.73703895 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 11.5 0.5 1 1 91.931 91.931 2 1.2074E-14 29454 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 138.99 103.55 15.022 0 0 0 46.414 0 14 0 0 0 46 0 1 0 0 0 2 0 9790.3 13893 3342 13389 32316;32317 37569;37570;37571 37569 3 LTVHEGQELALGCLAQTK Unmodified 1967.0146 0.014610792 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 7 0.816 1 1 1 67.044 67.044 3 4.6871E-17 22568 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.954 68.305 118.09 78.612 103.93 25.209 83.362 66.911 111 83 102 28 83 65 2 2 2 1 2 2 7486.8 13894 195 13390 32318;32319;32320 37572;37573;37574 37573 3 LTVIDTPGFGDQINNENCWEPIEK Unmodified 2788.3014 0.30140992 3384;402 A0A2R8W6V9;A0A2R8VHB2;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 8.17 3.48 2 1 1 2 84.845 84.845 3;4 1.7347E-15 33144 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.593 68.862 177.98 128.85 94.164 175.21 127.78 225.53 167 130 92 167 130 214 4 3 2 4 2 3 53141 13895 402;3384 13391 32321;32322;32323;32324;32325;32326 37575;37576;37577;37578;37579;37580 37580 6 LTVLVSALEIYDSCSLLLHR Unmodified 2301.2403 0.24025363 2670 Q8R570;B2FDF6 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 11 0 1 102.58 102.58 3 0.00249 33979 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.988 32.705 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 1837 13896 2670 13392 32327 37581 37581 1 LTVNDFVR Unmodified 962.51853 0.5185304 2396;3270 Q8BH59;Q9QXX4 Slc25a12;Slc25a13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 no no 0 0 0 0 9.25 2.28 1 1 1 1 62.905 62.905 2 0.0050681 20658 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.99 62.585 478.07 203.19 450.41 611.39 224.51 289.94 449 222 450 598 241 278 3 2 3 4 2 3 62803 13897 2396;3270 13393 32328;32329;32330;32331 37582;37583;37584;37585 37582 4 LTVNEAVK Unmodified 872.49673 0.49673232 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 7 0 1 51.802 51.802 2 0.023009 15361 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.465 31.153 69.42 64.479 0 0 72.386 146.11 65 65 0 0 74 139 1 1 0 0 1 1 4999.8 13898 3266 13394 32332 37586 37586 1 LTVPDDMAANCIYLNIPSK Unmodified 2134.0439 0.04386201 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 7.5 0.5 1 1 83.088 83.088 3 8.5041E-06 30183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.386 48.469 29.792 28.859 17.902 40.467 0 49.036 28 28 19 38 0 46 2 1 1 2 0 1 7193.7 13899 2980 13395 32333;32334 37587;37588 37587 2 LTVPSADLK Unmodified 942.5386 0.53859714 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 61.05 61.05 2;3 3.3388E-05 19138 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.4 77.636 524.79 298.56 271.55 200.3 1034.8 454.44 492 315 263 199 1013 454 5 4 3 3 5 5 61508 13900 1497 13396 32335;32336;32337;32338 37589;37590;37591;37592;37593 37591 5 LTVSWLKDDEPLYIGNR Unmodified 2018.0473 0.047291129 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 1 10.7 1.7 1 1 1 77.769 77.769 3 1.1267E-24 24057 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.61 112.81 165.95 161.73 372.63 239.76 134.68 163.52 157 167 364 242 139 157 2 2 3 3 2 2 43701 13901 20;2354 13397 32339;32340;32341 37594;37595;37596 37595 3 LTVVILEAK Unmodified 984.62193 0.62193284 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 10.5 1.41 3 1 2 1 1 83.032 83.032 2;3 2.0596E-06 23053 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 159.58 16.3 666.13 931.79 1076.8 1149 686.32 1324.6 627 925 1079 1117 714 1258 10 10 10 10 7 12 115390 13902 1553 13398 32342;32343;32344;32345;32346;32347;32348;32349 37597;37598;37599;37600;37601;37602;37603;37604;37605;37606;37607;37608;37609;37610;37611;37612 37605 16 LTVYLGK Unmodified 792.47454 0.47454032 1145 J3QNU6;Q8BWG8;E0CY53;E0CYB1;Q5F2D9;Q91YI4 Arrb1;Arrb2 Beta-arrestin-1;Beta-arrestin-2 yes no 0 0 0 0 11 0.816 1 1 1 65.443 65.443 2 0.012542 17878 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 117.62 51.534 109.45 0 140.66 0 174.68 127.92 102 0 130 0 167 120 1 0 1 0 1 1 44399 13903 1145 13399 32350;32351;32352 37613;37614;37615 37614 3 LTWHSCPEDEAQ Unmodified 1471.6038 0.60379294 3141 Q9DCC5;P23198 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 0 5 0 1 51.633 51.633 2 0.0039341 16801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.56 54.707 0 0 9.3483 8.7491 28.218 19.449 0 0 9 9 28 19 0 0 1 1 1 1 1947.7 13904 3141 13400 32353 37616 37616 1 LTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSR Unmodified 4140.8878 0.88783696 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 1 94.427 94.427 4 0.0024974 35309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.229 26.224 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1274.4 13905 20;2354 13401 32354 37617 37617 1 LTYDEAVQACLNDGAQIAK Unmodified 2078.9943 0.99426928 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 5.5 0.5 1 1 72.102 72.102 3;4 3.4618E-05 26329 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.496 29.526 73.555 26.164 58.824 40.441 37.384 38.375 69 28 56 37 37 37 2 1 1 1 1 1 9069.4 13906 3258 13402 32355;32356 37618;37619 37618 2 LTYTAEVSVPK Unmodified 1206.6496 0.64960415 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 7.5 0.5 1 1 62.25 62.25 2 5.8183E-05 19621 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.254 47.376 50.087 0 57.803 56.928 44.395 58.429 47 0 56 56 46 56 2 0 2 2 1 1 8047.5 13907 1446 13403 32357;32358 37620;37621 37621 2 LVAAEQQK Unmodified 885.49198 0.4919813 1709 P62077 Timm8b Mitochondrial import inner membrane translocase subunit Tim8 B yes yes 0 0 0 0 7 0 1 44.666 44.666 2 0.0046984 12003 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.73 65.38 79.108 0 49.373 0 0 0 74 0 46 0 0 0 1 0 1 0 0 0 3521.7 13908 1709 13404 32359 37622 37622 1 LVAAPLFELYDNAPGYGPIISSLPQLLSR Unmodified 3113.6801 0.680123 2926 Q9CQF3;A0A1D5RM23;A0A1D5RLT7 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes no 0 0 0 0 11 0 2 112.86 112.86 3;4 6.022E-06 36268 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.05 36.428 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 4971.4 13909 2926 13405 32360;32361 37623;37624 37624 2 LVAASQAALGL Unmodified 1012.5917 0.59169534 655 CON__P02768-1 yes yes 0 0 0 0 11 2 1 1 81.289 81.289 2 0.0017598 27970 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.476 41.475 65.191 0 44.056 27.175 42.684 39.442 61 0 42 28 42 37 2 0 1 1 1 1 10337 + 13910 655 13406 32362;32363 37625;37626 37625 2 LVACWTK Unmodified 876.45276 0.45275902 2001 Q3UPL0;S4R2A9;S4R256 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 10.5 0.5 1 1 61.904 61.904 2 0.012872 16988 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.63 58.23 0 118.1 0 118.51 149.36 0 0 111 0 111 148 0 0 1 0 1 1 0 12758 13911 2001 13407 32364;32365 37627;37628 37627 2 LVAEFTTSLTNFQK Unmodified 1597.8352 0.83517309 1254 Q8BH40;O70439 Stx7 Syntaxin-7 yes no 0 0 0 0 11 1.58 1 1 1 1 92.675 92.675 3 4.8099E-18 27394 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.88 102.05 42.341 78.888 138.39 59.156 25.923 48.296 40 79 134 59 28 46 2 3 3 2 1 1 49505 13912 1254 13408 32366;32367;32368;32369 37629;37630;37631;37632 37630 4 LVAEFTTSLTNFQK Deamidation (N) 1598.8192 0.81918867 1254 Q8BH40;O70439 Stx7 Syntaxin-7 yes no 0 1 0 0 13 0 1 85.251 85.251 3 0.0027477 33400 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.034 35.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13913 1254 13408 32370 37633 37633 343 1 LVAGEMGQNEPDQGGQR Unmodified 1784.8112 0.81115996 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 4 0 1 47.996 47.996 3 0.0042238 15299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.382 30.589 0 0 47.696 46.601 44.335 47.771 0 0 46 46 46 46 0 0 1 1 1 1 3698.8 13914 2879 13409 32371 37634 37634 1 LVAGSLAGAIAQSSIYPMEVLK Unmodified 2217.2079 0.20789087 517 A2ASZ8 Slc25a25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 0 0 0 0 11 0 1 96.339 96.339 4 1.0806E-09 31448 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.924 45.273 20.292 18.848 0 0 0 20.254 19 19 0 0 0 19 1 1 0 0 0 1 2204.9 13915 517 13410 32372 37635 37635 1 LVALLDTLDR Unmodified 1127.655 0.65502388 1654 P58389 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 0 9 0.816 1 1 1 87.928 87.928 2 0.00010459 31007 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.01 38.767 29.647 96.047 54.162 89.121 29.288 49.036 28 93 56 83 28 46 1 3 2 2 1 1 40154 13916 1654 13411 32373;32374;32375 37636;37637;37638 37637 3 LVALQGQSLILECIAEGFPTPTIK Unmodified 2597.4139 0.4138609 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 10 0.632 1 3 1 103.12 103.12 3;4;5 2.2012E-15 33272 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.702 53.647 35.974 13.888 19 0 0 23.254 34 14 19 0 0 22 3 1 1 0 0 2 10451 13917 456 13412 32376;32377;32378;32379;32380 37639;37640;37641;37642;37643;37644 37642 6 LVALYNQGHIKPR Unmodified 1507.8623 0.86233131 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 1 4.67 5.19 2 1 51.988 51.988 3;4 8.346E-37 10487 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 155.53 95.044 79.814 28.427 87.01 95.947 27.454 79.95 75 28 83 93 28 75 2 1 1 2 1 1 14676 13918 2162 13413 32381;32382;32383 37645;37646;37647 37647 3 LVAPLAPDMQVLVIPLLDK Unmodified 2044.2006 0.20062065 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 11 0 1 106.67 106.67 3 0.0091435 35139 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.999 27.211 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 705.48 13919 2054 13414 32384 37648 37648 1 LVAPLLATVTILDDDHAGIFSFQDR Unmodified 2726.4279 0.42793106 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 10 0.816 1 1 1 104.29 104.29 4 1.1738E-16 33432 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.184 62.147 25.403 13.248 9.0961 21.574 0 10.66 25 13 9 21 0 10 2 2 1 3 0 1 11443 13920 2619 13415 32385;32386;32387 37649;37650;37651;37652;37653 37651 5 LVAQLDTEGIGSLGPGYEDR Unmodified 2089.0328 0.032763277 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 8 3.56 1 1 1 76.257 76.257 3 5.2672E-39 28351 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 149.72 129.58 0 68.534 37.458 58.975 37 59.696 0 65 37 56 37 56 0 2 1 2 1 1 37247 13921 195 13416 32388;32389;32390 37654;37655;37656 37654 3 LVAQLYK Unmodified 833.50109 0.50108942 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 9.6 4.36 1 2 1 1 61.86 61.86 2;3 0.0059265 16255 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.113 61.778 1438.3 934.61 1129.7 730.1 1066.6 1151.8 1374 966 1124 725 1084 1109 5 4 3 3 3 4 573440 13922 3011 13417 32391;32392;32393;32394;32395 37657;37658;37659;37660;37661 37658 5 LVARPEPATGFTLEFR Unmodified 1802.9679 0.9679186 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 1 9.75 1.92 1 2 1 67.189 67.189 3;4 5.0947E-12 22132 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.39 97.656 464.3 466.41 268.38 423.45 321.58 481.79 436 472 273 403 326 459 4 5 3 2 2 3 98054 13923 2131 13418 32396;32397;32398;32399 37662;37663;37664;37665;37666 37662 5 LVASAYSIAQK Unmodified 1149.6394 0.63937381 255;3362 A0A1B0GRV0;D3Z5X0;Q9Z0S1 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 64.008 64.008 3 8.5025E-09 17780 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.75 86.599 346.19 191.3 264.62 405.69 64.782 138.58 325 195 260 390 65 130 5 3 3 4 1 2 54660 13924 255;3362 13419 32400;32401;32402;32403;32404;32405 37667;37668;37669;37670;37671;37672 37669 6 LVAVAQSGFPLR Unmodified 1256.7241 0.7241065 755 D3Z2E3;F6R6F1;E9Q632;O54916;A0A1L1SRE4;D6RIN6 Reps1 RalBP1-associated Eps domain-containing protein 1 yes no 0 0 0 0 11.5 0.5 1 1 70.569 70.569 2 0.0011402 20340 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.066 33.507 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 5902.1 13925 755 13420 32406;32407 37673;37674 37673 2 LVAYYTLIGASGQR Unmodified 1510.8144 0.81437807 1297 P01027 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 0 1 0 1 76.162 76.162 3 7.103E-05 26290 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.927 49.074 9.612 8.9279 0 20.411 18.936 0 9 9 0 19 19 0 1 1 0 1 1 0 2050.8 13926 1297 13421 32408 37675 37675 1 LVCEDPPHELPQEGK Unmodified 1746.8247 0.82468476 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 4 0 1 52.38 52.38 3 1.618E-05 17378 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.068 57.782 30.044 0 0 0 58.576 0 28 0 0 0 56 0 1 0 0 0 1 0 6415.5 13927 2054 13422 32409 37676 37676 1 LVCEDVNVDR Unmodified 1217.571 0.57103625 488 A2ALS5;A2ALS4;A2ALS3 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 0 0 0 8 5 1 1 50.636 50.636 2 0.048882 16470 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.725 29.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13928 488 13423 32410;32411 37677;37678 37678 2 LVDAICDK Unmodified 932.46372 0.46371763 3010 Q9CZT8;A2A7Z6 Rab3b Ras-related protein Rab-3B yes no 0 0 0 0 6.5 0.5 1 1 60.364 60.364 2 0.012545 19442 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.948 37.094 168.6 44.014 120.26 161.05 238.13 160.57 158 46 121 158 240 157 2 1 2 2 2 2 14503 13929 3010 13424 32412;32413 37679;37680 37680 2 LVDGCYSFWQAGLLPLLHR Unmodified 2244.1514 0.15137904 2599 Q8K2I1;D3YWJ4 Fntb Protein farnesyltransferase subunit beta yes no 0 0 0 0 11.5 0.5 1 1 92.813 92.813 3 0.00077493 29843 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.09 41.059 9.5993 9.576 9.6896 0 0 9.594 9 9 9 0 0 9 1 1 1 0 0 1 2740.6 13930 2599 13425 32414;32415 37681;37682;37683 37681 3 LVDGSLLTLDTYLGQFPDIK Unmodified 2207.1726 0.17255122 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 9.56 2.11 2 1 2 2 2 103.27 103.27 3;4 6.7592E-12 36256 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.9 80.308 153.93 124.33 111.4 116.37 44.9 116.53 144 122 108 115 45 110 6 5 5 5 3 5 80086 13931 90 13426 32416;32417;32418;32419;32420;32421;32422;32423;32424 37684;37685;37686;37687;37688;37689;37690;37691;37692;37693;37694 37686 11 LVDIICDK Unmodified 974.51067 0.51066783 1743;1513 P35276;P62823;A0A286YDR2 Rab3d;Rab3c Ras-related protein Rab-3D;Ras-related protein Rab-3C no no 0 0 0 0 10.5 2.5 1 1 70.848 70.848 2;3 0.029679 23760 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.813 28.912 176.54 245.88 236.88 209.32 207.52 256.31 167 246 242 208 216 246 2 2 2 2 2 2 23047 13932 1513;1743 13427 32425;32426 37695;37696 37695 2 LVDNIFPEDPEDGLVK Unmodified 1798.8989 0.89889556 2263 Q6ZQ18 Efr3b Protein EFR3 homolog B yes yes 0 0 0 0 13 0 1 83.7 83.7 3 0.00054067 32662 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.817 31.227 39.342 0 60.394 0 0 39.442 37 0 56 0 0 37 1 0 1 0 0 1 6044.2 13933 2263 13428 32427 37697 37697 1 LVDPLYSIK Unmodified 1046.6012 0.60119739 1285 O88958 Gnpda1 Glucosamine-6-phosphate isomerase 1 yes yes 0 0 0 0 8.5 0.5 1 1 74.729 74.729 2 0.0010171 24823 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.15 40.533 54.219 118.92 50.587 42.891 66.701 76.981 51 116 51 42 65 74 1 2 1 1 1 2 8828.1 13934 1285 13429 32428;32429 37698;37699 37699 2 LVDQALLTMDTYLGQFPDIK Unmodified 2280.1712 0.17117101 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 9.5 2.06 2 1 1 107.86 107.86 3;4 1.0631E-08 36785 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.027 59.147 17.08 26.443 44.064 20.661 11.914 36.244 16 25 42 21 12 34 1 2 3 2 1 2 13839 13935 1157;2210 13430 32430;32431;32432;32433 37700;37701;37702;37703 37700 4 LVDSPATPIWQLISK Unmodified 1666.9294 0.92940782 1426 P21126 Ubl4a Ubiquitin-like protein 4A yes yes 0 0 0 0 10 0.816 1 1 1 91.866 91.866 3 1.943E-07 29849 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.07 80.746 39.564 27.124 29.481 48.218 74.2 28.811 37 28 28 47 74 28 1 1 1 2 2 1 12891 13936 1426 13431 32434;32435;32436 37704;37705;37706 37705 3 LVDTGDK Unmodified 746.38103 0.38103386 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 13 0 1 46.158 46.158 2 0.03171 14450 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.916 19.112 147.61 125.83 151.84 0 0 138.58 139 130 148 0 0 130 1 1 1 0 0 1 10817 13937 2148 13432 32437 37707 37707 1 LVDTGDKFR Unmodified 1049.5506 0.55055881 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 8 0.816 1 1 1 51.207 51.207 3 0.00056223 14369 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.39 80.705 394.62 159.71 756.97 624.33 436.55 669.78 371 167 736 620 451 640 2 1 3 3 2 3 94948 13938 2148 13433 32438;32439;32440 37708;37709;37710 37709 3 LVDVICEK Unmodified 974.51067 0.51066783 1761 P63011 Rab3a Ras-related protein Rab-3A yes yes 0 0 0 0 8.25 2.95 1 1 1 1 65.6 65.6 2;3 0.0032792 21958 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.296 43.738 848.86 575.45 754.33 923.1 1064.1 1223.3 798 592 756 904 1098 1176 4 3 2 4 4 4 151980 13939 1761 13434 32441;32442;32443;32444 37711;37712;37713;37714 37712 4 LVDVPFQVEFPAPK Unmodified 1584.8552 0.85518025 222 A0A0R4J2C6;A0A0R4J2C1;Q9QXJ1;A0A087WR62;A0A087WPS7;A0A087WPI2;A0A1B0GT76;A0A087WQC5 Apbb1 Amyloid beta A4 precursor protein-binding family B member 1 yes no 0 0 0 0 8 0 1 87.456 87.456 3 0.00032981 31624 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.964 38.988 20.244 28.427 0 0 0 20.254 19 28 0 0 0 19 1 1 0 0 0 1 2055.4 13940 222 13435 32445 37715 37715 1 LVDWIILQCAEDIEHPPPGR Unmodified 2357.1838 0.18380139 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 8.44 2.54 2 2 3 2 90.262 90.262 3;4 1.2402E-10 34217 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.85 79.953 29.603 57.741 128.17 83.569 140.97 77.442 28 56 121 80 138 75 2 2 4 4 5 4 30720 13941 3315 13436 32446;32447;32448;32449;32450;32451;32452;32453;32454 37716;37717;37718;37719;37720;37721;37722;37723;37724;37725;37726 37717 11 LVDYDSAR Unmodified 937.45051 0.45051041 1157;90;2210 A0A0G2JEG8;Q7TQF7;S4R2J8;S4R1B8;S4R270;D3Z6Q9;O08539;Q6P1B9 Amph;Bin2;Bin1 Amphiphysin;Bridging integrator 2;Myc box-dependent-interacting protein 1 no no 0 0 0 0 5 0.816 1 1 1 47.213 47.213 2 0.00097439 14590 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.04 88.844 253.09 99.927 119.12 230.15 54.215 215.92 237 102 121 218 56 204 3 2 2 3 1 3 58523 13942 90;1157;2210 13437 32455;32456;32457 37727;37728;37729 37728 3 LVEAFGGAK Unmodified 890.48617 0.48616764 869 F7BX42;E9PZM8;Q99J85;H3BLN6;F8VQB8 Nptxr;Npcd Neuronal pentraxin receptor yes no 0 0 0 0 8 0 1 62.26 62.26 2 0.052769 19609 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.37 16.152 68.818 62.805 102.58 82.377 118.45 95.758 65 65 102 83 120 93 1 1 1 1 1 1 3641.3 13943 869 13438 32458 37730 37730 1 LVEAGRPFIK Unmodified 1128.6655 0.66552898 3127 Q9DBL1;E9Q5L3 Acadsb Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 1 9 0 1 56.51 56.51 3 0.039098 16179 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.791 12.488 0 168.11 0 179.88 315.38 261.76 0 158 0 170 318 254 0 1 0 1 1 1 10812 13944 3127 13439 32459 37731 37731 1 LVEAISR Unmodified 786.45995 0.45995289 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 50.529 50.529 2 0.038991 15556 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.469 27.681 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 3712.8 13945 3204 13440 32460 37732 37732 1 LVEALCAEHQINLIK Unmodified 1749.9447 0.94474031 1013 Q6ZWZ6;F7AEH4;A0A1W2P7A1 Rps12 40S ribosomal protein S12 yes no 0 0 0 0 7.33 0.471 2 1 72.435 72.435 3;4 2.154E-05 25101 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.54 59.817 157.91 236.2 0 117.17 334.77 237.76 148 232 0 111 333 232 2 3 0 2 3 3 20095 13946 1013 13441 32461;32462;32463 37733;37734;37735 37734 3 LVEATEGLR Unmodified 986.53966 0.53965977 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 5 0 1 53.732 53.732 2 0.0088424 17745 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.628 41.521 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13947 2123 13442 32464 37736 37736 1 LVECLETVLNK Unmodified 1316.701 0.70098779 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 10.8 2.28 1 1 2 85.866 85.866 2;3 9.2426E-07 29986 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.29 54.45 128.67 36.623 75.881 137.43 157.91 0 120 38 74 131 157 0 3 2 2 4 4 0 33428 13948 1400 13443 32465;32466;32467;32468 37737;37738;37739;37740;37741 37739 5 LVECQYELTDR Unmodified 1424.6606 0.66057954 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 4 0 1 56.962 56.962 2 0.006892 19620 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.633 45.607 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 4811.4 13949 2046 13444 32469 37742 37742 1 LVEDEER Unmodified 888.41888 0.41887593 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 1 0 1 38.131 38.131 2 0.027191 10452 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.9 31.218 78.739 43.453 74.535 56.766 0 29.848 74 47 74 56 0 28 2 2 2 2 0 1 19953 13950 3204 13445 32470 37743;37744 37744 2 LVEDEERR Unmodified 1044.52 0.51998696 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 3 0 1 32.204 32.204 3 0.0040632 8384 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.06 45.381 78.217 142.37 78.42 54.992 81.993 66.95 74 140 83 56 83 65 1 1 1 1 1 1 9199.2 13951 3204 13446 32471 37745 37745 1 LVEDHLAVQSLIR Unmodified 1491.8409 0.84092717 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 6.5 0.5 1 1 65.181 65.181 3 3.407E-11 22405 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.51 76.802 68.913 112.54 118.68 115.34 0 108.73 65 112 121 112 0 102 1 2 2 2 0 2 27318 13952 628;2074 13447 32472;32473 37746;37747 37746 2 LVEDMENK Unmodified 976.45355 0.45354688 495;1565 A2AMW0;P47757 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 4.5 0.5 1 1 57.007 57.007 2 0.012545 19348 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.948 35.394 148.17 185.36 152.42 149.65 160.86 202.21 139 186 158 148 167 194 1 2 2 2 2 2 21498 13953 495;1565 13448 32474;32475 37748;37749 37749 2 LVEEAIQCAEK Unmodified 1288.6333 0.63330216 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 0 8.2 3.97 1 1 1 2 67.829 67.829 2;3 8.8741E-13 24780 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.79 92.521 236.88 225.58 252.89 263.8 282.35 319.2 223 231 253 260 292 307 2 3 2 3 3 3 41610 13954 2401 13449 32476;32477;32478;32479;32480 37750;37751;37752;37753;37754 37754 5 LVEEEANILGR Unmodified 1241.6616 0.66156582 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 4 0 1 65.658 65.658 2 0.03248 23403 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.167 12.109 49.358 0 0 30.604 0 99.138 46 0 0 28 0 93 1 0 0 1 0 1 5954.3 13955 2208 13450 32481 37755 37755 1 LVEEIGWSYTGALNQK Unmodified 1806.9152 0.91521432 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 7 1 1 1 80.686 80.686 3 6.5814E-06 28340 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.068 55.817 69.03 27.338 96.938 38.161 73.673 57.594 65 28 93 37 74 56 2 1 2 1 2 2 6655.7 13956 644 13451 32482;32483 37756;37757 37757 2 LVEGCLVGGR Unmodified 1058.5543 0.55426398 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 55.191 55.191 2 1.2935E-05 17854 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130.31 83.864 296.42 284.15 73.413 314.59 242.42 165.2 278 287 83 296 251 159 2 2 1 2 2 1 31640 13957 680 13452 32484;32485 37758;37759 37758 2 LVEGILHAPDAGWGNLVYVVNYPK Unmodified 2623.3799 0.37985866 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WR97;A0A087WSE4;A0A087WP57 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 9.5 0.5 1 1 91.954 91.954 3;4 2.1254E-05 32602 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.992 34.468 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1934.5 13958 2793 13453 32486;32487 37760;37761 37760 2 LVEHFCAEFK Unmodified 1278.6067 0.60669348 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 7 0 1 61.996 61.996 3 0.0010907 20191 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.006 50.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13959 2137 13454 32488 37762 37762 1 LVEIAQVPK Unmodified 995.60153 0.60153174 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 8.5 0.5 1 1 65.036 65.036 2 0.0005642 20965 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.52 71.171 137.15 137.02 97.1 71.045 38.702 148.17 129 139 93 65 37 139 2 2 1 1 1 1 17608 13960 2783 13455 32489;32490 37763;37764 37763 2 LVEIEPGKR Unmodified 1039.6026 0.60259438 2402 Q8BHC1 Rab39b Ras-related protein Rab-39B yes yes 0 0 0 1 7 0 1 49.579 49.579 3 0.040757 14294 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.268 29.036 48.868 44.91 44.222 58.572 0 69.29 46 46 46 56 0 65 1 1 1 1 0 1 5487 13961 2402 13456 32491 37765 37765 1 LVENAVLK Unmodified 884.53312 0.53311783 1233 O55074;Q7TN79 Akap7 A-kinase anchor protein 7 isoform alpha;A-kinase anchor protein 7 isoform gamma yes no 0 0 0 0 8 0 1 59.771 59.771 2 0.043526 18474 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.27 21.921 0 48.944 0 71.045 0 69.29 0 46 0 65 0 65 0 1 0 1 0 1 2879.8 13962 1233 13457 32492 37766 37766 1 LVEPGSPAEK Unmodified 1025.5393 0.53932542 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 0 7.25 3.34 2 1 1 49.698 49.698 2;3 5.7583E-05 15882 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.83 49.031 99.076 172.65 230.89 93.72 251.62 317.95 93 167 223 92 250 305 2 3 3 2 3 4 22665 13963 1815 13458 32493;32494;32495;32496 37767;37768;37769;37770 37770 4 LVEQLLSPR Unmodified 1053.6182 0.61824444 410 A0A338P6R8;A0A338P769 yes no 0 0 0 0 10 1.87 1 1 1 1 70.147 70.147 2 0.00018232 23462 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.22 61.597 907.16 487.95 937.07 907.26 920.55 642.43 851 495 914 897 941 620 5 4 5 6 6 4 120080 13964 410 13459 32497;32498;32499;32500 37771;37772;37773;37774;37775;37776 37771 6 LVETLQADSGLLLDALVAR Unmodified 1996.1205 0.12045607 3047 Q9D1X0 Nol3 Nucleolar protein 3 yes yes 0 0 0 0 7.5 0.5 1 1 108.95 108.95 3 3.9045E-47 37607 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 159.95 127.14 2.1199 14.62 7.9786 14.668 8.4462 11.485 2 14 8 14 9 11 1 3 1 3 2 2 3190.1 13965 3047 13460 32501;32502 37777;37778;37779 37777 3 LVEVDSGR Unmodified 873.4556 0.45559579 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 6 0 1 45.475 45.475 2 0.0077228 13242 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.916 47.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13966 1379 13461 32503 37780 37780 1 LVEWCEAK Unmodified 1033.4903 0.49026674 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 10.7 3.3 1 2 62.47 62.47 2;3 0.0040307 22245 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.923 47.359 198.31 125.5 106.16 150.14 113.34 167.4 186 130 102 139 111 158 3 2 2 2 2 2 17235 13967 919;937 13462 32504;32505;32506 37781;37782;37783 37783 3 LVEYDIDEVVYDEDSPYQNIK Unmodified 2545.1748 0.17479565 1845 P97355;E9PZ58 Sms Spermine synthase yes no 0 0 0 0 4.5 0.5 1 1 85.786 85.786 3 3.2486E-07 32758 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.2 50.469 0 0 0 9.6683 8.9699 9 0 0 0 9 9 9 0 0 0 1 1 1 4750.1 13968 1845 13463 32507;32508 37784;37785 37785 2 LVFDEYLK Unmodified 1025.5433 0.54334816 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 9.33 2.62 1 1 1 76.297 76.297 2 0.0024438 26296 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.1 84.853 196.48 120.38 314.61 185.67 309.4 336.56 185 121 306 185 315 324 2 1 3 2 3 3 27746 13969 1050;1380 13464 32509;32510;32511 37786;37787;37788 37787 3 LVFGLLNGR Unmodified 987.58655 0.58655038 1440 Q543K9;P23492;A0A2I3BS22;A0A2I3BQH2;Q9D8C9 Pnp;Pnp2 Purine nucleoside phosphorylase yes no 0 0 0 0 1 0 1 77.917 77.917 2 0.039531 27107 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.167 37.468 29.546 17.068 69.157 0 26.605 78.125 28 19 65 0 28 74 1 1 1 0 1 1 2644.6 13970 1440 13465 32512 37789 37789 1 LVFGLLNGR Deamidation (N) 988.57057 0.57056597 1440 Q543K9;P23492;A0A2I3BS22;A0A2I3BQH2;Q9D8C9 Pnp;Pnp2 Purine nucleoside phosphorylase yes no 0 1 0 0 10 0 1 81.243 81.243 2 0.0019502 25661 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.29 73.569 29.877 33.097 0 0 36.61 0 28 33 0 0 35 0 1 1 0 0 1 0 6305.6 13971 1440 13465 32513 37790 37790 530 1 LVFLGEQSVGK Unmodified 1175.655 0.65502388 1515;1697 P35279;P61294 Rab6a;Rab6b Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 0 0 0 10.8 1.48 1 1 1 1 72.029 72.029 2;3 1.069E-08 21502 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.32 71.49 168.06 79.657 0 60.557 72.313 185.55 157 83 0 56 74 176 2 1 0 1 2 3 42117 13972 1515;1697 13466 32514;32515;32516;32517 37791;37792;37793;37794 37792 4 LVFLGLDNAGK Unmodified 1145.6445 0.64445919 2837 Q99JZ4;A0A1W2P720;A0A1W2P869;A0A1W2P6N3;P36536 Sar1a GTP-binding protein SAR1a no no 0 0 0 0 10.5 0.5 1 1 79.781 79.781 2;3 2.6569E-05 25017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.01 70.165 0 98.952 0 0 121.91 105.25 0 93 0 0 120 102 0 1 0 0 1 1 42715 13973 2837 13467 32518;32519 37795;37796 37795 2 LVFLNLQGNSLCQEEGIR Unmodified 2089.0626 0.062623617 3203 Q9JHK4;A0A2K6EDL0 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes no 0 0 0 0 10.5 0.5 1 1 82.088 82.088 3 1.4102E-06 26012 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.642 61.02 66.517 0 88.56 24.638 36.581 28.804 65 0 83 28 37 28 2 0 1 1 1 1 13256 13974 3203 13468 32520;32521 37797;37798 37797 2 LVFSCLAGVR Unmodified 1120.6063 0.60629955 3018 Q9D0B5 Tstd3 Thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3 yes yes 0 0 0 0 6.5 5.5 1 1 71.821 71.821 2 0.0061343 18421 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.573 45.318 0 48.037 54.251 77.649 0 0 0 46 56 74 0 0 0 1 1 1 0 0 9991.9 13975 3018 13469 32522;32523 37799;37800 37800 2 LVFSNVNLK Unmodified 1032.5968 0.59678072 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 11.5 0.5 1 1 70.064 70.064 2;3 0.0005642 17774 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.52 48.585 207.86 91.945 153.57 74.062 72.022 250.59 195 102 148 69 74 237 1 1 1 1 1 2 39343 13976 1955 13470 32524;32525 37801;37802 37802 2 LVGAIVYYDGQHNDAR Unmodified 1789.8747 0.87474649 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 7.5 0.5 1 1 61.111 61.111 3 0.00035772 19036 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.165 40.784 118.04 104.38 90.515 73.033 130.5 61.86 111 107 93 74 130 60 2 2 2 2 2 1 18878 13977 2179 13471 32526;32527 37803;37804 37804 2 LVGFISAIPANIR Unmodified 1369.8082 0.80817048 476 F7APP3;A2AJH3;O70311 Nmt2 Glycylpeptide N-tetradecanoyltransferase;Glycylpeptide N-tetradecanoyltransferase 2 yes no 0 0 0 0 6.5 5.5 1 1 84.513 84.513 2;3 0.00082576 23495 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.552 37.711 0 19 28 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 4954.9 13978 476 13472 32528;32529 37805;37806 37806 2 LVGFVLR Unmodified 802.50651 0.50650915 588 B1ATV0;Q9WVD4 Clcn5 Chloride channel protein;H(+)/Cl(-) exchange transporter 5 yes no 0 0 0 0 11 0 1 69.298 69.298 2 0.026965 19763 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.457 0 0 47.696 74.678 56.757 0 0 0 46 74 56 0 0 0 1 1 1 0 0 7145.7 13979 588 13473 32530 37807 37807 1 LVGGTTPGK Unmodified 828.47052 0.47051757 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 46.768 46.768 2 0.00023013 11607 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.22 76.016 245.4 381.27 618.2 388.8 177.67 352.85 231 380 627 380 176 331 2 3 4 3 1 2 115400 13980 3337 13474 32531;32532;32533;32534 37808;37809;37810;37811 37809 4 LVGIFENQER Unmodified 1203.6248 0.62478638 1132 I1E4X7;Q9JI46;H3BLR8;B2KF67;A0A338P6T6;A0A338P6L9 Nudt3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes no 0 0 0 0 7 0 1 66.507 66.507 2 0.028139 22348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.55 31.742 48.803 55.521 46.195 0 45.451 77.587 46 56 46 0 46 74 1 1 1 0 1 1 10933 13981 1132 13475 32535 37812 37812 1 LVGMPAK Unmodified 714.40983 0.40983157 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 11 0 1 55.61 55.61 2 0.031221 13810 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.306 51.615 0 97.205 104.53 0 0 0 0 93 102 0 0 0 0 1 1 0 0 0 11167 13982 1533 13476 32536 37813 37813 1 LVGMSVLLAK Unmodified 1029.6256 0.62563801 2764 Q91XD6 Vps36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 0 1 0 1 81.197 81.197 2 0.0018719 28305 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.37 53.27 0 0 38.797 27.765 28.013 0 0 0 37 28 28 0 0 0 1 1 1 0 1550.6 13983 2764 13477 32537 37814 37814 1 LVGQGATAVLLDVPDSEGEAQAK Unmodified 2267.1645 0.16450573 2879 Q99N15;A2AFQ2 Hsd17b10 yes no 0 0 0 0 9.5 3.5 1 1 77.35 77.35 3 4.7055E-16 28369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.365 64.827 0 29.173 66.499 46.714 36.872 28.796 0 28 65 47 37 28 0 1 2 2 1 1 8381.4 13984 2879 13478 32538;32539 37815;37816 37815 2 LVGQSIIAYLQK Unmodified 1331.7813 0.78128702 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 6.5 5.5 1 1 84.562 84.562 3 1.8091E-08 23447 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.63 79.991 39.293 0 97.106 74.577 27.532 49.036 37 0 93 74 28 46 1 0 2 2 1 1 9716.1 13985 1043 13479 32540;32541 37817;37818 37818 2 LVGSQEELASWGHEYVR Unmodified 1958.9486 0.94863972 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 6 0 1 65.534 65.534 3 5.8106E-14 22634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.001 76.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13986 2697 13480 32542 37819 37819 1 LVHSGPSK Unmodified 823.4552 0.45520186 481 A2AKD7;Q61234 Snta1 Alpha-1-syntrophin yes no 0 0 0 0 9.5 0.5 1 1 34.166 34.166 3 0.0049597 6329 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.738 39.182 9.1647 28.19 58.854 0 0 49.036 9 28 56 0 0 46 1 1 1 0 0 1 813.99 13987 481 13481 32543;32544 37820;37821 37820 2 LVICPDEGFYK Unmodified 1339.6482 0.64822394 1686 P61082;F7CDT0;F6WMC0 Ube2m NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 0 7 0 2 72.946 72.946 2;3 2.4908E-05 25282 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.26 55.317 69.441 27.776 27.49 108.8 55.888 59.696 65 28 28 102 56 56 2 1 1 2 1 1 12906 13988 1686 13482 32545;32546 37822;37823 37823 2 LVIEEAER Unmodified 957.51311 0.51311067 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 5 0 1 52.17 52.17 2 0.014947 16959 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.498 40.103 66.286 47.666 0 52.028 81.29 0 62 49 0 49 80 0 1 1 0 1 1 0 14773 13989 1824 13483 32547 37824 37824 1 LVIEEQSGPFIWIPSK Unmodified 1841.9927 0.99273636 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0 Dlg2 Disks large homolog 2 yes no 0 0 0 0 10.5 2.5 1 1 90.225 90.225 3;4 2.4246E-05 32746 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.823 56.174 0 29.478 37.789 0 0 0 0 28 38 0 0 0 0 1 2 0 0 0 5659.7 13990 690 13484 32548;32549 37825;37826 37825 2 LVIGDHK Unmodified 780.44939 0.4493882 796 D6RI64;Q9R0P4;A0A0U1RPI0;A0A0U1RPJ7;D3YVR9 1110004F10Rik;Smap Small acidic protein yes no 0 0 0 0 7 0 1 45.304 45.304 3 0.053174 12470 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.115 24.143 49.189 0 28.352 38.081 35.633 38.425 46 0 28 37 37 37 1 0 1 1 1 1 3185.7 13991 796 13485 32550 37827 37827 1 LVIGQNGILSTPAVSCIIR Deamidation (N) 2011.1136 0.11359655 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 1 0 0 9.33 0.471 2 1 87.039 87.039 3 4.3212E-07 28285 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.85 71.668 29.27 0 19.589 19.458 7.5024 66.634 28 0 19 19 9 65 2 0 1 1 1 2 11935 13992 3022 13486 32551;32552;32553 37828;37829;37830 37830 1052 3 LVIIESDLER Unmodified 1185.6605 0.66050319 905;1106;1107;1656;906 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 6 0 1 71.64 71.64 3 0.014084 25568 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.436 29.35 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13993 905;906;1106;1107;1656 13487 32554 37831 37831 1 LVIITAGAR Unmodified 912.57565 0.57565135 1315;1293 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;A0A1B0GSL7;D3YVR7;D3YZE4;A0A1B0GSR2;P00342;A0A1B0GRE9 Ldha;Ldhc L-lactate dehydrogenase;L-lactate dehydrogenase A chain;L-lactate dehydrogenase C chain no no 0 0 0 0 9.8 4.45 1 1 2 1 60.615 60.615 2 3.6692E-18 15684 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 186.09 92.083 980.07 1105.2 1375.2 1050.5 1115.1 2594.5 925 1128 1375 1036 1144 2552 5 7 6 4 4 4 912800 13994 1315;1293 13488 32555;32556;32557;32558;32559 37832;37833;37834;37835;37836;37837;37838;37839 37833 8 LVILANNCPALR Unmodified 1352.7598 0.75984008 382 A0A2I3BQF4;P62889 Rpl30 60S ribosomal protein L30 yes no 0 0 0 0 8 4.97 1 1 1 68.533 68.533 2;3 8.2822E-27 17215 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 176.44 108.88 0 96.879 229.8 0 0 59.696 0 93 222 0 0 56 0 1 3 0 0 1 44991 13995 382 13489 32560;32561;32562 37840;37841;37842 37842 3 LVILANNCPALR Deamidation (N) 1353.7439 0.74385566 382 A0A2I3BQF4;P62889 Rpl30 60S ribosomal protein L30 yes no 0 1 0 0 12 0 1 68.436 68.436 3 0.00037049 17243 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.397 52.323 210.1 0 215.73 234.16 0 295.28 197 0 210 226 0 277 1 0 1 1 0 1 15909 13996 382 13489 32563 37843 37843 101 1 LVILDNYDLASEWAAK Unmodified 1819.9356 0.93561541 708 Q9CRC9;D3YWR1;D6RCJ1 Gnpda2 Glucosamine-6-phosphate isomerase 2;Glucosamine-6-phosphate isomerase yes no 0 0 0 0 9 0 1 91.185 91.185 3 0.0036348 32302 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.294 17.859 0 0 0 20.509 13.702 0 0 0 0 19 14 0 0 0 0 1 1 0 1924.5 13997 708 13490 32564 37844 37844 1 LVINGKPITIFQER Deamidation (N) 1627.9297 0.92974218 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W8;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 1 9 2.98 1 3 2 2 1 1 1 73.047 73.047 3;4 6.8161E-25 22195 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 151.3 112.08 6369.1 9095.1 11530 14292 12512 13008 5992 9048 11442 13908 12590 12414 12 14 12 13 11 12 2030500 13998 1395;3448 13491 32565;32566;32567;32568;32569;32570;32571;32572;32573;32574;32575 37845;37846;37847;37848;37849;37850;37851;37852;37853;37854;37855;37856;37857;37858;37859;37860 37854 469 16 LVINGKPITIFQER Unmodified 1626.9457 0.94572659 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W8;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 13 0 1 70.588 70.588 3 0.037039 26344 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.495 17.964 230.52 247.26 0 274.96 199.58 277.86 216 247 0 255 212 266 1 1 0 1 1 1 37866 13999 1395;3448 13491 32576 37861 37861 1 LVITEETAK Unmodified 1002.5597 0.55972651 3329 Q9WUA2;A0A087WS80;A0A087WPV4 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 6 0 1 57.21 57.21 2 0.0337 18756 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.916 17.489 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14000 3329 13492 32577 37862 37862 1 LVIVGDGACGK Unmodified 1087.5696 0.56957969 3254 Q9QUI0;A0A0A6YXF6;Q62159;H3BL56;A0A0G2JEP8;Q9CR99;A0A0A6YWJ1 Rhoa;Rhoc;4930544G11Rik Transforming protein RhoA;Rho-related GTP-binding protein RhoC yes no 0 0 0 0 10 2.16 1 1 1 60.134 60.134 2;3 3.2701E-10 17976 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.11 88.258 236.47 107.57 261.7 244.56 365.05 270.28 222 111 259 241 367 259 2 1 3 2 2 2 32526 14001 3254 13493 32578;32579;32580 37863;37864;37865 37864 3 LVKPGNQNTQVTEAWNK Unmodified 1925.9959 0.99592426 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 1 9.5 0.5 1 1 56.597 56.597 4 6.2276E-06 16312 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.615 56.122 79.08 172.36 0 80.096 139.05 77.692 74 167 0 74 139 74 1 2 0 1 2 1 13333 14002 1599 13494 32581;32582 37866;37867 37866 2 LVLASIDQADFQGFTYVNPDFVHPDAR Unmodified 3034.4825 0.48248583 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 10 2.16 1 1 1 89.625 89.625 4 3.3724E-06 32482 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.811 40.511 9.612 8.9279 19.246 29.457 28 29.848 9 9 19 28 28 28 1 1 1 1 1 1 11398 14003 1783 13495 32583;32584;32585 37868;37869;37870 37868 3 LVLCEVFK Unmodified 1006.5521 0.55213871 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 0 0 0 0 10.5 1.71 1 1 1 1 1 1 77.353 77.353 2 2.6616E-06 29388 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 162.97 95.21 1276.1 2117.6 1934.1 1746.1 1991.3 2723.3 1201 2093 1950 1720 2038 2608 6 7 8 7 6 10 795110 14004 1383 13496 32586;32587;32588;32589;32590;32591 37871;37872;37873;37874;37875;37876;37877;37878;37879;37880 37879 10 LVLDAALALQEYGCDVK Unmodified 1876.9604 0.96044996 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 0 7 0 1 96.74 96.74 3 0.035671 35598 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.366 11.903 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 864.83 14005 3121 13497 32592 37881 37881 1 LVLDAFALPLTNLFK Unmodified 1673.9756 0.97562974 3186 Q9ERK4;E9Q1T9;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 12.5 0.5 1 1 112.29 112.29 3 0.00041084 44583 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.394 41.861 9.612 8.9279 7.0083 29.093 0 7.462 9 9 7 27 0 7 1 1 1 2 0 1 2841.2 14006 3186 13498 32593;32594 37882;37883 37883 2 LVLELSGEMVR Unmodified 1244.6799 0.67985842 2754 Q91WD5;D3YXT0;A0A0A6YW30;A0A0A6YXD3 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 77.424 77.424 2 9.5897E-08 26786 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.93 80.806 129.15 34.734 85.836 27.73 96.004 0 121 37 83 28 93 0 2 1 2 1 2 0 8033.5 14007 2754 13499 32595;32596 37884;37885 37885 2 LVLEQVVTSIASVADTAEEK Unmodified 2101.1154 0.11543027 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 8 0 1 105.73 105.73 3 3.5276E-07 36577 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.396 55.263 7.511 0 0 0 0 7.462 7 0 0 0 0 7 1 0 0 0 0 1 892.79 14008 2422 13500 32597 37886 37886 1 LVLEVAQHLGESTVR Unmodified 1649.9101 0.91006937 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.62 1.73 1 1 2 2 1 1 73.055 73.055 2;3 2.2097E-29 24017 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 156 111.02 591.2 403.06 543.48 611.97 787.58 595.03 555 408 533 603 790 574 7 5 6 10 8 6 665820 14009 1642 13501 32598;32599;32600;32601;32602;32603;32604;32605 37887;37888;37889;37890;37891;37892;37893;37894;37895;37896;37897 37892 11 LVLFTSEHSHYSIK Unmodified 1659.8621 0.86205654 1578 P48318 Gad1 Glutamate decarboxylase 1 yes yes 0 0 0 0 11 0 1 59.108 59.108 4 0.0015831 15293 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.377 34.166 0 0 248.86 0 299.16 0 0 0 230 0 286 0 0 0 1 0 1 0 10034 14010 1578 13502 32606 37898 37898 1 LVLGDNSLAIR Deamidation (N) 1170.6608 0.66083754 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 1 0 0 9 2.94 1 1 1 71.586 71.586 2 1.7726E-06 24064 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.11 62.571 117.87 91.686 216.65 149.11 143.4 202.71 111 93 212 148 149 194 2 1 3 2 2 3 15281 14011 1311 13503 32607;32608;32609 37899;37900;37901 37900 374 3 LVLGDNSLAIR Unmodified 1169.6768 0.67682195 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 9.2 2.04 1 1 2 1 68.146 68.146 2;3 4.2159E-26 23151 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 185.6 127.43 400.85 591.43 550.35 627.87 687.54 871.56 377 588 555 610 698 836 3 5 4 5 4 5 413590 14012 1311 13503 32610;32611;32612;32613;32614 37902;37903;37904;37905;37906;37907 37902 6 LVLLELNFLPTTGTK Unmodified 1657.9655 0.96545898 1921 Q3TG45;Q9CPS5;Q9CX56 Psmd8 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 0 11.7 0.471 1 2 98.004 98.004 2;3 0.00020832 28009 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.864 49.164 0 58.956 37.595 28.363 0 78.884 0 56 37 28 0 74 0 2 1 1 0 2 14159 14013 1921 13504 32615;32616;32617 37908;37909;37910 37910 3 LVLLGESAVGK Unmodified 1084.6492 0.64921022 1514;2921;1683 Q9CQD1;A2A5F5;A2A5F6;P35278;Q8C266;P61021 Rab5a;Rab5c;Rab5b Ras-related protein Rab-5A;Ras-related protein Rab-5C;Ras-related protein Rab-5B no no 0 0 0 0 10.8 1.48 1 1 1 1 72.9 72.9 2;3 1.133E-33 21962 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 195.7 123.21 462.74 446.34 330.05 558.78 509.69 652.77 435 454 330 538 516 626 5 6 3 7 5 7 50174 14014 2921;1514;1683 13505 32618;32619;32620;32621 37911;37912;37913;37914;37915;37916;37917;37918 37912 8 LVLLNMPGPPR Unmodified 1205.6954 0.6954489 2727;2019 Q91V14;A0A076FR46;Q6P6P5;Q3V0N8;Q924N4 Slc12a5;Slc12a6 Solute carrier family 12 member 5;Solute carrier family 12 member 6 no no 0 0 0 0 4.67 5.19 2 1 75.069 75.069 2 8.4396E-10 25792 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.91 92.931 276.34 124.26 195.86 228.66 347.92 173.35 259 130 195 223 352 167 4 2 4 4 6 3 73666 14015 2727;2019 13506 32622;32623;32624 37919;37920;37921;37922;37923;37924 37920 6 LVLNCVGPYR Unmodified 1189.6278 0.62776327 2635 Q8R127;J3QNN5 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes no 0 0 0 0 10.5 0.5 1 1 62.019 62.019 2 0.0021456 16942 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.181 55.878 54.42 60.171 0 54.236 80.143 97 51 60 0 51 79 97 1 1 0 1 1 1 21810 14016 2635 13507 32625;32626 37925;37926 37925 2 LVLPMIK Unmodified 812.51938 0.51938202 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 12 0 1 76.144 76.144 3 0.010814 20282 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.592 15.631 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14017 2422 13508 32627 37927 37927 1 LVLTHFSQR Unmodified 1099.6138 0.61382777 2708 Q8VEB6 Elac1 Zinc phosphodiesterase ELAC protein 1 yes yes 0 0 0 0 12 0 1 49.997 49.997 3 0.010617 10171 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.084 25.746 78.794 47.92 61.648 0 69.35 82.235 74 51 60 0 69 79 1 1 1 0 1 1 3614.4 14018 2708 13509 32628 37928 37928 1 LVLVGDGGTGK Unmodified 1014.571 0.5709599 1744 P62827;Q14AA6 Ran;1700009N14Rik GTP-binding nuclear protein Ran yes no 0 0 0 0 10.6 2.06 1 1 1 2 61.263 61.263 2;3 1.8872E-14 18533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 160.36 66.713 950.08 325.5 906.91 852.4 678.38 775.88 892 346 887 841 698 746 6 4 5 6 4 5 105260 14019 1744 13510 32629;32630;32631;32632;32633 37929;37930;37931;37932;37933;37934 37930 6 LVLWDINK Unmodified 999.57532 0.57531699 3169 Q9EQ06;A8Y5N4;Q8VCR2 Hsd17b11;Hsd17b13 Estradiol 17-beta-dehydrogenase 11;17-beta-hydroxysteroid dehydrogenase 13 yes no 0 0 0 0 10 0 1 79.309 79.309 2 0.046031 24760 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.252 23.143 0 39.368 0 0 0 49.036 0 37 0 0 0 46 0 1 0 0 0 1 4084.9 14020 3169 13511 32634 37935 37935 1 LVLYLEHNLEK Unmodified 1369.7606 0.76055158 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 10 1.87 1 1 1 1 74.873 74.873 3 7.1799E-10 22545 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.69 71.292 305.76 223.23 179.68 319.51 225.45 240.88 287 232 185 306 232 232 3 3 2 3 2 2 68329 14021 859 13512 32635;32636;32637;32638 37936;37937;37938;37939 37938 4 LVMLYALHYER Unmodified 1406.738 0.738042 1849 P97390 Vps45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 0 12 0 1 71.287 71.287 3 0.0078986 18239 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.286 25.9 45.066 0 0 0 0 49.036 42 0 0 0 0 46 1 0 0 0 0 1 2748.7 14022 1849 13513 32639 37940 37940 1 LVNASVAFYK Unmodified 1110.6073 0.6073454 545;1894 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560;Q0KL02;A0A2I3BRP6 Kalrn;Trio Kalirin;Triple functional domain protein no no 0 0 0 0 10 0 1 68.869 68.869 3 0.060487 19974 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.616 6.7301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14023 545;1894 13514 32640 37941 37941 1 LVNECLAEELPHIHAFEQK Unmodified 2276.126 0.12595216 2385 Q8BGS2 Bola2 BolA-like protein 2 yes yes 0 0 0 0 9 4 1 1 71.223 71.223 4 0.00023011 26432 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.87 34.204 39.613 17.545 178.73 141.27 37.054 255.85 37 19 171 139 37 241 1 1 1 1 1 2 7842.9 14024 2385 13515 32641;32642 37942;37943 37942 2 LVNELTEFAK Unmodified 1162.6234 0.6233894 656 CON__P02769 yes yes 0 0 0 0 6.5 0.5 1 1 76.78 76.78 2;3 0.0015343 28123 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.721 35 0 8.4355 248.65 114.81 81.591 29.088 0 9 235 120 84 28 0 1 2 2 2 1 32075 + 14025 656 13516 32643;32644 37944;37945 37944 2 LVNGCALNFFR Deamidation (N) 1310.6441 0.64414162 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 1 0 0 10.7 1.7 1 1 1 80.965 80.965 2 7.1128E-13 31282 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 158.37 110.21 275.77 68.567 301.72 74.207 139.01 185.86 259 74 287 74 139 176 3 1 3 1 2 2 52731 14026 3145 13517 32645;32646;32647 37946;37947;37948 37948 1094 3 LVNGCALNFFR Unmodified 1309.6601 0.66012603 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 0 11 0.816 1 1 1 76.395 76.395 2 0.0013253 20337 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.308 42.99 70.177 73.242 45.589 27.887 122.93 173.45 66 74 46 28 120 166 2 2 1 1 1 3 22423 14027 3145 13517 32648;32649;32650 37949;37950;37951 37951 3 LVNILPYESSR Unmodified 1289.698 0.69795133 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 9 0 1 70.529 70.529 2 0.004547 22889 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.069 26.089 39.701 0 0 0 67.99 0 37 0 0 0 65 0 1 0 0 0 1 0 7901.9 14028 568 13518 32651 37952 37952 1 LVNLHLR Unmodified 863.53412 0.53412088 247 A0A1Y7VNT9;A0A1B0GRH4;A0A1B0GR60;Q9CPX4;P49945;P29391 Ftl1;Ftl2 Ferritin;Ferritin light chain 2;Ferritin light chain 1 yes no 0 0 0 0 10 0 1 51.027 51.027 3 0.0034483 12074 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.36 63.296 0 0 37.46 57.777 63.714 47.218 0 0 37 56 65 46 0 0 1 1 1 1 10433 14029 247 13519 32652 37953 37953 1 LVNLNVK Unmodified 798.49634 0.49633839 2780 Q91Z31;A0A0G2JGW0 Ptbp2 Polypyrimidine tract-binding protein 2 no no 0 0 0 0 10.5 0.5 1 1 61.13 61.13 2 0.01578 16082 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.75 41.717 99.789 145.15 163.99 378.12 354.9 307.54 93 139 167 361 366 298 1 1 1 2 2 2 24225 14030 2780 13520 32653;32654 37954;37955 37955 2 LVNQDADGIGEICLWGR Unmodified 1914.9258 0.92579578 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 7 0 1 80.829 80.829 3 0.00070639 29059 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.493 30.369 29.952 18.196 0 40.683 45.266 28.556 28 19 0 38 46 28 1 1 0 1 1 1 3099.2 14031 2890 13521 32655 37956 37956 1 LVNQEVLADPLVPPQLTIK Unmodified 2086.2038 0.20379177 2736 Q91VD9;A0A087WQ77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 9.33 2.75 1 1 1 1 2 88.391 88.391 3;4 4.4546E-08 34813 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.967 70.922 88.188 278.45 108.83 87.975 169.61 106.86 83 269 111 84 167 102 2 6 3 3 5 3 42355 14032 2736 13522 32656;32657;32658;32659;32660;32661 37957;37958;37959;37960;37961;37962;37963 37962 7 LVNTGLLTLR Unmodified 1098.6761 0.67609367 359 Q91YP2;A0A286YD12 Nln Neurolysin, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 71.92 71.92 2 0.0051295 20877 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.282 34.39 175.71 221.79 217.36 0 0 305.94 166 223 214 0 0 287 2 2 2 0 0 2 29357 14033 359 13523 32662;32663 37964;37965 37965 2 LVNTSGFNMSFLK Unmodified 1456.7384 0.73843593 33 A0A087WS83;Q61290;E9QK20;A0A1D5RLU3 Cacna1e Voltage-dependent R-type calcium channel subunit alpha-1E yes no 0 0 0 0 11 0 1 82.035 82.035 3 0.0094414 25568 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.774 24.538 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14034 33 13524 32664 37966 37966 1 LVPDMIPEVVSEQVSSYLSK Unmodified 2219.1395 0.13953653 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 9.2 2.04 1 1 2 1 103.46 103.46 3;4 2.6391E-13 36250 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.66 92.361 43.952 18.196 0 31.674 60.178 71.243 42 19 0 31 60 69 2 1 0 2 3 4 9534.6 14035 3038 13525 32665;32666;32667;32668;32669 37967;37968;37969;37970;37971;37972 37968 6 LVPDSDVR Unmodified 899.47125 0.47124585 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7 3.54 1 1 1 1 46.962 46.962 2 0.0038799 14459 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.92 67.759 0 183.69 291.33 183.75 206.76 221.16 0 176 287 186 213 213 0 2 3 2 2 2 91235 14036 1055 13526 32670;32671;32672;32673 37973;37974;37975;37976;37977 37975 5 LVPEAAEITASVK Unmodified 1326.7395 0.73948179 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 9.5 3.5 1 1 71.694 71.694 3 0.00017454 26679 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.412 45.62 68.862 64.822 93.447 66.053 92.587 48.248 65 65 93 65 93 46 2 1 2 1 2 1 14261 14037 3056 13527 32674;32675 37978;37979 37979 2 LVPELDTVVPLESSK Unmodified 1624.8924 0.89235362 2873 Q99MN9;E9Q1J7 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 6 0 1 82.824 82.824 3 3.2644E-05 30768 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.417 43.441 20.147 47.585 0 39.398 55.466 37.859 19 46 0 37 56 37 1 1 0 1 1 1 5032.2 14038 2873 13528 32676 37980 37980 1 LVPFDHAESTYGLYR Unmodified 1766.8628 0.86278482 2911 Q9CQ60;Q8CBG6;F6X8L5 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 7.5 0.5 1 1 65.369 65.369 3 0.00067939 21053 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.178 50.126 59.466 102.82 101.78 47.409 119.4 114.92 56 102 102 46 120 111 1 2 2 1 2 2 10062 14039 2911 13529 32677;32678 37981;37982 37982 2 LVPGGGATEIELAK Unmodified 1353.7504 0.75038083 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8.25 2.77 1 2 1 68.601 68.601 2;3 9.8524E-05 25036 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.288 51.4 197.62 98.822 245.35 0 207.84 161.43 186 103 232 0 204 157 4 3 3 0 3 3 55114 14040 1543 13530 32679;32680;32681;32682 37983;37984;37985;37986 37986 4 LVPGPELEEK Unmodified 1109.5968 0.5968403 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 0 5.5 0.5 1 1 62.702 62.702 2 0.0017318 21317 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.047 41.966 88.308 45.341 87.722 0 94.002 95.39 83 46 84 0 93 92 2 1 2 0 2 2 9590.5 14041 573 13531 32683;32684 37987;37988 37988 2 LVPGPVFGSK Unmodified 999.57532 0.57531699 3125 Q9DBH5 Lman2 Vesicular integral-membrane protein VIP36 yes yes 0 0 0 0 10 0 1 68.65 68.65 2 0.0071225 19841 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.908 29.334 69.399 0 58.21 45.607 63.907 57.872 65 0 56 46 65 56 1 0 1 1 1 1 4193 14042 3125 13532 32685 37989 37989 1 LVPGWTKPITIGR Unmodified 1436.8504 0.85036964 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 1 6.5 5.5 1 1 69.035 69.035 3 3.3104E-11 17318 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 122.52 93.893 657.34 483.92 740.27 314.18 634.88 669.45 619 498 727 304 630 645 3 2 3 2 2 3 128780 14043 1618 13533 32686;32687 37990;37991;37992 37992 3 LVPHQMAH Unmodified 931.46981 0.46980607 1417 Q9D881;P19536 Cox5b Cytochrome c oxidase subunit 5B, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 36.349 36.349 3 0.0027598 7578 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.086 66.3 196.42 181.38 195.87 72.799 234.65 105.62 185 186 195 74 231 102 2 2 2 1 2 1 47518 14044 1417 13534 32688;32689 37993;37994 37994 2 LVPLKETIK Unmodified 1039.6641 0.664132 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 11.5 1.12 1 1 1 1 60.305 60.305 3 0.0026558 16535 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.258 47.257 3052.3 2539.4 3683.7 2172.4 2882.8 2423.3 2877 2638 3649 2238 2931 2333 3 3 3 3 3 2 703370 14045 1642 13535 32690;32691;32692;32693 37995;37996;37997;37998 37995 4 LVPLLDTGDIIIDGGNSEYR Unmodified 2159.111 0.1110136 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 6.5 0.5 1 1 91.597 91.597 3 0.00021644 33946 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.397 40.645 0 0 0 0 9 5 0 0 0 0 9 5 0 0 0 0 1 1 8695.3 14046 3142 13536 32694;32695 37999;38000 38000 2 LVPMTVFHK Unmodified 1070.5947 0.59467223 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 12 0 1 64.964 64.964 3 0.0023907 15857 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.643 42.389 149.15 0 74 121.32 0 148.17 139 0 74 111 0 139 1 0 1 1 0 1 13197 14047 2490 13537 32696 38001;38002 38001 2 LVPPFKPQVTSETDTR Unmodified 1813.9574 0.95741349 3330 Q9WUA6 Akt3 RAC-gamma serine/threonine-protein kinase yes yes 0 0 0 1 9.5 0.5 1 1 61.105 61.105 3 0.0066445 18443 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.369 30.569 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14048 3330 13538 32697;32698 38003;38004 38003 2 LVPQLVR Unmodified 823.52797 0.52797287 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 10 0 1 59.429 59.429 2 0.027374 15857 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.885 40.363 0 58.03 92.971 93.693 128.4 95.474 0 56 93 93 130 93 0 1 1 1 1 1 11879 14049 1436 13539 32699 38005 38005 1 LVPQVYFPEQIHDVIR Unmodified 1952.052 0.051982576 2427 Q8BLF1 Nceh1 Neutral cholesterol ester hydrolase 1 yes yes 0 0 0 0 7.5 0.5 1 1 77.11 77.11 3 1.1985E-08 26630 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.54 62.006 20.346 8.2041 0 0 19.874 0 19 9 0 0 19 0 1 1 0 0 1 0 2770.1 14050 2427 13540 32700;32701 38006;38007 38007 2 LVPSSYSAAVASLR Unmodified 1419.7722 0.7721789 928 F7AAP4;E9Q828 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 9 0 1 69.133 69.133 2 0.037062 22276 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.357 8.976 0 58.517 63.824 67.241 0 0 0 56 65 65 0 0 0 1 1 1 0 0 8961.2 14051 928 13541 32702 38008 38008 1 LVPVGYGIK Unmodified 944.5695 0.56950333 1247 O70251;A0A087WS46 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 0 11.6 1.02 1 1 2 1 66.984 66.984 2;3 3.2241E-05 18549 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.92 56.54 560.92 772.41 1114.3 666.89 1056 731.21 530 779 1100 675 1060 703 4 7 6 5 6 4 191230 14052 1247 13542 32703;32704;32705;32706;32707 38009;38010;38011;38012;38013;38014;38015;38016 38012 8 LVPVGYGIR Unmodified 972.57565 0.57565135 203 A0A0R4J1E2;E9QN08;Q80T06;F6ZFU0;P57776;A0A0R4J1L2;Q91VK2;D3YY68 Eef1d Elongation factor 1-delta yes no 0 0 0 0 10.5 0.5 1 1 62.124 62.124 2 5.2489E-05 16982 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.95 85.165 0 98.952 87.366 143.74 158.67 0 0 93 83 139 158 0 0 1 1 2 2 0 55909 14053 203 13543 32708;32709 38017;38018 38017 2 LVQAFQFTDK Unmodified 1195.6237 0.62372375 604 B1AXW5;B1AXW6;P35700 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 10 1.51 1 2 2 1 1 73.045 73.045 2;3 7.6688E-06 22084 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.01 74.978 231.12 236.48 371.73 362.41 627.69 273.99 217 232 360 352 625 264 3 5 4 5 8 4 339210 14054 604 13544 32710;32711;32712;32713;32714;32715;32716 38019;38020;38021;38022;38023;38024;38025;38026 38024 8 LVQDAYLSRPGQALAK Unmodified 1728.9523 0.95226853 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 1 9 0 1 59.95 59.95 3 0.018626 17861 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.412 28.535 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14055 1802 13545 32717 38027 38027 1 LVQDVANNTNEEAGDGTTTATVLAR Unmodified 2559.2413 0.2412525 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 5.12 3.06 2 3 2 1 64.259 64.259 3;4 7.1505E-74 22821 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 167.88 148.16 165.52 146.61 19.166 195.89 42.573 157.13 155 147 19 181 43 149 4 4 1 4 2 4 129110 14056 1766 13546 32718;32719;32720;32721;32722;32723;32724;32725 38028;38029;38030;38031;38032;38033;38034;38035;38036 38031 9 LVQDVANNTNEEAGDGTTTATVLAR Deamidation (N) 2560.2253 0.22526809 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 1 0 0 3 0 1 66.036 66.036 3 0.0032248 24077 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.819 31.289 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 3058.7 14057 1766 13546 32726 38037 38037 697 1 LVQDYGLESEVAQHLAK Unmodified 1898.9738 0.97379183 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8.67 3.09 1 1 1 71.945 71.945 3;4 1.7423E-08 25741 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.24 91.105 69.262 86.299 49.573 100.69 50.962 87.024 65 83 46 93 56 83 2 2 1 1 1 1 36828 14058 2179 13547 32727;32728;32729 38038;38039;38040 38038 3 LVQEQGSHSK Unmodified 1111.5622 0.56218613 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 5.5 0.5 1 1 33.901 33.901 3 0.00097907 7626 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.655 40.696 39.701 0 30.296 39.805 91.109 126.39 37 0 28 37 93 121 1 0 1 1 2 2 8323.1 14059 1974 13548 32730;32731 38041;38042 38042 2 LVQEVTDFAK Unmodified 1148.6077 0.60773933 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 72.084 72.084 2;3 1.5922E-08 26730 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.32 80.424 461.46 588.13 486.35 361.72 321.79 281.87 435 584 495 363 319 269 4 4 4 5 3 2 102300 14060 1321 13549 32732;32733;32734;32735;32736 38043;38044;38045;38046;38047 38047 5 LVQIASR Unmodified 785.47594 0.4759373 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 9 0 1 48.501 48.501 2 0.026481 12384 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.375 39.081 168.95 116.29 0 128.54 139.49 0 158 120 0 120 139 0 1 1 0 1 1 0 25436 14061 1873 13550 32737 38048 38048 1 LVQIEYALAAVAGGAPSVGIK Unmodified 2026.1463 0.14627689 1589 P49722 Psma2 Proteasome subunit alpha type-2 yes yes 0 0 0 0 9.5 3.95 1 2 1 1 1 101.23 101.23 3;4 2.1065E-11 32955 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.28 77.807 96.359 23 61.491 9.837 113.57 80.304 90 23 57 9 111 77 4 1 4 1 6 4 48652 14062 1589 13551 32738;32739;32740;32741;32742;32743 38049;38050;38051;38052;38053;38054;38055;38056;38057 38052 9 LVQIHIPR Unmodified 974.60253 0.6025348 1434 P22599 Serpina1b Alpha-1-antitrypsin 1-2 yes yes 0 0 0 0 10 0 1 54.551 54.551 3 0.0042427 13514 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.282 37.014 0 20.073 8.5336 0 28.62 19.437 0 19 9 0 28 19 0 1 1 0 1 1 6369.7 14063 1434 13552 32744 38058 38058 1 LVQLILHEYK Unmodified 1254.7336 0.73360855 3264 Q9QXB9 Drg2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 0 11 0 1 76.951 76.951 3 0.0012402 23155 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.067 38.688 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 8738.7 14064 3264 13553 32745 38059 38059 1 LVQLLVK Unmodified 811.55312 0.55312499 1879 Q02257 Jup Junction plakoglobin yes yes 0 0 0 0 6.5 5.5 1 1 75.079 75.079 2 0.033339 19688 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.614 32.648 78.672 42.187 242.12 109.92 209.79 231.73 74 46 231 111 213 223 1 1 2 1 2 2 13601 14065 1879 13554 32746;32747 38060;38061 38061 2 LVQLLVR Unmodified 839.55927 0.559273 1878 Q02248;E9Q6A9;F7BAC9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 8 4.97 1 1 1 70.366 70.366 2 0.012359 23934 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 118.01 36.63 202.54 132.39 226.82 231.04 189.08 240.85 190 139 222 227 195 231 2 2 2 3 2 3 126340 14066 1878 13555 32748;32749;32750 38062;38063;38064 38062 3 LVQMSICSSLAR Unmodified 1363.6952 0.69519091 255;3362 A0A1B0GRV0;D3Z5X0;Q9Z0S1 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 11 0.816 1 1 1 66.705 66.705 2 1.3192E-11 16543 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.65 80.586 94.021 34.819 14.783 24.499 45.271 19.599 91 36 15 24 45 19 3 2 1 2 2 1 15707 14067 255;3362 13556 32751;32752;32753 38065;38066;38067 38067 3 LVQNCLWTLR Unmodified 1301.6914 0.69142616 1878;1879 Q02248;E9Q6A9;Q02257 Ctnnb1;Jup Catenin beta-1;Junction plakoglobin no no 0 0 0 0 11.3 1.25 1 1 1 71.796 71.796 2 0.0028657 21408 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.054 46.99 69.226 72.949 66.954 35.62 102.72 68.03 65 74 65 37 102 65 1 2 1 1 2 1 33928 14068 1878;1879 13557 32754;32755;32756 38068;38069;38070 38068 3 LVQQPQNASTFINRPALGILPPENFVDK Unmodified 3105.6611 0.66111889 1702 P61922;Q3TUE8;F7C9G3;F6RN86 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 1 8.5 0.5 1 1 80.342 80.342 4 2.0102E-12 28131 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.778 61.683 49.65 55.651 115.96 62.935 121.34 105.27 47 56 111 65 121 102 2 3 2 2 2 2 17858 14069 1702 13558 32757;32758 38071;38072;38073;38074 38071 4 LVQSPNSYFMDVK Unmodified 1526.7439 0.74391524 85 A0A0G2JDW7;A0A0G2JG29;Q6ZWU9;D6RH49;D3YYB0;Q6ZWY3 Rps27;Rps27l 40S ribosomal protein S27;40S ribosomal protein S27-like yes no 0 0 0 0 8 0 1 73.164 73.164 3 0.028688 24853 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.509 18.669 49.273 16.894 0 0 46.807 38.106 46 19 0 0 46 37 1 1 0 0 1 1 4703.3 14070 85 13559 32759 38075 38075 1 LVQTAELTK Unmodified 1001.5757 0.57571092 2930 Q9CQI3;A0A2I3BR94;A0A2I3BPS1;D3Z2F6;D3YY16;Q9ERL7 Gmfb;Gmfg Glia maturation factor beta;Glia maturation factor gamma yes no 0 0 0 0 9.33 2.62 1 1 1 57.918 57.918 2;3 0.00079918 17642 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.78 60.232 406.92 264.59 93.622 295.12 415.88 440.12 381 269 93 280 425 424 3 2 1 2 3 3 46644 14071 2930 13560 32760;32761;32762 38076;38077;38078 38077 3 LVRPPVQVYGIEGR Unmodified 1581.8991 0.89911075 3110 Q9DB20;A0A338P776;F6XVM5 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 1 10.2 1.72 1 1 1 1 1 58.731 58.731 3 1.9639E-16 15456 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.96 103.53 1089.4 554.69 1643.3 1346.7 742.59 1339.3 1025 566 1610 1329 759 1274 5 3 6 5 3 4 351240 14072 3110 13561 32763;32764;32765;32766;32767 38079;38080;38081;38082;38083;38084 38082 6 LVSDGNINSDR Unmodified 1188.5735 0.57347909 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7 3.54 1 1 1 1 43.94 43.94 2;3 3.2982E-20 13437 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 175.33 129.35 226.77 62.615 450.36 345.91 114.1 204.61 213 65 435 343 121 195 3 1 4 4 2 3 48471 14073 2148 13562 32768;32769;32770;32771 38085;38086;38087;38088 38085 4 LVSDGNINSDR Deamidation (N) 1189.5575 0.55749468 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 4 0 1 46.92 46.92 2 6.7414E-07 14809 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.3 72.895 0 59.584 0 29.902 37.328 0 0 56 0 28 37 0 0 1 0 1 1 0 4556.4 14074 2148 13562 32772 38089 38089 842 1 LVSDVQTAVK Unmodified 1058.5972 0.59717465 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 9.33 2.62 1 1 1 58.705 58.705 2;3 1.0985E-05 18074 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.94 64.319 276.28 172.51 127.5 123.56 141.8 252.86 259 176 130 120 139 241 3 2 1 1 1 3 22964 14075 859 13563 32773;32774;32775 38090;38091;38092 38091 3 LVSEFPYIEAEVK Unmodified 1522.7919 0.79191129 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 7.75 3.11 1 1 1 1 81.69 81.69 2;3 1.1012E-11 30232 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.39 88.983 158.9 29.18 201.3 160.3 123.95 175.27 149 28 195 157 130 167 3 1 4 3 3 3 30837 14076 2179 13564 32776;32777;32778;32779 38093;38094;38095;38096 38094 4 LVSEGCQK Unmodified 919.44332 0.44331654 3415 yes yes 0 0 0 0 6 0 1 54.298 54.298 3 0.050034 17400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.124 5.4779 88.267 71.573 72.449 64.654 110.21 85.333 83 74 74 65 111 83 1 1 1 1 1 1 2905.8 + 14077 3415 13565 32780 38097 38097 1 LVSELWDAGIK Unmodified 1229.6656 0.66558856 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7.5 0.5 1 1 82.594 82.594 2 1.0662E-05 29170 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.4 59.395 29.677 37.647 46.9 37.646 28.62 19.437 28 38 46 37 28 19 1 2 1 1 1 1 4602.8 14078 2105 13566 32781;32782 38098;38099 38099 2 LVSEYMSK Unmodified 955.46847 0.46846866 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 8.5 0.5 1 1 60.17 60.17 2 0.0068025 18692 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.666 37.817 48.505 83.833 72.259 56.901 0 88.478 46 83 74 56 0 83 1 1 1 1 0 1 4936.4 14079 1474 13567 32783;32784 38100;38101 38100 2 LVSFLEAK Unmodified 905.52222 0.52221879 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 9.5 0.5 1 1 76.177 76.177 2 0.014959 25509 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.476 42.496 49.017 0 125.2 122.87 102.2 96.222 46 0 121 121 102 93 1 0 2 2 1 2 6912.1 14080 1083 13568 32785;32786 38102;38103 38102 2 LVSHFVEEFK Unmodified 1233.6394 0.63937381 1407;1394 Q61696;P17879;P16627 Hspa1a;Hspa1b;Hspa1l Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 13 0 1 68.361 68.361 3 0.0052185 25221 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.592 41.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14081 1407;1394 13569 32787 38104 38104 1 LVSHFVEEFKR Unmodified 1389.7405 0.74048484 1407;1394 Q61696;P17879;P16627 Hspa1a;Hspa1b;Hspa1l Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 1 9.5 0.5 1 1 63.763 63.763 4 0.0042431 19694 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.401 41.947 187.05 88.652 227.49 144.91 175.47 57.359 176 93 222 148 176 56 2 1 2 2 2 1 11644 14082 1407;1394 13570 32788;32789 38105;38106 38105 2 LVSIGAEEIVDGNVK Unmodified 1541.8301 0.83008771 418;3209 A1BN54;Q7TPR4;Q9JI91 Actn1;Actn2 Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 0 5.5 0.5 1 1 74.77 74.77 3 0.00029664 27569 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.285 27.651 89.594 39.782 129.3 20.767 66.371 86.584 84 38 121 19 65 83 2 2 3 1 1 2 8942.9 14083 418;3209 13571 32790;32791 38107;38108;38109;38110 38107 4 LVSIPELLSAIK Unmodified 1281.7908 0.79078908 605 E9PV45;B1AY13 Usp24 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 24 yes no 0 0 0 0 12 0 1 98.334 98.334 3 0.022286 28089 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.031 22.192 0 29.666 7.5399 9.3876 0 9.594 0 28 9 9 0 9 0 1 1 1 0 1 965.34 14084 605 13572 32792 38111 38111 1 LVSIVAEQLEK Unmodified 1227.7075 0.70745338 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 7.5 0.5 1 1 80.587 80.587 3 0.0015024 29014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.344 37.968 29.807 106.52 0 20.767 0 20.254 28 102 0 19 0 19 1 2 0 1 0 1 5557.1 14085 2543 13573 32793;32794 38112;38113 38112 2 LVSLIGSK Unmodified 815.51165 0.5116541 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 8 4.97 1 1 1 68.447 68.447 2 0.0013088 23352 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.01 42.559 475.81 195.34 390.96 329.61 421.07 833.32 445 203 382 326 423 793 3 2 2 2 2 4 216210 14086 3313 13574 32795;32796;32797 38114;38115;38116;38117 38114 4 LVSLYFDTK Unmodified 1084.5805 0.58046195 2369 Q8BG32;G3UZ33 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 10 0.816 1 1 1 77.13 77.13 2;3 0.0029112 23745 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.755 33.864 29.622 26.992 48.003 0 48.116 0 28 28 46 0 46 0 1 1 1 0 1 0 2319.5 14087 2369 13575 32798;32799;32800 38118;38119;38120 38119 3 LVSPEPPPK Unmodified 962.54368 0.54368251 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 7 0.816 1 1 1 57.209 57.209 2 0.0024189 16401 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.099 35.299 139.03 82.845 111.22 183.58 114.9 203.53 130 84 112 176 120 194 2 2 2 3 2 3 26895 14088 526 13576 32801;32802;32803 38121;38122;38123 38121 3 LVSPEQPPK Unmodified 993.5495 0.54949617 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 9.5 3.5 1 1 49.693 49.693 2 0.011165 16005 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.897 38.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14089 1250 13577 32804;32805 38124;38125 38125 2 LVSQDNFGFDLPAVEAATK Unmodified 2021.0106 0.010571271 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.2 2.48 1 2 1 1 86.101 86.101 3;4 4.8706E-10 30871 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.41 80.38 119.06 112.79 162.05 163.46 92.253 116.76 112 112 158 158 93 112 4 4 4 5 2 3 83688 14090 2148 13578 32806;32807;32808;32809;32810 38126;38127;38128;38129;38130;38131;38132 38131 7 LVSQDNFGFDLPAVEAATK Deamidation (N) 2021.9946 0.99458686 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 13 0 1 86.278 86.278 3 9.5753E-07 33727 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.657 57.973 49.128 45.631 0 89.518 63.878 0 46 46 0 83 65 0 1 1 0 1 1 0 33858 14091 2148 13578 32811 38133 38133 843 1 LVSQDNFGLELAAVEAAVR Unmodified 2001.0531 0.053104788 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 92.668 92.668 3 1.4245E-07 35185 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.859 73.72 39.586 42.417 86.645 68.857 88.885 20.254 37 42 84 69 88 19 3 3 3 3 4 1 26267 14092 2186 13579 32812;32813;32814;32815 38134;38135;38136;38137;38138;38139 38137 6 LVSSPCCIVTSTYGWTANMER Unmodified 2431.097 0.097036567 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 79.83 79.83 3 2.1065E-11 24987 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.28 87.434 81.251 75.111 19.132 79.275 168.11 125.27 76 74 19 75 169 121 3 5 1 2 5 5 66156 14093 1354 13580 32816;32817;32818;32819;32820 38140;38141;38142;38143;38144;38145;38146 38144 7 LVSSPEVGHDEFSTQALAR Unmodified 2042.0069 0.006882877 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 1 1 1 58.996 58.996 3 6.8674E-14 19625 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.26 100.86 0 29.792 0 0 48.184 56.473 0 28 0 0 47 56 0 1 0 0 1 2 10975 14094 2186 13581 32821;32822 38147;38148 38148 2 LVSSPQTIMELFFQEVAR Unmodified 2094.082 0.081962076 3366 Q9Z0W3 Nup160 Nuclear pore complex protein Nup160 yes yes 0 0 0 0 11 0 1 109.99 109.99 3 0.00062718 35777 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.733 22.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14095 3366 13582 32823 38149 38149 1 LVSTLISK Unmodified 859.53787 0.53786886 957 E9QKZ2;Q91YE6 Ipo9 Importin-9 yes no 0 0 0 0 11 0 1 67.722 67.722 2 0.010857 19016 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.442 51.593 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14096 957 13583 32824 38150 38150 1 LVSVLQNK Unmodified 899.54402 0.54401687 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11 0.816 1 1 1 62.994 62.994 2 0.00046591 16828 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 152.47 96.349 269.68 102.11 214.88 181.88 167.38 202.03 253 111 213 181 168 194 2 1 2 2 1 2 65593 14097 2382 13584 32825;32826;32827 38151;38152;38153 38152 3 LVTDLTK Unmodified 788.46437 0.46436956 656;655 CON__P02769;CON__P02768-1 no no 0 0 0 0 8 1 1 1 59.992 59.992 2 0.02833 17877 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.616 17.618 215.83 54.127 468.98 207.85 131.67 243.55 204 60 446 218 143 232 2 1 2 2 2 2 25281 + 14098 656;655 13585 32828;32829 38154;38155 38155 2 LVTEPAEIMA Unmodified 1072.5474 0.54744726 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 4.5 0.5 1 1 76.709 76.709 2 0.0040783 28448 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.116 55.559 0 19.892 49.661 0 67.99 0 0 19 47 0 65 0 0 1 2 0 2 0 11471 14099 2996 13586 32830;32831 38156;38157 38156 2 LVTFESVAVPLQQGAEQQR Unmodified 2099.1011 0.10111761 2001 Q3UPL0;S4R2A9 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 10 2.16 1 1 1 76.733 76.733 3 8.0838E-06 29236 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.606 46.51 29.856 66.181 57.78 39.747 84.992 0 28 65 55 37 83 0 1 2 1 1 2 0 9874.8 14100 2001 13587 32832;32833;32834 38158;38159;38160 38160 3 LVTFLQHQQR Unmodified 1268.699 0.69895438 1094 Q8R3B1;G5DDB7;Q05DG3 Plcd1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1;Phosphoinositide phospholipase C yes no 0 0 0 0 12 0 1 55.22 55.22 3 0.00096488 12289 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.85 59.483 0 40.432 0 44.876 54.738 51.738 0 38 0 42 56 50 0 1 0 1 1 1 6516.1 14101 1094 13588 32835 38161 38161 1 LVTIGSGK Unmodified 773.4647 0.46470391 1089 G3X9V4;Q01097;Q01098;Q03391 Grin2b;Grin2c;Grin2d Glutamate receptor ionotropic, NMDA 2B;Glutamate receptor ionotropic, NMDA 2C;Glutamate receptor ionotropic, NMDA 2D yes no 0 0 0 0 11 0 1 54.546 54.546 2 0.034782 13384 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.825 23.399 59.91 35.328 0 0 0 39.442 56 37 0 0 0 37 1 1 0 0 0 1 4625.1 14102 1089 13589 32836 38162 38162 1 LVTLEEFLASTQR Unmodified 1505.809 0.80895834 267 A0A1C7CYU3;Q02819;A0A1B0GR41 Nucb1 Nucleobindin-1 yes no 0 0 0 0 9 0.816 1 1 1 91.309 91.309 3 0.00013409 32291 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.466 60.039 3.1418 0 12.968 0 0 0 3 0 12 0 0 0 1 0 1 0 0 0 3906.5 14103 267 13590 32837;32838;32839 38163;38164;38165 38164 3 LVTLPVSFAQLK Unmodified 1314.7911 0.79112343 2809 Q922Q8 Lrrc59 Leucine-rich repeat-containing protein 59 yes yes 0 0 0 0 6.5 5.5 1 1 86.478 86.478 3 0.00015609 30806 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.979 61.708 29.904 66.378 45.776 67.994 17.145 98.649 28 65 46 65 19 93 1 2 1 2 1 2 12065 14104 2809 13591 32840;32841 38166;38167 38166 2 LVTLSATVTELEEDLGTAR Unmodified 2017.0579 0.057915395 17 B8QI36;A0A087WPM2 Ppfia4 yes no 0 0 0 0 6 0 1 99.047 99.047 3 0.0020808 36998 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.711 27.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 962.06 14105 17 13592 32842 38168 38168 1 LVTPEDDEPDEPK Unmodified 1482.6726 0.67258402 279 A0A1D5RLY2;Q80WQ2 Vac14 Protein VAC14 homolog yes no 0 0 0 0 3.5 0.5 1 1 54.906 54.906 3 0.00070659 18899 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.65 32.588 30.044 69.16 0 49.243 55.013 97.568 28 65 0 46 56 93 1 1 0 1 1 2 8924.6 14106 279 13593 32843;32844 38169;38170 38169 2 LVTPHGESEQIGVIPSK Unmodified 1789.9574 0.95741349 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 0 7 0 1 58.709 58.709 4 0.00023147 18681 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.169 34.757 39.366 66.506 0 69.649 74.205 0 37 65 0 65 74 0 1 1 0 1 1 0 2476 14107 538 13594 32845 38171 38171 1 LVTQDNFGYDLAAVEAAK Unmodified 1923.9578 0.95780742 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 8.67 3.09 1 1 1 81.691 81.691 3 1.8269E-07 31591 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.482 57.428 78.731 35.601 134.34 84.936 64.911 87.692 74 37 130 84 65 84 2 2 3 2 1 3 9133.5 14108 893 13595 32846;32847;32848 38172;38173;38174 38174 3 LVTSDPEINTK Unmodified 1215.6347 0.63468237 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 6 0 2 55.583 55.583 2;3 2.7649E-08 18016 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.91 90.819 0 39.368 105.37 132.8 160.12 0 0 37 102 130 158 0 0 1 1 2 1 0 10682 14109 1207 13596 32849;32850 38175;38176 38176 2 LVTSGPWLEVAPITLSDVSIIPESAHADGR Unmodified 3129.6346 0.63462937 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 8 0 1 95.355 95.355 4 0.015155 34430 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 28.46 21.662 0 9.576 0 9.7905 2.471 6.3255 0 9 0 9 3 6 0 1 0 1 1 1 890.48 14110 2323 13597 32851 38177 38177 1 LVTSIGDVVNHDPVVGDR Unmodified 1890.9799 0.97993984 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 5.5 0.5 1 1 67.871 67.871 3 4.4778E-57 23753 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 171.71 155.35 127.94 118.46 99.158 77.53 101.51 47.142 120 121 102 74 102 46 1 2 2 1 2 1 50780 14111 2555 13598 32852;32853 38178;38179 38179 2 LVTSPCCIVTSTYGWTANMER Unmodified 2445.1127 0.11268663 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10.6 1.85 1 1 1 1 1 81.306 81.306 3 1.8084E-11 28655 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.752 72.362 29.952 58.311 68.544 37.581 48.116 9.594 28 57 66 37 46 9 1 3 3 2 1 1 64743 14112 1322 13599 32854;32855;32856;32857;32858 38180;38181;38182;38183;38184;38185 38180 6 LVTSSQAR Unmodified 860.47158 0.4715802 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 8 0 1 33.876 33.876 2 0.0061549 6565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.12 58.784 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 2291.5 14113 305 13600 32859 38186 38186 1 LVTTVTEIAG Unmodified 1002.5597 0.55972651 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 77.262 77.262 2 2.1065E-07 28345 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 140.53 91.18 228.8 139.23 66.101 186.63 259.7 125.83 214 139 65 176 259 120 4 3 2 4 5 3 90184 14114 1536 13601 32860;32861;32862;32863;32864 38187;38188;38189;38190;38191;38192 38189 6 LVTVWSAPNYCYR Unmodified 1627.7817 0.78169773 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 11.5 0.5 1 1 71.768 71.768 2 5.6279E-19 20862 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.22 117.99 24.462 43.039 0 20.767 28 0 23 42 0 19 28 0 1 1 0 1 1 0 11160 14115 134 13602 32865;32866 38193;38194 38193 2 LVVADTR Unmodified 772.4443 0.44430282 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 9.5 3.5 1 1 43.883 43.883 2 0.027046 12638 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.643 41.841 177.55 532.76 638.34 526.34 501.7 601.83 167 522 642 525 507 578 1 2 2 2 1 2 58468 14116 1876 13603 32867;32868 38195;38196 38195 2 LVVENVDVLTQMR Unmodified 1514.8127 0.81266351 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 7 0.816 1 1 1 77.037 77.037 3 0.0038243 27218 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.135 32.823 0 0 0 40.102 37.032 0 0 0 0 37 38 0 0 0 0 1 2 0 4400.3 14117 513 13604 32869;32870;32871 38197;38198;38199 38198 3 LVVFPTDDISLK Unmodified 1345.7493 0.74931819 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;B7ZCD3 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 8 0.816 1 1 1 83.474 83.474 2;3 8.9699E-12 28835 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.26 89.029 59.353 76.141 84.293 104.38 110.65 19.204 56 74 83 102 111 19 2 2 2 3 3 1 7574.6 14118 456 13605 32872;32873;32874 38200;38201;38202 38202 3 LVVGALHGK Unmodified 892.54944 0.54943659 189 A0A0R4J0U7;Q8R395 Commd5 COMM domain-containing protein 5 yes no 0 0 0 0 11 0 1 50.124 50.124 3 0.00068793 11720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.548 47.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14119 189 13606 32875 38203 38203 1 LVVGDGR Unmodified 714.40244 0.40243801 808 F7D432;E9PWE0;E0CYV0;P23506;F6V9F1 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 7 0 1 42.74 42.74 2 0.0254 11112 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 100.67 26.48 167.55 187.96 173.68 128.28 183.72 204.76 158 190 177 130 188 197 1 1 1 1 1 1 24838 14120 808 13607 32876 38204 38204 1 LVVLDEELEGVSPDELKDELPER Unmodified 2622.3276 0.32760789 2930 Q9CQI3;A0A2I3BR94;A0A2I3BPS1 Gmfb Glia maturation factor beta yes no 0 0 0 1 7.33 4.03 1 1 1 85.294 85.294 4 7.1286E-16 32443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.831 80.863 119.86 38.006 20.407 49.085 121 96.521 112 37 19 46 121 93 3 1 1 1 3 2 38349 14121 2930 13608 32877;32878;32879 38205;38206;38207 38205 3 LVVLDYIIR Unmodified 1102.675 0.67503104 1908 Q2TBE6 Pi4k2a Phosphatidylinositol 4-kinase type 2-alpha yes yes 0 0 0 0 11 0 1 88.053 88.053 2 0.039234 28044 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.23 26.941 0 33.437 36.567 32.797 0 0 0 32 37 32 0 0 0 1 1 1 0 0 4495 14122 1908 13609 32880 38208 38208 1 LVVLGSGGVGK Unmodified 984.59678 0.59678072 79 A0A0G2JDL9;Q99JI6;P62835;A0A0G2JE52;A0A0G2JED9 Rap1b;Rap1a Ras-related protein Rap-1b;Ras-related protein Rap-1A yes no 0 0 0 0 9.67 3.99 1 1 2 1 1 64.143 64.143 2;3 3.3204E-16 17430 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 166.16 107.18 386.41 101.25 394.17 406.48 662.73 414.56 361 99 370 385 655 399 6 2 4 6 4 4 180400 14123 79 13610 32881;32882;32883;32884;32885;32886 38209;38210;38211;38212;38213;38214;38215;38216 38213 8 LVVLPFPGK Unmodified 968.60589 0.60588884 2260 Q6YJU1;Q9QXC1 Fetub Fetuin-B yes no 0 0 0 0 12 0 1 79.897 79.897 2 0.0059168 21667 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.958 35.392 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 1849.7 14124 2260 13611 32887 38217 38217 1 LVVNDGK Unmodified 743.41775 0.41775372 3033 Q9D0S9 Hint2 Histidine triad nucleotide-binding protein 2, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 48.295 48.295 2 0.026927 13720 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.046 24.483 123.59 174.67 0 185.71 121.66 78.884 116 172 0 172 120 74 2 2 0 2 1 1 10692 14125 3033 13612 32888;32889 38218;38219 38218 2 LVVPASQCGSLIGK Unmodified 1427.7806 0.7806351 394;1647 Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6L5;A0A2R8VI12;A0A2R8VHY9;A0A2R8VI71;A0A2R8VHZ0;A0A2R8VHN3;A0A2R8VJY1;A0A2R8VKN0;A0A2R8VI73;A0A2R8W6U6;A0A2R8VKF0;A0A2R8VHG2;A0A2R8VHL8;A0A2R8VI15;P57722;E9Q7D8 Pcbp2;Pcbp3 Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 0 9.8 0.748 2 2 1 67.33 67.33 2;3 7.0009E-31 19253 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.31 84.15 69.745 175.05 157.91 219.62 316.85 171.95 65 167 158 215 316 167 1 2 1 3 2 1 73658 14126 394;1647 13613 32890;32891;32892;32893;32894 38220;38221;38222;38223;38224 38223 5 LVVPATQCGSLIGK Unmodified 1441.7963 0.79628516 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 11.3 1.25 1 1 1 68.524 68.524 3 8.8948E-05 19833 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.45 16.193 296.93 111.84 133.93 211.94 161.97 185.68 278 121 130 204 167 176 3 2 1 2 2 2 89076 14127 1668 13614 32895;32896;32897 38225;38226;38227 38225 3 LVVPCHK Unmodified 851.46874 0.46874343 1535 P39688 Fyn Tyrosine-protein kinase Fyn yes yes 0 0 0 0 9.5 0.5 1 1 44.583 44.583 3 0.024771 9612 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.961 25.081 0 245.78 0 218.94 214.24 230.54 0 231 0 204 222 222 0 2 0 2 2 2 6465.4 14128 1535 13615 32898;32899 38228;38229 38229 2 LVVPGAK Unmodified 682.43776 0.43776088 3420 yes no 0 0 0 0 10 0 1 38.244 38.244 3 0.036402 7202 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.525 29.527 0 0 0 40.441 0 49.036 0 0 0 37 0 46 0 0 0 1 0 1 9520.1 + 14129 3420 13616 32900 38230 38230 1 LVVSQLNPYTLR Unmodified 1401.798 0.79799972 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 11.5 0.5 1 1 71.566 71.566 2 3.3456E-20 20792 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 155.11 96.3 20.197 28.297 56.1 36.146 75.744 59.696 19 28 55 37 74 56 1 1 2 1 1 1 16265 14130 1127 13617 32901;32902 38231;38232 38231 2 LVVSTQTALA Unmodified 1001.5757 0.57571092 656 CON__P02769 yes yes 0 0 0 0 7.5 0.5 1 1 69.278 69.278 2 0.00059893 23607 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.531 71.575 98.279 94.254 141.42 111.99 106.27 136.61 92 93 139 112 111 131 2 2 2 3 3 3 24659 + 14131 656 13618 32903;32904 38233;38234;38235 38233 3 LVVVGAGGVGK Unmodified 954.58622 0.58621603 2126;1505 P32883;C0H5X4;Q61411 Kras;Hras GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 0 9.33 3.94 1 1 1 1 1 1 60.667 60.667 2 8.6453E-34 16393 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 196.25 124.02 78.833 579.99 439.07 299.5 504.51 515.41 74 557 427 278 501 497 1 5 3 4 3 5 113240 14132 1505;2126 13619 32905;32906;32907;32908;32909;32910 38236;38237;38238;38239;38240;38241;38242 38238 7 LVVVGDGACGK Unmodified 1073.5539 0.55392963 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 0 8.5 0.5 1 1 56.802 56.802 2 9.9903E-08 17049 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.62 68.869 69.745 0 0 70.378 122.29 0 65 0 0 65 120 0 1 0 0 1 2 0 14012 14133 1733 13620 32911;32912 38243;38244 38243 2 LVVVGDGGVGK Unmodified 998.57605 0.57604528 759 D3Z2V6;O08989 Mras Ras-related protein M-Ras yes no 0 0 0 0 9 0 1 60.728 60.728 2 0.02895 18223 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.124 6.5578 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 2615.2 14134 759 13621 32913 38245 38245 1 LVVVGGGGVGK Unmodified 940.57057 0.57056597 254 A0A1B0GRT5;P62071;A0A1B0GRG1;P10833 Rras2;Rras Ras-related protein R-Ras2;Ras-related protein R-Ras yes no 0 0 0 0 10.5 0.5 1 1 58.749 58.749 2 5.975E-08 15528 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.41 63.73 0 0 144.33 0 84.521 66.878 0 0 139 0 83 65 0 0 2 0 1 1 13116 14135 254 13622 32914;32915 38246;38247 38246 2 LVWIETPTNPTLK Unmodified 1510.8395 0.83953018 2684 Q8VCN5 Cth Cystathionine gamma-lyase yes yes 0 0 0 0 10 0 1 79.211 79.211 3 0.00012532 24664 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.241 35.281 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14136 2684 13623 32916 38248 38248 1 LVWVPSSK Unmodified 914.52255 0.52255314 2696 Q8VDD5;F2Z494 Myh9 Myosin-9 yes no 0 0 0 0 11 0 1 67.336 67.336 2 0.014908 18814 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.568 39.876 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 11933 14137 2696 13624 32917 38249 38249 1 LVYDSWSSGK Unmodified 1140.5451 0.54513908 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 10 2.31 1 1 1 1 2 64.072 64.072 2;3 6.2619E-10 19828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 160.82 119.39 598.39 613.83 797.17 471.64 624.93 852.81 563 626 793 473 638 816 5 6 7 5 5 6 134600 14138 1223 13625 32918;32919;32920;32921;32922;32923 38250;38251;38252;38253;38254;38255;38256 38253 7 LVYFQGTK Unmodified 954.51747 0.51746776 2463 Q8BVG4 Dpp9 Dipeptidyl peptidase 9 yes yes 0 0 0 0 11 0 1 62.484 62.484 2 0.050541 16717 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.419 32.046 118.79 61.15 0 0 0 0 111 65 0 0 0 0 1 1 0 0 0 0 7707.5 14139 2463 13626 32924 38257 38257 1 LVYPPFFMGLGASVYYPQQAITIAQITGEK Unmodified 3301.7097 0.70970857 3158 Q9DCZ4 Apoo Apolipoprotein O yes yes 0 0 0 0 12 0 1 108.78 108.78 4 1.6871E-06 29751 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.539 41.023 5.2974 4.8415 7.2568 0 0 0 5 5 7 0 0 0 1 1 1 0 0 0 1321.8 14140 3158 13627 32925 38258 38258 1 LVYQNIFTAMQAMIR Deamidation (N) 1798.911 0.91099734 1428;1492 P21279;P30677 Gnaq;Gna14 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-14 no no 0 1 0 0 13 0 1 101.49 101.49 3 0.0070807 41099 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.774 28.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14141 1428;1492 13628 32926 38259 38259 527 1 LVYSQPLDLPEAVEVIR Unmodified 1940.0619 0.06187856 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6 0 1 86.112 86.112 3 0.01035 32189 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.501 28.23 29.904 27.776 0 20.069 37.121 19.195 28 28 0 19 37 19 1 1 0 1 1 1 10208 14142 570 13629 32927 38260 38260 1 LWADHGVQACFGR Unmodified 1515.7041 0.70411611 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 9 0 1 57.268 57.268 3 0.055708 16586 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 33.685 24.497 108.89 110.76 0 99.551 111.53 0 102 111 0 93 111 0 1 1 0 1 1 0 10046 14143 1330 13630 32928 38261 38261 1 LWADPGAQACFGR Unmodified 1447.6667 0.66666797 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 9 0 1 66.669 66.669 2 4.2517E-07 21074 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.243 53.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14144 1255 13631 32929 38262 38262 1 LWAHLIEK Unmodified 1008.5757 0.57565135 1391 P16332 Mut Methylmalonyl-CoA mutase, mitochondrial yes yes 0 0 0 0 10 0 1 66.963 66.963 3 0.020088 19071 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.177 17.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14145 1391 13632 32930 38263 38263 1 LWAHVYAGAPVSSPEYTK Unmodified 1974.984 0.98396259 1687 P61087;A0A0J9YUI1;A0A0J9YU07;Q3V3R8;A0A0J9YUR9 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 9.5 0.5 1 1 64.8 64.8 3 1.5047E-09 18053 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.34 90.021 59.423 26.815 88.98 0 48.116 0 56 28 84 0 46 0 2 1 2 0 1 0 9590.9 14146 1687 13633 32931;32932 38264;38265 38265 2 LWASAFGGEIK Unmodified 1177.6132 0.61315906 3378 Q9Z1L5 Cacna2d3 Voltage-dependent calcium channel subunit alpha-2/delta-3;Voltage-dependent calcium channel subunit alpha-2-3;Voltage-dependent calcium channel subunit delta-3 yes yes 0 0 0 0 11 0 1 77.499 77.499 3 1.2184E-08 23433 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.4 61.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4986.1 14147 3378 13634 32933 38266 38266 1 LWAVELQK Unmodified 985.55967 0.55966693 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10.8 1.48 1 1 1 1 72.863 72.863 2;3 0.0011922 22008 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.16 59.328 584.31 493.79 429.53 638.01 406.15 45.499 549 504 427 612 403 46 3 2 2 3 2 1 61738 14148 927 13635 32934;32935;32936;32937 38267;38268;38269;38270 38268 4 LWCTFHDK Unmodified 1105.5015 0.50150012 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 9.5 0.5 1 1 57.443 57.443 3 0.0075956 16670 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.224 50.359 117.8 390.72 338.32 415.57 426.68 390.77 111 380 352 406 439 378 1 2 2 2 2 2 35127 14149 1548 13636 32938;32939 38271;38272 38271 2 LWDFQGFECIR Unmodified 1469.6762 0.67617003 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 9 0 1 84.581 84.581 2 0.0025365 29334 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.311 51.142 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 7334.8 14150 1760 13637 32940 38273 38273 1 LWDIGGQPR Unmodified 1040.5403 0.54032847 980 F6QKK2;Q8VEH3 Arl8a ADP-ribosylation factor-like protein 8A yes no 0 0 0 0 8.5 0.5 1 1 63.367 63.367 2 0.0063216 19461 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.665 0 78.637 52.881 83.785 55.046 62.118 97.365 74 56 83 56 65 93 1 1 1 1 1 1 5681.9 14151 980 13638 32941;32942 38274;38275 38275 2 LWDLTTGTTTR Unmodified 1263.6459 0.64591575 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 10.7 1.7 1 1 1 67.615 67.615 2 8.817E-08 21535 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.51 77.419 78.452 115.71 303.2 0 83.495 224.68 74 111 287 0 83 213 1 1 2 0 1 2 41415 14152 1792 13639 32943;32944;32945 38276;38277;38278 38276 3 LWEAVLSSPMDSNDLK Unmodified 1803.8713 0.8713006 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 10 3 1 1 88.27 88.27 3 0.0002449 32666 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.244 43.291 48.877 0 80.904 0 67.031 27.935 46 0 75 0 65 28 1 0 1 0 1 1 4135.5 14153 1142 13640 32946;32947 38279;38280 38279 2 LWFTLDSPPEDWTYSK Unmodified 1983.9254 0.92544466 3115 Q9DB73 Cyb5r1 NADH-cytochrome b5 reductase 1 yes yes 0 0 0 0 9 0 1 93.601 93.601 3 0.00069413 33413 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.169 43.248 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 1677.2 14154 3115 13641 32948 38281 38281 1 LWGDSGIQECFNR Unmodified 1580.7042 0.70417569 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 69.009 69.009 2;3 5.9116E-27 24294 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 171.74 144.86 187.89 235.81 132.73 107.22 359.78 375.63 176 232 130 102 361 362 4 4 3 2 6 6 166410 14155 1411 13642 32949;32950;32951;32952;32953 38282;38283;38284;38285;38286;38287 38282 6 LWGLFCSSR Unmodified 1124.5437 0.54369929 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 1 0 1 78.791 78.791 2 0.00085181 27515 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.7 67.251 69.973 68.356 84.107 27.949 26.676 87.717 66 70 83 28 28 83 2 2 2 1 1 2 12589 14156 2727 13643 32954 38288;38289 38289 2 LWGLTEMFPER Unmodified 1377.6751 0.67510739 2894 Q9CPQ3 Tomm22 Mitochondrial import receptor subunit TOM22 homolog yes yes 0 0 0 0 9.5 0.5 1 1 86.53 86.53 2 1.1803E-08 30306 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.943 73.506 30.044 0 0 39.943 26.454 29.093 28 0 0 37 28 28 1 0 0 1 1 1 4766.7 14157 2894 13644 32955;32956 38290;38291 38290 2 LWGVIDVK Unmodified 928.5382 0.53820321 3045 Q9D1P4 Chordc1 Cysteine and histidine-rich domain-containing protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 77.834 77.834 2 0.014111 24011 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.011 35.133 148.45 137.89 0 0 112.48 105.52 139 139 0 0 111 102 1 1 0 0 1 1 10167 14158 3045 13645 32957;32958 38292;38293 38292 2 LWIANYSLPR Unmodified 1231.6713 0.67134264 3105 Q9DAW6 Prpf4 U4/U6 small nuclear ribonucleoprotein Prp4 yes yes 0 0 0 0 1 0 1 76.256 76.256 3 0.003662 26348 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.064 36.636 39.59 0 18.621 38.991 18.083 0 37 0 19 37 19 0 1 0 1 1 1 0 1236.7 14159 3105 13646 32959 38294 38294 1 LWISVAR Unmodified 843.49667 0.49667274 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 6.5 5.5 1 1 66.001 66.001 2 0.048867 22239 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.847 38.01 32.936 83.281 104.43 114.54 29.974 119.6 31 82 106 111 31 113 1 2 2 2 1 2 13439 14160 464 13647 32960;32961 38295;38296 38295 2 LWLFGYDEQR Unmodified 1325.6404 0.64043645 2902 Q9CPX6 Atg3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 82.629 82.629 2;3 0.0014415 25800 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.709 71.929 79.208 38.419 0 30.079 66.337 58.599 74 38 0 28 66 56 2 1 0 1 2 2 12002 14161 2902 13648 32962;32963;32964;32965 38297;38298;38299;38300 38299 4 LWLKPDMGK Unmodified 1086.5896 0.58958685 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 8 4.97 1 1 1 65.799 65.799 3 0.0076851 16012 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.325 34.239 320.83 0 262 297.95 372.07 97.654 299 0 262 279 372 93 2 0 1 2 2 1 53325 14162 1561 13649 32966;32967;32968 38301;38302;38303 38303 3 LWLLDDSK Unmodified 988.52295 0.52294707 1231 O55033;A0A0J9YUK4;A0A0A0MQF0 Nck2 Cytoplasmic protein NCK2 no no 0 0 0 0 10 0 1 78.682 78.682 2 0.034465 24394 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.954 20.607 59.808 55.551 0 0 38.702 0 56 56 0 0 37 0 1 1 0 0 1 0 4078.8 14163 1231 13650 32969 38304 38304 1 LWNTLGVCK Unmodified 1089.5641 0.56410038 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 11.5 0.5 1 1 71.114 71.114 2 7.0497E-05 18175 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.57 77.563 98.897 82.611 236.35 85.567 141.47 114.29 93 79 227 83 139 111 1 1 2 1 1 1 70999 14164 1792 13651 32970;32971 38305;38306 38306 2 LWQTVVGK Unmodified 929.53345 0.53345218 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 0 11 0 1 69.388 69.388 3 0.0090324 19730 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.246 14.639 0 144.97 175.24 0 0 139 0 139 170 0 0 139 0 1 1 0 0 1 15250 14165 3388 13652 32972 38307;38308 38307 2 LWSIVDK Unmodified 859.48035 0.48035398 507 A2AQN5;A2AQN4;Q9QXG4;F7CU63 Acss2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 0 0 0 0 10 0 1 73.792 73.792 2 0.027165 22222 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.626 39.772 48.478 74.044 85.119 0 75.428 57.544 46 74 83 0 74 56 1 1 1 0 1 1 4003.8 14166 507 13653 32973 38309 38309 1 LWSTFFEK Unmodified 1056.528 0.52803245 774 D3Z494;G5E895;S4R2G9 Akr1b10 yes no 0 0 0 0 11.5 0.5 1 1 84.588 84.588 2;3 0.0029245 26453 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.568 39.2 112.15 47.585 0 0 0 0 111 46 0 0 0 0 3 1 0 0 0 0 15897 14167 774 13654 32974;32975 38310;38311;38312 38310 3 LWTLVSEQTR Unmodified 1231.6561 0.65608651 1371 P14115 Rpl27a 60S ribosomal protein L27a yes yes 0 0 0 0 10.5 0.5 1 1 72.392 72.392 2;3 2.5384E-05 21746 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.29 80.135 168.85 136.51 88.287 215.54 289.87 225.74 158 139 83 207 294 218 1 1 1 2 2 1 23718 14168 1371 13655 32976;32977 38313;38314 38313 2 LWTVPTNMPSK Unmodified 1272.6536 0.65364367 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 11.5 1.12 1 1 1 1 71.032 71.032 2;3 4.7117E-06 20470 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.29 73.961 211.18 78.998 147.23 104.95 130.9 129.51 198 83 143 102 134 125 3 2 2 1 2 2 38070 14169 1093 13656 32978;32979;32980;32981 38315;38316;38317;38318 38316 4 LWWLDLK Unmodified 972.54329 0.54328858 2762 Q91X72 Hpx Hemopexin yes yes 0 0 0 0 12 0 1 90.82 90.82 2 0.027111 25828 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.041 64.439 0 36.176 0 83.433 38.694 71.384 0 34 0 77 43 68 0 1 0 1 1 1 6045.1 14170 2762 13657 32982 38319 38319 1 LYASAFSER Unmodified 1042.5084 0.50835964 2322;967 Q80VM5;Q5U4C2;E9PWX1;Q9Z218;Q6NXK7;E9QN98;D3Z5I7 Dpp6;Dpp10 Dipeptidyl aminopeptidase-like protein 6;Inactive dipeptidyl peptidase 10 no no 0 0 0 0 9.33 2.62 1 1 1 55.532 55.532 2 1.3855E-06 16528 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.26 89.574 117.83 330.17 396.31 94.026 441.1 279.15 111 324 389 93 435 269 1 3 3 1 3 2 49466 14171 2322;967 13658 32983;32984;32985 38320;38321;38322 38321 3 LYASILQQK Unmodified 1062.6073 0.6073454 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 11 0.816 1 1 1 67.387 67.387 2;3 0.0001642 18939 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.28 77.261 0 118.1 0 0 0 99.138 0 111 0 0 0 93 0 1 0 0 0 1 18966 14172 1220 13659 32986;32987;32988 38323;38324;38325 38324 3 LYAWNPK Unmodified 890.46504 0.46503826 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 11 0 1 62.191 62.191 2 0.027161 16556 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.584 48.584 168.95 116.29 0 0 0 229.19 158 120 0 0 0 215 1 1 0 0 0 1 13613 14173 1472 13660 32989 38326 38326 1 LYCIYVAIGQK Unmodified 1326.7006 0.70059386 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 6.5 5.52 4 1 2 1 79.514 79.514 2;3 1.7461E-26 21227 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 187.55 137.83 220.19 239.21 184.9 144.32 388.81 285.84 208 229 178 137 383 273 6 4 5 4 5 7 127060 14174 1881 13661 32990;32991;32992;32993;32994;32995;32996;32997 38327;38328;38329;38330;38331;38332;38333;38334;38335;38336;38337;38338;38339 38334 13 LYDAYELK Unmodified 1013.507 0.50696266 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 10 3 1 1 65.109 65.109 2;3 0.0046378 23471 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.04 31.972 228.02 114.21 173.09 209.64 218.21 141.95 214 120 176 205 219 139 2 1 2 2 1 1 21838 14175 1577 13662 32998;32999 38340;38341 38341 2 LYDIEQQQITDALENIR Unmodified 2061.0378 0.037848654 2846 Q99KP3 Cryl1 Lambda-crystallin homolog yes yes 0 0 0 0 5.5 0.5 1 1 86.972 86.972 3 0.0015195 32558 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.047 28.215 49.969 36.753 46.488 18.571 9.414 29.848 47 37 46 19 9 28 2 1 2 1 1 1 3286.8 14176 2846 13663 33000;33001 38342;38343 38343 2 LYDILALLPPK Unmodified 1254.7588 0.75876067 2500 Q8C547 Heatr5b HEAT repeat-containing protein 5B yes yes 0 0 0 0 11.5 0.5 1 1 98.468 98.468 3 0.00053827 32448 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.379 46.194 14.871 13.662 32.856 8.9205 4.8202 0 14 14 33 9 5 0 1 1 2 1 1 0 2522.2 14177 2500 13664 33002;33003 38344;38345 38344 2 LYDILGVPPGASENELKK Unmodified 1942.0411 0.041143118 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 1 9 0 1 74.491 74.491 4 0.0044423 24990 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.554 23.017 79.402 0 0 48.724 82.611 57.339 74 0 0 46 83 56 1 0 0 1 1 1 4472.2 14178 3279 13665 33004 38346 38346 1 LYDKIDPEK Unmodified 1119.5812 0.58119023 1010 F6ZFT1;F8WJ64;Q9CR21 Ndufab1 Acyl carrier protein;Acyl carrier protein, mitochondrial yes no 0 0 0 1 7.5 0.5 1 1 56.114 56.114 3 0.056665 17571 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.292 12.571 266.45 155.31 171.72 99.822 267.9 258.86 250 158 168 93 269 250 2 1 1 1 2 2 65910 14179 1010 13666 33005;33006 38347;38348 38347 2 LYDQHIR Unmodified 943.48756 0.48756462 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 6 0 1 37.276 37.276 3 0.0053441 9380 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.467 59.857 0 39.368 0 39.404 55.136 47.463 0 37 0 37 56 46 0 1 0 1 1 1 4799.7 14180 3195 13667 33007 38349 38349 1 LYEAYLPETFR Unmodified 1400.6976 0.69761697 2285 Q7TN29 Smap2 Stromal membrane-associated protein 2 yes yes 0 0 0 0 7 0 1 75.874 75.874 3 0.030501 26657 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.598 20.559 0 20.216 0 0 38.044 19.168 0 19 0 0 37 19 0 1 0 0 1 1 2141.8 14181 2285 13668 33008 38350 38350 1 LYEDNQTSR Unmodified 1124.5098 0.5098162 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 4.5 0.5 1 1 37.387 37.387 2 0.0020677 10319 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.665 52.27 128.2 17.545 79.621 0 55.922 77.288 120 19 74 0 56 74 2 1 1 0 1 1 10264 14182 1255 13669 33009;33010 38351;38352 38351 2 LYEEEIR Unmodified 950.47091 0.4709115 648 CON__O43790;CON__Q14533;CON__Q6NT21;CON__P78385 no no 0 0 0 0 3.5 0.5 1 1 49.734 49.734 2 0.026936 16191 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.142 36.459 20.149 28.989 87.965 0 83.129 137.88 19 28 83 0 84 130 1 1 2 0 2 1 16559 + 14183 648 13670 33011;33012 38353;38354 38354 2 LYEEGSNKR Unmodified 1094.5356 0.53563702 1253 O70435 Psma3 Proteasome subunit alpha type-3 yes yes 0 0 0 1 6 0 1 36.398 36.398 3 0.011132 8955 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.397 42.097 178.55 126.28 0 149.23 143.33 134.49 167 130 0 139 148 130 1 1 0 1 1 1 10062 14184 1253 13671 33013 38355 38355 1 LYEIGAGTSEVR Unmodified 1293.6565 0.65648044 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 57.378 57.378 2;3 7.0248E-05 19562 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.483 62.85 59.694 55.236 19.335 29.921 53.85 97.601 56 56 19 28 56 93 2 2 1 1 2 2 7783.6 14185 3202 13672 33014;33015 38356;38357 38356 2 LYENFISEFEHR Unmodified 1582.7416 0.74160705 3352 Q9WVJ2;E9Q5I9;E9Q0U1 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 5 0 1 76.399 76.399 3 0.055346 28428 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.204 11.599 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1635.3 14186 3352 13673 33016 38358 38358 1 LYEQLSGK Unmodified 936.49165 0.49164694 1806 P70296;D3Z1V4 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 8.67 2.21 1 1 1 2 1 57.293 57.293 2;3 0.0062504 18887 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.223 35.279 571.31 625.38 831.97 796.53 645.99 641.78 538 621 824 779 645 607 4 5 6 6 5 5 435190 14187 1806 13674 33017;33018;33019;33020;33021;33022 38359;38360;38361;38362;38363;38364;38365;38366 38359 8 LYEVMTK Unmodified 882.45209 0.45209032 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 10 2.16 1 1 1 62.191 62.191 2 0.016214 19703 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.17 39.938 436.54 365.38 0 378.9 447.56 207.29 408 361 0 351 446 198 3 3 0 3 3 1 51018 14188 90 13675 33023;33024;33025 38367;38368;38369;38370 38368 4 LYEWTTEK Unmodified 1068.5128 0.51277632 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 7 0 1 64.548 64.548 2 0.018949 21331 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.064 41.986 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14189 1955 13676 33026 38371 38371 1 LYFFTQGGNLMCQPR Unmodified 1830.8545 0.8545451 2611 Q8K3G9 Appl2 DCC-interacting protein 13-beta yes yes 0 0 0 0 12 0 1 79.839 79.839 3 0.003857 21666 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.27 30.585 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1669.8 14190 2611 13677 33027 38372 38372 1 LYFGLSYAK Unmodified 1060.5593 0.55933258 977 F2Z3X6;Q9Z2A0;F2Z400;Q3TRL2 Pdpk1 3-phosphoinositide-dependent protein kinase 1 yes no 0 0 0 0 6.5 5.5 1 1 74.626 74.626 2;3 0.0079948 25641 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.923 28.109 69.225 58.229 38.117 58.241 36.981 29.848 65 56 37 56 37 28 2 1 1 2 1 1 8328 14191 977 13678 33028;33029 38373;38374 38373 2 LYFNSQGNK Unmodified 1069.5193 0.51925868 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10 0 1 54.034 54.034 3 0.00090099 13319 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.516 59.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14192 570 13679 33030 38375 38375 1 LYFSTCPFR Unmodified 1189.559 0.559015 392 A0A2R8VHH1;Q99P88 Nup155 Nuclear pore complex protein Nup155 yes no 0 0 0 0 12 0 1 69.796 69.796 2 0.003198 17694 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.713 44.613 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14193 392 13680 33031 38376 38376 1 LYFTNLQSK Unmodified 1112.5866 0.58660996 1939 Q3TWI9;D3Z2D8 Tmem63b CSC1-like protein 2 yes no 0 0 0 0 11 0 1 66.68 66.68 2 0.0021401 18525 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.342 64.022 69.468 54.9 0 80.882 0 0 65 56 0 74 0 0 1 1 0 1 0 0 6558.3 14194 1939 13681 33032 38377 38377 1 LYGFPYK Unmodified 886.45889 0.45889025 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 11 1 1 1 67.721 67.721 2 0.026368 16896 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.511 40.85 128.94 96.625 288.96 120.96 274.17 169.89 121 93 278 120 273 164 1 1 2 1 2 1 20622 14195 2646 13682 33033;33034 38378;38379 38379 2 LYGGSNVK Unmodified 836.43922 0.43921744 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 8.5 0.5 1 1 46.047 46.047 2 0.0067031 11299 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.66 8.4941 48.687 146.4 75.181 44.38 75.365 0 46 148 74 46 74 0 1 2 1 1 1 0 10818 14196 3253 13683 33035;33036 38380;38381 38381 2 LYGIQGFCK Unmodified 1084.5376 0.53755128 2864 Q99LP6 Grpel1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 0 10 0 1 67.409 67.409 3 0.015867 19351 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.193 27.342 49.074 56.275 0 0 65.675 67.416 46 56 0 0 65 65 1 1 0 0 1 1 4566.8 14197 2864 13684 33037 38382 38382 1 LYGPTNFAPIINHVAR Unmodified 1781.9577 0.95768826 633 B7ZCP4;Q8C166;A3KGK7;V9GXM6;F6R587 Cpne1 Copine-1 yes no 0 0 0 0 12 0 1 68.528 68.528 3 0.00020408 17253 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.374 39.244 0 0 63.565 30.418 40.891 47.869 0 0 60 32 42 46 0 0 1 1 1 1 4759.4 14198 633 13685 33038 38383 38383 1 LYGSGGPPPTGEEDTSEKDEL Unmodified 2176.9648 0.96480287 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 4 0.816 1 1 1 62.39 62.39 3 6.0711E-17 21962 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.01 110.47 90.565 45.063 117.49 27.72 38.702 99.138 85 46 112 28 37 93 4 3 3 1 1 3 14028 14199 1419 13686 33039;33040;33041 38384;38385;38386;38387;38388 38386 5 LYGVYCFR Unmodified 1076.5113 0.51133653 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 11 0.816 1 1 1 64.884 64.884 2 4.3593E-16 18198 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 181.42 127.26 231.28 491.47 82.08 424.26 427.97 369.25 217 470 79 400 437 353 2 3 1 3 3 3 90701 14200 3258 13687 33042;33043;33044 38389;38390;38391;38392 38389 4 LYHLFLK Unmodified 932.54837 0.54837396 3396 Q9Z2I8 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 1 0 1 70.604 70.604 3 0.0073345 23923 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.377 47.257 0 0 22.94 19.4 0 23.452 0 0 22 19 0 22 0 0 1 1 0 1 4304.7 14201 3396 13688 33045 38393 38393 1 LYIDSYEK Unmodified 1029.5019 0.50187728 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 6.33 0.471 2 1 61.426 61.426 2;3 0.013903 20768 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.981 34.127 168.58 100.61 74.968 65.188 169.16 154.01 158 102 74 65 167 149 3 2 1 2 2 3 11185 14202 3022 13689 33046;33047;33048 38394;38395;38396 38394 3 LYIGLAGLATDVQTVAQR Unmodified 1888.0418 0.04181182 3311 Q9R1P1 Psmb3 Proteasome subunit beta type-3 yes yes 0 0 0 0 11.2 0.829 1 1 2 88.476 88.476 2;3 2.8804E-19 28633 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.47 107.55 0 0 0 30.092 85.174 38.078 0 0 0 28 84 38 0 0 0 1 2 2 37086 14203 3311 13690 33049;33050;33051;33052 38397;38398;38399;38400;38401 38397 5 LYKDDQLLDDGK Unmodified 1421.7038 0.70382456 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 1 6.33 0.471 2 1 60.679 60.679 3;4 0.00036987 20475 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.499 48.196 226.38 337.23 172.29 327.86 327.83 266.74 213 334 176 315 334 259 2 3 2 3 2 2 27162 14204 1749 13691 33053;33054;33055 38402;38403;38404 38403 3 LYLAPLTTCGNLPFR Unmodified 1734.9127 0.9127119 146 A0A0R4IZY9;Q91XI1 Dus3l tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like yes no 0 0 0 0 12 0 1 83.889 83.889 3 1.9255E-05 23263 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.96 52.327 0 79.8 0 0 38.702 0 0 75 0 0 37 0 0 1 0 0 1 0 4863.2 14205 146 13692 33056 38405 38405 1 LYLCVSSPTIK Unmodified 1279.6846 0.68460945 109 Q5SU47;F6T0J8;D3Z1R6;D3Z5R9;Q5SU48;A0A0R4J102;A0A0H2UH22;E9Q5X2;E9Q969;Q812E0;Q7TN99;Q7TN98 Cpeb4;Cpeb3;Cpeb2 Cytoplasmic polyadenylation element-binding protein 2;Cytoplasmic polyadenylation element-binding protein 3;Cytoplasmic polyadenylation element-binding protein 4 yes no 0 0 0 0 11 0 1 70.073 70.073 3 0.049427 20139 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.021 13.229 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4435.6 14206 109 13693 33057 38406 38406 1 LYLEDDDPVQAEAYINR Unmodified 2022.9535 0.95345032 1270 O88544;F6QTS1;D3Z1R9;D3YV99 Cops4 COP9 signalosome complex subunit 4 yes no 0 0 0 0 3 0 1 74.034 74.034 3 5.6024E-06 27789 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.424 74.366 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 4225.5 14207 1270 13694 33058 38407 38407 1 LYLGHNYVTAIR Unmodified 1418.767 0.76703394 2797 Q921I1;E9Q035 Tf;Gm20425 Serotransferrin yes no 0 0 0 0 11.5 0.5 1 1 56.983 56.983 3 8.5795E-21 13048 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 153.11 117.75 118.36 54.637 78.158 125.05 76.956 96.942 111 56 79 120 79 93 2 1 1 2 1 2 69680 14208 2797 13695 33059;33060 38408;38409 38409 2 LYLINSPVVR Unmodified 1172.6917 0.69174374 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 6.5 5.5 1 1 69.47 69.47 2 0.011157 17527 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.841 31.72 102.97 65.335 131.72 101.03 138.6 119.7 97 70 130 102 139 116 2 2 2 2 1 2 9630.5 14209 2459 13696 33061;33062 38410;38411 38411 2 LYLNVLNR Unmodified 1003.5815 0.581465 3137 Q9DC61;A2AIW9 Pmpca Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 0 12 0 1 67.846 67.846 2 0.014471 16890 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.359 55.983 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 8584.9 14210 3137 13697 33063 38412 38412 1 LYLTNSK Unmodified 837.45962 0.45961853 3249 Q9JME5;Q9Z1T1 Ap3b2;Ap3b1 AP-3 complex subunit beta-2;AP-3 complex subunit beta-1 yes no 0 0 0 0 10.5 0.5 1 1 53.744 53.744 2 0.016214 13296 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.17 28.328 192.49 250.17 170.32 117.49 186.9 357.11 181 250 171 120 192 340 1 2 1 1 1 2 27979 14211 3249 13698 33064;33065 38413;38414 38413 2 LYMYQLFR Unmodified 1132.5739 0.57393679 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 0 1 0 1 78.921 78.921 2 0.050865 27487 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.287 28.21 49.097 0 43.789 31.595 40.983 43.603 46 0 42 32 42 42 1 0 1 1 1 1 3256.3 14212 947 13699 33066 38415 38415 1 LYNLFLK Unmodified 909.53239 0.53238955 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 3.09 4.44 9 1 1 81.7 81.7 2;3 7.8602E-07 29663 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.86 67.28 1072.1 820.34 915.6 827.61 971.5 1057.5 1008 847 925 819 999 1016 5 5 4 5 5 4 170700 14213 3397 13700 33067;33068;33069;33070;33071;33072;33073;33074;33075;33076;33077 38416;38417;38418;38419;38420;38421;38422;38423;38424;38425;38426;38427;38428 38422 13 LYNNITFEELGALLEIPAAK Unmodified 2218.1885 0.18853564 1270 O88544;F6QTS1 Cops4 COP9 signalosome complex subunit 4 yes no 0 0 0 0 10.6 2.06 1 1 1 2 105.59 105.59 3;4 3.1732E-11 43027 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.238 70.58 20.207 37.902 6.1824 44.753 41.698 20.117 19 37 9 42 42 19 1 2 1 2 2 2 9993.5 14214 1270 13701 33078;33079;33080;33081;33082 38429;38430;38431;38432;38433 38433 5 LYNTHLNK Unmodified 1001.5294 0.52942943 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 10 0 1 44.099 44.099 3 0.019086 9342 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.776 30.257 0 106.73 107.65 135.67 0 138.58 0 102 111 130 0 130 0 1 1 1 0 1 8835.6 14215 728 13702 33083 38434 38434 1 LYPAAVDTIVAIMAEGK Unmodified 1760.9383 0.93825795 3111 Q9DB27 Mcts1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 104.63 104.63 3 1.7425E-25 33532 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 139.6 113.96 36.482 0 30.296 71.359 19.188 29.848 34 0 28 68 19 28 2 0 1 4 1 1 16649 14216 3111 13703 33084;33085;33086;33087 38435;38436;38437;38438;38439;38440 38437 6 LYPAFMEGIALSDPAAK Unmodified 1792.907 0.90695782 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 8.5 0.5 1 1 89.207 89.207 3 3.5762E-06 31494 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.993 72.952 0 0 17.312 14 23.312 21.721 0 0 16 14 23 21 0 0 1 1 1 1 5943.1 14217 816 13704 33088;33089 38441;38442 38442 2 LYPATEYEISLNSVR Deamidation (N) 1754.8727 0.87268081 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 1 0 0 5.5 0.5 1 1 73.993 73.993 3 0.00091465 26686 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.331 51.3 39.452 46.89 27.406 57.8 94.37 37.815 37 47 28 56 94 38 1 2 1 2 2 2 8080.4 14218 2479 13705 33090;33091 38443;38444 38444 934 2 LYPATEYEISLNSVR Unmodified 1753.8887 0.88866522 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8 2.61 2 1 1 1 72.751 72.751 2;3 2.8023E-12 27182 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.42 86.448 138.12 138.95 205.52 178.73 258.45 193.81 130 139 204 176 260 185 3 3 4 3 4 3 72178 14219 2479 13705 33092;33093;33094;33095;33096 38445;38446;38447;38448;38449 38449 5 LYPEGLAQLAR Unmodified 1229.6768 0.67682195 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 69.797 69.797 2;3 5.3325E-08 22581 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.13 61.545 497.7 197.06 584.06 557.59 559.86 556.47 468 204 576 548 578 537 4 3 4 3 4 4 191760 14220 1606 13706 33097;33098;33099;33100 38450;38451;38452;38453 38452 4 LYPPLNTIR Unmodified 1085.6233 0.62332982 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10 0 2 63.65 63.65 2 0.0058086 17696 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.486 33.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14221 1317 13707 33101;33102 38454;38455 38455 2 LYPPLSTIR Unmodified 1058.6124 0.61243078 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 10 0 1 64.656 64.656 2 0.012307 17881 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.492 29.492 53.992 64.379 68.221 51.677 0 0 51 65 69 51 0 0 1 1 1 1 0 0 11145 14222 2432 13708 33103 38456 38456 1 LYPPSAEYPDLR Unmodified 1419.7034 0.70343063 1490 P30275;A2ARP5;B0R0E9;B0R0E8 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 7.43 2.38 1 1 4 1 64.548 64.548 2;3 4.3555E-24 21430 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.41 97.965 344.86 230.82 384.26 260.54 269.14 253.99 324 242 372 250 268 242 6 7 6 5 6 5 45006 14223 1490 13709 33104;33105;33106;33107;33108;33109;33110 38457;38458;38459;38460;38461;38462;38463;38464;38465;38466;38467;38468 38464 12 LYPPSAEYPDLRK Unmodified 1547.7984 0.79839365 1490 P30275;A2ARP5;B0R0E9;B0R0E8 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 1 7.67 0.943 2 1 59.725 59.725 3;4 0.00049991 19236 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.533 50.777 148.02 183.33 278.74 231.38 296.69 66.964 139 185 278 232 296 65 1 2 3 3 3 1 12973 14224 1490 13710 33111;33112;33113 38469;38470;38471 38469 3 LYPTHACR Unmodified 1016.4862 0.48618441 2542 Q8CGV2;E9Q060;P17532 Tph2;Tph1 Tryptophan 5-hydroxylase 2;Tryptophan 5-hydroxylase 1 yes no 0 0 0 0 8 0 1 32.423 32.423 3 0.021915 5922 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.482 43.241 48.777 34.942 67.988 0 37.054 47.979 46 37 65 0 37 46 1 1 1 0 1 1 1410.9 14225 2542 13711 33114 38472 38472 1 LYPWGIVEVENPGHCDFVK Unmodified 2258.083 0.083024708 1477 P28661 Sept4 Septin-4 yes yes 0 0 0 0 8 0 1 79.547 79.547 3 2.4085E-07 27819 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.41 54.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14226 1477 13712 33115 38473 38473 1 LYPWGIVEVENQAHCDFVK Unmodified 2303.1045 0.10448843 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7 Sept5 Septin-5 no no 0 0 0 0 9.25 2.28 1 1 1 1 80.742 80.742 3;4 7.2505E-14 31011 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.82 103.59 272.89 105.26 190.34 122.38 148.23 27.935 259 112 185 120 148 28 6 4 3 2 3 1 61919 14227 410;3398 13713 33116;33117;33118;33119 38474;38475;38476;38477;38478;38479 38479 6 LYPWGVVEVENPEHNDFLK Unmodified 2284.1164 0.11643333 899 E9Q3V6;P42208 Sept2 Septin-2 yes no 0 0 0 0 10 3 1 1 81.04 81.04 3 1.0391E-07 29257 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.738 77.615 29.761 48.944 47.546 107.82 44.334 47.771 28 46 46 102 46 46 1 1 1 2 1 1 9642.9 14228 899 13714 33120;33121 38480;38481 38480 2 LYQECEK Unmodified 968.42733 0.42733213 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 13 0 1 44.528 44.528 2 0.034101 13558 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.005 51.633 109.09 71.38 0 61.208 0 69.29 102 74 0 56 0 65 1 1 0 1 0 1 37082 14229 1581 13715 33122 38482 38482 1 LYQEMFAWK Unmodified 1214.5794 0.57941609 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 81.958 81.958 3 0.0019646 25876 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.378 39.044 0 0 0 20.252 27.359 29.067 0 0 0 19 28 28 0 0 0 1 1 1 3261.6 14230 3204 13716 33123 38483 38483 1 LYQFSFVGLR Unmodified 1228.6604 0.66044361 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 0 0 0 8.33 5.19 1 2 80.465 80.465 2;3 6.4895E-06 21824 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.39 76.013 59.809 19.059 136.61 58.415 19.874 29.848 56 19 130 56 19 28 1 1 3 1 1 1 29336 14231 1435 13717 33124;33125;33126 38484;38485;38486 38485 3 LYQHAVEYFLHAIK Unmodified 1730.9144 0.91442646 2712 Q8VEJ9 Vps4a Vacuolar protein sorting-associated protein 4A yes yes 0 0 0 0 11 0 1 81.844 81.844 4 0.00075931 25439 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.14 39.607 29.904 27.776 0 0 0 0 28 28 0 0 0 0 1 1 0 0 0 0 1801.2 14232 2712 13718 33127 38487 38487 1 LYQPEYQEVSTEEQREEISGK Unmodified 2541.1871 0.18709167 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 1 4 0 1 58.667 58.667 4 1.1864E-17 20390 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.53 103.78 69.57 34.677 0 0 29.288 0 65 37 0 0 28 0 1 1 0 0 1 0 4241.9 14233 3234 13719 33128 38488 38488 1 LYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD Unmodified 3345.4918 0.49180624 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 9.5 3.5 1 1 83.712 83.712 3;4 0.0021214 31158 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.545 24.451 0 25.36 10.511 30.604 0 39.442 0 24 10 28 0 37 0 2 1 1 0 1 10502 14234 1762 13720 33129;33130 38489;38490 38489 2 LYQSATQAVFQK Unmodified 1382.7194 0.71941505 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 9.67 0.471 1 2 66.413 66.413 2;3 4.8113E-05 18857 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.021 60.4 39.516 104.66 72.228 84.48 170.8 0 37 102 74 83 167 0 1 2 1 1 2 0 16025 14235 3203 13721 33131;33132;33133 38491;38492;38493 38492 3 LYQTDPSGTYHAWK Unmodified 1665.7787 0.77872084 3399 Q9Z2U0;A0A338P7D7;Q9CWH6 Psma7;Psma8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like yes no 0 0 0 0 8 0 1 57.387 57.387 3 3.0635E-05 17397 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.71 55.254 0 107.21 79.056 96.937 0 0 0 102 83 93 0 0 0 1 1 1 0 0 8362.3 14236 3399 13722 33134 38494 38494 1 LYQVEYAFK Unmodified 1159.5914 0.59136099 3256 Q9QUM9 Psma6 Proteasome subunit alpha type-6 yes yes 0 0 0 0 10.8 2.28 1 1 2 71.99 71.99 2;3 0.0006489 24355 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.12 68.265 268.25 56 0 189.11 250.5 67.251 250 56 0 176 250 65 3 1 0 2 3 1 40795 14237 3256 13723 33135;33136;33137;33138 38495;38496;38497;38498 38495 4 LYRPGSVAYVSR Unmodified 1366.7357 0.73573382 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 1 10.5 0.5 1 1 46.386 46.386 3 5.1332E-05 10341 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.747 66.734 0 76.962 239.12 113.15 98.039 100.6 0 74 240 111 102 97 0 1 2 1 1 1 56098 14238 2020 13724 33139;33140 38499;38500 38499 2 LYSAAATHR Unmodified 988.50903 0.50902834 2398 Q8BH66 Atl1 Atlastin-1 yes yes 0 0 0 0 8 0 1 32.906 32.906 3 0.00061091 6166 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.9 75.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14239 2398 13725 33141 38501 38501 1 LYSDEQWVEVER Unmodified 1551.7205 0.72053726 3371 Q9Z140;Q3UYN2;E9QA77 Cpne6 Copine-6 yes no 0 0 0 0 6.25 3.96 1 1 1 1 65.949 65.949 2;3 9.6408E-49 23849 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 199.21 169.9 50.218 66.077 84.041 96.766 46.807 47.7 47 65 84 92 46 46 2 2 2 2 1 2 45698 14240 3371 13726 33142;33143;33144;33145 38502;38503;38504;38505 38505 4 LYSEFLGK Unmodified 955.50148 0.50148335 1347;696 P10649;A2AE89;F6WHQ7;D3YVP8;D3YVP5;Q80W21;D3YVP6;E9QAC8;D3YX76;P15626;D3YVP9 Gstm1;Gstm6;Gstm7;Gstm2 Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 7;Glutathione S-transferase Mu 2 no no 0 0 0 0 10.2 1.57 1 1 2 1 1 71.49 71.49 2;3 0.003264 23325 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.08 75.575 1548.9 1545.6 1967.5 1231.8 1603.2 1599.8 1459 1580 1962 1226 1636 1539 5 6 7 4 5 4 371470 14241 1347;696 13727 33146;33147;33148;33149;33150;33151 38506;38507;38508;38509;38510;38511;38512;38513 38508 8 LYSESLAR Unmodified 937.4869 0.48689592 1595;2132 Q61598;A0A1Y7VL99;P50396 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 0 6.5 0.5 1 1 48.604 48.604 2 1.4355E-10 13826 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 175.86 108.82 683.54 386.82 567.55 602.94 721.58 568.66 642 408 574 595 735 549 2 1 2 2 2 1 198820 14242 2132;1595 13728 33152;33153 38514;38515 38515 2 LYSGPGIVGNVLVDPSAR Unmodified 1812.9734 0.9733979 2458 Q8BTZ7 Gmppb Mannose-1-phosphate guanyltransferase beta yes yes 0 0 0 0 9 0 1 76.938 76.938 3 0.051325 25918 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 29.845 10.45 109.18 52.222 0 71.045 0 99.138 102 56 0 65 0 93 1 1 0 1 0 1 5440.4 14243 2458 13729 33154 38516 38516 1 LYSLDSDQKDQLIEVIEK Unmodified 2135.0998 0.099780209 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 1 6.33 0.471 2 1 81.966 81.966 3;4 2.5606E-07 30458 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.95 50.748 39.468 75.272 48.033 120.33 139.37 37.942 37 74 46 111 138 37 1 2 1 2 2 1 8633.6 14244 3249 13730 33155;33156;33157 38517;38518;38519;38520 38517 4 LYSLLAK Unmodified 806.49019 0.49019038 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 0 9.25 4.82 1 1 1 1 72.135 72.135 2 0.01082 20971 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.29 61.651 118.3 404.97 553.82 254.52 336.87 557.5 111 395 540 250 343 532 1 3 3 3 3 4 114930 14245 1625 13731 33158;33159;33160;33161 38521;38522;38523;38524 38522 4 LYSLLFR Unmodified 910.52764 0.52763852 2644 Q8R1I1 Uqcr10 Cytochrome b-c1 complex subunit 9 yes yes 0 0 0 0 1 0 1 81.001 81.001 2 0.021617 28227 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.2 5.8166 49.074 56.275 0 59.804 74.657 0 46 56 0 56 74 0 1 1 0 1 1 0 11382 14246 2644 13732 33162 38525 38525 1 LYSLSVLYK Unmodified 1084.6168 0.61684746 2945 Q9CQW1 Ykt6 Synaptobrevin homolog YKT6 yes yes 0 0 0 0 8 4.97 1 1 1 77.528 77.528 2;3 0.0018822 20892 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.02 53.591 49.121 29.792 39.786 0 82.451 117.03 46 28 37 0 83 111 1 1 1 0 2 2 9365.3 14247 2945 13733 33163;33164;33165 38526;38527;38528;38529 38529 4 LYSPSQIGAFVLMK Unmodified 1552.8323 0.83233632 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 7.6 5.43 2 1 1 1 89.26 89.26 2;3 2.3916E-11 28279 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.14 97.938 119.37 87.973 163.35 95.571 173.14 119.32 112 86 161 95 171 115 4 4 5 4 4 5 37783 14248 1533 13734 33166;33167;33168;33169;33170 38530;38531;38532;38533;38534;38535;38536 38533 7 LYSTWIGGSILASLDTFK Unmodified 1971.0353 0.035329459 2672;1691 P61164;Q8R5C5 Actr1a;Actr1b Alpha-centractin;Beta-centractin no no 0 0 0 0 12 0 1 105.58 105.58 3 1.3658E-13 29271 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.63 101.24 13.455 0 9.3845 7.0917 0 7.462 13 0 9 7 0 7 2 0 1 1 0 1 3027.8 14249 1691;2672 13735 33171 38537;38538 38537 2 LYSVHQEGNK Unmodified 1173.5778 0.57783619 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7.5 0.5 1 1 39.506 39.506 3 0.00018375 9748 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.598 68.381 178.66 222.18 118.66 247.78 164.43 312.98 167 222 120 236 170 298 1 2 1 2 1 2 22590 14250 1543 13736 33172;33173 38539;38540 38539 2 LYSVVSQLIR Unmodified 1176.6867 0.68665836 1813 Q4FE56;P70398;G3UZS3 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 1 0 1 83.491 83.491 2 0.036004 29204 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.461 28.859 49.171 37.116 0 30.604 0 0 46 38 0 28 0 0 1 1 0 1 0 0 2464.4 14251 1813 13737 33174 38541 38541 1 LYTDFDEIRQEIENETER Unmodified 2299.0604 0.06043459 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 1 4.5 0.5 1 1 84.528 84.528 3 1.9231E-18 32084 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.19 94.097 88.66 36.109 36.403 28.434 0 49.036 83 37 37 28 0 46 2 1 1 1 0 1 20456 14252 815;2590 13738 33175;33176 38542;38543 38542 2 LYTEGYQVPPGATYTAIEAPK Unmodified 2268.1314 0.13141469 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 72.534 72.534 3;4 3.2217E-06 25003 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.339 44.867 49.571 94.657 158.33 150.37 104.23 175.05 47 93 158 148 112 167 2 2 3 3 3 3 7204.2 14253 2754 13739 33177;33178 38544;38545;38546 38546 3 LYTLVLTDPDAPSR Unmodified 1559.8195 0.81952302 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 9.58 1.85 2 2 2 2 2 1 1 76.614 76.614 2;3 8.6587E-35 25618 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 172.11 137.86 359.26 324.31 151.02 498.43 275.27 439.4 336 317 148 464 278 417 8 6 4 10 6 8 561510 14254 1806 13740 33179;33180;33181;33182;33183;33184;33185;33186;33187;33188;33189;33190 38547;38548;38549;38550;38551;38552;38553;38554;38555;38556;38557;38558;38559;38560;38561 38553 15 LYTLVLTDPDAPSRK Unmodified 1687.9145 0.91448604 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 1 10.7 1.7 2 2 2 68.127 68.127 3;4 2.2083E-05 24953 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.81 63.672 618.58 530.05 569.51 598.75 759.5 868.02 580 520 547 567 769 836 5 4 4 4 6 6 133350 14255 1806 13741 33191;33192;33193;33194;33195;33196 38562;38563;38564;38565;38566;38567;38568;38569 38568 8 LYTLVTYVPVTTFK Unmodified 1643.9174 0.91744615 1754 P62900;A0A0A6YX26 Rpl31 60S ribosomal protein L31 yes no 0 0 0 0 5.6 5.64 3 1 1 92.067 92.067 3;4 6.2135E-18 25841 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.07 86.741 136.77 78.139 114.86 152.67 202.88 98.45 128 81 112 147 203 95 5 5 6 6 6 5 29045 14256 1754 13742 33197;33198;33199;33200;33201 38570;38571;38572;38573;38574;38575;38576;38577;38578;38579 38578 10 LYTTMPVAK Unmodified 1022.5471 0.54705333 2624 Q8QZY1 Eif3l Eukaryotic translation initiation factor 3 subunit L yes yes 0 0 0 0 10 0 1 60.82 60.82 2 0.0050666 16459 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.743 36.32 0 29.337 27.245 28.98 0 29.848 0 28 28 28 0 28 0 1 1 1 0 1 2632.6 14257 2624 13743 33202 38580 38580 1 LYTVDYLSNMVGGR Unmodified 1586.7763 0.776278 2626 Q8R016;E9PY26 Blmh Bleomycin hydrolase yes no 0 0 0 0 9 0 1 80.462 80.462 3 0.003189 27605 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.641 27.037 29.856 37.355 0 0 0 29.848 28 37 0 0 0 28 1 1 0 0 0 1 4286.1 14258 2626 13744 33203 38581 38581 1 LYTWVEWVK Unmodified 1222.6386 0.63864553 2434 Q8BMJ2 Lars Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10.5 0.5 1 1 88.29 88.29 3 0.0082826 28115 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.598 34.223 38 0 0 0 9.0934 9.3345 38 0 0 0 9 9 1 0 0 0 1 1 3455.1 14259 2434 13745 33204;33205 38582;38583 38583 2 LYVANAGDSR Unmodified 1064.5251 0.52507234 2015 Q3UYC0;F8WGF9;E9Q2I3;Q8BU27 Ppm1h;Ppm1m Protein phosphatase 1H;Protein phosphatase 1M yes no 0 0 0 0 8 0 1 45.049 45.049 2 7.0717E-05 11593 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.42 49.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2500.3 14260 2015 13746 33206 38584 38584 1 LYVHEAVK Unmodified 957.52837 0.5283668 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 45.192 45.192 3 0.009133 11610 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.038 35.951 138.42 0 180 0 132.05 114.56 130 0 167 0 130 111 1 0 1 0 1 1 7943.3 14261 3266 13747 33207 38585 38585 1 LYVQNYTSAVPGTCLTIR Unmodified 2055.0459 0.04591092 1979 Q3UHD6;A0A0G2JF85 Snx27 Sorting nexin-27 yes no 0 0 0 0 10.5 0.5 1 1 73.752 73.752 3 4.6036E-07 22262 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.806 66.975 49 25.849 75.236 0 0 39.442 46 28 74 0 0 37 1 1 2 0 0 1 18274 14262 1979 13748 33208;33209 38586;38587 38586 2 LYWADAK Unmodified 865.4334 0.43340378 175 A0A0R4J0I9;Q91ZX7;A0A0N4SUL9;H3BJH0;H3BL52;A0A0R4J0A9;O88572;Q91VN0 Lrp1;Lrp5;Lrp6 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain;Low-density lipoprotein receptor-related protein 6;Low-density lipoprotein receptor-related protein 5 yes no 0 0 0 0 9 0 1 63.208 63.208 2 0.027191 19395 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.906 49.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5088 14263 175 13749 33210 38588 38588 1 LYWADLK Unmodified 907.48035 0.48035398 2153 Q62351;Q8C872 Tfrc Transferrin receptor protein 1 yes no 0 0 0 0 10 0 1 73.11 73.11 2 0.034977 22007 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.305 11.449 87.994 91.319 101.64 62.799 116.32 92.621 83 93 102 65 117 90 1 1 1 1 1 1 9776.2 14264 2153 13750 33211 38589 38589 1 MAAAGGGGGGGR Unmodified 917.41375 0.41374775 1110 G5E924;Q8R081 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 8.67 3.09 1 1 1 25.999 25.999 2 0.00051518 4352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.568 64.931 6.3572 23.38 39.681 0 38.015 29.599 6 23 38 0 37 28 1 2 2 0 2 2 4206.3 14265 1110 13751 33212;33213;33214 38590;38591;38592 38590 3 MAAEFIQQFNNQAFSVGQQLVFSFNDK Unmodified 3107.4811 0.48110562 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 12 0.816 1 1 1 111.42 111.42 4 7.5647E-09 36054 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.943 47.537 19.219 37.008 0 24.978 8.5386 34.934 18 36 0 23 9 33 2 4 0 4 1 4 9234.7 14266 1554 13752 33215;33216;33217 38593;38594;38595;38596;38597;38598 38594 6 MAAEFIQQFNNQAFSVGQQLVFSFNDK Oxidation (M) 3123.476 0.47602024 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 1 0 12 0 1 105.14 105.14 4 4.8714E-08 29229 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.691 45.107 0 5.32 0 0 19.874 0 0 5 0 0 19 0 0 1 0 0 1 0 611.74 14267 1554 13752 33218 38599 38599 104 1 MAALEQCLSEP Unmodified 1247.5526 0.552609 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 5.5 0.5 1 1 74.693 74.693 2 5.9654E-05 27544 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.033 66.611 99.286 46.855 44.762 97.378 27.124 99.138 93 46 46 92 28 93 3 1 1 2 1 2 29469 14268 3355 13753 33219;33220 38600;38601;38602 38601 3 MAATFIGNSTAIQELFK Oxidation (M) 1856.9342 0.93423521 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 1 0 1 0 1 89.305 89.305 3 0.00017379 31823 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.949 8.0136 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 19078 14269 3072 13754 33221 38603 38603 192 1 MAATFIGNSTAIQELFK Unmodified 1840.9393 0.93932058 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 0 0 0 8.25 4.4 3 3 2 1 1 2 92.079 92.079 2;3;4 1.2871E-46 29842 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 176.29 139.82 882.77 533.9 726.31 890.64 444.61 616.25 828 543 721 857 461 590 9 9 10 12 5 9 527350 14270 3072 13754 33222;33223;33224;33225;33226;33227;33228;33229;33230;33231;33232;33233 38604;38605;38606;38607;38608;38609;38610;38611;38612;38613;38614;38615;38616;38617;38618;38619;38620;38621;38622 38612 19 MAATFIGNSTAIQELFK Deamidation (N) 1841.9233 0.92333617 3072 Q9D6F9 Tubb4a Tubulin beta-4A chain yes yes 0 1 0 0 10.3 1.97 1 2 1 2 95.767 95.767 3 2.4568E-33 38046 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.78 121.25 50.135 47.628 167.03 186.52 46.655 128.99 47 46 162 181 46 121 2 2 4 5 1 3 47276 14271 3072 13754 33234;33235;33236;33237;33238;33239 38623;38624;38625;38626;38627;38628;38629 38627 1066 7 MADAIILAIAGGQELLAQTQK Unmodified 2154.1718 0.17183972 2001 Q3UPL0;S4R2A9;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 11.2 1.09 1 2 1 112.66 112.66 3;4 8.9048E-50 36207 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 156.15 123.76 9.612 21.696 5.41 5.465 12.552 48.31 9 21 5 5 12 46 1 2 1 1 1 3 6345.1 14272 2001 13755 33240;33241;33242;33243 38630;38631;38632;38633;38634 38633 5 MADGAPLAGVR Unmodified 1056.5386 0.53861391 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 9.5 3.5 1 1 50.452 50.452 2 8.968E-09 15913 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.88 61.049 98.447 79.023 158.55 160.83 128.59 0 93 83 158 158 130 0 1 1 1 1 1 0 14132 14273 3216 13756 33244;33245 38635;38636 38635 2 MADHEGAR Unmodified 885.3763 0.37629961 3184 Q9ERG2 Strn3 Striatin-3 yes yes 0 0 0 0 3 0 1 20.314 20.314 3 0.044266 3163 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.961 20.762 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 491.61 14274 3184 13757 33246 38637 38637 1 MADSGGQPQLTQPGK Unmodified 1513.7195 0.7194914 3277 Q9QYG0 Ndrg2 Protein NDRG2 yes yes 0 0 0 0 8 3.56 1 1 1 48.999 48.999 3 3.2269E-05 15600 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.523 52.514 167 113.92 208.15 163.99 342.37 227.95 157 120 204 166 342 223 2 2 2 2 3 3 23232 14275 3277 13758 33247;33248;33249 38638;38639;38640 38640 3 MAEESLETAAEHER Unmodified 1601.6991 0.69914989 555 A6H5Z3;E0CY34 Exoc6b Exocyst complex component 6B yes no 0 0 0 0 2 0 1 47.198 47.198 3 0.0013489 14870 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.328 37.587 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2145.6 14276 555 13759 33250 38641 38641 1 MAENLGFLGSLK Unmodified 1278.6642 0.66420836 3396 Q9Z2I8 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 9 0 1 79.877 79.877 3 0.00052891 27323 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.563 41.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3064.4 14277 3396 13760 33251 38642 38642 1 MAEVGYDR Unmodified 939.41202 0.41201641 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 4 0 1 42.989 42.989 2 0.037733 12929 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.625 32.819 0 47.351 95.311 55.527 0 69.29 0 46 93 56 0 65 0 1 1 1 0 1 4055.6 14278 2054 13761 33252 38643 38643 1 MAGAVPVFIPLR Unmodified 1269.7267 0.72674903 101 A0A0G2JGE1;Q71RI9 Ccbl2 Kynurenine--oxoglutarate transaminase 3 yes no 0 0 0 0 11 0 1 79.543 79.543 3 0.0021789 24454 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.094 36.308 0 59.584 0 0 29.288 0 0 56 0 0 28 0 0 1 0 0 1 0 2164.8 14279 101 13762 33253 38644 38644 1 MAGNEYVGFSNATFQSER Unmodified 2006.8792 0.87923952 789 D3Z7P3;D3Z7P4;F6U529 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 10 3 1 1 64.265 64.265 3 0.0032093 22975 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.799 32.694 0 20.216 0 39.22 64.897 37.59 0 19 0 37 65 37 0 1 0 1 1 1 3259.5 14280 789 13763 33254;33255 38645;38646 38646 2 MAGSAFDFENMK Unmodified 1346.5635 0.56350803 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 9.33 2.62 1 1 1 71.525 71.525 2;3 3.8128E-09 26548 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.53 86.519 0 77.501 113.9 34.79 66.392 78.884 0 74 111 37 65 74 0 1 2 1 1 1 8902.8 14281 1595 13764 33256;33257;33258 38647;38648;38649 38649 3 MAGSAFDFENMKR Unmodified 1502.6646 0.66461906 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 1 8 0 1 62.235 62.235 3 0.00014893 19606 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.656 77.06 139.09 78.933 0 111.49 0 99.138 130 83 0 102 0 93 1 1 0 1 0 1 7428.8 14282 1595 13765 33259 38650 38650 1 MAHWSNK Unmodified 872.39631 0.39630677 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 10.5 1.5 1 1 39.284 39.284 3 0.022553 6226 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.714 25.156 209.23 0 0 250.71 152.32 172.61 195 0 0 232 158 166 2 0 0 2 1 2 31240 14283 1347 13766 33260;33261 38651;38652 38652 2 MAILQIMK Unmodified 946.53438 0.53438016 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 6.5 5.5 1 1 77.77 77.77 2;3 0.0034002 27185 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.18 30.366 80.912 0 154.65 113.93 135.2 144.32 76 0 148 115 139 139 1 0 2 2 2 2 11284 14284 2151 13767 33262;33263 38653;38654 38653 2 MALDDMISTLK Unmodified 1236.6094 0.60939559 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 8 0 1 83.033 83.033 3 0.014359 29455 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.559 29.827 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2185.4 14285 1827 13768 33264 38655 38655 1 MALDIEIAAYR Unmodified 1264.6486 0.64855829 154;1557;1329;1415 P19246;P46660;A0A0R4J036;P08553;D3YZ35;P08551 Nefh;Ina;Nefm;Nefl Neurofilament heavy polypeptide;Alpha-internexin;Neurofilament medium polypeptide;Neurofilament light polypeptide no no 0 0 0 0 8 2.61 2 1 1 1 74.821 74.821 2;3 0.00069561 27096 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.389 50.602 266.95 141.8 98.581 97.399 195.21 223.66 250 148 93 93 194 214 5 4 2 2 3 4 29310 14286 1415;1557;154;1329 13769 33265;33266;33267;33268;33269 38656;38657;38658;38659;38660;38661 38656 6 MALELLTQEFGIPVER Unmodified 1844.9706 0.97062071 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10 2.16 1 1 1 99.404 99.404 3 0.00045598 40108 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.83 37.597 78.959 77.522 48.736 6.0394 66.672 77.817 74 78 46 6 65 74 3 3 2 1 2 2 11188 14287 2382 13770 33270;33271;33272 38662;38663;38664;38665 38664 4 MALVGLGVSHSVLK Unmodified 1409.8065 0.80645592 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 6.5 5.53 3 1 1 1 69.556 69.556 3;4 2.9357E-07 16922 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.17 74.209 543.07 450.12 531.26 633.09 801.07 840.32 510 457 540 617 817 802 5 4 5 6 5 6 266920 14288 3117 13771 33273;33274;33275;33276;33277;33278 38666;38667;38668;38669;38670;38671;38672 38671 7 MALVGLGVSHSVLK Oxidation (M) 1425.8014 0.80137054 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 1 0 11.5 0.5 1 1 59.711 59.711 3 0.0007578 15431 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.277 29.921 59.659 44.344 34.5 57.746 74.751 0 56 46 37 56 74 0 1 1 1 1 1 0 8976.5 14289 3117 13771 33279;33280 38673;38674 38673 195 2 MALVLEALPQIAAK Unmodified 1466.8531 0.85307176 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 8.33 5.25 1 1 1 93.268 93.268 3 3.0557E-07 29995 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.85 86.546 88.602 0 126.5 64.895 130.64 38.106 83 0 120 65 129 37 1 0 2 1 2 1 20251 14290 2059 13772 33281;33282;33283 38675;38676;38677 38676 3 MAPTPIPTR Unmodified 982.52699 0.52698659 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 7.5 0.5 1 1 47.828 47.828 2 0.0025457 13573 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.46 74.21 59.813 54.487 0 40.441 0 89.544 56 55 0 37 0 84 1 1 0 1 0 1 9365.7 14291 3267 13773 33284;33285 38678;38679 38678 2 MAPYQGPDAAPGALDYK Unmodified 1763.8189 0.8188711 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 5 0 1 64.642 64.642 3 0.0089075 22842 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.179 27.199 48.819 0 90.642 0 0 0 46 0 84 0 0 0 1 0 1 0 0 0 2696.4 14292 310 13774 33286 38680 38680 1 MAQEVLTHLK Unmodified 1168.6274 0.62742892 2222 Q6P5F9;A2AKT6 Xpo1 Exportin-1 yes no 0 0 0 0 8 0 1 62.276 62.276 3 0.010324 19631 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.471 27.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14293 2222 13775 33287 38681 38681 1 MASTFIGNSTAIQELFK Unmodified 1856.9342 0.93423521 2805 Q922F4 Tubb6 Tubulin beta-6 chain yes yes 0 0 0 0 6.67 4.03 1 1 1 90.125 90.125 3 3.2313E-06 27196 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.12 0 20.387 0 86.034 0 0 59.696 19 0 83 0 0 56 1 0 2 0 0 2 25388 14294 2805 13776 33288;33289;33290 38682;38683;38684 38684 3 MASVTGK Unmodified 692.35271 0.35271062 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 44.016 44.016 2 0.031273 11051 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.265 47.027 139.09 78.933 234.5 249.44 0 99.138 130 83 222 241 0 93 1 1 1 2 0 1 27924 14295 2179 13777 33291;33292 38685;38686 38685 2 MATDPENIIK Unmodified 1130.5642 0.56415996 2149 Q62277 Syp Synaptophysin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 60.721 60.721 2;3 1.5505E-13 21152 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.63 88.352 34.224 178.38 75.211 134.93 207.85 285.09 32 171 74 130 214 273 1 4 1 3 4 4 95234 14296 2149 13778 33293;33294;33295;33296 38687;38688;38689;38690;38691 38691 5 MATVWDEAEQDGIGEEVLK Unmodified 2118.978 0.97795051 463;14 A0A087WPH7;F6Q2E3;A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A no no 0 0 0 0 4 0 1 83.184 83.184 3 5.2305E-11 31518 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.021 61.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14297 14;463 13779 33297 38692 38692 1 MAVTFIGNSTAIQELFK Unmodified 1868.9706 0.97062071 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 0 0 7.5 5.1 3 1 2 1 1 94.077 94.077 2;3;4 7.8926E-34 30289 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 146.78 121.46 305.21 232.44 363.54 302.9 390.35 137.35 287 241 353 296 383 132 4 5 3 8 5 4 241950 14298 1863 13780 33298;33299;33300;33301;33302;33303;33304;33305 38693;38694;38695;38696;38697;38698;38699;38700;38701;38702;38703;38704;38705 38699 13 MAVTFIGNSTAIQELFK Oxidation (M) 1884.9655 0.96553533 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 1 0 10.4 1.15 1 2 3 5 2 89.417 89.417 3;4 2.8424E-06 27851 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.67 76.461 108.23 160.14 99.022 38.547 76.086 156.7 103 156 96 37 74 148 5 5 4 2 2 5 42000 14299 1863 13780 33306;33307;33308;33309;33310;33311;33312;33313;33314;33315;33316;33317;33318 38706;38707;38708;38709;38710;38711;38712;38713;38714;38715;38716;38717;38718;38719;38720 38712 155 15 MAVTFIGNSTAIQELFK Deamidation (N) 1869.9546 0.9546363 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 1 0 0 9.67 1.6 1 3 1 1 98.941 98.941 3;4 4.788E-08 40024 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.04 84.178 46.051 47.337 0 24.708 63.338 99.929 43 47 0 23 63 96 2 2 0 1 3 4 38568 14300 1863 13780 33319;33320;33321;33322;33323;33324 38721;38722;38723;38724;38725;38726 38726 753 6 MAVTFIGNSTAIQELFK Oxidation (M);Deamidation (N) 1885.9496 0.94955092 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 1 1 0 13 0 1 87.269 87.269 3 9.6959E-10 34376 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.378 60.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14301 1863 13780 33325 38727 38727 753 155 1 MAVTFIGNSTAIQELFKR Unmodified 2025.0717 0.07173174 1863 P99024 Tubb5 Tubulin beta-5 chain yes yes 0 0 0 1 12 0 1 84.654 84.654 4 0.00033918 23542 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.03 36.611 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2661.4 14302 1863 13781 33326 38728 38728 1 MAWTLIEQLQGGSYK Unmodified 1723.8603 0.86034198 3340 Q9WV18 Gabbr1 Gamma-aminobutyric acid type B receptor subunit 1 yes yes 0 0 0 0 11.5 0.5 1 1 90.355 90.355 3 1.4929E-08 25730 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.837 72.775 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 7471 14303 3340 13782 33327;33328 38729;38730 38730 2 MCASSCDFVK Unmodified 1203.4723 0.47225019 2605 Q8K356;Q9WUC3 Ly6h Lymphocyte antigen 6H yes no 0 0 0 0 7 0 1 54.202 54.202 2 3.6488E-05 16505 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.05 100.15 29.865 0 30.145 0 37.018 49.046 28 0 28 0 37 47 1 0 1 0 1 1 2566.1 14304 2605 13783 33329 38731 38731 1 MCDPGMTAFEPEALGNLVEGLDFHR Oxidation (M) 2821.251 0.25097103 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 1 0 5 0 1 88.483 88.483 3 2.5869E-07 33791 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.418 48.832 0 5.32 0 0 5.23 0 0 5 0 0 5 0 0 1 0 0 1 0 1392.3 14305 1355 13784 33330 38732 38732 77 1 MCDPGMTAFEPEALGNLVEGLDFHR Unmodified 2805.2561 0.2560564 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 7.75 3.11 1 1 1 1 92.863 92.863 3 6.2696E-26 36966 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.88 104.9 58.887 25.408 24.025 56.33 8.9095 55.178 55 27 23 53 9 52 4 3 1 3 1 3 40249 14306 1355 13784 33331;33332;33333;33334 38733;38734;38735;38736;38737;38738 38738 6 MCDVMAAYFGK Unmodified 1291.5399 0.53993582 1836 Q3TWV4;P84091;A0A338P6T4 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 10.5 0.5 1 1 80 80 3 0.0009167 25027 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.776 42.559 89.375 0 127.27 71.787 80.231 95.783 84 0 121 74 83 92 2 0 2 2 2 2 9786.6 14307 1836 13785 33335;33336 38739;38740 38739 2 MCHNINR Unmodified 943.41164 0.41163926 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 7 0 1 24.829 24.829 3 0.047088 3696 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.12 34.238 14.812 18.894 19.35 0 19.197 19.706 14 19 19 0 19 19 1 1 1 0 1 1 575.32 14308 1925 13786 33337 38741 38741 1 MCINTEWGAFGDDGSLEDIR Unmodified 2284.9729 0.97288191 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.33 4.03 1 1 1 82.611 82.611 3 1.3351E-10 31456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.945 70.58 39.422 20.216 56.709 67.88 19.439 88.478 37 19 55 65 19 83 1 1 2 2 1 2 18266 14309 1055 13787 33338;33339;33340 38742;38743;38744 38743 3 MCLFAGFQR Unmodified 1128.5209 0.52085536 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 6.5 5.5 1 1 71.809 71.809 2;3 0.0021024 24357 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.51 77.195 108.88 90.329 76.651 116.75 0 39.442 102 93 74 111 0 37 1 2 1 2 0 1 10853 14310 2714 13788 33341;33342 38745;38746 38745 2 MCLVEIEK Unmodified 1020.4984 0.49838858 2736 Q91VD9;A0A087WQR0;A0A087WP77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 8.75 2.49 2 1 1 66.054 66.054 2;3 0.0048732 22144 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.38 28.488 187.17 219.34 253.94 273.68 276.37 327.9 176 222 259 269 287 315 2 3 3 3 3 3 21093 14311 2736 13789 33343;33344;33345;33346 38747;38748;38749;38750 38747 4 MDANVLFLK Unmodified 1049.558 0.55795237 1768 P63046 Sult4a1 Sulfotransferase 4A1 yes yes 0 0 0 0 9 0 1 76.874 76.874 2 0.023802 25827 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.65 37.495 0 59.584 0 0 0 59.696 0 56 0 0 0 56 0 1 0 0 0 1 4205.4 14312 1768 13790 33347 38751 38751 1 MDATANDVPSPYEVK Unmodified 1635.745 0.74503745 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 5 0 1 61.973 61.973 3 0.00094117 21650 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.514 44.538 49.176 36.052 0 0 27.265 58.918 46 37 0 0 28 56 1 1 0 0 1 1 5917.2 14313 1470 13791 33348 38752 38752 1 MDATLTAR Acetyl (Protein N-term) 919.44332 0.44331654 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 1 0 0 0 2.5 0.5 1 1 52.388 52.388 2 0.02273 17751 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.815 32.988 0 0 0 9.4714 19.439 0 0 0 0 9 19 0 0 0 0 1 1 0 2343.4 14314 2382 13792 33349;33350 38753;38754 38754 2 MDCVWSNWK Unmodified 1224.5056 0.50559922 2279 Q7M6W1;A3QM89 Rtn1 Reticulon yes no 0 0 0 0 9 0.816 1 1 1 72.642 72.642 2;3 0.0011133 21762 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.749 45.405 78.764 69.16 107.21 151.48 206.99 136.74 74 65 102 148 204 130 1 1 1 3 2 2 19486 14315 2279 13794 33351;33352;33353 38755;38756;38757 38757 3 MDDREDLVYQAK Acetyl (Protein N-term) 1523.6926 0.69260795 1715 P62259;D6REF3 Ywhae 14-3-3 protein epsilon yes no 1 0 0 1 7.5 5.5 1 1 57.908 57.908 2;3 0.00016357 19975 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.368 18.695 167.45 162.84 212.48 165.4 179.28 193.16 158 167 213 166 185 186 2 2 2 2 2 2 158550 14316 1715 13795 33354;33355 38758;38759 38759 2 MDEDVLTTLK Acetyl (Protein N-term) 1205.585 0.58495498 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 1 0 0 0 3.5 0.5 1 1 82.97 82.97 2 0.0018437 30930 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.997 25.667 0 0 0 20.767 0 29.848 0 0 0 19 0 28 0 0 0 1 0 1 3238.9 14317 1518 13797 33356;33357 38760;38761 38760 2 MDEEEVEVFLPK Unmodified 1463.6854 0.68539731 2090 Q60854;F8WIV2 Serpinb6;Serpinb6a Serpin B6 yes no 0 0 0 0 4 0 1 78.523 78.523 3 0.0026897 29397 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.143 29.352 0 0 71.412 0 19.197 19.706 0 0 66 0 19 19 0 0 1 0 1 1 2557.3 14318 2090 13798 33358 38762 38762 1 MDEEIVSEK Acetyl (Protein N-term) 1120.4958 0.49580562 744 D3Z0Q9 Slc9a6 Sodium/hydrogen exchanger yes yes 1 0 0 0 1 0 1 64.037 64.037 2 0.005653 21443 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.796 32.02 30.044 0 0 0 37.714 28.772 28 0 0 0 37 28 1 0 0 0 1 1 5400.5 14319 744 13799 33359 38763 38763 1 MDEEIVSEK Acetyl (Protein N-term);Oxidation (M) 1136.4907 0.49072025 744 D3Z0Q9 Slc9a6 Sodium/hydrogen exchanger yes yes 1 0 1 0 1 0 1 52.835 52.835 2 0.0079152 16285 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.676 42.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14320 744 13799 33360 38764 38764 40 1 MDELGSK Unmodified 778.3531 0.35310455 2086 Q60771 Cldn11 Claudin-11 yes yes 0 0 0 0 13 0 1 49.179 49.179 2 0.06242 15904 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.248 32.261 156.95 194.44 146.68 168.14 300.1 326.16 148 195 154 167 305 314 1 1 1 1 1 1 21226 14321 2086 13800 33361 38765 38765 1 MDELQDVQLTEIKPLLNDK Acetyl (Protein N-term) 2283.1668 0.16681392 2687 Q9QYF9;Q8VCV2;Q8CBD0 Ndrg3 Protein NDRG3 yes no 1 0 0 1 5 0 1 91.423 91.423 3 1.1751E-06 34658 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.314 31.236 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14322 2687 13801 33362 38766 38766 1 MDELQLFR Unmodified 1050.5168 0.51681584 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9.5 3.5 1 1 72.736 72.736 2 0.012552 27244 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.921 43.203 187.23 227.36 332.26 83.555 364.82 260.51 176 222 324 83 361 250 2 2 3 1 3 2 27247 14323 1875 13802 33363;33364 38767;38768;38769 38769 3 MDENEFVAVTSTNAAK Oxidation (M);Deamidation (N) 1742.7669 0.76689511 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 1 1 0 5 0 1 57.172 57.172 3 0.014733 19439 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.014 8.9022 29.935 0 18.254 48.327 45.896 0 28 0 19 46 46 0 1 0 1 1 1 0 1434.9 14324 207 13803 33365 38770 38770 73 17 1 MDENEFVAVTSTNAAK Unmodified 1725.788 0.7879649 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 8 3.56 1 1 1 65.14 65.14 3 2.0741E-05 23145 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.235 6.8875 29.705 96.22 120.35 173.9 135.76 126.72 28 93 120 168 139 120 1 2 2 2 2 2 18623 14325 207 13803 33366;33367;33368 38771;38772;38773 38771 3 MDENHQAR Unmodified 999.41923 0.41922706 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 3 0 1 19.969 19.969 3 0.0023583 3065 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.069 62.85 26.7 24.8 0 23.693 18.786 0 25 25 0 22 19 0 1 1 0 1 1 0 905.66 14326 1893 13804 33369 38774 38774 1 MDENQFVAVTSTNAAK Oxidation (M) 1740.7989 0.79886394 2212;1158;1850;836 O08553;Q3TT92;E9PWE8;Q62188;D3YUS0;P97427;Q6P1J1 Dpysl2;Dpysl3;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 0 1 0 5.29 0.7 1 3 3 59.709 59.709 3 0.0009695 19285 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.489 42.351 188.13 122.12 142.91 55.527 208.83 127.67 176 122 140 56 204 121 4 3 4 2 4 2 16681 14327 1158;836;1850;2212 13805 33370;33371;33372;33373;33374;33375;33376 38775;38776;38777;38778;38779;38780;38781;38782;38783 38779 42 9 MDENQFVAVTSTNAAK Oxidation (M);Deamidation (N) 1741.7829 0.78287952 2212;1158;1850;836 O08553;Q3TT92;E9PWE8;Q62188;D3YUS0;P97427;Q6P1J1 Dpysl2;Dpysl3;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 1 1 0 4 0 1 57.091 57.091 3 0.00062164 19675 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.851 39.107 0 39.368 0 0 38.044 19.168 0 37 0 0 37 19 0 1 0 0 1 1 3154.6 14328 1158;836;1850;2212 13805 33377 38784 38784 218 42 1 MDENQFVAVTSTNAAK Deamidation (N) 1725.788 0.7879649 2212;1158;1850;836 O08553;Q3TT92;E9PWE8;Q62188;D3YUS0;P97427;Q6P1J1 Dpysl2;Dpysl3;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 1 0 0 5 0.816 1 1 1 63.973 63.973 3 1.4537E-05 22617 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.234 58.128 108.48 69.69 152.13 73.513 77.404 108.73 102 74 148 74 74 102 2 2 3 2 1 2 38288 14329 1158;836;1850;2212 13805 33378;33379;33380 38785;38786;38787 38786 218 3 MDENQFVAVTSTNAAK Unmodified 1724.8039 0.80394931 2212;1158;1850;836 O08553;Q3TT92;E9PWE8;Q62188;D3YUS0;P97427;Q6P1J1 Dpysl2;Dpysl3;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 1 no no 0 0 0 0 7.14 2.59 2 2 1 1 1 62.353 62.353 3;4 5.5117E-38 21157 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 153.95 133.1 932.22 717.26 1207.8 874.5 1257.4 1111.9 877 734 1191 872 1277 1074 5 5 7 7 9 7 447240 14330 1158;836;1850;2212 13805 33381;33382;33383;33384;33385;33386;33387 38788;38789;38790;38791;38792;38793;38794;38795;38796 38791 9 MDFLLGNPFSSPVGQR Acetyl (Protein N-term) 1805.8771 0.87705468 1277 Q3UDC3;O88746;A0A1D5RM12;A0A1D5RM84 Tom1 Target of Myb protein 1 yes no 1 0 0 0 8 0 1 106.34 106.34 2 0.00015271 36654 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.592 27.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 574.31 14331 1277 13806 33388 38797 38797 1 MDFQQLADVAEK Acetyl (Protein N-term) 1435.6653 0.66533057 27 A0A087WQV4;Q8CGA4 Mturn Maturin yes no 1 0 0 0 4 0 1 89.61 89.61 2 9.1652E-06 33690 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.17 56.549 5.365 0 24.886 4.372 0 14.924 5 0 23 4 0 14 1 0 1 1 0 1 875.51 14332 27 13807 33389 38798;38799 38799 2 MDIPFLSFLPAEVR Unmodified 1633.8538 0.85380004 50 F6W8I0;A0A0A0MQI6;A0A0A0MQP0 Yjefn3 YjeF N-terminal domain-containing protein 3 yes no 0 0 0 0 10 0 1 101.92 101.92 2 0.0024521 33045 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.267 20.899 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 0 807.91 14333 50 13808 33390 38800 38800 1 MDIVHLLETNTEPLQER Unmodified 2037.0201 0.0200901 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6 0 1 81.64 81.64 3 0.00024037 30184 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.368 41.601 9.4617 38.73 0 40.441 0 0 9 37 0 37 0 0 1 1 0 1 0 0 3821.1 14334 3449;3451 13809 33391 38801 38801 1 MDLFSALIK Unmodified 1036.5627 0.5627034 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 10.3 0.471 2 1 91.076 91.076 2;3 0.0010685 29165 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.42 59.997 0 29.792 0 60.675 28.359 36.244 0 28 0 56 28 34 0 1 0 2 1 1 8600.5 14335 2262 13811 33392;33393;33394 38802;38803;38804 38804 3 MDLQLHIYQLK Unmodified 1400.7486 0.74860669 2301 Q80TJ1;K4DI76;J3QJW3 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 10 0 1 70.597 70.597 3 0.0061038 20817 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.569 31.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14336 2301 13812 33395 38805 38805 1 MDPETCPCPTGGSCTCSDK Acetyl (Protein N-term) 2200.784 0.78396021 1471 P28184;A0A1D5RLI5;A0A1D5RLF4 Mt3 Metallothionein-3 yes no 1 0 0 0 2 0.816 1 1 1 53.174 53.174 3 1.811E-07 17532 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.012 74.868 60.267 84.1 154.76 47.902 37.054 146.05 57 84 149 47 37 138 3 3 3 2 1 3 46584 14337 1471 13813 33396;33397;33398 38806;38807;38808;38809 38808 4 MDPETCPCPTGGSCTCSDK Acetyl (Protein N-term);Oxidation (M) 2216.7789 0.77887483 1471 P28184;A0A1D5RLI5;A0A1D5RLF4 Mt3 Metallothionein-3 yes no 1 0 1 0 1.5 0.5 1 1 45.016 45.016 3 2.5933E-05 13948 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.745 57.568 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2567.9 14338 1471 13813 33399;33400 38810;38811 38811 100 2 MDPLQEANGTFALNLLK Acetyl (Protein N-term);Deamidation (N) 1916.9554 0.95536458 2090 Q60854;K7E6F1;E9Q3Y1;E9Q6X2;E9Q108;E9Q0P9;E9PZQ9;E9Q4R2;E9PYY0;E9Q5Q5 Serpinb6;Serpinb6a Serpin B6 yes no 1 1 0 0 5.5 0.5 1 1 107.43 107.43 3 0.00031228 37941 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.7 16.334 7.501 1.984 0 6.5215 1.9431 0 7 2 0 6 2 0 2 1 0 2 1 0 1720.9 14339 2090 13814 33401;33402 38812;38813 38813 809 2 MDPLSELQDDLTLDDTSQALNQLK Acetyl (Protein N-term) 2744.3062 0.30622052 2047 Q5FWK3 Arhgap1 Rho GTPase-activating protein 1 yes yes 1 0 0 0 13 0 1 110.4 110.4 3 1.0465E-16 44332 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.922 41.272 4.2381 6.0323 3.9447 0 0 6.396 4 6 4 0 0 6 1 1 1 0 0 1 1097.4 14340 2047 13815 33403 38814 38814 1 MDPNTIIEALR Acetyl (Protein N-term) 1313.6649 0.66493664 3164 Q9EPL8;A0A140LHD0 Ipo7 Importin-7 yes no 1 0 0 0 9 4 1 1 95.682 95.682 2 2.3359E-05 35472 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.692 72.561 35.248 1.682 25.606 1.8762 37.714 28.772 33 2 24 2 37 28 2 1 2 1 1 1 2568 14341 3164 13816 33404;33405 38815;38816 38815 2 MDQDKDDQITLEEFK Unmodified 1853.8353 0.83530902 2392 Q8BGZ1 Hpcal4 Hippocalcin-like protein 4 yes yes 0 0 0 1 4 0 1 67.209 67.209 4 0.0047504 24081 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.823 31.541 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 2770.2 14342 2392 13817 33406 38817 38817 1 MDSGFGSDFGGTGGGK Acetyl (Protein N-term) 1517.6093 0.60927225 1708 P62075;A0A1W2P756;A0A1W2P7H2 Timm13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 1 0 0 0 4 0 1 71.379 71.379 2 1.2473E-05 25919 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.382 36.558 20.292 18.848 0 20.767 0 0 19 19 0 19 0 0 1 1 0 1 0 0 2590.5 14343 1708 13818 33407 38818 38818 1 MDSLAAPQDR Acetyl (Protein N-term) 1144.5183 0.5182724 410 A0A338P6R8;A0A338P769 yes no 1 0 0 0 1.5 0.5 1 1 54.663 54.663 2 1.4621E-09 18263 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.635 43.478 0 20.216 58.524 46.429 19.183 78.337 0 19 56 46 19 74 0 1 2 2 1 3 46715 14344 410 13819 33408;33409 38819;38820;38821 38821 3 MDSTEPAYSEK Unmodified 1256.5231 0.52308301 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 46.859 46.859 2 1.7125E-13 14551 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.07 95.339 39.419 88.179 157.84 171.1 107.37 115.26 37 84 158 167 111 111 1 2 4 4 2 2 21864 14345 1729 13820 33410;33411;33412;33413 38822;38823;38824;38825 38825 4 MDSTEPAYSEK Oxidation (M) 1272.518 0.51799763 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 1 0 4 0 1 40.322 40.322 3 0.0091034 11725 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.164 32.782 0 20.216 0 0 0 59.696 0 19 0 0 0 56 0 1 0 0 0 1 2062.6 14346 1729 13820 33414 38826 38826 129 1 MDSTEPPYSQK Oxidation (M) 1297.5496 0.54963211 1341 P10126;D3Z3I8;D3YZ68 Eef1a1 Elongation factor 1-alpha 1 yes no 0 0 1 0 4 0 1 41.681 41.681 3 0.043202 12303 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.915 30.714 0 24.095 22.575 19.422 0 0 0 23 23 19 0 0 0 1 1 1 0 0 4768.8 14347 1341 13821 33415 38827 38827 74 1 MDTGAGSIR Acetyl (Protein N-term) 948.43348 0.43348014 827 E9PV44 Atpif1 yes yes 1 0 0 0 1 0 1 44.597 44.597 2 0.0071909 12857 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.906 45.099 20.387 0 0 30.604 0 49.036 19 0 0 28 0 46 1 0 0 1 0 1 3110.5 14348 827 13822 33416 38828 38828 1 MDTIGHDDEVIR Unmodified 1399.6402 0.64017845 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 3 0 1 48.749 48.749 3 0.00073652 16139 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.14 43.829 20.013 27.785 39.348 0 0 20.254 19 28 38 0 0 19 1 1 1 0 0 1 3324.3 14349 1813 13823 33417 38829 38829 1 MDVGGLSDPYVK Unmodified 1279.6118 0.61183843 1553;223 A0A0R4J2C2;P46097;P46096;Q9R0N5 Syt2;Syt1;Syt5 Synaptotagmin-2;Synaptotagmin-1;Synaptotagmin-5 no no 0 0 0 0 6.5 1.12 1 1 1 1 66.423 66.423 2;3 1.779E-11 23023 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.9 66.627 166.96 161.49 295.47 157.77 179.2 280.57 158 167 287 158 185 268 3 3 3 2 3 3 39451 14350 223;1553 13824 33418;33419;33420;33421 38830;38831;38832;38833 38831 4 MDYEDDR Unmodified 942.33891 0.33891105 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 0 1 0 1 38.373 38.373 2 0.040319 10412 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.116 58.491 15.022 0 0 14.843 24.422 0 14 0 0 14 24 0 1 0 0 1 1 0 2204.6 14351 2602 13825 33422 38834 38834 1 MDYEDDRLR Unmodified 1211.5241 0.52408606 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 1 3 0 1 42.374 42.374 3 0.038574 13109 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.327 33.541 48.765 55.416 52.633 98.512 0 49.036 46 56 56 93 0 46 1 1 1 1 0 1 9504.2 14352 2602 13826 33423 38835 38835 1 MDYYNALNLYMHQVLTR Unmodified 2144.0183 0.018315961 115 A0A0J9YU92;Q8VDH1 Fbxo21 F-box only protein 21 yes no 0 0 0 0 11 0 1 87.488 87.488 3 0.0001269 27852 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.815 53.107 0 29.484 18.4 8.7404 0 20.254 0 28 19 9 0 19 0 1 1 1 0 1 1190.2 14353 115 13827 33424 38836 38836 1 MEALILEPSLYTVK Acetyl (Protein N-term) 1647.8793 0.87934609 397 A0A2R8VJV3;Q8R3M1;P61924 Copz1 Coatomer subunit zeta-1 yes no 1 0 0 0 6 0 1 103.51 103.51 3 3.9382E-05 37664 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.813 21.767 9.6281 5.7348 0 0 9.414 0 9 6 0 0 9 0 1 1 0 0 1 0 663 14354 397 13829 33425 38837 38837 1 MEALIPVINK Acetyl (Protein N-term) 1168.6526 0.65258104 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 1 0 0 0 8.75 2.59 1 2 1 94.001 94.001 2 5.7863E-05 35618 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.825 43.931 72.579 58.696 14.967 46.107 32.479 73.693 68 60 15 43 32 70 3 3 1 2 1 3 19043 14355 815;2590 13830 33426;33427;33428;33429 38838;38839;38840;38841 38838 4 MEANIDR Unmodified 847.3858 0.38580166 1777 P63213 Gng2 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 yes yes 0 0 0 0 8.5 4.5 1 1 37.803 37.803 2 0.035925 10612 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.548 24.267 309.02 0 0 335.2 483.38 218.07 288 0 0 315 484 210 2 0 0 2 2 1 53043 14356 1777 13831 33430;33431 38842;38843 38842 2 MEAVLNELVSVEDLK Acetyl (Protein N-term) 1729.8808 0.88080265 2917 Q9CQ92 Fis1 Mitochondrial fission 1 protein yes yes 1 0 0 0 8 3.56 1 1 1 117.61 117.61 3 1.7076E-05 37689 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.709 29.53 5.334 2.0758 8.3236 4.062 2.0208 6.3383 5 2 8 4 2 6 1 1 2 1 1 2 4348.7 14357 2917 13832 33432;33433;33434 38844;38845;38846 38844 3 MEDALDNYVIR Unmodified 1337.6286 0.62855113 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 5 0 1 69.156 69.156 2 0.0034354 24979 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.942 40.957 39.613 17.545 0 20.767 0 39.442 37 19 0 19 0 37 1 1 0 1 0 1 2118 14358 2782 13833 33435 38847 38847 1 MEDDAPVIYGLEFQAR Acetyl (Protein N-term) 1894.8771 0.87711426 348 A0A217FL60;A0A1Y7VN36;Q8K0G5 Tssc1 Protein TSSC1 yes no 1 0 0 0 3 0 1 91.616 91.616 2 0.00033113 32067 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.448 53.759 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 0 709.04 14359 348 13834 33436 38848 38848 1 MEDEAVLDR Unmodified 1076.4808 0.48082426 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 1.5 0.5 1 1 49.254 49.254 2 0.0038159 14724 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.677 14.191 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14360 935 13835 33437;33438 38849;38850 38849 2 MEDEEELAHQYETIIDECGHGR Unmodified 2660.1119 0.11189459 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 3 0 1 69.798 69.798 4 0.0087469 25799 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.833 25.124 0 0 39.709 7.2996 9.0787 0 0 0 37 9 9 0 0 0 1 1 1 0 1767.7 14361 2370 13836 33439 38851 38851 1 MEDMNEYSNIEEFAEGSK Acetyl (Protein N-term) 2163.8613 0.86126578 3370 Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like yes yes 1 0 0 0 2.5 0.5 1 1 87.348 87.348 3 2.8999E-07 31606 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.86 31.695 11.741 5.9519 5.3831 9.837 0 4.264 11 6 5 9 0 4 2 1 1 1 0 1 2865.4 14362 3370 13837 33440;33441 38852;38853 38853 2 MEDTEPFSAELLSAMMR Unmodified 1956.8631 0.86312045 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 8 3.56 1 1 1 93.274 93.274 2;3 8.6773E-09 34986 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.67 93.851 14.922 9.0677 18.504 9.0189 27.546 68.504 14 9 18 9 28 65 2 1 2 1 2 3 12334 14363 1411 13838 33442;33443;33444 38854;38855;38856 38854 3 MEDYLQDCR Acetyl (Protein N-term) 1270.4958 0.4958224 2415 Q8BIW1 Prune Protein prune homolog yes yes 1 0 0 0 2 0 1 64.878 64.878 2 0.0034042 23121 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 71.379 65.553 0 29.792 0 0 19.197 19.706 0 28 0 0 19 19 0 1 0 0 1 1 1163.4 14364 2415 13839 33445 38857 38857 1 MEEDLFQLR Acetyl (Protein N-term) 1221.57 0.56997362 2362 Q8BFT9 Svop Synaptic vesicle 2-related protein yes yes 1 0 0 0 2.5 0.5 1 1 85.177 85.177 2 0.0034888 31238 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.754 73.979 0 0 5.3268 3.9987 2.9698 2.0473 0 0 5 4 3 2 0 0 1 2 1 1 1071.9 14365 2362 13840 33446;33447 38858;38859 38859 2 MEEEVLLLEDQNSK Unmodified 1675.7975 0.79746695 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 4 0 1 74.461 74.461 3 0.0012698 27437 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.071 38.748 0 29.493 17.911 19.7 0 0 0 28 19 19 0 0 0 1 1 1 0 0 2139.1 14366 1974 13841 33448 38860 38860 1 MEEFKDQLPADECNK Unmodified 1852.7971 0.79714938 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 1 5 0 1 59.788 59.788 3 0.017609 20710 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.914 28.892 29.514 36.404 58.259 0 28.62 19.437 28 37 56 0 28 19 1 1 1 0 1 1 2581.3 14367 1533 13842 33449 38861 38861 1 MEEIVEGCTGALHILAR Unmodified 1897.939 0.93900301 1878;1879 Q02248;F7BAC9;F7CRC6;Q02257 Ctnnb1;Jup Catenin beta-1;Junction plakoglobin no no 0 0 0 0 6 0 1 72.815 72.815 3 0.0031479 26105 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.888 17.439 59.511 34.219 67.977 0 66.334 48.209 56 37 65 0 65 47 1 1 1 0 1 1 5042.6 14368 1878;1879 13843 33450 38862 38862 1 MEEVVIAGMSGK Acetyl (Protein N-term) 1291.6152 0.61520925 1412 P19096;A0A0U1RNJ1;A0A0U1RPP5 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 1 0 0 0 9 4 1 1 87.315 87.315 2 0.00059808 34403 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 40.796 39.406 0 49.573 0 56.251 67.685 37 0 46 0 56 65 1 0 1 0 1 1 2819.7 14369 1412 13845 33451;33452 38863;38864 38864 2 MEFAELIK Acetyl (Protein N-term) 1021.5154 0.51541885 3393 Q9Z2D0 Mtmr9 Myotubularin-related protein 9 yes yes 1 0 0 0 5 0 1 94.83 94.83 2 0.045447 35325 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.426 30.272 15.022 0 0 9.837 0 9.594 14 0 0 9 0 9 1 0 0 1 0 1 516.04 14370 3393 13846 33453 38865 38865 1 MEFLLGNPFSTPVGQCLEK Acetyl (Protein N-term) 2208.0595 0.059512074 2058 Q5SRX1;Q5SXA5;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 1 0 0 0 13 0 1 111.6 111.6 3 2.3239E-08 44483 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.672 36.832 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 3026.6 14371 2058 13847 33454 38866 38866 1 MEFPEQEK Unmodified 1036.4535 0.45354688 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 5 0 1 54.386 54.386 3 0.0060335 18104 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.877 28.07 29.904 27.776 0 0 37.384 38.375 28 28 0 0 37 37 1 1 0 0 1 1 4166.5 14372 1424 13848 33455 38867 38867 1 MEGASFGAGR Acetyl (Protein N-term) 1023.4444 0.44437918 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 1 0 0 0 2.5 0.5 1 1 52.602 52.602 2 5.1217E-05 17791 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.368 56.843 0 31.675 14.646 17.442 34.044 20.916 0 30 14 17 34 20 0 3 1 2 3 2 28419 14373 2638 13849 33456;33457 38868;38869;38870 38869 3 MEGGAYGAGK Acetyl (Protein N-term) 981.42258 0.4225811 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 1 0 0 0 6.67 4.5 1 1 1 50.315 50.315 2 5.7812E-05 16309 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.066 34.29 168.24 94.891 137.15 224.56 219.4 171.76 158 102 139 223 222 167 2 2 2 3 2 2 60337 14374 1235 13850 33458;33459;33460 38871;38872;38873 38873 3 MEGGAYGAGK Acetyl (Protein N-term);Oxidation (M) 997.4175 0.41749572 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 1 0 1 0 4 0 2 40.512 40.512 2 0.00014657 14033 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.058 60.904 39.701 0 0 0 48.116 0 37 0 0 0 46 0 1 0 0 0 1 0 3802.9 14375 1235 13850 33461;33462 38874;38875 38875 59 2 MEGHDPKEPEQLR Acetyl (Protein N-term) 1606.741 0.74095513 626 B2RXM2;J3QNY1 Gm6793;Gm9242 yes no 1 0 0 1 1 0 1 41.664 41.664 3 0.000468 11848 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.092 22.953 30.044 0 0 34.976 0 39.442 28 0 0 32 0 37 1 0 0 1 0 1 7788.7 14376 626 13851 33463 38876 38876 1 MEGNAEESTLFCFAVR Unmodified 1859.8182 0.81821917 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 3.56 1 1 1 76.981 76.981 3 0.0012766 28198 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.053 31.457 0 38.068 77.784 0 57.278 37.808 0 37 74 0 56 37 0 1 1 0 1 1 4359.1 14377 2185 13852 33464;33465;33466 38877;38878;38879 38878 3 MEGPLSVFGDR Acetyl (Protein N-term) 1248.5809 0.58087266 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 1 0 0 0 7.33 4.03 1 1 1 87.497 87.497 2 0.0023951 33171 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.683 41.457 0 14.755 8.4445 9.1646 8.993 0 0 14 9 9 9 0 0 1 1 1 1 0 3074.6 14378 1356 13853 33467;33468;33469 38880;38881;38882 38880 3 MEGYHKPDQQK Acetyl (Protein N-term) 1401.6347 0.63469914 1537 P40142;E0CY51 Tkt Transketolase yes no 1 0 0 1 9 4 1 1 40.666 40.666 3 2.328E-08 11661 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.676 41.651 69.404 77.312 142.4 67.634 116.11 0 65 74 139 65 111 0 1 1 2 1 1 0 20948 14379 1537 13854 33470;33471 38883;38884 38883 2 MEGYSEEASLLR Acetyl (Protein N-term) 1425.6446 0.64459513 806 E0CYK1 Synpo yes yes 1 0 0 0 1.5 0.5 1 1 73.222 73.222 2 4.5471E-13 26554 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.06 87.986 20.387 0 0 39.234 28.359 0 19 0 0 38 28 0 1 0 0 2 1 0 8063.8 14380 806 13855 33472;33473 38885;38886 38886 2 MEIGLPDEK Unmodified 1030.5005 0.50049707 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7.75 3.11 1 1 1 1 63.975 63.975 2 3.5412E-05 22792 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.71 73.165 340.85 298.34 202.74 240.52 284.3 293.57 320 301 199 236 292 283 4 4 2 4 4 4 112700 14381 1554 13856 33474;33475;33476;33477 38887;38888;38889;38890;38891 38891 5 MELGELLYNK Acetyl (Protein N-term) 1250.6217 0.62167484 3287 Q9QZB9;H3BJ75 Dctn5 Dynactin subunit 5 yes no 1 0 0 0 5.5 0.5 1 1 95.432 95.432 2 3.5448E-05 35430 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.346 25.174 9.657 0 0 0 0 20.254 9 0 0 0 0 19 1 0 0 0 0 1 1276.8 14382 3287 13857 33478;33479 38892;38893 38892 2 MELITILEK Acetyl (Protein N-term) 1130.6257 0.62569758 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 1 0 0 0 10 3 1 1 108.68 108.68 2 0.00060737 44122 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.598 13.588 9.5934 11.536 47.966 5.465 8.9468 17.867 9 12 45 5 9 17 2 2 2 1 2 3 8445.6 14383 1798 13858 33480;33481 38894;38895;38896;38897 38896 4 MELQEIQLK Unmodified 1130.6005 0.60054547 782;926;757;209 P21107;A0A0R4J1P2;D3YVR0;D3Z2H9;D3Z6I8;E9Q7Q3 Tpm3;Tpm3-rs7 Tropomyosin alpha-3 chain no no 0 0 0 0 9 2.83 2 1 67.998 67.998 2;3 0.0013008 22943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.7 0 99.576 122.03 46.336 77.123 175.62 174.08 93 121 46 74 177 168 1 2 1 1 3 3 20687 14384 209;757;782;926 13859 33482;33483;33484 38898;38899;38900 38898 3 MELQETIK Unmodified 990.50558 0.50558245 2949 Q9CQZ5;A0A2R8W6V1 Ndufa6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 0 0 5.5 0.5 1 1 57.59 57.59 3 0.002461 18920 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.948 26.748 39.079 55.995 57.035 0 0 49.036 37 56 56 0 0 46 1 1 1 0 0 1 2755 14385 2949 13860 33485;33486 38901;38902 38902 2 MELSADYLR Acetyl (Protein N-term) 1138.5329 0.53285983 2385 Q8BGS2 Bola2 BolA-like protein 2 yes yes 1 0 0 0 3 0 1 75.583 75.583 2 0.037993 28383 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.283 31.043 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1881 14386 2385 13861 33487 38903 38903 1 MELSESVQR Acetyl (Protein N-term) 1119.523 0.52302343 2165 Q63829 Commd3 COMM domain-containing protein 3 yes yes 1 0 0 0 1 0 1 56.013 56.013 2 0.028413 17623 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.972 16.634 29.87 0 29.298 19.021 0 29.848 28 0 28 19 0 28 1 0 1 1 0 1 2151.7 14387 2165 13862 33488 38904 38904 1 MELVEVLK Acetyl (Protein N-term) 1001.5467 0.54671898 219 Q7TMF3;A0A0R4J275;F6RBR6 Ndufa12 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 yes no 1 0 0 0 8 3.56 1 1 1 96.541 96.541 2 0.011684 35585 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.027 18.691 36.303 14.82 34.666 6.4455 20.624 0 34 14 33 6 20 0 2 1 2 1 2 0 13002 14388 219 13863 33489;33490;33491 38905;38906;38907 38905 3 MENAHTK Acetyl (Protein N-term) 871.3858 0.38580166 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 1 0 0 0 3 0 1 30.806 30.806 2 0.051631 7776 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.039 68.184 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14389 1242 13864 33492 38908 38908 1 MENEFTYEDYETTAK Acetyl (Protein N-term) 1911.772 0.77204006 1440 Q543K9;P23492;A0A2I3BS22 Pnp Purine nucleoside phosphorylase yes no 1 0 0 0 2 0 1 74.189 74.189 3 0.00032702 26898 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.318 35.047 9.3611 0 49.725 0 0 0 9 0 46 0 0 0 1 0 1 0 0 0 3697.6 14390 1440 13865 33493 38909 38909 1 MEPGPDGPAAPGPAAIR Acetyl (Protein N-term) 1644.793 0.7929907 2181 Q64674 Srm Spermidine synthase yes yes 1 0 0 0 2 0.816 1 1 1 61.592 61.592 2 2.3596E-05 20393 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.632 57.429 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 4236.7 14391 2181 13867 33494;33495;33496 38910;38911;38912 38910 3 MEPLNNLQVAVK Deamidation (N) 1355.7119 0.71188683 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 1 0 0 6 0 1 68.853 68.853 3 0.0097157 24211 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.495 30.938 59.317 0 129.54 0 91.95 155.14 56 0 120 0 93 148 1 0 1 0 1 1 3165.3 14392 1203;3123 13868 33497 38913 38913 326;327 1 MEPLNNLQVAVK Unmodified 1354.7279 0.72787125 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 8.5 0.5 2 2 68.783 68.783 2;3;4 3.2414E-12 22745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.39 90.428 238.68 43.219 84.118 147.16 128.07 233.83 223 46 84 139 130 222 2 1 2 2 3 3 44320 14393 1203;3123 13868 33498;33499;33500;33501 38914;38915;38916;38917 38914 4 MEPQWVPISWVY Unmodified 1533.7326 0.73262227 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 8 0 1 104.04 104.04 2 0.0043447 36349 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.161 43.001 0 0 4.1442 4.125 0 0 0 0 4 4 0 0 0 0 1 1 0 0 686.59 14394 3241 13869 33502 38918 38918 1 MEPSLATGGSETTR Acetyl (Protein N-term) 1477.6719 0.67187251 1851 P97441;S4R1P0 Slc30a3 Zinc transporter 3 yes no 1 0 0 0 1.5 0.5 1 1 53.824 53.824 2 7.9784E-31 16612 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.27 100.53 12.754 0 20.51 3.1698 5.8066 9.4283 12 0 19 3 6 9 2 0 1 1 1 1 12097 14395 1851 13870 33503;33504 38919;38920 38919 2 MEQDEYALR Unmodified 1153.5074 0.50737336 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 3 0 1 48.518 48.518 3 0.034543 15982 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.282 14.77 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 1396.7 14396 2834 13871 33505 38921 38921 1 MEQELGDEEYTGVEATEAR Unmodified 2155.9216 0.92155785 1996 Q3UMB5 Smcr8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog yes yes 0 0 0 0 1.5 0.5 1 1 59.88 59.88 3 7.3466E-07 19497 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.453 61.17 9.657 0 0 9.6812 8.2818 20.018 9 0 0 9 9 19 1 0 0 1 1 1 4378.4 14397 1996 13872 33506;33507 38922;38923 38922 2 MEQVNELK Acetyl (Protein N-term) 1031.4957 0.49574604 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 1 0 0 0 3.5 0.5 1 1 63.471 63.471 2 0.0080323 22450 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.038 58.588 59.859 19.744 66.772 46.51 46.856 49.036 56 19 65 47 46 46 1 1 2 2 1 1 23483 14398 2092 13873 33508;33509 38924;38925 38925 2 MERSEELNK Oxidation (M) 1150.5288 0.52883709 1111 G8JL83 Yrdc yes yes 0 0 1 1 6 0 1 54.202 54.202 3 0.0083422 17286 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.688 8.6004 78.278 131.75 77.291 94.634 128.02 105.08 74 130 83 93 130 102 1 1 1 1 1 1 38723 14399 1111 13874 33510 38926 38926 51 1 MESDLDVADR Unmodified 1149.4972 0.49720261 2670 Q8R570;B2FDF6;I7HFU4;I7HPB1 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 2 0.816 1 1 1 50.82 50.82 2 5.9296E-05 17091 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.93 69.781 99.659 84.379 57.074 39.227 101.62 134.61 93 84 56 37 102 129 2 2 1 1 2 3 25612 14400 2670 13875 33511;33512;33513 38927;38928;38929 38929 3 MESELEALAPR Acetyl (Protein N-term) 1286.6177 0.61765209 2995 Q9CYS6 Uncharacterized protein C2orf72 homolog yes yes 1 0 0 0 2 0 1 81.727 81.727 2 0.0068085 28531 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.064 41.069 0 0 0 0 2.9212 6.3126 0 0 0 0 3 6 0 0 0 0 1 1 388.02 14401 2995 13876 33514 38930 38930 1 MESGIEPSVDLETLDER Unmodified 1918.883 0.8829875 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 3 0 1 71.634 71.634 3 4.9464E-06 26648 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.783 55.529 0 29.792 0 0 17.841 59.187 0 28 0 0 19 56 0 1 0 0 1 1 3255.1 14402 3079 13877 33515 38931 38931 1 MESGPAVCCQDPR Acetyl (Protein N-term) 1547.6167 0.61668259 2679 Q8VBY2 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes yes 1 0 0 0 1 0 1 47.163 47.163 2 0.00051417 14025 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.836 47.883 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1348.7 14403 2679 13878 33516 38932 38932 1 MESPIPILPLPTPDAETEK Unmodified 2077.0653 0.065308958 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7 Sept5 Septin-5 no no 0 0 0 0 7.71 3.41 3 1 1 2 87.536 87.536 3;4 3.0932E-11 34378 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.53 89.937 207.49 55.169 132.81 244.27 168.05 85.609 194 56 130 232 167 84 5 2 4 6 5 3 56423 14404 410;3398 13879 33517;33518;33519;33520;33521;33522;33523 38933;38934;38935;38936;38937;38938;38939;38940;38941;38942 38941 10 MESYDIIANQPVVIDNGSGVIK Acetyl (Protein N-term) 2403.1992 0.19917668 2672 Q8R5C5 Actr1b Beta-centractin yes yes 1 0 0 0 4 0 1 90.682 90.682 3 5.0488E-10 33854 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.81 25.218 0 0 6.492 0 4.184 0 0 0 6 0 4 0 0 0 1 0 1 0 796.86 14405 2672 13880 33524 38943 38943 1 MESYDIIANQPVVIDNGSGVIK Acetyl (Protein N-term);Deamidation (N) 2404.1832 0.18319226 2672 Q8R5C5 Actr1b Beta-centractin yes yes 1 1 0 0 4 0 1 93.175 93.175 3 1.0424E-18 34126 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.059 36.937 0 9.576 0 9.6131 11.902 6.0564 0 9 0 9 12 6 0 1 0 1 1 1 2667.3 14406 2672 13880 33525 38944 38944 964 1 MESYDVIANQPVVIDNGSGVIK Acetyl (Protein N-term);Deamidation (N) 2390.1675 0.1675422 1691 P61164 Actr1a Alpha-centractin yes yes 1 1 0 0 3.5 0.5 1 1 90.136 90.136 3 4.2147E-16 33751 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.055 45.588 6.4205 6.384 2.9341 30.164 14.09 6.2312 6 6 3 28 15 6 1 1 1 2 2 1 4748.2 14407 1691 13881 33526;33527 38945;38946 38946 654 2 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term) 2456.0326 0.032564859 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23;H3BJ43;A0A286YE41 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 1 0 0 0 1 0 1 72.755 72.755 3 0.00018866 24695 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.089 41.095 29.865 0 30.145 0 0 0 28 0 28 0 0 0 1 0 1 0 0 0 2531.7 14408 613 13882 33528 38947 38947 1 METEQPEETFPNTETNGEFGK Acetyl (Protein N-term);Deamidation (N) 2457.0166 0.016580444 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23;H3BJ43;A0A286YE41 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 1 1 0 0 1.6 0.49 2 3 75.36 75.36 3;4 8.6504E-12 27189 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.122 71.094 37.436 14.265 55.494 38.433 104.24 47.71 35 15 52 37 102 46 2 2 2 3 3 1 28352 14409 613 13882 33529;33530;33531;33532;33533 38948;38949;38950;38951;38952 38950 177 5 METILEQQR Acetyl (Protein N-term) 1188.5809 0.58087266 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 1 0 0 0 2.5 0.5 1 1 69.865 69.865 2 0.00089322 25634 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.04 25.118 0 20.216 0 0 0 40.508 0 19 0 0 0 38 0 1 0 0 0 1 301110 14410 3066 13883 33534;33535 38953;38954 38954 2 MEVLATDTASQQER Acetyl (Protein N-term);Oxidation (M) 1635.741 0.74101471 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 1 0 1 0 1 0 1 49.321 49.321 2 9.3766E-22 14751 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.123 54.676 0 3.192 0 0 9.2034 6.1334 0 3 0 0 9 6 0 1 0 0 1 1 3249.3 14411 3360 13884 33536 38955 38955 202 1 MEVLATDTASQQER Acetyl (Protein N-term) 1619.7461 0.74610008 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 1 0 0 0 2 0.816 1 1 1 66.436 66.436 2 3.0342E-150 22255 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 195.83 163.61 39.402 37.466 18.501 19.143 27.74 19.462 37 38 19 19 28 19 2 2 1 1 1 1 75405 14412 3360 13884 33537;33538;33539 38956;38957;38958;38959 38956 4 MEYLSLMHAVVR Unmodified 1447.7316 0.73157641 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 10 0 1 72.191 72.191 3 0.00012028 21574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.314 59.463 39.468 46.283 0 0 0 69.29 37 46 0 0 0 65 1 1 0 0 0 1 3721.6 14413 3193 13885 33540 38960 38960 1 MFAIYDGFEGFANGQIK Unmodified 1906.8924 0.89237039 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 8 1 1 1 90.637 90.637 3 0.00025514 32070 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.403 35.265 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1041 14414 2507 13886 33541;33542 38961;38962 38962 2 MFAIYDGFEGFANGQIK Deamidation (N) 1907.8764 0.87638598 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 1 0 0 8 0 1 91.019 91.019 3 1.2783E-05 33014 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.417 51.767 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 2723.5 14415 2507 13886 33543 38963 38963 937 1 MFASFPTTK Unmodified 1028.5001 0.50010314 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 10.2 3.31 1 1 2 2 2 2 67.184 67.184 2;3 2.0292E-12 24367 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 176.79 56.905 3015.7 1570.1 3309.1 3035.5 2633.6 3350.1 2833 1598 3248 3000 2651 3212 7 11 9 13 9 11 1797000 14416 2735 13887 33544;33545;33546;33547;33548;33549;33550;33551;33552;33553 38964;38965;38966;38967;38968;38969;38970;38971;38972;38973;38974;38975;38976;38977;38978 38976 15 MFASFPTTK Oxidation (M) 1044.495 0.49501776 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 1 0 10.7 0.943 2 1 60.625 60.625 2;3 0.0089449 17051 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.692 43.372 0 154.52 223.62 164.09 271.77 151.6 0 148 222 167 272 148 0 1 2 2 2 1 13160 14417 2735 13887 33554;33555;33556 38979;38980;38981 38980 182 3 MFDLEANEEVQK Unmodified 1451.6602 0.66024519 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 13 0 1 67.411 67.411 3 2.2057E-06 24731 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.44 78.744 79.402 0 0 108.36 166.46 94.388 74 0 0 102 167 93 1 0 0 1 1 1 7809.3 14418 2322 13888 33557 38982 38982 1 MFDVGGQR Unmodified 908.41744 0.41743614 1330;622;3136 B2RSH2;A2AE32;P20612;Q3V3I2;P50149;F6QPU5;P08752;A0A0A6YWA9;Q9DC51 Gnai1;Gnat2;Gnat1;Gnat3;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-1;Guanine nucleotide-binding protein G(t) subunit alpha-3;Guanine nucleotide-binding protein G(t) subunit alpha-2;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 8 0 1 51.377 51.377 2 0.043135 14495 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.429 49.064 0 208.5 257.07 263.47 402.69 348.82 0 200 260 262 408 338 0 1 1 1 1 1 9770.2 14419 622;1330;3136 13889 33558 38983 38983 1 MFENEFLLLLNSPTIPFR Unmodified 2180.134 0.13399765 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 10.5 0.5 1 1 108.16 108.16 3 6.9154E-06 35450 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.737 55.042 0 0 0 11 0 0 0 0 0 11 0 0 0 0 0 2 0 0 1446.6 14420 816 13890 33559;33560 38984;38985 38985 2 MFESFIESVPLFK Unmodified 1572.7898 0.7898028 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 10.7 1.7 1 1 1 101.22 101.22 3 2.7683E-07 35968 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.18 87.337 65.137 66.667 26.257 38.876 9.414 9.594 61 67 26 37 9 9 3 4 2 3 1 1 12407 14421 68 13891 33561;33562;33563 38986;38987;38988;38989;38990 38986 5 MFGGSGTSSRPSSNR Unmodified 1526.6896 0.68958826 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 1 9 0 1 33.091 33.091 3 0.0028687 5944 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.938 40.262 0 0 14.749 8.958 0 0 0 0 14 9 0 0 0 0 1 1 0 0 2086.8 14422 1423 13892 33564 38991 38991 1 MFGIDKDAIVQAVK Unmodified 1533.8225 0.82249991 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 11.1 1.46 1 2 1 1 2 76.025 76.025 3;4 5.9544E-07 28677 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.98 85.395 660.66 400.02 680.23 352.39 343.86 612.73 620 426 667 343 343 583 6 6 6 5 4 6 112870 14423 1537 13893 33565;33566;33567;33568;33569;33570;33571 38992;38993;38994;38995;38996;38997;38998;38999 38999 8 MFGSNLDLMDPGQ Unmodified 1423.6112 0.61118651 68 A0A0A6YX73;Q8K1M3;P12367 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 7 0 1 88.872 88.872 2 0.0095112 32809 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.783 37.54 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14424 68 13894 33572 39000 39000 1 MFIFYGNK Unmodified 1018.4946 0.49462383 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 3.75 4.76 3 1 75.19 75.19 2;3 0.00068961 25865 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.79 81.342 386.11 457.78 464.04 395.19 530.9 194.32 363 462 465 396 523 186 3 6 4 6 2 2 63947 14425 1401 13895 33573;33574;33575;33576 39001;39002;39003;39004;39005;39006 39001 6 MFIGGLSWDTSK Unmodified 1340.6435 0.64347291 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 12 1 1 1 80.916 80.916 2 6.1436E-09 24998 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 115.78 88.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5063.7 14426 668;3370 13896 33577;33578 39007;39008 39007 2 MFIGGLSWDTSKK Unmodified 1468.7384 0.73843593 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 1 11.3 0.471 2 1 72.091 72.091 3;4 4.5502E-14 18636 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.65 88.146 257.76 38.45 107.41 156.3 0 0 241 46 102 143 0 0 2 1 1 1 0 0 13889 14427 668;3370 13897 33579;33580;33581 39009;39010;39011 39011 3 MFIGGLSWDTTK Unmodified 1354.6591 0.65912298 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6;A0A0G2JFL4 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 11.8 1.3 1 1 2 81.306 81.306 2;3 1.769E-05 25182 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.38 73.76 148 61.655 140.54 142.21 108.6 149.34 139 65 139 139 111 143 2 1 2 3 2 3 35039 14428 2079 13898 33582;33583;33584;33585 39012;39013;39014;39015 39013 4 MFIGGLSWDTTKK Unmodified 1482.7541 0.754086 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;E9Q5B6;A0A0G2JFL4 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 1 11.5 0.5 1 1 72.627 72.627 3;4 0.00012591 18749 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.734 60.342 133.18 76.16 111.76 0 96.117 125.18 127 80 108 0 96 120 2 1 1 0 1 1 26733 14429 2079 13899 33586;33587 39016;39017 39017 2 MFILQSK Unmodified 865.47316 0.47316011 2927 Q9CQF7;Q9CWM4 Pfdn1 Prefoldin subunit 1 yes no 0 0 0 0 6.5 5.5 1 1 67.817 67.817 2 0.021687 16849 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.12 47.557 211.04 188.95 257.09 192.62 276.01 263.95 199 195 257 195 281 255 2 2 2 2 2 2 29654 14430 2927 13900 33588;33589 39018;39019 39019 2 MFLITNSPSSFVDK Unmodified 1584.7858 0.78578005 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 10.5 0.5 1 1 80.783 80.783 3 1.2454E-07 24924 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.72 92.06 59.549 54.831 44.107 46.588 56.436 120 56 56 46 46 56 120 1 1 1 1 1 1 19256 14431 1977 13901 33590;33591 39020;39021 39021 2 MFLMSMPDLAPLSK Unmodified 1579.7812 0.78122872 3410 yes no 0 0 0 0 5 0 1 44.489 44.489 4 0.020343 13159 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.661 7.5982 69.414 24.53 34.779 77.066 92.692 0 65 28 37 74 92 0 1 1 1 1 1 0 2876.6 + 14432 3410 13902 33592 39022 39022 1 MFLVNSFLK Acetyl (Protein N-term) 1139.6049 0.60490256 143 A0A0R4IZW8;O88456 Capns1 Calpain small subunit 1 yes no 1 0 0 0 9.25 4.82 1 1 1 1 111.78 111.78 2 2.3041E-05 36095 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.392 53.7 24.607 30.25 6.1742 57.411 7.9749 46.752 23 30 6 53 8 45 2 2 1 4 1 3 21318 14433 143 13903 33593;33594;33595;33596 39023;39024;39025;39026;39027;39028 39025 6 MFMAAAGR 2 Oxidation (M) 885.38369 0.38369317 160 A0A0R4J059;Q3TA59 Jmjd8 JmjC domain-containing protein 8 yes no 0 0 2 0 1 0 1 57.311 57.311 2 0.054384 18308 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.688 20.97 39.613 17.545 0 0 0 20.254 37 19 0 0 0 19 1 1 0 0 0 1 38963 14434 160 13904 33597 39029 39029 15;16 1 MFPAFGFGAR Unmodified 1099.5273 0.52732094 2428 Q9D6C8;Q8BLR2;A0A1L1SU07 Cpne4 Copine-4 yes no 0 0 0 0 6.5 5.5 1 1 77.284 77.284 2 2.3507E-28 20728 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 189.88 126.23 0 77.131 166.33 0 229.92 66.878 0 74 158 0 222 65 0 1 2 0 2 1 19928 14435 2428 13905 33598;33599 39030;39031 39031 2 MFQTLIQK Unmodified 1007.5474 0.54738768 342 A0A1Y7VLP0;P56379 Mp68 6.8 kDa mitochondrial proteolipid yes no 0 0 0 0 8.5 4.39 1 1 1 1 70.268 70.268 2;3 0.0048732 20101 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.38 41.583 469 61.927 111.24 129.67 17.145 403.52 438 69 111 125 19 379 2 1 1 2 1 3 46123 14436 342 13906 33600;33601;33602;33603 39032;39033;39034;39035 39034 4 MFSEADACELWIDEK Unmodified 1842.7804 0.78043668 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 82.055 82.055 3 0.00035162 31141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.374 44.993 29.744 27.331 27.215 28.982 0 0 28 28 28 28 0 0 1 1 1 1 0 0 3550.3 14437 2148 13907 33604 39036 39036 1 MFSWVSK Acetyl (Protein N-term) 925.43677 0.4367746 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 1 0 0 0 9 0 1 89.233 89.233 2 0.025296 31498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.426 35.057 20.319 13.526 0 0 15.91 24.064 19 14 0 0 16 23 1 1 0 0 1 1 2709.4 14438 3353 13908 33605 39037 39037 1 MFTIDPK Unmodified 850.42588 0.42587556 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 10 2.16 1 1 1 64.712 64.712 3 0.014537 20849 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.268 38.313 187.05 196.92 333.72 185.99 242.75 164.51 176 195 324 185 241 157 3 3 4 3 3 2 8344.2 14439 1424 13909 33606;33607;33608 39038;39039;39040;39041;39042;39043 39038 6 MFVDLNPDSDK Unmodified 1279.5755 0.57545293 1428;1427 P21279;P21278 Gnaq;Gna11 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-11 no no 0 0 0 0 6.5 0.5 1 1 69.981 69.981 3 0.0054528 24767 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.569 31.036 46 29.315 28.537 0 19.874 0 46 28 28 0 19 0 1 1 1 0 1 0 5853.1 14440 1428;1427 13910 33609;33610 39044;39045 39044 2 MFVGGLSWDTSKK Unmodified 1454.7228 0.72278587 1906 Q20BD0;Q80XR6;Q99020 Hnrnpab Heterogeneous nuclear ribonucleoprotein A/B yes no 0 0 0 1 11 0 1 69.091 69.091 3 0.011321 19692 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.641 16.694 98.448 89.819 149.24 112.43 0 0 93 93 148 111 0 0 1 1 1 1 0 0 14030 14441 1906 13911 33611 39046 39046 1 MFVLDEADEMLSR Unmodified 1554.7058 0.70581517 1345;1679 P10630;Q8BTU6;A0A338P6X5;E9Q561;P60843 Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 8 3.56 1 1 1 86.171 86.171 2;3 0.00011315 32952 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.552 76.76 20.265 0 39.725 37.93 27.959 0 19 0 38 37 28 0 1 0 2 2 1 0 5729.9 14442 1345;1679 13912 33612;33613;33614 39047;39048;39049;39050 39048 4 MFVLTVAAENQVPLAK Deamidation (N) 1730.9277 0.92769326 727 D3YYT0;P15116 Cdh2 Cadherin-2 yes no 0 1 0 0 11 0 1 84.273 84.273 3 0.0012989 26316 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.75 44.821 0 0 40.034 0 38.702 0 0 0 37 0 37 0 0 0 1 0 1 0 3538.7 14443 727 13913 33615 39051 39051 202 1 MGDHLWIAR Unmodified 1097.544 0.54403364 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 9 2.1 1 2 1 1 53.51 53.51 2;3 0.00029315 15703 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.43 76.508 621.46 437.76 498.55 327.37 238.89 429.91 584 453 501 324 241 407 7 6 6 5 4 5 159330 14444 1383 13914 33616;33617;33618;33619;33620 39052;39053;39054;39055;39056;39057;39058 39054 7 MGESDDSILR Unmodified 1121.5023 0.50228798 2938 Q9CQR2 Rps21 40S ribosomal protein S21 yes yes 0 0 0 0 3.5 0.5 1 1 51.46 51.46 2 0.0019257 17333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.136 59.238 118.66 43.651 37.066 0 104.08 75.914 111 46 37 0 102 74 2 1 1 0 2 2 14066 14445 2938 13916 33621;33622 39059;39060 39059 2 MGFPPGAAQALVLQVFK Unmodified 1772.9647 0.96474747 2645 Q8R1N4 Nudcd3 NudC domain-containing protein 3 yes yes 0 0 0 0 8 4.97 1 1 1 96.966 96.966 3 2.3037E-31 33551 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 118.24 89.434 34.095 42.02 22.101 29.287 18.867 53.828 32 42 23 28 19 51 1 2 1 1 1 2 3088.9 14446 2645 13917 33623;33624;33625 39061;39062;39063;39064 39061 4 MGFPSNIVDSAAENMIK Unmodified 1822.8594 0.8593557 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 7 0 1 84.535 84.535 3 2.923E-06 30702 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.59 59.787 0 0 30.296 0 0 29.848 0 0 28 0 0 28 0 0 1 0 0 1 2434.9 14447 3397 13918 33626 39065 39065 1 MGFPSNIVDSAAENMIK Deamidation (N) 1823.8434 0.84337129 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 1 0 0 9.5 2.06 2 1 1 84.199 84.199 3 0.00018404 32853 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.673 47.095 0 0 67.344 67.031 0 0 0 0 65 65 0 0 0 0 2 2 0 0 5533.9 14448 3397 13918 33627;33628;33629;33630 39066;39067;39068;39069 39069 1145 4 MGGFHWVPR Unmodified 1085.5229 0.52290427 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 0 9.5 0.5 1 1 54.361 54.361 3 0.00059149 13425 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.439 56.496 138.27 76.649 188.03 153.55 131.56 95.384 130 83 185 153 134 93 1 1 2 2 1 1 19152 14449 450 13919 33631;33632 39070;39071 39071 2 MGGSSGALYGLFLTAAAQPLK Unmodified 2052.0714 0.071397389 2680 Q8VC30 Dak Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing);ATP-dependent dihydroxyacetone kinase;FAD-AMP lyase (cyclizing) yes yes 0 0 0 0 12 0 1 93.49 93.49 3 0.0512 26850 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 28.325 17.381 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1132.4 14450 2680 13920 33633 39072 39072 1 MGHAGAIIAGGK Unmodified 1081.5702 0.57024839 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 45.334 45.334 3 0.00013405 11980 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.417 60.331 325.33 274.63 272.1 89.342 377.93 236.54 306 283 268 88 373 227 3 3 2 1 3 2 51002 14451 3337 13921 33634;33635;33636 39073;39074;39075 39073 3 MGIGGLDK Unmodified 789.40547 0.40547447 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 13 0 1 56.627 56.627 2 0.048279 19531 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.107 15.026 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14452 1554 13922 33637 39076 39076 1 MGIGGLDKEFSDIFR Unmodified 1683.829 0.82904185 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 1 10 2.16 1 1 1 83.743 83.743 3 5.4358E-05 29387 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.566 57.417 501.62 341.53 599.25 191.61 197.07 322.7 472 361 583 186 199 308 3 3 4 2 1 1 57976 14453 1554 13923 33638;33639;33640 39077;39078;39079;39080 39079 4 MGIYTGAK Unmodified 839.42112 0.42112454 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 10.5 0.5 1 1 52.246 52.246 2 0.0089869 12631 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.41 60.466 187.64 0 203.03 194.55 161.82 163.81 176 0 195 195 167 158 1 0 1 2 1 1 15619 14454 2507 13924 33641;33642 39081;39082 39081 2 MGIYVGAK Unmodified 837.44186 0.44185998 1357 P12382;A0A1W2P7T1 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 0 10 0 1 57.667 57.667 2 0.008453 15031 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102.81 65.785 137.86 145.66 150.7 0 148.8 174.84 130 148 148 0 148 168 1 1 1 0 1 1 12026 14455 1357 13925 33643 39083 39083 1 MGLALSSLNK Unmodified 1032.5638 0.56376603 317 Q8BJU0;A0A1W2P6P1 Sgta Small glutamine-rich tetratricopeptide repeat-containing protein alpha yes no 0 0 0 0 12.5 0.5 1 1 67.523 67.523 2;3 0.00011116 16899 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.55 41.782 138.21 147.71 90.034 165.31 107.04 173.9 130 149 93 158 111 166 2 2 1 2 1 2 12595 14456 317 13926 33644;33645 39084;39085 39084 2 MGLLAVLR Unmodified 871.53134 0.53134369 2473 Q8BWW3;Q9CYR6 Pgm3 Phosphoacetylglucosamine mutase yes no 0 0 0 0 6.5 5.5 1 1 75.982 75.982 2 0.018681 26417 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.027 32.676 20.387 0 0 29.565 111.8 116.2 19 0 0 28 112 112 1 0 0 1 2 2 9509.6 14457 2473 13927 33646;33647 39086;39087 39086 2 MGLVDQLVEPLGPGIK Unmodified 1664.9171 0.91712858 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 8 0 1 87.421 87.421 3 0.0036997 31591 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.873 34.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14458 2435 13928 33648 39088 39088 1 MGLVSCGPPPQLPLAQIFGR Unmodified 2137.1176 0.11763608 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 7.75 5.26 3 2 2 1 93.192 93.192 3;4 2.0541E-22 33192 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.91 109.43 68.302 42.112 114.14 51.688 72.032 12.281 65 43 110 51 69 12 6 3 7 4 3 3 82491 14459 2125 13929 33649;33650;33651;33652;33653;33654;33655;33656 39089;39090;39091;39092;39093;39094;39095;39096;39097;39098;39099;39100;39101;39102;39103 39094 15 MGLVSCGPPPQLPLAQIFGRPR Unmodified 2390.2715 0.27151096 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 1 1 0 3 86.722 86.722 3;4 1.4521E-16 29505 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.88 90.627 19.062 28.198 37.724 49.123 29.288 0 18 28 38 47 28 0 2 2 2 2 1 0 9167.1 14460 2125 13930 33657;33658;33659 39104;39105;39106;39107 39105 4 MGPGAASGGERPNLK Unmodified 1440.7143 0.71434645 3040 Q9D1G1 Rab1b Ras-related protein Rab-1B yes yes 0 0 0 1 9.33 2.62 1 1 1 42.373 42.373 3 9.8696E-05 11009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.582 69.776 127.26 167.26 110.4 72.413 157.37 133.02 120 167 111 74 158 129 2 2 1 1 2 2 7322.9 14461 3040 13931 33660;33661;33662 39108;39109;39110 39108 3 MGPGATAGGAEK Unmodified 1045.4862 0.48624399 1742;2065 P62821;Q5SW88;Q5SW87;Q5SW86 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 0 6 0 1 40.655 40.655 2 3.2178E-06 11012 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106 80.749 59.741 25.146 36.959 28.401 0 0 56 28 37 28 0 0 1 1 1 1 0 0 4011.9 14462 1742;2065 13932 33663 39111 39111 1 MGPGIGAILER Unmodified 1112.6012 0.60121417 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 7 0 1 67.849 67.849 2 0.0025896 22932 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.816 49.654 29.281 26.042 106.21 54.878 0 0 28 28 102 56 0 0 1 1 1 1 0 0 2758.6 14463 521 13933 33664 39112 39112 1 MGPGSGPGALAK Unmodified 1041.5277 0.52771487 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8 0 1 51.084 51.084 2 6.5114E-05 14386 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.883 36.309 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14464 1275 13934 33665 39113 39113 1 MGPSGGEGVEPER Unmodified 1300.5718 0.57176453 2140 Q61792;A2A6G9;A2A6H0 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 2 0 1 40.077 40.077 2 0.052918 11933 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.077 28.052 14.773 7.9923 35.152 0 0 0 14 9 33 0 0 0 1 1 1 0 0 0 1657.4 14465 2140 13935 33666 39114 39114 1 MGPSGGEGVEPERR Unmodified 1456.6729 0.67287556 2140 Q61792;A2A6G9;A2A6H0 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 1 6.67 4.5 1 1 1 33.93 33.93 3 0.00025298 8698 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.806 48.933 157.79 65.92 115.35 0 48.116 98.072 148 65 111 0 46 92 3 1 3 0 1 2 19396 14466 2140 13936 33667;33668;33669 39115;39116;39117 39116 3 MGTPHLQK Unmodified 910.46947 0.46947171 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 0 9 0 1 41.486 41.486 3 0.053892 9508 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.396 8.5995 0 139.06 210.3 241.17 225.76 200.36 0 134 212 236 233 194 0 1 1 1 1 1 23254 14467 960;1082 13937 33670 39118 39118 1 MGTPYLQK Unmodified 936.47389 0.47388839 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 9.5 0.5 1 1 55.068 55.068 2 0.014634 13728 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.064 29.053 366.19 94.684 229.96 250.02 149.54 382.69 343 93 223 232 148 363 3 1 2 2 1 2 100470 14468 118;1534 13938 33671;33672 39119;39120;39121 39121 3 MGVEAVIALLEATPETPACVVSLR Unmodified 2525.3233 0.32333133 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 10.5 1.89 1 1 2 2 108.4 108.4 3;4 1.8626E-12 44082 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.057 64.068 9.657 9.576 0 9.762 44.221 21.245 9 9 0 9 44 21 2 1 0 2 3 3 9389.3 14469 2507 13939 33673;33674;33675;33676;33677;33678 39122;39123;39124;39125;39126;39127;39128 39128 7 MGVEAVMALLEGTPDTPACVVSLSGNQAVR Unmodified 3071.509 0.50897663 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 10 1.87 1 1 1 1 103.08 103.08 4 1.4111E-14 33244 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.465 59.154 19.06 32.785 27.867 32.222 0 0 18 33 28 31 0 0 1 3 1 2 0 0 10187 14470 1568 13940 33679;33680;33681;33682 39129;39130;39131;39132 39131 4 MGVEIETISPGDGR Acetyl (Protein N-term) 1501.7083 0.70825802 2340 Q80YE1;Q9Z2I2 Fkbp1b Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1B yes no 1 0 0 0 2 0 1 72.618 72.618 2 0.00392 26308 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.368 34.538 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1860.5 14471 2340 13941 33683 39133 39133 1 MHAAYIR Unmodified 860.43269 0.43269228 2754 Q91WD5;D3YXT0;A0A0A6YW30 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 8 0 1 33.651 33.651 3 0.037249 6452 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.056 41.989 49.225 26.473 0 0 0 49.036 46 28 0 0 0 46 1 1 0 0 0 1 1613.8 14472 2754 13942 33684 39134 39134 1 MHDSHLSSDEPK Unmodified 1381.5932 0.59322826 1544;502 A2APL5;A2AQI7;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 4 0.707 1 2 1 34.776 34.776 3;4 9.7185E-05 9012 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.821 72.95 394.17 316.21 243.61 123.7 130.7 242.52 370 326 240 121 130 231 3 4 2 2 2 3 39615 14473 502;1544 13943 33685;33686;33687;33688 39135;39136;39137;39138 39136 4 MHEDINEEWISDK Unmodified 1644.709 0.7089863 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 7.33 4.03 1 1 1 59.063 59.063 3 1.0868E-15 20186 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.84 89.868 99.202 84.256 27.303 89.948 67.591 185.69 93 84 28 83 74 176 3 2 1 1 2 3 16190 14474 2736 13944 33689;33690;33691 39139;39140;39141;39142 39142 4 MHESLMLFDSICNNK Unmodified 1837.8161 0.81611068 1411 P18872;F6WC15;F6W1B2 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 9 0 1 70.982 70.982 3 1.1187E-07 23119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.615 62.979 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14475 1411 13945 33692 39143 39143 1 MHPQYSR Oxidation (M) 933.41269 0.41268512 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 1 0 5 0 1 20.233 20.233 3 0.039405 2845 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.176 53.544 20.211 13.226 18.348 29.51 0 0 19 14 19 28 0 0 1 1 1 1 0 0 1305.7 14476 1055 13946 33693 39144 39144 50 1 MHPQYSR Unmodified 917.41777 0.41777049 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.5 0.5 1 1 26.358 26.358 3 0.0053793 4137 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.407 72.276 137.77 135.68 174.91 150.19 61.236 97.391 130 139 176 148 65 93 2 2 2 2 1 1 10829 14477 1055 13946 33694;33695 39145;39146 39145 2 MHSLLIK Unmodified 840.48914 0.48914452 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 11 0 1 51.585 51.585 3 0.019414 12250 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.672 26.65 0 233.85 268.37 0 370.49 298.57 0 224 261 0 364 290 0 1 1 0 1 1 5669.8 14478 1043 13947 33696 39147 39147 1 MHVEQER Unmodified 927.42325 0.4232498 716 S4R1M2;D3YXK2 Safb Scaffold attachment factor B1 yes no 0 0 0 0 4 0 1 25.815 25.815 3 0.063342 5043 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.767 22.996 20.099 0 48.436 27.717 0 0 19 0 46 28 0 0 1 0 1 1 0 0 1741.6 14479 716 13948 33697 39148 39148 1 MIAEAIPELK Oxidation (M) 1129.6053 0.60529649 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 1 0 6.5 0.5 1 1 68.015 68.015 3 0.0065682 23943 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.65 25.125 39.522 48.204 74.367 88.49 64.299 127.15 37 46 74 84 65 121 1 1 2 2 2 3 10105 14480 1327 13949 33698;33699 39149;39150;39151 39151 69 3 MIAEAIPELK Unmodified 1113.6104 0.61038187 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 7.25 0.829 1 1 2 73.292 73.292 2;3 4.871E-05 24751 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.5 63.889 655.08 544.4 890.53 649.02 692.09 695.77 617 563 883 649 713 670 4 4 6 5 5 4 164810 14481 1327 13949 33700;33701;33702;33703 39152;39153;39154;39155;39156;39157 39156 6 MIAGQVLDINLAAEPK Unmodified 1681.9073 0.90729217 3389 Q9Z204;A0A2I3BRM6 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 7.67 0.471 1 2 80.582 80.582 3;4 2.7014E-05 28934 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.428 71.238 0 58.987 103.56 122.97 107.15 96.336 0 56 102 120 111 93 0 2 2 3 3 2 9899.4 14482 3389 13950 33704;33705;33706 39158;39159;39160 39158 3 MIAGQVLDINLAAEPK Deamidation (N) 1682.8913 0.89130776 3389 Q9Z204;A0A2I3BRM6 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 1 0 0 9 0 1 80.475 80.475 3 0.0091163 27612 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.249 25.296 0 47.49 86.957 0 0 99.138 0 46 83 0 0 93 0 1 1 0 0 1 2545.3 14483 3389 13950 33707 39161 39161 1142 1 MIAILTENYGGK Unmodified 1308.6748 0.67477304 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 10 0 2 76.182 76.182 2;3 0.0021485 23375 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.334 26.902 49.358 29.792 0 40.441 38.702 39.442 46 28 0 37 37 37 1 1 0 1 1 1 25868 14484 3032 13951 33708;33709 39162;39163 39163 2 MIEEAGAIISTR Unmodified 1289.6649 0.66493664 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 9.5 3.5 1 1 66.717 66.717 2;3 0.00016056 24370 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.306 56.12 59.269 73.48 75.361 0 92.609 135.94 56 74 74 0 93 130 1 1 1 0 1 1 16108 14485 852 13952 33710;33711 39164;39165 39165 2 MIFAGIK Unmodified 778.44113 0.4411317 1753 P62897;CON__P62894;P00015 Cycs;Cyct Cytochrome c, somatic;Cytochrome c, testis-specific yes no 0 0 0 0 7 5.49 5 1 4 1 69.982 69.982 2;3 0.0060976 23615 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.79 43.484 3815.9 2376.3 5552.8 3662 4256.8 5037.2 3594 2515 5425 3721 4360 4838 6 5 7 6 7 8 902700 14486 1753 13953 33712;33713;33714;33715;33716;33717;33718;33719;33720;33721;33722 39166;39167;39168;39169;39170;39171;39172;39173;39174;39175;39176;39177;39178 39166 13 MIGFSETAK Unmodified 982.47937 0.4793677 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 59.374 59.374 2 2.9328E-12 17629 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 175.44 120.07 288.01 192.57 620.42 608.22 680.06 704.76 271 204 603 602 700 675 2 2 2 4 4 3 119690 14487 1554 13954 33723;33724;33725;33726;33727 39179;39180;39181;39182;39183;39184 39182 6 MIGGLFIYNHK Unmodified 1291.6747 0.67471346 1836 Q3TWV4;P84091;A0A338P798 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 12 0 1 68.233 68.233 3 6.8935E-09 17194 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 127.4 98.344 252.16 0 0 0 0 305.94 235 0 0 0 0 287 1 0 0 0 0 1 37703 14488 1836 13955 33728 39185 39185 1 MIISELVHNNLR Deamidation (N) 1438.7602 0.76023401 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9;F6YP92;Q0P6A0;A0A0G2JGC2;A0A0G2JFV3;A0A0G2JDE3;A0A0G2JG66;A0A0G2JDF4;A0A0G2JFF5;A0A0G2JDK6;A0A0G2JGM8;Q8JZZ7 Adgrl1;Lphn1;Adgrl2;Lphn2 Latrophilin-1;Latrophilin-2 yes no 0 1 0 0 10 0 1 67.862 67.862 3 0.0086818 19510 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.979 16.019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14489 1127 13956 33729 39186 39186 297 1 MIKPFFHSLCDK Unmodified 1521.7472 0.74722648 1346 P10639 Txn Thioredoxin yes yes 0 0 0 1 8.67 5.44 1 1 1 66.97 66.97 4 0.00084776 24064 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.295 31.61 751.94 252.24 186.11 787.5 427.54 471.03 703 258 186 738 431 444 4 2 2 4 2 3 98036 14490 1346 13957 33730;33731;33732 39187;39188;39189;39190 39187 4 MILLEVNNR Unmodified 1100.6012 0.60121417 2971 Q9CVB6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes yes 0 0 0 0 9.5 0.5 1 1 66.71 66.71 2 0.0034033 21037 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.709 49.763 60.088 0 66.956 75.734 194.6 171.4 56 0 65 74 195 166 1 0 1 1 2 2 42046 14491 2971 13958 33733;33734 39191;39192 39191 2 MINLSVPDTIDER Unmodified 1501.7446 0.74464352 269;2119 A0A1C7CYV0;B1AX58;Q99K51;Q61233 Pls3;Lcp1 Plastin-3;Plastin-2 no no 0 0 0 0 13 0 1 71.881 71.881 3 0.026684 26927 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.941 20.101 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14492 269;2119 13959 33735 39193 39193 1 MIPCDFLIPVQTQHPIR Unmodified 2064.0649 0.064872223 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 11.2 1.17 2 1 1 1 74.634 74.634 3;4 6.8517E-06 22591 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.138 52.184 291.22 87.034 251.31 89.662 143.42 242.15 273 88 237 84 144 231 4 2 3 2 2 5 70957 14493 1316 13960 33736;33737;33738;33739;33740 39194;39195;39196;39197;39198 39195 5 MIPCDFLIPVQTQHPIRK Unmodified 2192.1598 0.15983524 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 1 11.3 1.25 1 1 1 68.377 68.377 4 4.6229E-07 25079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.866 64.668 315.34 98.952 381.71 679.53 439.44 432.29 296 93 372 662 458 413 1 1 1 3 2 1 91892 14494 1316 13961 33741;33742;33743 39199;39200;39201 39201 3 MIPSDLER Unmodified 959.47462 0.47461667 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 5 0 1 54.39 54.39 2 0.015602 18053 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.313 40.313 0 0 0 59.302 101.36 75.992 0 0 0 56 102 74 0 0 0 1 1 1 7632 14495 1579 13962 33744 39202 39202 1 MIQDSGKVNPK Deamidation (N) 1216.6122 0.61217279 270 A0A1D5RLE0;E9QMR2;A0A1D5RMM1;F8VPN7;Q8BIK4 Dock9 Dedicator of cytokinesis protein 9 yes no 0 1 0 1 8 0 1 34.252 34.252 4 0.059523 6707 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.706 15.817 147.62 115.05 159.96 75.262 314.96 109.34 139 120 158 83 308 111 1 1 1 1 1 1 6176.7 14496 270 13963 33745 39203 39203 1 MISGMYLGEIVR Unmodified 1367.6941 0.69412828 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 10.2 1.64 2 1 1 76.902 76.902 2;3 0.0032741 23501 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.694 7.0618 78.867 56.919 58.77 36.444 26.285 68.54 74 56 56 37 28 65 2 2 1 1 1 2 41499 14497 1055 13964 33746;33747;33748;33749 39204;39205;39206;39207 39206 4 MISSYVGENAEFER Unmodified 1630.7297 0.72972174 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 8.4 3.77 2 1 2 63.173 63.173 2;3 0.00010603 22472 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.944 72.935 79.484 139.92 220.04 98.403 176.69 97.08 75 140 214 101 176 93 2 4 3 3 3 1 23232 14498 3028 13965 33750;33751;33752;33753;33754 39208;39209;39210;39211;39212 39211 5 MIVECVMNNATCTR Unmodified 1697.7358 0.73575187 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 9.5 0.5 1 1 66.424 66.424 3 0.00070735 20917 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.727 57.249 0 0 49.772 0 0 59.696 0 0 46 0 0 56 0 0 1 0 0 1 4853.8 14499 1887 13966 33755;33756 39213;39214 39213 2 MIVGTLK Unmodified 760.4517 0.45169638 2267 Q6ZWM4 Lsm8 U6 snRNA-associated Sm-like protein LSm8 yes yes 0 0 0 0 10 0 1 60.256 60.256 2 0.021551 16164 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.614 6.2402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14500 2267 13967 33757 39215 39215 1 MIVTGAAPASPTVLGFLR Unmodified 1799.9968 0.99677588 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 8 4.97 1 1 1 85.078 85.078 3 1.2479E-06 26681 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.464 58.903 29.865 0 30.145 0 19.564 9.0357 28 0 28 0 19 9 1 0 1 0 1 1 26413 14501 2753 13968 33758;33759;33760 39216;39217;39218 39217 3 MIYASSK Unmodified 798.39458 0.39457544 1410;3301;1549 Q9R0P5;P45591;P18760;F8WGL3 Dstn;Cfl2;Cfl1 Destrin;Cofilin-2;Cofilin-1 no no 0 0 0 0 10.7 1.49 2 1 1 1 1 48.584 48.584 2;3 1.4151E-05 10921 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 162.51 51.979 1355.5 731.09 1127.7 1106 673.42 668.96 1273 776 1121 1085 689 637 8 7 7 8 5 4 536530 14502 3301;1549;1410 13969 33761;33762;33763;33764;33765;33766 39219;39220;39221;39222;39223;39224;39225;39226 39224 8 MIYEDYISILSPK Unmodified 1570.7953 0.79528211 1102 Q9QZB0;G5E8E0;F8WH97 Rgs17 Regulator of G-protein signaling 17 yes no 0 0 0 0 8 0 1 88.398 88.398 3 0.00094323 32035 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.088 51.301 20.387 0 0 20.056 37.781 0 19 0 0 19 37 0 1 0 0 1 1 0 2141.6 14503 1102 13970 33767 39227 39227 1 MKDTDSEEEIR Oxidation (M) 1367.5875 0.58747418 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;Q9D6P8;A0A1Y7VK66 Calm1;Calml3 Calmodulin-like protein 3 yes no 0 0 1 1 3.5 0.5 1 1 34.954 34.954 3 0.019192 9831 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.846 38.183 137.75 238.91 492.25 198.35 542.14 213.02 130 241 477 197 534 206 1 2 2 1 2 1 56471 14504 1340 13971 33768;33769 39228;39229 39228 73 2 MKDTDSEEEIR Unmodified 1351.5926 0.59255956 1340 P0DP28;P0DP27;P0DP26;Q3UKW2;Q9D6P8;A0A1Y7VK66 Calm1;Calml3 Calmodulin-like protein 3 yes no 0 0 0 1 4 0 1 40.408 40.408 3 0.00022071 11821 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.273 65.292 0 302.18 0 267.78 344.79 591.39 0 284 0 245 339 564 0 2 0 1 1 2 168780 14505 1340 13971 33770 39230;39231 39231 2 MKEIAEAYLGK Unmodified 1251.6533 0.65330932 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 10.4 1.68 3 2 2 70.789 70.789 2;3;4 2.3055E-05 23232 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.39 54.129 1776.8 1329.4 1979.8 1661.6 1240.2 1817.2 1671 1360 1963 1631 1260 1735 8 9 9 7 6 8 217560 14506 1762 13972 33771;33772;33773;33774;33775;33776;33777 39232;39233;39234;39235;39236;39237;39238;39239;39240;39241;39242 39232 11 MKETAENYLGHTAK Unmodified 1591.7664 0.7664416 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 1 7 0 1 54.5 54.5 4 6.4726E-05 16644 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.311 58.875 0 107.13 83.378 0 102.4 125 0 102 83 0 102 120 0 1 1 0 1 1 7729.9 14507 1533 13973 33778 39243 39243 1 MKGDYFR Unmodified 915.42727 0.42727255 1005;2944 Q9CQV8;A2A5N1;F6VW30;P68254;F6YY69 Ywhab;Ywhaq 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta no no 0 0 0 1 9 0 1 45.302 45.302 3 0.05861 10993 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.429 24.981 1322.2 879.82 1546.9 1297 0 1634.2 1245 935 1538 1271 0 1533 1 1 1 1 0 1 81162 14508 2944;1005 13974 33779 39244 39244 1 MKPAMETAAEENTEQSQER Acetyl (Protein N-term) 2220.9627 0.96271116 451 P35803;A2AEG6;H3BIV8 Gpm6b Neuronal membrane glycoprotein M6-b no no 1 0 0 1 3 0 1 53.437 53.437 3 1.4245E-07 18272 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.81 33.159 0 20.216 0 0 28.62 19.437 0 19 0 0 28 19 0 1 0 0 1 1 4737.7 14509 451 13975 33780 39245 39245 1 MKPIVHK Unmodified 851.50513 0.50512894 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 1 11 0 1 40.626 40.626 4 0.010802 7909 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.958 38.932 0 106.39 127.85 144.31 0 178.02 0 102 130 139 0 167 0 1 1 1 0 1 5847.2 14510 2343 13976 33781 39246 39246 1 MKPLMGVIYVPLTDK Unmodified 1703.9354 0.93542118 808 F7D432;E9PWE0;E0CYV0;P23506 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 1 12 0 1 82.045 82.045 3 0.017058 22632 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 44.252 21.114 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 4664.2 14511 808 13977 33782 39247 39247 1 MKPLVVFVLGGPGAGK Unmodified 1568.9113 0.91125534 3130 Q9DBP5 Cmpk1 UMP-CMP kinase yes yes 0 0 0 1 13 0 1 84.35 84.35 3 0.010864 33038 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.807 27.106 0 0 0 80.419 24.593 29.146 0 0 0 74 28 28 0 0 0 1 1 1 2065.9 14512 3130 13978 33783 39248 39248 1 MKPNTLVLGFK Unmodified 1246.7108 0.71076462 961 E9QM38;P55012 Slc12a2 Solute carrier family 12 member 2 yes no 0 0 0 1 12 0 1 66.017 66.017 3 0.017463 16306 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.388 25.421 108.42 59.81 121.99 83.449 0 0 102 65 120 83 0 0 1 1 1 1 0 0 9648.1 14513 961 13979 33784 39249 39249 1 MLAAYLYEVSQLK Unmodified 1527.8007 0.80070184 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 12.5 0.5 1 1 95.223 95.223 3 3.1427E-14 27331 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.56 96.384 80.233 62.894 0 0 115.16 58.081 75 61 0 0 112 56 2 2 0 0 3 2 7956.4 14514 3038 13980 33785;33786 39250;39251;39252 39251 3 MLAAYLYEVSQLKN Unmodified 1641.8436 0.84362928 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 1 9.5 4.92 1 2 1 94.416 94.416 3;4 0.00017643 26786 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.65 91.421 94.575 100.62 95.011 52.472 12.941 55.063 89 98 93 50 13 52 4 4 3 3 2 3 17562 14515 3038 13981 33787;33788;33789;33790 39253;39254;39255;39256;39257 39256 5 MLAEDELR Unmodified 975.46953 0.46953129 1693;1833 P61205;Q8BSL7;A2A6T9;P84078 Arf3;Arf2;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1 no no 0 0 0 0 4 0.816 1 1 1 53.235 53.235 2 0.0038036 18169 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.31 31.763 307.89 355.92 443.75 405.86 376.1 522.87 290 361 448 402 387 497 3 4 4 4 3 3 144770 14516 1693;1833 13982 33791;33792;33793 39258;39259;39260;39261 39258 4 MLAEDELRDAVLLVFANK Unmodified 2046.082 0.081962076 1693;1833 P61205;P84078 Arf3;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 no no 0 0 0 1 10.2 2.11 2 1 1 2 100.09 100.09 3;4 3.9299E-07 40365 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.78 67.835 139.01 78.26 81.401 89.147 198.97 234.06 131 80 78 83 198 224 6 4 4 3 5 6 38153 14517 1693;1833 13983 33794;33795;33796;33797;33798;33799 39262;39263;39264;39265;39266;39267;39268;39269;39270;39271 39270 10 MLAITANTLR Unmodified 1102.6169 0.61686423 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 12 0 1 63.883 63.883 2 0.0065971 15525 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.325 34.165 0 38.413 57.114 26.342 45.596 38.141 0 37 56 28 46 37 0 1 1 1 1 1 9507.1 14518 1653 13984 33800 39272 39272 1 MLAPEGALNIHEK Unmodified 1421.7337 0.7336849 1148 J3QQ30;J3QPW1;P53810;F8WGG5 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 7 0 2 58.12 58.12 3;4 0.020899 18365 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.725 23.699 59.58 34.411 56.173 46.103 43.991 58.441 56 37 56 46 46 56 1 1 1 1 1 1 2554.2 14519 1148 13985 33801;33802 39273;39274 39273 2 MLATLFK Unmodified 822.46735 0.46734645 1270 O88544;F6QTS1;D3Z1R9;D3YV99 Cops4 COP9 signalosome complex subunit 4 yes no 0 0 0 0 1 0 1 77.92 77.92 3 0.019334 27155 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.776 40.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14520 1270 13986 33803 39275 39275 1 MLAVDPEAPTEEEHAQR Unmodified 1921.884 0.88399055 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 3.5 0.5 1 1 51.569 51.569 3 2.8283E-12 17433 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117 107.74 30.044 50.008 0 60.202 53.483 67.764 28 47 0 56 56 65 1 1 0 2 2 2 11548 14521 2629 13987 33804;33805 39276;39277 39276 2 MLCAVLEPALNVK Unmodified 1456.7782 0.77819226 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 9.5 0.5 1 1 82.398 82.398 3 0.00079187 28404 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.727 44.404 0 0 76.229 157.22 0 88.478 0 0 74 148 0 83 0 0 1 2 0 1 9193.4 14522 992 13988 33806;33807 39278;39279 39278 2 MLCEILQVGELPNEGR Unmodified 1856.9125 0.91245391 2406 Q8BHL5 Elmo2 Engulfment and cell motility protein 2 yes yes 0 0 0 0 7 0 1 85.457 85.457 3 0.0024359 31222 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.053 31.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14523 2406 13989 33808 39280 39280 1 MLDAEDIVGTARPDEK Unmodified 1758.8458 0.84581413 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 5 0 1 64.056 64.056 3 0.00011989 22567 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.455 62.82 63.642 53.984 78.312 80.958 38.384 53.271 60 56 79 79 42 51 1 1 1 1 1 1 8967.9 14524 418 13990 33809 39281 39281 1 MLDLYSQISSVPIGYNHPALAK Unmodified 2416.2461 0.24606729 1702 P61922;Q3TUE8 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 81.173 81.173 3;4 3.9743E-15 25092 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.166 69.912 0 0 52.475 55.472 44.727 49.892 0 0 50 56 46 48 0 0 1 2 1 1 33093 14525 1702 13991 33810;33811 39282;39283 39283 2 MLDQTLLDLNEM Unmodified 1434.6735 0.67345241 757 D3Z2H9 Tpm3-rs7 no no 0 0 0 0 5.5 0.5 1 1 98.005 98.005 2 0.00037901 36798 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.143 47.974 12.81 5.7348 6.2003 16.025 0 0 12 6 6 15 0 0 2 1 1 2 0 0 1450.2 14526 757 13992 33812;33813 39284;39285;39286 39286 3 MLEIDPQK Unmodified 972.49502 0.49501776 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 61.118 61.118 2;3 0.0071255 20766 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.198 33.842 118.69 82.335 0 48.058 118.01 184.25 111 83 0 46 120 176 2 1 0 1 1 2 16957 14527 2622 13993 33814;33815 39287;39288 39287 2 MLFLLGADGGCITR Unmodified 1522.7636 0.76360482 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 9 4.64 1 1 2 84.656 84.656 2;3 0.00034876 23500 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.237 31.842 139.97 71.406 39.385 8.6408 9.414 59.696 131 75 38 9 9 56 4 3 2 1 1 2 58833 14528 2736 13994 33816;33817;33818;33819 39289;39290;39291;39292;39293 39291 5 MLGAIQVK Unmodified 858.49971 0.49970921 1945 Q3TYA4;B8JJ84;D6RJ81 Stxbp6 yes no 0 0 0 0 11 0 1 62.833 62.833 2 0.0079885 16876 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.699 35.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14529 1945 13995 33820 39294 39294 1 MLGAPEEADANEEGVR Unmodified 1686.7519 0.75191374 1430 P21460;A2APX3 Cst3 Cystatin-C yes no 0 0 0 0 3 0 1 52.944 52.944 3 2.4463E-05 17948 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.163 85.309 29.747 0 49.911 17.792 0 39.442 28 0 47 19 0 37 1 0 1 1 0 1 7359.9 14530 1430 13996 33821 39295 39295 1 MLGGDEEKDPDAAK Unmodified 1474.661 0.66097347 1767 P63040;D3YZ72 Cplx1 Complexin-1 yes no 0 0 0 1 7.25 3.34 2 1 1 49.594 49.594 3;4 0.00019245 15177 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.102 47.133 403.31 248.12 533.44 324.18 425.03 469.7 380 260 522 333 436 452 4 3 4 4 4 4 36401 14531 1767 13997 33822;33823;33824;33825 39296;39297;39298;39299 39298 4 MLGGEEEKDPDAQK Unmodified 1545.6981 0.69808726 1835 P84086 Cplx2 Complexin-2 yes yes 0 0 0 1 7.33 4.03 1 1 1 48.557 48.557 3;4 0.00014617 15452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.208 45.084 217.84 0 368.87 244.49 288.75 96.188 204 0 352 241 287 93 2 0 4 3 3 1 22074 14532 1835 13998 33826;33827;33828 39300;39301;39302;39303 39301 4 MLIDAQAEAAEQLGK Unmodified 1586.7974 0.79740737 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912 Rap1gds1 no no 0 0 0 0 5 0 1 74.431 74.431 3 0.0011396 27449 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.887 31.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14533 919;937 13999 33829 39304 39304 1 MLINQHTLLFGGDTNPAHPK Unmodified 2203.1208 0.1208072 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 10 0 1 62.789 62.789 4 0.0042441 17249 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.186 24.765 0 48.944 0 40.441 0 49.036 0 46 0 37 0 46 0 1 0 1 0 1 4490.6 14534 2806 14000 33830 39305 39305 1 MLIPYIEHWPR Unmodified 1453.754 0.75402642 993 F6SFF5;Q8K1Z0 Coq9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 0 10.5 0.5 1 1 74.731 74.731 3 0.00033971 22035 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.658 63.881 0 0 30.296 60.38 44.031 87.222 0 0 28 56 46 83 0 0 1 1 1 2 14110 14535 993 14001 33831;33832 39306;39307 39307 2 MLISSEDVLHSWAVPSLGLK Unmodified 2181.1504 0.15037599 1294 P00405 Mtco2 Cytochrome c oxidase subunit 2 yes yes 0 0 0 0 10 0.816 1 1 1 89.284 89.284 3;4 2.2189E-13 28904 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.92 86.871 108.22 84.078 135.02 118.98 45.546 46.904 102 88 134 117 46 44 2 2 2 3 1 2 30655 14536 1294 14002 33833;33834;33835 39308;39309;39310 39309 3 MLIYSSK Unmodified 840.44153 0.44152563 519 A2ATI9;Q99JX3;A2ATI8;A2ATI6 Gorasp2 Golgi reassembly-stacking protein 2 yes no 0 0 0 0 11.5 0.5 1 1 58.404 58.404 2 0.026973 14863 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.55 28.762 75.491 50.066 73.905 166.57 149.51 83.772 71 53 74 159 153 80 1 1 1 2 2 1 19631 14537 519 14003 33836;33837 39311;39312 39311 2 MLLAEEDK Unmodified 947.46338 0.46338328 3445 yes yes 0 0 0 0 11 0 1 69.883 69.883 2 0.028796 19995 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.039 2.01 0 0 693.56 0 648.52 0 0 0 641 0 620 0 0 0 1 0 1 0 158640 + 14538 3445 14004 33838 39313 39313 1 MLLCEAVAAVMAK Unmodified 1405.7131 0.71314916 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 12 0 1 95.2 95.2 3 2.769E-05 27330 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.55 61.129 20.387 0 0 24.787 18.735 0 19 0 0 23 19 0 1 0 0 1 1 0 2045.1 14539 3025 14005 33839 39314 39314 1 MLLDIFDENLHPLSK Unmodified 1783.9179 0.91785686 2388 Q8BGU5 Ccny Cyclin-Y yes yes 0 0 0 0 8 0 1 90.098 90.098 3 0.00097882 32655 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.173 34.792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14540 2388 14006 33840 39315 39315 1 MLLEDELQDAVLLLFANK Unmodified 2074.102 0.10202882 1700 P61750;E9Q798;F6UFB9 Arf4 ADP-ribosylation factor 4 yes no 0 0 0 0 13 0 1 120.78 120.78 3 0.00022744 45393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.851 38.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14541 1700 14007 33841 39316 39316 1 MLLEFTDTSYEEK Unmodified 1604.728 0.7279904 1584 P48774;E9PVM7;E9Q024;E9Q5L9 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 11 2.83 1 2 78.768 78.768 2;3 2.1517E-07 30160 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.16 80.202 187.81 118.17 74.107 30.604 29.288 137.51 176 121 74 28 28 129 3 2 1 1 1 2 17630 14542 1584 14008 33842;33843;33844 39317;39318;39319 39318 3 MLLEFTDTSYEEKR Unmodified 1760.8291 0.82910143 1584 P48774;E9PVM7;E9Q024;E9Q5L9 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 1 6 0 1 69.647 69.647 3 5.4385E-07 24596 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.44 96.279 68.794 92.959 81.008 64.518 90.339 115.75 65 93 83 65 93 111 1 1 1 1 1 1 5465.4 14543 1584 14009 33845 39320 39320 1 MLLEYTDSSYDEK Unmodified 1592.6916 0.6916049 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 8.4 3.77 2 1 2 70.268 70.268 2;3 6.0544E-15 26021 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.99 93.243 324.57 352.5 364.08 154.43 440.41 492.72 305 354 359 148 444 474 2 3 3 2 4 4 67355 14544 1347 14010 33846;33847;33848;33849;33850 39321;39322;39323;39324;39325 39325 5 MLLEYTDSSYDEK Oxidation (M) 1608.6865 0.68651952 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 1 0 5 0 1 63.498 63.498 3 0.03081 22390 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.136 31.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14545 1347 14010 33851 39326 39326 76 1 MLLEYTDSSYDEKR Unmodified 1748.7927 0.79271593 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 1 8.67 3.09 1 1 1 61.622 61.622 3 0.00020748 20944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.88 52.23 196.88 162.14 306.74 222.37 266.02 367.64 185 167 297 213 271 352 2 2 2 2 2 3 42989 14546 1347 14011 33852;33853;33854 39327;39328;39329 39327 3 MLLFTEVTR Unmodified 1108.5951 0.59506616 2132 Q61598 Gdi2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 0 11 1.41 1 1 1 1 1 74.743 74.743 2 2.6848E-08 22068 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 166.3 102.64 166.66 487.02 172.87 423.44 582.82 494.54 157 471 176 402 585 475 2 5 2 5 4 4 132820 14547 2132 14012 33855;33856;33857;33858;33859 39330;39331;39332;39333;39334;39335 39333 6 MLLLADMDVVNQLVAGGQFR Unmodified 2189.1337 0.13368007 2149 Q62277 Syp Synaptophysin yes yes 0 0 0 0 11 0.816 1 1 1 106.45 106.45 3 2.0975E-22 29397 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.291 69.795 7 5 0 0 0 0 7 5 0 0 0 0 1 1 0 0 0 0 8633 14548 2149 14013 33860;33861;33862 39336;39337;39338;39339;39340 39340 5 MLLNLHK Unmodified 867.50004 0.50004356 1199 O35593 Psmd14 26S proteasome non-ATPase regulatory subunit 14 yes yes 0 0 0 0 1 0 1 57.956 57.956 3 0.013884 18544 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.029 28.002 48.682 55.185 66.774 0 47.137 28.503 46 56 65 0 46 28 1 1 1 0 1 1 3893 14549 1199 14014 33863 39341 39341 1 MLLSPDQK Unmodified 930.48445 0.48445308 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 0 8.5 0.5 1 1 57.789 57.789 2;3 0.026477 16840 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.878 6.7429 108.89 65.854 37.592 87.441 55.136 47.463 102 65 37 83 56 46 2 1 1 2 1 1 5803.8 14550 2167 14015 33864;33865 39342;39343 39343 2 MLLYTEVTR Unmodified 1124.59 0.58998078 1595 P50396;D6RI86 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 64.961 64.961 2 0.00021589 21112 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 115.7 52.026 767.44 887.42 657.35 880.77 846.51 756.15 721 893 654 854 847 727 5 7 3 5 4 4 202280 14551 1595 14016 33866;33867;33868;33869;33870 39344;39345;39346;39347;39348;39349;39350;39351 39344 8 MLMSSIK Unmodified 808.41868 0.4186817 2819 Q924B0;O55023;Q80ZJ2;A0A0A6YW07;D3Z703 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 11 0 1 60.508 60.508 2 0.006129 15861 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.29 45.419 0 0 0 172.69 0 168.43 0 0 0 158 0 158 0 0 0 1 0 1 14992 14552 2819 14017 33871 39352 39352 1 MLNVTAPTPQQLQAFK Unmodified 1785.9447 0.94474031 997 F6SZ47;P28028 Braf Serine/threonine-protein kinase B-raf yes no 0 0 0 0 10 0 1 77.298 77.298 3 0.026682 23680 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.909 17.69 49.026 65.854 0 59.473 92.257 66.657 46 65 0 56 93 65 1 1 0 1 1 1 4418.4 14553 997 14018 33872 39353 39353 1 MLPDKDCR Unmodified 1033.4685 0.46848544 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 7 0 1 42.536 42.536 3 0.026249 11020 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.692 26.69 535.58 292.8 628.06 456.71 633.55 586.34 504 319 618 463 645 567 1 1 1 1 1 1 38768 14554 1410 14019 33873 39354 39354 1 MLPELFQDDEK Unmodified 1363.633 0.63296781 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 9 4 1 1 77.416 77.416 3 0.005898 29469 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.693 36.555 48.905 55.515 46.167 57.932 27.906 29.848 46 56 46 56 28 28 1 2 1 2 1 1 5091.8 14555 728 14020 33874;33875 39355;39356 39356 2 MLPQPYLLDPSITLGQYVQPQGVTVVDFVR Unmodified 3372.7792 0.77918512 3008 Q9CZR8 Tsfm Elongation factor Ts, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 103.96 103.96 4 0.0046677 36691 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.675 22.064 0 6.384 9.6175 5.9848 0 3.198 0 6 9 6 0 3 0 1 1 2 0 1 1487.8 14556 3008 14021 33876;33877 39357;39358 39357 2 MLPSYVR Unmodified 864.45276 0.45275902 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9 0 1 53.716 53.716 2 0.0086028 14949 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.16 65.034 221.54 0 275.87 0 209.2 0 208 0 256 0 200 0 1 0 1 0 1 0 63607 14557 1055 14022 33878 39359 39359 1 MLPTFVR Unmodified 862.47349 0.47349446 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 11.3 1.25 1 1 1 63.763 63.763 2 0.0060025 17839 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 144.29 71.677 1303.1 812.54 493.15 417.35 422.41 299.71 1221 854 491 416 432 287 3 3 2 2 2 1 251840 14558 1055 14023 33879;33880;33881 39360;39361;39362 39360 3 MLPTIIADNAGYDSADLVAQLR Unmodified 2346.1889 0.18894634 1823 P80314;A0A1W2P8B6 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 8 0 1 91.629 91.629 3 2.2311E-09 33242 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.963 49.481 0 0 29.937 8.0527 0 0 0 0 28 9 0 0 0 0 1 1 0 0 2245.5 14559 1823 14024 33882 39363 39363 1 MLQEDELR Unmodified 1032.491 0.49099502 1834 P84084 Arf5 ADP-ribosylation factor 5 yes yes 0 0 0 0 4 0.816 1 1 1 43.811 43.811 2;3 0.011446 10306 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.973 9.1185 108.9 56.207 44.08 99.022 0 89.544 102 56 46 93 0 84 3 1 1 3 0 2 18799 14560 1834 14025 33883;33884;33885 39364;39365;39366;39367 39364 4 MLQEDELRDAVLLVFANK Unmodified 2103.1034 0.1034258 1834 P84084 Arf5 ADP-ribosylation factor 5 yes yes 0 0 0 1 8 0 1 96.322 96.322 4 0.00015507 34722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.121 32.08 12.876 0 0 0 0 26.65 12 0 0 0 0 25 1 0 0 0 0 1 890.65 14561 1834 14026 33886 39368 39368 1 MLQFVLPVATQIQQEVIK Unmodified 2084.1704 0.17038315 1178 O35127 Grcc10 Protein C10 yes yes 0 0 0 0 11 0.816 1 1 1 100.44 100.44 3 4.3357E-08 33118 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.97 69.335 0 6.1775 21.537 30.283 5.7036 6.396 0 6 21 30 6 6 0 1 2 3 1 1 11127 14562 1178 14027 33887;33888;33889 39369;39370;39371;39372 39370 4 MLQLILGCAVNCEQK Unmodified 1775.8732 0.87323163 2461 Q8BUK6 Hook3 Protein Hook homolog 3 yes yes 0 0 0 0 11 0 1 87.407 87.407 3 0.03843 27815 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.193 16.615 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14563 2461 14028 33890 39373 39373 1 MLQLVEESK Unmodified 1075.5583 0.5583463 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 69.213 69.213 2;3 9.5894E-06 22951 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 152.28 70.729 215.39 219.45 239.29 254.36 350.27 181.57 204 222 242 250 352 176 3 3 3 3 4 3 79099 14564 1681 14029 33891;33892;33893;33894 39374;39375;39376;39377;39378 39377 5 MLQTSSVLVSGLR Unmodified 1389.765 0.76498503 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 11 1.41 1 1 1 1 1 70.339 70.339 2;3 6.0782E-22 20250 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 161.25 96.098 143.07 166.37 140.14 85.846 112.81 195.06 134 167 139 84 111 186 2 4 4 3 1 3 97860 14565 1876 14030 33895;33896;33897;33898;33899 39379;39380;39381;39382;39383 39381 5 MLQVASQASR Unmodified 1089.5601 0.56007764 1856 P97765 Wbp2 WW domain-binding protein 2 yes yes 0 0 0 0 9 0 1 47.594 47.594 2 8.5145E-05 11977 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.4 70.102 49.358 0 0 0 77.404 0 46 0 0 0 74 0 1 0 0 0 1 0 6997.3 14566 1856 14031 33900 39384 39384 1 MLSAGVTETVLK Unmodified 1247.6795 0.67952407 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 7.5 0.5 1 1 69.029 69.029 3 2.3446E-06 22810 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.21 77.996 89.298 81.097 71.376 75.795 44.3 107.47 84 83 74 74 46 102 2 2 2 2 1 2 8395.3 14567 919;937 14032 33901;33902 39385;39386 39386 2 MLSDYGTTFVAAWK Unmodified 1588.7596 0.7595653 2313 Q80U56 Avl9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 0 10 0 1 85.442 85.442 3 0.032993 27282 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.013 18.678 0 39.368 0 40.441 0 0 0 37 0 37 0 0 0 1 0 1 0 0 2537.6 14568 2313 14033 33903 39387 39387 1 MLSNENFEEYLR Unmodified 1543.6977 0.69769333 1872 Q00915 Rbp1 Retinol-binding protein 1 yes yes 0 0 0 0 6 0 1 73 73 2 0.041377 26217 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.948 22.35 19.969 38.456 37.626 0 37.714 28.772 19 38 37 0 37 28 1 1 1 0 1 1 1593.4 14569 1872 14034 33904 39388 39388 1 MLSSCCK Unmodified 884.35543 0.35542951 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 0 10 1.87 1 1 1 1 43.811 43.811 2 0.012395 11022 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.93 85.999 652.28 342.28 629.73 533.8 356.91 660.33 613 359 626 526 363 629 4 3 4 3 3 4 60807 14570 1160 14035 33905;33906;33907;33908 39389;39390;39391;39392 39389 4 MLSSILGK Unmodified 847.48372 0.48372479 2026 Q3ZAX3;Q61120 Shc3 SHC-transforming protein 3 yes no 0 0 0 0 12 0 1 73.205 73.205 2 0.0081493 18960 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.568 27.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14571 2026 14036 33909 39393 39393 1 MLTAQDMSYDEAR Unmodified 1529.649 0.64902858 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.5 0.5 1 1 57.574 57.574 2 4.2305E-19 19626 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.55 130.08 35.409 0 0 9.837 19.874 0 33 0 0 9 19 0 2 0 0 1 1 0 4394.8 14572 2148 14037 33910;33911 39394;39395 39394 2 MLTAQDVSYDEAR Unmodified 1497.677 0.67695789 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 3.56 1 1 1 56.002 56.002 2 2.4123E-22 18951 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.26 108.15 30.044 0 0 0 19.874 19 28 0 0 0 19 19 1 0 0 0 1 1 4989.1 14573 2186 14038 33912;33913;33914 39396;39397;39398 39398 3 MLTFNPHK Unmodified 986.50077 0.50077184 1769 P63085;A0A338P736;A0A338P781 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 10 0 1 52.898 52.898 3 0.042677 12817 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.489 26.246 316.91 0 297.11 313.94 265.59 344.2 297 0 289 308 279 330 1 0 1 1 1 1 139550 14574 1769 14039 33915 39399 39399 1 MLTFNPHKR Unmodified 1142.6019 0.60188287 1769 P63085;A0A338P736;A0A338P781 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 1 6.5 5.5 1 1 44.405 44.405 4 4.034E-06 8129 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 146.81 112.28 374.51 406.01 552.06 474.14 354.32 439.74 354 414 554 470 374 422 2 2 2 2 2 2 41536 14575 1769 14040 33916;33917 39400;39401 39401 2 MLTFNPHKR Oxidation (M) 1158.5968 0.59679749 1769 P63085;A0A338P736;A0A338P781 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 1 1 12 0 1 41.621 41.621 4 0.004531 7140 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.019 35.676 69.125 48.55 63 91.328 58.565 0 65 51 65 88 60 0 1 1 1 1 1 0 2348.4 14576 1769 14040 33918 39402 39402 140 1 MLTFNPNKR Unmodified 1119.5859 0.58589846 769 D3Z3G6;Q63844;A0A0U1RPX4;D3Z6D8 Mapk3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 1 12 0 1 51.433 51.433 3 0.007532 10789 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.716 49.412 196.72 0 300.68 174.71 160.6 237.4 185 0 286 179 169 227 1 0 1 1 1 1 25650 14577 769 14041 33919 39403 39403 1 MLTGPVYSQSTALTHK Unmodified 1732.8818 0.8818057 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9 0 1 58.572 58.572 3 2.8247E-05 17191 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.073 74.692 0 118.1 0 111.49 0 0 0 111 0 102 0 0 0 2 0 2 0 0 9583 14578 2264 14042 33920 39404;39405 39404 2 MLTINPAK Unmodified 886.49462 0.49462383 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 10.7 0.471 1 2 58.644 58.644 2;3 0.0018351 15036 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.45 72.709 0 106.54 166.67 147.14 388.25 161.32 0 102 166 148 385 158 0 1 2 2 2 2 36238 14579 103 14043 33921;33922;33923 39406;39407;39408 39408 3 MLTINPSK Unmodified 902.48954 0.48953845 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 11 1.41 1 1 1 1 1 57.75 57.75 2;3 3.5975E-16 15036 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 182.73 100.34 2112.6 1215.1 1877.9 956.23 1114.1 2180.2 1985 1281 1849 960 1165 2075 7 6 6 3 4 7 345390 14580 1355 14044 33924;33925;33926;33927;33928 39409;39410;39411;39412;39413;39414;39415 39410 7 MLTINPSKR Unmodified 1058.5906 0.59064948 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 1 11 0.707 1 2 1 48.391 48.391 2;3 0.0033218 9686 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.986 45.599 2873.8 1691.4 3519.4 2212.9 1347.6 3319.4 2705 1825 3451 2232 1471 3149 2 2 3 2 2 3 671120 14581 1355 14045 33929;33930;33931;33932 39416;39417;39418;39419 39419 4 MLTINPSKR Oxidation (M) 1074.5856 0.5855641 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 1 1 11.5 0.5 1 1 44.836 44.836 3 0.023956 9177 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.425 48.383 256.7 176.71 168.79 0 120.9 283.3 241 185 162 0 121 269 2 2 1 0 1 2 29724 14582 1355 14045 33933;33934 39420;39421 39420 78 2 MLVDDIGDVTITNDGATILK Unmodified 2103.0769 0.076936277 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 0 0 0 0 5 0 1 87.502 87.502 3 0.039718 33462 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.428 14.305 0 20.216 0 9.4714 19.439 0 0 19 0 9 19 0 0 1 0 1 1 0 1051.2 14583 1356 14046 33935 39422 39422 1 MLVELSK Unmodified 818.45718 0.45717569 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 9 0 1 65.148 65.148 2 0.022688 20404 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.92 10.994 98.854 90.947 80.114 83.888 109.32 85.358 93 93 83 83 111 83 1 1 1 1 1 1 15342 14584 1824 14047 33936 39423 39423 1 MLVSGAGDIK Unmodified 989.52157 0.52156686 1826 P80317;Q61390 Cct6a;Cct6b T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 yes no 0 0 0 0 8 0 2 58.958 58.958 2;3 0.00024337 18101 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.565 46.687 0 106.34 130.69 56.213 66.371 47.142 0 102 129 56 65 46 0 2 2 1 1 1 11168 14585 1826 14048 33937;33938 39424;39425 39424 2 MLVTFDEELRPLPVSVR Unmodified 2000.0765 0.076482767 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 1 8 0 1 78.974 78.974 3 0.0010851 27563 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.026 21.588 0 58.811 46.243 0 35.698 87.459 0 56 46 0 37 83 0 1 1 0 1 1 4223.2 14586 2697 14049 33939 39426 39426 1 MLYAATR Unmodified 824.42146 0.42145889 3361;2776 Q91YR1;D3Z2H0;Q9Z0P5;A0A1L1STC8 Twf1;Twf2 Twinfilin-1;Twinfilin-2 no no 0 0 0 0 9 0 1 46.612 46.612 2 0.034977 11563 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.305 26.848 0 97.042 114.28 0 0 118.33 0 93 111 0 0 111 0 1 1 0 0 1 8880.6 14587 2776;3361 14050 33940 39427 39427 1 MLYPGSVYLLQK Unmodified 1410.7581 0.75810874 3381 Q9Z1Q2 Abhd16a Abhydrolase domain-containing protein 16A yes yes 0 0 0 0 12 0 1 79.886 79.886 3 0.00017581 21630 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.693 54.034 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 2819.1 14588 3381 14051 33941 39428 39428 1 MLYSSCK Unmodified 887.38811 0.38810985 3361;2776 Q91YR1;Q9Z0P5;A0A1L1STC8 Twf1;Twf2 Twinfilin-1;Twinfilin-2 no no 0 0 0 0 9.5 0.5 1 1 49.061 49.061 2 0.027111 12661 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.041 52.803 88.652 0 68.333 34.803 83.251 168.32 83 0 65 37 83 167 1 0 1 1 1 2 8457.4 14589 2776;3361 14052 33942;33943 39429;39430 39429 2 MMEGLDDGPDFLSEEDR Acetyl (Protein N-term) 1996.803 0.80302262 2225 Q6P8X1;A0A1W2P6Y0 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 1 0 0 0 1 0 1 90.727 90.727 2 1.6033E-05 32288 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.306 57.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14590 2225 14053 33944 39431 39431 1 MMGVPLQCSALLVR Unmodified 1573.8143 0.81426019 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 10.3 0.471 2 1 76.278 76.278 2;3 0.00036324 23285 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.9 45.888 29.904 86.912 26.748 0 0 19 28 84 28 0 0 19 1 2 1 0 0 1 12995 14591 1579 14054 33945;33946;33947 39432;39433;39434 39433 3 MMPTPVILLK Acetyl (Protein N-term) 1183.6709 0.67087364 1822 P80313;A0A0N4SV00;A0A0N4SV22 Cct7 T-complex protein 1 subunit eta yes no 1 0 0 0 13 0 1 98.941 98.941 2 0.0065702 39896 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.547 43.171 0 29.017 46.368 37.336 54.187 77.856 0 28 46 37 56 74 0 1 1 1 2 1 3091.7 14592 1822 14055 33948 39435;39436 39436 2 MMTGGFFHK Unmodified 1054.4728 0.47284253 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 11.5 1.12 1 1 1 1 58.959 58.959 3 0.0017209 15093 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.943 47.392 119.36 291.43 352.1 202.49 98.777 234.9 112 287 343 195 102 223 2 4 3 3 1 3 49177 14593 1702 14056 33949;33950;33951;33952 39437;39438;39439;39440 39438 4 MMVGNNLK Unmodified 905.44629 0.44629343 2164 Q63810;Q63811 Ppp3r1;Ppp3r2 Calcineurin subunit B type 1;Calcineurin subunit B type 2 yes no 0 0 0 0 9.5 0.5 1 1 53.644 53.644 2 0.00055578 13134 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 151.51 101.47 193.66 110.37 146.86 208.64 238.3 274.62 181 116 139 203 246 264 1 1 1 2 2 2 33624 14594 2164 14057 33953;33954 39441;39442 39442 2 MNAGSDPVVIVSAAR Acetyl (Protein N-term) 1527.7715 0.77152697 2518 Q8CAY6 Acat2 Acetyl-CoA acetyltransferase, cytosolic yes yes 1 0 0 0 4 0 1 71.495 71.495 2 0.027016 25975 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.475 20.312 0 20.216 0 0 19.234 18.639 0 19 0 0 19 18 0 1 0 0 1 1 1953.8 14595 2518 14058 33955 39443 39443 1 MNEDGLTPEQR Oxidation (M) 1304.5667 0.56667916 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 1 0 1 0 1 35.715 35.715 3 0.026593 9326 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.732 34.953 20.387 0 0 29.552 55.919 37.846 19 0 0 28 56 37 1 0 0 1 1 1 7285.4 14596 1737 14059 33956 39444 39444 130 1 MNEDGLTPEQR Unmodified 1288.5718 0.57176453 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 43.88 43.88 2 8.0533E-09 13579 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 132.85 86.691 265.98 187.73 385.66 119.48 424.49 180.76 250 195 373 120 417 176 3 3 4 1 4 2 79436 14597 1737 14059 33957;33958;33959;33960 39445;39446;39447;39448 39445 4 MNEVISLWK Unmodified 1118.5794 0.57941609 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10.8 1.48 1 1 1 1 79.577 79.577 2;3 0.00073444 24983 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.7 71.272 347.17 238.84 224.09 283.93 301.54 408.47 325 250 221 268 305 390 3 5 4 4 4 5 109570 14598 551 14060 33961;33962;33963;33964 39449;39450;39451;39452;39453;39454 39451 6 MNFSDFLTVMTQK Unmodified 1560.7316 0.73163599 591 B1AUQ7;Z4YJH1;Q9R1K9 Cetn2 Centrin-2 yes no 0 0 0 0 11.5 0.5 1 1 94.744 94.744 3 0.0001107 30713 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.911 45.473 0 0 14.773 8.4129 28.902 37 0 0 14 9 28 37 0 0 1 1 1 1 9315.6 14599 591 14061 33965;33966 39455;39456 39455 2 MNLAIALTAAR Unmodified 1143.6434 0.64341333 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 6.25 5.26 2 1 1 71.9 71.9 2;3 0.0031792 20785 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.327 13.686 207.97 48.515 238.23 101.18 41.993 247.75 195 46 228 97 47 237 2 1 3 2 2 4 113370 14600 2179 14063 33967;33968;33969;33970 39457;39458;39459;39460 39459 4 MNLASSFVNGFVNAAFGQDK Deamidation (N) 2116.9888 0.98878997 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 1 0 0 8 0 1 89.299 89.299 3 1.9684E-06 32315 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.963 45.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14601 2697 14064 33971 39461 39461 968 1 MNLASSFVNGFVNAAFGQDK Unmodified 2116.0048 0.004774387 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 12 0 1 100.19 100.19 3 1.5077E-05 28483 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.208 38.902 6.408 5.9519 0 3.279 0 0 6 6 0 3 0 0 1 1 0 1 0 0 687.53 14602 2697 14064 33972 39462 39462 1 MNLFQSITSALDNSLAK Unmodified 1851.94 0.94004887 2215 Q6P3A8 Bckdhb 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 101.82 101.82 3 1.1492E-26 28790 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.36 81.857 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 3276.4 14603 2215 14065 33973;33974 39463;39464 39464 2 MNLGVGAYR Unmodified 979.49094 0.49093544 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 53.463 53.463 2 1.0366E-11 14678 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 133.9 90.901 118.64 90.952 0 0 119.85 165.01 111 93 0 0 120 158 1 1 0 0 1 1 16992 14604 1312 14066 33975;33976 39465;39466 39466 2 MNNAGLNSEK Acetyl (Protein N-term);Deamidation (N) 1119.4866 0.48663792 2626 Q8R016;E9Q6V3 Blmh Bleomycin hydrolase yes no 1 1 0 0 3 0 1 52.534 52.534 2 0.0089636 17825 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.608 32.46 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14605 2626 14067 33977 39467 39467 955;956 1 MNNAGLNSEK Acetyl (Protein N-term) 1118.5026 0.50262234 2626 Q8R016;E9Q6V3 Blmh Bleomycin hydrolase yes no 1 0 0 0 4 0 1 49.936 49.936 2 3.6895E-05 16257 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.507 48.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14606 2626 14067 33978 39468 39468 1 MNNGDVDLTNDR Oxidation (M);Deamidation (N) 1379.5623 0.56232206 1362 P12960 Cntn1 Contactin-1 yes yes 0 1 1 0 1 0 1 40.731 40.731 2 0.053481 11431 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.003 38.691 0 0 19.717 18.88 37.835 0 0 0 19 19 37 0 0 0 1 1 1 0 4015.5 14607 1362 14068 33979 39469 39469 434;435;436 82 1 MNNGDVDLTNDR 2 Deamidation (N) 1364.5514 0.55142302 1362 P12960 Cntn1 Contactin-1 yes yes 0 2 0 0 1.5 0.5 1 1 50.999 50.999 2 0.0035356 15334 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.187 45.792 9.535 9.4227 48.683 0 28.281 29.31 9 9 47 0 28 28 1 1 3 0 2 1 4609.4 14608 1362 14068 33980;33981 39470;39471;39472 39470 434;435;436 3 MNNGDVDLTNDR Deamidation (N) 1363.5674 0.56740744 1362 P12960 Cntn1 Contactin-1 yes yes 0 1 0 0 2.5 0.5 1 1 48.559 48.559 2 3.3794E-21 16161 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 162.23 102.58 20.387 29.792 0 90.719 0 0 19 28 0 83 0 0 1 1 0 2 0 0 12288 14609 1362 14068 33982;33983 39473;39474 39474 434;435;436 2 MNNGINR 3 Deamidation (N) 820.33852 0.33851712 264 A0A1B0GSS2 yes yes 0 3 0 0 2 0 1 37.291 37.291 2 0.039068 10588 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.592 12.044 358.54 192.32 351.94 301.08 368.85 370.04 337 209 350 301 378 357 1 1 1 1 1 1 48616 14610 264 14069 33984 39475 39475 82;83;84 1 MNPEYDYLFK Acetyl (Protein N-term);Oxidation (M) 1376.5959 0.59585402 2065;3040 Q5SW88;Q5SW87;Q5SW86;Q9D1G1 Rab1;Rab1b Ras-related protein Rab-1B no no 1 0 1 0 4.5 0.5 1 1 87.632 87.632 2 0.0093693 33512 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.06 47.329 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 643.74 14611 2065;3040 14070 33985;33986 39476;39477 39477 162 2 MNPEYDYLFK Acetyl (Protein N-term) 1360.6009 0.6009394 2065;3040 Q5SW88;Q5SW87;Q5SW86;Q9D1G1 Rab1;Rab1b Ras-related protein Rab-1B no no 1 0 0 0 8 3.56 1 1 1 87.596 87.596 2 0.0013325 34466 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.239 73.35 75.835 18.848 19.198 29.46 18.867 49.564 74 19 19 28 19 47 3 1 1 1 1 2 24581 14612 2065;3040 14070 33987;33988;33989 39478;39479;39480 39480 3 MNQDGLTPQQR Unmodified 1286.6037 0.60373336 2392 Q8BGZ1;F2Z3Z1 Hpcal4 Hippocalcin-like protein 4 yes no 0 0 0 0 9 4 1 1 40.568 40.568 2 5.2062E-05 11389 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.174 63.23 0 29.329 27.707 18.606 27.105 38.669 0 28 28 19 28 37 0 1 1 1 1 1 3551.2 14613 2392 14071 33990;33991 39481;39482 39481 2 MNQLLSR Unmodified 860.45382 0.45382165 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 9 0.816 1 1 1 50.776 50.776 2 0.0072313 13495 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 129.55 42.271 1179.2 1329.8 2176.2 1955.2 319.23 948.16 1111 1339 2171 1913 332 898 2 2 3 3 1 2 233410 14614 2173 14072 33992;33993;33994 39483;39484;39485 39484 3 MNSAGADEIGK Acetyl (Protein N-term);Deamidation (N) 1134.4863 0.48630357 1971 Q9JII5;Q3UGB5 Dazap1 DAZ-associated protein 1 yes no 1 1 0 0 2 0 1 57.921 57.921 2 0.02721 19772 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.608 34.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14615 1971 14073 33995 39486 39486 789 1 MNSAGADEIGK Acetyl (Protein N-term) 1133.5023 0.50228799 1971 Q9JII5;Q3UGB5 Dazap1 DAZ-associated protein 1 yes no 1 0 0 0 3 0 1 55.371 55.371 2 5.6438E-08 19149 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.461 50.496 78.83 82.559 26.189 38.88 48.116 59.696 74 83 28 37 46 56 2 2 1 1 1 1 3962.5 14616 1971 14073 33996 39487;39488 39488 2 MNTCMPNPR Oxidation (M);2 Deamidation (N) 1137.4253 0.42529999 850 E9PY48;Q8BSP2 Ncaph2 Condensin-2 complex subunit H2 yes no 0 2 1 0 4 0 1 18.086 18.086 3 0.058686 2528 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.607 16.74 29.974 13.939 0 0 25.369 22.728 28 15 0 0 25 22 1 1 0 0 1 1 5220.1 14617 850 14074 33997 39489 39489 222;223 1 MNTSFTR Acetyl (Protein N-term);Oxidation (M) 913.39637 0.39636635 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 1 0 1 0 1 0 1 34.708 34.708 2 0.056694 8857 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.138 68.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2989.3 14618 1390 14075 33998 39490 39490 1 MNTSFTR Acetyl (Protein N-term) 897.40145 0.40145173 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 1 0 0 0 3 0 1 49.514 49.514 2 0.057238 16435 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.035 56.188 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1771.2 14619 1390 14075 33999 39491 39491 1 MNVEHEVNLLVEEIHR Acetyl (Protein N-term) 2001.9942 0.9942097 330 A0A1W2P7X0;E9QMV2;Q4KML4 Abracl Costars family protein ABRACL yes no 1 0 0 0 4 0 1 83.032 83.032 3 3.5918E-05 31471 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.319 26.212 20.265 0 20.456 0 0 20.254 19 0 19 0 0 19 1 0 1 0 0 1 3541 14620 330 14076 34000 39492 39492 1 MNVFDTELK Unmodified 1095.527 0.52704617 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 13 0 1 69.061 69.061 3 0.031835 25559 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.785 18.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14621 1242 14077 34001 39493 39493 1 MNVLADALK Unmodified 973.52665 0.52665224 1052 F8WJ41;P62245;D3YVB4;D3Z712 Rps15a 40S ribosomal protein S15a yes no 0 0 0 0 10 0 1 71.908 71.908 2 0.028805 21403 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.434 0.63393 69.193 43.341 56.044 35.897 64.024 67.463 65 46 56 37 65 65 1 1 1 1 1 1 3374.1 14622 1052 14078 34002 39494 39494 1 MNYSDAIEWLK Unmodified 1368.6384 0.63838754 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7 0 1 81.684 81.684 3 0.0012194 29513 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.199 42.001 0 48.671 16.349 28.927 37.373 0 0 46 19 28 37 0 0 1 1 1 1 0 2477.8 14623 2441 14079 34003 39495 39495 1 MPCFPIESK Unmodified 1107.5093 0.50928762 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 8 0 1 67.437 67.437 3 0.022405 22123 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.423 24.573 0 0 58.555 45.726 56.476 0 0 0 56 46 56 0 0 0 1 1 1 0 3006.3 14624 1424 14080 34004 39496 39496 1 MPCTEDYLSLILNR Oxidation (M) 1739.8222 0.82224192 656 CON__P02769 yes yes 0 0 1 0 7.5 0.5 1 1 82.639 82.639 3 0.0034026 29889 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.267 45.291 59.368 26.161 98.909 39.76 36.215 19.221 56 28 93 37 37 19 2 1 1 1 1 1 9613.2 + 14625 656 14081 34005;34006 39497;39498 39497 34 2 MPDESFR Unmodified 880.3749 0.37490263 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 4 0 1 47.466 47.466 2 0.027668 15013 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.068 48.894 0 0 0 60.532 35.921 0 0 0 0 56 37 0 0 0 0 1 1 0 5747.5 14626 1042 14082 34007 39499 39499 1 MPEDESTPEK Unmodified 1161.486 0.48596922 1832;1734;2763 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5;Q91X97;D3YVA2;D3Z2Z8 Hpcal1;Hpca;Ncald Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 0 3 0 1 44.785 44.785 2 4.6052E-07 14208 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.63 103.23 69.032 42.892 83.555 74.738 61.908 77.117 65 46 83 74 65 74 1 1 1 1 1 1 8136.5 14627 1734;1832;2763 14083 34008 39500 39500 1 MPEDESTPEKR Unmodified 1317.5871 0.58708025 1832;1734;2763 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5;Q91X97;D3YVA2;D3Z2Z8 Hpcal1;Hpca;Ncald Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 1 5.6 3.77 2 1 1 1 37.875 37.875 3;4 3.365E-08 11110 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.74 93.364 354.87 516.44 356.73 179.91 285.96 695.96 334 509 349 185 287 658 4 4 3 3 3 3 129080 14628 1734;1832;2763 14084 34009;34010;34011;34012;34013 39501;39502;39503;39504;39505 39501 5 MPEDQVAK Unmodified 916.43242 0.43241751 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 2 45.788 45.788 2;3 0.054821 13888 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.679 26.323 98.069 72.395 47.409 0 27.631 97.284 92 75 46 0 28 92 2 2 1 0 1 2 10943 14629 20;2354 14085 34014;34015 39506;39507 39507 2 MPFPVNHGASSEDSLLQDAAK Oxidation (M) 2229.0372 0.037196727 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 1 0 5 0 1 60.357 60.357 3 0.00088517 20959 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.32 34.471 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 2301.8 14630 3302 14086 34016 39508 39508 201 1 MPFPVNHGASSEDSLLQDAAK Unmodified 2213.0423 0.042282105 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 7.71 2.37 1 1 2 2 1 67.121 67.121 3;4 7.3553E-23 23365 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.74 104.46 226.83 184.87 408.3 251.73 262.86 372.39 213 185 389 241 260 353 3 4 4 4 4 4 85250 14631 3302 14086 34017;34018;34019;34020;34021;34022;34023 39509;39510;39511;39512;39513;39514;39515 39510 7 MPGIGWLK Unmodified 900.48914 0.48914452 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 0 12 0 1 75.758 75.758 2 0.036582 20017 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.093 38.357 59.38 43.567 82.144 106.59 0 69.29 56 46 83 102 0 65 1 1 1 1 0 1 8874.5 14632 2403 14087 34024 39516 39516 1 MPHLFTK Unmodified 872.45784 0.4578444 492 A2ALV7;Q6PDI5;A2ALV8;A2ALV6 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 11 0 1 55.54 55.54 3 0.038156 13762 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.554 22.265 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 3051.8 14633 492 14089 34025 39517 39517 1 MPIIPFLL Unmodified 942.56125 0.56124683 1057 G3UWE1;Q52L67;Q9CY27;Q3TAN8 Tecr Very-long-chain enoyl-CoA reductase yes no 0 0 0 0 7.6 5.43 2 1 1 1 116.08 116.08 2 0.014627 30967 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.077 65.6 10.721 7.1283 1.8467 0 9.2359 34.846 10 7 2 0 9 34 3 2 1 0 2 4 21964 14634 1057 14090 34026;34027;34028;34029;34030 39518;39519;39520;39521;39522 39521 5 MPILISK Unmodified 800.483 0.48299651 481 A2AKD7;Q61234 Snta1 Alpha-1-syntrophin no no 0 0 0 0 11 0 1 67.933 67.933 2 0.040319 19099 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.116 39.013 0 211.74 0 204.39 0 0 0 199 0 187 0 0 0 1 0 1 0 0 22863 14635 481 14091 34031 39523 39523 1 MPIPVIQAFGILK Unmodified 1425.8418 0.84177879 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 6.83 5.84 3 1 2 97.608 97.608 2;3 1.0794E-21 33583 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 158.05 124.09 286.3 238.73 281.24 255.28 217.01 380.97 269 244 280 251 220 363 8 8 7 8 5 8 60943 14636 1857 14092 34032;34033;34034;34035;34036;34037 39524;39525;39526;39527;39528;39529;39530;39531;39532;39533;39534;39535;39536 39525 13 MPIPVIQAFGILK Oxidation (M) 1441.8367 0.83669341 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 1 0 1 0 4 97.932 97.932 3 0.011723 33558 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.354 18.291 20.291 9.1324 21.32 5.3319 7.0771 6.396 19 10 20 5 7 6 2 2 2 1 1 1 1584.7 14637 1857 14092 34038;34039;34040;34041 39537;39538;39539;39540;39541 39537 153 5 MPLATSTDHGHNLQTVQLLIK Unmodified 2316.226 0.22600055 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 0 1 66.639 66.639 4 7.7389E-06 21041 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.206 33.403 0 0 107.48 64.639 0 0 0 0 102 65 0 0 0 0 1 1 0 0 13201 14638 2148 14093 34042 39542 39542 1 MPLGFTFSFPCK Unmodified 1430.6727 0.67266455 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 6.62 5.63 4 3 1 88.438 88.438 2;3;4 8.0886E-15 31424 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 140.45 106.19 732.66 224.3 359.95 605.12 653.26 651.66 685 227 351 584 664 626 9 8 7 10 8 9 226480 14639 1055 14094 34043;34044;34045;34046;34047;34048;34049;34050 39543;39544;39545;39546;39547;39548;39549;39550;39551;39552;39553;39554;39555;39556 39543 14 MPLIGLGTWK Unmodified 1114.6209 0.62088698 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 3.75 4.76 3 1 84.971 84.971 2;3 5.1221E-05 29545 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 113.18 70.84 291.27 220.69 274.89 273.77 136.63 315.92 273 223 265 259 138 299 5 6 8 6 5 7 53749 14640 3214 14095 34051;34052;34053;34054 39557;39558;39559;39560;39561;39562;39563;39564;39565;39566 39558 10 MPLVGLGTWK Unmodified 1100.6052 0.60523691 1429 P21300 Akr1b7 Aldose reductase-related protein 1 yes yes 0 0 0 0 9.25 4.82 1 1 1 1 78.731 78.731 2 8.3405E-05 27504 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.52 0 0 77.818 117.47 95.992 64.192 67.458 0 75 116 92 65 65 0 2 3 2 1 2 25964 14641 1429 14096 34055;34056;34057;34058 39567;39568;39569;39570 39567 4 MPPDPYLQETR Unmodified 1345.6336 0.63363651 1195 O35449 Prrt1 Proline-rich transmembrane protein 1 yes yes 0 0 0 0 5 0 1 56.986 56.986 3 0.052578 19301 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.426 20.1 29.846 17.902 18.033 29.2 17.525 29.348 28 19 19 28 19 28 1 1 1 1 1 1 1577.9 14642 1195 14097 34059 39571 39571 1 MPQLLAYYYK Unmodified 1288.6526 0.65258104 183 Q3UM29;A0A0R4J0Q9;Q3TR20 Cog7 Conserved oligomeric Golgi complex subunit 7 yes no 0 0 0 0 12 0 1 79.787 79.787 3 0.014292 21622 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.268 32.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14643 183 14098 34060 39572 39572 1 MPSKPGEDFEHAALVPDTSK Unmodified 2155.0256 0.025569409 1424 P20357;G3UZK9;G3UZE9;F7ALC8 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 6 0 1 59.771 59.771 4 2.9275E-05 20085 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.553 31.332 231.28 0 263.04 141.31 254.08 331.74 217 0 250 148 260 318 1 0 1 1 1 1 14027 14644 1424 14099 34061 39573 39573 1 MPTLGLGTWK Unmodified 1102.5845 0.58450147 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 11.7 0.471 1 2 76.043 76.043 2;3 0.0032787 20184 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.261 53.534 0 48.944 102 108.51 158.44 124.46 0 46 102 102 158 121 0 1 1 2 1 2 75586 14645 1548 14100 34062;34063;34064 39574;39575;39576 39575 3 MQASIEK Unmodified 805.40039 0.4003891 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 7 0 1 46.049 46.049 2 0.03019 12727 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.909 41.704 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14646 2056 14101 34065 39577 39577 1 MQATADSTK Acetyl (Protein N-term);Oxidation (M) 1009.4386 0.4386251 2279 Q7M6W1 Rtn1 Reticulon yes yes 1 0 1 0 2 1 1 1 32.734 32.734 2 0.0023359 7969 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.812 53.93 0 39.98 55.638 57.37 27.764 19.462 0 38 56 56 28 19 0 1 2 2 1 1 14239 14647 2279 14102 34066;34067 39578;39579 39578 170 2 MQATADSTK Acetyl (Protein N-term) 993.44371 0.44371047 2279 Q7M6W1 Rtn1 Reticulon yes yes 1 0 0 0 2.5 1.12 1 1 1 1 43.853 43.853 2 0.00068241 13505 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.355 54.547 218.21 114.2 18.483 178.65 254.22 57.635 204 112 19 167 251 56 5 2 1 4 4 1 81973 14648 2279 14102 34068;34069;34070;34071 39580;39581;39582;39583;39584 39581 5 MQAYQDIK Unmodified 995.47462 0.47461667 451 P35803;A2AEG6 Gpm6b Neuronal membrane glycoprotein M6-b yes no 0 0 0 0 7 0.816 1 1 1 52.123 52.123 2;3 0.00099568 15504 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.81 80.552 168.1 84.793 168.94 130.59 76.135 136.41 158 93 167 130 83 130 1 1 1 1 1 1 12871 14649 451 14103 34072;34073;34074 39585;39586;39587 39586 3 MQCVAAFAVSAVASQWER Unmodified 2009.9452 0.94515102 2021 Q3V156;Q91XL9;D3Z7I9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 0 11.5 0.5 1 1 93.133 93.133 3 3.2151E-07 29981 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.845 57.689 36.345 28.284 33.282 8.9862 19.461 0 34 28 33 9 19 0 2 2 3 1 1 0 10204 14650 2021 14104 34075;34076 39588;39589;39590;39591 39588 4 MQDIPEETESR Unmodified 1333.582 0.58199487 1115 H3BJU7;H3BJX8;H3BJ45;H3BJ40;H3BKH9;Q60875 Arhgef2 Rho guanine nucleotide exchange factor 2 yes no 0 0 0 0 2 0 1 46.979 46.979 2 4.3475E-08 14784 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 125.72 86.944 29.923 0 20.407 0 27.961 38.644 28 0 19 0 28 37 1 0 1 0 1 1 2948.5 14651 1115 14105 34077 39592 39592 1 MQEDIEMTK Unmodified 1123.4889 0.48894611 1544;502 A2APL5;F6ZRK3;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 5.83 3.34 1 2 1 1 1 55.39 55.39 2;3 4.381E-06 18609 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.24 95.245 439.76 141.52 538.12 419.3 292.66 401.74 413 157 520 418 306 383 5 2 4 6 5 4 102730 14652 502;1544 14106 34078;34079;34080;34081;34082;34083 39593;39594;39595;39596;39597;39598 39598 6 MQEQQADLQR Unmodified 1245.5772 0.57718426 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 3.5 0.5 1 1 37.449 37.449 2 4.1392E-05 10879 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.4 88.149 20.387 50.008 0 41.534 0 0 19 47 0 38 0 0 1 1 0 2 0 0 4736.8 14653 895 14107 34084;34085 39599;39600 39599 2 MQEVYNFNAINNSEIR Unmodified 1940.9051 0.90506034 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 6 0 1 68.212 68.212 3 0.028609 23914 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.202 16.285 0 0 0 38 0 0 0 0 0 38 0 0 0 0 0 1 0 0 5284.4 14654 1446 14108 34086 39601 39601 1 MQHLIAR Unmodified 867.47489 0.47489144 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 10 1.87 1 1 1 1 37.467 37.467 2;3 0.0020076 7874 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.54 75.475 335.89 190.02 193.4 347.2 336.59 221.15 315 195 195 334 343 213 4 3 2 3 3 3 238950 14655 1609 14109 34087;34088;34089;34090 39602;39603;39604;39605;39606 39604 5 MQHNLEQQIQAR Unmodified 1494.7361 0.73614452 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 0.816 1 1 1 41.496 41.496 3 2.9201E-06 11335 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.28 84.84 178.08 99.514 102.2 138.52 180.79 146.06 167 102 102 130 176 139 3 2 2 2 2 2 44739 14656 551 14110 34091;34092;34093 39607;39608;39609 39608 3 MQINAEEVVVGDLVEVK Oxidation (M) 1886.9659 0.96592926 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 1 0 4 0 1 80.575 80.575 3 0.00049569 30277 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.173 38.341 20.387 0 0 20.424 18.258 19.733 19 0 0 19 19 19 1 0 0 1 1 1 1383.7 14657 2253 14111 34094 39610 39610 169 1 MQINAEEVVVGDLVEVK Unmodified 1870.971 0.97101464 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 5 0 2 86.342 86.342 3;4 0.00013741 32937 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.096 43.607 39.701 0 0 40.133 16.362 48.569 37 0 0 37 19 46 1 0 0 1 1 1 8866.9 14658 2253 14111 34095;34096 39611;39612 39611 2 MQLIMLCYNPDFEK Unmodified 1800.8249 0.82488445 1347 P10649 Gstm1 Glutathione S-transferase Mu 1 yes yes 0 0 0 0 10.5 0.5 1 1 86.048 86.048 3 5.0667E-05 27578 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.102 51.968 0 0 30.296 0 28.291 58.889 0 0 28 0 28 56 0 0 1 0 1 2 15726 14659 1347 14112 34097;34098 39613;39614;39615 39613 3 MQLKPMEINPEMLNK Unmodified 1814.9093 0.90928278 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 1 10.2 1.64 2 1 1 71.075 71.075 3;4 2.6529E-05 23198 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.82 41.161 345.77 217.25 467.65 290.03 307.17 364.68 325 231 455 290 310 348 3 3 3 2 3 3 50949 14660 3302 14113 34099;34100;34101;34102 39616;39617;39618;39619 39617 4 MQLLEIITTDK Unmodified 1303.7057 0.70573882 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 9 0 2 86.733 86.733 2;3 0.0028217 30341 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.655 22.247 69.602 36.786 29 20.767 19.564 9.0357 65 38 28 19 19 9 2 2 2 1 1 1 6303.3 14661 2435 14114 34103;34104 39620;39621;39622 39622 3 MQLSGEGAK Unmodified 919.44332 0.44331654 2957 Q9CR62;Q5SX46;Q5SX48 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 10 3 1 1 45.639 45.639 2 0.017587 12731 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.207 19.464 187.67 58.689 147.76 177.45 34.5 38.458 176 65 148 171 37 37 2 1 2 2 1 1 10432 14662 2957 14115 34105;34106 39623;39624 39623 2 MQLWLNDPNNVEK Oxidation (M) 1615.7664 0.7664416 956 H3BKF6;E9QKE9;H3BK24;H3BLS0;H3BJQ9;P53564 Cux1 Homeobox protein cut-like;Homeobox protein cut-like 1 yes no 0 0 1 0 6 0 1 58.728 58.728 4 0.039401 19446 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.577 19.326 39.701 0 0 79.318 83.174 0 37 0 0 74 83 0 1 0 0 1 1 0 4604.5 14663 956 14116 34107 39625 39625 44 1 MQNDAGEFVDLYVPR Acetyl (Protein N-term) 1794.8247 0.82468476 2938 Q9CQR2 Rps21 40S ribosomal protein S21 yes yes 1 0 0 0 8 5 1 1 88.068 88.068 2 1.4321E-31 31682 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 122.42 92.167 29.952 18.196 2.164 9.837 6.276 0 28 19 2 9 6 0 1 1 1 1 1 0 4477.6 14664 2938 14117 34108;34109 39626;39627 39626 2 MQQNIQELEEQLEEEESAR Unmodified 2332.0489 0.048883626 2696 Q8VDD5;A0A2R8VKI5 Myh9 Myosin-9 yes no 0 0 0 0 3 0 1 80.409 80.409 3 4.3148E-12 30349 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.213 74.257 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14665 2696 14118 34110 39628 39628 1 MQSVAAFAVSAVASQWER Unmodified 1936.9465 0.94653123 2476 Q8BX94 Osbpl2 Oxysterol-binding protein-related protein 2 yes yes 0 0 0 0 12 0 1 93.096 93.096 3 0.00011027 26657 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.74 36.823 29.631 0 69.44 16.628 0 29.848 28 0 65 19 0 28 1 0 1 1 0 1 2908.1 14666 2476 14119 34111 39629 39629 1 MQTNQTPPTYNK Unmodified 1421.6609 0.66091389 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 7 0 1 45.079 45.079 3 0.00021579 12245 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.496 55.06 39.062 25.728 85.566 56.108 0 0 37 28 83 56 0 0 1 1 1 1 0 0 8853.4 14667 1151 14120 34112 39630 39630 1 MQTYEVDLNK Unmodified 1239.5805 0.58053831 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 59.923 59.923 2;3 6.2748E-05 20186 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.11 66.682 98.984 70.802 114.09 28.293 94.332 85.786 93 74 111 28 93 83 1 1 2 1 1 1 15050 14668 2918 14121 34113;34114 39631;39632 39631 2 MQVDPQK Unmodified 844.41129 0.41128813 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 44.23 44.23 2;3 0.016964 12663 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.981 19.42 317.77 100.25 218.65 340.07 54.908 99.138 297 102 213 324 56 93 3 2 2 4 1 2 8448 14669 2715 14122 34115;34116 39633;39634;39635;39636 39634 4 MQVDQEEGGHQK Unmodified 1384.6041 0.60412729 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 13 0 1 34.608 34.608 3 0.00077656 8846 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.48 36.466 80.475 0 0 39.57 46.298 0 75 0 0 37 46 0 1 0 0 1 1 0 3007.6 14670 1581 14123 34117 39637 39637 1 MQVNAEEVVVGDLVEIK Oxidation (M) 1886.9659 0.96592926 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 1 0 4.8 0.748 2 2 1 82.337 82.337 3;4 1.6576E-06 30802 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.97 57.815 108.63 82.306 75.405 39.457 45.559 137.28 102 83 75 38 47 130 4 3 3 2 2 4 18689 14671 106 14124 34118;34119;34120;34121;34122 39638;39639;39640;39641;39642 39638 8 5 MQVNAEEVVVGDLVEIK Unmodified 1870.971 0.97101464 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 6.2 2.56 2 4 1 1 1 1 92.785 92.785 3;4 9.9355E-13 32346 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.31 104.34 396.59 167.79 234.66 320.75 230.27 275.12 371 168 234 308 233 262 10 5 9 13 6 9 72892 14672 106 14124 34123;34124;34125;34126;34127;34128;34129;34130;34131;34132 39643;39644;39645;39646;39647;39648;39649;39650;39651;39652;39653;39654;39655;39656;39657;39658;39659;39660 39654 18 MSASQLEALCPQVINAALALAAKPQSK Unmodified 2809.483 0.48301987 1454 P26231 Ctnna1 Catenin alpha-1 yes yes 0 0 0 1 11 0 1 92.021 92.021 4 0.0029986 29527 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.448 30.418 36.36 24.148 0 0 0 45.838 34 25 0 0 0 43 1 1 0 0 0 1 2874.8 14673 1454 14125 34133 39661 39661 1 MSATFIGNSTAIQELFK Unmodified 1856.9342 0.93423521 1795;2283;2975 P68372;Q7TMM9;Q9CWF2 Tubb4b;Tubb2a;Tubb2b Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 7 3.46 1 3 93.696 93.696 3 2.8283E-19 32629 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.96 5.5115 54.545 12.926 47.36 63.721 8.9954 29.848 51 14 47 60 9 28 2 1 3 3 1 1 401400 14674 1795;2283;2975 14126 34134;34135;34136;34137 39662;39663;39664;39665 39662 4 MSATFIGNSTAIQELFK Oxidation (M) 1872.9291 0.92914983 1795;2283;2975 P68372;Q7TMM9;Q9CWF2 Tubb4b;Tubb2a;Tubb2b Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 1 0 9.67 1.11 1 2 1 2 84.837 84.837 3 7.4626E-18 26051 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.87 15.209 216.55 79.992 146.19 221.34 204.88 154.9 203 88 143 214 206 148 5 3 3 5 4 3 182020 14675 1795;2283;2975 14126 34138;34139;34140;34141;34142;34143 39666;39667;39668;39669;39670;39671 39670 151 6 MSATFIGNSTAIQELFK Deamidation (N) 1857.9183 0.91825079 1795;2283;2975 P68372;Q7TMM9;Q9CWF2 Tubb4b;Tubb2a;Tubb2b Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 1 0 0 13 0 1 94.793 94.793 4 5.6351E-06 37940 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.451 7.7941 0 0 87.349 55.145 45.583 0 0 0 83 56 46 0 0 0 1 1 1 0 7974.5 14676 1795;2283;2975 14126 34144 39672 39672 723 1 MSATFIGNSTAIQELFKR Unmodified 2013.0353 0.035346234 1795;2283;2975 P68372;Q7TMM9;Q9CWF2 Tubb4b;Tubb2a;Tubb2b Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 1 11 0 1 80.275 80.275 3 4.1182E-07 24728 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.36 4.8049 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 0 0 0 36697 14677 1795;2283;2975 14127 34145 39673 39673 1 MSDEEILEK Unmodified 1092.5009 0.500891 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 0 3.67 0.471 1 2 59.163 59.163 2;3 0.0017954 20617 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.465 31.304 78.614 93.99 94.242 73.746 80.755 147.18 74 92 93 74 83 139 2 2 2 2 2 2 13480 14678 1099 14128 34146;34147;34148 39674;39675;39676 39675 3 MSDGLFLQK Unmodified 1037.5216 0.52156686 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 10 2.16 1 1 1 67.76 67.76 3 0.001739 22339 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.827 35.798 504.26 381.8 585.84 268.11 375.18 777.07 475 400 576 269 386 739 3 3 3 2 2 3 60409 14679 307 14129 34149;34150;34151 39677;39678;39679 39677 3 MSESLDTADPAVTGAK Oxidation (M) 1607.7349 0.7348667 1761 P63011 Rab3a Ras-related protein Rab-3A yes yes 0 0 1 0 3.5 0.5 1 1 51.271 51.271 3 8.6065E-05 16891 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.734 65.895 69.146 93.372 54.909 127.89 0 178.02 65 93 56 120 0 167 1 2 1 2 0 2 24349 14680 1761 14130 34152;34153 39680;39681 39681 135 2 MSESLDTADPAVTGAK Unmodified 1591.74 0.73995207 1761 P63011 Rab3a Ras-related protein Rab-3A yes yes 0 0 0 0 7 4.28 1 2 1 2 57.84 57.84 2;3;4 1.069E-23 19914 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.58 112.47 753.65 549.85 367.4 692.77 473.34 692.44 707 565 360 662 489 661 6 5 3 6 4 4 189250 14681 1761 14130 34154;34155;34156;34157;34158;34159 39682;39683;39684;39685;39686;39687 39687 6 MSESLETDPAITAAK Unmodified 1562.7498 0.74978848 1743 P62823;A0A286YDR2 Rab3c Ras-related protein Rab-3C yes no 0 0 0 0 7.33 4.03 1 1 1 61.213 61.213 3;4 3.7038E-08 21641 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.74 90.488 187.76 69.654 123.55 92.022 157.03 116.8 176 74 121 93 158 112 3 2 2 2 3 2 17669 14682 1743 14131 34160;34161;34162 39688;39689;39690 39688 3 MSGDWELEVNGTEAK Deamidation (N) 1665.7192 0.71921663 2676 Q8R5L1;O35658 C1qbp Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 1 0 0 4 0 1 69.697 69.697 3 0.0016579 25280 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.377 41.996 29.63 37.805 37.616 0 0 0 28 38 37 0 0 0 1 1 1 0 0 0 4663.2 14683 2676 14132 34163 39691 39691 965 1 MSGLVFFPR Unmodified 1052.5477 0.54772204 870 Q8C163;E9PZS5 Exog Nuclease EXOG, mitochondrial yes no 0 0 0 0 12 0 1 75.594 75.594 2 0.011707 20050 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.248 45.04 79.402 0 0 89.163 82.722 0 74 0 0 83 83 0 1 0 0 1 1 0 5271 14684 870 14133 34164 39692 39692 1 MSINAEDVVVGDLVEVK Unmodified 1815.9288 0.92881548 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 6.67 2.98 1 2 1 1 1 84.961 84.961 3 7.2479E-07 31575 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.88 84.024 138.57 132.4 67.241 59.442 160.23 174.52 130 130 65 56 159 168 5 4 2 3 5 6 36361 14685 2699 14134 34165;34166;34167;34168;34169;34170 39693;39694;39695;39696;39697;39698;39699 39697 7 MSISEGTVSDK Unmodified 1152.5333 0.53325376 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 3.56 1 1 1 51.071 51.071 2 6.8336E-10 16201 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.34 66.169 29.532 46.169 46.853 0 46.148 57.313 28 46 46 0 46 55 1 1 1 0 1 1 5228.6 14686 1382 14135 34171;34172;34173 39700;39701;39702 39701 3 MSLFYAEATPMLK Unmodified 1500.7357 0.73565874 2800;2410 Q921M7;Q8BHZ0 Fam49b;Fam49a Protein FAM49B;Protein FAM49A no no 0 0 0 0 10.5 0.5 1 1 83.344 83.344 3 9.5755E-05 26038 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.506 62.633 61.597 31.366 80.506 62.393 30.587 33.239 58 32 79 62 32 32 2 1 2 2 1 1 14191 14687 2800;2410 14136 34174;34175 39703;39704 39704 2 MSLHNLATVFGPTLLRPSEVESK Unmodified 2525.3312 0.3311939 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 1 11 0 1 76.967 76.967 4 3.2423E-06 23174 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.306 36.248 108.79 0 109.82 0 116.11 0 102 0 102 0 111 0 1 0 1 0 1 0 12312 14688 816 14137 34176 39705 39705 1 MSLVEEGAVK Unmodified 1061.5427 0.54269624 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6 0 1 59.663 59.663 3 0.013414 20005 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.284 24.165 39.29 26.361 46.784 27.13 36.466 28.807 37 28 46 28 37 28 1 1 1 1 1 1 1874.1 14689 3331 14138 34177 39706 39706 1 MSMKEVDEQMLNVQNK Unmodified 1922.89 0.8900039 1795;2283;1863;2975 P99024;P68372;Q7TMM9;Q9CWF2 Tubb5;Tubb4b;Tubb2a;Tubb2b Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 1 10 3 1 1 65.39 65.39 3 7.155E-05 23416 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.666 77.276 59.794 37.561 157.58 0 94.991 96.427 56 37 148 0 93 93 1 1 2 0 1 2 14305 14690 1863;1795;2283;2975 14139 34178;34179 39707;39708 39708 2 MSNIYESAANTLGIFNSPCLTK Unmodified 2430.1559 0.15593165 2428 Q9D6C8;Q8BLR2;A0A1L1SSY1;D3Z5V2;Q8CEQ2 Cpne4 Copine-4 yes no 0 0 0 0 10 0 2 89.91 89.91 3;4 6.2697E-05 29168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.776 43.101 20.387 19 0 0 29.288 0 19 19 0 0 28 0 1 1 0 0 1 0 2034.6 14691 2428 14140 34180;34181 39709;39710 39709 2 MSPDAMNALFKPTIDSIIEHLR Unmodified 2498.2662 0.26615081 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 1 10 0 1 95.541 95.541 4 0.00043813 31186 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.955 29.012 0 0 29.791 11.34 0 17.056 0 0 28 12 0 16 0 0 1 1 0 1 3996.7 14692 2585 14141 34182 39711 39711 1 MSPLSIVTVLVDK Unmodified 1400.7949 0.79488818 3305 Q9R0X4 Acot9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 0 0 0 0 11 0.707 1 2 1 99.083 99.083 2;3 5.4761E-19 32619 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.26 86.545 39.524 0 29.761 35.531 37.368 28.782 37 0 28 37 37 28 1 0 1 3 2 2 12417 14693 3305 14142 34183;34184;34185;34186 39712;39713;39714;39715 39713 4 MSSELFTLTYGALVTQLCK Unmodified 2161.0799 0.079913165 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 0 11 0 1 101.53 101.53 3 3.0313E-07 33562 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.732 52.929 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 2831.1 14694 1227 14143 34187 39716 39716 1 MSSTFIGNSTAIQELFK Unmodified 1872.9291 0.92914983 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 0 0 9.57 2.3 1 2 6 6 3 2 1 87.118 87.118 3 2.0491E-19 30124 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.813 0 470.92 274.85 420.08 419.64 552.06 330.98 444 270 412 409 550 321 9 10 9 9 8 5 284850 14695 3183 14144 34188;34189;34190;34191;34192;34193;34194;34195;34196;34197;34198;34199;34200;34201;34202;34203;34204;34205;34206;34207;34208 39717;39718;39719;39720;39721;39722;39723;39724;39725;39726;39727;39728;39729;39730;39731;39732;39733;39734;39735;39736;39737;39738;39739;39740 39725 24 MSSTFIGNSTAIQELFK Oxidation (M) 1888.9241 0.92406445 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 1 0 9.25 2.28 1 1 1 1 82.222 82.222 3 1.8588E-07 29814 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.078 59.714 59.594 94.324 36.436 59.627 84.079 49.036 56 93 37 56 83 46 1 2 1 1 1 1 12553 14696 3183 14144 34209;34210;34211;34212 39741;39742;39743;39744 39741 198 4 MSSYAFFVQTCR Unmodified 1495.6588 0.6588054 116 A0A0J9YUD8;A0A0J9YUZ4;P63158;D3YZ18;D3YVC6;A0A1B0GQX9;P30681 Hmgb1;Hmgb2 High mobility group protein B1;High mobility group protein B2 yes no 0 0 0 0 10.3 0.471 2 1 69.512 69.512 2;3 1.9438E-11 20340 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.28 25.183 89.059 29.315 28.537 69.275 132.8 56 83 28 28 65 130 56 1 1 1 1 2 1 19167 14697 116 14145 34213;34214;34215 39745;39746;39747 39746 3 MSVEEVCR Unmodified 1008.4369 0.43685096 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7 3.54 1 1 1 1 43.904 43.904 2 0.00088028 13088 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.04 14.23 613.06 0 548.19 352.15 707.72 363.52 574 0 524 348 704 352 4 0 5 2 5 4 246590 14698 106 14146 34216;34217;34218;34219 39748;39749;39750;39751;39752 39752 5 MSVIEEGDCK Unmodified 1166.4948 0.49475977 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 4.5 0.5 1 1 54.082 54.082 2;3 0.0025749 17924 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.958 36.102 39.342 0 60.394 0 65.675 67.416 37 0 56 0 65 65 1 0 1 0 1 1 2699.3 14699 2555 14147 34220;34221 39753;39754 39754 2 MSVIWDK Unmodified 877.43677 0.4367746 1158;836 O08553;Q3TT92;E9PWE8;Q62188;D3YUS0 Dpysl2;Dpysl3 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 3 no no 0 0 0 0 10.2 1.57 1 1 2 1 1 67.605 67.605 2;3 0.0082148 21499 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.12 41.031 1037.8 2083.5 3379.8 2899.6 3764.2 4255.5 975 2037 3356 2888 3854 4115 4 3 5 4 6 7 839290 14700 1158;836 14148 34222;34223;34224;34225;34226;34227 39755;39756;39757;39758;39759;39760;39761 39756 7 MSVQPTVSLGGFEITPPVVLR Unmodified 2226.2082 0.20822522 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 9 0.816 1 1 1 90.417 90.417 3 9.7437E-09 31914 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.405 59.364 0 0 9.3321 18.112 46.286 29.041 0 0 9 18 46 28 0 0 1 2 3 1 11798 14701 2056 14149 34228;34229;34230 39762;39763;39764;39765;39766 39764 5 MSYLLLPLDSSK Unmodified 1365.7214 0.72138888 2261 Q6ZPE2;F6S251 Sbf1 Myotubularin-related protein 5 yes no 0 0 0 0 10.5 0.5 1 1 85.215 85.215 3 0.0031056 27305 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.555 28.568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5010.3 14702 2261 14150 34231;34232 39767;39768 39767 2 MTAMDNASK Unmodified 967.4103 0.41030186 484;2493 A2AKU9;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 8.67 3.09 1 1 1 44.648 44.648 2 0.0024364 13465 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.06 65.368 99.066 27.151 98.497 0 66.701 67.387 93 28 93 0 65 65 2 1 2 0 1 2 6068.7 14703 484;2493 14151 34233;34234;34235 39769;39770;39771 39771 3 MTDEEILEK Unmodified 1106.5165 0.51654107 2106 Q61036;A3KGC5 Pak3 Serine/threonine-protein kinase PAK 3 yes no 0 0 0 0 4 0 1 60.185 60.185 3 0.026695 21177 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.606 19.508 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 2926.2 14704 2106 14152 34236 39772 39772 1 MTDIMTEGITIVEDINK Unmodified 1921.9377 0.9376656 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 100.89 100.89 3 1.5616E-06 40768 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.39 82.551 32.004 54.287 88.489 69.092 60.998 70.747 30 54 88 66 63 68 3 6 5 3 3 5 12724 14705 1160 14153 34237;34238;34239;34240 39773;39774;39775;39776;39777;39778;39779 39778 7 MTDIMTEGITIVEDINKR Unmodified 2078.0388 0.038776632 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 1 8.67 3.09 2 2 2 93.361 93.361 3;4 1.1776E-18 35329 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.28 117.78 69.302 54.299 56.278 107.82 120.58 184.18 65 56 56 103 120 176 2 3 2 4 3 6 22059 14706 1160 14154 34241;34242;34243;34244;34245;34246 39780;39781;39782;39783;39784;39785 39781 6 MTDQEAIQDLWQWR Unmodified 1818.8359 0.83591814 2056 Q5SQB0;Q61937 Npm1 Nucleophosmin yes no 0 0 0 0 8 2.92 2 1 1 84.883 84.883 2;3 1.8341E-11 33187 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.31 91.179 79.593 63.9 94.124 64.25 112.19 67.413 75 65 93 65 112 65 3 2 2 2 3 2 21612 14707 2056 14155 34247;34248;34249;34250 39786;39787;39788;39789 39789 4 MTDSFTEQADQVTADVGK Unmodified 1941.8626 0.86258641 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;D3Z099 Qdpr Dihydropteridine reductase yes no 0 0 0 0 4.4 1.02 1 2 1 1 70.145 70.145 3;4 1.6964E-07 25376 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.891 83.011 107.38 67.144 38.613 67.359 73.64 49.338 103 65 37 65 74 47 3 2 1 2 2 2 40022 14708 2464 14156 34251;34252;34253;34254;34255 39790;39791;39792;39793;39794 39791 5 MTFTSNK Unmodified 827.38474 0.38473903 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 9.5 1.12 1 1 1 1 48.813 48.813 2 0.008866 12538 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.5 71.096 877.3 469.48 784.79 695.09 770.67 872.38 824 493 782 692 790 839 4 3 4 4 3 3 52943 14709 852 14157 34256;34257;34258;34259 39795;39796;39797;39798;39799 39797 5 MTGSEFDFEEMKR Unmodified 1605.6803 0.68032871 2132 Q61598 Gdi2 Rab GDP dissociation inhibitor beta yes yes 0 0 0 1 5 0 1 63.074 63.074 3 0.037183 22174 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.789 23.714 88.836 0 37.484 47.18 45.949 0 83 0 37 46 46 0 1 0 1 1 1 0 2717.5 14710 2132 14158 34260 39800 39800 1 MTHNLLLNYGLYR Unmodified 1606.829 0.82898227 148 A0A0R4J008;P70288;Q8BQ10;D3YYI8;O09106 Hdac2;Gm10093;Hdac1 Histone deacetylase 2;Histone deacetylase;Histone deacetylase 1 yes no 0 0 0 0 11 0 1 64.624 64.624 3 0.010162 17514 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.28 24.617 0 44.688 0 0 0 39.442 0 42 0 0 0 37 0 1 0 0 0 1 6589.7 14711 148 14159 34261 39801 39801 1 MTIAGTTDTPTDVTHHPIPSEEDINFILNEVR Unmodified 3562.725 0.7249773 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 5 0 1 82.088 82.088 4 2.9423E-06 31121 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.325 34.714 0 9.576 0 0 8.727 20.005 0 9 0 0 9 19 0 1 0 0 1 1 3948.7 14712 2179 14160 34262 39802 39802 1 MTLVASEDYGDTLAAIQGLLK Unmodified 2208.1348 0.13478551 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.57 1.84 1 1 2 1 1 1 101.72 101.72 3;4 3.4782E-23 35945 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.67 105.52 25.625 82.054 129.15 154.66 86.042 97.725 24 81 126 149 88 93 2 3 4 6 4 4 61625 14713 551 14161 34263;34264;34265;34266;34267;34268;34269 39803;39804;39805;39806;39807;39808;39809;39810;39811;39812 39804 10 MTNGFSGADLTEICQR Deamidation (N) 1799.7818 0.78183366 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 1 0 0 4.67 0.471 1 2 68.681 68.681 3 0.00010511 24848 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.636 70.845 20.149 19.222 99.371 0 28.62 49.285 19 19 93 0 28 47 1 1 2 0 1 2 6001.8 14714 1875 14162 34270;34271;34272 39813;39814;39815 39815 759 3 MTNTNLAVVFGPNLLWAK Unmodified 1988.0554 0.055353395 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 8.33 5.19 1 2 94.981 94.981 3;4 1.2749E-07 33238 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.67 88.494 56.48 41.056 53.094 15.744 68.874 57.731 53 43 51 15 68 56 4 5 3 2 4 4 10566 14715 2047 14163 34273;34274;34275 39816;39817;39818;39819;39820 39816 5 MTPGCEAEAEAEALCFFIK Unmodified 2172.953 0.95299809 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 1 93.231 93.231 3 0.051223 35301 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 29.384 13.792 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 873.65 14716 1412 14164 34276 39821 39821 1 MTPLSFIPGAK Unmodified 1160.6264 0.62636629 140 E9Q026;A0A0N4SW93;Q7TPS5 C2cd5 C2 domain-containing protein 5 yes no 0 0 0 0 11 0 1 78.374 78.374 3 0.0014976 23834 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.353 29.345 0 0 8.397 30.104 0 0 0 0 9 28 0 0 0 0 1 1 0 0 1939.2 14717 140 14165 34277 39822 39822 1 MTPPLPAR Unmodified 881.47931 0.47930812 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 11 2 1 1 48.937 48.937 2 0.012521 15747 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.046 47.154 306.95 198.97 0 253 88.515 325.8 287 197 0 233 93 308 2 1 0 2 1 2 34230 14718 1304 14166 34278;34279 39823;39824 39824 2 MTQALPR Unmodified 815.43236 0.43235793 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 10.5 2.5 1 1 42.276 42.276 2 0.0071795 10402 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.68 66.704 334.13 638.76 858.28 699.17 785.36 1050 315 635 859 700 816 1006 1 2 2 2 2 2 112090 14719 1282 14167 34280;34281 39825;39826 39825 2 MTSACHR Unmodified 861.35854 0.35854106 1707 P62073 Timm10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 0 6.5 0.5 1 1 19.928 19.928 3 0.0053135 2964 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.777 57.936 0 24.274 11.869 12.409 0 14.924 0 23 12 12 0 14 0 2 1 1 0 1 2247.5 14720 1707 14168 34282;34283 39827;39828 39828 2 MTVAHMWFDNQIHEADTTEDQSGTSFDK Unmodified 3240.3764 0.37644213 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 9 2.83 2 1 69.715 69.715 4;5 7.9498E-22 23969 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.847 57.454 118.47 102.1 125.79 46.381 132.67 184.75 111 102 121 46 130 177 2 2 2 1 2 3 33029 14721 106 14169 34284;34285;34286 39829;39830;39831;39832 39830 4 MTVNESEQLVSCSMDDTVR Unmodified 2199.9446 0.94461825 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 4.5 0.5 1 1 68.571 68.571 3 1.9388E-30 24664 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.54 95.247 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 2059.2 14722 1263 14170 34287;34288 39833;39834 39833 2 MTVVQAYIGGTHYR Unmodified 1594.7926 0.79259677 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 8 4.97 1 1 1 60.245 60.245 3 2.9138E-05 15688 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.888 58.507 0 77.282 86.957 34.1 46.55 0 0 74 83 32 46 0 0 2 1 1 1 0 17314 14723 928 14171 34289;34290;34291 39835;39836;39837 39836 3 MTVVQAYINEK Unmodified 1294.6591 0.65912298 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 0 10 1.87 1 1 1 1 69.47 69.47 2;3 5.5818E-08 22404 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.08 84.551 127.95 84.73 105.77 95.186 237.73 290.63 120 83 102 92 241 279 3 2 2 2 4 4 35551 14724 1096 14172 34292;34293;34294;34295 39838;39839;39840;39841 39839 4 MTVVQAYVGDVHYK Unmodified 1608.797 0.79701344 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 10 1.87 1 1 1 1 65.791 65.791 3 5.3834E-17 21391 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.83 79.283 88.378 31.947 87.444 0 0 78.884 83 37 83 0 0 74 1 1 1 0 0 1 3849.5 14725 1042 14173 34296;34297;34298;34299 39842;39843;39844;39845 39842 4 MTVVQSYLGDTHYK Unmodified 1640.7868 0.78684269 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 9 0 1 64.483 64.483 3 2.3124E-11 20071 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.3 91.327 0 0 97.721 65.221 0 88.478 0 0 93 65 0 83 0 0 1 1 0 1 14199 14726 487 14174 34300 39846 39846 1 MTVVWDK Unmodified 877.43677 0.4367746 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 10.4 2.15 1 2 2 64.122 64.122 2;3 0.0069892 19955 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.784 43.546 531.93 657.34 285.5 602.95 336.04 733.14 498 656 289 573 342 695 4 5 2 4 2 4 104100 14727 1850;2212 14175 34301;34302;34303;34304;34305 39847;39848;39849;39850;39851 39849 5 MTYIGEIFTK Unmodified 1201.6053 0.60529649 2090 Q60854;K7E6F1;F8WIV2 Serpinb6;Serpinb6a Serpin B6 yes no 0 0 0 0 10 0 1 80.074 80.074 3 0.0013174 25150 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.006 48.401 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 5526.5 14728 2090 14176 34306 39852 39852 1 MVALLNK Unmodified 787.4626 0.46259542 1878 Q02248;E9Q6A9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 11.5 0.5 1 1 64.858 64.858 2 0.010977 15837 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.96 53.965 59.76 65.13 139 0 0 84.214 56 65 139 0 0 79 1 1 1 0 0 1 35398 14729 1878 14177 34307;34308 39853;39854 39854 2 MVCDVVSR Unmodified 964.44702 0.44702171 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 8.33 3.4 1 1 1 46.804 46.804 2 0.0070934 14543 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.36 38.375 574.22 413.24 523.86 540.54 690.81 604.16 540 433 532 535 704 582 3 3 3 3 3 2 98366 14730 1411 14178 34309;34310;34311 39855;39856;39857 39857 3 MVEGFFDR Unmodified 999.4484 0.44840192 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 66.538 66.538 2 0.0023221 22402 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.69 84.551 340.44 81.995 60.705 452.52 620.18 493.98 318 83 65 428 629 480 2 1 1 3 3 3 105530 14731 1458 14179 34312;34313;34314 39858;39859;39860 39859 3 MVEVDLHGR Unmodified 1054.523 0.52296385 123 A0A0N4SUS4;B2RRD7;A0A0N4SVG7;E9PXP1;Q80XK2;Q3U109;A0A0N4SUT9 Brpf1 yes no 0 0 0 0 1 0 1 42.952 42.952 2 0.052134 12101 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.504 6.0627 0 0 29.465 18.653 19.017 0 0 0 28 19 19 0 0 0 1 1 1 0 3145.8 14732 123 14180 34315 39861 39861 1 MVFCPYYDAILSK Unmodified 1605.7571 0.75712246 2453 Q8BTG3 Tcp11l1 T-complex protein 11-like protein 1 yes yes 0 0 0 0 10 0 1 84.794 84.794 3 0.0048954 27029 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.145 29.192 0 0 0 0 67.031 27.935 0 0 0 0 65 28 0 0 0 0 1 1 1680.5 14733 2453 14181 34316 39862 39862 1 MVFINNIALAQMK Unmodified 1491.7942 0.79417667 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 1 0 1 83.825 83.825 3 7.8407E-05 29446 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.286 64.314 0 0 0 0 18.208 48.516 0 0 0 0 19 46 0 0 0 0 1 1 2497.7 14734 2235 14182 34317 39863 39863 1 MVGNSGK Unmodified 691.33231 0.33230953 808 F7D432;E9PWE0;E0CYV0;P23506;F6V9F1 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 8 0 1 36.914 36.914 2 0.055021 7810 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.213 42.603 48.693 55.215 64.955 40.772 67.145 91.892 46 56 65 42 69 88 1 1 1 1 1 1 6183.2 14735 808 14183 34318 39864 39864 1 MVGTVIMMK Unmodified 1008.517 0.51701553 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 12 1 1 1 69.962 69.962 2 0.0012379 20059 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 104.44 61.191 381.99 0 0 287.88 326.26 104.84 356 0 0 269 328 102 2 0 0 2 2 1 34932 14736 1737 14184 34319;34320 39865;39866 39865 2 MVHETSYSAQFK Unmodified 1426.6551 0.65510023 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 7 0 1 48.183 48.183 3 0.0081371 13671 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.632 33.282 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14737 2295 14185 34321 39867 39867 1 MVIGMDVAASEFYR Unmodified 1587.7425 0.74253503 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 9.67 2.43 1 2 1 2 79.781 79.781 2;3 1.1015E-21 28604 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 142.1 114.32 120.56 61.345 103.43 75.034 188.47 125.85 113 65 102 74 186 121 4 3 3 2 4 3 25843 14738 1399 14186 34322;34323;34324;34325;34326;34327 39868;39869;39870;39871;39872;39873;39874 39868 7 MVIGTMLVK Unmodified 990.56059 0.56059491 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 6.5 5.5 1 1 73.638 73.638 2 0.00047705 25109 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 124.98 66.066 29.559 26.815 58.834 0 0 39.442 28 28 56 0 0 37 1 1 1 0 0 1 3488.7 14739 3249 14187 34328;34329 39875;39876 39875 2 MVIPGGIDVHTHFQMPYK Unmodified 2069.0227 0.022673058 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 10 0 1 69.223 69.223 4 0.0030255 20175 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.314 24.176 59.814 0 46.075 76.232 101.24 56.807 56 0 46 74 102 56 1 0 1 1 1 1 5138.2 14740 836 14188 34330 39877 39877 1 MVIPGGIDVHTR Oxidation (M) 1309.6813 0.6812554 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 0 7.67 0.471 1 2 53.797 53.797 3 0.004348 16540 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.802 35.062 128.6 71.607 145.78 46.35 105.71 116.98 121 74 139 46 102 111 3 2 2 1 2 2 29381 14741 1158 14189 34331;34332;34333 39878;39879;39880 39878 56 3 MVIPGGIDVHTR Unmodified 1293.6863 0.68634078 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 9.6 2.15 1 1 1 1 1 56.01 56.01 2;3 9.1378E-21 18998 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.55 115.36 468.58 372.86 433.4 268.37 414.99 389.01 440 380 430 260 420 375 5 4 5 2 4 4 415890 14742 1158 14189 34334;34335;34336;34337;34338 39881;39882;39883;39884;39885;39886 39886 6 MVIPGGIDVNTYLQKPSQGMTSADDFFQGTK Unmodified 3344.6057 0.60571378 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 9 0.816 1 1 1 86.959 86.959 4 4.5985E-06 30467 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.967 44.125 0 20.216 30.296 20.43 17.928 89.032 0 19 28 19 19 84 0 1 1 1 1 3 17260 14743 1850;2212 14190 34339;34340;34341 39887;39888;39889 39888 3 MVISNPAATHQDIDFLIEEIER Unmodified 2540.2581 0.25808854 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 5 0 2 88.533 88.533 3;4 0.0035152 33787 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.015 19.073 15.022 0 0 0 0 14.924 14 0 0 0 0 14 1 0 0 0 0 1 1806.2 14744 1579 14191 34342;34343 39890;39891 39891 2 MVISNPAATQSDIDFLIEEIER Unmodified 2490.2312 0.23120509 1578 P48318 Gad1 Glutamate decarboxylase 1 yes yes 0 0 0 0 8 3.56 1 1 1 101.14 101.14 3 2.3204E-23 37346 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.86 105.48 9.612 38.406 18.789 14.04 8.9699 9.594 9 37 19 13 9 9 2 3 1 2 1 1 6083.8 14745 1578 14192 34344;34345;34346 39892;39893;39894 39893 3 MVLAAAGGVEHQQLLDLAQK Unmodified 2091.1147 0.11465919 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 6 3.56 1 1 1 73.195 73.195 4;5 0.01294 24959 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 33.836 7.6878 129.05 55.551 85.175 175.48 105.12 135.58 121 56 83 167 111 130 3 1 2 3 2 2 31693 14746 2998 14193 34347;34348;34349 39895;39896;39897 39895 3 MVLCYLIR Unmodified 1066.5667 0.56674292 1079 H7BX46;G3X932;P59281 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 1 0 1 78.341 78.341 2 0.047765 27315 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.547 39.728 39.531 0 28.649 32.489 41.455 28.665 37 0 28 32 42 28 1 0 1 1 1 1 2184.8 14747 1079 14194 34350 39898 39898 1 MVLPVDESLTEALGIR Unmodified 1741.9284 0.92842155 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 7 0 1 92.374 92.374 3 0.018224 34216 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.613 16.138 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14748 677 14195 34351 39899 39899 1 MVLVDLPGVINTVTSGMAPDTK Unmodified 2257.1698 0.1697908 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 10 0 1 99.725 99.725 3 4.4896E-16 32603 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.55 76.294 0 6.384 0 22.953 0 9.594 0 6 0 21 0 9 0 1 0 1 0 1 1099.7 14749 1653 14196 34352 39900 39900 1 MVLVDLPGVINTVTSGMAPDTK Deamidation (N) 2258.1538 0.15380639 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 1 0 0 11 0 1 99.753 99.753 3 0.0083304 32875 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.381 32.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1685.7 14750 1653 14196 34353 39901 39901 634 1 MVNFLLK Unmodified 863.4939 0.49389555 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 6.5 5.5 1 1 76.939 76.939 2 0.0073398 20606 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 129.29 35.122 521.65 243.69 485.43 411.37 52.405 657.29 490 259 475 399 56 618 4 3 3 3 1 4 72960 14751 3449;3451;3452 14197 34354;34355 39902;39903;39904;39905 39904 4 MVNHFIAEFK Deamidation (N) 1235.6009 0.60087982 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 1 0 0 7 0 1 68.666 68.666 3 0.0071106 23325 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.542 41.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14752 1762 14198 34356 39906 39906 692 1 MVNHFIAEFK Unmodified 1234.6169 0.61686423 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 10 2.16 1 1 1 66.871 66.871 3 9.8571E-06 21185 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.69 80.598 845.01 733.58 1336.3 883.29 942.48 1243.8 796 764 1316 877 969 1192 2 3 3 2 2 3 240380 14753 1762 14198 34357;34358;34359 39907;39908;39909 39908 3 MVNHFIAEFKR Unmodified 1390.718 0.71797526 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 12 0 1 60.749 60.749 4 0.048468 14467 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 37.6 26.229 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 0 5244 14754 1762 14199 34360 39910 39910 1 MVNSNLASVEELKEIDVEVR Unmodified 2273.1573 0.15731186 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 6 0.707 1 2 1 75.702 75.702 3;4 3.4835E-10 27439 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.725 78.298 89.717 131.21 0 60.748 53.759 108.03 84 129 0 56 56 102 2 3 0 1 2 2 16538 14755 1520 14200 34361;34362;34363;34364 39911;39912;39913;39914 39913 4 MVPDFYVDSIADLLPALQG Unmodified 2063.0285 0.028529522 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 10 3 1 1 122.33 122.33 3 2.1973E-05 38783 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.489 50.831 4.292 2.128 0 4.372 0 9.132 4 2 0 4 0 9 1 1 0 2 0 2 2674.5 14756 2547 14201 34365;34366 39915;39916;39917 39915 3 MVPEEEQELR Unmodified 1258.5864 0.58635197 3392 Q9Z275;A0A0U1RPV9;A0A0U1RP66;A0A0U1RNL2;A0A0U1RQ07 Rlbp1 Retinaldehyde-binding protein 1 yes no 0 0 0 0 2.5 0.5 1 1 49.812 49.812 2 0.00016541 16073 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.688 66.567 39.402 45.673 27.669 18.583 28.434 0 37 47 28 19 28 0 1 2 1 1 1 0 5342.5 14757 3392 14202 34367;34368 39918;39919 39918 2 MVPVSVQQSLAVFSQR Unmodified 1774.94 0.93998929 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 11.5 0.5 1 1 81.354 81.354 3 1.4151E-11 25231 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.21 72.953 0 130 0 50.278 0 69.29 0 130 0 46 0 65 0 1 0 1 0 1 22313 14758 3327 14203 34369;34370 39920;39921 39920 2 MVQEAEK Unmodified 833.3953 0.39530372 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 7 3.54 1 1 1 1 41.47 41.47 2;3 0.0056192 11883 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.55 61.318 1762 864.51 512.79 1344 780.92 1787.8 1649 914 513 1271 791 1698 4 3 2 4 2 4 178670 14759 1762 14204 34371;34372;34373;34374 39922;39923;39924;39925 39923 4 MVSADAYK Unmodified 883.41095 0.41095378 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8.5 2.69 1 1 1 1 49.855 49.855 2;3 0.004198 15425 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.29 54.488 413.02 436.61 539.61 319.45 715.38 671.75 389 445 538 334 720 645 3 4 4 4 4 3 61145 14760 1390 14205 34375;34376;34377;34378 39926;39927;39928;39929 39926 4 MVSDINNAWGCLEQAEK Unmodified 1963.8768 0.87679668 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 6 0 1 79.232 79.232 3 0.04896 29025 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 30.684 11.473 0 19.914 18.063 29.179 18.534 0 0 19 19 28 19 0 0 1 1 1 1 0 3585 14761 418 14206 34379 39930 39930 1 MVSGFIPMKPSVK Unmodified 1419.7618 0.76181391 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 1 1 0 1 68.224 68.224 3 0.045082 23109 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.789 24.693 39.469 0 39.052 17.568 46.329 28.526 37 0 37 19 46 28 1 0 1 1 1 1 1483.2 14762 2141 14207 34380 39931 39931 1 MVSGMYMGELVR Unmodified 1371.6349 0.63489884 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 8.5 0.5 1 1 70.221 70.221 2 0.0064198 22682 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.073 39.754 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4480.9 14763 1055 14208 34381;34382 39932;39933 39933 2 MVSPIESAEDLSK Unmodified 1404.6806 0.68064628 1104 G5E8H1 Gria2 no no 0 0 0 0 5.5 0.5 1 1 67.713 67.713 3 1.183E-06 23593 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.486 51.348 0 29.152 38.285 0 58.576 0 0 28 37 0 56 0 0 1 1 0 1 0 6791.1 14764 1104 14209 34383;34384 39934;39935 39935 2 MVTGDNINTAR Unmodified 1190.5714 0.5713706 1042;1096;487 G5E829;A0A1W2P867;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55 Atp2b1;Atp2b2;Atp2b3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 7.75 3.11 1 1 1 1 42.789 42.789 2 6.8447E-10 12005 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.52 107.43 177.81 133.91 157.57 190.13 201.03 135.77 167 139 157 186 205 130 3 3 3 4 4 2 41907 14765 1096;1042;487 14210 34385;34386;34387;34388 39936;39937;39938;39939 39937 4 MVVDSAYEVIK Unmodified 1252.6373 0.6373249 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 0 8 2.61 2 1 1 1 70.138 70.138 2;3 8.403E-09 23447 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.78 77.249 177.89 415.37 403.87 476.09 356 379.73 167 408 404 458 366 364 2 5 3 4 3 3 126780 14766 1389 14211 34389;34390;34391;34392;34393 39940;39941;39942;39943;39944 39943 5 MVVLSLPR Unmodified 913.54191 0.54190838 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6.5 5.5 1 1 67.708 67.708 2 0.0046104 16883 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.18 86.118 0 67.789 81.993 84.075 93.416 0 0 65 83 83 93 0 0 1 1 1 1 0 11173 14767 3204 14212 34394;34395 39945;39946 39946 2 MVVPAALK Unmodified 827.4939 0.49389555 1416 P19253;A0A1B0GSB2;A0A1B0GSQ6;A0A1B0GTA1;A0A1B0GS68;A0A1B0GQW6;A0A1B0GSF0 Rpl13a 60S ribosomal protein L13a yes no 0 0 0 0 10 0 1 62.554 62.554 2 0.0022239 17157 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.16 63.541 147.96 96.574 118.29 112.44 97.229 125.15 139 102 120 111 102 120 1 1 1 1 1 1 10890 14768 1416 14213 34396 39947 39947 1 MVVPVAALFTPLK Unmodified 1384.8152 0.81522969 880 E9Q1S3;Q01405 Sec23a Protein transport protein Sec23A yes no 0 0 0 0 7 6 1 1 94.609 94.609 3 6.7336E-06 33209 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.46 63.459 14.99 26.653 0 9.4841 57.463 19.719 14 26 0 9 56 19 1 2 0 1 3 1 7115.9 14769 880 14214 34397;34398 39948;39949;39950 39949 3 MVVSDFQVFVR Unmodified 1325.6802 0.68019277 725 E9Q3B9;D3YYS6;O35678;Q3UFN1 Mgll Monoglyceride lipase yes no 0 0 0 0 9 0 1 79.024 79.024 2 0.0051825 26906 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.595 47.353 49.129 0 38.541 27.957 18.59 0 46 0 37 28 19 0 1 0 1 1 1 0 3427.5 14770 725 14215 34399 39951 39951 1 MVYVPNWFSVDLK Unmodified 1596.801 0.80103619 2394 Q8BH57 Wdr48 WD repeat-containing protein 48 yes yes 0 0 0 0 11 0 1 92.935 92.935 3 0.0024044 29928 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.951 36.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14771 2394 14216 34400 39952 39952 1 MWAAVFGGGVK Unmodified 1121.5692 0.56918576 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 1 0 2 81.108 81.108 2;3 0.0042108 28222 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 56.013 39.296 29.856 37.355 20.558 0 86.905 27.935 28 37 19 0 84 28 1 1 1 0 2 1 8601.6 14772 570 14217 34401;34402 39953;39954 39953 2 MWEVLESTTQTK Unmodified 1451.6966 0.6966307 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 2.1 1 2 1 1 75.943 75.943 2;3 6.1319E-13 26146 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.01 100.24 139.95 52.919 270.08 178.28 160.97 260.84 131 56 260 176 167 249 4 2 4 3 3 4 32227 14773 2148 14218 34403;34404;34405;34406;34407 39955;39956;39957;39958;39959;39960 39958 6 MWEVQTGYCVK Unmodified 1399.6264 0.62644264 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 8 0 1 66.578 66.578 3 0.056531 21722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.679 15.726 0 0 0 0 84.851 57.275 0 0 0 0 83 56 0 0 0 0 1 1 4077.5 14774 1760 14219 34408 39961 39961 1 MWVTFLEGSSALNALSLNGK Deamidation (N) 2138.0718 0.07179132 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 1 0 0 10 0 1 103.78 103.78 3 2.8612E-06 33392 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.87 53.162 0 0 9.738 0 9 9.594 0 0 9 0 9 9 0 0 1 0 1 1 2541 14775 927 14220 34409 39962;39963 39963 250 2 MWVTFLEGSSALNALSLNGK Unmodified 2137.0878 0.087775735 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 11.5 0.5 1 1 102.79 102.79 4 1.0095E-07 28777 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.737 53.795 50.158 35.724 15.662 0 0 0 47 37 15 0 0 0 2 2 1 0 0 0 2778 14776 927 14220 34410;34411 39964;39965 39965 2 MYDLVAGSQCLK Unmodified 1383.6527 0.65265739 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9 0 1 68.763 68.763 2 7.2488E-07 22063 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.096 55.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14777 2179 14221 34412 39966 39966 1 MYESFIESLPFLK Unmodified 1602.8004 0.80036749 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 10 1.87 1 1 1 1 99.012 99.012 3 6.1955E-05 39893 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.094 55.069 30.044 29.792 0 90.719 0 29.848 28 28 0 83 0 28 1 1 0 2 0 1 5984.6 14778 1495 14222 34413;34414;34415;34416 39967;39968;39969;39970 39970 4 MYGADLAPVDFLHASEDAR Unmodified 2076.9575 0.95748984 3035 Q9D154;Z4YK03 Serpinb1a Leukocyte elastase inhibitor A yes no 0 0 0 0 5 0 1 76.154 76.154 3 8.6078E-07 28287 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.43 41.283 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14779 3035 14223 34417 39971 39971 1 MYGVLPWNAFPGK Oxidation (M) 1494.733 0.73295662 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 1 0 9.64 4.14 2 1 3 4 1 81.312 81.312 2;3 4.3274E-05 24450 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.74 94.646 665.13 478.29 622.62 555.43 861.37 810.72 624 482 616 544 854 778 12 9 11 9 9 12 172070 14780 1666 14224 34418;34419;34420;34421;34422;34423;34424;34425;34426;34427;34428 39972;39973;39974;39975;39976;39977;39978;39979;39980;39981;39982;39983;39984;39985;39986;39987;39988;39989 39979 115 18 MYGVLPWNAFPGK Unmodified 1478.738 0.738042 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 8.79 4.96 4 3 5 2 85.974 85.974 2;3;4 1.2694E-50 23987 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 206.78 160.79 2987.2 2829.9 3212.9 2361.3 6542.1 5811.9 2812 2872 3194 2439 6515 5611 12 15 16 14 15 18 1756500 14781 1666 14224 34429;34430;34431;34432;34433;34434;34435;34436;34437;34438;34439;34440;34441;34442 39990;39991;39992;39993;39994;39995;39996;39997;39998;39999;40000;40001;40002;40003;40004;40005;40006;40007;40008;40009;40010;40011;40012;40013;40014;40015;40016 40008 27 MYGVLPWNAFPGK Deamidation (N) 1479.7221 0.72205759 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 1 0 0 11.1 1.36 1 2 2 1 2 87.849 87.849 2;3 2.1265E-12 27889 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.96 104.84 168.75 198.81 189.14 91.572 243.3 181.78 158 193 186 90 241 176 4 6 5 4 4 3 40586 14782 1666 14224 34443;34444;34445;34446;34447;34448;34449;34450 40017;40018;40019;40020;40021;40022;40023;40024;40025;40026;40027;40028 40023 638 12 MYKEEGLNAFYK Unmodified 1491.7068 0.70680145 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 1 10 2.16 1 1 1 63.062 63.062 3 7.1169E-05 20405 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.906 71.033 588.26 335.9 574.28 215.55 0 214.27 553 362 561 213 0 201 3 3 3 2 0 1 48893 14783 2715 14225 34451;34452;34453 40029;40030;40031 40029 3 MYLFYGNK Unmodified 1034.4895 0.48953845 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 8.67 5.44 1 1 1 69.643 69.643 2 0.001261 23878 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.97 24.753 192.81 395.11 557.89 193.11 507.73 521.5 181 387 540 188 511 500 4 4 4 4 5 3 81808 14784 1400 14226 34454;34455;34456 40032;40033;40034;40035;40036 40034 5 MYPESTTGSPAR Acetyl (Protein N-term) 1337.5922 0.59216562 802 Q3UPV6;E0CXZ9;P62482;E0CXI4;E0CYS2 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 1 0 0 0 2 0 1 47.943 47.943 2 0.0012126 15167 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.893 41.639 29.979 12.875 0 25.139 0 14.924 28 14 0 23 0 14 1 1 0 1 0 1 4732.3 14785 802 14227 34457 40037 40037 1 MYSYVTEELPQLINANFPVDPQR Unmodified 2723.3265 0.32650246 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43 Esd S-formylglutathione hydrolase yes no 0 0 0 0 9 2.1 1 2 1 1 97.089 97.089 3;4 1.4755E-18 34893 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.33 89.886 50.273 8.9794 39.447 9.837 43.79 43.591 47 9 37 9 42 41 4 1 3 1 2 4 11474 14786 1122 14228 34458;34459;34460;34461;34462 40038;40039;40040;40041;40042;40043 40040 6 NAADLYFSLLQGFINSVGDSTQESK Unmodified 2703.3028 0.30279013 2600 Q8K2Q7;A0A0A6YWK4 Brox BRO1 domain-containing protein BROX yes no 0 0 0 0 11 0 1 114.75 114.75 4 0.0018974 36546 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.006 29.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1101.7 14787 2600 14229 34463 40044 40044 1 NAALDVEPIHAFR Unmodified 1451.7521 0.75211216 1655 P58404 Strn4 Striatin-4 yes yes 0 0 0 0 5 0 1 57.992 57.992 3 0.0048845 19758 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.155 25.363 9.4191 0 39.987 0 38.702 0 9 0 37 0 37 0 1 0 1 0 1 0 2397.4 14788 1655 14230 34464 40045 40045 1 NAANASASK Unmodified 832.40389 0.40389457 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6 0 1 28.348 28.348 2 0.042265 5289 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.59 25.369 0 0 0 0 18.501 39.98 0 0 0 0 19 38 0 0 0 0 1 1 522.67 14789 1382 14231 34465 40046 40046 1 NAAQFLLSTNDK Unmodified 1320.6674 0.66737948 2211 Q6P1F6;Q9CWU3 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 0 9 0.816 1 1 1 66.004 66.004 2;3 1.553E-11 21490 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.76 63.201 108.71 129.45 92.111 135.09 80.336 58.459 102 130 92 130 83 56 2 3 2 3 2 1 15911 14790 2211 14232 34466;34467;34468 40047;40048;40049 40047 3 NAATVDELK Unmodified 959.49238 0.49237523 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 4.5 0.5 1 1 48.919 48.919 2;3 0.00025218 15441 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.88 33.353 138.52 36.452 132.31 122.59 94.247 0 130 37 130 121 93 0 2 1 2 2 1 0 9013.1 14791 2691;1024 14233 34469;34470 40050;40051 40051 2 NACGSDYDFDVFVVR Unmodified 1762.7621 0.7620845 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 8 3.56 1 1 1 75.063 75.063 2 1.6332E-05 27804 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.17 87.429 9.657 20.216 0 50.313 56.265 0 9 19 0 47 56 0 1 1 0 2 2 0 8016.3 14792 680 14234 34471;34472;34473 40052;40053;40054 40052 3 NADELVK Unmodified 787.40758 0.40758296 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 4 0 1 46.484 46.484 2 0.022837 14582 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.74 5.4397 0 115.87 133.71 0 0 0 0 111 130 0 0 0 0 1 1 0 0 0 9424.5 14793 1356 14235 34474 40055 40055 1 NADMSEDMQQDAVDCATQAMEK Unmodified 2486.9658 0.96582398 3031 Q9D0M5;D6RIN4 Dynll2 Dynein light chain 2, cytoplasmic yes no 0 0 0 0 3 0 2 71.225 71.225 3;4 6.3234E-15 26436 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.696 74.25 59.691 56.015 36.365 57.639 74.503 37.843 56 57 37 56 75 37 1 2 1 2 2 1 12004 14794 3031 14236 34475;34476 40056;40057 40057 2 NADMSEEMQQDSVECATQALEK Unmodified 2513.0356 0.035618102 1776 P63168 Dynll1 Dynein light chain 1, cytoplasmic yes yes 0 0 0 0 2.5 0.5 1 1 70.621 70.621 3;4 5.6481E-12 26108 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.797 62.342 39.344 26.511 37.594 38.9 26.136 69.61 37 28 38 37 28 66 2 2 2 1 1 2 9774.1 14795 1776 14237 34477;34478 40058;40059 40059 2 NADPILISLK Unmodified 1082.6336 0.63356015 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 9.33 2.62 1 1 1 71.325 71.325 2;3 0.00017263 24623 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.174 54.455 108.36 99.578 175.46 189.65 169.77 163.54 102 102 176 186 176 157 2 2 3 3 3 2 23082 14796 3336 14238 34479;34480;34481 40060;40061;40062 40060 3 NADVELQQR Unmodified 1071.5309 0.530886 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 5.5 4.39 1 1 1 1 37.618 37.618 2;3 7.4698E-35 10945 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 204.42 61.317 246.74 248.02 86.043 258.26 369.59 338.72 231 240 83 245 371 324 3 2 1 3 3 3 145930 14797 1400;1401 14239 34482;34483;34484;34485 40063;40064;40065;40066 40064 4 NADYVQEVK Unmodified 1064.5138 0.51383895 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 7.33 4.03 1 1 1 48.423 48.423 2 0.001007 15282 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.55 72.117 0 68.216 56.487 27.496 258.96 37.306 0 65 56 28 250 37 0 3 2 1 3 1 20924 14798 2300 14240 34486;34487;34488 40067;40068;40069 40068 3 NAEFDRHEIQIYEEVAK Unmodified 2090.0069 0.006882877 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 1 4 0 1 61.178 61.178 4 4.0873E-06 21414 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.248 49.56 49.176 36.052 0 39.595 44.987 38.158 46 37 0 37 46 37 1 1 0 1 1 1 3318.2 14799 3241 14241 34489 40070 40070 1 NAEFDRHELLIYEEVAR Unmodified 2103.0385 0.038517356 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 1 4 0 1 62.781 62.781 4 0.00040029 22293 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.255 35.117 0 39.368 0 40.441 0 78.884 0 37 0 37 0 74 0 1 0 1 0 1 4969 14800 3341 14242 34490 40071 40071 1 NAEGSTVTCTGSIR Unmodified 1451.6675 0.66745583 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 4 0 1 37.294 37.294 2 0.026691 10290 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.991 16.918 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1708.8 14801 107 14243 34491 40072 40072 1 NAELEQQLR Unmodified 1099.5622 0.56218613 2830 Q99JP6;J3QQ00 Homer3 Homer protein homolog 3 yes no 0 0 0 0 4 0 1 44.225 44.225 2 0.010898 13466 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.267 6.2508 29.856 37.355 0 38.842 85.034 0 28 37 0 37 83 0 1 1 0 1 1 0 2861.3 14802 2830 14244 34492 40073 40073 1 NAENAIEALK Unmodified 1071.556 0.55603811 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 5 0 1 60.253 60.253 2 0.0053682 20893 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.721 27.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14803 1242 14245 34493 40074 40074 1 NAEPLINLDVNNPDFK Unmodified 1811.9054 0.90537792 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 5.5 0.5 1 1 75.064 75.064 3 3.8186E-05 27768 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.211 63.884 20.076 57.114 66.802 0 27.961 78.086 19 56 65 0 28 74 1 2 2 0 1 2 7226 14804 2924 14246 34494;34495 40075;40076 40075 2 NAESNAELK Unmodified 974.46689 0.46688876 2270 Q6ZWZ7;Q9CPR4 Rpl17 60S ribosomal protein L17 yes no 0 0 0 0 4 0 1 38.362 38.362 3 0.00093015 10758 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.807 39.792 39.701 0 0 49.042 65.737 0 37 0 0 46 65 0 1 0 0 1 1 0 3447.2 14805 2270 14247 34496 40077 40077 1 NAFACFDEEATGTIQEDYLR Unmodified 2349.0219 0.021940594 1923 Q3THE2 Myl12b Myosin regulatory light chain 12B yes yes 0 0 0 0 8.5 4.5 1 1 79.879 79.879 3 0.00011097 30697 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.451 36.685 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 2644.9 14806 1923 14248 34497;34498 40078;40079 40079 2 NAFGSTHAEALLK Unmodified 1357.699 0.69901396 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 7 0 1 53.972 53.972 3 0.00067034 16331 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.043 41.807 0 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 3501 14807 3165 14249 34499 40080 40080 1 NAFSLLGK Unmodified 848.4756 0.47560295 570;1041 B0V2P5;Q8BPN8;F6RYL8;F8WGX5;Q6PNC0 Dmxl2;Dmxl1 DmX-like protein 2;DmX-like protein 1 no no 0 0 0 0 12 0.816 1 1 1 68.744 68.744 2;3 0.0061582 19521 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.501 22.707 320.89 264.87 301.17 423.11 264.2 303.73 301 260 290 401 270 292 2 3 2 3 2 2 26841 14808 570;1041 14250 34500;34501;34502 40081;40082;40083;40084 40081 4 NAFVFLQYDK Unmodified 1243.6237 0.62372375 2345 Q80ZF8 Bai3 Brain-specific angiogenesis inhibitor 3 yes yes 0 0 0 0 1 0 1 89.399 89.399 3 0.065329 31856 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 36.525 11.733 29.952 18.196 0 29.902 37.328 0 28 19 0 28 37 0 1 1 0 1 1 0 10710 14809 2345 14251 34503 40085 40085 1 NAFVTGIAR Unmodified 947.51886 0.51886475 2057;2282 Q7TMB8;A0A0R4J119;G3UZI5;Q5SQX6 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 9 0 1 51.517 51.517 2 0.001476 13862 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.65 68.384 0 106.24 136.69 164.55 0 159.9 0 102 139 158 0 150 0 1 1 1 0 1 21533 14810 2282;2057 14252 34504 40086 40086 1 NAGAVIGK Unmodified 728.41809 0.41808807 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23;H3BJ43 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 8 0 1 44.558 44.558 2 0.017306 11465 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.229 31.725 68.579 102.07 168.49 128.71 177.34 73.823 65 102 167 130 176 74 1 1 2 2 1 1 34079 14811 613 14253 34505 40087;40088 40088 2 NAGPQIDR Unmodified 869.43553 0.43552905 1028 F8VPN4;A0A0G2JGI9;F6XXE6 Agl yes no 0 0 0 0 4 0 1 31.309 31.309 2 0.035267 7448 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.628 37.673 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 3906.8 14812 1028 14254 34506 40089 40089 1 NAGQTCVCSNR Unmodified 1265.5241 0.52410283 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 26.171 26.171 2;3 9.1739E-09 4744 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.62 99.991 44.83 18.196 33.932 34.627 0 24.518 42 19 32 33 0 23 2 1 2 2 0 1 6330.3 14813 2469 14255 34507;34508;34509;34510 40090;40091;40092;40093 40091 4 NAGQTVTIIAQYKPEEYSR Unmodified 2167.0909 0.090946857 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 1 6.5 0.5 1 1 61.91 61.91 3;4 3.9012E-08 20143 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.752 44.723 44.563 80.216 49.969 56.965 86.441 87.077 42 79 51 56 88 84 1 2 1 1 2 2 8969.3 14814 407 14256 34511;34512 40094;40095 40095 2 NAGTYDAK Unmodified 838.3821 0.38209649 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 6 0 1 35.636 35.636 2 0.0068672 8619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.087 56.263 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14815 2963 14257 34513 40096 40096 1 NAGVEGSLIVEK Unmodified 1214.6507 0.65066678 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 7.33 4.11 1 1 1 1 1 1 58.162 58.162 2;3 1.9238E-14 13373 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 136.38 83.049 326.01 189.99 230.26 0 338.75 469.36 306 194 222 0 334 449 5 4 3 0 4 7 42519 14816 1766 14258 34514;34515;34516;34517;34518;34519 40097;40098;40099;40100;40101;40102;40103;40104;40105 40103 9 NAGVEGSLIVEK Deamidation (N) 1215.6347 0.63468237 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 0 5 0 1 64.149 64.149 3 0.0011867 22484 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.997 40.899 0 14.672 13.378 19.97 0 14.924 0 14 14 19 0 14 0 1 1 1 0 1 6981.7 14817 1766 14258 34520 40106 40106 698 1 NAHLVSLR Unmodified 908.5192 0.5191991 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 7.5 0.5 1 1 37.342 37.342 3 0.0055794 7929 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.248 36.228 20.207 48.507 56.323 28.204 91.292 106.13 19 46 56 28 92 102 1 1 2 1 2 2 11043 14818 628 14259 34521;34522 40107;40108 40108 2 NAIDDGCVVPGAGAVEVALAEALIK Unmodified 2451.2679 0.26792495 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 7.4 2.87 1 2 1 1 102.8 102.8 3;4 5.576E-20 37576 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.763 65.641 24.581 40.1 29.599 38.071 26.32 64.806 23 39 30 36 27 62 3 6 5 5 3 7 13920 14819 1826 14260 34523;34524;34525;34526;34527 40109;40110;40111;40112;40113;40114;40115;40116;40117;40118 40112 10 NALANPLYCPDYR Unmodified 1565.7297 0.72966216 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 61.37 61.37 2;3 7.6543E-33 19950 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 182.93 152.54 88.418 93.81 150.03 96.189 99.296 146.41 83 93 148 93 102 140 2 2 2 1 2 3 44411 14820 3117 14261 34528;34529;34530 40119;40120;40121 40120 3 NALSSLWGK Unmodified 974.51853 0.5185304 1667 P60229 Eif3e Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 0 11 0 1 69.743 69.743 2 0.00083195 19967 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.143 51.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14821 1667 14262 34531 40122 40122 1 NALVSHLDGTTPVCEDIGR Deamidation (N) 2053.9739 0.97386819 2998 Q9CZ13;A0A0A6YWX6 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 0 3.5 0.5 1 1 62.327 62.327 3 4.4279E-05 22111 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.392 49.488 50.431 0 0 20.767 19.874 20.254 47 0 0 19 19 19 2 0 0 1 1 1 5871.2 14822 2998 14263 34532;34533 40123;40124 40124 1042 2 NALVSHLDGTTPVCEDIGR Unmodified 2052.9899 0.9898526 2998 Q9CZ13;A0A0A6YWX6 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 58.199 58.199 3 2.919E-11 19972 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.967 78.473 206.84 85.011 150.22 84.655 0 108.73 194 93 148 84 0 102 3 2 3 2 0 1 63514 14823 2998 14263 34534;34535;34536;34537 40125;40126;40127;40128 40128 4 NANGFPYREEEEGAFGEHR Deamidation (N) 2208.9461 0.94607353 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 1 0 1 3 0 2 49.755 49.755 4 1.9164E-26 16419 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 139.17 110.22 48.968 54.875 84.151 47.498 92.148 85.849 46 56 83 46 93 83 1 2 2 1 2 2 18005 14824 1424 14264 34538;34539 40129;40130;40131 40130 524 3 NAPAIIFIDELDAIAPK Unmodified 1809.9877 0.98765098 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 9.18 3.07 1 2 1 2 1 4 100.09 100.09 2;3;4 1.4112E-13 40439 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.401 83.187 88.42 139.98 112.01 145.2 151.84 110.54 83 138 107 136 149 105 5 8 6 6 6 5 77828 14825 1875 14265 34540;34541;34542;34543;34544;34545;34546;34547;34548;34549;34550 40132;40133;40134;40135;40136;40137;40138;40139;40140;40141;40142;40143;40144;40145 40144 14 NAPPSFAVAVTHEAISQLLQTDLSEFK Unmodified 2912.492 0.49198788 2535 Q8CGA0 Ppm1f Protein phosphatase 1F yes yes 0 0 0 0 9.5 0.5 1 1 100.48 100.48 4 4.6969E-05 32659 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.743 31.804 36.414 13.526 0 0 0 7.462 34 14 0 0 0 7 2 1 0 0 0 1 4078.3 14826 2535 14266 34551;34552 40146;40147 40147 2 NAPTPQEFK Unmodified 1030.5084 0.50835964 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 7.75 3.11 1 1 1 1 48.678 48.678 2;3 0.00079808 15386 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.82 58.647 443.59 196.48 300.42 410.6 392.01 472.78 416 203 297 398 399 454 5 3 3 4 4 5 40631 14827 71;74;949;1367 14267 34553;34554;34555;34556 40148;40149;40150;40151;40152 40152 5 NAPTPQEFKEGEDAVIVCDVVSSLPPTIIWK Unmodified 3438.7381 0.73810817 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 8 0.816 1 1 1 97.439 97.439 4;5 4.8316E-09 35772 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.65 50.428 24.636 8.566 0 29.342 8.9699 29.848 23 9 0 27 9 28 2 1 0 2 1 2 5875.5 14828 71;74;949;1367 14268 34557;34558;34559 40153;40154;40155;40156 40153 4 NAQESANPEDEVDEFLGR Unmodified 2018.8817 0.88174194 1839 P84309 Adcy5 Adenylate cyclase type 5 yes yes 0 0 0 0 2 0 1 72.105 72.105 3 0.011061 26120 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 37.999 29.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1759.9 14829 1839 14269 34560 40157 40157 1 NAQLNIEQDVAPH Unmodified 1447.7056 0.7055559 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 4 0 1 55.755 55.755 3 0.014315 19048 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.789 20.211 39.36 36.269 26.629 29.017 0 29.848 37 37 28 28 0 28 1 1 1 1 0 1 2874.2 14830 2848 14270 34561 40158 40158 1 NAQNINPSSSQNSQNFATYK Unmodified 2212.0145 0.01448745 1104 G5E8H1 Gria2 no no 0 0 0 0 7 0 1 51.941 51.941 4 0.044165 15469 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 29.126 10.988 69.399 0 58.157 46.812 0 0 65 0 56 46 0 0 1 0 1 1 0 0 2616.2 14831 1104 14271 34562 40159 40159 1 NAQVAQSPVLLLGGAASTLLQK Unmodified 2178.2372 0.23721716 322 A0A1W2P8D6;A0A1W2P727;A0A1W2P8E1;Q8BU33 Ilvbl Acetolactate synthase-like protein yes no 0 0 0 0 11 0 1 92.374 92.374 3 3.8435E-06 29678 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.754 47.363 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 1939.1 14832 322 14272 34563 40160 40160 1 NASCYFDIEWCDRR Unmodified 1890.7778 0.77775134 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 1 13 0 1 62.556 62.556 3 0.057907 22414 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.776 33.871 88.193 71.367 85.079 0 74.768 76.75 83 74 83 0 74 74 1 1 1 0 1 1 6005.5 14833 2131 14273 34564 40161 40161 1 NASDLFPAVVK Unmodified 1159.6237 0.62372375 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 8 0 1 69.878 69.878 3 0.00096943 23238 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.153 42.771 39.468 46.283 0 79.716 62.009 67.521 37 46 0 74 65 65 1 1 0 1 1 1 6321.8 14834 3249 14274 34565 40162 40162 1 NASDMIDK Unmodified 892.39603 0.396032 484;2493 A2AKU9;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 5 0 1 47.845 47.845 2 0.0038668 14968 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.99 56.724 138.16 87.146 148.91 118.92 178.63 0 130 93 148 120 176 0 1 1 1 1 1 0 9397.8 14835 484;2493 14275 34566 40163 40163 1 NASHEQAAIALK Unmodified 1251.6571 0.65714914 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 6.5 0.5 1 1 41.783 41.783 3 3.2416E-12 11526 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.39 90.43 157.1 144.12 165 140.34 92.962 59.696 148 148 167 139 93 56 2 2 2 2 1 1 19148 14836 407 14276 34567;34568 40164;40165 40164 2 NASNDIVR Unmodified 887.44609 0.44609374 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 4 0 1 32.213 32.213 2 0.010964 7837 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.358 44.392 0 33.412 38.029 0 0 34.112 0 32 37 0 0 32 0 1 1 0 0 1 6010.5 14837 1943 14277 34569 40166 40166 1 NASTFEEVVQVPSAYQK Unmodified 1895.9265 0.92650729 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 8.67 3.3 1 1 1 69.54 69.54 3;4 2.2105E-19 25321 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.392 75.105 69.232 19 86.134 74.59 61.585 86.721 65 19 83 74 65 83 1 1 1 1 1 1 7199.6 14838 2075 14278 34570;34571;34572 40167;40168;40169 40167 3 NATHEQAAAALK Unmodified 1223.6258 0.62584901 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 0 13 0 1 34.829 34.829 3 0.0061768 8964 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.275 30.134 68.937 63.135 82.371 74.073 101.01 66.408 65 65 83 74 102 65 1 1 1 1 1 1 3384.1 14839 538 14279 34573 40170 40170 1 NATKPSPASK Unmodified 999.53491 0.53490874 2450 Q925N0;Q8BRQ9 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 1 9 0 1 34.067 34.067 3 0.018281 6342 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.164 36.734 127.51 88.101 134.73 0 106.69 0 120 93 130 0 102 0 1 1 1 0 1 0 5419.9 14840 2450 14280 34574 40171 40171 1 NATMLYTASQAFLR Unmodified 1585.7923 0.79226242 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 10.5 0.5 1 1 77.528 77.528 2 0.0048237 23333 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.11 40.807 20.387 28 0 0 28.987 8.7668 19 28 0 0 28 9 1 1 0 0 1 1 7722.9 14841 799 14281 34575;34576 40172;40173 40173 2 NATNEQDLANR Unmodified 1244.5745 0.57454173 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 4.4 4.36 1 1 2 1 32.007 32.007 2;3 5.0646E-13 8313 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 148.19 101.38 89.154 103.25 76.814 57.292 84.186 0 84 102 74 56 83 0 3 2 2 2 2 0 20816 14842 799 14282 34577;34578;34579;34580;34581 40174;40175;40176;40177;40178 40176 5 NATNEQDLANR Deamidation (N) 1245.5586 0.55855731 799 E0CXB9;Q61301;Q8BS72 Ctnna2 Catenin alpha-2 yes no 0 1 0 0 2 0 1 32.084 32.084 3 0.0017341 8040 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.663 39.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14843 799 14282 34582 40179 40179 210 1 NATNVEQAFMTMAAEIK Unmodified 1867.8808 0.88081943 3040 Q9D1G1 Rab1b Ras-related protein Rab-1B yes yes 0 0 0 0 6.5 0.5 1 1 92.778 92.778 3 9.0084E-05 35090 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.454 46.754 28 0 19 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 3933.6 14844 3040 14283 34583;34584 40180;40181 40180 2 NATNVEQSFMTMAAEIK Unmodified 1883.8757 0.87573405 1742;2065 P62821;Q5SW88;Q5SW87;Q5SW86 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 0 6.33 0.943 1 2 86.231 86.231 3;4 0.0002536 31640 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.504 18.328 29.927 0 19.583 50.204 28.291 49.295 28 0 19 47 28 47 2 0 1 2 1 2 5450.5 14845 1742;2065 14284 34585;34586;34587 40182;40183;40184 40184 3 NATSDDIK Unmodified 862.40323 0.40322587 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 0 4.33 0.471 2 1 37.607 37.607 2;3 0.0045943 10387 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.221 17.016 118.02 78.431 203.24 98.356 109.27 145.06 111 83 194 102 112 139 2 2 2 2 2 2 12810 14846 1682 14285 34588;34589;34590 40185;40186;40187 40186 3 NATSDDIKK Unmodified 990.49819 0.49818889 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 1 8 3.56 1 1 1 37.452 37.452 3 0.003845 10141 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.488 37.721 969.78 872.93 198.35 984.37 963.06 1037.5 909 885 213 928 998 999 3 3 1 3 3 3 122430 14847 1682 14286 34591;34592;34593 40188;40189;40190 40188 3 NATSVAGR Unmodified 774.39842 0.39841526 2823 Q925I1;H3BK90 Atad3;Atad3a ATPase family AAA domain-containing protein 3 yes no 0 0 0 0 5 0 1 25.532 25.532 2 0.034814 4485 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.812 21.056 24.56 7.6943 13.497 23.915 22.286 19.618 23 9 14 23 23 19 1 1 1 1 1 1 1445 14848 2823 14287 34594 40191 40191 1 NATTDALTSVLTK Unmodified 1333.7089 0.70890994 3450;8 A0A087WNU5;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5;S4R208;S4R278 Ank3 Ankyrin-3 no no 0 0 0 0 8 0 1 70.481 70.481 3 0.0028317 23549 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.09 31.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14849 8;3450 14288 34595 40192 40192 1 NAVDAFR Unmodified 791.3926 0.3926016 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 7 0 1 43.374 43.374 2 0.033716 11457 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.313 49.46 167.81 133.62 177.15 171.97 0 178.02 158 139 179 167 0 167 1 1 1 1 0 1 10815 14850 1836 14289 34596 40193 40193 1 NAVEECVYEFR Unmodified 1414.6187 0.61871473 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 6.67 4.5 1 1 1 58.886 58.886 2 8.3177E-14 20578 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.97 129.18 78.497 101.07 129.51 105.2 74.25 77.601 74 102 130 102 74 74 2 3 3 2 2 2 21867 14851 2137 14290 34597;34598;34599 40194;40195;40196 40195 3 NAVEEYVYDFR Unmodified 1403.6357 0.635745 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 7.33 4.03 1 1 1 69.712 69.712 2;3 6.0197E-06 25582 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.266 60.57 59.88 18.196 19.583 50.204 0 20.254 56 19 19 47 0 19 3 1 1 2 0 1 11443 14852 1581 14291 34600;34601;34602 40197;40198;40199;40200 40200 4 NAVEEYVYEMR Unmodified 1401.6235 0.62346575 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 3 0 1 65.593 65.593 3 0.0003451 23806 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.479 62.721 9.657 0 0 0 18.517 9.0656 9 0 0 0 18 9 1 0 0 0 1 1 2306.4 14853 1957 14292 34603 40201 40201 1 NAVEEYVYEMR Deamidation (N) 1402.6075 0.60748134 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 1 0 0 3 0 1 68.464 68.464 3 0.038891 25164 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.062 36.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14854 1957 14292 34604 40202 40202 785 1 NAVESYTYNIK Unmodified 1300.6299 0.62993134 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 10 3 1 1 56.586 56.586 3 1.1003E-08 19339 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.96 94.445 39.366 203.21 96.576 185.42 63.245 196.47 37 195 102 176 65 186 1 2 1 2 1 2 15981 14855 1397 14293 34605;34606 40203;40204 40204 2 NAVITVPAYFNDSQR Unmodified 1693.8424 0.84238373 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 67.608 67.608 3 5.0904E-17 22165 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.74 111.6 48.805 93.056 172.28 57.925 45.781 196.97 46 92 167 56 46 186 1 2 3 1 1 3 28293 14856 1533 14294 34607;34608;34609;34610 40205;40206;40207;40208 40206 4 NAVIVAK Unmodified 713.44357 0.44357454 2671;584 Q8R574;B1AT82;Q9D0M1;B1AT84 Prpsap2;Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 2;Phosphoribosyl pyrophosphate synthase-associated protein 1 no no 0 0 0 0 9 0 1 46.828 46.828 2 0.058024 11605 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.415 16.604 78.73 42.346 77.13 0 0 127.92 74 46 74 0 0 120 1 1 1 0 0 1 6845.8 14857 2671;584 14295 34611 40209 40209 1 NAVIVALSSK Unmodified 1000.5917 0.59169534 1687 P61087;A0A0J9YUI1;A0A0J9YU07;Q3V3R8 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 11.5 0.5 1 1 65.364 65.364 2;3 3.4912E-05 16050 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.9 94.645 79.182 73.397 0 89.901 43.507 68.049 74 74 0 83 46 65 1 2 0 2 1 1 28200 14858 1687 14296 34612;34613 40210;40211 40211 2 NAVLFEAISLIIHHDSEPNLLVR Unmodified 2599.4122 0.41222142 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 10 0.816 1 1 1 96.029 96.029 4 5.5438E-13 34397 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.987 69.733 15.954 16.855 68.963 47.811 17.054 40.29 15 17 66 46 18 38 2 2 4 2 2 1 11135 14859 1401 14297 34614;34615;34616 40212;40213;40214;40215;40216;40217 40212 6 NAVNLAVLK Unmodified 940.57057 0.57056597 1104;565 B0QZW1;F2Z488;G5E8H1 Gria3;Gria2 no no 0 0 0 0 8 0 1 62.786 62.786 2 0.021539 19863 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.673 28.573 88.74 63.176 0 0 74.438 86.354 83 65 0 0 74 83 1 1 0 0 1 1 1834.8 14860 565;1104 14298 34617 40218 40218 1 NAVSVHHALASK Unmodified 1232.6626 0.66256887 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 9 0 1 34.852 34.852 4 3.7409E-06 6750 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.22 72.919 0 223.54 248.43 0 0 0 0 214 242 0 0 0 0 1 1 0 0 0 10469 14861 814 14299 34618 40219 40219 1 NAVTQEFGPVPDTAR Unmodified 1600.7845 0.7845345 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6.17 3.24 1 1 1 2 1 55.85 55.85 2;3 1.152E-21 18171 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.13 110.31 324.93 287.55 419.8 283.4 290.55 348.86 306 297 417 279 296 334 6 7 6 3 5 6 212150 14862 2843 14300 34619;34620;34621;34622;34623;34624 40220;40221;40222;40223;40224;40225;40226;40227 40226 8 NAVTQEFGPVPDTAR Deamidation (N) 1601.7686 0.76855009 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 1 0 0 3.33 0.471 2 1 58.255 58.255 3 0.00080537 20750 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.913 55.204 20.387 48.901 66.224 26.312 57.036 19.731 19 47 65 28 56 19 1 2 2 2 2 1 22389 14863 2843 14300 34625;34626;34627 40228;40229;40230 40229 1010 3 NAVWALSNLCR Unmodified 1302.6503 0.65028963 2098;1189 Q60960;G3UXF0;Q4FJZ2;O35345 Kpna1;Kpna6 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed;Importin subunit alpha;Importin subunit alpha-7 no no 0 0 0 0 11.5 0.5 1 1 68.744 68.744 2 4.0441E-05 17365 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.92 69.05 39.701 98.952 0 63.65 102.63 33.059 37 93 0 60 102 32 1 1 0 2 2 1 18562 14864 2098;1189 14301 34628;34629 40231;40232 40232 2 NAYAVLYDIILK Unmodified 1394.781 0.78095267 1067 G3UXZ5;P97371;G3UXY0;G3X9K9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 11.3 1.25 1 1 1 95.278 95.278 2;3 1.123E-07 31160 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.66 69.378 40.679 18.848 0 9.1169 47.01 39.005 38 19 0 9 46 38 2 1 0 1 2 2 6950 14865 1067 14302 34630;34631;34632 40233;40234;40235 40233 3 NAYHAVYK Unmodified 964.47667 0.47666558 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 10.5 2.5 1 1 36.819 36.819 3 0.010617 7882 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.962 40.265 656.59 313.88 470.38 585.12 640.22 820.67 616 307 461 572 654 787 2 1 1 1 1 2 23315 14866 513 14303 34633;34634 40236;40237 40236 2 NAYTMVLHK Unmodified 1075.5485 0.54845032 3245 Q9JLV5;F6ZZK0 Cul3 Cullin-3 yes no 0 0 0 0 9 0 1 52.121 52.121 3 0.0043324 14163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.184 37.525 0 0 85.58 94.869 89.273 106.18 0 0 83 93 93 102 0 0 1 1 1 1 4421.1 14867 3245 14304 34635 40238 40238 1 NAYVWSQK Unmodified 994.48723 0.48723027 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 10 2.16 1 1 1 52.987 52.987 2 0.0013789 17522 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.23 80.068 344.57 362.66 211.13 230.08 205.13 463.19 324 366 218 223 208 440 3 3 2 2 2 3 53164 14868 3303 14305 34636;34637;34638 40239;40240;40241 40241 3 NCAAYLK Unmodified 838.40072 0.40072345 1974;1149;391 A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q3UH59;Q61879;Q5SV64;Q6URW6;K3W4R2;A0A140LI60 Myh11;Myh10;Myh14 Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 0 8 0 1 45.18 45.18 2 0.030721 11653 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.462 43.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14869 391;1974;1149 14306 34639 40242 40242 1 NCFASVFEK Unmodified 1100.4961 0.4960804 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 9.2 2.04 1 1 2 1 66.023 66.023 2;3 0.00010194 20739 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 132.91 84.119 286.39 155.17 455.54 319.57 440.92 531.08 269 158 436 324 453 510 3 3 3 4 5 5 64127 14870 2971 14307 34640;34641;34642;34643;34644 40243;40244;40245;40246;40247 40245 5 NCLLRPGSPAQVVQCISELGIFGVYVR Unmodified 3031.5736 0.57356622 1604 Q3UEE2;P51855;H3BKH4 Gss Glutathione synthetase yes no 0 0 0 1 12 0 1 96.132 96.132 4 0.04372 27556 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 28.434 18.451 9.5993 0 9.6896 0 0 0 9 0 9 0 0 0 1 0 1 0 0 0 555.22 14871 1604 14308 34645 40248 40248 1 NCNDFQYESK Deamidation (N) 1304.4979 0.49793089 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 1 0 0 3.5 0.5 1 1 48.085 48.085 2 0.0053457 15758 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.89 68.163 9.4997 37.469 75.261 56.365 18.989 0 9 37 74 56 19 0 1 2 2 2 1 0 4610.6 14872 1797 14309 34646;34647 40249;40250 40249 733 2 NCNDFQYESK Unmodified 1303.5139 0.5139153 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 7 3.54 1 1 1 1 46.311 46.311 2;3 1.4097E-08 14559 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.17 120.25 99.524 1416.9 1468 1514.7 1519.1 1578.8 93 1354 1489 1492 1564 1520 2 2 2 4 3 3 44006 14873 1797 14309 34648;34649;34650;34651 40251;40252;40253;40254 40251 4 NCPDQDLK Unmodified 988.42839 0.42839476 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 4.67 0.471 1 2 39.981 39.981 2;3 0.012098 11490 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.761 57.921 69.32 132.01 34.428 59.156 106.69 0 65 129 37 56 102 0 1 2 1 1 1 0 10196 14874 2301;365 14310 34652;34653;34654 40255;40256;40257 40255 3 NCSETQYESK Deamidation (N) 1245.4819 0.48194647 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 0 0 2 0 1 40.155 40.155 3 0.0044556 11915 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.488 45.052 29.466 36.271 66.436 35.233 66.372 0 28 37 65 37 65 0 1 1 1 1 1 0 9881.3 14875 1706 14311 34655 40258 40258 662 1 NCSETQYESK Unmodified 1244.4979 0.49793089 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 6 4.06 1 2 1 36.232 36.232 2;3 1.1854E-08 9374 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.21 111.66 438.44 369.82 252.35 396.25 379.39 300.75 411 373 255 382 386 291 2 3 1 3 3 2 208320 14876 1706 14311 34656;34657;34658;34659 40259;40260;40261;40262 40262 4 NCTIVSPDAGGAK Unmodified 1288.6082 0.60815004 1064;2505 G3UXL2;Q9D7G0;Q8C5R8 Prps1l3;Prps1;Prps1l1 Ribose-phosphate pyrophosphokinase 1 no no 0 0 0 0 5.5 0.5 1 1 46.81 46.81 3 5.069E-05 13796 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.464 70.08 128.91 0 155.02 100.36 100.24 175.16 121 0 148 102 102 167 2 0 2 2 1 2 19298 14877 1064;2505 14312 34660;34661 40263;40264 40264 2 NCTSDSVR Unmodified 937.39234 0.39234361 1509 P34152 Ptk2 Focal adhesion kinase 1 yes yes 0 0 0 0 3 0 1 22.566 22.566 2 0.045657 3990 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.404 23.295 20.262 7.9726 14.183 8.6253 19.478 0 19 9 14 9 19 0 1 1 1 1 1 0 1397 14878 1509 14313 34662 40265 40265 1 NCVILPHIGSATYK Unmodified 1571.813 0.81299786 2781 Q91Z53 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes yes 0 0 0 0 9 0 1 58.556 58.556 3 0.001269 17186 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.079 22.422 48.929 85.013 0 0 77.404 0 46 83 0 0 74 0 1 1 0 0 1 0 5201.9 14879 2781 14314 34663 40266 40266 1 NCWQNYLDFHR Deamidation (N) 1552.6517 0.65174619 1639 P56391 Cox6b1 Cytochrome c oxidase subunit 6B1 yes yes 0 1 0 0 7.75 3.11 1 1 1 1 66.527 66.527 3 0.0019213 22335 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.632 59.474 138.59 120.99 87.165 146.28 82.09 136.78 130 120 83 140 84 130 3 2 2 4 3 3 17612 14880 1639 14315 34664;34665;34666;34667 40267;40268;40269;40270 40269 625 4 NCWQNYLDFHR Unmodified 1551.6677 0.6677306 1639 P56391 Cox6b1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 62.747 62.747 2;3 1.1296E-23 22157 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.71 119.13 109.18 130.96 0 0 189.86 106.36 102 130 0 0 185 102 1 2 0 0 2 1 50550 14881 1639 14315 34668;34669;34670;34671 40271;40272;40273;40274 40274 4 NDANPETHAFVTSPEIVTALAIAGTLK Unmodified 2779.4392 0.43922403 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 8.1 1.92 2 2 3 2 1 91.942 91.942 3;4;5 9.1822E-26 33352 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.75 97.293 117.1 280.37 222.52 220.47 200.44 194.47 110 270 220 212 200 186 4 8 7 6 6 6 83964 14882 2843 14316 34672;34673;34674;34675;34676;34677;34678;34679;34680;34681 40275;40276;40277;40278;40279;40280;40281;40282;40283;40284;40285;40286;40287;40288 40283 14 NDANPETHAFVTSPEIVTALAIAGTLK Deamidation (N) 2780.4232 0.42323961 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 1 0 0 8 0 1 96.409 96.409 4 2.7206E-17 34725 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.429 48.277 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 934.49 14883 2843 14316 34682 40289 40289 1011 1 NDDIADGNPK Unmodified 1057.4676 0.46761704 3266 Q9QXS1;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221 Plec Plectin yes no 0 0 0 0 3 0 1 40.771 40.771 3 0.040816 12385 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.543 26.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14884 3266 14317 34683 40290 40290 1 NDDVDPVAASAEYELEK Unmodified 1863.8374 0.83741751 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4;H3BJA6 Ppp1r9a yes no 0 0 0 0 2 0 1 68.783 68.783 3 8.2846E-07 24920 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.794 62.395 30.044 0 0 20.767 0 29.848 28 0 0 19 0 28 1 0 0 1 0 1 4317.4 14885 1119 14318 34684 40291 40291 1 NDEAEYVCIAENK Unmodified 1553.6668 0.66678713 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 3 0 1 60.168 60.168 3 0.0081661 21376 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.351 34.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14886 71;74;949;1367 14319 34685 40292 40292 1 NDEEAVVDR Unmodified 1045.4676 0.46761704 602 B1AWV9;Q5DTL9 Slc4a10 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger yes no 0 0 0 0 13 0 1 34.982 34.982 2 0.0081053 8999 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.808 47.978 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14887 602 14320 34686 40293 40293 1 NDEELNK Unmodified 860.38758 0.3875758 1468;645 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4;Q6GSS7;A0A0N4SV66;Q8CGP4;Q8R1M2;Q64523;P27661;Q64522 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a;Hist2h2aa1;Hist1h2aa;H2afj;Hist2h2ac;H2afx;Hist2h2ab Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3;Histone H2A type 2-A;Histone H2A;Histone H2A.J;Histone H2A type 2-C;Histone H2AX;Histone H2A type 2-B no no 0 0 0 0 5.5 4.39 1 1 1 1 38.502 38.502 2 0.0061864 11390 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 143.89 47.696 2406.3 2407.4 3282.1 2985.3 4098 4485 2268 2455 3272 2975 4191 4317 4 4 4 4 4 5 760240 14888 645;1468 14321 34687;34688;34689;34690 40294;40295;40296;40297;40298 40296 5 NDEGIAYR Unmodified 936.43011 0.43010932 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 5.5 4.39 1 1 1 1 36.995 36.995 2 0.0010686 10435 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 146.03 90.427 972.02 763.66 874.83 855.9 652.08 546.93 914 778 882 842 663 529 4 3 4 5 3 2 389770 14889 2116 14322 34691;34692;34693;34694 40299;40300;40301;40302;40303 40299 5 NDESQLSPATR Unmodified 1216.5684 0.56839372 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 35.442 35.442 2 0.00024788 9873 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.229 61.509 20.207 29.173 67.22 28.245 8.1166 0 19 28 65 28 9 0 1 1 2 1 1 0 7671.7 14890 3266 14323 34695;34696 40304;40305 40305 2 NDEVSSLDAFLDLIR Unmodified 1705.8523 0.85227972 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 7.5 2.87 2 4 1 1 2 99.394 99.394 2;3 4.9391E-30 36989 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 155.22 122.59 143.57 104.33 99.096 60.97 117.08 76.182 135 108 96 58 116 73 6 8 5 4 6 4 105820 14891 502;1544 14324 34697;34698;34699;34700;34701;34702;34703;34704;34705;34706 40306;40307;40308;40309;40310;40311;40312;40313;40314;40315;40316;40317;40318;40319;40320;40321 40310 16 NDEVSSLDAFLDLIR Deamidation (N) 1706.8363 0.8362953 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 1 0 0 7 3.03 2 2 1 102.61 102.61 3 1.2232E-16 36062 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.01 80.819 4 9.4378 12.597 27.274 6.2089 6.2188 4 9 13 26 6 6 1 1 3 3 1 2 7948.4 14892 502;1544 14324 34707;34708;34709;34710;34711 40322;40323;40324;40325;40326;40327;40328 40322 128 7 NDFLIQMFHYIK Unmodified 1567.7857 0.78572048 2660 Q8R3P0;B0QZP3;V9GXG0 Aspa Aspartoacylase yes no 0 0 0 0 12 0 1 88.455 88.455 3 0.0023833 25149 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.314 24.876 0 0 0 0 27.631 48.248 0 0 0 0 28 46 0 0 0 0 1 1 1380.1 14893 2660 14325 34712 40329 40329 1 NDFMGAMSFGVSELLK Unmodified 1744.8164 0.81642826 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 11 2 1 1 96.098 96.098 3 0.00041213 38505 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.872 40.033 0 9.4227 9.1727 20.767 18.867 68.752 0 9 9 19 19 65 0 1 1 1 1 2 8245 14894 1783 14326 34713;34714 40330;40331 40331 2 NDFMGSLSFGISELQK Unmodified 1771.8451 0.84508585 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 8.5 0.5 1 1 87.544 87.544 3 1.9547E-05 30767 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.579 79.835 0 0 28.6 38.066 35.634 38.425 0 0 28 37 37 37 0 0 1 1 1 1 2342 14895 1796 14327 34715;34716 40332;40333 40333 2 NDFQLIGIQDGYLSLLQDSGEVR Unmodified 2579.2867 0.28674613 51 A0A0A0MQM0;P63242;J3QPS8 Eif5a Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 yes no 0 0 0 0 8.67 3.09 1 1 1 95.568 95.568 3 5.1457E-17 36103 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.16 89.901 6.438 0 9.0804 40.206 5.9799 14.924 6 0 9 39 6 14 1 0 1 3 1 1 16578 14896 51 14328 34717;34718;34719 40334;40335;40336 40334 3 NDFTEEEEAQVR Unmodified 1465.6321 0.63211618 3325 Q9WTX5 Skp1 S-phase kinase-associated protein 1 yes yes 0 0 0 0 13 0 1 46.492 46.492 2 7.0786E-32 14613 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 155.47 124.6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14897 3325 14329 34720 40337 40337 1 NDGALYHNNEEK Unmodified 1402.6113 0.61132116 1920 Q3UBW1;Q3TFQ1 Spryd7 SPRY domain-containing protein 7 yes no 0 0 0 0 3 0 1 36.528 36.528 3 0.0023864 10442 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.898 36.442 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14898 1920 14330 34721 40338 40338 1 NDGAVAGTR Unmodified 859.41479 0.41479361 761;3358 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2;Q9Z0H8 Clip1;Clip2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 no no 0 0 0 0 2 0 1 24.51 24.51 2 0.058318 4739 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 54.198 25.096 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2471.6 14899 761;3358 14331 34722 40339 40339 1 NDGGIYTCFAENNR Unmodified 1629.6842 0.68416853 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 5 0.816 1 1 1 54.659 54.659 2;3 2.4021E-05 18179 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.771 65.408 118.58 0 88.468 16.616 143.34 37.56 111 0 83 19 139 37 2 0 2 1 2 1 13539 14900 1362 14332 34723;34724;34725 40340;40341;40342 40341 3 NDGNCIHMVDNGIVEK Deamidation (N) 1814.7927 0.7927327 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 1 0 0 4 0 1 55.109 55.109 3 0.027068 18783 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.513 29.598 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 3050 14901 919;937 14333 34726 40343 40343 249 1 NDGVLLLQALTR Unmodified 1311.751 0.75104953 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 9 0 1 81.711 81.711 2 0.015832 28089 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.555 26.896 39.414 56.926 0 0 46.111 58.38 37 56 0 0 46 56 1 1 0 0 1 1 5362.6 14902 3387 14334 34727 40344 40344 1 NDIAWNFEK Unmodified 1135.5298 0.52982336 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 0 6 0 1 66.781 66.781 3 0.029527 23218 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.3 24.083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14903 54 14335 34728 40345 40345 1 NDIRPLSNSVPEDVGK Unmodified 1738.885 0.88497683 2690 Q8VD33;E0CX61;E0CZ99 Sgtb Small glutamine-rich tetratricopeptide repeat-containing protein beta yes no 0 0 0 1 5 0 1 53.507 53.507 3 0.0011134 17631 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.265 40.602 29.761 0 47.508 47.447 0 59.696 28 0 46 46 0 56 1 0 1 1 0 1 2655.5 14904 2690 14336 34729 40346 40346 1 NDIVNMLVGNK Unmodified 1215.6282 0.6281572 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 9.5 0.5 1 1 77.776 77.776 2;3 7.467E-09 23962 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.171 64.8 39.701 0 0 0 46.807 38.106 37 0 0 0 46 37 1 0 0 0 1 1 2339.2 14905 1518 14337 34730;34731 40347;40348 40348 2 NDLAVVDVR Unmodified 999.53491 0.53490874 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 4 0 1 53.511 53.511 2 0.019714 17891 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.305 23.196 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 11237 14906 1333 14338 34732 40349 40349 1 NDLVEALKR Unmodified 1056.5928 0.59275797 495 A2AMW0 Capzb yes yes 0 0 0 1 9.25 2.28 1 1 1 1 55.836 55.836 3 0.0029436 16702 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.417 27.353 562.98 547.35 424.38 681.77 554.03 948.92 529 548 418 648 568 905 3 3 2 3 3 4 53983 14907 495 14339 34733;34734;34735;34736 40350;40351;40352;40353 40351 4 NDPIGEVSIPLNK Unmodified 1394.7405 0.74054442 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 0 6 0 1 69.46 69.46 3 0.00010422 24488 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.588 54.747 59.806 0 47.356 47.456 0 0 56 0 46 46 0 0 1 0 1 1 0 0 6217.4 14908 355 14340 34737 40354 40354 1 NDPLLVGVPASENPFK Unmodified 1695.8832 0.88318591 1088 Q61016;G3X9Q2 Gng7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7;Guanine nucleotide-binding protein subunit gamma yes no 0 0 0 0 5.5 0.5 1 1 78.046 78.046 3 0.0037977 28485 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.704 26.381 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14909 1088 14341 34738;34739 40355;40356 40356 2 NDPLLVGVPASENPFKDK Unmodified 1939.0051 0.005091963 1088 Q61016;G3X9Q2 Gng7 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7;Guanine nucleotide-binding protein subunit gamma yes no 0 0 0 1 7 0 1 72.045 72.045 3 0.034836 24880 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.999 20.298 0 20.216 0 40.441 0 29.848 0 19 0 37 0 28 0 1 0 1 0 1 2933.4 14910 1088 14342 34740 40357 40357 1 NDPPPRDNR Unmodified 1079.5108 0.51081926 810 E0CZ72;P28740;F8VQ42;F6RLL5 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 1 1 0 1 16.873 16.873 3 0.056665 2710 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.292 23.336 0 4.209 2.8094 4.1321 3.8515 4.1541 0 4 3 4 4 4 0 1 1 1 1 1 386.04 14911 810 14343 34741 40358 40358 1 NDPQLSLISAMIK Unmodified 1428.7647 0.76465068 1807 P70297;Q3UGN9;A2ARJ0 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 8 0 1 83.464 83.464 3 0.0086952 29678 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.112 24.876 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14912 1807 14344 34742 40359 40359 1 NDQCYDDIR Unmodified 1197.4721 0.47205049 3336 Q9WUM4;E9PX03;E9PZJ0;E9PVJ1 Coro1c Coronin-1C;Coronin yes no 0 0 0 0 4.75 4.82 1 1 1 1 38.813 38.813 2 0.00090464 10741 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.61 54.047 236.16 124.24 238.06 145.85 280.15 154.09 222 130 232 148 278 148 3 2 3 3 3 2 49003 14913 3336 14345 34743;34744;34745;34746 40360;40361;40362;40363 40360 4 NDQCYEDIR Unmodified 1211.4877 0.48770055 3335 Q9WUM3;D3YUG6 Coro1b Coronin-1B;Coronin yes no 0 0 0 0 2 0.816 1 1 1 39.744 39.744 2 2.2796E-07 11927 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.27 74.064 148.18 62.969 108.95 173.13 154.63 47.825 139 65 112 167 157 46 2 1 2 2 2 1 30163 14914 3335 14346 34747;34748;34749 40364;40365;40366 40366 3 NDQDTWDYTNPNLSGQGDPGSNPNKR Unmodified 2889.255 0.25500509 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 1 4 0 1 53.269 53.269 4 0.00025558 17848 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.659 36.498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6237.2 14915 1110 14347 34750 40367 40367 1 NDSEQFAALLLVTK Unmodified 1547.8195 0.81952302 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 8.67 2.21 1 1 1 2 1 85.803 85.803 2;3 2.6004E-07 29993 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.07 67.533 345.8 208.62 244.94 121.66 230.79 340.95 324 204 232 116 232 324 5 4 5 4 6 4 83939 14916 3355 14348 34751;34752;34753;34754;34755;34756 40368;40369;40370;40371;40372;40373;40374 40373 7 NDSEQFAALLLVTK Deamidation (N) 1548.8035 0.80353861 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 1 0 0 6 0 1 92.115 92.115 3 0.022447 34839 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.434 31.528 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 1334.4 14917 3355 14348 34757 40375 40375 1134 1 NDSFTACIELGK Unmodified 1353.6235 0.62346575 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 66.402 66.402 3 3.3811E-05 24079 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.629 66.394 80.105 73.335 0 239.57 163.68 69.29 75 74 0 222 167 65 2 2 0 3 3 1 25759 14918 2148 14349 34758;34759;34760 40376;40377;40378;40379 40379 4 NDSIPQEDFTPDVYR Deamidation (N) 1795.7901 0.79007339 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 1 0 0 2.5 0.5 1 1 66.56 66.56 3 0.011756 23925 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.084 25.506 20.292 18.848 0 20.767 0 40.508 19 19 0 19 0 38 1 1 0 1 0 1 1382.1 14919 3373 14350 34761;34762 40380;40381 40380 1136 2 NDSVIVDTFHGLFK Unmodified 1590.8042 0.80420731 57 A0A0A6YW28;P35123;A0A0A6YVY7 Usp4 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 4 no no 0 0 0 0 7 0 1 79.471 79.471 3 0.0076954 28406 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.807 17.472 0 0 38.813 27.409 46.857 0 0 0 37 28 46 0 0 0 1 1 1 0 1788.2 14920 57 14351 34763 40382 40382 1 NDSYTLHK Unmodified 976.46141 0.46140945 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 6 0 1 39.536 39.536 3 0.019294 10433 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.608 24.038 147.98 116.07 97.631 112.76 145.71 114.17 139 120 102 111 148 111 1 1 1 1 1 1 3920.1 14921 1713 14352 34764 40383 40383 1 NDTSGEYK Unmodified 912.38249 0.38249043 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 34.637 34.637 2 0.055114 8984 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.56 31.375 29.904 27.776 0 39.925 27.454 0 28 28 0 37 28 0 1 1 0 1 1 0 2144.1 14922 1050;1380 14353 34765 40384 40384 1 NDTVTPAELSELR Unmodified 1443.7205 0.72053726 240 A0A140T8I9;E9Q3L2;A0A338P7D3;A0A338P6F9 Pi4ka yes no 0 0 0 0 3 0 1 60.454 60.454 2 3.6609E-13 21480 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.54 70.934 9.657 0 0 30.466 7.3261 20.045 9 0 0 28 9 19 1 0 0 1 1 1 3868.9 14923 240 14354 34766 40385 40385 1 NDVCRPGR Unmodified 972.45595 0.45594691 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 1 4 0 1 21.833 21.833 3 0.0027623 3449 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.89 6.074 99.789 0 0 59.388 96.779 56.934 93 0 0 56 97 56 1 0 0 1 1 1 18258 14924 1376 14355 34767 40386 40386 1 NDVFDSLGISPDLLPDDFVR Unmodified 2233.0903 0.090278155 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 6 0 1 98.713 98.713 3 1.1152E-06 36928 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.985 52.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14925 3316 14356 34768 40387 40387 1 NDVITVQTPAFAESVTEGDVR Deamidation (N) 2248.0859 0.085921059 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 1 0 0 5 4.05 1 2 1 1 74.919 74.919 2;3 3.4548E-22 28349 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.92 112.88 40.638 56.844 0 70.903 80.331 0 38 56 0 66 79 0 2 3 0 3 3 0 29139 14926 3049 14357 34769;34770;34771;34772;34773 40388;40389;40390;40391;40392;40393 40391 1064 6 NDVITVQTPAFAESVTEGDVR Unmodified 2247.1019 0.10190547 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 5 0 1 72.478 72.478 3 1.3989E-07 26537 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.979 54.262 0 9.4451 27.075 59.594 0 20.254 0 9 28 56 0 19 0 1 2 2 0 1 3162.3 14927 3049 14357 34774 40394;40395 40394 2 NDVLAHQATVATVNK Unmodified 1579.8318 0.83181904 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 6 0 1 48.82 48.82 3 0.021505 14771 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.338 23.085 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14928 581 14358 34775 40396 40396 1 NDVPLPTDSR Unmodified 1112.5462 0.54620171 3092 Q9D8B7 Jam3 Junctional adhesion molecule C yes yes 0 0 0 0 4 0 1 46.49 46.49 2 0.0056257 14585 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.944 17.385 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4126.2 14929 3092 14359 34776 40397 40397 1 NDYLLNLAATNAAISK Unmodified 1690.889 0.88899957 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 9 0 1 77.721 77.721 3 3.7851E-05 26264 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.307 70.75 0 29.792 0 69.857 63.159 47.234 0 28 0 65 65 46 0 1 0 1 1 1 5600.9 14930 965 14360 34777 40398 40398 1 NDYQEEFQK Unmodified 1199.5095 0.50948185 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 8.5 4.5 1 1 49.916 49.916 2;3 0.015701 16399 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.893 42.955 108.13 138.87 103.88 0 0 20.254 102 139 102 0 0 19 2 2 1 0 0 1 8179.2 14931 2686 14361 34778;34779 40399;40400 40399 2 NDYVAAER Unmodified 936.43011 0.43010932 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 3.5 0.5 1 1 34.491 34.491 2 0.0017956 9435 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.22 77.347 371.52 79.657 429.84 281.85 563.29 490.39 349 83 410 289 567 472 2 1 1 1 2 1 67339 14932 775 14362 34780;34781 40401;40402 40401 2 NEAIQAAHDSVAQEGQCR Deamidation (N) 1983.8705 0.87046575 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 1 0 0 2 0 1 42.957 42.957 3 1.5847E-10 13146 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.705 68.112 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14933 3302 14363 34782 40403 40403 1126 1 NEAIQAAHDSVAQEGQCR Unmodified 1982.8865 0.88645017 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 5.12 3.14 3 2 1 1 1 40.795 40.795 3;4 3.1693E-46 11890 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.73 146.68 128.57 198.96 198.81 196.99 0 335.79 121 195 196 186 0 315 4 6 6 5 0 7 162910 14934 3302 14363 34783;34784;34785;34786;34787;34788;34789;34790 40404;40405;40406;40407;40408;40409;40410;40411;40412;40413 40408 10 NEDDLELAR Unmodified 1073.4989 0.49891717 2309 Q80U19 Daam2 Disheveled-associated activator of morphogenesis 2 yes yes 0 0 0 0 1 0 1 46.716 46.716 2 0.007413 13805 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.655 11.662 39.564 27.124 0 40.441 0 29.848 37 28 0 37 0 28 1 1 0 1 0 1 3533.8 14935 2309 14364 34791 40414 40414 1 NEDEDSPNK Unmodified 1046.4152 0.41524712 1754 P62900;A0A0A6YX26 Rpl31 60S ribosomal protein L31 yes no 0 0 0 0 1.5 0.5 1 1 31.063 31.063 2;3 1.2896E-05 7235 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 150.81 80.285 89.906 44.908 0 88.861 156.89 94.661 84 46 0 84 157 93 2 1 0 2 2 2 10821 14936 1754 14365 34792;34793 40415;40416 40415 2 NEDELELR Unmodified 1016.4775 0.47745344 213 A0A0R4J1W0;B2RXQ9;Z4YJR7;A0A0R4J1T1;B7ZWM6;B9EKP8;Q3UTJ2 Sorbs2 Sorbin and SH3 domain-containing protein 2 yes no 0 0 0 0 1 0 1 46.496 46.496 2 0.01178 13673 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.051 16.808 29.673 42.243 26.589 22.963 31.423 28.951 28 42 28 23 32 28 1 1 1 1 1 1 14323 14937 213 14366 34794 40417 40417 1 NEDFVEIAR Unmodified 1091.5247 0.52473799 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 3.5 0.5 1 1 54.769 54.769 2 0.00073444 18902 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.7 64.535 256.62 166.78 190.37 209.26 125.84 164.84 241 176 195 204 130 158 2 2 2 2 1 2 23670 14938 927 14367 34795;34796 40418;40419 40418 2 NEDVDPMAASAEYELEK Unmodified 1909.8251 0.82513827 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 3 0 1 68.912 68.912 3 1.2928E-08 25400 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.01 97.175 48.992 16.113 47.809 16.825 0 0 46 19 46 18 0 0 1 1 1 1 0 0 4980.9 14939 2255 14368 34797 40420 40420 1 NEDVQLR Unmodified 872.43519 0.4351947 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;G3UXQ1;H3BJ83 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 2.5 0.5 1 1 36.5 36.5 2 2.242E-15 10401 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 180.18 64.719 516.88 655.77 758.64 779.35 848.17 636.72 489 661 772 769 866 620 2 2 2 2 2 2 160080 14940 2272 14369 34798;34799 40421;40422 40422 2 NEEDATELVGLAQAVNAR Deamidation (N) 1899.9174 0.91739917 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 0 3 1 1 1 72.355 72.355 3 0.00012793 26438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.298 50.894 20.265 0 20.456 0 57.258 38.375 19 0 19 0 56 37 1 0 1 0 2 1 6140.4 14941 1876 14370 34800;34801 40423;40424 40424 762 2 NEEDATELVGLAQAVNAR Unmodified 1898.9334 0.93338358 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 73.581 73.581 2;3 9.4644E-27 27577 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 141.13 113.98 168.04 142.75 249.01 210.73 121.3 224.66 158 148 251 204 130 214 1 3 4 2 2 3 96755 14942 1876 14370 34802;34803;34804;34805 40425;40426;40427;40428;40429 40425 5 NEERPLR Unmodified 912.47773 0.47772821 2024 Q3V3V9 Rltpr Leucine-rich repeat-containing protein 16C yes yes 0 0 0 1 3 0 1 23.148 23.148 3 0.057766 4278 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.682 10.671 39.701 0 0 50.278 0 49.036 37 0 0 46 0 46 1 0 0 1 0 1 2923.8 14943 2024 14371 34806 40430 40430 1 NEFIPTNFEILSLEK Unmodified 1792.9247 0.92471638 986 F6RPJ9;Q9JHR7 Ide Insulin-degrading enzyme yes no 0 0 0 0 8 0 1 88.724 88.724 3 0.0044311 32140 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.159 26.835 11.734 0 11.54 6.7967 8.8542 7.2093 11 0 11 7 9 7 1 0 1 1 1 1 1170.4 14944 986 14372 34807 40431 40431 1 NEFLGELQK Unmodified 1076.5502 0.55022446 112;3317 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;Q9R1T4 Sept11;Sept6 Septin-11;Septin-6 no no 0 0 0 0 6 0 1 64.344 64.344 3 0.010896 22029 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.784 18.227 0 0 80.068 0 86.818 0 0 0 74 0 83 0 0 0 1 0 1 0 4419.7 14945 112;3317 14373 34808 40432 40432 1 NEFNLESK Unmodified 979.46108 0.4610751 1556 P46638;G3UY29;E9Q3P9;F8WGS1;P62492 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 9 4 1 1 53.345 53.345 2;3 0.004311 17742 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.71 47.332 196.85 141.55 158.48 252.47 79.388 78.884 185 148 158 241 83 74 2 2 1 2 1 1 18437 14946 1556 14374 34809;34810 40433;40434 40434 2 NEGAEPDLIR Unmodified 1112.5462 0.54620171 1286 O88983 Stx8 Syntaxin-8 yes yes 0 0 0 0 2 0 1 46.146 46.146 2 0.014681 14466 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.305 27.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14947 1286 14375 34811 40435 40435 1 NEGFYADPYLYHEGR Unmodified 1829.8009 0.80091285 504 D3Z781;E9QAU4;A2AQ25;Q8BHR1 Etl4;Skt Sickle tail protein yes no 0 0 0 0 4 0 1 57.084 57.084 3 0.0008174 19644 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.246 45.406 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2870.8 14948 504 14376 34812 40436 40436 1 NEGVATYAAAVLFR Unmodified 1480.7674 0.76742787 1878 Q02248;F7CRC6 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 10 2.16 1 1 1 78.883 78.883 2;3 0.00011188 26798 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.444 54.485 108.59 71.068 84.332 76.43 27.583 78.884 102 75 83 75 28 74 3 3 2 3 1 2 18095 14949 1878 14377 34813;34814;34815 40437;40438;40439 40438 3 NEGVSSVLLGASNAEQLMENIGAIQVLPK Unmodified 2980.5539 0.55393621 802 Q3UPV6;E0CXZ9;P62482 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 0 8 0.816 1 1 1 102.95 102.95 4 3.9067E-19 37019 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.45 60.356 7.4686 17.024 7.1226 15.847 21.299 43.269 7 16 7 15 22 41 1 2 1 2 3 3 5995.3 14950 802 14378 34816;34817;34818 40440;40441;40442;40443 40440 4 NEIDNYEEDYQK Unmodified 1558.6423 0.64234652 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 2 0.816 1 1 1 53.546 53.546 2;3 2.0192E-05 16542 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.204 62.47 40.774 0 0 20.767 0 20.254 38 0 0 19 0 19 2 0 0 1 0 1 3471.7 14951 2148 14379 34819;34820;34821 40444;40445;40446 40444 3 NEIGILK Unmodified 785.4647 0.46470391 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 6 0 1 57.408 57.408 2 0.027413 18899 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.302 12.755 0 164.72 202.97 201.04 0 285.69 0 158 205 195 0 268 0 1 1 1 0 1 21377 14952 1986 14380 34822 40447 40447 1 NEIPEEALYK Unmodified 1204.5976 0.59756858 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 59.522 59.522 2;3 0.00046012 20805 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.313 54.304 326.25 131.9 278.46 144.47 28.359 315.54 306 140 269 140 28 296 4 3 3 3 1 3 58586 14953 1096 14381 34823;34824;34825;34826 40448;40449;40450;40451;40452 40449 5 NEKGEIEQER Unmodified 1230.584 0.58404378 1042;1096;487 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55 Atp2b1;Atp2b2;Atp2b3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 1 8 5 1 1 34.606 34.606 3 0.0069091 8051 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.563 34.994 108.02 118.05 140.22 57.229 93.658 28.847 102 120 139 56 93 28 2 2 2 1 2 1 24947 14954 1096;1042;487 14382 34827;34828 40453;40454;40455 40455 3 NEKSEEEQSSASVK Unmodified 1550.706 0.70600941 3389 Q9Z204 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 1 4 0 1 36.446 36.446 3 0.00038877 9862 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.136 65.655 0 69.16 0 0 0 49.036 0 65 0 0 0 46 0 1 0 0 0 1 4810.9 14955 3389 14383 34829 40456 40456 1 NELEEMQR Unmodified 1047.4655 0.46550855 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 2.5 0.5 1 1 42.407 42.407 2 0.0010686 12935 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 146.03 96.07 470.26 267.26 446.68 416.81 540.36 520.78 442 288 447 415 552 503 2 2 2 2 2 2 57279 14956 1681 14384 34830;34831 40457;40458 40457 2 NELESYAYSLK Unmodified 1315.6296 0.62959699 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 6 0 1 68.075 68.075 3 0.00055631 23900 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.522 57.28 49.073 0 47.879 36.929 34.99 58.698 46 0 46 37 37 56 1 0 1 1 1 1 10905 14957 1419 14385 34832 40459 40459 1 NELHNLLDKPQLQGIPVLVLGNK Unmodified 2551.4486 0.44860692 980 F6QKK2;Q8VEH3;A0A0N4SVB8;Q9CQW2 Arl8a;Arl8b ADP-ribosylation factor-like protein 8A;ADP-ribosylation factor-like protein 8B yes no 0 0 0 1 10 0.816 1 1 1 82.084 82.084 4;5 1.2535E-11 28452 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.917 67.107 30.006 135.73 33.893 58.358 73.412 117.07 28 130 37 56 74 111 1 3 1 1 2 2 13533 14958 980 14386 34833;34834;34835 40460;40461;40462 40460 3 NELQDAK Unmodified 816.39775 0.39774656 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 4 0 1 39.86 39.86 3 0.063714 11465 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.823 12.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14959 287 14387 34836 40463 40463 1 NENASFPR Unmodified 933.43044 0.43044367 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 4 0 1 36.421 36.421 2 0.0079905 9884 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.01 72.079 0 67.546 96.573 0 0 78.884 0 65 93 0 0 74 0 1 1 0 0 1 11759 14960 2886 14388 34837 40464 40464 1 NENGAPEDEENFEEAIK Unmodified 1933.8177 0.8177447 812 E0CZE0;Q8VBW6 Nae1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 0 1.5 0.5 1 1 60.139 60.139 3 2.802E-06 19591 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 82.449 71.344 20.134 28.121 79.361 0 28.291 38.635 19 28 75 0 28 37 1 1 2 0 1 2 11080 14961 812 14389 34838;34839 40465;40466 40465 2 NENLAANFLLQQNFDED Unmodified 1993.9017 0.9017491 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 5.5 0.5 1 1 89.84 89.84 3 2.1478E-06 34263 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.692 81.692 9.5583 25.571 0 0 0 0 9 25 0 0 0 0 1 2 0 0 0 0 4597.8 14962 1621 14390 34840;34841 40467;40468 40467 2 NENQEVIGVAELVNK Unmodified 1654.8526 0.85261407 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 5 0 1 71.22 71.22 3 1.9967E-05 25970 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.998 61.841 49.128 0 38.595 26.737 83.292 66.913 46 0 37 28 83 65 1 0 1 1 1 1 4626.9 14963 2054 14391 34842 40469 40469 1 NENTFLDLTVQQIEHLNK Unmodified 2155.0909 0.090946857 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 7 0.707 1 2 1 83.657 83.657 3;4 7.3974E-06 30381 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.522 47.367 20.27 0 67.681 57.174 0 39.442 19 0 65 56 0 37 1 0 2 2 0 1 5847.1 14964 2783 14392 34843;34844;34845;34846 40470;40471;40472;40473 40471 4 NENYFDDIPR Unmodified 1281.5626 0.56258006 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;Q8BIZ1;S4R286;A0A0R4J2A2;S4R2H8;S4R2E3;A0A140T8U6;S4R235;S4R1K4 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 3.5 0.5 1 1 60.227 60.227 2 6.7971E-05 21136 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.62 81.38 128.11 99.468 25.251 59.703 65.675 67.416 120 102 28 56 65 65 2 2 1 1 1 1 14525 14965 3447 14393 34847;34848 40474;40475 40475 2 NEPEPEQPIPR Unmodified 1304.6361 0.63607935 1061 G3UXM5;G3UWV4;Q69Z98;G3UZ19;G3UYN4 Brsk2 Serine/threonine-protein kinase BRSK2 yes no 0 0 0 0 1.5 0.5 1 1 41.251 41.251 2 1.0949E-07 11647 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.89 88.672 0 48.944 19.261 69.548 18.537 39.442 0 46 19 65 19 37 0 1 1 2 1 1 13152 14966 1061 14394 34849;34850 40476;40477 40476 2 NEPLEDAEANVVGSER Unmodified 1727.7962 0.7962214 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4;H3BJA6;Q8BMP0;H3BKE7 Ppp1r9a yes no 0 0 0 0 1.5 0.5 1 1 56.726 56.726 3 8.3806E-06 19231 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.97 48.322 20.149 19.892 79.855 0 65.655 67.984 19 19 75 0 65 65 1 1 3 0 2 1 40346 14967 1119 14395 34851;34852 40478;40479;40480 40479 3 NEPQNAAGAPGR Deamidation (N) 1181.5425 0.54251332 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 1 0 0 1 0 2 29.5 29.5 2 0.011355 6658 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.338 51.153 0 0 0 0 38 0 0 0 0 0 38 0 0 0 0 0 2 0 3048.2 14968 1514 14396 34853;34854 40481;40482;40483 40482 565 3 NEPQNAAGAPGR Unmodified 1180.5585 0.55849773 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 0 0 0 5 4.05 1 2 1 1 27.766 27.766 2;3 7.988E-15 6329 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.48 105.7 84.411 56.172 77.637 33.177 73.08 111.98 79 57 75 32 75 107 3 3 4 2 4 4 19555 14969 1514 14396 34855;34856;34857;34858;34859 40484;40485;40486;40487;40488;40489 40485 6 NEPQNPGANSAR Deamidation (N) 1254.5589 0.55889166 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 1 0 0 1 0 1 27.428 27.428 2 4.7104E-31 5592 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 181.49 143.21 39.391 17.59 37.157 37.531 46.392 0 37 19 37 37 46 0 2 1 1 1 2 0 4305 14970 2921 14397 34860 40490;40491 40491 1025 2 NEPQNPGANSAR Unmodified 1253.5749 0.57487608 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 0 0 0 2 0 2 25.929 25.929 2;3 0.0010959 5205 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.643 31.656 19 0 0 0 28 0 19 0 0 0 28 0 1 0 0 0 1 0 4971.5 14971 2921 14397 34861;34862 40492;40493 40492 2 NEPTTPSWLAEIPPWVPK Unmodified 2061.0571 0.057127534 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8.33 2.29 1 2 1 1 1 90.615 90.615 3;4 3.786E-06 35833 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.235 51.871 29.999 87.664 58.359 110.93 56.553 188.97 28 83 55 102 56 178 2 3 3 4 2 6 25237 14972 510 14398 34863;34864;34865;34866;34867;34868 40494;40495;40496;40497;40498;40499;40500;40501 40500 8 NEPYENDGEK Unmodified 1193.4837 0.48366103 1615 Q8JZZ5;P53811 Pitpnb Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 0 3 0 1 38.448 38.448 3 0.041857 11344 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.299 22.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14973 1615 14399 34869 40502 40502 1 NESCSVNYTTDFIYQLYSEEGK Unmodified 2646.1432 0.14317794 2507 Q8C605;Q9WUA3;F6YL81 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 7.75 3.11 1 1 1 1 87.192 87.192 3;4 5.8328E-15 33346 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.082 70.768 89.502 37.571 103.94 84.524 0 35.178 84 37 102 83 0 33 3 1 3 3 0 2 12928 14974 2507 14400 34870;34871;34872;34873 40503;40504;40505;40506 40503 4 NESECLSNIR Unmodified 1220.5455 0.54554978 3191 Q9ES28;A0A1B0GSX2 Arhgef7 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 0 3 0 1 41.81 41.81 2 0.013347 12858 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.577 33.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14975 3191 14401 34874 40507 40507 1 NESIVPFSPYEVK Unmodified 1507.7559 0.75586013 1891 Q07409 Cntn3 Contactin-3 yes yes 0 0 0 0 12 0 1 59.039 59.039 4 0.04332 13705 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.006 14.544 0 57.797 106.9 0 0 108.73 0 56 102 0 0 102 0 1 1 0 0 1 8868 14976 1891 14402 34875 40508 40508 1 NESSHGGEFGCTMEELR Unmodified 1938.7836 0.78362458 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 3 0 1 48.123 48.123 3 5.8138E-06 15786 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.937 76.015 0 29.188 36.139 48.124 0 29.848 0 28 37 46 0 28 0 1 1 1 0 1 5719 14977 1042 14403 34876 40509 40509 1 NETDESQIQLAGGDVELPR Unmodified 2069.9865 0.98654137 2640 Q8R1B5 Cplx3 Complexin-3 yes yes 0 0 0 0 2 0 1 64.363 64.363 3 1.2884E-07 22850 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.228 69.17 9.51 29.151 0 20.767 0 0 9 28 0 19 0 0 1 1 0 1 0 0 3748.3 14978 2640 14404 34877 40510 40510 1 NETGGGEGVEVLVNEPYEK Unmodified 2018.9433 0.94327957 1148 J3QQ30;J3QPW1;P53810;F8WGG5 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 3 0 1 64.701 64.701 3 4.0171E-07 23366 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.091 56.785 0 29.792 0 20.234 28.359 0 0 28 0 19 28 0 0 1 0 1 1 0 4684.6 14979 1148 14405 34878 40511 40511 1 NETGGGEGVEVLVNEPYEKDDGEK Unmodified 2563.1562 0.15618547 1148 J3QQ30;J3QPW1;P53810;F8WGG5 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 1 2.5 0.5 1 1 61.362 61.362 4 6.7423E-37 21781 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 143.29 123.74 98.561 121.97 148.03 120.69 145.91 163.2 93 121 149 121 148 157 2 2 3 3 2 3 12789 14980 1148 14406 34879;34880 40512;40513;40514 40514 3 NETIILANTENTELR Unmodified 1729.8846 0.88464248 2776 Q91YR1 Twf1 Twinfilin-1 yes yes 0 0 0 0 4 0 1 61.183 61.183 3 1.7929E-05 21483 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.574 48.71 0 0 28.131 48.601 0 49.036 0 0 28 46 0 46 0 0 1 1 0 1 4365 14981 2776 14407 34881 40515 40515 1 NETLGGTCLNVGCIPSK Unmodified 1818.8604 0.86041834 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 8.25 2.77 1 2 1 64.835 64.835 3;4 2.5051E-06 22298 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.533 59.039 226.31 188.6 379.81 424.22 474.5 388.05 213 195 380 417 485 375 3 3 4 4 4 3 42195 14982 1164 14408 34882;34883;34884;34885 40516;40517;40518;40519 40516 4 NETLNTSTAPNPVR 2 Deamidation (N) 1514.7213 0.72126554 877 E9Q0N2 Ptprh Protein-tyrosine-phosphatase yes yes 0 2 0 0 3 0 1 98.061 98.061 2 0.042619 32467 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 65.5 9.951 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 5432.1 14983 877 14409 34886 40520 40520 230;231 1 NEVAALTAAGK Deamidation (N) 1044.5451 0.54513908 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 1 0 0 5 0 1 60.604 60.604 3 0.026061 21027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.013 21.666 0 20.216 0 0 35.992 78.923 0 19 0 0 37 75 0 1 0 0 1 1 2997.7 14984 484;2493 14410 34887 40521 40521 120 1 NEVAALTAAGK Unmodified 1043.5611 0.56112349 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 7.8 2.79 1 1 1 1 1 54.668 54.668 2;3 4.8698E-16 18300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.04 91.491 275.79 392.43 235.49 357.72 166.98 293.17 259 390 241 343 167 277 3 4 3 4 2 3 84173 14985 484;2493 14410 34888;34889;34890;34891;34892 40522;40523;40524;40525;40526 40526 5 NEVHTMLGQSTEEIR Unmodified 1742.8257 0.82574739 1325 P08226;A0A1B0GX15;G3UWN5;G3UZM8 Apoe Apolipoprotein E yes no 0 0 0 0 4 0 1 48.628 48.628 3 0.01051 15574 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.86 22.616 0 0 0 0 37.384 38.375 0 0 0 0 37 37 0 0 0 0 1 1 5060.8 14986 1325 14411 34893 40527 40527 1 NEWGSLLEELVK Unmodified 1415.7296 0.72964538 1357 P12382;A0A1W2P7T1 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes no 0 0 0 0 8.67 2.05 2 2 1 1 93.902 93.902 2;3 1.1244E-05 34772 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.44 67.015 63.08 85.68 33.983 39.501 0 127.92 59 84 34 37 0 120 3 4 2 2 0 3 17203 14987 1357 14412 34894;34895;34896;34897;34898;34899 40528;40529;40530;40531;40532;40533 40529 6 NEYLQADEATKR Unmodified 1436.6896 0.68957148 3208 Q9JI90;G3XA54 Rnf14 E3 ubiquitin-protein ligase RNF14 yes no 0 0 0 1 5 0 1 42.563 42.563 3 0.051735 12338 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.52 20.046 78.73 42.346 77.13 0 54.896 107.17 74 46 74 0 56 102 1 1 1 0 1 1 2714.8 14988 3208 14413 34900 40534 40534 1 NFAALLEEHDIFVPEDDDDDD Unmodified 2433.0132 0.013209626 3107 Q9DB10;A0A2R8VHK6;E0CZF0 Smdt1 Essential MCU regulator, mitochondrial yes no 0 0 0 0 5 0 1 93.354 93.354 3 1.1793E-05 35036 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.814 44.213 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1080 14989 3107 14414 34901 40535 40535 1 NFAFLEFR Unmodified 1042.5236 0.52361577 1457 Q3KQM4;Q80XR5;P26369 U2af2 Splicing factor U2AF 65 kDa subunit yes no 0 0 0 0 9 0 1 76.965 76.965 2 0.011853 25914 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.548 51.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14990 1457 14415 34902 40536 40536 1 NFAIGYYLK Unmodified 1087.5702 0.57023162 789 D3Z7P3;D3Z7P4;F6U529 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 11 0.816 1 1 1 73.609 73.609 2;3 0.00019007 19096 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.06 84.636 167.74 133.29 276.31 132.63 61.673 226.36 158 134 269 130 65 214 3 2 4 2 1 3 83826 14991 789 14416 34903;34904;34905 40537;40538;40539;40540 40540 4 NFATSLYSMIK Unmodified 1273.6377 0.63765925 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 10.5 0.5 1 1 81.45 81.45 2;3 2.1725E-08 25219 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.1 93.513 0 0 57.635 66.389 64.94 0 0 0 56 65 65 0 0 0 1 1 1 0 12706 14992 1577 14417 34906;34907 40541;40542 40542 2 NFDDYMK Unmodified 931.37457 0.37456828 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 0 0 0 6 0 1 57.6 57.6 2 0.027635 18873 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.711 54.731 0 0 67.412 65.494 81.51 66.964 0 0 65 65 83 65 0 0 1 1 1 1 8519.1 14993 1352 14418 34908 40543 40543 1 NFDEALVDYFCDEFK Unmodified 1910.8033 0.80328061 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 8 3.56 1 1 1 95.914 95.914 3 3.1419E-05 38480 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.259 71.774 72.645 44.085 16.24 34.885 57.953 60.174 68 45 16 33 58 58 3 2 1 2 2 2 16119 14994 1581 14419 34909;34910;34911 40544;40545;40546 40546 3 NFDEILR Unmodified 905.46068 0.46068117 2194 Q6GT24;D3Z0Y2;O08709;Q8BG37 Prdx6;Prdx6b Peroxiredoxin-6 yes no 0 0 0 0 9.5 3.5 1 1 60.206 60.206 2 0.0053831 21070 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.81 90.044 288.83 344.55 500.7 456.4 123.8 541.19 273 350 502 447 130 511 2 3 3 3 2 3 118460 14995 2194 14420 34912;34913 40547;40548;40549 40549 3 NFDFEDVFVNIPR Unmodified 1610.7729 0.77290718 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 6.33 0.471 2 1 89.561 89.561 2;3 0.0012608 33050 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.898 46.485 0 38.152 0 20.767 18.538 38.913 0 37 0 19 19 37 0 3 0 1 1 1 12060 14996 141 14421 34914;34915;34916 40550;40551;40552 40552 3 NFDLRPGVIVR Unmodified 1284.7303 0.73025451 225 A0A0U1RNT6;A0A0U1RNK6;Q3THS6;A0A0U1RQB0;Q91X83 Mat2a;Mat1a S-adenosylmethionine synthase isoform type-2;S-adenosylmethionine synthase isoform type-1 yes no 0 0 0 1 8.5 0.5 1 1 56.924 56.924 3 0.014242 17149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.401 38.189 69.165 59.584 97.439 63.703 178.87 66.962 65 56 93 65 176 65 1 1 1 1 2 1 17223 14997 225 14422 34917;34918 40553;40554 40553 2 NFDPPIEEFNDPYQQLVTTFIK Unmodified 2654.2904 0.29043453 1023 F7CIP8;Q9CQF9 Pcyox1 Prenylcysteine oxidase yes no 0 0 0 0 7.5 0.5 1 1 99.535 99.535 3;4 0.019957 36395 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.337 19.408 14.864 8.246 19.602 18.506 0 29.848 14 9 19 18 0 28 1 1 1 2 0 2 1835.3 14998 1023 14423 34919;34920 40555;40556 40555 2 NFDPVLPPLPDNIDEDFEEESVK Unmodified 2657.2385 0.23845854 2259 Q6XE40;O88910;B1AQF7 Mpp3 MAGUK p55 subfamily member 3 yes no 0 0 0 0 4.5 0.5 1 1 91.195 91.195 3;4 2.0113E-06 33904 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.747 40.155 0 9.4408 8.0896 0 0 12.792 0 9 8 0 0 12 0 1 1 0 0 1 1139.1 14999 2259 14424 34921;34922 40557;40558 40557 2 NFDSLISSNCTEELENAGVEVLK Unmodified 2567.2061 0.20611255 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 5 0 1 86.992 86.992 3 5.026E-15 33248 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.683 66.373 0 0 9.738 0 5.23 0 0 0 9 0 5 0 0 0 1 0 1 0 1633.3 15000 1566 14425 34923 40559 40559 1 NFFPIAGLEFSELPVTSPLGIAVIK Unmodified 2658.4673 0.46727668 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 109.71 109.71 4 2.1001E-16 37512 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.656 52.612 27.479 19.518 22.408 0 7.1826 10.455 27 20 21 0 7 10 3 2 2 0 1 2 14327 15001 570 14426 34924;34925;34926;34927 40560;40561;40562;40563;40564 40560 5 NFGEDMDDER Unmodified 1226.451 0.4509807 1484 P29341 Pabpc1 Polyadenylate-binding protein 1 yes yes 0 0 0 0 1 0 1 45.983 45.983 2 6.0242E-05 13487 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.43 85.36 19.903 27.479 58.072 17.306 0 39.442 19 28 56 19 0 37 1 1 1 1 0 1 10048 15002 1484 14427 34928 40565 40565 1 NFGEDMDDER Oxidation (M) 1242.4459 0.44589532 1484 P29341 Pabpc1 Polyadenylate-binding protein 1 yes yes 0 0 1 0 1 0 1 37.296 37.296 2 0.058575 9990 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.643 56.752 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15003 1484 14427 34929 40566 40566 1 NFGLYNER Unmodified 1011.4774 0.47739386 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 8.5 2.69 1 1 1 1 50.605 50.605 2 0.00094396 16311 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.36 103.25 636.45 429.3 329.92 721.43 520.92 652.98 597 449 334 687 540 624 4 4 2 4 3 3 148330 15004 1311 14428 34930;34931;34932;34933 40567;40568;40569;40570 40570 4 NFIAMGK Unmodified 779.4 0.39999517 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 11 0 1 57.83 57.83 2 0.042204 14739 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.616 50.103 0 0 190.43 0 0 108.73 0 0 176 0 0 102 0 0 1 0 0 1 10582 15005 607 14429 34934 40571 40571 1 NFIELVR Unmodified 889.50215 0.50215205 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 8 0 1 65.113 65.113 2 0.021996 21011 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.75 30.772 197.87 124.98 0 0 168.08 253.18 185 130 0 0 169 242 1 1 0 0 1 1 24336 15006 2727 14430 34935 40572 40572 1 NFILDQCNVYNSGQR Unmodified 1826.837 0.83698078 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 8 0 1 62.386 62.386 3 1.9967E-05 19681 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.998 56.16 0 38.922 26.668 29.015 0 0 0 37 28 28 0 0 0 1 1 1 0 0 4115 15007 1873 14431 34936 40573 40573 1 NFILDQTNVSAAAQR Unmodified 1646.8376 0.8376327 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 9.33 2.62 1 1 1 61.677 61.677 2;3 7.4469E-32 21836 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 166.62 126.7 157.45 105.17 138.4 130.74 165.03 182.91 148 111 139 130 167 176 2 2 2 3 2 3 42355 15008 2714 14432 34937;34938;34939 40574;40575;40576 40576 3 NFINNPLAQADWAAK Unmodified 1671.8369 0.83690442 2696 Q8VDD5;F2Z494 Myh9 Myosin-9 yes no 0 0 0 0 9 0 1 76.976 76.976 3 1.0762E-07 25920 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.932 58.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15009 2696 14433 34940 40577 40577 1 NFIQYFHK Unmodified 1095.5502 0.55016488 2624 Q8QZY1;A0A2R8VH97 Eif3l Eukaryotic translation initiation factor 3 subunit L yes no 0 0 0 0 11 0 1 62.878 62.878 3 0.0031768 16911 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.241 56.122 0 0 0 0 140.11 153.77 0 0 0 0 139 148 0 0 0 0 1 1 17052 15010 2624 14434 34941 40578 40578 1 NFITAEELR Unmodified 1091.5611 0.56112349 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 5.5 0.5 1 1 58.825 58.825 2 0.017908 19556 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.92 32.112 0 57.992 155.81 43.247 72.083 156.78 0 56 149 46 74 149 0 1 2 1 1 2 12032 15011 310 14435 34942;34943 40579;40580 40580 2 NFITQGPYENR Unmodified 1337.6364 0.6364137 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 8.5 2.69 1 1 1 1 52.834 52.834 2 2.5376E-53 15882 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 209.21 159.38 425.43 62.629 400.92 364.37 393.72 259.01 399 65 390 362 400 250 5 1 4 5 4 2 124870 15012 1741 14436 34944;34945;34946;34947 40581;40582;40583;40584;40585 40582 5 NFIVWLEDQK Unmodified 1290.6608 0.66083754 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 10.5 2.5 1 1 86.723 86.723 3 0.00083355 34014 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.655 53.802 0 38.595 46.216 48.096 27.69 68.5 0 37 46 47 28 65 0 1 1 2 1 2 6869.8 15013 2924 14437 34948;34949 40586;40587 40587 2 NFLASQVPFPSR Unmodified 1361.7092 0.70918471 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 68.919 68.919 2;3 3.4657E-05 20007 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.382 54.996 149.06 176.46 105.44 192.58 177.85 59.696 140 176 102 185 176 56 3 3 2 4 2 1 45608 15014 2879 14438 34950;34951;34952;34953 40588;40589;40590;40591 40589 4 NFLEGDWK Unmodified 1007.4712 0.47124585 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 7.5 0.5 1 1 70.059 70.059 2;3 0.0041119 24003 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.677 35.676 108.12 137.33 195.67 146.71 180.17 192.07 102 139 195 148 185 185 1 2 2 2 2 2 12210 15015 533 14439 34954;34955 40592;40593 40592 2 NFLELTELK Unmodified 1105.6019 0.60192568 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 78.974 78.974 2;3 1.9788E-05 27504 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.75 65.301 226.19 191.92 357.68 168.79 258.13 264.45 213 195 343 167 259 251 3 4 3 3 3 2 93882 15016 1151 14440 34956;34957;34958;34959 40594;40595;40596;40597;40598;40599 40595 6 NFLFASSFK Unmodified 1059.5389 0.53893149 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 5.4 5.39 3 2 75.674 75.674 2;3 0.00020942 26121 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 130.66 84.976 108.77 116.39 318.73 302.72 96.068 293.61 102 112 314 296 102 278 1 2 4 4 1 3 136220 15017 3210 14441 34960;34961;34962;34963;34964 40600;40601;40602;40603;40604;40605 40600 6 NFLINYYNR Unmodified 1215.6037 0.60365701 3096 Q9D8U8 Snx5 Sorting nexin-5 yes yes 0 0 0 0 10.5 0.5 1 1 65.205 65.205 2 0.0049235 17731 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.212 51.661 99.426 72.032 60.592 140.26 155.88 85.701 93 74 56 130 158 83 1 1 1 1 2 1 16154 15018 3096 14442 34965;34966 40606;40607 40607 2 NFLYAWCGK Unmodified 1157.5328 0.53280025 16 A0A087WPL5;E9QNN1;O70133;Q3UR42;A0A0R4J2C3 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 11.5 0.5 1 1 73.435 73.435 3 0.0082826 21578 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.598 38.818 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5798.2 15019 16 14443 34967;34968 40608;40609 40608 2 NFLYDIAGCSGNFTVQNR Unmodified 2074.9531 0.95307317 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 10 2.16 1 1 1 77.566 77.566 3 2.7654E-07 26203 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.153 83.685 29.807 46.934 0 29.933 35.678 104.02 28 46 0 28 37 102 1 1 0 1 1 2 10928 15020 1925 14444 34969;34970;34971 40610;40611;40612 40611 3 NFNAGGHK Deamidation (N) 844.38277 0.3827652 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 1 0 0 6 0 1 34.812 34.812 3 0.017368 8165 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.248 35.773 98.758 60.46 122.07 81.721 91.564 57.083 93 65 120 83 93 56 1 1 1 1 1 1 5508 15021 1141 14445 34972 40613 40613 299 1 NFNAGGHK Unmodified 843.39875 0.39874961 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 7.5 1.12 1 1 1 1 31.854 31.854 3 0.00015313 6334 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.25 100.81 295.42 213.37 301.73 590.19 382.12 449.61 278 224 309 563 406 432 1 1 1 2 2 2 40177 15022 1141 14445 34973;34974;34975;34976 40614;40615;40616;40617 40615 4 NFNTQLQQTRQMIR Oxidation (M);Deamidation (N) 1793.8843 0.88426532 2108 Q61087 Lamb3 Laminin subunit beta-3 yes yes 0 1 1 1 13 0 1 67.314 67.314 2 0.0038152 24718 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.278 16.767 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15023 2108 14446 34977 40618 40618 819;820 163 1 NFPDLDR Unmodified 875.41373 0.41373097 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 5 0 1 52.228 52.228 2 0.019894 17027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.29 44.58 0 58.304 76.57 0 97.278 0 0 56 74 0 93 0 0 1 1 0 1 0 8057.9 15024 1868 14447 34978 40619 40619 1 NFPNAIEHTLQWAR Unmodified 1695.8481 0.84813781 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 8 0.816 1 1 1 68.42 68.42 3 7.6232E-17 22565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 127.78 100.32 443.63 156.08 508.91 241.38 249.52 322.69 417 167 491 241 251 306 4 2 4 2 3 2 92122 15025 1876 14448 34979;34980;34981 40620;40621;40622;40623 40622 4 NFRPDDPAR Unmodified 1086.5207 0.52065566 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 13 0 1 33.616 33.616 3 0.0018076 8393 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.838 44.414 304.47 257.44 366.05 0 0 464.78 287 267 354 0 0 436 1 1 1 0 0 1 44453 15026 118;1534 14449 34982 40624 40624 1 NFSAIINPPQACILAIGASEDK Unmodified 2328.1784 0.17838166 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8.67 0.471 1 2 85.442 85.442 3;4 0.00010724 29800 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.593 32.908 0 39.368 19 19.674 0 20.254 0 37 19 18 0 19 0 2 1 2 0 1 11562 15027 2433 14450 34983;34984;34985 40625;40626;40627 40626 3 NFSGAELEGLVR Unmodified 1290.6568 0.65681479 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 67.592 67.592 2;3 1.6491E-08 23586 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.02 59.298 325.96 205.64 268.47 273.61 282.75 416.2 306 213 269 268 296 398 3 3 4 4 5 5 124940 15028 1554 14451 34986;34987;34988;34989;34990 40628;40629;40630;40631;40632 40629 5 NFSVNLYK Unmodified 983.50763 0.50763136 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 9.33 0.471 2 1 63.221 63.221 2;3 0.0043983 17379 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.26 71.698 167.88 101.88 264.46 198.02 106 145.15 158 102 259 194 111 139 2 2 3 2 2 2 20598 15029 2379 14452 34991;34992;34993 40633;40634;40635 40635 3 NFTLDVI Unmodified 820.43307 0.43306943 1167 O08848 Trove2 60 kDa SS-A/Ro ribonucleoprotein yes yes 0 0 0 0 6 0 1 84.778 84.778 2 0.062526 31589 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.268 58.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15030 1167 14453 34994 40636 40636 1 NFTNLFGQPLVCLLSPTAYPK Unmodified 2379.2297 0.22968895 2511 Q8C8N2;A0A0N4SVJ6;A0A0N4SUW0 Scai Protein SCAI yes no 0 0 0 0 5.6 5.64 3 1 1 100.79 100.79 3;4 3.1621E-09 34104 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.631 62.209 46.791 50.948 58.678 33.02 81.229 42.118 44 51 58 33 80 40 4 5 5 4 5 5 9247.1 15031 2511 14454 34995;34996;34997;34998;34999 40637;40638;40639;40640;40641;40642;40643 40639 7 NFTTEQVTAMLLSK Unmodified 1581.8072 0.80724378 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 10 1.87 1 1 1 1 84.417 84.417 2;3 1.3711E-21 29290 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.14 107.73 89.059 20.216 76.635 66.389 181.05 20.254 83 19 75 65 176 19 1 1 2 1 2 1 33053 15032 1957 14455 35000;35001;35002;35003 40644;40645;40646;40647 40645 4 NFVGPPHFK Unmodified 1041.5396 0.53960019 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 10.7 1.7 1 1 1 53.068 53.068 3 0.0012636 14582 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.239 58.732 0 157.47 113.64 224 185.93 115.23 0 148 111 213 185 111 0 2 1 2 2 1 75486 15033 2057 14456 35004;35005;35006 40648;40649;40650 40648 3 NFWELLMNVK Unmodified 1292.6587 0.65872905 2742 Q91VK4 Itm2c Integral membrane protein 2C;CT-BRI3 yes yes 0 0 0 0 12 0 1 96.72 96.72 3 0.00071079 27668 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.763 55.909 12.782 8.5704 8.5979 12.604 0 12.792 12 9 9 12 0 12 1 1 1 1 0 1 1391.1 15034 2742 14457 35007 40651 40651 1 NFYDGPEK Unmodified 968.42396 0.42396131 2928 Q9CQH3;D3Z568;F6Y6V5;D3YX99;D3Z6W9 Ndufb5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 50.361 50.361 2 0.0036433 15610 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.13 75.068 275.64 194.86 215.81 278.18 158.38 271.57 259 204 223 269 167 259 3 3 3 3 2 3 22234 15035 2928 14458 35008;35009;35010;35011 40652;40653;40654;40655 40653 4 NFYGGNGIVGAQVPLGAGIALACK Deamidation (N) 2347.1995 0.19945145 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 1 0 0 10 1.91 3 4 1 1 3 86.419 86.419 3;4;5 1.2245E-22 31370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 123.19 106.51 403.49 367.8 231.88 218.99 292.43 292.89 380 361 224 204 289 278 9 6 6 5 7 4 97053 15036 1520 14459 35012;35013;35014;35015;35016;35017;35018;35019;35020;35021;35022;35023 40656;40657;40658;40659;40660;40661;40662;40663;40664;40665;40666;40667;40668;40669 40658 569;570 14 NFYGGNGIVGAQVPLGAGIALACK Unmodified 2346.2154 0.21543586 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10 0 1 83.606 83.606 4 9.0476E-17 26572 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.543 95.445 56.54 25.416 33.729 28.035 29.703 41.792 53 28 34 28 31 40 1 1 1 1 1 1 4492 15037 1520 14459 35024 40670 40670 1 NFYGGNGIVGAQVPLGAGIALACK 2 Deamidation (N) 2348.1835 0.18346703 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 2 0 0 11 0 1 86.987 86.987 4 0.0049374 27627 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.76 25.454 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 3020.3 15038 1520 14459 35025 40671 40671 569;570 1 NFYQEHPDLAR Unmodified 1388.6473 0.64731274 2135 Q8BTS0;Q61656;S4R1I6;B1ARB9;B1ARC0;S4R1E3 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 6 0 1 44.652 44.652 3 2.7875E-06 12847 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.911 60.468 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15039 2135 14460 35026 40672 40672 1 NGALVDAR Unmodified 814.42972 0.42971539 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5 0 1 35.645 35.645 2 0.025221 9058 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.692 22.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15040 3449;3451;3452 14461 35027 40673 40673 1 NGAWEIVHWEK Unmodified 1367.6622 0.66223452 121 A0A0M3HEP7;P70704;A0A0J9YV34;Q3U9N5 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 8 0 1 65.269 65.269 3 0.05788 21077 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.661 14.869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15041 121 14462 35028 40674 40674 1 NGDGTIDFR Unmodified 993.45157 0.45157304 1737;2392 P62761;Q8BGZ1;F2Z3Z1 Vsnl1;Hpcal4 Visinin-like protein 1;Hippocalcin-like protein 4 no no 0 0 0 0 3 0 1 45.672 45.672 2 0.046795 14602 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.632 9.5653 49.063 0 49.525 0 48.116 0 46 0 46 0 46 0 1 0 1 0 1 0 5407.1 15042 1737;2392 14463 35029 40675 40675 1 NGDGTIDFR Deamidation (N) 994.43559 0.43558863 1737;2392 P62761;Q8BGZ1;F2Z3Z1 Vsnl1;Hpcal4 Visinin-like protein 1;Hippocalcin-like protein 4 no no 0 1 0 0 3 0 1 48.288 48.288 2 0.051897 15872 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.275 39.154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15043 1737;2392 14463 35030 40676 40676 673 1 NGDIDNDTVQK Deamidation (N) 1218.5364 0.53642488 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 1 0 0 2.5 0.5 1 1 45.306 45.306 3 0.0001602 13993 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.103 45.011 78.299 122.1 81.89 116.44 0 108.73 74 121 83 111 0 102 2 2 1 2 0 2 41404 15044 2507 14464 35031;35032 40677;40678 40677 938 2 NGDIDNDTVQK Unmodified 1217.5524 0.5524093 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 3.5 0.5 1 1 42.146 42.146 2 2.7775E-08 13010 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.88 62.529 0 48.01 46.792 27.815 0 29.848 0 47 46 28 0 28 0 2 1 1 0 1 5668.8 15045 2507 14464 35033;35034 40679;40680 40679 2 NGDIDYCELNAR Unmodified 1438.6147 0.61469198 2968 Q9CS84;E0CY11;H3BK93 Nrxn1 Neurexin-1 yes no 0 0 0 0 3 0 1 53.5 53.5 3 0.053207 18165 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.645 10.172 20.346 8.2041 0 20.411 18.936 0 19 9 0 19 19 0 1 1 0 1 1 0 1804.7 15046 2968 14465 35035 40681 40681 1 NGDLDEVK Deamidation (N) 889.40289 0.40289152 1738 P62774 Mtpn Myotrophin yes yes 0 1 0 0 3 0 1 48.755 48.755 3 0.0083939 16103 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.67 27.753 48.891 25.546 56.804 45.102 95.206 0 46 28 56 46 93 0 1 1 1 1 1 0 3418.6 15047 1738 14466 35036 40682 40682 674 1 NGDLDEVK Unmodified 888.41888 0.41887593 1738 P62774 Mtpn Myotrophin yes yes 0 0 0 0 3 0 1 45.151 45.151 3 0.010931 14398 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.04 19.079 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15048 1738 14466 35037 40683 40683 1 NGDLDEVKDYVAK Deamidation (N) 1465.6937 0.69365381 1738 P62774 Mtpn Myotrophin yes yes 0 1 0 1 6.6 3.26 1 2 1 1 65.054 65.054 3;4 0.00023809 23086 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.943 80.212 464.68 417.74 314.35 453.48 473.83 520.55 436 427 306 430 490 501 4 5 3 4 4 4 39736 15049 1738 14467 35038;35039;35040;35041;35042 40684;40685;40686;40687;40688 40685 674 5 NGDLDEVKDYVAK Unmodified 1464.7096 0.70963822 1738 P62774 Mtpn Myotrophin yes yes 0 0 0 1 5.5 0.5 1 1 61.578 61.578 4 0.010038 21475 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.704 34.258 107.11 79.729 145.07 0 46.477 47.71 101 84 139 0 46 46 2 2 2 0 1 1 4995.7 15050 1738 14467 35043;35044 40689;40690 40689 2 NGDTITIK Unmodified 860.46035 0.46034682 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 0 0 0 8.67 3.09 1 1 1 48.596 48.596 2 0.014882 13774 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.615 10.998 0 0 67.783 57.168 0 78.884 0 0 65 56 0 74 0 0 1 1 0 1 3444.5 15051 1352 14468 35045;35046;35047 40691;40692;40693 40692 3 NGEAVPEDEQISAK Deamidation (N) 1486.6787 0.67873203 1481 P28738;A2ARD4 Kif5c Kinesin heavy chain isoform 5C yes no 0 1 0 0 2 0.816 1 1 1 50.894 50.894 3 0.00092537 16590 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.329 43.77 78.824 29.792 97.086 46.248 128.2 164.77 74 28 92 46 130 158 2 1 2 1 3 3 15143 15052 1481 14469 35048;35049;35050 40694;40695;40696 40695 552 3 NGESSELDLQGIR Deamidation (N) 1417.6685 0.66850169 323 A0A1W2P729;Q9QXT0 Cnpy2 Protein canopy homolog 2 yes no 0 1 0 0 2 0 1 58.475 58.475 3 0.018092 20069 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 49.298 26.765 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 1226.6 15053 323 14470 35051 40697 40697 89 1 NGETELCMEGR Deamidation (N) 1295.5122 0.51220074 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 1 0 0 1 0 1 46.559 46.559 2 0.038197 13749 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.884 51.927 0 39.368 0 20.767 0 39.442 0 37 0 19 0 37 0 1 0 1 0 1 4717.8 15054 2420 14471 35052 40698 40698 926 1 NGEVQNLAVK Deamidation (N) 1071.556 0.55603812 2264 Q6ZQ38;D3YWC5 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes no 0 1 0 0 4 0 1 53.141 53.141 3 0.010549 17762 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.434 35.642 0 28.989 48.033 0 0 29.848 0 28 46 0 0 28 0 1 1 0 0 1 2723.9 15055 2264 14472 35053 40699 40699 895 1 NGFDQCDYGWLSDASVR Deamidation (N) 1989.8163 0.81630491 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059;Q8BS97 Vcan Versican core protein yes no 0 1 0 0 4 0 1 75.945 75.945 3 1.3115E-05 28082 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.21 65.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5243.4 15056 851 14473 35054 40700 40700 226 1 NGFLNLALPFFGFSEPLAAPR Unmodified 2277.1946 0.19462407 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 9.5 4.92 1 2 1 108.72 108.72 3;4 1.4645E-11 34795 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.156 63.156 8.5538 0 34.876 11.651 18.341 8.4225 8 0 33 11 18 8 2 0 4 2 3 1 13776 15057 1876 14474 35055;35056;35057;35058 40701;40702;40703;40704;40705;40706 40702 6 NGFLNLALPFFGFSEPLAAPR Deamidation (N) 2278.1786 0.17863965 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 0 11.2 0.968 2 3 2 1 112.56 112.56 3;4 5.6292E-11 34536 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.379 80.437 23.451 18.313 17.728 12.992 18.587 19.188 22 18 17 13 18 18 5 4 3 3 3 2 41347 15058 1876 14474 35059;35060;35061;35062;35063;35064;35065;35066 40707;40708;40709;40710;40711;40712;40713;40714;40715;40716 40709 763 10 NGGHEADAQILELNQQLLDLK Deamidation (N) 2319.1707 0.17065374 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 1 0 0 5.2 0.748 1 2 2 82.347 82.347 3;4 3.2385E-11 30027 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.665 66.896 148.14 103.89 124.77 47.982 166.62 135.74 140 102 122 47 162 130 5 4 5 2 4 4 18791 15059 2243 14475 35067;35068;35069;35070;35071 40717;40718;40719;40720;40721;40722;40723 40722 889 7 NGGNQEVEIAHCHK Deamidation (N) 1592.7002 0.70015294 68 A0A0A6YX73;Q8K1M3;P12367 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 1 0 0 3 0 1 35.696 35.696 4 0.0066156 10098 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.897 38.129 39.701 0 0 29.927 36.008 38.414 37 0 0 28 37 37 1 0 0 1 1 1 2875.6 15060 68 14476 35072 40724 40724 22 1 NGGQHAIDDFESK Deamidation (N) 1417.611 0.61098681 885 P0C7L0;E9Q2D0 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 1 0 0 3 0 1 48.74 48.74 3 0.0036632 16053 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.401 40.391 29.589 47.407 36.243 17.894 37.88 0 28 47 37 19 37 0 1 1 1 1 1 0 2782.3 15061 885 14477 35073 40725 40725 241 1 NGGSPALNNNPR 2 Deamidation (N) 1211.5531 0.553078 2835 Q99JY8 Ppap2b Lipid phosphate phosphohydrolase 3 yes yes 0 2 0 0 2 0 2 34.653 34.653 2 0.0068779 9498 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.377 57.853 29.952 18.196 8.8523 40.51 26.409 29.635 28 19 9 38 28 28 1 1 1 2 2 1 2397.1 15062 2835 14478 35074;35075 40726;40727 40727 1004;1005 2 NGGSPALNNNPR Deamidation (N) 1210.5691 0.56906242 2835 Q99JY8 Ppap2b Lipid phosphate phosphohydrolase 3 yes yes 0 1 0 0 4 0 1 32.353 32.353 2 0.0093809 7923 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.045 54.646 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 2876.2 15063 2835 14478 35076 40728 40728 1004;1005 1 NGITEENLNK Deamidation (N) 1131.5408 0.54078198 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 1 0 0 5 3.42 4 1 1 1 49.184 49.184 2;3 1.5073E-05 16259 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.973 53.367 467.41 391.02 279.6 318.29 613 455.3 439 399 286 317 611 441 4 3 2 4 3 3 63825 15064 1160 14479 35077;35078;35079;35080;35081;35082;35083 40729;40730;40731;40732;40733;40734;40735 40732 316;317 7 NGITEENLNK Unmodified 1130.5568 0.5567664 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 46.752 46.752 2;3 9.1116E-15 14396 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.29 100.26 238.04 82.029 138.29 134.29 34.391 136.53 223 92 139 131 37 129 3 2 3 3 1 2 20266 15065 1160 14479 35084;35085;35086;35087 40736;40737;40738;40739 40739 4 NGITPLHVASK Deamidation (N) 1136.619 0.61897272 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 1 0 0 7 0 1 51.025 51.025 3 0.0043519 14973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.088 39.209 78.183 61.332 152.93 70.372 74.171 0 74 65 148 74 74 0 1 1 1 1 1 0 7435 15066 3449;3451;3452 14480 35088 40740 40740 1160 1 NGKDQDAEQAPEYR Deamidation (N) 1620.7016 0.70159273 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 1 0 1 5.57 4.78 1 1 2 1 2 37.225 37.225 3 9.8778E-05 10967 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.2 82.661 950.28 761.59 684.47 488.71 1057.7 1145.7 893 780 695 494 1065 1100 8 5 5 5 7 6 114060 15067 2014 14481 35089;35090;35091;35092;35093;35094;35095 40741;40742;40743;40744;40745;40746;40747;40748 40745 799 8 NGKDQDAEQAPEYR Unmodified 1619.7176 0.71757715 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 1 4 0 1 35.179 35.179 3 2.2364E-16 9257 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.22 106.03 39.263 30.602 47.738 0 48.116 0 37 32 46 0 46 0 1 1 1 0 1 0 5094.8 15068 2014 14481 35096 40749 40749 1 NGLDVLLK Unmodified 870.51747 0.51746776 2957 Q9CR62 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 0 0 0 0 8 0 1 68.909 68.909 2 0.032795 22820 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.563 8.3576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15069 2957 14482 35097 40750 40750 1 NGLTLIELWEGLTVDDIK Deamidation (N) 2029.0619 0.06193814 3028 Q9D0K2 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 1 0 0 13 0 1 117.39 117.39 3 2.7936E-06 45109 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.239 45.55 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 798.45 15070 3028 14483 35098 40751 40751 1057 1 NGLTLIELWEGLTVDDIKK Deamidation (N) 2157.1569 0.15690116 3028 Q9D0K2 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 1 0 1 7.5 0.5 1 1 106.01 106.01 4 1.708E-07 36589 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.493 70.335 0 16.719 18.219 5.688 19.046 16.513 0 16 18 6 19 16 0 2 2 1 2 2 3799.3 15071 3028 14484 35099;35100 40752;40753 40753 1057 2 NGLTLIELWEGLTVDDIKK Unmodified 2156.1729 0.17288557 3028 Q9D0K2 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial yes yes 0 0 0 1 8 0 1 98.988 98.988 4 0.035661 35376 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.111 16.651 0 9.256 19.144 19.275 18.677 9.061 0 9 19 19 19 9 0 1 1 1 1 1 747.95 15072 3028 14484 35101 40754 40754 1 NGLTPLHVAAHYDNQK Deamidation (N) 1777.8747 0.87474649 3449;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2T7 Ank2 Ankyrin-2 no no 0 1 0 0 5 0 1 52.598 52.598 4 0.0074064 17178 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.084 25.344 0 77.801 55.924 0 57.278 37.808 0 74 56 0 56 37 0 1 1 0 1 1 2148.9 15073 3449;3452 14485 35102 40755 40755 1161 1 NGPALQEAYVR Deamidation (N) 1217.6041 0.60405094 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 1 0 0 4 0 1 51.231 51.231 3 0.0088954 16843 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.676 37.229 48.999 0 60.345 0 38.702 0 46 0 56 0 37 0 1 0 1 0 1 0 3508.3 15074 2154 14486 35103 40756 40756 847 1 NGPFKPNYYR Unmodified 1254.6146 0.61455605 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 1 10 0.816 1 1 1 44.485 44.485 3 3.5518E-05 9405 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.88 85.656 227.73 51.335 234.88 63.559 99.477 417.17 213 56 223 65 102 394 2 1 2 1 1 3 64260 15075 2298;1040 14487 35104;35105;35106 40757;40758;40759 40759 3 NGPVEGAFTVFSDFLTYK Unmodified 1990.9676 0.96764382 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 0 10 1.63 1 2 1 1 1 103.05 103.05 3;4 3.3887E-26 36485 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.28 111.48 29.952 53.05 82.649 70.603 40.836 9.2449 28 52 79 69 40 9 1 3 4 4 3 1 19836 15076 1344 14488 35107;35108;35109;35110;35111;35112 40760;40761;40762;40763;40764;40765;40766;40767 40762 8 NGPVEGAFTVFSDFLTYK Deamidation (N) 1991.9517 0.95165941 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 1 0 0 8.5 0.5 1 1 108.57 108.57 3 7.026E-13 36858 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.65 96.296 12.832 8.7107 0 9.837 0 0 12 9 0 9 0 0 1 1 0 1 0 0 3105.2 15077 1344 14488 35113;35114 40768;40769 40768 417 2 NGQDLGVAFK Unmodified 1047.5349 0.53490874 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 8.25 2.77 1 2 1 57.587 57.587 2;3 0.0042268 18238 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.096 39.486 138.43 156.96 44.845 119.13 32.669 246.38 130 157 46 112 37 232 3 3 1 2 1 3 15012 15078 2714 14489 35115;35116;35117;35118 40770;40771;40772;40773 40772 4 NGQDLGVAFK Deamidation (N) 1048.5189 0.51892433 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 1 0 0 6 0 1 62.572 62.572 3 0.022323 21262 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.314 29.195 0 48.21 43.892 67.068 72.344 57.632 0 46 46 65 74 56 0 1 1 1 1 1 6904.9 15079 2714 14489 35119 40774 40774 976 1 NGQLIQLPVAEIVVGDIAQIK Deamidation (N) 2218.2573 0.2572839 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 1 0 0 9 2.83 2 1 107.16 107.16 3;4 7.8113E-11 37473 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.967 64.685 24.62 11.289 7.7361 4.9664 38.998 15.199 23 11 8 5 38 15 2 2 2 1 3 2 2030 15080 928 14490 35120;35121;35122 40775;40776;40777 40775 252 3 NGQLLQVPVAALVVGDIAQVK Unmodified 2131.2365 0.23648888 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 9.33 0.471 2 1 97.074 97.074 3;4 5.2666E-11 34770 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.725 74.845 9.5993 9.314 25.361 0 22.711 39.212 9 9 24 0 23 37 1 1 2 0 2 1 3324.6 15081 487 14491 35123;35124;35125 40778;40779;40780 40778 3 NGQLLQVPVAALVVGDIAQVK Deamidation (N) 2132.2205 0.22050447 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 1 0 0 9 0 1 102.14 102.14 3 1.7735E-10 36230 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.49 71.184 0 19.729 29.112 0 19.874 0 0 19 28 0 19 0 0 1 1 0 1 0 3562.8 15082 487 14491 35126 40781 40781 121 1 NGQVELHEFLQLMSAVQK Unmodified 2070.0568 0.056809958 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9.5 0.5 1 1 88.388 88.388 4 5.4708E-05 31165 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.167 42.092 20.129 18.394 27.801 47.947 0 20.254 19 19 28 47 0 19 1 1 1 2 0 1 4427.6 15083 2179 14492 35127;35128 40782;40783 40782 2 NGSEADIDESLYSR Deamidation (N) 1555.6638 0.66381024 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 1 0 0 3.14 4.05 3 3 1 54.271 54.271 2;3 4.7507E-67 16590 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 210.64 172.55 159.71 187.88 173.78 186.87 195.58 158.12 151 186 170 176 194 152 5 5 4 5 4 5 149930 15084 1876 14493 35129;35130;35131;35132;35133;35134;35135 40784;40785;40786;40787;40788;40789;40790;40791;40792 40785 764 9 NGSEADIDESLYSR Unmodified 1554.6798 0.67979466 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 2.67 0.471 1 2 51.315 51.315 2;3 2.5993E-21 16788 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.33 104.78 59.9 37.355 30.296 30.604 0 59.696 56 37 28 28 0 56 2 1 1 1 0 2 9829.6 15085 1876 14493 35136;35137;35138 40793;40794;40795 40793 3 NGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDR Unmodified 4110.062 0.0619615 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 7 0 1 96.107 96.107 4 0.0046014 35390 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 25.336 17.205 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2154.4 15086 1741 14494 35139 40796 40796 1 NGVELTATR Deamidation (N) 960.48762 0.4876242 1841 P97300;H3BIX4;Z4YLB7;A0A0A0MQN8 Nptn Neuroplastin yes no 0 1 0 0 6.67 4.5 1 1 1 43.597 43.597 2 0.00019075 13306 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 150.81 76.555 737.43 454.23 469.1 156.66 794.76 679.56 692 467 453 158 789 654 3 2 2 1 3 2 147660 15087 1841 14495 35140;35141;35142 40797;40798;40799 40798 746 3 NGVELTATR Unmodified 959.50361 0.50360861 1841 P97300;H3BIX4;Z4YLB7;A0A0A0MQN8 Nptn Neuroplastin yes no 0 0 0 0 5.5 0.5 1 1 39.79 39.79 2 0.0088464 10602 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.85 44.722 117.93 146.7 168.76 56.917 178.82 77.363 111 148 167 56 176 74 1 2 2 1 2 1 20593 15088 1841 14495 35143;35144 40800;40801 40801 2 NGVLEEAIIATILK Deamidation (N) 1483.8498 0.84976052 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 1 0 0 9.33 2.62 1 1 1 106.17 106.17 3 8.813E-05 37406 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.985 39.767 0 25.475 3.6712 16.066 5.8491 4.0971 0 24 4 15 6 4 0 2 1 2 1 1 1816.1 15089 3386 14496 35145;35146;35147 40802;40803;40804 40802 1140 3 NGVLEEAIIATILK Unmodified 1482.8657 0.86574494 3386 Q9Z1W9 Stk39 STE20/SPS1-related proline-alanine-rich protein kinase yes yes 0 0 0 0 8 0 1 99.474 99.474 3 0.00064792 35469 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.394 44.287 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 949.1 15090 3386 14496 35148 40805 40805 1 NGWSYDVEEK Unmodified 1225.5251 0.52513192 976 Q9CXZ1;E9QPX3 Ndufs4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 0 5 0 1 56.908 56.908 3 0.0034476 19269 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.435 37.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15091 976 14497 35149 40806 40806 1 NGYDCECLGGGR Deamidation (N) 1357.5027 0.50269869 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 1 0 0 2 0 1 43.105 43.105 2 0.026224 13194 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.548 57.188 20.216 0 28.712 33.265 0 29.848 19 0 28 32 0 28 1 0 1 1 0 1 6139.3 15092 3101 14498 35150 40807 40807 1073 1 NGYTPLHIAAK Unmodified 1183.635 0.63495714 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank3;Ank2 Ankyrin-3;Ankyrin-2 no no 0 0 0 0 9 0 1 49.377 49.377 3 0.0029415 12807 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.511 36.88 0 106.68 110.39 74.303 0 0 0 102 111 74 0 0 0 1 1 1 0 0 4119.2 15093 3450;3449;3451;3452 14499 35151 40808 40808 1 NHALQQQLTQLTEK Unmodified 1650.8689 0.86893283 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 8 0 1 57.465 57.465 3 0.0072914 17396 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.33 24.377 30.044 0 0 49.256 54.316 58.146 28 0 0 46 56 56 1 0 0 1 1 1 2418 15094 2424 14500 35152 40809 40809 1 NHEAQIQDMR Unmodified 1240.5619 0.56186855 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3 0 1 31.053 31.053 3 0.0018884 7866 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.08 48.768 39.53 0 28.81 28.887 0 0 37 0 28 28 0 0 1 0 1 1 0 0 2655.5 15095 1974 14501 35153 40810 40810 1 NHEEEMK Unmodified 915.37563 0.37563091 659 CON__P13645;CON__A2A4G1;CON__P08730-1;B1AQ77;CON__Q7Z3Y8;Q61414;CON__Q7Z3Y7;P08730;CON__P19012;A1L317;A6BLY7 Krt15;Krt13;Krt24;Krt28 Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 13;Keratin, type I cytoskeletal 24;Keratin, type I cytoskeletal 28 no no 0 0 0 0 2 0 1 29.114 29.114 3 0.0068251 6670 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.452 59.623 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 1700.6 + 15096 659 14502 35154 40811 40811 1 NHEEEVNTLR Unmodified 1239.5844 0.58437813 649 CON__O76011;CON__Q8IUT8;CON__Q9D646;CON__A2A5Y0;Q9D646;Q61765 Krt34;Krt31 Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha1 yes no 0 0 0 0 2 0 1 29.786 29.786 3 0.00031049 6970 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 89.9 45.147 39.58 0 20.358 0 36.028 77.856 37 0 19 0 37 74 1 0 1 0 1 1 6646.5 + 15097 649 14503 35155 40812 40812 1 NHEQLEGNER Unmodified 1224.5483 0.54832698 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 7.5 5.5 1 1 22.052 22.052 3 0.00087129 3786 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.136 62.764 0 38.968 32.932 90.386 0 49.036 0 37 37 84 0 46 0 1 2 1 0 1 4752.8 15098 565 14504 35156;35157 40813;40814 40813 2 NHGIAGLYK Deamidation (N) 972.50288 0.50288033 3075 Q9D6M3;E9PY45;E9PV90;A0A0J9YTY6 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 1 0 0 7 0 1 50.154 50.154 3 0.0074668 14562 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.305 32.185 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15099 3075 14505 35158 40815 40815 1070 1 NHGIAGLYK Unmodified 971.51886 0.51886475 3075 Q9D6M3;E9PY45;E9PV90;A0A0J9YTY6 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 9 0 1 44.5 44.5 3 0.0021524 10673 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.173 42.869 221.79 285.58 352.61 321.64 377.64 391.11 210 288 356 320 388 377 1 1 1 1 1 1 39178 15100 3075 14505 35159 40816 40816 1 NHGISTAHK Unmodified 963.48863 0.48862725 2036 Q561M1 Acp1 yes yes 0 0 0 0 7 0.816 1 1 1 25.343 25.343 4 0.0032704 4310 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.27 45.369 150.87 107.24 161.34 102.86 164.24 126.43 142 109 160 102 164 123 3 2 3 2 2 2 6651.7 15101 2036 14506 35160;35161;35162 40817;40818;40819 40817 3 NHGMVALGDTVEEAFYK Unmodified 1879.8774 0.87744861 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 6 0 1 71.639 71.639 3 5.9565E-06 25532 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.8 73.866 49.225 26.473 0 0 47.137 28.503 46 28 0 0 46 28 1 1 0 0 1 1 4727.7 15102 3275 14507 35163 40820 40820 1 NHGVVMPDANKENTLNQLVGAAFGAAGQR Unmodified 2978.4781 0.47808593 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 1 9 0 1 75.632 75.632 4 4.1897E-12 25247 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.732 45.461 0 97.096 111.03 72.872 74.057 0 0 93 111 74 74 0 0 2 2 2 2 0 6749.1 15103 3170 14508 35164 40821;40822 40822 2 NHNDLNSVPQEPYR Unmodified 1681.7808 0.78084611 1821 P70699;F6R5R5 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 3 0 1 39.848 39.848 3 0.00023343 11981 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.045 44.11 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2680.1 15104 1821 14509 35165 40823 40823 1 NHPDSELESTANR Unmodified 1468.6542 0.65424861 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 1 0 1 30.524 30.524 3 2.3956E-05 7024 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.43 88 0 29.478 18.789 0 38.702 0 0 28 19 0 37 0 0 1 1 0 1 0 3145.1 15105 1386 14510 35166 40824 40824 1 NHQSVAEYNIFEGMELR Deamidation (N) 2036.9262 0.92618971 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 1 0 0 6 0 1 67.595 67.595 3 1.2634E-05 23635 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.143 78.047 29.807 0 39.884 0 27.631 48.248 28 0 37 0 28 46 1 0 1 0 1 1 2127 15106 836 14511 35167 40825 40825 219 1 NHSLEEEFER Deamidation (N) 1289.5524 0.5524093 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 1 0 0 1 0 1 45.813 45.813 3 0.035609 13439 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.286 32.155 29.865 0 30.145 0 48.116 0 28 0 28 0 46 0 1 0 1 0 1 0 1249.4 15107 721 14512 35168 40826 40826 201 1 NHVSQAIYLLANR Unmodified 1497.8052 0.80521036 1916 Q3TDK6;A0A0J9YUG1 Rogdi Protein rogdi homolog yes no 0 0 0 0 11 0 1 57.178 57.178 3 0.00011315 14512 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.552 68.994 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 6908.4 15108 1916 14513 35169 40827 40827 1 NHVVDISDSGLITIAGGK Unmodified 1794.9476 0.94757708 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 7.33 0.471 2 1 67.871 67.871 3;4 2.3382E-07 22972 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.404 58.083 98.09 36.268 74.497 65.098 80.135 107.51 92 37 74 65 83 103 2 1 2 2 2 2 8272.7 15109 2179 14514 35170;35171;35172 40828;40829;40830 40828 3 NHYIPLVGIK Unmodified 1152.6655 0.66552898 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 10 0 1 58.992 58.992 3 0.017046 15578 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.44 30.304 137.86 126.24 166.76 127.21 262.47 228.1 130 130 167 130 264 221 1 1 1 1 1 1 7897.7 15110 179 14515 35173 40831 40831 1 NIACSGK Unmodified 748.35377 0.35377325 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 8 1 1 1 36.681 36.681 2 0.03134 7437 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.212 31.746 39.701 0 64.92 39.943 26.454 78.129 37 0 60 37 28 74 1 0 1 1 1 2 25868 15111 2555 14516 35174;35175 40832;40833 40833 2 NIAFFSTNCVEGTAR Unmodified 1685.7832 0.78315429 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 8.6 4.22 1 1 1 1 1 66.08 66.08 3 1.2597E-05 23959 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.081 64.653 193.55 103.19 74.451 324.83 275.89 298.74 181 102 74 306 282 287 3 2 1 5 4 4 49760 15112 2699 14517 35176;35177;35178;35179;35180 40834;40835;40836;40837;40838 40838 5 NIANPTAMLLSATNMLR Unmodified 1829.9492 0.94917376 2734 Q91VA7;V9GXV0 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes no 0 0 0 0 8.71 4.92 2 2 2 1 92.193 92.193 2;3 4.9365E-06 33082 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.802 56.112 61.211 97.365 36.977 125.63 63.829 49.761 58 94 35 118 64 47 5 5 3 8 4 4 80223 15113 2734 14518 35181;35182;35183;35184;35185;35186;35187 40839;40840;40841;40842;40843;40844;40845;40846;40847;40848;40849 40841 11 NIANPTATLLASCMMLDHLK Unmodified 2213.1007 0.10066538 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 11 0 1 83.842 83.842 3 0.00016025 26153 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.956 35.364 0 19.914 18.055 29.376 8.0646 0 0 19 19 28 9 0 0 1 1 1 1 0 4040.3 15114 1814 14519 35188 40850 40850 1 NIASVGFHEDGR Unmodified 1300.616 0.61601261 3144 Q9DCJ1 Mlst8 Target of rapamycin complex subunit LST8 yes yes 0 0 0 0 6 0 1 45.374 45.374 3 0.032001 13234 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.025 23.084 48.732 44.531 67.413 0 65.015 86.623 46 46 65 0 65 83 1 1 1 0 1 1 2279.8 15115 3144 14520 35189 40851 40851 1 NIATSGK Unmodified 689.3708 0.37080353 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 8 0 1 36.694 36.694 2 0.03501 7742 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.279 33.775 0 38.444 55.267 67.751 0 59.696 0 37 56 65 0 56 0 1 1 1 0 1 6020.9 15116 3331 14521 35190 40852 40852 1 NIATYEEQLVALFGTNMDIVEPTA Unmodified 2638.2836 0.28363459 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 13 0 1 115.75 115.75 3 6.3151E-08 44955 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.238 30.761 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15117 1495 14522 35191 40853 40853 1 NIATYYGAFIK Unmodified 1259.655 0.65502388 1081;615 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F8VPL5;E9PVG7;A0A0A6YW53;A0A0A6YWM8;A0A0A6YWR8;B2RUE8;B7ZNR9;P97820;A0A0A6YVZ8;E0CYV5;E0CZF8;E0CZD7;E0CXD6;E0CY98;E9PUL9;B9EKN8;B2RQ80;P83510 Mink1;Map4k4;Tnik Misshapen-like kinase 1;Mitogen-activated protein kinase kinase kinase kinase 4;Traf2 and NCK-interacting protein kinase no no 0 0 0 0 11 0.816 1 1 1 74.455 74.455 2 4.6939E-31 22541 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 152.07 72.758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15118 1081;615 14523 35192;35193;35194 40854;40855;40856 40854 3 NICFFSTNCVEGTAR Unmodified 1774.7767 0.77668871 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 7.5 4.03 1 1 1 1 65.793 65.793 2;3 1.4123E-05 22164 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.411 51.112 118.54 150.54 0 139.73 125.25 155.26 111 149 0 130 130 149 2 3 0 2 2 3 16028 15119 2253 14524 35195;35196;35197;35198 40857;40858;40859;40860 40857 4 NICFTVWDVGGQDK Unmodified 1637.7508 0.75079153 1834;1700 P84084;P61750;E9Q798 Arf5;Arf4 ADP-ribosylation factor 5;ADP-ribosylation factor 4 no no 0 0 0 0 8 0 1 77.658 77.658 3 5.147E-08 26970 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.69 76.18 39.022 55.836 66.783 0 84.521 66.878 37 56 65 0 83 65 1 1 1 0 1 1 7866.4 15120 1834;1700 14525 35199 40861 40861 1 NICQFLIEIGLAK Unmodified 1517.8276 0.82758529 1576 P48024 Eif1 Eukaryotic translation initiation factor 1 yes yes 0 0 0 0 12 0 1 99.329 99.329 3 9.5149E-05 28299 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.365 54.306 7.3861 8.8523 13.498 0 0 0 7 9 13 0 0 0 1 1 1 0 0 0 1811.6 15121 1576 14526 35200 40862 40862 1 NICQFLLEVGIVK Unmodified 1531.8432 0.84323535 2989 Q9CXU9 Eif1b Eukaryotic translation initiation factor 1b yes yes 0 0 0 0 11 0 1 95.828 95.828 3 0.00015245 31217 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.548 56.31 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 1942.7 15122 2989 14527 35201 40863 40863 1 NIDEDELLGK Unmodified 1144.5612 0.56118307 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 0 4 0.816 1 1 1 63.855 63.855 2 1.19E-07 22680 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 141.95 48.856 60.088 0 0 0 46.477 186.71 56 0 0 0 46 185 1 0 0 0 1 2 18153 15123 3232 14528 35202;35203;35204 40864;40865;40866;40867 40866 4 NIDEHANEDVER Unmodified 1439.6277 0.62769951 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 13 0 1 32.697 32.697 3 3.0187E-05 7857 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.689 76.336 128.16 69.401 41.469 78.41 0 0 120 74 46 74 0 0 1 1 1 1 0 0 22983 15124 1684 14529 35205 40868 40868 1 NIDNPAIADIYTEHAHQVVVAK Unmodified 2417.2339 0.2339227 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 61.796 61.796 4 4.3417E-15 20941 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.181 61.96 227 149.72 360.75 294.31 276.2 391.87 213 148 352 287 278 375 4 2 4 4 2 4 91840 15125 1263 14530 35206;35207;35208;35209 40869;40870;40871;40872;40873 40870 5 NIDSNPYDTDK Unmodified 1280.5521 0.55207495 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 48.33 48.33 2;3 1.067E-08 15189 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.32 87.186 495.78 309.64 692.07 486.3 463.67 792.43 466 321 676 485 482 755 2 3 5 4 4 5 171020 15126 1554 14531 35210;35211;35212;35213;35214;35215 40874;40875;40876;40877;40878;40879;40880 40878 7 NIEDVIAQGVGK Unmodified 1241.6616 0.66156582 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 71.464 71.464 3 1.6742E-12 26617 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.42 93.617 247.36 450.49 122.83 330.15 259.32 311.54 233 441 121 308 259 297 3 4 2 3 3 3 87554 15127 1865 14532 35216;35217;35218;35219 40881;40882;40883;40884 40884 4 NIEEHASSDVER Unmodified 1384.6219 0.62188585 1685 P61028 Rab8b Ras-related protein Rab-8B yes yes 0 0 0 0 1.5 0.5 1 1 32.15 32.15 3 3.475E-15 8139 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 136.93 113.71 0 38.773 35.607 47.158 53.057 143.62 0 37 37 46 56 139 0 1 1 1 1 2 23761 15128 1685 14533 35220;35221 40885;40886 40886 2 NIEEVYVGGK Unmodified 1106.5608 0.56078914 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 7.25 3.34 2 1 1 57.407 57.407 2;3 2.0702E-08 19665 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.11 90.557 524.33 353.25 303.6 253.93 357.59 389.55 492 370 296 241 356 375 5 5 3 3 4 5 36549 15129 3307 14534 35222;35223;35224;35225 40887;40888;40889;40890;40891;40892 40892 6 NIEGIDK Unmodified 787.40758 0.40758296 1995 Q3UM45;A0A087WRA7 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes no 0 0 0 0 5.33 0.471 2 1 49.11 49.11 2;3 0.01087 15596 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.109 22.393 198.22 308.6 216.19 384.6 483.79 292.14 186 306 232 371 489 287 2 3 2 2 3 3 21766 15130 1995 14535 35226;35227;35228 40893;40894;40895 40894 3 NIELICQENEGENDPVLQR Unmodified 2269.0645 0.06447411 2115 Q61166 Mapre1 Microtubule-associated protein RP/EB family member 1 yes yes 0 0 0 0 3.5 0.5 1 1 65.344 65.344 3 2.6786E-07 23254 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.319 60.439 30.044 0 0 19 29.288 0 28 0 0 19 28 0 1 0 0 1 1 0 11526 15131 2115 14536 35229;35230 40896;40897 40897 2 NIEYAASVLEAVYIDETR Unmodified 2055.0161 0.01605058 2451 Q8BRR9;Q61481;F6X0V1 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 6 0 1 96.999 96.999 3 0.0037604 36538 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.309 30.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15132 2451 14537 35231 40898 40898 1 NIFDFNALK Unmodified 1080.5604 0.56039521 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 10.2 0.829 1 1 2 79.316 79.316 2;3 3.161E-05 27067 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.75 0 186.92 62.666 270.83 133.73 256.36 194.92 176 65 259 130 259 185 2 1 2 2 3 2 63461 15133 3022 14538 35232;35233;35234;35235 40899;40900;40901;40902;40903 40899 5 NIFIECTGTDFTK Unmodified 1544.7181 0.71809442 3329 Q9WUA2;A0A087WPV4 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 7 0 1 71.711 71.711 3 0.019432 24646 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.621 20.668 39.181 35.773 57.036 27.205 0 49.036 37 37 56 28 0 46 1 1 1 1 0 1 4938.2 15134 3329 14539 35236 40904 40904 1 NIFLQYASTEVDGEHYMTPEDFVQR Unmodified 2988.36 0.35998743 2396 Q8BH59;V9GXX9 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 0 6 0 1 83.505 83.505 4 0.0011605 31097 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.142 32.609 0 20.216 0 0 19.234 18.639 0 19 0 0 19 18 0 1 0 0 1 1 3012.4 15135 2396 14540 35237 40905 40905 1 NIFVLQQNLTNITMSR Unmodified 1890.9986 0.9985668 1192 O35382 Exoc4 Exocyst complex component 4 yes yes 0 0 0 0 1 0 1 83.776 83.776 3 1.2863E-05 29450 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.656 62.015 20.387 0 0 20.424 18.258 19.733 19 0 0 19 19 19 1 0 0 1 1 1 2033 15136 1192 14541 35238 40906 40906 1 NIGAGVMQIAISQDNR Unmodified 1685.8519 0.85190256 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7.5 0.5 1 1 68.856 68.856 3 8.0853E-06 22720 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.151 52.546 78.599 35.787 104.71 94.17 65.82 49.036 74 37 103 93 65 46 2 1 2 2 1 1 7714.6 15137 570 14542 35239;35240 40907;40908 40908 2 NIGNTFFK Unmodified 939.48142 0.48141661 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 9.5 0.5 1 1 62.726 62.726 2 0.0059871 17193 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.87 56.322 439.66 464.75 276.46 585.59 590.64 553.46 413 469 277 561 605 535 2 3 1 3 2 2 46410 15138 2952 14543 35241;35242 40909;40910;40911 40911 3 NIGPLVK Unmodified 739.45922 0.4592246 2736 Q91VD9;A0A087WP77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 10.5 2.5 1 1 54.905 54.905 2 0.033339 18508 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.614 30.931 432.01 255.67 212.08 357.19 327.82 362.68 405 271 217 344 341 349 2 2 1 2 2 2 34487 15139 2736 14544 35243;35244 40912;40913 40913 2 NIHVCLGGLFVPEAYITATR Unmodified 2230.1569 0.15685835 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 81.771 81.771 3 0.023228 25834 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.659 12.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15140 3204 14545 35245 40914 40914 1 NIIADPVTFK Unmodified 1116.6179 0.61791009 2968;889 Q9CS84;E0CY11;H3BK93;E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn1;Nrxn3 Neurexin-1;Neurexin-3 no no 0 0 0 0 8 0 1 68.805 68.805 3 0.0010164 22708 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.143 47.744 29.509 37.469 58.195 0 36.358 68.253 28 38 56 0 37 65 1 1 1 0 1 1 6241 15141 2968;889 14546 35246 40915 40915 1 NIIAEHEIR Unmodified 1093.588 0.58800695 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R2E3;A0A140T8U6 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 7 3.54 1 1 1 1 41.432 41.432 3 0.00012749 11891 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.09 52.528 334.13 9.576 469.64 422.46 562.1 620.36 314 9 453 421 572 597 3 1 3 3 3 4 41136 15142 3447 14547 35247;35248;35249;35250 40916;40917;40918;40919 40917 4 NIIGVIPYFPYSK Unmodified 1509.8232 0.82315184 584 B1AT82;Q9D0M1;B1AT84;B1AT83 Prpsap1 Phosphoribosyl pyrophosphate synthase-associated protein 1 yes no 0 0 0 0 9 4.64 1 1 2 86.4 86.4 3;4 8.5279E-05 24112 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.069 52.38 29.952 146.46 76.196 87.879 115.15 127.07 28 140 74 83 111 121 1 4 2 2 2 4 24831 15143 584 14548 35251;35252;35253;35254 40920;40921;40922;40923;40924;40925 40923 6 NIIGYFEQK Unmodified 1110.571 0.5709599 3046 Q9D1Q6 Erp44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 0 8.67 0.471 1 2 72.672 72.672 2;3 0.00010487 23865 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.35 67.679 20.101 0 158.39 36.882 37.008 99.138 19 0 148 37 37 93 1 0 3 1 1 2 12420 15144 3046 14549 35255;35256;35257 40926;40927;40928 40928 3 NIIHELFLTTLDPK Unmodified 1652.9138 0.91375776 3305 Q9R0X4 Acot9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 0 0 0 0 10 0 1 84.119 84.119 4 0.0024595 26714 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.211 36.953 0 20.073 8.5336 0 0 20.254 0 19 9 0 0 19 0 1 1 0 0 1 2936.6 15145 3305 14550 35258 40929 40929 1 NIIHGSDSVESAEK Unmodified 1484.7107 0.71070086 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 0 4.67 0.471 1 2 43.349 43.349 3;4 7.6644E-05 12676 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.262 52.033 168.94 166.58 46.819 129.34 154.76 172.54 158 168 46 121 158 166 2 3 1 2 2 3 24729 15146 866 14551 35259;35260;35261 40930;40931;40932 40931 3 NIIHGSDSVK Unmodified 1068.5564 0.55637247 1385 P15532;Q5NC80 Nme1 Nucleoside diphosphate kinase A;Nucleoside diphosphate kinase yes no 0 0 0 0 8.67 1.7 1 1 1 39.917 39.917 3 0.00014365 9128 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.767 49.631 256.31 255.51 166.42 230.22 133.05 302.15 241 259 167 222 139 287 3 3 1 2 1 2 62021 15147 1385 14552 35262;35263;35264 40933;40934;40935 40934 3 NIIIALIDR Unmodified 1039.639 0.63897988 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 10.7 1.7 1 1 1 82.407 82.407 2 0.017031 26104 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.704 10.423 139.08 78.594 84 134.31 147.65 28.809 130 84 84 130 148 28 2 3 2 3 3 1 21020 15148 3174 14553 35265;35266;35267 40936;40937;40938 40937 3 NIILEEGK Unmodified 914.5073 0.50729701 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 8.8 3.49 1 1 1 2 56.348 56.348 2;3 0.001186 18472 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.79 39.538 752.85 697.2 876.79 910.55 1052.7 1154.3 708 701 885 899 1073 1111 4 4 5 6 5 6 197340 15149 1410 14554 35268;35269;35270;35271;35272 40939;40940;40941;40942;40943;40944 40941 6 NIILEEGKEILVGDVGQTVDDPYTTFVK Unmodified 3091.5965 0.59651253 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 1 7.2 2.48 4 3 4 2 2 95.749 95.749 4;5 8.0528E-31 37747 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.23 108.29 429.03 523.68 854.81 369.03 475.31 727.9 403 518 834 364 481 693 14 16 19 12 12 19 188630 15150 1410 14555 35273;35274;35275;35276;35277;35278;35279;35280;35281;35282;35283;35284;35285;35286;35287 40945;40946;40947;40948;40949;40950;40951;40952;40953;40954;40955;40956;40957;40958;40959;40960;40961;40962;40963;40964;40965;40966;40967;40968;40969 40969 25 NIILGGVK Unmodified 812.51199 0.51198846 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 10 0.816 1 1 1 60.501 60.501 2 0.0012879 15715 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 141.78 34.124 1231 962.1 1637.8 1152.8 1541.3 1349 1158 1000 1616 1144 1564 1295 2 2 3 3 3 2 242370 15151 1876 14556 35288;35289;35290 40970;40971;40972;40973 40972 4 NIIPFDQMTIDDLNEIFPETK Unmodified 2492.2145 0.21449239 3156 Q9DCX2 Atp5h ATP synthase subunit d, mitochondrial yes yes 0 0 0 0 6.33 0.471 2 1 100.99 100.99 3;4 5.2471E-08 36697 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.765 50.729 0 6.384 6 18.243 17.99 0 0 6 6 17 18 0 0 1 1 2 2 0 5703.9 15152 3156 14557 35291;35292;35293 40974;40975;40976 40976 3 NIKDGVCAQIEK Unmodified 1373.6973 0.6972994 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 1 7 0 1 52.772 52.772 3 0.0011769 15819 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.121 43.722 48.941 0 70.083 0 74.438 86.354 46 0 65 0 74 83 1 0 1 0 1 1 3233 15153 1986 14558 35294 40977 40977 1 NILAVSFAPLVQPSK Unmodified 1582.9083 0.90827845 1662 S4R2K3;P59913 Pcmtd1 Protein-L-isoaspartate O-methyltransferase domain-containing protein 1 yes no 0 0 0 0 12 0 1 85.241 85.241 4 0.0054564 23844 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.184 29.026 29.987 0 9.5868 0 0 0 28 0 9 0 0 0 1 0 1 0 0 0 1859.3 15154 1662 14559 35295 40978 40978 1 NILCFPIK Unmodified 1003.5525 0.55247306 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 12 1 1 1 74.51 74.51 2;3 0.010502 22034 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.2 22.198 79.182 43.605 0 0 0 49.036 74 46 0 0 0 46 1 1 0 0 0 1 8714.9 15155 2054 14560 35296;35297 40979;40980 40979 2 NILCFPIKNENQEVIGVAELVNK Unmodified 2640.3945 0.39452244 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 1 9 0 1 84.891 84.891 4 0.0055437 29546 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.237 24.831 0 39.368 0 49.237 55.343 28.269 0 37 0 46 56 28 0 1 0 1 1 1 2610.6 15156 2054 14561 35298 40981 40981 1 NILFVITKPDVYK Unmodified 1548.8916 0.89156576 1818 Q60817;P70670 Naca Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 1 6.25 5.26 2 1 1 78.216 78.216 3 1.3997E-11 21053 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.07 93.584 71.308 41.881 62.453 108.94 118.89 270.4 67 42 60 104 121 266 2 1 1 2 2 3 65028 15157 1818 14562 35299;35300;35301;35302 40982;40983;40984;40985;40986 40986 5 NILGGTVFR Unmodified 975.55016 0.55016488 1618;1278 P54071;D6RIL6;A0A0U1RP68;O88844;A0A087WPT4;A0A087WRS9;D3YVY3 Idh2;Idh1 Isocitrate dehydrogenase [NADP], mitochondrial;Isocitrate dehydrogenase [NADP] cytoplasmic no no 0 0 0 0 11 0.816 1 1 1 63.16 63.16 2 0.0013441 17537 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.19 55.277 622.99 389.51 282.37 518.54 650.1 295.98 584 410 294 501 654 287 3 3 2 3 3 1 114680 15158 1618;1278 14563 35303;35304;35305 40987;40988;40989;40990 40988 4 NILGGTVFREPIICK Unmodified 1715.9393 0.939261 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 1 10.5 0.5 1 1 70.192 70.192 4 2.6967E-07 20720 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.83 72.734 0 97.776 70.347 86.526 0 78.884 0 93 74 83 0 74 0 1 1 1 0 1 9222 15159 1618 14564 35306;35307 40991;40992 40991 2 NILHSFVQLR Unmodified 1225.6931 0.69314072 863 E9PZ92;Q3TPX4 Exoc5 Exocyst complex component 5 yes no 0 0 0 0 12 0 1 61.069 61.069 3 8.6218E-06 14586 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.02 70.203 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 10850 15160 863 14565 35308 40993 40993 1 NILIDFTK Unmodified 962.54368 0.54368251 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 no no 0 0 0 0 9.83 1.77 2 1 1 1 1 74.934 74.934 2;3 0.00093034 25699 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.51 70.609 1295.1 837.93 1276.2 1201.4 1089.5 1434.7 1217 869 1246 1181 1117 1369 6 5 6 8 7 6 338320 15161 1055 14566 35309;35310;35311;35312;35313;35314 40994;40995;40996;40997;40998;40999;41000;41001;41002 40995 9 NILIDFTKK Unmodified 1090.6386 0.63864553 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 1 10 0 1 68.158 68.158 3 0.012262 19606 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.435 40.565 138.3 97.247 116.93 143.15 96.147 115.58 130 102 120 139 102 111 1 1 1 1 1 1 10797 15162 1055 14567 35315 41003 41003 1 NILMQLYEPNPK Unmodified 1458.7541 0.754086 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 0 9.5 0.5 1 1 75.28 75.28 3 5.6548E-07 22770 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.001 55.773 30.044 0 0 60.532 35.921 0 28 0 0 56 37 0 1 0 0 1 1 0 3789.6 15163 1817 14568 35316;35317 41004;41005 41005 2 NILPDEGEPTDEETTGDISDSMDFVLLNFAEMNK Unmodified 3785.6812 0.68118273 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 13 0 1 108.67 108.67 5 0.056177 44173 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 21.097 12.031 0 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 566.86 15164 3174 14569 35318 41006 41006 1 NILPFDHTR Unmodified 1111.5774 0.57744226 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 9.33 2.62 1 1 1 51.189 51.189 3 0.0028153 16665 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.1 42.985 68.784 92.93 82.796 78.458 93.555 38.145 65 93 84 74 92 37 2 2 2 2 2 1 15539 15165 1512 14570 35319;35320;35321 41007;41008;41009 41009 3 NILQLHDLTTGALLK Unmodified 1648.9512 0.9512059 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 9.67 0.471 1 2 75.526 75.526 3;4 9.6833E-05 22996 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.594 47.061 147.14 25.236 136.13 56.691 74.768 185.48 138 28 130 56 74 176 3 1 2 1 1 3 18519 15166 3259 14571 35322;35323;35324 41010;41011;41012 41012 3 NILTEIYR Unmodified 1020.5604 0.56039521 1556 P46638;G3UZD3 Rab11b Ras-related protein Rab-11B yes no 0 0 0 0 11 2 1 1 65.842 65.842 2 0.015969 23863 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.192 46.237 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15167 1556 14572 35325;35326 41013;41014 41014 2 NILVASPECVK Unmodified 1228.6486 0.64855829 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 7.5 0.5 1 1 60.451 60.451 3 0.00019858 19515 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.548 46.705 138.84 34.677 79.719 0 74.438 86.354 130 37 74 0 74 83 2 1 1 0 2 2 10324 15168 3261 14573 35327;35328 41015;41016 41015 2 NILVFGEDGSGK Unmodified 1234.6194 0.61936665 282 Q6PDL0;A0A1D5RM94 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 0 7.5 0.5 1 1 67.951 67.951 3 2.0145E-05 23079 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.623 68.186 108.58 119.63 43.357 78.298 0 118.33 102 120 46 74 0 111 2 2 1 2 0 2 29549 15169 282 14574 35329;35330 41017;41018 41017 2 NILVNSNLVCK Unmodified 1272.686 0.68600643 1880;1623;1054 Q03137;P54763;G1K381;Q62413 Epha4;Ephb2;Epha6 Ephrin type-A receptor 4;Ephrin type-B receptor 2;Receptor protein-tyrosine kinase;Ephrin type-A receptor 6 no no 0 0 0 0 9.67 0.471 1 2 64.603 64.603 2;3 2.8689E-09 17994 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.89 92.864 137.09 246.24 56.451 130.03 205.2 105.35 129 241 56 121 204 102 2 3 1 2 2 1 19839 15170 1880;1623;1054 14575 35331;35332;35333 41019;41020;41021 41021 3 NILVQESQQFKHNFLLLFMK Deamidation (N) 2477.3141 0.31408728 445 A2ACV6;E1U8D0 Soga1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form yes no 0 1 0 1 8 0 1 95.844 95.844 4 0.00081728 34639 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.387 38.073 30.044 0 0 20.056 37.781 0 28 0 0 19 37 0 1 0 0 1 1 0 985.08 15171 445 14576 35334 41022 41022 115 1 NIMALSDGGK Unmodified 1004.4961 0.4960804 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 8 0 2 58.444 58.444 2;3 0.00016709 17884 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.568 58.844 99.789 0 0 0 0 152.88 93 0 0 0 0 148 1 0 0 0 0 2 10396 15172 1359 14577 35335;35336 41023;41024 41023 2 NINENFGPNTEIHLVPILATAVQEELEK Unmodified 3131.6139 0.61389393 1937 Q3TVK3;Q9Z2W0;Q8BPW9;A0A087WS31;A0A087WSE6 Dnpep Aspartyl aminopeptidase yes no 0 0 0 0 6 0 1 95.309 95.309 4 2.4091E-12 36032 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.779 46.685 0 0 0 9.837 0 14.924 0 0 0 9 0 14 0 0 0 1 0 1 1668.3 15173 1937 14578 35337 41025 41025 1 NINIGDISIK Unmodified 1085.6081 0.60807369 3149 Q9DCR2 Ap3s1 AP-3 complex subunit sigma-1 yes yes 0 0 0 0 8 0 1 70.061 70.061 2 0.0051496 23445 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.228 21.164 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 3318.9 15174 3149 14579 35338 41026 41026 1 NINLIVQK Unmodified 940.57057 0.57056597 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 10.8 1.48 1 1 1 1 61.993 61.993 2 0.00020974 19061 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 157.52 49.858 403.45 693.34 572.97 899.61 640.77 411.4 380 676 577 864 639 389 4 6 4 6 4 3 278740 15175 1203;3123 14580 35339;35340;35341;35342 41027;41028;41029;41030;41031;41032;41033 41028 7 NIPEDAADMAR Unmodified 1201.5397 0.53973612 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 3 0 1 50.177 50.177 2 0.0010446 16738 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.266 60.539 39.471 0 38.574 28.305 0 0 37 0 37 28 0 0 1 0 1 1 0 0 4942.1 15176 2977 14581 35343 41034 41034 1 NIPGITLLNVSK Unmodified 1267.75 0.7499869 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 11.2 1.09 1 2 1 77.172 77.172 2;3 1.1968E-07 23204 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.31 72.013 49.136 128.74 37.238 208.3 138.85 47.775 46 121 37 195 139 46 1 2 1 4 2 1 61385 15177 3093 14582 35344;35345;35346;35347 41035;41036;41037;41038 41036 4 NIPIPTLK Unmodified 894.55385 0.55385327 3232;1590 Q9JKK7;A0A1L1SU70;Q9JHJ0;P49813 Tmod2;Tmod3;Tmod1 Tropomodulin-2;Tropomodulin-3;Tropomodulin-1 no no 0 0 0 0 10 0.816 1 1 1 68.186 68.186 2;3 0.008163 19771 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.56 40.077 306.46 324.05 238.58 267.31 435.25 309.25 288 323 236 260 438 298 3 3 2 2 3 2 75317 15178 3232;1590 14583 35348;35349;35350 41039;41040;41041;41042 41041 4 NIPMLFVR Unmodified 988.55281 0.55280741 1721 P62311 Lsm3 U6 snRNA-associated Sm-like protein LSm3 yes yes 0 0 0 0 11 0 1 72.837 72.837 2 0.030317 21342 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.138 18.429 69.522 44.256 0 0 0 99.138 65 46 0 0 0 93 1 1 0 0 0 1 10849 15179 1721 14584 35351 41043 41043 1 NIQAFAVLQNAFLK Unmodified 1575.8773 0.87731267 278 G3UYW1;A0A1D5RLV7;Q6VNB8 Wdfy3 WD repeat and FYVE domain-containing protein 3 yes no 0 0 0 0 1 0 1 90.893 90.893 3 2.2547E-05 32329 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.073 53.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15180 278 14585 35352 41044 41044 1 NIQDSVPK Unmodified 899.47125 0.47124585 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 5 0 1 46.504 46.504 2 0.01151 14314 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.143 35.332 39.181 35.772 57.082 26.186 54 67.749 37 37 56 28 55 65 1 1 1 1 1 1 2689.7 15181 815;2590 14586 35353 41045 41045 1 NIQFEAFHVFK Unmodified 1378.7034 0.70337105 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 9 0 1 70.756 70.756 3 2.0086E-06 23007 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.184 58.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15182 1888 14587 35354 41046 41046 1 NIQLEDGK Unmodified 915.46616 0.46616048 2633 Q8R0Y6;A0A0N4SW56 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 6 0 1 49.7 49.7 3 0.032742 15212 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.794 14.541 99.111 31.223 87.433 0 0 78.884 93 37 83 0 0 74 1 1 1 0 0 1 3101.6 15183 2633 14588 35355 41047 41047 1 NIQQYNSFVSLSV Unmodified 1497.7464 0.74635808 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 0 8 0 1 82.974 82.974 2 0.010991 29383 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.539 24.73 20.387 0 0 0 29.288 0 19 0 0 0 28 0 1 0 0 0 1 0 2516.8 15184 3119 14589 35356 41048 41048 1 NIQVDEANLLTWQGLIVPDNPPYDK Unmodified 2851.4392 0.43922403 412 A0A338P786;P68037;A0A338P702 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 0 6 0 1 94.322 94.322 4 1.1302E-07 35671 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.735 43.719 20.152 37.886 7.3633 0 0 20.254 19 37 9 0 0 19 1 1 1 0 0 1 3871.3 15185 412 14590 35357 41049 41049 1 NIQVSHQEFSK Unmodified 1315.6521 0.65206377 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 6 0 1 45.437 45.437 3 0.0012809 13182 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.473 57.232 0 58.974 36.496 0 0 69.29 0 56 37 0 0 65 0 1 1 0 0 1 4892.3 15186 3327 14591 35358 41050 41050 1 NISCAAQDPEDLSTFAYITK Unmodified 2243.0416 0.041613403 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;A0A0R4J2A2;S4R2H8;S4R2N9;S4R2E3;A0A140T8U6 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 7.4 2.87 1 2 1 1 78.129 78.129 3;4 4.073E-11 28564 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.98 68.317 129.55 119.95 125.95 47.136 96.106 79.412 122 121 121 47 94 75 5 4 3 3 3 3 28862 15187 3447 14592 35359;35360;35361;35362;35363 41051;41052;41053;41054;41055 41052 5 NISEIIAK Unmodified 886.51238 0.51238239 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 7.5 0.5 1 1 62.118 62.118 2;3 0.006823 19498 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.825 0 68.999 63.31 219.19 160.03 170.8 203 65 65 213 158 176 195 1 1 3 2 2 3 28878 15188 3376 14593 35364;35365 41056;41057;41058 41057 3 NISELFYYAQK Unmodified 1374.682 0.68196691 2372 Q8BG51;Q8JZN7 Rhot1;Rhot2 Mitochondrial Rho GTPase 1;Mitochondrial Rho GTPase 2 yes no 0 0 0 0 10 0 1 79.387 79.387 3 0.0012194 24722 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.199 38.08 0 58.831 45.036 27.076 44.866 58.416 0 56 46 28 46 56 0 1 1 1 1 1 5443.9 15189 2372 14594 35366 41059 41059 1 NISFTVWDVGGQDK Unmodified 1564.7522 0.75217174 1693;1833 P61205;Q8BSL7;P84078 Arf3;Arf2;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1 no no 0 0 0 0 9 2.26 3 2 2 2 77.291 77.291 2;3;4 7.156E-25 27367 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.42 93.344 206.62 402.02 154.17 362.75 401.54 287.1 194 389 148 343 398 277 5 6 3 6 6 6 267990 15190 1693;1833 14595 35367;35368;35369;35370;35371;35372;35373;35374;35375 41060;41061;41062;41063;41064;41065;41066;41067;41068;41069 41062 10 NISHYEEQLVK Unmodified 1358.683 0.68302954 68 A0A0A6YX73;Q8K1M3;P12367 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 5 0 2 52.668 52.668 3;4 0.00047468 17205 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.744 45.736 0 77.796 56.249 76.34 63.242 126.12 0 74 56 74 65 120 0 2 1 2 1 2 13847 15191 68 14596 35376;35377 41070;41071 41070 2 NISNQLSITTK Unmodified 1217.6616 0.66156582 1932 Q3TMH2 Scrn3 Secernin-3 yes yes 0 0 0 0 8 0 1 56.552 56.552 3 0.0020836 16972 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.11 37.505 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15192 1932 14597 35378 41072 41072 1 NITFFSTNCVEGTAR Unmodified 1715.7937 0.79371898 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8.92 3.09 1 2 2 2 1 2 2 65.87 65.87 2;3 3.0695E-29 23820 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 153.81 126.33 362.47 286.19 369.24 513.27 442.14 398.99 342 278 362 491 445 380 6 5 7 8 5 6 317040 15193 106 14598 35379;35380;35381;35382;35383;35384;35385;35386;35387;35388;35389;35390 41073;41074;41075;41076;41077;41078;41079;41080;41081;41082;41083;41084;41085 41084 13 NITFFSTNCVEGTAR Deamidation (N) 1716.7777 0.77773456 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 0 6.75 0.829 2 1 1 68.105 68.105 2;3 6.8568E-07 23841 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.14 82.007 88.707 20.216 59.193 55.398 217.76 47.176 83 19 56 56 213 46 2 1 1 2 4 1 22757 15194 106 14598 35391;35392;35393;35394 41086;41087;41088;41089 41086 39 4 NITLDDASAPR Unmodified 1171.5833 0.5833155 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 5 0 1 49.565 49.565 2 1.0891E-07 15709 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.94 68.543 59.92 0 28.314 37.715 55.214 47.46 56 0 28 37 56 46 1 0 1 1 1 1 4815.8 15195 2566 14599 35395 41090 41090 1 NITLSLVANPSHLEAADPVVMGK Unmodified 2375.2519 0.25188095 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 8 0 1 76.761 76.761 4 0.025523 26505 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 30.592 14.47 48.999 0 60.345 0 114.17 56.438 46 0 56 0 111 56 1 0 1 0 1 1 3515.1 15196 2074 14600 35396 41091 41091 1 NITLSLVANPSHLEAVDPVVQGK Unmodified 2400.3013 0.30127398 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 8 0 1 75.336 75.336 3 0.00025615 25897 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.349 28.735 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 2129.9 15197 628 14601 35397 41092 41092 1 NITYLPAGQSVLLQLPQ Unmodified 1854.0251 0.025099124 1788 P67778 Phb Prohibitin yes yes 0 0 0 0 10 1.87 1 1 1 1 92.311 92.311 2;3 1.9194E-06 36697 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.428 67.619 50.108 95.224 142.09 56.059 84.166 28.503 47 93 139 56 83 28 2 4 4 2 2 1 54953 15198 1788 14602 35398;35399;35400;35401 41093;41094;41095;41096;41097;41098 41097 6 NIVAVGAGFCDGLR Unmodified 1447.7242 0.72418285 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 9 0 1 67.679 67.679 2 0.0028391 21541 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.944 35.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15199 1994 14603 35402 41099 41099 1 NIVEAAAVR Unmodified 941.52943 0.52942943 1747 P62855 Rps26 40S ribosomal protein S26 yes yes 0 0 0 0 6.5 0.5 1 1 47.384 47.384 2 0.014432 14078 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.028 37.708 138.89 118.31 0 169.96 145.39 77.38 130 120 0 158 149 74 2 2 0 2 2 1 22571 15200 1747 14604 35403;35404 41100;41101 41100 2 NIVFQSAVPK Unmodified 1101.6182 0.61824444 2632 Q8R0H9 Gga1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 0 0 9.5 0.5 1 1 61.673 61.673 2 5.8628E-07 16773 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.68 96.373 123.12 21.715 27.554 59.061 26.836 102.64 115 23 28 56 28 97 2 1 1 2 1 2 9612.5 15201 2632 14605 35405;35406 41102;41103 41103 2 NIVHNYSEAEIK Deamidation (N) 1416.6885 0.68850885 2324;2750 Q80VP1;D3Z4V3;D3Z550;Q91W69 Epn1;Epn3 Epsin-1;Epsin-3 no no 0 1 0 0 5 0 1 48.253 48.253 3 0.0084707 15087 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.023 25.259 0 118.1 0 0 0 127.92 0 111 0 0 0 120 0 1 0 0 0 1 24850 15202 2324;2750 14606 35407 41104 41104 914 1 NIVHNYSEAEIK Unmodified 1415.7045 0.70449327 2324;2750 Q80VP1;D3Z4V3;D3Z550;Q91W69 Epn1;Epn3 Epsin-1;Epsin-3 no no 0 0 0 0 6.33 0.471 2 1 48.023 48.023 3;4 1.5082E-07 14379 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.79 83.668 225.64 206.18 343.86 90.35 292.14 193.47 213 213 334 93 288 185 2 2 3 1 2 2 18021 15203 2324;2750 14606 35408;35409;35410 41105;41106;41107 41106 3 NIVLSGGSTMFR Unmodified 1280.6547 0.6547063 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 9.5 0.5 1 1 64.572 64.572 2 5.4334E-18 17930 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 148.76 110.46 156.87 241.38 267.36 189.02 144.48 200.3 148 241 269 190 148 190 2 3 3 3 2 2 37568 15204 2836 14607 35411;35412 41108;41109;41110 41110 3 NIVNNYSEAEIK Unmodified 1392.6885 0.68850885 2549 Q8CHU3;A8Y5D4 Epn2 Epsin-2 no no 0 0 0 0 5 0 1 56.757 56.757 3 0.00016052 19212 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.69 59.439 49.129 0 38.525 28.308 0 0 46 0 37 28 0 0 1 0 1 1 0 0 3757.5 15205 2549 14608 35413 41111 41111 1 NIVPALTSK Unmodified 941.55458 0.55458155 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06;J3QPU6 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 9.5 0.5 1 1 60.188 60.188 2 0.0065191 17941 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.986 22.705 176.56 302.62 88.893 233.62 302.11 210.65 166 297 93 222 306 203 2 3 1 2 3 2 20088 15206 1142 14609 35414;35415 41112;41113;41114 41112 3 NIVQNYR Unmodified 905.47191 0.47191456 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 8 0 1 39.684 39.684 2 0.027229 9025 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.319 57.214 0 77.695 62.287 75.908 67.069 47.122 0 74 65 74 69 46 0 1 1 1 1 1 12778 15207 2730 14610 35416 41115 41115 1 NIVVGFAR Unmodified 874.50249 0.5024864 2873 Q99MN9;E9Q1J7 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 9 0 1 57.058 57.058 2 0.010551 16523 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.033 58.711 99.135 0 109.86 0 106.69 0 93 0 102 0 102 0 1 0 1 0 1 0 9366.3 15208 2873 14611 35417 41116 41116 1 NIVVVEGVR Unmodified 983.57638 0.57637963 2834 Q99JY0;D3YXU1 Hadhb Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase yes no 0 0 0 0 6 0 1 53.34 53.34 2 0.023902 16885 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.56 37.588 109.13 61.801 0 47.633 140.63 74.871 102 65 0 46 139 74 1 1 0 1 1 1 8277.4 15209 2834 14612 35418 41117 41117 1 NIVWIAECIAQR Unmodified 1471.7606 0.76056836 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 10.9 1.54 2 2 1 1 2 83.704 83.704 2;3 8.3837E-18 26562 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.71 103.97 118.31 114.41 121.62 168.73 184.18 153.48 111 116 120 161 187 147 4 5 5 5 6 4 178660 15210 1606 14613 35419;35420;35421;35422;35423;35424;35425;35426 41118;41119;41120;41121;41122;41123;41124;41125;41126 41120 9 NIYSEELR Unmodified 1022.5033 0.50327426 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 9 4 1 1 47.521 47.521 2 0.017052 14920 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.688 45.07 79.128 151.37 109.6 184.12 91.351 194.6 74 149 111 176 93 185 1 2 1 2 1 2 17485 15211 1580 14614 35427;35428 41127;41128 41128 2 NIYSLTPLLGQR Unmodified 1373.7667 0.76669959 837 E9PWK1;Q9D379;F6YTS6 Ephx1 Epoxide hydrolase 1 yes no 0 0 0 0 11 0 1 74.778 74.778 3 0.011142 22128 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.88 31.25 20.387 0 0 0 39.748 0 19 0 0 0 38 0 1 0 0 0 1 0 3939 15212 837 14615 35429 41129 41129 1 NIYYLCAPNR Unmodified 1282.6128 0.61284149 2936 Q9CQN1 Trap1 Heat shock protein 75 kDa, mitochondrial yes yes 0 0 0 0 9 0 1 56.798 56.798 2 0.0069478 16351 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.379 52.597 29.904 27.776 0 0 0 39.442 28 28 0 0 0 37 1 1 0 0 0 1 2601.5 15213 2936 14616 35430 41130 41130 1 NKDDQITLDEFK Unmodified 1464.7096 0.70963822 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 1 7 3.03 2 2 1 60.587 60.587 3;4 1.2551E-05 20993 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.54 69.314 897.77 845.21 874.04 1131.9 1207.7 1041.2 845 865 891 1104 1224 1005 5 6 4 6 5 5 100320 15214 1737 14617 35431;35432;35433;35434;35435 41131;41132;41133;41134;41135;41136 41136 6 NKDDYIPYPSIDEVVEK Unmodified 2022.9786 0.97860244 243 Q5SVL6;A0A171EBK8;A0A140LI95 Rap1gap2 Rap1 GTPase-activating protein 2 yes no 0 0 0 1 5 0 1 71.192 71.192 4 0.0082935 25905 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.86 25.918 50.431 0 0 0 18.867 29.31 47 0 0 0 19 28 1 0 0 0 1 1 2238.3 15215 243 14618 35436 41137 41137 1 NKDFAVDIIK Unmodified 1161.6394 0.63937381 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 1 8.5 0.5 1 1 62.454 62.454 3 0.001599 19763 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.258 22.996 148.7 137.87 0 71.045 0 256.91 139 139 0 65 0 241 1 2 0 1 0 2 17398 15216 3085 14619 35437;35438 41138;41139 41138 2 NKDLEGQLSDLEQR Unmodified 1643.8115 0.81147753 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 1 8.5 4.5 1 1 56.011 56.011 3 0.00029034 18917 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.734 66.901 78.189 159.51 135.42 0 150.56 222.76 74 157 130 0 148 213 1 2 1 0 1 2 13047 15217 3402 14620 35439;35440 41140;41141 41141 2 NKDQGTYEDYVEGLR Unmodified 1785.817 0.81695684 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5 Myl6 Myosin light polypeptide 6 yes no 0 0 0 1 5 0.816 1 1 1 55.444 55.444 3 5.7003E-07 18970 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.55 90.957 246.78 163.64 223.93 141.25 253.39 47.216 232 167 223 139 250 46 3 2 3 2 3 1 28648 15218 316 14621 35441;35442;35443 41142;41143;41144 41142 3 NKDTVFEEQIK Unmodified 1349.6827 0.68269519 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 1 6 0 1 54.021 54.021 3 2.7854E-05 17264 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.22 34.722 157.46 135.42 111.18 0 200.1 112.62 148 139 111 0 195 111 1 1 1 0 1 1 5874.1 15219 728 14622 35444 41145 41145 1 NKEDQYEHLDAADVTK Unmodified 1874.8646 0.86463532 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 8.5 4.5 1 1 48.647 48.647 4;5 0.0076648 16151 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.277 25.97 59.686 205.27 326.75 57.186 230.02 324.96 56 197 316 56 227 311 1 1 2 1 1 2 18624 15220 1957 14623 35445;35446 41146;41147 41146 2 NKGEFTNLQGVAASTSGK Unmodified 1807.9064 0.90644055 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 1 8.5 0.5 1 1 55.192 55.192 4 0.0017732 15610 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.663 28.863 118.42 0 115.61 93.065 158.04 85.908 111 0 111 93 158 83 2 0 1 1 2 1 11335 15221 3195 14624 35447;35448 41148;41149 41149 2 NKGPSPVSSEGIK Unmodified 1298.683 0.68302954 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 9.33 2.62 1 1 1 42.998 42.998 3 0.00026363 10690 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.703 53.071 167.59 0 276.04 75.157 250.82 210.31 157 0 259 74 250 204 2 0 3 1 3 3 18988 15222 2727 14625 35449;35450;35451 41150;41151;41152 41151 3 NKLDHYAIIK Unmodified 1213.6819 0.68190733 1735 P62751 Rpl23a 60S ribosomal protein L23a yes yes 0 0 0 1 8 0 1 52.397 52.397 4 0.053305 15003 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.001 9.503 78.828 0 96.443 84.971 0 88.478 74 0 93 83 0 83 1 0 1 1 0 1 4372.1 15223 1735 14626 35452 41153 41153 1 NKNFNIHGTNK 2 Deamidation (N) 1287.6208 0.62076364 2360 Q8BFR4 Gns N-acetylglucosamine-6-sulfatase yes yes 0 2 0 1 1 0 1 82.844 82.844 3 0.050382 29102 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.589 15.654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15224 2360 14627 35453 41154 41154 918;919;920 1 NKPEWFFEK Unmodified 1223.5975 0.597509 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 1 9 0 1 64.007 64.007 3 0.012778 19760 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.439 27.914 0 98.952 0 90.719 0 108.73 0 93 0 83 0 102 0 1 0 1 0 1 8727.5 15225 1176 14628 35454 41155 41155 1 NKPLISR Unmodified 826.50249 0.5024864 1042;1096;928;333 G5E829;A0A1W2P6X7;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;A0A1W2P882;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 1 11.5 1.5 1 1 36.711 36.711 3 0.025713 9722 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.77 44.767 2322.5 1501.9 2246.9 1708 1673.6 1827.9 2184 1594 2241 1714 1735 1749 2 2 2 2 2 1 135150 15226 1096;1042;333;928 14629 35455;35456 41156;41157 41157 2 NKPNADVK Unmodified 884.47158 0.4715802 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 1 8 0 1 35.095 35.095 3 0.026534 7059 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.504 31.68 99.125 131.64 0 0 121.91 105.25 93 130 0 0 120 102 1 1 0 0 1 1 3720.8 15227 2513 14630 35457 41158 41158 1 NKQELDINNITTYK Unmodified 1692.8683 0.86826413 1359 P12658 Calb1 Calbindin yes yes 0 0 0 1 9.33 2.62 1 1 1 59.448 59.448 3 0.0044274 20749 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.793 36.13 79.182 81.672 77.784 59.315 184.16 193.02 74 83 74 56 185 186 1 2 1 1 2 2 14273 15228 1359 14631 35458;35459;35460 41159;41160;41161 41161 3 NKQQTPNLK Unmodified 1069.588 0.58800695 3427 yes no 0 0 0 1 6 0 1 45.58 45.58 4 0.025716 13289 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.909 8.9297 147.64 125.91 146.9 110.92 87.839 126.48 139 130 148 111 93 121 1 1 1 1 1 1 5406.6 + 15229 3427 14632 35461 41162 41162 1 NKVPWNR Unmodified 912.49298 0.49298435 1769 P63085;A0A338P736 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 1 10 0 1 40.29 40.29 3 0.051741 7858 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.485 51.389 519.42 411.91 1078.9 669.96 593.51 766.57 492 437 1050 682 622 735 1 1 1 1 1 1 57459 15230 1769 14633 35462 41163 41163 1 NLAENISR Unmodified 915.47739 0.47739386 2555;3331;1969 Q8CI94;Q9WUB3;E9PUM3;Q3UEJ6;Q9ET01 Pygb;Pygm;Pygl Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form no no 0 0 0 0 5.5 0.5 1 1 41.304 41.304 2 0.010975 11810 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.311 39.297 546.05 434.89 551.33 189.24 160.03 512.44 514 452 544 187 167 485 2 2 2 1 1 2 65426 15231 2555;3331;1969 14634 35463;35464 41164;41165 41164 2 NLAIPVVNK Unmodified 966.58622 0.58621603 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 10.4 1.5 2 1 1 1 63.794 63.794 2;3 1.8371E-05 19738 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 148.38 108.84 348.4 272.21 427.09 571.98 488.04 541.23 327 268 427 555 491 517 2 3 3 4 3 3 90479 15232 919;937 14635 35465;35466;35467;35468;35469 41166;41167;41168;41169;41170 41167 5 NLALQAQK Unmodified 884.50797 0.50796571 1911 Q3TBL6 Tnfaip8l3 Tumor necrosis factor alpha-induced protein 8-like protein 3 yes yes 0 0 0 0 8 0 1 48.444 48.444 2 0.0035796 13143 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.37 39.046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15233 1911 14636 35470 41171 41171 1 NLALVFGPTLVR Unmodified 1298.7711 0.77105669 574 B1AQY2;Q69ZH9;F8VQ11;D6RDB5 Arhgap23 Rho GTPase-activating protein 23 yes no 0 0 0 0 6.5 5.5 2 2 80.617 80.617 2 6.1319E-13 21578 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.01 0 20.129 105.66 76.281 55.439 149.61 67.686 19 103 75 56 149 65 1 4 3 3 4 3 19532 15234 574 14637 35471;35472;35473;35474 41172;41173;41174;41175;41176;41177 41175 6 NLANTVTEEILEK Unmodified 1472.7722 0.77223848 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UZ48 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 5 0 1 78.932 78.932 3 4.1521E-08 29641 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.74 65.433 0 39.368 0 49.593 36.424 0 0 37 0 46 37 0 0 1 0 1 1 0 4824.5 15235 218 14638 35475 41178 41178 1 NLAPTWEELSK Unmodified 1286.6507 0.65066678 216 A0A0R4J1Y7;E9PXX7;Q91W90 Txndc5 Thioredoxin domain-containing protein 5 yes no 0 0 0 0 7 0 1 68.742 68.742 3 0.002414 23363 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.57 31.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15236 216 14639 35476 41179 41179 1 NLAQFPDTITGADTSSLVEVR Unmodified 2233.1226 0.12264092 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 6 0.816 1 1 1 78.116 78.116 3 9.8333E-10 28561 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.029 64.008 59.658 85.353 0 50.32 55.882 59.167 56 84 0 47 56 57 3 3 0 3 2 3 9871 15237 1880 14640 35477;35478;35479 41180;41181;41182 41181 3 NLASPEGTLATLGLK Unmodified 1483.8246 0.8246084 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10 2.16 1 1 1 77.629 77.629 2;3 1.619E-05 29662 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.632 51.304 108.64 119.09 75.518 115.99 44.082 126.66 102 120 74 111 46 120 2 3 1 3 1 2 14820 15238 570 14641 35480;35481;35482 41183;41184;41185 41185 3 NLATAYDNFVELVANLK Unmodified 1893.9836 0.98362824 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 11.4 1.02 1 2 1 1 107.23 107.23 3;4 3.9268E-25 33837 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.85 108.71 37 30.856 5.41 5.465 39.528 26.333 37 29 5 5 39 25 2 3 1 1 3 2 15983 15239 3327 14642 35483;35484;35485;35486;35487 41186;41187;41188;41189;41190;41191;41192 41186 7 NLATSLAELR Unmodified 1086.6033 0.60332266 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 7 0 1 64.525 64.525 2 0.013453 21414 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.48 12.155 0 68.397 45.668 0 67.99 0 0 65 46 0 65 0 0 1 1 0 1 0 5161.3 15240 287 14643 35488 41193 41193 1 NLATTVTEEILEK Unmodified 1459.777 0.77698951 2719 Q8VHM5;F7B5B5 Hnrnpr yes no 0 0 0 0 5 0 1 83.712 83.712 3 5.466E-05 31790 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.981 33.815 30.006 7.5527 0 0 23.239 23.855 28 9 0 0 23 23 1 1 0 0 1 1 2118.4 15241 2719 14644 35489 41194 41194 1 NLCSDDTPMVR Unmodified 1306.5646 0.56457067 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 13 0 1 47.075 47.075 2 0.00033394 14923 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.477 69.818 39.701 0 0 39.595 44.987 38.158 37 0 0 37 46 37 1 0 0 1 1 1 5534 15242 2272 14645 35490 41195 41195 1 NLDDTIDDEK Unmodified 1176.5146 0.51462681 549 Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9 Pabpc4 Polyadenylate-binding protein yes no 0 0 0 0 2.5 0.5 1 1 53.149 53.149 2;3 0.012477 18022 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.408 25.296 20.292 18.848 0 29.902 37.328 0 19 19 0 28 37 0 1 1 0 1 1 0 1144.6 15243 549 14646 35491;35492 41196;41197 41197 2 NLDFQALEETTEYDGGYTR Unmodified 2220.9811 0.98112164 1165 O08759;A0A0J9YVG1;A0A0J9YUY4 Ube3a Ubiquitin-protein ligase E3A yes no 0 0 0 0 4.5 0.5 1 1 76.62 76.62 3 3.8953E-07 28489 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.294 50.447 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6382.4 15244 1165 14647 35493;35494 41198;41199 41198 2 NLDFQDVLDK Unmodified 1205.5928 0.59281755 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 6 0 1 75.486 75.486 2 3.5063E-05 27378 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.338 31.79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15245 2862 14648 35495 41200 41200 1 NLDIERPTYTNLNR Unmodified 1717.8747 0.87474649 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 1 8.42 3.66 1 1 2 2 1 1 1 3 51.583 51.583 2;3;4 3.3545E-31 14598 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 165.86 122.17 2547.9 2116.7 2440 2199.7 3053.6 2304.4 2396 2174 2448 2180 3085 2229 11 14 11 13 15 11 3136000 15246 44;1313;1794;3223 14649 35496;35497;35498;35499;35500;35501;35502;35503;35504;35505;35506;35507 41201;41202;41203;41204;41205;41206;41207;41208;41209;41210;41211;41212;41213;41214;41215;41216;41217 41211 17 NLDIERPTYTNLNR Deamidation (N) 1718.8588 0.85876208 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 1 6.54 3.08 4 3 2 1 1 2 54.148 54.148 3 1.0261E-34 17811 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 173.06 137.4 1115.4 933.89 705.73 1202.5 1631.4 1446.7 1046 936 708 1147 1649 1390 11 10 7 12 13 13 318430 15247 44;1313;1794;3223 14649 35508;35509;35510;35511;35512;35513;35514;35515;35516;35517;35518;35519;35520 41218;41219;41220;41221;41222;41223;41224;41225;41226;41227;41228;41229;41230;41231;41232;41233 41224 13;14;15 16 NLDKEYLPIGGLAEFCK Unmodified 1965.987 0.98699906 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 9.38 2.39 1 1 1 2 1 2 77.512 77.512 3;4 1.0267E-06 26084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.506 59.142 992.2 952.97 1157.3 766.9 1358.2 1134.3 934 959 1128 739 1364 1089 9 9 9 8 11 8 298660 15248 1312 14650 35521;35522;35523;35524;35525;35526;35527;35528 41234;41235;41236;41237;41238;41239;41240;41241;41242;41243;41244;41245 41239 12 NLDLDSIIAEVK Unmodified 1328.7187 0.71874635 662;651 CON__P48668;CON__P04259;CON__P02538;CON__P13647;CON__O95678;CON__Q8VED5;CON__Q5XKE5;Q8VED5;CON__P35908v2;CON__P35908 Krt79 Keratin, type II cytoskeletal 79 no no 0 0 0 0 10.5 2.5 1 1 88.268 88.268 2 0.0048122 32024 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.82 42.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 15249 651;662 14651 35529;35530 41246;41247 41246 2 NLDPDDTAR Unmodified 1015.4571 0.45705235 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3;A0A1L1SQP7 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 2.5 0.5 1 1 37.707 37.707 2 9.8277E-07 10965 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.35 82.577 0 67.593 93.709 64.237 65.039 0 0 65 93 65 65 0 0 1 1 1 1 0 11007 15250 2343 14652 35531;35532 41248;41249 41249 2 NLDPEQMSQVLDAMFEK Unmodified 1993.9125 0.91251349 1495 P31324 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes yes 0 0 0 0 7.33 0.471 2 1 98.633 98.633 3;4 2.8901E-12 36132 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.82 85.86 12.802 4.3086 8.866 70.225 51.406 0 12 5 9 68 51 0 1 1 1 3 2 0 5214.3 15251 1495 14653 35533;35534;35535 41250;41251;41252 41250 3 NLDPFLLFDEFK Unmodified 1496.7551 0.75513185 470 A2AIH8;Q9D711 Pir Pirin yes no 0 0 0 0 7 0 1 102.25 102.25 3 0.0038687 36918 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.261 35.155 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15252 470 14654 35536 41253 41253 1 NLDQEQLSQVLDAMFEK Unmodified 2006.9619 0.96190652 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 7.67 0.471 1 2 97.251 97.251 3;4 1.6656E-08 34932 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.54 79.486 9.612 51.673 18.112 50.034 23.116 20.254 9 50 19 47 23 19 1 4 1 2 2 1 6778.6 15253 68 14655 35537;35538;35539 41254;41255;41256;41257 41256 4 NLDRPHEPEK Unmodified 1233.6102 0.61019895 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 1 13 0 1 32.379 32.379 4 0.0034076 7726 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.82 39.161 0 0 0 138.75 177.72 0 0 0 0 130 176 0 0 0 0 1 1 0 5919.8 15254 2674 14656 35540 41258 41258 1 NLDSLEEDLDFLR Unmodified 1577.7573 0.7573167 1701 P61759 Vbp1 Prefoldin subunit 3 yes yes 0 0 0 0 4 0 1 89.535 89.535 3 0.0010083 33643 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.409 49.141 0 0 0 5.2985 8.8498 9.3415 0 0 0 5 9 9 0 0 0 1 1 1 1242.6 15255 1701 14657 35541 41259;41260 41259 2 NLDSSGNK Unmodified 833.38791 0.38791015 716 S4R1M2;D3YXK2 Safb Scaffold attachment factor B1 yes no 0 0 0 0 6 0 1 35.192 35.192 2 0.0067233 8402 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.57 35.436 29.856 37.355 0 51.371 0 69.29 28 37 0 47 0 65 1 1 0 1 0 1 1770.3 15256 716 14658 35542 41261 41261 1 NLDTGEEIPLSLAEEK Unmodified 1756.8731 0.87307474 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 4 0 1 74.09 74.09 3 7.1631E-06 27191 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.713 56.332 69.507 0 39.946 18.386 0 39.442 65 0 38 19 0 37 1 0 1 1 0 1 3745.8 15257 2204 14659 35543 41262 41262 1 NLDYVATSIHEAVTK Unmodified 1659.8468 0.84680041 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 8.88 2.09 1 1 2 2 1 1 67.999 67.999 3;4 1.5001E-30 23152 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 159.69 122.14 728.16 511.52 891.77 847.17 1084.2 770.85 687 513 887 830 1099 743 6 4 6 5 7 4 188270 15258 1311 14660 35544;35545;35546;35547;35548;35549;35550;35551 41263;41264;41265;41266;41267;41268;41269;41270;41271 41265 9 NLEAIVQK Unmodified 913.52328 0.52328142 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10 3 1 1 59.214 59.214 3 0.010754 19047 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.679 16.367 39.564 27.124 0 50.278 0 128.99 37 28 0 46 0 121 1 1 0 1 0 2 8917.5 15259 1317 14661 35552;35553 41272;41273 41272 2 NLEAQHK Unmodified 838.42972 0.42971539 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 10 3 1 1 30.598 30.598 3 0.0079091 5683 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.116 32.69 0 172.61 240.21 204.64 213.4 0 0 166 240 204 213 0 0 2 2 2 2 0 55840 15260 879 14662 35554;35555 41274;41275 41274 2 NLEAQHKELEEK Unmodified 1466.7365 0.73652168 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 5 0 1 43.048 43.048 4 0.0003436 12605 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.558 45.41 59.808 55.551 0 79.121 93.644 0 56 56 0 74 93 0 1 1 0 1 1 0 4146.2 15261 879 14663 35556 41276 41276 1 NLEAVETLGSTSTICSDK Unmodified 1923.9095 0.9095366 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 6.83 2.97 2 3 3 1 1 2 67.42 67.42 2;3;4 2.8135E-19 24235 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.56 96.463 950.65 520.02 784.96 381.14 990.21 756.01 892 538 760 370 977 725 15 12 12 9 14 12 438340 15262 106;2253;2699 14664 35557;35558;35559;35560;35561;35562;35563;35564;35565;35566;35567;35568 41277;41278;41279;41280;41281;41282;41283;41284;41285;41286;41287;41288;41289;41290;41291;41292;41293;41294;41295;41296 41280 20 NLEAVETLGSTSTICSDK Deamidation (N) 1924.8936 0.89355218 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 0 5 0 1 75.167 75.167 3 0.0026326 27853 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.315 31.436 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 3123.7 15263 106;2253;2699 14664 35569 41297 41297 40 1 NLEGYVGFANLPNQVYR Unmodified 1952.9745 0.97446054 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 9.62 2 1 2 2 1 1 1 76.019 76.019 2;3 6.0879E-18 26858 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.29 108.42 266.81 180.92 268.57 254.94 208.66 183.53 251 185 268 251 213 177 5 3 4 5 3 3 177660 15264 879 14665 35570;35571;35572;35573;35574;35575;35576;35577 41298;41299;41300;41301;41302;41303;41304;41305 41298 8 NLEGYVGFANLPNQVYR Deamidation (N) 1953.9585 0.95847612 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 7 0 1 77.068 77.068 3 0.0058967 27198 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.459 34.354 29.904 27.776 0 39.747 36.876 0 28 28 0 37 37 0 1 1 0 1 1 0 2839.6 15265 879 14665 35578 41306 41306 237 1 NLEKQLETPAK Deamidation (N) 1270.6769 0.67688153 2027 Q499E4 Dzip1l Zinc finger protein DZIP1L yes yes 0 1 0 1 11 0 1 93.414 93.414 3 0.035545 30249 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.143 16.987 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 45246 15266 2027 14666 35579 41307 41307 801 1 NLENGTLQLSDLER Deamidation (N) 1601.7897 0.78967946 2842 Q99KH8 Stk24 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 35 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit yes yes 0 1 0 0 4 0 1 67.974 67.974 3 0.004199 24400 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.328 35.455 20.387 0 20.558 9.4714 19.439 20.254 19 0 19 9 19 19 1 0 1 1 1 1 1370.1 15267 2842 14667 35580 41308;41309 41308 1007 2 NLENWEQILQEK Unmodified 1542.7678 0.7678218 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6.67 0.471 1 2 81.42 81.42 2;3 3.9959E-05 30055 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.552 62.405 49.129 97.998 95.6 68.086 82.362 76.534 46 93 93 65 83 74 1 2 2 2 2 2 12762 15268 570 14668 35581;35582;35583 41310;41311;41312;41313 41310 4 NLEPEWAAAATEVK Unmodified 1527.7569 0.75692277 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 7.33 4.03 1 1 1 70.692 70.692 3 0.0001364 25687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.134 49.181 0 57.829 104.99 42.842 62.679 97.349 0 56 102 46 65 93 0 1 1 1 1 1 7311.1 15269 1933 14669 35584;35585;35586 41314;41315;41316 41315 3 NLEQISANITK Unmodified 1229.6616 0.66156582 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 7.5 0.5 1 1 62.198 62.198 2;3 5.6554E-20 19571 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 172.11 109.29 0 98.586 21.908 79.495 106.08 33.189 0 93 23 74 106 32 0 2 1 1 2 1 16862 15270 1568 14670 35587;35588 41317;41318 41318 2 NLEYTASLLEAVYIDETR Unmodified 2099.0423 0.04226533 373 Q6PDS5;A0A2I3BPC1;Q01065;A0A2I3BR90 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 6 0 1 96.224 96.224 3 4.7092E-08 36371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.073 50.967 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15271 373 14671 35589 41319 41319 1 NLFAFFDMAYQGFASGDGDKDAWAVR Unmodified 2898.3072 0.307164 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 11.3 1.25 1 1 1 103.65 103.65 4 3.0974E-24 33366 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.45 92.882 37 14.639 15.352 5 18.957 14.64 37 14 15 5 19 14 1 1 1 1 2 1 8841.3 15272 1312 14672 35590;35591;35592 41320;41321;41322;41323 41320 4 NLFPENLVQACFQQIQTVTK Unmodified 2377.21 0.21001614 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 9.92 3.09 1 1 2 2 2 2 2 92.132 92.132 3;4 1.5211E-30 29980 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 142.43 127.88 904.43 667.55 536.05 417.74 497.55 277.32 847 670 519 398 495 265 13 14 12 9 9 4 374480 15273 502;1544 14673 35593;35594;35595;35596;35597;35598;35599;35600;35601;35602;35603;35604 41324;41325;41326;41327;41328;41329;41330;41331;41332;41333;41334;41335;41336;41337;41338;41339;41340;41341;41342;41343;41344;41345;41346;41347 41333 24 NLFPENLVQACFQQIQTVTK Deamidation (N) 2378.194 0.19403172 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 1 0 0 8 0 1 95.185 95.185 3 0.0013129 34347 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.354 33.1 0 0 0 0 12.344 6.0437 0 0 0 0 12 6 0 0 0 0 1 1 1973.7 15274 502;1544 14673 35605 41348 41348 129 1 NLFPENLVQACFQQIQTVTKK Unmodified 2505.305 0.30497915 1544;502 A2APL5;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 1 10.7 0.471 1 2 86.419 86.419 4;5 5.5618E-13 27861 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.86 99.752 148.55 0 139.91 0 58.576 0 139 0 130 0 56 0 2 0 3 0 2 0 30443 15275 502;1544 14674 35606;35607;35608 41349;41350;41351;41352;41353 41350 5 NLFTQTLGLGSQK Unmodified 1405.7565 0.75652884 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 74.29 74.29 2;3 1.3318E-162 21926 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 269.28 211.68 306.62 214.83 120.73 242.68 64.978 107.94 287 223 116 227 65 103 2 3 3 3 2 3 75646 15276 2702 14675 35609;35610;35611;35612;35613 41354;41355;41356;41357;41358;41359;41360 41356 7 NLFWTSYDTNKK Unmodified 1515.7358 0.73579339 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 1 10 0 1 63.51 63.51 3 0.0019098 17519 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.162 25.18 44.476 35.209 69.386 65.902 53.551 58.168 42 37 69 65 56 56 1 1 1 1 1 1 6996.1 15277 175 14676 35614 41361 41361 1 NLGEILK Unmodified 785.4647 0.46470391 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 7 0 1 62.67 62.67 2 0.027413 20441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.302 29.265 78.928 0 79.67 0 116.11 0 74 0 74 0 111 0 1 0 1 0 1 0 10746 15278 1611 14677 35615 41362 41362 1 NLGESEIR Unmodified 916.46141 0.46140945 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 4 0 1 40.54 40.54 2 0.006881 11780 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.91 41.013 0 58.444 68.168 66.982 0 88.478 0 56 69 65 0 83 0 1 1 1 0 1 12230 15279 2829 14678 35616 41363 41363 1 NLGIPVITVLGDSK Unmodified 1424.8239 0.82388012 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 9 0 1 84.045 84.045 3 0.0081243 29163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.252 22.054 0 19.566 38.86 0 0 29.848 0 19 37 0 0 28 0 1 1 0 0 1 2698.2 15280 178 14679 35617 41364 41364 1 NLGLFIVK Unmodified 902.55894 0.55893865 2589 Q8K1J6 Trnt1 CCA tRNA nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 0 8 4.97 1 1 1 76.232 76.232 2 0.014424 26520 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.451 19.047 109.02 31.254 45.667 37.719 0 0 102 37 46 37 0 0 1 1 1 1 0 0 7757.7 15281 2589 14680 35618;35619;35620 41365;41366;41367 41365 3 NLGNSCYLNSVVQVLFSIPDFQR Unmodified 2669.3272 0.32717116 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 10.5 1.5 1 1 106.58 106.58 3 2.1505E-16 29877 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.11 91.398 9 0 0 0 14 0 9 0 0 0 14 0 1 0 0 0 1 0 2171.7 15282 1641 14681 35621;35622 41368;41369 41369 2 NLGQGGFFASLCWQDQK Deamidation (N) 1955.8836 0.88359662 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 1 0 0 9 0 1 81.067 81.067 3 0.0094355 27901 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.367 22.331 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15283 2306 14682 35623 41370 41370 909 1 NLGQGGFFASLCWQDQK Unmodified 1954.8996 0.89958103 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 11.5 1.5 1 1 81.204 81.204 3 5.4423E-07 25631 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.347 52.806 0 20.216 0 0 18.867 29.31 0 19 0 0 19 28 0 1 0 0 1 1 3964.1 15284 2306 14682 35624;35625 41371;41372 41371 2 NLGTIAK Unmodified 715.42284 0.4228391 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 11 2 1 1 48.726 48.726 2 0.034793 12532 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.452 33.949 157.59 0 356.99 299.56 201.31 157.77 148 0 343 297 198 148 1 0 2 2 1 1 35858 15285 1324 14683 35626;35627 41373;41374 41373 2 NLGVHISR Unmodified 894.50355 0.50354903 2285;2748 Q7TN29;Q91VZ6 Smap2;Smap1 Stromal membrane-associated protein 2;Stromal membrane-associated protein 1 no no 0 0 0 0 8 0 1 37.998 37.998 3 0.0012677 8285 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.74 64.393 0 0 47.171 58.397 0 0 0 0 46 56 0 0 0 0 1 1 0 0 8723.7 15286 2285;2748 14684 35628 41375 41375 1 NLHQSGFSLSGAQIDDNIPR Deamidation (N) 2169.0451 0.045059297 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 0 5.43 0.904 1 3 2 1 62.329 62.329 3;4 2.0707E-29 22087 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.63 120.59 50.431 39.368 69.533 98.294 131.33 58.108 47 37 65 94 130 56 2 1 2 4 4 2 31534 15287 1158 14685 35629;35630;35631;35632;35633;35634;35635 41376;41377;41378;41379;41380;41381;41382 41378 312 7 NLHQSGFSLSGAQIDDNIPR Unmodified 2168.061 0.061043713 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7 1.41 1 1 1 1 1 59.744 59.744 3;4 5.7565E-130 19136 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 227.95 187 217.04 167.24 265.33 137.77 279.02 248.94 204 167 259 139 277 241 4 5 5 3 4 5 214590 15288 1158 14685 35636;35637;35638;35639;35640 41383;41384;41385;41386;41387;41388 41386 6 NLHQSNFSLSGAQIDDNNPR Unmodified 2226.0414 0.041370903 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 6 0.816 1 1 1 50.866 50.866 3 8.1244E-23 14898 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.37 113.36 0 40.289 8.5336 18.594 57.42 8.779 0 38 9 18 56 9 0 2 1 2 2 1 24431 15289 1850;2212 14686 35641;35642;35643 41389;41390;41391 41391 3 NLIEQIGLLYQEYR Unmodified 1750.9254 0.92538508 954 Q8CHT1;E9QK62 Ngef Ephexin-1 yes no 0 0 0 0 10 0 1 94.24 94.24 3 0.034605 30707 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 36.597 24.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1596.1 15290 954 14687 35644 41392 41392 1 NLIEWLNK Unmodified 1028.5655 0.56548059 2642 Q8R1G2 Cmbl Carboxymethylenebutenolidase homolog yes yes 0 0 0 0 10.5 0.5 1 1 79.429 79.429 2 0.012545 24764 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.948 36.693 59.188 92.682 72.67 34.55 82.933 122.92 56 92 74 37 83 121 1 1 1 1 1 2 17121 15291 2642 14688 35645;35646 41393;41394 41393 2 NLILAGVK Unmodified 826.52764 0.52763852 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 10 0 1 63.889 63.889 2 0.0027408 17759 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.67 40.555 0 106.69 110.07 81.495 141.65 0 0 102 111 83 139 0 0 1 1 1 1 0 9250.8 15292 3316 14689 35647 41395 41395 1 NLILAPGEDGR Unmodified 1153.6091 0.60913632 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5 0 1 56.174 56.174 2 0.0055807 18930 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.439 16.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15293 20;2354 14690 35648 41396 41396 1 NLILELKPR Unmodified 1094.6812 0.68117905 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 1 10.5 0.5 1 1 64.261 64.261 3 0.00054813 17437 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.3 48.762 88.156 288.39 235.32 103.67 126.25 144.57 83 287 232 102 130 139 1 3 2 1 1 1 49937 15294 728 14691 35649;35650 41397;41398;41399 41399 3 NLILSAFPR Unmodified 1029.5971 0.59711507 285 B7ZWL1;A0A1D5RMJ8;Q6ZQ08 Cnot1 CCR4-NOT transcription complex subunit 1 yes no 0 0 0 0 12 0 1 71.083 71.083 2 0.0027555 18168 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.598 45.424 59.164 63.473 101.56 105.43 0 108.73 56 65 102 102 0 102 1 1 1 1 0 1 6674.6 15295 285 14692 35651 41400 41400 1 NLILVVR Unmodified 825.54362 0.54362294 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10.5 0.5 1 1 61.92 61.92 2 2.5398E-16 16349 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 187.93 63.608 615.03 1694.1 752.64 1699.2 1881.8 1928 581 1643 773 1628 1937 1859 1 2 1 2 2 2 410730 15296 2185 14693 35652;35653 41401;41402 41402 2 NLINQMLTINPAK Unmodified 1468.8072 0.8071842 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 9.83 4.06 1 1 1 2 1 78.886 78.886 2;3 6.0819E-19 24150 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 145.31 118.78 1014.2 857.12 969.05 191.37 1401.7 1282.2 951 873 927 196 1388 1228 7 6 6 2 9 8 469010 15297 1475;2818 14694 35654;35655;35656;35657;35658;35659 41403;41404;41405;41406;41407;41408;41409;41410;41411;41412;41413 41407 11 NLINQMLTINPAK Oxidation (M) 1484.8021 0.80209882 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 1 0 12 0 1 78.549 78.549 3 0.00084041 21212 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.46 52.262 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15298 1475;2818 14694 35660 41414 41414 101 1 NLINQMLTINPAKR Unmodified 1624.9083 0.90829523 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 1 1 0 1 70.128 70.128 3 0.00017088 23799 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 95.659 78.974 0 0 140.66 0 0 118.33 0 0 130 0 0 111 0 0 1 0 0 1 18681 15299 1475;2818 14695 35661 41415 41415 1 NLIPMDPNGLSDPYVK Unmodified 1771.8815 0.88147135 1783;2030;1425 P63318;Q2NKI4;P20444;Q4VA93 Prkcg;Prkca Protein kinase C gamma type;Protein kinase C;Protein kinase C alpha type no no 0 0 0 0 9 2.94 1 1 1 77.173 77.173 3 0.0003868 26789 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.474 40.896 0 68.109 102.89 75.96 62.512 117.61 0 65 102 74 65 112 0 1 2 1 1 2 10314 15300 1783;1425;2030 14696 35662;35663;35664 41416;41417;41418 41417 3 NLISPDLGVVFLNVPENLKDPEPNIK Unmodified 2873.5539 0.55385986 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 9.83 2.34 1 1 2 2 90.958 90.958 4;5 2.4194E-16 32238 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.678 48.623 89.181 133.93 108.21 143.12 229.77 126.24 84 133 108 140 228 121 3 5 4 7 6 4 53039 15301 1382 14697 35665;35666;35667;35668;35669;35670 41419;41420;41421;41422;41423;41424;41425;41426 41422 8 NLISPELGVVFFNVPDK Unmodified 1887.0142 0.014200086 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10 1.63 1 2 1 1 1 94.03 94.03 3;4 9.4677E-11 30659 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.04 96.717 260.14 54.047 136.98 163.85 154.85 64.641 246 54 132 158 153 61 7 3 6 6 3 4 42121 15302 510 14698 35671;35672;35673;35674;35675;35676 41427;41428;41429;41430;41431;41432;41433;41434;41435;41436;41437;41438 41436 12 NLISPELGVVFFNVPDKLR Unmodified 2156.1994 0.19937509 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 10 0 1 90.009 90.009 3 9.1029E-05 29166 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.848 48.061 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2664.9 15303 510 14699 35677 41439 41439 1 NLKEDGISAAK Unmodified 1144.6088 0.60880197 1411 P18872 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes yes 0 0 0 1 7.83 2.41 2 2 1 1 47.657 47.657 3;4 0.00016519 14665 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.059 53.341 1704 1573 2788.2 2087.9 2245.5 2179.9 1610 1622 2758 2091 2310 2097 5 4 6 5 6 3 355300 15304 1411 14700 35678;35679;35680;35681;35682;35683 41440;41441;41442;41443;41444;41445 41445 6 NLKQEDFELLCPDGTR Unmodified 1933.9204 0.92037606 2797 Q921I1;E9Q035;F7BAE9;F7CJN9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 1 5 0 1 65.476 65.476 3 3.0934E-08 23216 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.966 61.531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15305 2797 14701 35684 41446 41446 1 NLLDAVDQAK Unmodified 1085.5717 0.57168818 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 7 0.816 1 1 1 66.723 66.723 3 0.0013922 23151 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.977 36.09 69.745 0 47.69 127.11 64.009 39.442 65 0 46 120 65 37 2 0 1 3 2 1 15958 15306 3261 14702 35685;35686;35687 41447;41448;41449 41447 3 NLLDIDAPVTVCGDIHGQFFDLMK Unmodified 2717.3193 0.31930859 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 6 0 1 91.5 91.5 4 6.2669E-07 34518 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.72 43.532 0 24.167 18.254 19.166 27.263 33.334 0 23 19 19 28 32 0 1 1 1 1 1 1634.1 15307 1786 14703 35688 41450 41450 1 NLLLAEVINIIK Unmodified 1351.8439 0.84388728 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 103.64 103.64 3 3.0949E-14 34158 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.32 100.05 112.05 41.407 53.222 98.789 0 49.036 106 40 51 92 0 46 5 3 3 4 0 2 75478 15308 1702 14704 35689;35690;35691;35692;35693 41451;41452;41453;41454;41455;41456;41457;41458;41459;41460;41461 41454 11 NLLLLANSTEEQQK Unmodified 1599.8468 0.84680041 347 F8VPK5;A0A1Y7VMN0;P70336;A0A1Y7VLD1 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 8 0 1 69.66 69.66 3 0.00011314 23128 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.566 65.807 78.45 102.01 73.552 0 77.404 0 74 102 74 0 74 0 1 1 1 0 1 0 5666.1 15309 347 14705 35694 41462 41462 1 NLLLLGK Unmodified 769.50617 0.5061748 3154 Q9DCV4 Rmdn1 Regulator of microtubule dynamics protein 1 yes yes 0 0 0 0 12 0 1 70.055 70.055 2 0.027659 17788 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.964 13.121 0 108.53 0 115.03 102.35 125 0 102 0 107 107 120 0 1 0 1 1 1 9032 15310 3154 14706 35695 41463 41463 1 NLLLSGEQLEASR Unmodified 1428.7573 0.75725712 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 9.4 3.01 1 1 1 2 64.081 64.081 2;3 1.6332E-10 21211 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.03 50.434 236.51 148.14 242.49 304.12 226.62 162.71 222 149 241 288 231 157 4 4 5 4 4 4 43630 15311 2730 14707 35696;35697;35698;35699;35700 41464;41465;41466;41467;41468;41469 41466 6 NLLQVDLTK Unmodified 1042.6023 0.60226003 1310;1793 P05132;P68181 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 9 0.816 1 1 1 69.166 69.166 2 0.00052503 22246 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.63 36.318 226.06 208.41 241.54 45.455 397.91 353.22 213 214 236 46 394 342 3 3 2 1 3 3 29897 15312 1310;1793 14708 35701;35702;35703 41470;41471;41472 41471 3 NLLQVDLTKR Unmodified 1198.7034 0.70337105 1310;1793 P05132;P68181 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 1 10 0 1 59.44 59.44 3 0.0031518 15772 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.435 37.018 147.94 136.47 86.672 112.69 184.45 113.06 139 139 93 111 185 111 1 1 1 1 1 1 12063 15313 1310;1793 14709 35704 41473 41473 1 NLLSCENSDQGAR Unmodified 1462.6471 0.64705474 1578 P48318;D3Z5S3;D3Z1L8 Gad1 Glutamate decarboxylase 1 yes no 0 0 0 0 5 0 2 44.092 44.092 2;3 0.0068292 13150 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.426 23.092 18.657 0 0 0 0 29.848 18 0 0 0 0 28 2 0 0 0 0 1 4393.6 15314 1578 14710 35705;35706 41474;41475 41475 2 NLLSVAYK Unmodified 906.51747 0.51746776 1715;1005;1773;1797;1706;2944;1256 Q9CQV8;A2A5N1;P68510;P63101;A0A2I3BQ03;D3YXN6;F6VW30;P68254;F6YY69;O70456;P61982;P62259;D6REF3;F6WA09 Ywhab;Ywhah;Ywhaz;Ywhaq;Sfn;Ywhag;Ywhae 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 0 0 0 9.38 3.73 2 1 4 2 3 1 63.857 63.857 2;3 0.00084854 17195 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 148.38 60.393 23404 19997 28055 23942 26990 11565 22061 20593 28098 23881 27156 11146 19 16 15 17 16 13 7728200 15315 2944;1797;1773;1005;1256;1706;1715 14711 35707;35708;35709;35710;35711;35712;35713;35714;35715;35716;35717;35718;35719 41476;41477;41478;41479;41480;41481;41482;41483;41484;41485;41486;41487;41488;41489;41490;41491;41492;41493;41494;41495;41496;41497;41498 41489 23 NLLSVAYK Deamidation (N) 907.50148 0.50148335 1715;1005;1773;1797;1706;2944;1256 Q9CQV8;A2A5N1;P68510;P63101;A0A2I3BQ03;D3YXN6;F6VW30;P68254;F6YY69;O70456;P61982;P62259;D6REF3;F6WA09 Ywhab;Ywhah;Ywhaz;Ywhaq;Sfn;Ywhag;Ywhae 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta;14-3-3 protein theta;14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein epsilon no no 0 1 0 0 7.5 0.5 1 1 70.251 70.251 3 0.023644 24096 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.224 26.721 99.377 120.35 37.71 59.295 148.83 94.891 93 120 37 56 148 93 1 2 1 1 2 2 11809 15316 2944;1797;1773;1005;1256;1706;1715 14711 35720;35721 41499;41500 41499 266 2 NLLSVAYKNVVGGR Unmodified 1488.8413 0.84126152 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 1 0 1 68.558 68.558 3 0.023001 23256 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.408 27.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15317 1005 14712 35722 41501 41501 1 NLLYAACMAGK Oxidation (M);Deamidation (N) 1227.5628 0.56277975 698 D3YVW9;G3X9E0;Q810N6 Ankrd45 Ankyrin repeat domain-containing protein 45 yes no 0 1 1 0 8.67 0.943 2 1 31.867 31.867 4 0.0077125 6481 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.49 23.532 778.06 557.24 766.83 682.84 607.1 854.17 732 576 763 677 631 815 4 3 3 4 3 3 57102 15318 698 14713 35723;35724;35725 41502;41503;41504;41505 41503 198 38 4 NLLYIYPQSLNFANR Unmodified 1824.9523 0.95226853 226 A0A0U1RPH6;A0A0U1RNK7;E9PX48;A2A9M5;A2A9M4;Q8R1A4 Dock7 Dedicator of cytokinesis protein 7 yes no 0 0 0 0 12 0 1 81.961 81.961 3 0.00041988 22659 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.244 44.405 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 4083.4 15319 226 14714 35726 41506 41506 1 NLMNAVVLTVK Unmodified 1200.69 0.69002918 799 E0CXB9;Q61301 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 12 0 1 76.29 76.29 3 0.0032847 20381 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.836 40.104 0 0 0 29.914 36.668 19.208 0 0 0 28 37 19 0 0 0 1 1 1 2143.2 15320 799 14715 35727 41507 41507 1 NLMWYGVLGTR Unmodified 1308.6649 0.66487706 379 A0A2I3BQ43;A0JP53;D3YXJ0 Dgkh Diacylglycerol kinase yes no 0 0 0 0 12 0 1 77.401 77.401 2 0.010109 20833 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.398 39.496 29.872 0 28.873 28.559 17.224 38.95 28 0 28 28 19 37 1 0 1 1 1 1 2829.5 15321 379 14716 35728 41508 41508 1 NLNAIVQK Unmodified 898.52362 0.52361577 1289 O89053;G3UYK8 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 10 1.87 1 1 1 1 55.185 55.185 2;3 2.1534E-10 13845 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 173.88 67.59 938.25 600.45 765.36 725.3 713.37 1110.1 881 625 759 716 733 1059 4 3 3 4 4 4 168940 15322 1289 14717 35729;35730;35731;35732 41509;41510;41511;41512;41513 41512 5 NLNHVSYGR Unmodified 1058.5257 0.52574104 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8 1 1 1 32.704 32.704 2;3 0.012505 6517 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.243 38.071 0 20.216 0 0 28.291 29.041 0 19 0 0 28 28 0 1 0 0 1 1 2502.3 15323 1458 14718 35733;35734 41514;41515 41514 2 NLNLVSSTASIK Unmodified 1245.6929 0.69286595 2773 Q91YM2 Arhgap35 Rho GTPase-activating protein 35 yes yes 0 0 0 0 9 0 1 62.902 62.902 3 0.0038516 19287 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.314 30.097 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15324 2773 14719 35735 41516 41516 1 NLNPHWNETFLFEGFPYEK Unmodified 2381.1117 0.1116823 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 0 7 0 1 82.948 82.948 3 5.1694E-05 30094 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.453 38.758 29.904 27.776 0 9.837 0 39.442 28 28 0 9 0 37 1 1 0 1 0 1 2161.2 15325 355 14720 35736 41517 41517 1 NLNPIFNESFAFDIPTEK Unmodified 2095.0262 0.026221336 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 0 7.5 0.5 1 1 89.484 89.484 3 6.1149E-05 33069 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.167 45.224 0 29.152 58.843 0 18.538 68.761 0 28 56 0 19 65 0 1 2 0 1 2 6275.9 15326 355 14721 35737;35738 41518;41519 41518 2 NLPFDFTWK Unmodified 1166.576 0.57604528 3020 Q9D0E1;B8JK33;B8JK32 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 11 1.41 2 1 83.925 83.925 2;3 0.00056196 26631 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.111 56.417 142.17 135.69 156.55 124.45 169.22 114.53 134 139 158 121 171 111 3 3 3 2 3 2 20293 15327 3020 14722 35739;35740;35741 41520;41521;41522 41521 3 NLPFDLTWQK Unmodified 1260.6503 0.65027285 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 9.5 0.5 1 1 80.436 80.436 3 0.0009264 25270 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.379 44.773 59.862 44.908 0 70.041 53.361 58.173 56 46 0 65 56 56 1 1 0 1 1 1 17008 15328 521 14723 35742;35743 41523;41524 41524 2 NLPFSFTK Unmodified 952.50182 0.5018177 82;623 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7;B2RUJ2;B7ZNX6;Q80TH2 Lrrc7;Erbb2ip Leucine-rich repeat-containing protein 7;Protein LAP2 no no 0 0 0 0 10 0 1 70.794 70.794 2 0.047503 20921 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.654 28.458 129.13 139.19 0 109.87 85.872 185.17 121 139 0 102 93 176 1 1 0 1 1 1 9738.1 15329 82;623 14724 35744 41525 41525 1 NLPFSVENK Unmodified 1046.5397 0.53965977 1403 P17665 Cox7c Cytochrome c oxidase subunit 7C, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 62.171 62.171 2;3 3.6748E-06 19552 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 157.96 91.274 148.52 67.919 183.85 107.71 178.4 174 139 74 176 107 181 168 2 2 2 1 3 3 36597 15330 1403 14725 35745;35746;35747;35748 41526;41527;41528;41529 41527 4 NLPFTPILASVNR Unmodified 1440.8089 0.80889876 493 A2AMH3;A2AMH5;A2AMH4;Q6X893;A2AMH8 Slc44a1 Choline transporter-like protein 1 yes no 0 0 0 0 11 0 1 78.213 78.213 2 0.030741 23764 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.097 6.4979 0 0 0 0 45.781 67.984 0 0 0 0 46 65 0 0 0 0 1 1 5014.8 15331 493 14726 35749 41530 41530 1 NLPGLVQEGEPFSEEATLFTK Unmodified 2305.1478 0.14779303 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 6 0 1 87.337 87.337 3 1.1471E-05 32749 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.059 41.916 20.387 0 0 20.234 28.359 0 19 0 0 19 28 0 1 0 0 1 1 0 2126.9 15332 2276 14727 35750 41531 41531 1 NLPLALR Unmodified 795.49667 0.49667274 3121 Q9DBE8;F6RBY3 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes no 0 0 0 0 9 0 1 57.938 57.938 2 0.011006 16908 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.9 35.836 0 108.53 0 109.02 130.97 0 0 102 0 102 130 0 0 1 0 1 1 0 9937.3 15333 3121 14728 35751 41532 41532 1 NLPLFSEGEAQELTQILSK Unmodified 2116.1052 0.10519994 2670 Q8R570 Snap47 Synaptosomal-associated protein 47 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 96.55 96.55 3 5.6087E-27 34747 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.75 112.93 28.875 78.162 97.085 9.837 15.69 15.99 27 76 93 9 15 15 2 3 2 1 1 1 21845 15334 2670 14729 35752;35753;35754;35755 41533;41534;41535;41536;41537 41534 5 NLPLPPPPPPR Unmodified 1193.6921 0.69207809 613 B2M1R6;P61979;H3BKD0;H3BLL4;H3BLP7 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 8.67 2.05 2 2 1 1 57.894 57.894 2;3 1.2362E-07 16978 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.82 64.623 207.52 253.2 350.83 300.05 259.68 329.12 195 250 348 296 269 315 5 5 8 7 7 7 29305 15335 613 14730 35756;35757;35758;35759;35760;35761 41538;41539;41540;41541;41542;41543;41544;41545;41546;41547 41546 10 NLPPLTDAQK Unmodified 1095.5924 0.59242362 2997 Q9CZ04;D3Z440;D3YVI6 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 7 0 1 56.294 56.294 3 0.0040418 17475 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.542 34.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15336 2997 14731 35762 41548 41548 1 NLPQPQSGQR Unmodified 1123.5734 0.57341951 2317;1802 Q80UG2;P70207;P70206 Plxna4;Plxna2;Plxna1 Plexin-A4;Plexin-A2;Plexin-A1 no no 0 0 0 0 6 0 1 35.428 35.428 2 0.011444 8590 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.42 23.5 9.3998 28.844 18.78 0 0 20.254 9 28 19 0 0 19 1 1 1 0 0 1 2312.6 15337 2317;1802 14732 35763 41549 41549 1 NLPQYVSNELLEEAFSVFGQVER Unmodified 2667.318 0.31804626 2839 Q99K48 Nono Non-POU domain-containing octamer-binding protein yes yes 0 0 0 0 9.67 2.49 1 1 1 113.59 113.59 3 5.2402E-19 37899 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.04 89.142 1.068 14.024 9.5561 1.093 2.9212 6.3126 1 14 9 1 3 6 1 3 1 1 1 1 2353.8 15338 2839 14733 35764;35765;35766 41550;41551;41552 41550 3 NLPVFQPGVK Unmodified 1097.6233 0.62332982 439 A2AAN0;O35250 Exoc7 Exocyst complex component 7 yes no 0 0 0 0 9.5 0.5 1 1 64.745 64.745 3 0.0023973 20144 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.283 30.677 118.63 152.56 0 70.428 110.19 186.68 111 149 0 65 111 176 2 2 0 1 2 2 10313 15339 439 14734 35767;35768 41553;41554;41555 41553 3 NLPWLFTFNVK Unmodified 1377.7445 0.74450759 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 6.75 5.76 2 1 1 94.206 94.206 3 3.717E-15 33466 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 160.36 121.14 79.105 58.817 0 94.71 111.83 70.777 74 59 0 89 113 68 5 4 0 5 5 2 15641 15340 1250 14735 35769;35770;35771;35772 41556;41557;41558;41559;41560;41561;41562 41559 7 NLQLLGATAIEDK Unmodified 1384.7562 0.75619449 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 7.5 0.5 1 1 72.57 72.57 3 7.5111E-05 25139 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.494 62.266 0 96.691 71.632 59.152 37.054 47.979 0 92 74 56 37 46 0 2 2 1 1 1 10126 15341 121 14736 35773;35774 41563;41564 41563 2 NLQNFITGR Unmodified 1061.5618 0.56179219 2339 Q80YA9;A2AI78 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes no 0 0 0 0 10 0 1 60.878 60.878 2 0.0021847 16453 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.143 33.429 128.3 90.3 0 109.65 97.357 125.14 120 93 0 102 102 120 1 1 0 1 1 1 10540 15342 2339 14737 35775 41565 41565 1 NLQNLLILTAIK Unmodified 1352.8391 0.83913625 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.33 5.22 2 1 2 1 90.501 90.501 2;3 9.0155E-21 32936 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 152.67 113.8 2521.6 2169.3 2533.3 2701.6 2455 2666.8 2372 2231 2564 2643 2554 2559 15 15 12 14 18 13 1012600 15343 2185 14738 35776;35777;35778;35779;35780;35781 41566;41567;41568;41569;41570;41571;41572;41573;41574;41575;41576;41577;41578;41579;41580;41581;41582;41583;41584;41585;41586;41587;41588;41589 41574 24 NLQNLLILTAIK Deamidation (N) 1353.8232 0.82315184 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 11.1 0.99 2 3 1 1 97.242 97.242 2;3 1.3916E-05 30740 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.752 51.093 5.2353 38.625 66.506 8.9104 24.186 48.725 5 37 65 9 24 47 1 3 4 1 2 3 24719 15344 2185 14738 35782;35783;35784;35785;35786;35787;35788 41590;41591;41592;41593;41594;41595;41596;41597 41593 867;868 8 NLQNLLILTAIKADR Unmodified 1695.0043 0.004304102 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 12 0 1 81.899 81.899 3 8.6021E-05 22661 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.668 78.913 69.227 0 86.998 55.203 43.573 58.453 65 0 83 56 46 56 1 0 1 1 1 1 9222 15345 2185 14739 35789 41598 41598 1 NLQSAEEWYK Unmodified 1266.5881 0.58806652 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.4 2.87 1 2 1 1 61.663 61.663 2;3 4.9021E-09 20855 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 155.15 98.587 246.16 310.23 417.31 312.21 338.31 364.51 232 306 408 306 343 351 4 4 4 3 3 4 90630 15346 1557 14740 35790;35791;35792;35793;35794 41599;41600;41601;41602;41603;41604 41600 6 NLQSLDPSHR Unmodified 1165.584 0.5839842 1332 P09240 Cck Cholecystokinin;Cholecystokinin-33;Cholecystokinin-12;Cholecystokinin-8 yes yes 0 0 0 0 6 0 1 41.765 41.765 3 0.010887 11541 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.567 34.653 0 58.517 63.824 67.241 0 88.478 0 56 65 65 0 83 0 1 1 1 0 1 5192.5 15347 1332 14741 35795 41605 41605 1 NLQTNETR Unmodified 974.47812 0.47812215 1828 Q3UU93;P80560 Ptprn2 Receptor-type tyrosine-protein phosphatase N2 yes no 0 0 0 0 4 0 1 28.94 28.94 2 0.029066 6404 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.879 44.671 30.044 0 0 0 9.414 0 28 0 0 0 9 0 1 0 0 0 1 0 1311.4 15348 1828 14742 35796 41606 41606 1 NLQTVNVDEN Unmodified 1144.536 0.53603095 1754 P62900 Rpl31 60S ribosomal protein L31 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 52.157 52.157 2 7.3885E-07 17741 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 134.25 120.74 110.17 45.697 55.896 99.411 0 128.99 103 47 56 94 0 121 2 2 2 3 0 2 24145 15349 1754 14743 35797;35798;35799;35800 41607;41608;41609;41610 41607 4 NLQYYDISAK Unmodified 1213.5979 0.59790293 1744 P62827;Q14AA6 Ran;1700009N14Rik GTP-binding nuclear protein Ran yes no 0 0 0 0 8.75 2.49 2 1 1 60.115 60.115 2;3 3.5883E-07 18700 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.22 57.431 344.11 208.45 418.64 191.16 380.69 385.55 324 217 407 190 385 371 4 2 3 3 4 3 68446 15350 1744 14744 35801;35802;35803;35804 41611;41612;41613;41614 41613 4 NLREDGEK Unmodified 959.46722 0.46722311 1330;622;3136 B2RSH2;A0A0A6YXN0;A0A0A6YXC2;P08752;Q9DC51 Gnai1;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 1 7.33 4.03 1 1 1 31.939 31.939 3 0.048725 7811 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.708 22.44 283.88 327.51 760.73 496.5 596.66 602.32 269 334 743 506 612 581 2 2 3 3 3 3 82028 15351 622;1330;3136 14745 35805;35806;35807 41615;41616;41617 41615 3 NLRPGDSQNAAK Unmodified 1269.6426 0.64256171 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 1 7 0 1 33.381 33.381 3 0.050453 6863 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.544 18.69 20.217 0 28.491 38.238 26.862 19.487 19 0 28 37 28 19 1 0 1 1 1 1 1464.6 15352 2725 14746 35808 41618 41618 1 NLSAQCQEVR Unmodified 1203.5666 0.56661958 3191;192 A0A0R4J0X8;Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 no no 0 0 0 0 5 0 1 36.366 36.366 2 0.0081256 9388 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.276 28.552 20.292 18.848 0 0 28.291 29.041 19 19 0 0 28 28 1 1 0 0 1 1 1875 15353 192;3191 14747 35809 41619 41619 1 NLSDAATK Unmodified 818.4134 0.41339662 1878 Q02248;E9Q6A9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 13 0 1 40.732 40.732 2 0.010277 11882 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.044 59.722 108.6 79.74 74.736 0 0 88.478 102 83 74 0 0 83 1 1 1 0 0 1 6969.7 15354 1878 14748 35810 41620 41620 1 NLSDLIDLVPSLCEDLLSSVDQPLK Unmodified 2782.431 0.43102711 495;1565 A2AMW0;F7CAZ6;P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 9.14 2.53 3 1 1 2 118 118 3;4 2.7247E-20 38288 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.942 66.695 20.245 28.351 22.731 20.579 43.595 36.276 19 28 23 20 44 35 4 5 4 3 4 5 14403 15355 495;1565 14749 35811;35812;35813;35814;35815;35816;35817 41621;41622;41623;41624;41625;41626;41627;41628 41621 8 NLSFATIYDVLSTKPVLNK Unmodified 2122.1674 0.16740626 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 1 12.5 0.5 1 1 91.267 91.267 3;4 3.8396E-07 25984 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.926 74.556 0 39.368 0 54.604 0 39.442 0 37 0 52 0 37 0 1 0 2 0 1 5494.4 15356 3342 14750 35818;35819 41629;41630 41629 2 NLSIVVSLCNNK 2 Deamidation (N) 1361.6861 0.68606601 1950 Q3U095 Nxpe2 NXPE family member 2 yes yes 0 2 0 0 10 1 1 1 66.918 66.918 2 0.01838 18497 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.548 22.161 63.806 93.631 60.961 76.979 111.91 19.168 60 93 65 74 111 19 1 2 2 1 2 1 24199 15357 1950 14751 35820;35821 41631;41632;41633 41633 783;784 3 NLSLEAIQLCDR Unmodified 1430.7188 0.71876312 2386 Q8BGT8 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes yes 0 0 0 0 6.67 0.471 1 2 68.447 68.447 2;3 0.00021865 23172 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.976 35.023 78.949 44.036 78.855 29.921 102.01 96.227 74 47 74 28 102 93 2 2 2 1 3 3 12304 15358 2386 14752 35822;35823;35824 41634;41635;41636 41635 3 NLSLSGHVGFDSLPDQLVNK Unmodified 2139.096 0.096032235 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6 Sept11 Septin-11 yes no 0 0 0 0 7 0 1 73.647 73.647 3 1.2888E-10 25652 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.507 67.666 88.586 26.847 56.793 39.1 102.62 66.362 83 28 56 37 102 65 2 1 2 1 2 2 6111.5 15359 112 14753 35825 41637;41638 41637 2 NLSNAEICSVFLLDQNELVAK Unmodified 2376.1995 0.19951103 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 6.33 0.471 2 1 88.034 88.034 3;4 0.00019376 32479 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.662 35.5 0 9 28 0 0 0 0 9 28 0 0 0 0 1 1 0 0 0 3121.2 15360 2054 14754 35826;35827;35828 41639;41640;41641 41641 3 NLSNAEICSVFLLDQNELVAK Deamidation (N) 2377.1835 0.18352661 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 1 0 0 13 0 1 87.779 87.779 3 0.0016928 34630 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.5 24.06 0 78.188 32.764 57.887 72.766 57.62 0 74 37 56 74 56 0 1 1 1 1 1 4762.2 15361 2054 14754 35829 41642 41642 804 1 NLSPVVSNELLEQAFSQFGPVEK Unmodified 2531.2908 0.29076888 2658 Q8R326 Pspc1 Paraspeckle component 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 96.466 96.466 4 5.1725E-12 34724 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.389 51.722 23.478 89.717 24.31 79.785 93.234 101.81 22 86 24 75 95 98 1 3 2 2 3 4 7192 15362 2658 14755 35830;35831;35832 41643;41644;41645;41646 41644 4 NLSPYVSNELLEEAFSQFGPIER Unmodified 2638.2915 0.29149716 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 7 0.816 1 1 1 99.763 99.763 3 9.9145E-28 36427 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.35 91.643 2.146 15.786 10.382 20.342 20.576 12.792 2 15 11 19 20 12 1 2 2 3 3 1 8482.1 15363 2724 14756 35833;35834;35835 41647;41648;41649;41650 41648 4 NLSSAGEEAR Unmodified 1032.4836 0.48360145 512 A2AS47;A2AS45;Q68FH0;A2AS44 Pkp4 Plakophilin-4 yes no 0 0 0 0 4 0 1 32.903 32.903 2 0.00016709 8186 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.568 42.391 39.34 26.5 38.246 0 38.702 0 37 28 37 0 37 0 1 1 1 0 1 0 2960.2 15364 512 14757 35836 41651 41651 1 NLSTFAVDGK Unmodified 1050.5346 0.53457439 3037 Q9D172;A0A1W2P870 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 9.25 2.28 1 1 1 1 59.911 59.911 2;3 1.2205E-08 19352 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 150.04 80.619 355.64 221.38 368.93 318.11 435.49 477.93 334 223 368 315 446 460 2 2 3 2 3 3 61173 15365 3037 14758 35837;35838;35839;35840 41652;41653;41654;41655 41652 4 NLTDLGK Unmodified 759.41267 0.41266834 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 10 3 1 1 53.376 53.376 2;3 0.0089745 17778 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.674 9.2526 394.43 283.16 373.69 293.59 291.4 437.27 371 297 375 294 300 418 2 2 2 2 1 2 44518 15366 1681 14759 35841;35842 41656;41657 41657 2 NLTEDNSQNQDVIAK Unmodified 1687.8013 0.80130678 1476 P28658 Atxn10 Ataxin-10 yes yes 0 0 0 0 4 0 1 51.813 51.813 3 2.9652E-05 17106 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.262 45.614 29.754 57.578 0 20.767 0 78.884 28 56 0 19 0 74 1 1 0 1 0 1 7046.2 15367 1476 14760 35843 41658 41658 1 NLTNPNTVIILIGNK Unmodified 1622.9356 0.93555583 2729 Q91V41;Q50HX3;A0A2R8VHW9 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 10.8 1.34 1 2 1 1 1 80.083 80.083 2;3 1.9698E-23 27426 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.92 92.624 59.555 86.947 199.15 156.9 75.098 264.36 56 83 194 148 74 250 1 1 3 2 1 3 120500 15368 2729 14761 35844;35845;35846;35847;35848;35849 41659;41660;41661;41662;41663;41664 41659 6 NLTNVDWEDR Unmodified 1260.5735 0.57347909 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 4 0 1 56.524 56.524 2 0.02936 19401 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.225 30.627 0 0 70.33 0 0 59.696 0 0 65 0 0 56 0 0 1 0 0 1 3588.6 15369 1089 14762 35850 41665 41665 1 NLVDNITGQR Unmodified 1128.5887 0.58873523 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 7 0 1 53.663 53.663 2 0.0070642 16190 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.066 35.842 69.745 0 0 39.227 64.567 47.194 65 0 0 37 65 46 1 0 0 1 1 1 3545.1 15370 3266 14763 35851 41666 41666 1 NLVDSYMAIVNK Unmodified 1365.6962 0.69623677 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 10.8 1.79 2 1 1 79.559 79.559 2;3 3.162E-27 27159 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 178.53 135.5 287.92 72.032 60.291 88.827 258.93 290.57 269 74 56 83 260 278 4 2 1 2 4 4 169290 15371 118;1534 14764 35852;35853;35854;35855 41667;41668;41669;41670;41671 41667 5 NLVDSYMSIINK Unmodified 1395.7068 0.70680145 960 E9QLL2;Q8BZ98;F2Z460;E0CXZ8 Dnm3 Dynamin-3 yes no 0 0 0 0 10.3 0.471 2 1 81.715 81.715 2;3 2.2042E-05 25354 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.85 38.533 0 77.823 54.609 29.49 0 20.254 0 74 56 28 0 19 0 2 2 1 0 1 7418.3 15372 960 14765 35856;35857;35858 41672;41673;41674 41674 3 NLVDSYVAIINK Unmodified 1347.7398 0.73981614 1082 Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm2 Dynamin-2 yes no 0 0 0 0 9 0 1 79.159 79.159 2 0.0009978 26974 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.143 12.984 0 29.792 0 30.604 0 29.848 0 28 0 28 0 28 0 1 0 1 0 1 2139.6 15373 1082 14766 35859 41675 41675 1 NLVELAELELK Unmodified 1269.718 0.71801807 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 6 0 1 87.637 87.637 3 0.00059659 32904 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.611 44.405 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1337.3 15374 2225 14767 35860 41676 41676 1 NLVTGDHIPTPQDLPQR Unmodified 1899.9803 0.9802742 1678 P60840 Ensa Alpha-endosulfine yes yes 0 0 0 0 5 0 1 57.69 57.69 3 0.00024443 19613 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.103 40.271 59.91 65.12 0 29.528 57.22 49.036 56 65 0 28 56 46 1 2 0 1 1 1 5617.8 15375 1678 14768 35861 41677;41678 41678 2 NLVTVLYPSGIPDDQLQAYR Unmodified 2261.1692 0.16919718 263 A0A1B0GSM1;Q99K23 Ufsp2 Ufm1-specific protease 2 yes no 0 0 0 0 8 0 1 82.536 82.536 3 0.00075426 29231 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.047 25.723 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 1830.3 15376 263 14769 35862 41679 41679 1 NLVVIPK Unmodified 781.50617 0.5061748 1548 P45376 Akr1b1 Aldose reductase yes yes 0 0 0 0 10.8 1.48 1 1 1 1 60.799 60.799 2 0.027535 16605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.62 56.078 453.19 367.99 345.01 335.84 601.92 390.05 426 380 343 333 603 379 4 4 2 3 4 3 120260 15377 1548 14770 35863;35864;35865;35866 41680;41681;41682;41683 41681 4 NLYIISVK Unmodified 948.56442 0.56441796 1745 P62830;A2A6F8 Rpl23 60S ribosomal protein L23 yes no 0 0 0 0 11.5 0.5 1 1 68.507 68.507 2 0.0067233 19354 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.57 41.501 0 0 47.718 46.116 337.06 0 0 0 46 46 336 0 0 0 1 1 2 0 33387 15378 1745 14771 35867;35868 41684;41685 41684 2 NMAEQIIQEIYSQVQSK Unmodified 2007.9935 0.993541 1537 P40142 Tkt Transketolase yes yes 0 0 0 0 10.2 1.64 2 1 1 100.88 100.88 3;4 2.4694E-18 32729 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.45 117.58 78.909 19.907 48.599 46.651 46.599 73.29 75 19 47 44 47 70 3 1 2 2 2 3 43295 15379 1537 14772 35869;35870;35871;35872 41686;41687;41688;41689 41688 4 NMEEEVAITR Unmodified 1190.5601 0.56013721 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 2.5 0.5 1 1 49.347 49.347 2 0.00021393 15823 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.734 57.732 39.305 36.116 96.555 38.298 67.99 49.036 37 37 93 37 65 46 1 1 2 1 1 1 17845 15380 2074 14773 35873;35874 41690;41691 41690 2 NMFPPNLVEACFK Unmodified 1565.7371 0.73705572 1643 P56564;O35544 Slc1a3;Slc1a6 Excitatory amino acid transporter 1;Excitatory amino acid transporter 4 yes no 0 0 0 0 10 2.16 1 1 1 79.367 79.367 3 0.00013409 26896 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.466 45.605 186.86 220.28 262.44 161.99 223.73 107.17 176 223 259 158 222 102 4 5 4 3 4 1 23220 15381 1643 14774 35875;35876;35877 41692;41693;41694;41695;41696 41693 5 NMGGPYGGGNYGPGGSGGSGGYGGR Unmodified 2188.8981 0.89807748 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 9.5 3.5 1 1 48.053 48.053 3 8.1244E-21 14570 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.748 79.358 0 49.897 6.6182 30.058 27.23 19.706 0 47 9 28 28 19 0 2 1 1 2 1 9603.4 15382 1271 14775 35878;35879 41697;41698 41697 2 NMGLYGER Unmodified 938.428 0.42800083 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 6 0 1 44.372 44.372 2 0.012552 12770 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.921 48.069 108.64 0 135.07 113.27 0 178.02 102 0 130 111 0 167 1 0 1 1 0 1 25790 15383 1312 14776 35880 41699 41699 1 NMLINIVDTAQQK Unmodified 1486.7814 0.78136338 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 9 0 1 76.83 76.83 3 7.9309E-16 25819 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.45 102.77 59.684 0 67.97 46.227 0 0 56 0 65 46 0 0 1 0 1 1 0 0 4687.3 15384 2343 14777 35881 41700 41700 1 NMMAACDPR Unmodified 1064.4202 0.42015503 1795;2283;1863;2975;3072;3183;2805 P99024;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 7 3.16 1 1 1 1 1 40.22 40.22 2;3 0.0017021 9973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.997 80.214 613.68 283.56 611.11 317.56 310.92 540.12 576 315 592 325 327 515 4 5 3 2 2 3 123160 15385 1863;1795;2283;2805;2975;3072;3183 14778 35882;35883;35884;35885;35886 41701;41702;41703;41704;41705 41704 5 NMQDMVEDYR 2 Oxidation (M) 1331.5122 0.51220074 657 CON__P04264 yes yes 0 0 2 0 1 0 1 35.935 35.935 2 0.052247 9467 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.368 32.015 20.276 0 18.719 38.998 17.404 19.757 19 0 19 37 19 19 1 0 1 1 1 1 4373.3 + 15386 657 14779 35887 41706 41706 35;36 1 NMQNAEEWFK Unmodified 1295.5605 0.56047157 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 8.67 3.09 1 1 1 66.653 66.653 2;3 3.8265E-05 23209 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.09 75.781 227.29 36.052 0 239.93 144.63 285.82 212 37 0 222 152 272 3 1 0 3 1 2 27027 15387 1329 14780 35888;35889;35890 41707;41708;41709 41707 3 NMQTSGR Unmodified 792.35484 0.35483589 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 5.5 0.5 1 1 21.8 21.8 2 0.012879 3227 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.9 92.084 20.182 27.684 44.71 25.485 14.27 26.243 19 28 44 26 15 25 1 2 2 2 1 1 4285 15388 2243 14781 35891;35892 41710;41711 41710 2 NMSVIAHVDHGK Unmodified 1306.6452 0.64520425 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 7.5 0.5 1 1 42.908 42.908 4 0.00025398 11327 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.602 54.062 196.15 179.53 244.46 101.99 0 0 185 185 241 102 0 0 2 2 2 1 0 0 10082 15389 1652 14782 35893;35894 41712;41713 41712 2 NMVPQQALVIR Unmodified 1267.7071 0.70707622 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 9.29 2.05 2 1 1 1 1 1 59.948 59.948 2;3 4.3985E-33 20870 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 188.98 130.56 956.01 270.25 859.24 552.87 723.02 754.31 897 306 831 544 739 724 5 3 4 5 5 3 271990 15390 106;2253;2699 14783 35895;35896;35897;35898;35899;35900;35901 41714;41715;41716;41717;41718;41719;41720;41721 41721 8 NMVQFNLQTLPK Unmodified 1431.7544 0.75442035 1245 O70194;A0A2R8VK20 Eif3d Eukaryotic translation initiation factor 3 subunit D yes no 0 0 0 0 10 0 1 72.93 72.93 3 0.019482 21946 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 45.915 20.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15391 1245 14784 35902 41722 41722 1 NMYEEEINETR Unmodified 1426.6035 0.60345859 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 2.33 0.471 2 1 48.576 48.576 2;3 1.5125E-07 15486 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 109.72 84.062 0 0 19.246 38.397 47.705 9.594 0 0 19 37 46 9 0 0 1 2 1 1 6345.9 15392 1379 14785 35903;35904;35905 41723;41724;41725 41723 3 NMYNWLLQNPK Unmodified 1419.6969 0.69690547 2306 Q80TZ3;B1B0B8 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 11 0 1 75.893 75.893 2 0.00019769 22653 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.668 76.364 0 29.792 0 0 49.162 0 0 28 0 0 47 0 0 1 0 0 1 0 4080.8 15393 2306 14786 35906 41726 41726 1 NNAASEGVLASFFNSLLSK Unmodified 1967.9953 0.99525556 282 Q6PDL0;A0A1D5RM94;A0A1D5RMC1 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 0 11 0 1 102.14 102.14 3 0.0007661 33929 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.155 37.196 0 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 6456.4 15394 282 14787 35907 41727;41728 41728 2 NNASTDYDLSDK Unmodified 1341.5685 0.56845329 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 0 4 0.816 1 1 1 47.738 47.738 2;3 2.1316E-05 15152 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.22 63.698 69.237 36.275 84.98 75.941 116.03 174.71 65 37 84 74 120 167 2 1 3 2 3 3 17016 15395 1467 14788 35908;35909;35910 41729;41730;41731 41730 3 NNAYLAQSPQLYK Unmodified 1508.7623 0.7623425 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7 0 1 58.792 58.792 3 0.034473 18756 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.189 17.456 69.745 0 0 60.018 63.245 57.891 65 0 0 56 65 56 1 0 0 1 1 1 5109.6 15396 2803 14789 35911 41732 41732 1 NNFPASSPER Unmodified 1117.5152 0.51523593 1121 H3BJZ7;Q4KUS2 Unc13a Protein unc-13 homolog A yes no 0 0 0 0 5 0 1 36.922 36.922 2 0.010062 9664 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.711 33.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15397 1121 14790 35912 41733 41733 1 NNGAGYFLEHLAFK Deamidation (N) 1580.7623 0.7623425 2998 Q9CZ13;A0A0A6YW82;A0A0A6YVZ0 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 0 8.67 2.05 2 2 1 1 80.677 80.677 3;4 0.00013505 31026 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.439 71.898 565.6 281.15 145.91 474.35 288.71 604.71 529 288 139 445 297 575 6 5 2 6 3 7 95249 15398 2998 14791 35913;35914;35915;35916;35917;35918 41734;41735;41736;41737;41738;41739;41740 41740 1043;1044 7 NNGVLFENQLLQIGLK Deamidation (N) 1799.9781 0.97814893 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 1 0 0 7 0 1 92.125 92.125 3 1.3549E-12 34117 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.624 74.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15399 1401 14792 35919 41741 41741 497;498 1 NNIDYEPVHLYK Unmodified 1503.7358 0.73579339 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 6 0 1 57.379 57.379 3 1.4061E-05 18870 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.401 64.834 0 48.944 0 0 77.404 0 0 46 0 0 74 0 0 1 0 0 1 0 8573.3 15400 1977 14793 35920 41742 41742 1 NNIFEESYR Unmodified 1170.5306 0.53055165 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 5 0 1 53.418 53.418 2 0.063854 17596 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.028 32.158 29.856 37.355 0 30.295 16.448 59.227 28 37 0 28 19 56 1 1 0 1 1 1 2418.5 15401 844 14794 35921 41743 41743 1 NNIPYFETSAK Unmodified 1282.6194 0.61936665 1600 P51150 Rab7a Ras-related protein Rab-7a yes yes 0 0 0 0 8.5 2.69 1 1 1 1 59.895 59.895 2;3 1.1955E-07 19324 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.13 87.354 186.71 68.028 301.74 108.98 174.64 212.48 176 74 288 112 176 204 4 2 4 3 3 4 20669 15402 1600 14795 35922;35923;35924;35925 41744;41745;41746;41747 41745 4 NNLAGAEELFAR Deamidation (N) 1304.6361 0.63607935 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 5 0.707 1 2 1 71.306 71.306 2;3 0.00036209 25862 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.573 59.968 157.72 143.22 100.11 82.645 168.31 74.917 148 149 102 83 167 74 2 4 2 1 2 1 25081 15403 2185 14796 35926;35927;35928;35929 41748;41749;41750;41751 41748 869;870 4 NNLAGAEELFAR Unmodified 1303.6521 0.65206377 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.25 3.34 2 1 1 65.224 65.224 2;3 5.4322E-121 23411 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 249.22 199.26 671.58 559.22 627.33 667.11 607.17 464.15 632 578 639 655 625 445 4 4 3 4 4 3 249660 15404 2185 14796 35930;35931;35932;35933 41752;41753;41754;41755 41755 4 NNLGAEAPHQNGECHPNEK Deamidation (N) 2115.9028 0.90282851 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 1 0 0 3 0 1 35.045 35.045 4 0.00028115 9713 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.819 36.73 0 0 30.296 0 0 49.036 0 0 28 0 0 46 0 0 1 0 0 1 2570.2 15405 2137 14797 35934 41756 41756 836 1 NNLLTNK Unmodified 815.45012 0.45011648 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 9 0 1 47.243 47.243 2 0.033716 11797 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.313 38.232 108.94 101.18 0 118.59 145.44 114.18 102 102 0 111 148 111 1 1 0 1 1 1 9992.6 15406 3307 14798 35935 41757 41757 1 NNLNPSWEPFR Unmodified 1372.6524 0.65239812 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 9.33 2.62 1 1 1 63.877 63.877 2;3 1.6415E-16 22858 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 168.46 132.92 295.49 119.83 189.04 217.23 229.42 338.84 277 130 185 213 240 324 3 2 2 3 3 3 38522 15407 3371 14799 35936;35937;35938 41758;41759;41760 41760 3 NNLNPVWEPFK Deamidation (N) 1357.6667 0.6666512 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 1 0 0 8 0 1 73.015 73.015 3 0.0097622 24734 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.471 31.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15408 1896 14800 35939 41761 41761 779 1 NNLSFIETSALDSTNVEEAFK 2 Deamidation (N) 2330.0802 0.080166979 1556 P46638;G3UZD3;G3UZL4 Rab11b Ras-related protein Rab-11B yes no 0 2 0 0 4 0 1 91.447 91.447 3 0.011847 33940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.115 19.105 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15409 1556 14801 35940 41762 41762 586;587;588 1 NNLVDIIQQNK Unmodified 1297.699 0.69901396 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 8 0 2 68.026 68.026 2;3 0.00075217 22347 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.721 20.74 68.711 73.3 111.7 82.157 101.25 48.567 65 75 111 83 102 46 2 2 2 2 2 1 10185 15410 2451 14802 35941;35942 41763;41764 41763 2 NNMETETLCSDEDAQELLR Unmodified 2266.9682 0.96819046 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 2 0 1 65.693 65.693 3 3.4618E-05 23533 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.496 44.832 29.844 17.895 18.49 18.953 37.831 0 28 19 19 19 37 0 1 1 1 1 1 0 1746.8 15411 62 14803 35943 41765 41765 1 NNNLAVSSK Unmodified 945.48796 0.48795855 3376 Q9Z1G3;A0A2I3BPD0 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 8.25 2.77 1 2 1 39.899 39.899 2;3 1.4121E-05 11172 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.27 81.48 206.74 182.55 84.651 124.01 149.04 171.48 194 186 83 120 148 166 2 2 1 2 2 2 29615 15412 3376 14804 35944;35945;35946;35947 41766;41767;41768;41769 41769 4 NNNQQLAQLQK Unmodified 1297.6739 0.67386184 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 8.67 3.09 1 1 1 46.344 46.344 3 3.3002E-08 12975 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.43 71.087 109.13 115.36 42.231 0 131.94 87.19 102 116 42 0 129 83 1 2 1 0 2 1 9441.3 15413 513 14805 35948;35949;35950 41770;41771;41772 41771 3 NNPEPWNK Unmodified 997.46174 0.4617438 2157 Q62425;A0A0N4SVQ1 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes no 0 0 0 0 7 0 1 47.633 47.633 2 0.010964 13417 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.358 52.331 108.4 89.987 99.008 0 103.39 96.188 102 93 97 0 102 93 1 1 1 0 1 1 8570.6 15414 2157 14806 35951 41773 41773 1 NNPEYSSFFGVMGASSAMVFSAMGAAYGTAK Unmodified 3149.3933 0.39327817 941 P63082;E9Q9C5 Atp6v0c V-type proton ATPase 16 kDa proteolipid subunit yes no 0 0 0 0 11.5 1.12 1 1 1 1 105.95 105.95 4 7.3861E-09 29306 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.68 44.938 19.252 9.2416 30.376 12.233 14.063 41.173 18 9 29 12 14 39 2 1 2 2 1 4 8412.1 15415 941 14807 35952;35953;35954;35955 41774;41775;41776;41777 41776 4 NNPPTIVQDK Unmodified 1124.5826 0.58258722 2058 Q5SRX1;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 8 3.56 1 1 1 46.478 46.478 2;3 0.00072784 14484 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.962 20.354 29.613 66.427 44.056 59.774 0 49.036 28 65 47 56 0 46 1 2 2 1 0 1 10781 15416 2058 14808 35956;35957;35958 41778;41779;41780 41778 3 NNPSKPLR Unmodified 924.51411 0.51411372 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 1 7.5 0.5 1 1 30.78 30.78 3 0.0079381 5249 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.294 29.339 85.694 379.72 362.31 259.77 382.44 303.56 83 368 367 264 387 295 1 2 2 2 2 2 29808 15417 1263 14809 35959;35960 41781;41782 41782 2 NNPWVEK Unmodified 885.43447 0.43446642 3251 Q9JMF3 Gng13 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 yes yes 0 0 0 0 7 0 1 51.276 51.276 2 0.024623 15018 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.6 28.028 108.56 100.14 63.774 0 0 138.58 102 102 65 0 0 130 1 1 1 0 0 1 41176 15418 3251 14810 35961 41783 41783 1 NNQFQALLQYGDPVNAQQAK Unmodified 2246.108 0.10799391 2780 Q91Z31;A0A0G2JGW0;Q3V328 Ptbp2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 0 7 0 1 75.08 75.08 3 0.00021644 26332 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.397 34.762 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1904.7 15419 2780 14811 35962 41784 41784 1 NNQITNNQR 2 Deamidation (N) 1102.5003 0.50031415 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 2 0 0 2 0.816 1 1 1 27.649 27.649 2 0.00033966 6451 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.5 67.605 64.974 7.7188 73.963 22.149 75.388 68.205 61 9 70 23 74 66 3 1 3 2 3 4 5541.7 15420 1334 14812 35963;35964;35965 41785;41786;41787;41788;41789 41789 405;406;407;408 5 NNQITNNQR Deamidation (N) 1101.5163 0.51629857 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 1 0 0 5.14 3.27 2 3 1 1 26.238 26.238 2 0.0005238 4642 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.71 98.153 176.47 89.134 231.95 122.93 65.665 116.13 166 93 224 121 65 111 6 3 6 4 3 4 37708 15421 1334 14812 35966;35967;35968;35969;35970;35971;35972 41790;41791;41792;41793;41794;41795;41796;41797;41798 41797 405;406;407;408 9 NNQITNNQR Unmodified 1100.5323 0.53228298 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 0 0 0 6.5 3.1 2 1 1 1 1 24.009 24.009 2;3 4.2541E-12 3724 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 173.48 156.01 177.46 73.052 76.551 156.4 89.828 231.04 166 72 74 148 93 221 4 4 2 4 3 5 75777 15422 1334 14812 35973;35974;35975;35976;35977;35978 41799;41800;41801;41802;41803;41804;41805;41806 41803 8 NNQLLHLAFR Unmodified 1224.6727 0.67273963 1916 Q3TDK6;A0A0J9YUG1 Rogdi Protein rogdi homolog yes no 0 0 0 0 9 0 1 57.952 57.952 3 0.001271 16904 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.643 44.781 0 50.008 0 49.416 45.846 0 0 47 0 46 46 0 0 1 0 1 1 0 7920.9 15423 1916 14813 35979 41807 41807 1 NNRPSEGPLQTR Unmodified 1367.6906 0.69057454 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 7 3.54 1 1 1 1 28.944 28.944 3 9.1779E-08 5963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.91 79.44 157.13 265.1 340.88 61.236 238.42 343.91 148 263 333 60 237 329 3 4 6 2 3 5 138610 15424 2185 14814 35980;35981;35982;35983 41808;41809;41810;41811;41812;41813 41810 6 NNRPSEGPLQTR Deamidation (N) 1368.6746 0.67459012 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 1 4 0 2 32.012 32.012 3 2.2559E-12 8040 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.03 97.605 59.181 53.807 106.84 29.552 55.919 107.14 56 56 102 28 56 102 1 1 1 1 1 2 20080 15425 2185 14814 35984;35985 41814;41815 41815 871 2 NNSAIDSGINLTTDTSK Unmodified 1749.8381 0.83808621 1042 Q3UHH0;F8WHB1;Q9R0K7 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 5 0 1 58.844 58.844 3 5.7223E-06 20210 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.073 43.424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15426 1042 14815 35986 41816 41816 1 NNSIWDELFFNK Unmodified 1525.7201 0.72014333 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;Q8BYJ0 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 8 1 1 1 89.945 89.945 3 0.0031608 33358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.344 32.238 9 19.892 19.365 0 0 0 9 19 19 0 0 0 1 1 1 0 0 0 2335.5 15427 2753 14816 35987;35988 41817;41818 41817 2 NNSWAPK Unmodified 815.3926 0.3926016 1121 H3BJZ7;Q4KUS2 Unc13a Protein unc-13 homolog A yes no 0 0 0 0 7 0 1 44.492 44.492 2 0.052604 11755 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.854 37.616 48.965 35.464 36.017 36.87 75.71 0 46 37 37 37 74 0 1 1 1 1 1 0 39973 15428 1121 14817 35989 41819 41819 1 NNTQVLINCR Unmodified 1230.6139 0.61390412 1723 P62317 Snrpd2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 0 6 0 1 43.051 43.051 2 0.0012929 12101 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.939 55.868 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15429 1723 14818 35990 41820 41820 1 NNTVNTMR Unmodified 948.44471 0.44471353 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 5 0 1 28.879 28.879 2 0.0064479 5906 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.81 52.906 29.904 0 23.473 28.324 46.815 0 28 0 23 28 46 0 1 0 1 1 1 0 3240.8 15430 2555 14819 35991 41821 41821 1 NNVAENQSR Deamidation (N) 1031.4632 0.46320036 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 1 0 0 1.5 0.5 1 1 24.535 24.535 2 0.011821 4606 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 115.78 60.718 39.564 47.34 0 0 106.08 17.794 37 47 0 0 102 19 1 2 0 0 2 1 8198.3 15431 1491 14820 35992;35993 41822;41823 41823 556 2 NNVAENQSR Unmodified 1030.4792 0.47918478 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 3 0.816 1 1 1 21.582 21.582 2 0.00012681 3582 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 132.39 96.151 39.701 14.896 14 0 61.979 62.191 37 14 14 0 60 60 1 1 1 0 1 2 7664.9 15432 1491 14820 35994;35995;35996 41824;41825;41826 41825 3 NPADLPK Unmodified 753.4021 0.40210366 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 6.5 0.5 1 1 46.002 46.002 2 0.032261 13475 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.476 37.409 443.7 400.42 289.25 446.18 407.28 488.33 417 409 300 431 425 469 3 3 2 3 3 3 32360 15433 1652 14821 35997;35998 41827;41828;41829 41827 3 NPAETLLLSEPLNGDLLGQYSQLAR Deamidation (N) 2712.397 0.39702486 719 D3Z2Y2;D3Z3I3;D3YY53;Q8VDK1 Nit1 Nitrilase homolog 1 yes no 0 1 0 0 6 0 1 96.008 96.008 3 0.0025001 36357 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.423 28.746 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 928.51 15434 719 14822 35999 41830 41830 200 1 NPAIQNDFSYYR Unmodified 1486.6841 0.68409218 2410 Q8BHZ0 Fam49a Protein FAM49A yes yes 0 0 0 0 6 0 1 57.593 57.593 2 4.6989E-09 18944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.53 62.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15435 2410 14823 36000 41831 41831 1 NPARDEEGVFENNR Unmodified 1645.7445 0.7444606 603 B1AXV0 Frrs1l DOMON domain-containing protein FRRS1L yes yes 0 0 0 1 2 0 1 40.741 40.741 3 0.00028255 12173 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 70.26 50.506 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15436 603 14824 36001 41832 41832 1 NPAVLSAASFDGR Unmodified 1303.6521 0.65206377 2001 Q3UPL0;S4R2A9 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 6.5 0.5 1 1 58.89 58.89 2 0.00057545 18734 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.683 49.946 29.749 0 49.622 0 0 0 28 0 46 0 0 0 1 0 1 0 0 0 3209.6 15437 2001 14825 36002;36003 41833;41834 41834 2 NPDDITNEEYGEFYK Unmodified 1832.7741 0.77408897 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 4.38 3.39 2 3 1 1 1 66.356 66.356 3;4 1.6972E-22 23559 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.19 124.7 497.9 405.98 811.67 510.27 292.81 705.86 468 409 796 499 308 670 4 9 10 8 6 9 293000 15438 1322 14826 36004;36005;36006;36007;36008;36009;36010;36011 41835;41836;41837;41838;41839;41840;41841;41842;41843;41844 41841 10 NPDDITNEEYGEFYK Deamidation (N) 1833.7581 0.75810456 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 1 0 0 2 0 1 66.568 66.568 3 0.014664 23963 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.618 33.452 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1967.3 15439 1322 14826 36012 41845 41845 393 1 NPDDITQEEYGEFYK Unmodified 1846.7897 0.78973904 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 4.36 2.9 2 3 3 2 1 66.688 66.688 2;3;4 2.0636E-11 24445 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.54 83.099 396.05 594.06 451.37 647.03 708.15 732.95 372 588 457 626 723 703 9 10 5 9 10 9 329370 15440 1354 14827 36013;36014;36015;36016;36017;36018;36019;36020;36021;36022;36023 41846;41847;41848;41849;41850;41851;41852;41853;41854;41855;41856;41857;41858;41859;41860 41852 15 NPDELAEALDER Unmodified 1370.6314 0.6313879 3357 Q9Z0G0 Gipc1 PDZ domain-containing protein GIPC1 yes yes 0 0 0 0 2 0 2 63.937 63.937 2;3 0.00014975 22607 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.926 63.828 0 28.242 20.004 0 8.727 20.005 0 28 19 0 9 19 0 2 1 0 1 1 5511.5 15441 3357 14828 36024;36025 41861;41862 41861 2 NPDNLEELLLNETALGALAR Unmodified 2165.1328 0.13281167 1799 P70188 Kifap3 Kinesin-associated protein 3 yes yes 0 0 0 0 5.5 0.5 1 1 97.313 97.313 3 3.075E-11 36620 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.156 61.368 12.797 10.742 5.9106 3.279 8.617 26.404 12 11 6 3 9 25 1 2 1 1 1 2 2519.8 15442 1799 14829 36026;36027 41863;41864 41864 2 NPDSYNGAIR Deamidation (N) 1106.4993 0.49925152 2645 Q8R1N4;A0A0A0MQL8 Nudcd3 NudC domain-containing protein 3 yes no 0 1 0 0 3 0 1 40.25 40.25 2 0.059855 12152 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.201 35.567 29.694 0 58.828 36.238 37.037 0 28 0 56 37 37 0 1 0 1 1 1 0 3526.7 15443 2645 14830 36028 41865 41865 1 NPEILAIAPVLLDALTDPSR Unmodified 2117.1732 0.17321992 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 9 0 1 109.66 109.66 3 0.011117 37483 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.091 23.617 0 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 0 0 822.07 15444 828 14831 36029 41866 41866 1 NPELQNLLLDDFFK Unmodified 1704.8723 0.87228688 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 8.5 2.69 1 1 1 1 95.301 95.301 2;3 2.4021E-05 34446 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.28 75.736 40.774 0 12.579 29.854 9 20.254 38 0 12 28 9 19 2 0 1 2 1 1 9242.8 15445 3142 14832 36030;36031;36032;36033 41867;41868;41869;41870 41869 4 NPEPQDQGELFQGVDPR Unmodified 1924.8915 0.89151877 1898 Q0VGU4;A0A087WQ93 Vgf yes no 0 0 0 0 3 0.816 1 1 1 59.482 59.482 3 0.0016009 20491 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.702 35.848 0 19.907 57.002 78.062 45.948 67.979 0 19 57 75 47 65 0 1 2 2 2 2 12851 15446 1898 14833 36034;36035;36036 41871;41872;41873 41871 3 NPFGNVGLLMGEAGK Unmodified 1502.7551 0.75514863 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 9 0 1 81.394 81.394 3 2.5425E-05 28043 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.619 59.421 69.522 44.256 0 0 57.278 37.808 65 46 0 0 56 37 1 1 0 0 1 1 4244.3 15447 577 14834 36037 41874 41874 1 NPFLAAVTTNR Unmodified 1202.6408 0.6407708 1530 Q05DV1;P37040 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 11 0 1 64.201 64.201 2 0.0028564 17381 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.332 46.588 44.719 0 103.76 46.115 36.584 39.442 42 0 98 46 37 37 1 0 2 1 1 1 10562 15448 1530 14835 36038 41875;41876 41875 2 NPGGWVEK Unmodified 885.43447 0.43446642 106 A0A0G2JGX4;Q6PIC6 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 8.5 2.69 1 1 1 1 51.019 51.019 2 0.010928 15946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.502 24.122 435 261.66 345.49 484.93 144.74 598.16 408 259 343 465 148 565 3 2 3 4 1 4 127350 15449 106 14836 36039;36040;36041;36042 41877;41878;41879;41880 41877 4 NPGPSGPQPR Unmodified 1005.4992 0.49919194 3177 Q9ER00 Stx12 Syntaxin-12 yes yes 0 0 0 0 5 1 1 1 28.211 28.211 2 0.011913 5207 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.734 27.854 0 19.729 29.112 0 0 19 0 19 28 0 0 19 0 1 1 0 0 1 4431.8 15450 3177 14837 36043;36044 41881;41882 41882 2 NPLPSKETIEQEK Unmodified 1511.7831 0.78313752 1421 P20065 Tmsb4x Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 0 0 0 1 8.67 3.09 1 1 1 52.885 52.885 4 0.00015591 16817 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.554 58.526 99.338 118.1 152.57 298.27 336.17 259.29 93 111 148 287 343 250 1 1 2 3 3 2 24551 15451 1421 14838 36045;36046;36047 41883;41884;41885 41883 3 NPLVAVYYTNR Unmodified 1308.6826 0.68263561 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 0 0 0 10 0 1 63.281 63.281 2 0.0097216 17463 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.547 31.074 54.723 0 0 0 42.289 47.829 51 0 0 0 42 46 1 0 0 0 1 1 4682.1 15452 3332 14839 36048 41886 41886 1 NPMVETLGTVLQLK Unmodified 1541.8487 0.84871466 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 10 0 1 91.173 91.173 3 0.0065286 29633 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.318 19.589 0 20.216 0 14.665 33.844 0 0 19 0 14 33 0 0 1 0 1 1 0 2343 15453 1512 14840 36049 41887 41887 1 NPNASEPK Unmodified 855.40865 0.4086456 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7 3.54 1 1 1 1 31.372 31.372 2 0.0012835 7027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 141.52 77.313 83.947 189.68 153.3 308.74 254.39 169.7 79 186 149 301 255 166 2 3 2 3 3 3 41018 15454 2699 14841 36050;36051;36052;36053 41888;41889;41890;41891 41889 4 NPPGFAFVEFEDPR Unmodified 1620.7573 0.75725712 1838;2426 P84104;A2A4X6;Q8BL97 Srsf3;Gm12355;Srsf7 Serine/arginine-rich splicing factor 3;Serine/arginine-rich splicing factor 7 no no 0 0 0 0 8 3.56 1 1 1 76.992 76.992 3 5.5517E-05 28130 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.764 54.924 70.047 0 129.59 0 84.851 116.97 66 0 120 0 83 112 3 0 2 0 2 3 24887 15455 1838;2426 14842 36054;36055;36056 41892;41893;41894 41893 3 NPPGFAFVEFEDPRDAADAVR Unmodified 2319.092 0.09200949 1838 P84104;A2A4X6 Srsf3;Gm12355 Serine/arginine-rich splicing factor 3 yes no 0 0 0 1 6 0 1 75.519 75.519 4 0.013512 27417 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.389 19.797 20.387 0 0 0 27.631 48.248 19 0 0 0 28 46 1 0 0 0 1 1 2768.4 15456 1838 14843 36057 41895 41895 1 NPPGFAFVEFEDPRDAEDAVR Unmodified 2377.0975 0.097488798 2426 Q8BL97 Srsf7 Serine/arginine-rich splicing factor 7 yes yes 0 0 0 1 4.67 0.471 1 2 75.125 75.125 3;4 4.1204E-07 27738 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.164 43.57 69.233 34.819 56.516 36.76 74.726 28.797 65 38 56 38 74 28 2 2 2 2 2 1 9071.5 15457 2426 14844 36058;36059;36060 41896;41897;41898 41897 3 NPPSDAVQR Unmodified 982.48321 0.48320752 1 A0A067XG53;O70589 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 0 4 0 1 30.384 30.384 2 0.0071878 7079 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.939 36.34 0 0 20.558 0 0 39.442 0 0 19 0 0 37 0 0 1 0 0 1 3205 15458 1 14845 36061 41899 41899 1 NPQAVLDVLEFYNSK Deamidation (N) 1736.8621 0.86211612 1099 G5E884;O88643;S4R2K7 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 1 0 0 9 0 1 90.887 90.887 3 0.013392 32154 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.408 25.455 39.701 0 0 40.441 0 0 37 0 0 37 0 0 1 0 0 1 0 0 2330 15459 1099 14846 36062 41900 41900 291 1 NPQVPCILVGPGTGIAPFR Unmodified 1992.0615 0.061501405 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 9 0 1 79.741 79.741 3 0.01176 27213 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.253 22.827 59.654 44.33 35.366 38.333 0 49.036 56 46 37 37 0 46 1 1 1 1 0 1 4607 15460 1039 14847 36063 41901 41901 1 NPTFMCLALHCIANVGSR Unmodified 2059.9754 0.97540529 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 11.5 0.5 1 1 77.866 77.866 3 6.1638E-10 20993 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.91 96.965 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 15706 15461 1400 14848 36064;36065 41902;41903 41903 2 NPTFMGLALHCIANVGSR Unmodified 1956.9662 0.96622081 1401 P17427;A0A0J9YUA7 Ap2a2 AP-2 complex subunit alpha-2 yes no 0 0 0 0 11.5 0.5 1 1 75.266 75.266 3 3.1671E-26 19849 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.81 121.95 0 54.264 0 69.827 232.78 0 0 51 0 65 233 0 0 1 0 1 2 0 47632 15462 1401 14849 36066;36067 41904;41905 41905 2 NPTLFIFAENDTVIPLEQVSTLTQK Unmodified 2817.48 0.48002621 2642 Q8R1G2;A0A2I3BPJ4 Cmbl Carboxymethylenebutenolidase homolog yes no 0 0 0 0 8.5 0.5 1 1 100.17 100.17 4 0.003236 35662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.125 20.109 0 20.068 8.8531 0 14.644 9.594 0 19 9 0 14 9 0 2 1 0 1 1 2059.1 15463 2642 14850 36068;36069 41906;41907 41906 2 NPVDYIQGLLDLK Unmodified 1486.8031 0.80314468 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 10 0 2 98.818 98.818 3 0.0022371 32365 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.071 27.244 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15464 3245 14851 36070;36071 41908;41909 41909 2 NPVFDDEEK Unmodified 1091.4771 0.47711909 437 A2A9W7;Q8BMI3;S4R2D2 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 0 0 0 0 4 0 1 51.923 51.923 2 0.0020546 17201 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.869 32.423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15465 437 14852 36072 41910 41910 1 NPVIAQK Unmodified 768.44939 0.4493882 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 8.5 0.5 1 1 43.273 43.273 2 0.019182 10099 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.24 50.679 118.64 90.952 0 80.882 66.371 146.28 111 93 0 74 65 139 2 2 0 1 1 2 39404 15466 2092 14853 36073;36074 41911;41912 41912 2 NPVNLAVLK Unmodified 966.58622 0.58621603 2286 Q7TNB5 Gria1 yes yes 0 0 0 0 9.5 0.5 1 1 65.13 65.13 2 0.00038246 18203 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.02 73.851 277.32 177.05 128.92 206.45 179.19 140.93 260 186 130 199 185 134 2 2 1 2 2 1 28768 15467 2286 14854 36075;36076 41913;41914 41914 2 NPVTIFSLATNEMWR Unmodified 1777.8821 0.88214006 2649 Q9CYR0;Q8R2K3;D3Z3Y3 Ssbp1 Single-stranded DNA-binding protein, mitochondrial;Single-stranded DNA-binding protein yes no 0 0 0 0 12 0 1 92.591 92.591 3 8.8684E-05 26450 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.729 48.171 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 2099.7 15468 2649 14855 36077 41915 41915 1 NPVWYQALTHGLNEEQR Unmodified 2053.997 0.99698689 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 8.5 0.5 1 1 68.785 68.785 3 7.6023E-05 21967 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.764 48.296 59.663 84.289 0 0 112.15 115.13 56 83 0 0 111 111 1 1 0 0 1 1 5923.4 15469 3164 14856 36078;36079 41916;41917 41917 2 NPYYGGESSSITPLEELYK Unmodified 2146.0106 0.010630851 1595 P50396;D6RI86 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 8.43 3.02 1 1 2 1 2 77.238 77.238 3;4 1.0134E-27 28209 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.55 122.66 410.88 358.53 409.43 181.42 259.94 334.23 390 362 399 177 251 314 7 6 5 4 4 5 190550 15470 1595 14857 36080;36081;36082;36083;36084;36085;36086 41918;41919;41920;41921;41922;41923;41924;41925;41926;41927 41920 10 NPYYGGESSSITPLEELYKR Unmodified 2302.1117 0.11174188 1595 P50396;D6RI86 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 1 9.4 3.01 1 1 1 2 69.235 69.235 3;4 2.005E-39 25432 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.9 97.832 217.56 17.545 246.94 47.331 201.8 0 204 19 231 46 195 0 3 1 3 1 2 0 43184 15471 1595 14858 36087;36088;36089;36090;36091 41928;41929;41930;41931;41932 41932 5 NQAEEELIK Unmodified 1072.5401 0.5400537 1157 O08539 Bin1 Myc box-dependent-interacting protein 1 yes yes 0 0 0 0 6 4.97 1 1 1 51.014 51.014 2 0.00051661 16473 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.86 60.983 147.58 144.19 208.6 206.7 204.02 270.27 139 139 204 204 213 259 2 2 2 3 3 3 44718 15472 1157 14859 36092;36093;36094 41933;41934;41935 41935 3 NQAEEELIK Deamidation (N) 1073.5241 0.52406928 1157 O08539 Bin1 Myc box-dependent-interacting protein 1 yes yes 0 1 0 0 2 0 1 54.907 54.907 3 0.026505 18384 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.348 25.028 0 29.792 0 30.275 17.475 29.349 0 28 0 28 19 28 0 1 0 1 1 1 1574.4 15473 1157 14859 36095 41936 41936 307 1 NQALFPACVLK Unmodified 1259.6696 0.66962808 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 9.67 0.471 1 2 70.644 70.644 2;3 6.2442E-07 22964 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.358 55.313 19.927 67.051 45.794 36.851 83.157 57.323 19 65 46 37 83 56 1 2 1 1 2 2 6216.5 15474 2744 14860 36096;36097;36098 41937;41938;41939 41937 3 NQALNTDNYGHDLASVQALQR Unmodified 2327.1254 0.12543488 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.5 3.1 2 1 1 1 1 57.828 57.828 3;4 4.5276E-39 19851 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.49 131.55 88.459 76.923 69.877 120.44 94.991 178.51 83 79 70 114 93 170 2 4 2 4 2 6 80137 15475 551 14861 36099;36100;36101;36102;36103;36104 41940;41941;41942;41943;41944;41945;41946 41946 7 NQAPPGLYTK Unmodified 1087.5662 0.56620887 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 7.5 0.5 1 1 48.857 48.857 2 0.0031474 13922 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.831 42.786 88.486 35.624 95.534 56.321 159.1 104.19 83 37 93 56 158 102 2 1 3 2 3 3 6577.3 15476 1393 14862 36105;36106 41947;41948;41949 41947 3 NQAQEAPPGQA Unmodified 1109.5102 0.51015055 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 1.5 0.5 1 1 33.286 33.286 2 1.6992E-07 8598 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.3 91.063 29.925 0 20.071 43.408 9.0934 18.929 28 0 19 42 9 18 2 0 1 3 1 2 9192.2 15477 2845 14863 36107;36108 41950;41951;41952;41953 41952 4 NQDECVIALHDCNGDVNR Deamidation (N) 2128.8902 0.89021491 83 A0A0H2UH17;A0A0G2JDV6;Q80X50;A0A0G2JGD0;A0A0G2JG47 Ubap2l Ubiquitin-associated protein 2-like yes no 0 1 0 0 3 0 1 47.602 47.602 3 0.0022191 15540 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 49.066 43.016 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15478 83 14864 36109 41954 41954 29 1 NQDGEINR Unmodified 944.43117 0.43117195 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 1 0 1 24.828 24.828 2 0.0075608 4417 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.14 58.069 79.061 0 57.241 66.278 72.05 67.234 74 0 56 65 74 65 1 0 1 1 1 1 15798 15479 2363 14865 36110 41955 41955 1 NQDLALSNLESIPGGYNALR Unmodified 2144.0862 0.08619583 3295 Q9QZM0 Ubqln2 Ubiquilin-2 yes yes 0 0 0 0 9.5 3.5 1 1 76.005 76.005 3 3.1155E-09 28863 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.708 53.389 59.433 73.935 47.438 70.225 43.578 58.452 56 74 46 65 46 56 2 2 1 1 1 2 16844 15480 3295 14866 36111;36112 41956;41957 41957 2 NQDLAPNSAEQASILSLVTK Unmodified 2098.0906 0.090612506 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 6.5 0.5 1 1 81.078 81.078 3 7.9263E-06 29941 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.366 41.967 59.996 18.196 0 40.441 0 39.442 56 19 0 37 0 37 2 1 0 1 0 2 8205.5 15481 2991 14867 36113;36114 41958;41959 41958 2 NQDNLQGWNK Unmodified 1215.5632 0.56324876 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 0 9.5 3.5 1 1 50.273 50.273 2;3 5.4079E-06 16119 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.472 62.058 0 20.216 0 20.767 0 29.848 0 19 0 19 0 28 0 1 0 1 0 1 2529.2 15482 3130 14868 36115;36116 41960;41961 41961 2 NQDPIIPVPLK Unmodified 1232.7129 0.71287311 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 7.5 0.5 1 1 70.092 70.092 3 0.0054736 24009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.528 28.311 118.57 26.032 66.947 36.451 86.818 59.696 111 28 65 37 83 56 2 1 1 1 1 1 12238 15483 2295 14869 36117;36118 41962;41963 41962 2 NQEAVQQLLGR Unmodified 1254.668 0.66804818 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 10.5 2.5 1 1 56.797 56.797 2;3 0.001228 17200 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.942 60.812 108.63 63.127 82.818 108.83 169.27 133.75 102 65 83 107 171 130 2 1 1 2 2 2 13336 15484 2186 14870 36119;36120 41964;41965 41964 2 NQEEFVPDSDDIK Unmodified 1534.6787 0.67873203 959 Q0GNC1;E9QLA5 Inf2 Inverted formin-2 yes no 0 0 0 0 2 0 1 58.936 58.936 3 0.045155 20264 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 38.189 18.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15485 959 14871 36121 41966 41966 1 NQEIPHK Unmodified 864.44537 0.44536545 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 13 0 1 34.812 34.812 3 0.053984 8888 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.849 21.246 108.16 129.25 106.4 121.36 184.05 113.07 102 130 111 120 185 111 1 1 1 1 1 1 4230.7 15486 134 14872 36122 41967 41967 1 NQEQLAAELAEFTAK Unmodified 1661.8261 0.82606496 1453 P26043 Rdx Radixin yes yes 0 0 0 0 9 4 1 1 80.496 80.496 3 1.7186E-05 30995 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.738 55.803 59.862 44.908 0 28 0 88.478 56 46 0 28 0 83 1 1 0 1 0 1 9639.4 15487 1453 14873 36123;36124 41968;41969 41969 2 NQEQLAAELAEFTAK Deamidation (N) 1662.8101 0.81008055 1453 P26043 Rdx Radixin yes yes 0 1 0 0 6 0 1 80.634 80.634 3 0.044505 29776 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.724 21.648 68.993 73.006 64.49 24.952 96.132 0 65 74 65 28 93 0 1 1 1 1 1 0 4450.2 15488 1453 14873 36125 41970 41970 535 1 NQGGYGGSSSSSSYGSGR Unmodified 1693.6928 0.69281896 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 4 0 1 30.411 30.411 3 4.4778E-57 7103 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 171.71 160.33 9.5851 14.25 0 9.837 0 0 9 14 0 9 0 0 1 1 0 1 0 0 3387.1 15489 1586 14874 36126 41971 41971 1 NQGLAGPELVK Unmodified 1124.619 0.61897272 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 6 0 1 55.334 55.334 3 0.00041884 17899 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.29 52.529 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15490 2295 14875 36127 41972 41972 1 NQGPVIPEPVK Unmodified 1176.6503 0.65027285 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 5 0 1 55.044 55.044 3 0.0049944 18357 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.471 18.512 0 38.929 26.284 37.628 66.262 0 0 37 28 37 65 0 0 1 1 1 1 0 5616.7 15491 2295 14876 36128 41973 41973 1 NQGYYDYVKPR Unmodified 1401.6677 0.66771383 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 1 8 0 1 46.916 46.916 3 0.018302 12508 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.863 33.285 48.781 0 97.035 75.099 0 0 46 0 93 74 0 0 1 0 1 1 0 0 4840.9 15492 2074 14877 36129 41974 41974 1 NQHDEKELQAK Unmodified 1338.6528 0.65279205 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 5 0 1 35.826 35.826 4 0.00022458 9120 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.961 69.428 137.55 180.43 172.32 148.05 240.97 216.98 130 181 176 149 244 210 1 1 1 1 1 1 9356.1 15493 1424 14878 36130 41975 41975 1 NQIGDKEK Unmodified 930.47706 0.47705951 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 6 0 1 36.309 36.309 3 0.011509 8923 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.059 25.379 177.11 163.27 211.99 174.86 259.11 170.63 167 168 213 176 261 167 1 1 1 1 1 1 8453.7 15494 1419 14879 36131 41976 41976 1 NQILNLTTDNANILLQIDNAR Unmodified 2366.2554 0.25538642 659 CON__P13645 yes yes 0 0 0 0 8 1 1 1 87.066 87.066 3 1.3505E-08 32012 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.99 55.862 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 1691.9 + 15495 659 14880 36132;36133 41977;41978 41977 2 NQKDEINETDLK Unmodified 1445.6998 0.69980182 1348 P10852;A0A0U1RP98;A0A0U1RPL8 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 7 4.24 2 1 46.974 46.974 3;4 0.00028431 14422 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.271 51.221 118.53 136.23 221.58 133.03 225.12 95.759 111 130 213 129 222 93 1 2 2 2 2 1 22994 15496 1348 14881 36134;36135;36136 41979;41980;41981 41981 3 NQLDQEVEFLSTSIAQLK Unmodified 2062.0582 0.058249746 3326 Q9WU28;H7BWX1 Pfdn5 Prefoldin subunit 5 yes no 0 0 0 0 8.67 3.09 1 1 1 98.345 98.345 3 7.5038E-08 36821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.88 83.492 26.711 0 19.143 29.463 5.9523 9.4241 25 0 19 28 6 9 2 0 1 1 1 1 7061.8 15497 3326 14882 36137;36138;36139 41982;41983;41984 41982 3 NQLLEQFPGIEPWLNQIMPK Unmodified 2394.2406 0.24058798 3111 Q9DB27 Mcts1 Malignant T-cell-amplified sequence 1 yes yes 0 0 0 0 10 0 1 101.34 101.34 4 0.033287 32871 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.767 16.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1414.6 15498 3111 14883 36140 41985 41985 1 NQLLLEFSFWNEPQPR Unmodified 2017.0058 0.005760665 1237 O55125 Nipsnap1 Protein NipSnap homolog 1 yes yes 0 0 0 0 9 0 2 90.623 90.623 3 0.0057239 32190 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.382 29.245 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 1400.1 15499 1237 14884 36141;36142 41986;41987 41987 2 NQNDPLPGR Unmodified 1009.4941 0.49410656 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 3.5 0.5 1 1 35.72 35.72 2 0.016708 10020 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.993 35.152 0 49.41 35.801 28.47 28 39.442 0 47 37 28 28 37 0 1 1 1 1 1 6721.7 15500 2566 14885 36143;36144 41988;41989 41988 2 NQPDTSTR Unmodified 917.42027 0.42027292 1632 P56213 Gfer FAD-linked sulfhydryl oxidase ALR yes yes 0 0 0 0 3 0 1 20.957 20.957 2 0.010851 3441 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.815 57.577 9.5288 8.6965 14.178 8.992 0 5.33 9 9 14 9 0 5 1 1 1 1 0 1 1310.6 15501 1632 14886 36145 41990 41990 1 NQPEVDMSDR Unmodified 1189.5034 0.50335062 527 A2AUR7;Q9D031;Q01730;E0CXG5;A0A0A6YWZ2;B1AYQ0 Rsu1 Ras suppressor protein 1 yes no 0 0 0 0 2 0 1 38.298 38.298 2 0.065101 11067 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.194 33.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15502 527 14887 36146 41991 41991 1 NQPSPQAGLAGPGPAGYGAAR Unmodified 1935.9551 0.95512208 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8;F7CD11 Synj1 Synaptojanin-1 yes no 0 0 0 0 5.5 0.5 1 1 48.695 48.695 3 2.134E-11 14738 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.316 61.478 88.859 5.5985 28.89 28.179 37.408 0 83 9 28 28 37 0 2 1 1 1 1 0 12333 15503 927 14888 36147;36148 41992;41993 41993 2 NQPSPQAGLAGPGPAGYGAARPTIPAR Unmodified 2571.3306 0.33061705 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8;F7CD11 Synj1 Synaptojanin-1 yes no 0 0 0 1 7 0 1 51.707 51.707 4 1.4498E-11 15328 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.502 49.574 29.587 36.608 45.768 37.219 26.249 38.693 28 37 46 37 28 37 1 1 1 1 1 1 3468.7 15504 927 14889 36149 41994 41994 1 NQQEGVCPEGSIDNSPVK Unmodified 1956.8847 0.88471883 2797 Q921I1;E9Q035 Tf;Gm20425 Serotransferrin yes no 0 0 0 0 3.5 0.5 1 1 50.157 50.157 3 2.7285E-07 16795 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 96.26 77.896 24.329 31.876 50.578 57.659 28.446 20.254 23 32 51 56 28 19 1 1 2 2 1 1 12589 15505 2797 14890 36150;36151 41995;41996 41995 2 NQQITHANNTVSSFK Unmodified 1687.8278 0.8277963 2137 Q61699;E9Q0U7;D3Z027 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 7 0 1 44.022 44.022 3 1.3569E-18 11757 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.14 103.6 24.462 43.039 0 30.025 30.768 38.564 23 42 0 28 32 37 1 1 0 1 1 1 4341.7 15506 2137 14891 36152 41997 41997 1 NQQQVPHPAISGNIWAALR Unmodified 2099.1025 0.10245502 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 9 0 1 65.656 65.656 3 4.8225E-06 20601 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.167 44.86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15507 721 14892 36153 41998 41998 1 NQSIIVSGESGAGK Unmodified 1345.6838 0.68375782 728 D3YZ62;D3Z4J3;Q99104;E9Q1F5;G5E8G6;G3X9Y9;P21271;A0A1L1SUF0;D3Z135 Myo5a;Myo5c;Myo5b Unconventional myosin-Va;Unconventional myosin-Vb yes no 0 0 0 0 6 0 1 48.543 48.543 3 0.00062288 14624 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.675 50.322 78.635 62.589 75.916 0 83.862 86.085 74 65 74 0 83 83 1 1 1 0 1 1 5930.5 15508 728 14893 36154 41999 41999 1 NQSPVVLGPIK Unmodified 1150.671 0.67100829 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8 0.816 1 1 1 59.994 59.994 2 5.2016E-08 18601 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.69 74.784 58.656 0 140.36 0 36.688 137.53 55 0 130 0 37 130 1 0 3 0 1 3 12404 15509 2295 14894 36155;36156;36157 42000;42001;42002 42001 3 NQSPVVPASTK Unmodified 1126.5982 0.59823728 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 6 0 1 42.335 42.335 2 0.027801 11790 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.567 20.625 0 0 8.8602 19.705 28.383 0 0 0 9 19 28 0 0 0 1 1 1 0 2411.8 15510 2295 14895 36158 42003 42003 1 NQTAEKEEFEHQQK Unmodified 1744.8016 0.80164113 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 6.2 3.54 1 1 1 1 1 39.529 39.529 4 8.5051E-22 11631 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 140.1 88.956 1738.7 2019.9 1615.5 1357.1 2251 2670.1 1637 2034 1624 1339 2277 2565 6 7 5 5 5 7 204630 15511 1762 14896 36159;36160;36161;36162;36163 42004;42005;42006;42007;42008;42009;42010 42006 7 NQTLTDWLLDAPK Unmodified 1513.7777 0.77765821 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7;A0A338P6V7 Synj1 Synaptojanin-1 yes no 0 0 0 0 9.33 2.62 1 1 1 83.096 83.096 3 3.2059E-05 30170 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.531 69.508 99.053 123.94 130.49 136.65 118.29 137.04 93 121 130 130 121 130 2 2 2 2 2 2 31615 15512 927 14897 36164;36165;36166 42011;42012;42013 42011 3 NQVALNPQNTVFDAK Unmodified 1657.8424 0.84238373 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 6.5 0.5 1 1 63.15 63.15 3 4.0387E-05 21591 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.529 47.996 78.664 35.635 93.812 96.058 0 49.036 74 37 93 93 0 46 2 1 2 2 0 1 12930 15513 1407 14898 36167;36168 42014;42015 42014 2 NQVAMNPQNTVFDAK Oxidation (M) 1691.7937 0.79371898 1394 P16627 Hspa1l Heat shock 70 kDa protein 1-like yes yes 0 0 1 0 6 0.816 1 1 1 57.152 57.152 3 8.84E-05 17894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.692 45.544 88.692 102.1 63.859 184.58 211.82 124.83 83 102 65 176 213 120 1 2 2 3 2 1 32177 15514 1394 14899 36169;36170;36171 42016;42017;42018 42018 86 3 NQVAMNPTNTIFDAK Unmodified 1662.8036 0.80355538 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 7 0 1 66.388 66.388 3 9.5849E-06 22225 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.932 57.059 49.128 45.631 0 50.278 0 0 46 46 0 46 0 0 1 1 0 1 0 0 3764.6 15515 1397 14900 36172 42019 42019 1 NQVAMNPTNTVFDAK Unmodified 1648.7879 0.78790532 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.5 2.69 1 1 1 1 61.861 61.861 2;3 1.3273E-32 20230 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 169.98 137.48 569.01 512.47 591.49 658.04 447.15 787.55 534 527 578 642 456 750 3 5 4 5 3 4 105290 15516 1762 14901 36173;36174;36175;36176 42020;42021;42022;42023;42024;42025 42022 6 NQVDDIR Unmodified 858.41954 0.41954463 2306 Q80TZ3;B1B0B8;B1B0B7 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 5.5 4.39 1 1 1 1 33.802 33.802 2 0.019894 9207 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.29 9.6985 128.47 181.59 219.31 210.18 177.25 99.138 121 176 214 204 176 93 2 2 3 3 2 2 51738 15517 2306 14902 36177;36178;36179;36180 42026;42027;42028;42029 42027 4 NQVFEAK Unmodified 834.42357 0.42356738 696 D3YVP5;Q80W21 Gstm7 Glutathione S-transferase Mu 7 yes no 0 0 0 0 6 0 1 46.817 46.817 2 0.027413 13836 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.302 45.799 89.059 0 0 68.431 138.98 95.172 83 0 0 65 139 93 1 0 0 1 1 1 4832.3 15518 696 14903 36181 42030 42030 1 NQVTATK Unmodified 760.40792 0.40791731 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 33.183 33.183 2 0.022984 8021 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.56 47.553 276.43 281.4 240.47 164.72 283.78 260.29 260 278 241 157 278 250 3 3 3 2 3 3 48620 15519 1164 14904 36182;36183;36184;36185 42031;42032;42033;42034 42034 4 NQWIDNVEK Unmodified 1144.5513 0.55128709 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 6 0 1 57.915 57.915 3 0.011082 19111 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.584 21.175 39.293 0 68.549 35.525 44.148 68.03 37 0 65 37 46 65 1 0 1 1 1 1 2545.4 15520 2182 14905 36186 42035 42035 1 NQWQLSADDLK Unmodified 1316.6361 0.63607935 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 8 3.56 1 1 1 64.644 64.644 2;3 6.7464E-15 23228 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 161.19 107.42 129.24 81.611 68.543 36.728 250.4 0 121 83 65 37 241 0 2 1 2 1 3 0 30692 15521 1390 14906 36187;36188;36189 42036;42037;42038 42038 3 NQWQLSADDLKK Unmodified 1444.731 0.73104237 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 8.8 2.23 2 1 1 1 59.69 59.69 3;4 4.2999E-18 20745 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.67 113.67 1072.7 1173.5 1213.5 495.99 1851.1 1996 1009 1190 1212 505 1857 1922 4 5 5 2 5 5 176280 15522 1390 14907 36190;36191;36192;36193;36194 42039;42040;42041;42042;42043 42043 5 NQYDNDVTVWSPQGR Unmodified 1777.802 0.80197548 3313 Q9R1P4 Psma1 Proteasome subunit alpha type-1 yes yes 0 0 0 0 4.5 0.5 1 1 57.327 57.327 2;3 0.00040049 19408 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.565 52.874 0 67.352 73.674 64.936 91.346 85.871 0 65 74 65 93 83 0 2 1 1 1 1 5696.9 15523 3313 14908 36195;36196 42044;42045 42045 2 NRAPDSGAEVER Unmodified 1299.6167 0.61674089 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 5.33 5.44 1 1 1 25.002 25.002 3 5.197E-05 4930 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.688 59.036 19.966 27.656 110.89 45.866 85.424 47.971 19 28 106 47 84 46 1 1 3 2 2 1 16439 15524 510 14909 36197;36198;36199 42046;42047;42048 42047 3 NRDEDPTLLWQVFGSATGLAR Unmodified 2345.1764 0.17640782 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 1 8 0 1 88.895 88.895 3 0.0018432 32155 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.888 19.34 33.108 30.752 0 0 36.798 55.448 31 31 0 0 37 53 1 1 0 0 1 1 2549.3 15525 882 14910 36200 42049 42049 1 NRDEGSYHVDESR Unmodified 1562.671 0.67096131 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97;G3UWQ9;A0A140LI71 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 1 1 0 1 25.046 25.046 4 0.0090384 4545 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.298 30.469 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 2050.6 15526 2968 14911 36201 42050 42050 1 NRHPNFLVVEK Unmodified 1351.7361 0.73606817 3042 Q9D1K2 Atp6v1f V-type proton ATPase subunit F yes yes 0 0 0 1 8.5 0.5 1 1 45.879 45.879 4 0.017097 11070 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.5 16.276 257.4 138.73 83.116 175.85 91.784 98.072 241 148 83 167 93 92 2 2 1 2 1 1 10819 15527 3042 14912 36202;36203 42051;42052 42052 2 NRISMIPPK Oxidation (M);Deamidation (N) 1071.5747 0.57466507 621 B2RRI5;Q52KR2 Lrig2 Leucine-rich repeats and immunoglobulin-like domains protein 2 yes no 0 1 1 1 11 0 1 63.234 63.234 3 0.028196 17087 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.676 17.952 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 2486.8 15528 621 14913 36204 42053 42053 179 28 1 NRLEEVSPNLVR Unmodified 1424.7736 0.77357588 2736 Q91VD9;A0A087WQ77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 1 5 0 1 47.152 47.152 3 2.6776E-08 14457 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.99 97.458 20.002 47.182 24.74 58.904 44.099 38.184 19 46 28 56 46 37 1 1 1 1 1 1 20884 15529 2736 14914 36205 42054 42054 1 NRPGNALEK Deamidation (N) 998.51451 0.51450765 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 1 5 0 1 35.426 35.426 3 0.04462 8935 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.542 28.972 88.692 72.756 0 0 64.319 106.9 83 74 0 0 65 102 1 1 0 0 1 1 7593.2 15530 2998 14915 36206 42055 42055 1045 1 NRPGNALEK Unmodified 997.53049 0.53049207 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 1 9.33 2.62 1 1 1 32.748 32.748 3 0.0029643 6673 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.622 57.449 531.23 274.88 291.86 377.29 52.214 554.96 498 291 290 362 56 522 3 2 2 3 1 3 76716 15531 2998 14915 36207;36208;36209 42056;42057;42058 42056 3 NRPGPQTR Unmodified 924.48896 0.4889616 156 A0A0R4J049;Q8CIG8 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 1 6 0.816 1 1 1 17.672 17.672 3 0.007978 2521 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.177 32.166 31.98 18.101 19.901 35.324 34.64 10.125 30 19 21 34 35 10 3 2 3 3 3 2 2678.8 15532 156 14916 36210;36211;36212 42059;42060;42061 42059 3 NRPGSLDK Unmodified 885.46683 0.46682918 504 D3Z781;E9QAU4;A2AQ25 Etl4;Skt Sickle tail protein yes no 0 0 0 1 6 0 1 31.735 31.735 3 0.053171 6744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.563 3.393 48.955 35.437 37.661 0 56.948 47.411 46 37 37 0 56 46 1 1 1 0 1 1 2849.6 15533 504 14917 36213 42062 42062 1 NRPSFDAILYYYQSGGR Unmodified 2005.9646 0.96462413 1775;1392 P63141;P16388 Kcna2;Kcna1 Potassium voltage-gated channel subfamily A member 2;Potassium voltage-gated channel subfamily A member 1 no no 0 0 0 1 10 0 1 70.694 70.694 3 0.00062762 20892 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.053 40.479 0 0 0 0 47.137 28.503 0 0 0 0 46 28 0 0 0 0 1 1 4335.6 15534 1775;1392 14918 36214 42063 42063 1 NSAAYHSK Unmodified 876.40898 0.40897995 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 7.5 0.5 1 1 25.805 25.805 3 0.0032544 3973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.525 44.049 70.244 55.101 49.739 72.451 58.186 97.478 66 56 51 70 60 93 2 1 1 2 1 2 5497.7 15535 607 14919 36215;36216 42064;42065 42064 2 NSAEETWMVIHGR Unmodified 1528.7093 0.70926107 2946 Q9CQX2 Cyb5b Cytochrome b5 type B yes yes 0 0 0 0 5.5 0.5 1 1 53.229 53.229 3 9.1429E-05 16823 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.499 69.783 99.326 0 77.867 38.168 58.576 39.442 93 0 74 37 56 37 2 0 2 1 1 1 9143.1 15536 2946 14920 36217;36218 42066;42067 42067 2 NSAESDGMR Unmodified 965.38726 0.38725823 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 1 0 1 24.545 24.545 2 2.4654E-08 4329 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 166.66 128.24 45.644 38.639 50.47 0 0 59.696 43 40 49 0 0 56 1 1 1 0 0 1 6797 15537 1967 14921 36219 42068 42068 1 NSAISFDNSGIQYR Unmodified 1570.7376 0.73758431 1011 Q8C446;F6ZYH6;P63080 Gabrb3 Gamma-aminobutyric acid receptor subunit beta-3 yes no 0 0 0 0 13 0 1 57.643 57.643 3 0.049515 20018 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 33.44 18.749 48.906 0 76.042 84.842 71.527 57.655 46 0 74 83 74 56 1 0 1 1 1 1 4488.4 15538 1011 14922 36220 42069 42069 1 NSCISGER Unmodified 921.39743 0.39742898 2709;944 Q8VED9;E9QAC6 Lgalsl;Pick1 Galectin-related protein;Galectin no no 0 0 0 0 4 0.816 1 1 1 26.08 26.08 2 0.0074756 4726 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.36 58.523 84.098 54.675 66.157 68.475 22.672 0 79 56 65 65 23 0 3 2 2 2 1 0 11902 15539 2709;944 14923 36221;36222;36223 42070;42071;42072 42072 3 NSDGSFR Unmodified 781.33548 0.33548065 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 3.5 0.5 1 1 27.526 27.526 2 0.026426 6255 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.442 54.675 108.59 0 143.87 37.182 90.387 150.92 102 0 135 37 93 144 2 0 2 1 2 2 25825 15540 1096 14924 36224;36225 42073;42074 42073 2 NSDRTPLVSVLLEGPPHSGK Unmodified 2102.112 0.11201665 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 8 0 1 63.373 63.373 4 0.0015183 20090 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.198 24.123 87.967 110.67 89.739 85.371 0 187.62 83 111 93 83 0 176 1 1 1 1 0 1 16517 15541 1554 14925 36226 42075 42075 1 NSEELGNTEEK Unmodified 1248.547 0.54698957 2451 Q8BRR9;Q61481 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 2.5 0.5 1 1 39.845 39.845 2 4.3219E-11 11960 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 142.97 103.95 29.587 84.966 80.811 84.146 93.413 0 28 83 83 83 93 0 1 2 2 2 2 0 7144 15542 2451 14926 36227;36228 42076;42077 42077 2 NSEPAAR Unmodified 743.35622 0.3562161 431 A2A6U3;Q80UG5 Sept9 Septin-9 yes no 0 0 0 0 2 0 1 18.496 18.496 2 0.016609 2840 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.65 42.555 20.169 43.328 0 57.97 55.913 0 19 42 0 54 56 0 1 1 0 1 1 0 3795.4 15543 431 14927 36229 42078 42078 1 NSEPEEVIPSR Unmodified 1255.6044 0.60444487 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 1.75 0.829 2 1 1 43.617 43.617 2;3 1.0258E-07 13360 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.42 73.398 49.739 57.136 85.01 116.33 54.094 38.951 47 56 84 112 56 37 2 2 2 3 2 1 18027 15544 432 14928 36230;36231;36232;36233 42079;42080;42081;42082 42081 4 NSEQIMEVGEELINDYASK Unmodified 2167.9943 0.99432886 2966 Q9CRD2 Emc2 ER membrane protein complex subunit 2 yes yes 0 0 0 0 5 0 1 94.929 94.929 3 0.063959 35385 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 27.72 17.085 5.365 0 0 0 5.23 0 5 0 0 0 5 0 1 0 0 0 1 0 958.57 15545 2966 14929 36234 42083 42083 1 NSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLK Unmodified 3807.0935 0.093460045 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 10 0.816 1 1 1 94.886 94.886 4;5 9.0766E-08 30790 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.369 35.148 20.292 18.848 55 20.608 8.4674 0 19 19 55 19 9 0 1 1 2 1 1 0 9000.7 15546 1203 14930 36235;36236;36237 42084;42085;42086 42086 3 NSGMPPGAAAIAVLPVTLDTPMNR Unmodified 2392.2243 0.22428599 2464 Q8BVI4;D3YWR7;A0A0G2JGY0 Qdpr Dihydropteridine reductase yes no 0 0 0 0 8.5 0.5 1 1 85.402 85.402 3 2.0976E-10 30657 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.778 55.475 20.387 0 0 0 28.291 38.635 19 0 0 0 28 37 1 0 0 0 1 2 4718.8 15547 2464 14931 36238;36239 42087;42088 42087 2 NSGVLFENQLLQIGVK Unmodified 1757.9676 0.96758424 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 8 0 1 83.636 83.636 2 0.01526 29701 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.069 30.44 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1835.1 15548 1400 14932 36240 42089 42089 1 NSGVLFENQLLQIGVK Deamidation (N) 1758.9516 0.95159983 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 1 0 0 8 0 1 83.699 83.699 3 0.027922 29748 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.412 21.031 0 0 0 48.527 93.09 57.04 0 0 0 46 93 56 0 0 0 1 1 1 5166.5 15549 1400 14932 36241 42090 42090 496 1 NSGYDTEPEIIEETNVDR Unmodified 2079.9233 0.92327241 390 F6ZGR6;D3YZ21;A0A2R8VHF1;A0A2R8VKG2 D430041D05Rik yes no 0 0 0 0 1.5 0.5 1 1 59.646 59.646 3 7.0485E-09 19434 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.75 89.452 20.387 8.7527 49.247 0 59.001 18.071 19 9 46 0 57 18 1 1 1 0 3 2 9272.1 15550 390 14933 36242;36243 42091;42092;42093 42092 3 NSIEFFEEISDEASK Unmodified 1743.7839 0.78392538 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 83.47 83.47 3 0.00083999 31635 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.148 37.824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15551 3449;3451 14934 36244 42094 42094 1 NSIFQLMIHTLDPLAEGR Unmodified 2054.0619 0.061895335 1902 Q14BI1;B1AXF3 Slc24a2 yes no 0 0 0 0 10.5 0.5 1 1 98.101 98.101 3 8.3613E-07 32198 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.55 51.125 0 78.736 0 0 76.764 18.631 0 74 0 0 74 19 0 2 0 0 2 1 7897.6 15552 1902 14935 36245;36246 42095;42096 42096 2 NSILAQVLDQSAR Unmodified 1413.7576 0.75759147 1645 P56812;D3Z7Q5 Pdcd5 Programmed cell death protein 5 yes no 0 0 0 0 9 0 1 73.946 73.946 2 0.00013815 24464 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.69 62.214 48.79 44.69 57.665 0 0 0 46 46 56 0 0 0 1 1 1 0 0 0 5645.4 15553 1645 14936 36247 42097 42097 1 NSITVPYK Unmodified 920.49673 0.49673232 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 0 9.2 2.04 1 1 2 1 53.194 53.194 2;3 0.0012828 14656 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.48 95.11 654.87 391.99 692.72 364.2 591.17 470.27 616 408 680 365 585 450 5 4 5 4 3 4 78283 15554 1542 14937 36248;36249;36250;36251;36252 42098;42099;42100;42101;42102 42101 5 NSITVPYKVWAK Unmodified 1404.7765 0.776536 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 1 11 0 1 64.075 64.075 3 0.00028415 17415 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.274 48.427 124.47 0 0 110.03 77.58 0 116 0 0 102 79 0 1 0 0 1 1 0 6962.1 15555 1542 14938 36253 42103 42103 1 NSLDCEIVSAK Unmodified 1234.5864 0.58635197 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 6.6 3.26 1 2 1 1 56.1 56.1 2;3 1.6421E-17 18921 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 140.14 90.426 139.06 75.949 95.635 38.073 104.28 96.178 130 74 92 38 102 92 3 2 2 2 2 2 30812 15556 1536 14939 36254;36255;36256;36257;36258 42104;42105;42106;42107;42108 42108 5 NSLESYAFNMK Unmodified 1302.5914 0.59143734 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.33 2.29 1 2 1 1 1 67.752 67.752 2;3 4.1974E-09 22741 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.16 98.936 147.38 162.67 503.72 139.5 474.65 124.8 139 158 481 140 464 121 2 3 5 3 5 2 97099 15557 1762 14940 36259;36260;36261;36262;36263;36264 42109;42110;42111;42112;42113;42114 42110 6 NSLESYAFNMK Deamidation (N) 1303.5755 0.57545293 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 1 0 0 6 0 1 69.795 69.795 3 0.036488 24673 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.081 27.035 29.724 17.563 38.83 0 37.714 28.772 28 19 37 0 37 28 1 1 1 0 1 1 1961.7 15558 1762 14940 36265 42115 42115 693 1 NSLFGSVETWPWQVLSTGGK Unmodified 2192.0902 0.090218576 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 0 11.2 1.33 1 2 1 1 97.571 97.571 3;4 7.9769E-11 31951 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.975 63.441 19 0 0 0 0 130 19 0 0 0 0 130 1 0 0 0 0 1 26366 15559 241 14941 36266;36267;36268;36269;36270 42116;42117;42118;42119;42120;42121 42119 6 NSLFGSVETWPWQVLSTGGK Deamidation (N) 2193.0742 0.074234161 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 1 0 0 9 0 1 102.38 102.38 3 5.1546E-06 36315 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.136 45.37 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 1569.9 15560 241 14941 36271 42122 42122 78 1 NSLISYLEQIHR Unmodified 1471.7783 0.77832691 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 9.5 0.5 1 1 71.209 71.209 3 1.5976E-13 23065 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.54 96.018 0 48.944 0 0 37.384 75.375 0 46 0 0 37 74 0 1 0 0 1 2 22893 15561 1868 14942 36272;36273 42123;42124 42123 2 NSLLNEDLEK Deamidation (N) 1174.5717 0.57174776 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 0 1 0 0 3 0 1 63.403 63.403 3 0.01459 22790 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.676 25.299 0 20.216 0 40.121 17.023 29.362 0 19 0 37 19 28 0 1 0 1 1 1 2851 15562 2133 14943 36274 42125 42125 834 1 NSLLNEDLEK Unmodified 1173.5877 0.58773217 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 0 0 0 0 7 3.54 1 1 1 1 59.491 59.491 2;3 1.2418E-08 20585 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 149.94 90.347 277.58 168.04 474.2 155.54 253.26 370.48 261 176 455 158 250 352 4 3 5 2 3 5 98446 15563 2133 14943 36275;36276;36277;36278 42126;42127;42128;42129;42130;42131 42127 6 NSLPDSVQIR Unmodified 1127.5935 0.59348625 1239 O55135;A6PWZ2 Eif6 Eukaryotic translation initiation factor 6 yes no 0 0 0 0 5.5 0.5 1 1 50.685 50.685 2 0.0091848 16365 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.726 36.652 70.461 25.776 38.235 0 66.993 29.041 66 28 37 0 65 28 2 1 1 0 2 1 4559.5 15564 1239 14944 36279;36280 42132;42133 42132 2 NSLQEQQEEEEEARK Unmodified 1845.8341 0.83406347 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 2.5 0.5 1 1 38.114 38.114 3 3.6555E-05 11008 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.664 62.873 39.469 20.216 39.036 17.93 65.838 38.668 37 19 37 19 65 37 1 1 1 1 2 1 4858.7 15565 1974 14945 36281;36282 42134;42135 42134 2 NSLQQGDVDGAQR Unmodified 1386.6488 0.6487693 817 E9PUL5;A0A0J9YU72 Prrt2 Proline-rich transmembrane protein 2 yes no 0 0 0 0 3.5 0.5 2 2 35.308 35.308 2;3 2.0478E-07 9842 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.79 67.599 0 38.891 79.391 0 95.285 87.891 0 37 75 0 93 85 0 2 3 0 3 4 10605 15566 817 14946 36283;36284;36285;36286 42136;42137;42138;42139 42137 4 NSLQQPEGIDR Deamidation (N) 1256.5997 0.59969384 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 1 0 0 2 0 1 44.269 44.269 2 0.042057 13649 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.121 19.772 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15567 2451 14947 36287 42140 42140 928 1 NSLQQPEGIDR Unmodified 1255.6157 0.61567826 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 3.5 0.5 1 1 41.02 41.02 2 5.3726E-08 12506 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.96 69.374 0 34.655 27.364 19.136 0 0 0 33 28 19 0 0 0 1 1 1 0 0 9043.3 15568 2451 14947 36288;36289 42141;42142 42141 2 NSNILEDLETLR Unmodified 1415.7256 0.72562264 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 4.5 0.5 1 1 79.736 79.736 2;3 0.00022642 30010 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.563 45.242 39.265 0 20.456 0 9.0934 9.3345 38 0 19 0 9 9 2 0 1 0 1 1 2740.8 15569 2073 14948 36290;36291 42143;42144 42144 2 NSNSDGWESWEGASGEGR Unmodified 1923.762 0.76196116 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 2 0 1 55.66 55.66 3 3.176E-05 18803 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.784 55.587 0 0 20.558 0 28.62 19.437 0 0 19 0 28 19 0 0 1 0 1 1 2917.7 15570 3453 14949 36292 42145 42145 1 NSPAFLSTDLGDEDVGLGPPAPR Unmodified 2324.1285 0.12845458 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 4 0 1 76.215 76.215 3 4.3061E-10 28219 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.979 49.26 0 19.008 8.5975 0 28.62 19.437 0 18 9 0 28 19 0 1 1 0 1 1 2435.3 15571 2343 14950 36293 42146 42146 1 NSPINTK Unmodified 772.40792 0.40791731 3090 Q9D898 Arpc5l Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 6.5 0.5 1 1 37.793 37.793 2 0.017476 8795 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.698 46.574 108.98 91.603 0 0 103.06 105.79 102 93 0 0 102 102 1 1 0 0 1 1 7321.8 15572 3090 14951 36294;36295 42147;42148 42148 2 NSPLVSR Unmodified 771.4239 0.42390173 1327 P08249;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 34.496 34.496 2 0.0055572 8591 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.27 34.984 878.41 696.34 555.84 694.81 755.67 997.53 825 714 551 679 771 956 4 3 3 4 3 4 460520 15573 1327 14952 36296;36297;36298;36299 42149;42150;42151;42152 42152 4 NSQEDLQDR Unmodified 1103.4843 0.48432973 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 0 13 0 1 28.462 28.462 2 0.00069168 5868 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.91 20.326 0 29.017 46.353 37.678 0 0 0 28 46 37 0 0 0 1 1 1 0 0 4615.9 15574 450 14953 36300 42153 42153 1 NSQGEEVAQR Unmodified 1116.516 0.51596421 1379 P14733 Lmnb1 Lamin-B1 yes yes 0 0 0 0 5.33 5.44 1 1 1 24.71 24.71 2 3.9528E-61 4362 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 217.45 148.83 88.448 43.442 125.43 152.02 150.28 86.048 83 42 125 148 153 84 2 2 3 2 2 2 39650 15575 1379 14954 36301;36302;36303 42154;42155;42156 42154 3 NSQLEQENNLLK Unmodified 1428.7209 0.72087161 746 D3Z0V7;E9QLZ1;P62500;H3BLI9;D3YW86 Tsc22d1 TSC22 domain family protein 1 yes no 0 0 0 0 7.33 4.03 1 1 1 54.515 54.515 3 0.0014624 18208 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.831 17.291 167.92 29.792 271.77 195.4 149.82 234.32 158 28 260 195 148 222 2 1 2 2 2 2 21945 15576 746 14955 36304;36305;36306 42157;42158;42159 42158 3 NSQSFFSGLFGGSSK Unmodified 1548.7209 0.72087161 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 11 0.816 1 1 1 78.722 78.722 3 2.5525E-05 24127 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 99.055 78.392 148 86.788 173.17 119.81 54.499 252.15 139 87 167 120 56 238 2 2 2 2 1 3 105210 15577 3106 14956 36307;36308;36309 42160;42161;42162;42163;42164 42163 5 NSQSFFSGLFGGSSK Deamidation (N) 1549.7049 0.7048872 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 1 0 0 10 0 2 83.82 83.82 3 0.0012675 27442 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.454 42.823 49.87 85.085 55.544 46.102 45.998 34.112 47 84 56 46 46 32 1 2 1 1 1 1 6584.1 15578 3106 14956 36310;36311 42165;42166 42166 1076 2 NSRPEANEALER Deamidation (N) 1385.6535 0.65352033 3273 Q9QYB1 Clic4 Chloride intracellular channel protein 4 yes yes 0 1 0 1 1.5 0.5 1 1 32.929 32.929 3 0.0010132 8041 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.565 36.801 69.026 53.67 113.74 62.75 80.61 96.838 65 56 111 65 83 93 1 1 2 2 2 2 10642 15579 3273 14957 36312;36313 42167;42168 42167 1121 2 NSRPEANEALER Unmodified 1384.6695 0.66950474 3273 Q9QYB1 Clic4 Chloride intracellular channel protein 4 yes yes 0 0 0 1 7.5 5.5 1 1 29.34 29.34 3 2.8375E-08 6852 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.86 73.532 29.597 46.349 96.45 27.971 100.78 134.64 28 46 93 28 102 129 1 1 2 1 2 2 25283 15580 3273 14957 36314;36315 42169;42170 42169 2 NSSAITSPK Deamidation (N) 904.45018 0.45017606 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 1 0 0 5.5 0.5 1 1 41.412 41.412 2 0.01406 11347 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.79 61.228 59.21 63.603 93.595 65.467 0 0 56 65 93 65 0 0 1 1 1 1 0 0 4742.7 15581 1475 14958 36316;36317 42171;42172 42172 544 2 NSSAITSPK Unmodified 903.46616 0.46616048 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 9.17 2.79 1 1 2 2 38.579 38.579 2;3 0.00081972 8586 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.97 69.656 387.78 345.9 655.71 536.3 672.63 590.81 365 351 645 538 686 565 4 4 5 6 6 5 74986 15582 1475 14958 36318;36319;36320;36321;36322;36323 42173;42174;42175;42176;42177;42178 42175 6 NSSFLEQNK Unmodified 1065.5091 0.50908792 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 7 0 1 48.902 48.902 2 0.0084265 14014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.379 42.571 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 1986.1 15583 860 14959 36324 42179 42179 1 NSSGPVPTLPEGITVAYTVPK Unmodified 2126.1259 0.12593538 2704 Q8VE47 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes yes 0 0 0 0 7 0 1 77.005 77.005 3 0.047343 27145 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 28.868 12.925 20.267 0 20.087 8.2859 18.816 19.717 19 0 19 9 19 19 1 0 1 1 1 1 2470.7 15584 2704 14960 36325 42180 42180 1 NSSNTADITI Unmodified 1034.488 0.48801813 2713 Q8VEK0;D3YVV1 Tmem30a Cell cycle control protein 50A yes no 0 0 0 0 3 0 1 56.723 56.723 2 0.00087714 19780 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.594 44.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15585 2713 14961 36326 42181 42181 1 NSSVGLIQLNRPK Unmodified 1424.81 0.80996139 2401 Q8BH95 Echs1 Enoyl-CoA hydratase, mitochondrial yes yes 0 0 0 1 10 0 1 51.945 51.945 4 0.00012495 12426 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.856 76.719 118.47 0 106.07 82.879 80.71 66.987 111 0 102 83 83 65 1 0 1 1 1 1 6752.4 15586 2401 14962 36327 42182 42182 1 NSSYFVEWIPNNVK Unmodified 1695.8257 0.82567103 1795;2283;1863;2975;3072;3183;2805 P99024;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 0 0 0 8.77 2.97 1 1 1 3 1 2 2 1 1 78.087 78.087 2;3;4 1.1945E-11 29847 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 122.66 96.532 3284.2 2706.5 2875.4 3092.6 2473.7 2845.4 3090 2776 2906 3019 2508 2715 17 13 12 15 11 12 1912500 15587 1863;1795;2283;2805;2975;3072;3183 14963 36328;36329;36330;36331;36332;36333;36334;36335;36336;36337;36338;36339;36340 42183;42184;42185;42186;42187;42188;42189;42190;42191;42192;42193;42194;42195;42196;42197;42198;42199;42200 42199 18 NSSYFVEWIPNNVK Deamidation (N) 1696.8097 0.80968662 1795;2283;1863;2975;3072;3183;2805 P99024;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 1 0 0 8.63 2.77 1 6 8 5 2 8 80.603 80.603 2;3;4 1.9473E-40 30330 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 188.27 159.18 2109.2 2091.4 2287.6 2114.7 2708.7 2305.6 1983 2092 2254 2061 2722 2216 27 27 30 27 28 23 1363100 15588 1863;1795;2283;2805;2975;3072;3183 14963 36341;36342;36343;36344;36345;36346;36347;36348;36349;36350;36351;36352;36353;36354;36355;36356;36357;36358;36359;36360;36361;36362;36363;36364;36365;36366;36367;36368;36369;36370 42201;42202;42203;42204;42205;42206;42207;42208;42209;42210;42211;42212;42213;42214;42215;42216;42217;42218;42219;42220;42221;42222;42223;42224;42225;42226;42227;42228;42229;42230;42231;42232;42233;42234;42235;42236;42237;42238;42239 42232 724;725;726 39 NSSYFVEWIPNNVK 2 Deamidation (N) 1697.7937 0.7937022 1795;2283;1863;2975;3072;3183;2805 P99024;P68372;Q7TMM9;Q922F4;Q9CWF2;Q9D6F9;Q9ERD7 Tubb5;Tubb4b;Tubb2a;Tubb6;Tubb2b;Tubb4a;Tubb3 Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-6 chain;Tubulin beta-2B chain;Tubulin beta-4A chain;Tubulin beta-3 chain no no 0 2 0 0 8.12 2.85 3 3 2 85.142 85.142 2;3;4 8.2888E-11 33702 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.191 74.949 58.568 57.295 93.021 163.71 38.044 28.762 55 56 93 158 37 28 3 3 2 3 1 2 30600 15589 1863;1795;2283;2805;2975;3072;3183 14963 36371;36372;36373;36374;36375;36376;36377;36378 42240;42241;42242;42243;42244;42245;42246;42247 42247 724;725;726 8 NSTFSELFK Unmodified 1071.5237 0.52367535 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 8.5 0.5 1 1 69.271 69.271 2 0.00059646 22950 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.6 82.299 127.85 0 238.46 243.19 319.55 238.19 120 0 231 241 324 232 1 0 2 2 2 2 43697 15590 1537 14964 36379;36380 42248;42249 42248 2 NSTLPSFLTAVLK Unmodified 1389.7868 0.78676633 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 10.5 0.5 1 1 88.445 88.445 3 0.0020708 28597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.185 28.357 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 3358.4 15591 1083 14965 36381;36382 42250;42251 42250 2 NSVFQQGMK Unmodified 1037.4964 0.49641475 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 9.33 2.62 1 1 1 50.547 50.547 2 2.8109E-08 16349 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 166.09 89.497 295.51 215.96 328.85 187.53 339.55 309.04 278 223 325 194 343 299 3 3 4 3 4 4 48839 15592 106;2253;2699 14966 36383;36384;36385 42252;42253;42254;42255 42255 4 NSVVEASEAAYK Deamidation (N) 1267.5932 0.59321148 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 1 0 0 3.67 0.471 1 2 55.178 55.178 2;3 0.00060166 19236 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.588 33.779 78.643 27.179 163.12 177.45 43.668 137.33 74 28 158 176 46 130 2 1 3 4 1 2 16911 15593 1797 14967 36386;36387;36388 42256;42257;42258;42259 42256 734 4 NSVVEASEAAYK Unmodified 1266.6092 0.6091959 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 7.67 3.82 1 2 1 2 51.721 51.721 2;3 3.0894E-72 16936 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 216.53 177.52 205.76 309.39 593.44 301.6 466.89 419.31 194 310 579 301 463 399 2 3 5 3 4 4 163610 15594 1797 14967 36389;36390;36391;36392;36393;36394 42260;42261;42262;42263;42264;42265;42266 42262 7 NSWNTISFHTGAALR Unmodified 1673.8274 0.82740237 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9 0 1 57.162 57.162 3 0.018914 16558 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.338 18.109 39.468 46.283 0 30.604 0 0 37 46 0 28 0 0 1 1 0 1 0 0 2577.6 15595 1226 14968 36395 42267 42267 1 NSYATTENK Unmodified 1026.4618 0.46180338 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8 3.56 1 1 1 35.106 35.106 2;3 0.00097711 8833 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.662 25.181 29.93 0 19.133 28.608 45.492 38.144 28 0 19 28 46 37 1 0 1 1 1 1 3019.8 15596 607 14969 36396;36397;36398 42268;42269;42270 42270 3 NSYLEVLLK Unmodified 1077.607 0.60701105 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 9 0 1 77.477 77.477 3 0.053845 26119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.917 12.175 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3369.6 15597 1933 14970 36399 42271 42271 1 NSYLGLVSLPAASVAGR Unmodified 1673.9101 0.91006937 528 F6RK07;A2AUX5;A2AUX3;B7ZD29;Q3UHC7 Dab2ip Disabled homolog 2-interacting protein yes no 0 0 0 0 10 0 1 76.182 76.182 3 0.0026637 23205 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.116 17.468 29.904 27.776 0 0 66.701 37.539 28 28 0 0 65 37 1 1 0 0 1 1 2839.9 15598 528 14971 36400 42272 42272 1 NTAIFINISR Unmodified 1147.635 0.63495714 2781 Q91Z53;B1AXQ0 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 0 10 0 1 63.715 63.715 3 0.0013501 17648 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.555 34.08 30.044 0 0 0 28.291 29.041 28 0 0 0 28 28 1 0 0 0 1 1 1954.3 15599 2781 14972 36401 42273 42273 1 NTDEMVELR Unmodified 1105.5074 0.50737336 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23;H3BJ43;A0A286YE41 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 3 0.816 1 1 1 49.273 49.273 2 0.0017659 15859 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.249 46.253 98.716 38.394 134.57 185.63 153.22 272.79 92 37 130 176 158 260 2 1 2 3 3 4 54567 15600 613 14973 36402;36403;36404 42274;42275;42276;42277 42277 4 NTDQASMPENTVAQK Unmodified 1632.7413 0.74134906 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 4 0 1 45.712 45.712 3 0.0011221 14285 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.981 35.569 20.27 0 19.583 19.6 0 0 19 0 19 19 0 0 1 0 1 1 0 0 2179.3 15601 1974 14974 36405 42278 42278 1 NTEAIGNEVTR Unmodified 1202.5891 0.58912916 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 4 0 1 39.51 39.51 2 0.01035 11426 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.305 29.913 29.782 17.722 29.083 0 0 0 28 19 28 0 0 0 1 1 1 0 0 0 28556 15602 240 14975 36406 42279 42279 1 NTEDLTEEWLR Unmodified 1404.6521 0.65212334 2930 Q9CQI3;A0A2I3BR94;A0A2I3BPS1 Gmfb Glia maturation factor beta yes no 0 0 0 0 6.25 3.96 1 1 1 1 68.171 68.171 2;3 1.5563E-07 25120 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.39 72.994 277.78 186.22 151.16 134.66 175.13 106.15 260 195 148 130 175 102 4 5 2 4 3 2 41459 15603 2930 14976 36407;36408;36409;36410 42280;42281;42282;42283;42284 42280 5 NTEEEGPK Unmodified 902.39814 0.39814049 23 A0A087WRN1;A0A087WQA0;F8WI22;Q8K019 Bclaf1 Bcl-2-associated transcription factor 1 yes no 0 0 0 0 2 0 1 31.547 31.547 2 0.015971 7774 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.645 39.521 0 48.522 25.251 47.909 45.915 0 0 46 28 46 46 0 0 1 1 1 1 0 2455.7 15604 23 14977 36411 42285 42285 1 NTELDPVTTEEQVLDVK Unmodified 1928.9579 0.957867 2314 Q80U63;A2A7Y8;A8Y5E5 Mfn2 Mitofusin-2 yes no 0 0 0 0 3 0.816 1 1 1 74.22 74.22 3 7.8239E-06 27828 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.264 59.967 0 0 59.386 27.065 0 53.442 0 0 56 28 0 51 0 0 1 1 0 2 8248.8 15605 2314 14978 36412;36413;36414 42286;42287;42288 42287 3 NTENGSAPSTAPTDQNR Deamidation (N) 1759.7609 0.76089853 2772 Q91YL2 Rnf126 E3 ubiquitin-protein ligase RNF126 yes yes 0 1 0 0 1 0 2 31.274 31.274 3 2.2821E-05 7458 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.379 73.098 29.972 14.25 0 0 47.854 47.67 28 14 0 0 47 46 2 1 0 0 1 2 8756.5 15606 2772 14979 36415;36416 42289;42290 42290 993 2 NTETEESLAK Unmodified 1120.5248 0.52479757 925 E9Q7K1;Q564G0;Q64520 Guk1 Guanylate kinase yes no 0 0 0 0 3 0.816 1 1 1 42.378 42.378 2;3 6.2859E-05 13071 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.06 66.624 39.666 94.628 35.033 47.129 56.411 39.442 37 92 37 46 56 37 1 3 1 1 1 1 12711 15607 925 14980 36417;36418;36419 42291;42292;42293 42292 3 NTFAEITGLSPGVTYLFK Unmodified 1957.0197 0.019679395 28 B7ZNJ1;A0A087WS56;B9EHT6;A0A087WSN6;Q3UHL6;A0A087WR50;P11276 Fn1 Fibronectin;Anastellin yes no 0 0 0 0 10 0 1 92.938 92.938 3 0.028306 30238 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.797 14.659 9.657 0 0 0 24.058 0 9 0 0 0 23 0 1 0 0 0 1 0 1707.2 15608 28 14981 36420 42294 42294 1 NTFNGKLPFLFK Deamidation (N) 1425.7656 0.76563696 2822 Q924M7;F6Q3K8 Mpi Mannose-6-phosphate isomerase yes no 0 1 0 1 11 0 1 79.072 79.072 3 0.014458 24191 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.875 38.196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15609 2822 14982 36421 42295 42295 1002 1 NTGESASQLLDAETAER Unmodified 1790.8282 0.82824981 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9;E9Q405;A0A1C7ZN10;E9QA74 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 2.5 0.5 1 1 55.299 55.299 3 5.1397E-05 19147 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.227 49.523 9.3549 38.433 48.501 0 18.538 38.913 9 37 47 0 19 37 1 1 2 0 1 1 12477 15610 620 14983 36422;36423 42296;42297 42297 2 NTGIICTIGPASR Unmodified 1358.6976 0.69763375 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0;A0A1L1ST52 Pkm Pyruvate kinase PKM yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 53.875 53.875 2;3 6.7607E-21 16350 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 157.22 106.16 465.29 223.28 277.73 371.49 506.99 302.01 436 231 269 352 504 289 7 4 5 4 6 5 245230 15611 1609 14984 36424;36425;36426;36427;36428 42298;42299;42300;42301;42302;42303;42304;42305 42299 8 NTGLITVQGPVDREDLSTLR Unmodified 2183.1546 0.15460975 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 1 5.5 0.5 1 1 62.77 62.77 3 5.6492E-07 21379 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.088 50.304 29.523 75.799 56.606 67.146 27.906 0 28 74 56 65 28 0 1 2 1 2 1 0 12710 15612 1018;2532 14985 36429;36430 42306;42307 42307 2 NTGVSVGQK Unmodified 888.46649 0.46649483 1103;2192 G5E8G3;Q6DFY2 Opcml no no 0 0 0 0 8.5 2.69 1 1 1 1 38.688 38.688 2;3 0.00087675 8585 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.71 49.146 255.93 188.89 572.2 616.19 515.42 553.78 241 195 562 603 538 532 3 2 3 3 4 3 45730 15613 1103;2192 14986 36431;36432;36433;36434 42308;42309;42310;42311 42310 4 NTHTLLLAGVFR Unmodified 1340.7565 0.75646926 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 11 0 1 61.835 61.835 3 0.029623 16421 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.516 18.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5351.5 15614 3291 14987 36435 42312 42312 1 NTIHGFK Unmodified 815.42899 0.42898711 1581 P48722;E0CY23;A0A0N4SW76 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 8.5 0.5 1 1 39.514 39.514 3 0.015095 8588 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.342 47.989 128.36 79.657 0 118.92 127.98 134.93 120 83 0 111 132 130 1 1 0 1 1 1 12133 15615 1581 14988 36436;36437 42313;42314 42314 2 NTISLLVAGLK Unmodified 1127.6914 0.69140938 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 1 0 1 81.786 81.786 2 0.0073395 28644 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.166 46.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15616 3204 14989 36438 42315 42315 1 NTIVTSYNR Unmodified 1066.5407 0.5407224 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 40.917 40.917 2;3 9.4639E-46 9607 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 213.45 176.88 452.86 530.06 262.48 367.37 588.75 304.73 426 531 268 352 589 296 4 4 3 3 4 3 144220 15617 2843 14990 36439;36440;36441;36442 42316;42317;42318;42319 42318 4 NTIYAALQDFAQVTLR Unmodified 1822.9577 0.95774784 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 10.5 0.5 1 1 97.258 97.258 3 8.8569E-08 31790 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.26 87.682 9.535 0 49.764 23.395 0 0 9 0 47 23 0 0 1 0 2 1 0 0 7437.3 15618 2057 14991 36443;36444 42320;42321 42320 2 NTKPLLQSR Unmodified 1055.6087 0.60874239 3249 Q9JME5;A0A140LHP9;Q9Z1T1 Ap3b2;Ap3b1 AP-3 complex subunit beta-2;AP-3 complex subunit beta-1 yes no 0 0 0 1 9.5 0.5 1 1 38.741 38.741 3 0.039449 7324 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.028 31.521 280.12 262.19 307.19 273.24 131.33 197.21 264 269 311 269 130 185 2 2 2 2 1 1 25206 15619 3249 14992 36445;36446 42322;42323 42323 2 NTLFNLSNFLDK Unmodified 1424.73 0.72997974 2129;2280 Q7M6Y3;A0A140LHG9;Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Picalm;Snap91 Phosphatidylinositol-binding clathrin assembly protein;Clathrin coat assembly protein AP180 no no 0 0 0 0 9.43 3.62 1 1 1 3 1 88.691 88.691 2;3;4 2.5424E-15 28295 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 142.47 100.13 187.38 415.58 496.47 300.05 133.51 148.42 176 408 485 291 130 140 3 5 5 5 3 3 236840 15620 2280;2129 14993 36447;36448;36449;36450;36451;36452;36453 42324;42325;42326;42327;42328;42329;42330;42331;42332;42333 42330 10 NTLFNLSNFLDK Deamidation (N) 1425.714 0.71399532 2129;2280 Q7M6Y3;A0A140LHG9;Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Picalm;Snap91 Phosphatidylinositol-binding clathrin assembly protein;Clathrin coat assembly protein AP180 no no 0 1 0 0 8.8 0.4 1 4 91.602 91.602 3 0.00058558 33103 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.527 42.842 80.055 63.48 55.655 77.674 91.015 48.015 75 65 56 75 92 46 2 2 2 3 4 1 14557 15621 2280;2129 14993 36454;36455;36456;36457;36458 42334;42335;42336;42337;42338 42337 829;830;831 5 NTLFVSNNSR Unmodified 1150.5731 0.57308516 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 10 2.16 1 1 1 45.975 45.975 2 4.3165E-05 12025 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.45 66.612 0 48.944 66.964 155.28 132.64 163.58 0 46 65 148 139 157 0 1 1 2 2 2 18881 15622 1670 14994 36459;36460;36461 42339;42340;42341 42339 3 NTLLIAGLQAR Unmodified 1168.6928 0.69280637 1219 O54734 Ddost Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 0 10 0 1 65.003 65.003 2 0.0051529 18182 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.664 27.516 39.331 0 62.222 56.123 73.214 46.947 37 0 60 56 74 46 1 0 1 1 1 1 4733.1 15623 1219 14995 36462 42342 42342 1 NTLNPYYNESFSFEVPFEQIQK Unmodified 2693.2649 0.26494806 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 7.88 2.15 2 3 1 1 1 88.915 88.915 3;4 5.0333E-16 34899 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.804 77.505 85.285 281.68 217.72 124.67 100.99 216.65 80 277 210 117 103 206 3 9 5 5 4 7 97244 15624 1553 14996 36463;36464;36465;36466;36467;36468;36469;36470 42343;42344;42345;42346;42347;42348;42349;42350;42351;42352;42353 42353 11 NTLQLHR Unmodified 880.4879 0.48789897 3004 Q9CZM2 Rpl15 60S ribosomal protein L15 yes yes 0 0 0 0 7.5 0.5 1 1 32.616 32.616 3 0.0052912 6459 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 49.347 39.34 26.5 38.246 0 46.477 47.71 37 28 37 0 46 46 1 1 1 0 1 1 3040.1 15625 3004 14997 36471;36472 42354;42355 42354 2 NTMAACDPR Unmodified 1034.4273 0.4273489 647 CON__ENSEMBL:ENSBTAP00000025008 yes yes 0 0 0 0 5 0 1 31.541 31.541 2 0.0037982 7117 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.948 53.068 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 939.2 + 15626 647 14998 36473 42356 42356 1 NTNAGAPPGTAYQSPLSLSR Unmodified 2000.9916 0.99156716 2074 Z4YJV4;Q60597;Q5SVY0 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 10 3 1 1 56.713 56.713 3 1.192E-08 17645 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.015 47.732 0 19.566 38.86 0 19.874 0 0 19 37 0 19 0 0 1 1 0 1 0 4709.6 15627 2074 14999 36474;36475 42357;42358 42357 2 NTNDANSCQIIIPQNQVNR Unmodified 2198.0498 0.049827099 1595;2132 Q61598;A0A1Y7VL99;A0A1Y7VLG4;P50396;B7FAU8 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 0 6.6 3.26 1 2 1 1 51.173 51.173 3;4 6.372E-36 16658 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 148.22 124.66 78.973 134.37 38.86 109.23 129.31 48.031 74 130 37 102 130 46 3 3 1 3 4 1 80394 15628 2132;1595 15000 36476;36477;36478;36479;36480 42359;42360;42361;42362;42363 42363 5 NTNDANSCQIIIPQNQVNR Deamidation (N) 2199.0338 0.033842684 1595;2132 Q61598;A0A1Y7VL99;A0A1Y7VLG4;P50396;B7FAU8 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 1 0 0 4.25 0.433 3 1 53.304 53.304 3 2.3844E-07 18231 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.487 76.396 73.247 84.166 61.508 76.399 92.895 20.254 69 83 65 74 93 19 2 1 2 1 2 1 22407 15629 2132;1595 15000 36481;36482;36483;36484 42364;42365;42366;42367 42366 609;610;611 4 NTNPNFVR Unmodified 960.47773 0.47772821 1974;2696 Q8VDD5;Q3UH59;Q61879;Q5SV64 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 6.5 0.5 1 1 37.103 37.103 2 0.022774 9274 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.605 39.511 0 88.904 28.261 130.57 0 88.478 0 84 28 121 0 83 0 2 1 2 0 1 10242 15630 2696;1974 15001 36485;36486 42368;42369 42368 2 NTNVEDVLNAR Unmodified 1243.6157 0.61567826 887 E9Q2S9;Q9CR29 Ccdc43 Coiled-coil domain-containing protein 43 yes no 0 0 0 0 5 0 1 53.685 53.685 2 0.035228 17723 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.275 22.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15631 887 15002 36487 42370 42370 1 NTPEFDILVIGGGATGCGCALDAVTR Unmodified 2663.2683 0.26833565 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 6 0 1 86.112 86.112 3 6.2472E-05 32263 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.596 33.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3302.7 15632 2179 15003 36488 42371 42371 1 NTPIYVSSPTWENHNAVFSAAGFK Unmodified 2636.266 0.26595111 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 8 0.707 1 2 1 72.72 72.72 3;4 4.6611E-25 24603 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.841 75.611 97.697 54.867 124.84 27.251 142.84 37.843 92 56 120 28 139 37 2 1 2 1 2 1 33530 15633 1311 15004 36489;36490;36491;36492 42372;42373;42374;42375 42374 4 NTPSPFVETFPEDAEASK Unmodified 1964.9004 0.90035212 1855 P97494 Gclc Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 0 4 0 1 68.551 68.551 3 0.00031245 24662 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.763 36.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15634 1855 15005 36493 42376 42376 1 NTTAAEEAR Unmodified 961.44649 0.44648767 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 5.33 5.44 1 1 1 23.835 23.835 2 3.0398E-05 4062 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.36 86.685 323.87 164.9 271.73 29.376 243.71 235.03 304 178 263 28 242 227 2 2 3 1 2 2 42563 15635 2422 15006 36494;36495;36496 42377;42378;42379 42377 3 NTTADLQK Unmodified 889.45051 0.45051041 3252 Q9JMG7 Hdgfrp3 Hepatoma-derived growth factor-related protein 3 yes yes 0 0 0 0 9 4 1 1 40.232 40.232 2 0.0088971 11171 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.65 46.116 78.289 91.848 109.17 112.91 101.51 0 74 93 111 111 102 0 1 1 1 1 1 0 6878.2 15636 3252 15007 36497;36498 42380;42381 42380 2 NTTGVTEEALK Unmodified 1161.5877 0.58773217 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.67 3.45 2 1 1 1 1 48.355 48.355 2;3 6.2056E-10 15524 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.16 63.173 453.83 350.93 611.82 242.17 241.68 518.39 428 361 597 240 241 491 6 4 6 4 3 5 103750 15637 551 15008 36499;36500;36501;36502;36503;36504 42382;42383;42384;42385;42386;42387;42388 42384 7 NTTIPTK Unmodified 773.42832 0.42831841 1762;1533;1397 P38647;P17156;P63017;Q504P4 Hspa9;Hspa2;Hspa8 Stress-70 protein, mitochondrial;Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 0 8.5 2.06 1 2 2 1 1 1 42.188 42.188 2;3 0.017545 9657 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.41 49.62 2250 1665.8 2081.4 1864.5 2422.1 2454.1 2116 1731 2076 1861 2475 2367 7 7 5 6 6 8 480660 15638 1533;1397;1762 15009 36505;36506;36507;36508;36509;36510;36511;36512 42389;42390;42391;42392;42393;42394;42395;42396 42394 8 NTTPDELLSAVLTAVLQDVR Unmodified 2154.1532 0.15321276 2795 Q921H8;H3BKL5;H3BJZ9;H3BKA1;H3BJC1 Acaa1a 3-ketoacyl-CoA thiolase A, peroxisomal yes no 0 0 0 0 10.8 1.48 1 1 1 1 122.22 122.22 3 3.7972E-11 36753 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.752 64.63 5.3561 1.7668 9.738 8.279 0 9.594 5 2 9 8 0 9 1 1 1 2 0 1 3573.5 15639 2795 15010 36513;36514;36515;36516 42397;42398;42399;42400;42401;42402 42400 6 NTTVTEQNR Unmodified 1061.5102 0.51015055 1131 H7BXB6;Z4YLG3;Q80U30 Clec16a Protein CLEC16A yes no 0 0 0 0 4 0 1 24.978 24.978 2 0.062438 4691 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.327 14.305 9.657 0 0 0 14.644 0 9 0 0 0 14 0 1 0 0 0 1 0 425.97 15640 1131 15011 36517 42403 42403 1 NTVAAIEEALDVDR Unmodified 1514.7577 0.75765105 712 D3YX85;E9PX52;Q7SIG6 Asap2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 4 0 1 79.635 79.635 3 0.0016499 29765 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.501 28.458 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1948.1 15641 712 15012 36518 42404 42404 1 NTVIATGGYGR Unmodified 1107.5673 0.5672715 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 8 0 1 43.3 43.3 2 0.00052137 10719 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.839 56.495 59.862 44.908 0 50.337 54.963 37.874 56 46 0 47 56 37 1 1 0 1 1 1 6270.2 15642 2597 15013 36519 42405 42405 1 NTVILFVPQQEAWVVER Unmodified 2027.084 0.084010986 2827 Q99JB2;A2AG41 Stoml2 Stomatin-like protein 2, mitochondrial yes no 0 0 0 0 9.33 2.62 1 1 1 84.03 84.03 3 0.00016165 29874 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.512 38.279 0 0 68.217 47.438 0 78.884 0 0 65 46 0 74 0 0 2 1 0 2 7553.6 15643 2827 15014 36520;36521;36522 42406;42407;42408 42407 3 NTVPCQK Unmodified 845.40654 0.40653711 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 7 0 1 34.903 34.903 2 0.040319 7518 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.116 10.201 29.8 27.487 17.677 0 19.197 19.706 28 28 18 0 19 19 1 1 1 0 1 1 1528.8 15644 1089 15015 36523 42409 42409 1 NTVQEHSAFR Unmodified 1187.5683 0.56833414 565 B0QZW1;F2Z488;B0QZW2 Gria3 no no 0 0 0 0 4 0 1 30.272 30.272 3 0.06291 6998 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.952 10.509 0 0 0 0 51 0 0 0 0 0 51 0 0 0 0 0 1 0 3943.9 15645 565 15016 36524 42410 42410 1 NTVQGFK Unmodified 792.413 0.41300269 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 8.5 0.5 1 1 44.656 44.656 2 0.027247 10683 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.458 52.74 127.56 97.934 119.23 91.81 258.13 249.54 120 102 120 93 259 241 1 1 1 1 2 2 30645 15646 1957 15017 36525;36526 42411;42412 42412 2 NTVSSAR Unmodified 733.37187 0.37186616 2901 Q9CPW4;Q3UA72 Arpc5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 0 8 3.56 1 1 1 20.102 20.102 2 0.015395 2797 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.26 35.582 65.412 129.42 77.47 95.209 38.799 98.031 62 127 83 92 40 93 3 3 3 3 1 3 20661 15647 2901 15018 36527;36528;36529 42413;42414;42415 42414 3 NTVTLLEEALDQDR Unmodified 1615.8053 0.80532952 962 H3BJM7;H3BKD4;H3BKE6;E9QMI7;E9QMJ1;H3BL41;H3BJY2;E9QN63;Q9QWY8 Asap1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 0 5 0 1 82.232 82.232 3 8.211E-05 31225 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.615 52.286 0 0 20.558 0 19.564 9.0357 0 0 19 0 19 9 0 0 1 0 1 1 1558 15648 962 15019 36530 42416 42416 1 NTVVPTK Unmodified 757.4334 0.43340378 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 8 0 1 42.767 42.767 2 0.035925 10499 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.548 37.432 69.404 0 57.259 66.962 35.626 0 65 0 56 65 37 0 1 0 1 1 1 0 4374.4 15649 1419 15020 36531 42417 42417 1 NTYDVVYLK Unmodified 1113.5706 0.57062555 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 8.5 2.69 1 1 1 1 62.953 62.953 2;3 0.00073444 20669 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.7 53.607 275.51 194.5 238.04 65.434 130.62 204.45 259 204 232 65 129 194 4 4 3 1 2 2 31900 15650 407 15021 36532;36533;36534;36535 42418;42419;42420;42421 42419 4 NTYPKDEAHVSDEFSK Unmodified 1865.8432 0.84317159 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 1 6 0 1 48.273 48.273 4 0.0024028 14501 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.077 25.024 59.578 34.405 56.576 37.069 0 69.29 56 37 56 37 0 65 1 1 1 1 0 1 2052.4 15651 2886 15022 36536 42422 42422 1 NVADDTR Unmodified 789.3617 0.3616954 1919 Q3TFP0;Q9R0U0 Srsf10 Serine/arginine-rich splicing factor 10 yes no 0 0 0 0 2.5 0.5 1 1 25.435 25.435 2 0.027563 5051 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 81.548 42.742 44.747 26.25 31.383 32.332 41.133 38.268 42 28 32 32 42 37 1 1 1 1 1 1 5983.1 15652 1919 15023 36537;36538 42423;42424 42423 2 NVADYYPEYK Unmodified 1260.5663 0.56626845 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 58.087 58.087 2;3 3.0825E-05 19974 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.1 92.682 453.72 318.92 297.16 407.96 328.11 455.41 426 325 296 389 334 436 5 4 3 4 3 4 90482 15653 1606 15024 36539;36540;36541;36542;36543 42425;42426;42427;42428;42429 42429 5 NVAGDGVNR Unmodified 900.44134 0.44134271 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 8 5 1 1 29.262 29.262 2 0.0046415 6270 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.136 49.435 49.974 0 76.886 65.767 36.981 29.848 47 0 74 65 37 28 2 0 2 2 1 1 5533.1 15654 1561 15025 36544;36545 42430;42431 42431 2 NVCVVHCLDGR Unmodified 1327.6125 0.61252391 2306 Q80TZ3;B1B0B8 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 6 0 1 44.072 44.072 3 0.00014547 12548 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.914 71.044 0 0 0 0 56.948 47.411 0 0 0 0 56 46 0 0 0 0 1 1 5602.2 15655 2306 15026 36546 42432 42432 1 NVDKNDEAEYVCIAENK Unmodified 2009.9 0.90003454 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 4.5 0.957 1 2 2 1 59.491 59.491 3;4 1.0222E-17 20766 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.56 99.871 504.32 330.21 307.09 387.31 517.29 287.18 473 343 306 380 520 278 7 6 4 6 6 5 100890 15656 71;74;949;1367 15027 36547;36548;36549;36550;36551;36552 42433;42434;42435;42436;42437;42438;42439;42440 42435 8 NVDKNDEAEYVCIAENK Deamidation (N) 2010.8841 0.88405013 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 1 0 1 13 0 1 58.502 58.502 3 4.4391E-06 20441 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.051 54.041 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15657 71;74;949;1367 15027 36553 42441 42441 26 1 NVDLLSDMVQEHDEPILK Unmodified 2094.0303 0.030320436 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 5 0 2 77.441 77.441 3;4 3.1613E-08 28884 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.71 78.216 30.044 20.073 8.5336 20.767 19.874 0 28 19 9 19 19 0 1 1 1 1 1 0 8955 15658 833 15028 36554;36555 42442;42443 42443 2 NVDLSTFYQNR Unmodified 1355.647 0.64697839 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 7.33 0.471 2 1 63.479 63.479 2;3 0.00020498 20855 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.604 70.09 89.896 0 78.066 38.156 74.768 116.19 84 0 74 37 74 111 2 0 2 1 2 3 15079 15659 3012 15029 36556;36557;36558 42444;42445;42446 42444 3 NVDMLSELVQEYDEPILK Unmodified 2134.0504 0.050387176 637 B7ZNL2;Q78ZA7 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 0 9 4 1 1 96.558 96.558 3;4 7.1666E-07 38830 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.155 51.361 33.048 39.218 43.017 3.0278 33.19 43.595 31 39 40 3 32 41 2 2 2 1 2 2 5034.5 15660 637 15030 36559;36560 42447;42448;42449 42449 3 NVDTNQDR Unmodified 960.42609 0.42608657 267 A0A1C7CYU3;Q02819;A0A1B0GR41 Nucb1 Nucleobindin-1 yes no 0 0 0 0 2.5 0.5 1 1 24.399 24.399 2 0.0095984 4689 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.815 51.254 54.54 18.558 14.997 34.563 21.979 14.297 51 19 14 32 23 14 2 1 1 1 1 1 5721.3 15661 267 15031 36561;36562 42450;42451 42450 2 NVDTVEIPDGR Unmodified 1213.5939 0.59388018 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 3 0 1 51.712 51.712 2 0.0027047 17463 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.744 41.864 0 39.368 0 0 38.702 0 0 37 0 0 37 0 0 1 0 0 1 0 2997.3 15662 2725 15032 36563 42452 42452 1 NVDVEFFK Unmodified 996.49165 0.49164694 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 69.096 69.096 2;3 0.012131 25363 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.629 43.562 98.208 342.85 280.66 247.52 361.18 96.188 93 334 288 241 355 93 2 4 3 2 2 1 52302 15663 1382 15033 36564;36565;36566;36567 42453;42454;42455;42456 42456 4 NVEAQSTEEMFVK Unmodified 1510.6974 0.69735898 398;400 A0A2R8VK70;A0A2R8VI30;Q61735;A0A2R8W6P0 Cd47 Leukocyte surface antigen CD47 no no 0 0 0 0 7.67 3.86 1 1 1 61.176 61.176 3 1.2201E-07 21666 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.15 82.465 118.16 109.03 66.178 0 223.63 280.37 111 111 65 0 223 269 2 2 1 0 3 3 22179 15664 398;400 15034 36568;36569;36570 42457;42458;42459 42457 3 NVEDIELWLYEVEGHLASDDYGK Unmodified 2693.2497 0.24969192 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 100.61 100.61 4 2.4501E-16 36005 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.903 81.975 6.3821 42.785 24.451 7.651 2.9945 53.971 6 41 25 7 3 53 1 2 2 1 1 3 6019.4 15665 551 15035 36571;36572;36573 42460;42461;42462;42463 42460 4 NVEDLSGGELQR Unmodified 1315.6368 0.63680763 1694 P61222 Abce1 ATP-binding cassette sub-family E member 1 yes yes 0 0 0 0 4 0 1 50.641 50.641 2 0.0014939 16554 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.451 43.332 0 0 0 30.092 27.237 19.477 0 0 0 28 28 19 0 0 0 1 1 1 2954 15666 1694 15036 36574 42464 42464 1 NVEEETK Unmodified 847.39233 0.39232683 685 Q9R1V6;D3YUP9;D3YUQ0 Adam22 Disintegrin and metalloproteinase domain-containing protein 22 yes no 0 0 0 0 3.5 0.5 1 1 35.616 35.616 2 0.024587 10053 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.64 39.644 269.89 227.36 331.73 304.77 276.96 147.2 254 236 333 297 278 139 3 4 4 3 2 2 15950 15667 685 15037 36575;36576 42465;42466;42467;42468 42466 4 NVEGQDMLYQSLK Unmodified 1523.729 0.72899346 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 7.75 3.11 1 1 1 1 65.937 65.937 2;3 3.4307E-15 22843 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.04 113.2 257.18 87.398 188.84 191.01 194.16 231.92 241 93 186 185 195 222 3 3 3 3 3 4 34565 15668 1203;3123 15038 36577;36578;36579;36580 42469;42470;42471;42472;42473 42471 5 NVESGEDELTSR Unmodified 1334.595 0.5950024 100 A0A0G2JG95;Q8BX10 Pgam5 Serine/threonine-protein phosphatase PGAM5, mitochondrial yes no 0 0 0 0 1 0 1 42.05 42.05 2 3.5056E-103 11924 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 240.05 156.88 49.076 0 47.437 46.851 31.869 44.929 46 0 46 46 34 43 1 0 1 1 1 1 15162 15669 100 15039 36581 42474 42474 1 NVETMNYADIER Unmodified 1453.6507 0.65074314 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 4 0.707 1 2 1 54.934 54.934 2;3 2.8134E-08 18599 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.72 79.21 0 80.864 40.034 9.1293 104.61 48.49 0 76 37 9 102 47 0 2 1 1 3 2 19717 15670 3049 15040 36582;36583;36584;36585 42475;42476;42477;42478 42477 4 NVEVPEWTK Unmodified 1100.5502 0.55022446 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 7 0 1 62.31 62.31 2 0.024452 20331 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.353 30.28 29.865 0 30.145 0 0 29.848 28 0 28 0 0 28 1 0 1 0 0 1 2925.4 15671 3249 15041 36586 42479 42479 1 NVFDEAILAALEPPEPK Unmodified 1851.9618 0.96183016 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 7.25 2.33 1 3 2 1 1 95.719 95.719 3;4 6.7195E-06 35484 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.457 71.076 24.314 44.551 49.136 81.888 76.223 108.52 23 42 49 79 75 104 3 2 4 5 4 4 18800 15672 1676 15042 36587;36588;36589;36590;36591;36592;36593;36594 42480;42481;42482;42483;42484;42485;42486;42487;42488;42489;42490;42491;42492 42480 13 NVFLLGFIPAK Unmodified 1217.7172 0.7172302 3168 Q9EPU0 Upf1 Regulator of nonsense transcripts 1 yes yes 0 0 0 0 1 0 2 92.155 92.155 3 0.00042378 32230 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.865 53.466 0 39.131 14.187 8.9914 28.291 29.041 0 37 14 9 28 28 0 2 1 1 1 1 5092.4 15673 3168 15043 36595;36596 42493;42494 42493 2 NVFNALVR Unmodified 931.52395 0.52395013 2957 Q9CR62;Q5SX46 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 10.8 1.48 1 1 1 1 62.112 62.112 2 0.0011668 17092 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.66 73.169 809.61 316.6 717.62 447.82 244.73 506.83 760 335 703 436 251 482 4 2 4 3 2 4 124900 15674 2957 15044 36597;36598;36599;36600 42495;42496;42497;42498 42496 4 NVFYELEDVR Unmodified 1282.6194 0.61936665 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 5 0 2 71.645 71.645 2;3 0.0077945 26142 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.471 42.424 39.342 46.934 20.51 49.966 35.767 49.081 37 46 19 46 38 47 2 1 1 1 2 2 8364 15675 573 15045 36601;36602 42499;42500 42499 2 NVGCLQEALQLATSFAQLR Unmodified 2118.0892 0.089172718 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11.5 1.12 1 1 1 1 100.96 100.96 3 1.1044E-20 33402 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.78 117.64 9.5895 14.896 61.329 30.94 0 74.62 9 14 58 30 0 70 1 1 3 2 0 3 35436 15676 2382 15046 36603;36604;36605;36606 42501;42502;42503;42504;42505 42503 5 NVGLDIEAEVPAVK Unmodified 1452.7824 0.78240924 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8 3.56 1 1 1 72.668 72.668 3 3.1443E-05 26642 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.615 49.287 48.855 45.952 201.49 145.73 214.12 57.859 46 47 195 148 213 56 1 1 3 3 3 1 19048 15677 1543 15047 36607;36608;36609 42506;42507;42508 42506 3 NVGNAILYETVLTIMDIK Unmodified 2006.0758 0.075814065 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 10 0 1 112.74 112.74 3 0.00085052 34392 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.288 36.265 5.365 0 0 0 9.414 0 5 0 0 0 9 0 1 0 0 0 1 0 1178.9 15678 1436 15048 36610 42509 42509 1 NVHELEK Unmodified 867.44503 0.4450311 1974;391 A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q02566;Q3UH59;Q61879;Q5SV64 Myh11;Myh6;Myh10 Myosin-11;Myosin-6;Myosin-10 no no 0 0 0 0 9 4 1 1 37.189 37.189 3 0.0052877 9852 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.355 45.219 118.64 138.65 74.283 236.38 155.81 233.27 111 139 74 223 167 223 1 2 1 2 2 2 14180 15679 391;1974 15049 36611;36612 42510;42511 42511 2 NVIEAVYNR Unmodified 1076.5615 0.56145784 1588 P49443 Ppm1a Protein phosphatase 1A yes yes 0 0 0 0 8 0 1 54.978 54.978 2 0.012187 16160 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.643 30.664 0 67.422 103.95 53.101 101.64 75.984 0 65 102 56 102 74 0 1 1 1 1 1 4777.7 15680 1588 15050 36613 42512 42512 1 NVIIWGNHSSTQYPDVNHAK Unmodified 2279.1083 0.10832826 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 0 0 0 8.33 1.25 1 1 1 53.831 53.831 4;5 7.4126E-11 13159 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.094 77.725 404.09 384.14 468.4 338.03 157.89 393.11 381 394 470 333 158 373 3 3 3 2 2 3 65787 15681 1373 15051 36614;36615;36616 42513;42514;42515 42515 3 NVIIWGNHSSTQYPDVNHAK Deamidation (N) 2280.0923 0.092343841 1373 P14152 Mdh1 Malate dehydrogenase, cytoplasmic yes yes 0 1 0 0 8 0 1 55.245 55.245 4 0.00092797 16315 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.376 35.712 0 0 0 49.072 64.115 47.206 0 0 0 46 65 46 0 0 0 1 1 1 5322.5 15682 1373 15051 36617 42516 42516 441 1 NVIQSVLQAIR Unmodified 1239.7299 0.72992016 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 6.5 5.5 1 1 85.409 85.409 2 0.0022125 30273 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.525 47.272 0 19.566 38.86 17.05 23.275 0 0 19 37 16 23 0 0 1 1 1 1 0 6700.8 15683 2282 15052 36618;36619 42517;42518 42517 2 NVISSSSFK Unmodified 967.49746 0.4974606 1066 Q3MIA8;G3UXW9;Q99LD4;A0A140LJB7;B1ATU4 Gps1 COP9 signalosome complex subunit 1 yes no 0 0 0 0 8.5 0.5 1 1 52.841 52.841 2 0.0016346 14429 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.788 77.702 129.83 0 0 50.278 0 148.17 121 0 0 46 0 139 2 0 0 1 0 2 14330 15684 1066 15053 36620;36621 42519;42520 42520 2 NVKPDQWVK Unmodified 1112.5978 0.59784335 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 11 2 1 1 50.737 50.737 3 0.0037864 13596 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.263 38.708 373.89 293.84 390.56 0 331.59 334.86 352 306 379 0 328 323 2 2 2 0 2 2 32472 15685 1899 15054 36622;36623 42521;42522 42521 2 NVLAESAR Unmodified 858.45593 0.45593014 3037 Q9D172;A0A1W2P7B6 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 38.612 38.612 2 0.006133 9255 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.22 60.812 237.26 365.46 217.22 310.63 301.55 456.17 223 361 214 296 314 436 3 4 3 4 4 5 111110 15686 3037 15055 36624;36625;36626;36627 42523;42524;42525;42526;42527 42526 5 NVLCSACSGQGGK Unmodified 1336.5864 0.58636874 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 7.5 0.5 1 1 45.073 45.073 3 0.00013486 11560 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.386 58.51 87.682 109.88 138.38 111.88 63.666 97.321 83 111 139 111 65 93 2 2 2 2 1 2 10188 15687 3279 15056 36628;36629 42528;42529 42529 2 NVLDSEDEIEELSK Unmodified 1618.7574 0.75737628 159 A0A1B0GSH5;D3YWG2;G8JL55;A0A0R4J058;A0A0R4J242;Q922Q9 Chid1 Chitinase domain-containing protein 1 yes no 0 0 0 0 4 0 1 71.473 71.473 3 0.00076879 25969 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.037 49.374 0 0 0 40.441 0 29.848 0 0 0 37 0 28 0 0 0 1 0 1 2017.1 15688 159 15057 36630 42530 42530 1 NVLELTGK Unmodified 872.49673 0.49673232 3037 Q9D172 D10Jhu81e ES1 protein homolog, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 61.419 61.419 2;3 0.0013085 18525 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 133.57 50.902 913.97 1011.2 1188.9 821.59 1240.9 932.1 861 1027 1193 815 1253 901 4 5 5 3 5 3 129610 15689 3037 15058 36631;36632;36633;36634 42531;42532;42533;42534;42535 42534 5 NVLFSHLDDNER Unmodified 1457.6899 0.68990583 3119;745 Q9DBC7;A2AI69;D3Z4L4;D3YTM5;D3Z068;D3Z0V6;P12849 Prkar1a;Prkar1b cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed;cAMP-dependent protein kinase type I-beta regulatory subunit no no 0 0 0 0 6 0 1 54.059 54.059 3 0.00059131 17289 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.534 48.396 138.11 116.13 133.69 202.93 118.9 225.8 130 120 139 195 130 215 1 1 1 1 1 1 11661 15690 3119;745 15059 36635 42536 42536 1 NVLGHMQQGGAPSPFDR Unmodified 1809.8581 0.85805057 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 7.5 0.5 1 1 53.725 53.725 3 7.5877E-07 15571 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.78 87.841 0 105.98 152.26 34.004 73.534 67.192 0 102 148 37 74 65 0 2 2 1 1 1 12047 15691 2507 15060 36636;36637 42537;42538 42538 2 NVLISVLQAIR Unmodified 1224.7554 0.75540662 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 13 0 1 90.639 90.639 2 0.033973 35978 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.998 22.849 0 29.343 26.859 37.624 64.641 47.191 0 28 28 37 65 46 0 1 1 1 1 1 4938.7 15692 2057 15061 36638 42539 42539 1 NVLIVEDIIDTGK Unmodified 1427.7872 0.78716026 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 7.2 2.99 2 1 1 1 84.886 84.886 2;3 8.0856E-07 30992 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.98 45.351 189.07 170.49 76.599 77.332 244.91 165.81 177 169 75 74 242 159 5 6 3 3 7 4 22870 15693 1295 15062 36639;36640;36641;36642;36643 42540;42541;42542;42543;42544;42545;42546;42547 42545 8 NVLLDPQLVPGGGASEMAVAHALTEK Unmodified 2616.3581 0.35813694 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 8.25 2.77 1 2 1 82.878 82.878 3;4 8.9284E-12 30081 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.793 53.062 138.64 71.115 134.56 59.076 71.651 185.57 130 74 130 56 74 176 2 3 3 2 2 3 14960 15694 1827 15063 36644;36645;36646;36647 42548;42549;42550;42551 42550 4 NVLLLGEDGAGK Unmodified 1184.6401 0.6401021 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 8 0 1 65.868 65.868 2 3.6135E-07 21370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.584 60.623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15695 2646 15064 36648 42552 42552 1 NVLSDSRPASYSR Unmodified 1450.7165 0.71645494 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 1 6 0 1 38.689 38.689 3 0.024072 10031 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.606 25.561 39.701 0 0 49.453 43.837 58.445 37 0 0 46 46 56 1 0 0 1 1 1 5167.7 15696 3335 15065 36649 42553 42553 1 NVLSGQNLQPPVIPLFPVIK Unmodified 2172.2671 0.26706073 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 9.4 4.22 1 2 2 95.218 95.218 3;4 8.3392E-11 27260 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.499 76.347 75.581 0 138.2 27.141 48.116 0 71 0 132 28 46 0 3 0 4 1 1 0 33901 15697 62 15066 36650;36651;36652;36653;36654 42554;42555;42556;42557;42558;42559 42558 6 NVLYPLYQLGGPQLR Unmodified 1729.9515 0.95154025 1217 O35972 Mrpl23 39S ribosomal protein L23, mitochondrial yes yes 0 0 0 0 11 0 1 80.678 80.678 2 0.024171 24937 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.598 17.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15698 1217 15067 36655 42560 42560 1 NVMSAFGLTDDQVSGPPSAPTEDR Unmodified 2490.1333 0.13328196 3372 Q9Z1A1;F6QJV5;B8JJG3 Tfg yes no 0 0 0 0 7 0 1 74.682 74.682 3 0.00099491 26083 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.642 30.196 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15699 3372 15068 36656 42561 42561 1 NVNAGGHK Deamidation (N) 796.38277 0.3827652 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 1 0 0 5 0 1 28.054 28.054 3 0.010497 5553 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.438 45.63 127.44 87.895 147.41 152.98 0 0 120 93 148 148 0 0 1 1 1 1 0 0 5706.5 15700 2097 15069 36657 42562 42562 815 1 NVNAGGHK Unmodified 795.39875 0.39874961 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 25.609 25.609 3 0.0019491 3768 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.933 58.912 620.09 255.76 342.2 453.5 343.25 241.13 581 264 344 427 352 232 6 4 5 4 3 3 43486 15701 2097 15069 36658;36659;36660;36661 42563;42564;42565;42566;42567;42568 42567 6 NVNDLNQWLSALR Unmodified 1541.795 0.79503961 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 10 0 1 85.498 85.498 2 8.2846E-12 27390 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.105 60.556 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15702 3391 15070 36662 42569 42569 1 NVNIQNFHISWK Unmodified 1498.7681 0.76809658 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 10.3 0.471 2 1 68.17 68.17 3;4 2.2533E-05 19102 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.925 63.236 148.09 97.649 94.389 98.97 200.68 115.64 139 97 97 97 200 111 2 1 1 1 3 2 47818 15703 418 15071 36663;36664;36665 42570;42571;42572 42572 3 NVNPNWSVNVK Unmodified 1269.6466 0.64658446 102 A0A0G2JGQ6;Q9JLM8;Q80VB6;Q9CXL6;Q6PGI2;O88809 Dclk1;Dcx Serine/threonine-protein kinase DCLK1;Neuronal migration protein doublecortin yes no 0 0 0 0 8 0 1 58.378 58.378 3 0.00045481 17843 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.834 58.301 69.745 0 0 50.278 0 0 65 0 0 46 0 0 1 0 0 1 0 0 5990.2 15704 102 15072 36666 42573 42573 1 NVNTALNTTQIPSSIEDIFNDDR Unmodified 2576.2354 0.23543884 812 E0CZE0;Q8VBW6 Nae1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 0 6 0 1 86.552 86.552 3 0.00052854 32449 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.883 32.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15705 812 15073 36667 42574 42574 1 NVNVQNFHISWK Unmodified 1484.7524 0.75244651 310 A0A1L1SV25;P57780;D3Z0L8;D3Z761 Actn4 Alpha-actinin-4 no no 0 0 0 0 9 0 1 64.969 64.969 3 2.2989E-05 20281 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.792 73.506 0 0 129.84 0 0 138.58 0 0 120 0 0 130 0 0 1 0 0 1 9947.6 15706 310 15074 36668 42575 42575 1 NVPEAFK Unmodified 803.41775 0.41775372 1856 P97765 Wbp2 WW domain-binding protein 2 yes yes 0 0 0 0 9.5 3.5 1 1 51.374 51.374 2 0.050256 16807 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.478 32.083 265.74 67.32 364.1 255.57 367.22 295.46 250 74 352 260 372 287 2 1 2 2 2 2 22173 15707 1856 15075 36669;36670 42576;42577 42577 2 NVPNLHVMK Unmodified 1050.5644 0.56443473 1785 P63325;A0A338P7K4;Q3UW83;A0A338P731 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 8.5 0.5 1 1 50.209 50.209 3 0.0032724 14011 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.016 40.901 0 39.368 165.55 121.29 0 246.25 0 37 158 120 0 231 0 1 1 1 0 2 12683 15708 1785 15076 36671;36672 42578;42579 42578 2 NVPNWHR Unmodified 921.45693 0.45693319 1744 P62827;Q14AA6 Ran;1700009N14Rik GTP-binding nuclear protein Ran yes no 0 0 0 0 9.5 3.5 1 1 36.216 36.216 3 0.011382 9472 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.415 55.321 0 29.792 144.13 171.33 138.93 0 0 28 139 167 139 0 0 1 1 2 1 0 14206 15709 1744 15077 36673;36674 42580;42581 42581 2 NVPQEDICEDSDIDGDYR Unmodified 2138.8699 0.86985663 75 O35343;A0A0B4J1E7;D3YTN1 Kpna4 Importin subunit alpha-3 yes no 0 0 0 0 1.5 0.5 1 1 55.782 55.782 3 3.4809E-07 17454 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.021 74.013 0 49.684 39.923 0 47.158 58.35 0 47 38 0 47 56 0 2 2 0 2 2 15686 15710 75 15078 36675;36676 42582;42583;42584 42582 3 NVPQEESLEDSDVDADFK Unmodified 2035.8858 0.88582427 1188 O35344 Kpna3 Importin subunit alpha-4 yes yes 0 0 0 0 2 0.816 1 1 1 64.483 64.483 3 5.5819E-19 23211 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.88 112.72 50.252 40.432 30.043 30.604 44.823 34.965 47 38 28 28 44 34 2 2 2 1 2 2 12026 15711 1188 15079 36677;36678;36679 42585;42586;42587;42588 42588 4 NVPSAGGGIGDGGQEPTTGNWR Unmodified 2125.9777 0.97770801 2590 Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein yes no 0 0 0 0 4 0.816 1 1 1 53.141 53.141 3 7.3801E-15 17448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.346 71.941 20.184 27.788 38.478 50.11 8.518 20.254 19 28 38 47 9 19 1 2 2 2 1 1 14115 15712 2590 15080 36680;36681;36682 42589;42590;42591 42591 3 NVPVITGSK Unmodified 913.52328 0.52328142 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 11.7 1.89 1 2 51.568 51.568 2;3 0.0042866 13952 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.298 49.822 246.74 352.13 344.77 332.26 186.67 0 232 352 353 326 186 0 1 2 2 2 1 0 34828 15713 1788 15081 36683;36684;36685 42592;42593;42594 42592 3 NVPYVFVR Unmodified 992.54435 0.54435122 3034 Q9D0T1 Nhp2l1 NHP2-like protein 1;NHP2-like protein 1, N-terminally processed yes yes 0 0 0 0 9 0 1 61.15 61.15 2 0.03702 18364 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.915 23.834 78.575 92.641 60.554 85.784 70.494 86.466 74 93 65 83 74 83 1 1 1 1 1 1 11505 15714 3034 15082 36686 42595 42595 1 NVQACSR Unmodified 833.38138 0.38138499 867 Q80XB4;E9PZF4;E9Q641 Nrap Nebulin-related-anchoring protein yes no 0 0 0 0 9.5 3.5 1 1 71.89 71.89 1 0.055102 26827 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 30.718 18.229 29.928 47.546 103.15 94.502 53.137 78.434 28 46 102 93 56 75 1 1 2 2 1 2 8205.6 15715 867 15083 36687;36688 42596;42597 42597 2 NVQAEEMVEFSSGLK Unmodified 1666.7872 0.78723662 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 5.85 2.11 9 3 1 81.071 81.071 2;3;4 1.6422E-11 26417 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.3 101.38 914.1 727.43 1022.5 809.02 626.05 1007.9 861 755 1020 803 645 961 11 9 9 9 10 9 91199 15716 1881 15084 36689;36690;36691;36692;36693;36694;36695;36696;36697;36698;36699;36700;36701 42598;42599;42600;42601;42602;42603;42604;42605;42606;42607;42608;42609;42610;42611;42612 42599 15 NVQALEIELQSQLALK Unmodified 1796.0044 0.0043636815 659 CON__P13645 yes yes 0 0 0 0 13 0 1 87.273 87.273 3 0.00084107 34337 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.026 17.072 39.465 26.847 16.992 39.428 0 69.29 37 28 19 37 0 65 1 1 1 1 0 1 3356.7 + 15717 659 15085 36702 42613 42613 1 NVQFVFDAVTDVIIK Unmodified 1706.9243 0.92432245 1330;622;3136 B2RSH2;P08752;Q9DC51 Gnai1;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 10.5 0.5 1 1 99.903 99.903 3 0.00028403 32621 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.374 37.077 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1942.9 15718 622;1330;3136 15086 36703;36704 42614;42615 42614 2 NVQGIIDILK Unmodified 1111.6601 0.66010926 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 80.696 80.696 2 0.0002605 25352 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.533 33.679 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 5944.5 15719 2235 15087 36705;36706 42616;42617 42617 2 NVQLEDEGIYNCYITNPPDR Unmodified 2409.0907 0.090688861 2038 Q56A07 Scn2b Sodium channel subunit beta-2 yes yes 0 0 0 0 8.5 4.5 1 1 68.662 68.662 3 9.3712E-11 24734 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.776 78.848 0 0 20.173 8.6347 19 0 0 0 19 9 19 0 0 0 1 1 1 0 5848.3 15720 2038 15088 36707;36708 42618;42619;42620 42619 3 NVQLQENEIR Unmodified 1241.6364 0.6364137 1770 P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1cc Serine/threonine-protein phosphatase PP1-gamma catalytic subunit yes no 0 0 0 0 6 4.06 1 2 1 46.036 46.036 2;3 2.1095E-05 14055 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.456 49.173 227.03 150.66 128 142.73 83.402 108.73 213 158 129 139 83 102 3 3 2 3 1 2 25104 15721 1770 15089 36709;36710;36711;36712 42621;42622;42623;42624 42624 4 NVQLTENEIR Unmodified 1214.6255 0.62551466 1710 P62137 Ppp1ca Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 0 7.33 4.03 1 1 1 48.128 48.128 2 4.5845E-09 15460 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.57 67.395 49.358 0 197.91 135.1 147.44 203.66 46 0 186 130 148 195 1 0 2 2 2 3 30890 15722 1710 15090 36713;36714;36715 42625;42626;42627 42625 3 NVQQLAILGAGLMGAGIAQVSVDK Unmodified 2352.2835 0.28351543 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 11.7 0.471 1 2 99.69 99.69 3;4 7.5736E-10 28386 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.039 52.544 39.581 0 20.125 8.6375 0 9.594 37 0 19 9 0 9 2 0 1 1 0 1 7019.8 15723 2435 15091 36716;36717;36718 42628;42629;42630 42630 3 NVQVFLISGGFR Unmodified 1335.7299 0.72992016 2866 Q99LS3;A0A0J9YVH9 Psph Phosphoserine phosphatase yes no 0 0 0 0 11.5 0.5 1 1 76.863 76.863 2 0.00064136 20583 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.954 59.397 0 0 0 0 46 37 0 0 0 0 46 37 0 0 0 0 1 1 10262 15724 2866 15092 36719;36720 42631;42632 42632 2 NVRPDYLK Unmodified 1003.5451 0.5450795 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 1 7 0 1 43.74 43.74 3 0.039752 11684 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.019 29.765 191.31 226.88 295.3 184.8 280.04 370.44 181 230 294 190 288 355 1 1 1 1 1 1 82218 15725 1336 15093 36721 42633 42633 1 NVSEELDR Unmodified 960.45124 0.45123869 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 2 0 1 40.077 40.077 2 0.046264 11918 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.157 19.477 39.144 45.384 55.091 57.925 0 49.036 37 46 56 56 0 46 1 1 1 1 0 1 5377.9 15726 2799 15094 36722 42634 42634 1 NVSIGIVGK Unmodified 885.52837 0.5283668 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 11.5 1.5 1 1 59.128 59.128 2 0.001783 15658 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.048 37.612 0 0 0 127.81 178.23 0 0 0 0 120 176 0 0 0 0 1 1 0 6788.6 15727 3313 15095 36723;36724 42635;42636 42635 2 NVSLGNVLAVAYAAK Unmodified 1488.83 0.83002813 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 11.5 0.5 1 1 83.874 83.874 2;3 1.4934E-05 23243 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.42 52.203 0 0 33.593 23.137 0 29.848 0 0 32 23 0 28 0 0 1 1 0 1 4921.5 15728 2845 15096 36725;36726 42637;42638 42638 2 NVSMFPGNPER Unmodified 1246.5765 0.57645598 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 6 0 1 53.141 53.141 2 1.2181E-08 16837 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.42 82.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15729 2727 15097 36727 42639 42639 1 NVSSAGEEAR Unmodified 1018.468 0.46795139 636 B7ZNF6;E9QKH8;O35927 Ctnnd2 Catenin delta-2 yes no 0 0 0 0 6 4.97 1 1 1 27.411 27.411 2 7.1701E-05 5978 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 106.35 72.1 68.787 127.68 123.03 117.68 94.318 63.96 65 125 125 116 93 60 2 2 2 3 1 1 18087 15730 636 15098 36728;36729;36730 42640;42641;42642 42640 3 NVSSDGAEAR Unmodified 1004.4523 0.45230133 1862 P98203 Arvcf Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog yes yes 0 0 0 0 3 0 1 26.184 26.184 2 4.9983E-07 5667 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.02 74.06 20.154 0 39.127 18.077 19.044 0 19 0 37 19 19 0 1 0 1 1 1 0 1427 15731 1862 15099 36731 42643 42643 1 NVSSLEAK Unmodified 846.4447 0.44469675 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 7.4 2.87 1 2 1 1 46.003 46.003 2;3 0.00063217 13960 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.86 54.9 325.4 316.5 405.77 270.65 407.83 575.73 306 315 398 265 417 551 3 4 4 4 4 5 76280 15732 90 15100 36732;36733;36734;36735;36736 42644;42645;42646;42647;42648;42649 42649 6 NVTAIQGPGGK Unmodified 1040.5615 0.56145784 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 46.617 46.617 2;3 2.6443E-16 14394 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 167.09 112.68 498.92 347.71 368.8 445.5 247.38 480.43 468 353 366 427 250 453 5 4 4 5 3 4 155280 15733 307 15101 36737;36738;36739;36740;36741 42650;42651;42652;42653;42654;42655 42655 6 NVTELNEPLSNEER Deamidation (N) 1643.7639 0.76385864 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 1 0 0 2.25 0.829 1 1 2 56.43 56.43 2;3 2.222E-15 18521 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.37 73.627 99.119 63.519 58.815 60.516 74.175 97.021 93 65 56 56 74 93 3 2 1 2 2 3 13574 15734 1706 15102 36742;36743;36744;36745 42656;42657;42658;42659;42660 42660 663;664 5 NVTELNEPLSNEER Unmodified 1642.7798 0.77984305 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 4.83 3.8 2 1 1 1 1 52.424 52.424 2;3 3.4695E-95 17299 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 229.4 164.49 285.24 486.43 570.05 621.28 531.05 667.09 269 482 568 600 547 640 5 8 9 8 9 11 812510 15735 1706 15102 36746;36747;36748;36749;36750;36751 42661;42662;42663;42664;42665;42666;42667;42668;42669;42670;42671 42661 11 NVTLPAVFK Unmodified 987.57532 0.57531699 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 10.2 0.829 1 1 2 70.282 70.282 2;3 0.0010158 20676 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.21 52.68 216.65 131.88 84.465 59.689 155.52 173.58 203 139 83 56 157 167 2 2 1 1 2 2 33335 15736 3093 15103 36752;36753;36754;36755 42672;42673;42674;42675 42673 4 NVTNNLK Unmodified 801.43447 0.43446642 782;926;209;2196 P21107;A0A0R4J1P2;D3Z6I8;E9Q7Q3;Q6IRU2 Tpm3;Tpm4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain no no 0 0 0 0 9.33 2.62 1 1 1 41.163 41.163 2 0.010667 9765 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.62 43.945 555.37 196.75 629.18 461.63 368.7 172.59 522 213 614 463 373 167 3 2 3 3 2 1 52635 15737 209;782;926;2196 15104 36756;36757;36758 42676;42677;42678 42677 3 NVTQTLMDTLK Unmodified 1262.654 0.6540376 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 9 0 1 73.443 73.443 2 4.561E-06 24250 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.913 52.827 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15738 63 15105 36759 42679 42679 1 NVTTSEK Unmodified 777.38685 0.38684752 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.5 0.5 1 1 33.615 33.615 2 0.02654 8077 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.305 40.589 77.932 240.87 42.97 206.42 162.58 203.23 74 232 56 194 167 195 2 2 1 2 1 2 13848 15739 510 15106 36760;36761 42680;42681 42680 2 NVTVQPDDPISFMQLTAK Unmodified 2003.0034 0.0033774035 3211 Q9JIF7 Copb1 Coatomer subunit beta yes yes 0 0 0 0 7 0 1 83.333 83.333 3 0.051935 30213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 29.766 12.277 30.044 0 0 29.921 36.338 28.811 28 0 0 28 37 28 1 0 0 1 1 1 2107.8 15740 3211 15107 36762 42682 42682 1 NVTVTDVDIVFSK Unmodified 1435.7559 0.75586013 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 8 2.61 2 1 1 1 76.907 76.907 2;3 2.2411E-21 26548 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.18 126.96 177.62 282.5 243.16 237.77 230.23 261.03 167 280 241 223 232 250 3 6 5 4 4 5 55844 15741 2291 15108 36763;36764;36765;36766;36767 42683;42684;42685;42686;42687;42688;42689 42688 7 NVTWVIVNLCR Unmodified 1372.7285 0.72853995 1188 O35344 Kpna3 Importin subunit alpha-4 yes yes 0 0 0 0 11 0 1 77.98 77.98 3 0.049566 23649 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.995 14.144 0 20.216 0 40.441 0 0 0 19 0 37 0 0 0 1 0 1 0 0 1910.2 15742 1188 15109 36768 42690 42690 1 NVVAECLGK Unmodified 988.50117 0.50116577 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 54.097 54.097 2 0.00069863 16503 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.71 73.63 127.4 165.11 175.16 105.97 170.6 27.756 120 166 176 102 167 28 2 3 3 2 2 1 28146 15743 2264 15110 36769;36770;36771 42691;42692;42693 42691 3 NVVFATGAYPR Unmodified 1193.6193 0.61930707 1011 Q8C446;F6ZYH6;P63080 Gabrb3 Gamma-aminobutyric acid receptor subunit beta-3 yes no 0 0 0 0 8.5 0.5 1 1 56.309 56.309 2 4.7117E-06 16163 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.29 70.347 39.084 45.216 65.354 46.383 0 49.036 37 46 65 46 0 46 1 1 1 1 0 1 5939.1 15744 1011 15111 36772;36773 42694;42695 42695 2 NVVFNVIEHFWR Unmodified 1558.8045 0.80448208 2670 Q8R570;B2FDF6;I7HFU4;I7HPB1;J3JS29 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 12.5 0.5 1 1 89.31 89.31 3 0.00019364 35320 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.522 53.802 20.292 18.848 0 0 29.288 0 19 19 0 0 28 0 1 1 0 0 1 0 2719.3 15745 2670 15112 36774;36775 42696;42697 42697 2 NVVLQTLEGHLR Unmodified 1377.7728 0.7728476 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 8 0 1 65.889 65.889 3 0.00012693 21378 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.088 45.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15746 2059 15113 36776 42698 42698 1 NVVLSGGSTMFR Unmodified 1266.6391 0.63905624 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 9 0 1 60.514 60.514 2 2.4598E-05 18102 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.174 73.92 0 59.584 0 70.054 52.701 77.38 0 56 0 65 56 74 0 1 0 1 1 1 8447 15747 2170 15114 36777 42699 42699 1 NVVQTGK Unmodified 744.413 0.41300269 2313 Q80U56 Avl9 Late secretory pathway protein AVL9 homolog yes yes 0 0 0 0 7 0 1 37.918 37.918 2 0.050256 8766 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.478 27.722 0 28.828 57.683 26.486 36.166 38.41 0 28 56 28 37 37 0 1 1 1 1 1 68710 15748 2313 15115 36778 42700 42700 1 NVVSQFVSSMSASADVLAMSK Unmodified 2157.0446 0.044590291 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 6.71 4.98 3 1 2 1 97.316 97.316 3;4 6.6632E-14 27862 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.73 92.729 71.457 17.86 58.725 21.886 36.272 44.423 67 21 56 21 36 42 4 3 3 2 3 3 41372 15749 2958 15116 36779;36780;36781;36782;36783;36784;36785 42701;42702;42703;42704;42705;42706;42707;42708 42708 8 NVVTIFSAPNYCYR Unmodified 1702.8137 0.81372614 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 11 0.816 1 1 1 71.523 71.523 2;3 9.4226E-29 21287 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.74 131.8 219.67 270.34 40.034 0 418.27 355.3 206 268 37 0 414 343 1 1 1 0 3 2 109340 15750 1731;1787 15117 36786;36787;36788 42709;42710;42711 42709 3 NVWSFLK Unmodified 892.48069 0.48068833 2001 Q3UPL0;S4R2A9;S4R192 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 6.5 5.5 1 1 77.256 77.256 2;3 0.010667 20672 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.62 62.638 0 237.79 252.81 271.22 236.71 328.5 0 227 258 266 249 314 0 1 2 2 2 1 27766 15751 2001 15118 36789;36790 42712;42713 42713 2 NVYDSISK Unmodified 924.45526 0.45526144 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 8 2.92 2 1 1 50.762 50.762 2;3 0.011518 14919 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.111 41.423 296.32 169.79 187.59 309.73 139.27 301.97 278 176 186 296 148 287 3 2 2 3 2 3 25439 15752 1096;1042;487;928 15119 36791;36792;36793;36794 42714;42715;42716;42717 42716 4 NVYMLATTVSSK Unmodified 1312.6697 0.66968766 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 11 0.816 1 1 1 67.923 67.923 2 9.5137E-23 19027 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 167.18 136.92 20.387 39.368 86.432 125.14 46.298 0 19 37 83 120 46 0 1 1 1 3 1 0 19493 15753 2513 15120 36795;36796;36797 42718;42719;42720 42719 3 NWASGQDLQAK Unmodified 1216.5836 0.58364985 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 0 9.5 3.5 1 1 52.206 52.206 2 2.3044E-10 17217 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.08 64.405 98.929 33.249 116.34 28.381 133.35 38.681 93 37 111 28 130 37 2 1 2 1 2 1 9610.4 15754 3380 15121 36798;36799 42721;42722 42722 2 NWFVGLK Unmodified 862.47012 0.47012364 1689 P61148 Fgf1 Fibroblast growth factor 1 yes yes 0 0 0 0 12 0 1 73.147 73.147 2 0.027535 18905 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.62 54.633 128.45 60.498 0 68.818 118.41 114.95 120 65 0 65 120 111 1 1 0 1 1 1 7354 15755 1689 15122 36800 42723 42723 1 NWLDPAK Unmodified 842.42865 0.42865276 1250;3345 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;Q9WV92;A7YY80;A0A286YCY8 Epb4.1l2;Epb41l2;Epb41l3;Epb4.1l3 Band 4.1-like protein 2;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 9.33 2.62 1 1 1 60.536 60.536 2 0.027593 18986 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.253 46.213 544.64 470.73 577.12 533.79 706.41 219.6 513 486 584 532 706 212 3 3 3 3 3 1 47776 15756 1250;3345 15123 36801;36802;36803 42724;42725;42726 42725 3 NWLDPSK Unmodified 858.42357 0.42356738 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 9 0 1 59.733 59.733 2 0.044814 17745 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.923 42.567 170.79 175.75 0 0 308.57 0 160 176 0 0 295 0 1 1 0 0 1 0 9918.2 15757 526 15124 36804 42727 42727 1 NWQVTAVNILTTTEEGYR Unmodified 2094.0382 0.038183005 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 84.734 84.734 3 1.9818E-07 30952 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.78 60.368 58.244 58.219 39.213 18.43 37.054 107.67 57 56 37 19 37 102 3 2 1 1 1 3 16942 15758 2286 15125 36805;36806;36807;36808 42728;42729;42730;42731;42732 42728 5 NWRPQLLVLVR Unmodified 1392.8354 0.83538828 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 7 6 1 1 68.27 68.27 3 0.003975 24971 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.694 43.365 0 0 116.88 72.322 84.769 0 0 0 111 74 83 0 0 0 2 2 1 0 9539.5 15759 2727 15126 36809;36810 42733;42734 42734 2 NWSAAGNAFCQAAK Unmodified 1494.6674 0.66739625 1478 P28663;D6RHL2 Napb Beta-soluble NSF attachment protein yes no 0 0 0 0 10.2 1.64 2 1 1 60.049 60.049 2;3 1.526E-10 17948 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.87 86.739 88.377 350.53 404.62 285.47 262.17 510.21 83 334 398 277 260 482 1 4 3 3 2 4 79730 15760 1478 15127 36811;36812;36813;36814 42735;42736;42737;42738;42739 42737 5 NWSAAGNAFCQAAQLHLQLQSK Unmodified 2442.1863 0.186261 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 10.3 0.471 2 1 73.709 73.709 3;4 6.0243E-16 21638 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.128 77.673 76.701 0 0 110.65 44.204 166.1 74 0 0 102 46 157 2 0 0 2 1 2 28543 15761 3106 15128 36815;36816;36817 42740;42741;42742 42742 3 NWVLVEK Unmodified 886.49125 0.49125301 1626 P55264;A0A286YCD7 Adk Adenosine kinase yes no 0 0 0 0 8.5 0.5 1 1 65.04 65.04 2 0.015633 20284 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.94 55.838 236.99 240.44 0 273.25 0 286.75 222 241 0 250 0 269 2 2 0 2 0 2 19306 15762 1626 15129 36818;36819 42743;42744 42744 2 NWVPTSK Unmodified 830.42865 0.42865276 3402 Q9Z2Y3;D3Z6A7;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 0 0 0 0 8 0 1 52.349 52.349 2 0.059848 14940 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.931 23.053 44.455 44.864 64.721 60.451 67.617 82.285 42 46 65 60 70 79 1 1 1 1 1 1 4300.1 15763 3402 15130 36820 42745 42745 1 NWYIQATCATSGDGLYEGLDWLANQLK Unmodified 3086.4444 0.44438576 1693 P61205 Arf3 ADP-ribosylation factor 3 yes yes 0 0 0 0 13 0 1 106.05 106.05 4 0.0023688 43159 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.106 17.169 20.184 18.546 18.467 38.666 0 0 19 19 19 38 0 0 1 1 1 2 0 0 2318.5 15764 1693 15131 36821 42746;42747 42746 2 NWYIQATCATSGDGLYEGLDWLSNQLR Unmodified 3130.4454 0.44544839 1833 P84078 Arf1 ADP-ribosylation factor 1 yes yes 0 0 0 0 13 0 1 101.59 101.59 3 3.9925E-10 41152 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.21 51.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15765 1833 15132 36822 42748 42748 1 NYADHVK Unmodified 845.40317 0.40316629 2631 Q8R0F8 Fahd1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 0 6 0 1 33.938 33.938 3 0.025276 7772 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.682 16.547 108.94 101.18 0 108.29 169.71 0 102 102 0 102 167 0 1 1 0 1 1 0 4494.7 15766 2631 15133 36823 42749 42749 1 NYDESGSPR Unmodified 1023.4258 0.42575222 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 2 0.816 1 1 1 28.533 28.533 2 3.5626E-05 6402 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 135.43 80.652 128.55 74.89 152.06 90.106 131.84 0 121 75 149 93 130 0 2 1 2 2 2 0 22121 15767 1692 15134 36824;36825;36826 42750;42751;42752 42751 3 NYDYSEPGR Unmodified 1099.4571 0.45705235 2673 Q8R5H1 Usp15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 0 4 0 1 38.297 38.297 2 0.012665 10714 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.042 44.904 0 0 29.01 28.875 0 29.848 0 0 28 28 0 28 0 0 1 1 0 1 1879.8 15768 2673 15135 36827 42753 42753 1 NYEFMWNPHLGYILTCPSNLGTGLR Unmodified 2952.4051 0.4051039 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 11.2 1.17 2 1 1 1 84.876 84.876 3;4 1.937E-08 23689 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.015 50.914 9 29.792 47.659 47.438 0 39.442 9 28 46 46 0 37 1 1 1 1 0 1 51852 15769 1883 15136 36828;36829;36830;36831;36832 42754;42755;42756;42757;42758;42759 42758 6 NYELHPDK Unmodified 1014.4771 0.47705951 1049 F8WIR1;P18242;F6Y6L6;A0A1B0GT66 Ctsd Cathepsin D yes no 0 0 0 0 5 0 1 40.68 40.68 3 0.035316 11401 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.938 13.051 127.88 98.839 63.755 0 0 148.17 120 102 65 0 0 139 1 1 1 0 0 1 16612 15770 1049 15137 36833 42760 42760 1 NYEYYASHVPESVK Unmodified 1684.7733 0.77330111 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 5.75 0.829 2 1 1 55.362 55.362 3;4 2.8006E-05 18559 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.022 58.915 177.23 220.62 281.36 119.07 217.94 155.88 167 223 278 120 213 149 3 4 4 2 3 3 19283 15771 255;3362 15138 36834;36835;36836;36837 42761;42762;42763;42764 42761 4 NYFNLPDIY Unmodified 1157.5393 0.53932542 2021 Q3V156;Q91XL9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 0 13 0 1 90.042 90.042 2 0.0086816 35695 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.058 37.013 59.015 49.594 24.762 88.038 64.06 37.614 55 47 28 83 65 37 1 1 1 2 1 1 5089.7 15772 2021 15139 36838 42765;42766 42765 2 NYGPEVWEDIKK Unmodified 1476.7249 0.72489436 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 1 6.5 0.5 1 1 64.837 64.837 3 0.034155 21486 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.507 25.929 48.746 34.854 121.09 143.86 44.995 97.854 46 37 120 139 46 93 1 1 2 2 1 2 6135.5 15773 1221 15140 36839;36840 42767;42768 42768 2 NYHIFYQLCASAK Unmodified 1613.766 0.76604767 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 10 0 1 62.164 62.164 3 0.0016465 16991 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.409 41.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15774 728 15141 36841 42769 42769 1 NYITEDELR Unmodified 1151.5459 0.54586736 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 4 0.816 1 1 1 51.538 51.538 2 8.5456E-06 16983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 153.05 97.515 157.97 63.176 86.174 162.17 228.29 171.49 148 65 83 157 231 166 2 1 1 3 3 2 33250 15775 418 15142 36842;36843;36844 42770;42771;42772 42771 3 NYIVEDGDIIFFK Unmodified 1571.7872 0.78716026 2999 Q9CZ30 Ola1 Obg-like ATPase 1 yes yes 0 0 0 0 13 0 1 82.507 82.507 3 0.0051293 31990 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.929 27.396 69.745 0 0 69.649 74.205 0 65 0 0 65 74 0 1 0 0 1 1 0 8923.5 15776 2999 15143 36845 42773 42773 1 NYLDWLTSIPWGR Unmodified 1619.8096 0.80962704 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 99.619 99.619 3 0.00138 28343 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.185 45.221 9.657 0 0 0 0 26.792 9 0 0 0 0 26 1 0 0 0 0 2 3027.8 15777 2539 15144 36846;36847 42774;42775 42775 2 NYLLSLPHK Unmodified 1083.6077 0.60767975 1769 P63085;A0A338P736 Mapk1 Mitogen-activated protein kinase 1 yes no 0 0 0 0 8.6 3.93 1 1 1 1 1 60.518 60.518 3 0.00012581 15644 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.33 54.986 600.95 508.67 622.1 495.32 389.5 605.75 565 519 609 471 389 574 5 5 4 4 3 5 245180 15778 1769 15145 36848;36849;36850;36851;36852 42776;42777;42778;42779;42780;42781;42782 42780 7 NYLLVYYPHVVVPPLPEKR Unmodified 2295.278 0.27795977 2771 Q91YJ2;A0A338P7D2 Snx4 Sorting nexin-4 yes no 0 0 0 1 12 0 1 74.434 74.434 4 0.049845 19508 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 29.136 20.312 48.799 44.717 56.049 36.227 46.452 0 46 46 56 37 46 0 1 1 1 1 1 0 2882.2 15779 2771 15146 36853 42783 42783 1 NYLQSLPSK Unmodified 1048.5553 0.55530983 769 D3Z3G6;Q63844;D3Z6D8;A0A0U1RPZ0 Mapk3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 yes no 0 0 0 0 10.5 2.5 1 1 58.228 58.228 3 0.0075075 17862 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.433 39.336 169.07 92.255 0 219.94 161.27 96.345 158 93 0 204 167 93 2 1 0 2 2 1 10368 15780 769 15147 36854;36855 42784;42785 42784 2 NYLSLAPLFFK Unmodified 1311.7227 0.72270951 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 4.67 5.19 2 1 94.591 94.591 2;3 0.00049018 26748 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.659 52.544 38.843 37.709 38.688 0 0 20.254 37 37 38 0 0 19 3 1 2 0 0 1 5477.1 15781 1220 15148 36856;36857;36858 42786;42787;42788 42788 3 NYLSQPR Unmodified 876.44537 0.44536545 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 9.33 2.62 1 1 1 38.099 38.099 2 0.017956 8421 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.86 57.179 786.33 76.985 867.18 889.12 1002.3 965.98 738 79 846 878 1029 933 3 1 3 3 3 3 188190 15782 1741 15149 36859;36860;36861 42789;42790;42791 42790 3 NYLSSDVEVR Unmodified 1180.5724 0.57241646 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 5 0.816 1 1 1 50.876 50.876 2 0.00081236 16767 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.309 47.122 29.856 37.355 49.772 71.045 28.291 66.041 28 37 46 65 28 65 1 1 1 1 1 2 22581 15783 2179 15150 36862;36863;36864 42792;42793;42794 42792 3 NYNDELQFLDK Unmodified 1397.6463 0.64630969 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 6 0 1 70.948 70.948 3 0.022851 25233 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.88 28.255 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15784 2862 15151 36865 42795 42795 1 NYNQPSEVTDR Unmodified 1321.5899 0.58985744 1986 Q3UHL1;A0A0A6YW88;A0A0A6YXI7;A0A0A6YW08 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 3 0.816 1 1 1 36.681 36.681 2 4.6551E-14 10477 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 158.47 118.47 39.321 26.311 49.652 19 55.885 78.355 37 28 47 19 56 75 1 2 1 1 2 2 13503 15785 1986 15152 36866;36867;36868 42796;42797;42798 42797 3 NYNQPSEVTDRYDLGQVIK Unmodified 2238.0917 0.091675139 1986 Q3UHL1;A0A0A6YW88;A0A0A6YXI7;A0A0A6YW08 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 1 7.5 3.2 1 2 1 61.242 61.242 3;4 1.0325E-10 21464 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.975 54.827 177.84 78.3 160.71 104.5 191.81 214.24 167 83 158 102 195 203 3 2 3 2 3 2 20921 15786 1986 15153 36869;36870;36871;36872 42799;42800;42801;42802 42802 4 NYPEGHQAAAVLPVLDLAQR Unmodified 2161.128 0.12800107 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 0 6.67 0.471 1 2 68.663 68.663 3;4 2.6191E-08 23284 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.651 52.327 29.872 20.216 68.893 49.651 28.291 78.077 28 19 65 47 28 74 1 1 2 2 1 2 24830 15787 3074 15154 36873;36874;36875 42803;42804;42805 42805 3 NYPESYPQLPR Unmodified 1362.6568 0.65681479 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 5 0 1 54.39 54.39 2 0.0034773 18036 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.552 46.783 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 1495.3 15788 2511 15155 36876 42806 42806 1 NYPNTFWMNPQYLIK Unmodified 1927.9291 0.92909025 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 10 0 1 86.528 86.528 3 3.7732E-05 27860 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.98 53.698 40.448 27.918 31.167 37.732 65.13 32.821 38 28 32 37 65 32 2 1 1 1 2 1 6745.1 15789 1155 15156 36877 42807;42808 42808 2 NYPPVVFK Unmodified 962.52255 0.52255314 19 A0A087WPR1;P20917;Q3ZB60;A0A087WRD6 Mag Myelin-associated glycoprotein yes no 0 0 0 0 8.5 0.5 1 1 62.589 62.589 2 0.0051541 19183 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.6 72.623 177.67 272.42 166.53 165.08 222.33 235.39 167 269 167 158 222 223 2 3 3 2 2 2 18868 15790 19 15157 36878;36879 42809;42810;42811;42812 42812 4 NYPVVSIEDPFDQDDWAAWSK Unmodified 2481.1125 0.11247016 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 7.6 2.84 2 3 2 1 2 93.562 93.562 3;4 2.2389E-19 33935 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.755 77.917 168.48 146.93 302.42 160.97 201.33 259.56 158 150 288 158 199 246 6 7 7 7 6 7 253060 15791 1399 15158 36880;36881;36882;36883;36884;36885;36886;36887;36888;36889 42813;42814;42815;42816;42817;42818;42819;42820;42821;42822;42823;42824;42825;42826;42827;42828 42825 16 NYSMIVNNLLKPISVESSSK Unmodified 2222.1617 0.16166896 2990 Q9CXW3 Cacybp Calcyclin-binding protein yes yes 0 0 0 1 11 0 1 81.88 81.88 3 6.2709E-05 25496 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.073 44.984 0 48.007 56.059 37.1 0 0 0 46 56 37 0 0 0 1 1 1 0 0 4935.2 15792 2990 15159 36890 42829 42829 1 NYSNLLAFCR Unmodified 1256.5972 0.59719142 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 9.5 0.5 1 1 66.58 66.58 2 0.00034975 18895 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.957 67.618 99.325 0 201.45 178.66 90.716 59.696 93 0 194 176 93 56 1 0 2 2 1 1 16889 15793 1265 15160 36891;36892 42830;42831 42831 2 NYTDDAIETDDLTIK Unmodified 1725.7945 0.79449006 3399 Q9Z2U0;A0A338P7D7 Psma7 Proteasome subunit alpha type-7 yes no 0 0 0 0 3 0.816 1 1 1 67.306 67.306 3 1.6975E-17 24179 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.44 101.05 88.551 45.518 46.843 61.208 75.701 97.235 83 46 46 56 74 93 2 1 1 1 2 2 30362 15794 3399 15161 36893;36894;36895 42832;42833;42834 42834 3 NYTDNELEK Deamidation (N) 1125.4826 0.4825984 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 1 0 0 2.67 0.471 1 2 50.053 50.053 2;3 0.0034655 17104 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.749 33.382 69.299 0 115.04 105.81 101.1 95.187 65 0 111 102 102 92 2 0 3 2 2 3 9246.7 15795 1458 15162 36896;36897;36898 42835;42836;42837 42837 538;539 3 NYTDNELEK Unmodified 1124.4986 0.49858282 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 4 0.816 1 1 1 47.344 47.344 2;3 6.3368E-05 14910 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.27 86.079 381.05 202.8 111.19 172.75 109.41 243.12 371 203 111 166 111 231 3 3 1 2 1 3 97285 15796 1458 15162 36899;36900;36901 42838;42839;42840;42841 42839 4 NYTDVYDK Unmodified 1016.4451 0.44509068 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 8 3.56 1 1 1 50.018 50.018 2 0.0081106 16193 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.7 64.738 118.39 55.073 73.626 64.933 166.44 153.02 111 56 74 65 167 148 2 1 1 1 2 2 11915 15797 3307 15163 36902;36903;36904 42842;42843;42844 42844 3 NYTDVYDKNNLLTNK Unmodified 1813.8846 0.88464248 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 1 10.2 2.77 1 1 2 61.152 61.152 3;4 8.9706E-11 19203 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.4 93.92 207.5 260.63 120.99 50.278 199.96 174.83 195 260 120 46 194 166 2 3 1 1 2 2 23991 15798 3307 15164 36905;36906;36907;36908 42845;42846;42847;42848 42846 4 NYVENRPK Unmodified 1018.5196 0.51959303 2327 Q80W82;Q3TQZ7;Q8C9D4;Q80W80;E9QN59;Q61831;Q9WTU6 Mapk10;Mapk9 Mitogen-activated protein kinase;Mitogen-activated protein kinase 10;Mitogen-activated protein kinase 9 yes no 0 0 0 1 7 0 1 33.115 33.115 3 0.054356 6735 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.258 25.461 138.79 138.54 0 129.17 105.88 124.9 130 139 0 120 111 120 1 1 0 1 1 1 6375.5 15799 2327 15165 36909 42849 42849 1 NYVLNYLATRPK Unmodified 1450.7932 0.79324869 383 A0A2I3BQV5;E9PUW7;Q9EPK7 Xpo7 Exportin-7 yes no 0 0 0 1 1 0 1 63.224 63.224 3 4.75E-07 21131 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.79 74.576 68.912 93.285 61.005 75.899 71.608 67.247 65 93 65 74 74 65 1 1 1 1 1 1 6097.1 15800 383 15166 36910 42850 42850 1 NYVMIDDISELTK Unmodified 1539.7491 0.7490602 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 6 0 1 80.225 80.225 3 0.00032254 29527 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.809 42.685 29.786 17.735 28.255 18.548 28.436 0 28 19 28 19 28 0 1 1 1 1 1 0 3394.2 15801 1275 15167 36911 42851 42851 1 NYVQGINLVQAK Unmodified 1345.7354 0.73539946 3108 Q9DB15 Mrpl12 39S ribosomal protein L12, mitochondrial yes yes 0 0 0 0 9 0 1 64.275 64.275 2 1.316E-17 19921 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 143.39 109.52 0 29.792 0 29.591 53.844 67.754 0 28 0 28 55 65 0 1 0 1 1 1 5087.4 15802 3108 15168 36912 42852 42852 1 NYVTPVNR Unmodified 961.49813 0.49812931 585 Q60631;B1AT92 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 6 0 1 38.826 38.826 2 0.030758 10143 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.877 32.335 89.059 0 0 0 73.742 106.63 83 0 0 0 74 102 1 0 0 0 1 1 8410.7 15803 585 15169 36913 42853 42853 1 NYYEQWGK Unmodified 1086.4771 0.47705951 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 9 2.89 1 2 1 2 55.816 55.816 2;3 0.0050889 18888 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.89 50.687 572.53 537.7 850.33 549.59 762.23 738.31 540 555 841 555 773 713 5 6 6 5 5 6 111800 15804 1271 15170 36914;36915;36916;36917;36918;36919 42854;42855;42856;42857;42858;42859 42859 6 NYYGYQGYR Unmodified 1182.5094 0.50942227 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 7 0 1 45.595 45.595 2 0.0027638 12498 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.561 72.286 48.924 15.924 59.39 0 58.576 0 46 19 56 0 56 0 1 1 1 0 1 0 2706.3 15805 1873 15171 36920 42860 42860 1 PAAQPSAR Unmodified 796.41915 0.4191507 2277 Q791T5 Mtch1 Mitochondrial carrier homolog 1 yes yes 0 0 0 0 6 0 1 24.742 24.742 2 0.026742 3931 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.255 31.009 29.839 0 34.474 0 13.816 24.124 28 0 32 0 14 23 1 0 1 0 1 1 1490.5 15806 2277 15172 36921 42861 42861 1 PADAGTYR Unmodified 849.39808 0.39808091 195 G3UYZ1;A0A0R4J117;Q8R366;A0A0A6YWK7 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 4 0 1 32.522 32.522 2 0.0078284 8042 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.44 78.498 0 59.584 0 100.31 71.182 47.005 0 56 0 93 74 46 0 1 0 1 1 1 7708 15807 195 15173 36922 42862 42862 1 PADEIAVDR Unmodified 984.48762 0.4876242 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 2.5 0.5 1 1 44.766 44.766 2 0.010379 14289 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.92 64.548 59.413 83.257 126.36 178.25 174.01 107.49 56 84 125 172 176 102 1 3 2 3 3 2 31132 15808 2131 15174 36923;36924 42863;42864;42865;42866 42866 4 PAEIDSLWEISK Unmodified 1386.7031 0.70309628 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 80.746 80.746 3 1.1659E-05 29859 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.103 58.677 78.675 16.602 108.19 41.89 103.14 47.458 74 19 103 46 102 46 2 1 2 2 2 1 5964.8 15809 680 15175 36925;36926 42867;42868 42867 2 PAGGPKPPSGK Unmodified 991.54508 0.5450795 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 1 8 0 1 36.841 36.841 3 0.031407 7829 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.09 32.27 0 0 0 94.259 102.36 0 0 0 0 88 102 0 0 0 0 1 1 0 5879 15810 1543 15176 36927 42869 42869 1 PAILHSLK Unmodified 877.53854 0.53853756 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 12 0 1 52.766 52.766 3 0.023735 11413 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.676 30.733 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15811 2041 15177 36928 42870 42870 1 PAINVGLSVSR Unmodified 1111.635 0.63495714 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 58.436 58.436 2;3 1.7065E-05 17980 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.43 71.542 207.14 0 252.06 337.38 459.09 390.91 194 0 240 324 463 379 4 0 3 5 5 5 34419 15812 1881 15178 36929;36930;36931;36932;36933 42871;42872;42873;42874;42875;42876 42871 6 PALELLEPIEQK Unmodified 1378.7708 0.77078192 2132 Q61598;A0A1Y7VLG4 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 6 0 1 81.783 81.783 3 0.019482 30298 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.915 27.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15813 2132 15179 36934 42877 42877 1 PALFVPEVSFELLVK Unmodified 1686.9596 0.95964532 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 13 0 1 102.65 102.65 3 0.026738 41658 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 38.366 24.687 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15814 815;2590 15180 36935 42878 42878 1 PAPILESSFK Unmodified 1087.5914 0.59136099 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 8 0 1 66.394 66.394 3 0.0013651 21590 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.349 52.569 59.586 34.427 55.244 66.943 43.033 58.468 56 37 56 65 46 56 1 1 1 1 1 1 3999.5 15815 3249 15181 36936 42879 42879 1 PAPPQQEGPPEQQPPQ Unmodified 1723.8166 0.81656291 1139 J3QJX3;Q9Z2G6 Sel1l Protein sel-1 homolog 1 yes no 0 0 0 0 2 0 1 46.055 46.055 3 0.055144 14403 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 30.739 5.4173 0 20.216 0 9.4965 18.101 38.925 0 19 0 9 19 37 0 1 0 1 1 1 920.28 15816 1139 15182 36937 42880 42880 1 PAQQDGEPAWGSGAGAGVTSSR Unmodified 2084.9512 0.95115891 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 4.5 0.5 1 1 49.983 49.983 3 4.664E-16 16299 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.128 78.64 29.922 0 20.51 30.079 27.906 0 28 0 19 28 28 0 2 0 1 1 1 0 8030.9 15817 2583 15183 36938;36939 42881;42882 42881 2 PASPALSEGSSSEATTPVISSVAER Unmodified 2429.1922 0.19217704 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4 0.816 1 1 1 61.036 61.036 3 5.9819E-08 21402 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.687 51.733 0 19.152 0 9.837 0 40.508 0 18 0 9 0 38 0 2 0 1 0 2 8214.2 15818 510 15184 36940;36941;36942 42883;42884;42885 42884 3 PDSWDKDVYPEPPSR Unmodified 1786.8162 0.81622856 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 1 4.67 0.471 1 2 57.518 57.518 3;4 5.4402E-05 19618 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.759 58.028 59.76 134.29 0 48.895 112.25 86.379 56 130 0 46 111 83 1 3 0 1 2 2 16849 15819 3151 15185 36943;36944;36945 42886;42887;42888 42888 3 PEEVEAEAVNR Unmodified 1241.5888 0.58879481 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 1 0 1 46.237 46.237 2 0.010109 13640 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.398 38.25 9.6047 0 8.7878 20.243 0 0 9 0 9 19 0 0 1 0 1 1 0 0 2412.2 15820 1158 15186 36946 42889 42889 1 PEGGAVLALGLLGPVTR Unmodified 1618.9406 0.94064121 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 10.5 0.5 1 1 86.513 86.513 3 9.8836E-05 27751 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.827 52.799 0 29.478 18.789 0 18.867 29.31 0 28 19 0 19 28 0 1 1 0 1 1 4623.2 15821 2077 15187 36947;36948 42890;42891 42890 2 PEGLPHITDVVLDK Unmodified 1531.8246 0.8246084 119 A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6;A0A0J9YVC1;A0A0J9YUC1;E9Q770 Eif4g1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 0 9.5 0.5 1 1 103.43 103.43 3 0.027753 33276 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.366 7.9277 9.5015 14.017 48.883 0 22.909 33.458 9 14 46 0 23 32 1 1 2 0 1 1 13988 15822 119 15188 36949;36950 42892;42893 42893 2 PENVASR Unmodified 771.38752 0.38751622 1824 P80315;G5E839;G3UYW5;G3UXF3;G3UXG2 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 4 0 1 28.82 28.82 2 0.02823 6279 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.696 34.345 48.825 0 89.56 0 0 78.884 46 0 83 0 0 74 1 0 1 0 0 1 12635 15823 1824 15189 36951 42894 42894 1 PEQSNDYR Unmodified 1007.4308 0.4308376 2055;748 D3Z0Z5;Q91Z61;Q5PR73 Diras1;Diras2 GTP-binding protein Di-Ras1;GTP-binding protein Di-Ras2 no no 0 0 0 0 6 4.97 1 1 1 29.06 29.06 2 0.0068498 6634 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.01 65.705 39.564 27.124 76.681 146.27 115.77 88.144 37 28 74 140 120 84 1 1 2 3 3 2 15521 15824 748;2055 15190 36952;36953;36954 42895;42896;42897;42898 42895 4 PFFGIVPVLMDEK Unmodified 1490.7843 0.78432349 2882 Q99NB1 Acss1 Acetyl-coenzyme A synthetase 2-like, mitochondrial yes yes 0 0 0 0 10 0 1 97.973 97.973 3 0.045845 32029 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.594 22.394 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 758.69 15825 2882 15191 36955 42899 42899 1 PFFGYNFGR Unmodified 1103.5189 0.51886475 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 6.5 5.5 1 1 72.615 72.615 2 0.0074445 18660 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.616 57.088 39.474 0 38.135 38.168 65.675 116.45 37 0 37 37 65 111 1 0 1 1 1 2 9664.3 15826 172 15192 36956;36957 42900;42901 42901 2 PFFVEVSLPYSVVRGEAFMLK Unmodified 2414.2708 0.27082548 1479 P28665 Mug1 Murinoglobulin-1 yes yes 0 0 0 1 8 0 1 72.292 72.292 4 0.008417 24380 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.577 16.774 0 0 97.824 62.908 122.63 0 0 0 93 65 120 0 0 0 1 1 1 0 9165.6 15827 1479 15193 36958 42902 42902 1 PFGCVTLGDKK Unmodified 1220.6223 0.62234354 1986 Q3UHL1;A0A0A6YW88;A0A0A6YXI7;A0A0A6YW08 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 1 10 0.816 1 1 1 58.572 58.572 3 0.014164 17340 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.569 24.025 425.9 123.99 269.28 299.03 209.4 470.53 399 130 263 287 213 447 3 1 2 2 1 3 27069 15828 1986 15194 36959;36960;36961 42903;42904;42905 42903 3 PFGVALLFGGVDEK Unmodified 1447.7711 0.77111627 3400 Q9Z2U1 Psma5 Proteasome subunit alpha type-5 yes yes 0 0 0 0 11 0.816 1 1 1 92.834 92.834 3 6.7994E-05 30229 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.617 62.388 9.657 58.781 48.033 0 189.35 95.65 9 56 46 0 185 93 1 2 1 0 5 3 15757 15829 3400 15195 36962;36963;36964 42906;42907;42908;42909;42910 42906 5 PFLDIQK Unmodified 859.48035 0.48035398 2869 Q99LY9;B1ARW4 Ndufs5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5;NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed yes no 0 0 0 0 9 0 1 67.645 67.645 2 0.010714 21584 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.52 37.676 0 0 0 0 190.96 196.02 0 0 0 0 189 189 0 0 0 0 1 1 23967 15830 2869 15196 36965 42911 42911 1 PFPQVIK Unmodified 827.49052 0.49052473 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 9 0 1 63.243 63.243 2 0.017425 19433 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.673 28.712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15831 1309 15197 36966 42912 42912 1 PFSNSHNTQK Unmodified 1158.5418 0.54178503 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 9.5 1.71 1 1 1 1 1 1 34.066 34.066 3 2.3942E-09 6226 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.04 117.63 461.35 148.5 280.23 352.18 458.09 413.62 432 153 269 343 468 398 7 3 5 6 8 5 43342 15832 1883 15198 36967;36968;36969;36970;36971;36972 42913;42914;42915;42916;42917;42918;42919;42920;42921 42916 9 PGFGYGGR Unmodified 809.38204 0.38203692 991 F6RT34;F6VME3;F7A0B0;F6ZIA4 Mbp yes no 0 0 0 0 7.5 0.5 1 1 43.838 43.838 2 0.00017728 10953 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 158.16 126.09 389.82 422.71 128.28 78.767 710.86 668.35 366 424 130 83 705 646 2 2 1 1 2 2 39939 15833 991 15199 36973;36974 42922;42923 42923 2 PGGLLLGDEAPNFEANTTIGR Unmodified 2141.0753 0.075296793 2194 Q6GT24;O08709;A0A0A6YXQ7 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 7 2.77 2 2 1 1 77.519 77.519 3 9.4178E-12 27236 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.03 80.889 198.6 206.42 83.864 204.99 294.77 239.74 186 206 84 194 297 232 4 5 3 3 5 4 71936 15834 2194 15200 36975;36976;36977;36978;36979;36980 42924;42925;42926;42927;42928;42929;42930 42928 7 PGGWNTGGSR Unmodified 987.45224 0.45224175 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 7 0 1 38.353 38.353 2 0.043329 9075 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.517 38.754 48.905 35.298 46.206 26.968 46.877 0 46 37 46 28 46 0 1 1 1 1 1 0 2746.4 15835 1307 15201 36981 42931 42931 1 PGHYDILYK Unmodified 1104.5604 0.56039521 2293 Q7TQI3;D3YWF6 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 0 7.5 0.5 1 1 53.813 53.813 3 0.00074507 16426 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.948 47.759 157.44 105.13 140.79 56.252 116.11 78.884 148 111 139 56 111 74 2 2 2 1 1 1 12717 15836 2293 15202 36982;36983 42932;42933 42932 2 PGIVELPTLEELKVEEVK Unmodified 2021.1296 0.12962377 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 1 9.33 2.62 1 1 1 82.321 82.321 4 1.57E-13 29862 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 121.82 106.39 169.26 54.9 76.739 223.42 256.06 133.65 158 56 74 213 259 130 2 1 1 3 3 2 18907 15837 3145 15203 36984;36985;36986 42934;42935;42936 42934 3 PGLVVVHTEDGTTTK Unmodified 1552.8097 0.80968662 3060 Q9D3D9;D3Z7S4 Atp5d ATP synthase subunit delta, mitochondrial yes no 0 0 0 0 7 0 1 50.714 50.714 3 0.03085 14831 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.757 15.918 49.225 26.473 0 48.864 75.159 0 46 28 0 46 74 0 1 1 0 1 1 0 2736.2 15838 3060 15204 36987 42937 42937 1 PGQDIRPIGHDIK Unmodified 1444.7787 0.77866126 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 1 6 0 1 45.535 45.535 4 0.010987 13228 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.14 23.349 78.589 0 136.66 80.863 90.943 76.289 74 0 130 83 93 74 1 0 1 1 1 1 3164 15839 416 15205 36988 42938 42938 1 PGSAAQTPR Unmodified 883.45118 0.45117911 2212 Q6P1J1;Q71H75 Crmp1 yes no 0 0 0 0 5 0 1 27.286 27.286 2 0.014352 5137 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.1 24.382 20.27 23.105 0 24.808 17.58 33.61 19 23 0 23 19 32 1 1 0 1 1 1 4129.6 15840 2212 15206 36989 42939 42939 1 PHPYPALTPEQK Unmodified 1376.7089 0.70885036 1309 P05064;D3YWI1;D3Z510;A0A0U1RPN8 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 8.44 3.13 2 1 2 1 1 2 46.739 46.739 2;3;4 3.7739E-14 12333 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.07 92.48 1143.9 961.73 998.57 1217.7 1338.8 1369.2 1075 987 977 1166 1366 1317 8 9 7 9 9 8 352410 15841 1309 15207 36990;36991;36992;36993;36994;36995;36996;36997;36998 42940;42941;42942;42943;42944;42945;42946;42947;42948;42949;42950;42951;42952 42949 13 PHSIDGR Unmodified 780.38785 0.38785057 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 4 0 1 24.742 24.742 2 0.027006 4575 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.903 41.142 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 1048.7 15842 1271 15208 36999 42953 42953 1 PHSYPALSAEQK Unmodified 1326.6568 0.65681479 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 7 0.707 1 2 1 43.237 43.237 3;4 1.8557E-23 12240 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 167.2 135.6 206.86 47.118 390.77 370.75 356.38 396.28 194 56 380 362 370 380 2 1 4 3 4 3 40763 15843 1308 15209 37000;37001;37002;37003 42954;42955;42956;42957 42954 4 PIIILGPTK Unmodified 950.61645 0.61645353 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 0 9.25 4.82 1 1 1 1 70.582 70.582 2;3 2.8588E-05 24083 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.85 135.7 200.73 214.67 522.88 465.46 28.144 451.18 189 221 509 452 28 424 3 4 5 5 1 5 96175 15844 407 15210 37004;37005;37006;37007 42958;42959;42960;42961;42962;42963 42959 6 PIILVGPSLK Unmodified 1035.6692 0.66921738 200 A2A542;A2A545;A2A543;A0A0R4J194;Q8R3Z5 Cacnb1 Voltage-dependent L-type calcium channel subunit beta-1 yes no 0 0 0 0 1 0 1 75.343 75.343 2 0.015481 25978 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.91 15.829 0 0 0 90.966 44.983 0 0 0 0 84 47 0 0 0 0 1 1 0 1317 15845 200 15211 37008 42964 42964 1 PILYSNWLSK Unmodified 1219.6601 0.66010926 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 1 0 1 79.267 79.267 2 0.0012392 27605 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.867 60.793 39.469 0 39.013 18.442 0 20.254 37 0 37 19 0 19 1 0 1 1 0 1 2722.4 15846 3204 15212 37009 42965 42965 1 PIPGNWNGAGCHTNFSTK Deamidation (N) 1957.8741 0.87409456 1383 P15105 Glul Glutamine synthetase yes yes 0 1 0 0 7.5 0.5 1 1 58.81 58.81 3 4.8658E-07 18702 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.007 69.861 88.4 45.061 72.632 96.227 0 0 83 46 74 92 0 0 2 1 2 2 0 0 10990 15847 1383 15213 37010;37011 42966;42967 42966 451 2 PISQGGIHGR Unmodified 1020.5465 0.54647648 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8 2.16 1 1 1 30.814 30.814 3 0.0023422 6400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.694 30.573 79.402 116.36 104.24 204.83 227.33 172.86 74 111 108 197 232 167 1 2 2 3 3 2 13915 15848 1458 15214 37012;37013;37014 42968;42969;42970 42968 3 PITEMLPGILSQLGADSLTSLR Unmodified 2311.2457 0.24573294 2929 Q9CQH7 Btf3l4 Transcription factor BTF3 homolog 4 yes yes 0 0 0 0 11 0 1 108.21 108.21 3 0.0010386 35451 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.384 32.138 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 1302.4 15849 2929 15215 37015 42971 42971 1 PITIFQERDPTNIK Unmodified 1670.8992 0.89917033 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W8;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 8.5 0.5 1 1 64.442 64.442 3;4 0.00012514 19912 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.633 40.477 168.85 183.66 107.54 230.79 223.7 0 158 185 102 215 224 0 1 2 1 1 1 0 24498 15850 1395;3448 15216 37016;37017 42972;42973 42973 2 PIWLQIAESAYR Unmodified 1445.7667 0.76669959 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 11.3 0.471 2 1 86.803 86.803 2;3 2.1005E-18 24522 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 151.07 113.35 83 19 76.296 0 0 20.254 83 19 74 0 0 19 1 1 2 0 0 1 37561 15851 2396 15217 37018;37019;37020 42974;42975;42976;42977;42978 42978 5 PIWYVGR Unmodified 889.48102 0.48102268 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 11 0 1 62.609 62.609 2 0.032093 16817 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.609 46.476 0 0 363.64 313.88 0 0 0 0 349 307 0 0 0 0 1 1 0 0 24144 15852 628 15218 37021 42979 42979 1 PLENLEEEGLPK Unmodified 1366.698 0.6980109 2829 Q99JI4 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes yes 0 0 0 0 3 0 1 70.293 70.293 3 0.013515 26085 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.257 34.152 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 952.67 15853 2829 15219 37022 42980 42980 1 PLESSQVK Unmodified 886.476 0.47599688 3372 Q9Z1A1;B8JJG7;B8JJG8;B8JJG6;F6QJV5 Tfg yes no 0 0 0 0 6 0 1 45.343 45.343 2 0.019545 13157 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.516 37.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2642.9 15854 3372 15220 37023 42981 42981 1 PLGFWTK Unmodified 847.45922 0.4592246 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 1 0 1 72.689 72.689 2 0.038668 24719 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.741 45.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15855 732 15221 37024 42982 42982 1 PLISVYSEK Unmodified 1034.5648 0.56481189 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 9 0 1 64.014 64.014 2 0.021823 19889 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.419 31.198 0 48.944 0 50.278 0 0 0 46 0 46 0 0 0 1 0 1 0 0 7192.8 15856 3093 15222 37025 42983 42983 1 PLIVGSK Unmodified 712.44833 0.44832557 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 11 0 1 54.234 54.234 2 0.026985 13274 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.673 52.028 178.81 76.255 0 117.94 179.72 0 167 83 0 111 177 0 1 1 0 1 1 0 10454 15857 3203 15223 37026 42984 42984 1 PLLPATTTK Unmodified 940.55933 0.55933258 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 10.5 0.5 1 1 56.472 56.472 2 0.0012609 14450 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.17 56.261 69.387 0 60.242 56 0 78.884 65 0 56 56 0 74 1 0 1 1 0 1 11601 15858 814 15224 37027;37028 42985;42986 42985 2 PLLQVTSPVLQR Unmodified 1349.8031 0.8030851 558 A6MDD2;Q60673;A0A087WPU7;A0A087WQF2 Ptprn Receptor-type tyrosine-protein phosphatase-like N yes no 0 0 0 0 11.5 0.5 1 1 69.759 69.759 2 0.00026201 19942 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.806 24.321 0 57.566 38.86 0 0 0 0 57 37 0 0 0 0 2 1 0 0 0 7131.2 15859 558 15225 37029;37030 42987;42988 42987 2 PLPQGDVTALFLGPPGSGK Unmodified 1849.9938 0.993799 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 10 0 1 84.148 84.148 3 0.0012621 26763 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.534 26.028 0 9.0786 29.751 0 0 29.848 0 9 28 0 0 28 0 1 1 0 0 1 1880 15860 2725 15226 37031 42989 42989 1 PLPVPPELAPFVGR Unmodified 1487.85 0.85003529 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 9 0 1 86.981 86.981 3 0.0085032 30630 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.761 20.156 30.006 7.5527 0 0 0 40.508 28 9 0 0 0 38 1 1 0 0 0 1 1609.7 15861 607 15227 37032 42990 42990 1 PLSSLTPLILAAK Unmodified 1322.8173 0.81733818 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 0 6.5 5.5 1 1 88.58 88.58 3 0.0089606 32133 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.991 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15862 2556 15228 37033;37034 42991;42992 42991 2 PLVALLDGR Unmodified 952.57057 0.57056597 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YUR5;Q91YZ2;P56546;A0A0J9YVI3;E9PWQ9;A0A0J9YU66;E9Q0T4;A0A0J9YVC3 Ctbp1;Ctbp2 C-terminal-binding protein 1;C-terminal-binding protein 2 yes no 0 0 0 0 11.5 0.5 1 1 76.45 76.45 2 0.00058284 20511 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.99 71.95 48.75 180.18 227.24 115.94 198.06 273.55 46 176 223 111 194 271 1 3 3 2 2 2 38443 15863 114 15229 37035;37036 42993;42994;42995;42996;42997 42997 5 PLVATVGLNVPASVR Unmodified 1491.8773 0.87731267 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 9.25 4.82 1 1 1 1 71.148 71.148 2;3 4.9065E-32 18139 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 168.02 129.61 207.76 193.44 83.887 208.4 269.86 261.69 195 195 84 199 273 255 4 3 2 3 3 5 89213 15864 2958 15230 37037;37038;37039;37040 42998;42999;43000;43001;43002;43003 43001 6 PLVDILILPGYVQACR Unmodified 1826.0124 0.012425947 2086 Q60771 Cldn11 Claudin-11 yes yes 0 0 0 0 11 0 1 96.604 96.604 3 0.020738 31611 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.092 21.552 9.5993 0 9.6896 0 0 20.254 9 0 9 0 0 19 1 0 1 0 0 1 2373.7 15865 2086 15231 37041 43004 43004 1 PLYSNPPLNGAR Deamidation (N) 1298.6619 0.66190017 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 1 0 0 6.5 0.5 1 1 55.315 55.315 2 3.4638E-10 17827 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.77 77.974 30.044 28.672 66.986 36.449 0 108.73 28 28 65 37 0 102 1 1 1 1 0 2 9439.5 15866 1312 15232 37042;37043 43005;43006 43005 379 2 PLYSNPPLNGAR Unmodified 1297.6779 0.67788459 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 8 0 1 55.105 55.105 2 0.054508 16288 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.187 29.861 0 59.584 0 39.393 55.72 0 0 56 0 37 55 0 0 1 0 1 1 0 4508.1 15867 1312 15232 37044 43007 43007 1 PMFIVNTNVPR Unmodified 1286.6805 0.68052712 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 0 0 0 7.6 5.43 2 1 1 1 66.442 66.442 2;3 3.7886E-33 16487 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 190.24 129.26 682.64 114.02 460.15 496.79 206.38 963.1 639 121 441 471 214 909 6 3 5 6 4 7 244690 15868 1510 15233 37045;37046;37047;37048;37049 43008;43009;43010;43011;43012;43013;43014;43015 43014 8 PMGGSAPAK Unmodified 814.40072 0.40072345 178 Z4YL78;A0A0R4J0K2;K3W4R5;A2AGT5 Ckap5 Cytoskeleton-associated protein 5 yes no 0 0 0 0 6 0 1 33.97 33.97 2 0.0472 7821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.547 11.235 78.93 93.63 0 109.95 81.767 0 74 93 0 102 83 0 1 1 0 1 1 0 6712.9 15869 178 15234 37050 43016 43016 1 PMIHFGNDWEDR Unmodified 1515.6565 0.65649722 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 6 0 1 60.488 60.488 3 4.9149E-07 20348 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.187 78.905 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15870 1307 15235 37051 43017 43017 1 PMILGYWNVR Unmodified 1247.6485 0.64849871 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 13 0 1 78.319 78.319 3 0.0017628 29961 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.016 1.8262 20.387 0 0 20.767 0 29.848 19 0 0 19 0 28 1 0 0 1 0 1 10997 15871 1347 15236 37052 43018 43018 1 PNSGAIHLKPPG Unmodified 1186.6459 0.64585618 2303 Q80TL4;S4R1R0 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 1 8 0 1 46.855 46.855 3 0.010901 12419 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.132 26.79 0 58.974 36.496 0 0 0 0 56 37 0 0 0 0 1 1 0 0 0 4456.3 15872 2303 15237 37053 43019 43019 1 PPPNLFK Unmodified 811.45922 0.4592246 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 9 0 1 70.436 70.436 2 0.056791 22816 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.743 5.3983 0 0 422.3 284.17 289.24 0 0 0 402 288 289 0 0 0 1 1 1 0 68094 15873 1155 15238 37054 43020 43020 1 PPYTIVYFPVR Unmodified 1350.7336 0.73360855 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 0 0 0 11.4 1.36 2 1 2 76.79 76.79 2;3 1.3977E-16 23652 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 168.8 132.1 701.53 330.77 448.75 761.34 832.93 1005.3 657 342 428 712 824 956 5 5 3 5 5 6 208680 15874 1414 15239 37055;37056;37057;37058;37059 43021;43022;43023;43024;43025;43026;43027;43028;43029 43023 9 PQFLLQFSDVLTR Unmodified 1562.8457 0.84567819 212 A0A0R4J1T9;Q9WU79 Prodh Proline dehydrogenase 1, mitochondrial yes no 0 0 0 0 12 0 1 93.071 93.071 2 0.015264 26702 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.284 33.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15875 212 15240 37060 43030 43030 1 PQPPPPPPSAASPGATPGSATASAER Unmodified 2395.1768 0.17680175 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 5 0 2 47.177 47.177 3;4 1.166E-16 14569 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.676 64.115 20.346 36.876 66.986 36.449 0 69.29 19 37 65 37 0 65 1 2 1 1 0 1 12417 15876 1282 15241 37061;37062 43031;43032;43033 43032 3 PQSPDLCDDDVEFR Unmodified 1691.7097 0.70971458 1477 P28661;Q5ND09;Q5ND18 Sept4 Septin-4 yes no 0 0 0 0 2 0 1 58.872 58.872 3 0.00076069 20231 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.128 52.274 0 0 49.772 0 28.62 19.437 0 0 46 0 28 19 0 0 1 0 1 1 1747.1 15877 1477 15242 37063 43034 43034 1 PRPESSQEPK Unmodified 1153.5728 0.57275081 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 5 0 1 29.877 29.877 3 0.0029223 6390 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.358 51.38 59.794 0 49.471 0 37.054 47.979 56 0 46 0 37 46 1 0 1 0 1 1 2596.3 15878 1275 15243 37064 43035 43035 1 PRPPVYDDGPTGPDVEDAGDETPDVDPELLR Unmodified 3332.5321 0.53207437 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 1 2 1 1 1 68.741 68.741 3;4 1.3834E-26 23236 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.19 73.879 0 0 20.558 0 19.564 9.0357 0 0 19 0 19 9 0 0 1 0 1 1 9141.4 15879 3268 15244 37065;37066 43036;43037;43038 43036 3 PSGEAFVELESEDEVK Unmodified 1763.8101 0.81014013 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 0 3 0 1 69.702 69.702 3 0.00078761 25768 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.887 33.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15880 1209;1808 15245 37067 43039 43039 1 PSLYALSPVK Unmodified 1073.6121 0.61209643 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 10 0 1 67.982 67.982 3 0.014292 19568 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.268 25.882 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15881 894 15246 37068 43040 43040 1 PSNEELR Unmodified 843.40865 0.4086456 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept11 Septin-11 yes no 0 0 0 0 2 0 1 31.895 31.895 2 0.045061 7947 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.738 36.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15882 112 15247 37069 43041 43041 1 PSPPEVSGPADR Unmodified 1207.5833 0.5833155 2224 Q6P6I8;E0CYM8;P97797 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 0 3.5 0.5 1 1 42.341 42.341 2;3 1.4747E-11 12648 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.06 66.094 118.33 27.124 106.67 113.77 63.532 87.717 111 28 102 111 65 83 3 1 2 3 2 2 8128.8 15883 2224 15248 37070;37071 43042;43043;43044 43044 3 PSPYMFQCITEDFSVDPAR Unmodified 2258.9976 0.9976401 1670 P60487;A0A2R8W6I7 Pdxp Pyridoxal phosphate phosphatase yes no 0 0 0 0 7 0 1 88.558 88.558 3 0.0010722 32672 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.68 37.623 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15884 1670 15249 37072 43045 43045 1 PSSISWDGLDPGK Unmodified 1357.6514 0.65139506 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 6 0 1 69.34 69.34 3 0.0017272 24427 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.106 28.482 69.745 0 0 0 56.581 58.081 65 0 0 0 56 56 1 0 0 0 1 1 5375.9 15885 1806 15250 37073 43046 43046 1 PSSLPILPSGPLYPGLFDIR Unmodified 2138.1776 0.17757702 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 10.5 0.5 1 1 97.453 97.453 3 2.3672E-08 31839 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.421 60.73 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 2888.6 15886 732 15251 37074;37075 43047;43048 43047 2 PSVYIPEFIAANQTAR Unmodified 1775.9206 0.92063405 3205 Q9JHU9 Isyna1 Inositol-3-phosphate synthase 1 yes yes 0 0 0 0 9 0 1 76.9 76.9 3 0.038636 25917 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.862 7.645 49.176 36.052 0 61.208 0 78.884 46 37 0 56 0 74 1 1 0 1 0 1 4034.3 15887 3205 15252 37076 43049 43049 1 PSWGNHTPIFR Unmodified 1310.652 0.65200419 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 10 0 1 52.062 52.062 3 1.6788E-08 12430 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.71 79.199 98.756 60.454 122.44 73.585 0 118.33 93 65 120 74 0 111 1 1 1 1 0 1 37342 15888 1312 15253 37077 43050 43050 1 PTCLYGQLPK Unmodified 1175.6009 0.60087982 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 0 0 0 9 0 1 60.473 60.473 2 0.008744 18132 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.371 31.179 39.31 36.131 35.065 58.441 36.017 0 37 37 37 56 37 0 1 1 1 1 1 0 2653 15889 1414 15254 37078 43051 43051 1 PTESGSCSTAR Unmodified 1151.4877 0.48770055 2519 Q8CBE3;H3BJR7;H3BK66;Q05BF4;H3BLH1;H3BJZ0;H3BJH4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 3.5 0.5 1 1 24.042 24.042 2 0.0043067 4323 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.626 41.511 6.408 5.9519 8.397 30.104 0 29.848 6 6 9 28 0 28 1 1 1 1 0 1 4394.5 15890 2519 15255 37079;37080 43052;43053 43053 2 PTFIGTEPSLGVK Unmodified 1344.7289 0.7289171 1443 Q8CBC8;P24288;E9Q4K3;B2KFA8;F6YUH3 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 8 0 1 69.239 69.239 3 0.037271 22995 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.55 15.677 59.91 35.328 0 40.441 0 49.036 56 37 0 37 0 46 1 1 0 1 0 1 2952.3 15891 1443 15256 37081 43054 43054 1 PTGGVGAVALLIGPNAPLIFDR Unmodified 2147.2103 0.21027413 2563 Q8JZK9 Hmgcs1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 0 10 0 1 96.539 96.539 3 0.0007424 31646 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.746 31.476 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 874.66 15892 2563 15257 37082 43055 43055 1 PTTHPVCSGK Unmodified 1082.5179 0.51787847 3420 no no 0 0 0 0 8 0 1 78.256 78.256 2 0.053106 27197 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.854 19.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 15893 3420 15258 37083 43056 43056 1 PTTQQSPQDEQEK Unmodified 1514.6849 0.68488004 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 3.5 0.5 1 1 35.426 35.426 3 4.4537E-20 9934 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152 124.14 0 38.738 37.71 0 74.054 47.979 0 37 37 0 74 46 0 1 1 0 2 1 7005.5 15894 3174 15259 37084;37085 43057;43058 43057 2 PTYTNLNR Unmodified 977.49304 0.49304393 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 7 0.816 1 1 1 39.558 39.558 2 0.011846 9658 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.783 50.758 119.08 98.817 100.59 72.808 110.51 95.985 112 102 102 74 112 93 2 2 2 2 2 2 17020 15895 44;1313;1794;3223 15260 37086;37087;37088 43059;43060;43061 43060 3 PVAGGPGAPPAARPPASPSPQR Unmodified 2034.0759 0.075905916 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 7.5 0.5 2 2 41.328 41.328 3;4 8.5972E-15 9763 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.423 65.059 80.031 63.397 104.14 157.51 121.52 49.036 75 65 102 148 121 46 2 2 2 3 3 1 26563 15896 1282 15261 37089;37090;37091;37092 43062;43063;43064;43065 43064 4 PVALVTGANK Unmodified 968.56548 0.56548059 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 11.3 1.25 1 1 1 56.641 56.641 2 2.6083E-05 14513 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.07 84.088 148.49 52.873 65.357 257.13 145.71 57.414 139 56 65 250 148 56 2 1 1 3 2 1 20403 15897 1582 15262 37093;37094;37095 43066;43067;43068;43069 43066 4 PVAVALDTK Unmodified 912.52803 0.52803245 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0 Pkm Pyruvate kinase PKM yes no 0 0 0 0 9.25 2.28 1 1 1 1 58.694 58.694 2;3 0.00041148 20277 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.41 62.932 267.17 144.6 246.47 218.21 275.91 379.69 250 148 241 213 279 362 3 2 3 2 3 3 23823 15898 1609 15263 37096;37097;37098;37099 43070;43071;43072;43073 43073 4 PVCAVLLLFPITEK Unmodified 1598.9106 0.91058664 3226 Q9JKB1;A0A2I3BQ39;P58321 Uchl3;Uchl4 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase isozyme L4 yes no 0 0 0 0 6.75 5.76 2 1 1 101.44 101.44 3 9.4212E-06 33990 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.17 91.491 5.365 23.313 35.988 39.009 22.868 10.575 5 22 34 36 22 10 1 3 2 3 2 2 5673.4 15899 3226 15264 37100;37101;37102;37103 43074;43075;43076;43077;43078 43074 5 PVDTAAR Unmodified 728.3817 0.38170256 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 0 4 0 1 30.05 30.05 2 0.060955 6878 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.637 19.581 39.516 36.703 0 0 0 39.442 37 37 0 0 0 37 1 1 0 0 0 1 8290.9 15900 2377 15265 37104 43079 43079 1 PVGHCLEAAAVLSK Unmodified 1450.7602 0.76023401 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 57.999 57.999 3;4 1.9137E-07 17541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.92 88.044 48.913 211.56 131.21 140.28 203.34 104.79 46 204 139 139 204 102 1 2 2 2 2 1 14963 15901 3016 15266 37105;37106 43080;43081 43081 2 PVIFLHPK Unmodified 949.57492 0.57492306 231 A0A0U1RQ27;Q9D1I5 Mcee Methylmalonyl-CoA epimerase, mitochondrial yes no 0 0 0 0 1 0 1 59.161 59.161 3 0.0063532 19287 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.912 46.957 0 0 0 20.767 0 29.848 0 0 0 19 0 28 0 0 0 1 0 1 1616 15902 231 15267 37107 43082 43082 1 PVIILGPMK Unmodified 966.59361 0.5936096 690;767;538 Q52KF7;A2BEE9;P70175;A2BEF2;D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0;D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg3;Dlg2;Dlg1 Disks large homolog 3;Disks large homolog 2;Disks large homolog 1 no no 0 0 0 0 1 0 1 73.755 73.755 3 0.00097467 25153 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.064 69.913 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 2175.5 15903 538;690;767 15268 37108 43083 43083 1 PVILPPEVAIGALGAIK Unmodified 1657.0178 0.017828901 1614 P53395 Dbt Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 0 10 1 1 1 94.343 94.343 3 0.00023359 33668 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.812 41.675 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 1876.1 15904 1614 15269 37109;37110 43084;43085 43084 2 PVIVEPLEQLDDEDGLPEK Unmodified 2134.0681 0.06814573 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 5.4 3.83 2 2 1 82.985 82.985 3;4 6.1744E-08 31362 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.035 75.881 9.535 14.567 64.719 8.1069 14.272 9.594 9 14 61 9 14 9 1 1 3 1 1 1 10187 15905 2724 15270 37111;37112;37113;37114;37115 43086;43087;43088;43089;43090 43088 5 PVLNFYEANFPANVMDVIAR Unmodified 2279.1409 0.14087394 2135 Q8BTS0;Q61656;S4R1I6;B1ARB9;B1ARC0 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 9 0 1 99.419 99.419 3 0.0086166 35498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.09 26.605 0 0 4.9926 9.3705 8.9836 0 0 0 5 9 9 0 0 0 1 1 1 0 1637 15906 2135 15271 37116 43091 43091 1 PVLQQGR Unmodified 796.45554 0.45553621 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.5 0.5 1 1 35.693 35.693 2 0.027218 7271 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.191 51.618 188.32 0 89.208 0 147.52 212.19 176 0 83 0 148 203 2 0 1 0 2 2 22490 15907 2185 15272 37117;37118 43092;43093 43092 2 PVLVLSQNTK Unmodified 1097.6445 0.64445919 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 11 0 1 60.663 60.663 2 0.001019 15962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.688 52.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15908 1827 15273 37119 43094 43094 1 PVSPLLLASGMAR Unmodified 1310.738 0.738042 1883;1320 Q04447;P07310;A0A0J9YKD4 Ckb;Ckm Creatine kinase B-type;Creatine kinase M-type no no 0 0 0 0 11.5 0.5 1 1 75.162 75.162 2 3.358E-06 22275 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.834 50.264 0 0 55.182 0 37.201 43.71 0 0 51 0 37 42 0 0 1 0 1 1 5301.2 15909 1883;1320 15274 37120;37121 43095;43096 43095 2 PVTNQVECHPYLTQEK Unmodified 1941.9255 0.92546143 774 D3Z494;G5E895;P45377 Akr1b10;Akr1b8 Aldose reductase-related protein 2 yes no 0 0 0 0 13 0 1 65.782 65.782 4 0.053547 23956 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 30.133 1.8364 304.59 300.92 310.22 320.13 360.02 327.65 287 307 318 316 369 317 1 1 1 1 1 1 45118 15910 774 15275 37122 43097 43097 1 PVVAFQAGSFLASR Unmodified 1448.7776 0.77759863 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 1 0 1 75.477 75.477 2 0.00036087 26013 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.862 55.463 20.292 8.0547 9.1524 0 0 20.254 19 9 9 0 0 19 1 1 1 0 0 1 1018.2 15911 204 15276 37123 43098 43098 1 PVVLSGPSGAGK Unmodified 1067.5975 0.597509 925 E9Q7K1;Q564G0;Q64520;G3UYV3 Guk1 Guanylate kinase yes no 0 0 0 0 9 0 1 53.518 53.518 2 2.6241E-09 14780 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.53 83.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15912 925 15277 37124 43099 43099 1 PVVYSNTIQSLAAIVR Unmodified 1729.9727 0.97266962 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 1 0 1 84.517 84.517 2 0.029853 29766 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.556 17.764 0 0 0 9.837 0 20.254 0 0 0 9 0 19 0 0 0 1 0 1 1468.1 15913 1411 15278 37125 43100 43100 1 PVYHAITK Unmodified 927.5178 0.51780212 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 10 0 1 43.225 43.225 3 0.010617 9034 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.962 36.226 79.044 0 60.193 0 65.675 67.416 74 0 56 0 65 65 1 0 1 0 1 1 2120 15914 2216 15279 37126 43101 43101 1 PWALTFSYGR Unmodified 1196.5978 0.59784335 1309;1308 P05063;P05064;A6ZI44;Q9CPQ9;A6ZI46;A6ZI47 Aldoc;Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 0 4.67 5.19 2 1 76.399 76.399 2;3 0.0016452 26411 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.893 48.564 157.88 224.92 102.32 158.91 215.38 261.19 148 223 102 148 213 250 3 5 3 2 4 4 65442 15915 1308;1309 15280 37127;37128;37129 43102;43103;43104;43105;43106 43102 5 PWHICASDAIK Unmodified 1296.6285 0.62849155 1280 O88848 Arl6 ADP-ribosylation factor-like protein 6 yes yes 0 0 0 0 5 0 1 62.993 62.993 3 0.017109 22130 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.973 1.2078 59.513 0 96.592 83.825 60.464 107.01 56 0 93 83 65 102 1 0 1 1 1 1 6910.8 15916 1280 15281 37130 43107 43107 1 QAAAAAASTSVKPIFSR Unmodified 1674.9053 0.90531834 2949 Q9CQZ5;A0A2R8VI90 Ndufa6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes no 0 0 0 1 10.5 1.12 1 1 1 1 53.593 53.593 3 8.0529E-59 13136 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 190.15 162.74 232.53 116.18 133.76 136.1 384.97 149.01 218 121 134 135 383 144 3 2 1 2 4 1 74685 15917 2949 15282 37131;37132;37133;37134 43108;43109;43110;43111 43109 4 QAAAHTDHLR Unmodified 1118.5581 0.5581038 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4 0 1 20.335 20.335 3 9.7506E-05 2988 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.113 62.11 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1653 15918 2517 15283 37135 43112 43112 1 QAAAPVVSAR Unmodified 968.54033 0.54032847 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 5 0 1 35.844 35.844 2 0.057357 9156 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.978 17.715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15919 2790 15284 37136 43113 43113 1 QAADMILLDDNFASIVTGVEEGR Unmodified 2463.1952 0.19515393 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 7.71 3.45 1 1 2 1 2 99.563 99.563 3;4 3.7121E-98 35938 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 192.63 161.68 67.152 40.598 76.793 59.555 76.629 130.37 63 41 74 57 76 124 7 6 8 7 6 9 88681 15920 106;2253;2699 15285 37137;37138;37139;37140;37141;37142;37143 43114;43115;43116;43117;43118;43119;43120;43121;43122;43123;43124;43125;43126 43116 13 QAADMILLDDNFASIVTGVEEGR Oxidation (M) 2479.1901 0.19006855 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 1 0 5 0 1 93.307 93.307 3 4.7421E-07 34978 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.8 49.143 0 0 0 3 0 0 0 0 0 3 0 0 0 0 0 1 0 0 3002.4 15921 106;2253;2699 15285 37144 43127 43127 9 1 QAADMILLDDNFASIVTGVEEGR Oxidation (M);Deamidation (N) 2480.1741 0.17408414 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 1 0 9 4 1 1 98.464 98.464 3 1.281E-09 35695 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.86 48.369 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15922 106;2253;2699 15285 37145;37146 43128;43129 43128 41 9 2 QAAEMEELHR Unmodified 1212.5557 0.55572054 1275;3285 O88737;Q9QYX7 Bsn;Pclo Protein bassoon;Protein piccolo no no 0 0 0 0 3 0 1 37.023 37.023 3 9.4186E-06 10672 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.86 91.945 59.862 44.908 0 30.604 0 59.696 56 46 0 28 0 56 1 1 0 1 0 1 5217.9 15923 1275;3285 15286 37147 43130 43130 1 QAALEEEQAR Unmodified 1143.552 0.55201537 2280 Q7M6Y3;A0A1L1SUR7;A0A140LHQ8 Picalm Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 0 2 0.816 1 1 1 35.261 35.261 2 5.1871E-05 9094 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.83 69.099 0 29.49 18.048 50.295 0 20.254 0 28 19 47 0 19 0 2 1 2 0 1 14055 15924 2280 15287 37148;37149;37150 43131;43132;43133 43131 3 QAALSPALLSGLLPR Unmodified 1505.893 0.89296274 2607 Q8K382 Dennd1a DENN domain-containing protein 1A yes yes 0 0 0 0 11 0 1 85.485 85.485 3 0.0040349 26980 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.926 23.69 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1705.6 15925 2607 15288 37151 43134 43134 1 QAAPCVLFFDELDSIAK Unmodified 1922.9448 0.94479989 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 13 0 1 96.244 96.244 3 4.2723E-06 38605 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.767 69.901 0 98.952 0 49.44 110.9 85.313 0 93 0 46 111 83 0 1 0 1 2 2 9421.2 15926 1875 15289 37152 43135;43136 43136 2 QAAPGPQQSQPPSSR Unmodified 1534.7488 0.7488177 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 4 0 1 30.072 30.072 3 0.0009156 6923 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.872 44.706 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 2625.4 15927 1275 15290 37153 43137 43137 1 QAASSLQQASLK Unmodified 1230.6568 0.65681479 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8.75 2.49 2 1 1 48.489 48.489 2;3 7.3746E-13 13810 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.21 105.9 78.659 149.84 138.99 45.288 65.675 116.45 74 148 139 46 65 111 1 2 2 1 1 2 21362 15928 1533 15291 37154;37155;37156;37157 43138;43139;43140;43141 43139 4 QAATSPSR Unmodified 816.40898 0.40897995 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 7 3.54 1 1 1 1 19.876 19.876 2 0.0068751 2834 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.93 22.227 31.954 79.44 47.789 107.78 161.91 14.396 30 77 52 104 160 14 3 3 3 4 4 2 9418.4 15929 195 15292 37158;37159;37160;37161 43142;43143;43144;43145 43142 4 QACLDQDAVIASFDQLYDAWR Unmodified 2484.138 0.1379734 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 9 2.94 1 1 1 98.861 98.861 3 3.1496E-07 35386 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.402 50.947 0 0 9 30.256 18.484 0 0 0 9 28 19 0 0 0 1 1 1 0 11032 15930 3258 15293 37162;37163;37164 43146;43147;43148 43147 3 QADEIEK Unmodified 831.39741 0.39741221 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 0 3.5 0.5 1 1 40.167 40.167 2 0.027343 12082 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.551 19.136 403.91 256.09 427.23 390.23 329.86 289.72 380 273 427 386 342 277 2 2 2 2 2 1 38988 15931 1663 15294 37165;37166 43149;43150 43149 2 QADETLDFEEQILEAAK Unmodified 1948.9266 0.92656687 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 3 0 1 86.307 86.307 3 1.9906E-06 31418 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.51 64.431 0 0 6.2211 6.0805 5.6728 9.4321 0 0 6 6 6 9 0 0 1 1 1 1 1717.3 15932 287 15295 37167 43151 43151 1 QADSLER Unmodified 817.393 0.39299553 1198 O35551;J3QJV7 Rabep1 Rab GTPase-binding effector protein 1 yes no 0 0 0 0 3 0 1 29.544 29.544 2 0.031926 7179 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.743 19.986 0 0 48.56 27.214 26.38 48.283 0 0 46 28 28 46 0 0 1 1 1 1 2734.8 15933 1198 15296 37168 43152 43152 1 QADVNLVNAK Unmodified 1070.572 0.57202253 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 7.75 3.11 1 1 1 1 51.152 51.152 2;3 1.3087E-27 15950 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.83 100.63 39.359 0 57.434 66.444 62.62 67.503 37 0 56 65 65 65 1 0 1 1 1 1 2750 15934 2138 15297 37169;37170;37171;37172 43153;43154;43155;43156 43154 4 QADVPAAVTDAAATTPAAEDAATK Unmodified 2255.0917 0.091734718 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 0 3.33 1.11 2 1 2 1 62.206 62.206 3;4 1.5749E-22 22154 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.21 101.27 129.3 101.94 86.466 127.94 246.93 87.128 121 103 84 122 242 84 4 4 3 4 6 2 65147 15935 1318 15298 37173;37174;37175;37176;37177;37178 43157;43158;43159;43160;43161;43162;43163;43164 43159 8 QADYVPSDQDLLR Unmodified 1518.7314 0.7314363 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 3 0 1 59.543 59.543 2 0.00079532 21015 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.176 37.798 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 2914.6 15936 1772 15299 37179 43165 43165 1 QAEAFLNNQEYVLAHTEMPTTLEGAEAAIK Unmodified 3288.5973 0.59725759 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 82.905 82.905 4 0.015849 31646 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 28.181 18.298 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 3105 15937 2148 15300 37180 43166 43166 1 QAEDVSSSGPR Unmodified 1131.5156 0.51562986 2227 Q6P9Q6 Fkbp15 FK506-binding protein 15 yes yes 0 0 0 0 2 0 1 29.251 29.251 2 0.048508 6739 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.353 21.955 20.292 18.848 0 30.604 0 0 19 19 0 28 0 0 1 1 0 1 0 0 1103.5 15938 2227 15301 37181 43167 43167 1 QAEECITR Unmodified 1005.4549 0.45494386 1292 O89112;B2KGR2 Lancl1 LanC-like protein 1 yes no 0 0 0 0 2.5 0.5 1 1 32 32 2 0.020252 8019 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.098 22.986 88.692 127.02 0 39.338 162.02 163.8 83 125 0 37 162 158 1 2 0 1 2 2 17264 15939 1292 15302 37182;37183 43168;43169 43168 2 QAEEEKVPLPELVR Unmodified 1635.8832 0.88318591 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 1 7.33 4.03 1 1 1 60.852 60.852 3 0.0026999 21489 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.044 43.68 79.128 170.69 99.218 93.384 125.04 267.64 74 167 102 93 130 259 1 2 1 1 1 2 21844 15940 1641 15303 37184;37185;37186 43170;43171;43172 43170 3 QAEIENPLEDPVTGDYVHK Unmodified 2153.0277 0.027677899 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 3.5 0.5 2 2 65.456 65.456 3;4 1.2626E-08 23257 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.2 84.389 119.65 47.559 94.018 146.5 102.49 78.914 112 47 93 139 102 75 3 2 3 4 3 3 52915 15941 1151 15304 37187;37188;37189;37190 43173;43174;43175;43176;43177 43175 5 QAEIESK Unmodified 803.4025 0.40249759 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 0 0 0 0 5 0 1 38.317 38.317 2 0.051814 10333 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.064 15.628 78.297 71.364 125.16 0 111.82 124.73 74 74 120 0 111 120 1 1 1 0 1 1 5920.3 15942 3360 15305 37191 43178 43178 1 QAELDEEEKEIDAK Unmodified 1645.7683 0.76827531 1275;3285 O88737;V9GX98;Q9QYX7;S4R2E0 Bsn;Pclo Protein bassoon;Protein piccolo no no 0 0 0 1 3 0 2 53.627 53.627 3;4 9.7818E-05 18333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.378 66.709 187.19 190.44 200.85 139.91 189.24 301.61 176 194 195 139 195 288 2 3 2 2 2 3 12587 15943 1275;3285 15306 37192;37193 43179;43180;43181 43180 3 QAEMNHYALFK Unmodified 1350.6391 0.63905624 1138 Q9CYI0;J3KMQ6 5730455P16Rik Protein Njmu-R1 yes no 0 0 0 0 8 0 1 74.689 74.689 2 0.044521 25461 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.805 9.9226 0 39.368 0 61.208 0 0 0 37 0 56 0 0 0 1 0 1 0 0 7629.7 15944 1138 15307 37194 43182 43182 1 QAFAPFGPIK Unmodified 1074.5862 0.58621603 1968 Q3UEB3 Puf60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 0 10 0 1 69.566 69.566 3 0.0013247 20313 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.1 45.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15945 1968 15308 37195 43183 43183 1 QAFDDAIAELDTLNEDSYK Unmodified 2156.975 0.97497363 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 5.29 3.24 2 2 2 1 91.319 91.319 3;4 5.0312E-14 32036 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.38 103.79 60.572 91.647 75.282 96.069 9.414 86.346 57 90 76 92 9 81 4 7 5 7 1 4 38288 15946 1797 15309 37196;37197;37198;37199;37200;37201;37202 43184;43185;43186;43187;43188;43189;43190;43191 43184 8 QAFDDAIAELDTLNEDSYKDSTLIMQLLR Unmodified 3327.6181 0.61805261 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 1 13 0 1 112.12 112.12 4 2.4561E-05 44529 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.757 39.788 0 0 15 0 0 0 0 0 15 0 0 0 0 0 1 0 0 0 1296.5 15947 1797 15310 37203 43192 43192 1 QAFPNTNR Unmodified 946.46208 0.46207815 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 9.5 3.5 1 1 34.943 34.943 2 0.017182 8336 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.455 49.033 0 0 49.772 39.57 131.15 57.275 0 0 46 37 129 56 0 0 1 1 2 1 10600 15948 3094 15311 37204;37205 43193;43194 43193 2 QAFQIGSPWR Unmodified 1188.604 0.60399136 1447 P24549;O35945;A0A286YDG6;A0A286YCZ0 Aldh1a1;Aldh1a7 Retinal dehydrogenase 1;Aldehyde dehydrogenase, cytosolic 1 yes no 0 0 0 0 9 0 1 64.212 64.212 2 6.2574E-05 19852 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.21 74.791 49.358 0 0 148.12 202.24 95.793 46 0 0 139 203 93 1 0 0 2 2 1 5788.7 15949 1447 15312 37206 43195;43196 43195 2 QAGAPQATR Unmodified 898.46208 0.46207815 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 6.33 3.25 1 1 1 1 1 1 23.391 23.391 2 0.000892 3702 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.11 43.893 90.31 279.54 239.88 199.25 417.89 190.22 85 270 238 196 413 185 5 6 5 6 6 3 157920 15950 1282 15313 37207;37208;37209;37210;37211;37212 43197;43198;43199;43200;43201;43202;43203;43204 43200 8 QAGEVTFADAHRPK Unmodified 1525.7637 0.76373948 1187 Q9D8S5;O35326 Srsf5 Serine/arginine-rich splicing factor 5 yes no 0 0 0 1 13 0 1 38.55 38.55 4 0.02147 10754 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.967 21.178 0 76.461 136.07 0 133.07 84.681 0 74 130 0 130 83 0 1 1 0 1 1 3667.8 15951 1187 15314 37213 43205 43205 1 QAGEVTYADAHK Unmodified 1288.6048 0.60477922 1940 Q3TWW8 Srsf6 Serine/arginine-rich splicing factor 6 no no 0 0 0 0 4 0 1 39.009 39.009 3 0.00012377 11080 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.087 52.523 0 59.584 0 0 64.649 97.293 0 56 0 0 65 93 0 1 0 0 1 1 3602.3 15952 1940 15315 37214 43206 43206 1 QAGLSYIR Unmodified 906.49232 0.49231565 1637 P56382 Atp5e ATP synthase subunit epsilon, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 46.044 46.044 2 0.010729 14140 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.311 38.025 443.86 374.96 284.24 483.84 280.43 471.68 417 385 287 463 284 447 3 3 2 3 2 2 74569 15953 1637 15316 37215;37216;37217;37218 43207;43208;43209;43210 43210 4 QAGVIYLK Unmodified 890.52255 0.52255314 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 9 0 1 57.573 57.573 2 0.020548 16771 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.923 21.912 0 0 125.72 92.487 88.723 125.39 0 0 120 93 93 120 0 0 1 1 1 1 4464.2 15954 3164 15317 37219 43211 43211 1 QAIGWNINIPALLQEK Unmodified 1806.9992 0.99921872 2519 Q8CBE3 Wdr37 WD repeat-containing protein 37 yes yes 0 0 0 0 10 0 1 91.516 91.516 3 0.00089104 29792 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.888 35.203 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3931.5 15955 2519 15318 37220 43212 43212 1 QAITQVVISR Unmodified 1113.6506 0.6506072 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 8 0 1 52.646 52.646 2 0.0045014 15116 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.524 25.154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15956 2832 15319 37221 43213 43213 1 QALAHGLK Unmodified 836.48684 0.48683634 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 39.375 39.375 3 0.0034017 10933 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.165 25.616 1093.6 1324.7 618.18 1299.1 1957.9 824.13 1023 1324 615 1256 1952 790 2 4 2 3 3 3 186930 15957 2843 15320 37222;37223;37224 43214;43215;43216;43217 43217 4 QALGGATK Unmodified 744.413 0.41300269 1835;1767 P63040;P84086 Cplx1;Cplx2 Complexin-1;Complexin-2 no no 0 0 0 0 7.5 1.12 1 1 1 1 37.814 37.814 2 0.0066967 8202 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.69 50.412 1149.2 1046.8 1065.5 636.64 1267.6 1717.4 1081 1071 1046 644 1291 1645 3 3 2 1 3 4 153230 15958 1767;1835 15321 37225;37226;37227;37228 43218;43219;43220;43221 43220 4 QALNEIETR Deamidation (N) 1073.5353 0.53530267 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 1 0 0 2 0 1 43.046 43.046 2 0.01924 13174 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.7 40.877 49.184 0 29.249 17.938 57.752 0 46 0 28 19 56 0 1 0 1 1 1 0 3857.3 15959 1696 15322 37229 43222 43222 657 1 QALNEIETR Unmodified 1072.5513 0.55128709 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 0 0 0 7 4.32 1 1 1 44.95 44.95 2 0.00092294 14417 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.88 32.559 354.92 189.08 242.03 226.91 253.28 347.75 333 204 241 214 252 333 3 3 2 2 2 3 45346 15960 1696 15322 37230;37231;37232 43223;43224;43225 43223 3 QALPQLEPSPSPSALLALLAR Unmodified 2171.2314 0.2314035 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 0 0 0 0 9 0 1 96.199 96.199 3 0.019422 34494 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 32.797 21.852 0 9.576 0 0 0 9.594 0 9 0 0 0 9 0 1 0 0 0 1 1629.2 15961 2320 15323 37233 43226 43226 1 QALQDTLALYK Unmodified 1262.6871 0.68705229 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 13 0 2 69.84 69.84 2;3 1.2583E-08 26051 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.24 52.507 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 0 0 0 15656 15962 2148 15324 37234;37235 43227;43228 43228 2 QALQGER Unmodified 800.41407 0.41406533 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 8.5 4.5 1 1 27.322 27.322 2 0.021751 5625 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.04 38.953 281.53 132.24 0 172.69 93.636 330.99 263 139 0 158 93 313 2 1 0 1 1 2 30783 15963 1329 15325 37236;37237 43229;43230 43229 2 QALQGEREGLEETLR Unmodified 1727.8802 0.8802258 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 3 0 1 49.263 49.263 3 0.004436 16269 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.009 24.98 39.284 0 70.132 0 48.116 0 37 0 65 0 46 0 1 0 1 0 1 0 7735.6 15964 1329 15326 37238 43231 43231 1 QALQLQGDDANSLHLLALLLSAQK Unmodified 2559.4021 0.40205066 341 A0A1Y7VL44;E9Q6P5 Ttc7b yes no 0 0 0 0 9 0 1 94.636 94.636 4 4.8004E-07 33786 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.826 42.898 14.925 19.21 0 0 0 0 14 19 0 0 0 0 1 1 0 0 0 0 1137.2 15965 341 15327 37239 43232 43232 1 QALQNELEK Unmodified 1071.556 0.55603812 2208 Q6NZL0;A0A1L1SUV1 Soga3 Protein SOGA3 yes no 0 0 0 0 5 0 1 51.926 51.926 3 0.022346 16919 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.445 15.904 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15966 2208 15328 37240 43233 43233 1 QALSEIETR Unmodified 1045.5404 0.54038805 1197 O35526;D6RFB9 Stx1a Syntaxin-1A yes no 0 0 0 0 3.5 0.5 1 1 46.765 46.765 2 0.0054596 14629 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.456 32.397 93.864 41.663 58.737 36.104 44.451 112.79 88 42 56 37 46 107 2 1 1 1 1 2 20222 15967 1197 15329 37241;37242 43234;43235 43235 2 QANCPLYVTK Unmodified 1192.591 0.59104341 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 7 0 1 51.597 51.597 2 0.0046174 15300 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.662 48.513 0 0 19.269 28.942 27.29 19.475 0 0 19 28 28 19 0 0 1 1 1 1 1730.3 15968 207 15330 37243 43236 43236 1 QAPQASKPPAPK Unmodified 1218.6721 0.67207093 2028 Q4KMM3 Oxr1 Oxidation resistance protein 1 yes yes 0 0 0 1 7 0 1 38.011 38.011 3 0.016053 9016 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.013 38.8 20.292 18.848 0 30.104 26.577 38.684 19 19 0 28 28 37 1 1 0 1 1 1 4909.3 15969 2028 15331 37244 43237 43237 1 QAPYENLNDQELGEYLAR Unmodified 2121.9967 0.99671212 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 4 0 1 70.29 70.29 3 3.208E-07 25503 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.865 75.578 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 5737 15970 1882 15332 37245 43238 43238 1 QAQFALQR Unmodified 960.51411 0.51411372 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 13 0 1 43.795 43.795 2 0.041297 13300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.567 31.017 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15971 1275 15333 37246 43239 43239 1 QAQIEVVPSASALIIK Unmodified 1665.9665 0.96652161 1527 P35979 Rpl12 60S ribosomal protein L12 yes yes 0 0 0 0 7.67 0.471 1 2 76.31 76.31 3;4 0.00043783 26891 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.261 37.502 59.993 18.848 98.209 94.703 0 39.442 56 19 93 92 0 37 2 1 1 2 0 1 8319.1 15972 1527 15334 37247;37248;37249 43240;43241;43242 43240 3 QAQVPLAAVIKPLAR Unmodified 1573.9668 0.96679638 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 1 12 0 1 67.741 67.741 3 0.00013716 16928 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.371 91.292 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 3613.1 15973 366 15335 37250 43243 43243 1 QASALIDRPAPFFER Unmodified 1716.8948 0.89475365 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 8.5 2.69 1 1 1 1 61.642 61.642 3 9.7524E-05 20967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.682 77.125 117.58 217.73 353.22 119.66 289.25 357.38 111 213 344 120 288 343 2 3 4 2 3 4 36657 15974 526 15336 37251;37252;37253;37254 43244;43245;43246;43247 43244 4 QASATAPGR Unmodified 857.43553 0.43552905 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 5 0.816 1 1 1 23.477 23.477 2 0.00090847 4085 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.46 48.738 9.612 73.26 14.588 0 19.874 0 9 73 14 0 19 0 1 3 1 0 1 0 7402.8 15975 1275 15337 37255;37256;37257 43248;43249;43250 43248 3 QASEGPLK Unmodified 828.43413 0.43413207 1395;3448;3454 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;V9GXK0;S4R1W1;V9GX06 Gapdh;Gm12117;Gm3839;Gm11214 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 6.44 2.63 2 2 2 1 1 1 39.981 39.981 2;3 0.0012486 11047 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.86 66.828 4450.5 2840.7 4611 4175.5 5545.4 4579.4 4186 3012 4563 4163 5629 4436 9 8 8 10 9 8 1009900 15976 1395;3448;3454 15338 37258;37259;37260;37261;37262;37263;37264;37265;37266 43251;43252;43253;43254;43255;43256;43257;43258;43259;43260;43261;43262 43262 12 QASEQNWANYSAEQNR Unmodified 1894.8194 0.81941646 1439 P23242 Gja1 Gap junction alpha-1 protein yes yes 0 0 0 0 4 0 1 46.392 46.392 3 1.6974E-08 14555 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.121 71.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15977 1439 15339 37267 43263 43263 1 QASGGPVDIGPEYQQDLDR Unmodified 2043.9498 0.94976193 1852 P97450;E9QAD6 Atp5j ATP synthase-coupling factor 6, mitochondrial yes no 0 0 0 0 4.8 4.17 2 1 1 1 57.751 57.751 2;3 1.9816E-29 19990 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.86 90.179 20.136 67.495 18.379 57.979 55.343 28.269 19 65 19 55 56 28 1 2 1 2 1 1 33330 15978 1852 15340 37268;37269;37270;37271;37272 43264;43265;43266;43267;43268 43267 5 QASGGPVDIGPEYQQDLDRELYK Unmodified 2577.2347 0.23471056 1852 P97450;E9QAD6 Atp5j ATP synthase-coupling factor 6, mitochondrial yes no 0 0 0 1 7.33 4.03 1 1 1 67.579 67.579 3;4 2.9096E-18 24657 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.48 96.177 133.02 74.279 168.76 199.21 68.742 210.17 125 74 164 190 72 199 3 2 3 3 2 4 52997 15979 1852 15341 37273;37274;37275 43269;43270;43271;43272 43272 4 QASHAQLGDAYDQEIR Unmodified 1800.8391 0.83908927 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 5.5 4.39 1 1 1 1 42.164 42.164 3 1.5588E-58 13069 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 190.82 150.27 118.71 0 104.93 184.12 164.23 58.173 111 0 102 177 167 56 2 0 2 3 3 1 81490 15980 154 15342 37276;37277;37278;37279 43273;43274;43275;43276 43274 4 QASISGPAPTK Unmodified 1055.5611 0.56112349 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 42.542 42.542 2;3 5.2876E-08 11915 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.33 72.611 0 388.69 425.65 417.22 446.41 487.44 0 372 423 409 453 468 0 3 2 3 2 3 73991 15981 1282 15343 37280;37281;37282;37283;37284 43277;43278;43279;43280;43281 43278 5 QASLKDYEETIGK Unmodified 1480.7409 0.74093835 3122 Q9DBF1;G3UYR8;G3UY72;E9Q1H3 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 1 6 0 1 57.905 57.905 3 0.0061086 19096 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.185 36.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15982 3122 15344 37285 43282 43282 1 QASPNIVIALAGNK Unmodified 1394.7882 0.78816332 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 0 0 0 13 0 1 69.904 69.904 3 9.8456E-05 25968 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.68 47.535 0 48.014 55.657 46.12 44.687 38.167 0 46 56 46 46 37 0 1 1 1 1 1 6789 15983 1514 15345 37286 43283 43283 1 QASPNIVIALSGNK Unmodified 1410.7831 0.78307794 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 0 0 0 9 0 1 67.167 67.167 2 0.00038625 21269 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.297 60.446 20.207 0 30.194 0 37.054 47.979 19 0 28 0 37 46 1 0 1 0 1 1 3321.7 15984 2921 15346 37287 43284 43284 1 QASQAGPGPR Unmodified 967.48354 0.48354187 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 6.33 3.25 1 1 1 1 1 1 23.501 23.501 2 1.3365E-48 4089 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 209.21 193.07 531.17 473.38 697.61 375.05 581.73 668.84 501 486 684 385 593 643 5 6 4 4 5 6 111200 15985 1282 15347 37288;37289;37290;37291;37292;37293 43285;43286;43287;43288;43289;43290;43291 43286 7 QATLGAGLPISTPCTTVNK Unmodified 1928.0037 0.0037117545 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 66.839 66.839 3;4 3.4111E-08 21090 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.07 78.236 118.32 111.67 123.64 106.84 102.65 58.62 111 111 121 102 102 56 3 4 3 2 2 2 22530 15986 2622 15348 37294;37295;37296 43292;43293;43294;43295;43296 43296 5 QATVGDVNTDRPGLLDLK Unmodified 1911.0062 0.0061545955 1499 P31786;Q4VWZ5;D3Z563 Dbi Acyl-CoA-binding protein yes no 0 0 0 1 7.33 2.62 1 2 2 1 62.38 62.38 3;4 1.5365E-10 21174 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.57 83.478 275.73 434.09 692.91 623.4 863.76 756.72 259 426 685 623 878 732 3 4 6 7 7 6 171010 15987 1499 15349 37297;37298;37299;37300;37301;37302 43297;43298;43299;43300;43301;43302;43303 43298 7 QATYTTTR Unmodified 940.46141 0.46140945 2957 Q9CR62;Q5SX46;Q5SX48 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 5.5 0.5 1 1 27.83 27.83 2 0.011089 5039 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.85 51.035 64.028 27.186 36.109 48.126 23.569 44.099 60 28 37 46 23 42 2 1 1 1 1 2 5484.1 15988 2957 15350 37303;37304 43304;43305 43305 2 QAVDQISSGFFSPK Unmodified 1509.7464 0.74635808 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 9.25 2.28 1 1 1 1 70.684 70.684 2;3 1.0548E-16 23708 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.28 101.81 197.58 205.96 89.56 0 190.02 231.23 185 203 83 0 186 222 2 2 1 0 2 3 39442 15989 2555 15351 37305;37306;37307;37308 43306;43307;43308;43309 43307 4 QAVELLGK Unmodified 856.50182 0.5018177 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 7 0 1 59.114 59.114 2 0.010693 18852 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.57 53.417 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15990 775 15352 37309 43310 43310 1 QAVIGNLDEEQYK Unmodified 1505.7362 0.73618733 2630 Q8R0A7;Q3TA40 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 4 0 1 59.417 59.417 3 0.00048783 20720 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.019 44.527 0 0 68.301 45.55 34.96 48.038 0 0 65 46 37 46 0 0 1 1 1 1 3245.4 15991 2630 15353 37310 43311 43311 1 QAVLYVDSR Unmodified 1049.5506 0.55055881 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 48.806 48.806 2 0.0013993 14766 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.55 46.455 530.9 395.59 425.88 415.69 377.56 681.06 499 409 427 407 398 649 6 5 4 5 5 6 90081 15992 1223 15354 37311;37312;37313;37314;37315 43312;43313;43314;43315;43316;43317 43313 6 QAVQILQQVTVR Unmodified 1381.8041 0.80414773 491 A2ALV3;Q62420;Q8BXU5;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 10.8 1.34 1 2 1 1 1 65.569 65.569 2;3 3.8449E-32 20571 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 179.95 138.92 345.55 224.88 162.74 118.08 259.68 221.86 324 232 158 111 259 213 6 5 3 2 4 3 196110 15993 491 15355 37316;37317;37318;37319;37320;37321 43318;43319;43320;43321;43322;43323 43318 6 QAVTNPNNTFYATK Unmodified 1567.7631 0.76307078 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 52.298 52.298 3 4.5292E-05 15057 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.632 62.557 108.45 63.275 199.72 136.74 174.5 136.01 102 65 194 139 176 130 2 1 2 2 2 2 19466 15994 1533 15356 37322;37323;37324 43324;43325;43326 43324 3 QAYIQLAK Unmodified 933.52837 0.5283668 208 A0A0R4J1N9;P40630 Tfam Transcription factor A, mitochondrial yes no 0 0 0 0 9 0 1 56.67 56.67 2 0.034301 16314 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.032 19.183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15995 208 15357 37325 43327 43327 1 QAYTQFGGK Unmodified 998.48214 0.48214489 3310 Q9R1P0;E9PW69;E9Q0X0 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 8 0 1 48.132 48.132 2 0.0012175 13003 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.565 62.072 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15996 3310 15358 37326 43328 43328 1 QCDNPWNTDR Unmodified 1304.5204 0.52039767 1496 P31648 Slc6a1 Sodium- and chloride-dependent GABA transporter 1 yes yes 0 0 0 0 4 0 1 43.016 43.016 3 0.01822 12924 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.844 23.993 0 19.566 38.86 0 38.702 0 0 19 37 0 37 0 0 1 1 0 1 0 1891.8 15997 1496 15359 37327 43329 43329 1 QCQPTDTVCASVR Unmodified 1520.6712 0.671161 2605 Q8K356;Q9WUC3 Ly6h Lymphocyte antigen 6H yes no 0 0 0 0 4.5 0.5 1 1 39.832 39.832 2 3.0665E-23 11057 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.78 118.25 0 29.493 17.911 19.7 0 0 0 28 19 19 0 0 0 1 1 1 0 0 7669.6 15998 2605 15360 37328;37329 43330;43331 43331 2 QDAALDGITVAVDR Unmodified 1442.7365 0.73652168 2670 Q8R570 Snap47 Synaptosomal-associated protein 47 yes yes 0 0 0 0 4 0 1 63.565 63.565 3 0.0010422 22508 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.209 30.521 9.4447 19.256 19.355 0 19.874 0 9 19 19 0 19 0 1 1 1 0 1 0 2949.3 15999 2670 15361 37330 43332 43332 1 QDALVSLR Unmodified 900.50288 0.50288033 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 6 0 1 52.067 52.067 2 0.039231 16155 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.016 15.38 0 87.094 72.857 44.581 72.022 97.083 0 83 74 46 74 93 0 1 1 1 1 1 22575 16000 3056 15362 37331 43333 43333 1 QDDGGAPILEYIVK Unmodified 1516.7773 0.77732386 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 5.5 0.5 1 1 81.94 81.94 3 0.00062509 30363 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.65 43.092 69.397 25.876 36.577 37.21 93.61 57.025 65 28 37 37 93 56 2 1 1 1 2 2 4619.6 16001 1180 15363 37332;37333 43334;43335 43335 2 QDDGGSPIR Unmodified 943.43592 0.43592298 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 2.6 1.02 1 1 2 1 31.308 31.308 2 0.00093326 7262 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.47 77.633 202.57 128.21 160.89 223.22 310.67 39.442 190 131 159 218 306 37 3 4 3 5 5 1 142720 16002 71;74;949;1367 15364 37334;37335;37336;37337;37338 43336;43337;43338;43339;43340;43341 43336 6 QDDGTGPEK Unmodified 945.40395 0.40395415 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 3 0 1 32.508 32.508 2 0.0030602 8547 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.239 54.079 59.547 54.824 44.529 37.122 35.347 48.027 56 56 46 37 37 46 1 1 1 1 1 1 3592.8 16003 1952 15365 37339 43342 43342 1 QDDLGKGGNEESTK Unmodified 1476.6692 0.66922997 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 1 7 4.24 2 1 39.117 39.117 3;4 0.00010671 10645 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.326 57.096 226.77 142.02 179.02 236.03 38.702 0 213 148 176 223 37 0 3 2 2 2 1 0 34688 16004 1326 15366 37340;37341;37342 43343;43344;43345 43345 3 QDDPSYR Unmodified 879.37226 0.37226009 1878 Q02248 Ctnnb1 Catenin beta-1 yes yes 0 0 0 0 2 0 1 27.636 27.636 2 0.043962 6032 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.149 39.313 49.225 26.473 0 49.808 25.011 57.916 46 28 0 46 28 55 1 1 0 1 1 1 8931.9 16005 1878 15367 37343 43346 43346 1 QDDSGQEVPVR Unmodified 1228.5684 0.56839372 1946 Q3TYD6 Lmtk2 Serine/threonine-protein kinase LMTK2 yes yes 0 0 0 0 1 0 1 35.225 35.225 2 0.00095952 9157 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.228 39.534 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16006 1946 15368 37344 43347 43347 1 QDDWTFHYLR Unmodified 1379.6258 0.62584901 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 6 0 1 60.079 60.079 3 0.0026489 20169 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.435 37.584 118.21 69.233 91.666 94.506 89.29 106.18 111 74 93 93 93 102 1 1 1 1 1 1 8815 16007 2859 15369 37345 43348 43348 1 QDEGKEDPEADQEHA Unmodified 1696.6813 0.68125122 1318 P06837 Gap43 Neuromodulin yes yes 0 0 0 1 13 0 1 33.27 33.27 3 0.00014501 8165 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.981 73.107 98.818 80.055 95.325 0 237.08 101.97 93 83 93 0 230 102 1 1 1 0 1 1 25940 16008 1318 15370 37346 43349 43349 1 QDEHGFISR Unmodified 1087.5047 0.50467125 1441 P23927;A0A1L1SRG5 Cryab Alpha-crystallin B chain yes no 0 0 0 0 4 0 1 33.816 33.816 3 0.0029139 8602 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.65 44.265 79.062 0 57.18 67.637 0 0 74 0 56 65 0 0 1 0 1 1 0 0 5919.5 16009 1441 15371 37347 43350 43350 1 QDENDDDDDWNPCK Unmodified 1764.6169 0.6169364 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 2 0.816 1 1 1 51.601 51.601 3 5.695E-05 16910 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.651 64.287 9.612 68.512 0 109.59 120.21 38.386 9 65 0 102 121 38 1 3 0 2 3 2 10754 16010 1798 15372 37348;37349;37350 43351;43352;43353 43352 3 QDEQLQK Unmodified 887.43486 0.43486035 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 6.25 3.96 1 1 1 1 37.858 37.858 2;3 0.0054269 10569 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.033 33.731 226.31 458.11 579.2 297.2 465.42 551.7 214 454 574 301 470 530 2 4 4 3 3 4 62019 16011 599;600 15373 37351;37352;37353;37354 43354;43355;43356;43357 43355 4 QDEVNAAWQR Unmodified 1215.5632 0.56324876 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 45.084 45.084 2 0.00011525 14006 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.26 68.692 0 190.48 62.429 155.66 126.5 67.777 0 185 65 148 130 65 0 3 1 2 2 1 26156 16012 551 15374 37355;37356;37357 43358;43359;43360 43358 3 QDGAIENR Unmodified 901.42536 0.42535829 1096 G5E829;A0A1W2P7C7 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 7 6 1 1 26.989 26.989 2 0.012912 5377 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.181 27.382 20.292 106.01 132.54 92.1 87.715 194.71 19 103 130 93 93 185 1 3 1 1 1 2 20212 16013 1096 15375 37358;37359 43361;43362;43363 43361 3 QDGCPESQSVSLASEVFTEK Unmodified 2196.9845 0.98449245 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 72.808 72.808 3 1.8017E-05 26662 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.909 37.787 0 9.576 0 0 29.288 0 0 9 0 0 28 0 0 1 0 0 1 0 1741.8 16014 3449;3451 15376 37360 43364 43364 1 QDGSSSASDPDADYSAEVNDEK Unmodified 2285.9044 0.90438746 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 1 0 1 49.198 49.198 3 3.4107E-16 14729 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.11 84.182 12.572 25.255 29.763 25.095 24.252 21.694 12 25 30 25 25 21 1 1 1 1 1 1 6196.3 16015 3449;3451 15377 37361 43365 43365 1 QDIASGR Unmodified 745.37187 0.37186616 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 4 0 1 27.978 27.978 2 0.022427 5950 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.313 20.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16016 1250 15378 37362 43366 43366 1 QDLADVVQVCEGK Unmodified 1459.6977 0.69769333 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 4 0 1 64.61 64.61 3 0.0597 22934 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.022 7.3891 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16017 3204 15379 37363 43367 43367 1 QDLEAEHVEVEDTTLNR Unmodified 1996.9338 0.93377751 2385 Q8BGS2 Bola2 BolA-like protein 2 yes yes 0 0 0 0 1.5 0.5 1 1 51.025 51.025 3 2.1242E-08 15396 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.75 88.986 20.387 0 0 30.104 26.577 38.684 19 0 0 28 28 37 1 0 0 1 1 1 8642.1 16018 2385 15380 37364;37365 43368;43369 43368 2 QDLPALEEKPR Unmodified 1294.6881 0.68811492 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 5.5 0.5 1 1 49.862 49.862 3 0.012825 15979 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.286 39.26 157.05 91.825 216.86 164.07 236.32 239.5 148 93 213 166 241 231 2 1 2 2 2 2 47460 16019 1957 15381 37366;37367 43370;43371 43370 2 QDLPILVAK Unmodified 995.60153 0.60153174 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 9.33 2.62 1 1 1 68.299 68.299 3 0.0021541 25031 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.162 38.938 167.79 192.94 129.54 78.258 33.089 58.752 158 194 130 74 37 56 3 3 2 1 1 1 21738 16020 144 15382 37368;37369;37370 43372;43373;43374 43374 3 QDLPNAMNAAEITDK Unmodified 1629.7668 0.76683553 1693;1833 P61205;Q8BSL7;P84078 Arf3;Arf2;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1 no no 0 0 0 0 7 3.54 1 1 1 1 63.922 63.922 2;3 5.2716E-18 22794 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.71 111.39 142.29 153.9 276.33 107.18 111.66 140.76 134 158 269 107 111 134 3 4 4 2 2 2 63855 16021 1693;1833 15383 37371;37372;37373;37374 43375;43376;43377;43378 43375 4 QDLPNAMNAAEITDK Deamidation (N) 1630.7509 0.75085111 1693;1833 P61205;Q8BSL7;P84078 Arf3;Arf2;Arf1 ADP-ribosylation factor 3;ADP-ribosylation factor 2;ADP-ribosylation factor 1 no no 0 1 0 0 4 0 1 63.671 63.671 3 0.0014343 22611 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.499 44.732 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16022 1693;1833 15383 37375 43379 43379 655 1 QDSFPISLEQAVTDAAMTSK Unmodified 2138.0201 0.02014968 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 6 0 1 89.84 89.84 3 0.026985 33967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 32.146 14.008 9.612 8.9279 0 14.862 23.375 0 9 9 0 14 23 0 1 1 0 1 1 0 784.94 16023 1424 15384 37376 43380 43380 1 QDVDLCLVSSCEFK Unmodified 1698.7593 0.75930731 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 5 0 1 71.992 71.992 3 0.064516 26324 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.514 6.4606 0 29.792 0 0 48.116 0 0 28 0 0 46 0 0 1 0 0 1 0 3963.4 16024 1382 15385 37377 43381 43381 1 QDVDNASLAR Unmodified 1087.5258 0.52580062 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 2 0 1 37.102 37.102 2 0.012364 10410 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 63.073 30.261 20.244 28.427 0 0 37.714 28.772 19 28 0 0 37 28 1 1 0 0 1 1 9405.9 16025 1423 15386 37378 43382 43382 1 QDYEPVR Unmodified 905.4243 0.42429566 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 3 0 1 35.876 35.876 2 0.03501 10103 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.279 45.884 128.45 60.498 0 108.29 169.71 0 120 65 0 102 167 0 1 1 0 1 1 0 14901 16026 1042 15387 37379 43383 43383 1 QDYINLDESEAAAFDDEWRR Unmodified 2442.0724 0.07239626 2850 Q99KX1 Mlf2 Myeloid leukemia factor 2 yes yes 0 0 0 1 3 0 1 72.369 72.369 3 0.014919 26969 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 39.387 30.53 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1514.9 16027 2850 15388 37380 43384 43384 1 QEADEATLAR Unmodified 1102.5255 0.52546627 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 1.33 0.471 2 1 36.454 36.454 2;3 3.6569E-12 10197 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 169.77 109.09 1491.5 1403.8 1536.6 1351 1638.8 2128.9 1405 1438 1557 1348 1695 2041 3 4 3 5 4 4 320550 16028 1304 15389 37381;37382;37383 43385;43386;43387;43388;43389 43388 5 QEADEGLK Unmodified 888.41888 0.41887593 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 3 0 2 39.952 39.952 2;3 0.017441 12105 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.986 7.6604 89.084 63.95 121.96 80.715 105.91 188.86 84 65 120 79 111 180 2 1 2 1 2 2 68304 16029 2790 15390 37384;37385 43390;43391 43390 2 QEAEQLK Unmodified 844.42905 0.42904669 1750 P62874;H3BKR2;H3BLF7;Q61011 Gnb1;Gnb3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 yes no 0 0 0 0 6.67 4.5 1 1 1 39.31 39.31 2;3 0.027413 11288 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.302 7.0512 346.47 796.24 617.07 977.56 1567.2 1126.8 327 780 599 955 1577 1099 1 3 2 3 2 2 134170 16030 1750 15391 37386;37387;37388 43392;43393;43394 43393 3 QEAEQLR Unmodified 872.43519 0.4351947 1751;1485 P29387;P62880;E9QKR0;D3Z1M1;D3Z1T4;A0A0A6YVN9;V9GWY1 Gnb4;Gnb2 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 0 0 0 0 4.75 4.82 1 1 1 1 30.48 30.48 2 9.3919E-10 7282 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 174.69 61.182 951.79 726.89 1000.9 674.29 1171 803.08 896 753 994 676 1173 777 5 4 4 4 4 3 391330 16031 1485;1751 15392 37389;37390;37391;37392 43395;43396;43397;43398;43399 43396 5 QEAFLLNEDLGDSLDSVEALLK Unmodified 2418.2166 0.21660088 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.2 2.99 2 1 1 1 105.01 105.01 3;4 3.4768E-16 42742 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.957 81.809 28.663 62.513 32.697 21.926 31.931 52.568 27 61 33 22 32 50 3 5 4 3 3 5 20767 16032 551 15393 37393;37394;37395;37396;37397 43400;43401;43402;43403;43404;43405 43405 6 QEAIDVLLLGNTLNSDLADK Deamidation (N) 2142.1056 0.10559387 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 1 0 0 7 0 1 93.003 93.003 4 0.00044719 34445 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.539 28.528 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 1034 16033 927 15394 37398 43406 43406 251 1 QEAIDVLLLGNTLNSDLADK Unmodified 2141.1216 0.12157828 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10 3 1 1 92.912 92.912 3 1.1881E-10 37022 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.729 65.675 39.618 16.481 0 40.441 0 49.036 37 18 0 37 0 46 1 1 0 1 0 1 5144.4 16034 927 15394 37399;37400 43407;43408 43408 2 QEAIDWLLGLAVR Unmodified 1482.8195 0.81946344 2924 Q9CQE8 UPF0568 protein C14orf166 homolog yes yes 0 0 0 0 10.5 0.5 1 1 99.705 99.705 2;3 0.0070348 32550 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.185 24.652 9 0 24.886 0 14.644 0 9 0 23 0 14 0 1 0 1 0 1 0 4744.4 16035 2924 15395 37401;37402 43409;43410 43409 2 QEALLAAISEK Unmodified 1171.6449 0.64485312 2249;1027 Q6PH08;Q3UHT7;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1;V9GX53;V9GXL1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 8 0 1 71.482 71.482 2 0.0062499 24016 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.121 21.3 0 0 0 30.604 0 49.036 0 0 0 28 0 46 0 0 0 1 0 1 2006 16036 2249;1027 15396 37403 43411 43411 1 QEASEKEDR Unmodified 1090.4891 0.48908076 825 E9PV22;Q505F5 Lrrc47 Leucine-rich repeat-containing protein 47 yes no 0 0 0 1 3 0 1 25.31 25.31 3 0.02318 5237 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.592 26.584 20.292 18.848 0 34.455 27.705 0 19 19 0 32 28 0 1 1 0 1 1 0 1303.3 16037 825 15397 37404 43412 43412 1 QEATLVVGGDGR Unmodified 1200.6099 0.6098646 3022 Q9D0F9 Pgm1 Phosphoglucomutase-1 yes yes 0 0 0 0 4.5 0.5 1 1 45.935 45.935 2 2.0306E-11 14316 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.95 88.639 29.633 0 69.065 25.054 76.253 0 28 0 65 28 74 0 1 0 1 1 1 0 5879 16038 3022 15398 37405;37406 43413;43414 43413 2 QEAVALLQGQR Unmodified 1211.6622 0.66223452 2166 Q64010;Q5ND50;Q3TQV3 Crk Adapter molecule crk no no 0 0 0 0 7.5 0.5 1 1 54.805 54.805 2 0.00366 16069 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.92 37.862 49.102 16.419 29.063 0 58.576 0 46 19 28 0 56 0 1 1 1 0 1 0 4253.1 16039 2166 15399 37407;37408 43415;43416 43416 2 QEDAPMIEPLVPEETK Unmodified 1824.8815 0.88153093 3345;369 A0A286YDY4;A0A286YCT6;Q9WV92;A0A286YD84 Epb41l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 4 0 1 69.978 69.978 3 0.00071033 25344 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.784 34.42 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 3152.2 16040 369;3345 15400 37409 43417 43417 1 QEEAEYVR Unmodified 1022.4669 0.46688876 2166 Q64010;Q5ND50;F7D232 Crk Adapter molecule crk no no 0 0 0 0 5.33 5.44 1 1 1 35.252 35.252 2;3 0.0091044 9676 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 101.11 58.079 59.352 72.669 171.16 85.198 101.98 86.634 56 74 166 83 102 84 1 2 3 2 2 2 13007 16041 2166 15401 37410;37411;37412 43418;43419;43420 43419 3 QEEELQAKDEELLK Unmodified 1700.8469 0.84685999 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 3 0 1 59.052 59.052 3 0.0039965 20824 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.079 30.43 39.117 35.594 67.997 0 0 59.696 37 37 65 0 0 56 1 1 1 0 0 1 4657.6 16042 1974 15402 37413 43421 43421 1 QEEQAEAALYK Unmodified 1278.6092 0.6091959 1314 P05532 Kit Mast/stem cell growth factor receptor Kit yes yes 0 0 0 0 4 0 1 51.198 51.198 3 0.0058592 16852 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.967 37.713 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16043 1314 15403 37414 43422 43422 1 QEEQGAQVQR Unmodified 1171.5582 0.55816338 395 A0A2R8VHU8;E9Q7U2;Q8CGU1 Calcoco1 Calcium-binding and coiled-coil domain-containing protein 1 yes no 0 0 0 0 1 0 1 24.951 24.951 2 0.0052068 4505 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.056 42.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16044 395 15404 37415 43423 43423 1 QEFAQHANAFHQWIQETR Unmodified 2240.0511 0.051147728 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 0.816 1 1 1 57.218 57.218 4 8.6275E-08 17099 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.98 85.623 285.51 116.7 246.44 144.34 240.36 288.42 268 121 241 148 241 277 4 2 3 3 3 4 36672 16045 551 15405 37416;37417;37418 43424;43425;43426;43427 43427 4 QEFAQHANAFHQWIQETR Deamidation (N) 2241.0352 0.035163313 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 13 0 1 55.698 55.698 4 2.0518E-05 19095 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.361 52.832 221.08 204.28 0 267.09 211.03 259.41 207 206 0 248 222 249 1 1 0 1 1 1 16547 16046 551 15405 37419 43428 43428 154 1 QEGAETLELSADGR Unmodified 1474.69 0.68996541 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 0 2 0 1 50.489 50.489 3 0.00030369 16368 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.257 43.913 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2020.9 16047 1944 15406 37420 43429 43429 1 QEGAETLELSADGRPVTTHTR Unmodified 2267.1142 0.1142015 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 1 3.5 0.5 1 1 43.584 43.584 4 8.0063E-11 13607 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.539 61.945 60.088 0 0 69.87 108.46 67.508 56 0 0 65 111 65 1 0 0 1 2 1 17778 16048 1944 15407 37421;37422 43430;43431 43430 2 QEGVFAK Unmodified 777.4021 0.40210366 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 1 47.861 47.861 2 0.060447 14313 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.919 32.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16049 1412 15408 37423 43432 43432 1 QEIADIEEGR Unmodified 1158.5517 0.55168102 2749 Q91W43 Gldc Glycine dehydrogenase (decarboxylating), mitochondrial yes yes 0 0 0 0 1 0 1 49.267 49.267 2 9.3199E-05 14736 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.82 48.566 21.239 21.663 18.725 33.86 0 29.848 20 22 20 32 0 28 1 1 1 1 0 1 4258.1 16050 2749 15409 37424 43433 43433 1 QEIAQEFK Unmodified 991.49746 0.4974606 1577 P48036;A0A0G2JGQ0 Anxa5 Annexin A5 yes no 0 0 0 0 6 0 1 53.675 53.675 3 0.034422 17093 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.276 18.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16051 1577 15410 37425 43434 43434 1 QEISSLKDELQTALR Unmodified 1729.921 0.92102798 2067 Q5SWZ5;F6XZM9;F6S5I0;F6RND9;P97434 Mprip Myosin phosphatase Rho-interacting protein yes no 0 0 0 1 8 0 1 38.343 38.343 4 0.050085 8420 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.35 4.8135 60.088 0 0 0 65.345 77.019 56 0 0 0 65 74 1 0 0 0 1 1 10012 16052 2067 15411 37426 43435 43435 1 QELEDLER Unmodified 1030.4931 0.49310351 3257 Q9QUN9 Dkk3 Dickkopf-related protein 3 yes yes 0 0 0 0 1.5 0.5 1 1 49.329 49.329 2 0.006209 14743 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.88 30.068 29.882 80.977 0 74.744 35.807 77.862 28 78 0 69 37 74 1 2 0 2 1 2 11361 16053 3257 15412 37427;37428 43436;43437 43436 2 QELEDLTADIK Unmodified 1273.6402 0.64016167 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 4 0 1 71.142 71.142 3 0.040382 25769 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.73 17.197 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 2361.7 16054 1696 15413 37429 43438 43438 1 QELGDSLDDEIAV Unmodified 1402.6464 0.64636926 3057 Q9D3A8 Nos1ap Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein yes yes 0 0 0 0 2 0 1 76.775 76.775 2 0.0074675 27526 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.676 38.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 892.28 16055 3057 15414 37430 43439 43439 1 QELSHALYQHDAACR Unmodified 1797.8217 0.82166506 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 0 0 0 5 0 1 39.639 39.639 4 0.017503 10978 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.143 27.167 29.807 0 39.884 0 67.99 0 28 0 37 0 65 0 1 0 1 0 1 0 1888.6 16056 2847 15415 37431 43440 43440 1 QELTSESER Unmodified 1077.4938 0.49383179 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 2 0.816 1 1 1 32.204 32.204 2 2.9827E-25 7730 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 191.25 87.415 181.63 113.14 215.07 172.62 77.965 245.09 171 116 213 171 84 232 3 2 3 3 2 3 30363 16057 2792 15416 37432;37433;37434 43441;43442;43443 43441 3 QEMQEVQSSR Unmodified 1220.5455 0.54554978 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 33.856 33.856 2 2.0315E-05 9129 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.93 93.743 129.1 0 123.16 38.174 80.186 101.11 121 0 116 37 79 97 2 0 2 1 1 2 28666 16058 1271 15417 37435;37436;37437;37438 43444;43445;43446;43447 43445 4 QENVETEK Unmodified 975.4509 0.45090434 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 2.5 0.5 1 1 35.48 35.48 2 0.0068057 9935 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.21 31.993 9.4375 58.45 29.742 0 75.794 46.873 9 56 28 0 74 46 1 2 1 0 1 1 3792.3 16059 1481 15418 37439;37440 43448;43449 43449 2 QEPASKPDVNR Unmodified 1239.6208 0.62076364 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 1 5 0 1 33.526 33.526 3 0.012955 7953 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.205 12.661 88.352 62.096 66.159 0 0 88.478 83 65 65 0 0 83 1 1 1 0 0 1 12546 16060 817 15419 37441 43450 43450 1 QEPEPGPNVEPSFTPPAVPPR Unmodified 2241.1066 0.10659692 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 3 0 1 63.234 63.234 3 0.0067479 22719 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 33.074 24.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16061 510 15420 37442 43451 43451 1 QEPERNECFLQHK Unmodified 1713.7893 0.7893023 1321;655 P07724;CON__P02768-1 Alb Serum albumin no no 0 0 0 1 4 0 1 39.884 39.884 4 0.018359 11443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.761 23.098 109.45 0 0 0 0 88.478 102 0 0 0 0 83 1 0 0 0 0 1 5540.9 + 16062 1321;655 15421 37443 43452 43452 1 QEPETAPSPP Unmodified 1051.4822 0.48220447 1014 F7ARZ1;Q3TI14;Q8VE22 Mrps23 28S ribosomal protein S23, mitochondrial yes no 0 0 0 0 1 0 1 44.451 44.451 2 0.060525 12845 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.066 48.06 9.657 0 0 20.767 0 0 9 0 0 19 0 0 1 0 0 1 0 0 2498.3 16063 1014 15422 37444 43453 43453 1 QEPGSNQEIK Unmodified 1128.5411 0.54111633 1251 O70325;S4R1E5 Gpx4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial;Glutathione peroxidase yes no 0 0 0 0 3.5 0.5 1 1 37.939 37.939 2 0.0056639 10594 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.841 32.242 20.387 0 0 39.234 28.359 0 19 0 0 38 28 0 1 0 0 2 1 0 2821.4 16064 1251 15423 37445;37446 43454;43455 43455 2 QEPLGSDSEGVNCLAYDEAIMAQQDR Unmodified 2895.2651 0.26510077 2293 Q7TQI3 Otub1 Ubiquitin thioesterase OTUB1 yes yes 0 0 0 0 2.67 0.471 1 2 73.156 73.156 3;4 2.3093E-20 27347 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.365 77.642 0 5.32 9.3245 9.2813 17.637 34.675 0 5 9 9 18 33 0 1 1 1 2 2 8557.2 16065 2293 15424 37447;37448;37449 43456;43457;43458 43458 3 QEPVRTDDGR Unmodified 1171.5582 0.55816338 1733 P62746 Rhob Rho-related GTP-binding protein RhoB yes yes 0 0 0 1 1.5 0.5 1 1 24.095 24.095 3 0.050223 4537 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.998 22.88 0 0 30.296 0 37.714 49.026 0 0 28 0 37 47 0 0 1 0 1 2 5330.4 16066 1733 15425 37450;37451 43459;43460 43460 2 QEPYTLPQGFTWDALDLGDR Unmodified 2321.0964 0.096426166 1249 O70310 Nmt1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 0 13 0 1 89.008 89.008 3 9.3685E-05 35215 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.585 30.932 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16067 1249 15426 37452 43461 43461 1 QEQAAAPGPAATK Unmodified 1238.6255 0.62551466 3227 Q9JKC6 Cend1 Cell cycle exit and neuronal differentiation protein 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 37.449 37.449 2 9.0334E-07 10439 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.38 53.65 0 29.507 17.031 69.505 27.906 19 0 28 19 65 28 19 0 1 1 2 1 1 9062.9 16068 3227 15427 37453;37454;37455 43462;43463;43464 43462 3 QEQAAVEDSGPGEINEDDPDVPAVVPLSEYDAVER Unmodified 3738.7021 0.70205283 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 1 0 1 77.445 77.445 4 0.00010885 26964 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 35.22 31.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1960.5 16069 3322 15428 37456 43465 43465 1 QEQDTYALSSYTR Unmodified 1560.7056 0.70561548 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 7 4.32 1 1 1 50.628 50.628 2;3 4.5326E-12 16973 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.33 82.348 80.297 0 58.461 38.738 0 78.884 75 0 56 37 0 74 1 0 2 1 0 2 4065.9 16070 2622 15429 37457;37458;37459 43466;43467;43468;43469 43466 4 QEQEEEGR Unmodified 1003.4207 0.42066685 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 13 0 1 19.574 19.574 2 0.0024655 2909 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128 72.093 0 0 6.492 0 13.355 7.0809 0 0 6 0 13 7 0 0 1 0 1 1 929.77 16071 852 15430 37460 43470 43470 1 QEQEEEGRK Unmodified 1131.5156 0.51562986 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 1 0 1 25.008 25.008 3 0.061446 4527 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.894 26.522 48.978 75.433 0 61.208 0 0 46 74 0 56 0 0 1 1 0 1 0 0 3148.9 16072 852 15431 37461 43471 43471 1 QEQQPTPGAR Unmodified 1110.5418 0.54178503 967 Q6NXK7;E9QN98 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 2.5 0.5 1 1 25.333 25.333 2 0.0060348 5074 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.841 49.066 0 9.576 9.1124 23.88 38.057 0 0 9 9 23 37 0 0 1 1 2 1 0 3242.2 16073 967 15432 37462;37463 43472;43473 43472 2 QEQYYSEK Unmodified 1073.4666 0.46655441 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 4 0 1 40.629 40.629 3 0.018732 11812 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.064 19.619 0 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 3721.9 16074 3373 15433 37464 43474 43474 1 QESMPFAVVGSDKEYQVNGK Deamidation (N) 2213.031 0.031048717 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 1 0 1 7 0 1 66.203 66.203 4 0.00234 22135 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.356 25.731 0 39.368 0 39.233 64.201 57.864 0 37 0 37 65 56 0 1 0 1 1 1 2812.4 16075 402;3384 15434 37465 43475 43475 106 1 QESNEYR Unmodified 924.39372 0.39372381 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 1 0 1 23.13 23.13 2 0.0051139 3846 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 146.27 77.032 0 97.847 66.129 59.684 103.95 0 0 93 69 60 102 0 0 1 1 1 1 0 19898 16076 1423 15435 37466 43476 43476 1 QESNEYRR Unmodified 1080.4948 0.49483484 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 1 2 0 1 19.269 19.269 3 0.0058708 2985 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.098 53.053 0 26.228 22.23 0 18.281 46.382 0 25 22 0 19 44 0 1 1 0 1 1 2434.5 16077 1423 15436 37467 43477 43477 1 QETEISK Unmodified 833.41306 0.41306227 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 38.921 38.921 2 0.030759 11026 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.676 39.66 158.61 54.373 166.85 219.69 169.06 0 149 56 167 213 167 0 2 1 2 2 1 0 21735 16078 2960 15437 37468;37469 43478;43479 43479 2 QETFDAGLQAFQQEGIANITALK Unmodified 2492.2547 0.25471772 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7 0.707 1 2 1 90.721 90.721 3;4 1.6101E-10 32891 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.619 54.365 0 0 42.723 9.5399 14.329 29.439 0 0 42 9 14 28 0 0 3 1 1 2 16911 16079 551 15438 37470;37471;37472;37473 43480;43481;43482;43483 43483 4 QETFDAGLQAFQQEGIANITALKDQLLAAK Unmodified 3231.6776 0.67755682 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 10.6 1.36 1 2 1 1 104.09 104.09 4;5 1.8634E-37 33403 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.03 115.04 64.57 34.302 38.288 44.057 7.8123 76.752 61 36 37 42 8 72 4 3 3 3 1 4 22579 16080 551 15439 37474;37475;37476;37477;37478 43484;43485;43486;43487;43488;43489;43490 43486 7 QETGITEGQGPVGEEEEK Unmodified 1915.8647 0.8646949 873 E9Q0G1;Q9CQJ6 Denr Density-regulated protein yes no 0 0 0 0 2 0.816 1 1 1 48.741 48.741 3 2.9105E-07 15547 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.436 55.307 0 19.892 59.751 16.387 75.071 57.554 0 19 57 18 74 56 0 1 3 2 2 2 12440 16081 873 15440 37479;37480;37481 43491;43492;43493 43492 3 QETLDGHMVVR Unmodified 1283.6292 0.62921983 74 A0A0A6YY91 Ncam1 yes yes 0 0 0 0 4 0 1 42.166 42.166 3 0.00040452 12533 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.505 55.457 60.088 0 0 0 0 49.036 56 0 0 0 0 46 1 0 0 0 0 1 3168.1 16082 74 15441 37482 43494 43494 1 QETQSAEPPPPEPPRI Unmodified 1771.8741 0.87407779 501 I7HJQ8;A2AP74;Q8BIF0 Cd99l2 CD99 antigen-like protein 2 yes no 0 0 0 1 2 0 1 50.733 50.733 3 0.0090287 16561 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 44.734 28.481 9.612 8.9279 0 0 0 0 9 9 0 0 0 0 1 1 0 0 0 0 4621.1 16083 501 15442 37483 43495 43495 1 QETTDADETQAYYK Unmodified 1661.7057 0.70567506 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 3 0 1 47.536 47.536 3 2.2794E-05 15503 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.52 83.924 69.225 63.937 33.21 59.229 0 59.696 65 65 37 56 0 56 1 1 1 1 0 1 6493.4 16084 2045 15443 37484 43496 43496 1 QETVDCLK Unmodified 991.46445 0.46444592 1355;103 P11798;F8WIS9;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2a;Camk2d Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 0 0 8.5 4.5 1 1 46.733 46.733 2 0.007461 14581 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.4 48.115 510.1 554 0 691.09 622.31 715.65 478 553 0 643 639 688 2 2 0 2 1 1 88417 16085 1355;103 15444 37485;37486 43497;43498 43498 2 QETVDCLKK Unmodified 1119.5594 0.55940893 1355;103 P11798;F8WIS9;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0 Camk2a;Camk2d Calcium/calmodulin-dependent protein kinase type II subunit alpha;Calcium/calmodulin-dependent protein kinase type II subunit delta no no 0 0 0 1 13 0 1 44.508 44.508 3 0.0086371 13643 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.776 47.35 1020.1 369.03 1191.7 810.38 731.58 1248.7 959 381 1160 819 776 1191 2 1 2 2 2 2 44264 16086 1355;103 15445 37487 43499;43500 43499 2 QETVECLK Unmodified 1005.4801 0.48009598 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 9 4.06 1 1 2 47.112 47.112 2;3 1.5195E-07 14169 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.44 57.312 217.02 277.12 241.42 255.01 204.7 66.139 204 278 250 250 204 65 2 3 3 3 2 1 31035 16087 1475 15446 37488;37489;37490;37491 43501;43502;43503;43504 43502 4 QEVEAPHR Unmodified 964.47264 0.47264284 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 2.5 0.5 1 1 25.73 25.73 3 0.0021753 5210 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.85 59.339 9.5583 39.464 19.365 0 38.702 0 9 38 19 0 37 0 1 2 1 0 1 0 4452.5 16088 490 15447 37492;37493 43505;43506 43505 2 QEVGSHGR Unmodified 868.41513 0.41512796 1460 Q8C483;P26638;A2AFS0 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 2.5 0.5 1 1 15.78 15.78 3 0.0010488 2568 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.74 80.189 2.146 4.256 0 0 4.0415 7.3467 2 4 0 0 4 7 1 1 0 0 1 2 765.2 16089 1460 15448 37494;37495 43507;43508 43507 2 QEVLQETFIR Unmodified 1261.6667 0.6666512 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 5.5 0.5 1 1 62.141 62.141 2 0.0041093 21070 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.34 38.087 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16090 570 15449 37496;37497 43509;43510 43510 2 QEWESAGQQAPHPR Unmodified 1619.7441 0.74406667 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 4 0 1 38.207 38.207 3 4.4503E-05 10708 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.068 59.849 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 2720.2 16091 2154 15450 37498 43511 43511 1 QEYALAMIQCK Unmodified 1353.6421 0.64209271 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 7.5 0.5 1 1 67.415 67.415 3 0.00057113 22040 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.819 60.28 99.426 72.032 0 0 58.576 49.036 93 74 0 0 56 46 2 2 0 0 1 1 7760.1 16092 65 15451 37499;37500 43512;43513 43513 2 QEYDEAGPSIVHR Unmodified 1499.7005 0.70047052 1791 P68033;P68134;P62737 Actc1;Acta1;Acta2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle yes no 0 0 0 0 2 0 1 41.813 41.813 3 8.0715E-13 12677 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 102.5 79.927 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16093 1791 15452 37501 43514 43514 1 QEYDESGPSIVHR Unmodified 1515.6954 0.69538514 1673;1781 P60710;E9Q1F2;F8WGM8;P63260;B1ATY1 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 2.9 1.14 1 3 3 2 1 40.009 40.009 2;3;4 1.9733E-122 12114 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 250.53 236.44 444.11 489.52 538.11 428.88 627.37 611.91 418 487 533 422 635 589 9 10 10 9 11 11 1878600 16094 1673;1781 15453 37502;37503;37504;37505;37506;37507;37508;37509;37510;37511 43515;43516;43517;43518;43519;43520;43521;43522;43523;43524;43525;43526;43527;43528;43529;43530 43525 16 QEYEEGGK Unmodified 938.39814 0.39814049 2874 Q99MR0;Q9Z2N8 Actl6b;Actl6a Actin-like protein 6B;Actin-like protein 6A yes no 0 0 0 0 3 0 1 35.778 35.778 2 0.029305 10084 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.846 27.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16095 2874 15454 37512 43531 43531 1 QEYEQLIAK Unmodified 1120.5764 0.57643921 661 CON__P35527 yes yes 0 0 0 0 5 0 1 59.589 59.589 2 0.0088464 20583 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.85 28.427 39.474 0 38.135 38.168 0 29.848 37 0 37 37 0 28 1 0 1 1 0 1 1960.3 + 16096 661 15455 37513 43532 43532 1 QFAALDPEQR Unmodified 1173.5778 0.57783619 2303 Q80TL4;S4R1R0;F6SBE4 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 5 0 1 54.198 54.198 2 0.0029051 17939 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.883 55.156 39.248 35.957 45.737 37.715 0 0 37 37 46 37 0 0 1 1 1 1 0 0 3787.5 16097 2303 15456 37514 43533 43533 1 QFAALVASK Unmodified 933.52837 0.5283668 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 10.5 0.5 1 1 62.719 62.719 2 0.00083165 17309 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.5 45.762 85.377 42.626 87.701 91.239 130.79 90.076 80 43 89 88 132 88 2 1 2 2 2 2 10647 16098 1943 15457 37515;37516 43534;43535;43536 43534 3 QFAEENGLLFLEASAK Deamidation (N) 1766.8727 0.87268081 2729 Q91V41;Q50HX3;A0A2R8VHW9 Rab14 Ras-related protein Rab-14 yes no 0 1 0 0 9 4 1 1 85.417 85.417 3 3.2132E-05 33405 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.786 60.091 39.602 19.571 0 0 37.054 47.979 37 19 0 0 37 46 2 1 0 0 1 1 7577.8 16099 2729 15458 37517;37518 43537;43538;43539 43538 979 3 QFAEENGLLFLEASAK Unmodified 1765.8887 0.88866522 2729 Q91V41;Q50HX3;A0A2R8VHW9 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 6 0 1 83.146 83.146 3 0.0019766 30928 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.883 29.045 0 0 38 0 0 0 0 0 38 0 0 0 0 0 1 0 0 0 2557.4 16100 2729 15458 37519 43540 43540 1 QFAPIHAEAPEFIEMSVEQEILVTGIK Unmodified 3025.5471 0.54705992 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 94.374 94.374 4 5.4279E-12 37680 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.613 53.684 39.464 20.216 58.835 41.534 0 0 37 19 56 38 0 0 1 1 2 1 0 0 7778.9 16101 1642 15459 37520;37521 43541;43542;43543;43544 43543 4 QFFPFGDPTK Unmodified 1182.571 0.5709599 2439 Q8BNY6 Ncs1 Neuronal calcium sensor 1 yes yes 0 0 0 0 9 0 1 75.115 75.115 3 0.020284 24979 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.796 18.783 0 0 0 49.042 65.737 0 0 0 0 46 65 0 0 0 0 1 1 0 4310.4 16102 2439 15460 37522 43545 43545 1 QFFQVPLNIPK Unmodified 1329.7445 0.74450759 3148 Q9DCM2;A0A0N4SVE5 Gstk1 Glutathione S-transferase kappa 1 yes no 0 0 0 0 11 0 1 80.827 80.827 3 0.012158 25007 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.5 22.386 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16103 3148 15461 37523 43546 43546 1 QFGIVTIGEEK Unmodified 1219.6449 0.64485312 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 0 9.4 3.01 1 1 1 2 67.767 67.767 3 1.5299E-08 24661 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 115.29 67.196 305.24 504.02 442.71 510.34 577.68 334.97 287 500 445 501 583 324 3 6 4 6 5 3 209060 16104 1526 15462 37524;37525;37526;37527;37528 43547;43548;43549;43550;43551;43552 43551 6 QFGIVTIGEEKK Unmodified 1347.7398 0.73981614 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 1 9.25 2.28 1 1 1 1 61.241 61.241 3 6.6197E-05 19291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.063 50.662 661.22 540.49 707.53 801.92 565.77 715.13 622 561 703 782 584 686 3 4 3 4 3 4 59108 16105 1526 15463 37529;37530;37531;37532 43553;43554;43555;43556 43554 4 QFGTFPGNYVKPLYL Unmodified 1742.9032 0.90319307 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417;A0A286YD34 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 1 11 0 1 84.725 84.725 3 0.0029339 26562 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.648 32.09 29.865 0 30.145 0 0 0 28 0 28 0 0 0 1 0 1 0 0 0 3803.3 16106 353 15464 37533 43557 43557 1 QFHIIVCGLDSIIAR Unmodified 1740.9345 0.93450998 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 11 0 1 79.618 79.618 3 0.040137 24312 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 33.624 16.135 30.044 0 0 29.725 46.751 0 28 0 0 28 46 0 1 0 0 1 1 0 2326.9 16107 1929 15465 37534 43558 43558 1 QFIAAQGSSR Unmodified 1063.5411 0.54105675 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 8 0 1 40.801 40.801 2 0.013241 9577 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.679 23.441 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16108 2536 15466 37535 43559 43559 1 QFILVMNALDNR Unmodified 1432.7497 0.74966932 3375 Q9Z1F9;A2BH29;H3BLM2 Uba2 SUMO-activating enzyme subunit 2 yes no 0 0 0 0 11 0 1 81.416 81.416 3 0.052636 25250 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.763 9.0905 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 3976.1 16109 3375 15467 37536 43560 43560 1 QFLDYFK Unmodified 959.47527 0.4752686 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 10.8 1.48 1 1 1 1 75.43 75.43 2;3 0.0095472 25128 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.899 46.329 398.19 272.05 173.52 219.22 392.07 442.93 373 278 176 213 399 426 3 3 2 2 3 3 52064 16110 1876 15468 37537;37538;37539;37540 43561;43562;43563;43564 43561 4 QFLFRPWDVTK Unmodified 1435.7612 0.76122028 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 1 11 0 1 72.635 72.635 3 0.0041802 21213 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.924 24.413 128.76 0 125.8 192.42 179.93 0 120 0 120 186 176 0 1 0 1 2 1 0 61806 16111 1876 15469 37541 43565;43566 43565 2 QFLLAAEAIDDIPFGITSNSGVFSK Unmodified 2639.3483 0.34828376 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 8 0 1 103.94 103.94 4 0.040786 36357 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 26.273 11.504 14.963 11.759 0 0 0 0 14 12 0 0 0 0 1 1 0 0 0 0 650.91 16112 1331 15470 37542 43567 43567 1 QFLLSTMDQK Oxidation (M) 1225.6013 0.60127375 3415 yes yes 0 0 1 0 6 0 1 73.007 73.007 3 0.051865 26192 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.606 6.8967 39.469 0 39.037 17.918 27.797 19.461 37 0 37 19 28 19 1 0 1 1 1 1 2556.1 + 16113 3415 15471 37543 43568 43568 203 1 QFLPFLQR Unmodified 1047.5866 0.58655038 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 11 0 1 74.478 74.478 2 0.024843 22064 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.38 39.184 73.74 58.868 0 73.651 93.895 0 69 60 0 69 93 0 1 1 0 1 1 0 12295 16114 2276 15472 37544 43569 43569 1 QFLQAGK Unmodified 790.43374 0.43373813 2992 Q9CY64;A2ASB8;A2ASB7;A2ASB1 Blvra Biliverdin reductase A yes no 0 0 0 0 10 0 1 50.648 50.648 2 0.027115 11927 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.407 59.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16115 2992 15473 37545 43570 43570 1 QFLSETEK Unmodified 980.48148 0.48147619 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 52.705 52.705 2 0.0028653 17279 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.07 41.699 752.45 461.02 645.17 798.5 896.98 679.15 707 484 638 775 912 658 6 5 5 5 5 4 184910 16116 3302 15474 37546;37547;37548;37549;37550 43571;43572;43573;43574;43575;43576 43576 6 QFLSGELEVELTPQGTLAER Unmodified 2216.1325 0.13247732 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 5.5 0.5 1 1 81.135 81.135 3 2.3429E-07 29971 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.552 49.768 40.533 28.156 16.594 48.793 26.377 49.349 38 28 19 46 28 47 2 1 1 1 1 2 10580 16117 3028 15475 37551;37552 43577;43578 43578 2 QFLTQLMQK Unmodified 1135.606 0.6059652 2618 Q8K4Z5 Sf3a1 Splicing factor 3A subunit 1 yes yes 0 0 0 0 8.33 5.19 1 2 75.392 75.392 2;3 0.0011886 19874 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.46 26.391 40.565 18.532 19.344 49.986 15.543 89.1 38 19 19 46 19 84 2 1 1 1 1 2 5997.5 16118 2618 15476 37553;37554;37555 43579;43580;43581 43581 3 QFPALGLDPCLLEDELDK Unmodified 2072.0136 0.013607739 164 A0A0R4J087;Q8BJI1;A0A0R4J252 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17 yes no 0 0 0 0 5 0 1 94.37 94.37 3 0.043651 35263 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.152 11.319 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16119 164 15477 37556 43582 43582 1 QFQDAGHFDAENIK Unmodified 1618.7376 0.73758431 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 54.412 54.412 3 1.1278E-21 18532 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.6 105.17 176.05 209.39 321.28 161.19 295.42 228.22 166 213 316 167 297 222 2 3 3 2 2 2 31799 16120 551 15478 37557;37558;37559 43583;43584;43585 43583 3 QFSHTTAALEEVSR Unmodified 1574.7689 0.76888444 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 5 0 1 47.807 47.807 3 0.061703 14893 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 31.876 8.9968 48.844 35.128 56.587 37.068 0 0 46 37 56 37 0 0 1 1 1 1 0 0 2254.9 16121 3192 15479 37560 43586 43586 1 QFSLFLGK Unmodified 938.52255 0.52255314 1584 P48774;E9PVM7;E9PV63 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 9.25 4.82 1 1 1 1 76.006 76.006 2 0.011089 20115 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.85 61.053 375.4 292.3 279.12 237.35 187.33 341.1 352 306 273 232 195 325 3 3 2 2 2 3 114520 16122 1584 15480 37561;37562;37563;37564 43587;43588;43589;43590 43589 4 QFSQYIK Unmodified 912.47052 0.47051757 1573 P47962 Rpl5 60S ribosomal protein L5 yes yes 0 0 0 0 9 0 1 56.498 56.498 2 0.027049 16193 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.37 31.555 138.53 97.882 78.037 116.67 0 0 130 102 83 111 0 0 1 1 1 1 0 0 9087.1 16123 1573 15481 37565 43591 43591 1 QFYDQALQQAVMDDDANNAK Unmodified 2284.0066 0.0066248805 1525 P35762;A0A140LJL0 Cd81 CD81 antigen yes no 0 0 0 0 5 0.816 1 1 1 72.821 72.821 3 4.6673E-13 26662 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.26 93.008 29.945 19.571 0 69.595 18.987 47 28 19 0 64 19 47 2 1 0 2 1 1 10568 16124 1525 15482 37566;37567;37568 43592;43593;43594 43593 3 QGADTLAFMSLLEEK Unmodified 1651.8127 0.81272309 768 D3Z3F4;F7C846;G3XA66;P47802;G3UXX9 Mtx1 Metaxin-1 yes no 0 0 0 0 6 0 1 90.054 90.054 3 0.05116 34100 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 32.191 11.238 0 0 14.267 19.766 8.0013 14.696 0 0 14 19 9 14 0 0 1 1 1 1 885.16 16125 768 15483 37569 43595 43595 1 QGAEIDGR Unmodified 844.40389 0.40389457 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 2.5 0.5 1 1 29.417 29.417 2 0.0091508 6760 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.98 11.938 78.808 63.071 46.377 85.338 139.16 67.48 74 65 46 83 139 65 2 2 1 2 2 1 20607 16126 1333 15484 37570;37571 43596;43597 43596 2 QGAFLVNTAR Unmodified 1075.5774 0.57744226 114 A0A0J9YU62;O88712;A0A0J9YUM4 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 8 0.816 1 1 1 49.853 49.853 2 7.1048E-05 13840 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.4 65.097 49.128 93.448 67.461 78.973 214.29 142.06 46 92 65 74 213 139 1 2 1 1 2 2 16441 16127 114 15485 37572;37573;37574 43598;43599;43600 43599 3 QGAIVAVTGDGVNDSPALK Unmodified 1810.9425 0.94249171 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 7.78 2.9 1 4 1 1 2 63.978 63.978 2;3;4 1.4917E-19 22855 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.44 109.53 622.54 436.9 464.24 412.34 576.69 369.19 584 456 457 399 575 356 7 8 7 7 7 7 291980 16128 106;2253;2699 15486 37575;37576;37577;37578;37579;37580;37581;37582;37583 43601;43602;43603;43604;43605;43606;43607;43608;43609;43610;43611 43610 11 QGAIVAVTGDGVNDSPALK Deamidation (N) 1811.9265 0.92650729 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 0 8 3.56 1 1 1 65.878 65.878 3 4.7305E-11 23816 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.36 62.965 98.261 35.777 46.106 47.277 71.568 106.69 92 37 47 47 74 102 2 1 2 2 2 2 15430 16129 106;2253;2699 15486 37584;37585;37586 43612;43613;43614 43614 42 3 QGAIVAVTGDGVNDSPALKK Unmodified 1939.0375 0.037454724 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 1 9 2.94 1 1 1 59.168 59.168 3 1.7614E-10 19905 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.213 72.746 97.908 70.868 75.749 114.39 128.44 66.408 92 74 74 111 130 65 2 2 1 3 3 2 17235 16130 106;2253;2699 15487 37587;37588;37589 43615;43616;43617 43615 3 QGALIASALIMIQQTEITCPK Unmodified 2285.2123 0.21232432 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 12 0 1 98.811 98.811 4 0.0081181 28212 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.015 24.85 5.253 0 18.825 14.015 8.7702 0 5 0 18 14 9 0 1 0 1 1 1 0 961.68 16131 1943 15488 37590 43618 43618 1 QGANINEIR Unmodified 1013.5254 0.52540669 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 8.5 4.5 1 1 38.525 38.525 2 0.012693 10549 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.006 26.67 0 47.858 64.959 56.106 65.413 0 0 46 65 56 65 0 0 1 1 1 1 0 14455 16132 1668 15489 37591;37592 43619;43620 43620 2 QGAPAPAPPPAVR Unmodified 1227.6724 0.67240528 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 5 0 1 40.515 40.515 3 0.0021889 11371 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.343 37.566 0 20.216 0 59.064 55.863 0 0 19 0 55 56 0 0 1 0 1 1 0 3023.9 16133 1999 15490 37593 43621 43621 1 QGDTAILR Unmodified 872.47158 0.4715802 13 Q3TYE5;A0A087WP80;Q8BLK3;A0A087WP06 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 13 0 1 39.601 39.601 2 0.040516 11254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.494 10.391 0 165.6 150.2 0 216.52 0 0 158 148 0 207 0 0 1 1 0 1 0 12550 16134 13 15491 37594 43622 43622 1 QGEDAEVVCR Unmodified 1161.5084 0.508436 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 1 0 1 34.774 34.774 2 4.1536E-05 8934 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.1 64.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16135 1180 15492 37595 43623 43623 1 QGEEEDAEIIVK Unmodified 1358.6565 0.65654002 1968 Q3UEB3 Puf60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 0 2 0 1 56.338 56.338 3 0.0092981 19039 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 48.14 14.255 39.588 0 19.061 29.132 17.858 19.744 37 0 19 28 19 19 1 0 1 1 1 1 1634.1 16136 1968 15493 37596 43624 43624 1 QGEEFEQK Unmodified 993.44034 0.44033966 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 41.358 41.358 2;3 0.0063915 12139 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.886 43.496 128.26 136.88 0 58.579 139.8 84.489 120 139 0 56 139 83 1 2 0 1 1 1 19066 16137 3306 15494 37597;37598;37599;37600 43625;43626;43627;43628 43627 4 QGEEFGR Unmodified 821.36678 0.36678078 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 3 0 1 32.162 32.162 2 0.027104 8389 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.629 63.429 63.57 67.815 78.621 55.39 60.216 0 60 69 79 56 60 0 1 1 1 1 1 0 5823.3 16138 2792 15495 37601 43629 43629 1 QGESATLR Unmodified 860.43519 0.4351947 765;1103;2192 D3Z396;Q8BG33;Q99PJ0;G5E8G3;Q6DFY2 Ntm;Opcml Neurotrimin no no 0 0 0 0 6.67 4.5 1 1 1 28.32 28.32 2 0.0017576 6584 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.41 60.066 346.35 129.26 322.81 98.526 282.39 330.95 325 130 309 93 279 315 3 2 3 1 3 2 64724 16139 765;1103;2192 15496 37602;37603;37604 43630;43631;43632;43633 43630 4 QGESKPDSQAK Unmodified 1173.5626 0.56258006 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 1 6 0 1 31.769 31.769 3 0.047434 6821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.154 27.048 39.324 51.279 19.917 38.036 64.769 42.924 37 51 23 37 65 42 1 1 1 1 1 1 2275.5 16140 450 15497 37605 43634 43634 1 QGETLALNER Unmodified 1129.5728 0.57275081 2871 Q99MK8;Q7TS64;Q8BVT9;Q3UYH7;E9PW16 Adrbk1;Adrbk2 Beta-adrenergic receptor kinase 1;Beta-adrenergic receptor kinase 2 yes no 0 0 0 0 4 0 1 43.164 43.164 2 0.013331 13001 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.593 31.518 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16141 2871 15498 37606 43635 43635 1 QGFGELLQAVPLADSFR Unmodified 1846.9577 0.95774784 1473 P28352;F6QA74 Apex1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 91.865 91.865 3 0.013599 32519 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.888 19.813 0 0 0 30.269 17.805 19.746 0 0 0 28 19 19 0 0 0 1 1 1 1342.6 16142 1473 15499 37607;37608 43636;43637 43637 2 QGFQCQVCCFVVHK Unmodified 1795.7957 0.79565001 1796;2030;1425 P68404;P20444;Q4VA93 Prkcb;Prkca Protein kinase C beta type;Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 9 0 1 60.088 60.088 3 1.7026E-07 17916 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.469 61.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16143 1796;1425;2030 15500 37609 43638 43638 1 QGFVPAAYVK Unmodified 1078.5811 0.58113065 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10 1.87 1 1 1 1 61.488 61.488 2;3 4.165E-05 18597 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.26 72.268 228.09 271.05 275.31 183.11 255.58 300.78 214 269 268 177 259 287 3 4 4 3 3 3 73589 16144 551 15501 37610;37611;37612;37613 43639;43640;43641;43642;43643 43640 5 QGGLGPMNIPLISDPK Unmodified 1635.8654 0.86542736 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 8 0 1 78.472 78.472 3 0.042992 27252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.302 8.6969 0 28.989 48.033 0 0 69.29 0 28 46 0 0 65 0 1 1 0 0 1 5713.6 16145 604 15502 37614 43644 43644 1 QGGSPMIEGVDDAK Unmodified 1402.6398 0.6398441 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 4 0 1 53.662 53.662 3 0.056658 18054 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 32.523 10.325 49.358 0 0 40.115 17.353 19.759 46 0 0 37 19 19 1 0 0 1 1 1 5722.4 16146 728 15503 37615 43645 43645 1 QGGTVVYGGK Unmodified 964.49779 0.49779495 3122 Q9DBF1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 0 6.5 0.5 1 1 42.593 42.593 2 0.0021187 11070 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.298 44.699 69.39 37.355 27.931 78.369 45.109 87.191 65 37 28 74 46 83 2 1 1 2 1 2 3810.8 16147 3122 15504 37616;37617 43646;43647 43647 2 QGHTEPQP Unmodified 892.40389 0.40389457 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 2 0.816 1 1 1 23.771 23.771 2 0.0062124 4085 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.86 91.827 202.26 170.8 183.94 174.36 262.67 179.34 190 176 181 171 264 172 3 4 4 2 3 3 90504 16148 852 15505 37618;37619;37620 43648;43649;43650;43651;43652 43649 5 QGIFQVVISR Unmodified 1145.6557 0.65569258 2730 Q91V61 Sfxn3 Sideroflexin-3 yes yes 0 0 0 0 10.5 0.5 1 1 68.589 68.589 2;3 0.00079381 19941 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.201 47.829 74 9.0786 29.751 0 0 20.254 74 9 28 0 0 19 1 1 1 0 0 1 16969 16149 2730 15506 37621;37622 43653;43654 43653 2 QGIQFYTQLK Unmodified 1224.6503 0.65027285 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 9 0 1 65.939 65.939 3 5.8396E-06 20723 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.813 44.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16150 3170 15507 37623 43655 43655 1 QGLLEFVDITATNNTSAIQDYLQQLTGAR Unmodified 3179.6099 0.60987118 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 0 0 0 0 9 0 1 111.9 111.9 4 2.4633E-12 37842 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.538 50.122 0 0 6.492 0 0 9.594 0 0 6 0 0 9 0 0 1 0 0 1 1077.7 16151 345 15508 37624 43656 43656 1 QGLLGINIAEK Unmodified 1154.6659 0.66592292 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 70.64 70.64 2;3 9.9808E-08 23662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.63 60.459 69.42 103.85 0 30.604 106.69 0 65 102 0 28 102 0 1 2 0 1 1 0 12650 16152 162 15509 37625;37626 43657;43658 43657 2 QGLLHVGDIIK Unmodified 1191.6976 0.69755739 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 0 0 0 8 0 1 63.797 63.797 3 0.00070784 20360 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.069 37.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16153 3241 15510 37627 43659 43659 1 QGLLPLTFADPSDYNK Unmodified 1777.8887 0.88866522 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 9.29 2.43 2 2 1 2 82.634 82.634 2;3;4 1.4773E-17 29984 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.4 104.67 177.71 116.93 150.38 245.88 74.119 98.101 167 121 149 242 74 93 5 3 4 6 2 3 96373 16154 2843 15511 37628;37629;37630;37631;37632;37633;37634 43660;43661;43662;43663;43664;43665;43666 43661 7 QGLLPSLEDLLFYTIAEGQEK Unmodified 2363.226 0.22604336 789 D3Z7P3 Gls Glutaminase kidney isoform, mitochondrial yes yes 0 0 0 0 9 0 1 114.83 114.83 3 7.3795E-05 38460 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.431 39.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 630.42 16155 789 15512 37635 43667 43667 1 QGLQCQVCSFVVHR Unmodified 1716.8188 0.81882829 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 9 0 1 54.958 54.958 3 0.0050922 15517 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.177 32.939 48.914 0 74.657 115.93 50.261 87.044 46 0 74 111 56 83 1 0 1 1 1 1 3475.3 16156 1783 15513 37636 43668 43668 1 QGLSGVPILSEEELSLLDEFYK Unmodified 2465.2577 0.25773741 2093 Q60865 Caprin1 Caprin-1 yes yes 0 0 0 0 6 0 1 102.77 102.77 3 1.1967E-07 37593 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.611 46.305 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16157 2093 15514 37637 43669 43669 1 QGLSSSIFTK Unmodified 1066.5659 0.56587452 3122 Q9DBF1;G3UYR8 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 10 2.16 1 1 1 61.344 61.344 2;3 0.00076438 18628 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.584 56.165 79.044 0 157.1 83.432 80.355 155.48 74 0 149 83 83 148 1 0 2 1 1 2 13172 16158 3122 15515 37638;37639;37640 43670;43671;43672 43671 3 QGNMTAALQAALK Unmodified 1315.6918 0.69182009 2901 Q9CPW4;Q3UA72 Arpc5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 0 9 0 1 68.442 68.442 2 2.0456E-12 21907 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.46 61.067 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16159 2901 15516 37641 43673 43673 1 QGPPLQQRPPPQGQQHLSGLGPPAGSPLPQR Unmodified 3219.7014 0.701361 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 7.5 0.5 1 1 50.449 50.449 4 1.1685E-26 14743 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.745 68.098 49.273 16.894 0 60.706 26.699 48.274 46 19 0 56 28 46 1 1 0 2 1 1 15449 16160 1282 15517 37642;37643 43674;43675 43674 2 QGPPQKPPGPAGPTR Unmodified 1483.7896 0.7895603 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 8.33 2.29 1 2 1 1 1 36.443 36.443 3;4 7.0997E-11 9465 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.02 90.259 635.58 408.54 724.85 618.67 459.81 593.09 598 430 721 607 468 565 7 6 8 6 5 6 138980 16161 1282 15518 37644;37645;37646;37647;37648;37649 43676;43677;43678;43679;43680;43681;43682;43683 43683 8 QGQDAIPPPDPGEQIFNLPK Unmodified 2160.0851 0.085133198 722 D3YYK8;E9Q6X0;Q8R001;Q3TG90 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 0 5 0 1 76.073 76.073 4 0.044165 28279 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.126 19.026 39.335 16.772 47.33 27.783 0 39.442 37 19 46 28 0 37 1 1 1 1 0 1 2352.5 16162 722 15519 37650 43684 43684 1 QGQDGLLSVK Unmodified 1043.5611 0.56112349 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 0 6 0 1 55.346 55.346 2 0.032452 17888 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.404 1.9997 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 1996 16163 1649 15520 37651 43685 43685 1 QGQDVAPPPNPGDQIFNK Unmodified 1920.933 0.93298965 2243 Q6PER3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes yes 0 0 0 0 6 0 1 62.156 62.156 3 2.5505E-05 21099 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.779 48.415 20.215 0 28.962 27.647 65.43 37.575 19 0 28 28 65 37 1 0 1 1 1 1 4148.7 16164 2243 15521 37652 43686 43686 1 QGQIDNQTR Deamidation (N) 1059.4945 0.49450049 551 A3KGU7;A3KGU9;P16546 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 2 0 1 28.237 28.237 2 0.014045 6320 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 109.83 66.995 69.136 43.182 65.818 35.294 65.078 37.585 65 46 65 37 65 37 1 1 1 1 1 1 6241.9 16165 551 15522 37653 43687 43687 155 1 QGQIDNQTR Unmodified 1058.5105 0.51048491 551 A3KGU7;A3KGU9;P16546 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.33 0.471 2 1 25.732 25.732 2;3 0.00059522 4985 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.64 58.105 197.36 157.18 239.75 92.516 219.78 85.868 186 164 231 93 217 83 3 3 2 2 3 1 38804 16166 551 15522 37654;37655;37656 43688;43689;43690 43690 3 QGQVEDEWYSLSGR Unmodified 1652.7431 0.74306362 2503 Q8C5G6;Q9QZ06;F7AT44;A9JEI5 Tollip Toll-interacting protein yes no 0 0 0 0 4 0 1 63.636 63.636 3 3.0809E-05 22602 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.69 66.998 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3682.3 16167 2503 15523 37657 43691 43691 1 QGQYSPMAIEEQVAVIYAGVR Unmodified 2308.1522 0.15216691 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8.67 3.09 1 1 1 88.424 88.424 3 2.5729E-17 33264 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.62 85.849 50.072 0 60.34 41.037 64.118 57.866 47 0 56 38 65 56 2 0 2 1 2 2 30131 16168 1881 15524 37658;37659;37660 43692;43693;43694 43692 3 QGSATVGLK Unmodified 859.47633 0.47633123 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 8 0 1 43.435 43.435 2 0.018724 10689 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.19 13.02 39.238 35.93 47.418 0 75.428 57.544 37 37 46 0 74 56 1 1 1 0 1 1 4514.7 16169 3313 15525 37661 43695 43695 1 QGTFHSQQALEYGTK Unmodified 1693.806 0.80599822 3337 Q9WUM5 Suclg1 Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial yes yes 0 0 0 0 9.5 3.5 1 1 46.157 46.157 3 2.3634E-22 13532 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.76 108.89 39.082 45.209 65.794 36.52 0 39.442 37 46 65 37 0 37 1 1 1 1 0 1 6419.8 16170 3337 15526 37662;37663 43696;43697 43696 2 QGVAEAAGK Unmodified 829.42938 0.42938104 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 0 7.2 2.99 2 1 1 1 37.898 37.898 2;3 0.00029504 9679 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.86 32.948 745.74 708.46 1166.8 979.39 773.93 1253.9 700 696 1145 973 819 1197 4 4 3 5 4 5 176410 16171 1232 15527 37664;37665;37666;37667;37668 43698;43699;43700;43701;43702 43700 5 QGVNNAEK Unmodified 858.41954 0.41954463 789 D3Z7P3;D3Z7P4;F6U529 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 5 0 1 30.827 30.827 2 0.0089096 6764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.948 27.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16172 789 15528 37669 43703 43703 1 QGVTEAAEK Unmodified 931.46108 0.4610751 2788;3356 Q91ZZ3;Q9Z0F7 Sncb;Sncg Beta-synuclein;Gamma-synuclein no no 0 0 0 0 6.25 3.96 1 1 1 1 37.859 37.859 2 0.00044315 10181 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.75 38.439 912.67 539.67 1061.9 617.16 802.33 1000.5 859 569 1041 634 827 960 5 4 5 4 5 5 164690 16173 2788;3356 15529 37670;37671;37672;37673 43704;43705;43706;43707;43708 43707 5 QHAFGMAENEDFR Unmodified 1550.6572 0.6572255 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 46.589 46.589 3 1.1997E-15 14048 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.91 122.1 179.42 115.92 91.471 162.65 252.19 103.64 168 121 92 157 250 102 3 3 2 3 3 2 66711 16174 2173 15530 37674;37675;37676;37677 43709;43710;43711;43712 43712 4 QHAFGMAENEDFR Oxidation (M) 1566.6521 0.65214012 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 1 0 4 0 1 40.167 40.167 3 0.027806 11570 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.436 36.46 0 29.792 0 0 0 29.848 0 28 0 0 0 28 0 1 0 0 0 1 3672.7 16175 2173 15530 37678 43713 43713 166 1 QHAFSMAR Unmodified 946.44432 0.4443196 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7 0 1 32.424 32.424 3 0.00065401 6375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.72 85.482 59.229 73.367 82.238 64.37 94.321 0 56 74 83 65 93 0 1 1 1 1 1 0 10288 16176 1282 15531 37679 43714 43714 1 QHGIPIPVTPK Unmodified 1185.687 0.68699271 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 8.5 0.5 1 1 51.13 51.13 3 0.0076084 14437 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.454 26.316 108.77 77.509 186.93 180.42 43.048 195.98 102 74 185 176 46 185 1 1 2 2 1 2 18324 16177 1393 15532 37680;37681 43715;43716 43715 2 QHGSNTFTVK Unmodified 1117.5516 0.55162144 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 7.5 0.5 1 1 36.935 36.935 3 2.4606E-05 7765 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.53 67.643 222.41 184.6 153.52 214.78 181.4 217.62 209 190 162 208 190 209 2 2 2 2 2 2 13572 16178 1157;2210 15533 37682;37683 43717;43718 43718 2 QHIELALEK Unmodified 1079.5975 0.597509 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 6 0 1 52.147 52.147 3 0.00063783 16351 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.261 44.705 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16179 2517 15534 37684 43719 43719 1 QHIEVLK Unmodified 865.50215 0.50215205 2249;1027 Q6PH08;Q3UHT7;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 6.5 0.5 1 1 42.879 42.879 3 0.017825 11140 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.169 26.182 138.96 0 89.408 0 111.15 174.85 130 0 83 0 112 167 2 0 1 0 2 2 6489.3 16180 2249;1027 15535 37685;37686 43720;43721 43721 2 QHLVEVR Unmodified 879.49265 0.49265 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 5 0 1 32.834 32.834 3 0.065316 7659 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.117 5.3107 29.679 27.151 38.255 0 0 0 28 28 37 0 0 0 1 1 1 0 0 0 2105.1 16181 3204 15536 37687 43722 43722 1 QHQASDEIR Unmodified 1082.5105 0.51048491 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 2 0 1 21.974 21.974 3 0.00056196 3806 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.111 51.131 0 24.094 22.594 19.006 22.035 33.483 0 23 23 19 23 32 0 1 1 1 1 1 3075.5 16182 893 15537 37688 43723 43723 1 QHSAILAAPNPDEK Unmodified 1489.7525 0.75250609 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 0 7.2 2.99 2 1 1 1 44.928 44.928 3;4 2.6382E-11 13000 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.62 95.939 316.36 214.24 425.97 290.72 557.55 431.31 297 213 416 288 558 417 4 2 3 3 4 4 88997 16183 1696 15538 37689;37690;37691;37692;37693 43724;43725;43726;43727;43728 43726 5 QHTFVETESVR Unmodified 1331.647 0.64697839 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 4 0 1 36.725 36.725 3 0.0058484 9969 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.79 45.418 30.044 0 0 39.747 36.876 0 28 0 0 37 37 0 1 0 0 1 1 0 2573.4 16184 2073 15539 37694 43729 43729 1 QHTVTTTTK Unmodified 1015.5298 0.52982336 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 27.364 27.364 3 0.0021972 4157 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.885 55.725 84.267 129.52 84.663 120.29 160.04 107.45 79 125 84 116 157 102 3 4 2 3 4 2 20958 16185 1307 15540 37695;37696;37697;37698;37699 43730;43731;43732;43733;43734 43733 5 QHVIDGEK Unmodified 924.46649 0.46649483 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 0 6 0 1 34.641 34.641 3 0.046105 8137 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.349 11.599 0 29.792 0 60.563 34.269 48.058 0 28 0 56 37 46 0 1 0 1 1 1 2872.1 16186 1599 15541 37700 43735 43735 1 QHVLEAFQFCF Unmodified 1424.6547 0.6547063 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 9 0 1 82.662 82.662 2 0.005252 28481 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.435 57.018 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1908.6 16187 2138 15542 37701 43736 43736 1 QHVLQQQQEER Unmodified 1421.7011 0.70113922 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 7 3.54 1 1 1 1 27.478 27.478 3 2.7679E-05 6011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.163 64.163 50.198 35.837 13.478 33.336 9.414 0 47 37 14 32 9 0 2 2 2 3 1 0 8729.1 16188 1275 15543 37702;37703;37704;37705 43737;43738;43739;43740 43737 4 QHYIDLK Unmodified 915.48142 0.48141661 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 0 6.5 0.5 1 1 46.059 46.059 3 0.0053774 13508 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.302 51.276 217.02 190.3 152.57 131.95 143.91 140.87 204 195 158 130 148 136 2 2 2 1 1 1 30006 16189 866 15544 37706;37707 43741;43742 43741 2 QIAAVMQR Unmodified 915.49602 0.49602082 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 8.5 0.5 1 1 45.842 45.842 2 0.001259 11955 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.81 65.924 237.72 0 261.3 203.95 183.35 122.69 223 0 251 204 185 120 2 0 2 2 1 1 39985 16190 1311 15545 37708;37709 43743;43744 43743 2 QIASLTGLVQSALFK Unmodified 1574.9032 0.90319307 504 D3Z781;E9QAU4;A2AQ25 Etl4;Skt Sickle tail protein yes no 0 0 0 0 12 0 1 93.575 93.575 3 8.8684E-05 26867 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 69.729 46.124 0 39.368 0 0 0 39.442 0 37 0 0 0 37 0 1 0 0 0 1 5460.4 16191 504 15546 37710 43745 43745 1 QIASLTGLVQSALLR Unmodified 1568.925 0.92499115 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 4.5 4.96 4 1 1 90.494 90.494 2;3 7.3933E-18 25455 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.48 97.746 36.482 39.216 0 55.861 51.826 9.594 34 38 0 52 52 9 2 2 0 3 3 1 26837 16192 573 15547 37711;37712;37713;37714;37715;37716 43746;43747;43748;43749;43750;43751;43752 43752 7 QIDATYVR Unmodified 964.49779 0.49779495 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 6 0 1 44.433 44.433 2 0.051648 12742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.969 34.44 0 59.584 0 80.882 0 69.29 0 56 0 74 0 65 0 1 0 1 0 1 7695.2 16193 1995 15548 37717 43753 43753 1 QIDNPDYK Unmodified 991.46108 0.4610751 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 7 3.54 1 1 1 1 44.475 44.475 2;3 0.0028653 13717 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.07 67.15 99.129 215.5 313.81 280.7 178.53 272.07 93 213 314 277 185 260 1 3 4 4 2 3 34188 16194 1375 15549 37718;37719;37720;37721 43754;43755;43756;43757 43754 4 QIEAQEKPR Unmodified 1097.5829 0.58292157 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 5.5 0.5 1 1 34.427 34.427 3 0.00092055 8443 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.48 58.647 247.48 118.31 145.27 102.83 102.73 224.13 232 120 139 102 102 213 2 1 1 1 1 2 37758 16195 2148 15550 37722;37723 43758;43759 43758 2 QIEEHGR Unmodified 867.41988 0.41987898 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 3.5 0.5 1 1 20.334 20.334 3 0.0058083 2980 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.206 38.786 0 0 20.558 0 28.62 19.437 0 0 19 0 28 19 0 0 1 0 1 1 9050.2 16196 1999 15551 37724;37725 43760;43761 43761 2 QIEELKGQEVSPK Unmodified 1483.7882 0.7882229 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 1 7.75 3.11 1 1 1 1 51.904 51.904 3 0.00024342 16308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.228 61.75 859.21 466.57 911.36 748.97 701.18 850.91 808 484 903 747 714 817 4 3 4 4 3 4 74561 16197 3302 15552 37726;37727;37728;37729 43762;43763;43764;43765 43763 4 QIEELYLVSV Unmodified 1191.6387 0.63870511 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 6 0 1 88.826 88.826 2 0.031854 33436 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.563 29.961 0 0 0 9.1293 37.624 19.18 0 0 0 9 37 19 0 0 0 1 1 1 958.81 16198 2753 15553 37730 43766 43766 1 QIEETLSHFR Unmodified 1258.6306 0.63060004 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 6.5 1.12 1 1 1 1 54.602 54.602 3 5.6476E-08 17464 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 139.32 96.293 236.11 155.57 220.63 227.52 196.11 280.09 222 158 223 222 203 268 4 3 4 3 3 4 53777 16199 1055 15554 37731;37732;37733;37734 43767;43768;43769;43770 43768 4 QIEGHTICALGDGAAWPVQGLIR Unmodified 2461.2536 0.25361228 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 8 0 1 75.355 75.355 3 8.5044E-10 25835 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.425 54.436 0 29.792 0 0 29.288 0 0 28 0 0 28 0 0 1 0 0 1 0 4307.2 16200 680 15555 37735 43771 43771 1 QIFDEYENETFLCHR Unmodified 1999.8734 0.87342586 798 E0CXA9;Q6PEB6;G8JL35;E0CYJ0 Mob4 MOB-like protein phocein yes no 0 0 0 0 4.5 0.5 1 1 68.01 68.01 3 2.362E-05 24421 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.966 64.481 59.573 34.392 57.382 18.988 37.83 0 56 37 56 19 37 0 2 2 2 1 1 0 7140.1 16201 798 15556 37736;37737 43772;43773 43773 2 QIFGDYK Unmodified 869.42832 0.42831841 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 8 0.816 1 1 1 58.28 58.28 2;3 0.004882 17041 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.28 63.046 803.99 514.1 966.59 835.8 1255.7 1760.4 754 505 960 839 1262 1685 3 2 4 4 3 4 378590 16202 1666 15557 37738;37739;37740 43774;43775;43776;43777 43777 4 QIFGEATK Unmodified 892.46543 0.46543219 1049 F8WIR1;P18242;F6Y6L6 Ctsd Cathepsin D yes no 0 0 0 0 9.33 2.62 1 1 1 53.295 53.295 2 0.0074134 16050 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.52 51.746 246.51 206.12 232.72 81.182 301.7 0 232 213 231 83 292 0 2 2 2 1 2 0 29633 16203 1049 15558 37741;37742;37743 43778;43779;43780 43778 3 QIFGQNFIPPK Unmodified 1287.6976 0.69755739 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 10.5 0.5 1 1 71.329 71.329 3 0.002418 21064 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.542 34.156 0 58.63 57.074 0 58.576 0 0 56 56 0 56 0 0 1 1 0 1 0 14779 16204 1042 15559 37744;37745 43781;43782 43781 2 QIFLGGVDK Unmodified 975.53893 0.53893149 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 0 10 0 1 63.972 63.972 2 0.001476 17768 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.65 44.365 0 68.095 63.687 57.412 0 108.73 0 65 65 56 0 102 0 1 1 1 0 1 6463.2 16205 1607 15560 37746 43783 43783 1 QIFLGGVDKR Unmodified 1131.64 0.64004252 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 0 0 0 1 10.5 1.12 1 1 1 1 54.17 54.17 3 7.3678E-06 13125 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.82 65.778 1100.6 1022.3 1126.8 837 161.31 1008.1 1035 1071 1108 830 170 950 3 4 2 3 1 3 226590 16206 1607 15561 37747;37748;37749;37750 43784;43785;43786;43787 43786 4 QIFLGGVDR Unmodified 1003.5451 0.5450795 1585 P48962 Slc25a4 ADP/ATP translocase 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 58.639 58.639 2 0.0023713 18723 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.311 39.22 1241.6 694.75 1365.5 867.16 130.51 1325.6 1168 726 1342 857 130 1247 4 3 4 3 1 4 259900 16207 1585 15562 37751;37752;37753;37754 43788;43789;43790;43791 43788 4 QIGDNLIVPGGVK Unmodified 1308.7402 0.74015049 836 Q3TT92;E9PWE8;Q62188 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 7.5 0.5 1 1 66.95 66.95 3 0.00027241 22490 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.352 50.081 108.01 55.558 193.84 55.031 225.53 151.33 102 56 185 56 223 148 2 1 2 1 2 2 17270 16208 836 15563 37755;37756 43792;43793 43792 2 QIGEHLLLK Unmodified 1049.6233 0.62332982 2940 Q9CQS4 Slc25a46 Solute carrier family 25 member 46 yes yes 0 0 0 0 8 0 1 56.606 56.606 3 0.021894 17026 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.64 19.897 78.834 23.21 75.752 56.693 0 0 74 28 74 56 0 0 1 1 1 1 0 0 2196.2 16209 2940 15564 37757 43794 43794 1 QIGENLIVPGGIK Unmodified 1336.7715 0.77145062 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 8 0 1 70.243 70.243 3 0.0015427 23401 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.21 24.802 88.286 41.405 94.883 63.158 118.67 114.94 83 46 93 65 120 111 1 1 1 1 1 1 8801.2 16210 207 15565 37758 43795 43795 1 QIGENLIVPGGVK Unmodified 1322.7558 0.75580056 2212;1850;1158 O08553;P97427;Q6P1J1;Q71H75 Dpysl2;Crmp1 Dihydropyrimidinase-related protein 2;Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.22 2.04 1 4 1 1 1 1 67.341 67.341 2;3;4 3.7747E-08 22670 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.72 93.257 1119.9 1001.1 1153 743.57 1516.5 1231.4 1053 1030 1134 747 1511 1194 10 12 8 8 9 10 661540 16211 1158;1850;2212 15566 37759;37760;37761;37762;37763;37764;37765;37766;37767 43796;43797;43798;43799;43800;43801;43802;43803;43804;43805;43806;43807 43797 12 QIGNVAALPGIVHR Deamidation (N) 1444.815 0.81504677 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 1 0 0 8 0 1 58.749 58.749 3 0.0028967 18024 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.092 26.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16212 2862 15567 37768 43808 43808 1016 1 QIGWFPANYVK Unmodified 1321.6819 0.68190733 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9;CON__ENSEMBL:ENSBTAP00000001528 Itsn1 Intersectin-1 yes no 0 0 0 0 10.5 0.5 1 1 75.018 75.018 3 0.0011093 22223 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.5 43.508 0 0 0 39.747 36.876 46 0 0 0 37 37 46 0 0 0 1 1 1 10686 16213 876 15568 37769;37770 43809;43810 43810 2 QIGWLTEQLPSGGTAPTLALLTEK Unmodified 2523.3585 0.35845451 481 A2AKD7;Q61234 Snta1 Alpha-1-syntrophin yes no 0 0 0 0 9 0 1 94.022 94.022 3 4.5604E-05 33600 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.029 34.94 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 870.6 16214 481 15569 37771 43811 43811 1 QIIEDQSGHYIWVPSPEKL Unmodified 2238.1321 0.13208339 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 1 6 0 1 73.94 73.94 4 0.0052259 26589 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.384 31.675 39.701 0 0 61.208 0 39.442 37 0 0 56 0 37 1 0 0 1 0 1 11586 16215 538 15570 37772 43812 43812 1 QIIEEQSGPYIWVPAK Unmodified 1856.9672 0.96724989 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg1 Disks large homolog 1 yes no 0 0 0 0 7 0 1 76.993 76.993 3 0.0039949 27111 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.297 24.702 0 28.989 48.033 0 0 29.848 0 28 46 0 0 28 0 1 1 0 0 1 3212.4 16216 767 15571 37773 43813 43813 1 QIIEQLSSGFFSPK Unmodified 1579.8246 0.8246084 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 11.2 0.829 1 1 2 85.804 85.804 2;3 5.1803E-20 24043 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.3 93.738 0 0 0 60 0 38 0 0 0 60 0 38 0 0 0 1 0 1 26086 16217 3331 15572 37774;37775;37776;37777 43814;43815;43816;43817 43817 4 QIIQQNPSLLPALLQQIGR Unmodified 2129.2321 0.23207221 1621 P54728 Rad23b UV excision repair protein RAD23 homolog B yes yes 0 0 0 0 11.5 1.12 1 1 1 1 89.849 89.849 2;3 5.1154E-07 35614 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.263 53.774 53.384 18.631 28.881 28.388 51.439 78.482 50 19 28 28 53 75 2 1 1 1 2 2 9342.5 16218 1621 15573 37778;37779;37780;37781 43818;43819;43820;43821 43821 4 QIIVEEAK Unmodified 928.52295 0.52294707 1549 P45591;A0A1Y7VJ71 Cfl2 Cofilin-2 yes no 0 0 0 0 8 3.56 1 1 1 52.193 52.193 2 0.0055472 16462 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.84 41.619 196.82 160.26 260.36 232.42 241.56 203.92 185 158 260 231 241 195 2 2 3 3 2 2 25381 16219 1549 15574 37782;37783;37784 43822;43823;43824 43823 3 QILDTEDELR Unmodified 1230.6092 0.6091959 373 Q6PDS5;A0A2I3BPC1;Q01065;A0A2I3BR90 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 2.5 0.5 1 1 57.016 57.016 2 2.5336E-08 19828 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 143.96 80.677 39.101 31.292 74.376 81.211 37.408 29.848 37 32 74 79 37 28 2 1 2 2 1 1 12632 16220 373 15575 37785;37786 43825;43826 43826 2 QILELEER Unmodified 1028.5502 0.55022446 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 3.5 0.5 1 1 56.639 56.639 2 0.023508 19525 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.17 9.2078 29.768 130.53 27.816 22.674 42.89 88.478 28 125 28 23 42 83 1 2 1 1 1 1 36083 16221 1557 15576 37787;37788 43827;43828 43828 2 QILGQAK Unmodified 756.44939 0.4493882 2157 Q62425 Ndufa4 Cytochrome c oxidase subunit NDUFA4 yes yes 0 0 0 0 10 1.87 1 1 1 1 46.224 46.224 2 0.0091343 11402 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.89 47.139 670.29 339.23 987.67 710.45 838.05 505.64 629 369 964 699 849 487 3 3 4 2 4 3 155610 16222 2157 15577 37789;37790;37791;37792 43829;43830;43831;43832 43830 4 QILLGPNTGLSGGMPGALPPLPGK Unmodified 2284.2613 0.26132342 2894 Q9CPQ3;A0A2R8VHM4 Tomm22 Mitochondrial import receptor subunit TOM22 homolog yes no 0 0 0 0 10.5 0.5 1 1 85.119 85.119 3 6.7597E-19 27266 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.413 64.987 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 3411.9 16223 2894 15578 37793;37794 43833;43834 43833 2 QILLPFR Unmodified 885.54362 0.54362294 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 12 1 1 1 69.314 69.314 2 0.029269 19766 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.866 11.556 222 77.171 93.605 53.669 104.23 0 222 74 93 56 102 0 1 1 1 1 1 0 89333 16224 628;2074 15579 37795;37796 43835;43836 43835 2 QILLYSATFPLSVQK Unmodified 1706.9607 0.96070795 1624 P54823 Ddx6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 0 3.75 4.76 3 1 86.14 86.14 3;4 5.8501E-06 23920 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.46 83.587 0 94.315 37.374 41.007 19.197 69.808 0 93 37 38 19 66 0 2 2 2 1 3 17096 16225 1624 15580 37797;37798;37799;37800 43837;43838;43839;43840 43840 4 QILSADLR Unmodified 914.51853 0.5185304 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 6.5 0.5 1 1 53.488 53.488 2 0.012552 16183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.921 26.813 0 118.1 0 149.4 134.27 124.09 0 111 0 139 139 120 0 1 0 1 1 1 9393.8 16226 1899 15581 37801;37802 43841;43842 43842 2 QILVGDIGDTVEDPYTSFVK Unmodified 2195.0998 0.099780209 1549 P45591 Cfl2 Cofilin-2 yes yes 0 0 0 0 7.33 2.62 1 2 2 1 85.745 85.745 3;4 6.5988E-11 31426 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.063 50.498 90.664 150.64 106.37 184.35 172.88 96.828 85 149 111 176 175 93 3 5 3 4 4 3 24298 16227 1549 15582 37803;37804;37805;37806;37807;37808 43843;43844;43845;43846;43847;43848 43847 6 QIMGGFK Unmodified 779.4 0.39999517 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 10 0 1 56.433 56.433 2 0.030245 14416 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.086 38.238 410.31 204.84 475.98 311.54 407.79 379.59 386 226 466 318 416 367 1 1 1 1 1 1 35333 16228 2133 15583 37809 43849 43849 1 QINPTLGSQEDFKDLLQSAK Unmodified 2231.1434 0.14337636 1348 P10852;A0A0U1RP98;A0A0U1RPL8 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 1 7.5 0.5 1 1 75.676 75.676 3 1.2809E-10 25960 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.975 64.469 59.701 18.196 49.622 0 0 69.29 56 19 46 0 0 65 2 1 1 0 0 2 7249.1 16229 1348 15584 37810;37811 43850;43851 43851 2 QINQEEFK Unmodified 1034.5033 0.50327426 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 5 0 1 49.102 49.102 2 0.010724 15590 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.331 43.545 0 0 0 39.925 27.454 0 0 0 0 37 28 0 0 0 0 1 1 0 2609.7 16230 1388 15585 37812 43852 43852 1 QIPQATASMK Unmodified 1073.5539 0.55392962 2138 Q61753;F6ZSB7 Phgdh D-3-phosphoglycerate dehydrogenase yes no 0 0 0 0 8 0 1 49.033 49.033 3 0.010586 13419 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.259 29.421 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16231 2138 15586 37813 43853 43853 1 QIQLAQK Unmodified 827.4865 0.48650199 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;F6VV02 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 8 0 1 48.328 48.328 2 0.017391 13085 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.61 41.179 48.873 40.605 47.089 0 60.769 57.962 46 42 46 0 60 56 1 1 1 0 1 1 4194.8 16232 589 15587 37814 43854 43854 1 QIQSLCFQVNNLLEK Unmodified 1832.9455 0.94546859 1270 O88544 Cops4 COP9 signalosome complex subunit 4 yes yes 0 0 0 0 9 0 1 81.52 81.52 3 0.0002936 28023 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.335 45.088 0 48.323 37.135 0 66.701 37.539 0 46 37 0 65 37 0 1 1 0 1 1 5920.9 16233 1270 15588 37815 43855 43855 1 QISEDVDGPDNR Unmodified 1343.5953 0.59533675 1559 P46935 Nedd4 E3 ubiquitin-protein ligase NEDD4 yes yes 0 0 0 0 1 0 1 40.828 40.828 3 0.0002543 11479 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.089 46.853 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1844.3 16234 1559 15589 37816 43856 43856 1 QISLPAK Unmodified 755.45414 0.45413923 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;A0A0J9YTY6;Q80X52;E9Q579;A0A0J9YUX4;A0A0J9YUJ4;G3UX09;G3UY41 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 9 0 1 54.152 54.152 3 0.018342 15061 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.682 21.915 108.3 69.206 133.23 61.39 91.143 96.537 102 74 130 65 93 93 1 1 1 1 1 1 7352.7 16235 3075 15590 37817 43857 43857 1 QISNLQQSISDAEQR Unmodified 1715.8438 0.84384029 657 CON__P04264 yes yes 0 0 0 0 5 0 1 57.711 57.711 2 6.9922E-06 19658 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.593 53.25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 16236 657 15591 37818 43858 43858 1 QITEEVER Unmodified 1002.4982 0.49818889 2314 Q80U63 Mfn2 Mitofusin-2 yes yes 0 0 0 0 3 0 1 39.965 39.965 2 0.027077 12041 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.399 12.169 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16237 2314 15592 37819 43859 43859 1 QITIEEGEQR Unmodified 1201.5939 0.59388018 1697 P61294 Rab6b Ras-related protein Rab-6B yes yes 0 0 0 0 5.75 4.21 2 1 1 43.845 43.845 2;3 3.1724E-05 13801 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.62 80.754 78.801 72.046 132.13 115.74 36.007 147.68 74 74 130 111 38 139 1 2 3 3 2 3 17029 16238 1697 15593 37820;37821;37822;37823 43860;43861;43862;43863 43860 4 QITITGTPANISLAQYLINAR Unmodified 2257.243 0.24303082 1647 P57722;G3UYM5 Pcbp3 Poly(rC)-binding protein 3 yes no 0 0 0 0 10 0 1 87.007 87.007 3 0.0072603 28022 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.391 15.452 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16239 1647 15594 37824 43864 43864 1 QITLNDLPVGR Unmodified 1224.6826 0.68263561 610 B1AZS9;O08807 Prdx4 Peroxiredoxin-4 yes no 0 0 0 0 7.4 0.8 1 1 3 63.765 63.765 2;3 2.2365E-42 21780 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 199.4 0 266.54 159.31 151.82 202.01 226.82 66.092 250 169 151 197 224 62 3 3 2 3 2 1 54612 16240 610 15595 37825;37826;37827;37828;37829 43865;43866;43867;43868;43869 43865 5 QITQVYGFYDECLR Unmodified 1790.8298 0.82977013 1787;1731 P62715;P97470;P63330 Ppp2cb;Ppp4c;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 4 catalytic subunit;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 6.5 0.5 1 1 71.327 71.327 3 4.2189E-05 24518 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.676 86.391 172.77 95.25 97.415 89.308 56.894 114.06 162 102 97 88 56 107 3 3 2 2 1 2 20696 16241 1731;1787 15596 37830;37831 43870;43871;43872 43872 3 QITSYGETCPGLEQYAIK Unmodified 2056.9776 0.97755658 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 9.5 3.5 1 1 67.964 67.964 3 1.8269E-07 23889 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.482 57.428 98.845 54.026 112.81 104.06 37.491 59.696 93 56 112 102 37 56 2 1 2 2 1 1 12075 16242 1543 15597 37832;37833 43873;43874 43873 2 QITVNDLPVGR Deamidation (N) 1211.651 0.65100113 2116 Q61171 Prdx2 Peroxiredoxin-2 yes yes 0 1 0 0 5 0 1 59.654 59.654 2 0.0007358 20638 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.522 74.396 29.749 27.345 26.382 47.67 55.086 37.87 28 28 28 46 56 37 1 1 1 1 1 1 4970.6 16243 2116 15598 37834 43875 43875 822 1 QITVNDLPVGR Unmodified 1210.667 0.66698555 2116 Q61171 Prdx2 Peroxiredoxin-2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 58.908 58.908 2;3 2.8007E-16 19621 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 166.87 104.33 326.37 245.26 123.1 269.73 357.15 295.75 306 250 130 259 363 287 3 2 1 2 3 3 79604 16244 2116 15598 37835;37836;37837;37838 43876;43877;43878;43879 43876 4 QIVAGTNLFIK Unmodified 1202.7023 0.70230842 2158 Q62426 Cstb Cystatin-B yes yes 0 0 0 0 11 0 1 71.081 71.081 2 1.7775E-21 20577 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 179.57 93.103 54.441 55.913 0 0 106.69 0 51 56 0 0 102 0 1 1 0 0 1 0 10983 16245 2158 15599 37839 43880 43880 1 QIVEILTAYASAVGIGTTQVQQE Unmodified 2418.2642 0.26421978 2517 Q8CAQ8;E9Q800 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8.33 5.22 2 1 2 1 115.8 115.8 3 1.1301E-18 30998 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.67 102.63 6.438 11.512 2.164 2.186 17.102 15.761 6 11 2 2 17 15 1 3 1 1 4 4 36605 16246 2517 15600 37840;37841;37842;37843;37844;37845 43881;43882;43883;43884;43885;43886;43887;43888;43889 43887 9 QIVLTGILEQVVNCR Unmodified 1740.9556 0.95563935 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 11.5 0.5 1 1 89.913 89.913 2 0.00013999 28820 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.881 37.922 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 7129.9 16247 3174 15601 37846;37847 43890;43891 43890 2 QIVVNLLGSK Unmodified 1069.6495 0.64954457 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 9 4.64 1 1 2 72.67 72.67 2 1.369E-05 18721 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.75 64.245 118.39 22.186 100.91 92.13 18.032 0 111 23 97 88 19 0 3 1 2 2 1 0 43041 16248 927 15602 37848;37849;37850;37851 43892;43893;43894;43895 43895 4 QIVWNGPVGVFEWEAFAR Deamidation (N) 2105.0371 0.037060793 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 1 0 0 9.33 2.62 1 1 1 97.456 97.456 3 5.7514E-07 35872 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.848 69.684 20.387 0 0 9.2154 60.35 57.851 19 0 0 9 60 55 1 0 0 1 2 1 20960 16249 1334 15603 37852;37853;37854 43896;43897;43898 43896 409 3 QIVWNGPVGVFEWEAFAR Unmodified 2104.053 0.053045209 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 9.33 1.25 1 1 1 95.684 95.684 2;3 7.5302E-07 34531 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.97 60.03 5.3097 39.235 17.256 9.2829 0 29.848 5 37 18 9 0 28 1 2 2 1 0 2 9226.9 16250 1334 15603 37855;37856;37857 43899;43900;43901 43899 3 QIWQNLGLDEAR Unmodified 1441.7314 0.73137672 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 0 1 70.466 70.466 2 0.0050971 23567 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.598 30.788 30.044 0 0 20.265 26.699 48.274 28 0 0 19 28 46 1 0 0 1 1 1 2865.1 16251 2382 15604 37858 43902 43902 1 QIWQQYFSAK Unmodified 1297.6455 0.64552182 1120 H3BJP9;H3BK16;V9GX21;H3BLL2;Q811I0 Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 yes no 0 0 0 0 11 0 1 72.458 72.458 2 3.1031E-05 21204 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.827 40.829 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16252 1120 15605 37859 43903 43903 1 QIWTLEQPPDEAGSAAVCLR Unmodified 2240.0896 0.089566649 2131 Q61553;A0A0G2JDU7 Fscn1 Fascin yes no 0 0 0 0 6 0 1 73.784 73.784 3 0.00025248 26603 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.326 35.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16253 2131 15606 37860 43904 43904 1 QIYPPINVLPSLSR Unmodified 1595.9035 0.90352742 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 11 1.29 1 1 2 1 1 79.431 79.431 2;3 2.0391E-29 24687 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.33 101.61 66.091 107.37 236.64 206.58 254.43 145.55 65 102 223 195 250 139 2 3 5 4 5 3 171090 16254 1741 15607 37861;37862;37863;37864;37865;37866 43905;43906;43907;43908;43909;43910;43911;43912;43913;43914 43907 10 QKDYETATLSEIK Unmodified 1524.7672 0.7671531 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 5.67 0.471 1 2 56.477 56.477 3;4 5.1934E-07 18385 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.77 60.212 177.43 220.52 222.81 214.84 249.32 134.42 167 222 223 213 250 130 2 3 2 3 2 1 13432 16255 418 15608 37867;37868;37869 43915;43916;43917 43917 3 QKEPFVFASVR Unmodified 1306.7034 0.70337105 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 1 10.5 2.5 1 1 56.483 56.483 3 0.023332 17160 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.569 36.236 0 253.78 158.26 228.98 283.21 218.98 0 241 158 223 288 213 0 2 1 2 2 2 44304 16256 3355 15609 37870;37871 43918;43919 43918 2 QKEVNENFAIDLIAQQPVNEVEHR Unmodified 2819.4202 0.42021992 1610 P52503;A0A1Y7VM38;A0A1Y7VKP8 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 1 5 0 1 69.201 69.201 4 1.7473E-06 25015 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.865 45.479 0 0 30.296 0 48.116 0 0 0 28 0 46 0 0 0 1 0 1 0 7202.7 16257 1610 15610 37872 43920 43920 1 QKFDNLYCCR Unmodified 1402.6122 0.61218956 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 1 8 0 1 49.506 49.506 3 0.0073094 13653 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.056 46.384 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16258 2298;1040 15611 37873 43921 43921 1 QKGSEENLDETR Unmodified 1404.6481 0.6481006 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 1 4.5 0.5 1 1 33.37 33.37 3 0.00020077 8371 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.001 48.214 39.564 66.062 25.762 49.327 84.3 37.808 37 65 28 47 84 37 1 2 1 1 2 1 4074.6 16259 3276 15612 37874;37875 43922;43923 43922 2 QKLPDGSEIPLPPILLGK Unmodified 1914.119 0.11899951 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 1 9.5 0.5 1 1 83.998 83.998 3;4 0.00028871 29118 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.173 49.219 39.613 46.86 28.537 14.792 27.097 43.999 37 47 28 14 28 42 1 2 1 1 1 1 5490.8 16260 3038 15613 37876;37877 43924;43925 43924 2 QKPITPETAEK Unmodified 1240.6663 0.66631685 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 1 8 2.92 2 1 1 42.103 42.103 3;4 0.0013871 11769 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.069 56.092 396.18 338.93 467.9 189.81 359.29 407.47 373 351 456 185 352 389 3 4 3 1 3 3 44821 16261 1676 15614 37878;37879;37880;37881 43926;43927;43928;43929 43927 4 QKPPIIHR Unmodified 987.59778 0.59778377 171 A0A0R4J0F6;Q99KY4 Gak Cyclin-G-associated kinase yes no 0 0 0 1 9 0 1 33.436 33.436 4 0.0075783 6059 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.38 30.298 0 29.024 45.913 47.542 0 34.112 0 28 46 46 0 32 0 1 1 1 0 1 2881.6 16262 171 15615 37882 43930 43930 1 QKPVLQK Unmodified 839.52289 0.52288749 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 1 10 0 1 42.087 42.087 3 0.063356 8588 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.76 33.018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16263 2074 15616 37883 43931 43931 1 QKWLLLTGISAQQNR Unmodified 1754.9792 0.97915198 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 1 0 1 71.446 71.446 3 0.0038853 24159 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.42 35.676 14.925 19.21 0 30.178 22.672 0 14 19 0 28 23 0 1 1 0 1 1 0 2218.2 16264 2185 15617 37884 43932 43932 1 QLAAEEEQR Unmodified 1072.5149 0.51490158 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0 1 33.934 33.934 2 0.0013008 8938 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 103.7 58.619 0 48.944 0 49.294 52.299 116.83 0 46 0 46 56 111 0 1 0 1 1 1 4895.5 16265 3266 15618 37885 43933 43933 1 QLADHLGFEFFEASAK Unmodified 1808.8733 0.87334951 1761 P63011 Rab3a Ras-related protein Rab-3A yes yes 0 0 0 0 7.83 2.41 2 2 1 1 77.988 77.988 3;4 8.4018E-18 29638 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 132.64 102.1 295.88 351.17 443.84 269.49 287.03 504.56 278 352 436 268 297 481 4 5 6 3 4 6 118400 16266 1761 15619 37886;37887;37888;37889;37890;37891 43934;43935;43936;43937;43938;43939;43940 43940 7 QLAEEDAAR Unmodified 1001.4778 0.47778779 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0.816 1 1 1 34.5 34.5 2 0.00018232 9241 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 131.22 39.358 79.132 115.94 175.18 153.01 100.07 184.76 74 111 175 148 102 176 1 2 3 2 2 3 19369 16267 3266 15620 37892;37893;37894 43941;43942;43943 43942 3 QLAEEDLAQQR Unmodified 1299.6419 0.64189301 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3 0 1 46.054 46.054 2 0.0011952 14857 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.155 49.862 20.184 18.546 18.483 19.308 18.987 0 19 19 19 19 19 0 1 1 1 1 1 0 2633.2 16268 3266 15621 37895 43944 43944 1 QLAEGTAQQR Unmodified 1100.5574 0.5574351 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 30.941 30.941 2 0.023811 7479 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.699 28.129 0 14.896 0 0 29.134 4.4987 0 14 0 0 28 5 0 1 0 0 1 1 8396 16269 3266 15622 37896 43945 43945 1 QLAELETEDGL Unmodified 1216.5823 0.58231245 3393 Q9Z2D0 Mtmr9 Myotubularin-related protein 9 yes yes 0 0 0 0 2 0 1 74.217 74.217 2 0.00088862 26922 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.629 57.789 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 1399.9 16270 3393 15623 37897 43946 43946 1 QLALWNPK Unmodified 968.54435 0.54435122 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 10.8 1.33 1 1 2 1 65.957 65.957 2;3 0.0031167 18649 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.83 66.158 176.13 270.96 392.16 180.89 164.54 280.99 166 270 380 176 167 268 3 4 4 3 2 3 54199 16271 3336 15624 37898;37899;37900;37901;37902 43947;43948;43949;43950;43951 43948 5 QLANQTVGR Unmodified 985.53049 0.53049207 2060 Q5SSM3;A0A0U1RPK6;A0A0U1RNM6;E9QAJ9;Q3UIA2 Arhgap44;Arhgap17 Rho GTPase-activating protein 44;Rho GTPase-activating protein 17 yes no 0 0 0 0 6 0 1 34.822 34.822 2 0.0062742 8216 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.787 36.652 49.358 0 0 20.252 27.359 29.067 46 0 0 19 28 28 1 0 0 1 1 1 1995.1 16272 2060 15625 37903 43952 43952 1 QLAQYHAK Unmodified 957.50321 0.50321468 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 8 0 1 36.642 36.642 3 0.002124 7730 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.909 57.134 69.139 43.19 65.324 46.385 0 0 65 46 65 46 0 0 1 1 1 1 0 0 5035.4 16273 2697 15626 37904 43953 43953 1 QLCDNAGFDATNILNK Deamidation (N) 1793.8254 0.82541304 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 1 0 0 6 0 1 72.059 72.059 3 0.016032 25774 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.754 23.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16274 1822 15627 37905 43954 43954 740 1 QLDALLEALK Unmodified 1112.6441 0.64412484 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 9 0 1 88.193 88.193 3 0.0053081 31090 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.836 25.23 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 993.52 16275 2123 15628 37906 43955 43955 1 QLDEANALLR Unmodified 1141.6091 0.60913632 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 5 0 1 58.44 58.44 2 0.006057 19984 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.781 31.183 29.904 27.776 0 30.604 0 0 28 28 0 28 0 0 1 1 0 1 0 0 2741.7 16276 347 15629 37907 43956 43956 1 QLDEASGANDEIVQLR Unmodified 1756.8592 0.85915601 676 F6SBR5;D3Z1U0;E9QL53;D3YU89;P49025 Cit Citron Rho-interacting kinase yes no 0 0 0 0 3 0 1 59.685 59.685 3 0.0011798 21188 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.089 33.6 40.6 0 29.244 19.024 0 29.848 38 0 28 19 0 28 1 0 1 1 0 1 1642.6 16277 676 15630 37908 43957 43957 1 QLDSGLLLVTGPLVINR Unmodified 1807.0567 0.056733603 1570 P47911 Rpl6 60S ribosomal protein L6 yes yes 0 0 0 0 9 0 1 88.585 88.585 3 0.00043294 31221 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.589 9.6163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16278 1570 15631 37909 43958 43958 1 QLEAHNR Unmodified 866.43586 0.4358634 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 7 3.54 1 1 1 1 20.097 20.097 3 0.0029263 2837 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.89 76.73 49.221 56.916 0 47.259 82.004 94.666 46 56 0 44 83 91 2 2 0 3 3 4 10042 16279 1415 15632 37910;37911;37912;37913 43959;43960;43961;43962 43959 4 QLEALGLAEKPQLVTR Unmodified 1765.0098 0.0097834104 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 1 8 0.816 1 1 1 66.551 66.551 3 2.5654E-33 21671 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.62 83.4 78.637 129.85 189.52 55.198 160.74 58.154 74 130 185 56 158 56 1 2 2 1 2 1 16001 16280 927 15633 37914;37915;37916 43963;43964;43965 43964 3 QLEAQLEEK Unmodified 1086.5557 0.55570376 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 4 0 1 53.485 53.485 2 0.021516 17969 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.694 28.891 0 0 0 30.098 26.907 29.08 0 0 0 28 28 28 0 0 0 1 1 1 2483.8 16281 1669 15634 37917 43966 43966 1 QLEDGDQPDSK Unmodified 1230.5364 0.53642488 1952 Q3U0V1 Khsrp Far upstream element-binding protein 2 yes yes 0 0 0 0 2 0 2 40.868 40.868 2;3 0.0076344 12244 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.353 35.415 48.276 26.323 49.077 0 46.807 38.106 46 28 47 0 46 37 2 1 1 0 1 1 3514.4 16282 1952 15635 37918;37919 43967;43968 43968 2 QLEDLVIEAVYADVLR Unmodified 1844.9884 0.98837927 2997 Q9CZ04;D3Z440;D3YVI6 Cops7a COP9 signalosome complex subunit 7a yes no 0 0 0 0 6 0 1 108.55 108.55 3 0.00021127 38006 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.175 44.335 0 5.2411 4.7186 8.4628 0 5.33 0 5 5 8 0 5 0 1 1 1 0 1 1061.1 16283 2997 15636 37920 43969 43969 1 QLEDNIQR Unmodified 1014.5094 0.50942227 1012;2447 F7AA26;Q8BR92;G3X9P1 Pakap;Palm2 Paralemmin-2 no no 0 0 0 0 3.5 0.5 1 1 39.39 39.39 2 0.018629 11255 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.059 16.09 0 44.688 0 0 0 29.848 0 42 0 0 0 28 0 1 0 0 0 1 3801.9 16284 1012;2447 15637 37921;37922 43970;43971 43971 2 QLEEQNAR Unmodified 986.47812 0.47812214 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 3 0 1 28.876 28.876 2 1.6974E-60 6850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 182.53 112.01 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16285 895 15638 37923 43972 43972 1 QLEESQDSLSEELAK Unmodified 1704.8054 0.8053891 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 3 0.816 1 1 1 62.572 62.572 3 1.0441E-05 22360 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.69 58.923 59.858 38.738 76.333 38.139 29.288 78.884 56 37 74 37 28 74 2 1 2 2 1 2 11996 16286 1481 15639 37924;37925;37926 43973;43974;43975 43974 3 QLEESVDSLGEELVQLR Unmodified 1942.9848 0.98475045 2139 Q61768 Kif5b Kinesin-1 heavy chain yes yes 0 0 0 0 4 0 1 86.765 86.765 3 0.0019506 32980 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.221 33.529 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1662.7 16287 2139 15640 37927 43976 43976 1 QLEITGR Unmodified 815.45012 0.45011648 1696;1197 P61264;A0A0U1RNT8;Q3TJ55;Q80W45;Q00262;O35526;D6RFB9;A0A0J9YUA0 Stx1b;Stx2;Stx1a Syntaxin-1B;Syntaxin-2;Syntaxin-1A no no 0 0 0 0 5.5 0.5 1 1 43.293 43.293 2 0.0088687 12730 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.5 20.457 675.86 537.31 648.04 683.26 902.88 634.09 636 558 660 676 914 619 2 2 2 2 2 2 84514 16288 1696;1197 15641 37928;37929 43977;43978 43977 2 QLELACETQEEVDSWK Unmodified 1963.8833 0.88332185 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 6.2 3.54 1 1 1 1 1 74.568 74.568 3 2.9346E-18 27480 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.71 107.42 129.33 119.21 115.57 146.59 146.72 243.13 121 121 111 139 148 232 2 3 2 2 3 4 61798 16289 118;1534 15642 37930;37931;37932;37933;37934 43979;43980;43981;43982;43983 43980 5 QLELDLNDER Unmodified 1243.6044 0.60444487 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 3.5 0.5 1 1 59.371 59.371 2 0.0010646 20976 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.866 36.083 69.385 0 60.491 29.94 74.013 58.688 65 0 56 28 74 56 2 0 1 1 2 1 8806 16290 728 15643 37935;37936 43984;43985 43984 2 QLENLEQQKYDDEDISEDIK Unmodified 2451.1289 0.12890809 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 1 3.33 0.471 2 1 65.876 65.876 3;4 2.5232E-08 23470 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.698 53.693 88.096 81.891 162.73 64.371 130.01 87.774 83 84 158 65 130 84 2 2 3 2 3 2 23767 16291 65 15644 37937;37938;37939 43986;43987;43988 43988 3 QLENVLDDLDPESATLPAGFR Unmodified 2299.1332 0.1332056 3232 Q9JKK7;A0A1L1SU70;A0A1L1SRR7 Tmod2 Tropomodulin-2 yes no 0 0 0 0 4.67 0.471 1 2 90.024 90.024 3;4 1.3619E-08 33760 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.917 58.961 12.799 0 12.919 0 9.2034 6.1334 12 0 12 0 9 6 1 0 1 0 1 1 7557.2 16292 3232 15645 37940;37941;37942 43989;43990;43991 43989 3 QLEVEPEGLEPEAEK Unmodified 1695.8203 0.82031089 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 63.096 63.096 3 2.3635E-05 22610 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.428 63.015 50.252 0 30.145 30.604 56.948 47.411 47 0 28 28 56 46 2 0 1 1 1 1 8413.1 16293 2539 15646 37943;37944 43992;43993 43993 2 QLFALSCAAEEQGMLPEDLSGVIR Unmodified 2633.2829 0.28292308 1330 P08752;A0A0A6YWA9 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes no 0 0 0 0 13 0 1 91.396 91.396 3 0.0048468 36375 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.125 19.815 0 29.792 0 20.767 0 0 0 28 0 19 0 0 0 1 0 1 0 0 2430.2 16294 1330 15647 37945 43994 43994 1 QLFCWLDK Unmodified 1108.5376 0.53755128 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 11.3 1.25 1 1 1 80.778 80.778 2 0.010281 25419 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.033 0 118.11 78.67 100.35 170.51 0 128.99 111 83 102 167 0 121 2 2 2 3 0 2 39882 16295 1148 15648 37946;37947;37948 43995;43996;43997 43995 3 QLFDQVVK Unmodified 975.53893 0.53893149 1451;1452;1453 P26043;Q7TSG6;P26041;P26040 Rdx;Msn;Ezr Radixin;Moesin;Ezrin no no 0 0 0 0 7 0 1 64.453 64.453 3 0.032736 21308 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.796 19.053 49.072 0 48.007 58.347 0 0 46 0 47 56 0 0 1 0 1 1 0 0 2162 16296 1453;1452;1451 15649 37949 43998 43998 1 QLFHPEQLITGK Unmodified 1409.7667 0.76669959 1313;1794;44;3223 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;A0A087WSB0;A0A087WSL5;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 9.93 2.05 2 3 1 2 2 2 2 65.705 65.705 2;3;4 2.261E-15 21441 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 139.19 111.54 6062 4498.6 5514 4911.4 7232.9 5923.9 5701 4688 5535 4893 7302 5749 18 17 14 16 15 17 2707700 16297 44;1313;1794;3223 15650 37950;37951;37952;37953;37954;37955;37956;37957;37958;37959;37960;37961;37962;37963 43999;44000;44001;44002;44003;44004;44005;44006;44007;44008;44009;44010;44011;44012;44013;44014;44015;44016;44017;44018;44019 44005 21 QLFHPEQLITGKEDAANNYAR Unmodified 2414.1979 0.19787154 1313;1794;44;3223 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 1 8.5 2.22 1 1 2 1 1 63.709 63.709 3;4 3.032E-13 21075 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.22 92.143 539.94 660.61 597.44 1263.4 670.21 1134.5 505 642 593 1200 711 1079 4 5 3 8 5 6 413830 16298 44;1313;1794;3223 15651 37964;37965;37966;37967;37968;37969 44020;44021;44022;44023;44024;44025;44026;44027 44021 8 QLFHPEQLITGKEDAANNYAR Deamidation (N) 2415.1819 0.18188713 1313;1794;44;3223 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;P05213;A0A2R8VHF3;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 1 9.5 3.5 1 1 64.593 64.593 4 1.0283E-10 22483 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.36 67.746 108.14 286.36 127.74 340.86 358.71 216.04 102 278 130 325 365 208 1 2 1 2 2 1 39809 16299 44;1313;1794;3223 15651 37970;37971 44028;44029 44028 10;11 2 QLGETLTELK Unmodified 1130.6183 0.61830402 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 6 0 1 65.753 65.753 2 0.0060997 22734 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.666 17.103 29.807 0 39.884 0 46.807 38.106 28 0 37 0 46 37 1 0 1 0 1 1 2882 16300 573 15652 37972 44030 44030 1 QLHDDYFYHDEL Unmodified 1593.6736 0.67358707 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 0 3 0 1 59.191 59.191 3 0.056838 20902 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 37.998 28.428 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16301 2442 15653 37973 44031 44031 1 QLHDEAR Unmodified 867.41988 0.41987898 2182 Q64727;A0A286YDJ4 Vcl Vinculin yes no 0 0 0 0 3 0 1 20.939 20.939 3 0.0058382 3380 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.472 50.592 39.474 17.159 23.657 0 0 20.254 37 19 23 0 0 19 1 1 1 0 0 1 2731.3 16302 2182 15654 37974 44032 44032 1 QLICDPSYIPDR Unmodified 1475.7079 0.70786408 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 7 2.77 2 2 1 1 60.872 60.872 2;3 2.8101E-12 20453 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.6 87.906 114.18 99.468 109.22 72.526 221.45 94.464 107 98 106 69 218 92 3 3 3 2 5 3 87770 16303 1595 15655 37975;37976;37977;37978;37979;37980 44033;44034;44035;44036;44037;44038 44036 6 QLICDPSYVK Unmodified 1221.6064 0.60635913 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 10 3 1 1 58.655 58.655 3 5.3886E-06 18780 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.456 72.07 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16304 2132 15656 37981;37982 44039;44040 44039 2 QLIMANPQMQQLIQR Unmodified 1810.9546 0.95459349 3295;2657 Q8R317;Q9QZM0 Ubqln1;Ubqln2 Ubiquilin-1;Ubiquilin-2 no no 0 0 0 0 10.5 0.5 1 1 71.338 71.338 2;3 0.0034536 21318 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.548 33.63 68.547 121.41 98.467 95.78 0 78.884 65 120 102 93 0 74 1 1 1 1 0 1 7780.6 16305 2657;3295 15657 37983;37984 44041;44042 44041 2 QLITDLVISK Unmodified 1128.6754 0.67542497 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 10 1.51 1 2 2 1 1 76.869 76.869 2;3 9.7715E-10 29176 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.36 89.438 504.06 716.18 369.78 864.76 602.71 883.29 473 707 363 814 615 842 6 8 4 8 6 7 406430 16306 2173 15658 37985;37986;37987;37988;37989;37990;37991 44043;44044;44045;44046;44047;44048;44049;44050;44051;44052 44052 10 QLIVELVVNK Unmodified 1153.7071 0.70705945 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 10.5 0.957 1 2 2 1 80.568 80.568 2;3 2.9163E-05 24792 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.88 75.442 88.637 152.27 113.44 157.25 160.67 171 83 149 111 149 158 167 2 4 2 3 2 4 89669 16307 1282 15659 37992;37993;37994;37995;37996;37997 44053;44054;44055;44056;44057;44058;44059;44060 44056 8 QLIVGVNK Unmodified 869.53345 0.53345218 1729;1341 P10126;D3Z3I8;D3YZ68;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 9.14 3.68 1 1 1 1 1 1 1 56.653 56.653 2 0.0012879 16285 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 141.78 56.718 752.8 473.15 1106.8 715.34 1434.5 1285.6 706 488 1057 703 1438 1234 5 5 6 6 8 7 245160 16308 1341;1729 15660 37998;37999;38000;38001;38002;38003;38004 44061;44062;44063;44064;44065;44066;44067;44068;44069 44063 9 QLIVPSEQGGALSR Unmodified 1453.7889 0.7888916 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 7 0 1 56.509 56.509 2 0.0079223 17619 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.401 11.051 0 20.216 0 30.604 0 29.848 0 19 0 28 0 28 0 1 0 1 0 1 2303.4 16309 3249 15661 38005 44070 44070 1 QLLIQQK Unmodified 869.53345 0.53345218 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 10 0 1 53.257 53.257 2 0.028293 13005 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.297 17.811 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16310 2424 15662 38006 44071 44071 1 QLLLTADDR Unmodified 1043.5611 0.56112349 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 55.213 55.213 2 5.3884E-73 17853 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 232.75 143.8 1604.4 1259.9 1390.9 1732.9 2074.8 1888.4 1508 1279 1395 1697 2114 1827 7 7 5 8 6 7 500560 16311 1309 15663 38007;38008;38009;38010;38011 44072;44073;44074;44075;44076;44077;44078;44079 44073 8 QLLMLQSLE Unmodified 1073.5791 0.57908174 1732 P62743;A0A0U1RQ06 Ap2s1 AP-2 complex subunit sigma yes no 0 0 0 0 8.5 0.5 1 1 87.77 87.77 2 0.0086816 30880 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.058 26.938 0 58.325 75.302 28.432 0 0 0 56 74 28 0 0 0 2 2 1 0 0 15334 16312 1732 15664 38012;38013 44080;44081 44081 2 QLLNCLHIITLYNR Unmodified 1769.9611 0.96105908 2555;3331 Q8CI94;Q9WUB3;E9PUM3 Pygb;Pygm Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase no no 0 0 0 0 6.5 5.5 1 1 75.056 75.056 3 9.856E-05 25910 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.291 59.75 36.482 19.907 18.488 19.665 0 62.894 34 19 19 19 0 59 1 1 1 1 0 2 19531 16313 2555;3331 15665 38014;38015 44082;44083 44082 2 QLLQANPILEAFGNAK Unmodified 1725.9414 0.94136949 2696;1149;391 Q8VDD5;A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q6URW6;K3W4R2 Myh9;Myh11;Myh14 Myosin-9;Myosin-11;Myosin-14 no no 0 0 0 0 10.8 1.48 1 1 1 1 87.573 87.573 3 2.2693E-05 28189 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.673 74.475 109.03 54.188 47.519 70.007 28.291 78.077 102 56 47 65 28 74 3 2 2 2 1 2 17660 16314 2696;391;1149 15666 38016;38017;38018;38019 44084;44085;44086;44087 44085 4 QLLTLSNELSQAR Unmodified 1471.7995 0.79945628 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 8.5 0.5 1 1 68.934 68.934 3 0.0015214 22101 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.338 35.864 60.088 0 0 109.05 129.68 37.59 56 0 0 102 130 37 1 0 0 2 2 1 8867.5 16315 1451 15667 38020;38021 44088;44089 44089 2 QLLWGPALLITPVLEPGK Unmodified 1944.1448 0.14482033 1821 P70699 Gaa Lysosomal alpha-glucosidase yes yes 0 0 0 0 11.7 0.471 1 2 102.67 102.67 3;4 5.8292E-08 28858 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.489 63.307 25.66 6.7991 30.215 0 14.644 55.432 24 7 28 0 14 52 2 1 2 0 1 2 9120.9 16316 1821 15668 38022;38023;38024 44090;44091;44092 44091 3 QLLWGPALLITPVLEPGKTEVTGYFPK Unmodified 2966.6521 0.65211734 1821 P70699 Gaa Lysosomal alpha-glucosidase yes yes 0 0 0 1 11 0 1 100.23 100.23 4 4.9456E-05 33090 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.745 41.904 5.1762 14.218 19.679 0 0 0 5 14 19 0 0 0 1 1 1 0 0 0 2141.4 16317 1821 15669 38025 44093 44093 1 QLMALAGK Unmodified 830.46841 0.46840908 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 10 0 1 61.091 61.091 2 0.0056003 16575 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.01 46.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16318 860 15670 38026 44094 44094 1 QLMHNGHPSEK Unmodified 1276.5983 0.59825406 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 34.725 34.725 4 0.041318 8586 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.634 18.872 59.439 54.525 62.885 86.971 0 78.884 56 56 65 83 0 74 1 1 1 1 0 1 2300.7 16319 2148 15671 38027 44095 44095 1 QLMVHAFIK Unmodified 1085.6056 0.60557126 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 0 11 0 1 59.294 59.294 2 0.00051474 15390 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.92 48.537 34.336 0 0 25.139 0 0 32 0 0 23 0 0 1 0 0 1 0 0 3591.7 16320 1500 15672 38028 44096 44096 1 QLNENQVR Unmodified 999.50976 0.50975662 1731 P62715 Ppp2cb Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform yes yes 0 0 0 0 4.5 0.5 1 1 33.053 33.053 2 0.040516 7766 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.494 33.943 49.063 0 49.525 0 19 39.442 46 0 46 0 19 37 1 0 1 0 1 1 9610.1 16321 1731 15673 38029;38030 44097;44098 44098 2 QLNTIQNAEAVHFFCNYEESR Unmodified 2569.1656 0.16558514 1702 P61922;Q3TUE8;F7C9G3 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 68.487 68.487 3 3.0664E-23 24704 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.98 126.98 59.938 7.2405 19.129 39.701 36.843 28.797 56 9 19 38 37 28 2 1 1 2 1 1 12775 16322 1702 15674 38031;38032 44099;44100 44099 2 QLPAAILYQK Unmodified 1143.6652 0.66519463 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 10 0 1 68.649 68.649 2 0.0060015 19906 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.931 40.381 0 38.44 55.524 37.706 27.556 0 0 37 55 38 28 0 0 1 1 1 1 0 2536.5 16323 3285 15675 38033 44101 44101 1 QLPLVKPYLR Unmodified 1225.7547 0.75467834 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 9.6 4.36 1 2 1 1 61.568 61.568 2;3 1.3568E-05 14805 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 127.4 85.693 2962 2942.8 3914.2 3751.2 436.33 787.34 2792 3015 3897 3653 452 747 2 8 5 8 3 4 814120 16324 2185 15676 38034;38035;38036;38037;38038 44102;44103;44104;44105;44106;44107;44108;44109 44108 8 QLPPLGPTNPR Unmodified 1188.6615 0.66150624 992 F6SEU4;A0A338P799;A0A140T8K9 Syngap1 Ras/Rap GTPase-activating protein SynGAP yes no 0 0 0 0 8 0 1 52.281 52.281 2 0.0048777 14942 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.347 20.9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16325 992 15677 38039 44110 44110 1 QLPSAGADK Unmodified 885.4556 0.45559579 1678 P60840 Ensa Alpha-endosulfine yes yes 0 0 0 0 6.5 0.5 1 1 43.225 43.225 2 0.0051699 12243 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.509 30.817 48.95 0 68.502 35.484 46.486 0 46 0 65 37 46 0 1 0 1 1 1 0 4802 16326 1678 15678 38040;38041 44111;44112 44111 2 QLPTLILFQGGK Unmodified 1313.7707 0.77072234 758 D3Z2J6;Q9D710 Tmx2 Thioredoxin-related transmembrane protein 2 yes no 0 0 0 0 11 0 1 82.583 82.583 3 1.4061E-05 25844 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.401 55.399 0 48.944 0 80.882 0 49.036 0 46 0 74 0 46 0 1 0 1 0 1 7111.1 16327 758 15679 38042 44113 44113 1 QLQALTCDLESLR Unmodified 1545.7821 0.78209166 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 77.193 77.193 2;3 5.1822E-27 28242 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 172.74 116.19 78.771 170.28 81.64 84.444 133.05 88.478 74 168 83 84 130 83 2 5 2 3 2 2 32080 16328 1304 15680 38043;38044;38045;38046;38047;38048 44114;44115;44116;44117;44118;44119 44116 6 QLQDLTEEK Unmodified 1102.5506 0.55061839 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 9 4 1 1 54.856 54.856 2 0.012814 18364 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.113 22.032 0 29.792 0 49.593 36.424 0 0 28 0 46 37 0 0 1 0 1 1 0 2663.7 16329 2249 15681 38049;38050 44120;44121 44121 2 QLQEDAAR Unmodified 929.45666 0.45665842 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5.4 3.93 1 1 1 1 1 31.149 31.149 2 2.6352E-43 7964 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 209.84 103.42 271.42 276.03 405.61 13.545 260.86 412.04 255 283 392 14 257 393 1 4 4 1 2 3 92227 16330 2148 15682 38051;38052;38053;38054;38055 44122;44123;44124;44125;44126 44123 5 QLQEEDR Unmodified 916.42502 0.42502394 1997 Q3UMR5 Mcu Calcium uniporter protein, mitochondrial yes yes 0 0 0 0 1 0 1 28.983 28.983 2 0.011814 6236 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.17 7.3576 0 0 39.213 18.43 0 20.254 0 0 37 19 0 19 0 0 1 1 0 1 14693 16331 1997 15683 38056 44127 44127 1 QLQEETSPDGIMTEALPPAR Unmodified 2182.0576 0.057597819 2932 Q9CQJ8 Ndufb9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 yes yes 0 0 0 0 3.5 0.5 1 1 67.667 67.667 3 1.2797E-10 24788 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.176 74.749 0 0 0 12.901 30.421 15.664 0 0 0 12 31 15 0 0 0 1 2 1 10032 16332 2932 15684 38057;38058 44128;44129 44128 2 QLQELEDK Unmodified 1001.5029 0.50293991 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 7.33 4.03 1 1 1 53.119 53.119 2;3 0.008459 17761 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.435 0 99.238 41.289 118.21 0 143.11 66.579 93 46 112 0 139 65 1 1 2 0 2 1 9242.2 16333 1329 15685 38059;38060;38061 44130;44131;44132 44130 3 QLQLELK Unmodified 870.51747 0.51746776 2393 Q8BH44 Coro2b Coronin-2B yes yes 0 0 0 0 7 0 1 62.26 62.26 2 0.024931 20288 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.452 19.906 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16334 2393 15686 38062 44133 44133 1 QLQSEQPQTAAAR Unmodified 1426.7165 0.71645494 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 6.25 3.96 1 1 1 1 35.013 35.013 2 1.1158E-18 9258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.93 120.76 40.679 18.848 0 45.037 46.222 48.783 38 19 0 42 46 47 2 1 0 2 1 2 8889.8 16335 65 15687 38063;38064;38065;38066 44134;44135;44136;44137 44135 4 QLQSPLPLPTTLPLLSASIASTK Unmodified 2375.3676 0.36756264 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7.4 5.24 2 1 2 96.955 96.955 3;4 7.1115E-10 33546 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.152 53.009 24.402 82.923 32.987 29.468 25.84 99.646 23 80 33 28 25 94 2 5 2 2 2 4 23320 16336 570 15688 38067;38068;38069;38070;38071 44138;44139;44140;44141;44142;44143 44139 6 QLSAFGEYVAEILPK Unmodified 1663.8821 0.88212328 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 9.2 2.04 1 1 2 1 92.252 92.252 2;3 1.4849E-11 36699 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.13 87.716 29.865 42.56 120.26 17.371 145.22 53.553 28 40 112 18 140 51 1 2 4 2 4 2 30207 16337 3152 15689 38072;38073;38074;38075;38076 44144;44145;44146;44147;44148;44149 44149 6 QLSALGFVIPAK Unmodified 1242.7336 0.73360855 734 D3Z025;Q45VK7 Dync2h1 Cytoplasmic dynein 2 heavy chain 1 yes no 0 0 0 0 8 0 1 34.747 34.747 4 0.042397 6873 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.847 10.908 187.82 204.39 0 183.95 447.49 368.86 176 204 0 176 448 358 1 1 0 1 1 1 11550 16338 734 15690 38077 44150 44150 1 QLSALHR Unmodified 823.46644 0.46643525 3004 Q9CZM2;B8JKK2 Rpl15 60S ribosomal protein L15;Ribosomal protein L15 yes no 0 0 0 0 7 0 1 33.644 33.644 3 0.029606 6899 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.286 16.394 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 2129.1 16339 3004 15691 38078 44151 44151 1 QLSDIEER Unmodified 988.48254 0.48253882 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 5.5 4.39 1 1 1 1 44.014 44.014 2 2.5408E-06 13946 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 163.32 53.605 283.82 356.85 485.6 512.39 391.01 441.89 266 361 491 502 408 425 2 4 4 4 3 3 123380 16340 154 15692 38079;38080;38081;38082 44152;44153;44154;44155 44153 4 QLSESQVK Unmodified 917.48181 0.48181054 1787 P63330 Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform yes yes 0 0 0 0 7.75 3.11 1 1 1 1 41.27 41.27 2;3 0.0014055 11864 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.639 35.852 158.61 119.84 110.69 195.19 127.36 95.504 149 120 111 186 129 93 3 2 1 2 2 2 16844 16341 1787 15693 38083;38084;38085;38086 44156;44157;44158;44159 44156 4 QLSIALPQEFAALTK Unmodified 1628.9138 0.91375776 1669 P60469 Ppfia3 Liprin-alpha-3 yes yes 0 0 0 0 9 0 1 87.067 87.067 3 0.00067714 30575 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.209 46.493 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 4404.4 16342 1669 15694 38087 44160 44160 1 QLSLPLQEAQK Unmodified 1253.698 0.69795133 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 7.5 0.5 1 1 63.698 63.698 3 1.307E-10 20981 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.7 106.64 81.864 128.92 232.37 211.51 221.76 234.59 77 130 231 210 229 226 1 2 2 2 2 2 30262 16343 1400 15695 38088;38089 44161;44162 44161 2 QLSNPQQEVQNIFK Unmodified 1671.858 0.8580338 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.67 3.09 1 1 1 69.908 69.908 3 4.5292E-05 25730 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.632 55.22 59.791 101.98 220.81 72.628 98.363 194.4 56 102 213 74 102 185 1 2 3 1 2 3 30272 16344 1401 15696 38090;38091;38092 44163;44164;44165 44165 3 QLSQSLLPAIVELAEDAK Unmodified 1924.0517 0.051707805 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BIV7;H3BLQ0;H3BLE7;H3BK50 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 100.58 100.58 3 3.9732E-19 35689 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.02 106.86 101.38 26.078 110.35 70.154 88.415 50.552 95 25 106 70 86 48 4 3 5 3 3 5 34024 16345 2272 15697 38093;38094;38095;38096;38097 44166;44167;44168;44169;44170;44171;44172 44169 7 QLSSLSK Unmodified 761.42832 0.42831841 2674;2716 Q8VHI6;Q8R5H6 Wasf3;Wasf1 Wiskott-Aldrich syndrome protein family member 3;Wiskott-Aldrich syndrome protein family member 1 no no 0 0 0 0 9 0 1 47.25 47.25 2 0.051814 11794 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.064 3.0253 0 0 129.84 0 106.69 0 0 0 120 0 102 0 0 0 1 0 1 0 11195 16346 2716;2674 15698 38098 44173 44173 1 QLSSNTHPK Unmodified 1010.5145 0.51450765 1603 P51830 Adcy9 Adenylate cyclase type 9 yes yes 0 0 0 0 7 0 1 30.026 30.026 3 0.034543 5472 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.282 22.657 24.418 18.093 28.481 13.605 0 34.112 23 19 28 14 0 32 1 1 1 1 0 1 1224.1 16347 1603 15699 38099 44174 44174 1 QLSSSSGNTDAQAEEDER Unmodified 1922.809 0.80897093 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;F6RCU2;F7CB97 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 1 0 1 35.296 35.296 3 0.0036381 9187 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 42.17 30.479 0 0 40.034 0 0 9.594 0 0 37 0 0 9 0 0 1 0 0 1 1875.4 16348 761 15700 38100 44175 44175 1 QLTEGTR Unmodified 803.41373 0.41373097 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 8.5 4.5 1 1 29.894 29.894 2 0.013378 6512 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.696 45.468 0 96.946 120.02 114.17 0 0 0 93 121 111 0 0 0 1 1 1 0 0 13750 16349 1157;2210 15701 38101;38102 44176;44177 44177 2 QLTFEEIAK Unmodified 1077.5706 0.57062555 3352 Q9WVJ2;F6ZQQ3;F6PXS6 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 7 0 1 65.812 65.812 3 0.003858 21928 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.347 15.929 29.952 18.196 0 20.767 0 49.036 28 19 0 19 0 46 1 1 0 1 0 1 1772.5 16350 3352 15702 38103 44178 44178 1 QLTIFNSQATIIIGGK Unmodified 1702.9618 0.96177059 2968 Q9CS84;E0CY11;E0CZA5;A0A0H2UH29;P0DI97;A0A0G2JE40 Nrxn1 Neurexin-1;Neurexin-1-beta yes no 0 0 0 0 11 0 1 81.367 81.367 3 0.0032165 25302 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.452 24.989 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 4461.8 16351 2968 15703 38104 44179 44179 1 QLTIFNTQAQIAIGGK Unmodified 1701.9414 0.94136949 889 E9Q2X2;Q6P9K9;A0A087WPQ9;E9Q3Q4;Q8C985 Nrxn3 Neurexin-3;Neurexin-3-beta;Neurexin-3-beta, soluble form;Neurexin-3-beta, C-terminal fragment yes no 0 0 0 0 10 0 1 76.567 76.567 3 0.0015541 23365 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.053 21.42 49.063 0 49.525 0 46.477 47.71 46 0 46 0 46 46 1 0 1 0 1 1 2970.7 16352 889 15704 38105 44180 44180 1 QLTQDLLNSYIENEGK Unmodified 1863.9214 0.92142191 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 8.67 3.09 1 1 1 78.739 78.739 3 4.2335E-06 28070 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.501 55.698 148.47 62.452 100.38 79.318 214.89 124.16 139 65 93 74 213 120 2 1 2 1 3 2 17087 16353 1581 15705 38106;38107;38108 44181;44182;44183 44182 3 QLVAGAVAGAVSR Unmodified 1197.683 0.68296996 2193 Q6GQS1 Slc25a23 Calcium-binding mitochondrial carrier protein SCaMC-3 yes yes 0 0 0 0 10 0 1 55.143 55.143 2 1.0007E-11 13822 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.626 39.424 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16354 2193 15706 38109 44184 44184 1 QLVALLR Unmodified 811.52797 0.52797287 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 11 0 1 63.546 63.546 2 0.027669 17111 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.071 10.985 0 0 244 0 0 0 0 0 244 0 0 0 0 0 1 0 0 0 35931 16355 2324 15707 38110 44185 44185 1 QLVDIREPETQPVCFFR Unmodified 2133.0677 0.067708995 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 1 10 3 1 1 69.832 69.832 3 0.0012068 23994 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.866 33.431 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16356 2077 15708 38111;38112 44186;44187 44186 2 QLVHELDEAEYQEIR Unmodified 1870.9061 0.9061062 1067 G3UXZ5;P97371;G3UXY0;G3X9K9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 3 0 1 60.919 60.919 3 2.2134E-12 21614 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.773 73.941 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16357 1067 15709 38113 44188 44188 1 QLVTNACLIK Unmodified 1158.6431 0.64307898 244 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 0 9 0 1 61.139 61.139 3 0.042283 18356 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.589 12.576 30.044 0 0 90.719 0 59.696 28 0 0 83 0 56 1 0 0 1 0 1 4952 16358 244 15710 38114 44189 44189 1 QLWGLLIEETEKR Unmodified 1613.8777 0.8777066 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 9 0 1 80.686 80.686 3 0.00082659 27675 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.856 38.028 210.35 0 173.72 181.22 216.46 185.7 197 0 169 179 221 180 1 0 1 1 1 1 19359 16359 2148 15711 38115 44190 44190 1 QLYNIYAK Unmodified 1011.5389 0.53893149 1273 O88696 Clpp ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 0 10 0 1 59.48 59.48 2 0.0099119 15817 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.997 56.888 39.564 27.124 0 0 74.072 97.024 37 28 0 0 74 93 1 1 0 0 1 1 4202 16360 1273 15712 38116 44191 44191 1 QLYSASTEGLLNR Unmodified 1450.7416 0.74160705 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 7 0 1 59.691 59.691 3 0.050155 19150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 34.611 9.2249 59.701 44.462 27.327 0 46.477 47.71 56 46 28 0 46 46 1 1 1 0 1 1 3581.3 16361 967 15713 38117 44192 44192 1 QLYVLGHEAMK Unmodified 1287.6645 0.66454271 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 8 0 1 56.591 56.591 3 0.00014442 17003 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.961 67.107 127.49 88.025 139.44 113.01 0 148.17 120 93 139 111 0 139 1 1 1 1 0 1 11751 16362 1876 15714 38118 44193 44193 1 QMDTNNDGK Unmodified 1021.4135 0.41347298 1832;1734 P62748;A0A1Y7VMK3;P84075;E9PV73 Hpcal1;Hpca Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 0 4 0 1 34.395 34.395 3 0.0019632 8814 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.387 44.823 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 4738.7 16363 1734;1832 15715 38119 44194 44194 1 QMEQISQFLK Unmodified 1250.6329 0.63290823 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 7 0 1 71.455 71.455 2 5.1849E-05 24597 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.85 64.886 29.952 18.196 0 30.104 26.577 38.684 28 19 0 28 28 37 1 1 0 1 1 1 2931.5 16364 3315 15716 38120 44195 44195 1 QMFLATWK Unmodified 1023.5212 0.52117293 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 11.5 0.5 1 1 72.628 72.628 2 0.011089 21202 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.85 49.768 143.14 172.06 77.401 0 83.68 78.884 134 172 74 0 80 74 2 3 1 0 1 1 32788 16365 1203 15717 38121;38122 44196;44197;44198 44196 3 QMIFVPSSIALLTVLER Unmodified 1916.0805 0.080505512 3169 Q9EQ06 Hsd17b11 Estradiol 17-beta-dehydrogenase 11 yes yes 0 0 0 0 12 0 1 102.14 102.14 3 0.00042443 28820 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.688 35.948 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16366 3169 15718 38123 44199 44199 1 QMNPYIQVTSHQNR Unmodified 1714.8209 0.82093678 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7.5 0.5 1 1 44.677 44.677 3 7.1371E-05 12128 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.887 58.499 49.888 65.195 35.982 78.737 0 0 47 65 37 74 0 0 2 2 1 2 0 0 8381.8 16367 1876 15719 38124;38125 44200;44201 44200 2 QMQAMIRQR 2 Oxidation (M) 1192.5805 0.5804955 1045 F8WI37;Q8BRH4 Kmt2c Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase 2C yes no 0 0 2 1 5 0 1 51.508 51.508 2 0.033273 16797 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.994 17.845 0 39.368 0 20.094 35.764 58.675 0 37 0 19 37 56 0 1 0 1 1 1 2717.7 16368 1045 15720 38126 44202 44202 48;49 1 QMQEDEQK Unmodified 1034.4339 0.43387407 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 0 0 0 0 3 0 1 34.386 34.386 2 0.0088683 9408 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.72 53.548 49.358 0 0 30.079 27.906 0 46 0 0 28 28 0 1 0 0 1 1 0 2462.2 16369 3360 15721 38127 44203 44203 1 QMSGAQIK Unmodified 861.43784 0.43783723 1668;394;1647 P60335;Q61990;B2M1R7;A0A2R8VHP9;Q3TT81;A0A2R8VI25;A0A2R8W6U6;A0A2R8VI92;A0A2R8W6H3;P57722;G3UYM5 Pcbp1;Pcbp2;Pcbp3 Poly(rC)-binding protein 1;Poly(rC)-binding protein 2;Poly(rC)-binding protein 3 no no 0 0 0 0 8 0 1 41.856 41.856 2 0.062115 10044 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.916 7.4855 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16370 1668;394;1647 15722 38128 44204 44204 1 QMSLLLR Unmodified 859.49496 0.49495818 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 10.7 1.7 1 1 1 60.124 60.124 2 0.007051 16193 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130 39.062 1495.2 588.71 502.59 1254.3 758.3 1744.7 1399 619 482 1188 782 1657 3 2 1 3 2 3 290100 16371 1881 15723 38129;38130;38131 44205;44206;44207 44206 3 QMVEILHK Unmodified 996.54264 0.54263666 259 A0A1B0GS58;Q9CQM9 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 8 0 1 53.933 53.933 3 0.010014 15707 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.305 32.465 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16372 259 15724 38132 44208 44208 1 QMVETELK Unmodified 976.48993 0.48993238 1715 P62259;D6REF3;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 7 3.54 1 1 1 1 52.067 52.067 2;3 0.002183 16977 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.692 19.583 403.75 306.43 410.37 319.4 398.89 466.52 380 315 408 318 404 447 5 3 3 3 3 4 49909 16373 1715 15725 38133;38134;38135;38136 44209;44210;44211;44212;44213 44213 5 QMYMSLPQGEK Unmodified 1310.5999 0.59989354 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 0 0 0 0 10.5 2.5 1 1 59.192 59.192 2 0.00044971 18355 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.465 48.747 69.65 18.848 0 20.767 0 69.29 65 19 0 19 0 65 2 1 0 1 0 2 8117.8 16374 1383 15726 38137;38138 44214;44215 44214 2 QNAAPLVK Unmodified 839.4865 0.48650199 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 0 7 0 1 44.555 44.555 2 0.022487 12001 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.774 22.569 49.128 45.631 0 0 26.935 68.521 46 46 0 0 28 65 1 1 0 0 1 1 2782.2 16375 2792 15727 38139 44216 44216 1 QNADISAMQDTINKLENELR Unmodified 2302.1223 0.12232334 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 6 0 1 86.285 86.285 3 0.002834 32293 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.598 26.52 29.928 0 19.55 19.245 18.99 0 28 0 19 19 19 0 1 0 1 1 1 0 1197.8 16376 1329 15728 38140 44217 44217 1 QNDDIGPPPNLEPSDR Deamidation (N) 1763.7962 0.7962214 3434 yes yes 0 1 0 0 1 0 1 75.71 75.71 2 0.037535 26072 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.836 33.85 0 32.817 9.982 23.189 13.943 19.856 0 31 12 22 15 19 0 1 1 1 1 1 8695.2 + 16377 3434 15729 38141 44218 44218 1154 1 QNDVFGEADQ Unmodified 1121.4625 0.46253166 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 2 0.816 1 1 1 53.923 53.923 2 3.5647E-05 18050 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 121.5 70.799 114.14 36.731 81.242 37.195 135.82 76.872 107 38 79 37 134 75 4 2 3 2 4 3 30331 16378 1595 15730 38142;38143;38144 44219;44220;44221;44222 44221 4 QNEEPVFSK Unmodified 1076.5138 0.51383895 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 5 0 1 49.743 49.743 2 0.001188 15870 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.456 50.269 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16379 2322 15731 38145 44223 44223 1 QNEEPVFSR Unmodified 1104.52 0.51998696 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 3 0 1 41.652 41.652 2 0.0028681 12778 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.096 56.714 49.128 45.631 0 0 58.576 0 46 46 0 0 56 0 1 1 0 0 1 0 4453.8 16380 967 15732 38146 44224 44224 1 QNEHEVSPR Unmodified 1094.5105 0.51048491 176 Q3UVT7;A0A0R4J0J0;Q9JHU2 Palmd Palmdelphin yes no 0 0 0 0 2 0 1 20.31 20.31 3 0.026403 3226 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.73 13.539 0 0 14.518 14.145 15.516 16.613 0 0 14 14 16 16 0 0 1 1 1 1 1595.4 16381 176 15733 38147 44225 44225 1 QNFIDPLQNLHDK Unmodified 1580.7947 0.79470526 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 0 7 0 1 65.011 65.011 3 0.033373 21574 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.44 15.204 59.269 73.48 75.361 0 0 99.138 56 74 74 0 0 93 1 1 1 0 0 1 9707.3 16382 491 15734 38148 44226 44226 1 QNFIDPLQNLHDKDLR Unmodified 1965.0068 0.0068232975 491 A2ALV3;Q62420;Q8BXU5;A2ALV1;F6ZL13 Sh3gl2 Endophilin-A1 yes no 0 0 0 1 8.67 3.09 1 1 1 63.667 63.667 4 6.4002E-05 22619 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.355 63.706 266.77 161.88 112.04 286.29 288.03 245.73 250 167 115 273 296 237 4 3 2 4 4 3 80450 16383 491 15735 38149;38150;38151 44227;44228;44229;44230 44230 4 QNLLSQSHAYQQFLR Unmodified 1831.9329 0.93293007 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 9 0.816 1 1 1 60.448 60.448 3 1.9858E-22 18912 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.14 111.17 188.15 81.373 47.792 212.23 53.91 205.27 176 84 46 204 56 194 3 2 1 4 1 3 62104 16384 2148 15736 38152;38153;38154 44231;44232;44233;44234 44231 4 QNLQICVQVASK Unmodified 1386.7289 0.72893388 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 4.3 1 1 1 1 59.646 59.646 3 4.3457E-05 18525 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.763 58.1 20.076 27.962 28.517 0 0 29.848 19 28 28 0 0 28 1 1 1 0 0 1 5899.8 16385 2185 15737 38155;38156;38157;38158 44235;44236;44237;44238 44236 4 QNPSITWIR Unmodified 1113.5931 0.59309232 1841 P97300 Nptn Neuroplastin yes yes 0 0 0 0 8.5 0.5 1 1 57.315 57.315 2 2.713E-05 17268 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 144.5 94.684 69.323 83.638 0 68.921 112.94 0 65 83 0 65 111 0 1 1 0 1 1 0 15586 16386 1841 15738 38159;38160 44239;44240 44239 2 QNSLDEDLIR Unmodified 1201.5939 0.59388018 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 53.949 53.949 2 2.2298E-15 18228 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 174.98 114.15 325.19 224.66 339.16 38.228 232.86 262.29 306 228 329 37 227 251 5 4 5 1 3 4 70042 16387 1876 15739 38161;38162;38163;38164 44241;44242;44243;44244;44245 44244 5 QNTESPR Unmodified 830.38824 0.38824451 1079 H7BX46;G3X932;P59281;H3BJM3 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 2 0 1 18.418 18.418 2 0.034462 2834 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 37.995 6.3919 9.145 0 9.837 0 15.99 6 9 0 9 0 15 1 1 0 1 0 1 750.28 16388 1079 15740 38165 44246 44246 1 QNVNAAMVFEFLYK Unmodified 1672.8283 0.82831357 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 13 0 1 91.653 91.653 3 0.00075559 36479 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.185 34.858 39.522 0 30.097 0 29.288 0 37 0 28 0 28 0 1 0 1 0 1 0 2357.1 16389 1836 15741 38166 44247 44247 1 QNYHQDAEAAINR Unmodified 1528.7019 0.7018675 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 0 6.67 4.5 1 1 1 35.108 35.108 3 1.0179E-16 8843 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.76 126.87 59.558 74.282 26.208 90.25 0 37 56 74 28 84 0 37 2 2 1 2 0 1 31610 16390 1335 15742 38167;38168;38169 44248;44249;44250 44250 3 QPAENVNQYLTDSK Unmodified 1605.7635 0.76346471 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 57.803 57.803 2;3 4.9951E-05 19157 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.45 77.023 257.5 189.73 23.122 207.61 220.66 58.754 241 195 28 195 222 56 3 3 1 3 3 1 25779 16391 1876 15743 38170;38171;38172;38173 44251;44252;44253;44254 44252 4 QPEYAVVQR Unmodified 1088.5615 0.56145784 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 5 0 1 41.651 41.651 3 0.030809 11955 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.863 27.478 0 29.792 0 0 28.291 29.041 0 28 0 0 28 28 0 1 0 0 1 1 1547.2 16392 331 15744 38174 44255 44255 1 QPGDPSNTSAEDGADSGYVAADDTLSR Unmodified 2695.1481 0.14813998 2310 Q80U23 Snph Syntaphilin yes yes 0 0 0 0 1.5 0.5 1 1 54.089 54.089 4 1.1468E-05 16714 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.499 46.695 29.654 19.256 49.207 7.6907 19.521 0 28 19 47 9 19 0 2 1 2 1 1 0 3581.2 16393 2310 15745 38175;38176 44256;44257 44256 2 QPGIQSPSR Unmodified 968.50394 0.50394297 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6 0 1 32.692 32.692 2 0.064285 7143 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.937 25.054 0 9.0786 29.751 0 0 39.442 0 9 28 0 0 37 0 1 1 0 0 1 1680.9 16394 1382 15746 38177 44258 44258 1 QPGIVFVAAK Unmodified 1028.6019 0.6018661 1049 F8WIR1;P18242;F6Y6L6 Ctsd Cathepsin D yes no 0 0 0 0 10 1.87 1 1 1 1 63.306 63.306 2 8.3405E-05 19501 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.52 55.48 108.63 109.48 134.91 150.55 163.13 135.03 102 111 130 143 167 130 2 3 2 2 3 2 26190 16395 1049 15747 38178;38179;38180;38181 44259;44260;44261;44262;44263 44260 5 QPHTILR Unmodified 863.49774 0.49773538 1235 O55100 Syngr1 Synaptogyrin-1 yes yes 0 0 0 0 7 0 1 30.886 30.886 3 0.0074977 5757 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.713 21.108 29.63 27.015 46.61 31.243 50.789 32.663 28 28 46 32 51 32 1 1 1 1 1 1 2544.1 16396 1235 15748 38182 44264 44264 1 QPIQITMPFTDIGTFETVWQVK Unmodified 2578.3141 0.31414686 2050 Q5M8N0 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 101.92 101.92 3 3.4489E-05 36153 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.526 37.066 0 6.2275 14.349 9.5399 0 0 0 6 14 9 0 0 0 1 2 1 0 0 3274.4 16397 2050 15749 38183;38184 44265;44266 44266 2 QPLATQK Unmodified 784.4443 0.44430282 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.5 0.5 1 1 39.116 39.116 2 0.019615 8745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.66 30.382 53.947 111.8 159.58 74.41 153.16 222.69 51 111 157 74 157 213 1 2 2 1 2 2 16248 16398 1382 15750 38185;38186 44267;44268 44268 2 QPLPQHTSDPEQLGLK Unmodified 1786.9214 0.92136233 867 Q80XB4;E9PZF4 Nrap Nebulin-related-anchoring protein yes no 0 0 0 0 12 0 1 103.19 103.19 3 0.02561 29094 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.303 7.8938 0 3.0866 6.3068 0 6.276 0 0 3 6 0 6 0 0 1 1 0 1 0 61496 16399 867 15751 38187 44269 44269 1 QPLVAVQVK Unmodified 980.60187 0.6018661 1846 P97370 Atp1b3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 0 9 0 1 57.247 57.247 2 0.0030153 16597 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.439 55.419 29.904 27.776 0 0 58.576 0 28 28 0 0 56 0 1 1 0 0 1 0 2714.6 16400 1846 15752 38188 44270 44270 1 QPNTFDLVQK Deamidation (N) 1189.5979 0.59790293 3444 yes no 0 1 0 0 6 0 1 49.595 49.595 3 0.031682 15127 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.927 13.656 374.93 214.7 283.17 282.56 234.95 395.18 352 230 287 278 250 377 1 1 1 1 1 1 22237 + 16401 3444 15753 38189 44271 44271 1157 1 QPPGPEK Unmodified 751.38645 0.38645359 2356 Q811P8 Arhgap32 Rho GTPase-activating protein 32 yes yes 0 0 0 0 5 0 1 35.24 35.24 3 0.058304 8766 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.426 18.252 0 187.26 0 180.14 127.32 285.25 0 176 0 167 139 271 0 1 0 1 1 1 28732 16402 2356 15754 38190 44272 44272 1 QPPLLGDHPAEYGEGR Unmodified 1734.8325 0.83254733 1110 G5E924 Hnrnpl yes yes 0 0 0 0 4 0 1 48.899 48.899 3 0.0013803 15730 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.534 32.438 59.631 24.839 55.784 67.72 0 49.036 56 28 56 65 0 46 1 1 1 1 0 1 4104.3 16403 1110 15755 38191 44273 44273 1 QPQGHLLLIGVSGAGK Unmodified 1573.894 0.89402537 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 59.08 59.08 3 2.1004E-07 15625 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.746 62.201 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16404 3204 15756 38192 44274 44274 1 QPSGAGLCDITEGTVVPEDR Unmodified 2099.9793 0.9793475 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 0 3 0 1 62.309 62.309 3 0.038057 22394 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 30.652 14.768 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2236.3 16405 738 15757 38193 44275 44275 1 QPSVTISSK Unmodified 945.51311 0.51311067 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 7.5 0.5 1 1 45.431 45.431 2 0.0064415 11687 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.24 26.465 98.937 91.178 65.956 106.53 54.497 117.84 93 93 65 102 56 112 2 2 1 2 1 2 13349 16406 154 15758 38194;38195 44276;44277 44277 2 QPTELDALVFGHLYTILTTQLTSDELSEK Unmodified 3261.6657 0.66565473 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 9 0 1 106.94 106.94 4 7.0638E-09 37168 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.176 50.843 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 1210.9 16407 1265 15759 38196 44278 44278 1 QPVFGANFIK Unmodified 1119.6077 0.60767975 1856 P97765 Wbp2 WW domain-binding protein 2 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 68.437 68.437 2 3.4474E-05 19812 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.13 53.713 69.105 0 214.62 159.9 0 137.51 65 0 204 158 0 129 1 0 2 3 0 2 19604 16408 1856 15760 38197;38198;38199;38200 44279;44280;44281;44282 44280 4 QPVGVAAIITPWNFPSAMITR Unmodified 2268.2089 0.20889392 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 9.4 4.22 1 2 2 94.586 94.586 3;4 5.6176E-11 27065 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.352 79.578 6.438 20.216 46.738 6.4455 40.188 9.0357 6 19 46 6 39 9 1 1 2 1 3 1 32834 16409 2469 15761 38201;38202;38203;38204;38205 44283;44284;44285;44286;44287;44288;44289 44287 7 QPVLSQTEAR Unmodified 1127.5935 0.59348625 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 5.5 0.5 1 1 38.713 38.713 2 0.0098463 10062 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.758 19.409 30.044 20.216 0 70.433 32.546 0 28 19 0 65 32 0 1 1 0 2 1 0 8730.1 16410 1864 15762 38206;38207 44290;44291 44291 2 QPVYVADVSK Unmodified 1104.5815 0.58152458 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 7 0 1 54.001 54.001 3 0.0077945 16237 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.471 23.599 0 58.33 75.028 34.581 73.838 57.589 0 56 74 37 74 56 0 1 1 1 1 1 6738.5 16411 141 15763 38208 44292 44292 1 QQAAMGSQGNLSAEVEQATR Unmodified 2074.9702 0.97017979 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 0 7.33 4.03 1 1 1 54.631 54.631 3 1.095E-11 18569 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.38 83.368 108.65 19.256 118.27 27.088 37.018 108.74 102 19 112 28 37 103 3 1 3 1 2 3 20452 16412 3324 15764 38209;38210;38211 44293;44294;44295 44293 3 QQAPPVR Unmodified 794.43989 0.43988615 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 27.267 27.267 2 0.0078798 5684 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.95 29.917 1088.7 991.93 669.01 973.04 1435.6 1258 1022 1011 670 946 1444 1216 5 7 4 5 5 6 264700 16413 1158 15765 38212;38213;38214;38215;38216 44296;44297;44298;44299;44300;44301;44302;44303 44297 8 QQDVLCFLEANK Unmodified 1463.7079 0.70786408 3219 Q9JJU8 Sh3bgrl SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 0 0 7 0 1 77.833 77.833 3 0.0018824 27594 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.042 37.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16414 3219 15766 38217 44304 44304 1 QQEEAQAAAAAASAESR Unmodified 1687.7762 0.77615466 111 A0A0J9YTW6;B1AWN6;F7AMU5 Scn2a1 Sodium channel protein yes no 0 0 0 0 1.5 0.5 1 1 46.086 46.086 3 3.7035E-07 14432 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.94 88.718 0 19.907 18.488 19.665 0 29.848 0 19 19 19 0 28 0 1 1 1 0 1 11423 16415 111 15767 38218;38219 44305;44306 44306 2 QQEVIADK Unmodified 929.48181 0.48181054 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 4 0 1 42.769 42.769 2 0.0058229 12818 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.61 5.565 54.446 0 46.515 66.953 70.144 0 51 0 46 65 70 0 1 0 1 1 1 0 4809.3 16416 3204 15768 38220 44307 44307 1 QQGQVAGAR Unmodified 913.47298 0.47297719 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 4 0.816 1 1 1 21.897 21.897 2 0.0022748 3485 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.741 39.62 59.516 27.617 72.743 23.342 64.939 77.031 56 28 70 23 65 74 3 2 3 2 2 2 7861.4 16417 1275 15769 38221;38222;38223 44308;44309;44310 44309 3 QQISNVVNQANLQLFWNMYNSR Deamidation (N) 2667.2864 0.28636898 2454 Q8BTG7;A0A1D5RMH3 Ndrg4 Protein NDRG4 yes no 0 1 0 0 12 0 1 90.732 90.732 3 1.6684E-07 25823 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.883 57.379 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16418 2454 15770 38224 44311 44311 929 1 QQLAAYQEEAER Unmodified 1434.6739 0.67392142 3402 Q9Z2Y3;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 3.5 0.5 1 1 45.958 45.958 2 1.2701E-14 14352 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.76 113.1 0 9.576 30.296 0 0 89.544 0 9 28 0 0 84 0 1 1 0 0 2 5360.1 16419 3402 15771 38225;38226 44312;44313 44313 2 QQLAEEEAR Unmodified 1072.5149 0.51490158 959 Q0GNC1;E9QLA5;A0A1Y7VM80 Inf2 Inverted formin-2 yes no 0 0 0 0 1.5 0.5 1 1 34.47 34.47 2 0.0010876 8750 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.2 66.652 58.731 56.275 0 49.57 37.624 19.18 55 56 0 46 37 19 2 1 0 2 1 1 6296.6 16420 959 15772 38227;38228 44314;44315 44314 2 QQLAPLEK Unmodified 925.52328 0.52328142 1997 Q3UMR5 Mcu Calcium uniporter protein, mitochondrial yes yes 0 0 0 0 6 0 1 52.106 52.106 2 0.031071 16369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.692 16.161 59.731 15.405 46.869 37.648 0 0 56 19 46 37 0 0 1 1 1 1 0 0 1949 16421 1997 15773 38229 44316 44316 1 QQLEDGEVEIER Unmodified 1443.6842 0.68415175 1469 P27671 Rasgrf1 Ras-specific guanine nucleotide-releasing factor 1 yes yes 0 0 0 0 1 0 1 49.672 49.672 2 2.7435E-13 14838 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.47 88.285 12.745 1.992 20.374 0 0 9.594 12 3 19 0 0 9 1 1 1 0 0 1 3611.6 16422 1469 15774 38230 44317 44317 1 QQLEETSEIR Unmodified 1231.6044 0.60444487 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 2 0 1 42.592 42.592 2 0.0021449 13000 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.184 43.377 0 19.906 18.519 18.952 37.831 0 0 19 19 19 37 0 0 1 1 1 1 0 2227.3 16423 581 15775 38231 44318 44318 1 QQLETEK Unmodified 874.43961 0.43961137 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 4 0 1 38.547 38.547 3 0.03773 10881 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.611 15.649 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16424 1451 15776 38232 44319 44319 1 QQLGTAVEMEIAQMLEENSR Unmodified 2276.0777 0.077681334 3232 Q9JKK7 Tmod2 Tropomodulin-2 yes yes 0 0 0 0 5 0 1 95.851 95.851 3 2.2537E-07 35499 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.639 52.146 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 0 0 1390.5 16425 3232 15777 38233 44320 44320 1 QQLLIGAYAK Unmodified 1103.6339 0.63389451 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 9.5 0.5 1 1 63.176 63.176 2 2.3944E-11 17383 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 164.57 116.06 63.828 0 92.754 48.042 115.51 179.44 60 0 88 51 116 176 1 0 1 1 1 2 17400 16426 1822 15778 38234;38235 44321;44322 44322 2 QQLLISGGR Unmodified 970.55598 0.55597854 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8.5 0.5 1 1 47.313 47.313 2 0.0058474 12774 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.424 17.392 0 0 57.423 46.856 0 0 0 0 55 46 0 0 0 0 1 1 0 0 4430.5 16427 570 15779 38236;38237 44323;44324 44323 2 QQLSAEELDAQLDAYNAR Unmodified 2033.9654 0.96541199 1159 O08583 Alyref THO complex subunit 4 yes yes 0 0 0 0 4 0 1 67.024 67.024 3 0.00027999 24150 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.487 39.719 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 4169.6 16428 1159 15780 38238 44325 44325 1 QQLTNTEVR Unmodified 1087.5622 0.56218613 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 7.33 4.03 1 1 1 35.869 35.869 2 0.0011695 9217 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.806 32.695 48.883 0 79.822 28 0 49.036 46 0 74 28 0 46 1 0 1 1 0 1 6263 16429 1653 15781 38239;38240;38241 44326;44327;44328 44328 3 QQLVASHLEK Unmodified 1151.6299 0.62987176 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 8 0 1 45.463 45.463 3 0.0021781 11799 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.918 39.259 0 0 80.068 0 132.38 104.95 0 0 74 0 130 102 0 0 1 0 1 1 6795.7 16430 2844 15782 38242 44329 44329 1 QQNFNTGIK Unmodified 1048.5302 0.53015772 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 46.521 46.521 2;3 0.00019049 13758 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.98 73.682 256.69 46.283 100.23 40.441 113.8 215.89 240 46 93 37 112 204 4 1 1 1 2 3 23941 16431 551 15783 38243;38244;38245;38246 44330;44331;44332;44333;44334 44330 5 QQNWDSLIAGDQLINQK Unmodified 1969.9858 0.9857535 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 10 3 1 1 76.636 76.636 3 5.6311E-07 29113 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.311 62.626 29.814 47.309 136.43 27.799 26.683 87.717 28 46 130 28 28 83 1 1 2 1 1 2 13843 16432 927 15784 38247;38248 44335;44336 44336 2 QQPDEQLR Unmodified 1012.4938 0.49377221 1110 G5E924;Q8R081 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 2 0 1 31.988 31.988 2 0.015682 7987 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.168 49.164 30.044 0 0 0 0 20.254 28 0 0 0 0 19 1 0 0 0 0 1 3055.6 16433 1110 15785 38249 44337 44337 1 QQPPDLVDFAVEYFTR Unmodified 1923.9367 0.93667805 68 A0A0A6YX73;Q8K1M3 Prkar2a yes no 0 0 0 0 8.67 3.09 1 1 1 99.49 99.49 3 7.9037E-06 36366 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.13 83.808 20.212 14.759 37.582 40.391 57.88 27.145 19 14 37 40 58 26 1 1 2 3 3 2 9845.4 16434 68 15786 38250;38251;38252 44338;44339;44340 44339 3 QQQEALVLQVGDLR Unmodified 1595.8631 0.86311917 643 B9EKI3;D6RJK7 Tmf1 TATA element modulatory factor yes no 0 0 0 0 9 0 1 92.985 92.985 2 0.005817 33126 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.776 12.792 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16435 643 15787 38253 44341 44341 1 QQQEILAAKPWTK Unmodified 1539.8409 0.84092717 1212 O35864;A0A087WRH6 Cops5 COP9 signalosome complex subunit 5 yes no 0 0 0 1 9 0 1 58.771 58.771 3 0.0062027 17316 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.656 40.865 58.656 0 60.296 0 57.278 37.808 55 0 56 0 56 37 1 0 1 0 1 1 2822.1 16436 1212 15788 38254 44342 44342 1 QQQLPDGTGR Unmodified 1098.5418 0.54178503 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6.67 4.5 1 1 1 34.385 34.385 2 4.4731E-07 8890 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.84 101.21 108.69 60.575 75.104 91.549 113.09 94.845 102 65 74 93 112 92 2 2 2 2 2 2 17740 16437 2186 15789 38255;38256;38257 44343;44344;44345 44344 3 QQQQLQQQQQR Unmodified 1439.7229 0.7229373 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7;J3QM71;J3QP32 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 5 0 1 25.71 25.71 3 0.0016466 4552 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.32 33.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16438 1081 15790 38258 44346 44346 1 QQQQQQNDVVK Deamidation (N) 1342.6477 0.64770667 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 1 0 0 3 0 1 36.15 36.15 3 0.058719 10267 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.299 28.76 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16439 2250 15791 38259 44347 44347 891 1 QQQQQQNDVVK Unmodified 1341.6637 0.66369108 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 4.5 0.5 1 1 34.853 34.853 3 0.00020491 8668 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.266 66.387 29.952 18.196 0 30.604 0 0 28 19 0 28 0 0 1 1 0 1 0 0 2154.5 16440 2250 15791 38260;38261 44348;44349 44349 2 QQSELQSQVR Unmodified 1201.6051 0.60511357 2140 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8;A2A6G6;A2A6H1;A2A6G5;E9Q0N6 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 6.67 4.5 1 1 1 34.036 34.036 2 3.2093E-05 8736 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.42 68.983 0 29.792 0 107.93 131.02 28 0 28 0 101 130 28 0 1 0 2 2 1 17986 16441 2140 15792 38262;38263;38264 44350;44351;44352 44351 3 QQSEPASELGHSLNENVLKPAQEK Unmodified 2632.3093 0.30927249 3453 V9GWV1;V9GXM1 Arfgap1 yes no 0 0 0 1 5 0 1 55.947 55.947 4 4.7109E-05 18781 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.827 44.104 39.452 17.098 27.373 38.133 35.96 28.822 37 19 28 37 37 28 1 1 1 1 1 1 2800.8 16442 3453 15793 38265 44353 44353 1 QQSLEAEEAK Unmodified 1131.5408 0.54078198 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 6.67 4.5 1 1 1 41.521 41.521 2;3 4.3529E-05 12814 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.25 85.829 177.41 98.769 215.82 175.58 245.49 181.67 167 102 213 176 250 176 2 1 2 2 3 2 20262 16443 3267 15794 38266;38267;38268 44354;44355;44356 44354 3 QQSNEHLR Unmodified 1010.4894 0.48935553 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 2.5 0.5 1 1 18.833 18.833 3 0.00055494 2762 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.24 96.433 69.176 33.58 67.22 16.761 0 0 65 37 65 19 0 0 1 1 1 1 0 0 6379.9 16444 310 15795 38269;38270 44357;44358 44358 2 QQSPGLGR Unmodified 841.44061 0.44061443 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 5 0 1 29.293 29.293 2 0.005146 6079 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.64 36.898 103.54 31.304 64.742 71.558 0 49.036 97 37 65 69 0 46 1 1 1 1 0 1 6210.9 16445 2396 15796 38271 44359 44359 1 QQSPGLGRPIWLQIAESAYR Unmodified 2269.1967 0.19674933 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 10.5 0.5 1 1 77.317 77.317 3 2.5266E-10 23808 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.414 79.529 60.088 0 0 50.278 0 59.696 56 0 0 46 0 56 2 0 0 1 0 2 9504.5 16446 2396 15797 38272;38273 44360;44361 44360 2 QQVAPMDDETGKELVLALYDYQEK Unmodified 2782.3371 0.33712672 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 6 0 1 85.188 85.188 4 3.4647E-07 31737 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.943 43.321 0 0 0 0 26.935 68.521 0 0 0 0 28 65 0 0 0 0 1 1 4080.8 16447 551 15798 38274 44362 44362 1 QQWQQLYDTLNAWK Unmodified 1820.8846 0.8845829 2833 Q99JX4;A2A702;A2A701 Eif3m Eukaryotic translation initiation factor 3 subunit M yes no 0 0 0 0 10.5 0.5 1 1 89.462 89.462 3 3.7877E-05 28943 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.531 80.698 29.514 36.404 58.259 0 0 0 28 37 56 0 0 0 1 1 1 0 0 0 4986 16448 2833 15799 38275;38276 44363;44364 44363 2 QQYESVAAK Unmodified 1022.5033 0.50327426 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 9 4 1 1 41.981 41.981 2 0.0008225 12251 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.86 66.071 80.475 48.323 37.135 19.505 113.57 47.71 75 46 37 19 111 46 1 1 1 1 2 1 8048.2 16449 1423 15800 38277;38278 44365;44366 44365 2 QQYLQSIEDR Unmodified 1278.6204 0.62042929 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 8.5 4.5 1 1 52.696 52.696 2 2.4126E-07 17784 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 140.05 97.135 118.5 73.407 39.835 79.373 127.35 114.69 111 74 37 74 129 111 2 1 1 1 2 2 10092 16450 2918 15801 38279;38280 44367;44368 44367 2 QRDELNR Unmodified 929.46789 0.46789181 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 1 3 0 1 20.775 20.775 3 0.03905 3286 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.039 27.957 39.335 16.772 47.33 27.783 0 39.442 37 19 46 28 0 37 1 1 1 1 0 1 4028.3 16451 1760 15802 38281 44369 44369 1 QREEAEAAAR Unmodified 1129.5476 0.54759869 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 1 7 6 1 1 21.227 21.227 3 2.2185E-05 3131 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.36 74.174 68.273 89.817 71.143 54.713 101.24 85.589 64 88 68 51 102 83 2 2 2 1 2 2 48514 16452 1415 15803 38282;38283 44370;44371;44372 44372 3 QSALISWQPPR Unmodified 1281.683 0.68296996 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8.5 0.5 1 1 62.159 62.159 3 0.00014442 18975 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.961 68.949 48.822 142.86 104.6 97.535 46.397 59.696 46 139 102 92 46 56 1 3 2 2 1 1 20041 16453 2479 15804 38284;38285 44373;44374;44375 44375 3 QSDENLDLAR Unmodified 1159.5469 0.54692999 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 43.171 43.171 2 0.0047302 13244 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.358 32.197 59.917 32.996 121.94 28.893 0 89.544 56 32 116 28 0 84 1 1 3 1 0 3 11069 16454 2539 15805 38286;38287 44376;44377;44378 44376 3 QSDGTPYSSAQPQR Unmodified 1520.6855 0.68554874 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4 0 1 33.568 33.568 3 0.00023993 8528 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.972 56.704 0 0 0 0 18.867 29.31 0 0 0 0 19 28 0 0 0 0 1 1 2639.8 16455 1999 15806 38288 44379 44379 1 QSEDLGSQFTEIFIK Unmodified 1740.857 0.85703074 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 6 0 1 83.965 83.965 3 0.00038678 31203 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.827 45.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16456 3387 15807 38289 44380 44380 1 QSEQVEK Unmodified 846.40831 0.40831125 2197 Q6IRU5;F7BHJ0 Cltb Clathrin light chain B yes no 0 0 0 0 6.25 3.96 1 1 1 1 32.604 32.604 2 0.027702 8048 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.431 36.643 137.68 105.42 101.95 193.23 260.76 153.37 129 102 102 185 259 148 3 2 2 3 3 3 20643 16457 2197 15808 38290;38291;38292;38293 44381;44382;44383;44384 44382 4 QSFTTVADTPENLR Unmodified 1577.7686 0.76855009 3134 Q9DC07 Nebl LIM zinc-binding domain-containing Nebulette yes yes 0 0 0 0 5 0 1 55.84 55.84 3 1.2139E-14 18767 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.676 75.873 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16458 3134 15809 38294 44385 44385 1 QSGAFLATSESLILQLVR Unmodified 1932.068 0.068026571 1840 P85094 Isoc2a Isochorismatase domain-containing protein 2A, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 100.63 100.63 3 0.0014202 35810 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.094 25.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4166.6 16459 1840 15810 38295;38296 44386;44387 44386 2 QSGEAFVELESEDDVK Unmodified 1780.8003 0.80030372 3401 Q9Z2X1;J3QMT0;J3QM80;J3QP45 Hnrnpf Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 0 2.5 0.5 1 1 65.696 65.696 3 8.7706E-08 23820 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.32 83.587 69.745 19.892 19.365 30.604 0 59.696 65 19 19 28 0 56 1 1 1 1 0 2 5567.2 16460 3401 15811 38297;38298 44388;44389 44389 2 QSIAIDDCTFHQCVR Unmodified 1848.8247 0.82470153 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 9 4 1 1 49.916 49.916 3 2.5055E-12 16114 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.5 108.87 49.225 95.633 0 100.97 35.885 28.824 46 93 0 93 37 28 1 2 0 2 1 1 15372 16461 1836 15812 38299;38300 44390;44391 44390 2 QSIINPDWNFEK Unmodified 1489.7201 0.72014333 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 8.5 2.42 2 2 3 1 2 72.366 72.366 2;3;4 1.2398E-22 24389 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 166.11 89.938 651.51 559.28 485.27 659.47 591.86 484.92 611 568 485 636 595 467 8 9 6 8 7 5 181670 16462 1554 15813 38301;38302;38303;38304;38305;38306;38307;38308;38309;38310 44392;44393;44394;44395;44396;44397;44398;44399;44400;44401;44402 44398 11 QSILELAQQWGEFK Unmodified 1675.857 0.85697116 1443 Q8CBC8;P24288;E9Q4K3;A0A0N4SV61 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 11 2 1 1 91.532 91.532 3 0.00031113 36301 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.173 38.485 59.784 36.703 20.071 8.6408 0 89.544 56 37 19 9 0 84 2 1 1 1 0 2 12653 16463 1443 15814 38311;38312 44403;44404 44404 2 QSIPATMNAR Unmodified 1087.5444 0.54442757 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6 0 1 40.97 40.97 2 0.00028845 11145 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.355 49.411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16464 2479 15815 38313 44405 44405 1 QSLEASLAETEGR Unmodified 1389.6736 0.67358707 659 CON__P13645;CON__P02535-1;A2A513;P02535 Krt10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 3.5 0.5 1 1 53.805 53.805 2;3 0.00019677 18065 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98 67.342 49.358 20.216 0 51.371 0 29.848 46 19 0 47 0 28 1 1 0 2 0 1 11147 + 16465 659 15816 38314;38315 44406;44407 44407 2 QSLETICLLLAYK Unmodified 1550.8378 0.83781563 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 10 0.816 1 1 1 90.548 90.548 2;3 3.9215E-05 29043 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.86 76.907 0 0 0 0 37.714 28.772 0 0 0 0 37 28 0 0 0 0 1 1 21966 16466 1710;1711;1770 15817 38316;38317;38318 44408;44409;44410 44410 3 QSLGGFLK Unmodified 848.4756 0.47560295 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 9 0 1 61.933 61.933 2 0.010281 18838 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.033 37.072 197.31 0 200.26 0 279.28 0 185 0 186 0 267 0 1 0 1 0 1 0 10069 16467 1019 15818 38319 44411 44411 1 QSLLFCPK Unmodified 991.51609 0.51608756 113 A0A0J9YUI7;A0A0J9YU56;Q9D8W7 Ociad2 OCIA domain-containing protein 2 yes no 0 0 0 0 10 0 1 62.503 62.503 3 0.044399 17143 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.794 21.052 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16468 113 15819 38320 44412 44412 1 QSLPPGLAVK Unmodified 1008.5968 0.59678072 3218 Q9JJI8 Rpl38 60S ribosomal protein L38 yes yes 0 0 0 0 8 0 1 57.98 57.98 3 0.031457 17648 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.73 21.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16469 3218 15820 38321 44413 44413 1 QSLTVDPVVK Unmodified 1084.6128 0.61282471 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 7 0 1 57.089 57.089 3 0.00028358 17809 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.685 58.079 0 29.033 45.424 58.501 0 39.442 0 28 46 56 0 37 0 1 1 1 0 1 5391.3 16470 1957 15821 38322 44414 44414 1 QSNVEDSPEK Unmodified 1131.5044 0.50439648 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 3 0 1 35.47 35.47 3 0.0007534 9922 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.82 42.629 20.195 38.006 0 30.604 0 49.036 19 37 0 28 0 46 1 1 0 1 0 1 2392.2 16471 2343 15822 38323 44415 44415 1 QSPDEPLR Unmodified 940.46141 0.46140945 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WQA5;A0A087WSH7;H3BJV1;A0A087WRP4;A0A087WS74 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 6 4.97 1 1 1 34.537 34.537 2 0.005146 9527 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.64 78.069 48.236 150.66 276.46 162.43 251.12 85.099 46 149 268 167 250 83 1 3 2 2 3 1 30216 16472 2793 15823 38324;38325;38326 44416;44417;44418 44417 3 QSPINIDEDLTQVNVNLK Unmodified 2039.0535 0.053498719 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 6 0.816 1 1 1 77.975 77.975 3;4 3.0912E-07 28533 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.205 73.374 167.44 46.328 131.93 114.57 154.02 143.78 157 46 130 112 157 139 3 1 3 2 3 3 13779 16473 644 15824 38327;38328;38329 44419;44420;44421 44420 3 QSPINIDEDLTQVNVNLKK Unmodified 2167.1485 0.14846174 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 1 6.5 0.5 1 1 72.331 72.331 4 0.00077699 25922 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.702 30.937 39.11 135.09 35.306 0 126.57 0 37 130 37 0 121 0 1 2 1 0 2 0 8004.5 16474 644 15825 38330;38331 44422;44423 44422 2 QSPTLQR Unmodified 828.44537 0.44536545 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 6 0 1 30.469 30.469 2 0.054905 6182 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.243 14.595 0 23.664 48.352 0 41.923 58.5 0 23 46 0 42 56 0 1 1 0 1 1 2462 16475 853 15826 38332 44424 44424 1 QSPVDIDTATAQHDPALQPLLISYDK Unmodified 2835.4291 0.42905327 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 0 0 0 5.2 0.748 1 2 2 75.984 75.984 3;4;5 3.8361E-26 27682 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.83 101.1 118.49 138.24 148.02 184.24 80.964 136.27 111 139 148 177 84 130 2 4 4 5 2 3 73058 16476 1296 15827 38333;38334;38335;38336;38337 44425;44426;44427;44428;44429;44430 44430 6 QSQGTTPDTTPAR Unmodified 1358.6426 0.64262129 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 3 0 1 28.222 28.222 2 0.0040368 6616 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.727 44.944 9.657 0 0 10.93 0 0 9 0 0 10 0 0 1 0 0 1 0 0 1582.2 16477 3449;3451 15828 38338 44431 44431 1 QSTEESTIGR Unmodified 1106.5204 0.52038089 2221 Q6P5F6 Slc39a10 Zinc transporter ZIP10 yes yes 0 0 0 0 2 0 1 30.658 30.658 2 0.005778 7408 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.533 47.532 29.679 27.151 38.255 0 0 39.442 28 28 37 0 0 37 1 1 1 0 0 1 2594.2 16478 2221 15829 38339 44432 44432 1 QSTEFAISK Unmodified 1009.508 0.50802529 2290 Q7TPM9 Mtmr10 Myotubularin-related protein 10 yes yes 0 0 0 0 9 0 1 63.672 63.672 3 0.02515 19568 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.261 0 0 77.859 52.457 77.756 0 0 0 74 56 74 0 0 0 1 1 1 0 0 3560.8 16479 2290 15830 38340 44433 44433 1 QSTIVCHNR Unmodified 1113.5349 0.53492552 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 6 0 1 24.31 24.31 3 0.0043563 3880 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.076 44.908 9.5782 4.5167 9.4187 0 0 0 9 5 9 0 0 0 1 1 1 0 0 0 1394.5 16480 1955 15831 38341 44434 44434 1 QSVEADINGLR Deamidation (N) 1201.5939 0.59388018 659 CON__P13645;CON__P02535-1;A2A513;P02535;CON__P08730-1;P08730 Krt10;Krt13 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 13 no no 0 1 0 0 3 0 1 49.392 49.392 3 0.0040877 16408 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.091 30.251 0 0 20.558 0 38.044 19.168 0 0 19 0 37 19 0 0 1 0 1 1 2232 + 16481 659 15832 38342 44435 44435 192 1 QSVELCK Unmodified 862.42185 0.42185282 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10.7 3.3 1 2 45.094 45.094 2;3 0.012809 13784 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.485 28.038 526.65 399.91 441.28 416.18 385.14 345.05 494 408 449 408 384 334 3 3 3 3 2 3 55994 16482 2185 15833 38343;38344;38345 44436;44437;44438;44439 44438 4 QSVFKDFYELEPEK Unmodified 1757.8512 0.85121708 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 1 7 0 1 73.209 73.209 4 0.0086942 25351 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.532 27.425 59.91 0 29.994 0 57.278 37.808 56 0 28 0 56 37 1 0 1 0 1 1 4184.2 16483 2555 15834 38346 44440 44440 1 QSVLNVAGETGGK Unmodified 1258.6517 0.65172941 164 A0A0R4J087;Q8BJI1;E9Q4S9 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17;Transporter yes no 0 0 0 0 6 0 1 53.711 53.711 3 0.0021292 17073 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.7 26.495 118.6 30.398 58.17 0 0 88.478 111 37 56 0 0 83 1 1 1 0 0 1 3826.2 16484 164 15835 38347 44441 44441 1 QSVVLTSNFAK Unmodified 1192.6452 0.64518747 2292 Q7TQG7;Q9R1V4 Adam11 Disintegrin and metalloproteinase domain-containing protein 11 yes no 0 0 0 0 8 0 1 59.205 59.205 3 0.0050597 18241 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.343 29.961 78.814 53.374 53.583 76.532 61.496 86.723 74 56 56 74 65 83 1 1 1 1 1 1 3042 16485 2292 15836 38348 44442 44442 1 QTAASAGLVDAPAPSAASR Unmodified 1739.8802 0.8802258 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 6.5 3.1 2 1 1 1 1 47.885 47.885 2;3 2.105E-10 15265 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.33 88.875 316.65 194.61 252.83 329.11 64.418 215.63 297 196 251 316 65 204 6 5 5 6 1 5 202420 16486 2173 15837 38349;38350;38351;38352;38353;38354 44443;44444;44445;44446;44447;44448;44449;44450 44443 8 QTALAELVK Unmodified 971.56515 0.56514624 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7.5 0.5 1 1 63.626 63.626 2;3 0.0010371 20160 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.827 36.302 79.032 73.407 0 59.302 101.36 75.992 74 74 0 56 102 74 1 1 0 1 1 1 7281 16487 1321 15838 38355;38356 44451;44452 44452 2 QTALQQEAR Unmodified 1043.536 0.53597137 869 F7BX42;E9PZM8;Q99J85 Nptxr Neuronal pentraxin receptor yes no 0 0 0 0 4 0 1 32.352 32.352 2 0.0012856 7921 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.88 53.175 59.729 0 60.291 0 75.428 57.544 56 0 56 0 74 56 1 0 1 0 1 1 7399.7 16488 869 15839 38357 44453 44453 1 QTEIAYGTLDSGSTK Unmodified 1569.7522 0.75223132 1104;565 B0QZW1;F2Z488;G5E8H1 Gria3;Gria2 no no 0 0 0 0 5 0 1 55.318 55.318 2 0.0034693 18534 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.161 33.563 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1484.5 16489 565;1104 15840 38358 44454 44454 1 QTEIAYGTLEAGSTK Unmodified 1567.773 0.77296676 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 5 0 1 57.556 57.556 3 2.8119E-05 19556 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.451 75.702 69.468 54.9 0 0 38.702 0 65 56 0 0 37 0 1 1 0 0 1 0 5101.5 16490 2286 15841 38359 44455 44455 1 QTESTSFLEK Unmodified 1168.5612 0.56118307 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 0 5 0 1 54.015 54.015 2 0.00018857 17883 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.04 34.367 79.182 43.605 0 0 58.576 0 74 46 0 0 56 0 1 1 0 0 1 0 3709.7 16491 3256 15842 38360 44456 44456 1 QTETGEGSVCQR Unmodified 1350.5834 0.58339185 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A6PWP8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 2 0 1 27.932 27.932 2 0.0050971 6201 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.598 44.707 0 0 9.3362 9.0189 13.914 9.197 0 0 9 9 14 9 0 0 1 1 1 1 1226.2 16492 204 15843 38361 44457 44457 1 QTEVLLQPNPSAR Unmodified 1451.7732 0.77324153 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 5.5 0.5 1 1 51.334 51.334 2 8.3539E-11 16014 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 121.02 88.692 0 0 20.558 0 8.3971 29.608 0 0 19 0 9 28 0 0 1 0 1 1 5632.2 16493 533 15844 38362;38363 44458;44459 44459 2 QTFIDPLQLLQDK Unmodified 1557.8403 0.84025847 169 J3QQ44;A0A0R4J0B8;Q62421;J3QK75 Sh3gl3 Endophilin-A3 yes no 0 0 0 0 8 0 1 91.695 91.695 3 0.0016902 33321 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.328 27.639 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1423.4 16494 169 15845 38364 44460 44460 1 QTFIGHESDINAVAFFPNGYAFTTGSDDATCR Deamidation (N) 3509.547 0.54701293 1751 P62880;E9QKR0;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 1 0 0 5 0 1 82.525 82.525 4 4.0972E-06 31399 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.388 42.421 9.5993 0 9.6896 0 19.564 9.0357 9 0 9 0 19 9 1 0 1 0 1 1 1970.5 16495 1751 15846 38365 44461 44461 688 1 QTFLQDCEDDGETAAGGR Unmodified 1968.8119 0.81194782 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 0 2 0 1 52.744 52.744 3 0.00030488 17405 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.348 41.767 0 0 0 0 18.867 29.31 0 0 0 0 19 28 0 0 0 0 1 1 2390.2 16496 1234 15847 38366 44462 44462 1 QTFTGHESDINAICFFPNGNAFATGSDDATCR Deamidation (N) 3521.4888 0.48884613 1750 P62874;H3BKR2 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 0 1 0 0 6 0 1 77.892 77.892 4 1.0594E-37 28471 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.963 91.419 9.5374 5.4825 15.456 8.9158 0 9.594 9 6 15 9 0 9 1 1 1 1 0 1 5537.8 16497 1750 15848 38367 44463 44463 685 1 QTGSMDSDDFR Unmodified 1257.4932 0.49317986 310 A0A1L1SV25 no no 0 0 0 0 2.5 0.5 1 1 41.619 41.619 2 7.8633E-06 12784 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.184 58.441 0 29.792 0 30.275 17.475 29.349 0 28 0 28 19 28 0 1 0 1 1 1 1582 16498 310 15849 38368;38369 44464;44465 44465 2 QTIAGDFEYFLNLNSR Unmodified 1886.9163 0.91627696 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 7 0 1 91.194 91.194 3 0.0063295 33750 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.382 20.184 29.844 17.895 18.473 19.334 17.649 38.938 28 19 19 19 19 37 1 1 1 1 1 1 745.19 16499 3245 15850 38370 44466 44466 1 QTIENSQGAYQEAFDISK Unmodified 2027.9436 0.94361392 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 5.5 0.5 1 1 65.945 65.945 3 1.4429E-08 23466 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.44 82.396 78.844 72.456 57.635 0 74.438 86.354 74 74 56 0 74 83 1 2 1 0 2 2 15029 16500 1005 15851 38371;38372 44467;44468 44467 2 QTIENSQGAYQEAFDISKK Unmodified 2156.0386 0.038576936 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 6 0 1 61.774 61.774 4 0.012204 21066 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.421 19.829 128.36 79.657 0 129.09 110.18 0 120 83 0 120 111 0 1 1 0 1 1 0 15331 16501 1005 15852 38373 44469 44469 1 QTIGNSCGTIGLIHAVANNQDKLEFEDGSVLK Unmodified 3427.7042 0.70418228 3302 Q9R0P9 Uchl1 Ubiquitin carboxyl-terminal hydrolase isozyme L1 yes yes 0 0 0 1 6.67 0.471 1 2 75.132 75.132 4;5 2.8934E-10 26300 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.255 45.209 160.97 147.75 186.71 115.65 295.07 268.74 151 152 182 111 296 260 3 4 3 2 4 4 34778 16502 3302 15853 38374;38375;38376 44470;44471;44472;44473 44473 4 QTLGEGER Unmodified 888.43011 0.43010932 965 E9QN14;F8VPQ4;Q812A2;F6QZR7 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 3 0 1 29.402 29.402 2 0.018457 7091 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.16 24.448 49 25.849 38.236 0 0 39.442 46 28 37 0 0 37 1 1 1 0 0 1 5803 16503 965 15854 38377 44474 44474 1 QTLLNFFQDLHIR Unmodified 1643.8784 0.87837531 417 A0ZV96;Q8BHW2 Oscp1 Protein OSCP1 yes no 0 0 0 0 11 0 1 85.924 85.924 3 0.030939 27197 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.995 9.1881 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2310.9 16504 417 15855 38378 44475 44475 1 QTLQSATVEAIEADEAIK Unmodified 1915.9739 0.97385141 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 6 3.58 1 1 2 1 75.294 75.294 3;4 2.9599E-46 27937 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.98 102.1 332.39 187.9 197.9 441.95 174.48 190.27 311 192 198 416 178 180 5 5 6 7 4 3 133900 16505 1786 15856 38379;38380;38381;38382;38383 44476;44477;44478;44479;44480;44481;44482;44483 44479 8 QTLQSATVEAIEAEK Unmodified 1616.8257 0.82573061 811 E0CZ78;P48453 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 5.5 0.5 1 1 68.067 68.067 3 2.4241E-07 24475 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.34 82.421 118.55 94.85 92.91 138.36 121.02 174.57 111 93 92 130 121 167 2 2 2 2 2 3 17594 16506 811 15857 38384;38385 44484;44485;44486 44484 3 QTNPSAMEVEEDDPVPEIR Oxidation (M) 2170.9688 0.96884239 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 1 0 1.5 0.5 1 1 57.601 57.601 3 8.6423E-07 18473 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.047 58.456 0 0 30.296 0 48.841 29.589 0 0 28 0 47 28 0 0 2 0 2 2 4887.3 16507 1875 15858 38386;38387 44487;44488;44489 44488 157 3 QTNPSAMEVEEDDPVPEIR Unmodified 2154.9739 0.97392777 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 2 0.707 1 2 1 62.573 62.573 3;4 1.482E-19 20760 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 127.49 111.18 48.273 9 49.462 28.948 46.523 38.114 47 9 47 28 47 37 2 1 2 1 2 2 46635 16508 1875 15858 38388;38389;38390;38391 44490;44491;44492;44493;44494 44490 5 QTNPSAMEVEEDDPVPEIR Deamidation (N) 2155.9579 0.95794335 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 1 0 0 13 0 1 62.071 62.071 3 0.0042806 22175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.711 27.053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16509 1875 15858 38392 44495 44495 760 1 QTPAAPETEEEPYR Unmodified 1616.7318 0.73183023 768 D3Z3F4;F7C846;G3XA66;P47802;D3YVW0;G3UYJ5;G3XA75 Mtx1 Metaxin-1 yes no 0 0 0 0 1 0 1 42.427 42.427 3 9.7136E-09 11983 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.82 95.806 0 12.524 14.602 19.686 11.219 12.472 0 12 15 19 12 12 0 1 1 1 1 1 6119.9 16510 768 15859 38393 44496 44496 1 QTPSGTASR Unmodified 903.44101 0.44100836 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 4.5 0.5 1 1 21.174 21.174 2 0.010281 3079 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.043 22.744 0 0 14.505 14.438 0 28.924 0 0 14 14 0 28 0 0 1 1 0 2 3521.5 16511 1275 15860 38394;38395 44497;44498 44498 2 QTPTEASSSER Unmodified 1191.5368 0.53675924 746 D3Z0V7;E9QLZ1;P62500 Tsc22d1 TSC22 domain family protein 1 yes no 0 0 0 0 1.5 0.5 1 1 25.715 25.715 2 0.0037228 5204 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.979 44.741 19.282 0 5.3615 20.424 27.022 38.671 18 0 5 19 28 37 2 0 1 1 2 2 2641.1 16512 746 15861 38396;38397 44499;44500 44500 2 QTPTFWILAR Unmodified 1231.6713 0.67134264 812 E0CZE0;Q8VBW6 Nae1 NEDD8-activating enzyme E1 regulatory subunit yes no 0 0 0 0 11 0 1 76.55 76.55 2 0.05243 22958 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.872 21.555 0 76.461 136.07 0 135.98 0 0 74 130 0 130 0 0 1 1 0 1 0 7301.3 16513 812 15862 38398 44501 44501 1 QTQTFTTYSDNQPGVLIQVYEGER Unmodified 2773.3195 0.31950282 1762;1407 P63017;Q504P4;Q61696;P17879 Hspa8;Hspa1a;Hspa1b Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B no no 0 0 0 0 6.6 3.26 1 2 1 1 74.39 74.39 3;4 3.9041E-39 27941 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.65 93.796 118.06 65.612 154.34 77.021 29.288 69.29 111 65 150 75 28 65 4 2 5 3 1 2 92243 16514 1762;1407 15863 38399;38400;38401;38402;38403 44502;44503;44504;44505;44506;44507 44507 6 QTSLADLEQK Unmodified 1131.5772 0.57716749 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 5 0 1 55.64 55.64 2 0.017948 18688 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.255 20.546 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 1505 16515 1275 15864 38404 44508 44508 1 QTSLDCGILITWTK Unmodified 1634.8338 0.83379288 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 10.7 1.7 1 1 1 79.57 79.57 3 0.00054833 30590 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.511 45.672 177.54 231.35 147.34 169.07 304.45 229.01 167 231 148 166 306 222 3 4 2 3 4 3 19561 16516 1055 15865 38405;38406;38407 44509;44510;44511;44512 44512 4 QTSQQPAGPPAQQRPPPQGGPPQPGPGPQR Unmodified 3037.5231 0.52306228 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 6.6 3.26 1 2 1 1 37.012 37.012 4;5 1.2048E-31 9808 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.652 84.231 29.905 52.554 95.783 50.841 104.58 112.41 28 52 93 50 103 108 1 4 5 4 5 5 43379 16517 1282 15866 38408;38409;38410;38411;38412 44513;44514;44515;44516;44517;44518;44519 44515 7 QTTAAAAATFSEQVGGGSGGAGR Unmodified 2050.9668 0.96680898 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 6.4 3.88 1 1 1 1 1 53.115 53.115 3 8.1975E-55 16868 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.35 145.51 94.999 81.535 248.45 123.25 161.7 140.4 89 79 241 121 163 134 4 3 7 5 6 4 97147 16518 1282 15867 38413;38414;38415;38416;38417 44520;44521;44522;44523;44524;44525;44526;44527 44524 8 QTTAPATMSTAASGTTMGLVEQAK Unmodified 2352.1301 0.13011083 1475 P28652;Q5SVJ0;Q5SVI3 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 6 0 1 65.385 65.385 3 1.7029E-10 22582 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.309 53.999 29.952 18.196 0 0 0 0 28 19 0 0 0 0 1 1 0 0 0 0 5249.4 16519 1475 15868 38418 44528 44528 1 QTTQYPEANALVR Unmodified 1489.7525 0.75250609 1877 Q02105 C1qc Complement C1q subcomponent subunit C yes yes 0 0 0 0 5 0 1 49.82 49.82 2 0.034364 15933 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.44 17.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1320.9 16520 1877 15869 38419 44529 44529 1 QTTVSNSQQAYQEAFEISK Unmodified 2158.0178 0.017841494 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 6.83 2.91 1 1 2 1 1 65.037 65.037 3 1.2086E-19 22691 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.74 111.99 157.34 174.35 240.39 245.46 277.2 165.33 148 177 241 241 279 158 4 4 4 5 6 4 95950 16521 2944 15870 38420;38421;38422;38423;38424;38425 44530;44531;44532;44533;44534;44535;44536;44537 44531 8 QTTVSNSQQAYQEAFEISK Deamidation (N) 2159.0019 0.0018570786 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 1 0 0 4.25 0.433 3 1 67.937 67.937 3;4 1.2044E-07 24527 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.586 57.267 69.605 96.936 0 51.212 36.428 87.68 65 93 0 47 37 83 2 3 0 2 2 2 18867 16522 2944 15870 38426;38427;38428;38429 44538;44539;44540;44541 44540 1030 4 QTVAVGVIK Unmodified 913.55967 0.55966693 1729;1341 P10126;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 9.25 2.28 1 1 1 1 53.65 53.65 2;3 0.00020942 16281 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 130.66 66.391 709.58 646.69 969.99 542.88 272.24 541.22 668 668 958 549 278 515 4 6 6 5 2 3 137380 16523 1341;1729 15871 38430;38431;38432;38433 44542;44543;44544;44545;44546;44547 44542 6 QTVEQVQK Unmodified 958.50836 0.50835964 2303 Q80TL4;S4R193;S4R202;S4R2C8 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 5 0 1 38.946 38.946 2 0.049563 10677 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.816 18.735 0 0 0 29.362 66.01 18.37 0 0 0 28 65 19 0 0 0 1 1 1 2175.2 16524 2303 15872 38434 44548 44548 1 QTYFLPVIGLVDAEK Unmodified 1691.9134 0.91342341 463;14 A0A087WPH7;F6Q2E3;A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A no no 0 0 0 0 8 0 1 92.273 92.273 3 0.00077374 33510 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.09 36.533 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16525 14;463 15873 38435 44549 44549 1 QVAEAYEVLSDAK Unmodified 1421.7038 0.70382456 93 A0A0G2JER9;O54946;G3X8S5 Dnajb6 DnaJ homolog subfamily B member 6 yes no 0 0 0 0 5 1 1 1 68.876 68.876 3 0.0041399 24869 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.843 31.6 129.06 50.815 86.209 0 77.404 39.442 121 56 83 0 74 37 2 1 1 0 1 1 4628.5 16526 93 15874 38436;38437 44550;44551 44550 2 QVAEEAAR Unmodified 872.43519 0.4351947 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 28.671 28.671 2 0.0044713 6474 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 117.89 52.638 39.346 50.988 37.255 37.072 61.057 0 37 51 37 37 60 0 1 2 1 2 2 0 11580 16527 3266 15875 38438;38439 44552;44553 44552 2 QVAEQFLNMR Unmodified 1234.6128 0.61284149 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 8 0 1 64.009 64.009 3 0.013083 20479 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.452 33.676 20.078 27.967 28.177 7.6259 28.27 19.447 19 28 28 9 28 19 1 1 1 1 1 1 3816.4 16528 3117 15876 38440 44554 44554 1 QVALDTSDK Unmodified 975.48729 0.48728985 32 A0A087WSG0;A0A087WS76;A0A140LHL6;E9Q3S4 Map3k19 Mitogen-activated protein kinase kinase kinase 19 yes no 0 0 0 0 11 0 1 48.762 48.762 3 0.0033719 11066 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.563 5.6005 0 0 0 0 586.41 620.73 0 0 0 0 581 598 0 0 0 0 1 1 38677 16529 32 15877 38441 44555 44555 1 QVALWDTK Unmodified 959.50763 0.50763136 1289 O89053;G3UYK8;A0A0U1RPY8 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 8 0.816 1 1 1 61.585 61.585 2 0.0011636 19322 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.48 60.351 337.78 332.18 359.86 286.8 289.36 297.69 324 334 364 287 299 287 3 2 2 2 2 2 35325 16530 1289 15878 38442;38443;38444 44556;44557;44558 44557 3 QVAQQEAER Unmodified 1057.5152 0.51523593 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 5.5 4.39 1 1 1 1 26.57 26.57 2 3.9367E-05 5555 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 134.23 76.268 99.336 78.271 57.098 104.25 125.69 38.305 93 79 56 98 126 37 3 3 2 2 4 1 39067 16531 1788 15879 38445;38446;38447;38448 44559;44560;44561;44562 44559 4 QVAQQEAQR Unmodified 1056.5312 0.53122035 1179 O35129 Phb2 Prohibitin-2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 25.165 25.165 2 1.0076E-05 4718 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.06 100.87 118.45 63.7 55.957 96.345 85.252 49.036 111 65 55 92 83 46 4 3 2 3 2 2 16157 16532 1179 15880 38449;38450;38451;38452 44563;44564;44565;44566 44564 4 QVASMTKPTTIIEK Unmodified 1545.8436 0.84362928 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 0 0 1 8.5 0.5 1 1 56.824 56.824 3 0.00081772 17140 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.751 48.37 179.19 0 0 88.966 188.18 66.579 167 0 0 83 186 65 2 0 0 1 2 1 18238 16533 1352 15881 38453;38454 44567;44568 44567 2 QVAYIFK Unmodified 867.48544 0.48543935 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 9 0 1 63.412 63.412 2 0.027422 19526 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.407 24.968 208.45 0 132.76 153.85 0 0 195 0 130 148 0 0 1 0 1 1 0 0 13137 16534 2996 15882 38455 44569 44569 1 QVAYIYK Unmodified 883.48035 0.48035398 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 8.75 0.829 2 1 1 54.181 54.181 2;3 0.010125 13336 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.78 73.417 138.4 172.2 263.33 296.27 440.21 491.66 130 172 260 293 450 473 2 3 3 4 4 4 43474 16535 1536 15883 38456;38457;38458;38459 44570;44571;44572;44573 44573 4 QVCEIIESPLFLK Unmodified 1574.8378 0.83781563 739 O88545;D3Z0F5 Cops6 COP9 signalosome complex subunit 6 yes no 0 0 0 0 8 0 1 84.402 84.402 3 0.00046419 30081 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.275 44.742 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 2509.6 16536 739 15884 38460 44574 44574 1 QVCQLPGLFCYAQHIASIDGR Unmodified 2432.1729 0.17291912 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 9.5 0.5 1 1 80.448 80.448 3 5.8602E-11 27623 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.772 74.164 30.044 0 0 40.102 18.032 0 28 0 0 37 19 0 1 0 0 1 1 0 6252 16537 2278 15885 38461;38462 44575;44576 44575 2 QVDQLTNDK Unmodified 1059.5197 0.51965261 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 5 0 1 45.993 45.993 2 0.0029018 14045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.29 43.081 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16538 1423 15886 38463 44577 44577 1 QVDVPTLTGAFGILASHVPTLQVLR Unmodified 2631.4748 0.47482167 3060 Q9D3D9;D3Z7S4 Atp5d ATP synthase subunit delta, mitochondrial yes no 0 0 0 0 11.5 0.5 2 2 97.464 97.464 3;4 5.1474E-20 27867 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.302 75.349 9.657 0 0 9.837 0 19 9 0 0 9 0 19 1 0 0 1 0 1 15388 16539 3060 15887 38464;38465;38466;38467 44578;44579;44580;44581 44580 4 QVDVVITCTGNK Unmodified 1332.6708 0.6707503 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 7 0 1 55.607 55.607 3 0.00047358 17140 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.034 44.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16540 2298 15888 38468 44582 44582 1 QVEDDIQQLLK Unmodified 1327.6983 0.69834526 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 5.5 0.5 1 1 76.502 76.502 3 0.0010448 28427 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.262 42.658 30.044 9.576 0 29.921 36.338 58.659 28 9 0 28 37 56 1 1 0 1 1 2 4637.1 16541 1555 15889 38469;38470 44583;44584 44583 2 QVEDGEVFDFR Unmodified 1339.6044 0.60444487 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 3.5 0.5 1 1 64.175 64.175 2 0.00019045 22804 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.479 53.909 29.817 0 38.215 37.468 36.981 0 28 0 37 37 37 0 1 0 1 1 1 0 7854.1 16542 513 15890 38471;38472 44585;44586 44586 2 QVEELYQSLLELGEK Unmodified 1776.9145 0.91454562 551 A3KGU7;A3KGU9;P16546 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.33 2.62 1 1 1 94.526 94.526 2;3 6.1452E-05 34966 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.469 64.806 9 34.873 14.269 30.604 0 29.848 9 33 14 28 0 28 1 2 1 1 0 1 14764 16543 551 15891 38473;38474;38475 44587;44588;44589;44590 44588 4 QVEIAQR Unmodified 842.46102 0.46101552 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 5 0 1 36.016 36.016 2 0.048019 9233 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.072 23.317 78.895 33.094 57.083 25.273 102.56 86.618 74 37 56 28 102 84 1 1 1 1 1 1 6208.7 16544 1393 15892 38476 44591 44591 1 QVELALWDTAGQEDYDR Unmodified 2007.9174 0.91739917 1733;3254 P62746;Q9QUI0;A0A0A6YXF6;Q62159;H3BL56;A0A0G2JEP8;Q9CR99 Rhob;Rhoa;Rhoc;4930544G11Rik Rho-related GTP-binding protein RhoB;Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 0 0 0 0 4.5 0.5 1 1 75.445 75.445 2 1.558E-05 27926 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.46 57.435 0 9 0 9.837 0 20.254 0 9 0 9 0 19 0 1 0 1 0 1 3913.5 16545 1733;3254 15893 38477;38478 44592;44593 44593 2 QVENETR Unmodified 874.41446 0.41445926 2666 Q8R4U7 Luzp1 Leucine zipper protein 1 yes yes 0 0 0 0 1 0 1 22.909 22.909 2 0.02823 3845 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.696 26.724 9.5776 0 13.352 39.239 21.581 19.638 9 0 14 37 23 19 1 0 1 1 1 1 3833.6 16546 2666 15894 38479 44594 44594 1 QVEPLDPPAGSAPGER Unmodified 1618.7951 0.79509919 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 3 0 1 49.754 49.754 3 0.052475 16515 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 31.082 3.9192 20.244 28.427 0 30.604 0 39.442 19 28 0 28 0 37 1 1 0 1 0 1 4443 16547 432 15895 38480 44595 44595 1 QVEYLVNEK Unmodified 1120.5764 0.57643921 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 7 2.77 2 2 1 1 56.464 56.464 2;3 1.9788E-05 19098 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.75 92.223 475.07 335.56 654.02 391.03 575.88 623.51 446 343 639 388 584 598 5 5 6 5 6 6 94205 16548 1311 15896 38481;38482;38483;38484;38485;38486 44596;44597;44598;44599;44600;44601;44602;44603 44598 8 QVFLATWK Unmodified 991.5491 0.54910224 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 11.6 1.02 1 1 2 1 70.591 70.591 2;3 0.0012661 20339 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 140.5 74.244 1443.8 1462.4 471.21 2187.1 422.05 2018.1 1351 1472 470 2034 424 1897 3 5 3 6 3 4 289210 16549 3123 15897 38487;38488;38489;38490;38491 44604;44605;44606;44607;44608;44609 44605 6 QVFSSYTGK Unmodified 1015.4975 0.4974606 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 8.5 0.5 1 1 53.407 53.407 2;3 0.018231 15467 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.683 30.447 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 4189.4 16550 644 15898 38492;38493 44610;44611 44610 2 QVGEDCR Unmodified 862.36032 0.3603152 3317 Q9R1T4;A2A3W1 Sept6 Septin-6 yes no 0 0 0 0 2.5 0.5 1 1 24.859 24.859 2 0.0085537 4871 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.28 83.278 59.409 179.4 230.87 203.97 94.332 184.92 56 176 232 195 93 176 1 2 2 1 1 2 40153 16551 3317 15899 38494;38495 44612;44613 44612 2 QVHPDTGISSK Unmodified 1167.5884 0.58840088 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 0 7.5 2.4 1 3 1 1 1 1 36.92 36.92 2;3;4 3.5911E-09 7785 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.56 77.185 562.15 818.69 225.51 711.55 954.34 1098.5 527 808 222 669 969 1056 6 7 2 6 5 7 201880 16552 1349;1350;2541 15900 38496;38497;38498;38499;38500;38501;38502;38503 44614;44615;44616;44617;44618;44619;44620;44621;44622;44623 44621 10 QVIGTGSFFPK Unmodified 1179.6288 0.62880913 454 A2AEX8;A2AEX6;P97447;A2AEX7;A2AEY1;A2AEY2 Fhl1 Four and a half LIM domains protein 1 yes no 0 0 0 0 10.5 0.5 1 1 68.794 68.794 2;3 2.6281E-06 19423 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.096 50.352 0 59.584 0 50.278 0 0 0 56 0 46 0 0 0 1 0 1 0 0 7787.9 16553 454 15901 38504;38505 44624;44625 44625 2 QVIPIIGK Unmodified 866.55894 0.55893865 505 A2AQ43;A2AQ44;A2AQ42;A2AQ45;A2AQ41;Q80TY0 Fnbp1 Formin-binding protein 1 yes no 0 0 0 0 10 0 1 66.284 66.284 3 0.0098437 18749 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.565 9.4079 59.958 25.749 0 0 38.702 0 56 28 0 0 37 0 1 1 0 0 1 0 1512.9 16554 505 15902 38506 44626 44626 1 QVIQGLEALK Unmodified 1097.6445 0.64445919 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447 Klc1 Kinesin light chain 1 yes no 0 0 0 0 8 0 1 69.753 69.753 2 0.0086523 23228 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.056 14.71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16555 923 15903 38507 44627 44627 1 QVIQQNPALLPALLQQLGQENPQLLQQISR Unmodified 3377.8783 0.87832231 1620 Q3TN85;Q8CAP3;P54726;F6YL88 Rad23a UV excision repair protein RAD23 homolog A yes no 0 0 0 0 9 0 1 99.58 99.58 4 0.00049948 35561 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.036 32.386 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2510.3 16556 1620 15904 38508 44628 44628 1 QVLDAVYYLHR Unmodified 1375.7248 0.72483478 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 8.5 0.5 1 1 64.406 64.406 3 0.00064839 20604 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.152 40.309 39.516 75.132 56.196 46.929 0 108.73 37 74 56 46 0 102 1 2 1 1 0 2 19197 16557 2468 15905 38509;38510 44629;44630 44629 2 QVLEAVAYLHSLK Unmodified 1469.8242 0.82421447 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 11.6 1.02 1 1 2 1 75.55 75.55 3;4 2.4924E-07 22549 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.06 68.402 502.61 464.37 395.77 508.23 455.17 369.99 472 464 392 492 454 352 6 5 4 6 4 4 132380 16558 1986 15906 38511;38512;38513;38514;38515 44631;44632;44633;44634;44635;44636;44637 44633 7 QVLFSADDR Unmodified 1049.5142 0.5141733 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 52.532 52.532 2 9.3212E-12 17206 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.68 53.128 276.03 195.53 298.33 295.06 335.68 311.29 259 199 300 292 342 301 3 3 4 4 3 3 91882 16559 1308 15907 38516;38517;38518;38519;38520 44638;44639;44640;44641;44642;44643 44643 6 QVLGQMVIDEELLGDGHSYSPR Unmodified 2442.1849 0.1849236 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 5 0 1 75.677 75.677 3 0.00032639 28050 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.768 35.581 0 0 38.796 27.797 26.316 49.351 0 0 37 28 28 47 0 0 1 1 1 1 2459.1 16560 1864 15908 38521 44644 44644 1 QVLLAQAEAEK Unmodified 1198.6558 0.65575216 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 6 0 1 58.122 58.122 3 0.0049944 19203 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.471 18.168 39.184 35.779 56.651 35.854 64.356 57.86 37 37 56 37 65 56 1 1 1 1 1 1 2865.1 16561 2059 15909 38522 44645 44645 1 QVLLGDQIPK Unmodified 1109.6445 0.64445919 2081 Q60692 Psmb6 Proteasome subunit beta type-6 yes yes 0 0 0 0 8 0 1 62.513 62.513 2 0.0011411 19745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.428 49.21 0 48.944 0 0 46.477 47.71 0 46 0 0 46 46 0 1 0 0 1 1 4824.1 16562 2081 15910 38523 44646 44646 1 QVLLSAAEAAEVILR Unmodified 1581.909 0.90900673 1823 P80314;A0A1W2P8B6 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 9 0 1 93.901 93.901 2 0.0027212 33548 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.357 40.12 20.15 13.056 28.806 13.585 0 0 19 14 28 14 0 0 1 1 1 1 0 0 964.52 16563 1823 15911 38524 44647 44647 1 QVLPQPMPIKK Unmodified 1277.753 0.75296378 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 10 0 1 57.156 57.156 3 0.0094394 14726 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.149 45.535 69.404 0 57.308 65.857 94.253 0 65 0 56 65 93 0 1 0 1 1 1 0 5565.3 16564 1561 15912 38525 44648 44648 1 QVLYQQSSGHNNR Unmodified 1529.7335 0.73350198 2870 Q99M71 Epdr1 Mammalian ependymin-related protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 30.743 30.743 3 9.4844E-05 5699 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.093 77.13 0 24.235 5.0959 0 9.414 0 0 24 5 0 9 0 0 2 1 0 1 0 3327.4 16565 2870 15913 38526;38527 44649;44650 44650 2 QVNDAVAK Unmodified 843.44503 0.4450311 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 5 0 1 39.447 39.447 3 0.035022 10876 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.036 11.061 0 0 96.029 103.18 137.05 104.82 0 0 93 102 139 102 0 0 1 1 1 1 7327.1 16566 2469 15914 38528 44651 44651 1 QVPNESFFNFFSPLK Unmodified 1799.8883 0.88827129 637 B7ZNL2;Q78ZA7;A0A140LJB5;A0A140LI78 Nap1l4 Nucleosome assembly protein 1-like 4 yes no 0 0 0 0 10 0 1 92.944 92.944 3 3.9575E-05 30174 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.993 85.937 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11373 16567 637 15915 38529 44652 44652 1 QVQDESQR Unmodified 988.45739 0.4573867 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 1.5 0.5 1 1 22.875 22.875 2 0.0038903 3779 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.87 85.25 0 59.107 28.537 61.208 0 39.442 0 56 28 56 0 37 0 2 1 1 0 1 8329 16568 3266 15916 38530;38531 44653;44654 44653 2 QVQGMQSSQQR Unmodified 1275.599 0.59898234 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 0 8 3.56 1 1 1 29.517 29.517 2;3 1.8549E-08 6270 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.26 51.909 69.09 78.672 43.383 37.02 44.409 68.023 65 79 46 37 46 65 2 2 1 1 1 2 3268.5 16569 3324 15917 38532;38533;38534 44655;44656;44657 44655 3 QVQSLTCEVDALK Unmodified 1489.7446 0.74464352 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 0 5.5 0.5 1 1 67.736 67.736 3 0.00011302 23657 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.669 49.128 98.711 138.71 151.32 0 140.48 143.1 93 139 148 0 139 138 2 3 3 0 3 3 11300 16570 1423 15918 38535;38536 44658;44659;44660 44660 3 QVQVEGLSGNIK Unmodified 1270.6881 0.68811492 1104 G5E8H1 Gria2 no no 0 0 0 0 7 0 1 57.625 57.625 2 0.00020028 18146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.596 49.574 0 20.088 7.6279 20.312 0 9.594 0 19 9 19 0 9 0 1 1 1 0 1 2952.2 16571 1104 15919 38537 44661 44661 1 QVQVSFSSR Unmodified 1036.5302 0.53015772 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 46.685 46.685 2 0.019012 12363 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.933 39.709 39.701 0 0 39.373 56.767 0 37 0 0 37 56 0 1 0 0 1 1 0 3140.6 16572 570 15920 38538 44662 44662 1 QVRPVTEK Unmodified 955.54508 0.5450795 1596 P50516;D3Z1B9 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 1 9.33 2.62 1 1 1 33.542 33.542 3 0.0093316 8182 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.213 39.052 2120.8 1570.9 2369.4 1849.2 2377.8 2272 1997 1648 2363 1862 2429 2195 3 3 3 3 3 3 138970 16573 1596 15921 38539;38540;38541 44663;44664;44665 44665 3 QVSDDLTER Unmodified 1061.4989 0.49891717 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 6 4.97 1 1 1 40.655 40.655 2 6.4679E-35 12142 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 204.79 106.16 462.9 343.93 536.05 469.95 395.79 486.53 436 361 536 466 415 467 2 2 2 2 2 2 64285 16574 1788 15922 38542;38543;38544 44666;44667;44668 44666 3 QVSDLISVLR Unmodified 1128.6503 0.65027285 2135 Q8BTS0;Q61656 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 8 0 1 74.925 74.925 2 0.051165 25633 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.998 0.56821 78.578 62.429 85.664 0 94.332 85.786 74 65 83 0 93 83 1 1 1 0 1 1 4189.9 16575 2135 15923 38545 44669 44669 1 QVSIEEGER Unmodified 1045.504 0.50400254 1515 P35279;D3YV69 Rab6a Ras-related protein Rab-6A yes no 0 0 0 0 5.5 4.39 1 1 1 1 38.71 38.71 2 0.0046957 11343 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.958 34.104 207.68 116.61 187.73 159.54 104.7 78.884 195 121 185 158 102 74 3 3 3 4 1 1 27232 16576 1515 15924 38546;38547;38548;38549 44670;44671;44672;44673 44670 4 QVSLLGWSDGGITALIAAAK Unmodified 1970.0837 0.083676635 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 0 11.5 0.5 1 1 99.631 99.631 3 4.1797E-07 32812 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.76 49.821 9.5672 0 15.1 0 20.91 14.67 9 0 14 0 21 14 1 0 1 0 2 1 3276.9 16577 2636 15925 38550;38551 44674;44675 44674 2 QVSSGGVLLR Unmodified 1014.5822 0.58219329 1877 Q02105 C1qc Complement C1q subcomponent subunit C yes yes 0 0 0 0 7 0 1 47.937 47.937 2 0.0018025 13550 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.14 21.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16578 1877 15926 38552 44676 44676 1 QVSVEEAK Unmodified 888.45526 0.45526144 1784 P63321 Rala Ras-related protein Ral-A yes yes 0 0 0 0 4.5 0.5 1 1 42.44 42.44 2 0.0044152 12279 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.18 39.661 39.249 47.061 188.64 190.96 0 99.138 37 46 185 185 0 93 1 1 2 2 0 1 13807 16579 1784 15927 38553;38554 44677;44678 44678 2 QVTITGSAASISLAQYLINAR Unmodified 2176.1852 0.18518159 1668 P60335 Pcbp1 Poly(rC)-binding protein 1 yes yes 0 0 0 0 12 0 1 86.938 86.938 3 3.7349E-07 24487 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.055 35.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16580 1668 15928 38555 44679 44679 1 QVTVLELFR Unmodified 1103.6339 0.63389451 1502 P32037 Slc2a3 Solute carrier family 2, facilitated glucose transporter member 3 yes yes 0 0 0 0 10.7 1.7 1 1 1 77.889 77.889 2 0.0019304 26405 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.277 53.469 246.69 335.52 192.62 419.79 199.03 202.19 232 334 194 398 204 195 3 4 2 4 2 2 35275 16581 1502 15929 38556;38557;38558 44680;44681;44682;44683 44680 4 QVVAVTGDGTNDGPALK Unmodified 1640.837 0.836964 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 5.5 0.5 2 2 57.213 57.213 3;4 3.28E-25 19413 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.26 116.94 314.79 255.62 308.14 361.28 270.58 328.07 296 259 306 352 278 315 4 4 3 5 4 5 54500 16582 1096;1042;487;928 15930 38559;38560;38561;38562 44684;44685;44686;44687;44688 44684 5 QVVDSAYEVIK Unmodified 1249.6554 0.65541781 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 7.75 3.11 1 1 1 1 64.15 64.15 2;3 6.8203E-13 22661 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 146.16 98.965 217.36 251.98 224.48 173.19 322.03 308.75 204 251 223 168 324 296 4 4 3 3 4 4 66078 16583 1315 15931 38563;38564;38565;38566 44689;44690;44691;44692;44693 44689 5 QVVEEPSPQLPADK Unmodified 1535.7831 0.78313752 1804 P70236;A2AGS2 Map2k6 Dual specificity mitogen-activated protein kinase kinase 6 yes no 0 0 0 0 4 0 1 55.795 55.795 3 0.0014475 19057 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.656 36.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16584 1804 15932 38567 44694 44694 1 QVVLPDHFPER Unmodified 1335.6935 0.69353465 2043 Q5DTY9 Kctd16 BTB/POZ domain-containing protein KCTD16 yes yes 0 0 0 0 6 0 1 54.32 54.32 3 0.027867 17405 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.095 12.74 59.752 0 56.399 87.358 0 49.036 56 0 56 83 0 46 1 0 1 1 0 1 4802.7 16585 2043 15933 38568 44695 44695 1 QVVNFGPGPAK Unmodified 1112.5978 0.59784335 2840 Q99K85 Psat1 Phosphoserine aminotransferase yes yes 0 0 0 0 8.5 0.5 1 1 55.325 55.325 3 0.00030059 16362 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.958 59.915 89.059 67.984 70.333 215.48 117.51 214.11 83 65 74 203 120 204 1 1 1 2 1 2 17683 16586 2840 15934 38569;38570 44696;44697 44696 2 QVVPFSSSV Unmodified 948.49165 0.49164694 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 13 0 1 68.301 68.301 2 0.023567 25192 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.999 42.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16587 3307 15935 38571 44698 44698 1 QVVSGQAAK Unmodified 886.48723 0.48723027 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 10 3 1 1 36.263 36.263 2 0.0048995 8273 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.29 26.475 99.354 34.677 43.65 36.899 118.01 47.609 93 37 42 37 116 46 2 1 1 1 2 1 7859.9 16588 2295 15936 38572;38573 44699;44700 44699 2 QVVTLLNELK Unmodified 1155.6863 0.68632401 2795 Q921H8;Q8VCH0;H3BJZ9 Acaa1a;Acaa1b 3-ketoacyl-CoA thiolase A, peroxisomal;3-ketoacyl-CoA thiolase B, peroxisomal yes no 0 0 0 0 10 0 1 78.576 78.576 3 0.0013883 24344 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.03 46.648 29.502 26.656 68.582 0 0 49.036 28 28 65 0 0 46 1 1 1 0 0 1 2122 16589 2795 15937 38574 44701 44701 1 QVVVCGYGEVGK Unmodified 1293.6387 0.63872189 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 12 0 1 55.743 55.743 3 0.00068899 12463 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.924 47.034 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 2463.1 16590 2298;1040 15938 38575 44702 44702 1 QVYEEEYGSNLEDDVVGDTSGYYQR Unmodified 2914.2417 0.24170601 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 2.33 0.943 1 2 71.202 71.202 3;4 3.754E-23 26418 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.387 92.111 20.387 20.216 0 0 43.702 0 19 19 0 0 42 0 1 1 0 0 3 0 14984 16591 1577 15939 38576;38577;38578 44703;44704;44705 44705 3 QWELLLEK Unmodified 1057.5808 0.5807963 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 78.839 78.839 2 0.0033067 26752 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.86 60.38 345.04 205.99 264.83 119.24 426.36 96.188 324 212 250 111 416 93 4 3 2 1 4 1 71862 16592 551 15940 38579;38580;38581;38582 44706;44707;44708;44709 44708 4 QWFVNITDIK Unmodified 1262.6659 0.66592292 2413 Q8BIJ6;E9PWN2;E9PWN3 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 0 10 0 1 81.986 81.986 3 0.0049137 25877 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.37 27.498 29.679 27.151 38.255 0 47.137 28.503 28 28 37 0 46 28 1 1 1 0 1 1 4222.4 16593 2413 15941 38583 44710 44710 1 QWILNQPGEVTLIR Unmodified 1665.9202 0.92024012 3407 yes no 0 0 0 0 9 0 1 97.807 97.807 3 0.0028081 34999 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.135 10.41 0 34.048 0 0 0 29.848 0 32 0 0 0 28 0 1 0 0 0 1 11828 + 16594 3407 15942 38584 44711 44711 1 QWLIDTLYAFNSGAVDR Unmodified 1967.9741 0.97412619 3352 Q9WVJ2;E9Q5I9;F6ZQQ3 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 11.5 0.5 1 1 96.553 96.553 3 0.00024154 27637 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.292 35.712 0 0 14.757 8.788 9.0103 0 0 0 14 9 9 0 0 0 1 1 1 0 1802.4 16595 3352 15943 38585;38586 44712;44713 44713 2 QWLQEVK Unmodified 929.49707 0.49706667 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 61.204 61.204 2;3 0.0052802 21467 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.942 45.696 248.53 80.96 96.925 303.28 253.8 407.43 232 83 93 286 260 389 3 1 1 3 3 4 46761 16596 1312 15944 38587;38588;38589 44714;44715;44716;44717 44717 4 QWLYLEK Unmodified 978.51747 0.51746776 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 10.7 1.7 1 1 1 69.276 69.276 2;3 0.027413 25485 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.302 44.884 137.45 234.79 167.08 97.636 206.92 136.46 129 232 166 102 204 130 2 3 2 2 2 2 25733 16597 2585 15945 38590;38591;38592 44718;44719;44720 44720 3 QYADVEGF Unmodified 927.39741 0.39741221 613 B2M1R6 Hnrnpk yes yes 0 0 0 0 4 0 1 65.342 65.342 2 0.034354 23263 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.998 58.63 20.387 0 0 0 19.197 19.706 19 0 0 0 19 19 1 0 0 0 1 1 3717.8 16598 613 15946 38593 44721 44721 1 QYDIDDAITK Unmodified 1180.5612 0.56118307 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 59.897 59.897 3 0.0023391 20719 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.574 43.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16599 3266 15947 38594 44722 44722 1 QYDPHKPISYDVFK Unmodified 1735.857 0.85697116 2498 Q91WG7;Q8C413;F2Z409 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 0 0 0 1 7 0 1 59.004 59.004 4 0.061604 18842 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.303 16.939 48.755 55.386 54.486 56.958 53.303 77.363 46 56 56 56 56 74 1 1 1 1 1 1 3123 16600 2498 15948 38595 44723 44723 1 QYETLAEMVVPR Unmodified 1434.7177 0.71770049 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 6 0 1 72.884 72.884 3 0.00010417 26160 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.365 67.832 20.387 0 0 9.4903 18.431 29.322 19 0 0 9 19 28 1 0 0 1 1 1 2171.3 16601 3376 15949 38596 44724 44724 1 QYGIIPWNAFPGK Unmodified 1489.7718 0.77178497 451 P35803;A2AEG6 Gpm6b Neuronal membrane glycoprotein M6-b no no 0 0 0 0 11 1.22 1 2 2 2 1 81.769 81.769 2;3;4 6.412E-15 25401 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 135.55 96.795 540.64 359.97 656.26 397.19 194.63 342.77 509 379 640 398 195 325 6 6 6 6 2 3 303260 16602 451 15950 38597;38598;38599;38600;38601;38602;38603;38604 44725;44726;44727;44728;44729;44730;44731;44732;44733 44729 9 QYGSETFLAK Unmodified 1142.5608 0.56078914 1543 P42932;H3BLL1;H3BKG2 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 7 0 1 58.331 58.331 2 0.0016444 18454 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.548 37.553 39.701 0 0 39.747 36.876 0 37 0 0 37 37 0 1 0 0 1 1 0 3625.9 16603 1543 15951 38605 44734 44734 1 QYKPVVYSNTIQSLAAIVR Unmodified 2149.1895 0.18953869 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 1 5.91 5.4 6 2 2 1 79.656 79.656 3;4 3.6228E-57 20712 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 172.6 139.26 784.84 691.53 1355.8 1183.4 1242.7 1170.7 739 707 1325 1178 1265 1126 9 11 9 13 12 13 421990 16604 1411 15952 38606;38607;38608;38609;38610;38611;38612;38613;38614;38615;38616 44735;44736;44737;44738;44739;44740;44741;44742;44743;44744;44745;44746;44747;44748;44749;44750;44751;44752;44753;44754;44755 44752 21 QYKPVVYSNTIQSLAAIVR Deamidation (N) 2150.1736 0.17355427 1411 P18872;D3Z2M7;F7BLT7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 1 0 1 10 0 2 78.272 78.272 3;4 0.00011934 25020 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.767 52.721 59.445 0 157.88 43.835 66.701 126.02 56 0 148 46 65 120 1 0 2 1 1 2 10649 16605 1411 15952 38617;38618 44756;44757 44757 511 2 QYPISLVLAPTR Unmodified 1356.7765 0.776536 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 10.5 0.5 1 1 73.854 73.854 2;3 0.0033197 21684 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.951 32.098 48.801 44.723 55.632 45.589 73.002 67.207 46 46 56 46 74 65 1 1 1 1 1 1 4008.4 16606 2146 15953 38619;38620 44758;44759 44759 2 QYPWGVAEVENGEHCDFTILR Unmodified 2519.154 0.15395782 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 5.5 0.5 1 1 74.033 74.033 3 6.3241E-11 27275 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.028 75.573 20.138 48.048 36.002 47.811 75.208 0 19 47 38 47 74 0 1 2 2 2 2 0 12789 16607 879 15954 38621;38622 44760;44761 44760 2 QYPWGVAEVENGEHCDFTILR Deamidation (N) 2520.138 0.1379734 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 9 4 1 1 76.515 76.515 3 2.1029E-22 28515 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.2 117.55 39.522 29.792 30.097 30.288 16.778 89.065 37 28 28 28 19 84 1 1 1 1 1 2 20384 16608 879 15954 38623;38624 44762;44763 44762 238 2 QYPWGVVQVENENHCDFVK Unmodified 2347.0692 0.069165558 112;575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46;A0A0J9YTY0;A0A0J9YUL3;Q8C1B7 Sept8;Sept11 Septin-8;Septin-11 no no 0 0 0 0 6 0.816 1 1 1 68.047 68.047 3;4 9.1458E-08 23767 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.895 67.816 59.297 64.83 121.16 125.03 0 108.73 56 65 121 121 0 102 2 2 3 3 0 2 13277 16609 575;112 15955 38625;38626;38627 44764;44765;44766 44765 3 QYPYNNLYLER Unmodified 1471.7096 0.70957864 3073 Q9D6J5 Ndufb8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial yes yes 0 0 0 0 6 0 1 59.19 59.19 2 0.023456 19720 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.751 37.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16610 3073 15956 38628 44767 44767 1 QYTGINAINQK Unmodified 1248.6463 0.64625011 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 8 0 1 51.946 51.946 3 0.00084302 14790 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.385 39.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16611 2170 15957 38629 44768 44768 1 QYTGVNAISK Unmodified 1079.5611 0.56112349 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 9.33 2.62 1 1 1 49.574 49.574 2;3 3.0825E-05 14402 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.1 66.544 176.95 229.03 288.43 167.69 330.29 57.049 167 231 287 167 325 56 2 3 3 2 3 1 23808 16612 2836 15958 38630;38631;38632 44769;44770;44771 44769 3 QYVAHILTLK Unmodified 1184.6917 0.69174374 2475 Q8BX70;A0A1L1SUY8 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 0 12 0 1 62.22 62.22 3 0.059613 14977 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.727 24.096 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16613 2475 15959 38633 44772 44772 1 QYVGFATLPNQVHR Unmodified 1628.8423 0.84232415 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 9.4 1.85 1 1 1 1 1 55.482 55.482 3 7.3543E-05 15668 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.781 75.458 98.999 102.14 70.02 73.642 101.64 115.96 93 103 69 69 102 111 2 2 2 2 2 1 67424 16614 410;3398 15960 38634;38635;38636;38637;38638 44773;44774;44775;44776;44777 44775 5 QYVYNVAK Unmodified 983.50763 0.50763136 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 8 0 1 51.039 51.039 2 0.0051541 14361 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.6 75.384 63.827 43.707 55.827 40.883 90.17 0 60 46 56 42 88 0 1 1 1 1 1 0 4982.6 16615 3202 15961 38639 44778 44778 1 RAAVAASSSS Unmodified 905.45666 0.45665842 3086 Q9D823 Rpl37 60S ribosomal protein L37 yes yes 0 0 0 1 13 0 1 23.713 23.713 2 0.0079964 3751 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.698 85.952 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 905.43 16616 3086 15962 38640 44779 44779 1 RADQLADESLESTR Unmodified 1589.7645 0.76452734 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 1 5.5 4.39 1 1 1 1 43.587 43.587 2;3 1.9447E-57 13633 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 200 160.49 296.4 190.17 157.85 116.37 350.22 276.22 278 195 157 118 349 268 5 3 4 4 5 4 163460 16617 1681 15963 38641;38642;38643;38644 44780;44781;44782;44783;44784;44785 44781 6 RAEATAASTSR Unmodified 1119.5632 0.56324876 3182 Q9ERB0 Snap29 Synaptosomal-associated protein 29 yes yes 0 0 0 1 7.33 4.03 1 1 1 20.231 20.231 3 2.8284E-08 2880 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 121.21 88.168 39.644 6.384 9.6625 15.138 14.854 4.0889 37 6 9 14 15 4 2 1 1 1 2 1 4468.3 16618 3182 15964 38645;38646;38647 44786;44787;44788 44786 3 RAEVLDSTK Unmodified 1017.5455 0.54547343 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 1 8 3.56 1 1 1 37.658 37.658 3 0.0004136 9602 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.29 55.184 463.71 380.53 188.94 119.9 443.16 484.11 435 390 185 120 436 466 3 3 1 1 2 3 97364 16619 2958 15965 38648;38649;38650 44789;44790;44791 44790 3 RANSVQAAR Unmodified 971.52608 0.52607539 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 1 6.5 0.5 1 1 18.185 18.185 3 0.0019204 2852 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.08 30.099 10.641 14.127 3.0544 11.902 12.728 9.4099 10 14 3 11 13 9 2 2 1 1 2 1 1130.1 16620 1561 15966 38651;38652 44792;44793 44793 2 RAPAFLSAEEVQDHLR Unmodified 1837.9435 0.94349476 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 1 8.33 3.35 1 2 1 2 54.221 54.221 3;4 9.4278E-08 17970 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.48 88.418 354.61 219.15 354.06 212.33 325.63 388.85 333 222 342 204 324 371 5 4 4 4 5 4 141910 16621 1223 15967 38653;38654;38655;38656;38657;38658 44794;44795;44796;44797;44798;44799 44798 6 RAPAVPPAR Unmodified 933.55083 0.55083358 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;P39053;F6RRH9;F6TH70 Dnm1 Dynamin-1 no no 0 0 0 1 7.33 0.471 2 1 28.505 28.505 3 0.0063772 4963 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.23 51.258 148.35 120.34 32.056 193.74 116.18 96.888 139 120 32 181 120 93 4 3 1 4 3 3 6741.9 16622 118;1534;988 15968 38659;38660;38661 44800;44801;44802;44803 44802 4 RAPFDLFENK Unmodified 1235.6299 0.62987176 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 1 10 1.87 1 1 1 1 64.207 64.207 2;3 2.2414E-07 20673 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.96 101.3 473.12 558.21 533.64 697.3 728.67 875.71 446 563 547 677 756 841 2 4 2 3 4 4 99639 16623 1354 15969 38662;38663;38664;38665 44804;44805;44806;44807 44804 4 RAPFDLFENR Unmodified 1263.636 0.63601977 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 9.25 2.28 1 1 1 1 60.209 60.209 2;3 2.0168E-05 20935 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.692 33.531 188.19 74.84 151.19 131.2 100.08 205.01 176 74 148 130 102 195 4 2 3 3 2 5 147190 16624 1322 15970 38666;38667;38668;38669 44808;44809;44810;44811;44812;44813;44814 44814 7 RAPSFHDK Unmodified 956.48281 0.48281359 1640 P56393 Cox7b Cytochrome c oxidase subunit 7B, mitochondrial yes yes 0 0 0 1 6 0 1 31.7 31.7 4 0.060741 6763 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.352 19.45 118.72 0 64.092 126.6 39.3 87.357 111 0 65 120 46 83 1 0 1 1 1 1 4553.3 16625 1640 15971 38670 44815 44815 1 RAQEEADAEER Unmodified 1302.58 0.58002103 1898 Q0VGU4 Vgf yes yes 0 0 0 1 13 0 1 22.35 22.35 3 0.0011786 3316 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.871 43.315 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1435.3 16626 1898 15972 38671 44816 44816 1 RATVVESSEK Unmodified 1104.5775 0.57750184 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 1 8 3.56 1 1 1 32.298 32.298 3 7.0906E-05 7490 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.56 54.664 246.95 261.12 154.68 175.55 326.12 377.73 232 261 148 167 328 361 3 3 2 2 3 3 38782 16627 1706 15973 38672;38673;38674 44817;44818;44819;44820 44820 4 RAVETTAQSDNK Unmodified 1318.6477 0.64770667 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 1 9 4 1 1 29.465 29.465 3 2.579E-18 6206 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 149.02 96.228 29.737 165.63 28.508 0 121.58 135.11 28 158 28 0 120 130 1 2 1 0 1 2 19832 16628 1596 15974 38675;38676 44821;44822 44822 2 RCEEMDR Unmodified 994.39605 0.39604877 1151 K3W4T3;Q9Z1G4;A2A599 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 1 0 1 20.715 20.715 3 0.019187 3134 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.165 52.423 44.797 0 45.218 0 46.807 38.106 42 0 42 0 46 37 1 0 1 0 1 1 7470.2 16629 1151 15975 38677 44823 44823 1 RDDAYWPEAK Unmodified 1249.5728 0.57275081 716 S4R1M2;D3YXK2 Safb Scaffold attachment factor B1 yes no 0 0 0 1 5 0 1 49.61 49.61 3 0.0099431 15882 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.84 27.777 29.749 27.346 26.335 48.708 0 39.442 28 28 28 46 0 37 1 1 1 1 0 1 2940.1 16630 716 15976 38678 44824 44824 1 RDDGSWEVIEGYR Unmodified 1580.7219 0.72193424 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 3 0 1 56.672 56.672 3 0.0028322 19807 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.918 43.551 23.606 0 0 26.879 23.694 35.568 22 0 0 25 25 34 1 0 0 1 1 1 5328.9 16631 1458 15977 38679 44825 44825 1 RDHALLEEQSK Unmodified 1324.6735 0.67352749 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 1 5 0 1 36.586 36.586 4 0.011832 9486 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.568 27.615 78.945 0 76.788 64.695 94.306 0 74 0 74 65 93 0 1 0 1 1 1 0 2921.5 16632 310 15978 38680 44826 44826 1 RDIEDPEIVVQATVL Unmodified 1695.9043 0.90431529 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 3 0 1 77.527 77.527 3 0.043861 29439 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 39.947 17.749 9.657 0 0 0 19.874 9 9 0 0 0 19 9 1 0 0 0 1 1 1665.9 16633 2587 15979 38681 44827;44828 44827 2 RDLATDLSLIEVK Unmodified 1471.8246 0.8246084 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 7 0 1 72.603 72.603 3 0.019687 25141 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.666 7.5528 60.088 0 0 0 0 69.29 56 0 0 0 0 65 1 0 0 0 0 1 2970.1 16634 1424 15980 38682 44829 44829 1 RDNEVDGQDYHFVVSR Unmodified 1934.8871 0.88710209 538 Q52KF7;A2BEE9;P70175;A2BEF2 Dlg3 Disks large homolog 3 yes no 0 0 0 1 3.5 0.5 1 1 44.912 44.912 4 0.00022086 14284 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.507 44.83 0 128.74 0 29.725 166.99 184.18 0 121 0 28 167 176 0 1 0 1 2 1 9731.8 16635 538 15981 38683;38684 44830;44831 44830 2 RDNPEEEYGYEDLR Unmodified 1783.7649 0.76492127 1137 J3KMK0;L7N209;Q3TGM7;Q69ZS7 Gm9923;Hbs1l HBS1-like protein yes no 0 0 0 1 1 0 1 45.711 45.711 3 2.9295E-21 13420 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 136.6 124.7 20.181 18.538 18.956 8.7072 0 29.848 19 19 19 9 0 28 1 1 1 1 0 1 2246.3 16636 1137 15982 38685 44832 44832 1 RDPHLACVAYER Unmodified 1485.7147 0.7146808 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 6.17 3.13 2 2 1 1 36.426 36.426 3;4 1.2555E-05 10039 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.161 69.472 427.03 443.9 144.43 322.21 408.53 571.55 400 445 139 300 419 545 5 7 3 4 6 5 86082 16637 2185 15983 38686;38687;38688;38689;38690;38691 44833;44834;44835;44836;44837;44838;44839;44840;44841 44835 9 RDPQELYDVYCFAR Unmodified 1830.8359 0.83591814 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 1 6 0 1 63.243 63.243 3 6.5855E-22 21625 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 141.87 135.1 38.965 55.677 76.531 0 48.116 0 37 56 74 0 46 0 1 1 1 0 1 0 13742 16638 144 15984 38692 44842 44842 1 RDPTANEDPEWILVEK Unmodified 1910.9374 0.93740633 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 1 4.33 0.471 2 1 67.068 67.068 3;4 0.00022363 23912 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.107 35.418 39.701 0 29.01 59.479 0 29.848 37 0 28 56 0 28 1 0 1 2 0 1 7860.5 16639 2442 15985 38693;38694;38695 44843;44844;44845 44845 3 RDQALTEEHAR Unmodified 1324.6484 0.64837537 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 6 4.97 1 1 1 23.809 23.809 3;4 5.5607E-06 4570 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 105.36 82.866 59.391 113.64 111.03 115.62 99.972 117.35 56 112 112 112 102 112 1 3 3 3 2 3 21297 16640 418 15986 38696;38697;38698 44846;44847;44848;44849 44846 4 RDTAGDASESALLK Unmodified 1432.7158 0.71578623 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 1 5 0 1 46.279 46.279 3 0.0064063 14160 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.577 25.93 78.694 53.04 74.027 55.26 81.65 76.554 74 56 74 56 83 74 1 1 1 1 1 1 4883.5 16641 2253 15987 38699 44850 44850 1 RDVAGDASESALLK Unmodified 1430.7365 0.73652168 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 4.33 0.471 2 1 50.531 50.531 3;4 3.2737E-07 16516 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.68 81.044 460.44 315.63 253.25 396.77 359.27 551.53 432 326 256 383 379 527 3 2 1 3 3 3 38054 16642 106 15988 38700;38701;38702 44851;44852;44853 44851 3 RDVDFELIK Unmodified 1133.6081 0.60807369 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 1 7 0 1 40.528 40.528 4 0.060467 10162 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.086 0.89502 207.2 259.74 302.64 192.44 315.46 242.57 196 262 303 198 318 236 1 1 1 1 1 1 15229 16643 1825 15989 38703 44854 44854 1 RDYEVDGR Unmodified 1008.4625 0.46247208 690;767 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2;D3YWU0;D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg2;Dlg1 Disks large homolog 2;Disks large homolog 1 no no 0 0 0 1 2.5 0.5 1 1 28.414 28.414 3 0.0020568 6409 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.12 59.529 206.35 191.19 142.11 119.14 248.14 229.57 194 195 139 111 250 222 2 2 1 1 2 2 32681 16644 690;767 15990 38704;38705 44855;44856 44855 2 REDLLNNVAR Unmodified 1198.6418 0.64183343 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 1 7.25 3.34 2 1 1 42.787 42.787 2;3 5.996E-05 12109 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.08 58.734 286.58 168.6 202.65 131.23 324.05 175.41 269 176 196 121 314 166 3 2 1 2 2 2 40499 16645 1702 15991 38706;38707;38708;38709 44857;44858;44859;44860 44859 4 REDLVEEIR Unmodified 1157.6041 0.60405094 2105 Q61035 Hars Histidine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 3 0 1 45.455 45.455 3 0.00022738 14586 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.68 46.193 88.661 36.052 36.328 99.484 0 59.696 83 37 37 93 0 56 2 1 1 2 0 2 8310 16646 2105 15992 38710 44861;44862 44861 2 REDSFTFIPR Unmodified 1266.6357 0.63568542 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 1 6 0 1 54.234 54.234 3 0.0067384 17341 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.815 29.881 50.201 45.559 0 0 38.702 0 47 46 0 0 37 0 1 1 0 0 1 0 3573.7 16647 1036 15993 38711 44863 44863 1 REEAAVDAQQQK Unmodified 1371.6743 0.67425577 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 3 0 1 32.545 32.545 3 1.2433E-15 8542 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 142.51 93.008 0 39.368 0 0 56.581 58.081 0 37 0 0 56 56 0 1 0 0 1 1 5561.2 16648 3266 15994 38712 44864 44864 1 REEEEFNTGPLSVLTQSVK Unmodified 2162.0855 0.085527128 1723 P62317 Snrpd2 Small nuclear ribonucleoprotein Sm D2 yes yes 0 0 0 1 6 0 1 73.393 73.393 3 2.6368E-07 26401 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.088 56.078 0 29.344 26.805 38.843 0 0 0 28 28 37 0 0 0 1 1 1 0 0 2403.7 16649 1723 15995 38713 44865 44865 1 REELITNWEQIR Unmodified 1585.8213 0.82125436 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7 3.54 1 1 1 1 58.923 58.923 3 3.0139E-27 20357 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 177.41 139.04 257.69 330.78 394.92 412.38 362.09 519.47 242 329 397 403 372 497 3 3 3 3 2 4 131650 16650 551 15996 38714;38715;38716;38717 44866;44867;44868;44869 44867 4 REESLGEAR Unmodified 1045.5152 0.51523593 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 1.5 0.5 1 1 25.816 25.816 3 0.00047555 5301 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.47 52.244 39.701 0 49.772 30.604 75.428 57.544 37 0 46 28 74 56 1 0 1 1 1 1 4609.5 16651 2186 15997 38718;38719 44870;44871 44871 2 REEVLEEGAK Unmodified 1158.5881 0.58806652 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 3 0.816 1 1 1 40.457 40.457 3;4 2.374E-09 11531 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.47 81.632 59.456 170.46 192.61 152.02 67.67 0 56 167 194 148 65 0 2 3 3 2 2 0 30159 16652 510 15998 38720;38721;38722 44872;44873;44874 44874 3 REEVNQR Unmodified 929.46789 0.46789181 687 D3YUV1;Q99J45 Nrbp1 Nuclear receptor-binding protein yes no 0 0 0 1 2.5 0.5 1 1 17.874 17.874 3 0.014623 2720 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.323 38.528 3.1627 0 9.455 5.9945 0 12.792 3 0 9 6 0 12 1 0 1 1 0 1 672.95 16653 687 15999 38723;38724 44875;44876 44875 2 REISYAIK Unmodified 978.54983 0.54983053 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3;G3UXX2 Dnm1;Dnm3;Dnm2 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 1 7.5 0.5 1 1 45.209 45.209 3 0.016507 12382 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.908 14.179 60.088 135.88 146.14 252.56 113.82 303.76 56 130 148 241 120 288 1 1 1 2 1 2 19278 16654 118;1534;960;1082 16000 38725;38726 44877;44878 44877 2 RELDDLEQWIQER Unmodified 1728.8431 0.84311201 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 4 0 1 75.778 75.778 3 0.059806 28045 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.801 17.197 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 1935.4 16655 2186 16001 38727 44879 44879 1 RELEEEK Unmodified 931.46108 0.4610751 548 A2TJV2 Palm3 Paralemmin-3 yes yes 0 0 0 1 13 0 1 30.607 30.607 3 0.053475 6880 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.567 0 0 107.06 88.107 136.84 0 127.92 0 102 93 130 0 120 0 1 1 1 0 1 8857.7 16656 548 16002 38728 44880 44880 1 REPEDAELVR Unmodified 1212.6099 0.6098646 1233 O55074;Q7TN79 Akap7 A-kinase anchor protein 7 isoform alpha;A-kinase anchor protein 7 isoform gamma yes no 0 0 0 1 1.5 0.5 1 1 36.166 36.166 3 1.613E-05 9385 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.734 29.077 69.516 45.321 0 0 0 0 65 47 0 0 0 0 2 2 0 0 0 0 3155.1 16657 1233 16003 38729;38730 44881;44882;44883 44881 3 REPLPSLEAVYLITPSEK Unmodified 2041.1096 0.10955703 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 1 8.4 2.42 1 1 2 1 75.191 75.191 3;4 2.0571E-07 28265 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.674 61.595 275.63 309.92 389.1 536.26 473.65 287.63 259 306 397 520 482 278 4 4 6 7 6 5 125350 16658 1160 16004 38731;38732;38733;38734;38735 44884;44885;44886;44887;44888;44889;44890 44890 7 REPLPSR Unmodified 853.477 0.47699993 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;A0A0R4J1I0;Q8C796;Q9WV02;A2AFI3 Rbmxl1;Rbmx;Rcor2 RNA binding motif protein, X-linked-like-1;REST corepressor 2;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 1 4 0 1 27.028 27.028 3 0.014004 5549 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.294 53.045 0 77.658 64.479 26.761 0 59.696 0 74 65 28 0 56 0 1 1 1 0 1 4470 16659 385;3339 16005 38736 44891 44891 1 REPVGNDVATILSR Unmodified 1525.8213 0.82125436 2716 Q8VHI6 Wasf3 Wiskott-Aldrich syndrome protein family member 3 yes yes 0 0 0 1 5.5 0.5 1 1 53.873 53.873 3 0.00019675 17158 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.532 70.821 29.747 66.707 26.775 99.219 44.361 58.43 28 65 28 93 46 56 1 2 1 2 1 2 9557.5 16660 2716 16006 38737;38738 44892;44893 44893 2 REYEIDGR Unmodified 1036.4938 0.49377221 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5 Dlg4 Disks large homolog 4 yes no 0 0 0 1 3.5 0.5 1 1 32.4 32.4 3 0.0075835 7899 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.615 55.888 217.44 24.966 222.57 118.99 132.55 214.79 204 28 213 120 139 204 2 1 2 1 2 1 24420 16661 407 16007 38739;38740 44894;44895 44895 2 RFDDAVVQSDMK Unmodified 1409.6609 0.66091389 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 9.25 3.77 1 1 2 51.159 51.159 3;4 2.8704E-15 16032 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 141.34 108.29 435.86 356.36 211.89 509.94 284.4 702.91 408 352 213 483 297 667 4 3 2 5 3 5 95458 16662 1762 16008 38741;38742;38743;38744 44896;44897;44898;44899;44900 44897 5 RFDEAALSIQK Unmodified 1276.6776 0.67755023 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 1 7 0 1 56.077 56.077 3 2.4482E-08 17380 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.38 57.297 0 76.507 133.33 61.39 90.813 106.14 0 74 130 65 93 102 0 1 1 1 1 1 14781 16663 775 16009 38745 44901 44901 1 RFDEAIK Unmodified 877.46577 0.46576654 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 1 9.33 2.62 1 1 1 43.957 43.957 3 0.012547 11855 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.6 32.814 337.4 293.08 488.35 263.17 524.63 483.92 318 303 480 259 529 468 2 2 3 2 3 3 49168 16664 1568 16010 38746;38747;38748 44902;44903;44904 44902 3 RFDEILEASDGIMVAR Unmodified 1820.9091 0.90908309 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 1 7.5 3.2 1 2 1 73.801 73.801 2;3 3.1288E-05 27746 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.735 44.046 90.132 154.71 229.08 178.05 158.92 135.1 84 149 223 177 158 130 2 3 2 4 3 3 88838 16665 1609 16011 38749;38750;38751;38752 44905;44906;44907;44908;44909;44910 44910 6 RFDGVQDPR Unmodified 1088.5363 0.53630573 1228 O55022 Pgrmc1 Membrane-associated progesterone receptor component 1 yes yes 0 0 0 1 13 0 1 35.339 35.339 3 0.025337 9137 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.013 36.179 0 503.17 324.39 420.05 0 0 0 478 345 402 0 0 0 1 1 1 0 0 10190 16666 1228 16012 38753 44911 44911 1 RFEELGVK Unmodified 976.53418 0.53418046 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 1 7 0 1 49.225 49.225 3 0.0069451 14150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.882 37.437 286.15 0 237.21 204.9 441.45 273.09 268 0 229 208 440 268 1 0 1 1 1 1 23441 16667 2897 16013 38754 44912 44912 1 RFLFPFFDSAYQGFASGDLEK Unmodified 2441.1692 0.16919718 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 1 11.8 0.829 2 1 1 92.867 92.867 3;4 1.1028E-10 36964 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.975 50.286 138.8 62.796 92.665 85.229 56.386 128.99 130 65 93 84 56 121 3 2 3 3 1 3 15068 16668 1311 16014 38755;38756;38757;38758 44913;44914;44915;44916;44917;44918 44918 6 RFNDGTDEK Unmodified 1080.4836 0.48360145 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 5 0.816 1 1 1 34.343 34.343 3 0.0012677 8349 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.791 44.499 344.46 311.64 348.53 168.96 507.53 315.86 324 316 343 176 503 306 3 3 3 2 4 2 57791 16669 1881 16015 38759;38760;38761 44919;44920;44921;44922 44920 4 RFPAFGFGAR Unmodified 1124.5879 0.58794737 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 1 8.67 5.44 1 1 1 57.003 57.003 3 1.874E-07 18516 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.08 96.187 127.08 193.93 385.06 91.666 264.26 176.75 120 195 371 93 259 167 2 4 5 2 3 3 125390 16670 3371 16016 38762;38763;38764 44923;44924;44925;44926;44927 44924 5 RFPLHPLTGPR Unmodified 1289.7357 0.73567424 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;S4R2K2 Anks1b yes no 0 0 0 1 1 0 1 44.59 44.59 4 0.050553 12823 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 37.18 25.812 0 0 0 30.098 26.907 29.08 0 0 0 28 28 28 0 0 0 1 1 1 2533.9 16671 3447 16017 38765 44928 44928 1 RFPVAPLIPYPLITK Unmodified 1724.0389 0.038898694 629 S4R2B0;B2RY56 Rbm25 RNA-binding protein 25 yes no 0 0 0 1 1 0 1 83.008 83.008 3 0.00047437 29134 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.173 48.85 26.703 10.778 11.326 19.689 21.433 19.642 25 12 12 19 22 19 1 1 1 1 1 1 3577.2 16672 629 16018 38766 44929 44929 1 RFQLMLSAQGVDPGLAK Oxidation (M) 1845.9771 0.97710307 2880 Q99N42 Tymp Thymidine phosphorylase yes yes 0 0 1 1 7 0 1 71.217 71.217 3 0.026535 24550 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.024 8.7473 187 0 310.67 0 210.9 255.15 176 0 288 0 210 245 1 0 1 0 1 1 61735 16673 2880 16019 38767 44930 44930 188 1 RFQSVPAQPGQTSPLLQYFGILLDQGQLNK Unmodified 3342.7725 0.77246026 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 12 0.707 1 2 1 95.176 95.176 4;5 1.7454E-05 38028 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.336 33.333 9.657 5.32 0 15.302 28.281 54.894 9 5 0 14 28 52 1 1 0 1 2 2 13734 16674 2185 16020 38768;38769;38770;38771 44931;44932;44933;44934 44934 4 RFTMELAK Unmodified 994.52699 0.52698659 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 1 13 0 1 52.033 52.033 3 0.011979 17224 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.17 40.874 0 77.216 90.923 113.82 110.88 0 0 74 93 111 111 0 0 1 1 1 1 0 17386 16675 1458 16021 38772 44935 44935 1 RFVGHTK Unmodified 843.47152 0.47152062 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 1 10 0 1 29.36 29.36 3 0.054309 4292 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.265 22.285 29.772 17.694 30.791 58.832 28.748 58.876 28 19 32 56 32 56 1 1 1 1 1 1 878.32 16676 1792 16022 38773 44936 44936 1 RGAEAEAR Unmodified 858.43078 0.43077802 3404 Q9Z315 Sart1 U4/U6.U5 tri-snRNP-associated protein 1 yes yes 0 0 0 1 2 0 1 16.145 16.145 3 0.0062414 2576 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.15 10.682 4.2489 3.9036 3.9409 2.951 4.9529 4.1227 4 4 4 3 5 4 1 1 1 1 1 1 641.98 16677 3404 16023 38774 44937 44937 1 RGDFIPGLR Unmodified 1029.572 0.57196295 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 8.5 0.5 1 1 49.968 49.968 3 0.00048598 13877 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.66 55.114 158.06 69.659 65.554 71.045 0 0 148 74 65 65 0 0 2 1 1 1 0 0 29216 16678 1520 16024 38775;38776 44938;44939 44938 2 RGDGADPEGEGVTLQR Unmodified 1655.7863 0.78632542 3369 Q9Z127 Slc7a5 Large neutral amino acids transporter small subunit 1 yes yes 0 0 0 1 3 0 1 37.636 37.636 3 0.0016081 10966 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.953 26.376 14.877 28.789 0 24.723 22.102 23.887 14 28 0 23 23 23 1 1 0 1 1 1 3266.5 16679 3369 16025 38777 44940 44940 1 RGDPHELR Unmodified 978.49953 0.49952629 2396 Q8BH59;V9GXX9 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 1 3 0 1 21.106 21.106 3 0.010176 3448 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.264 46.043 0 0 38.36 37.576 30.751 28.971 0 0 37 37 32 28 0 0 1 1 1 1 2534.8 16680 2396 16026 38778 44941 44941 1 RGDQGPK Unmodified 756.38785 0.38785057 119 A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6 Eif4g1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 1 6 0 1 23.75 23.75 3 0.04149 3665 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.915 37.625 12.746 25.741 0 36.482 36.146 25.619 12 25 0 34 37 25 1 1 0 1 1 1 1489.1 16681 119 16027 38779 44942 44942 1 RGEAHLAVNDFDLAR Unmodified 1682.8489 0.84886609 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 1 5 0 1 50.119 50.119 4 0.0008406 16064 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.148 40.924 0 0 37.918 47.508 27.106 0 0 0 37 46 28 0 0 0 1 1 1 0 2801.7 16682 1491 16028 38780 44943 44943 1 RGEVPAELR Unmodified 1025.5618 0.56179219 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 1 3 0 1 35.742 35.742 3 0.040704 10005 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.276 24.834 20.387 0 0 20.767 0 29.848 19 0 0 19 0 28 1 0 0 1 0 1 2403.4 16683 3000 16029 38781 44944 44944 1 RGFGFVTFDDHDPVDK Unmodified 1850.8588 0.85876208 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 1 13 0 1 61.315 61.315 4 0.0034105 21817 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.294 27.895 59.372 43.545 83.513 75.905 0 108.73 56 46 83 74 0 102 1 1 1 1 0 1 5109.8 16684 1271 16030 38782 44945 44945 1 RGFSEEQLR Unmodified 1120.5625 0.56252048 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 1 9 4 1 1 35.158 35.158 3 0.0005551 9047 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.18 40.713 0 97.274 100.37 93.258 128.09 105.08 0 93 102 93 130 102 0 1 1 1 1 1 6882.6 16685 3315 16031 38783;38784 44946;44947 44947 2 RGGELPGSR Unmodified 927.48863 0.48862725 2303 Q80TL4;S4R193;S4R202 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 1 5 0 1 25.539 25.539 3 0.015946 4496 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.908 22.563 0 0 0 0 46.477 47.71 0 0 0 0 46 46 0 0 0 0 1 1 2672.4 16686 2303 16032 38785 44948 44948 1 RGGPNYQEGLR Unmodified 1245.6214 0.62143234 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 1 13 0 1 30.927 30.927 3 7.9303E-08 7045 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.39 75.302 0 47.979 57.713 0 66.371 47.142 0 46 56 0 65 46 0 1 1 0 1 1 3402.8 16687 2020 16033 38786 44949 44949 1 RGGTWFAGFGR Unmodified 1210.5996 0.59957468 680 D3YUM1;Q91YT0;D3Z1U9 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 1 12 0 1 55.1 55.1 3 2.3437E-05 12239 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.09 69.474 0 67.593 93.717 64.059 74.461 0 0 65 93 65 74 0 0 1 1 1 1 0 14355 16688 680 16034 38787 44950 44950 1 RGILTLK Unmodified 799.52797 0.52797287 1673;1781;1791;2366 P60710;E9Q5F4;G3UZ07;E9Q606;P63260;G3UYG0;P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 1 9.25 4.82 1 1 1 1 49.629 49.629 3 0.0059919 11323 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.29 31.968 2365.9 2237 3231 2518.8 2301.4 2134.4 2231 2299 3223 2506 2374 2045 5 6 6 5 5 5 1215100 16689 1673;1781;1791;2366 16035 38788;38789;38790;38791 44951;44952;44953;44954;44955;44956;44957 44953 7 RGNNTTSLLSQSVAK Deamidation (N) 1575.8216 0.82164829 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 1 0 1 7 0 1 52.293 52.293 3 0.016916 15637 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.66 42.828 33.851 36.237 50.775 46.288 51.22 0 32 37 51 46 51 0 1 1 1 1 1 0 4461.2 16690 3117 16036 38792 44958 44958 1084 1 RGNVAGDSK Unmodified 902.45699 0.45699277 1341 P10126 Eef1a1 Elongation factor 1-alpha 1 yes yes 0 0 0 1 13 0 1 25.142 25.142 3 0.0016473 4326 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.469 43.6 108.88 0 95.131 111.04 245.3 171.02 102 0 93 111 245 167 1 0 1 1 1 1 8310.9 16691 1341 16037 38793 44959 44959 1 RGNVCGDSK Unmodified 991.45053 0.45052719 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 1 8 3.08 1 1 1 1 25.715 25.715 3 0.0018425 4329 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.008 52.265 39.354 19.766 85.262 95.207 81.259 130.93 37 19 84 93 83 125 1 1 2 2 2 3 11060 16692 1729 16038 38794;38795;38796;38797 44960;44961;44962;44963 44961 4 RGPFELEAFYSDPQGVPYPEAK Unmodified 2496.1961 0.19614021 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 1 7 0 1 74.671 74.671 3 0.00037014 26085 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.656 26.853 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1940.4 16693 2137 16039 38798 44964 44964 1 RGPLGPNWK Unmodified 1023.5614 0.56139826 1615 Q8JZZ5;P53811 Pitpnb Phosphatidylinositol transfer protein beta isoform yes no 0 0 0 1 11 0 1 46.244 46.244 3 0.01013 10106 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.156 44.498 0 0 65.456 36.54 0 62.894 0 0 62 37 0 59 0 0 1 1 0 1 3258.7 16694 1615 16040 38799 44965 44965 1 RGPPPPPR Unmodified 872.49807 0.49806973 385 A0A2I3BRL8;Q91VM5 Rbmxl1 RNA binding motif protein, X-linked-like-1 yes no 0 0 0 1 6.5 0.5 1 1 23.193 23.193 3 0.016846 3495 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.525 44.083 0 54.264 0 95.573 90.597 66.705 0 51 0 89 93 65 0 2 0 2 2 2 3968.9 16695 385 16041 38800;38801 44966;44967 44966 2 RGQILWFR Unmodified 1074.6087 0.60868281 1042;1096;487;333 G5E829;A0A1W2P6X7;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;A0A1W2P882 Atp2b1;Atp2b2;Atp2b3 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 1 7 6 1 1 56.339 56.339 3 0.0055174 19048 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.909 61.085 118.28 109.36 45.767 98.244 36.011 88.516 111 111 46 93 37 84 2 2 1 2 1 2 8915.4 16696 1096;1042;487;333 16042 38802;38803 44968;44969 44969 2 RGQPLLVFR Unmodified 1084.6505 0.65054762 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 1 11 0 1 49.674 49.674 3 0.0055088 11464 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.376 50.404 60.088 0 0 61.208 0 0 56 0 0 56 0 0 1 0 0 1 0 0 7663 16697 2138 16043 38804 44970 44970 1 RGQSSAPPTR Unmodified 1055.5472 0.54720476 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 1 5.5 0.5 1 1 17.585 17.585 3 0.00019611 2593 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.756 49.05 10.648 7.8694 9.2865 7.4137 6.0861 5.33 10 8 9 7 6 5 3 2 3 2 2 1 2079.7 16698 1901 16044 38805;38806 44971;44972;44973;44974 44974 4 RGSDELTVPR Unmodified 1128.5887 0.58873523 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 1 4 0 1 35.891 35.891 3 3.0812E-05 9604 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.31 74.391 0 48.944 0 40.441 0 49.036 0 46 0 37 0 46 0 1 0 1 0 1 2990 16699 573 16045 38807 44975 44975 1 RGSDELYAIK Unmodified 1150.5982 0.59823728 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 1 6 1 1 1 48.567 48.567 3 2.2638E-05 15386 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.77 73.254 118.08 109.89 78.715 87.608 137.44 114.4 111 112 83 83 139 111 2 2 2 1 2 2 10329 16700 1783 16046 38808;38809 44976;44977 44976 2 RGSLGFYK Unmodified 926.4974 0.49740102 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 10 0 1 45.974 45.974 3 0.044833 10113 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.258 22.742 198 229.3 250.93 229.55 249.79 277.49 187 232 255 228 258 267 1 1 1 1 1 1 12204 16701 2186 16047 38810 44978 44978 1 RGSSGETLR Unmodified 961.49411 0.49410656 2012 Q3UVX5 Grm5 Metabotropic glutamate receptor 5 yes yes 0 0 0 1 5 0 1 20.376 20.376 3 0.019336 2880 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.398 17.152 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16702 2012 16048 38811 44979 44979 1 RGTEHSGSTVPSILNR Unmodified 1709.8809 0.8808945 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 1 6 0 1 37.389 37.389 4 0.00038178 9391 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.997 46.671 39.468 46.283 0 0 0 69.29 37 46 0 0 0 65 1 1 0 0 0 1 4803.3 16703 1151 16049 38812 44980 44980 1 RGTGGVDTAATGSVFDISNLDR Unmodified 2208.0771 0.077087707 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 1 9.5 3.5 1 1 63.18 63.18 3 1.5653E-21 21718 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.74 93.64 33.908 124.12 75.924 43.453 0 142.84 32 120 79 42 0 134 1 2 2 1 0 2 32737 16704 1490 16050 38813;38814 44981;44982 44981 2 RGTGGVDTAAVGGVFDVSNADR Unmodified 2120.0247 0.024658206 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 7.57 3.54 1 2 1 1 2 56.557 56.557 3;4 5.3507E-43 17680 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.05 85.713 345.1 388.27 350.26 279.53 391.77 250.62 325 391 353 270 383 241 5 6 5 6 5 2 148280 16705 1883 16051 38815;38816;38817;38818;38819;38820;38821 44983;44984;44985;44986;44987;44988;44989;44990;44991 44989 9 RGTGGVDTAAVGGVFDVSNADR Deamidation (N) 2121.0087 0.008673791 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 1 0 1 4 0 1 58.579 58.579 3 0.0055451 20391 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.055 34.464 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2760.9 16706 1883 16051 38822 44992 44992 774 1 RGWDENVYYTVPLVR Unmodified 1865.9424 0.94243213 1237 O55125 Nipsnap1 Protein NipSnap homolog 1 yes yes 0 0 0 1 7 0 1 66.319 66.319 3 0.0030268 22190 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.777 25.232 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16707 1237 16052 38823 44993 44993 1 RHPDYSVSLLLR Unmodified 1454.7994 0.7993967 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 10 2 1 1 51.541 51.541 4 4.3269E-06 14772 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.522 46.311 39.397 26.659 67.271 28.293 0 0 37 28 65 28 0 0 1 1 2 1 0 0 5571.7 16708 1321 16053 38824;38825 44994;44995 44994 2 RHPSTLPVISDAR Unmodified 1447.7896 0.7895603 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 1 7 0 1 37.824 37.824 4 0.0062314 8806 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.532 25.414 0 77.664 64.101 35.239 73.478 67.193 0 74 65 37 74 65 0 1 1 1 1 1 4356.5 16709 2674 16054 38826 44996 44996 1 RIDSLMDEIAFLK Unmodified 1549.8174 0.81741453 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 8 0 1 85.802 85.802 4 0.028329 30786 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.166 17.608 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 1984.8 16710 1329 16055 38827 44997 44997 1 RIDTDLSK Unmodified 946.50836 0.50835964 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 1 8.67 3.09 1 1 1 43.173 43.173 3 0.0033126 11390 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.57 44.149 872.45 918.93 1149.4 867.66 435.47 1149.5 822 937 1153 864 444 1090 2 3 3 3 2 3 62191 16711 2918 16056 38828;38829;38830 44998;44999;45000 44999 3 RIEAIVK Unmodified 827.52289 0.52288749 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 1 8 0 1 45.128 45.128 3 0.060255 11632 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.107 16.39 149.15 0 0 78.835 108.86 105.63 139 0 0 74 111 102 1 0 0 1 1 1 6650.7 16712 3074 16057 38831 45001 45001 1 RIEDNLPAGEE Unmodified 1241.5888 0.58879481 1227 O55013 Trappc3 Trafficking protein particle complex subunit 3 yes yes 0 0 0 1 2.5 0.5 1 1 46.538 46.538 2 1.8193E-19 15048 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 174.8 160.02 34.843 31.621 68.257 0 24.058 0 33 33 65 0 23 0 2 2 2 0 1 0 16024 16713 1227 16058 38832;38833 45002;45003 45003 2 RIEEEQK Unmodified 930.47706 0.47705951 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 1 4 0 1 31.317 31.317 3 0.01568 7438 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.666 21.099 0 0 106.66 83.04 70.254 97.133 0 0 102 83 74 93 0 0 1 1 1 1 7103 16714 1512 16059 38834 45004 45004 1 RIEELESEVR Unmodified 1258.6517 0.65172941 3262 Q9QWW1;E9Q4F9 Homer2 Homer protein homolog 2 yes no 0 0 0 1 4 0 1 48.019 48.019 3 0.0010308 15284 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.713 42.577 0 38.575 47.458 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 3746.3 16715 3262 16060 38835 45005 45005 1 RIEGSGDQIDTYELSGGAR Unmodified 2022.9607 0.96066097 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 6.25 3.96 1 1 1 1 49.887 49.887 3 7.8605E-63 15975 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 181.63 154.79 128.29 93.094 141.79 99.642 234.59 294.98 120 88 134 97 237 283 2 2 3 4 5 6 141530 16716 118;1534 16061 38836;38837;38838;38839 45006;45007;45008;45009;45010;45011 45011 6 RIEQAGR Unmodified 828.4566 0.45659884 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 1 6 0 1 21.125 21.125 3 0.05142 3040 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.313 15.186 20.319 13.526 0 25.139 0 0 19 14 0 23 0 0 1 1 0 1 0 0 1365.1 16717 2790 16062 38840 45012 45012 1 RIEYIEAR Unmodified 1048.5665 0.56654322 2746 Q91VR8 Brk1 Protein BRICK1 yes yes 0 0 0 1 13 0 1 39.39 39.39 3 4.7599E-07 11150 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.94 81.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16718 2746 16063 38841 45013 45013 1 RIFDAVGFTFPNR Unmodified 1538.7994 0.7993967 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 1 13 0 1 70.398 70.398 3 0.034302 26216 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.042 18.788 89.792 0 57.221 65.507 113.1 0 84 0 56 65 111 0 1 0 1 1 1 0 7877.4 16719 3355 16064 38842 45014 45014 1 RIPLAEWESR Unmodified 1255.6673 0.6673199 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 1 9.33 2.62 1 1 1 53.399 53.399 2;3 2.4273E-09 16234 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 155.33 121.55 207.52 193.77 182.36 125.16 128.32 154.11 195 195 177 121 130 148 3 2 3 3 2 3 99567 16720 2998 16065 38843;38844;38845 45015;45016;45017;45018 45015 4 RIPLSVCFPEYK Unmodified 1507.7857 0.78572048 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 1 10 0 1 66.773 66.773 3 0.0387 18953 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.311 21.59 107.95 138.37 134.38 161.06 192.7 173.59 102 139 139 158 197 168 1 1 1 1 1 1 24941 16721 1255 16066 38846 45019 45019 1 RIPQSTLSEFYPR Unmodified 1592.8311 0.83109076 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 1 9.25 2.28 1 1 1 1 57.771 57.771 3 3.5321E-15 18343 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.91 116.29 384.05 616.48 462.29 187.2 618.15 481.05 361 611 454 176 611 463 3 7 4 2 6 4 125850 16722 1741 16067 38847;38848;38849;38850 45020;45021;45022;45023;45024;45025;45026 45020 7 RIPYFPANQEILQK Unmodified 1715.9359 0.93589019 1144 J3QN31;P28650 Adssl1 Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 1 9 0 1 65.451 65.451 3 0.014523 20473 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.532 2.0976 39.701 0 0 59.252 103.97 0 37 0 0 56 102 0 1 0 0 1 1 0 2582.9 16723 1144 16068 38851 45027 45027 1 RIQLVEEELDR Unmodified 1398.7467 0.74669243 782;926;757;905;1106;1107;1656;209;906;471 E9Q452;E9Q454;E9Q453;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z2H9;D3Z6I8;E9Q7Q3;A2AIM4;CON__Q3SX28;P58774 Tpm1;Tpm3;Tpm3-rs7;Tpm2 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain;Tropomyosin beta chain no no 0 0 0 1 4 0 1 55.653 55.653 3 0.0010238 18983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.85 55.521 0 29.792 0 0 0 39.442 0 28 0 0 0 37 0 1 0 0 0 1 2161.4 + 16724 905;906;1106;1107;1656;209;757;782;926;471 16069 38852 45028 45028 1 RLDEDLAGYCR Unmodified 1366.6299 0.62994811 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 9.5 3.5 1 1 47.472 47.472 3 2.9261E-05 14877 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.368 71.77 284.9 223.31 258.73 149.84 398.56 194.56 268 232 259 148 394 188 2 2 2 1 2 1 57152 16725 1390 16070 38853;38854 45029;45030 45030 2 RLDEDSAK Unmodified 932.45632 0.45632407 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 1 5 0 1 33.729 33.729 3 0.010694 8126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.662 26.685 0 69.16 0 69.541 79.968 106.45 0 65 0 65 83 102 0 1 0 1 1 1 4537 16726 1669 16071 38855 45031 45031 1 RLDEELEDAEK Unmodified 1345.6361 0.63613893 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 1 3 0 1 52.521 52.521 3 5.4549E-10 17822 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.88 76.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16727 2829 16072 38856 45032 45032 1 RLDFDYK Unmodified 955.47633 0.47633123 491;2155 A2ALV3;Q62420;Q8BXU5;F6ZL13;Q62419 Sh3gl2;Sh3gl1 Endophilin-A1;Endophilin-A2 no no 0 0 0 1 8 0.816 1 1 1 52.23 52.23 3 0.011712 15734 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.56 52.685 646.27 524.84 827.26 566.41 776.84 135.56 608 532 820 560 772 130 4 4 5 4 5 1 119500 16728 491;2155 16073 38857;38858;38859 45033;45034;45035;45036;45037 45034 5 RLDIQNK Unmodified 885.50321 0.50321468 1186 O35295 Purb Transcriptional activator protein Pur-beta yes yes 0 0 0 1 8 0 1 40.182 40.182 3 0.0059643 9291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.41 11.813 168.8 146.09 0 188.18 222.9 171.66 158 148 0 176 227 167 1 1 0 1 1 1 12891 16729 1186 16074 38860 45038 45038 1 RLDVEDSSFDQDSR Unmodified 1667.7387 0.73870652 878 E9Q0W6;E9Q4K0;Q8BL65;F6UI99;F6VVW4;D3Z0Y4;F7A5C5 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 1 3 0 1 47.296 47.296 3 0.00020118 15374 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.339 60.557 0 0 87.887 43.07 104.71 0 0 0 83 46 102 0 0 0 1 1 1 0 17314 16730 878 16075 38861 45039 45039 1 RLEAELAAHEPAIQGVLDTGK Unmodified 2217.1753 0.17534519 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 5.33 0.471 2 1 67.63 67.63 4;5 6.3284E-09 24370 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.758 57.993 59.741 132.71 94.611 135.28 62.009 136.81 56 130 93 130 65 130 1 3 2 3 1 3 11371 16731 551 16076 38862;38863;38864 45040;45041;45042 45040 3 RLEAFLTQK Unmodified 1104.6291 0.62914348 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 1 10.8 1.48 1 1 1 1 57.489 57.489 3 0.00065532 15015 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.87 21.632 510.19 333.83 657.93 505.01 459.08 516.97 480 345 651 499 466 493 3 2 3 3 2 2 76927 16732 1500 16077 38865;38866;38867;38868 45043;45044;45045;45046 45044 4 RLEEEQAR Unmodified 1029.5203 0.52032131 706 D3YWN7;E9QMU3;O88735 Map7 Ensconsin yes no 0 0 0 1 3 0 1 24.624 24.624 3 0.0038594 4935 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.1 52.316 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 1 0 1 0 3116.4 16733 706 16078 38869 45047 45047 1 RLEEESAQLK Unmodified 1201.6303 0.63026569 532 A2AWA9 Rabgap1 Rab GTPase-activating protein 1 yes yes 0 0 0 1 5 0 1 43.325 43.325 3 0.033858 12736 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.08 9.7834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16734 532 16079 38870 45048 45048 1 RLEEPEESK Unmodified 1115.5459 0.54586736 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 1 4 0 1 36.807 36.807 3 0.025866 10037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.592 12.994 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16735 1972 16080 38871 45049 45049 1 RLEFLYDK Unmodified 1082.576 0.57604528 2001 Q3UPL0;S4R2A9;S4R1T5;S4R256 Sec31a Protein transport protein Sec31A yes no 0 0 0 1 8 0 1 59.833 59.833 3 0.028042 18485 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.593 32.246 59.471 34.107 74.81 65.364 64.987 0 56 37 74 65 65 0 1 1 1 1 1 0 5069.1 16736 2001 16081 38872 45050 45050 1 RLEQEVNQER Unmodified 1299.6531 0.6531264 2230 Q6PAJ1 Bcr Breakpoint cluster region protein yes yes 0 0 0 1 3 0 1 32.83 32.83 3 0.050681 8704 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.189 26.726 39.564 27.124 0 0 38.702 0 37 28 0 0 37 0 1 1 0 0 1 0 3975.2 16737 2230 16082 38873 45051 45051 1 RLESFYIK Unmodified 1054.5811 0.58113065 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 1 10 0 1 55.916 55.916 3 0.015455 14170 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.267 25.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16738 1420 16083 38874 45052 45052 1 RLETLLEER Unmodified 1157.6404 0.64043645 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 1 5.5 0.5 1 1 53.386 53.386 3 0.00050801 16843 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.95 64.182 0 68.858 18.086 28.664 104.4 28.541 0 65 19 28 102 28 0 2 1 1 2 1 7879.4 16739 468 16084 38875;38876 45053;45054 45054 2 RLETYYNATEPVISFYDK Unmodified 2208.0739 0.07389981 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 1 7.5 0.5 1 1 71.868 71.868 3;4 8.4901E-07 24048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.525 56.476 88.939 23.795 0 0 87.864 0 83 28 0 0 84 0 1 1 0 0 1 0 2782.7 16740 3306 16085 38877;38878 45055;45056 45056 2 RLGYISVVDTLK Unmodified 1362.7871 0.78710068 3449;3451;3452;3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank3;Ank2 Ankyrin-3;Ankyrin-2 no no 0 0 0 1 10 0 1 66.258 66.258 3 0.00058733 18789 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.622 22.707 0 47.194 104.7 63.472 70.824 106.71 0 46 102 65 74 102 0 1 1 1 1 1 7628.5 16741 3450;3449;3451;3452 16086 38879 45057 45057 1 RLNDFASAVR Deamidation (N) 1148.5938 0.5938206 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 1 0 1 9.5 3.5 1 1 47.727 47.727 3 0.0010868 16263 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.358 48.305 49.128 45.631 0 59.981 65.235 0 46 46 0 56 65 0 1 1 0 1 1 0 9808.8 16742 1360 16087 38880;38881 45058;45059 45059 430 2 RLNDFASAVR Unmodified 1147.6098 0.60980502 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 1 7.5 0.5 1 1 46.581 46.581 3 7.3376E-06 12251 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.84 67.839 274.98 232.96 294.53 210.98 285.42 270.08 259 241 286 214 291 261 2 2 1 2 2 2 61746 16743 1360 16087 38882;38883 45060;45061 45061 2 RLNHYVLYK Unmodified 1204.6717 0.671677 1378 P14685 Psmd3 26S proteasome non-ATPase regulatory subunit 3 yes yes 0 0 0 1 11 0 1 44.282 44.282 3 0.0078717 9383 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.993 40.664 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16744 1378 16088 38884 45062 45062 1 RLPASDGLDLSQAAAR Unmodified 1639.8642 0.86418181 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 7.8 2.64 2 2 1 52.747 52.747 3 7.6247E-68 15531 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 204.94 180.87 325.69 463.34 645.71 534.69 519.3 596 307 465 646 528 529 573 2 4 5 4 4 5 134280 16745 1557 16089 38885;38886;38887;38888;38889 45063;45064;45065;45066;45067 45065 5 RLPEAIEEVK Unmodified 1182.6608 0.66083754 2781 Q91Z53;D6REG4;B1AXQ0 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 1 5.5 0.5 1 1 54.462 54.462 3 7.2382E-05 18143 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.35 57.837 137.49 98.05 72.18 175.98 119.65 65.876 129 102 74 167 120 65 2 2 1 2 1 1 11473 16746 2781 16090 38890;38891 45068;45069 45068 2 RLPEDLYNDR Deamidation (N) 1290.6204 0.62042929 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 1 0 1 4 0 1 48.699 48.699 3 0.0018329 15809 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.69 65.932 29.792 17.75 27.374 38.317 26.199 38.694 28 19 28 37 28 37 1 1 1 1 1 1 7938.9 16747 2919 16091 38892 45070 45070 1024 1 RLPEDLYNDR Unmodified 1289.6364 0.6364137 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 8 3.56 1 1 1 46.817 46.817 3 5.5232E-16 14582 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 177.47 139.5 404.11 486.12 513.62 567.55 507.66 249.34 380 482 511 556 509 241 4 5 4 6 4 3 96058 16748 2919 16091 38893;38894;38895 45071;45072;45073;45074;45075;45076 45071 6 RLPPPAISLR Unmodified 1118.6924 0.69241244 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 1 10 0 1 48.815 48.815 3 0.0017003 11237 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.008 48.888 0 37.905 87.532 0 67.99 0 0 37 83 0 65 0 0 1 1 0 1 0 3003 16749 732 16092 38896 45077 45077 1 RLPSSPASPSPK Unmodified 1222.667 0.66698555 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 9 0 1 39.6 39.6 3 0.0011287 8632 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.118 41.459 0 69.16 0 45.906 0 0 0 65 0 42 0 0 0 1 0 1 0 0 12988 16750 526 16093 38897 45078 45078 1 RLPWATGYAEVINAGK Unmodified 1744.9261 0.92605378 2015 Q3UYC0 Ppm1h Protein phosphatase 1H yes yes 0 0 0 1 10 0.816 1 1 1 68.556 68.556 3 2.8335E-05 19871 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.428 49.375 138.22 72.883 151.72 75.078 80.409 125.63 130 74 148 74 83 120 2 1 2 1 1 2 20820 16751 2015 16094 38898;38899;38900 45079;45080;45081 45080 3 RLQDFLR Unmodified 946.53485 0.53484916 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 10.7 1.7 1 1 1 53.084 53.084 3 0.0096889 14658 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.46 27.164 49.225 26.473 123.4 144.57 56.581 166.81 46 28 120 139 56 158 1 1 2 2 1 3 31423 16752 2186 16095 38901;38902;38903 45082;45083;45084 45082 3 RLQQTQAQVDEVVDIMR Unmodified 2028.0422 0.042222526 564 B0QZN5;P63044 Vamp2 Vesicle-associated membrane protein 2 yes no 0 0 0 1 5 0 1 65.294 65.294 3 2.1756E-06 23149 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.175 56.752 78.917 42.868 45.157 36.92 44.084 68.032 74 46 46 37 46 65 1 1 1 1 1 1 6605.1 16753 564 16096 38904 45085 45085 1 RLQSIGTENTEENR Unmodified 1645.802 0.80197548 1309 P05064;A6ZI44;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 8.5 4.5 1 1 34.98 34.98 3 4.9894E-07 8782 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.9 76.084 49.179 0 57.251 69.424 48.116 0 46 0 56 65 46 0 1 0 2 1 1 0 9703.3 16754 1309 16097 38905;38906 45086;45087 45087 2 RLSLESEGANEGATAAPELSALEEAFR Unmodified 2817.3781 0.37808033 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 1 5.5 0.5 1 1 79.864 79.864 3 1.2166E-17 30097 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.005 59.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16755 2291 16098 38907;38908 45088;45089 45088 2 RLTDADAMK Unmodified 1019.507 0.50697943 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 9.5 3.5 1 1 42.097 42.097 3 0.0051948 12028 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.2 27.883 38.833 74.736 82.619 56.284 0 49.036 37 74 83 56 0 46 1 1 1 1 0 1 17227 16756 1881 16099 38909;38910 45090;45091 45091 2 RLTFLVAQK Unmodified 1074.655 0.6549643 2066 Q5SWU9;V9GXY1 Acaca Acetyl-CoA carboxylase 1;Biotin carboxylase yes no 0 0 0 1 1 0 1 58.112 58.112 3 0.010417 18708 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.654 39.759 59.786 15.557 37.535 28.367 0 49.036 56 19 37 28 0 46 1 1 1 1 0 1 1714.7 16757 2066 16100 38911 45092 45092 1 RLTLAGAR Unmodified 856.52428 0.52428448 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 1 10 0 1 35.671 35.671 3 0.0060025 6220 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.051 37.44 59.513 114.09 0 90.119 31.884 77.974 56 111 0 83 37 74 1 1 0 1 1 1 15750 16758 144 16101 38912 45093 45093 1 RLTVQTK Unmodified 844.51305 0.51305109 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 9 0 1 35.947 35.947 3 0.053703 7175 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.485 28.541 0 0 265.93 199.84 154.91 338.83 0 0 254 200 168 322 0 0 1 1 1 1 17455 16759 2148 16102 38913 45094 45094 1 RLVSDGNINSDR Unmodified 1344.6746 0.67459012 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 13 0 1 34.351 34.351 3 0.00049304 8743 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.22 44.722 0 58.467 66.822 0 67.99 0 0 56 65 0 65 0 0 1 1 0 1 0 6881.6 16760 2148 16103 38914 45095 45095 1 RMPGIGWLK Unmodified 1056.5903 0.59025555 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 1 12 0 1 62.838 62.838 3 0.064519 15242 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.113 21.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16761 2403 16104 38915 45096 45096 1 RNEFLGELQK Unmodified 1232.6513 0.65133548 112;3317 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;Q9R1T4 Sept11;Sept6 Septin-11;Septin-6 no no 0 0 0 1 7.83 2.41 2 2 1 1 53.966 53.966 3;4 2.4613E-05 17316 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.71 73.17 540.23 557.03 644.26 753.55 383.85 642.27 509 566 645 723 390 612 4 4 5 4 4 4 101870 16762 112;3317 16105 38916;38917;38918;38919;38920;38921 45097;45098;45099;45100;45101;45102 45097 6 RNEVLDR Unmodified 900.47773 0.47772821 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7 4.32 1 1 1 27.367 27.367 3 0.006011 6271 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.21 50.828 206.28 134.91 202.68 224.33 36.688 147.13 194 139 205 213 37 139 3 2 3 2 1 2 31410 16763 551 16106 38922;38923;38924 45103;45104;45105 45103 3 RNEVWLVK Unmodified 1042.5924 0.59236404 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 1 10.5 2.5 1 1 52.037 52.037 3 0.010991 16983 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.318 37.695 256.67 226.28 228.95 143.55 275.91 241.27 241 231 223 139 278 232 2 2 2 2 3 2 37887 16764 241 16107 38925;38926 45106;45107;45108 45108 3 RNGAVTHIK Deamidation (N) 995.55123 0.55122751 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 1 0 1 6 0 1 33.727 33.727 4 0.056515 7672 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.997 25.095 69.618 25.098 0 0 0 29.848 65 28 0 0 0 28 1 1 0 0 0 1 1889.1 16765 1512 16108 38927 45109 45109 564 1 RNPGGWVEK Unmodified 1041.5356 0.53557744 106 A0A0G2JGX4;Q6PIC6 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 1 9.25 2.28 1 1 1 1 41.3 41.3 3 0.0031118 11685 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.335 40.949 752.9 479.09 665.55 465.37 325.72 643.1 707 491 658 455 335 612 4 4 4 4 3 4 210670 16766 106 16109 38928;38929;38930;38931 45110;45111;45112;45113;45114 45114 5 RNPGVQEGYK Unmodified 1146.5782 0.57817054 3146 Q9DCL9 Paics Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase yes yes 0 0 0 1 9.5 3.5 1 1 33.784 33.784 3 0.0010479 7694 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.568 61.909 0 0 0 60.189 54.18 47.49 0 0 0 56 56 46 0 0 0 1 1 1 3721.3 16767 3146 16110 38932;38933 45115;45116 45115 2 RNSVFQQGMK Deamidation (N) 1194.5815 0.58154136 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 1 7 0 1 45.765 45.765 3 0.055916 12513 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.662 35.327 58.885 25.821 0 0 56.948 47.411 55 28 0 0 56 46 1 1 0 0 1 1 1811.7 16768 106;2253;2699 16111 38934 45117 45117 43 1 RNTTIPTK Unmodified 929.52943 0.52942943 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 1 7 0 1 34.431 34.431 3 0.013615 7271 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.269 51.439 0 86.625 100.91 95.635 0 88.478 0 83 102 93 0 83 0 1 1 1 0 1 6062.7 16769 1397;1762 16112 38935 45118 45118 1 RPAAATATAR Unmodified 984.54648 0.54647648 860;1464 P27546;A0A140T8T5;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 1 7.5 0.5 1 1 21.121 21.121 3 0.0034426 3168 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.896 50.433 5.2899 22.617 25.956 17.783 18.27 22.931 5 22 26 18 19 22 1 2 2 2 2 2 2181.4 16770 1464;860 16113 38936;38937 45119;45120 45120 2 RPAEAEAHR Unmodified 1035.521 0.52099001 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 1 3.5 0.5 1 1 17.47 17.47 3 0.00085235 2507 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.34 65.982 21.368 7.5717 9.0126 17.62 22.538 20.677 20 8 9 17 23 20 2 1 1 2 2 2 2890.8 16771 2059 16114 38938;38939 45121;45122 45121 2 RPAEDMEEEQAFK Unmodified 1578.6984 0.69842161 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23;H3BJ43;A0A286YE41 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1 3 0 1 47.736 47.736 3 0.00020853 15592 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.905 55.187 59.428 54.494 64.754 45.039 73.357 57.603 56 56 65 46 74 56 1 1 1 1 1 1 6428.9 16772 613 16115 38940 45123 45123 1 RPAEDYVPR Unmodified 1101.5567 0.55670682 450 A2AEC2;Q8R0A5;Q9DB24 Tceal3;Tceal6 Transcription elongation factor A protein-like 3 no no 0 0 0 1 4.33 1.25 1 1 1 35.976 35.976 3 0.0057253 9701 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.841 52.94 0 234.35 110.87 195.65 258.58 309.22 0 222 111 185 263 297 0 3 2 2 2 3 43768 16773 450 16116 38941;38942;38943 45124;45125;45126 45125 3 RPAIFTYHDVGLNYK Unmodified 1792.9261 0.92605378 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BQM5;A0A2I3BPW0;A0A2I3BPL1;A0A2I3BS20 Ndrg2 Protein NDRG2 no no 0 0 0 1 10.2 1.56 1 2 2 1 1 1 57.383 57.383 3;4 5.9807E-23 14837 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.07 115.48 926.3 560.97 972.41 847.81 971.4 739.92 870 576 955 811 960 709 6 3 6 6 5 5 200620 16774 3277;377 16117 38944;38945;38946;38947;38948;38949;38950;38951 45127;45128;45129;45130;45131;45132;45133;45134 45130 8 RPALEPVR Unmodified 936.5505 0.55049923 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 1 6 0 1 33.431 33.431 3 0.012039 7518 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.1 39.543 78.647 72.336 65.593 0 73.082 125.83 74 74 65 0 74 120 1 1 1 0 1 1 5569.4 16775 2046 16118 38952 45135 45135 1 RPANQFVPR Unmodified 1083.5938 0.59376103 1789 P67871;G3UXG7;G3UXU2 Csnk2b Casein kinase II subunit beta yes no 0 0 0 1 10.5 2.5 1 1 33.981 33.981 3 9.6864E-05 6637 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.06 99.775 138.18 106.63 320.6 100.53 393.89 366.12 130 111 307 102 393 354 1 1 2 1 2 2 27258 16776 1789 16119 38953;38954 45136;45137 45136 2 RPCFSALTPDETYVPK Unmodified 1879.9138 0.91383411 656 CON__P02769 yes yes 0 0 0 1 6 0 1 60.75 60.75 3 2.6217E-05 20451 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.128 61.004 20.292 18.848 0 20.43 17.928 29.336 19 19 0 19 19 28 1 1 0 1 1 1 3721.1 + 16777 656 16120 38955 45138 45138 1 RPCFSALTVDETYVPK Unmodified 1881.9295 0.92948418 1321 P07724 Alb Serum albumin yes yes 0 0 0 1 8.5 2.69 1 1 1 1 63.363 63.363 3 9.3945E-19 21809 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.15 73.5 236.21 270.83 285.45 171.64 255.72 212.91 223 269 287 177 259 204 3 2 3 3 3 2 59020 16778 1321 16121 38956;38957;38958;38959 45139;45140;45141;45142 45139 4 RPDDEQR Unmodified 914.42061 0.42060727 35 A0A087WSS1;G3X9J4;E9QM90;Q148V7;A0A087WPW3 2310035C23Rik;Kiaa1468 LisH domain and HEAT repeat-containing protein KIAA1468 yes no 0 0 0 1 1.5 0.5 1 1 16.983 16.983 3 1.4518E-06 2712 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 169.06 116.38 38.271 25.961 38.071 29.051 45.178 46.681 36 27 38 29 46 45 3 2 3 2 3 3 12596 16779 35 16122 38960;38961 45143;45144;45145 45143 3 RPDLLTMVVDYR Unmodified 1476.7759 0.77588407 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 1 10 2.16 1 1 1 70.846 70.846 3 5.6548E-12 26249 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.45 87.558 297.13 131.64 84.595 105.87 203.02 129.67 278 139 84 102 203 125 4 3 2 2 3 2 73017 16780 2143 16123 38962;38963;38964 45146;45147;45148;45149 45149 4 RPDSSDDR Unmodified 946.41044 0.41043651 1002 F6V459;O88532 Zfr Zinc finger RNA-binding protein yes no 0 0 0 1 2.5 0.5 1 1 16.68 16.68 3 0.004164 2440 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.392 52.512 10.611 10.808 10.801 8.9539 12.723 13.495 10 11 11 9 13 13 1 1 1 1 1 1 2249.7 16781 1002 16124 38965;38966 45150;45151 45151 2 RPDVVESQPDAASQLNVGASGNLAK Unmodified 2522.2725 0.27249305 2858 Q99LB6 Mat2b Methionine adenosyltransferase 2 subunit beta yes yes 0 0 0 1 5 0 1 56.368 56.368 4 0.0017219 18993 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.746 15.418 29.749 0 49.622 0 37.384 38.375 28 0 46 0 37 37 1 0 1 0 1 1 3012 16782 2858 16125 38967 45152 45152 1 RPEEETGR Unmodified 972.46247 0.46247208 167 E9Q9N6;E9PYX3;A0A0R4J227;A0A0R4J0B1;Q3T9A3;F6ZS70;E9QMP6;Q05512;F7A3Q3;F6ZEX4 Mark2 Serine/threonine-protein kinase MARK2 yes no 0 0 0 1 1 0 1 19.015 19.015 3 0.0024831 2869 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.86 59.14 20.224 14.341 15.268 0 20.134 22.877 19 15 15 0 20 22 1 1 1 0 1 1 3066.2 16783 167 16126 38968 45153 45153 1 RPEGFDGLGYR Unmodified 1265.6153 0.61528433 2940 Q9CQS4 Slc25a46 Solute carrier family 25 member 46 yes yes 0 0 0 1 5.5 0.5 1 1 47.096 47.096 3 0.0011274 13944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.525 53.904 78.872 72.963 27.196 78.233 54.683 126.36 74 74 28 74 56 120 2 2 1 2 1 2 5687.8 16784 2940 16127 38969;38970 45154;45155 45155 2 RPELGITLTK Unmodified 1126.671 0.67100829 1150 K3W4S6;V9GX26;Q9R062 Gyg;Gyg1 Glycogenin-1 yes no 0 0 0 1 9 0 1 54.725 54.725 3 0.025697 15381 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.071 18.186 0 0 97.356 73.394 89.601 125.36 0 0 93 74 93 120 0 0 1 1 1 1 4474.8 16785 1150 16128 38971 45156 45156 1 RPEPAQPPISDAR Unmodified 1432.7423 0.74227576 2716 Q8VHI6 Wasf3 Wiskott-Aldrich syndrome protein family member 3 yes yes 0 0 0 1 3.5 0.5 1 1 35.237 35.237 3 0.0012434 9864 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.118 44.557 20.095 19.566 87.942 37.516 0 39.442 19 19 84 37 0 37 1 1 2 1 0 1 8936.2 16786 2716 16129 38972;38973 45157;45158 45157 2 RPFFPFHSPSR Unmodified 1373.6993 0.69928873 1441 P23927;A0A1L1SRG5 Cryab Alpha-crystallin B chain yes no 0 0 0 1 12 0 1 47.646 47.646 4 0.032279 9524 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.861 25.71 39.342 0 60.394 0 56.251 67.685 37 0 56 0 56 65 1 0 1 0 1 1 22139 16787 1441 16130 38974 45159 45159 1 RPFGISALIVGFDFDGTPR Unmodified 2064.0793 0.079259959 3399 Q9Z2U0;A0A338P7D7 Psma7 Proteasome subunit alpha type-7 yes no 0 0 0 1 11 0 1 86.592 86.592 3 0.051781 27478 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.353 22.157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16788 3399 16131 38975 45160 45160 1 RPFTQNLGLEELGIELDPK Unmodified 2168.1477 0.14773345 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 1 8.67 2.05 2 2 1 1 79.549 79.549 3;4 5.3738E-08 27790 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.03 67.347 315.56 216.41 331.2 208.66 267.92 416.62 296 213 324 205 268 398 5 3 5 4 4 6 75225 16789 1164 16132 38976;38977;38978;38979;38980;38981 45161;45162;45163;45164;45165;45166;45167;45168 45165 8 RPGGPQYGVAR Unmodified 1156.6101 0.61013937 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 7.5 0.5 1 1 29.711 29.711 3 4.0386E-09 5340 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 132.88 99.497 33.818 84.489 92.305 69.169 97.833 43.616 32 83 93 70 98 42 1 2 2 2 2 1 9835.8 16790 3261 16133 38982;38983 45169;45170 45169 2 RPGGPSNVLR Unmodified 1051.5887 0.58867565 915 E9Q648;Q8CCB4;E9PXG9 Vps53 Vacuolar protein sorting-associated protein 53 homolog yes no 0 0 0 1 7 0 1 31.934 31.934 3 0.058499 6136 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.661 15.269 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 1653.6 16791 915 16134 38984 45171 45171 1 RPGIGLSPSHR Unmodified 1175.6523 0.65233854 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 1 9 0 1 29.815 29.815 3 0.050787 4837 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.564 23.662 25.752 0 0 20.348 22.303 23.882 24 0 0 19 23 23 1 0 0 1 1 1 1837.9 16792 2306 16135 38985 45172 45172 1 RPGTGGGYR Unmodified 919.46241 0.4624125 2495 Q8C3Q5;F6T9T6 Shisa7 Protein shisa-7 yes no 0 0 0 1 7 0 1 22.035 22.035 3 0.007313 3188 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.1 52.065 17.126 8.4212 0 0 7.322 0 16 9 0 0 7 0 1 1 0 0 1 0 990.73 16793 2495 16136 38986 45173 45173 1 RPGTTTPAR Unmodified 955.51993 0.51992738 2603 Q8K341;F7CID0 Atat1 Alpha-tubulin N-acetyltransferase 1 yes no 0 0 0 1 7 0 1 20.387 20.387 3 0.0095411 3002 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.19 27.887 7.4366 6.8344 6.706 9.4373 0 12.792 7 7 7 9 0 12 1 1 1 1 0 1 823.02 16794 2603 16137 38987 45174 45174 1 RPGYGAYDAFK Unmodified 1243.5986 0.59857163 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 1 7.5 0.5 1 1 49.144 49.144 3 0.015129 13395 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.837 27.178 79.032 132.99 0 0 160.34 143.6 74 130 0 0 158 139 1 2 0 0 2 2 8856.9 16795 2269 16138 38988;38989 45175;45176 45176 2 RPISADSAIMNPASK Unmodified 1556.7981 0.79807608 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 8.4 2.42 1 1 2 1 49.855 49.855 3;4 7.3302E-05 14506 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.966 67.135 324.76 376.16 490.35 499.04 504.64 575.35 306 380 478 492 509 550 3 4 3 5 4 4 58000 16796 2185 16139 38990;38991;38992;38993;38994 45177;45178;45179;45180;45181;45182 45178 6 RPLEDGDQPDAK Unmodified 1339.6368 0.63680763 99 A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8 Fubp1 Far upstream element-binding protein 1 yes no 0 0 0 1 3 0 1 37.958 37.958 3 0.0018883 11080 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.298 38.007 39.406 0 49.573 0 67.99 0 37 0 46 0 65 0 1 0 1 0 1 0 2544 16797 99 16140 38995 45183 45183 1 RPLGNFTPPPTYAETLSTAPVASR Unmodified 2542.318 0.31798668 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 1 8 0 1 64.414 64.414 3 0.06258 20723 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 30.812 22.625 0 0 0 0 28.291 29.041 0 0 0 0 28 28 0 0 0 0 1 1 5118.8 16798 894 16141 38996 45184 45184 1 RPLIDQVVQTALSETQDPEEVSVTVK Unmodified 2880.508 0.50803187 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 8.83 3.02 2 1 1 2 87.112 87.112 4;5 6.1679E-24 33851 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.03 85.648 118.5 204.7 271.51 189.61 241.15 224.19 111 196 268 186 241 214 2 5 5 4 7 6 44398 16799 2185 16142 38997;38998;38999;39000;39001;39002 45185;45186;45187;45188;45189;45190;45191;45192;45193;45194;45195 45195 11 RPLILQLVHVSPEDK Unmodified 1743.0043 0.004304102 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 1 10.3 0.471 2 1 65.069 65.069 3;4 0.00042429 17656 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.709 50.572 206.92 181.99 53.857 44.604 131.02 84.739 194 185 56 46 130 83 2 2 1 1 1 1 32510 16800 815;2590 16143 39003;39004;39005 45196;45197;45198 45198 3 RPLTAATLFK Unmodified 1116.6655 0.66552898 2069 Q5SYD0 Myo1d Unconventional myosin-Id yes yes 0 0 0 1 12 0 1 56.813 56.813 3 0.0026044 12945 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.332 45.103 138.04 106.24 153.07 0 158.98 183.08 130 111 148 0 158 176 1 1 1 0 1 1 11781 16801 2069 16144 39006 45199 45199 1 RPLVLQLVNSTTEYAEFLHCK Deamidation (N) 2518.289 0.28899474 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 0 1 8.5 0.5 1 1 78.219 78.219 4 7.6732E-11 27219 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.414 80.953 68.949 121.83 71.935 76.595 46.148 145.79 65 120 74 74 46 138 1 2 1 1 1 2 25330 16802 118;1534 16145 39007;39008 45200;45201 45200 55 2 RPLVLQLVNSTTEYAEFLHCK Unmodified 2517.305 0.30497915 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 1 11 1.41 1 2 2 2 81.91 81.91 4;5 2.1822E-17 25452 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.15 99.339 3768.7 2474.8 4006.9 3763.7 2181 3476.1 3543 2613 3980 3681 2361 3315 6 7 10 6 9 11 199970 16803 118;1534 16145 39009;39010;39011;39012;39013;39014;39015 45202;45203;45204;45205;45206;45207;45208;45209;45210;45211;45212;45213;45214;45215 45209 14 RPLVLQLVTSK Unmodified 1252.7867 0.78670675 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 1 6.5 5.5 1 1 66.14 66.14 3 0.00098752 22516 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.314 67.423 177.51 90.297 205.66 172.14 29.288 167.36 167 93 203 166 28 157 3 1 3 2 1 2 48575 16804 960 16146 39016;39017 45216;45217;45218 45217 3 RPNPAPGTR Unmodified 964.52026 0.52026173 1267 O88520 Shoc2 Leucine-rich repeat protein SHOC-2 yes yes 0 0 0 1 7 0 1 21.135 21.135 3 0.002249 3086 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.882 66.011 0 0 7.3087 5.9551 8.8929 7.2082 0 0 7 6 9 7 0 0 1 1 1 1 527.64 16805 1267 16147 39018 45219 45219 1 RPNSGSLIQVVTTDGK Unmodified 1670.8951 0.89514758 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;A0A0G2JGY0 Qdpr Dihydropteridine reductase yes no 0 0 0 1 8 0.816 1 1 1 55.968 55.968 3 4.3802E-11 16687 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 116.87 93.867 168.67 261.23 177.84 181.98 194.43 211.92 158 259 176 176 195 204 2 4 2 2 2 3 43965 16806 2464 16148 39019;39020;39021 45220;45221;45222;45223 45221 4 RPNSGSLIQVVTTDGK Deamidation (N) 1671.8792 0.87916317 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;A0A0G2JGY0 Qdpr Dihydropteridine reductase yes no 0 1 0 1 10 3 1 1 61.891 61.891 3 0.0087281 21610 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.249 17.484 69.126 43.156 67.392 0 75.098 67.147 65 46 65 0 74 65 1 1 1 0 1 1 6061.7 16807 2464 16148 39022;39023 45224;45225 45225 930 2 RPNTTDGR Unmodified 915.45224 0.45224175 2620 Q8N7N5 Dcaf8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 1 4 0 1 16.873 16.873 3 0.0034259 2388 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.57 64.451 6.3947 0 7.2729 6.0354 4.7377 6.2608 6 0 7 6 5 6 1 0 1 1 1 1 575.33 16808 2620 16149 39024 45226 45226 1 RPPEEQR Unmodified 910.46208 0.46207815 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 1 5.5 4.39 1 1 1 1 19.262 19.262 3 0.0090508 2744 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.12 49.642 136.98 146.99 181.73 161.6 201.46 213.85 129 149 180 163 205 206 2 3 3 4 4 5 33177 16809 1749 16150 39025;39026;39027;39028 45227;45228;45229;45230;45231;45232 45228 6 RPPGLFR Unmodified 841.49226 0.49225607 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 10 0 1 39.805 39.805 3 0.0094403 7633 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.11 74.299 0 0 106.2 93.462 98.761 105.91 0 0 102 93 102 102 0 0 1 1 1 1 20226 16810 1999 16151 39029 45233 45233 1 RPPGVLHCTTK Unmodified 1264.671 0.67102507 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 10 1.41 1 1 1 1 1 34.275 34.275 3;4 0.001214 6906 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.32 37.382 361.3 382.51 304.35 490.96 477.34 474.61 339 378 313 474 485 458 3 3 2 5 3 3 43174 16811 1390 16152 39030;39031;39032;39033;39034 45234;45235;45236;45237;45238;45239 45234 6 RPPPAQAPAPQPAPQPAPTPSVGSSFFSSLSQAVK Unmodified 3496.8103 0.81030233 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 9.15 2.74 1 2 4 3 1 1 1 73.867 73.867 4;5 1.1802E-21 25214 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.159 57.136 580.3 778.8 510.4 727.64 663.49 798.37 544 770 518 692 672 761 12 15 11 12 12 14 484600 16812 2173 16153 39035;39036;39037;39038;39039;39040;39041;39042;39043;39044;39045;39046;39047 45240;45241;45242;45243;45244;45245;45246;45247;45248;45249;45250;45251;45252;45253;45254;45255;45256;45257;45258;45259 45245 20 RPQIYYETSIHAIK Unmodified 1717.9152 0.91515474 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 1 9 0 1 51.231 51.231 4 0.0014084 13716 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.899 31.341 98.673 60.224 136.55 0 112.81 95.919 93 65 130 0 111 93 1 1 1 0 1 1 6123.1 16813 2302 16154 39048 45260 45260 1 RPSANCDPYAVTEAIVR Unmodified 1917.9367 0.93669482 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 1 6.67 2.98 1 2 1 1 1 54.714 54.714 3;4 1.4826E-33 18217 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.36 127.52 394.03 268.51 489.95 302.57 377.08 434.9 370 269 482 297 380 416 6 4 8 5 5 6 336580 16814 1383 16155 39049;39050;39051;39052;39053;39054 45261;45262;45263;45264;45265;45266;45267;45268 45262 8 RPSANCDPYAVTEAIVR Deamidation (N) 1918.9207 0.92071041 1383 P15105 Glul Glutamine synthetase yes yes 0 1 0 1 5 0 1 56.858 56.858 3 0.013829 19254 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.437 36.706 0 38.922 26.668 29.015 0 49.036 0 37 28 28 0 46 0 1 1 1 0 1 3228.6 16815 1383 16155 39055 45269 45269 452 1 RPSATLIAR Unmodified 983.58761 0.58761301 3112 Q9DB41 Slc25a18 Mitochondrial glutamate carrier 2 yes yes 0 0 0 1 8 0 1 34.815 34.815 3 0.0092709 6953 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.664 35.928 117.58 127.93 147.46 99.052 193.83 162.9 111 130 148 102 195 158 1 1 1 1 1 1 6865.9 16816 3112 16156 39056 45270 45270 1 RPSNVSQASR Unmodified 1100.5687 0.56866849 111 A0A0J9YTW6;B1AWN6 Scn2a1 Sodium channel protein yes no 0 0 0 1 7.8 2.79 1 1 1 1 1 20.585 20.585 3 2.4273E-09 3005 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 155.33 103.99 27.557 19.354 40.942 41.307 15.586 29.403 26 19 40 41 16 28 3 1 3 3 1 2 8145.1 16817 111 16157 39057;39058;39059;39060;39061 45271;45272;45273;45274;45275 45273 5 RPSPGEVSK Unmodified 955.50869 0.50869399 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6 Ppp1r9a yes no 0 0 0 1 6 0 1 32.055 32.055 3 0.022911 6948 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.019 37.233 54.277 40.345 40.847 42.703 40.839 32.947 51 42 42 42 42 32 1 1 1 1 1 1 2915.6 16818 1119 16158 39062 45276 45276 1 RPSSSASTK Unmodified 919.47231 0.47230849 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 1 7 0 1 23.146 23.146 3 0.025837 3362 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.806 17.646 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 953.37 16819 353 16159 39063 45277 45277 1 RPVGASFSFGGK Unmodified 1208.6302 0.63020611 2001 Q3UPL0;S4R2A9 Sec31a Protein transport protein Sec31A yes no 0 0 0 1 11 0 1 50.896 50.896 3 0.0017317 12018 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.292 37.353 0 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 0 9914.6 16820 2001 16160 39064 45278 45278 1 RPVMLTLLR Unmodified 1097.6743 0.67431953 459 Q7TMY8;A2AFQ0 Huwe1 E3 ubiquitin-protein ligase HUWE1 yes no 0 0 0 1 1 0 1 59.027 59.027 3 0.010766 19041 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.04 39.265 0 20.216 0 20.767 0 29.848 0 19 0 19 0 28 0 1 0 1 0 1 2337.8 16821 459 16161 39065 45279 45279 1 RPWFAGDK Unmodified 975.49265 0.49265 1347;696 P10649;A2AE89;F6WHQ7;D3YVP5;Q80W21;D3YVP6;E9QAC8 Gstm1;Gstm7 Glutathione S-transferase Mu 1;Glutathione S-transferase Mu 7 no no 0 0 0 1 10 0 1 49.033 49.033 3 0.013616 11401 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.267 12.588 846.86 819.4 523.3 931.43 1004.7 992.56 796 832 529 898 1034 958 2 2 1 2 2 2 124990 16822 1347;696 16162 39066 45280;45281 45281 2 RPWYIQGAASPK Unmodified 1372.7252 0.72516913 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 1 11 0 1 50.415 50.415 3 0.0057022 11856 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.419 34.821 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16823 882 16163 39067 45282 45282 1 RPYEVDGR Unmodified 990.48829 0.4882929 716 S4R1M2;D3YXK2 Safb Scaffold attachment factor B1 yes no 0 0 0 1 4 0 1 29.513 29.513 3 0.0088214 6686 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.219 35.87 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 3754.7 16824 716 16164 39068 45283 45283 1 RQDEDYDEQVEESLQDEDDNDVYILTK Unmodified 3302.4222 0.42224915 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 1 3 0 1 74.042 74.042 4 0.026509 27799 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 28.404 22.802 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1307.4 16825 2422 16165 39069 45284 45284 1 RQDLEDSLQAQQYFADANEAESWMR Unmodified 3000.3308 0.33081257 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.33 4.03 1 1 1 77.771 77.771 3;4 1.6102E-16 29060 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.543 60.467 0 9.576 0 19.879 47.203 29.848 0 9 0 19 46 28 0 1 0 1 1 1 21821 16826 551 16166 39070;39071;39072 45285;45286;45287 45285 3 RQDLFIVSK Unmodified 1104.6291 0.62914348 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 1 8 0 1 55.255 55.255 3 0.011126 16301 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.408 26.427 87.939 131.1 77.174 97.049 0 168.43 83 130 83 93 0 158 1 1 1 1 0 1 15067 16827 1548 16167 39073 45288 45288 1 RQEAEGTR Unmodified 945.46281 0.46280643 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 1 2 0 1 14.934 14.934 3 0.00041769 2478 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 148.69 78.879 6.3482 10.103 9.6345 12.286 13.617 13.469 6 10 10 12 14 13 1 1 2 2 2 2 3463.7 16828 90 16168 39074 45289;45290 45289 2 RQEELDR Unmodified 944.46756 0.46755746 2973 Q9CW03 Smc3 Structural maintenance of chromosomes protein 3 yes yes 0 0 0 1 1 0 1 22.289 22.289 3 0.017211 3589 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.265 9.1373 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 2028.1 16829 2973 16169 39075 45291 45291 1 RQELLNQR Unmodified 1055.5836 0.58359027 876 E9Q0N0;Q9Z0R4;E9Q3I4;E9Q3I5;E9Q3I8;E9Q3I9;Q6NZJ5;CON__ENSEMBL:ENSBTAP00000001528 Itsn1 Intersectin-1 yes no 0 0 0 1 6 0 1 30.55 30.55 3 0.036113 6221 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.981 33.359 20.387 0 0 30.092 27.237 19.477 19 0 0 28 28 19 1 0 0 1 1 1 1680.6 16830 876 16170 39076 45292 45292 1 RQGHTEPQP Unmodified 1048.505 0.5050056 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 6 4.97 1 1 1 20.411 20.411 3 0.00083228 3067 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.802 83.795 50.912 62.548 75.852 61.284 122.37 40.168 48 62 76 61 121 39 3 3 4 3 4 2 14888 16831 852 16171 39077;39078;39079 45293;45294;45295;45296;45297 45296 5 RQGLEQFINK Unmodified 1231.6673 0.6673199 1259 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493 Snx12 Sorting nexin-12 yes no 0 0 0 1 9 0 1 53.586 53.586 3 0.0028633 14797 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.962 30.774 108.68 79.954 61.605 75.876 70.949 86.453 102 83 65 74 74 83 1 1 1 1 1 1 7254.3 16832 1259 16172 39080 45298 45298 1 RQLEEAEEEAQR Unmodified 1486.7012 0.7011988 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 1 1 0 1 39.933 39.933 3 0.0013014 11157 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.023 32.241 19.01 28.055 27.241 28.644 17.88 19.744 18 28 28 28 19 19 1 1 1 1 1 1 3356.3 16833 2696 16173 39081 45299 45299 1 RQLPVTR Unmodified 868.52428 0.52428448 1564;1563 P47753;Q5RKN9;P47754 Capza1;Capza2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 no no 0 0 0 1 8 0 1 28.329 28.329 3 0.034128 4468 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.038 27.644 39.314 36.142 34.421 0 58.576 0 37 37 34 0 56 0 1 1 1 0 1 0 7398.7 16834 1563;1564 16174 39082 45300 45300 1 RQPAPPR Unmodified 820.46677 0.4667696 2935 Q9CQM8 Rpl21 yes yes 0 0 0 1 8.33 3.4 1 1 1 20.271 20.271 3 0.0088617 2853 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.61 62.108 0 21.945 38.636 32.131 28.855 33.635 0 21 37 32 29 32 0 2 2 3 2 2 3950.2 16835 2935 16175 39083;39084;39085 45301;45302;45303 45301 3 RQQEEEER Unmodified 1102.5003 0.50031415 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 1 13 0 1 15.582 15.582 3 0.0014415 2590 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.24 64.551 0 3.1228 4.1406 0 4.184 0 0 3 4 0 4 0 0 1 1 0 1 0 577.69 16836 2148 16176 39086 45304 45304 1 RQQETAAAETETR Unmodified 1489.7121 0.71209784 1898 Q0VGU4 Vgf yes yes 0 0 0 1 1 0 1 24.359 24.359 3 0.010603 4275 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.897 35.909 0 0 9.738 0 0 9.594 0 0 9 0 0 9 0 0 1 0 0 1 2709.3 16837 1898 16177 39087 45305 45305 1 RQQQIER Unmodified 956.51518 0.51517635 472;33 A2AIS0;A2AIR9;A2AIR7;O55017;A0A1L1SQZ2;A0A087WS83;Q61290;E9QK20;A0A1D5RLU3 Cacna1b;Cacna1e Voltage-dependent N-type calcium channel subunit alpha-1B;Voltage-dependent R-type calcium channel subunit alpha-1E no no 0 0 0 1 4 0 1 18.488 18.488 3 0.0083986 2597 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.82 38.199 20.203 7.8072 24.316 0 13.816 24.124 19 9 23 0 14 23 1 1 1 0 1 1 1153.9 16838 472;33 16178 39088 45306 45306 1 RQVQGMQSSQQR Unmodified 1431.7001 0.70009337 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 1 8.67 3.09 1 1 1 23.158 23.158 3 3.2329E-12 3573 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.26 97.914 0 14.162 23.94 14.285 27.634 29.059 0 14 23 14 28 28 0 2 2 1 2 2 3446.1 16839 3324 16179 39089;39090;39091 45307;45308;45309 45309 3 RSEAEEGEVR Unmodified 1160.5422 0.54217896 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14;A0A2R8VHB6 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 1 13 0 1 22.457 22.457 3 0.0024663 3343 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.062 42.5 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 1288.8 16840 526 16180 39092 45310 45310 1 RSEGHEQTPAAHAQGTGPEGGK Unmodified 2201.021 0.020969812 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 3 0 1 30.29 30.29 5 0.0045685 7429 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.538 18.853 20.149 0 39.932 0 56.618 57.014 19 0 37 0 56 55 1 0 1 0 1 1 2410.3 16841 2295 16181 39093 45311 45311 1 RSESPFEGK Unmodified 1035.4985 0.49852324 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 8 3.56 1 1 1 38.227 38.227 3 0.001615 10260 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.752 40.774 157.92 235.18 435.38 263.35 486.66 279.64 149 232 427 259 486 269 2 2 3 2 3 2 29711 16842 1382 16182 39094;39095;39096 45312;45313;45314 45314 3 RSNIWLAAVTK Unmodified 1257.7194 0.71935547 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 1 12 0 1 60.075 60.075 3 0.0037538 14200 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.532 21.595 69.086 43.045 74.216 65.577 55.564 0 65 46 74 65 56 0 1 1 1 1 1 0 5498 16843 1836 16183 39097 45315 45315 1 RSPLTYGVGVLNR Unmodified 1430.7994 0.7993967 2585;3003 Q8K0U4;Q9CZJ2 Hspa12a;Hspa12b Heat shock 70 kDa protein 12A;Heat shock 70 kDa protein 12B no no 0 0 0 1 11 0.816 1 1 1 53.554 53.554 3 4.4934E-12 13126 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.844 68.734 138.6 0 149.7 45.245 180.51 43.77 130 0 139 42 176 42 1 0 1 1 2 1 55967 16844 2585;3003 16184 39098;39099;39100 45316;45317;45318 45316 3 RSPNEEYVEVGR Unmodified 1433.6899 0.68990583 745 D3Z0V6;P12849 Prkar1b cAMP-dependent protein kinase type I-beta regulatory subunit yes no 0 0 0 1 3.5 0.5 1 1 36.781 36.781 3 0.00049345 10529 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.192 39.171 29.952 18.196 30.296 40.441 0 59.696 28 19 28 37 0 56 1 1 1 1 0 2 6629.5 16845 745 16185 39101;39102 45319;45320 45319 2 RSPTSSPTPQR Unmodified 1212.6211 0.62109799 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;P39053;F6RRH9;F6TH70 Dnm1 Dynamin-1 no no 0 0 0 1 9 2.74 1 1 1 1 1 1 1 1 22.064 22.064 3 2.6677E-08 3472 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.55 77.41 64.061 77.887 100.59 79.981 130.54 115.96 60 77 100 78 131 111 4 4 6 6 7 6 143910 16846 118;1534;988 16186 39103;39104;39105;39106;39107;39108;39109;39110 45321;45322;45323;45324;45325;45326;45327;45328;45329;45330 45328 10 RSYASETVVR Unmodified 1166.6044 0.60438529 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 1 13 0 1 31.117 31.117 3 0.018122 7139 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.578 31.489 99.074 51.625 76.471 0 97.278 0 93 56 74 0 93 0 1 1 1 0 1 0 7350.9 16847 1304 16187 39111 45331 45331 1 RTDDIPVWDQEFLK Unmodified 1760.8733 0.87334951 3325 Q9WTX5 Skp1 S-phase kinase-associated protein 1 yes yes 0 0 0 1 6 0 2 71.493 71.493 3;4 2.16E-21 25490 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.39 88.761 196.97 71.526 197.33 163.68 160.81 184.97 185 74 194 158 167 176 2 1 2 1 2 1 20409 16848 3325 16188 39112;39113 45332;45333 45332 2 RTDPDGPHSDR Unmodified 1251.5592 0.55922601 2338 Q80YA7;A0A1L1STG9 Dpp8 Dipeptidyl peptidase 8 yes no 0 0 0 1 1 0 1 17.826 17.826 4 0.00069824 2754 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.815 52.594 0 0 4.328 0 0 4.264 0 0 4 0 0 4 0 0 1 0 0 1 1086.5 16849 2338 16189 39114 45334 45334 1 RTGAIVDVPVGEELLGR Unmodified 1779.9843 0.98429694 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 6 0 1 65.946 65.946 3 0.00062743 22844 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.292 29.571 78.844 42.664 57.635 0 37.384 38.375 74 46 56 0 37 37 1 1 1 0 1 1 8834.3 16850 1881 16190 39115 45335 45335 1 RTPFGAYGGLLK Unmodified 1278.7085 0.70845643 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 1 11.7 0.471 1 2 60.995 60.995 3;4 0.00017766 14613 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.305 31.946 89.767 85.99 82.862 36.712 122.56 106.86 84 84 83 37 121 102 2 2 2 1 2 2 34526 16851 2472 16191 39116;39117;39118 45336;45337;45338 45337 3 RTPSEAER Unmodified 944.46756 0.46755746 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 1 3 0 1 18.462 18.462 3 0.0085736 2655 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.099 41.041 0 0 0 9.6092 12.111 0 0 0 0 9 12 0 0 0 0 1 1 0 1604.5 16852 1171 16192 39119 45339 45339 1 RVAEDDEDDDVDTK Unmodified 1620.6751 0.67510321 1456 P26350 Ptma Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha yes yes 0 0 0 1 1 0 1 37.942 37.942 3 0.0095231 10328 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.024 27.446 0 20.216 0 20.234 28.359 0 0 19 0 19 28 0 0 1 0 1 1 0 2111 16853 1456 16193 39120 45340 45340 1 RVDIEVLPQELQQALTFALPDPSR Unmodified 2734.4654 0.4653792 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 1 8 0 1 98.854 98.854 4 0.031018 35394 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 29.269 11.445 6.4189 0 3.2136 0 0 0 6 0 3 0 0 0 1 0 1 0 0 0 514.29 16854 204 16194 39121 45341 45341 1 RVEIMEEESEQ Unmodified 1377.6082 0.60820962 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 1 2.5 0.5 1 1 48.203 48.203 2 1.7542E-06 15409 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.309 70.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16855 853 16195 39122;39123 45342;45343 45342 2 RVESQLK Unmodified 858.49232 0.49231565 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 7 1 1 1 34.061 34.061 3 0.0036847 7959 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.55 17.185 1164.5 719.62 787.2 847.92 1296 1271 1093 737 795 841 1318 1227 2 1 1 2 2 2 97410 16856 1312 16196 39124;39125 45344;45345 45344 2 RVHPISTMIK Unmodified 1180.675 0.67504781 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1 10.5 0.5 1 1 42.059 42.059 3;4 0.0010742 8652 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.376 45.633 127.74 157.81 37.096 128.64 199.87 221.35 120 157 37 120 204 213 2 2 1 1 2 2 11856 16857 1315 16197 39126;39127 45346;45347 45346 2 RVIISAPSADAPMFVMGVNHEK Unmodified 2368.2032 0.20315662 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 8.33 0.471 2 1 65.429 65.429 4;5 0.00019012 21184 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.058 22.52 236.84 176.62 79.67 39.601 176.37 241.21 222 176 74 37 176 231 3 2 1 1 2 3 18521 16858 1395;3448 16198 39128;39129;39130 45348;45349;45350 45349 3 RVLQALEGLK Unmodified 1125.687 0.68699271 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722;D3YUG3 Rps19 40S ribosomal protein S19 yes no 0 0 0 1 11 0 1 64.899 64.899 3 0.0086402 17745 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.518 16.209 0 0 136.49 93.514 0 88.478 0 0 130 93 0 83 0 0 1 1 0 1 4789.7 16859 3013 16199 39131 45351 45351 1 RVPDITECK Unmodified 1116.5597 0.55974328 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 1 13 0 1 44.418 44.418 3 0.058097 13665 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.44 20.041 190.95 222.27 0 0 253.83 253.93 179 221 0 0 251 245 1 1 0 0 1 1 32880 16860 3151 16200 39132 45352 45352 1 RVQALQQR Unmodified 997.57811 0.57811096 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 1 8 0 1 27.16 27.16 3 0.0057905 4182 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.114 40.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16861 2054 16201 39133 45353 45353 1 RVQQSSGPA Unmodified 928.47264 0.47264284 1707 P62073 Timm10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 1 5 0 1 23.241 23.241 2 0.04202 3660 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.282 55.736 14.979 8.566 0 0 0 0 14 9 0 0 0 0 1 1 0 0 0 0 1596.2 16862 1707 16202 39134 45354 45354 1 RVTIMPK Unmodified 843.50004 0.50004356 1300 P84244;P02301;F8WI35;A0A1W2P768;P84228;P68433 H3f3a;H3f3c;Hist1h3b;Hist1h3a Histone H3.3;Histone H3.3C;Histone H3;Histone H3.2;Histone H3.1 yes no 0 0 0 1 10 0 1 43.597 43.597 3 0.018579 9159 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.119 32.332 663.98 555.35 825.99 770.52 0 554.32 626 577 829 750 0 520 1 1 1 1 0 1 61389 16863 1300 16203 39135 45355 45355 1 RVTNDAR Unmodified 830.43586 0.4358634 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 1 5 0 1 16.68 16.68 3 0.036716 2451 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.69 30.117 14.897 8.3379 13.977 13.376 0 12.792 14 9 14 13 0 12 1 1 1 1 0 1 1462.6 16864 1681 16204 39136 45356 45356 1 RWEVAALR Unmodified 999.5614 0.56139826 3117 Q9DB77;A0A140LI98 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes no 0 0 0 1 7.5 0.5 1 1 47.996 47.996 3 0.0021613 12852 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.07 25.639 168.75 70.872 71.075 95.215 116.87 213.06 158 74 74 93 120 203 2 1 1 1 1 2 29706 16865 3117 16205 39137;39138 45357;45358 45358 2 RWPVVGVR Unmodified 967.57157 0.57156902 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 1 11.5 0.5 1 1 47.107 47.107 3 0.0033894 9352 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.9 80.641 297.27 144.79 49.573 0 138.39 252.96 278 148 46 0 139 241 4 2 1 0 2 3 47106 16866 2179 16206 39139;39140 45359;45360;45361;45362 45362 4 RWTQLLANSATR Unmodified 1415.7633 0.76334555 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 1 0 1 56.278 56.278 3 0.0039596 17718 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.595 26.341 49.358 0 0 39.22 64.897 37.59 46 0 0 37 65 37 1 0 0 1 1 1 6943.7 16867 551 16207 39141 45363 45363 1 RYDDPEVQK Unmodified 1148.5462 0.54620171 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 1 4.33 0.471 2 1 38.632 38.632 3;4 0.0014598 10415 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.111 58.39 216.99 238.05 160.04 190.79 99.525 234.88 204 240 166 185 102 223 2 3 2 3 1 2 19646 16868 1533 16208 39142;39143;39144 45364;45365;45366 45366 3 RYDEIVK Unmodified 921.49198 0.4919813 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 1 7.75 3.11 1 1 1 1 43.344 43.344 3 0.013682 11577 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.933 38.023 746.93 211.74 1061.2 937.35 1426.2 1382.4 702 199 1012 940 1450 1335 2 1 2 3 3 3 113350 16869 1729 16209 39145;39146;39147;39148 45367;45368;45369;45370 45369 4 RYEEIVK Unmodified 935.50763 0.50763136 1341 P10126;D3Z3I8;D3YZ68 Eef1a1 Elongation factor 1-alpha 1 yes no 0 0 0 1 5.5 0.5 1 1 42.662 42.662 3 0.023201 11926 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.732 17.05 226.54 249.6 276.47 204.99 80.168 393.2 213 241 269 204 83 371 2 2 2 2 1 3 64382 16870 1341 16210 39149;39150 45371;45372;45373 45373 3 RYEVPLETPR Unmodified 1258.667 0.66698555 1821 P70699;A2AFL3 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 1 5 0 1 46.042 46.042 3 0.0084045 14056 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.641 32.628 0 29.792 0 40.441 0 0 0 28 0 37 0 0 0 1 0 1 0 0 4214.2 16871 1821 16211 39151 45374 45374 1 RYNIIPVLSDILQESVK Unmodified 1986.115 0.11497676 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 1 10 0 1 92.179 92.179 3 0.00049611 29996 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.595 40.106 0 0 14.512 33.272 8.7584 0 0 0 14 33 9 0 0 0 1 2 1 0 4002 16872 65 16212 39152 45375;45376 45375 2 RYPSGEER Unmodified 992.46756 0.46755746 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 1 9 4 1 1 22.378 22.378 3 0.0071355 3336 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.205 43.37 63.98 0 67.288 61.051 27.585 0 60 0 65 60 28 0 2 0 2 2 1 0 8293.1 16873 2614 16213 39153;39154 45377;45378 45378 2 SAAAEAEAILQDAVSK Unmodified 1572.7995 0.79951586 3239 Q9JKY5 Hip1r Huntingtin-interacting protein 1-related protein yes yes 0 0 0 0 5 0 1 84.905 84.905 3 0.043855 32245 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 32.191 14.702 0 0 29.01 28.875 0 0 0 0 28 28 0 0 0 0 1 1 0 0 1789.4 16874 3239 16214 39155 45379 45379 1 SAAAEER Unmodified 732.34023 0.34023168 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 7 6 1 1 19.254 19.254 2 0.025583 2895 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.45 49.485 9.491 26.802 13.295 24.97 24.976 18.475 9 26 14 24 25 18 1 2 1 2 1 2 2367.2 16875 879 16215 39156;39157 45380;45381 45381 2 SAAAGALGSPGLPLRK Unmodified 1464.8413 0.84126152 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 1 9 0 1 54.826 54.826 3 0.035039 15455 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.753 14.305 129.08 38.678 93.444 94.529 82.476 0 121 46 93 93 83 0 1 1 1 1 1 0 4727.6 16876 1669 16216 39158 45382 45382 1 SAAALLSPIK Unmodified 969.58588 0.58588168 3450;8 A0A087WNU5;S4R2K9 Ank3 no no 0 0 0 0 10 0 1 65.563 65.563 2 3.7167E-05 18419 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.68 91.266 48.999 0 60.345 0 84.521 66.878 46 0 56 0 83 65 1 0 1 0 1 1 5501.2 16877 8;3450 16217 39159 45383 45383 1 SAAARPVSR Unmodified 913.50936 0.50936269 2287 Q7TNL9 Chchd10 yes yes 0 0 0 1 7 0 1 20.134 20.134 3 0.0017715 2985 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.098 40.232 8.515 0 11.598 5.8668 0 12.792 8 0 11 6 0 12 1 0 1 1 0 1 562.87 16878 2287 16218 39160 45384 45384 1 SAAASGGPR Unmodified 772.38277 0.3827652 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 0 5 0 1 20.359 20.359 2 0.0066024 2874 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.713 50.795 0 12.672 5.7317 0 15.69 0 0 12 6 0 15 0 0 1 1 0 1 0 774.32 16879 1171 16219 39161 45385 45385 1 SAADDYNR Unmodified 910.37807 0.37807375 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 2.5 0.5 1 1 26.539 26.539 2 0.0012031 5553 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 136.8 101.97 103.31 59.798 79.711 37.236 125.43 105.15 97 64 79 37 125 102 2 2 2 1 2 2 15736 16880 2225 16220 39162;39163 45386;45387 45386 2 SAADIIALAR Unmodified 999.57129 0.57129425 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 7.33 1.25 1 1 1 66.163 66.163 2 3.7865E-05 20787 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.31 70.77 207.85 0 378.1 305.64 334 312.68 195 0 363 306 343 298 2 0 3 3 3 2 89276 16881 1850;2212 16221 39164;39165;39166 45388;45389;45390 45390 3 SAADLISQAR Unmodified 1030.5407 0.5407224 836 Q3TT92;E9PWE8;Q62188;D3YUS0;D3Z567 Dpysl3 Dihydropyrimidinase-related protein 3 yes no 0 0 0 0 9.5 3.5 1 1 51.436 51.436 2;3 5.8007E-05 16715 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.36 66.105 29.987 0 9.5868 0 67.031 27.935 28 0 9 0 65 28 1 0 1 0 1 1 3124.1 16882 836 16222 39167;39168 45391;45392 45392 2 SAAESISESVPVGPK Unmodified 1456.7409 0.74093835 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 5.5 0.5 1 1 57.644 57.644 3 1.1011E-05 19702 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.529 51.431 158.16 144.02 166.84 74.894 61.205 185.87 149 148 166 74 65 176 2 2 2 1 1 2 36449 16883 1641 16223 39169;39170 45393;45394 45393 2 SAAETSAQHAEK Unmodified 1228.5684 0.56839372 3450;8 A0A087WNU5;S4R2K9;S4R208 Ank3 no no 0 0 0 0 4 0 1 28.377 28.377 3 0.0050973 6135 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.013 34.439 0 9.2562 19.128 19.627 0 20.254 0 9 19 19 0 19 0 1 1 1 0 1 1093 16884 8;3450 16224 39171 45395 45395 1 SAAETVTK Unmodified 805.41815 0.41814765 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 6.67 2.98 1 2 1 1 1 36.897 36.897 2;3 0.0011636 8435 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.48 42.012 634.54 411.91 852.3 500.03 950.6 1026.1 597 429 834 502 958 988 7 4 7 6 6 8 194090 16885 2175 16225 39172;39173;39174;39175;39176;39177 45396;45397;45398;45399;45400;45401;45402;45403 45402 8 SAAEVIAQAR Unmodified 1014.5458 0.54580778 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7.33 2.75 2 1 1 1 1 46.187 46.187 2;3 5.8564E-12 13558 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 169.21 106.66 1329.9 1163.5 1335.4 889.02 1738.3 1476.8 1252 1195 1329 893 1746 1426 9 8 9 7 9 8 874930 16886 1158 16226 39178;39179;39180;39181;39182;39183 45404;45405;45406;45407;45408;45409;45410;45411;45412;45413 45406 10 SAAGSSSGFHSWAR Unmodified 1406.6327 0.63272531 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 7.5 0.5 1 1 38.068 38.068 3 8.8329E-05 8305 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.879 59.046 0 97.901 102.91 35.47 92.701 85.833 0 93 102 37 93 83 0 1 2 1 2 2 6200.3 16887 1415 16227 39184;39185 45414;45415 45415 2 SAAKPWSPVAK Unmodified 1140.6291 0.62914348 110 A0A0J9YTU3;Q5SXY1;A0A0J9YUF8 Specc1 Cytospin-B yes no 0 0 0 1 10 0 1 50.218 50.218 3 0.001752 11769 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.522 44.025 63.985 0 66.388 81.241 61.096 92.065 60 0 65 79 65 88 1 0 1 1 1 1 7024.1 16888 110 16228 39186 45416 45416 1 SAALLLQNDHNADVQSK Unmodified 1822.9173 0.91733959 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 7 0 1 52.818 52.818 4 9.0124E-05 15836 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.691 44.858 59.224 83.068 74.785 0 0 59.696 56 83 74 0 0 56 1 1 1 0 0 1 5954.2 16889 3449;3451;3452 16229 39187 45417 45417 1 SAAQAAAQTNSNAAGK Unmodified 1459.7015 0.70153315 128 A0A0N4SWH2;A0A0N4SV32;Q3UMP4;Q9CY58;A0A0N4SUQ1;A0A0N4SUN8 Serbp1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 0 6.5 0.5 1 1 35.667 35.667 3 2.352E-05 8618 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.435 74.106 30.006 7.5527 19 29.749 45.439 38.145 28 9 19 28 46 37 1 1 1 1 1 1 5084.7 16890 128 16230 39188;39189 45418;45419 45418 2 SAAQDLDR Unmodified 874.41446 0.41445926 17 B8QI36;A0A087WPM2;A0A087WPJ3 Ppfia4 yes no 0 0 0 0 2 0 1 31.464 31.464 2 0.027894 7701 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.573 13.136 20.265 0 20.456 0 0 29.848 19 0 19 0 0 28 1 0 1 0 0 1 2433.3 16891 17 16231 39190 45420 45420 1 SAASGIPYHSEVPVSLK Unmodified 1740.9046 0.90464964 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 7 0.707 1 2 1 57.894 57.894 3;4 1.953E-09 19067 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.31 93.439 226.39 257.99 202.69 149.32 357.84 375.68 213 260 205 148 361 362 3 4 3 2 4 4 60872 16892 2148 16232 39191;39192;39193;39194 45421;45422;45423;45424 45421 4 SAASYALGSISVGNLPEYLPFVLQEITSQPK Unmodified 3278.7075 0.70745996 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9 0 2 111.74 111.74 4;5 1.1513E-05 37829 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.137 34.234 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 4478.3 16893 2264 16233 39195;39196 45425;45426 45426 2 SAATWDER Unmodified 934.41446 0.41445926 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 4 0 1 38.328 38.328 2 0.011271 10704 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.114 24.116 69.27 94.281 0 0 0 0 65 93 0 0 0 0 1 1 0 0 0 0 45925 16894 2148 16234 39197 45427 45427 1 SACKEDIPSEK Unmodified 1262.5813 0.58126659 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 1 7 3.16 1 1 1 1 1 41.595 41.595 3 0.0041802 10633 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.924 20.883 305.9 275.37 610.95 258.85 213.15 492.81 287 263 592 255 214 468 3 1 4 2 2 4 68358 16895 2143 16235 39198;39199;39200;39201;39202 45428;45429;45430;45431;45432 45431 5 SADCSVEEEPWK Unmodified 1435.5926 0.59255956 1544 P43006 Slc1a2 Excitatory amino acid transporter 2 yes yes 0 0 0 0 4.8 4.17 2 1 1 1 55.377 55.377 3 2.3686E-15 18866 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.99 108.1 266.57 302.41 194.74 387.96 324.35 375.61 250 298 204 370 333 360 3 5 3 4 5 5 77023 16896 1544 16236 39203;39204;39205;39206;39207 45433;45434;45435;45436;45437;45438 45437 6 SADCSVEEEPWKR Unmodified 1591.6937 0.69367058 1544 P43006 Slc1a2 Excitatory amino acid transporter 2 yes yes 0 0 0 1 5.8 3.66 1 2 1 1 47.612 47.612 3;4 1.207E-18 14903 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.02 121.1 906.27 634.67 1142 844.97 895.77 986.77 849 645 1122 841 910 943 6 4 6 5 5 4 263880 16897 1544 16237 39208;39209;39210;39211;39212 45439;45440;45441;45442;45443;45444;45445;45446 45445 8 SADCSVQTDDEDNADWEQPVR Unmodified 2435.9772 0.97717525 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 1 0 2 53.232 53.232 3;4 2.8464E-23 16453 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.14 128.7 40.629 18.848 8.3255 49.822 55.976 9.0625 38 19 9 47 56 9 2 1 1 2 2 1 8493.6 16898 1275 16238 39213;39214 45447;45448 45447 2 SADCSVQTDDEDNADWEQPVRR Deamidation (N) 2593.0623 0.062301858 1275 O88737 Bsn Protein bassoon yes yes 0 1 0 1 1 0 1 46.801 46.801 3 0.00025897 13873 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.392 37.273 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16899 1275 16239 39215 45449 45449 347 1 SADESGQALLAASHYASDEVR Unmodified 2176.0033 0.0032540621 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5.43 3.25 2 2 1 1 1 60.482 60.482 3 2.8465E-109 20956 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 183.71 158.82 157.99 125.28 111.68 158.63 45.159 98.906 148 127 112 152 46 93 4 4 2 5 2 3 149170 16900 551 16240 39216;39217;39218;39219;39220;39221;39222 45450;45451;45452;45453;45454;45455;45456;45457 45455 8 SADEVLFSGVK Unmodified 1150.587 0.58700389 3096 Q9D8U8 Snx5 Sorting nexin-5 yes yes 0 0 0 0 9.5 3.5 1 1 65.754 65.754 2;3 0.0018574 22926 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.03 31.029 69.745 0 0 0 46.111 58.38 65 0 0 0 46 56 1 0 0 0 1 1 4687.1 16901 3096 16241 39223;39224 45458;45459 45458 2 SADMVALDGFLYR Unmodified 1456.7021 0.70205043 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 7 0 1 80.393 80.393 3 0.00070659 28828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.65 38.024 0 20.216 0 9.837 0 20.254 0 19 0 9 0 19 0 1 0 1 0 1 1855.6 16902 2438 16242 39225 45460 45460 1 SADTLWDIQK Unmodified 1175.5823 0.58225287 1389 P16125 Ldhb L-lactate dehydrogenase B chain yes yes 0 0 0 0 8 2.61 2 1 1 1 67.444 67.444 2;3 1.1342E-37 22788 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 200.6 131.01 454.95 531.98 350.53 614.4 879.87 787.18 427 528 357 593 894 762 4 5 2 4 6 6 183420 16903 1389 16243 39226;39227;39228;39229;39230 45461;45462;45463;45464;45465;45466 45463 6 SADTLWGIQK Unmodified 1117.5768 0.57677356 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 9 2.1 1 2 1 1 65.516 65.516 2;3 8.2291E-10 21155 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.56 109.22 385.13 380.76 198.07 282.49 524.62 519.1 361 380 194 269 531 501 3 4 2 2 4 4 177170 16904 1315 16244 39231;39232;39233;39234;39235 45467;45468;45469;45470;45471 45468 5 SADTLWNMQK Unmodified 1192.5547 0.55465791 1293 P00342;A0A1B0GRE9 Ldhc L-lactate dehydrogenase C chain yes no 0 0 0 0 8 0 1 67.414 67.414 3 0.010154 22091 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.608 29.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16905 1293 16245 39236 45472 45472 1 SADTQSISR Unmodified 963.46214 0.46213773 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 6.25 3.96 1 1 1 1 28.885 28.885 2 5.9051E-13 6829 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 178.94 110.62 142.41 107.24 272.47 327.68 77.92 9.0754 134 112 269 316 79 9 3 3 3 4 2 1 52107 16906 2179 16246 39237;39238;39239;39240 45473;45474;45475;45476 45473 4 SADYVNLALK Unmodified 1092.5815 0.58152458 2968;889 Q9CS84;E0CY11;E9Q2X2;Q6P9K9 Nrxn1;Nrxn3 Neurexin-1;Neurexin-3 no no 0 0 0 0 7.5 0.5 1 1 64.709 64.709 2 6.25E-05 21428 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.24 53.561 0 0 60.592 49.643 100.12 125.06 0 0 56 46 102 120 0 0 1 1 2 2 6892.8 16907 2968;889 16247 39241;39242 45477;45478 45477 2 SADYVVTGAWSAK Unmodified 1353.6565 0.65648044 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 8.67 3.09 1 1 1 63.933 63.933 2;3 2.3348E-12 21213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.21 76.615 176.88 124.67 103.13 82.522 181.07 251.74 166 130 102 83 185 241 2 2 1 1 2 2 14535 16908 2840 16248 39243;39244;39245 45479;45480;45481 45480 3 SAEAASGR Unmodified 747.35113 0.35113072 461 A2AG50 Map7d2 MAP7 domain-containing protein 2 yes yes 0 0 0 0 3 0 1 18.454 18.454 2 0.021569 2644 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.318 34.403 0 14.82 4.5208 0 0 0 0 14 5 0 0 0 0 1 1 0 0 0 1423.8 16909 461 16249 39246 45482 45482 1 SAEDLDLLNASFQDESK Unmodified 1880.864 0.86396661 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 4.5 0.5 1 1 75.852 75.852 3;4 7.2672E-13 28138 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.08 100.6 48.874 54.5 43.342 78.299 18.867 115.35 46 55 46 74 19 111 1 2 1 1 1 3 12941 16910 927 16250 39247;39248 45483;45484;45485 45485 3 SAEDYNSSNTLNVK Unmodified 1540.7005 0.7005301 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 0 9.5 3.5 1 1 49.775 49.775 3 9.4087E-05 15229 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.457 71.227 0 39.368 0 0 0 59.696 0 37 0 0 0 56 0 1 0 0 0 1 3071.2 16911 1099 16251 39249;39250 45486;45487 45486 2 SAEEAASVLATSISPEQCIK Unmodified 2090.0201 0.02014968 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 6 0 1 74.866 74.866 3 0.00012779 27088 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.348 27.306 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16912 934 16252 39251 45488 45488 1 SAEEGEVTESK Unmodified 1164.5146 0.51462681 1658 Z4YJL4;P58871 Tnks1bp1 182 kDa tankyrase-1-binding protein yes no 0 0 0 0 1.5 0.5 1 1 38.441 38.441 2;3 1.7614E-07 11163 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.83 76.409 30.044 28.813 58.581 6.3456 29.288 29.848 28 28 56 9 28 28 1 1 1 1 1 1 4380.8 16913 1658 16253 39252;39253 45489;45490 45490 2 SAEGGDADDK Unmodified 963.37813 0.37813333 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 1.5 0.5 1 1 30.203 30.203 2 0.026975 7200 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.859 19.772 20.265 20.216 20.456 0 0 78.884 19 19 19 0 0 74 1 1 1 0 0 2 2884.7 16914 1042 16254 39254;39255 45491;45492 45492 2 SAELGCTVDEVESLIK Unmodified 1748.8502 0.8502308 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4.5 0.5 1 1 86.763 86.763 3 1.4875E-08 32981 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 115.1 91.963 59.851 0 39.835 60.183 54.492 68.275 56 0 37 56 56 65 2 0 1 2 2 2 18457 16915 2186 16255 39256;39257 45493;45494;45495 45494 3 SAELPDAVGPIVQLQEK Unmodified 1792.9571 0.95707914 3284 Q9QYS9 Qki Protein quaking yes yes 0 0 0 0 5.5 0.5 1 1 75.093 75.093 3 0.00015614 27178 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.872 39.491 79.826 84.325 37.69 30.079 65.62 49.026 75 83 37 28 65 47 3 2 1 1 2 2 6448.7 16916 3284 16256 39258;39259 45496;45497;45498 45498 3 SAEPNAMAFAAGETFLVLER Unmodified 2123.0357 0.035740164 3193 Q9ESJ4;A0A0A6YWW3;A0A0A6YWU4 Nckipsd NCK-interacting protein with SH3 domain yes no 0 0 0 0 5 0 1 90.385 90.385 3 0.0072215 34318 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.205 23.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 856.02 16917 3193 16257 39260 45499 45499 1 SAEPSVFVR Unmodified 990.51345 0.51344502 1104;2286 Q7TNB5;P23818;F6YNQ1;G5E8H1 Gria1;Gria2 Glutamate receptor 1 no no 0 0 0 0 5 0 1 48.603 48.603 2 0.00082805 15301 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.64 74.571 138.41 97.531 99.551 95.716 0 138.58 130 102 102 93 0 130 1 1 1 1 0 1 13547 16918 2286;1104 16258 39261 45500 45500 1 SAEVDSDDTGGSAAQK Unmodified 1536.654 0.65397384 2139 Q61768 Kif5b Kinesin-1 heavy chain yes yes 0 0 0 0 2.5 0.5 1 1 38.305 38.305 3 6.4577E-33 11064 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 145.1 125.77 0 87.11 71.881 66.468 73.681 19.489 0 83 74 66 74 19 0 2 2 2 2 1 7113.8 16919 2139 16259 39262;39263 45501;45502 45501 2 SAEVPEAASAEEQKEMEDK Acetyl (Protein N-term) 2118.9263 0.92630887 1631 P56212 Arpp19 cAMP-regulated phosphoprotein 19 yes yes 1 0 0 1 1 0 1 58.309 58.309 3 1.2783E-07 18757 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.9 47.051 0 59.584 0 30.104 26.577 38.684 0 56 0 28 28 37 0 1 0 1 1 1 3967.7 16920 1631 16260 39264 45503 45503 1 SAFIGIGFTDR Unmodified 1182.6033 0.60332266 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 9 0 1 69.701 69.701 2 0.0025539 22484 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.148 46.927 0 214.4 159.17 0 174.68 0 0 204 159 0 167 0 0 1 1 0 1 0 21463 16921 2960 16261 39265 45504 45504 1 SAFTTSTVVR Unmodified 1067.5611 0.56112349 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 7.5 0.5 1 1 46.708 46.708 2 0.00018901 12300 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.009 77.384 98.25 0 78.308 28.387 65.358 38.681 92 0 74 28 65 37 2 0 2 1 2 1 6636.8 16922 2012 16262 39266;39267 45505;45506 45506 2 SAFTTVLTVSHK Unmodified 1289.698 0.69795133 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10.5 0.5 1 1 58.848 58.848 3 3.7676E-12 15042 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.37 94.525 78.984 82.986 130 59.13 110.46 85.326 74 83 130 56 111 83 1 1 1 1 1 1 58106 16923 570 16263 39268;39269 45507;45508 45508 2 SAGACTAAAFLR Unmodified 1194.5815 0.58154136 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 9.33 2.62 1 1 1 54.292 54.292 2 3.4281E-07 16040 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.66 62.305 176.69 143.59 117.56 86.638 168.37 67.799 166 148 121 83 167 65 2 2 2 1 2 1 10917 16924 2904 16264 39270;39271;39272 45509;45510;45511 45510 3 SAGDLGIAVCNVPAASVEETADSTLCHILNLYR Unmodified 3515.7025 0.70246772 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 7 0.816 1 1 1 99.361 99.361 4 0.00030161 37043 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.267 25.417 0 26.6 0 0 32.328 2.8426 0 25 0 0 31 3 0 2 0 0 2 1 6189.1 16925 114 16265 39273;39274;39275 45512;45513;45514 45512 3 SAGEAAAPEPR Unmodified 1054.5043 0.5043369 1644 Q3UN10;P56695 Wfs1 Wolframin yes no 0 0 0 0 1.75 0.829 2 1 1 30.264 30.264 2;3 0.0033916 6903 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 71.349 47.792 20.292 68.268 35.141 88.339 73.301 79.181 19 66 38 84 74 75 1 3 2 3 2 3 8815.1 16926 1644 16266 39276;39277;39278;39279 45515;45516;45517;45518 45516 4 SAGEDVTEK Unmodified 934.42436 0.42435524 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 3.5 0.5 1 1 37.607 37.607 2 0.00053458 10947 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.35 59.682 84.419 0 58.421 41.491 49.622 97.722 79 0 56 42 51 93 2 0 1 1 1 2 9429.4 16927 2235 16267 39280;39281 45519;45520 45519 2 SAGEGTLDVR Unmodified 1003.4934 0.49343786 15 G5E8E1;E9Q9T1;A0A087WPK3;A0A087WNU6 Lrrfip1 yes no 0 0 0 0 3 0 1 39.303 39.303 2 0.053536 11699 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.762 11.695 15.805 25.075 27.445 28.442 27.981 0 15 25 28 28 28 0 1 1 1 1 1 0 4133.2 16928 15 16268 39282 45521 45521 1 SAGGAVPPPPNPAVSFPAPR Acetyl (Protein N-term) 1926.9952 0.99519598 2411 Q8BI08 Mal2 Protein MAL2 yes yes 1 0 0 0 7.33 4.03 1 1 1 70.256 70.256 2;3 6.2108E-17 25506 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.514 60.83 59.958 25.749 0 0 38.702 19 56 28 0 0 37 19 1 1 0 0 1 1 27483 16929 2411 16269 39283;39284;39285 45522;45523;45524 45523 3 SAGGDFGNPLR Acetyl (Protein N-term) 1131.5309 0.530886 1515;1697 P35279;P61294 Rab6a;Rab6b Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 1 0 0 0 13 0 1 57.014 57.014 2 0.023711 19745 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.334 34.974 88.372 0 115.5 93.262 79.903 76.604 83 0 111 93 83 74 1 0 1 1 1 1 3555.7 16930 1515;1697 16270 39286 45525 45525 1 SAGHSQISR Unmodified 941.46789 0.46789181 2048 Q5H8C4;A0A286YCC3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 5 0 1 18.308 18.308 3 0.010636 2568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.064 21.513 0 9.576 0 0 6.276 0 0 9 0 0 6 0 0 1 0 0 1 0 550.4 16931 2048 16271 39287 45526 45526 1 SAGLFQNPK Unmodified 960.50288 0.50288033 3328 Q9WU84 Ccs Copper chaperone for superoxide dismutase yes yes 0 0 0 0 9 0 1 52.829 52.829 2 0.0086389 14462 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.954 20.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16932 3328 16272 39288 45527 45527 1 SAGPQSQLLASVIAEK Unmodified 1597.8675 0.86753585 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 9.25 2.28 1 1 1 1 74.59 74.59 3 2.6657E-38 28083 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.91 130.64 306 348.43 390.32 206.7 157.17 360.09 288 353 390 204 157 342 4 5 5 3 2 5 65613 16933 3275 16273 39289;39290;39291;39292 45528;45529;45530;45531;45532 45532 5 SAGVDDQENWHEGK Unmodified 1570.6648 0.6648133 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 3 0 1 41.815 41.815 3 0.00040355 12881 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.136 53.623 59.677 24.966 47.973 0 0 0 56 28 46 0 0 0 1 1 1 0 0 0 4276.2 16934 2904 16274 39293 45533 45533 1 SAGWVIPIGLLFCK Unmodified 1559.8534 0.85340611 2797 Q921I1;E9Q035;D3YYR8 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 1 0 2 102.84 102.84 3 2.6033E-11 34082 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.69 96.81 11.691 12.338 8.3104 22.386 3.8359 0 11 12 8 21 4 0 3 2 1 3 1 0 2122.8 16935 2797 16275 39294;39295 45534;45535;45536 45534 3 SAHFSTLAIK Unmodified 1073.5869 0.58694431 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 11 0 1 50.326 50.326 3 0.013476 11811 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.927 17.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16936 2543 16276 39296 45537 45537 1 SAHGYIAAHQSNTK Unmodified 1483.7168 0.71678929 2106 Q61036;A3KGC5;A3KGC4 Pak3 Serine/threonine-protein kinase PAK 3 yes no 0 0 0 0 7 0 1 29.81 29.81 4 0.001024 5369 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.248 37.489 34.224 22.164 0 0 32.149 38.525 32 23 0 0 32 37 1 1 0 0 1 1 1916.1 16937 2106 16277 39297 45538 45538 1 SAIGEGMTR Unmodified 920.43857 0.43856552 1741 P62814;Q91YH6 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 9.5 3.5 1 1 37.904 37.904 2 0.0081461 9890 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.732 52.734 148.91 0 39.884 108.39 184.65 143.47 139 0 37 102 186 139 2 0 1 1 2 1 42958 16938 1741 16278 39298;39299 45539;45540 45539 2 SAKEEIAEYR Unmodified 1194.5881 0.58806652 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 8 3.56 1 1 1 43.59 43.59 3 0.021037 12738 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.98 31.188 652.18 522.62 672.79 368.75 703.56 736.78 614 531 669 366 713 710 3 2 3 2 3 3 61091 16939 154 16279 39300;39301;39302 45541;45542;45543 45543 3 SALALAVK Unmodified 771.48544 0.48543935 3310 Q9R1P0;E9PW69 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 11.3 1.25 1 1 1 58.4 58.4 2 0.0053134 15400 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.89 45.467 286.82 290.96 494.24 139.47 444.31 490.47 270 293 480 139 447 472 2 2 3 1 2 2 57745 16940 3310 16280 39303;39304;39305 45544;45545;45546 45544 3 SALALVTGAGSGIGR Unmodified 1328.7412 0.74121312 1593 P50171 Hsd17b8 Estradiol 17-beta-dehydrogenase 8 yes yes 0 0 0 0 10.5 0.5 1 1 66.645 66.645 2;3 1.5802E-10 18464 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.71 93.569 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 9191.7 16941 1593 16281 39306;39307 45547;45548 45548 2 SALASVIMGLSPILGK Unmodified 1555.9008 0.90075023 2272 Q76MZ3;G3UWL2 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 0 13 0 1 100.38 100.38 3 1.27E-07 40512 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.74 88.492 39.666 6.9013 0 0 37.384 38.375 37 9 0 0 37 37 1 1 0 0 1 1 5896.6 16942 2272 16282 39308 45549 45549 1 SALDFGQSK Unmodified 951.46616 0.46616048 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 7 0 2 54.768 54.768 2;3 0.0016065 16664 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.677 37.633 118.3 109.42 42.366 66.429 111.17 85.306 111 111 46 65 112 83 2 2 1 2 2 2 8239.2 16943 3192 16283 39309;39310 45550;45551 45550 2 SALEAAHK Unmodified 825.43447 0.43446642 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 6 0 1 35.744 35.744 3 0.0041119 8660 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.677 23.269 301.68 244.81 305.02 294.22 359.08 328.74 284 254 309 292 367 318 1 1 1 1 1 1 14574 16944 1474 16284 39311 45552 45552 1 SALFAQINQGESITHALK Unmodified 1927.0163 0.016325351 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 9 0.816 2 2 2 70.004 70.004 3;4 1.2025E-09 22587 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.89 81.595 364.49 493.2 554.89 424.62 568.44 381.37 343 491 556 419 573 369 4 5 5 3 4 4 109170 16945 1536 16285 39312;39313;39314;39315;39316;39317 45553;45554;45555;45556;45557;45558 45556 6 SALFAQLNQGEAITK Unmodified 1589.8413 0.8413211 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 10.5 2.5 1 1 70.447 70.447 2;3 1.3569E-18 26101 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.14 102.91 0 0 20.558 0 29.288 0 0 0 19 0 28 0 0 0 1 0 1 0 20763 16946 2996 16286 39318;39319 45559;45560 45560 2 SALHAKPQGLILQYGTAGFR Unmodified 2127.1589 0.15890726 2473 Q8BWW3;Q9CYR6 Pgm3 Phosphoacetylglucosamine mutase yes no 0 0 0 1 12 0 1 61.574 61.574 4 0.00056768 14792 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.919 41.682 29.793 0 42.265 67.98 29.023 38.614 28 0 42 65 32 37 1 0 1 1 1 1 4757.2 16947 2473 16287 39320 45561 45561 1 SALIAALCGK Unmodified 1002.5532 0.55320134 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 12 0 1 70.429 70.429 2 5.3557E-05 17947 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.95 61.069 87.97 80.461 114.83 0 0 99.138 83 83 111 0 0 93 1 1 1 0 0 1 9632 16948 2725 16288 39321 45562 45562 1 SALLALGLK Unmodified 884.5695 0.56950333 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 0 0 0 0 6.5 5.5 1 1 74.537 74.537 3 0.0003204 19488 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.802 33.729 0 0 0 9.3254 101.2 48.26 0 0 0 9 102 46 0 0 0 1 2 1 7149.8 16949 3066 16289 39322;39323 45563;45564 45564 2 SALLDEK Unmodified 774.41233 0.41233399 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 5 0 1 51.218 51.218 2 0.026936 16570 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.142 28.354 59.808 55.551 0 0 0 69.29 56 56 0 0 0 65 1 1 0 0 0 1 2214.4 16950 1974 16290 39324 45565 45565 1 SALLDEKR Unmodified 930.51345 0.51344502 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 1 7 0 1 42.573 42.573 3 0.019546 11078 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.371 21.909 0 58.516 63.903 65.463 94.271 0 0 56 65 65 93 0 0 1 1 1 1 0 2468.5 16951 1974 16291 39325 45566 45566 1 SALLSVQYSSTSSDKPVVK Unmodified 1995.0524 0.052436086 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 1 9 0 1 60.723 60.723 3 3.698E-06 18227 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.809 54.608 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16952 2167 16292 39326 45567 45567 1 SALNSESASELELVAPAQAR Unmodified 2042.028 0.02801225 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 5 0 1 65.76 65.76 3 8.8877E-07 23308 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.167 44.678 20.387 0 0 20.767 0 29.848 19 0 0 19 0 28 1 0 0 1 0 1 4009.6 16953 721 16293 39327 45568 45568 1 SALPAQSAATLPAR Unmodified 1352.7412 0.74121312 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 49.138 49.138 2;3 4.8319E-26 15605 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.37 86.587 227.68 185.76 109.69 294.27 324.42 271.07 213 185 111 280 334 260 2 2 2 3 4 2 43235 16954 2148 16294 39328;39329;39330 45569;45570;45571;45572;45573 45573 5 SALQDEADKPYSSGSR Unmodified 1709.7857 0.78565671 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 1 5 0 1 42.857 42.857 3 0.012581 12560 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.297 32.242 0 0 0 60.532 35.921 0 0 0 0 56 37 0 0 0 0 1 1 0 3539.6 16955 3285 16295 39331 45574 45574 1 SALSTVR Unmodified 732.413 0.41300269 571 B1AQF4;Q9D7X3;Q3V2Y9;H3BKD1 Dusp3 Dual specificity protein phosphatase 3 yes no 0 0 0 0 6 0 1 35.162 35.162 2 0.027087 8392 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.777 32.965 60.088 0 0 0 103.06 105.79 56 0 0 0 102 102 1 0 0 0 1 1 4791.8 16956 571 16296 39332 45575 45575 1 SALTIQFFQK Unmodified 1181.6445 0.64445919 759 D3Z2V6;O08989 Mras Ras-related protein M-Ras yes no 0 0 0 0 11 0 2 75.044 75.044 2;3 2.59E-05 22221 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.06 77.907 46 57.96 97.149 0 0 78.884 46 56 93 0 0 74 1 1 1 0 0 1 18494 16957 759 16297 39333;39334 45576;45577 45576 2 SALTIQLIQNHFVDEYDPTIEDSYR Unmodified 2966.4298 0.42978155 2126;1505 P32883;C0H5X4;Q61411 Kras;Hras GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 0 7 0.707 1 2 1 82.132 82.132 3;4 4.2389E-29 29654 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.08 111.35 0 57.891 28.537 0 47.137 28.503 0 56 28 0 46 28 0 3 1 0 1 1 18094 16958 1505;2126 16298 39335;39336;39337;39338 45578;45579;45580;45581 45579 4 SALTIQLIQNHFVDEYDPTIEDSYRK Unmodified 3094.5247 0.52474457 2126;1505 P32883;C0H5X4;Q61411 Kras;Hras GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 1 8 0 1 76.867 76.867 4 0.0018265 26578 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.574 26.321 20.292 18.848 0 30.604 0 29.848 19 19 0 28 0 28 1 1 0 1 0 1 3130.3 16959 1505;2126 16299 39339 45582 45582 1 SALTVQFVQGIFVEK Unmodified 1664.9138 0.91375776 79 A0A0G2JDL9;Q99JI6;P62835;A0A0G2JE52;A0A0G2JED9 Rap1b;Rap1a Ras-related protein Rap-1b;Ras-related protein Rap-1A yes no 0 0 0 0 9.2 4.12 1 3 1 87.877 87.877 3;4 7.0365E-06 27872 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.652 57.454 49.063 77.801 142.45 28 29.288 59.696 46 74 139 28 28 56 1 2 4 1 1 2 16478 16960 79 16300 39340;39341;39342;39343;39344 45583;45584;45585;45586;45587 45584 5 SALTVQFVTGSFIEK Unmodified 1625.8665 0.86647322 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 0 11 0 1 82.58 82.58 2 0.00021908 25837 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.451 41.438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16961 1695 16301 39345 45588 45588 1 SALTVQFVTGTFIEK Unmodified 1639.8821 0.88212328 2346;2460 Q80ZJ1;Q8BU31 Rap2a;Rap2c Ras-related protein Rap-2a;Ras-related protein Rap-2c no no 0 0 0 0 13 0 1 83.568 83.568 3 0.00072687 32536 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.513 40.19 59.511 0 97.033 73.914 62.972 47.239 56 0 93 74 65 46 1 0 1 1 1 1 3329.2 16962 2346;2460 16302 39346 45589 45589 1 SANEFSETESMLK Unmodified 1471.6501 0.65007443 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 5 0 1 63.369 63.369 3 3.0306E-05 22353 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.941 76.265 29.49 56.844 44.969 27.924 0 59.696 28 56 46 28 0 56 1 1 1 1 0 1 3108.6 16963 1446 16303 39347 45590 45590 1 SANIYPNFRPTPK Unmodified 1503.7834 0.78341229 2920 Q9CQC7 Ndufb4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 0 0 0 1 10.5 0.5 1 1 51.997 51.997 3 5.246E-05 12518 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.14 78.861 245.33 146.31 301.6 0 197.26 165.01 231 150 288 0 194 158 2 1 2 0 2 1 24316 16964 2920 16304 39348;39349 45591;45592 45591 2 SANLVAATLGAILNR Unmodified 1482.8518 0.85182621 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 3 4.47 5 1 95.133 95.133 2;3 8.1865E-33 33554 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 170.26 132.67 84.497 58.743 101.8 46.815 73.298 70.285 81 59 97 46 73 67 6 4 7 4 6 6 71733 16965 1055 16305 39350;39351;39352;39353;39354;39355 45593;45594;45595;45596;45597;45598;45599;45600;45601;45602;45603 45598 11 SANLVAATLGAILNR Deamidation (N) 1483.8358 0.83584179 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 1 0 0 11 0 2 102.94 102.94 3 0.0018694 31276 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.981 36.656 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2261.6 16966 1055 16305 39356;39357 45604;45605 45605 278 2 SANPAGAGSR Unmodified 886.42569 0.42569264 12 Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A0N4SUT7 Clasp1 CLIP-associating protein 1 yes no 0 0 0 0 5 0 1 22.347 22.347 2 0.037443 3388 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.084 18.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16967 12 16306 39358 45606 45606 1 SANSNPAMAPR Unmodified 1114.5189 0.5189411 1664 P60041 Sst Somatostatin;Antrin;Somatostatin-28;Somatostatin-14 yes yes 0 0 0 0 6 0 1 31.428 31.428 2 0.029815 6698 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.79 34.804 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 726.7 16968 1664 16307 39359 45607 45607 1 SANSPDGK Unmodified 774.3508 0.35079637 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 4.5 0.5 1 1 29.353 29.353 2 0.017341 6582 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.165 41.39 29.807 86.302 0 70.178 46.1 58.381 28 83 0 65 46 56 1 2 0 2 1 2 4520.8 16969 1652 16308 39360;39361 45608;45609 45608 2 SANTQVVR Unmodified 873.46683 0.46682918 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 9 4 1 1 28.159 28.159 2 0.010799 5709 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.027 49.033 48.889 54.691 95.487 36.158 85.157 0 46 56 93 37 83 0 1 2 2 1 2 0 10821 16970 2047 16309 39362;39363 45610;45611 45611 2 SAPAGSPHPAAGAR Acetyl (Protein N-term) 1287.632 0.63199703 2350 Q80ZX0 Sec24b yes yes 1 0 0 0 1.5 0.5 1 1 25.763 25.763 2 5.0639E-16 4761 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.142 71.048 9.5611 14.183 4.091 9.4243 8.9811 0 9 14 5 9 9 0 1 1 1 1 1 0 5299.4 16971 2350 16310 39364;39365 45612;45613 45612 2 SAPAQPPAEGTEGAAPGGGPPGPPPNMTSNR Acetyl (Protein N-term) 2908.341 0.34098332 671 Q62442;D3YTU0 Vamp1 Vesicle-associated membrane protein 1 yes no 1 0 0 0 1.5 0.5 1 1 55.151 55.151 3 7.911E-05 17208 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 40.254 30.723 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3695.7 16972 671 16311 39366;39367 45614;45615 45614 2 SAPCGSLAFSGDR Unmodified 1323.5877 0.58774895 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8 3.56 1 1 1 48.117 48.117 2 2.852E-13 15156 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.51 76.448 68.816 101.69 131.19 67.825 0 157.77 65 102 130 65 0 148 2 3 3 2 0 3 20436 16973 510 16312 39368;39369;39370 45616;45617;45618 45616 3 SAPDFTATAVVDGAFK Unmodified 1595.7831 0.78313752 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 7.22 3.61 1 2 1 2 1 2 75.219 75.219 2;3 8.9588E-33 28377 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.49 121.18 681.83 536.46 547.36 347.72 660.82 201.96 641 556 547 343 653 195 9 9 7 4 7 3 227430 16974 2116 16313 39371;39372;39373;39374;39375;39376;39377;39378;39379 45619;45620;45621;45622;45623;45624;45625;45626;45627;45628 45627 10 SAPDQEVR Unmodified 900.43011 0.43010932 3334 Q9WUL7 Arl3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 0 8 5 1 1 28.115 28.115 2 0.012128 6613 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.64 49.955 20.21 18.62 62.466 27.711 23.385 59.029 19 19 60 28 23 56 1 1 2 1 1 2 13611 16975 3334 16314 39380;39381 45629;45630 45629 2 SAPEVTAPGAPAYR Unmodified 1385.6939 0.69392858 728 D3YZ62;D3Z4J3;Q99104;B8JK05 Myo5a Unconventional myosin-Va yes no 0 0 0 0 4 0 1 47.41 47.41 2 1.2371E-10 15028 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.06 88.219 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 2703.5 16976 728 16315 39382 45631 45631 1 SAPGGGNKVPQK Unmodified 1138.6095 0.60947067 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 1 8 0 1 37.27 37.27 3 0.061064 7986 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.629 24.82 0 69.16 0 0 122.24 95.65 0 65 0 0 120 93 0 1 0 0 1 1 5212.6 16977 2056 16316 39383 45632 45632 1 SAPGGIR Unmodified 656.36057 0.36057319 2850 Q99KX1 Mlf2 Myeloid leukemia factor 2 yes yes 0 0 0 0 5 0 1 29.464 29.464 2 0.037494 6146 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.294 40.532 68.974 53.524 84.292 43.873 73.41 57.601 65 56 83 46 74 56 1 1 1 1 1 1 10079 16978 2850 16317 39384 45633 45633 1 SAPINSDSQGR Unmodified 1130.5316 0.53161428 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 6.25 3.96 1 1 1 1 29.797 29.797 2 0.00046145 6363 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.363 50.921 87.791 27.338 54.465 97.346 56.2 58.092 84 28 56 93 56 56 3 1 2 2 1 2 16066 16979 2334 16318 39385;39386;39387;39388 45634;45635;45636;45637 45636 4 SAPINSDSQGR Deamidation (N) 1131.5156 0.51562986 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 1 0 0 3 0 1 31.925 31.925 2 0.062682 8249 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.786 39.636 20.157 0 38.687 27.961 17.912 19.743 19 0 37 28 19 19 1 0 1 1 1 1 1745 16980 2334 16318 39389 45638 45638 1 SAPKEDDASASTSQSSR Unmodified 1722.7656 0.76564955 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 7.33 4.03 1 1 1 29.36 29.36 3 1.5471E-05 6708 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.639 75.316 79.042 0 60.442 30.604 66.324 87.958 74 0 56 28 65 83 2 0 1 1 2 2 10624 16981 2377 16319 39390;39391;39392 45639;45640;45641 45639 3 SAPLPNDSQAR Unmodified 1154.568 0.56799978 1244 O70172;F6RJE8 Pip4k2a Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha yes no 0 0 0 0 5 0 1 36.206 36.206 2 0.0024309 9323 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.102 41.326 0 0 40.034 0 58.576 0 0 0 37 0 56 0 0 0 1 0 1 0 4804.4 16982 1244 16320 39393 45642 45642 1 SAPPSLGEPTEAR Unmodified 1310.6466 0.64664404 545 F6QYT9;A2CG49;A0A0A0MQF1 Kalrn Kalirin yes no 0 0 0 0 4 0 1 43.83 43.83 2 0.0094025 13316 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.404 11.268 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1675 16983 545 16321 39394 45643 45643 1 SAPQIEGSK Unmodified 915.46616 0.46616048 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 5.5 0.5 1 1 41.085 41.085 2 0.0022134 11198 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.015 39.452 104.87 55.551 0 29.528 113.14 77.288 98 56 0 28 112 74 2 1 0 1 2 1 11088 16984 885 16322 39395;39396 45644;45645 45645 2 SAPSEGDEWDR Unmodified 1247.5055 0.50545911 1015 F7AVU1;Q8K2Y9 Ccm2 Cerebral cavernous malformations protein 2 homolog yes no 0 0 0 0 1.5 0.5 1 1 41.243 41.243 2 0.001854 11645 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.862 45.505 0 29.792 0 50.278 29.288 39.442 0 28 0 46 28 37 0 2 0 1 1 1 5207.3 16985 1015 16323 39397;39398 45646;45647 45646 2 SAPSIPK Unmodified 698.39629 0.39629 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 44.659 44.659 2;3 0.0053482 11384 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.692 23.26 2007.9 1643.7 2160.9 1509.8 2286.1 1646.1 1891 1706 2146 1535 2292 1593 5 5 4 4 4 3 277280 16986 1373 16324 39399;39400;39401;39402;39403 45648;45649;45650;45651;45652 45650 5 SAPYEFPEESPIEQLEER Unmodified 2148.9851 0.98514438 449 A2AE27;Q9DBT5 Ampd2 AMP deaminase 2 yes no 0 0 0 0 2.5 0.5 1 1 74.936 74.936 3 7.8074E-08 28193 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.75 93.965 19.119 8.849 25.341 0 29.288 14.924 18 9 24 0 28 14 2 1 2 0 1 1 8613.3 16987 449 16325 39404;39405 45653;45654 45654 2 SAQEEITEYR Unmodified 1224.5622 0.5622457 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 2 0.816 1 1 1 43.718 43.718 2 3.2391E-07 12417 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.76 98.695 248.23 127.27 62.082 166.35 82.722 98.072 232 130 65 157 83 92 2 2 1 2 1 1 59809 16988 1415 16326 39406;39407;39408 45655;45656;45657 45655 3 SAQEEITEYRR Unmodified 1380.6634 0.66335673 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 1 3 0 1 37.554 37.554 3 7.4237E-21 10921 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 177.83 118.63 123.63 84.142 68.986 0 0 84.214 116 88 69 0 0 79 1 1 1 0 0 1 13299 16989 1415 16327 39409 45658 45658 1 SAQHWLLDGFPR Unmodified 1425.7153 0.71533272 3338 Q9WUR9;A2ARF6;F6TEU8 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 8 0 1 65.049 65.049 3 0.0031056 21071 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.555 34.287 0 78.174 33.631 38.437 0 0 0 74 37 37 0 0 0 1 1 1 0 0 21222 16990 3338 16328 39410 45659 45659 1 SAQLGFK Unmodified 749.40719 0.40718903 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 50.859 50.859 2 0.012888 13537 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.88 24.417 746.98 630.47 1050.2 800.45 778.38 1249.5 703 637 1042 803 810 1193 3 3 4 4 3 4 178340 16991 1164 16329 39411;39412;39413;39414 45660;45661;45662;45663 45661 4 SAQPASAEPR Unmodified 1012.4938 0.49377221 1450 P26039;F6SX70 Tln1 Talin-1 yes no 0 0 0 0 3 0 1 26.042 26.042 2 0.00081231 5572 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.309 54.663 39.564 27.124 0 8.92 48.752 0 37 28 0 9 47 0 1 1 0 1 1 0 2102.9 16992 1450 16330 39415 45664 45664 1 SAQTASGPTEDQVEILEYNFNK Acetyl (Protein N-term) 2482.15 0.14997788 2643 Q8R1H0 Hopx Homeodomain-only protein yes yes 1 0 0 0 3.5 0.5 1 1 83.975 83.975 3 6.2504E-15 31094 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.763 40.757 9.6281 25.951 0 9.6757 27.772 31.188 9 25 0 9 28 30 1 2 0 1 2 2 8670.3 16993 2643 16331 39416;39417 45665;45666 45665 2 SASADLSR Unmodified 805.393 0.39299553 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 7.33 4.03 1 1 1 29.922 29.922 2 2.1255E-06 6917 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 164.53 14.285 196.63 244.81 156.46 94.044 116.11 272.9 185 245 158 93 111 256 2 3 2 1 1 2 28627 16994 1464;860 16332 39418;39419;39420 45667;45668;45669 45667 3 SASAHNLSSEK Unmodified 1129.5364 0.53636531 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 5.5 0.5 1 1 31.022 31.022 3 0.0010649 6446 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.262 49.885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16995 2499 16333 39421;39422 45670;45671 45671 2 SASAPASPR Unmodified 842.42463 0.42463001 636 B7ZNF6;E9QKH8;O35927 Ctnnd2 Catenin delta-2 yes no 0 0 0 0 4.5 0.5 1 1 25.961 25.961 2 8.6641E-05 4639 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.23 68.97 20.258 8.3281 14.573 0 14.644 24.518 19 9 14 0 14 23 2 1 1 0 1 1 3782.4 16996 636 16334 39423;39424 45672;45673 45673 2 SASGDTVFWGEHFEFNNLPAVR Unmodified 2479.1557 0.15567238 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 7 0 1 77.091 77.091 3 1.12E-06 27240 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.914 47.061 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2446.1 16997 992 16335 39425 45674 45674 1 SASPDDDLGSSNWEAADLGNEER Unmodified 2434.0157 0.015669242 796 D6RI64;Q9R0P4 1110004F10Rik;Smap Small acidic protein yes no 0 0 0 0 2 0 1 62.968 62.968 3 0.023014 22237 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 31.468 15.702 0 0 0 30.604 0 20.254 0 0 0 28 0 19 0 0 0 1 0 1 3662 16998 796 16336 39426 45675 45675 1 SASSDTSEELNSQDSPK Unmodified 1780.7599 0.75989547 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 0 0 0 2 0 1 42.244 42.244 3 7.9246E-05 12876 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.231 56.299 0 9.2416 20.004 0 0 0 0 9 19 0 0 0 0 1 1 0 0 0 1616.9 16999 1815 16337 39427 45676 45676 1 SASSGAEGDVSSEREP Unmodified 1563.6649 0.66487288 3159 Q9DD18 Dtd1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 0 1 13 0 1 33.759 33.759 3 2.6401E-05 8407 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.969 61.939 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 0 0 2760.2 17000 3159 16338 39428 45677 45677 1 SASSPKPDTK Unmodified 1016.5138 0.51383895 3227 Q9JKC6 Cend1 Cell cycle exit and neuronal differentiation protein 1 yes yes 0 0 0 1 6.5 0.5 1 1 33.43 33.43 3 0.001993 6767 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.489 52.563 454.93 246.82 334.83 599.39 195.05 468.8 427 256 337 570 210 445 2 1 1 2 1 2 64518 17001 3227 16339 39429;39430 45678;45679 45679 2 SASVDAEK Unmodified 805.38176 0.38176214 419 A2A432;E9PXY1 Cul4b Cullin-4B no no 0 0 0 0 4 0 1 36.014 36.014 2 0.01151 9656 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.143 39.792 0 29.024 45.913 47.542 0 29.848 0 28 46 46 0 28 0 1 1 1 0 1 2237.9 17002 419 16340 39431 45680 45680 1 SATAATVPPAAPAGEGGPPAPPPNLTSNR Acetyl (Protein N-term) 2707.3566 0.35655703 564 B0QZN5;P63044 Vamp2 Vesicle-associated membrane protein 2 yes no 1 0 0 0 3.5 0.5 1 1 62.665 62.665 3 5.4971E-32 22589 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.125 30.203 39.044 0 0 28 28.611 19.706 37 0 0 28 28 19 3 0 0 1 2 1 67817 17003 564 16341 39432;39433 45681;45682;45683;45684 45681 4 SATAATVPPAAPAGEGGPPAPPPNLTSNRR Acetyl (Protein N-term);Deamidation (N) 2864.4417 0.44168364 564 B0QZN5;P63044 Vamp2 Vesicle-associated membrane protein 2 yes no 1 1 0 1 3 0 1 56.452 56.452 3 9.8993E-34 19788 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.824 40.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6540.1 17004 564 16342 39434 45685 45685 165 1 SATDNAAR Unmodified 804.37259 0.37259444 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 5.5 4.39 1 1 1 1 18.142 18.142 2 0.0021074 2745 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 129.72 45.624 29.652 44.344 38.539 84.01 29.352 12.356 28 44 40 81 30 12 1 1 2 5 2 1 34601 17005 2614 16343 39435;39436;39437;39438 45686;45687;45688;45689;45690 45686 5 SATEESTSSSQK Unmodified 1240.5419 0.54190419 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 6.25 3.96 1 1 1 1 29.329 29.329 3 1.5708E-19 6609 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 151.98 122.04 29.758 138.32 66.846 133.6 239.37 191.45 28 130 65 130 241 186 1 1 2 3 3 3 40117 17006 1557 16344 39439;39440;39441;39442 45691;45692;45693;45694 45692 4 SATEQSGTGIR Unmodified 1105.5364 0.53636531 590 B1AU25;Q9Z0X1 Aifm1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 0 6.67 4.5 1 1 1 29.01 29.01 2 5.7607E-08 6943 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.32 99.616 20.207 29.507 47.225 70.03 19.564 87.92 19 28 47 65 19 83 1 1 2 2 1 3 7024.3 17007 590 16345 39443;39444;39445 45695;45696;45697 45695 3 SATGQHSPAR Unmodified 1010.4894 0.48935553 2700 Q8VDN4 Ccdc92 Coiled-coil domain-containing protein 92 yes yes 0 0 0 0 4.5 0.5 1 1 16.445 16.445 3 0.00048233 2351 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.821 46.274 8.5599 0 8.3802 5.2235 0 9.594 8 0 8 5 0 9 1 0 2 1 0 2 746.42 17008 2700 16346 39446;39447 45698;45699 45698 2 SATLLQLITK Unmodified 1086.6649 0.66486028 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 9.8 4.45 1 1 2 1 80.614 80.614 2;3 0.00010088 22053 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.015 64.584 247.87 156.09 160.89 100.56 134.33 156.71 232 158 158 92 130 148 3 3 3 2 2 3 103710 17009 815;2590 16347 39448;39449;39450;39451;39452 45700;45701;45702;45703;45704 45703 5 SATPATDGR Unmodified 874.41446 0.41445926 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 5 3.7 1 2 1 1 1 23.909 23.909 2 5.6085E-06 4563 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 156.01 90.127 363.81 54.184 163.41 120.15 271.06 413.71 340 56 157 116 278 395 6 1 3 3 7 6 51560 17010 1986 16348 39453;39454;39455;39456;39457;39458 45705;45706;45707;45708;45709;45710;45711 45707 7 SATPATDGSATPATDGSVTPATDGSITPATDGSVTPATDR Unmodified 3716.7137 0.71368015 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 2.33 0.471 2 1 57.849 57.849 4;5 8.3482E-09 19691 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.128 37.094 39.701 19.031 7.2583 90.566 52.361 29.379 37 18 9 84 55 28 2 1 1 3 4 2 30415 17011 1986 16349 39459;39460;39461 45712;45713;45714;45715 45713 4 SATTTPSGSPR Unmodified 1060.5149 0.51490158 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 5 0.816 1 1 1 26.087 26.087 2 1.6125E-08 4397 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.22 79.361 49.358 20.216 57.862 67.11 25.88 158.1 46 19 55 65 28 149 1 1 1 2 1 3 17150 17012 1983 16350 39462;39463;39464 45716;45717;45718 45718 3 SATTVPSGLGAGEQTQEGLTGK Unmodified 2088.0335 0.033491558 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 6 0 1 57.378 57.378 3 4.9676E-10 18853 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.676 51.79 20.387 0 0 0 19.197 19.706 19 0 0 0 19 19 1 0 0 0 1 1 3981.9 17013 1275 16351 39465 45719 45719 1 SATVELEK Unmodified 875.46001 0.46001246 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;A0A0A0MQH5 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 5 0 1 48.656 48.656 2 0.027894 15272 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.573 18.796 39.537 0 27.498 58.341 65.31 0 37 0 28 56 65 0 1 0 1 1 1 0 3714.4 17014 581 16352 39466 45720 45720 1 SATYVNTEGR Unmodified 1096.5149 0.51490158 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 34.12 34.12 2 1.4798E-37 8767 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 198.61 146.75 99.295 73.152 93.668 144.43 283.19 110.97 93 74 92 139 278 111 2 2 2 2 3 2 47308 17015 2736 16353 39467;39468;39469;39470;39471 45721;45722;45723;45724;45725 45722 5 SATYVNTEGR Deamidation (N) 1097.4989 0.49891717 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 1 0 0 3 0 1 35.379 35.379 2 0.032756 9902 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.882 47.335 0 29.165 37.481 18.036 26.435 58.942 0 28 37 19 28 56 0 1 1 1 1 1 2239.4 17016 2736 16353 39472 45726 45726 985 1 SAVAPPGAPK Unmodified 893.49707 0.49706667 2627 Q8R050 Gspt1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A yes yes 0 0 0 0 7 0 1 42.669 42.669 2 0.0001638 11101 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.802 58.373 29.807 0 39.884 0 57.607 28.204 28 0 37 0 56 28 1 0 1 0 1 1 3504 17017 2627 16354 39473 45727 45727 1 SAVATGPR Unmodified 757.40825 0.40825167 2987 Q9CXS4 Cenpv Centromere protein V yes yes 0 0 0 0 5.5 0.5 1 1 27.323 27.323 2 0.0066087 4819 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.09 63.556 69.56 36.703 0 50.278 45.781 137.27 65 37 0 46 46 130 2 1 0 1 1 2 9034 17018 2987 16355 39474;39475 45728;45729 45729 2 SAVDQAGGAQIVIDHLR Unmodified 1748.9169 0.91694566 937 E9Q912;Q3TU36 Rap1gds1 yes no 0 0 0 0 5 0 1 60.599 60.599 3 4.5076E-06 21042 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.637 55.33 0 0 67.382 66.181 45.076 0 0 0 65 65 46 0 0 0 1 1 1 0 5547 17019 937 16356 39476 45730 45730 1 SAVEDEGLK Unmodified 946.46074 0.46074075 1407 Q61696;P17879 Hspa1a;Hspa1b Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B yes no 0 0 0 0 4 0.816 1 1 1 45.632 45.632 3 0.0014758 14677 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.516 39.949 0 39.368 0 58.911 63.992 37.616 0 37 0 55 65 37 0 1 0 1 1 1 5712.1 17020 1407 16357 39477;39478;39479 45731;45732;45733 45731 3 SAVEEMEAEEAAAK Unmodified 1463.645 0.64498906 3257 Q9QUN9 Dkk3 Dickkopf-related protein 3 yes yes 0 0 0 0 1 0 1 59.328 59.328 3 0.032993 19300 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 37.013 22.451 0 19.743 28.277 18.724 19.014 0 0 19 28 19 19 0 0 1 1 1 1 0 839.61 17021 3257 16358 39480 45734 45734 1 SAVEYGTEEDVVK Unmodified 1424.6671 0.66710471 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 3 0 1 53.676 53.676 3 1.2965E-15 18351 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.57 89.463 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17022 3165 16359 39481 45735 45735 1 SAVGFDYQGK Unmodified 1070.5033 0.50327426 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 8.5 2.69 1 1 1 1 53.785 53.785 2;3 4.3416E-05 15638 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.31 81.956 68.682 151 173.78 88.278 122.19 97.024 65 149 166 84 120 93 1 3 2 2 2 1 35081 17023 2075 16360 39482;39483;39484;39485 45736;45737;45738;45739 45738 4 SAVGFEYQGK Unmodified 1084.5189 0.51892433 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 7 0.816 1 1 1 53.028 53.028 2;3 2.0823E-05 15945 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.76 93.044 147.88 152.82 159.02 220.84 132.65 292.56 139 148 157 213 139 278 2 2 2 3 2 3 20839 17024 2075 16361 39486;39487;39488 45740;45741;45742 45741 3 SAVGHEYQSK Unmodified 1104.52 0.51998696 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 5.5 0.5 1 1 32.321 32.321 3 9.4069E-06 7492 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.89 92.555 45.066 115.54 153.2 45.316 191.4 153.2 42 111 148 42 190 148 1 1 1 1 2 1 18314 17025 2075 16362 39489;39490 45743;45744 45743 2 SAVGSAQLLMSQK Unmodified 1318.6915 0.69148574 1897 Q0VF59;Q8BJ42 Dlgap2 Disks large-associated protein 2 yes no 0 0 0 0 9 0 1 61.657 61.657 3 0.039628 18677 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.013 12.631 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 3817.5 17026 1897 16363 39491 45745 45745 1 SAVGSTQLLLSQK Unmodified 1330.7456 0.7456298 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 0 11 2 1 1 62.012 62.012 3 0.00086907 18798 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.891 27.477 48.568 54.867 86.269 0 77.404 0 46 56 83 0 74 0 1 1 1 0 1 0 6490.8 17027 582 16364 39492;39493 45746;45747 45746 2 SAVPFLPVNPEYSATR Unmodified 1746.8941 0.89408495 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 8 0 1 72.796 72.796 3 0.0095428 24648 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.202 18.064 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 8348.4 17028 2046 16365 39494 45748 45748 1 SAVPPGADK Unmodified 840.43413 0.43413207 1785 P63325;A0A338P7K4 Rps10 40S ribosomal protein S10 yes no 0 0 0 0 5 0 1 39.219 39.219 2 0.035681 10798 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.981 23.685 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1974.4 17029 1785 16366 39495 45749 45749 1 SAVSASSK Unmodified 735.37628 0.37628284 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 32.019 32.019 2 0.0001965 7502 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.05 44.202 203.24 260.27 65.4 351.89 202.54 175.44 191 255 65 329 207 170 4 2 2 4 2 3 42192 17030 2919 16367 39496;39497;39498;39499;39500 45750;45751;45752;45753;45754 45754 5 SAWSSTLTVSR Unmodified 1193.6041 0.60405094 784 D3Z709;Q9D415 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 9 0 1 54.334 54.334 2 0.00026737 15181 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.438 58.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17031 784 16368 39501 45755 45755 1 SAYALCTFALSTGDPSQPVLLFR Unmodified 2513.2624 0.26244564 3089 Q9D892 Itpa Inosine triphosphate pyrophosphatase yes yes 0 0 0 0 11 1.41 1 1 1 1 1 91.891 91.891 3;4 1.665E-06 29866 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.744 43.081 19.158 82.194 14.212 19.92 43.702 24.518 18 79 14 19 42 23 2 3 1 1 2 1 16234 17032 3089 16369 39502;39503;39504;39505;39506 45756;45757;45758;45759;45760 45757 5 SAYEEQR Unmodified 881.38791 0.38791015 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 2 0 1 25.81 25.81 2 0.027671 5253 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 97.093 66.908 88.485 62.466 43.507 46.49 63.537 67.477 83 65 46 46 65 65 1 1 1 1 1 1 7764.2 17033 1438 16370 39507 45761 45761 1 SAYSGLQSSSYLMSAR Unmodified 1706.7934 0.79338463 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 7.75 4.32 1 1 1 1 60.1 60.1 2;3 1.0732E-12 18760 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.766 74.666 98.33 178.54 188.8 171.34 0 259.04 93 177 186 166 0 243 1 3 2 2 0 3 17578 17034 1329 16371 39508;39509;39510;39511 45762;45763;45764;45765 45763 4 SAYSQIR Unmodified 823.41882 0.41881635 3122 Q9DBF1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 0 7 0 1 34.328 34.328 2 0.02478 7218 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.41 36.654 59.63 0 76.892 64.554 101.45 66.395 56 0 74 65 102 65 1 0 1 1 1 1 6529.6 17035 3122 16372 39512 45766 45766 1 SAYSSYSAPVSSSLSVR Unmodified 1746.8424 0.84244331 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 8.86 2.47 1 2 1 1 1 1 55.761 55.761 2;3 5.6702E-52 18952 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 187.45 152.27 227.08 91.434 262.79 111.29 277.91 318.27 213 93 251 111 278 306 3 2 4 3 3 4 55224 17036 1329 16373 39513;39514;39515;39516;39517;39518;39519 45767;45768;45769;45770;45771;45772;45773 45773 7 SCAEFVSGSQLR Unmodified 1339.619 0.61904908 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 49.116 49.116 2 1.8455E-20 14992 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.05 115.86 217.12 100.99 211.79 64.409 81.251 106.41 204 112 205 65 84 102 3 3 3 1 2 2 24178 17037 3156 16374 39520;39521;39522;39523 45774;45775;45776;45777 45775 4 SCAHDWVYE Unmodified 1165.4499 0.44985848 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 0 3 0 1 49.967 49.967 2 0.063198 16640 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.166 47.964 29.805 0 40.147 18.374 0 0 28 0 38 19 0 0 1 0 1 1 0 0 9430.8 17038 866 16375 39524 45778 45778 1 SCALSNVK Unmodified 877.43275 0.43275186 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 8 0 1 43.615 43.615 2 0.0068598 10905 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.069 40.942 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17039 2633 16376 39525 45779 45779 1 SCAQNWIYE Unmodified 1169.4812 0.48115861 1385 P15532 Nme1 Nucleoside diphosphate kinase A yes yes 0 0 0 0 8 3.56 1 1 1 65.53 65.53 2 0.016001 23326 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.625 48.296 29.754 115.72 154.59 75.934 121.85 106.59 28 112 148 74 120 102 1 2 2 2 2 2 64734 17040 1385 16377 39526;39527;39528 45780;45781;45782 45780 3 SCCDLAAAGQLGK Acetyl (Protein N-term) 1391.6173 0.61733452 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 1 0 0 0 4 0 1 62.044 62.044 2 1.6398E-11 21926 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.683 35.068 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17041 3355 16378 39529 45783 45783 1 SCCDYSLHVDITEWHK Unmodified 2048.872 0.87204565 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 6.5 1.12 1 1 1 1 62.56 62.56 4 1.0912E-05 21215 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.01 87.177 285.67 448.3 354.24 402.85 459.37 372.78 269 445 361 388 463 362 3 5 4 4 4 5 82237 17042 1158 16379 39530;39531;39532;39533 45784;45785;45786;45787;45788 45786 5 SCCSCCPAGCEK Unmodified 1474.4768 0.47675999 1471 P28184 Mt3 Metallothionein-3 yes yes 0 0 0 0 7 3.54 1 1 1 1 34.024 34.024 3 2.2115E-06 8293 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.43 98.539 166.69 236.89 293.59 225.3 420.35 245.79 157 231 287 223 418 240 3 4 3 4 4 3 31911 17043 1471 16380 39534;39535;39536;39537 45789;45790;45791;45792;45793 45790 5 SCCSCCPVGCSK Unmodified 1460.4975 0.49749543 1301 P02802 Mt1 Metallothionein-1 yes yes 0 0 0 0 6 0 1 37.276 37.276 3 0.00023473 9372 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.412 65.133 20.387 0 0 40.441 0 0 19 0 0 37 0 0 1 0 0 1 0 0 3734.6 + 17044 1301 16381 39538 45794 45794 1 SCEAGYSPSYKEDK Unmodified 1619.6774 0.67735182 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 0 0 1 5 0 1 43.272 43.272 3 6.027E-07 12684 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.92 90.26 59.428 64.209 56.44 0 46.111 58.38 56 65 56 0 46 56 1 1 1 0 1 1 4455.4 17045 1344 16382 39539 45795 45795 1 SCENLAPFSTALQLLK Unmodified 1790.9237 0.92367052 2625 Q8R3V2;Q8R010 Aimp2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 yes no 0 0 0 0 9.5 0.5 1 1 90.71 90.71 3 0.00012351 32191 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.605 46.942 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 3750.4 17046 2625 16383 39540;39541 45796;45797 45796 2 SCFLCMVCK Unmodified 1203.4909 0.49087714 1842 P97315 Csrp1 Cysteine and glycine-rich protein 1 yes yes 0 0 0 0 11.3 1.25 1 1 1 68.499 68.499 2;3 0.00093803 19823 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.676 59.557 0 48.203 44.326 57.337 158.36 0 0 46 46 56 158 0 0 1 1 1 2 0 16755 17047 1842 16384 39542;39543;39544 45798;45799;45800 45798 3 SCFQPLFR Unmodified 1053.5066 0.5065855 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BQM5;A0A2I3BPW0;A0A2I3BPL1;A0A2I3BS20 Ndrg2 Protein NDRG2 no no 0 0 0 0 10 1.87 1 1 1 1 61.104 61.104 2 0.0041754 18404 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.41 89.221 396.48 427.24 252.91 474.55 481.81 433.74 371 425 259 454 482 417 4 5 3 5 4 4 168700 17048 3277;377 16385 39545;39546;39547;39548 45801;45802;45803;45804;45805;45806 45802 6 SCGQVVEEWK Unmodified 1220.5496 0.54957253 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 0 5.5 0.5 1 1 55.205 55.205 3 0.00024876 18546 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.701 62.904 138.47 185.33 130.1 130.99 193.85 192.74 130 185 131 129 194 186 2 3 2 2 2 2 16244 17049 1376 16386 39549;39550 45807;45808;45809 45807 3 SCHTGLGR Unmodified 886.40793 0.40793409 2797 Q921I1;E9Q035;D3YYR8;CON__Q29443;CON__Q0IIK2 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 6 0 1 21.452 21.452 3 0.027293 3076 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.607 0 48.903 55.8 29.105 43.205 51.361 0 46 56 32 42 51 0 1 1 1 1 1 0 2775.6 17050 2797 16387 39551 45810 45810 1 SCHTGVDR Unmodified 930.39776 0.39776333 2797 Q921I1;E9Q035;F7BAE9;F7CJN9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 0 4 0.816 1 1 1 17.134 17.134 3 0.0031215 2409 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.75 47.257 25.703 13.021 14.104 4.9314 38.08 24.497 24 13 14 5 37 24 2 2 2 1 2 3 8046.7 17051 2797 16388 39552;39553;39554 45811;45812;45813 45812 3 SCLLHQFIEK Unmodified 1273.6489 0.64889264 1633 P56371 Rab4a Ras-related protein Rab-4A yes yes 0 0 0 0 9 0 1 61.806 61.806 3 0.0063993 18765 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.359 28.617 59.808 55.551 0 100.68 51.622 67.817 56 56 0 93 56 65 1 1 0 1 1 1 4596.6 17052 1633 16389 39555 45814 45814 1 SCLLHQFIENK Unmodified 1387.6918 0.69182009 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B no no 0 0 0 0 10 0 1 62.483 62.483 3 0.019551 17093 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.564 20.577 87.773 110.13 122.79 0 0 148.17 83 111 120 0 0 139 1 1 1 0 0 1 3711.1 17053 2785 16390 39556 45815 45815 1 SCLLHQFTEK Unmodified 1261.6125 0.61250714 2729 Q91V41 Rab14 Ras-related protein Rab-14 yes yes 0 0 0 0 9 0.816 1 1 1 55.627 55.627 3 0.011145 16519 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.436 24.763 286.42 226.47 0 287.3 357.03 214.84 268 231 0 269 361 206 2 2 0 2 2 1 33065 17054 2729 16391 39557;39558;39559 45816;45817;45818 45816 3 SCLLLQFTDK Unmodified 1223.622 0.62200919 1617 P53994;Q3TEG7;P59279;G3UXQ7;G3V022 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 0 10 0.816 1 1 1 75.204 75.204 2;3 3.591E-05 22757 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.36 66.749 0 86.449 111.47 77.421 112.55 0 0 83 111 74 111 0 0 2 2 1 2 0 11051 17055 1617 16392 39560;39561;39562 45819;45820;45821 45820 3 SCLLLQFTDKR Unmodified 1379.7231 0.72312022 1617 P53994;Q3TEG7;P59279;G3UXQ7;G3V022 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 1 11 0.816 1 1 1 65.752 65.752 3 1.0405E-08 18577 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.36 103.39 199.56 944.57 1310.8 442.66 727.37 675.34 188 921 1283 449 737 653 1 3 3 2 2 2 104570 17056 1617 16393 39563;39564;39565 45822;45823;45824 45822 3 SCLNVFSNLAK Unmodified 1251.6282 0.6281572 2475 Q8BX70 Vps13c Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 0 10 0 1 70.562 70.562 3 0.019461 20810 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.616 8.6564 0 48.203 44.3 57.921 34.391 48.055 0 46 46 56 37 46 0 1 1 1 1 1 3273.5 17057 2475 16394 39566 45825 45825 1 SCLYGAGLLPGSLPFGPLLAAPGSAR Unmodified 2541.3414 0.34136466 3217 Q9JJA9 Grasp General receptor for phosphoinositides 1-associated scaffold protein yes yes 0 0 0 0 12 0 1 97.206 97.206 3 7.7611E-05 27778 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.956 34.299 0 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 1030.4 17058 3217 16395 39567 45826 45826 1 SCNCLLLK Unmodified 1006.494 0.49397191 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 9.33 1.89 1 1 2 1 1 56.384 56.384 2;3 0.0012219 16921 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.9 71.105 1247.4 1060.6 1056.1 1162.1 1368.9 1373.1 1172 1075 1072 1132 1385 1323 6 6 6 7 6 6 415400 17059 1398 16396 39568;39569;39570;39571;39572;39573 45827;45828;45829;45830;45831;45832;45833;45834 45828 8 SCNPVVFSFYNYLR Unmodified 1764.8294 0.8293762 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10.5 0.5 1 1 84.459 84.459 2 0.029461 26511 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.288 40.904 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 5954.5 17060 570 16397 39574;39575 45835;45836 45836 2 SCSGVEFSTSGSSNTDTGK Unmodified 1906.7851 0.78506437 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5;D3YUN8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 7.33 4.03 1 1 1 47.465 47.465 3 3.8996E-49 14798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 137.52 126.26 59.742 0 58.229 46.29 27.532 0 56 0 56 46 28 0 2 0 2 2 1 0 16959 17061 2096 16398 39576;39577;39578 45837;45838;45839 45839 3 SCSPPPPPPEPTSEGR Unmodified 1690.7621 0.7620845 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 2.5 0.5 1 1 39.607 39.607 3 0.00068465 11954 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.395 40.834 78.409 141.83 46.666 82.095 105.91 0 74 139 46 84 102 0 2 2 1 2 2 0 9455.6 17062 1019 16399 39579;39580 45840;45841;45842 45842 3 SCSSPVFSR Unmodified 1025.46 0.46002924 3371 Q9Z140;Q3UYN2;E9QA77 Cpne6 Copine-6 yes no 0 0 0 0 7 0.816 1 1 1 39.834 39.834 2 3.2683E-06 9815 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 158.37 109.04 48.652 122.28 126.64 80.671 134.37 91.377 46 120 125 79 135 88 1 3 2 2 3 2 28157 17063 3371 16400 39581;39582;39583 45843;45844;45845 45844 3 SCVLFNCAALASQIAAEQNLDNDEGLK Unmodified 2950.3801 0.38007094 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 7 0 1 86.585 86.585 4 0.0018534 31729 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.927 28.028 20.387 0 0 0 8.3971 29.608 19 0 0 0 9 28 1 0 0 0 1 1 1996.7 17064 3327 16401 39584 45846 45846 1 SCYEDGWLIK Unmodified 1269.57 0.56997362 2757 Q91WK5 Gcsh Glycine cleavage system H protein, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 68.738 68.738 3 0.0012402 24117 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.067 38.179 0 29.792 47.714 86.636 65.868 0 0 28 46 83 65 0 0 1 1 2 1 0 6918.5 17065 2757 16402 39585;39586 45847;45848 45848 2 SDAAPAASDSK Unmodified 1018.4567 0.456718 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 4 0 2 33.82 33.82 2;3 6.2406E-08 8620 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.28 79.13 64.147 46.283 0 0 23.385 79.283 60 46 0 0 23 75 2 1 0 0 1 2 7241.9 17066 2769 16403 39587;39588 45849;45850 45849 2 SDAAPAASDSKPSSAEPAPSSK Unmodified 2056.9549 0.95490689 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 1 5.29 3.33 3 1 1 1 1 40.486 40.486 3;4;5 1.0716E-21 12309 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.41 95.361 992.17 1340.7 1362.7 735.96 1627.7 1853.1 938 1342 1357 737 1625 1775 7 7 5 5 6 8 385140 17067 2769 16404 39589;39590;39591;39592;39593;39594;39595 45851;45852;45853;45854;45855;45856;45857;45858;45859 45851 9 SDAAVDTSSEITTK Acetyl (Protein N-term) 1465.6784 0.67839767 1456 P26350;A0A087WP98;A0A087WPN6;A0A087WQN2 Ptma Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha yes no 1 0 0 0 4.75 4.82 1 1 1 1 55.696 55.696 2 2.3152E-111 19320 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.84 92.526 127.81 160.54 142.39 213.27 82.117 185.27 120 159 149 204 84 176 4 4 5 4 2 5 143610 17068 1456 16405 39596;39597;39598;39599 45860;45861;45862;45863;45864;45865;45866 45865 7 SDAEAEIDMENSK Unmodified 1437.593 0.59295349 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 2 0 1 51.894 51.894 3 0.015311 17056 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.115 21.511 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17069 287 16406 39600 45867 45867 1 SDAEDGEGTVASWELR Unmodified 1720.754 0.75402223 2128 Q61466;A0A2R8VI06 Smarcd1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 0 3 0 1 60.474 60.474 3 0.055272 21519 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 31.111 10.73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17070 2128 16407 39601 45868 45868 1 SDALETLGFLNHYQMK Unmodified 1865.8982 0.89818405 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 9 0 1 76.174 76.174 3 0.00029484 25492 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.861 43.283 0 38.575 47.458 0 26.935 68.521 0 37 46 0 28 65 0 1 1 0 1 1 6163.3 17071 1110 16408 39602 45869 45869 1 SDANTDLIGGSPK Unmodified 1273.615 0.61500956 1616 P53986 Slc16a1 Monocarboxylate transporter 1 yes yes 0 0 0 0 5 0 1 51.398 51.398 3 0.049237 16633 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 34.82 9.9667 0 0 38.812 27.44 45.216 47.746 0 0 37 28 46 46 0 0 1 1 1 1 3812.3 17072 1616 16409 39603 45870 45870 1 SDAPTGDVLLDEALK Unmodified 1542.7777 0.77771779 2961 Q9CRA5;Q05BZ0 Golph3 Golgi phosphoprotein 3 yes no 0 0 0 0 3 0 1 74.265 74.265 3 0.0006528 27846 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.55 39.71 0 20.216 0 0 19.197 19.706 0 19 0 0 19 19 0 1 0 0 1 1 1382.3 17073 2961 16410 39604 45871 45871 1 SDASTPPSPK Unmodified 985.47164 0.47163978 1523 P35564 Canx Calnexin yes yes 0 0 0 0 4.5 0.5 1 1 36.996 36.996 2;3 0.0024494 9635 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.862 49.101 99.589 16.815 19.399 0 29.288 29.848 93 18 19 0 28 28 2 1 1 0 1 1 5783.1 17074 1523 16411 39605;39606 45872;45873 45873 2 SDASYPPITDWFWFK Unmodified 1858.8566 0.85663681 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 10 2.16 1 1 1 98.641 98.641 3 3.7486E-05 35302 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.264 69.398 49.047 67.981 30.296 13.116 14.644 102.34 46 67 28 12 14 96 3 4 1 1 1 3 8064.9 17075 1147 16412 39607;39608;39609 45874;45875;45876;45877;45878;45879 45874 6 SDATADDLIDVVEGNR Unmodified 1688.7853 0.78532236 1503 P32233 Drg1 Developmentally-regulated GTP-binding protein 1 yes yes 0 0 0 0 2.5 0.5 1 1 74.798 74.798 3 0.00045664 28086 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.814 38.708 0 0 9.738 0 19 9.594 0 0 9 0 19 9 0 0 1 0 1 1 2243.9 17076 1503 16413 39610;39611 45880;45881 45881 2 SDAVPSEVR Unmodified 958.47197 0.47197413 373 Q6PDS5;A0A2I3BPC1;Q01065;A0A2I3BR90 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 2 0 1 38.054 38.054 2 0.0049686 10935 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.064 37.997 0 0 19.246 29.457 0 0 0 0 19 28 0 0 0 0 1 1 0 0 3269.5 17077 373 16414 39612 45882 45882 1 SDDALFAL Unmodified 850.40725 0.40724861 2058 Q5SRX1;Q5SXA5;Q5SXA4;F6RBX1;F6ZDJ1 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 6.67 4.5 1 1 1 84.585 84.585 2 0.017962 32960 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.454 79.454 0 0 44.362 0 0 71.706 0 0 41 0 0 69 0 0 2 0 0 3 14520 17078 2058 16415 39613;39614;39615 45883;45884;45885 45885 3 SDDGVAVICR Unmodified 1090.5077 0.50770771 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 4 0 1 45.142 45.142 2 1.1516E-08 13974 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 150.36 104.39 128.3 90.3 0 0 0 0 120 93 0 0 0 0 1 1 0 0 0 0 17697 17079 1072 16416 39616 45886 45886 1 SDDIASADR Unmodified 948.41485 0.41485319 1986 Q3UHL1;A0A0A6YW88 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 5.33 5.44 1 1 1 32.816 32.816 2 2.0964E-93 8470 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 204.62 130.96 1046.5 859.88 1216.6 753.14 965.43 1260.2 986 892 1206 768 996 1208 3 3 3 3 2 3 345100 17080 1986 16417 39617;39618;39619 45887;45888;45889;45890;45891 45890 5 SDDNRESLEK Unmodified 1191.5368 0.53675924 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 1 6 4.97 1 1 1 33.899 33.899 3 0.0062903 9158 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.267 33.743 118.76 166.82 170.86 104.09 30.613 201.67 112 167 172 102 32 190 2 3 3 2 1 3 20053 17081 3130 16418 39620;39621;39622 45892;45893;45894 45893 3 SDDNSYDEK Unmodified 1071.3993 0.3992627 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 2 0 1 36.536 36.536 3 0.0021541 10151 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.162 46.42 59.538 44.008 55.124 56.73 63.396 57.887 56 46 56 56 65 56 1 1 1 1 1 1 9628.7 17082 1460 16419 39623 45895 45895 1 SDDPDQQYLILNTAR Unmodified 1747.8377 0.83769228 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 5.8 3.66 1 2 1 1 62.597 62.597 2;3 0.00035491 22200 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.295 68.691 143.78 47.585 140.16 15.052 61.435 48.916 135 46 130 14 61 47 3 1 1 1 3 2 31299 17083 3174 16420 39624;39625;39626;39627;39628 45896;45897;45898;45899;45900 45898 5 SDDPVDVQVNGNLIQESDNLEAEDNR Deamidation (N) 2885.2799 0.27988243 2084 Q60738 Slc30a1 Zinc transporter 1 yes yes 0 1 0 0 1 0 1 72.577 72.577 3 0.0024582 24764 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.087 37.355 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1669.1 17084 2084 16421 39629 45901 45901 808 1 SDDSVIQLLNPNR Unmodified 1469.7474 0.74742071 856 Q8R5M8;E9PYN1;E0CY16 Cadm1 Cell adhesion molecule 1 yes no 0 0 0 0 8.67 3.09 1 1 1 72.045 72.045 2;3 7.6439E-05 26868 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.492 57.294 118.69 0 69.883 19.891 103.5 105.78 111 0 65 19 102 102 3 0 2 1 2 3 16529 17085 856 16422 39630;39631;39632 45902;45903;45904 45904 3 SDEEYRELFDLALR Unmodified 1754.8475 0.84752869 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 1 4.5 0.5 1 1 78.456 78.456 3 0.0047481 29288 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.939 29.741 20.387 0 0 0 39.457 8.4681 19 0 0 0 38 9 1 0 0 0 1 1 5342.5 17086 2057 16423 39633;39634 45905;45906 45905 2 SDEGHPFR Unmodified 943.41479 0.41479361 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 4 0 1 27.557 27.557 3 0.012108 5715 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.436 29.147 48.803 55.521 46.195 0 0 0 46 56 46 0 0 0 1 1 1 0 0 0 12208 17087 2886 16424 39635 45907 45907 1 SDEGIYR Unmodified 838.3821 0.38209649 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 2 0 1 35.243 35.243 2 0.027262 9574 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.677 51.824 0 0 0 49.466 43.177 77.652 0 0 0 46 46 74 0 0 0 1 1 1 4346.9 17088 1180 16425 39636 45908 45908 1 SDEHVDIR Unmodified 969.45157 0.45157304 546 Q8C318;A2RSJ4 Uhrf1bp1l UHRF1-binding protein 1-like yes no 0 0 0 0 1 0 1 30.52 30.52 3 0.0083688 7063 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.621 26.62 60.088 0 0 20.767 0 0 56 0 0 19 0 0 1 0 0 1 0 0 2293.4 17089 546 16426 39637 45909 45909 1 SDEISFADFR Unmodified 1185.5302 0.53021729 274 A0A1D5RLG3;Q80UJ7 Rab3gap1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 0 4 0 1 66.595 66.595 2 0.033925 23837 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.013 23.659 30.044 0 0 0 58.576 0 28 0 0 0 56 0 1 0 0 0 1 0 3400.4 17090 274 16427 39638 45910 45910 1 SDESDQQESLHK Unmodified 1401.6008 0.60081606 773 Q99LD9;D3Z487;D3Z7J6 Eif2b2 Translation initiation factor eIF-2B subunit beta yes no 0 0 0 0 2.5 0.5 1 1 34.821 34.821 3 0.00016052 9398 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.69 60.584 80.175 25.935 28.487 61.208 28.62 19.437 75 28 28 56 28 19 2 1 1 1 1 1 2850.3 17091 773 16428 39639;39640 45911;45912 45911 2 SDESLPDGLSPK Unmodified 1243.5932 0.59321148 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 5 0 1 56.891 56.891 3 0.0028719 19271 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.448 28.656 0 29.792 0 20.234 28.359 0 0 28 0 19 28 0 0 1 0 1 1 0 1605.4 17092 2363 16429 39641 45913 45913 1 SDFDMVDYLNELR Unmodified 1615.7188 0.7188227 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 5 0 1 87.233 87.233 3 0.00074592 33325 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.224 43.561 0 20.073 8.5336 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 1215.9 17093 1798 16430 39642 45914 45914 1 SDFDPGQDTYQHPPK Unmodified 1730.7536 0.7536283 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 47.717 47.717 3;4 2.7692E-05 15274 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.566 81.649 375.46 192.68 610.8 730.35 667.41 492.7 352 195 593 713 676 472 4 2 6 8 7 6 117150 17094 2843 16431 39643;39644;39645;39646;39647 45915;45916;45917;45918;45919;45920;45921;45922 45918 8 SDFDSNPFADPDLNNPFKDPSVTQVTR Acetyl (Protein N-term) 3064.405 0.40502337 2575 Q8K021 Scamp1 Secretory carrier-associated membrane protein 1 yes yes 1 0 0 1 13 0 1 85.797 85.797 3 5.8548E-08 33671 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.957 38.192 0 0 0 20.767 0 49.036 0 0 0 19 0 46 0 0 0 1 0 1 7125.9 17095 2575 16432 39648 45923 45923 1 SDFEENGSMDNVCLFLNLANDPTIER Deamidation (N) 3000.3117 0.31171661 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 1 0 0 13 0 1 95.109 95.109 3 6.1118E-10 38091 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.738 57.738 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17096 1741 16433 39649 45924 45924 678 1 SDGALVDCGTSAQK Unmodified 1407.63 0.63000769 2766 Q91XH5;G3UXX3;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 4 0 1 45.998 45.998 3 1.6245E-14 14369 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.464 68.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17097 2766 16434 39650 45925 45925 1 SDGIYIINLK Unmodified 1134.6285 0.62847478 1374 P14206;A0A1L1SUK3 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 8 0.816 1 1 1 73.308 73.308 2;3 4.2961E-06 24183 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.84 77.497 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17098 1374 16435 39651;39652;39653 45926;45927;45928 45928 3 SDGSLDDGDGIHR Unmodified 1342.5749 0.57493566 3294 Q9QZI8 Serinc1 Serine incorporator 1 yes yes 0 0 0 0 2 0 1 35.013 35.013 3 1.7988E-07 9453 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.29 81.487 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 3802.6 17099 3294 16436 39654 45929 45929 1 SDGTETSTNLHQK Unmodified 1416.6481 0.6481006 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 4 0 1 32.276 32.276 3 1.3508E-14 7892 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 132.79 81.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2649.3 17100 3259 16437 39655 45930 45930 1 SDIDEIVLVGGSTR Unmodified 1459.7518 0.75183739 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 4.33 0.471 2 1 68.724 68.724 2;3 7.4698E-05 24708 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.933 43.607 29.704 47.726 36.886 27.308 58.368 0 28 47 38 28 57 0 1 1 2 2 2 0 4858.4 17101 1419 16438 39656;39657;39658 45931;45932;45933 45932 3 SDILLELLCVSEK Acetyl (Protein N-term) 1559.8117 0.81166045 1587 P49442;E0CYQ4;E0CX64;H3BK26 Inpp1 Inositol polyphosphate 1-phosphatase yes no 1 0 0 0 8.67 3.09 1 1 1 119.13 119.13 2 1.399E-49 38406 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.83 52.282 13.881 9.8711 2.9844 12.863 3.9757 10.547 13 10 3 12 4 10 3 2 1 2 1 3 3081.1 17102 1587 16439 39659;39660;39661 45934;45935;45936 45935 3 SDILPLDVIGR Acetyl (Protein N-term) 1238.6871 0.68705229 2558 Q8CIV8;E0CXJ6;E0CZ81 Tbce Tubulin-specific chaperone E yes no 1 0 0 0 4 0 1 91.804 91.804 2 0.0031541 33977 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.187 30.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 532.5 17103 2558 16440 39662 45937 45937 1 SDISERPSVDDVESETGSTGALETR Unmodified 2636.2049 0.20492658 2331 Q8CAA2;Q80X80;A0A1L1SSP2 C2cd2l C2 domain-containing protein 2-like yes no 0 0 0 1 2 0 1 53.348 53.348 3 0.0076466 17659 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 37.209 28.819 0 0 20.18 8.4774 8.3372 20.016 0 0 19 9 9 19 0 0 1 1 1 1 1601.5 17104 2331 16441 39663 45938 45938 1 SDISPLTPR Unmodified 984.52401 0.52400971 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6 0.816 1 1 1 48.353 48.353 2 0.00087344 14530 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.84 40.357 495.34 396.19 337.94 512.95 480.51 486.75 465 408 337 496 494 468 4 4 3 4 4 4 34538 17105 1382 16442 39664;39665;39666 45939;45940;45941;45942;45943 45941 5 SDIYVCMISYAHNVAAQGK Unmodified 2125.9925 0.99249514 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 11 0 2 77.06 77.06 3;4 7.4509E-08 23191 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.814 17.153 60.088 59.584 0 60.158 55.813 49.036 56 56 0 56 56 46 1 1 0 1 1 1 10878 17106 1595 16443 39667;39668 45944;45945 45945 2 SDKDLETQVIQLNEQVHSLK Unmodified 2323.202 0.20195387 722 D3YYK8;E9Q6X0;Q8R001 Mapre2 Microtubule-associated protein RP/EB family member 2 yes no 0 0 0 1 6.67 0.471 1 2 69.936 69.936 4;5 1.4263E-06 23904 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.89 39.237 177.09 80.879 285.24 220.23 287.84 65.35 167 84 278 222 287 65 3 2 3 3 3 1 24220 17107 722 16444 39669;39670;39671 45946;45947;45948 45948 3 SDLDSSSSSAYPK Acetyl (Protein N-term) 1384.5994 0.59941907 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 1 0 0 0 6.33 4.78 1 1 1 51.72 51.72 2 5.5456E-21 17026 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.887 54.572 0 50.008 100.63 29.725 190.95 65.175 0 47 93 28 186 65 0 2 1 1 3 2 39734 17108 2507 16445 39672;39673;39674 45949;45950;45951 45951 3 SDLGNLLK Unmodified 858.48108 0.48108226 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 8 0 1 64.193 64.193 2 0.035339 20590 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.598 17.195 87.89 91.03 119.38 102.36 106.75 135.53 83 93 120 102 111 130 1 1 1 1 1 1 6404.9 17109 2543 16446 39675 45952 45952 1 SDLLAAIR Unmodified 857.49707 0.49706667 2716 Q8VHI6 Wasf3 Wiskott-Aldrich syndrome protein family member 3 yes yes 0 0 0 0 8 0 1 64.035 64.035 2 0.01359 20512 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.953 36.322 99.135 0 109.86 0 83.495 96.755 93 0 102 0 83 93 1 0 1 0 1 1 8387.2 17110 2716 16447 39676 45953 45953 1 SDLLLEGFNNYR Unmodified 1439.7045 0.70449327 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 7 0.816 1 1 1 74.605 74.605 2;3 0.0010841 26967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.067 24.427 20.387 9.2416 20.004 51.371 0 20.254 19 9 19 47 0 19 1 1 1 2 0 1 8931.2 17111 1974 16448 39677;39678;39679 45954;45955;45956 45954 3 SDLLLSGR Unmodified 859.47633 0.47633123 156 A0A0R4J049;Q8CIG8 Prmt5 Protein arginine N-methyltransferase 5 yes no 0 0 0 0 7 0 1 53.868 53.868 2 0.051866 16300 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.88 20.651 0 67.126 121.67 93.085 69.792 97.146 0 65 120 93 74 93 0 1 1 1 1 1 5188.2 17112 156 16449 39680 45957 45957 1 SDLYIGGVAK Unmodified 1021.5444 0.5444108 2968 Q9CS84;E0CY11;A0A0G2JES8;H3BK41 Nrxn1 Neurexin-1 yes no 0 0 0 0 7 0 1 59.559 59.559 2 3.1884E-05 19069 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.71 62.647 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17113 2968 16450 39681 45958 45958 1 SDNGELEDKPPAPPVR Acetyl (Protein N-term);Deamidation (N) 1762.8374 0.83735793 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 1 1 0 1 1 0 1 52.545 52.545 3 0.000239 16225 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.196 42.216 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 3666.7 17114 2556 16451 39682 45959 45959 943 1 SDNILLGMDGSVK Deamidation (N) 1348.6544 0.65443153 1099;2106 G5E884;O88643;Q61036 Pak1;Pak3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 1 0 0 6 0 1 70.091 70.091 2 0.0061332 24821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.515 28.164 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17115 1099;2106 16452 39683 45960 45960 292 1 SDNILLGMDGSVK Unmodified 1347.6704 0.67041595 1099;2106 G5E884;O88643;Q61036 Pak1;Pak3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 0 0 0 6.5 0.5 1 1 70.198 70.198 3 0.00010777 24863 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.175 27.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17116 1099;2106 16452 39684;39685 45961;45962 45961 2 SDNKDDDIDIDAI Unmodified 1447.6314 0.63144748 1661 P59325;Q8BVV6 Eif5 Eukaryotic translation initiation factor 5 yes no 0 0 0 1 2.5 0.5 1 1 65.245 65.245 3 0.022251 23601 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 48.14 25.607 79.169 46.283 0 0 46.148 57.313 74 46 0 0 46 55 2 1 0 0 1 1 14484 17117 1661 16453 39686;39687 45963;45964 45964 2 SDPDLSSSPR Unmodified 1059.4833 0.4832671 778 D3Z5P0;Q5RJI5 Brsk1 Serine/threonine-protein kinase BRSK1 yes no 0 0 0 0 2 0 1 35.143 35.143 2 0.035743 9434 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 55.531 21.98 0 0 30.296 0 58.576 0 0 0 28 0 56 0 0 0 1 0 1 0 4307.5 17118 778 16454 39688 45965 45965 1 SDPEMGWVPEPPAMTLGASR Acetyl (Protein N-term) 2168.9871 0.98707541 3371 Q9Z140;Q3UYN2;E9QA77 Cpne6 Copine-6 yes no 1 0 0 0 4 0 1 89.549 89.549 3 1.2377E-05 33669 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.047 45.016 5.3349 0 5.0597 7.2607 4.718 5.1954 5 0 5 7 5 5 1 0 1 1 1 1 1267.7 17119 3371 16455 39689 45966 45966 1 SDPFLEFFR Unmodified 1156.5553 0.55530983 633 B7ZCP4;Q8C166;A3KGK7;B7ZCP7;B7ZCP6;B7ZCP5;E9Q806 Cpne1 Copine-1 yes no 0 0 0 0 8 0 1 84.524 84.524 2 0.031805 30146 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.8 41.115 0 68.744 24.874 29.122 0 0 0 65 28 28 0 0 0 1 1 1 0 0 3740.7 17120 633 16456 39690 45967 45967 1 SDPFLEIFR Unmodified 1122.571 0.5709599 2428 Q9D6C8;Q8BLR2;A0A1L1SSY1 Cpne4 Copine-4 yes no 0 0 0 0 7 0 1 81.596 81.596 2 0.010979 29393 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.165 37.144 29.761 0 47.508 47.447 0 69.29 28 0 46 46 0 65 1 0 1 1 0 1 6174 17121 2428 16457 39691 45968 45968 1 SDPFLVFYR Unmodified 1142.576 0.57604528 2573 Q8JZW4;A0A0R4J0J1;Q1RLL3;Q9DC53 Cpne5;Cpne9;Cpne8 Copine-5;Copine-9;Copine-8 yes no 0 0 0 0 8 0 1 76.822 76.822 2 0.014913 26502 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.598 45.263 39.354 0 58.347 45.935 46.006 0 37 0 56 46 46 0 1 0 1 1 1 0 3833.7 17122 2573 16458 39692 45969 45969 1 SDPFMEIYK Unmodified 1128.5161 0.51614714 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 5.67 0.471 1 2 70.609 70.609 2;3 0.0017863 25031 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.009 47.1 128.07 79.938 47.994 89.574 108.03 115.24 120 84 46 83 111 111 2 2 1 1 2 2 16712 17123 3371 16459 39693;39694;39695 45970;45971;45972 45972 3 SDPIMLLK Unmodified 915.50994 0.50993955 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 10 3 1 1 71.052 71.052 2 0.0087661 26313 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.99 26.609 196.85 59.831 226.95 194.64 206.26 221.17 185 65 222 194 213 213 2 1 2 2 2 2 20091 17124 1520 16460 39696;39697 45973;45974 45974 2 SDPNLAR Unmodified 771.38752 0.38751622 319 A0A1W2P6S9;E9PWP6;A0A2I3BRN6;A0A2I3BRM1;Q0VF51;D9HP81;Q9EQZ7 Rims1;Rims2 Regulating synaptic membrane exocytosis protein 2 yes no 0 0 0 0 4 0 1 30.301 30.301 2 0.027446 7001 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.662 44.536 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 3442.3 17125 319 16461 39698 45975 45975 1 SDPNLSAPEK Unmodified 1056.5088 0.50875357 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 4 0 1 44.889 44.889 3 0.0026489 13877 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.435 33.422 48.652 75.607 54.592 27.35 0 39.442 46 75 56 28 0 37 1 1 1 1 0 1 3795.5 17126 343 16462 39699 45976 45976 1 SDPSIVLLLQCDIQK Unmodified 1727.9128 0.91277148 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 8.29 2.12 1 2 2 1 1 85.278 85.278 2;3;4 1.4952E-23 33314 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.85 114.55 217.11 163.73 215.89 219.79 85.377 224.62 204 167 213 214 84 213 4 4 4 5 2 5 45981 17127 1737 16463 39700;39701;39702;39703;39704;39705;39706 45977;45978;45979;45980;45981;45982;45983;45984;45985 45984 9 SDPSIVLLLQCDMQK Unmodified 1745.8692 0.86919211 2392 Q8BGZ1 Hpcal4 Hippocalcin-like protein 4 yes yes 0 0 0 0 9.33 2.62 1 1 1 84.722 84.722 3 2.1385E-17 33098 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 131.96 112.63 88.468 54.9 29.04 28.194 111.19 105.56 84 56 28 28 111 102 2 1 1 1 2 2 16783 17128 2392 16464 39707;39708;39709 45986;45987;45988 45988 3 SDPSIVR Unmodified 772.40792 0.40791731 1832;1734;2763 P62748;P84075;E9PV73;Q91X97;D3YVA2 Hpcal1;Hpca;Ncald Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin;Neurocalcin-delta no no 0 0 0 0 6.25 3.96 1 1 1 1 35.4 35.4 2 0.0052869 8937 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.88 64.782 485.74 744.26 746.14 602.57 291.27 839.71 457 742 745 597 298 793 3 4 3 4 2 3 383460 17129 1734;1832;2763 16465 39710;39711;39712;39713 45989;45990;45991;45992 45991 4 SDPSVVLLQQAQGQWLQVDR Unmodified 2266.1706 0.17059416 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 0 6 0 1 83.84 83.84 3 6.1167E-07 31187 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.87 54.531 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 2069 17130 1896 16466 39714 45993 45993 1 SDPVVSYR Unmodified 921.4556 0.45559579 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 7 3.54 1 1 1 1 40.715 40.715 2 0.0004361 11945 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 153.04 115.94 416.55 104.61 204.94 189 109.41 243.12 398 111 204 185 112 231 4 1 2 2 2 3 57427 17131 1652 16467 39715;39716;39717;39718 45994;45995;45996;45997 45994 4 SDQDYILK Unmodified 980.48148 0.48147619 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 0 0 0 0 5 0 1 55.139 55.139 3 0.015607 18419 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.598 14.352 0 38.603 45.776 37.713 0 39.442 0 37 46 37 0 37 0 1 1 1 0 1 2253.9 17132 1599 16468 39719 45998 45998 1 SDQLTGLSLLPLSEK Unmodified 1599.872 0.87195253 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 7 0 1 82.497 82.497 3 3.3732E-05 29863 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.11 41.282 0 29.048 44.524 78.686 33.766 38.478 0 28 46 75 37 37 0 1 1 1 1 1 4149.8 17133 3266 16469 39720 45999 45999 1 SDQQLDCALDLMR Acetyl (Protein N-term) 1605.7127 0.71269147 1565 P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta yes no 1 0 0 0 6 4.97 1 1 1 83.318 83.318 2 9.3887E-14 30951 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.882 68.308 12.793 8.8923 71.267 8.9271 0 12.792 12 9 71 9 0 12 2 2 3 2 0 2 19352 17134 1565 16470 39721;39722;39723 46000;46001;46002;46003 46001 4 SDQQPPVTR Unmodified 1026.5094 0.50942227 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 3.5 0.5 1 1 29.36 29.36 2 0.0046278 7062 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 86.18 37.083 0 20.216 0 0 38.431 58.599 0 19 0 0 38 56 0 1 0 0 1 2 4152 17135 677 16471 39724;39725 46004;46005 46004 2 SDSAFFWEER Unmodified 1272.5411 0.54111633 347 F8VPK5;A0A1Y7VMN0;P70336;P70335 Rock2;Rock1 Rho-associated protein kinase;Rho-associated protein kinase 2;Rho-associated protein kinase 1 yes no 0 0 0 0 5 0 1 67.816 67.816 2 0.0012601 24325 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.148 69.195 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17136 347 16472 39726 46006 46006 1 SDSEATISR Unmodified 964.44615 0.44615331 1128 Q6A065;H7BX26;A0A0A6YXK7 Cep170 Centrosomal protein of 170 kDa yes no 0 0 0 0 2 0.816 1 1 1 29.991 29.991 2 0.0057072 7073 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.645 27.114 20.387 0 0 50.685 55.658 87.956 19 0 0 47 56 84 1 0 0 2 2 3 7779.8 17137 1128 16473 39727;39728;39729 46007;46008;46009 46008 3 SDSENGEEEEAAEAGAFNAPVINR Unmodified 2505.0892 0.089168536 1495 P31324 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes yes 0 0 0 0 1.5 0.5 1 1 61 61 3 5.9501E-07 20086 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 57.432 47.845 0 9.576 0 9.837 9 0 0 9 0 9 9 0 0 1 0 1 1 0 1899.3 17138 1495 16474 39730;39731 46010;46011 46010 2 SDSETEGLVFAR Unmodified 1309.615 0.61500956 526 A2AUK5;A2AUK8 Epb4.1l1 yes no 0 0 0 0 3.5 0.5 1 1 56.329 56.329 2;3 3.6462E-08 19635 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.11 73.223 20.149 19.899 58.909 8.706 38.702 0 19 19 56 9 37 0 1 1 2 1 1 0 6318.5 17139 526 16475 39732;39733 46012;46013 46012 2 SDSGGSSSEPFER Unmodified 1340.5481 0.5480522 1063 Q7TSC1;G3UX48 Prrc2a Protein PRRC2A yes no 0 0 0 0 1 0 1 37.014 37.014 2 0.00022697 9867 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.214 50.323 20.24 0 24.784 0 19.874 0 19 0 23 0 19 0 1 0 1 0 1 0 2697.3 17140 1063 16476 39734 46014 46014 1 SDSLAGVVIADSEYPSR Unmodified 1764.853 0.853008 2945 Q9CQW1 Ykt6 Synaptobrevin homolog YKT6 yes yes 0 0 0 0 5 0 1 68.638 68.638 3 0.0089075 24814 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.179 27.552 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 4070.9 17141 2945 16477 39735 46015 46015 1 SDSLDNEEKPPAPPLR Acetyl (Protein N-term) 1805.8796 0.8795571 2106 Q61036;A3KGC5;A3KGC4;A3KGC3;A3KGC2 Pak3 Serine/threonine-protein kinase PAK 3 yes no 1 0 0 1 2 0 1 55.002 55.002 3 0.00053901 18342 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 53.995 45.429 60.006 16.17 0 0 58.576 0 56 19 0 0 56 0 1 1 0 0 1 0 9597 17142 2106 16478 39736 46016 46016 1 SDSPSSQR Unmodified 862.37807 0.37807375 2453 Q8BTG3 Tcp11l1 T-complex protein 11-like protein 1 yes yes 0 0 0 0 2 0 1 17.12 17.12 2 0.020869 2650 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.732 14.167 4.222 7.0667 5.782 5.9431 14.371 0 4 7 6 6 14 0 1 1 1 1 1 0 934.27 17143 2453 16479 39737 46017 46017 1 SDSTIPSSDR Unmodified 1063.4782 0.47818172 3452 S4R2T7 Ank2 yes yes 0 0 0 0 6.67 4.5 1 1 1 32.175 32.175 2 3.1937E-05 8397 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.5 46.899 142.94 111.91 75.315 115 173.85 144.59 134 111 79 111 176 139 2 2 1 1 3 2 27402 17144 3452 16480 39738;39739;39740 46018;46019;46020 46018 3 SDTAAAAVR Unmodified 860.43519 0.4351947 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 8.5 4.5 1 1 30.143 30.143 2 0.0010136 7052 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 107.29 56.235 0 37 0 40.441 0 44.772 0 37 0 37 0 42 0 1 0 1 0 1 36226 17145 1876 16481 39741;39742 46021;46022 46021 2 SDTAYQWNLK Unmodified 1224.5775 0.57750184 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 8.67 3.09 1 1 1 60.436 60.436 2;3 7.7016E-05 19568 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.98 68.91 206.89 169.88 205.46 90.54 281.02 163.45 194 176 204 93 278 158 2 3 3 2 3 2 20978 17146 1093 16482 39743;39744;39745 46023;46024;46025 46024 3 SDTLQISDLLVSESR Unmodified 1661.8472 0.84719434 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 7.2 2.99 2 1 1 1 76.688 76.688 2;3 2.2028E-07 28005 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.14 83.343 69.557 76.723 0 183.25 125.86 116.89 65 74 0 169 130 111 2 2 0 4 4 3 34986 17147 1424 16483 39746;39747;39748;39749;39750 46026;46027;46028;46029;46030 46028 5 SDTLQISDLLVSESREEFVETCPGELK Unmodified 3080.486 0.4859758 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 4.5 0.5 1 1 84.385 84.385 4 0.0019743 32073 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.843 26.041 0 39.368 8.8364 49.977 46.1 18.939 0 37 9 47 46 19 0 1 1 2 1 1 6147.1 17148 1424 16484 39751;39752 46031;46032 46032 2 SDTPYLAEAR Unmodified 1121.5353 0.53530267 1907 Q2M3X8 Phactr1 Phosphatase and actin regulator 1 yes yes 0 0 0 0 4 0 1 46.108 46.108 2 0.01018 14373 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.27 23.024 49.148 0 35.352 99.542 0 59.696 46 0 37 93 0 56 1 0 1 1 0 1 5434 17149 1907 16485 39753 46033 46033 1 SDTQQSEVTLSEPSVLSSTSQFQAEPVEGR Unmodified 3222.5164 0.51642431 3451 S4R2R5;S4R2Q9 Ank2 yes no 0 0 0 0 4 0 1 70.247 70.247 4 0.0010573 25478 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.166 24.318 9.657 0 0 9.837 0 29.848 9 0 0 9 0 28 1 0 0 1 0 1 3141.8 17150 3451 16486 39754 46034 46034 1 SDTSDIHSGR Unmodified 1073.4738 0.47376505 2482 Q8BZZ3 Wwp1 NEDD4-like E3 ubiquitin-protein ligase WWP1 yes yes 0 0 0 0 3 0 1 21.796 21.796 3 0.040616 3674 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.883 25.513 40.573 17.157 19.324 0 0 29.848 38 19 19 0 0 28 1 1 1 0 0 1 788.12 17151 2482 16487 39755 46035 46035 1 SDTSEEIPNFEEMFASR Acetyl (Protein N-term) 2029.8575 0.85750103 731 D3YZS0;Q9CQY2 Fam103a1 RNMT-activating mini protein yes no 1 0 0 0 3 0 1 92.972 92.972 2 1.5874E-18 32157 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 45.79 31.532 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17152 731 16488 39756 46036 46036 1 SDTSGHFQR Unmodified 1033.4577 0.45772105 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 4 0 1 23.757 23.757 3 0.00029266 4220 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.46 73.718 69.745 0 0 0 19.874 0 65 0 0 0 19 0 1 0 0 0 1 0 2181.3 17153 1848 16489 39757 46037 46037 1 SDTTFLFLVGQDDHNWK Unmodified 2021.9483 0.94830537 3282;1240 O55137;Q9QYR9 Acot1;Acot2 Acyl-coenzyme A thioesterase 1;Acyl-coenzyme A thioesterase 2, mitochondrial no no 0 0 0 0 7 0 1 79.761 79.761 3 2.8283E-12 28541 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117 102.3 20.387 0 0 49.593 36.424 0 19 0 0 46 37 0 1 0 0 1 1 0 3678.9 17154 1240;3282 16490 39758 46038 46038 1 SDVAILYNDR Unmodified 1164.5775 0.57750184 2451 Q8BRR9;Q61481;F6X0V1;Q9JLL9;Q5I7S8;A2ASF9 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 4 0 1 55.735 55.735 2 0.0082552 19028 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.435 20.438 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17155 2451 16491 39759 46039 46039 1 SDVEAIFSK Unmodified 994.49713 0.49712625 3389 Q9Z204;A0A2I3BRM6;A0A2I3BQH3 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 8.67 3.09 1 1 1 66.958 66.958 2;3 0.001004 23358 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.584 39.729 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17156 3389 16492 39760;39761;39762 46040;46041;46042 46040 3 SDVEIPATVTAFSFEDDSAPLSPLK Unmodified 2635.2905 0.29049411 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 5 0 1 91.261 91.261 3 4.6828E-20 34624 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.885 68.576 0 5.32 0 0 0 6.396 0 5 0 0 0 6 0 1 0 0 0 1 1124.3 17157 3274 16493 39763 46043 46043 1 SDVLETVVLINPSDEAVSTEVR Unmodified 2371.2118 0.21184985 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.33 4.03 1 1 1 83.723 83.723 3 5.037E-16 31800 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.227 66.092 48.983 56.926 14.701 29.728 67.99 35.178 46 56 14 28 65 33 2 1 1 2 1 2 19290 17158 1382 16494 39764;39765;39766 46044;46045;46046 46045 3 SDVLETVVLINPSDEAVSTEVR Deamidation (N) 2372.1959 0.19586544 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 1 0 0 6 0 1 83.688 83.688 3 6.2822E-06 31156 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.882 38.518 5.3185 9.2174 0 0 18.663 4.7974 5 9 0 0 18 5 1 1 0 0 1 1 2601.9 17159 1382 16494 39767 46047 46047 447 1 SDVLQPGAEVTTDDR Unmodified 1601.7533 0.75329395 366 G3X972;A0A286YDI8 Sec24c yes no 0 0 0 0 2.5 0.5 1 1 51.337 51.337 3 0.010335 16809 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.912 24.796 29.945 19.571 0 0 0 99.138 28 19 0 0 0 93 2 1 0 0 0 2 6987.5 17160 366 16495 39768;39769 46048;46049 46048 2 SDVWSFGILLTELVTK Unmodified 1806.9768 0.97675195 1535 P39688;D3YZ57 Fyn Tyrosine-protein kinase Fyn;Non-specific protein-tyrosine kinase yes no 0 0 0 0 11 0 1 117.48 117.48 3 0.0012572 37082 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.874 39.604 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 717.46 17161 1535 16496 39770 46050 46050 1 SDVWSLGITLYELATGR Unmodified 1879.968 0.96797818 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 114.46 114.46 3 1.589E-14 34602 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.767 70.177 0 17.024 0 11.854 15.001 18.337 0 16 0 11 15 18 0 2 0 2 2 2 5160.5 17162 1567 16497 39771;39772;39773;39774 46051;46052;46053;46054;46055 46051 5 SDYISEDALASLPGFR Unmodified 1739.8366 0.83662965 2380 Q8BGN3;D3YU63;A0A1B0GS66 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 0 0 0 5.5 0.5 1 1 81.384 81.384 3 0.0056067 30854 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.647 26.757 29.802 47.998 0 50.509 45.834 29.336 28 47 0 47 47 28 1 1 0 2 2 1 3629.3 17163 2380 16498 39775;39776 46056;46057 46056 2 SDYLNTFEFMDK Unmodified 1508.6493 0.64934615 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 6 0 1 80.61 80.61 2 0.031422 29729 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.284 23.611 9.657 0 0 30.453 8.0151 0 9 0 0 28 9 0 1 0 0 1 1 0 1380.1 17164 1278 16499 39777 46058 46058 1 SEADTLPR Unmodified 887.43486 0.43486035 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 0 3 0 1 36.417 36.417 2 0.028422 10322 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.26 30.425 49.074 56.275 0 0 67.99 0 46 56 0 0 65 0 1 1 0 0 1 0 20427 17165 2167 16500 39778 46059 46059 1 SEAELATALSDK Unmodified 1233.6089 0.60886155 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 4 0 1 63.399 63.399 3 0.011725 22446 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.481 13.983 0 0 38.774 28.293 0 0 0 0 37 28 0 0 0 0 1 1 0 0 4284.3 17166 182 16501 39779 46060 46060 1 SEAESLK Unmodified 762.37595 0.37594848 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 no no 0 0 0 0 13 0 1 39.29 39.29 2 0.062375 11134 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 73.26 25.411 78.337 81.187 110.24 103.08 97.659 125.13 74 83 111 102 102 120 1 1 1 1 1 1 9431.8 17167 1752 16502 39780 46061 46061 1 SEAGAEGGTVQNGCQDEPK Deamidation (N) 1933.796 0.7959634 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 1 0 0 1 0 1 39.702 39.702 3 4.2341E-07 11117 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.676 68.64 9.4714 8.5368 23.959 8.2391 9.0355 0 9 9 23 9 9 0 1 1 1 1 1 0 2976.6 17168 1603 16503 39781 46062 46062 615 1 SEAGLAGAPAR Unmodified 998.51451 0.51450765 3149 Q9DCR2 Ap3s1 AP-3 complex subunit sigma-1 yes yes 0 0 0 0 4 0 1 36.305 36.305 2 0.0044167 9743 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.371 39.284 0 0 0 0 37.054 47.979 0 0 0 0 37 46 0 0 0 0 1 1 3052.6 17169 3149 16504 39782 46063 46063 1 SEAPNWATQDSGFY Unmodified 1571.6529 0.65285163 1667 P60229 Eif3e Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 0 4 0 1 72.762 72.762 2 0.024925 26602 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.44 29.825 9.535 0 20.51 0 0 20.254 9 0 19 0 0 19 1 0 1 0 0 1 2206.5 17170 1667 16505 39783 46064 46064 1 SEAVVAVLLTK Unmodified 1128.6754 0.67542497 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 11 2 1 1 78.77 78.77 2;3 0.00055352 26729 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.655 43.709 48.92 45.053 35.431 37.12 64.298 57.861 46 46 37 37 65 56 1 1 1 1 1 1 6044.4 17171 1412 16506 39784;39785 46065;46066 46065 2 SECAILYNDR Unmodified 1239.5554 0.55538619 373 Q6PDS5;A0A2I3BPC1;Q01065 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 4 0 1 47.908 47.908 2 0.046067 15242 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.79 17.494 0 0 0 0 47.137 28.503 0 0 0 0 46 28 0 0 0 0 1 1 3223.5 17172 373 16507 39786 46067 46067 1 SEDCFILDHGR Unmodified 1347.5877 0.58774895 1365 P13020;A0A0J9YUQ8 Gsn Gelsolin yes no 0 0 0 0 3.5 0.5 1 1 48.021 48.021 3 0.021393 15710 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.501 29.343 0 38.738 37.71 0 58.576 0 0 37 37 0 56 0 0 1 1 0 1 0 2824.2 + 17173 1365 16508 39787;39788 46068;46069 46068 2 SEDDAASGEHDIQIEGVR Unmodified 1926.8555 0.85552719 2362 Q8BFT9;D3Z379 Svop Synaptic vesicle 2-related protein yes no 0 0 0 0 1 0 1 46.008 46.008 3 2.7533E-09 13545 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.93 95.985 40.686 17.473 0 20.252 27.359 29.067 38 19 0 19 28 28 1 1 0 1 1 1 5034 17174 2362 16509 39789 46070 46070 1 SEDGHYAR Unmodified 933.39406 0.39405816 3281 Q9QYM9 Tmeff2 Tomoregulin-2 yes yes 0 0 0 0 1.5 0.5 1 1 19.644 19.644 3 0.0052306 2947 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.301 47.505 8.5302 14.002 19.046 14.108 27.382 6.1633 8 14 19 14 27 6 1 2 2 1 2 1 2297.4 17175 3281 16510 39790;39791 46071;46072 46071 2 SEDLLDVDTAAGGFQQR Unmodified 1820.8541 0.85407063 540 A2BHN6;Q9DC63 Fbxo3 F-box only protein 3 yes no 0 0 0 0 4 0 1 67.714 67.714 3 0.0017707 24315 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.623 23.668 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17176 540 16511 39792 46073 46073 1 SEDQDLQGLR Unmodified 1159.5469 0.54692999 790;3394 D3Z7U4;D3YY81;Q9Z2D6 Mecp2 Methyl-CpG-binding protein 2 no no 0 0 0 0 2 0 1 43.834 43.834 2 0.053553 13487 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.762 28.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17177 790;3394 16512 39793 46074 46074 1 SEDYAFPTYADR Unmodified 1433.6099 0.60992418 1418 P19783 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 0 6.25 3.96 1 1 1 1 56.964 56.964 2;3 1.8537E-22 19621 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 163.83 108.05 143.35 52.222 171.77 128.25 17.99 24.005 134 56 167 125 19 23 2 1 3 2 1 1 72018 17178 1418 16514 39794;39795;39796;39797 46075;46076;46077;46078;46079 46076 5 SEDYAFPTYADRR Unmodified 1589.711 0.71103521 1418 P19783 Cox4i1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial yes yes 0 0 0 1 5 0 1 49.368 49.368 3 0.041311 15670 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.426 32.374 0 38.28 65.079 66.319 45.07 0 0 37 65 65 46 0 0 1 1 1 1 0 3842.5 17179 1418 16515 39798 46080 46080 1 SEEEFTGV Unmodified 896.37634 0.37634241 2440 Q8BP27 Sfr1 Swi5-dependent recombination DNA repair protein 1 homolog yes yes 0 0 0 0 1.5 0.5 1 1 57.384 57.384 2 0.001214 18279 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 137.44 100.42 50.25 35.98 0 30.604 8.727 60.513 47 37 0 28 9 57 2 2 0 1 1 2 10806 17180 2440 16516 39799;39800 46081;46082 46081 2 SEEEFVHINNK Unmodified 1344.631 0.63099397 2872 Q99MN1;Q8R2P8 Kars Lysine--tRNA ligase yes no 0 0 0 0 4 0 1 48.835 48.835 3 0.0015865 15722 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.624 41.426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17181 2872 16517 39801 46083 46083 1 SEEEQSSASVK Unmodified 1179.5255 0.52552585 3389 Q9Z204 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 0 2.5 0.5 1 1 34.478 34.478 2;3 2.9986E-08 9489 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.6 73.64 49.076 29.493 65.375 65.947 63.878 87.721 46 28 65 65 65 84 1 1 2 2 1 2 15889 17182 3389 16518 39802;39803 46084;46085 46085 2 SEEETSPLVTHQNPAGPVAIAPELESK Unmodified 2829.4032 0.40323245 1213 O35874;Q5SSP3 Slc1a4 Neutral amino acid transporter A;Amino acid transporter yes no 0 0 0 0 4 0 1 65.271 65.271 4 3.9903E-12 23225 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.655 54.467 0 0 30.296 0 27.631 48.248 0 0 28 0 28 46 0 0 1 0 1 1 4657.2 17183 1213 16519 39804 46086 46086 1 SEEHIDSK Unmodified 943.42469 0.42468959 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 3 0.816 1 1 1 31.123 31.123 3 0.00082656 7925 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.21 77.781 98.122 408.47 670.12 523.56 851.9 626.5 93 396 664 527 858 607 2 2 4 3 4 2 62755 17184 1424 16520 39805;39806;39807 46087;46088;46089;46090 46089 4 SEEITTGSAWFSFLESHNK Unmodified 2169.0015 0.0014631481 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 0 7 1 1 1 78.944 78.944 3;4 2.6883E-05 27584 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.577 34.039 89.436 130.27 120.95 131.7 110.87 87.463 84 130 121 129 111 83 2 3 2 3 2 2 16518 17185 2143 16521 39808;39809 46091;46092;46093 46093 3 SEEITTGSAWFSFLESHNKLDK Unmodified 2525.2074 0.20743318 2143 Q62048;D3Z375 Pea15;Pea15a Astrocytic phosphoprotein PEA-15 yes no 0 0 0 1 8 0 1 77.844 77.844 4 3.4539E-09 27038 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.002 49.325 0 38.231 68.036 0 46.111 58.38 0 37 65 0 46 56 0 1 1 0 1 1 4243.2 17186 2143 16522 39810 46094 46094 1 SEEKPETVEEEDR Unmodified 1575.69 0.69002499 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 1 1.5 0.5 1 1 36.673 36.673 3 5.3285E-07 9586 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.64 73.481 168.11 145.25 116.85 101.2 176.53 85.052 158 149 121 102 176 83 2 2 2 2 2 1 30648 17187 2403 16523 39811;39812 46095;46096 46095 2 SEELSLPEGK Unmodified 1087.5397 0.53971935 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9;E9Q405;A0A1C7ZN10 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 4.5 0.5 1 1 55.883 55.883 2;3 0.01451 18788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.092 24.419 20.387 0 0 0 48.116 0 19 0 0 0 46 0 1 0 0 0 1 0 1693 17188 620 16524 39813;39814 46097;46098 46098 2 SEEMTLAQLFLQSEAAYCCVSELGELGK Unmodified 3162.4559 0.455938 1151 K3W4T3;Q9Z1G4;A2A599 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 10 3 1 1 109.15 109.15 4 7.7445E-31 44234 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.57 107.04 11.759 6.6251 1.7941 5.3581 6.0256 7.2901 11 7 2 5 6 7 2 2 1 1 1 1 2281.4 17189 1151 16525 39815;39816 46099;46100 46100 2 SEENTKEEK Unmodified 1092.4935 0.49349744 2856 Q99L47;E9Q1V0;E9Q1X9 St13 Hsc70-interacting protein yes no 0 0 0 1 4 0 1 31.55 31.55 3 0.041022 7599 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.49 26.047 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 1602.2 17190 2856 16526 39817 46101 46101 1 SEEPDSDTK Unmodified 1006.4091 0.40909911 3190 Q9ERU9 Ranbp2 E3 SUMO-protein ligase RanBP2 yes yes 0 0 0 0 1 0 1 32.411 32.411 2 0.001615 7880 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.02 41.202 0 0 18.853 38.267 55.848 28.254 0 0 19 37 56 28 0 0 1 1 1 1 2670.1 17191 3190 16527 39818 46102 46102 1 SEEQLKEEGIEFK Unmodified 1564.7621 0.76206772 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 1 7.14 3.83 1 1 1 2 2 58.892 58.892 3;4 3.8078E-05 20175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.3 73.655 1035 1047.2 990.07 393.07 666.86 901.02 974 1060 977 383 667 858 7 7 6 4 6 5 131740 17192 1164 16528 39819;39820;39821;39822;39823;39824;39825 46103;46104;46105;46106;46107;46108;46109;46110 46109 8 SEEQWVSLSSEEFDQLQK Acetyl (Protein N-term) 2210.0015 0.0015227276 2498 Q91WG7;Q8C413;F2Z409 Dgkg Diacylglycerol kinase gamma;Diacylglycerol kinase yes no 1 0 0 0 3.5 0.5 1 1 91.197 91.197 3 1.3311E-09 32019 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.158 45.739 6.4068 6.384 5.2456 15.92 8.6077 11.48 6 6 5 15 9 11 1 1 1 2 1 2 5293 17193 2498 16529 39826;39827 46111;46112 46111 2 SEETLDEGPPK Unmodified 1200.551 0.55101232 2161 Q62446 Fkbp3 Peptidyl-prolyl cis-trans isomerase FKBP3 yes yes 0 0 0 0 2.5 0.5 1 1 46.328 46.328 2;3 5.7274E-11 14525 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 142.83 112.57 49.074 94.877 45.807 37.015 102.68 67.416 46 93 46 37 102 65 1 2 1 1 2 1 15331 17194 2161 16530 39828;39829 46113;46114 46113 2 SEFIGLQLLDILTR Unmodified 1616.9138 0.91375776 959 Q0GNC1;E9QLA5 Inf2 Inverted formin-2 yes no 0 0 0 0 10.5 0.5 1 1 106.59 106.59 3 0.00010837 33782 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.261 45.55 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 716.61 17195 959 16531 39830;39831 46115;46116 46115 2 SEGAAEEQPEPAPAPEQEAAAPGPAAGGEAPK Unmodified 3010.3792 0.37920255 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 3.67 4.23 2 2 1 1 50.723 50.723 4;5 1.7109E-09 15209 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.119 42.316 40.231 192.66 191.33 47.621 169.54 313.1 38 186 185 47 167 297 2 4 3 2 4 5 258630 17196 2769 16532 39832;39833;39834;39835;39836;39837 46117;46118;46119;46120;46121;46122;46123 46117 7 SEGEIAR Unmodified 760.37153 0.37153181 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 2 0.816 1 1 1 28.074 28.074 2 0.0018387 5897 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 154.35 59.948 977.88 745.26 928.86 894.73 1037 1092.5 920 777 932 880 1055 1048 4 4 3 3 3 2 295790 17197 2132 16533 39838;39839;39840 46124;46125;46126;46127 46124 4 SEGEVAR Unmodified 746.35588 0.35588174 1595 P50396;B7FAU8 Gdi1 Rab GDP dissociation inhibitor alpha yes no 0 0 0 0 13 0 1 23.474 23.474 2 0.035629 3614 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.784 20.996 29.807 0 39.884 0 38.702 0 28 0 37 0 37 0 1 0 1 0 1 0 17492 17198 1595 16534 39841 46128 46128 1 SEGGFIWACK Unmodified 1153.5226 0.5226295 1278 O88844 Idh1 Isocitrate dehydrogenase [NADP] cytoplasmic yes yes 0 0 0 0 7.5 0.5 1 1 65.903 65.903 3 0.011459 21291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.276 32.496 87.961 70.721 124.66 35.449 111.53 116.21 83 74 121 37 112 112 2 2 2 1 2 2 9246.8 17199 1278 16535 39842;39843 46129;46130 46130 2 SEGGLSAAPAR Unmodified 1014.5094 0.50942227 2452 Q8BSZ2 Ap3s2 AP-3 complex subunit sigma-2 yes yes 0 0 0 0 4 0 1 34.565 34.565 2 3.9368E-08 8950 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.55 73.68 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 3574.7 17200 2452 16536 39844 46131 46131 1 SEGHEEKPLPPAQSQTQEGGPAAGK Unmodified 2529.2096 0.20955844 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 4 0 1 42.294 42.294 4 1.9123E-17 12586 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.237 64.927 0 39.368 0 40.441 0 0 0 37 0 37 0 0 0 1 0 1 0 0 3089.3 17201 2295 16537 39845 46132 46132 1 SEGLPSECR Unmodified 1033.4499 0.44985848 2643 Q8R1H0 Hopx Homeodomain-only protein yes yes 0 0 0 0 3 0 1 35.677 35.677 2 0.00035659 10077 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.56 71.848 39.516 36.703 0 49.042 65.737 0 37 37 0 46 65 0 1 1 0 1 1 0 4703.4 17202 2643 16538 39846 46133 46133 1 SEGYFGMYR Unmodified 1108.4648 0.46478027 3075 Q9D6M3;E9PY45;E9PV90;E9Q6M6;Q80X52;E9Q579;A0A0J9YUX4;A0A0J9YUJ4;V9GWS2 Slc25a22 Mitochondrial glutamate carrier 1 yes no 0 0 0 0 13 0 1 55.186 55.186 2 0.0038271 18850 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.819 60.122 108.26 69.082 140.83 109.44 185.63 83.181 102 74 139 111 185 83 1 1 1 1 1 1 11555 17203 3075 16539 39847 46134 46134 1 SEHSSEGELAK Unmodified 1172.5309 0.53094558 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 3 0 1 32.728 32.728 3 0.00061673 8659 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.655 47.643 49.028 35.639 25.3 58.607 0 39.442 46 37 28 55 0 37 1 1 1 1 0 1 7655 17204 1147 16540 39848 46135 46135 1 SEIDLFNIR Unmodified 1105.5768 0.57677356 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 6.5 0.5 1 1 72.33 72.33 2 0.0014062 25831 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.46 56.039 363.36 314.55 340.2 205.1 524.84 342.21 342 324 342 203 522 333 4 4 4 2 4 3 28543 17205 1577 16541 39849;39850 46136;46137;46138;46139 46136 4 SEIDLVQIK Unmodified 1043.5863 0.58627561 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 8 3.56 1 1 1 66.267 66.267 3 0.0008403 24042 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.308 27.288 46 88.464 54.545 56.727 103.1 28.772 46 84 56 56 102 28 1 2 1 1 2 1 14409 17206 372 16542 39851;39852;39853 46140;46141;46142 46142 3 SEILDETDLYTDNR Unmodified 1682.7635 0.76352429 367 A0A286YDL2;Q3TWN3;Q0GA42 Cnnm2;Cnnm1 Metal transporter CNNM2;Metal transporter CNNM1 yes no 0 0 0 0 2 0 1 65.085 65.085 3 0.0074572 23238 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.115 31.702 20.292 18.848 0 0 19.874 0 19 19 0 0 19 0 1 1 0 0 1 0 1019 17207 367 16543 39854 46143 46143 1 SEILSAILVPLTVR Unmodified 1509.913 0.91302948 2389 Q8BGW1 Fto Alpha-ketoglutarate-dependent dioxygenase FTO yes yes 0 0 0 0 6.5 5.5 1 1 95.553 95.553 2;3 7.7724E-05 33311 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.468 67.526 18.108 7.3058 16.149 9.837 17.958 34.934 17 7 15 9 18 33 2 1 1 1 2 2 2564.6 17208 2389 16544 39855;39856 46144;46145;46146 46144 3 SEINVEGPPR Unmodified 1096.5513 0.55128709 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 6.67 4.5 1 1 1 43.249 43.249 2 2.0959E-08 13553 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 145.99 100.11 217.94 89.577 194.59 116.3 154.81 99.138 204 93 185 111 148 93 2 1 2 1 2 1 45770 17209 1147 16545 39857;39858;39859 46147;46148;46149 46147 3 SEIQAEQDR Unmodified 1074.4942 0.49416614 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 5.33 5.44 1 1 1 30.919 30.919 2 2.2736E-72 7482 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 227.27 144.56 312.27 237.22 335.01 237.28 218.22 89.978 294 248 334 235 222 86 4 4 4 3 4 1 195760 17210 2517 16546 39860;39861;39862 46150;46151;46152;46153 46152 4 SEITELR Unmodified 846.4447 0.44469675 659 CON__P13645;CON__P02535-1;A2A513;P02535 Krt10 Keratin, type I cytoskeletal 10 yes no 0 0 0 0 4 0 1 44.028 44.028 2 0.023151 13422 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.47 35.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 17211 659 16547 39863 46154 46154 1 SEITELRR Unmodified 1002.5458 0.54580778 659 CON__P13645;CON__P02535-1;A2A513;P02535 Krt10 Keratin, type I cytoskeletal 10 yes no 0 0 0 1 4.5 0.5 1 1 36.588 36.588 3 0.0076529 9425 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.368 19.212 178.58 42.23 67.384 57.192 0 148.17 167 46 65 56 0 139 2 1 1 1 0 2 15189 + 17212 659 16548 39864;39865 46155;46156 46156 2 SEKEQLQALNDR Deamidation (N) 1430.7001 0.70013617 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 1 0 1 4 0 1 45.058 45.058 3 0.0020625 14034 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.345 21.786 99.789 0 0 50.278 0 0 93 0 0 46 0 0 1 0 0 1 0 0 6444.1 17213 1415 16549 39866 46157 46157 518 1 SEKETVIVEGQTEEIR Unmodified 1845.932 0.9319866 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 1 8 5 1 1 50.417 50.417 3 9.3003E-05 17340 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.829 59.239 59.473 93.253 101.04 77.09 130.12 67.517 56 93 102 74 130 65 1 2 2 1 2 1 15890 17214 1415 16550 39867;39868 46158;46159 46158 2 SELDLLDIR Unmodified 1072.5764 0.57643921 1848 P97384 Anxa11 Annexin A11 yes yes 0 0 0 0 7.33 4.03 1 1 1 73.352 73.352 2 0.010741 26906 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.464 0 139.12 27.124 38.596 27.821 73.772 108 130 28 37 28 74 102 3 1 1 1 2 2 10799 17215 1848 16551 39869;39870;39871 46160;46161;46162 46160 3 SELDMLDIR Unmodified 1090.5329 0.53285983 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 68.8 68.8 2 0.0055377 24782 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.92 39.302 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17216 1050;1380 16552 39872 46163 46163 1 SELDQLRQEAEQLK Acetyl (Protein N-term) 1727.869 0.86899241 1750 P62874;H3BKR2;H3BLF7 Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 yes no 1 0 0 1 8.25 4.76 1 1 2 77.083 77.083 2;3 8.0936E-32 28790 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.591 68.73 444.67 318.03 376.46 352.11 315 134.72 418 333 376 345 315 130 3 3 2 2 3 1 272270 17217 1750 16553 39873;39874;39875;39876 46164;46165;46166;46167;46168 46166 5 SELDTIDSQHR Unmodified 1299.6055 0.6055075 1544;502 A2APL5;F6ZRK3;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 2.5 1.12 1 1 1 1 39.311 39.311 3 5.7739E-115 11577 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 244.74 193.29 2205.5 1479.8 1948.7 1327.8 1107.5 2127.6 2073 1552 1948 1322 1170 2025 7 5 8 4 6 7 753770 17218 502;1544 16554 39877;39878;39879;39880 46169;46170;46171;46172;46173;46174;46175;46176 46170 8 SELEEDIIPEEDIISR Unmodified 1885.9157 0.91566783 1297 P01027 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 0 1.5 0.5 1 1 75.49 75.49 3 1.1638E-05 27224 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.983 59.289 26.674 0 25.327 35.652 0 20.254 25 0 25 34 0 19 2 0 2 2 0 1 4715.1 17219 1297 16555 39881;39882 46177;46178 46178 2 SELELTLGK Unmodified 988.54408 0.54407645 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 6 0 1 65.345 65.345 2 0.024444 22542 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.582 21.581 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17220 3266 16556 39883 46179 46179 1 SELEQLR Acetyl (Protein N-term) 915.46616 0.46616048 1751;1485 P29387;P62880;D3Z1M1;D3Z1T4;A0A0A6YVN9;V9GWY1 Gnb4;Gnb2 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 1 0 0 0 13 0 1 53.771 53.771 2 0.025364 18087 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.485 36.53 108.87 51.355 53.121 86.215 71.134 67.26 102 56 56 83 74 65 1 1 1 1 1 1 27156 17221 1485;1751 16557 39884 46180 46180 1 SELEQLRQEAEQLR Acetyl (Protein N-term) 1769.8908 0.89079049 1751;1485 P29387;P62880;D3Z1M1;D3Z1T4;A0A0A6YVN9;V9GWY1 Gnb4;Gnb2 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 no no 1 0 0 1 6.33 4.78 1 1 1 72.189 72.189 2;3 2.3134E-06 26917 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.164 6.933 29.952 37.196 0 0 28.62 19.437 28 38 0 0 28 19 1 2 0 0 1 1 34506 17222 1485;1751 16558 39885;39886;39887 46181;46182;46183;46184 46184 4 SELPSSAPGGGGV Unmodified 1113.5302 0.5302173 230 A0A0U1RPY2;P59648 Fxyd7 FXYD domain-containing ion transport regulator 7 yes no 0 0 0 0 6.25 3.96 1 1 1 1 53.188 53.188 2 2.1572E-18 17594 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.51 119.11 177.17 143.26 294.65 175.81 255.64 290.12 167 148 287 176 260 279 4 3 4 3 4 6 101530 17223 230 16559 39888;39889;39890;39891 46185;46186;46187;46188;46189;46190 46189 6 SELPSSR Unmodified 774.38718 0.38718187 953 E9QK48;D6RGM3;Q7TNG5;A0A0U1RPM7;A0A0U1RQ42 Eml2 Echinoderm microtubule-associated protein-like 2 yes no 0 0 0 0 4 0 1 31.379 31.379 2 0.039057 7497 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.451 8.0731 29.514 36.404 58.259 0 0 39.442 28 37 56 0 0 37 1 1 1 0 0 1 4171.1 17224 953 16560 39892 46191 46191 1 SELSCAPK Unmodified 890.41677 0.41676744 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 6 0 1 41.484 41.484 2 0.012195 11346 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.37 25.213 108.72 70.351 63.062 56.098 71.859 86.427 102 74 65 56 74 83 1 1 1 1 1 1 7260.5 17225 3336 16561 39893 46192 46192 1 SELSGNFEK Unmodified 1009.4716 0.47163978 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 5.5 0.5 1 1 51.112 51.112 2;3 0.01185 16526 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.756 25.588 39.167 75.668 25.559 0 37.384 38.375 37 74 28 0 37 37 1 1 1 0 1 1 2247.2 17226 1848 16562 39894;39895 46193;46194 46193 2 SELVPEPR Acetyl (Protein N-term) 967.49746 0.4974606 402 A0A2R8W6V9 yes yes 1 0 0 0 13 0 1 54.236 54.236 2 0.023642 18371 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.349 35.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17227 402 16563 39896 46195 46195 1 SEMEADIK Unmodified 921.41135 0.41134771 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 4 0 1 47.971 47.971 2 0.02409 15270 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.825 27.029 69.745 0 0 0 48.116 0 65 0 0 0 46 0 1 0 0 0 1 0 2724.2 17228 3241 16564 39897 46196 46196 1 SEMLEIVQAIYK Unmodified 1422.7429 0.74285261 1734 P62748;A0A1Y7VMK3 Hpcal1 Hippocalcin-like protein 1 yes no 0 0 0 0 8 0 1 88.93 88.93 3 0.00017088 32157 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.014 7.4833 9.657 0 0 20.332 23.124 0 9 0 0 19 23 0 1 0 0 1 1 0 2782.6 17229 1734 16565 39898 46197 46197 1 SEMTDDLVTDAR Unmodified 1351.5926 0.59255956 1632 P56213 Gfer FAD-linked sulfhydryl oxidase ALR yes yes 0 0 0 0 2 0 1 53.421 53.421 2 0.00090397 17655 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.489 51.845 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 1746.8 17230 1632 16566 39899 46198 46198 1 SENEEELEK Unmodified 1105.4775 0.47751302 768 D3Z3F4;F7C846;G3XA66;P47802;D3YVW0;G3UYJ5;G3XA75;G3UXX9 Mtx1 Metaxin-1 yes no 0 0 0 0 1 0 1 41.67 41.67 2 0.0062991 11862 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.706 32.066 39.613 17.545 0 0 28.877 11.968 37 19 0 0 28 12 1 1 0 0 1 1 3568 17231 768 16567 39900 46199 46199 1 SENEEFVEVGR Unmodified 1293.5837 0.58370943 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 0 2 0.816 1 1 1 49.007 49.007 2;3 8.4594E-13 14648 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 144.27 84.623 78.747 53.188 95.253 40.063 65.573 49.564 74 56 93 41 65 47 2 2 3 2 2 2 18772 17232 3119 16568 39901;39902;39903 46200;46201;46202 46200 3 SENGDSWK Deamidation (N) 922.36684 0.36684036 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 1 0 0 4 0 1 45.648 45.648 3 0.043526 14202 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.916 7.0517 39.564 27.124 0 0 38.702 0 37 28 0 0 37 0 1 1 0 0 1 0 1428.2 17233 3449;3451;3452 16569 39904 46203 46203 1162 1 SENGLEFTSSGSANTETTK Deamidation (N) 1959.8545 0.85452414 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 1 0 0 5 3.7 1 2 1 1 1 54.532 54.532 3 2.2844E-46 18645 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 158.5 138.66 217.02 211.21 260.84 218.85 209.9 233.04 204 214 261 214 214 223 4 5 6 6 5 5 47573 17234 978;2097 16570 39905;39906;39907;39908;39909;39910 46204;46205;46206;46207;46208;46209;46210 46205 261 7 SENGLEFTSSGSANTETTK Unmodified 1958.8705 0.87050855 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 4 0 1 52.254 52.254 3 9.2247E-28 17381 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142.63 119.3 39.701 0 28.601 68.664 35.964 77.858 37 0 28 65 37 74 1 0 1 2 1 2 7648.4 17235 978;2097 16570 39911 46211;46212 46212 2 SENLEDDTLPEGK Unmodified 1445.6522 0.65218292 129 A0A0N4SVM8;Q3TZK9;A0A0N4SV38;A0A0N4SVI8;E9QKZ7;A0A0N4SV80;E9QML5;Q61464 Zfml;Znf638 Zinc finger protein 638 yes no 0 0 0 0 3 0 1 54.134 54.134 3 9.4311E-05 18574 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.891 56.118 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17236 129 16571 39912 46213 46213 1 SENNLQEDLFDQILAGK Unmodified 1932.9429 0.94288564 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 0 5.5 0.5 1 1 89.638 89.638 3 7.9323E-05 34239 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.225 50.873 9.5993 20.216 9.6896 0 19.197 29.3 9 19 9 0 19 28 1 1 1 0 1 2 2647.7 17237 67 16572 39913;39914 46214;46215 46214 2 SEPADRPGR Unmodified 983.47846 0.4784565 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 1 3 0 1 20.095 20.095 3 0.026111 3127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.59 22.782 20.207 0 30.194 0 0 0 19 0 28 0 0 0 1 0 1 0 0 0 2250.3 17238 2483 16573 39915 46216 46216 1 SEPGQVK Unmodified 743.38137 0.38136821 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 4.5 0.5 1 1 34.144 34.144 2 0.034519 8672 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.671 23.466 137.66 52.245 82.843 75.945 77.404 78.884 129 56 83 74 74 74 2 1 1 1 1 1 120080 17239 3214 16574 39916;39917 46217;46218 46217 2 SEPIPESNEGPVK Unmodified 1381.6725 0.67252444 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 4.83 3.72 1 2 2 1 48.792 48.792 2;3;4 7.9754E-16 16115 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 138.42 103.67 305.85 200.14 372.43 252.08 479.38 298.84 287 205 361 250 474 287 5 5 6 5 5 4 76436 17240 1470 16575 39918;39919;39920;39921;39922;39923 46219;46220;46221;46222;46223;46224;46225;46226 46220 8 SEPPESEAK Unmodified 972.44001 0.4400053 74;1367;71;949 A0A0A6YY47;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 2.5 0.5 1 1 34.447 34.447 3 0.0070597 9451 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.916 37.944 20.207 0 30.194 30.079 27.906 29.848 19 0 28 28 28 28 1 0 1 1 1 1 4630.7 17241 71;74;949;1367 16576 39924;39925 46227;46228 46228 2 SEPPESEAKPAPTEVK Unmodified 1694.8363 0.8362953 74;1367;71;949 A0A0A6YY47;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 5.8 3.66 1 2 1 1 44.205 44.205 3;4 2.4481E-05 13501 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.341 51.406 217.64 83.636 372.31 311.51 468.58 483.27 204 83 356 306 467 462 4 2 4 4 4 4 52631 17242 71;74;949;1367 16577 39926;39927;39928;39929;39930 46229;46230;46231;46232;46233;46234 46230 6 SEPPVSEPLDVVGR Unmodified 1479.7569 0.75692277 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 3 0.707 1 2 1 59.91 59.91 2;3 3.9675E-21 21263 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 138.71 102.14 50.081 56.482 87.214 28.622 74.434 78.662 47 57 84 28 75 75 2 3 3 1 4 3 13754 17243 2594 16578 39931;39932;39933;39934 46235;46236;46237;46238;46239 46237 5 SEPQDFQEDSWGDTK Unmodified 1767.7224 0.72238775 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.25 4.55 2 1 1 58.328 58.328 3;4 2.0588E-11 20028 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 119.56 85.255 68.911 191.81 86.757 139.9 192.97 133.07 65 186 84 130 195 130 2 4 2 1 3 3 27701 17244 510 16579 39935;39936;39937;39938 46240;46241;46242;46243 46241 4 SEPQNLGGAAGR Unmodified 1155.5632 0.56324876 1683 P61021 Rab5b Ras-related protein Rab-5B yes yes 0 0 0 0 6.25 3.96 1 1 1 1 34.491 34.491 2 9.4993E-08 8627 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.5 83.972 20.247 47.551 184.23 72.868 0 108.54 19 47 176 74 0 103 1 2 4 3 0 4 16119 17245 1683 16580 39939;39940;39941;39942 46244;46245;46246;46247;46248 46248 5 SEPTQALELTEDDIKEDGIVPLR Unmodified 2567.2966 0.29664212 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 1 7.33 4.03 1 1 1 78.307 78.307 3;4 4.3338E-16 29342 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.718 84.404 75.614 38.006 39.987 0 48.116 0 74 37 37 0 46 0 3 1 1 0 1 0 17240 17246 2525 16581 39943;39944;39945 46249;46250;46251;46252 46250 4 SEPVKEEGSELEQPFAQATSSVGPDR Unmodified 2773.3042 0.30424669 716 S4R1M2;D3YXK2;Q80YR5 Safb;Safb2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 0 0 0 1 4 0 1 62.797 62.797 4 4.8038E-23 22246 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.346 78.233 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 0 2980.7 17247 716 16582 39946 46253 46253 1 SEQEDEVLLVSSSR Unmodified 1576.758 0.75804498 2651 Q8R2U6 Nudt4 Diphosphoinositol polyphosphate phosphohydrolase 2 yes yes 0 0 0 0 2 0 1 56.933 56.933 3 6.8245E-05 19268 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.257 53.672 0 0 14.756 8.7976 8.5057 14.681 0 0 14 9 9 14 0 0 1 1 1 1 2432.9 17248 2651 16583 39947 46254 46254 1 SEQEEELESEPGVAK Unmodified 1659.7475 0.74753987 763 D3Z316;Q9CQF4 1700021F05Rik Uncharacterized protein C6orf203 homolog yes no 0 0 0 0 1 0 1 50.696 50.696 3 2.5545E-05 15235 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.632 63.715 49.933 44.814 45.651 26.5 73.55 76.785 47 46 46 28 74 74 1 1 1 1 1 1 4860.4 17249 763 16584 39948 46255 46255 1 SEQEITALEQNVIR Unmodified 1628.837 0.836964 15 G5E8E1;E9Q9T1;A0A087WPK3 Lrrfip1 yes no 0 0 0 0 4 0 1 69.268 69.268 3 6.8844E-05 24992 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.692 53.254 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 1892.8 17250 15 16585 39949 46256 46256 1 SEQGTLTSSESHSEAIPK Unmodified 1886.8858 0.88576469 609 B7ZNS2;B1AZP2 Dlgap4 Disks large-associated protein 4 yes no 0 0 0 0 4 0 1 43.178 43.178 3 0.0017254 13035 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.383 29.224 0 29.321 28.173 8.1579 0 0 0 28 28 9 0 0 0 1 1 1 0 0 1829.2 17251 609 16587 39950 46257 46257 1 SEQLSNP Unmodified 773.35555 0.35554739 148 A0A0R4J008;P70288 Hdac2 Histone deacetylase 2 yes no 0 0 0 0 3 0 1 39.489 39.489 2 0.048867 11815 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.847 57.152 0 0 0 39.925 27.454 0 0 0 0 37 28 0 0 0 0 1 1 0 5897.9 17252 148 16588 39951 46258 46258 1 SEQSVAQLEEEKK Unmodified 1503.7417 0.74166663 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447 Klc1 Kinesin light chain 1 yes no 0 0 0 1 4 0 1 49.794 49.794 3 0.0015254 16199 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.943 45.516 88.692 72.756 0 90.719 0 0 83 74 0 83 0 0 1 1 0 1 0 0 6813.2 17253 923 16589 39952 46259 46259 1 SEREDEVLLVSSSR Unmodified 1604.8006 0.8005785 1337 P0C028;P0C027 Nudt11;Nudt10 Diphosphoinositol polyphosphate phosphohydrolase 3-beta;Diphosphoinositol polyphosphate phosphohydrolase 3-alpha yes no 0 0 0 1 3 0.816 1 1 1 47.845 47.845 3 0.00026416 15681 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.006 53.779 49.065 55.82 27.243 54.165 55.663 62.372 46 56 28 52 56 60 1 2 1 2 1 2 11533 17254 1337 16590 39953;39954;39955 46260;46261;46262 46261 3 SESEEEVLLVSSSR Unmodified 1549.7471 0.74714594 1132 I1E4X7;Q9JI46;H3BLR8;A0A338P7L3 Nudt3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes no 0 0 0 0 2 0.707 1 2 1 58.018 58.018 2;3 8.5427E-18 18531 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.7 81.558 20.178 42.685 38.453 0 51.239 23.855 19 42 38 0 51 23 1 2 2 0 2 1 23076 17255 1132 16591 39956;39957;39958;39959 46263;46264;46265;46266;46267 46263 5 SESEVEEAAAIIAQRPDNPR Unmodified 2181.0662 0.06618867 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 1 3.33 0.471 2 1 64.431 64.431 3;4 1.0126E-69 23196 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 172.03 146.16 34.997 27.755 53.332 60.893 22.073 52.67 33 28 53 59 23 50 2 2 2 2 1 2 39174 17256 3267 16592 39960;39961;39962 46268;46269;46270 46268 3 SESGVSSDR Unmodified 922.3992 0.39920312 2101 Q60989 Xiap E3 ubiquitin-protein ligase XIAP yes yes 0 0 0 0 1 0 1 21.834 21.834 2 0.0029773 3439 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.06 29.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17257 2101 16593 39963 46271 46271 1 SESGYGFNVR Unmodified 1114.5043 0.5043369 1979 Q3UHD6;A0A0G2JG07 Snx27 Sorting nexin-27 yes no 0 0 0 0 5 0 1 47.189 47.189 2 0.011 14626 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.816 49.299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17258 1979 16594 39964 46272 46272 1 SESLVVCDVAEDLVEK Acetyl (Protein N-term) 1832.8714 0.87136018 2930 Q9CQI3 Gmfb Glia maturation factor beta yes yes 1 0 0 0 2.5 1.12 1 1 1 1 95.396 95.396 3 1.672E-24 29731 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.467 46.392 37.113 42.386 91.656 42.907 50.456 38.582 35 43 89 44 51 37 3 4 6 4 3 3 28244 17259 2930 16595 39965;39966;39967;39968 46273;46274;46275;46276;46277;46278 46275 6 SESPKEPEQLR Unmodified 1298.6466 0.64664404 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 1 7.33 4.03 1 1 1 36.929 36.929 3 0.0028091 10220 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.069 38.009 167.81 183.27 134.7 86.523 157.02 69.29 158 185 139 83 158 65 2 2 2 1 2 1 40236 17260 1586 16596 39969;39970;39971 46279;46280;46281 46279 3 SESPSTR Unmodified 762.3508 0.35079637 716 S4R1M2;D3YXK2;Q80YR5 Safb;Safb2 Scaffold attachment factor B1;Scaffold attachment factor B2 yes no 0 0 0 0 2 0 1 18.517 18.517 2 0.018664 2832 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 108.92 57.468 12.876 0 0 0 19.874 0 12 0 0 0 19 0 1 0 0 0 1 0 2335.7 17261 716 16597 39972 46282 46282 1 SESTAAAEHK Unmodified 1029.4727 0.47270242 172 A0A0R4J0G0;Q8BH04;A0A2I3BS39;A0A2I3BRX1 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 8.5 4.5 1 1 27.36 27.36 3 0.0053458 5254 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.785 36.883 59.862 94.916 0 0 97.278 0 56 93 0 0 93 0 1 2 0 0 2 0 10539 17262 172 16598 39973;39974 46283;46284 46284 2 SETCTGQDLADLGDR Unmodified 1636.6999 0.69987817 994 F6SLR4;Q9ER58 Spock2 Testican-2 yes no 0 0 0 0 2.5 0.5 1 1 51.009 51.009 3 0.00027788 16621 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.467 52.039 29.817 0 38.184 38.165 0 0 28 0 37 37 0 0 1 0 1 1 0 0 1771.7 17263 994 16600 39975;39976 46285;46286 46285 2 SETDTSLIR Unmodified 1020.5088 0.50875357 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 3.5 0.5 1 1 43.016 43.016 2 0.00082805 13345 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 114.64 58.624 59.268 63.764 83.733 71.742 82.18 76.539 56 65 83 74 83 74 1 1 1 2 1 1 18169 17264 1826 16601 39977;39978 46287;46288 46287 2 SETELKDTYAR Unmodified 1311.6307 0.63065962 2697 Q8VDM4;A0A338P6S9;A0A338P7H4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 1 4 0 1 43.715 43.715 3 0.034813 13280 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.466 33.242 0 0 59.441 25.848 64.486 67.45 0 0 56 28 65 65 0 0 1 1 1 1 3942.4 17265 2697 16602 39979 46289 46289 1 SETITEEELVGLMNK Unmodified 1691.8288 0.82876708 1582 P48758;A0A1B0GRG8 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 5 0.816 1 1 1 80.631 80.631 2;3 6.1278E-05 30241 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.45 64.199 0 39.368 0 109.65 97.687 115.54 0 37 0 102 102 111 0 1 0 2 2 2 9448.7 17266 1582 16603 39980;39981;39982 46290;46291;46292 46290 3 SETLGSQFVLAK Unmodified 1278.682 0.68196691 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 8 0.816 1 1 1 66.961 66.961 3 6.4222E-13 21873 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.42 87.311 49.121 0 39.786 0 48.116 0 46 0 37 0 46 0 1 0 1 0 1 0 6007.5 17267 3192 16604 39983;39984;39985 46293;46294;46295 46294 3 SETLVNAQQTPLGTPK Unmodified 1682.8839 0.88391419 3360 Q9Z0P4;Q3UZP7 Palm Paralemmin-1 yes no 0 0 0 0 7 1 1 1 58.136 58.136 3 1.2416E-08 19311 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.418 55.651 49.358 0 0 80.882 0 49.036 46 0 0 74 0 46 1 0 0 1 0 1 2884.1 17268 3360 16605 39986;39987 46296;46297 46296 2 SETSPVAPR Unmodified 942.47706 0.47705951 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 3.5 0.5 1 1 32.306 32.306 2 0.00069752 8450 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.74 60.932 0 118.1 0 30.604 38.702 0 0 111 0 28 37 0 0 2 0 1 1 0 12410 17269 62 16606 39988;39989 46298;46299 46298 2 SEVDLER Unmodified 846.40831 0.40831125 3157 Q9DCZ1 Gmpr GMP reductase 1 yes yes 0 0 0 0 3 0 1 38.673 38.673 2 0.018664 11469 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.92 45.618 0 0 107.14 72.444 109.15 105.62 0 0 102 74 111 102 0 0 1 1 1 1 12894 17270 3157 16607 39990 46300 46300 1 SEVEENGAVEIAR Unmodified 1401.6736 0.67358707 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 1 0 1 45.854 45.854 2 0.049249 13490 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 46.352 5.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17271 1495 16608 39991 46301 46301 1 SEVEIPATVTAFVFEEDGVPVPALR Unmodified 2671.3745 0.37449851 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 5.5 0.5 1 1 98.57 98.57 3;4 3.3703E-25 35817 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.61 93.888 6.4206 0 4.9037 10.638 0 0 6 0 5 10 0 0 1 0 2 2 0 0 4397.7 17272 3275 16609 39992;39993 46302;46303 46302 2 SEVELVQLVIDGVNYLIDCER Unmodified 2462.2363 0.23629047 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 127.57 127.57 3 4.1583E-50 39462 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 159.06 138.24 8.5717 0 2.0613 5.2492 10.942 4.123 8 0 2 5 11 4 2 0 1 2 3 1 3267.1 17273 1490 16610 39994;39995;39996 46304;46305;46306;46307 46304 4 SEVIAVEESGPVYDSEDELEESR Unmodified 2567.1399 0.1398667 896 E9Q3M9 2010300C02Rik yes yes 0 0 0 0 1.5 0.5 1 1 68.21 68.21 3 3.3692E-19 22990 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.76 99.636 20.387 0 9.738 20.767 0 9.594 19 0 9 19 0 9 1 0 1 1 0 1 13996 17274 896 16611 39997;39998 46308;46309;46310 46308 3 SEVLPYGDEK Acetyl (Protein N-term) 1177.5503 0.55028404 2254 Q6QWF9 Camk2n1 Calcium/calmodulin-dependent protein kinase II inhibitor 1 yes yes 1 0 0 0 2 0 1 62.695 62.695 2 0.0092762 22133 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.864 20.733 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 3624.6 17275 2254 16612 39999 46311 46311 1 SEVPGIFCAGADLK Unmodified 1462.7126 0.71261511 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60;A0A0R4J1L8 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 6 0 1 72.032 72.032 3 9.339E-05 25796 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.279 49.722 88.219 52.013 97.061 0 66.005 57.813 83 56 93 0 65 56 1 1 1 0 1 1 8732.1 17276 150 16613 40000 46312 46312 1 SEWSDLLNDLQK Deamidation (N) 1447.6831 0.68308912 1568 P47857;A0A2R8VHV2 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 1 0 0 5 0 1 76.576 76.576 3 9.73E-05 28491 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.597 54.718 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17277 1568 16614 40001 46313 46313 598 1 SEWSDLLNDLQK Unmodified 1446.6991 0.69907354 1568 P47857;A0A2R8VHV2 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 6 0 1 84.375 84.375 3 4.5259E-15 31380 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.98 97.833 117.97 89.089 114.16 0 113.18 85.248 111 93 111 0 111 83 1 1 1 0 1 1 15916 17278 1568 16614 40002 46314 46314 1 SEYIETASGNK Unmodified 1197.5513 0.55134667 3287 Q9QZB9 Dctn5 Dynactin subunit 5 yes yes 0 0 0 0 5 0 1 46.834 46.834 2 0.0016249 14475 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.355 56.268 9.4791 0 29.896 7.8979 8.3638 20.015 9 0 28 9 9 19 1 0 1 1 1 1 1159.5 17279 3287 16615 40003 46315 46315 1 SEYQPSDAPFER Unmodified 1424.6208 0.62082322 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 5.5 4.39 1 1 1 1 49.408 49.408 2;3 7.4052E-18 16428 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 147.39 94.841 118.67 45.075 54.652 67.094 177.12 152.71 111 46 56 65 176 148 3 1 2 1 3 4 56593 17280 2295 16616 40004;40005;40006;40007 46316;46317;46318;46319 46317 4 SFASLFSD Unmodified 872.3916 0.39159855 1282;2173;2568 Q64332;Q8JZP2;O88935 Syn2;Syn3;Syn1 Synapsin-2;Synapsin-3;Synapsin-1 no no 0 0 0 0 9.4 2.06 1 1 1 1 1 85.818 85.818 2 0.00029973 30879 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 155.73 127.48 118.41 235.79 232.39 153.19 126.57 128.99 112 232 233 148 121 121 3 5 6 2 2 2 227630 17281 2173;2568;1282 16617 40008;40009;40010;40011;40012 46320;46321;46322;46323;46324;46325;46326;46327 46323 8 SFAVGMFK Unmodified 885.44186 0.44185998 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 68.782 68.782 2 0.017306 19541 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.229 47.619 89.059 0 0 0 135.98 0 83 0 0 0 130 0 1 0 0 0 1 0 5668.7 17282 577 16618 40013 46328 46328 1 SFAVGTLAESIQGLGTASAQFVSR Unmodified 2396.2336 0.23358835 2723 Q8VI75 Ipo4 Importin-4 yes yes 0 0 0 0 10 0 1 92.38 92.38 3 1.3469E-06 30052 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.359 34.495 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1448.4 17283 2723 16619 40014 46329 46329 1 SFCSMAGPNLIAIGSSESAQK Unmodified 2154.0085 0.0085391359 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 9 0 1 74.339 74.339 3 7.2833E-06 24716 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.247 39.753 0 20.216 0 49.789 26.001 29.106 0 19 0 46 28 28 0 1 0 1 1 1 3867.6 17284 2980 16620 40015 46330 46330 1 SFDAHPR Unmodified 828.38785 0.38785057 2039;917 Q58A65;Z4YMB8;A0A0R4J196;F8WH31;E9PUD1;E9Q6B6;E9Q6E0;J3QNR6;K3W4S4;Q9ESN9 Spag9;Mapk8ip3 C-Jun-amino-terminal kinase-interacting protein 4;C-Jun-amino-terminal kinase-interacting protein 3 no no 0 0 0 0 5 0 1 28.235 28.235 3 0.02982 5575 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.167 38.68 39.468 46.283 0 50.278 0 0 37 46 0 46 0 0 1 1 0 1 0 0 1769.7 17285 2039;917 16621 40016 46331 46331 1 SFDDPIVQTER Unmodified 1305.6201 0.62009493 1581 P48722;E0CY23;A0A0N4SW76 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 8.5 4.5 1 1 55.522 55.522 2 0.0045303 19032 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.107 36.729 69.198 120.36 158.89 100.96 55.964 59.696 65 120 158 102 56 56 1 2 2 2 1 1 22707 17286 1581 16622 40017;40018 46332;46333 46332 2 SFDDSGSGYCR Unmodified 1249.467 0.46696511 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 4.5 0.5 1 1 41.155 41.155 2 5.3134E-05 12076 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.013 89.008 9.4791 39.368 29.896 17.741 8.0337 29.619 9 37 28 18 9 28 1 1 1 2 1 1 4939.8 17287 1412 16623 40019;40020 46334;46335 46334 2 SFDLLVK Unmodified 820.46945 0.46945494 2990 Q9CXW3;A0A0A6YY29 Cacybp Calcyclin-binding protein yes no 0 0 0 0 9 0 1 70.613 70.613 2 0.038991 22902 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.469 19.318 0 85.966 140.33 110.22 145.56 0 0 83 139 111 144 0 0 1 1 1 1 0 17031 17288 2990 16624 40021 46336 46336 1 SFDQLTPEESKER Unmodified 1564.7369 0.73691561 1060 G3UY49;G3UWV3;G3UWR0;Q6XLQ8;O35887 Calu Calumenin yes no 0 0 0 1 5 0 1 49.374 49.374 3 0.0016916 15677 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.485 27.267 0 39.368 0 50.278 0 0 0 37 0 46 0 0 0 1 0 1 0 0 2979.5 17289 1060 16625 40022 46337 46337 1 SFEALLADLTR Unmodified 1234.6558 0.65575216 102 A0A0G2JGQ6;Q9JLM8;Q80VB6;A0A0G2JGR9 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 8.5 0.5 1 1 91.133 91.133 2 0.0020836 32269 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.721 38.299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2331.3 17290 102 16626 40023;40024 46338;46339 46339 2 SFENISK Unmodified 823.40758 0.40758296 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 7 0.707 1 2 1 50.338 50.338 2;3 0.015972 14622 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.915 13.239 227.46 214.77 244.22 178.16 228.6 339.7 213 212 241 176 232 324 2 3 3 2 3 3 31003 17291 1684 16627 40025;40026;40027;40028 46340;46341;46342;46343 46342 4 SFENNWK Unmodified 923.41373 0.41373097 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 7.5 0.5 1 1 54.057 54.057 2;3 0.0073831 16415 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.18 29.301 0 88.312 0 69.827 64.782 0 0 83 0 65 65 0 0 1 0 1 1 0 4835.3 17292 1357 16628 40029;40030 46344;46345 46344 2 SFENSLGINVPR Unmodified 1331.6834 0.68336389 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 10.5 2.5 1 1 63.881 63.881 2 0.0084329 22978 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.098 30.844 20.099 77.801 104.36 78.245 44.814 48.823 19 74 102 75 46 47 1 1 2 2 1 2 9562.8 17293 2783 16629 40031;40032 46346;46347;46348 46348 3 SFESTVGQGSDTYSYIFR Unmodified 2042.9222 0.92215019 1448 P24668 M6pr Cation-dependent mannose-6-phosphate receptor yes yes 0 0 0 0 6 0 1 73.428 73.428 3 0.00083492 26425 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.376 28.008 29.635 36.74 37.68 0 0 20.254 28 37 37 0 0 19 1 1 1 0 0 1 3500.6 17294 1448 16630 40033 46349 46349 1 SFEVEEIEPPNSTPPR Unmodified 1826.8687 0.86865806 431 A2A6U3;Q80UG5 Sept9 Septin-9 yes no 0 0 0 0 3 0 1 62.358 62.358 3 0.0064497 22481 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 42.338 22.499 39.701 20.216 0 30.604 0 50.102 37 19 0 28 0 47 1 1 0 1 0 2 2638 17295 431 16631 40034 46350;46351 46351 2 SFEWLSQMR Unmodified 1182.5492 0.5491786 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 72.168 72.168 2 0.047745 23676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.432 31.509 79.032 73.407 0 0 83.165 106.36 74 74 0 0 83 102 1 1 0 0 1 1 6067 17296 3204 16632 40035 46352 46352 1 SFFNAQFGSLFR Unmodified 1419.6935 0.69353465 1977 Q3UHB1 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes yes 0 0 0 0 4.67 5.19 2 1 85.129 85.129 2 2.7029E-13 23686 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.5 94.199 49.176 36.052 18.367 49.183 0 69.29 46 37 19 46 0 65 1 1 1 1 0 1 30548 17297 1977 16633 40036;40037;40038 46353;46354;46355 46355 3 SFFNCLWK Unmodified 1100.5113 0.51133653 2535 Q8CGA0 Ppm1f Protein phosphatase 1F yes yes 0 0 0 0 12 0 1 79.158 79.158 3 0.0066145 21417 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.223 43.481 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17298 2535 16634 40039 46356 46356 1 SFFSEIISSISDVK Unmodified 1557.7926 0.79263957 2211 Q6P1F6;Q9CWU3;Q6ZWR4;Q925E7;F6RV17 Ppp2r2a;Ppp2r2b;Ppp2r2d Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform yes no 0 0 0 0 11 1.41 1 1 1 1 1 100.26 100.26 3 2.5127E-11 32620 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.88 98.821 20.387 50.584 29.216 94.251 68.296 0 19 48 31 89 69 0 1 2 1 4 3 0 47108 17299 2211 16635 40040;40041;40042;40043;40044 46357;46358;46359;46360;46361;46362 46358 6 SFFSFAK Unmodified 832.41194 0.41194006 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 6.5 5.5 1 1 71.685 71.685 2 0.013048 18266 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 116.54 47.153 39.564 27.124 0 93.357 526.4 202.44 37 28 0 93 514 204 1 1 0 1 2 2 60688 17300 2300 16636 40045;40046 46363;46364 46364 2 SFFTSQQL Unmodified 956.46035 0.46034682 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 13 0 1 73.697 73.697 2 0.041748 27794 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.993 49.008 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 4502.1 17301 1433 16637 40047 46365 46365 1 SFGGGTGSGFTSLLMER Unmodified 1702.7985 0.79847001 2013 Q3UX10 Tubal3 Tubulin alpha chain-like 3 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 75.766 75.766 2;3 2.0125E-08 26002 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.18 87.802 88.266 114.45 114.84 18.31 74.549 207.89 83 112 112 19 74 196 2 3 3 1 2 3 36506 17302 2013 16638 40048;40049;40050;40051 46366;46367;46368;46369 46367 4 SFGLPSIGR Unmodified 932.50797 0.50796571 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 10 0 1 63.297 63.297 2 0.0173 17421 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.464 36.96 88.072 71.031 105.66 0 122.24 95.65 83 74 102 0 120 93 1 1 1 0 1 1 7744.1 17303 2782 16639 40052 46370 46370 1 SFGSEHYLCSASSYR Acetyl (Protein N-term) 1791.7522 0.75224809 1557 P46660 Ina Alpha-internexin yes yes 1 0 0 0 4.5 0.5 1 1 54.896 54.896 2 1.9996E-41 18601 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.4 87.25 0 0 0 30.079 27.906 0 0 0 0 28 28 0 0 0 0 1 1 0 12695 17304 1557 16640 40053;40054 46371;46372 46371 2 SFGTTISPWVVPMDALMPFVVPNPK Unmodified 2729.3961 0.39610235 1521 P35505 Fah Fumarylacetoacetase yes yes 0 0 0 0 11 0 1 110.38 110.38 4 0.020129 35863 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 30.592 16.577 6.438 0 0 0 0 12.792 6 0 0 0 0 12 1 0 0 0 0 1 1088.6 17305 1521 16641 40055 46373 46373 1 SFHGILK Unmodified 800.45447 0.45447358 2042 Q5DTT2 Psd PH and SEC7 domain-containing protein 1 yes yes 0 0 0 0 10 0 1 48.906 48.906 3 0.010186 11261 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.035 29.664 0 88.312 0 80.882 0 69.29 0 83 0 74 0 65 0 1 0 1 0 1 4979.9 17306 2042 16642 40056 46374 46374 1 SFHNELLTQLEQK Unmodified 1585.81 0.81002097 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 8 0 2 65.472 65.472 3;4 0.0024068 21180 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.038 32.085 168.01 154.7 124.79 104.64 158.1 38.375 158 158 129 102 157 37 2 2 2 1 2 1 10531 17307 607 16643 40057;40058 46375;46376 46375 2 SFHQLVALLHCR Unmodified 1479.7769 0.77688712 3058 Q9D3A9;A0A0U1RPU8 Ttyh1 Protein tweety homolog 1 yes no 0 0 0 0 12 0 1 62.337 62.337 4 1.7361E-05 15060 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.839 80.486 0 39.086 16.894 29.597 0 0 0 37 19 28 0 0 0 1 1 1 0 0 4736.5 17308 3058 16644 40059 46377 46377 1 SFKPDFGAESIYGGFLLGVR Unmodified 2159.1051 0.10514036 1230 O55029 Copb2 Coatomer subunit beta' yes yes 0 0 0 1 10 0 1 86.23 86.23 3 2.7116E-06 27648 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.438 46.496 30.044 0 0 0 37.384 38.375 28 0 0 0 37 37 1 0 0 0 1 1 1760.3 17309 1230 16646 40060 46378 46378 1 SFLALDWDPDLK Unmodified 1418.7082 0.70818166 2673 Q8R5H1 Usp15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 0 9 0 1 88.446 88.446 3 0.021973 31187 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.095 7.717 0 48.188 45.237 36.896 45.111 38.155 0 46 46 37 46 37 0 1 1 1 1 1 1150.1 17310 2673 16647 40061 46379 46379 1 SFLAMVVDIVR Unmodified 1248.69 0.69002918 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 11.5 0.5 1 1 97.368 97.368 2;3 6.4193E-08 27908 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.52 70.453 14.925 19.21 53.767 52.005 28.359 0 14 19 51 51 28 0 1 1 1 2 1 0 7499.7 17311 2587 16648 40062;40063 46380;46381;46382 46382 3 SFLEEVLASGLHSR Unmodified 1543.7995 0.79945628 1849 P97390 Vps45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 0 9 0.816 1 1 1 79.027 79.027 3 0.0010059 24597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.55 44.296 59.996 18.196 19.278 38.569 38.428 50.102 56 19 19 37 38 47 2 1 1 2 1 2 10816 17312 1849 16649 40064;40065;40066 46383;46384;46385 46385 3 SFLEFAEDVIQVPR Unmodified 1648.8461 0.84607213 783 E9QAS9;E9QAT0;D3Z6U8;E9QNF5;Q6AXB7;E9QAS8;P35922 Fmr1 Fragile X mental retardation protein 1 homolog yes no 0 0 0 0 7 0 1 95.987 95.987 3 0.00010731 35352 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.345 36.847 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17313 783 16650 40067 46386 46386 1 SFLEVLDGK Unmodified 1006.5335 0.53351176 3262 Q9QWW1;E9Q4F9 Homer2 Homer protein homolog 2 yes no 0 0 0 0 8 0 1 78.752 78.752 3 0.0032724 27390 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.016 34.638 39.042 65.604 55.242 27.312 0 20.254 37 65 56 28 0 19 1 1 1 1 0 1 2155.5 17314 3262 16651 40068 46387 46387 1 SFLGGDSPSMVDYLTWPWFQR Unmodified 2488.1522 0.15216691 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 0 10.5 0.5 1 1 105.98 105.98 3 1.2132E-08 34950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.872 62.708 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1982.1 17315 1176 16652 40069;40070 46388;46389 46389 2 SFLIWVNEEDHTR Unmodified 1644.7896 0.78961988 1490 P30275 Ckmt1 Creatine kinase U-type, mitochondrial yes yes 0 0 0 0 8.5 1.12 1 1 1 1 70.059 70.059 2;3 8.3287E-41 24075 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 190.37 161.07 137.63 182.95 305.01 80.546 233.35 163.71 130 185 296 84 232 158 2 3 4 2 4 3 84453 17316 1490 16653 40071;40072;40073;40074 46390;46391;46392;46393 46390 4 SFLKPGEK Unmodified 904.50182 0.5018177 2658 Q8R326 Pspc1 Paraspeckle component 1 yes yes 0 0 0 1 10 0 1 48.469 48.469 3 0.041392 11111 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.597 13.879 218.84 182.74 215.13 146.25 143.19 264.55 206 189 216 148 152 252 1 1 1 1 1 1 20438 17317 2658 16654 40075 46394 46394 1 SFLLDLLNATGK Unmodified 1290.7184 0.71835242 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 6.5 5.53 3 1 1 1 96.578 96.578 2;3 1.9349E-06 27328 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.88 73.008 26.557 60.447 76.692 70.975 23.922 103.6 25 60 77 68 24 99 2 5 4 3 2 5 20755 17318 2146 16655 40076;40077;40078;40079;40080;40081 46395;46396;46397;46398;46399;46400;46401;46402 46400 8 SFLMTPAKPAVTQR Unmodified 1545.8337 0.8337333 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 1 8 4.97 1 1 1 57.123 57.123 3 2.6615E-16 13001 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 127.07 100.32 72.453 29.173 181.34 156.6 48.341 157.45 68 28 176 154 53 149 1 1 3 3 1 2 23780 17319 896 16656 40082;40083;40084 46403;46404;46405 46405 3 SFLPLLR Unmodified 844.51707 0.51707383 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 0 8 4.97 1 1 1 73.948 73.948 2 0.0054656 19305 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.5 54.402 205.83 569.56 749.87 611.21 692.1 145.87 194 557 748 612 689 139 3 3 3 4 3 2 255930 17320 2336 16657 40085;40086;40087 46406;46407;46408;46409 46409 4 SFLSPNQILK Deamidation (N) 1146.6285 0.62847478 3110 Q9DB20;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 1 0 0 8 0 1 71.672 71.672 3 0.028519 24083 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.292 16.426 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17321 3110 16658 40088 46410 46410 1079 1 SFLSPNQILK Unmodified 1145.6445 0.64445919 3110 Q9DB20;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 10.8 1.34 1 2 1 1 1 70.762 70.762 2;3 4.9675E-08 20404 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 143.03 92.427 789.27 434.84 790.87 589.68 841.89 946.15 742 454 783 576 849 899 5 4 5 4 3 5 417980 17322 3110 16658 40089;40090;40091;40092;40093;40094 46411;46412;46413;46414;46415;46416 46414 6 SFLTTYQVLALPIPK Unmodified 1689.9705 0.97054436 933 E9Q8J9;O54929 Wsb2 WD repeat and SOCS box-containing protein 2 yes no 0 0 0 0 1 0 1 92.284 92.284 3 0.0049229 32686 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.207 33.414 9.657 0 0 9.837 0 0 9 0 0 9 0 0 1 0 0 1 0 0 674.8 17323 933 16659 40095 46417 46417 1 SFLVSYIANK Unmodified 1140.6179 0.61791009 751 D3Z158;Q8BML9;A0A140LHJ3;A0A140LJK5;A0A140LHB3;A0A140LIS6;A0A140LHZ5 Qars yes no 0 0 0 0 1 0 2 74.964 74.964 2;3 8.3405E-05 25763 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.52 62.274 59.858 25.469 17.138 49.257 0 0 56 28 19 46 0 0 2 2 1 1 0 0 4460 17324 751 16660 40096;40097 46418;46419 46418 2 SFLYEIVSNK Unmodified 1198.6234 0.6233894 1001 Q60710;F6TVP2;E9PYG9 Samhd1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 0 10 0 1 78.742 78.742 3 0.0056755 24436 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.223 32.104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17325 1001 16661 40098 46420 46420 1 SFLYSHFK Unmodified 1027.5127 0.51271674 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 11 0.816 1 1 1 56.354 56.354 3 0.0017531 13975 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.54 60.094 69.221 103.86 0 79.176 185.35 162.07 65 102 0 74 186 157 1 1 0 1 2 2 40225 17326 1446 16662 40099;40100;40101 46421;46422;46423 46422 3 SFMALSQDIQK Unmodified 1266.6278 0.62782285 2093 Q60865 Caprin1 Caprin-1 yes yes 0 0 0 0 9 0 1 69.004 69.004 3 0.049707 22256 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.968 18.181 0 0 44.991 107.33 78.56 96.896 0 0 46 102 83 93 0 0 1 1 1 1 12646 17327 2093 16663 40102 46424 46424 1 SFMNNWEVYK Unmodified 1316.586 0.58595803 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 10.5 2.5 1 1 71.91 71.91 2 0.0027199 24262 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.687 46.411 39.262 45.712 34.991 93.201 52.725 107.23 37 46 37 92 56 102 1 1 1 2 1 1 7417.3 17328 1568 16664 40103;40104 46425;46426 46425 2 SFNAGGHK Unmodified 816.38785 0.38785057 2096 Q60930;G3UX26 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 9.4 1.85 1 1 1 1 1 32.234 32.234 2;3 0.002805 4452 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.67 46.878 247.18 269.51 320.69 398.84 93.305 100.74 232 274 321 384 97 97 1 4 3 4 2 2 54050 17329 2096 16665 40105;40106;40107;40108;40109 46427;46428;46429;46430;46431 46431 5 SFPAYYTSHVQEEQTEVEETIEATK Unmodified 2915.3349 0.33487812 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 5 0.816 1 1 1 76.597 76.597 4 1.7355E-34 28406 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.98 109.93 228.76 53.875 155.1 39.562 121.83 145.24 214 56 150 38 122 139 5 2 4 2 4 4 46863 17330 1329 16666 40110;40111;40112 46432;46433;46434;46435;46436;46437 46432 6 SFPDFPIPGVLFR Unmodified 1490.7922 0.79218606 1323 P08030;A0A1D5RLR6 Aprt Adenine phosphoribosyltransferase yes no 0 0 0 0 10 0.816 1 1 1 94.244 94.244 2;3 0.00034648 30809 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.363 59.211 0 0 28 23 19.197 19.706 0 0 28 23 19 19 0 0 1 1 1 1 8785.2 17331 1323 16667 40113;40114;40115 46438;46439;46440;46441;46442 46441 5 SFPDIVYK Unmodified 967.50148 0.50148335 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 8 0.816 1 1 1 67.212 67.212 2 0.01063 22690 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.711 34.713 138.75 88.312 124.94 118.6 369.26 84.254 130 83 121 120 361 83 2 1 2 2 3 1 31895 17332 3172 16668 40116;40117;40118 46443;46444;46445 46443 3 SFPIEQSSHPVR Unmodified 1382.6943 0.69426293 2726 Q91V09;S4R225 Wdr13 WD repeat-containing protein 13 yes no 0 0 0 0 6 0 1 42.327 42.327 3 0.0039954 11744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.871 22.808 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17333 2726 16669 40119 46446 46446 1 SFPNPFPDYEAAASAAGLAAGSAEETGR Unmodified 2753.2569 0.25690257 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 0 0 0 8 3.56 1 1 1 84.818 84.818 3;4 5.7772E-09 32326 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.79 48.235 0 20.073 8.5336 0 19 40.508 0 19 9 0 19 38 0 1 1 0 1 1 4738.9 17334 985 16670 40120;40121;40122 46447;46448;46449 46447 3 SFPPDAILFYIPQIVQALR Unmodified 2187.2092 0.2092115 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 11.5 0.5 1 1 115.62 115.62 3 4.8545E-07 30954 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.697 58.07 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 2870.4 17335 240 16671 40123;40124 46450;46451 46451 2 SFPSSHGLTTTR Unmodified 1289.6364 0.6364137 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 7.5 0.5 1 1 39.366 39.366 3 0.0052423 9546 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.914 32.807 187.83 84.621 99.638 105.55 0 148.17 176 93 102 102 0 139 1 1 1 1 0 1 3867.7 17336 573 16672 40125;40126 46452;46453 46452 2 SFQQSSLGR Unmodified 1008.4989 0.49885759 2602 Q8K310;A0A087WSU2;A0A087WQD6;A0A087WNP3;A0A087WPU5;A0A087WPQ5;A0A087WQP4 Matr3;Gm28285 Matrin-3 yes no 0 0 0 0 10.5 2.5 1 1 40.348 40.348 2 0.0010619 11446 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.263 43.427 78.806 53.352 54.928 46.367 33.896 77.917 74 56 56 46 37 74 1 1 1 1 1 1 6623 17337 2602 16673 40127;40128 46454;46455 46455 2 SFRPDFVLIR Unmodified 1248.6979 0.69789175 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 10.8 1.48 1 1 1 1 64.747 64.747 3 1.939E-05 18064 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.8 80.98 1239 1220.3 1229.6 1040.2 1568.9 1017 1166 1232 1221 1020 1579 981 4 5 3 5 6 4 1194800 17338 2173 16674 40129;40130;40131;40132 46456;46457;46458;46459;46460;46461 46458 6 SFSSSADEHS Unmodified 1052.4047 0.40468243 2690 Q8VD33 Sgtb Small glutamine-rich tetratricopeptide repeat-containing protein beta yes yes 0 0 0 0 3 0 1 32.973 32.973 2 0.0031737 8743 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.716 77.237 0 0 0 29.02 84.213 37.039 0 0 0 28 83 37 0 0 0 1 1 1 3378.6 17339 2690 16675 40133 46462 46462 1 SFSTALYGESDL Unmodified 1288.5823 0.58231244 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 5.5 0.5 1 1 77.566 77.566 2 9.4467E-06 28362 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.01 75.907 20.387 20.216 0 20.234 68.107 0 19 19 0 19 66 0 1 1 0 1 2 0 8579.3 17340 310 16676 40134;40135 46463;46464 46464 2 SFTAEEDIVK Unmodified 1137.5554 0.55536941 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 4.5 0.5 1 1 59.57 59.57 2;3 0.000109 20854 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.7 56.126 137.69 91.59 45.148 157.69 73.756 186.58 129 93 46 148 74 177 3 2 1 3 1 3 7478.9 17341 3249 16677 40136;40137 46465;46466;46467 46466 3 SFTHVSINK Unmodified 1031.54 0.53999412 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8 0 1 47.139 47.139 3 0.0018522 12554 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.1 40.831 127.37 76.917 167.88 169.68 151.51 173.7 120 83 167 167 158 167 1 1 1 1 1 1 4220 17342 3210 16678 40138 46468 46468 1 SFTPVFLGSALK Unmodified 1265.702 0.70197407 2579 Q8K0D5 Gfm1 Elongation factor G, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 79.968 79.968 2 2.3605E-17 24666 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 133.89 89.544 30.044 0 0 0 29.288 0 28 0 0 0 28 0 1 0 0 0 1 0 2515.6 17343 2579 16679 40139;40140 46469;46470 46469 2 SFTSSCPVSAFVPK Unmodified 1512.7283 0.72826518 2631 Q8R0F8 Fahd1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 0 9 0 1 69.065 69.065 3 0.0010277 22174 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.345 40.249 118.25 0 143.95 131.44 110.07 0 111 0 139 130 111 0 1 0 1 1 1 0 11134 17344 2631 16680 40141 46471 46471 1 SFVDQYGQR Unmodified 1098.5094 0.50942227 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 6 0 1 46.989 46.989 2 0.0030155 13927 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.2 62.895 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17345 1359 16681 40142 46472 46472 1 SFVGEPPR Unmodified 887.45012 0.45011648 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 6 0 1 43.772 43.772 2 0.013678 12417 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.794 9.2983 178.16 0 172.67 159.98 128.63 0 167 0 167 158 130 0 1 0 1 1 1 0 16068 17346 2077 16682 40143 46473 46473 1 SFVLNLGK Unmodified 876.5069 0.50690308 1387 P16045 Lgals1 Galectin-1 yes yes 0 0 0 0 9.4 4.22 1 2 2 69.468 69.468 2;3 0.0028547 17557 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.212 43.103 149.38 133.87 601.5 170.08 135.39 58.31 140 134 598 158 134 56 3 2 3 3 2 1 74694 17347 1387 16683 40144;40145;40146;40147;40148 46474;46475;46476;46477;46478 46478 5 SFVQGLGVASDVVR Unmodified 1432.7674 0.76742787 3293 Q9QZF2 Gpc1 Glypican-1;Secreted glypican-1 yes yes 0 0 0 0 8 0 1 69.566 69.566 2 2.5989E-08 23138 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.699 34.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17348 3293 16684 40149 46479 46479 1 SFVQNYPVVSIEDPFDQDDWGAWQK Unmodified 2969.3508 0.35080295 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 7.45 2.15 2 2 2 3 1 1 96.044 96.044 3;4;5 4.2892E-23 36376 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.059 84.382 380.39 336.07 385.13 259.78 233.84 402.91 360 337 373 250 238 383 14 11 14 10 8 16 339530 17349 1398 16685 40150;40151;40152;40153;40154;40155;40156;40157;40158;40159;40160 46480;46481;46482;46483;46484;46485;46486;46487;46488;46489;46490;46491;46492;46493;46494;46495;46496;46497;46498;46499;46500 46484 21 SFVQWLGCR Unmodified 1151.5546 0.55459833 3176 Q9EQQ9 Mgea5 Protein O-GlcNAcase yes yes 0 0 0 0 12 0 1 71.786 71.786 2 0.028797 18491 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.597 22.503 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17350 3176 16686 40161 46501 46501 1 SFVTWLR Unmodified 907.49159 0.49158736 2350 Q80ZX0 Sec24b yes yes 0 0 0 0 11.5 0.5 1 1 70.565 70.565 2 0.027422 20294 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.407 39.882 60.088 29.792 0 121.32 0 99.138 56 28 0 111 0 93 1 1 0 2 0 1 16435 17351 2350 16687 40162;40163 46502;46503 46502 2 SFWGPLELVEK Unmodified 1303.6812 0.68123863 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 10.4 2.24 2 1 2 87.898 87.898 2;3 6.2406E-08 34565 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.28 77.249 80.12 143.4 57.591 0 97.278 69.29 75 139 56 0 93 65 3 4 2 0 2 2 17509 17352 3056 16688 40164;40165;40166;40167;40168 46504;46505;46506;46507;46508;46509 46508 6 SFYGTALFLCR Unmodified 1333.6489 0.64889264 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 11.5 0.5 1 1 75.731 75.731 2 1.7135E-05 22530 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 104.42 83.272 0 97.978 58.288 61.208 76.145 67.117 0 93 56 56 75 65 0 2 1 1 1 1 23591 17353 1412 16689 40169;40170 46510;46511 46510 2 SFYPEEVSSMVLTK Unmodified 1615.7804 0.78036033 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 8.17 2.41 2 1 1 1 1 78.884 78.884 2;3 4.2731E-22 27530 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.82 109 975.87 774.77 583.71 919.21 891.94 1006.4 915 797 585 885 917 968 8 9 6 8 6 7 248080 17354 1762 16690 40171;40172;40173;40174;40175;40176 46512;46513;46514;46515;46516;46517;46518;46519;46520;46521 46518 10 SFYPEEVSSMVLTK Oxidation (M) 1631.7753 0.77527495 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 1 0 7 0 1 70.881 70.881 3 0.018305 24478 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.33 12.628 48.834 25.387 66.552 45.09 64.957 27.994 46 28 65 46 65 28 1 1 1 1 1 1 27794 17355 1762 16690 40177 46522 46522 136 1 SFYPTPGPWPK Unmodified 1275.6288 0.62880913 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 10 1 1 1 69.397 69.397 3 0.002418 19769 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.542 42.766 39.148 55.107 75.278 28.875 0 49.036 37 55 74 28 0 46 1 1 2 1 0 1 8514.1 17356 2208 16691 40178;40179 46523;46524 46524 2 SGAFGHLFRPDNFIFGQSGAGNNWAK Unmodified 2794.3364 0.33643071 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 0 1 11 0.756 2 3 2 78.675 78.675 3;4;5 1.4915E-34 21164 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 130.3 112.51 752.6 384.41 702.16 356.5 838.91 773.39 714 381 664 333 840 746 7 6 7 5 7 5 117470 17357 3183 16692 40180;40181;40182;40183;40184;40185;40186 46525;46526;46527;46528;46529;46530;46531;46532;46533;46534;46535;46536 46535 12 SGAFGHLFRPDNFIFGQSGAGNNWAK Deamidation (N) 2795.3204 0.3204463 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 1 0 1 10.5 0.5 1 1 79.784 79.784 4 4.5769E-23 25290 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.29 87.485 167.18 127.3 224.92 205.24 295.12 144.52 157 126 218 199 291 140 3 3 4 4 4 3 34712 17358 3183 16692 40187;40188 46537;46538;46539;46540;46541 46538 1100;1101 5 SGAILPKPVK Unmodified 1008.6332 0.63316622 3107 Q9DB10 Smdt1 Essential MCU regulator, mitochondrial yes yes 0 0 0 1 10.5 0.5 1 1 51.15 51.15 3 0.022326 12043 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.426 31.439 138.77 0 121.34 216.83 232.85 148.16 130 0 117 209 237 142 1 0 1 2 2 1 21440 17359 3107 16693 40189;40190 46542;46543 46543 2 SGALDVLQMK Acetyl (Protein N-term) 1102.5692 0.56924534 1374 P14206;A0A1L1SUK3 Rpsa 40S ribosomal protein SA yes no 1 0 0 0 6 0 1 81.247 81.247 2 0.00016236 30024 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.8 52.419 0 29.343 26.836 38.147 36.95 0 0 28 28 37 37 0 0 1 1 1 1 0 2636.4 17360 1374 16694 40191 46544 46544 1 SGALDVLQMKEEDVLK Acetyl (Protein N-term) 1815.9288 0.92881548 1374 P14206;A0A1L1SUK3 Rpsa 40S ribosomal protein SA yes no 1 0 0 1 9.5 3.5 1 1 85.076 85.076 3 8.0834E-06 33286 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 44.567 25.735 20.244 87.238 46.243 20.767 48.116 0 19 84 46 19 46 0 1 2 1 1 1 0 8949.4 17361 1374 16695 40192;40193 46545;46546 46546 2 SGAPLTPGR Unmodified 854.46102 0.46101552 3116 Q9DB75;F6X7Q6 Cdip1 Cell death-inducing p53-target protein 1 yes no 0 0 0 0 6 0 1 35.326 35.326 2 0.038307 8396 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.426 30.111 29.552 57.017 34.361 47.213 54.081 67.747 28 56 37 46 56 65 1 1 1 1 1 1 6815.8 17362 3116 16696 40194 46547 46547 1 SGAPPSYSFVALPPR Acetyl (Protein N-term) 1586.8093 0.80929269 3001 Q9CZC8;D3YXW0 Scrn1 Secernin-1 yes no 1 0 0 0 6 0 1 75.483 75.483 2 0.00013185 27365 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.655 65.586 29.841 37.818 35.972 36.879 75.417 8.5359 28 38 37 37 74 9 1 2 2 2 2 1 4156.4 17363 3001 16697 40195 46548;46549 46549 2 SGAPSVLPH Unmodified 863.45012 0.45011648 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 7.4 3.26 1 1 1 1 1 45.201 45.201 2;3 0.0019774 13814 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.068 74.138 384.7 284.13 530.06 308.66 226.25 428.47 362 287 519 306 231 408 4 4 5 4 2 3 208850 17364 1355 16698 40196;40197;40198;40199;40200 46550;46551;46552;46553;46554;46555 46552 6 SGAPTAGPGSR Unmodified 956.46756 0.46755746 1824 P80315;G5E839;G3UYW5;G3UXF3;G3UXG2 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 5 0.816 1 1 1 26.34 26.34 2 2.295E-08 4793 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.85 77.596 34.218 72.552 71.472 40.075 135.77 104.86 32 69 70 42 135 102 1 2 2 2 3 3 19432 17365 1824 16699 40201;40202;40203 46556;46557;46558 46557 3 SGAQASSTPLSPTR Unmodified 1358.679 0.6790068 1580 P48678;D3YUF7 Lmna Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 5.5 0.5 1 1 37.245 37.245 2 0.00036425 9374 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.877 45.134 0 29.659 7.9585 30.604 19.874 29.848 0 28 9 28 19 28 0 1 1 1 1 1 4070.1 17366 1580 16700 40204;40205 46559;46560 46560 2 SGATGGLSGGESR Unmodified 1134.5265 0.5265289 2987 Q9CXS4 Cenpv Centromere protein V yes yes 0 0 0 0 4.5 0.5 1 1 30.068 30.068 2 8.6481E-18 6509 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.39 76.426 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 5007.4 17367 2987 16701 40206;40207 46561;46562 46562 2 SGAWFFK Unmodified 841.41227 0.41227441 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 11.5 0.5 1 1 70.204 70.204 2 0.010125 20204 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.78 63.571 114.38 653 511.29 534.61 121.58 114.86 107 629 526 517 120 111 1 2 1 1 1 1 70257 17368 1561 16702 40208;40209 46563;46564 46563 2 SGAYLIPLLER Unmodified 1230.6972 0.69722304 1624 P54823 Ddx6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 0 8 0 1 77.206 77.206 2 0.0038344 26722 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.721 35.643 48.777 34.942 67.988 0 48.116 0 46 37 65 0 46 0 1 1 1 0 1 0 3878.6 17369 1624 16703 40210 46565 46565 1 SGAYVALTLLGSSPSSIGVSGLQQNPSLSGGPR Unmodified 3156.6415 0.64150566 872 E9Q0A3;Q68FM7;D6RGQ8;A0A1D5RLI4 Arhgef11 yes no 0 0 0 0 6.5 5.5 1 1 88.258 88.258 4 0.0085406 31546 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 27.547 16.839 33.965 0 18.663 0 9.414 0 33 0 18 0 9 0 2 0 2 0 1 0 2296.6 17370 872 16704 40211;40212 46566;46567;46568 46566 3 SGCFYQK Unmodified 888.37999 0.379988 3051 Q9D2P8 Mobp Myelin-associated oligodendrocyte basic protein yes yes 0 0 0 0 8.5 0.5 1 1 45.199 45.199 2 0.027111 11655 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.041 55.161 87.76 150.03 159.97 34.541 310.16 181.5 83 148 158 37 304 176 1 1 2 1 2 1 13841 17371 3051 16705 40213;40214 46569;46570 46569 2 SGDAPITVQQLGTAYVSATTGAVATALGLK Unmodified 2860.5182 0.51820263 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 8.17 5.11 2 2 1 1 106.45 106.45 3;4 2.5813E-26 29348 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.944 70.213 48.077 55.315 110.77 84.062 36.442 66.99 45 54 108 81 37 65 3 5 5 5 3 5 61726 17372 2730 16706 40215;40216;40217;40218;40219;40220 46571;46572;46573;46574;46575;46576;46577;46578;46579 46577 9 SGDAPLTVNELGTAYVSATTGAVATALGLNALTK Unmodified 3246.6984 0.69835184 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 10 0.816 1 1 1 109.28 109.28 4 1.25E-14 34024 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 63.008 52.204 15.022 0 16.574 0 7.146 22.182 14 0 16 0 7 21 1 0 2 0 1 3 9362.2 17373 2832 16707 40221;40222;40223 46580;46581;46582;46583;46584 46581 5 SGDATFPK Unmodified 821.39193 0.3919329 765;1103;2192 D3Z396;Q8BG33;Q99PJ0;G5E8G3;Q6DFY2 Ntm;Opcml Neurotrimin no no 0 0 0 0 8.67 3.09 1 1 1 45.585 45.585 2 0.014811 12554 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.743 39.431 118.66 53.06 375.59 276.44 267.52 307.9 112 56 362 278 278 296 2 1 3 3 3 3 32241 17374 765;1103;2192 16708 40224;40225;40226 46585;46586;46587 46586 3 SGDETPGSEAPGDK Unmodified 1345.5634 0.56336792 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 1.5 0.5 1 1 37.589 37.589 2;3 0.00048561 10105 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.215 41.424 20.27 0 28.955 27.811 56.755 58.076 19 0 28 28 56 56 1 0 2 2 1 2 4439 17375 1873 16709 40227;40228 46588;46589 46588 2 SGDGESTPVEHVR Unmodified 1368.627 0.62697123 2282 Q7TMB8;A0A0R4J119 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 2.5 0.5 1 1 29.836 29.836 3 5.2618E-05 7066 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 96.23 80.658 110.28 35.328 9.5868 30.256 55.538 47.979 103 37 9 28 56 46 3 1 1 1 2 1 9660.5 17376 2282 16710 40229;40230 46590;46591;46592 46590 3 SGDGGSAGPAGK Unmodified 959.43084 0.4308376 6 A0A087WNP6;Q4VAA2;A0A087WRM0 Cdv3 Protein CDV3 yes no 0 0 0 0 4 0 1 31.287 31.287 2 0.00019368 7509 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.681 46.572 15.022 0 0 0 0 14.924 14 0 0 0 0 14 1 0 0 0 0 1 1469 17377 6 16711 40231 46593 46593 1 SGDGGSLGSGSR Unmodified 1035.4581 0.45811498 6 A0A087WNP6;Q4VAA2 Cdv3 Protein CDV3 yes no 0 0 0 0 3.5 0.5 1 1 25.86 25.86 2 2.4199E-14 5037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 134.57 109.67 39.469 0 68.299 41.135 37.265 18.125 37 0 65 42 37 18 1 0 2 2 1 1 7254.8 17378 6 16712 40232;40233 46594;46595 46595 2 SGDPACPEIK Unmodified 1072.4859 0.48590964 488;489 A2ALS5;A2ALS7 Rap1gap Rap1 GTPase-activating protein 1 no no 0 0 0 0 4 0 1 44.766 44.766 2 0.011528 13811 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.297 27.186 29.87 0 29.298 19.021 0 0 28 0 28 19 0 0 1 0 1 1 0 0 2460.7 17379 488;489 16713 40234 46596 46596 1 SGEDEQQEQTIAEDLVVTK Acetyl (Protein N-term) 2160.007 0.007002036 1599 Q3TGU7;P50580 Pa2g4 Proliferation-associated protein 2G4 yes no 1 0 0 0 2 0 1 79.007 79.007 3 8.8199E-08 27935 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.711 23.636 0 15.879 4.8217 16.108 0 9.594 0 15 6 15 0 9 0 1 1 1 0 1 12758 17380 1599 16714 40235 46597 46597 1 SGEDGPAAGPGAAAAAAAAR Acetyl (Protein N-term) 1679.7863 0.78632542 1998 Q3UMT1 Ppp1r12c Protein phosphatase 1 regulatory subunit 12C yes yes 1 0 0 0 1 0 1 50.056 50.056 2 1.7017E-39 14933 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.412 57.375 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17381 1998 16715 40236 46598 46598 1 SGEGCVITR Unmodified 977.46003 0.46002924 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 4 0 1 33.878 33.878 2 0.0063809 8673 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.438 38.459 49.237 0 20.31 0 28.291 29.041 46 0 19 0 28 28 1 0 1 0 1 1 4810 17382 3342 16716 40237 46599 46599 1 SGEHDFGAAFDGDGDR Unmodified 1651.6499 0.64989151 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 2.5 0.5 1 1 46.688 46.688 3 6.0515E-38 14651 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 153.2 142.1 69.56 75.097 58.288 39.614 81.674 156.5 65 74 56 37 83 149 2 2 1 1 2 3 27240 17383 3022 16718 40238;40239 46600;46601;46602 46600 3 SGEIEPVSVK Unmodified 1043.5499 0.5498901 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 51.033 51.033 2;3 3.5647E-05 16501 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.5 65.071 244.92 199.36 413.22 313.34 394.3 221.68 231 204 407 316 398 213 4 3 5 5 5 3 118510 17384 2175 16719 40240;40241;40242;40243 46603;46604;46605;46606;46607 46607 5 SGELAVQALDQFATVVEAK Unmodified 1975.0262 0.026221336 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 13 0 1 97.099 97.099 3 0.031838 38977 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 31.917 1.5015 29.952 18.196 0 0 19.874 0 28 19 0 0 19 0 1 1 0 0 1 0 3470.1 17385 577 16720 40244 46608 46608 1 SGELQGDEAQR Unmodified 1188.5371 0.53709359 713 D3YXA8;Q8R3L5 Slco3a1 Solute carrier organic anion transporter family member 3A1 yes no 0 0 0 0 1 0 1 31.3 31.3 2 0.0029115 7354 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.819 25.213 20.207 0 30.194 0 0 0 19 0 28 0 0 0 1 0 1 0 0 0 2463.8 17386 713 16721 40245 46609 46609 1 SGENFDK Unmodified 795.3399 0.33989733 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 5 0 1 39.747 39.747 2 0.03624 10990 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.296 6.1871 200.39 0 224.24 165.63 187.91 306.98 188 0 215 167 197 293 1 0 1 1 1 1 21314 17387 1783 16722 40246 46610 46610 1 SGETALGQAEEAAVGQADKR Unmodified 1986.9607 0.96066097 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 1 3.5 0.5 1 1 55.934 55.934 3 2.5265E-06 19127 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.302 46.617 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17388 692 16723 40247;40248 46611;46612 46612 2 SGETEDTFIADLVVGLCTGQIK Unmodified 2352.1519 0.15189213 1398;1399 P17182;Q6PHC1;P17183;A0A0N4SUX5;D3Z6E4 Eno1;Eno2 Alpha-enolase;Gamma-enolase;Enolase no no 0 0 0 0 8.22 2.78 2 4 4 2 2 4 104.18 104.18 3;4 1.2973E-34 36644 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.52 111.42 281.56 243.86 272.57 201.3 404.28 281.89 264 243 265 195 399 269 15 16 14 15 17 14 141480 17389 1398;1399 16724 40249;40250;40251;40252;40253;40254;40255;40256;40257;40258;40259;40260;40261;40262;40263;40264;40265;40266 46613;46614;46615;46616;46617;46618;46619;46620;46621;46622;46623;46624;46625;46626;46627;46628;46629;46630;46631;46632;46633;46634;46635;46636;46637;46638 46623 26 SGETNGYLDGTQAEPAAGPR Deamidation (N) 1990.8868 0.88682732 1213 O35874 Slc1a4 Neutral amino acid transporter A yes yes 0 1 0 0 2.5 0.5 1 1 49.858 49.858 3 3.3803E-07 16365 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.779 54.187 30.044 20.216 0 61.786 27.359 29.067 28 19 0 57 28 28 1 1 0 2 1 1 7641.1 17390 1213 16725 40267;40268 46639;46640 46640 332 2 SGETSQASAVGK Unmodified 1120.536 0.53603095 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 35.981 35.981 3 1.4954E-06 9646 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.772 49.216 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17391 3449;3451 16726 40269 46641 46641 1 SGETTTAEEIK Unmodified 1164.551 0.55101232 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 42.263 42.263 3 8.144E-05 13085 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.767 49.408 59.441 64.243 54.342 47.039 0 59.696 56 65 56 46 0 56 1 1 1 1 0 1 7504.4 17392 2688 16727 40270;40271 46642;46643 46643 2 SGEVLVNVK Unmodified 943.53385 0.53384611 3290 Q9QZD9;A2AE03 Eif3i Eukaryotic translation initiation factor 3 subunit I yes no 0 0 0 0 7 0 1 53.85 53.85 2 0.019881 16319 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.156 28.761 59.224 83.068 74.785 0 75.428 57.544 56 83 74 0 74 56 1 1 1 0 1 1 2682.9 17393 3290 16728 40272 46644 46644 1 SGEYSCIFLPEPVGR Unmodified 1709.8083 0.80830641 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 6 0 1 71.506 71.506 2 0.00025365 25504 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.401 72.868 0 19.58 38.05 18.161 17.994 0 0 19 37 19 18 0 0 1 1 1 1 0 3121.8 17394 1147 16729 40273 46645 46645 1 SGFLWPGLNVPLIK Unmodified 1539.8813 0.88133542 2881 Q99N87 Mrps5 28S ribosomal protein S5, mitochondrial yes yes 0 0 0 0 1 0 1 97.051 97.051 3 4.2922E-05 33503 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.531 73.972 3.1647 5.0252 4.8697 5.002 9.1842 0 3 5 5 5 9 0 1 1 1 1 1 0 515.59 17395 2881 16730 40274 46646 46646 1 SGGAVTPQQQQR Unmodified 1255.6269 0.62691165 1839 P84309 Adcy5 Adenylate cyclase type 5 yes yes 0 0 0 0 5 0 1 26.575 26.575 3 0.0060614 4872 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.354 33.821 14.932 0 15.073 0 0 9.594 14 0 14 0 0 9 1 0 1 0 0 1 941.37 17396 1839 16731 40275 46647 46647 1 SGGDTHSPPR Unmodified 1009.4577 0.45772105 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 2 0 1 17.357 17.357 3 0.0084131 2669 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.013 31.091 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17397 965 16732 40276 46648 46648 1 SGGGGGGGGSWGGR Unmodified 1104.4697 0.46968272 2985 Q9CX86 Hnrnpa0 Heterogeneous nuclear ribonucleoprotein A0 yes yes 0 0 0 0 5.5 0.5 1 1 29.638 29.638 2 0.00053975 5813 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.123 54.363 9.657 0 0 20.246 46.74 43.438 9 0 0 19 47 42 1 0 0 1 2 2 3611.3 17398 2985 16733 40277;40278 46649;46650 46650 2 SGGGGGGGLGSGGSIR Unmodified 1231.5905 0.59052614 661 CON__P35527 yes yes 0 0 0 0 8 3.56 1 1 1 34.111 34.111 2 6.9163E-07 7948 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.17 78.957 79.032 112.17 36.002 38.295 29.288 49.036 74 111 37 37 28 46 2 3 1 1 1 1 11741 + 17399 661 16734 40279;40280;40281 46651;46652;46653 46652 3 SGGIETIANEYSDR Unmodified 1510.69 0.68996541 1581 P48722;E0CY23;A0A0N4SW76;A0A0N4SVU2 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 3.5 0.5 1 1 56.556 56.556 3 0.00010093 19474 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.498 64.625 0 29.792 0 30.256 56.198 28.772 0 28 0 28 56 28 0 1 0 1 2 1 17424 17400 1581 16735 40282;40283 46654;46655 46655 2 SGGIPALVK Unmodified 840.5069 0.50690308 1878 Q02248;E9Q6A9 Ctnnb1 Catenin beta-1 yes no 0 0 0 0 9 0 1 58.286 58.286 2 0.0057659 17027 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.452 48.656 88.193 71.367 85.079 0 84.191 76.482 83 74 83 0 83 74 1 1 1 0 1 1 10648 17401 1878 16736 40284 46656 46656 1 SGGLILYTWPANDRPSTR Unmodified 2003.0225 0.022473362 889 E9Q2X2;Q6P9K9;A0A087WPQ9;E9Q3Q4;Q8C985 Nrxn3 Neurexin-3;Neurexin-3-beta;Neurexin-3-beta, soluble form;Neurexin-3-beta, C-terminal fragment yes no 0 0 0 1 10 0 1 64.445 64.445 3 0.0046287 17915 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.816 22.943 39.528 0 29.084 22.722 36.339 38.405 37 0 28 23 37 37 1 0 1 1 1 1 8033.9 17402 889 16737 40285 46657 46657 1 SGGLPLVLSMLTR Unmodified 1342.7643 0.76425675 1813 Q4FE56;P70398 Usp9x Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 4.67 5.19 2 1 90.905 90.905 2;3 0.00038912 32403 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.345 54.197 14.925 17.993 24.306 6.3946 38.044 29.019 14 18 23 6 38 28 1 2 2 1 3 2 7609.3 17403 1813 16738 40286;40287;40288 46658;46659;46660;46661 46659 4 SGGMSNELNNIISR Unmodified 1490.7147 0.71474038 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 6 0 1 61.636 61.636 3 0.044466 20865 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.993 22.021 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17404 2020 16739 40289 46662 46662 1 SGGRPEEYEGEYQCFAR Unmodified 2033.8538 0.85375305 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 1 3 0.816 1 1 1 46.961 46.961 3 5.2858E-06 14749 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.148 71.491 59.862 44.908 0 0 0 37 56 46 0 0 0 37 1 1 0 0 0 1 29846 17405 20;2354 16740 40290;40291;40292 46663;46664;46665 46665 3 SGGYGGSR Unmodified 739.32492 0.32491597 1677 P60824;K4DI65 Cirbp Cold-inducible RNA-binding protein yes no 0 0 0 0 5 0 1 20.709 20.709 2 0.0063253 2960 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.36 15.796 0 22.993 24.811 19.288 0 0 0 22 25 19 0 0 0 1 1 1 0 0 1805 17406 1677 16741 40293 46666 46666 1 SGHDQVVELLLER Unmodified 1493.7838 0.78380622 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5 0.816 1 1 1 65 65 3 8.8937E-05 22948 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.812 71.973 29.904 96.936 0 131.47 41.768 156.58 28 93 0 121 46 148 1 3 0 3 1 3 17411 17407 3449;3451;3452 16742 40294;40295;40296 46667;46668;46669 46668 3 SGIIFAGHDK Unmodified 1043.54 0.53999412 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 8 0 1 48.73 48.73 2 0.004144 13296 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.939 45.676 29.782 17.722 29.083 0 18.867 29.31 28 19 28 0 19 28 1 1 1 0 1 1 1903.8 17408 13 16743 40297 46670 46670 1 SGIIIGAEGDPPK Unmodified 1252.6663 0.66631685 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 7.4 2.87 1 2 1 1 57.953 57.953 2;3 2.4778E-08 19852 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.685 44.689 168.23 162.95 203.18 155.39 245.14 319.2 158 167 204 157 251 306 2 4 4 3 3 4 22413 17409 2619 16744 40298;40299;40300;40301;40302 46671;46672;46673;46674;46675 46675 5 SGILPILVHCLER Unmodified 1505.8388 0.83881868 75 O35343;A0A0B4J1E7;D3YTN1 Kpna4 Importin subunit alpha-3 yes no 0 0 0 0 10 0 1 76.638 76.638 3 0.001439 23508 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.831 24.945 49.225 26.473 0 0 0 20.254 46 28 0 0 0 19 1 1 0 0 0 1 5616.6 17410 75 16745 40303 46676 46676 1 SGILPILVK Unmodified 938.61645 0.61645353 1188 O35344 Kpna3 Importin subunit alpha-4 yes yes 0 0 0 0 11.2 0.829 1 1 2 76.327 76.327 2;3 0.0014107 20313 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.934 40.848 470.91 0 384.05 424.55 309.32 415.74 441 0 365 412 305 390 4 0 2 2 1 3 43633 17411 1188 16746 40304;40305;40306;40307 46677;46678;46679;46680 46680 4 SGILVPSEK Unmodified 928.52295 0.52294707 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 8.5 2.22 1 1 2 1 1 54.067 54.067 2;3 0.00084068 15758 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.311 37.713 315.76 262.39 238.27 317.87 248.28 282.08 296 269 231 306 250 269 3 4 3 4 2 3 57875 17412 1424 16747 40308;40309;40310;40311;40312;40313 46681;46682;46683;46684;46685;46686 46684 6 SGIYETR Unmodified 824.40283 0.40283194 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 5 0 1 34.985 34.985 2 0.027043 8694 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.308 43.506 127.51 88.101 134.73 0 160.34 143.6 120 93 130 0 158 139 1 1 1 0 1 1 28019 17413 1836 16748 40314 46687 46687 1 SGKPAELLK Unmodified 941.55458 0.55458155 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 8 0 1 48.834 48.834 3 0.036187 13314 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.143 8.5134 630.05 577.17 739.35 649.43 843.06 624.07 594 594 745 649 855 608 1 1 1 1 1 1 37759 17414 1537 16749 40315 46688 46688 1 SGKYDLDFK Unmodified 1071.5237 0.52367535 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 1 7 0 1 55.765 55.765 3 0.034314 17171 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.784 2.2034 975.26 759.21 995.91 896.77 826.8 1010.4 918 791 1004 889 863 970 1 1 1 1 1 1 129390 17415 1398 16750 40316 46689 46689 1 SGLCSALTTYFFGADLK Unmodified 1849.892 0.89203604 2689 Q8VCX5 Micu1 Calcium uptake protein 1, mitochondrial yes yes 0 0 0 0 11 1 1 1 92.522 92.522 3 4.0219E-06 30074 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.208 78.926 0 35.112 0 0 19.874 9.594 0 33 0 0 19 9 0 2 0 0 1 1 3025.7 17416 2689 16751 40317;40318 46690;46691 46690 2 SGLGLGAASASTSGSGPADSVMR Unmodified 2034.964 0.96403178 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 10 3 1 1 58.233 58.233 3 2.8851E-16 18577 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.341 76.788 148.57 79.657 28.938 116.36 172.15 192.3 139 83 28 111 176 185 2 1 1 2 2 2 10840 17417 2295 16752 40319;40320 46692;46693 46692 2 SGLKDPEK Unmodified 872.46035 0.46034682 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 1 7 0 1 39.761 39.761 3 0.064069 9744 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.756 9.1455 306.32 300.53 199.29 211.83 251.64 308.36 288 305 211 209 260 296 1 1 1 1 1 1 12840 17418 2336 16753 40321 46694 46694 1 SGLTPLHVAAHYDNQK Unmodified 1749.8798 0.87983187 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812 Ank3 Ankyrin-3 yes no 0 0 0 0 7 0 1 48.244 48.244 4 3.7317E-05 13715 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.148 59.652 0 58.679 54.117 66.323 79.587 0 0 56 56 65 79 0 0 1 1 1 1 0 4351.1 17419 3450 16754 40322 46695 46695 1 SGLTSLHLAAQEDK Unmodified 1468.7522 0.75217174 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 7 0 1 53.034 53.034 3 0.0096402 15940 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.17 25.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17420 3449;3451;3452 16755 40323 46696 46696 1 SGLTSLHLAAQEDKVNVADILTK Unmodified 2422.3068 0.30675329 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 1 8 0 2 73.744 73.744 4;5 2.681E-15 25028 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.557 72.45 0 43.181 138.29 92.159 66.321 0 0 42 134 93 65 0 0 1 2 2 1 0 14495 17421 3449;3451;3452 16756 40324;40325 46697;46698 46698 2 SGMFWLR Unmodified 895.43744 0.4374433 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 68.07 68.07 2 0.01962 19189 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.66 37.391 448 0 60.592 0 58.576 0 448 0 56 0 56 0 1 0 1 0 1 0 126170 17422 2998 16757 40326;40327 46699;46700 46699 2 SGMNVAR Unmodified 733.35411 0.35410761 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8;A0A1L1SUV0;A0A1L1ST52 Pkm Pyruvate kinase PKM yes no 0 0 0 0 13 0 1 29.587 29.587 2 0.0049004 6448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.1 29.815 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17423 1609 16758 40328 46701 46701 1 SGNFGGSR Unmodified 780.35147 0.35146507 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 0 0 0 8 2.16 1 1 1 26.839 26.839 2 0.014258 4625 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.744 36.957 95.561 80.132 134.97 129.07 117.89 154.61 90 78 130 125 118 148 3 3 2 2 2 2 66142 17424 1271 16759 40329;40330;40331 46702;46703;46704;46705 46702 4 SGNGEVTFENVK Deamidation (N) 1280.5885 0.58846046 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 1 0 0 5 0 1 56.503 56.503 2 0.0064361 19075 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.555 43.934 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17425 2396 16760 40332 46706 46706 923 1 SGNLTEDDKHNNAK Unmodified 1541.707 0.70701246 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 1 5 0 1 34.285 34.285 4 0.028789 8380 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.751 21.676 29.807 46.934 0 50.278 0 49.036 28 46 0 46 0 46 1 1 0 1 0 1 2221 17426 269 16761 40333 46707 46707 1 SGNQVSEYISNTFLDK Unmodified 1800.853 0.853008 559;1290;598 A6XDB1;A6XDB0;B1PSD9;B2KF57;B2KF84;F6QFD1;E9PVU7;Q01063;B1AWD1;Q3TTI9;Q6IQY6;B1AWD0;O89084;B1AWC8;Q8VBU5;B1AWC9 Pde4d;Pde4b;Pde4a cAMP-specific 3',5'-cyclic phosphodiesterase 4D;cAMP-specific 3',5'-cyclic phosphodiesterase 4A no no 0 0 0 0 6 0 1 77.538 77.538 3 7.2973E-09 28360 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.874 63.316 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17427 559;1290;598 16762 40334 46708 46708 1 SGPADSFNDR Unmodified 1064.4523 0.45230133 2434 Q8BMJ2 Lars Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3 0 1 36.877 36.877 2 0.022845 10596 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.955 13.994 29.856 37.355 0 39.747 36.876 0 28 37 0 37 37 0 1 1 0 1 1 0 2847 17428 2434 16763 40335 46709 46709 1 SGPEAPEWYQVELK Unmodified 1631.7831 0.78313752 2718 Q8VHL1 Setd7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 0 4 0 1 71.203 71.203 3 0.019285 25813 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.552 20.446 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1490.6 17429 2718 16764 40336 46710 46710 1 SGPFAPVLSATSR Unmodified 1288.6776 0.67755023 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 10.7 1.89 1 1 1 1 2 61.932 61.932 2;3 2.3107E-15 19591 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.57 96.919 499.1 410.28 433.65 272.78 362.58 535.83 469 417 421 274 366 511 7 6 6 6 6 7 89599 17430 2958 16765 40337;40338;40339;40340;40341;40342 46711;46712;46713;46714;46715;46716;46717;46718;46719;46720 46711 10 SGPFGQIFRPDNFVFGQSGAGNNWAK Unmodified 2797.3361 0.33609636 1795;2283;1863;2975;3072 P99024;G3UZR1;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 0 1 9.93 3.68 2 1 3 2 5 2 83.976 83.976 3;4;5 1.4965E-62 26522 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 161.53 130.94 9195.9 7439.1 9089.6 8529 9158.2 9692 8654 7665 9087 8436 9352 9327 28 24 22 28 21 25 4249400 17431 1863;1795;2283;2975;3072 16766 40343;40344;40345;40346;40347;40348;40349;40350;40351;40352;40353;40354;40355;40356;40357 46721;46722;46723;46724;46725;46726;46727;46728;46729;46730;46731;46732;46733;46734;46735;46736;46737;46738;46739;46740;46741;46742;46743;46744;46745;46746;46747;46748;46749;46750;46751;46752;46753;46754;46755;46756;46757;46758 46732 38 SGPFGQIFRPDNFVFGQSGAGNNWAK Deamidation (N) 2798.3201 0.32011195 1795;2283;1863;2975;3072 P99024;G3UZR1;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 1 0 1 10.8 1.55 1 3 4 4 1 4 85.068 85.068 3;4;5 5.2041E-41 29486 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 134.81 116.25 1869.7 1236.1 1544.1 1163.1 1894.3 1550.6 1757 1242 1496 1116 1890 1489 11 13 9 8 11 11 1259500 17432 1863;1795;2283;2975;3072 16766 40358;40359;40360;40361;40362;40363;40364;40365;40366;40367;40368;40369;40370;40371;40372;40373;40374 46759;46760;46761;46762;46763;46764;46765;46766;46767;46768;46769;46770;46771;46772;46773;46774;46775;46776;46777;46778;46779;46780;46781;46782;46783;46784;46785;46786 46762 727;728;729 28 SGPFGQIFRPDNFVFGQSGAGNNWAK 3 Deamidation (N) 2800.2881 0.28814312 1795;2283;1863;2975;3072 P99024;G3UZR1;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 3 0 1 11 2 1 1 86.662 86.662 4 2.7942E-11 30705 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.377 52.174 110.1 35.98 39.732 50.278 0 0 103 37 37 46 0 0 2 1 1 1 0 0 10797 17433 1863;1795;2283;2975;3072 16766 40375;40376 46787;46788 46787 727;728;729 2 SGPGVVNTKPR Unmodified 1110.6146 0.61455605 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 1 8.5 0.5 1 1 34.522 34.522 3 0.00098804 6851 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.522 59.863 0 58.703 52.682 118.59 36.461 38.402 0 56 56 112 37 37 0 1 1 2 1 1 5737.7 17434 2483 16767 40377;40378 46789;46790 46789 2 SGPKPFSAPK Unmodified 1014.5498 0.54983053 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 1 11 0 1 44.504 44.504 3 0.027784 9482 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.08 10.525 0 47.49 86.957 0 0 88.478 0 46 83 0 0 83 0 1 1 0 0 1 4551.8 17435 1536 16768 40379 46791 46791 1 SGPTQPTAR Unmodified 913.46174 0.4617438 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 5 0 1 24.593 24.593 2 0.005518 4111 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.265 49.468 0 0 0 9.837 0 9.594 0 0 0 9 0 9 0 0 0 1 0 1 2106.8 17436 2483 16769 40380 46792 46792 1 SGQCVQAFETHESDVNSVR Unmodified 2148.9494 0.94944435 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 3 0 1 45.995 45.995 3 6.1666E-14 14796 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.07 97.678 29.923 0 20.407 0 19.874 0 28 0 19 0 19 0 1 0 1 0 1 0 5257.1 17437 1752 16770 40381 46793 46793 1 SGQKPVLSDVHAELDR Unmodified 1749.901 0.90096124 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 1 6 0 1 50.523 50.523 4 0.00058253 15560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.764 36.922 0 67.789 81.982 84.335 79.617 96.866 0 65 83 83 83 93 0 1 1 1 1 1 11415 17438 2646 16771 40382 46794 46794 1 SGQLLWEALENLVNR Unmodified 1740.9159 0.91588303 959 Q0GNC1;E9QLA5 Inf2 Inverted formin-2 yes no 0 0 0 0 10 0 1 102.16 102.16 3 0.001226 33086 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.527 37.598 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1323.8 17439 959 16772 40383 46795 46795 1 SGQQIVGPPR Unmodified 1037.5618 0.56179219 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 6.33 0.471 2 1 38.513 38.513 2;3 6.2574E-05 9974 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.21 70.81 74.362 49.7 83.562 89.097 186.01 0 70 51 84 88 185 0 2 1 2 2 3 0 12336 17440 3000 16773 40384;40385;40386 46796;46797;46798 46797 3 SGQVLEVSGSK Unmodified 1089.5666 0.5666028 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 48.054 48.054 2;3 8.2621E-08 15045 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.93 86.536 547.9 209.98 609.29 573.28 715.45 878.22 514 213 594 569 738 843 3 2 4 5 5 5 172720 17441 1741 16774 40387;40388;40389;40390;40391;40392 46799;46800;46801;46802;46803;46804 46804 6 SGSAEAAPR Unmodified 844.40389 0.40389457 2613 Q8K3I4;A0A1L1SQQ9 Myrip Rab effector MyRIP yes no 0 0 0 0 2 0 1 22.231 22.231 2 0.018804 3876 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.265 24.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17442 2613 16775 40393 46805 46805 1 SGSHGYDMSTFIR Unmodified 1456.6405 0.6405128 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4;A0A087WSI9 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 6 0 1 52.101 52.101 3 0.00034986 16359 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.513 55.086 60.088 0 0 70.004 55.36 0 56 0 0 65 56 0 1 0 0 1 1 0 10728 17443 2129 16776 40394 46806 46806 1 SGSISSTELQQALSQMGYNLSPQFTQLLVSR Unmodified 3369.6875 0.68746958 2364 Q8BFY6 Pef1 Peflin yes yes 0 0 0 0 10.5 0.5 1 1 101.47 101.47 4 7.2512E-09 32958 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.767 49.101 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 3515.3 17444 2364 16777 40395;40396 46807;46808 46807 2 SGSIVVEGHELHEEDIR Unmodified 1904.9228 0.9228189 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3 0 1 46.904 46.904 4 0.018351 15212 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 34.721 16.357 29.687 27.172 36.989 28.399 0 29.848 28 28 37 28 0 28 1 1 1 1 0 1 2127.3 17445 2459 16778 40397 46809 46809 1 SGSLAAESIFK Unmodified 1108.5764 0.57643921 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 7 0 1 64.38 64.38 3 0.001201 21247 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.574 27.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17446 2244 16779 40398 46810 46810 1 SGSLSNVAGGR Unmodified 1003.5047 0.50467125 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 6 0 1 36.511 36.511 2 5.9606E-05 8993 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.04 53.319 39.328 16.752 48.569 0 0 39.442 37 19 46 0 0 37 1 1 1 0 0 1 3036 17447 2226 16780 40399 46811 46811 1 SGSPMAR Unmodified 704.32756 0.3275585 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 5.5 1.12 1 1 1 1 25.329 25.329 2 0.0085835 4440 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 126.2 65.416 1524.7 968.79 1115 648.77 2128.9 1742.1 1431 1023 1118 691 2121 1687 3 3 4 4 4 2 237060 17448 991;1305 16781 40400;40401;40402;40403 46812;46813;46814;46815 46813 4 SGSRPQSPSGDAESR Unmodified 1516.6866 0.68661137 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 1 8 5 1 1 21.825 21.825 3 0.00043323 3211 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.919 32.635 12.762 22.547 0 0 0 12.792 12 22 0 0 0 12 1 1 0 0 0 1 821.33 17449 2438 16782 40404;40405 46816;46817 46817 2 SGSYDEASEEITDSFWEVGNYK Acetyl (Protein N-term) 2554.066 0.065973478 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 1 0 0 0 6.25 3.96 1 1 1 1 96.306 96.306 3 1.449E-27 32357 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.55 68.104 11.754 88.139 18.537 28.763 86.292 37.759 11 83 18 28 85 37 1 4 2 4 5 2 58441 17450 2133 16783 40406;40407;40408;40409 46818;46819;46820;46821;46822 46818 5 SGSYDEASEEITDSFWEVGNYKR Acetyl (Protein N-term) 2710.1671 0.16708451 2133 Q61644;A0A338P6K4 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes no 1 0 0 1 6.25 3.96 1 1 1 1 85.524 85.524 3 3.7217E-35 32496 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.238 76.051 23.879 4.1516 76.192 19.34 4.0415 28.667 23 4 75 19 4 27 2 1 3 1 1 2 20862 17451 2133 16784 40410;40411;40412;40413 46823;46824;46825;46826 46824 4 SGTAHEYSSCPDDAIFQSLAR Unmodified 2311.0175 0.017523918 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 5 0 1 60.578 60.578 3 3.7458E-07 21053 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.184 55.486 9.5373 0 20.125 8.6375 0 0 9 0 19 9 0 0 1 0 1 1 0 0 3604.1 17452 1868 16785 40414 46827 46827 1 SGTCPVCR Unmodified 935.39532 0.39532049 2308 Q80U04;B1AXU3;B1AXU4;O55176 Pja2;Pja1 E3 ubiquitin-protein ligase Praja-2;E3 ubiquitin-protein ligase Praja-1 yes no 0 0 0 0 5 0 1 27.073 27.073 2 0.059445 5110 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.799 41.095 15.022 0 0 0 13.962 19.856 14 0 0 0 14 19 1 0 0 0 1 1 766.41 17453 2308 16786 40415 46828 46828 1 SGTGIAAMSVMRPELIMK Unmodified 1890.9729 0.97294567 941 P63082;E9Q9C5;D3Z3B2 Atp6v0c V-type proton ATPase 16 kDa proteolipid subunit yes no 0 0 0 1 9.5 0.5 1 1 72.327 72.327 3 1.6339E-06 23734 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.107 62.671 133.42 68.721 60.964 35.934 91.917 77.587 125 74 60 37 92 74 2 2 1 1 2 1 13068 17454 941 16787 40416;40417 46829;46830 46829 2 SGTIFDNFLITNDEAYAEEFGNETWGVTK Unmodified 3267.4884 0.48841864 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 6.5 0.5 1 1 101.38 101.38 4 2.0915E-13 37375 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.782 58.366 22.33 23.796 14.014 15.173 20.588 19.838 21 24 15 15 21 19 2 2 2 2 2 1 5721.3 17455 1375 16788 40418;40419 46831;46832 46831 2 SGTISVNSR Unmodified 919.47231 0.47230849 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 0 0 0 6 0 1 33.747 33.747 2 0.019603 7668 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.404 17.247 0 58.811 46.243 0 47.137 28.503 0 56 46 0 46 28 0 1 1 0 1 1 2826.8 17456 889 16789 40420 46833 46833 1 SGTISVNTLR Unmodified 1046.572 0.57202253 2968 Q9CS84;E0CY11 Nrxn1 Neurexin-1 yes no 0 0 0 0 7 0 1 47.298 47.298 2 0.0041558 13279 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.243 26.931 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17457 2968 16790 40421 46834 46834 1 SGTLVIDFR Unmodified 1006.5447 0.54474515 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 13 0 1 63.567 63.567 2 0.0077198 22902 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.425 41.259 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17458 20;2354 16791 40422 46835 46835 1 SGTSEFLNK Unmodified 981.47673 0.47672516 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 8.67 3.09 1 1 1 51.44 51.44 2 7.0497E-05 15297 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.57 51.615 206.13 259.63 122.23 169 312.44 270.49 194 259 120 158 315 259 3 3 1 2 3 2 21314 17459 1324 16792 40423;40424;40425 46836;46837;46838 46837 3 SGTSQEELR Unmodified 1005.4727 0.47270242 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 3 0 1 28.767 28.767 2 0.030067 6810 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.167 13.504 14.952 13.888 0 15.302 0 24.518 14 14 0 14 0 23 1 1 0 1 0 1 2193.9 17460 24 16793 40426 46839 46839 1 SGTVDPQELQK Unmodified 1200.5986 0.59863121 2209 Q6P069 Sri Sorcin yes yes 0 0 0 0 4.5 0.5 1 1 49.151 49.151 2;3 3.3216E-08 15575 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.35 41.914 0 105.59 103.27 42.527 84.864 0 0 102 102 46 83 0 0 2 1 1 1 0 9930.3 17461 2209 16794 40427;40428 46840;46841 46841 2 SGTVTPGR Unmodified 773.40317 0.40316629 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 5.5 0.5 1 1 26.144 26.144 2 0.017927 4786 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.474 22.927 39.414 56.926 86.06 145.29 79.995 155.49 37 56 83 139 83 148 1 1 1 2 1 2 19498 17462 415 16795 40429;40430 46842;46843 46842 2 SGVGNIFIK Unmodified 933.52837 0.5283668 1484 P29341;A0A2I3BR37;Q8C7D3 Pabpc1;Pabpc5 Polyadenylate-binding protein 1 yes no 0 0 0 0 10.5 0.5 1 1 63.613 63.613 2 0.0076677 17641 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.334 25.618 0 97.429 188.02 165.81 235.06 0 0 93 186 166 232 0 0 1 2 2 2 0 17910 17463 1484 16796 40431;40432 46844;46845 46844 2 SGVISDNELQQALSNGTWTPFNPVTVR Deamidation (N) 2930.441 0.44101494 1361 P12815 Pdcd6 Programmed cell death protein 6 yes yes 0 1 0 0 6.5 0.5 1 1 89.684 89.684 3 6.4E-23 33811 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.176 69.436 5.3111 0 14.057 14.676 4.5558 0 5 0 14 14 5 0 1 0 2 1 1 0 3226.8 17464 1361 16797 40433;40434 46846;46847 46846 431 2 SGVPDLVALLAVR Unmodified 1308.7765 0.776536 1087 G3X9N3 Pnmal2 yes yes 0 0 0 0 10.5 0.5 1 1 89.956 89.956 3 0.0043215 29171 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.675 29.774 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 1936.8 17465 1087 16798 40435;40436 46848;46849 46848 2 SGVVTDGVK Unmodified 860.46035 0.46034682 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9;A0A0U1RNK9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 9.5 3.5 1 1 43.81 43.81 2 0.0013139 12595 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.55 47.87 197.7 160.22 180.34 206.92 281.82 258.46 186 158 185 204 287 250 2 1 2 2 2 2 16094 17466 3155 16799 40437;40438 46850;46851 46850 2 SGYFDER Unmodified 872.36645 0.36644643 1490 P30275;A2ARP5;B0R0F0 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 7.33 4.03 1 1 1 41.67 41.67 2 0.015212 12059 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.5 40.46 545.93 176.45 609.28 499.55 507.46 465.22 513 197 596 499 517 450 3 1 3 3 2 2 155240 17467 1490 16800 40439;40440;40441 46852;46853;46854 46854 3 SGYIEANELK Unmodified 1122.5557 0.55570376 1892 Q08331;Q8CCS7 Calb2 Calretinin yes no 0 0 0 0 7.25 3.34 2 1 1 54.208 54.208 2;3 1.7583E-05 18084 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.81 58.286 39.406 155.77 151.14 181.38 387.07 139.83 37 148 148 176 380 139 1 3 3 3 3 3 37572 17468 1892 16801 40442;40443;40444;40445 46855;46856;46857;46858 46858 4 SGYLLPDTK Unmodified 992.51786 0.51786169 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 7.5 0.5 1 1 58.142 58.142 3 0.0036194 18399 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.435 25.711 0 0 0 0 56.251 67.685 0 0 0 0 56 65 0 0 0 0 1 1 4722.6 17469 1324 16802 40446;40447 46859;46860 46859 2 SGYPDIGFPLFPLSK Unmodified 1636.8501 0.85009487 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 10.8 1.48 1 1 1 1 92.631 92.631 3 2.2541E-05 30095 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.311 44.919 0 153.16 0 0 103.43 95.121 0 149 0 0 102 92 0 4 0 0 2 2 22411 17470 2262 16803 40448;40449;40450;40451 46861;46862;46863;46864 46862 4 SGYQQAASEHGLVVIAPDTSPR Unmodified 2282.1291 0.12912328 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43;H3BJC6;H3BL99 Esd S-formylglutathione hydrolase yes no 0 0 0 0 5.5 0.5 1 1 54.631 54.631 3 4.7252E-26 17489 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.74 85.51 0 19.729 29.112 0 29.288 0 0 19 28 0 28 0 0 1 1 0 1 0 6088 17471 1122 16804 40452;40453 46865;46866 46866 2 SGYSSPGSPGTPGSR Unmodified 1392.627 0.62697123 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 7 3.03 2 2 1 34.581 34.581 2;3 1.5969E-11 8630 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.005 73.167 69.008 43.906 86.697 36.607 161.24 104.69 65 47 84 37 158 102 2 2 2 2 3 2 20506 17472 572;46 16805 40454;40455;40456;40457;40458 46867;46868;46869;46870;46871 46871 5 SGYSTAR Unmodified 740.34532 0.34531706 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 9 4 1 1 23.153 23.153 2 0.007051 3634 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130 72.19 421.01 328.14 376.64 309.68 356.33 418.36 396 341 381 310 368 402 2 2 2 2 2 2 53059 17473 1329 16806 40459;40460 46872;46873 46872 2 SHAPPGTR Unmodified 821.4144 0.41439968 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 5 0.816 1 1 1 16.662 16.662 3 0.0054414 2464 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.665 41.194 24.45 31.057 16.624 19.805 8.3725 31.741 23 31 17 19 9 30 5 6 4 4 2 6 5227.7 17474 1275 16807 40461;40462;40463 46874;46875;46876;46877;46878;46879 46877 6 SHASPAAK Acetyl (Protein N-term) 809.40317 0.40316629 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 1 0 0 0 4 1 1 1 24.064 24.064 2 0.0097174 3947 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.081 33.176 14.935 0 14.697 8.43 28.233 19.448 14 0 14 9 28 19 1 0 1 1 1 1 941.52 17475 2952 16808 40464;40465 46880;46881 46881 2 SHASTATQTPR Unmodified 1155.5632 0.56324876 2312 Q80U49 Cep170b Centrosomal protein of 170 kDa protein B yes yes 0 0 0 0 4 0 1 18.291 18.291 3 0.00067089 2559 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.085 54.171 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 606.59 17476 2312 16810 40466 46882 46882 1 SHAVFNIIFTQK Unmodified 1403.7561 0.75613491 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 12 0 1 67.031 67.031 3 0.00054887 16624 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.234 39.575 0 0 135.28 120.84 119.97 0 0 0 130 120 120 0 0 0 1 1 1 0 8557.6 17477 24 16811 40467 46883 46883 1 SHAVFQIILR Unmodified 1182.6873 0.68732706 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 11 0 1 59.108 59.108 3 0.0056685 15211 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.348 38.618 0 58.658 55.418 37.138 0 0 0 56 56 37 0 0 0 1 1 1 0 0 6625.6 17478 810 16812 40468 46884 46884 1 SHDPIEAR Unmodified 923.44609 0.44609374 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 3 0.816 1 1 1 25.964 25.964 3 0.00045872 5519 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.61 90.962 117.52 138.25 166.35 218.88 305.46 132.82 111 140 167 213 306 130 2 3 2 3 3 1 57862 17479 3449;3451 16813 40469;40470;40471 46885;46886;46887;46888 46887 4 SHEAEVLK Unmodified 911.47125 0.47124585 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 36.366 36.366 3 0.00025635 9961 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.58 57.844 729.88 460.33 848.65 1136.4 531.05 1049.1 686 486 840 1083 534 995 5 4 5 5 4 6 157650 17480 1619 16814 40472;40473;40474;40475;40476 46889;46890;46891;46892;46893;46894;46895 46890 7 SHENEAEALR Unmodified 1154.5316 0.53161428 728 D3YZ62;D3Z4J3;Q99104;F6TDE5;F6Z2S4;B8JK05 Myo5a Unconventional myosin-Va yes no 0 0 0 0 1.33 0.471 2 1 26.937 26.937 2;3 1.1088E-05 5731 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 110.39 67.079 59.85 0 39.957 28.245 18.99 0 56 0 38 28 19 0 2 0 2 2 1 0 33807 17481 728 16815 40477;40478;40479 46896;46897;46898 46898 3 SHESAPK Unmodified 754.36097 0.36096712 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 4.5 0.5 1 1 23 23 3 0.0054561 3898 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.029 54.908 39.522 29.681 36.708 30.21 36.358 98.101 37 28 37 28 37 93 1 1 2 1 1 2 3857.6 17482 2334 16816 40480;40481 46899;46900 46899 2 SHFESSTVR Unmodified 1048.4938 0.49377221 3345;369 A0A286YDY4;A0A286YCY1;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 4 0 1 27.558 27.558 3 0.0028248 5751 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.056 29.278 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 4379.7 17483 369;3345 16817 40482 46901 46901 1 SHGELSEER Unmodified 1042.468 0.46795139 395 A0A2R8VHU8;E9Q7U2;Q8CGU1;A0A2R8VKP5 Calcoco1 Calcium-binding and coiled-coil domain-containing protein 1 yes no 0 0 0 0 1 0 1 22.462 22.462 3 0.0030902 3682 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.847 45.272 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 3817 17484 395 16818 40483 46902 46902 1 SHGGAGDNGGGDDSK Deamidation (N) 1330.5022 0.50216464 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 1 0 0 2 0 1 24.065 24.065 3 0.015432 4548 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.14 31.477 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 1089.8 17485 1817 16819 40484 46903 46903 738 1 SHHSLDR Unmodified 850.40456 0.40456327 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 4 0 1 16.21 16.21 3 0.040237 2336 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.403 14.165 3.1819 3.9937 2.856 3.0164 4.9132 5.1898 3 4 3 3 5 5 1 1 1 1 1 1 420.83 17486 1412 16820 40485 46904 46904 1 SHHVDEQEPR Unmodified 1232.5534 0.55341235 1079 H7BX46;G3X932;P59281;H3BJM3;H3BLS4;H3BKC8 Arhgap39 Rho GTPase-activating protein 39 yes no 0 0 0 0 1 0 2 19.559 19.559 3;4 2.8216E-05 2934 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.02 55.592 40.543 36.502 7.9372 35.11 25.812 29.111 38 37 9 33 27 28 3 3 1 2 2 3 3502.1 17487 1079 16821 40486;40487 46905;46906;46907 46905 3 SHIDQLVLIFAGK Unmodified 1439.8136 0.81364979 2657 Q8R317 Ubqln1 Ubiquilin-1 yes yes 0 0 0 0 10.5 0.5 1 1 81.7 81.7 3;4 7.6685E-05 25289 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.466 62.441 69.372 171.77 74.205 30.604 0 78.884 65 167 74 28 0 74 2 3 1 1 0 2 15390 17488 2657 16823 40488;40489 46908;46909;46910 46909 3 SHIEENQR Unmodified 1011.4734 0.47337112 1991 Q3UJU9 Rmdn3 Regulator of microtubule dynamics protein 3 yes yes 0 0 0 0 2.5 0.5 1 1 19.142 19.142 3 0.00024788 3006 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.35 58.806 14.952 13.888 19.941 38.75 26.692 23.756 14 14 19 37 28 23 1 1 1 2 2 2 5424 17489 1991 16824 40490;40491 46911;46912 46911 2 SHIMAAK Unmodified 756.39524 0.39524414 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 8 0 1 34.236 34.236 3 0.018012 6756 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.993 41.167 59.91 35.328 0 0 75.428 57.544 56 37 0 0 74 56 1 1 0 0 1 1 5817.6 17490 1825 16825 40492 46913 46913 1 SHIVIPFK Unmodified 939.55419 0.55418762 298 A0A1L1SS44;Q60709;Q06335 Aplp2 Amyloid-like protein 2 yes no 0 0 0 0 10.5 0.5 1 1 56.636 56.636 3 0.010599 14182 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.999 61.999 118.7 80.308 0 131.03 64.782 49.036 111 83 0 121 65 46 2 2 0 2 1 1 9992.3 17491 298 16827 40493;40494 46914;46915 46915 2 SHLAEDSQTHSADAADGSDGDLNR Unmodified 2468.0436 0.043615327 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 1 0 1 33.56 33.56 4 4.6695E-16 8314 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.509 79.935 9.51 29.151 0 0 27.961 38.644 9 28 0 0 28 37 1 1 0 0 1 1 5323.8 17492 3449;3451 16828 40495 46916 46916 1 SHLAIVQR Unmodified 922.53485 0.53484916 367 A0A286YDL2;Q3TWN3;Q0GA42 Cnnm2;Cnnm1 Metal transporter CNNM2;Metal transporter CNNM1 yes no 0 0 0 0 8 0 1 34.246 34.246 3 0.049531 6629 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.218 19.425 78.727 72.559 51.938 87.623 0 0 74 74 56 83 0 0 1 1 1 1 0 0 26578 17493 367 16829 40496 46917 46917 1 SHLEYLSTLK Unmodified 1189.6343 0.63428844 1348 P10852;A0A0U1RP98;A0A0U1RPL8 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 8.5 0.5 1 1 55.591 55.591 3 0.00020096 15696 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.096 39.413 236.25 248.1 117.77 210.92 267.42 124.29 222 250 120 204 269 120 2 2 1 2 2 1 40605 17494 1348 16830 40497;40498 46918;46919 46919 2 SHNLNVEYNIFEGVECR Unmodified 2078.948 0.94798779 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 6 0 1 64.947 64.947 3 7.1198E-05 22300 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.808 48.928 0 39.368 0 19.91 45.562 47.736 0 37 0 19 46 46 0 1 0 1 1 1 4030.3 17495 207 16831 40499 46920 46920 1 SHQGVVIAADWLVGGK Unmodified 1635.8733 0.87328993 2519 Q8CBE3 Wdr37 WD repeat-containing protein 37 yes yes 0 0 0 0 9 0 1 70.111 70.111 3 0.011402 22794 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.52 13.184 39.48 0 37.207 58.99 0 0 37 0 37 56 0 0 1 0 1 1 0 0 3369.1 17496 2519 16832 40500 46921 46921 1 SHQTGIQASEDVK Acetyl (Protein N-term) 1440.6845 0.68448611 2776 Q91YR1 Twf1 Twinfilin-1 yes yes 1 0 0 0 2.5 0.5 1 1 39.677 39.677 2 3.3222E-18 11748 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.397 63.406 38 0 0 0 0 0 38 0 0 0 0 0 2 0 0 0 0 0 5811.5 17497 2776 16833 40501;40502 46922;46923 46922 2 SHSIFLINIK Unmodified 1170.6761 0.67609367 1481;1507 P28738;P33175 Kif5c;Kif5a Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A no no 0 0 0 0 11.5 0.5 1 1 65.246 65.246 3 1.1497E-05 17772 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.29 81.585 39.701 107.51 60.931 116.47 64.949 59.696 37 102 65 111 65 56 1 1 1 2 1 1 21345 17498 1481;1507 16834 40503;40504 46924;46925 46924 2 SHSIFLINVK Unmodified 1156.6604 0.66044361 2139 Q61768;E9QAK5 Kif5b Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 0 10.5 0.5 1 1 61.383 61.383 3 5.4736E-06 16098 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 125.48 82.198 78.858 113.08 46.165 60.129 57.345 156.13 74 112 46 56 60 148 1 2 1 1 1 2 20238 17499 2139 16835 40505;40506 46926;46927 46927 2 SHSSSQFR Unmodified 934.42569 0.42569264 2237 Q6PD28 Ppp2r5b yes yes 0 0 0 0 5 0 1 18.841 18.841 3 0.030867 2638 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.418 36.43 0 0 9.738 0 9.414 0 0 0 9 0 9 0 0 0 1 0 1 0 359.32 17500 2237 16836 40507 46928 46928 1 SHSYTPDN Unmodified 919.36717 0.36717471 2223 Q6P5U7 Nwd2 NACHT and WD repeat domain-containing protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 25.706 25.706 2 0.021314 5011 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.415 62.51 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1156.5 17501 2223 16837 40508;40509 46929;46930 46930 2 SHTFLPK Unmodified 828.44939 0.4493882 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 10 1.87 1 1 1 1 42.83 42.83 3 0.0053749 12634 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.163 52.661 305.83 133.73 243.82 141.32 299.11 238.78 287 139 240 139 300 232 3 2 3 1 2 2 59051 17502 1390 16838 40510;40511;40512;40513 46931;46932;46933;46934 46934 4 SHTGEAAAVR Unmodified 997.49411 0.49410656 1660 P59017 Bcl2l13 Bcl-2-like protein 13 yes yes 0 0 0 0 8.5 4.5 1 1 20.856 20.856 3 0.0014482 3000 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.363 38.298 29.856 37.355 0 40.441 0 5.33 28 37 0 37 0 5 2 2 0 1 0 1 2583.1 17503 1660 16839 40514;40515 46935;46936 46935 2 SHTILLVQPTK Acetyl (Protein N-term) 1277.7343 0.73433683 326 A0A1W2P7H9;A0A1W2P7T3;P84089 Erh Enhancer of rudimentary homolog yes no 1 0 0 0 7.5 0.5 1 1 59.016 59.016 2 4.8404E-16 18796 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.353 10.002 59.622 24.815 97.249 35.643 73.789 117.29 56 28 93 37 74 112 1 1 2 1 1 2 15976 17504 326 16840 40516;40517 46937;46938 46937 2 SHVECAR Unmodified 857.38138 0.38138499 1992 Q3UKJ7 Smu1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 0 0 0 0 3.5 0.5 1 1 16.615 16.615 3 0.011957 2367 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.637 45.214 9.5993 0 16.942 7.2188 0 29.848 9 0 16 7 0 28 1 0 2 1 0 2 2139.3 17505 1992 16841 40518;40519 46939;46940 46940 2 SHWDDGTNDSDLEK Deamidation (N) 1618.6383 0.63832377 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 2.5 0.5 1 1 49.745 49.745 3 6.857E-05 16097 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.769 60.739 0 0 0 0 46.111 58.38 0 0 0 0 46 56 0 0 0 0 1 1 2323.1 17506 510 16842 40520;40521 46941;46942 46941 137 2 SHWDDGTNDSDLEK Unmodified 1617.6543 0.65430819 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8.5 4.5 1 1 46.412 46.412 3 1.5324E-07 14363 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.95 93.586 138.45 107.36 84.494 49.243 198.17 103.08 130 111 83 46 195 102 2 2 1 1 2 2 14993 17507 510 16842 40522;40523 46943;46944 46944 2 SHYEEGPGK Unmodified 1002.4407 0.44067401 1403 P17665 Cox7c Cytochrome c oxidase subunit 7C, mitochondrial yes yes 0 0 0 0 8.25 4.76 1 1 2 30.525 30.525 3;4 1.0339E-06 6628 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 156.35 111.59 1008.4 296.95 1187.3 315.39 384.3 1019.9 947 336 1129 315 406 967 3 2 3 3 3 4 79929 17508 1403 16843 40524;40525;40526;40527 46945;46946;46947;46948 46947 4 SHYSNIEANESEEVR Unmodified 1762.7758 0.77582031 143 A0A0R4IZW8;O88456;A0A0R4J1C2 Capns1 Calpain small subunit 1 yes no 0 0 0 0 2.5 0.5 1 1 36.478 36.478 3 7.1833E-05 10196 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.578 62.111 39.4 0 50.655 0 27.594 49.315 37 0 47 0 28 47 2 0 2 0 1 1 12815 17509 143 16844 40528;40529 46949;46950 46949 2 SIAAATSALVK Unmodified 1030.6023 0.60226003 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 9 0 1 62.16 62.16 2 4.3585E-08 18905 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.7 78.511 0 0 0 49.256 54.316 58.146 0 0 0 46 56 56 0 0 0 1 1 1 5500.8 17510 287;1450 16845 40530 46951 46951 1 SIAAMLELSSIGGGGR Unmodified 1517.7872 0.78717704 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 10 0 1 81.919 81.919 3 0.00052674 25878 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.148 34.615 39.701 0 0 41.534 0 0 37 0 0 38 0 0 1 0 0 1 0 0 3368.5 17511 2226 16846 40531 46952 46952 1 SIAELVPK Unmodified 855.50657 0.50656873 1606 P51863 Atp6v0d1 V-type proton ATPase subunit d 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 63.886 63.886 2 0.0037439 20556 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.62 74.783 843.41 698.97 664.24 648.47 582.39 832.98 793 710 673 621 597 797 6 5 4 3 3 5 141080 17512 1606 16847 40532;40533;40534;40535 46953;46954;46955;46956;46957;46958 46956 6 SIAFPSIGSGR Unmodified 1090.5771 0.57710791 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 0 9 0 1 62.566 62.566 2 0.00031506 19084 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.642 56.389 0 0 100.63 0 0 88.478 0 0 93 0 0 83 0 0 1 0 0 1 10195 17513 3296 16848 40536 46959 46959 1 SIALCVAACPR Unmodified 1216.6056 0.60564762 493 A2AMH3;A2AMH5;A2AMH4;Q6X893 Slc44a1 Choline transporter-like protein 1 yes no 0 0 0 0 9 0 1 55.86 55.86 2 0.021118 15926 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.722 34.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17514 493 16849 40537 46960 46960 1 SIATLMTDEVFHDVAYK Unmodified 1938.9397 0.93971451 602 B1AWV9;Q5DTL9 Slc4a10 Anion exchange protein;Sodium-driven chloride bicarbonate exchanger yes no 0 0 0 0 7 1 1 1 84.099 84.099 3 0.0034501 29968 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.083 26.487 14.905 13.758 7.9443 20.048 13.04 19.882 14 14 9 19 14 19 1 1 1 1 1 1 2256.1 17515 602 16850 40538;40539 46961;46962 46962 2 SICTTVLELLDK Unmodified 1390.7378 0.73776723 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 91.997 91.997 2;3 9.3977E-09 33474 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.77 69.003 0 244.41 303 286.16 272.8 382.37 0 232 297 279 274 366 0 4 5 5 5 6 104390 17516 1005 16851 40540;40541;40542;40543;40544 46963;46964;46965;46966;46967;46968;46969;46970;46971 46964 9 SICTTVLELLDKYLIANATNPESK Unmodified 2692.3993 0.39933305 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 10.5 0.5 1 1 104.93 104.93 4 1.5815E-35 33550 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 140.88 115.98 0 0 0 15 19 0 0 0 0 15 19 0 0 0 0 1 1 0 5949.9 17517 1005 16852 40545;40546 46972;46973;46974 46972 3 SIDDEVVEQR Unmodified 1188.5622 0.5622457 2449 Q8BRK8 Prkaa2 5'-AMP-activated protein kinase catalytic subunit alpha-2 yes yes 0 0 0 0 2 0 1 46.076 46.076 2 0.0015465 14406 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 90.108 62.583 39.564 27.124 0 30.079 27.906 0 37 28 0 28 28 0 1 1 0 1 1 0 2359 17518 2449 16853 40547 46975 46975 1 SIDDLEDELYAQK Unmodified 1537.7148 0.71478318 1656 Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 4 0.816 1 1 1 75.937 75.937 3 0.00053601 28573 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.498 46.071 29.607 8.3006 96.758 96.595 104.51 147.86 28 9 94 92 103 140 2 1 3 2 2 3 7220.7 17519 1656 16854 40548;40549;40550 46976;46977;46978;46979 46976 4 SIDDLEDQLYHQLEQNR Unmodified 2114.9869 0.98687572 905;1106;906 E9Q452;E9Q453;G5E8R0 Tpm1 no no 0 0 0 0 4.33 0.471 2 1 79.075 79.075 3;4 7.1036E-39 29656 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 155.03 126.25 50.022 36.74 57.397 87.525 122.84 28.772 47 37 56 85 121 28 2 1 2 4 4 1 27612 17520 905;906;1106 16855 40551;40552;40553 46980;46981;46982;46983;46984 46983 5 SIDDLEDQLYHQLEQNRR Unmodified 2271.088 0.087986745 905;1106;906 E9Q452;E9Q453;G5E8R0 Tpm1 no no 0 0 0 1 5 0.816 1 1 1 72.172 72.172 4 1.882E-05 26364 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.646 46.909 44.651 85.994 22.181 73.027 94.811 43.686 42 84 23 69 93 42 2 3 1 2 2 2 27915 17521 905;906;1106 16856 40554;40555;40556 46985;46986;46987 46985 3 SIDDLEEK Unmodified 947.44476 0.44475633 1107 G5E8R1 Tpm1 no no 0 0 0 0 3 0 1 54.072 54.072 2 0.032795 18544 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.563 13.809 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17522 1107 16857 40557 46988 46988 1 SIDLPIQSSLYR Unmodified 1390.7456 0.7456298 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 7.5 0.5 1 1 70.758 70.758 2 7.6785E-13 24337 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.88 79.462 48.834 74.47 58.24 39.056 73.632 97.037 46 74 56 37 74 93 1 2 1 1 1 2 21814 17523 1581 16858 40558;40559 46989;46990 46989 2 SIDLVSSVDGTPSLPVSLSWVR Unmodified 2313.2216 0.22162668 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0.816 1 1 1 92.65 92.65 3 2.1724E-09 32962 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.19 41.376 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 6702.5 17524 570 16859 40560;40561;40562 46991;46992;46993 46993 3 SIDNGIFVQLVQANSPASLVGLR Unmodified 2397.3016 0.30160833 483 A2AKJ9;A2AKJ6;H3BLG5;Q3TMX0;O08992 Sdcbp Syntenin-1 yes no 0 0 0 0 10 0.816 1 1 1 95.753 95.753 3;4 1.2207E-07 31141 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.681 26.639 9 24.159 18.72 8.7213 0 0 9 23 19 9 0 0 1 1 1 1 0 0 3697.3 17525 483 16860 40563;40564;40565 46994;46995;46996 46996 3 SIDNGIFVQLVQANSPASLVGLR Deamidation (N) 2398.2856 0.28562392 483 A2AKJ9;A2AKJ6;H3BLG5;Q3TMX0;O08992 Sdcbp Syntenin-1 yes no 0 1 0 0 9 0 1 97.24 97.24 3 5.6426E-12 34843 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.693 52.9 0 19.892 19.365 0 19.874 0 0 19 19 0 19 0 0 1 1 0 1 0 1660.8 17526 483 16860 40566 46997 46997 119 1 SIDQAFLQFFGDEFLR Unmodified 1931.9418 0.94176342 2511 Q8C8N2 Scai Protein SCAI yes yes 0 0 0 0 11 2 1 1 106.73 106.73 3 0.00060357 37138 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.322 42.945 20.344 8.566 0 20.767 0 9.594 19 9 0 19 0 9 2 1 0 1 0 1 2992.4 17527 2511 16861 40567;40568 46998;46999 46998 2 SIEEACFTLQYLNK Deamidation (N) 1715.8076 0.80763771 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 1 0 0 8 0 1 77.837 77.837 2 1.7389E-09 27045 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.681 50.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17528 1382 16862 40569 47000 47000 448 1 SIEEACLTLQHLNR Unmodified 1682.841 0.84100352 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 6.5 0.5 1 1 59.912 59.912 3 2.1028E-29 19191 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 157.2 137.1 137.31 167.71 43.256 79.386 163.71 182.94 129 167 46 74 166 176 2 2 1 1 2 2 28291 17529 510 16863 40570;40571 47001;47002 47002 2 SIEEVHK Unmodified 840.43413 0.43413207 771 D3Z3R3;P97930 Dtymk Thymidylate kinase yes no 0 0 0 0 5 0 1 38.845 38.845 3 0.03793 10592 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.679 19.601 49.026 65.854 0 90.719 0 0 46 65 0 83 0 0 1 1 0 1 0 0 2749.2 17530 771 16864 40572 47003 47003 1 SIEHLDK Unmodified 840.43413 0.43413207 2740 Q91VH6 Memo1 Protein MEMO1 yes yes 0 0 0 0 5 0 1 40.652 40.652 3 0.064313 11490 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.447 16.922 0 0 26.793 78.625 35.09 0 0 0 28 74 37 0 0 0 1 1 1 0 1384.3 17531 2740 16865 40573 47004 47004 1 SIEIESSDVIR Acetyl (Protein N-term) 1288.6511 0.65106071 1992 Q3UKJ7 Smu1 WD40 repeat-containing protein SMU1;WD40 repeat-containing protein SMU1, N-terminally processed yes yes 1 0 0 0 1 0 1 67.161 67.161 2 1.3673E-07 22593 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.465 53.394 20.319 13.526 0 0 0 9.594 19 14 0 0 0 9 1 1 0 0 0 1 3559.5 17532 1992 16866 40574 47005 47005 1 SIELDGTFVGTEVPGELGALGTGPAEAR Unmodified 2742.3712 0.37120404 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 5.83 3.24 3 2 1 85.32 85.32 3;4 1.8339E-30 32325 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.573 72.266 0 0 20.558 56 14 9.594 0 0 19 56 14 9 0 0 1 2 1 1 18515 17533 2619 16867 40575;40576;40577;40578;40579;40580 47006;47007;47008;47009;47010;47011 47010 6 SIELDVSDGPDNEPILCNR Unmodified 2141.9899 0.98991218 2005 Q3USB7 Plcl1 Inactive phospholipase C-like protein 1 yes yes 0 0 0 0 3.5 0.5 1 1 70.044 70.044 3 1.4888E-22 25911 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.16 89.931 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1578.2 17534 2005 16868 40581;40582 47012;47013 47012 2 SIELEHFEER Unmodified 1287.6095 0.60953025 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6;A0A0A6YX33 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 0 4 0 1 50.94 50.94 3 0.00084393 16720 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.513 49.609 20.16 0 38.232 38.162 0 0 19 0 37 37 0 0 1 0 1 1 0 0 4411 17535 67 16869 40583 47014 47014 1 SIELESVR Unmodified 931.49746 0.4974606 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 5 0 1 50.387 50.387 2 0.0013051 16224 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.79 55.505 251.84 192.69 250.63 279.56 265.02 254.67 237 201 255 274 274 246 1 1 1 1 1 1 55306 17536 154 16870 40584 47015 47015 1 SIEPYLK Unmodified 848.46437 0.46436956 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 57.943 57.943 2;3 0.0055049 19134 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.614 10.575 441.12 402.61 359.87 98.449 500.99 265.59 415 412 347 93 492 258 2 2 1 1 2 1 43422 17537 2918 16871 40585;40586;40587 47016;47017;47018 47016 3 SIEQLEK Unmodified 845.44945 0.44944778 1368 P13707;E0CXN5 Gpd1 Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] yes no 0 0 0 0 5 0 1 51.459 51.459 2 0.027327 16668 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.374 5.7577 108.04 108.42 143.64 90.563 134.23 204.04 102 111 143 93 139 195 1 1 1 1 1 1 18140 17538 1368 16872 40588 47019 47019 1 SIEQSIEQEEGLNR Unmodified 1630.7798 0.77984305 1197 O35526;D6RFB9 Stx1a Syntaxin-1A yes no 0 0 0 0 4.17 4.06 1 2 1 1 1 58.81 58.81 2;3 8.5682E-81 20248 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 219.74 156.66 138.79 261.63 281.7 253.7 262.76 175.71 130 256 279 252 261 167 4 6 4 8 4 4 131390 17539 1197 16873 40589;40590;40591;40592;40593;40594 47020;47021;47022;47023;47024;47025;47026;47027 47023 8 SIEQSIEQEEGLNR Deamidation (N) 1631.7639 0.76385864 1197 O35526;D6RFB9 Stx1a Syntaxin-1A yes no 0 1 0 0 2 0.816 1 1 1 60.666 60.666 3 1.5262E-14 21551 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.54 75.22 40.504 18.848 29.347 39.651 7.1186 69.087 38 19 28 38 9 65 2 1 1 2 1 2 8328.6 17540 1197 16873 40595;40596;40597 47028;47029;47030 47030 323 3 SIESETVR Unmodified 919.46108 0.4610751 1211 O35857 Timm44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 0 4 0 1 36.392 36.392 2 0.046267 9822 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.156 29.907 68.716 72.236 111.68 84.063 0 88.478 65 74 111 83 0 83 1 1 1 1 0 1 5988 17541 1211 16874 40598 47031 47031 1 SIFCPLMSFR Unmodified 1256.6046 0.60458499 2726 Q91V09;S4R225 Wdr13 WD repeat-containing protein 13 yes no 0 0 0 0 1 0 1 81.335 81.335 2 0.011284 28367 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.654 35.567 29.782 17.722 29.083 0 28.291 29.041 28 19 28 0 28 28 1 1 1 0 1 1 3337.7 17542 2726 16875 40599 47032 47032 1 SIFDHIK Unmodified 858.45995 0.45995289 23 A0A087WRN1;A0A087WQA0;F8WI22;Q8K019 Bclaf1 Bcl-2-associated transcription factor 1 yes no 0 0 0 0 8 0 1 55.54 55.54 3 0.048696 16450 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.59 8.2876 69.106 63.606 53.496 65.798 109.46 105.61 65 65 56 65 111 102 1 1 1 1 1 1 5822 17543 23 16876 40600 47033 47033 1 SIFKPFIFVDDVK Unmodified 1553.8494 0.84936659 3001 Q9CZC8;A0A0N4SWD0 Scrn1 Secernin-1 yes no 0 0 0 1 11 0.707 1 2 1 84.183 84.183 3;4 0.00021152 26318 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.461 47.259 187.48 653.49 444.02 309.2 506.07 268.15 176 629 429 288 494 260 2 6 4 3 5 5 96005 17544 3001 16877 40601;40602;40603;40604 47034;47035;47036;47037;47038;47039;47040;47041;47042;47043 47039 10 SIFLFLDR Unmodified 1009.5597 0.55966693 419 A2A432;E9PXY1;J3QJX0 Cul4b Cullin-4B no no 0 0 0 0 11 0 1 84.7 84.7 2 0.014296 26525 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.676 37.172 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 4873.2 17545 419 16878 40605 47044 47044 1 SIFNMANKK Oxidation (M);2 Deamidation (N) 1069.5114 0.51139611 460 A2AFR3 Frmpd4 FERM and PDZ domain-containing protein 4 yes yes 0 2 1 1 6.5 5.5 1 1 72.52 72.52 2 0.0045166 18702 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.917 11.314 0 39.368 0 0 67.99 0 0 37 0 0 65 0 0 1 0 0 1 0 16510 17546 460 16879 40606;40607 47045;47046 47046 116;117 22 2 SIFPGGGDK Unmodified 876.43413 0.43413207 2106 Q61036;A3KGC5;A3KGC4;A3KGC3 Pak3 Serine/threonine-protein kinase PAK 3 yes no 0 0 0 0 13 0 1 54.413 54.413 2 0.021823 18484 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.419 12.715 87.724 100.28 139.42 101.33 98.07 115.53 83 102 139 102 102 111 1 1 1 1 1 1 5714.8 17547 2106 16880 40608 47047 47047 1 SIFPIHPSFR Unmodified 1199.6451 0.64512789 2521 Q8CC88 Vwa8 von Willebrand factor A domain-containing protein 8 yes yes 0 0 0 0 11 0 1 60.607 60.607 3 0.029734 15937 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.802 14.978 0 0 68.711 36.346 0 0 0 0 65 37 0 0 0 0 1 1 0 0 3690.1 17548 2521 16881 40609 47048 47048 1 SIFQHIQSAQSQR Unmodified 1528.7746 0.77463852 2037 Q569Z6;Q8BZN7;F6YSQ2 Thrap3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 0 10.5 0.5 1 1 46.066 46.066 3 0.0010487 10188 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.167 40.583 39.701 20.216 0 0 29.288 20.254 37 19 0 0 28 19 1 1 0 0 1 1 9358.4 17549 2037 16882 40610;40611 47049;47050 47049 2 SIFQPCLSGPPPLLLPTIVTTPR Unmodified 2503.3873 0.38725222 973 E9QP09;S4R1Y1 Cul9 yes no 0 0 0 0 12 0 1 97.194 97.194 3 0.0037628 27797 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 37.938 24.618 0 0 0 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 1754.7 17550 973 16883 40612 47051 47051 1 SIFTVCLDK Unmodified 1081.5478 0.54778161 1129 P47934;H7BX88 Crat Carnitine O-acetyltransferase yes no 0 0 0 0 9 0 1 72.278 72.278 2 0.058941 23732 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.066 16.344 0 0 29.01 28.875 0 0 0 0 28 28 0 0 0 0 1 1 0 0 3810.3 17551 1129 16884 40613 47052 47052 1 SIFVTCGDWDLK Unmodified 1439.6755 0.67550132 210 A0A0R4J1R9;Q8C460 Eri3 ERI1 exoribonuclease 3 yes no 0 0 0 0 8 0 1 78.412 78.412 2 0.0076308 27294 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.699 24.833 0 0 0 40.441 0 20.254 0 0 0 37 0 19 0 0 0 1 0 1 1741.8 17552 210 16885 40614 47053 47053 1 SIGAAAK Unmodified 616.35443 0.35442518 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 10 2.16 1 1 1 38.127 38.127 2 0.01962 8114 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.66 32.348 205.74 54.9 174.51 254.41 343.79 309.45 192 56 167 247 350 296 2 1 1 2 3 2 55236 17553 1957 16886 40615;40616;40617 47054;47055;47056 47055 3 SIGQWYGPNTVAQVLK Unmodified 1759.9257 0.92571943 10 A0A087WNY2;A0A0R4J065;Q8BGE6 Atg4b Cysteine protease ATG4B yes no 0 0 0 0 9.5 0.5 1 1 78.754 78.754 3 0.0020325 24453 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.729 28.622 108.86 27.124 76.318 137.54 0 78.884 102 28 74 130 0 74 2 1 1 2 0 1 7740.6 17554 10 16887 40618;40619 47057;47058 47058 2 SIGSLPEREPSASTSQK Unmodified 1772.8905 0.89045614 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 1 6 0 1 44.898 44.898 3 1.7623E-06 12953 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.317 55.127 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 4823.2 17555 1999 16888 40620 47059 47059 1 SIHNLGTILTTNAVASETVATGEGLR Unmodified 2624.377 0.37695812 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 8 0 1 72.226 72.226 4 0.057561 24379 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 23.19 13.378 0 59.584 0 91.812 0 0 0 56 0 84 0 0 0 1 0 1 0 0 4403.5 17556 3195 16889 40621 47060 47060 1 SIHTLLQNLAK Unmodified 1236.719 0.71902112 1384 P15209 Ntrk2 BDNF/NT-3 growth factors receptor yes yes 0 0 0 0 12 0 1 65.342 65.342 3 6.4605E-10 16036 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.81 92.82 168.93 0 101.21 186.34 0 127.92 158 0 102 176 0 120 1 0 1 1 0 1 11930 17557 1384 16890 40622 47061 47061 1 SIIDEFLHINDFK Unmodified 1589.809 0.80895834 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3;A2AMI7 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 8 0 1 89.907 89.907 3 0.055708 32603 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.685 18.809 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 1222.1 17558 133 16891 40623 47062 47062 1 SIIFANYIAR Unmodified 1166.6448 0.64479354 2203 Q6NTA4;Q80X95;G3UYP1 Rragb;Rraga Ras-related GTP-binding protein B;Ras-related GTP-binding protein A yes no 0 0 0 0 6.5 5.5 1 1 71.323 71.323 2 0.003026 18151 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.358 38.591 172.59 99.071 124.18 95.589 161.16 113.73 162 106 125 97 162 111 2 2 2 2 2 2 28534 17559 2203 16892 40624;40625 47063;47064 47064 2 SIIGFFVECFR Unmodified 1373.6802 0.68019277 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 6.5 5.5 1 1 97.594 97.594 2 1.2201E-05 27473 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 105.17 77.152 0 23.033 22.422 20.767 23.385 35.577 0 22 22 19 23 34 0 2 2 1 1 3 5407.1 17560 2322 16893 40626;40627 47065;47066;47067 47067 3 SIIGVIPYFPYSK Unmodified 1482.8123 0.8122528 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 6.25 5.26 2 1 1 87.864 87.864 3 0.00010725 27785 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.18 62.325 114.32 132.98 107.48 152.91 124.01 225.89 107 130 111 144 125 213 3 2 3 4 3 4 34282 17561 2671 16894 40628;40629;40630;40631 47068;47069;47070;47071;47072;47073 47072 6 SIITSATPLISSPLK Unmodified 1526.892 0.89195969 3450;8 A0A087WNU5;S4R2K9 Ank3 no no 0 0 0 0 11 0 1 76.667 76.667 3 0.029944 23069 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.029 9.9047 79.402 0 0 68.921 112.94 0 74 0 0 65 111 0 1 0 0 1 1 0 5402.4 17562 8;3450 16895 40632 47074 47074 1 SIITYVSSLYDAMPR Unmodified 1714.86 0.86000763 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 8 4.97 1 1 1 95.04 95.04 3 4.8879E-17 27021 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.96 96.954 21.311 50.909 13.379 32.409 35.967 45.878 20 49 14 31 37 44 2 3 1 3 3 4 7904.7 17563 3266 16896 40633;40634;40635 47075;47076;47077;47078 47077 4 SIKETICSQDER Unmodified 1464.6879 0.68785692 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 1 7 0 1 45.355 45.355 3 0.051196 12433 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.382 24.55 0 0 40.034 0 37.384 38.375 0 0 37 0 37 37 0 0 1 0 1 1 2208.6 17564 3336 16897 40636 47079 47079 1 SILAAIGAYPLSR Unmodified 1330.7609 0.76088593 3139 Q9DCA7 Caly Neuron-specific vesicular protein calcyon yes yes 0 0 0 0 1 0 1 80.203 80.203 2 0.00031475 27888 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.632 43.377 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17565 3139 16898 40637 47080 47080 1 SILCCLR Unmodified 920.45719 0.45719247 3304 Q9R0Q7;D3Z7C6 Ptges3 Prostaglandin E synthase 3 yes no 0 0 0 0 10 0 1 56.713 56.713 2 0.027412 14442 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.35 46.226 117.74 107.87 137.37 133.9 0 127.92 111 111 139 130 0 120 1 1 1 1 0 1 32170 17566 3304 16899 40638 47081 47081 1 SILDQHDVR Unmodified 1081.5516 0.55162144 3113 Q9DB60;B1AS14 Fam213b Prostamide/prostaglandin F synthase yes no 0 0 0 0 5.5 0.5 1 1 40.238 40.238 3 0.00018018 11270 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.06 77.244 227.5 296.96 221.8 231.07 157.62 263.67 214 297 223 222 158 250 3 5 3 3 2 3 10093 17567 3113 16900 40639;40640 47082;47083;47084;47085;47086 47083 5 SILFVPTSAPR Unmodified 1186.671 0.67100829 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 8 4.97 1 1 1 66.454 66.454 2 5.3537E-14 18342 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 157.99 88.818 396.2 0 496.51 273.78 18.486 494.1 372 0 472 273 19 464 3 0 3 2 1 3 77898 17568 1324 16901 40641;40642;40643 47087;47088;47089 47088 3 SILLSVPLLVVDNK Unmodified 1508.9178 0.91778051 1043 F8WHL2;Q8CIE6 Copa Coatomer subunit alpha;Coatomer subunit alpha;Xenin;Proxenin yes no 0 0 0 0 11.5 0.5 1 1 95.068 95.068 3 0.0013802 27280 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.034 43.355 39.429 8.2964 38.69 17.926 48.339 0 37 9 37 19 47 0 2 1 1 1 2 0 16416 17569 1043 16902 40644;40645 47090;47091 47091 2 SILPTAPR Unmodified 853.50215 0.50215205 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 0 9 0 1 49.86 49.86 2 0.010536 13025 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.093 61.844 287.28 108.65 317.06 257.63 0 422.14 270 111 311 253 0 396 2 1 2 2 0 2 15631 17570 2377 16903 40646 47092;47093 47092 2 SILTEQLETIPK Unmodified 1370.7657 0.76569654 1424 P20357;G3UZV6;G3UWW1 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 7 0.816 1 1 1 72.195 72.195 2;3 9.172E-18 24941 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.16 93.447 137.91 185.72 108.93 103.8 119.65 125.57 130 185 112 102 121 121 3 3 2 2 2 2 24063 17571 1424 16904 40647;40648;40649 47094;47095;47096 47095 3 SILTEQLETIPKEER Unmodified 1784.952 0.95199376 1424 P20357;G3UZV6;G3UWW1 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 8.33 3.3 2 1 63.265 63.265 3;4 1.2501E-30 21746 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 141.06 118.76 24.415 0 114.67 21.999 103.84 53.612 23 0 107 23 102 51 1 0 2 1 2 1 13520 17572 1424 16905 40650;40651;40652 47097;47098;47099 47098 3 SINNAEK Unmodified 774.38718 0.38718187 1052 F8WJ41;P62245;D3YVB4;D3Z712 Rps15a 40S ribosomal protein S15a yes no 0 0 0 0 5 0 1 35.205 35.205 3 0.032748 8832 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.547 21.298 29.761 0 47.508 47.447 0 88.478 28 0 46 46 0 83 1 0 1 1 0 1 1398.3 17573 1052 16906 40653 47100 47100 1 SINPDEAVAYGAAVQAAILMGDK Unmodified 2303.1467 0.14674718 1407;1394 Q61696;P17879;P16627 Hspa1a;Hspa1b;Hspa1l Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 7 0 1 96.152 96.152 3 1.7242E-05 35415 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.077 30.999 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17574 1407;1394 16907 40654 47101 47101 1 SINPDEAVAYGAAVQAAILSGDK Unmodified 2259.1383 0.13829098 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 9.17 2.79 1 1 2 2 92.014 92.014 3;4 6.4328E-28 34207 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.78 110.06 284.98 172.47 351.49 210.24 320.46 177.88 268 174 341 206 320 170 8 5 9 6 8 5 185650 17575 1762 16908 40655;40656;40657;40658;40659;40660 47102;47103;47104;47105;47106;47107;47108;47109;47110;47111;47112;47113 47105 12 SINSILDYISTSK Unmodified 1439.7508 0.75077476 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 0 10 0.816 1 1 1 86.307 86.307 2;3 1.087E-06 27681 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.22 82.123 29.872 38.922 55.527 57.899 0 29.848 28 37 56 56 0 28 1 1 2 2 0 1 25406 17576 1692 16909 40661;40662;40663 47114;47115;47116 47115 3 SIPADNQIK Unmodified 984.52401 0.52400971 2180 Q64669 Nqo1 NAD(P)H dehydrogenase [quinone] 1 yes yes 0 0 0 0 6 0 1 47.007 47.007 3 0.040683 14035 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.19 14.666 49.131 0 38.115 37.512 34.963 58.698 46 0 37 37 37 56 1 0 1 1 1 1 12095 17577 2180 16910 40664 47117 47117 1 SIPAVLEIPSK Unmodified 1152.6754 0.67542497 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 0 9 2.35 1 2 1 72.933 72.933 2;3 9.1222E-13 24753 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 143.5 112.08 148.49 77.385 190.9 89.581 274.59 229.88 139 74 181 83 274 223 2 1 2 1 3 3 62698 17578 3042 16911 40665;40666;40667;40668 47118;47119;47120;47121 47120 4 SIPAVLEIPSKEHPYDAAK Unmodified 2064.0892 0.089155943 3042 Q9D1K2;A0A0N4SVE1;F7B2B4 Atp6v1f V-type proton ATPase subunit F yes no 0 0 0 1 7.5 0.5 1 1 63.848 63.848 4 6.1745E-07 20245 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.168 63.985 177.78 194.28 72.512 76.56 0 59.696 167 195 74 74 0 56 2 2 1 1 0 1 26736 17579 3042 16912 40669;40670 47122;47123 47123 2 SIPAYLAETLYYAMK Unmodified 1732.8746 0.87459506 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 11 0.816 1 1 1 101.58 101.58 3 1.0138E-07 33525 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.42 84.211 88.828 18.196 0 44.197 69.745 53.432 86 19 0 41 72 51 3 1 0 2 3 2 23414 17580 1577 16913 40671;40672;40673 47124;47125;47126;47127;47128 47125 5 SIPDAMNLILFLATEK Unmodified 1774.9539 0.95390802 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 12 0.816 1 1 1 113.74 113.74 3 1.0379E-12 44805 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.388 64.855 16.05 23.824 0 9.6683 29.89 0 15 23 0 9 29 0 2 2 0 1 3 0 4589.4 17581 2235 16914 40674;40675;40676 47129;47130;47131;47132 47132 4 SIPDGSEK Unmodified 831.39741 0.39741221 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.5 3.28 2 1 1 41.4 41.4 2 0.0062455 12004 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.71 49.124 0 0 286.75 48.019 289.2 451.19 0 0 267 46 290 431 0 0 2 1 1 2 34709 17582 1055 16915 40677;40678;40679;40680 47133;47134;47135;47136 47136 4 SIPDGTEHGDFLALDLGGTNFR Unmodified 2331.1131 0.11313886 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 6.67 2.98 1 2 1 1 1 75.822 75.822 3;4 9.218E-35 27530 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 137.09 111.53 158.39 236.33 197.62 249.05 371.34 203.52 149 232 195 241 371 196 6 7 5 7 8 4 76291 17583 1055 16916 40681;40682;40683;40684;40685;40686 47137;47138;47139;47140;47141;47142;47143;47144;47145;47146 47143 10 SIPHITSDR Unmodified 1024.5302 0.53015772 1850 P97427 Crmp1 Dihydropyrimidinase-related protein 1 yes yes 0 0 0 0 6.5 0.5 1 1 39.098 39.098 3 0.002453 10251 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.243 46.684 88.692 72.756 0 40.441 0 69.29 83 74 0 37 0 65 2 2 0 1 0 1 11520 17584 1850 16917 40687;40688 47147;47148 47147 2 SIPICTLK Unmodified 930.52084 0.52083858 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 10 0.707 1 2 1 60.668 60.668 2;3 0.0014151 16339 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.04 50.366 435.07 494.17 216.58 250.81 555.43 504.81 408 491 213 241 556 482 5 5 2 3 5 4 123050 17585 1876 16918 40689;40690;40691;40692 47149;47150;47151;47152;47153;47154 47150 6 SIPLDEGEDEAQR Unmodified 1457.6634 0.66341631 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 2 0.816 1 1 1 49.624 49.624 2;3 1.1621E-10 14790 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.39 71.538 40.686 20.665 0 6.558 9 20.254 38 22 0 6 9 19 1 2 0 1 1 1 23154 17586 3204 16919 40693;40694;40695 47155;47156;47157 47155 3 SIPLDEGEDEAQRR Unmodified 1613.7645 0.76452734 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 2.5 0.5 1 1 43.639 43.639 3 0.00013744 13414 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.073 56.234 39.468 95.863 25.588 38.916 38.702 39.442 37 93 28 37 37 37 1 2 1 1 1 1 17344 17587 3204 16920 40696;40697 47158;47159 47158 2 SIPMTVDFIR Unmodified 1177.6165 0.61652988 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 8 0 1 73.427 73.427 2 0.013453 24857 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.48 13.322 69.468 54.9 0 60.214 52.823 86.971 65 56 0 56 56 83 1 1 0 1 1 1 8417.3 17588 1295 16921 40698 47160 47160 1 SIPVLAK Unmodified 726.46398 0.46397563 3050 Q9D2M8;A6X925;B2KF55 Ube2v2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 0 10 0 1 59.096 59.096 2 0.027814 15564 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.029 36.341 138.05 106.25 152.02 144.83 186.05 175.91 130 111 153 144 190 170 1 1 1 1 1 1 52634 17589 3050 16922 40699 47161 47161 1 SIQADGLVWGSSK Unmodified 1346.683 0.68302954 1247 O70251;A0A087WS46 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 0 7.33 0.471 2 1 66.57 66.57 2;3 3.4376E-13 21646 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.09 62.803 118.38 129.08 75.39 0 207.47 172.1 111 130 74 0 204 167 2 3 2 0 3 3 20205 17590 1247 16923 40700;40701;40702 47162;47163;47164 47164 3 SIQCLTVHR Unmodified 1112.5761 0.57606205 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 9.75 2.38 1 1 1 1 41.341 41.341 3 0.00024935 9749 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.05 63.475 368.75 307.78 457.23 379.89 203.45 716.94 347 318 457 376 207 678 2 2 3 3 1 3 35534 17591 1263 16924 40703;40704;40705;40706 47165;47166;47167;47168 47166 4 SIQEIQELDKDDESLR Unmodified 1916.9327 0.93271488 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 1 6.25 3.96 1 1 1 1 61.394 61.394 3 5.0829E-41 21431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 163.41 133.08 278.25 297.24 359.78 375.25 260.27 529.84 261 297 362 362 260 504 2 3 3 3 2 4 128700 17592 2889 16925 40707;40708;40709;40710 47169;47170;47171;47172 47171 4 SIQFVDWCPTGFK Unmodified 1583.7442 0.74424959 1313;44 A0A0A0MQA5;P68368;P05213 Tuba4a;Tuba1b Tubulin alpha-4A chain;Tubulin alpha-1B chain no no 0 0 0 0 9.22 3.36 2 3 4 3 1 2 3 81.434 81.434 2;3;4 2.2932E-21 28566 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.15 127.63 2393.8 2207.4 1414.2 2627.4 3070.6 2594.7 2248 2235 1418 2522 3114 2501 13 12 8 15 11 13 2922100 17593 44;1313 16926 40711;40712;40713;40714;40715;40716;40717;40718;40719;40720;40721;40722;40723;40724;40725;40726;40727;40728 47173;47174;47175;47176;47177;47178;47179;47180;47181;47182;47183;47184;47185;47186;47187;47188;47189;47190;47191 47175 19 SIQGDGEGDGDLK Unmodified 1289.5735 0.57353867 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 4.5 3.28 1 3 3 1 47.225 47.225 2;3 1.1697E-27 15169 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 178.22 127.16 463.1 502.41 607.41 305.37 620.42 520.38 436 510 599 306 621 501 6 8 9 6 8 6 149520 17594 1478 16927 40729;40730;40731;40732;40733;40734;40735;40736 47192;47193;47194;47195;47196;47197;47198;47199;47200;47201;47202 47193 11 SIQHHLR Unmodified 889.48823 0.48823332 2953 Q9CR26;F8WJC2;F6W5Q8 Vta1 Vacuolar protein sorting-associated protein VTA1 homolog yes no 0 0 0 0 7.5 0.5 1 1 23.065 23.065 3 0.0075194 3305 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.541 54.969 14.9 0 20.483 0 23.569 14.251 14 0 19 0 23 14 1 0 1 0 1 1 1093.3 17595 2953 16928 40737;40738 47203;47204 47204 2 SIQLDGLVWGASK Unmodified 1372.7351 0.73506511 203 A0A0R4J1E2;E9QN08;Q80T06;F6ZFU0;P57776;A0A0R4J1L2;Q91VK2;D3YY68 Eef1d Elongation factor 1-delta yes no 0 0 0 0 8 0 1 78.855 78.855 3 0.0063267 27460 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.823 26.502 39.701 0 0 40.441 0 0 37 0 0 37 0 0 1 0 0 1 0 0 4538.2 17596 203 16929 40739 47205 47205 1 SIQVDGK Unmodified 745.39702 0.39701828 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 6 0 1 45.163 45.163 2 0.014458 12995 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.5 44.23 137.84 145.6 153.94 170.32 161.23 163.83 130 148 158 167 167 158 1 1 1 1 1 1 17674 17597 1556 16930 40740 47206 47206 1 SISAPVIFDR Unmodified 1103.5975 0.597509 2978 Q9CWK8 Snx2 Sorting nexin-2 yes yes 0 0 0 0 8 0 1 64.709 64.709 2 0.012294 20806 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.582 26.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17598 2978 16931 40741 47207 47207 1 SISFIPPDGEFELMR Unmodified 1736.8444 0.84435757 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 10 3 1 1 84.507 84.507 2;3 0.00087687 30973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.414 39.276 0 0 0 112.24 17.982 88.478 0 0 0 103 19 83 0 0 0 3 1 2 7661 17599 1836 16932 40742;40743 47208;47209;47210 47209 3 SISMTTFTEPEVLFLQSR Unmodified 2085.0452 0.045242218 1912 Q3TBU7;Q3U2K8;Q80WC7 Agfg2 Arf-GAP domain and FG repeat-containing protein 2 yes no 0 0 0 0 8 0 1 89.848 89.848 3 0.025127 32559 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.858 12.018 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17600 1912 16933 40744 47211 47211 1 SISQQSGAR Unmodified 932.46756 0.46755746 99 A0A0G2JG00;Q3TUE1;A0A0G2JGW9;A0A0G2JFY5;Q3UUU2;Q91WJ8;A0A0G2JG96 Fubp1 Far upstream element-binding protein 1 yes no 0 0 0 0 5.5 0.5 1 1 25.664 25.664 2 0.00094832 4257 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.88 63.905 24.585 18.558 30.296 0 43.118 23.705 23 19 28 0 42 23 1 1 1 0 2 1 5913.8 17601 99 16934 40745;40746 47212;47213 47213 2 SISTSLPVLDLIDAIAPNAVR Unmodified 2164.2103 0.21033371 2018 Q3V0K9 Pls1 Plastin-1 yes yes 0 0 0 0 9 0 1 106.92 106.92 3 8.0303E-09 37155 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.505 58.913 0 0 4.0481 6.2828 1.8034 0 0 0 4 6 2 0 0 0 1 1 1 0 858.64 17602 2018 16935 40747 47214 47214 1 SISTSTK Unmodified 722.38103 0.38103386 93 A0A0G2JER9;O54946;F6YRQ2 Dnajb6 DnaJ homolog subfamily B member 6 yes no 0 0 0 0 7 0 1 36.612 36.612 2 0.0381 8321 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.809 38.582 88.644 82.335 0 119.24 110.63 0 83 83 0 111 111 0 1 1 0 1 1 0 7455.4 17603 93 16936 40748 47215 47215 1 SISYIQPNTVCFWDR Unmodified 1884.8829 0.88286834 1205 O35682 Myadm Myeloid-associated differentiation marker yes yes 0 0 0 0 8 0 1 76.294 76.294 3 0.00082937 26317 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.079 39.246 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 4458 17604 1205 16937 40749 47216 47216 1 SISYIQPNTVCFWDR Deamidation (N) 1885.8669 0.86688392 1205 O35682 Myadm Myeloid-associated differentiation marker yes yes 0 1 0 0 9 0 1 76.205 76.205 3 0.0096097 25544 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.319 32.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17605 1205 16937 40750 47217 47217 328 1 SITDIINIGIGGSDLGPLMVTEALKPYSK Unmodified 3001.6046 0.6045748 1316 P06745 Gpi Glucose-6-phosphate isomerase yes yes 0 0 0 1 10.7 1.41 2 3 2 2 103.54 103.54 4;5 1.2028E-18 34183 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.522 62.705 129.81 105.24 165.4 20.767 41.785 138.33 122 107 159 19 41 130 5 4 6 1 3 6 27873 17606 1316 16938 40751;40752;40753;40754;40755;40756;40757;40758;40759 47218;47219;47220;47221;47222;47223;47224;47225;47226;47227;47228 47224 11 SITHDIEEK Unmodified 1070.5244 0.52440364 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 4 0 1 43.703 43.703 3 0.00018894 13267 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.29 70.268 0 157.47 0 111.49 0 178.02 0 148 0 102 0 167 0 1 0 1 0 1 9861.3 17607 431 16939 40760 47229 47229 1 SITIANQTNCPLYVTK Unmodified 1821.9295 0.92948418 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 8.91 3.18 1 2 1 2 2 1 2 65.312 65.312 2;3;4 2.0811E-17 21093 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.21 91.052 819.31 1213.5 1155 1135 2016.7 949.23 771 1202 1175 1122 2009 917 7 7 7 7 11 9 645520 17608 1158 16940 40761;40762;40763;40764;40765;40766;40767;40768;40769;40770;40771 47230;47231;47232;47233;47234;47235;47236;47237;47238;47239;47240;47241 47234 12 SITIANQTNCPLYVTK Deamidation (N) 1822.9135 0.91349976 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 0 8 0 1 68.403 68.403 3 2.2934E-05 22516 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.609 55.556 0 50.008 0 30.604 0 29.848 0 47 0 28 0 28 0 1 0 1 0 1 11332 17609 1158 16940 40772 47242 47242 313 1 SITPETPTEIPCGDIR Unmodified 1784.8615 0.86146419 2091 Q60857 Slc6a4 Sodium-dependent serotonin transporter yes yes 0 0 0 0 4 0 1 60.388 60.388 3 0.0058904 21222 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.095 18.49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17610 2091 16941 40773 47243 47243 1 SITPNEK Unmodified 787.40758 0.40758296 2689 Q8VCX5;E9Q9E0;F6Z1Z9 Micu1 Calcium uptake protein 1, mitochondrial yes no 0 0 0 0 6 0 1 39.584 39.584 2 0.055448 10480 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.485 23.981 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17611 2689 16942 40774 47244 47244 1 SITVSALPFLR Unmodified 1202.7023 0.70230842 2110 Q61137;A0A0A6YWE6;Q3TPU9;A0A0A6YXJ4 Astn1 Astrotactin-1 yes no 0 0 0 0 11 0.816 1 1 1 79.349 79.349 2 0.0011913 24252 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.181 46.201 0 0 47.2 57.735 81.059 28.848 0 0 46 56 83 28 0 0 1 1 2 1 22041 17612 2110 16943 40775;40776;40777 47245;47246;47247 47246 3 SIVDYKPSLDLLEQQHQLIQEALIFDNK Unmodified 3296.7293 0.72925804 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 1 8 0 1 91.401 91.401 4 4.0472E-13 33140 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.99 60.107 0 9.3321 14.588 0 14.329 9.1851 0 9 14 0 14 9 0 1 1 0 1 1 2109.4 17613 310 16944 40778 47248 47248 1 SIVEGIIEEEEEDEEGSESVNKR Unmodified 2605.1879 0.18787953 2465 Q8BVQ5;A0A140LI84 Ppme1 Protein phosphatase methylesterase 1 yes no 0 0 0 1 3 0 1 72.615 72.615 4 3.6999E-15 27210 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.609 70.413 49.358 19.743 28.293 38.272 83.75 38.132 46 19 28 38 83 37 1 1 1 2 2 1 13187 17614 2465 16945 40779 47249;47250 47250 2 SIVEHVAAK Unmodified 952.53418 0.53418046 2866 Q99LS3 Psph Phosphoserine phosphatase yes yes 0 0 0 0 7 0 1 43.144 43.144 3 0.0092438 11302 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.563 32.228 59.862 44.908 0 0 45.451 77.587 56 46 0 0 46 74 1 1 0 0 1 1 3439.5 17615 2866 16946 40780 47251 47251 1 SIVGMTK Unmodified 734.39966 0.39966081 2978 Q9CWK8 Snx2 Sorting nexin-2 yes yes 0 0 0 0 9 0 1 51.501 51.501 2 0.040319 13833 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.116 16.274 59.333 33.724 98.303 0 113.18 85.248 56 37 93 0 111 83 1 1 1 0 1 1 5957.1 17616 2978 16947 40781 47252 47252 1 SIVLQAAVPK Unmodified 1024.6281 0.62808085 437 A2A9W7;Q8BMI3 Gga3 ADP-ribosylation factor-binding protein GGA3 yes no 0 0 0 0 10 0 1 62.359 62.359 3 0.0011334 17082 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.533 39.646 29.495 56.857 44.144 46.433 64.566 37.6 28 56 46 46 65 37 1 1 1 1 1 1 4353.9 17617 437 16948 40782 47253 47253 1 SIVNNGHSFNVEFDDSQDNAVLK 2 Deamidation (N) 2550.151 0.15104051 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 2 0 0 4 0 1 71.06 71.06 4 1.279E-09 25758 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.133 53.817 227.47 58.576 131.02 111.69 155.2 143.75 213 65 130 112 158 139 2 1 2 2 2 2 35147 17618 1296 16949 40783 47254;47255 47255 355;356 2 SIVNNGHSFNVEFDDSQDNAVLK Deamidation (N) 2549.167 0.16702493 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 1 0 0 5 0.707 1 2 1 70.309 70.309 3;4 1.2852E-34 25790 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.09 121.11 129.2 119.77 98.001 103.9 131.28 134.87 121 121 102 102 130 129 2 2 2 2 2 2 69962 17619 1296 16949 40784;40785;40786;40787 47256;47257;47258;47259 47258 355;356 4 SIVNNGHSFNVEFDDSQDNAVLK Unmodified 2548.183 0.18300934 1296 P00920;A0A0A6YX78 Ca2;Car2 Carbonic anhydrase 2 yes no 0 0 0 0 5.5 0.5 1 1 66.658 66.658 4 8.6952E-05 23788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.984 28.17 128.05 26.473 97.382 113.52 106.24 135.55 120 28 93 111 111 130 2 1 1 2 2 2 8750 17620 1296 16949 40788;40789 47260;47261 47260 2 SIVNYKPK Unmodified 947.54402 0.54401687 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 1 10 0 1 47.347 47.347 3 0.015349 10665 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.378 39.837 723.67 862.4 993.85 832.56 702.6 996.91 684 872 1004 828 741 954 1 1 1 1 1 1 61868 17621 418 16950 40790 47262 47262 1 SIVPTPVK Unmodified 839.51165 0.5116541 1532 P38060 Hmgcl Hydroxymethylglutaryl-CoA lyase, mitochondrial yes yes 0 0 0 0 8 0 1 54.746 54.746 2 0.013678 16099 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.794 43.67 49.128 45.631 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 0 4102.7 17622 1532 16951 40791 47263 47263 1 SIVSVGDPK Unmodified 900.49165 0.49164694 1099;2106 G5E884;O88643;Q61036;A3KGC5 Pak1;Pak3 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1;Serine/threonine-protein kinase PAK 3 no no 0 0 0 0 7 0.816 1 1 1 52.135 52.135 2;3 0.001762 14775 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.679 40.493 255.58 156.15 193.66 149.86 201.61 221.31 240 166 195 148 204 213 3 3 3 2 2 3 25107 17623 1099;2106 16952 40792;40793;40794 47264;47265;47266 47266 3 SIVVDLFHGQLR Unmodified 1382.767 0.76703394 1031 F8VPZ3;F6XDW8 Usp32 Ubiquitin carboxyl-terminal hydrolase yes no 0 0 0 0 10 0 1 71.446 71.446 3 0.002736 21232 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.967 25.798 59.91 0 29.994 0 29.288 0 56 0 28 0 28 0 1 0 1 0 1 0 2676.3 17624 1031 16953 40795 47267 47267 1 SIVVSPILIPENQR Unmodified 1563.8984 0.89844205 3323 Q9WTR5 Cdh13 Cadherin-13 yes yes 0 0 0 0 9 0 1 72.633 72.633 3 8.0982E-05 23901 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.753 59.899 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 7867 17625 3323 16954 40796 47268 47268 1 SIWSVSTPSPIK Unmodified 1300.7027 0.70270235 3450;8 A0A087WNU5;S4R2K9 Ank3 no no 0 0 0 0 10 0 1 69.476 69.476 3 0.0015035 20286 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.674 17.432 118.99 21.768 0 29.725 46.751 0 111 28 0 28 46 0 1 1 0 1 1 0 5505.4 17626 8;3450 16955 40797 47269 47269 1 SIYGEKFEDENFILK Unmodified 1830.904 0.90398093 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 1 8.11 2.77 1 2 2 2 2 72.585 72.585 3;4 1.1989E-41 25156 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 183 157.41 2333.9 1981 2633.2 2101.3 2423.9 1975.5 2195 2027 2634 2067 2463 1899 11 9 10 9 11 11 719220 17627 1404 16956 40798;40799;40800;40801;40802;40803;40804;40805;40806 47270;47271;47272;47273;47274;47275;47276;47277;47278;47279;47280;47281;47282 47274 13 SIYGEKFEDENFILK Deamidation (N) 1831.888 0.88799652 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 1 0 1 6 0 1 74.329 74.329 3 0.034756 26857 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.968 11.661 0 39.368 0 0 38.702 0 0 37 0 0 37 0 0 1 0 0 1 0 5138 17628 1404 16956 40807 47283 47283 500 1 SIYYITGESK Unmodified 1159.5761 0.57610486 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 9 2.1 1 2 1 1 60.114 60.114 2;3 7.8317E-20 20904 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.25 83.569 543.46 332.02 352.62 512.96 491.59 327.7 510 343 353 497 498 316 4 3 3 4 3 3 165810 17629 1354 16957 40808;40809;40810;40811;40812 47284;47285;47286;47287;47288 47288 5 SKAEAESLYQSK Unmodified 1339.662 0.66195975 657 CON__P04264 yes yes 0 0 0 1 7 0 1 49.641 49.641 3 3.2514E-08 14307 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.54 65.98 167.88 133.83 164.04 101.71 0 180.15 158 139 164 102 0 169 1 1 1 1 0 1 13105 + 17630 657 16958 40813 47289 47289 1 SKDFQLFSSPLGK Unmodified 1452.7613 0.76127986 2797 Q921I1;E9Q035;E9Q2Q7 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 1 9.75 0.829 2 1 1 69.024 69.024 3;4 0.00023747 22209 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.771 60.031 59.711 74.71 80.068 0 179.77 219.1 56 74 74 0 176 213 1 1 1 0 2 2 32413 17631 2797 16959 40814;40815;40816;40817 47290;47291;47292;47293 47290 4 SKEEAFDAICQLIAGK Unmodified 1778.8873 0.88728501 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 1 10.5 0.5 1 1 86.112 86.112 3 2.1853E-05 27645 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.85 40.08 29.697 66.705 27.078 19.153 0 20.254 28 65 28 19 0 19 1 2 1 1 0 1 6871.8 17632 2963 16960 40818;40819 47294;47295 47294 2 SKEEALELINGYIQK Unmodified 1733.92 0.91996535 3260 Q9QUR7 Pin1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 yes yes 0 0 0 1 9 0 1 78.121 78.121 3 0.026813 26475 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.647 25.019 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17633 3260 16961 40820 47296 47296 1 SKEEQELHDIHSTR Unmodified 1707.8176 0.81762554 1526 P35802 Gpm6a Neuronal membrane glycoprotein M6-a yes yes 0 0 0 1 4 0.816 1 1 1 36.138 36.138 5 5.8205E-05 9699 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.417 73.586 198.61 411.02 238.1 329.24 150.3 624.65 186 400 241 316 157 590 3 4 2 3 3 5 33263 17634 1526 16962 40821;40822;40823 47297;47298;47299;47300;47301 47299 5 SKEFAQVIK Unmodified 1048.5917 0.59169534 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 1 8 0 2 52.711 52.711 3;4 0.031375 15125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.368 11.011 571.48 312.81 528.22 92.416 695.88 568.57 537 326 512 93 688 552 2 1 2 1 2 2 36711 17635 1857 16963 40824;40825 47302;47303 47302 2 SKEPQLIAFYHK Unmodified 1459.7823 0.78234966 2114 Q61165 Slc9a1 Sodium/hydrogen exchanger 1 yes yes 0 0 0 1 9 0 1 55.93 55.93 4 0.016912 15970 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.062 25.189 0 116.21 113.13 0 0 127.92 0 111 111 0 0 120 0 1 1 0 0 1 4605.7 17636 2114 16964 40826 47304 47304 1 SKEQAELEAAR Unmodified 1230.6204 0.62042929 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 5 0 1 38.411 38.411 3 0.013957 10387 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.578 24.153 0 0 0 49.256 54.316 58.146 0 0 0 46 56 56 0 0 0 1 1 1 3352.6 17637 3266 16965 40827 47305 47305 1 SKESVPDFPLSPPK Unmodified 1526.7981 0.7980593 1619 P54227;D3Z5N2;D3Z1Z8 Stmn1 Stathmin yes no 0 0 0 1 8 0 1 61.928 61.928 3 0.027908 19418 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.297 22.047 0 67.89 75.995 0 0 59.696 0 65 74 0 0 56 0 1 1 0 0 1 15931 17638 1619 16966 40828 47306 47306 1 SKGGVVGIK Unmodified 843.5178 0.51780212 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 11.2 1.48 1 1 1 1 43.273 43.273 3 0.0086601 9008 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.399 25.76 812.87 2530.1 3539.4 2860.6 2429.6 2761.3 767 2485 3533 2852 2539 2638 2 3 3 3 3 2 309310 17639 1309 16967 40829;40830;40831;40832 47307;47308;47309;47310 47308 4 SKLPNSVLGK Unmodified 1041.6182 0.61824444 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 yes yes 0 0 0 1 11 0 1 51.673 51.673 3 0.00039778 12271 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.273 50.956 0 0 0 200 0 0 0 0 0 200 0 0 0 0 0 1 0 0 37807 17640 3271 16968 40833 47311 47311 1 SKLPNTVLGK Unmodified 1055.6339 0.63389451 3353 Q9WVK4 Ehd1 EH domain-containing protein 1 yes yes 0 0 0 1 11 0.816 1 1 1 52.267 52.267 3 0.0014974 12690 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.973 34.881 257.35 333.12 68.839 344.34 418.56 235.4 241 325 65 326 423 226 2 2 1 3 3 1 39200 17641 3353 16969 40834;40835;40836 47312;47313;47314 47312 3 SKLPTGK Unmodified 729.43849 0.43848916 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 1 10 0 1 39.541 39.541 3 0.052613 7594 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.224 21.798 315.71 164.2 360.76 0 0 349.65 297 180 344 0 0 328 1 1 1 0 0 1 34831 17642 2646 16970 40837 47315 47315 1 SKLTNVATSVSNK Unmodified 1347.7358 0.73579339 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 1 11 0 1 49.405 49.405 3 0.007143 11398 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.869 36.667 0 49.253 45.158 37.231 27.578 0 0 47 46 37 28 0 0 1 1 1 1 0 3566.4 17643 1201 16971 40838 47316 47316 1 SKNYEFMWNPHLGYILTCPSNLGTGLR Unmodified 3167.5321 0.53209533 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 11 0 1 78.403 78.403 4 9.5907E-08 23830 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.803 46.018 0 0 0 0 36.688 58.649 0 0 0 0 37 56 0 0 0 0 1 1 16929 17644 1883 16972 40839 47317 47317 1 SKPGAAMVEMADGYAVDR Unmodified 1866.8604 0.86041834 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 1 6 0 1 61.519 61.519 3 0.0046777 20852 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.729 28.606 0 0 69.188 25.635 44.932 58.414 0 0 65 28 46 56 0 0 1 1 1 1 4030.7 17645 1110 16973 40840 47318 47318 1 SKPIPIMPASPQK Unmodified 1392.7799 0.77990682 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 10.3 0.471 2 1 55.009 55.009 3;4 0.00037711 13849 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.966 52.433 275.22 136.95 336.2 131.29 309.64 280.33 259 139 325 130 305 269 3 1 3 2 2 2 31766 17646 815;2590 16974 40841;40842;40843 47319;47320;47321 47319 3 SKPLAASPK Unmodified 897.52837 0.5283668 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 10.8 1.48 1 1 1 1 39.386 39.386 3 0.000629 8602 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.11 74.616 516.81 275.58 687.87 629.28 946.25 570.41 485 259 663 625 951 549 2 1 3 3 3 2 64237 17647 1382 16975 40844;40845;40846;40847 47322;47323;47324;47325 47322 4 SKPLTLLEYNLTMDTAK Unmodified 1937.018 0.017964835 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 1 9 0 1 78.727 78.727 4 3.8733E-05 26770 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.125 54.036 0 0 0 0 101.37 154.88 0 0 0 0 102 148 0 0 0 0 1 1 3859.9 17648 2790 16976 40848 47326 47326 1 SKQEALK Unmodified 802.45487 0.45486751 495 A2AMW0;E9Q5G1;F8VQB6 Capzb;Myo10 Unconventional myosin-X yes no 0 0 0 1 7 0 1 36.977 36.977 3 0.034385 8517 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.043 0 274.4 209.57 232.09 233.19 232.2 388.86 258 218 237 230 245 371 1 1 1 1 1 1 12556 17649 495 16977 40849 47327 47327 1 SKSDPIMLLK Unmodified 1130.6369 0.63693097 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 9 0 1 62.951 62.951 3 0.0011463 19312 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.441 23.094 358.11 0 406.11 0 0 0 336 0 377 0 0 0 1 0 1 0 0 0 30226 17650 1520 16978 40850 47328 47328 1 SKVDEAVAVLQAHQAK Unmodified 1692.9159 0.91588303 1484 P29341;F6ZAX1 Pabpc1 Polyadenylate-binding protein 1 yes no 0 0 0 1 8.5 0.5 1 1 60.048 60.048 5 0.00067816 17820 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.755 37.659 49.358 88.312 0 69.649 110.89 58.649 46 83 0 65 111 56 1 1 0 1 2 1 6858.2 17651 1484 16979 40851;40852 47329;47330 47330 2 SKVFGLHSVSR Unmodified 1215.6724 0.67240528 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 1 11.5 0.5 1 1 41.878 41.878 4 0.001954 7246 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.76 45.029 0 210.36 591.62 231.95 262.91 318.69 0 207 568 249 272 306 0 1 1 1 1 1 24875 17652 1850;2212 16980 40853;40854 47331;47332 47332 2 SKYPQHALALR Unmodified 1282.7146 0.71460444 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 1 10.5 0.5 1 1 40.081 40.081 4 0.00089078 7825 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.739 50.08 0 111.45 306.66 131.06 276.35 336.43 0 107 295 130 281 323 0 1 2 1 2 2 19209 17653 573 16981 40855;40856 47333;47334 47333 2 SLAAATGK Unmodified 717.4021 0.40210366 1664 P60041 Sst Somatostatin;Antrin;Somatostatin-28;Somatostatin-14 yes yes 0 0 0 0 8.5 0.5 1 1 43.282 43.282 2 0.0030877 10125 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.98 56.068 261.28 413.67 550.75 408.81 984.33 0 246 414 550 421 959 0 1 2 2 2 2 0 48126 17654 1664 16982 40857;40858 47335;47336 47336 2 SLAADDEGGPDLEPDYSTATR Unmodified 2178.9553 0.95530082 1862 P98203 Arvcf Armadillo repeat protein deleted in velo-cardio-facial syndrome homolog yes yes 0 0 0 0 2 0 1 59.146 59.146 3 2.6348E-07 20368 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.454 54.339 0 0 0 9.837 0 39.442 0 0 0 9 0 37 0 0 0 1 0 1 2493 17655 1862 16983 40859 47337 47337 1 SLAAEEEAAR Unmodified 1045.504 0.50400254 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 6 4.97 1 1 1 39.051 39.051 2 1.9608E-07 11743 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.75 78.754 0 0 45.896 161.01 51.921 77.402 0 0 46 157 56 74 0 0 1 2 1 1 14811 17656 3266 16984 40860;40861;40862 47338;47339;47340 47339 3 SLADEAEVHLK Unmodified 1210.6194 0.61936665 587 B1ATI9;Q3U432;Q60780 Gas7 Growth arrest-specific protein 7 yes no 0 0 0 0 7.33 4.03 1 1 1 54.322 54.322 3 0.00061407 17956 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.781 32.498 0 58.974 36.496 46 37.714 28.772 0 56 37 46 37 28 0 1 1 1 1 1 10646 17657 587 16985 40863;40864;40865 47341;47342;47343 47342 3 SLADELALVDVLEDK Unmodified 1628.8509 0.85088273 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 8.14 3.27 1 2 1 1 2 96.001 96.001 2;3 3.5915E-25 38463 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.24 112.47 205.62 157.97 126.07 162.68 269.18 243.8 192 156 125 155 268 234 7 6 3 5 8 8 129060 17658 1389 16986 40866;40867;40868;40869;40870;40871;40872 47344;47345;47346;47347;47348;47349;47350;47351;47352;47353;47354 47354 11 SLADELALVDVLEDKLK Unmodified 1870.0299 0.02990973 1389 P16125;D3Z7F0 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 1 7 0 2 97.891 97.891 3;4 1.8759E-05 35920 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.8 72.064 80.292 14.285 18.724 19.651 77.404 19.188 75 15 19 19 74 18 2 1 1 1 1 1 22834 17659 1389 16987 40873;40874 47355;47356 47355 2 SLADIAR Unmodified 744.413 0.41300269 1253 O70435;E0CX62 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 0 6 0 1 48.288 48.288 2 0.039057 14484 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.451 19.093 108.3 99.403 109.02 102.7 121.85 0 102 102 111 102 121 0 1 1 1 1 1 0 14345 17660 1253 16988 40875 47357 47357 1 SLADILDPSVK Unmodified 1156.634 0.63395408 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 7 0 1 77.304 77.304 3 0.0022667 27374 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.84 34.623 20.292 18.848 0 20.767 0 29.848 19 19 0 19 0 28 1 1 0 1 0 1 2128.2 17661 490 16989 40876 47358 47358 1 SLADLTAVDVPTR Unmodified 1356.7249 0.72489436 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 9 2.94 1 1 1 68.172 68.172 2;3 7.6427E-07 23886 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.26 69.096 173.49 88.046 138.12 142.69 53.483 176.5 166 93 139 139 56 167 3 2 2 2 1 2 32467 17662 3152 16990 40877;40878;40879 47359;47360;47361 47359 3 SLAEDFAEQPIKDAVITVPAFFNQAER Unmodified 3005.5135 0.5134516 3234 Q9JKR6;F6TRP3 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 1 7 0 1 92.734 92.734 4 0.052737 34397 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 27.143 20.638 0 20.216 0 9.6683 8.9699 0 0 19 0 9 9 0 0 1 0 1 1 0 2303 17663 3234 16991 40880 47362 47362 1 SLAEIVK Unmodified 758.4538 0.45380487 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 8 0 1 59.084 59.084 2 0.033166 18214 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.753 12.84 432.61 421.74 331.9 457.86 0 471.17 407 429 351 437 0 442 1 1 1 1 0 1 41752 17664 3376 16992 40881 47363 47363 1 SLAENYFDSTGR Unmodified 1358.6103 0.61025853 1292 O89112;B2KGR2 Lancl1 LanC-like protein 1 yes no 0 0 0 0 8 3.56 1 1 1 58.224 58.224 2 1.9518E-08 19997 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.14 80.604 59.617 37.355 47.508 77.202 128.27 183.96 56 37 46 74 129 176 2 1 1 2 2 3 19901 17665 1292 16993 40882;40883;40884 47364;47365;47366 47364 3 SLAGSSGPGASSGPGGDHSELIVR Unmodified 2194.0614 0.061437643 203 A0A0R4J1E2;E9QN08;Q80T06;P57776;D3YUQ9 Eef1d Elongation factor 1-delta yes no 0 0 0 0 5 0 1 48.821 48.821 3 3.3543E-17 15436 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.23 87.579 0 0 0 30.079 27.906 0 0 0 0 28 28 0 0 0 0 1 1 0 3126.4 17666 203 16994 40885 47367 47367 1 SLAILESMVLNSQSLYQK Unmodified 2023.066 0.06597766 2406 Q8BHL5;F6XD63 Elmo2 Engulfment and cell motility protein 2 yes no 0 0 0 0 10.5 0.5 1 1 97.77 97.77 3;4 0.00010669 31971 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.565 41.01 9.657 19.892 19.365 0 14.644 29.848 9 19 19 0 14 28 1 1 1 0 1 1 4287.4 17667 2406 16995 40886;40887 47368;47369 47368 2 SLALAGIHTPFLPAVK Unmodified 1633.9556 0.955563 892 S4R1K2;S4R2U8;E9Q350;S4R1E7;Q80TT2 Baiap3 BAI1-associated protein 3 yes no 0 0 0 0 11.5 0.5 1 1 75.795 75.795 3;4 0.0015749 20101 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.482 36.281 0 0 96.711 36.346 0 0 0 0 93 37 0 0 0 0 2 1 0 0 6682.9 17668 892 16996 40888;40889 47370;47371 47371 2 SLAPAAISSK Unmodified 943.53385 0.53384611 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 8 0 1 52.051 52.051 2 0.00074545 14827 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 44.566 69.235 0 85.643 85.615 0 118.33 65 0 83 83 0 111 1 0 1 1 0 1 7147.6 17669 1275 16997 40890 47372 47372 1 SLAQADAEK Unmodified 931.46108 0.4610751 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 42.333 42.333 2 0.0023908 12249 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.83 35.284 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17670 3266 16998 40891 47373 47373 1 SLASLALR Unmodified 829.50215 0.50215205 2425 Q8BL86 Mblac2 Metallo-beta-lactamase domain-containing protein 2 yes yes 0 0 0 0 9 0 1 58.965 58.965 2 0.017966 17387 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.451 28.553 0 59.584 0 0 66.005 57.813 0 56 0 0 65 56 0 1 0 0 1 1 2645.8 17671 2425 16999 40892 47374 47374 1 SLASLGLSLVASGGTAK Unmodified 1530.8617 0.86172219 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 1 0 1 83.722 83.722 2 0.00026725 29425 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.153 30.042 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 706.66 17672 2977 17000 40893 47375 47375 1 SLASYGLK Unmodified 837.45962 0.45961853 448 A2ADY9 Ddi2 Protein DDI1 homolog 2 yes yes 0 0 0 0 10 0 1 57.667 57.667 2 0.031071 14848 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.692 27.557 59.473 54.621 57.015 0 0 69.29 56 56 56 0 0 65 1 1 1 0 0 1 12026 17673 448 17001 40894 47376 47376 1 SLAVCEESSAR Unmodified 1207.5503 0.55030081 801 E0CY19;E0CYS3;E0CXW0;E0CYU3;E0CZ08;E9Q4A0;Q9DCB4 Arpp21 cAMP-regulated phosphoprotein 21 yes no 0 0 0 0 5 0 1 40.618 40.618 2 0.007316 11450 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.65 30.576 40.638 27.052 0 0 38.044 19.168 38 28 0 0 37 19 1 1 0 0 1 1 1916.3 17674 801 17002 40895 47377 47377 1 SLAYWVVK Unmodified 964.5382 0.53820321 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11.5 0.5 1 1 72.435 72.435 2 0.0027408 21101 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.67 77.873 89.059 176.63 63.384 77.104 268.98 56.438 83 167 65 74 259 56 1 2 1 1 2 1 61356 17675 570 17003 40896;40897 47378;47379;47380 47378 3 SLCDELR Unmodified 891.41202 0.41201641 2483 Q8C052;A0A1D5RLY6;A0A1D5RMG7 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 4 0 1 46.74 46.74 2 0.059095 14699 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.342 33.209 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17676 2483 17004 40898 47381 47381 1 SLCLVPVTLLLSNCSK Unmodified 1802.9634 0.96342684 358 E9PWG2;A0A286YCX6 Trappc8 yes no 0 0 0 0 1 0 1 92.12 92.12 3 0.00072134 32627 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.522 36.123 0 0 9.738 0 0 14.924 0 0 9 0 0 14 0 0 1 0 0 1 1502.5 17677 358 17005 40899 47382 47382 1 SLCPVSWVSAWDDR Unmodified 1676.7617 0.76169057 1639 P56391;A0A140LIU3 Cox6b1 Cytochrome c oxidase subunit 6B1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 82.824 82.824 2;3 1.4987E-40 32094 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 181.49 136.13 108.4 197 272.34 200.81 325.41 154.12 102 196 269 196 324 149 3 6 6 5 7 4 138480 17678 1639 17006 40900;40901;40902;40903 47383;47384;47385;47386;47387;47388;47389;47390 47389 8 SLDAAGK Unmodified 660.34425 0.34425443 1001 Q60710;F6TVP2 Samhd1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 yes no 0 0 0 0 6 0 1 32.239 32.239 2 0.029183 6977 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.935 86.935 398.2 713.32 276.76 578.08 640.31 471.02 376 700 321 555 653 459 1 1 1 1 1 1 53162 17679 1001 17007 40904 47391 47391 1 SLDAIPDNHK Unmodified 1108.5513 0.55128709 1565 P47757 Capzb F-actin-capping protein subunit beta yes yes 0 0 0 0 5 0 1 45.139 45.139 3 0.017353 13595 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.284 20.542 0 48.944 0 48.864 75.159 0 0 46 0 46 74 0 0 1 0 1 1 0 2564.6 17680 1565 17008 40905 47392 47392 1 SLDDFQAWLGR Unmodified 1306.6306 0.63060004 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.75 1.92 1 2 1 81.864 81.864 2;3 1.6169E-07 31778 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.93 61.08 256.72 258.04 95.92 30.604 276.71 105.25 241 259 93 28 268 102 4 3 1 1 3 1 51666 17681 2186 17009 40906;40907;40908;40909 47393;47394;47395;47396 47396 4 SLDFLIELLHK Unmodified 1326.7547 0.75473792 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 10.5 0.5 1 1 93.556 93.556 3 0.00012411 30106 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.866 56.922 0 58.995 35.203 28.98 29.288 0 0 56 37 28 28 0 0 2 2 1 1 0 8668.4 17682 895 17010 40910;40911 47397;47398 47398 2 SLDFYTR Unmodified 900.43413 0.43413207 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 8 0 1 55.255 55.255 2 0.021996 16368 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.75 49.242 148.66 105.18 173.63 0 169.43 152.93 140 111 167 0 167 148 1 1 1 0 1 1 19255 17683 2897 17011 40912 47399 47399 1 SLDGEVGTGQYATTK Unmodified 1525.726 0.72601657 369 A0A286YDY4 yes yes 0 0 0 0 6 0 1 52.427 52.427 3 0.00048304 16489 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.377 49.822 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17684 369 17012 40913 47400 47400 1 SLDIQCEQLSDAR Acetyl (Protein N-term) 1575.7199 0.71988533 2741 Q91VI7;A0A1B0GRG4;A0A1B0GRY7 Rnh1 Ribonuclease inhibitor yes no 1 0 0 0 2 0.816 1 1 1 62.867 62.867 2 1.0782E-10 20949 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.616 73.644 20.335 0 39.03 20.246 0 20.254 19 0 37 19 0 19 1 0 2 1 0 1 14257 17685 2741 17013 40914;40915;40916 47401;47402;47403 47401 3 SLDKDPLLLSGTHVMEGSGR Unmodified 2111.0681 0.068102925 1096 G5E829;A0A1W2P7C7 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 1 7 0 1 61.617 61.617 4 2.8477E-05 20000 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.779 37.837 78.094 101.02 134.21 0 86.818 0 74 102 130 0 83 0 1 1 1 0 1 0 11125 17686 1096 17014 40917 47404 47404 1 SLDLDDWPR Unmodified 1115.5247 0.52473799 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 5 0 1 68.49 68.49 2 0.0030998 24656 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.062 45.904 0 38.231 68.036 0 37.054 47.979 0 37 65 0 37 46 0 1 1 0 1 1 4131 17687 1980 17015 40918 47405 47405 1 SLDLDSIIAEVK Unmodified 1301.7078 0.70784731 657 CON__P04264;A0A2R8VHP3 no no 0 0 0 0 8.17 2.27 1 2 2 1 89.19 89.19 2;3 1.6403E-08 32951 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.29 15.442 148.65 104.77 116.49 88.597 136.36 244.26 139 102 112 84 140 232 3 3 4 2 4 5 51387 + 17688 657 17016 40919;40920;40921;40922;40923;40924 47406;47407;47408;47409;47410;47411;47412 47409 7 SLDLFNCEVTNLNAYR Unmodified 1927.9098 0.90981137 720 D3YYE1;D3Z7M9;O35381;F6UFG6 Anp32a Acidic leucine-rich nuclear phosphoprotein 32 family member A yes no 0 0 0 0 7.5 0.5 1 1 79.735 79.735 3 4.2044E-05 28496 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.1 71.406 29.542 114.13 118.73 92.322 119.68 77.092 28 111 120 93 121 74 1 2 2 2 2 1 24467 17689 720 17017 40925;40926 47413;47414 47413 2 SLDLVTMK Unmodified 905.4892 0.4892041 112;3317;575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46;A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YVA6;Q9R1T4 Sept8;Sept11;Sept6 Septin-8;Septin-11;Septin-6 no no 0 0 0 0 10.5 2.5 1 1 65.73 65.73 2;3 0.0089371 21364 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.54 61.439 246.78 157.21 229.53 0 244.49 221.15 232 167 222 0 241 214 2 2 2 0 2 2 31981 17690 575;112;3317 17018 40927;40928 47415;47416 47415 2 SLDNFFAK Unmodified 940.46543 0.46543219 6 A0A087WNP6;Q4VAA2 Cdv3 Protein CDV3 yes no 0 0 0 0 11.5 1.5 1 1 69.834 69.834 2 0.03255 20547 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.816 27.57 109.45 0 0 69.705 177.93 86.445 102 0 0 65 176 83 2 0 0 1 2 1 10931 17691 6 17019 40929;40930 47417;47418 47417 2 SLDPFKPFIIFSNR Unmodified 1679.9035 0.90352742 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 1 11.5 0.5 1 1 84.828 84.828 3 0.0020826 23653 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.244 41.879 49.128 45.631 0 83 38.702 0 46 46 0 83 37 0 1 1 0 1 1 0 20720 17692 175 17020 40931;40932 47419;47420 47420 2 SLDSLDPAGLLTSPK Unmodified 1512.8035 0.80353861 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4;E9QAR5 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 7.5 0.5 1 1 80.358 80.358 3 5.3006E-05 28146 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.566 59.037 69.318 84.702 0 40.441 0 0 65 84 0 37 0 0 2 2 0 1 0 0 10734 17693 784 17021 40933;40934 47421;47422 47422 2 SLDTNEVTQEITDETR Unmodified 1849.8541 0.85413021 2113 Q61161 Map4k2 Mitogen-activated protein kinase kinase kinase kinase 2 yes yes 0 0 0 0 2 0 1 65.396 65.396 3 0.00021381 23404 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.105 41.543 20.335 0 8.7335 39.246 0 0 19 0 9 38 0 0 1 0 1 2 0 0 1808.4 17694 2113 17022 40935 47423;47424 47424 2 SLDVFNIILVR Unmodified 1287.7551 0.75507227 2475 Q8BX70;A0A1L1SUY8 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 0 11 0 1 91.665 91.665 2 0.028423 29400 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.327 23.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2920.6 17695 2475 17023 40936 47425 47425 1 SLDWNAEYEVYVVAENQQGK Deamidation (N) 2342.0703 0.070270995 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 1 0 0 13 0 1 81.134 81.134 3 0.00010791 31414 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.707 39.584 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17696 71;74;949;1367 17024 40937 47426 47426 27 1 SLEAEALAEDIEK Unmodified 1416.6984 0.69840484 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 3 0 1 71.314 71.314 3 0.00084233 26395 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.181 23.962 0 20.216 0 30.466 7.3261 20.045 0 19 0 28 9 19 0 1 0 1 1 1 6423.4 17697 965 17025 40938 47427 47427 1 SLEAEILQLQEELASSER Unmodified 2044.0324 0.032428926 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 7 3.54 1 1 1 1 94.454 94.454 3 4.0017E-15 35744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.419 74.705 9.6187 28 15.444 0 0 0 9 28 15 0 0 0 1 1 2 0 0 0 12064 17698 1974 17026 40939;40940;40941;40942 47428;47429;47430;47431 47430 4 SLEAQAEK Unmodified 874.43961 0.43961137 782;926;905;1106;1107;1656;209 E9Q452;E9Q454;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771;P21107;A0A0R4J1P2;D3Z6I8;E9Q7Q3 Tpm1;Tpm3 Tropomyosin alpha-1 chain;Tropomyosin alpha-3 chain no no 0 0 0 0 7 3.54 1 1 1 1 40.904 40.904 2 0.00056225 11147 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.44 4.2562 322.88 628.67 934.37 754.83 955.49 1047.3 305 626 931 758 981 1008 2 4 4 4 4 4 132620 17699 905;1106;1107;1656;209;782;926 17027 40943;40944;40945;40946 47432;47433;47434;47435 47434 4 SLEDALNR Unmodified 916.46141 0.46140945 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4 0 1 50.1 50.1 2 0.011684 16342 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.439 21.52 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 3858 17700 2517 17028 40947 47436 47436 1 SLEDALSSDTSGHFR Unmodified 1620.738 0.73797824 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 4 0 1 56.546 56.546 3 0.018086 19358 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.587 20.263 39.588 0 19.046 29.469 0 0 37 0 19 28 0 0 1 0 1 1 0 0 3406.3 17701 1050;1380 17029 40948 47437 47437 1 SLEDQVETLR Unmodified 1188.5986 0.59863121 1166 O08795 Prkcsh Glucosidase 2 subunit beta yes yes 0 0 0 0 3.5 0.5 1 1 55.312 55.312 2 0.0035651 18779 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.017 44.57 108.59 45.361 105.88 27.239 0 158.83 102 46 102 28 0 149 2 1 2 1 0 2 12087 17702 1166 17030 40949;40950 47438;47439 47439 2 SLEDVVR Unmodified 816.43413 0.43413207 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 5 0 1 49.75 49.75 2 0.036462 15847 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.119 50.699 78.886 23.354 66.907 36.453 0 39.442 74 28 65 37 0 37 1 1 1 1 0 1 4435.6 17703 1438 17031 40951 47440 47440 1 SLEEIYLFSLPIK Unmodified 1550.8596 0.85959692 1449 P25444;D3YVC1;D3YWJ3;D3Z536 Rps2;Gm8225 40S ribosomal protein S2 yes no 0 0 0 0 9 0.816 1 1 1 95.133 95.133 3 0.0010703 34113 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.038 37.433 109.07 12.497 53.234 47.04 76.114 73.015 102 14 51 47 76 70 3 1 2 2 3 2 18163 17704 1449 17032 40952;40953;40954 47441;47442;47443;47444 47443 4 SLEGEAAALR Unmodified 1015.5298 0.52982336 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 4 0 2 49.766 49.766 2;3 0.00018962 16104 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.965 32.719 80.38 18.848 0 49.219 56.315 0 75 19 0 46 56 0 2 1 0 1 1 0 30397 17705 1415 17033 40955;40956 47445;47446 47445 2 SLEIEEK Unmodified 846.43346 0.43346336 2211 Q6P1F6;Q9CWU3;Q6ZWR4;Q925E7;G3UXS9 Ppp2r2a;Ppp2r2b;Ppp2r2d Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform no no 0 0 0 0 4 0 1 51.802 51.802 3 0.0076487 16966 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.469 9.4701 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 2461.5 17706 2211 17034 40957 47447 47447 1 SLELAIGR Unmodified 857.49707 0.49706667 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 7 0 1 58.393 58.393 2 0.022008 18467 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.058 16.27 48.92 45.054 35.399 37.838 26.221 38.694 46 46 37 37 28 37 1 1 1 1 1 1 3082.8 17707 2282 17035 40958 47448 47448 1 SLELNGAGEPVEGAPR Deamidation (N) 1595.7791 0.77911477 1655 P58404;V9GXI9 Strn4 Striatin-4 yes no 0 1 0 0 2 0 1 57.021 57.021 3 0.000257 19334 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.265 31.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17708 1655 17036 40959 47449 47449 635 1 SLENVLEINKR Unmodified 1313.7303 0.73031409 407 A0A338P6E5;A0A338P6I6;Q62108 Dlg4 Disks large homolog 4 yes no 0 0 0 1 8 0 1 60.314 60.314 3 0.053365 18832 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.991 22.36 0 69.16 0 0 0 99.138 0 65 0 0 0 93 0 1 0 0 0 1 20735 17709 407 17037 40960 47450 47450 1 SLEPLPSSGTDFGALGEEAEFVEVEPEAK Unmodified 3033.4343 0.43425781 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 4 0 1 87.8 87.8 4 0.0011258 33308 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.202 24.005 0 9.1836 23.472 19.368 0 0 0 9 23 19 0 0 0 1 1 1 0 0 3250.2 17710 2379 17038 40961 47451 47451 1 SLEQSEAAVAQVLEER Unmodified 1757.8796 0.8795571 465 A2AHG0 Lzts3 Leucine zipper putative tumor suppressor 3 yes yes 0 0 0 0 4 0 1 78.282 78.282 3 0.00059872 29256 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.964 33.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17711 465 17039 40962 47452 47452 1 SLESLDTSLFAK Unmodified 1309.6765 0.67654718 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 0 0 0 0 9.33 2.62 1 1 1 77.502 77.502 3 0.00012385 27528 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.081 56.963 69.634 0 18.704 79.27 54.454 78.129 65 0 19 74 56 74 2 0 1 2 2 2 6694 17712 3066 17040 40963;40964;40965 47453;47454;47455 47453 3 SLESLHGFVAAATK Unmodified 1429.7565 0.75652884 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 9 0 1 64.768 64.768 3 0.00047939 20219 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.285 41.493 88.542 102.56 0 71.045 0 0 83 102 0 65 0 0 1 1 0 1 0 0 6437.1 17713 3266 17041 40966 47456 47456 1 SLETEHK Unmodified 842.4134 0.41339662 2775 Q91YQ5 Rpn1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 yes yes 0 0 0 0 5 0 1 32.383 32.383 3 0.042024 7541 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.787 15.602 0 58.52 0 49.249 54.683 47.476 0 55 0 46 56 46 0 1 0 1 1 1 1503.1 17714 2775 17042 40967 47457 47457 1 SLETENAGLR Unmodified 1088.5462 0.54620171 1580 P48678;D3YUF7 Lmna Prelamin-A/C;Lamin-A/C yes no 0 0 0 0 4 0 1 42.657 42.657 2 3.2758E-05 12776 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.815 41.382 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17715 1580 17043 40968 47458 47458 1 SLETNTHVK Unmodified 1027.5298 0.52982336 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 0 7 0 1 36.612 36.612 3 0.0002986 8289 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.11 52.309 118.5 119.69 0 118.95 126.25 124.32 111 120 0 111 130 120 1 1 0 1 1 1 6532.4 17716 3232 17044 40969 47459 47459 1 SLETSLVPLSDPK Unmodified 1384.745 0.7449611 3300 Q9R0N0 Galk1 Galactokinase yes yes 0 0 0 0 6 0 1 70.086 70.086 3 0.064086 24797 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 32.61 11.947 0 58.831 45.053 26.687 65.474 37.574 0 56 46 28 65 37 0 1 1 1 1 1 3381.1 17717 3300 17045 40970 47460 47460 1 SLETVYLER Unmodified 1108.5764 0.57643921 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 5.5 0.5 1 1 57.732 57.732 2 0.00090847 19028 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.46 68.857 117.89 109.35 111.9 214.11 116.55 184.29 111 112 111 204 120 176 2 2 1 2 1 2 23984 17718 1995 17046 40971;40972 47461;47462 47462 2 SLEVSER Unmodified 818.4134 0.41339662 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 4 0 1 37.588 37.588 2 0.008866 10368 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.5 36.381 99.789 0 0 142.09 0 108.73 93 0 0 130 0 102 1 0 0 1 0 1 19072 17719 1495 17047 40973 47463 47463 1 SLFAMPETGIGLFPDVGGGYFLPR Unmodified 2540.2774 0.27736742 2621 Q8QZS1;E0CX19 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 104.17 104.17 3 5.3473E-08 33425 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.61 37.888 0 2.987 12.26 12.219 8.8527 0 0 3 12 12 9 0 0 1 1 1 1 0 1041.4 17720 2621 17048 40974;40975 47464;47465 47465 2 SLFFPDEAINK Unmodified 1279.6449 0.64485312 1855 P97494 Gclc Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 0 8 0 1 74.688 74.688 3 0.002418 25503 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.542 35.555 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 5682.8 17721 1855 17049 40976 47466 47466 1 SLFGSIGEIESCK Unmodified 1425.681 0.68098063 436 Q61701;A2A9S2;A2A9S0;Q8BVA9;A2A9R6;A2A9R8;A2A9S3;B1AXZ0;Q80UJ0;Q3UR02;B1AXZ5;Q80Y51;B1AXZ6;Q60899;B1AXZ4;A2A9R4;A2A9R5;H3BLG7;A2A9S1 Elavl4;Elavl2 ELAV-like protein 4;ELAV-like protein;ELAV-like protein 2 yes no 0 0 0 0 7.5 0.5 1 1 74.913 74.913 3 1.7949E-07 25627 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.31 86.93 39.464 48.323 76.97 0 56.948 86.853 37 46 74 0 56 83 1 1 2 0 1 2 8246 17722 436 17050 40977;40978 47467;47468 47468 2 SLFIFGEDNIVR Unmodified 1408.7351 0.73506511 33 A0A087WS83;Q61290 Cacna1e Voltage-dependent R-type calcium channel subunit alpha-1E yes no 0 0 0 0 8 0 1 81.148 81.148 2 0.0010966 28594 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.721 39.157 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17723 33 17051 40979 47469 47469 1 SLFLGQK Unmodified 791.45414 0.45413923 3296 Q9QZQ8 H2afy Core histone macro-H2A.1 yes yes 0 0 0 0 11 0 1 60.076 60.076 2 0.021687 15656 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.12 55.077 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29449 17724 3296 17052 40980 47470 47470 1 SLFQDLELK Unmodified 1091.5863 0.58627561 1104 G5E8H1 Gria2 no no 0 0 0 0 9 0 1 78.635 78.635 2 0.012539 26753 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.2 52.929 69.247 43.492 46.813 0 0 0 65 46 46 0 0 0 1 1 1 0 0 0 2473.8 17725 1104 17053 40981 47471 47471 1 SLFQEGSR Unmodified 922.45084 0.45084476 1201 O35633 Slc32a1 Vesicular inhibitory amino acid transporter yes yes 0 0 0 0 6 0 1 46.12 46.12 2 0.038721 13553 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.224 32.928 0 48.944 0 59.664 82.108 57.353 0 46 0 56 83 56 0 1 0 1 1 1 7085.7 17726 1201 17054 40982 47472 47472 1 SLFSDQGR Unmodified 908.43519 0.4351947 2738 Q91VF2 Hnmt Histamine N-methyltransferase yes yes 0 0 0 0 7 0 1 46.952 46.952 2 0.021569 13094 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.318 53.163 0 0 0 30.604 0 49.036 0 0 0 28 0 46 0 0 0 1 0 1 4471.8 17727 2738 17055 40983 47473 47473 1 SLFSNIVTK Unmodified 1007.5651 0.56514624 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 11.5 0.5 1 1 69.052 69.052 2 0.00058846 19571 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.83 52.406 44.834 45.921 0 84.59 159.4 57.813 42 46 0 79 158 56 1 1 0 1 2 1 36941 17728 2977 17056 40984;40985 47474;47475 47474 2 SLFSSIGEVESAK Unmodified 1352.6824 0.68236084 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 7 0 1 72.603 72.603 3 1.0892E-11 25137 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.42 86.778 98.953 80.431 72.294 54.977 102.22 56.779 93 83 74 56 102 56 1 1 1 1 1 1 6267.5 17729 1812 17057 40986 47476 47476 1 SLFTEPSEPLPEEPK Unmodified 1698.8352 0.83523267 1851 P97441 Slc30a3 Zinc transporter 3 yes yes 0 0 0 0 4 0 1 69.06 69.06 3 0.00022617 24908 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.246 44.373 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17730 1851 17058 40987 47477 47477 1 SLFVQELLLSTLVR Unmodified 1616.9501 0.95014327 127 A0A0N4SV15;Q80UY2 Kcmf1 E3 ubiquitin-protein ligase KCMF1 yes no 0 0 0 0 12 0 1 102.84 102.84 3 9.2846E-05 28902 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.344 49.258 0 0 14.756 8.7976 8.5057 14.681 0 0 14 9 9 14 0 0 1 1 1 1 1201.2 17731 127 17059 40988 47478 47478 1 SLGAEPLEVDLK Unmodified 1269.6816 0.68163256 2142 Q61941;E9Q8F4;Q8C9V5;Q8BGK0 Nnt NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 0 5 0 1 70.014 70.014 3 0.040034 25407 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.366 14.761 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 1955.9 17732 2142 17060 40989 47479 47479 1 SLGASSYYGLFTTAR Unmodified 1592.7835 0.78347187 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 71.885 71.885 2 4.1315E-16 20923 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 125.46 89.124 0 19.744 28.261 19.083 28.291 58.889 0 19 28 19 28 56 0 1 1 1 1 2 9645.5 17733 1226 17061 40990;40991 47480;47481 47481 2 SLGDDISSETSGDFR Unmodified 1584.6904 0.69035934 1202 O35639;Q3TET3;A0A0G2JDV9 Anxa3 Annexin A3;Annexin yes no 0 0 0 0 2.5 0.5 1 1 58.932 58.932 3 0.033593 20289 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 37.092 24.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17734 1202 17062 40992;40993 47482;47483 47482 2 SLGDSSLATDLPSAKDDFEEDNNE Unmodified 2568.0987 0.098730169 3451 S4R2R5 Ank2 yes yes 0 0 0 1 4 0 1 73.04 73.04 3 0.00055367 26758 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.244 34.08 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2373 17735 3451 17063 40994 47484 47484 1 SLGEESWHFK Unmodified 1218.5669 0.56693715 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 6 0.816 1 1 1 57.625 57.625 3 1.109E-05 18954 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.38 86 265.43 230.68 311.02 310.24 244.06 280.86 250 232 310 305 246 270 3 3 3 4 2 4 60320 17736 71;74;949;1367 17064 40995;40996;40997 47485;47486;47487;47488 47486 4 SLGEIAALTSK Unmodified 1088.6077 0.60773933 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 8.33 0.471 2 1 70.377 70.377 2;3 0.0014308 22768 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.499 33.79 138.63 92.754 66.168 44.795 107.19 47.35 130 97 65 42 106 46 2 2 1 1 2 1 10223 17737 2182 17065 40998;40999;41000 47489;47490;47491 47491 3 SLGIAPLPLQR Unmodified 1163.7026 0.70264277 2483 Q8C052;A0A1D5RLY6 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 9.5 0.5 1 1 67.835 67.835 2 0.00567 21589 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.465 30.641 0 0 70.33 0 0 59.696 0 0 65 0 0 56 0 0 1 0 0 1 6388.9 17738 2483 17066 41001;41002 47492;47493 47492 2 SLGLYGK Unmodified 736.41194 0.41194006 1414 P19157;P46425 Gstp1;Gstp2 Glutathione S-transferase P 1;Glutathione S-transferase P 2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 54.994 54.994 2 0.017391 18535 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.61 43.577 3065.1 2566.8 2948.3 2198.9 2246.7 1982.6 2885 2653 2972 2170 2263 1920 5 5 5 4 4 4 542560 17739 1414 17067 41003;41004;41005;41006 47494;47495;47496;47497;47498 47498 5 SLGMAVEDLVAAK Unmodified 1302.6853 0.68533773 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 81.23 81.23 3 7.4048E-05 29229 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.623 57.303 128.68 100.35 153.9 113.55 158.44 175.41 121 97 148 112 158 167 3 3 3 3 4 3 72506 17740 1223 17068 41007;41008;41009;41010;41011 47499;47500;47501;47502;47503;47504 47500 6 SLGNVINPDTIISGGK Unmodified 1583.8519 0.85188578 2413 Q8BIJ6;E9PWN2 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 0 7 0 1 75.629 75.629 3 0.0017672 26457 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.463 26.93 0 14.078 48.927 0 0 39.442 0 14 46 0 0 37 0 1 1 0 0 1 2212.5 17741 2413 17069 41012 47505 47505 1 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR Unmodified 4068.8391 0.83909713 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 0 0 0 13 0 1 112.95 112.95 4 3.7652E-05 44636 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 34.803 30.445 7.4718 1.5359 5.2802 0 0 0 7 2 5 0 0 0 1 1 1 0 0 0 2977.5 17742 1340 17070 41013 47506 47506 1 SLGQPIK Unmodified 741.43849 0.43848916 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 10 2.16 1 1 1 46.973 46.973 2;3 0.021458 11766 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.39 44.429 318.58 180.75 315.73 381.51 475.43 172.31 299 176 313 371 474 167 2 2 2 2 2 1 48719 17743 1957 17071 41014;41015;41016 47507;47508;47509 47508 3 SLGQPSSSTAGGSQL Unmodified 1375.6579 0.657937 2310 Q80U23 Snph Syntaphilin yes yes 0 0 0 0 5.5 0.5 1 1 52.501 52.501 2 3.475E-22 17169 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 140.91 122.64 0 48.836 6.4746 41.148 0 0 0 46 9 38 0 0 0 2 1 2 0 0 5158.7 17744 2310 17072 41017;41018 47510;47511 47510 2 SLGSEEINPVHTDNFQER Unmodified 2070.9607 0.96066097 1181 O35188 Cx3cl1 Fractalkine;Processed fractalkine yes yes 0 0 0 0 4 0 1 52.439 52.439 3 0.0083484 17476 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.523 30.24 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1767 17745 1181 17073 41019 47512 47512 1 SLGTADVHFER Unmodified 1230.5993 0.59929991 1159 O08583;G3X9I4;Q9JJW6 Alyref;Alyref2 THO complex subunit 4;Aly/REF export factor 2 yes no 0 0 0 0 5 0 1 46.567 46.567 3 2.9605E-09 14329 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.43 86.272 0 0 0 0 65.675 67.416 0 0 0 0 65 65 0 0 0 0 1 1 6231.7 17746 1159 17074 41020 47513 47513 1 SLGTWGSLSAAK Unmodified 1176.6139 0.61388734 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 10.5 0.5 1 1 65.271 65.271 2 1.9355E-23 17830 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 169.99 112.82 88.661 0 137.27 66.054 53.214 97.62 83 0 130 65 56 93 1 0 2 1 1 2 15335 17747 1999 17075 41021;41022 47514;47515 47515 2 SLGVGFATR Unmodified 906.49232 0.49231565 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 0 0 0 10 1.87 1 1 1 1 53.274 53.274 2 0.0017863 15559 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.009 50.66 267.2 277.77 100.63 319.72 335.41 483.99 250 278 93 297 345 463 2 3 1 3 3 4 158420 17748 1352 17076 41023;41024;41025;41026 47516;47517;47518;47519 47516 4 SLGVHFSK Unmodified 873.47085 0.47085192 409 D4AFX6;A0A338P6P6;Q6ZQK5;Q8CI47;Q8K2H4 Acap2;Acap1 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2;Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 yes no 0 0 0 0 9 0 1 48.829 48.829 3 0.046805 12548 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.283 2.971 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17749 409 17077 41027 47520 47520 1 SLGYAYVNFQQPADAER Unmodified 1927.9064 0.90644055 1484;549 P29341;A0A2I3BR37;Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9;V9GXG3 Pabpc1;Pabpc4 Polyadenylate-binding protein 1;Polyadenylate-binding protein no no 0 0 0 0 8 0 1 65.97 65.97 3 5.1567E-06 21396 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.176 72.658 39.407 0 49.423 27.658 0 29.848 37 0 47 28 0 28 1 0 1 1 0 1 6600.6 17750 1484;549 17078 41028 47521 47521 1 SLGYDLPMVEEGEPDPEFEAILDTVDPNR Unmodified 3246.4915 0.49145511 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10 4.24 1 2 102.76 102.76 3;4 2.3472E-18 34834 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.425 65.992 9 29.792 0 20.767 0 9.594 9 28 0 19 0 9 1 1 0 1 0 1 7278.1 17751 551 17079 41029;41030;41031 47522;47523;47524 47522 3 SLHDALCVIR Unmodified 1182.6179 0.61792687 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 7.67 0.471 1 2 54.293 54.293 3 0.00057083 15643 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.862 0 108.47 93.606 218.02 141.07 201.95 144.21 102 93 213 139 204 139 2 2 3 2 3 2 30194 17752 1825 17080 41032;41033;41034 47525;47526;47527 47526 3 SLHDALCVLAQTVK Unmodified 1553.8236 0.82356254 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 11.3 0.471 2 1 79.79 79.79 3;4 1.5324E-07 24464 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.95 87.158 74 57.216 0 142.09 0 127.92 74 56 0 130 0 120 1 2 0 2 0 1 53573 17753 1823 17081 41035;41036;41037 47528;47529;47530;47531 47528 4 SLHDALCVLAQTVKDPR Unmodified 1922.0044 0.0043804565 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 1 11.5 0.5 1 1 75.305 75.305 4 0.0028489 22324 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.723 22.362 110.28 0 119.8 29.94 137.34 194.36 103 0 111 28 139 186 2 0 2 1 3 3 16256 17754 1823 17082 41038;41039 47532;47533;47534 47532 3 SLHQFLLEPITCHAWNR Acetyl (Protein N-term) 2163.0684 0.068377697 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 1 0 0 0 9 0 1 73.665 73.665 3 1.3278E-06 24332 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.493 28.328 79.128 54.248 0 0 67.99 0 74 56 0 0 65 0 1 1 0 0 1 0 9010.4 17755 3303 17083 41040 47535 47535 1 SLHSEEVPASDTAR Unmodified 1497.7059 0.70594983 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 3 0 1 34.578 34.578 3 2.0937E-07 9526 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.44 75.717 20.069 18.227 38.015 18.501 0 29.848 19 19 37 19 0 28 1 1 1 1 0 1 7116.2 17756 281 17084 41041 47536 47536 1 SLHTLFGDELCK Unmodified 1418.6864 0.68640036 656 CON__P02769 yes yes 0 0 0 0 8 0 1 65.044 65.044 3 0.017879 20923 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.941 20.895 78.004 100.77 149.64 91.054 89.119 115.78 74 102 148 93 93 111 1 1 1 1 1 1 10970 + 17757 656 17085 41042 47537 47537 1 SLHTLFGDK Unmodified 1016.5291 0.52909508 1321;655 P07724;CON__P02768-1 Alb Serum albumin no no 0 0 0 0 10.2 1.72 1 1 1 1 1 56.465 56.465 2;3 0.0016088 14398 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.662 49.494 534.35 518.28 557.16 591.23 737.82 624.88 501 511 565 584 743 603 5 4 5 6 5 6 215240 + 17758 1321;655 17086 41043;41044;41045;41046;41047 47538;47539;47540;47541;47542;47543;47544 47541 7 SLIAYVGDSTVLK Unmodified 1364.7551 0.75513185 1432 P21995 Emb Embigin yes yes 0 0 0 0 9 0 1 76.429 76.429 3 0.00046419 25633 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.275 36.403 0 0 28.57 38.738 0 69.29 0 0 28 37 0 65 0 0 1 1 0 1 3612.9 17759 1432 17087 41048 47545 47545 1 SLIEQCSAPLPPSIFMELANK Unmodified 2344.1807 0.18068984 2789 Q920E5;A0A0G2JEA5 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 11 2 1 1 93.055 93.055 3 0.0085365 33251 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.538 19.772 69.048 73.158 55.137 87.163 72.449 58.156 65 74 56 84 75 56 2 2 1 2 2 1 3856.3 17760 2789 17088 41049;41050 47546;47547;47548 47547 3 SLIHLSLANNNLQTLPK Unmodified 1875.0578 0.057796236 3210 Q9JIA1;A0A0G2JGB7;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 11 0.816 1 1 1 68.919 68.919 3;4 2.0471E-34 17424 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.44 100.08 0 47.686 75.228 44.414 73.386 57.602 0 46 74 46 74 56 0 1 1 1 1 1 19849 17761 3210 17089 41051;41052;41053 47549;47550;47551 47551 3 SLIIVHPSWFIR Unmodified 1466.8398 0.83980496 2403;1003 Q8BHE3;F6VF29;Q91VL0;G5E8U9;O54940 Atcay;Bnip2 Caytaxin;BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 no no 0 0 0 0 1 0 1 75.394 75.394 3 0.026307 25995 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 43.68 14.352 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17762 2403;1003 17090 41054 47552 47552 1 SLIPSYIR Unmodified 947.54402 0.54401687 1515;1697 P35279;D3YV69;P61294;A0A1L1SRS6 Rab6a;Rab6b Ras-related protein Rab-6A;Ras-related protein Rab-6B no no 0 0 0 0 9.5 0.5 1 1 62.335 62.335 2 0.022487 18948 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.774 25.439 418.74 172.93 349.07 386.62 421.11 378.64 393 176 340 380 432 364 3 2 2 3 3 2 72045 17763 1515;1697 17091 41055;41056 47553;47554;47555 47553 3 SLISALK Unmodified 730.45889 0.45889025 946 E9QAQ3;Q6ZQ82 Arhgap26 Rho GTPase-activating protein 26 yes no 0 0 0 0 11 0 1 63.047 63.047 2 0.023689 16948 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.72 23.122 0 0 156.39 132.77 0 0 0 0 150 130 0 0 0 0 1 1 0 0 13466 17764 946 17092 41057 47556 47556 1 SLITHVCDLMSGAR Unmodified 1558.7596 0.75958208 1519 P35436 Grin2a Glutamate receptor ionotropic, NMDA 2A yes yes 0 0 0 0 10 0 1 67.181 67.181 3 0.014305 19141 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.838 17.987 48.743 84.496 31.682 68.17 52.457 86.981 46 83 37 65 56 83 1 1 1 1 1 1 2859.8 17765 1519 17093 41058 47557 47557 1 SLIYTPDYDSFSLDTYSWPK Unmodified 2397.1053 0.10525952 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 7.67 0.471 1 2 91.413 91.413 3;4 4.6258E-07 33886 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.325 53.477 0 34.048 15.148 19 37.714 38.366 0 32 14 19 37 37 0 1 1 1 1 2 5874.7 17766 2432 17094 41059;41060;41061 47558;47559;47560 47558 3 SLKDFSSSK Unmodified 997.50803 0.50802529 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 9.5 0.5 1 1 49.42 49.42 3 0.018317 11515 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.255 36.001 1280.7 855.24 1339.3 1403.8 1315.3 1275.8 1205 906 1349 1380 1361 1232 2 2 2 2 2 2 122550 17767 1160 17095 41062;41063 47561;47562 47562 2 SLKPDFVLIR Unmodified 1186.7074 0.7073938 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 9.43 3.66 1 1 2 1 1 1 65.413 65.413 3 2.4574E-05 17949 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.27 77.064 3863.7 3153.2 3979.8 6014.2 3141.5 5163.2 3624 3178 4016 5764 3250 4918 7 7 5 9 6 8 1945400 17768 1282 17096 41064;41065;41066;41067;41068;41069;41070 47563;47564;47565;47566;47567;47568;47569;47570;47571;47572;47573 47570 11 SLLAAESAASLQGAELER Unmodified 1814.9374 0.93740633 1985 Q3UHK1 Slc2a13 Proton myo-inositol cotransporter yes yes 0 0 0 0 6 0 1 69.165 69.165 3 9.5258E-06 24373 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.334 41.757 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17769 1985 17097 41071 47574 47574 1 SLLDACEGR Unmodified 1019.4706 0.47059393 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6 0 1 48.394 48.394 2 0.00076865 14558 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.73 79.755 177.84 134.01 113.62 163.58 124.55 144.62 167 139 120 158 131 139 1 1 1 1 1 1 13624 17770 2148 17098 41072 47575 47575 1 SLLEGEGSSGGGGR Unmodified 1261.5899 0.58985744 659 CON__P13645 yes yes 0 0 0 0 4.5 0.5 1 1 42.948 42.948 2 0.00037316 12881 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.82 60.433 50.228 18.546 18.474 39.423 53.722 58.163 47 19 19 38 55 56 2 1 1 2 2 2 11058 + 17771 659 17099 41073;41074 47576;47577 47576 2 SLLGAFIPR Unmodified 972.57565 0.57565135 2150 Q8BKQ3;Q6DIC9;Q62288 Spock1 Testican-1 yes no 0 0 0 0 6.5 5.5 1 1 76.296 76.296 2 0.0044405 26389 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.794 55.565 49.121 0 78.121 38.156 37.714 28.772 46 0 74 37 37 28 1 0 2 1 1 1 13420 17772 2150 17100 41075;41076 47578;47579 47578 2 SLLGESAPALHLNK Unmodified 1448.7987 0.798728 9 A0A087WNV1;A0A087WSR7;A0A087WR52;Q8K2K6;A0A087WRL1 Agfg1 Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 0 8.5 0.5 1 1 62.423 62.423 3;4 0.00011216 19019 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.412 65.557 0 136.54 106.45 122.64 115.63 154.47 0 130 111 120 121 148 0 2 2 2 2 2 7351.1 17773 9 17101 41077;41078 47580;47581 47581 2 SLLGKDVLFLK Unmodified 1231.754 0.75400964 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 11 0 1 76.085 76.085 3 0.021847 22725 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.841 22.513 0 189.59 179.06 0 154.81 0 0 181 176 0 148 0 0 1 1 0 1 0 9750.4 17774 1334 17102 41079 47582 47582 1 SLLIGCQVTGK Unmodified 1174.638 0.63799361 3247 Q9JM63 Kcnj10 ATP-sensitive inward rectifier potassium channel 10 yes yes 0 0 0 0 10 0 1 62.062 62.062 2 0.0021972 16946 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.625 40.901 20.207 0 30.194 0 47.467 18.9 19 0 28 0 46 19 1 0 1 0 1 1 3830.8 17775 3247 17103 41080 47583 47583 1 SLLINAVEASCIR Unmodified 1444.7708 0.77079869 2808 Q922Q4;Q922W5 Pycr2;Pycr1 Pyrroline-5-carboxylate reductase 2;Pyrroline-5-carboxylate reductase 1, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 72.651 72.651 3 0.0014698 21852 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.287 39.17 20.244 28.427 0 0 27.631 48.248 19 28 0 0 28 46 1 1 0 0 1 1 4686.6 17776 2808 17104 41081;41082 47584;47585 47585 2 SLLIPYLDNLVK Unmodified 1386.8123 0.8122528 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 11 0 1 92.331 92.331 3 0.00034855 29689 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.536 43.681 9.657 0 0 20.234 28.359 0 9 0 0 19 28 0 1 0 0 1 1 0 3234.1 17777 2422 17105 41083 47586 47586 1 SLLLIGSPTWK Unmodified 1213.7071 0.70705945 1252 Q8VCU2;O70362 Gpld1 Phosphatidylinositol-glycan-specific phospholipase D yes no 0 0 0 0 8.33 5.19 1 2 80.649 80.649 2;3 0.00027242 22018 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.015 41.466 0 29.659 38.255 0 0 29.848 0 28 37 0 0 28 0 1 2 0 0 1 4657.6 17778 1252 17106 41084;41085;41086 47587;47588;47589 47589 3 SLLLLAK Unmodified 756.51093 0.51092582 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 8.67 5.44 1 1 1 71.758 71.758 2 0.027317 18452 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.262 16.671 741.56 150.92 153.14 991.77 829.2 143.58 692 148 158 930 841 139 2 2 2 3 3 2 96666 17779 3391 17107 41087;41088;41089 47590;47591;47592 47591 3 SLLLSVNAR Unmodified 971.57638 0.57637963 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 11 0 1 58.747 58.747 2 0.00041953 15135 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.24 83.408 107.92 117.77 157.43 132.71 0 0 102 120 158 130 0 0 1 1 1 1 0 0 20928 17780 2408 17108 41090 47593 47593 1 SLLLVDQLIDL Unmodified 1240.7279 0.72785447 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 111.5 111.5 2 0.00042381 37107 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 50.382 18.94 4.874 16.919 12.073 10.062 14.756 18 5 16 12 10 14 5 2 4 4 3 4 16667 17781 1983 17109 41091;41092;41093;41094 47594;47595;47596;47597;47598;47599;47600;47601 47597 8 SLLLVLQSPPN Unmodified 1179.6863 0.68632401 862 E9PZ88;F8WIE1;Q91W89 Man2c1 Alpha-mannosidase;Alpha-mannosidase 2C1 yes no 0 0 0 0 11.5 0.5 1 1 88.784 88.784 2 5.9654E-05 28458 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 98.033 70.971 44.883 56.558 0 0 73.22 0 42 56 0 0 70 0 1 2 0 0 2 0 9600.3 17782 862 17110 41095;41096 47602;47603 47602 2 SLLNAFTK Unmodified 892.50182 0.5018177 2343 Q80Z38 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes yes 0 0 0 0 12 0 1 69.363 69.363 2 0.037655 17502 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.657 27.628 0 48.104 50.226 46.454 44.158 53.106 0 46 51 46 46 51 0 1 1 1 1 1 3014 17783 2343 17111 41097 47604 47604 1 SLLNEGDGEPR Unmodified 1185.5626 0.56258006 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 4.5 0.5 1 1 46.567 46.567 2 0.00044971 14613 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.465 41.299 69.201 7.4206 85.201 85.554 62.749 38.183 65 9 83 84 65 37 2 1 2 2 2 1 6559.8 17784 556 17112 41098;41099 47605;47606 47605 2 SLLPGCQSVISR Unmodified 1315.6918 0.69182009 3147 Q9DCM0 Ethe1 Persulfide dioxygenase ETHE1, mitochondrial yes yes 0 0 0 0 9 0 1 58.13 58.13 2 5.7504E-09 17007 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.25 48.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17785 3147 17113 41100 47607 47607 1 SLLQALNEVK Unmodified 1113.6394 0.63937381 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11.5 1.5 1 1 75.574 75.574 2;3 8.7949E-06 22980 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.55 77.764 0 48.234 42.463 108.12 0 0 0 46 46 102 0 0 0 1 1 2 0 0 16494 17786 3204 17114 41101;41102 47608;47609;47610 47609 3 SLLQGTILQYVK Unmodified 1361.7919 0.79185171 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 12 0 1 83.787 83.787 3 0.00017731 23210 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.492 46.741 0 0 47.688 46.779 34.903 48.04 0 0 46 46 37 46 0 0 1 1 1 1 4465.3 17787 2282;2057 17115 41103 47611 47611 1 SLLQSALDFLAGPGSLGGAAGR Acetyl (Protein N-term) 2099.1011 0.10111761 171 A0A0R4J0F6;Q99KY4;A0A0G2JGP6;A0A0G2JEW6;D6RHK5 Gak Cyclin-G-associated kinase yes no 1 0 0 0 11 0 1 123.43 123.43 2 4.1508E-14 38962 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.035 62.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1125.8 17788 171 17116 41104 47612 47612 1 SLLQVLGSVK Unmodified 1042.6386 0.63864553 268 A0A1C7CYU5;J3QP99;Q3U2I3 Fam160a2 FTS and Hook-interacting protein yes no 0 0 0 0 12 0 1 80.669 80.669 3 0.0040418 22052 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.542 26.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17789 268 17117 41105 47613 47613 1 SLLQWVTSR Unmodified 1088.5978 0.59784335 2599 Q8K2I1;D3YWJ4 Fntb Protein farnesyltransferase subunit beta yes no 0 0 0 0 1 0 1 76.681 76.681 2 0.021101 26549 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.064 26.342 39.564 27.124 0 29.762 44.743 58.419 37 28 0 28 46 56 1 1 0 1 1 1 3443.9 17790 2599 17118 41106 47614 47614 1 SLLSDPTYR Unmodified 1050.5346 0.53457439 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 52.529 52.529 2 0.00017359 15780 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.41 95.897 504.13 467.21 441.83 248.06 593.63 474.49 473 478 434 241 594 461 2 3 2 2 3 3 69494 17791 2092 17119 41107;41108;41109 47615;47616;47617 47615 3 SLLSGLLIK Unmodified 942.61137 0.61136815 3330 Q9WUA6 Akt3 RAC-gamma serine/threonine-protein kinase yes yes 0 0 0 0 6.5 5.5 1 1 81.82 81.82 2;3 0.0035784 28717 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.621 26.576 0 38.901 27.962 28 0 69.29 0 37 28 28 0 65 0 1 1 1 0 1 6364.9 17792 3330 17120 41110;41111 47618;47619 47618 2 SLLSGLLK Unmodified 829.5273 0.52730417 1498 P31750;D3Z783 Akt1 RAC-alpha serine/threonine-protein kinase yes no 0 0 0 0 6.5 5.5 1 1 76.171 76.171 2;3 0.0051902 20065 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.109 10.071 39.701 38.394 58.288 0 47.137 67.945 37 37 56 0 46 65 1 1 1 0 1 2 5016.1 17793 1498 17121 41112;41113 47620;47621;47622 47622 3 SLLSSASATVATVGQGISNVIEK Unmodified 2231.2009 0.20089124 2706 Q8VE88 Fam114a2 Protein FAM114A2 yes yes 0 0 0 0 10.5 0.5 1 1 93.29 93.29 4 2.003E-06 30477 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.779 31.769 39.564 27.124 0 0 0 37 37 28 0 0 0 37 1 1 0 0 0 1 6424.9 17794 2706 17122 41114;41115 47623;47624 47623 2 SLLTSTINSIK Unmodified 1175.6762 0.67615325 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 11.5 0.5 1 1 71.105 71.105 2 0.0033728 18232 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.524 30.495 29.856 37.355 0 39.472 51.533 0 28 37 0 37 51 0 1 1 0 1 1 0 17916 17795 728 17123 41116;41117 47625;47626 47626 2 SLLTSTINSIKK Unmodified 1303.7711 0.77111627 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 1 6.5 5.5 1 1 66.37 66.37 3 6.2152E-06 16277 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.14 80.108 139.16 64.479 0 189.69 142.14 145.67 130 65 0 176 149 139 2 1 0 2 2 1 15826 17796 728 17124 41118;41119 47627;47628 47628 2 SLLTYGR Unmodified 808.4443 0.44430282 2998 Q9CZ13;A0A0A6YWX6 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 50.801 50.801 2 0.0063889 11971 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.23 82.58 834.53 646.44 1235.7 686.1 794.79 1046.5 786 658 1210 698 810 1003 4 3 5 4 3 4 253920 17797 2998 17125 41120;41121;41122 47629;47630;47631;47632;47633 47631 5 SLLVAGAAQYDCFFQHLR Unmodified 2095.0309 0.030929558 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 12 0 1 81.388 81.388 3 9.1672E-05 22385 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.173 41.787 20.292 38.591 28.285 18.546 28.436 29.848 19 38 28 19 28 28 1 2 1 1 1 1 2116 17798 934 17126 41123 47634;47635 47634 2 SLLVIPNTLAVNAAQDSTDLVAK Unmodified 2352.29 0.2900406 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 10 1.87 1 1 1 1 89.77 89.77 3;4 3.8002E-19 32517 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.905 65.749 0 108.53 0 139.8 63.878 49.036 0 102 0 129 65 46 0 3 0 2 1 1 17028 17799 1356 17127 41124;41125;41126;41127 47636;47637;47638;47639 47636 4 SLLVQTK Unmodified 787.48035 0.48035398 1467 P27659 Rpl3 60S ribosomal protein L3 yes yes 0 0 0 0 10.5 0.5 1 1 52.474 52.474 2 0.012879 12601 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 116.9 42.929 48.91 110.86 45.357 46.019 82.735 117.03 46 108 46 46 83 112 1 2 1 1 1 2 22740 17800 1467 17128 41128;41129 47640;47641 47641 2 SLLVTELGSSR Unmodified 1160.6401 0.6401021 2819 Q924B0;O55023;Q80ZJ2 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 10 2.16 1 1 1 62.669 62.669 2 3.5509E-20 19804 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 174.98 121.43 0 86.717 250.65 110.2 172.43 192.29 0 83 241 111 176 185 0 1 2 1 2 2 32240 17801 2819 17129 41130;41131;41132 47642;47643;47644 47642 3 SLLVVCSK Unmodified 904.50519 0.50518852 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 11 0 1 59.068 59.068 2 0.014296 15311 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 85.676 39.958 103.4 0 115.25 0 0 0 97 0 107 0 0 0 1 0 1 0 0 0 13361 17802 2790 17130 41133 47645 47645 1 SLMDEVVK Unmodified 919.46847 0.46846866 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 9.75 3.27 1 1 2 62.344 62.344 2;3 0.0011058 20448 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 145.63 39.686 508.9 143.17 610.43 36.943 432.58 531.32 478 158 576 37 431 510 3 1 4 1 3 3 87855 17803 1334 17131 41134;41135;41136;41137 47646;47647;47648;47649 47647 4 SLMPQVIGLLR Unmodified 1225.7217 0.72166366 3405 yes no 0 0 0 0 8 0 1 62 62 3 0.035106 19532 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.727 3.169 78.584 102.38 50.646 76.474 73.891 0 74 102 56 74 74 0 1 1 1 1 1 0 24954 + 17804 3405 17132 41138 47650 47650 1 SLMWVNK Unmodified 876.45276 0.45275902 2050 Q5M8N0 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes yes 0 0 0 0 9.17 3.72 1 2 2 1 63.886 63.886 2;3 1.0115E-06 17762 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.96 62.121 153.24 141.3 382.22 518.33 99.878 239.13 144 144 372 507 102 227 2 2 2 5 2 3 102040 17805 2050 17133 41139;41140;41141;41142;41143;41144 47651;47652;47653;47654;47655;47656 47653 6 SLNAGAYSK Unmodified 909.4556 0.45559579 1268 O88531;B1B0P8;B1B0P9 Ppt1 Palmitoyl-protein thioesterase 1 yes no 0 0 0 0 7.5 0.5 1 1 45.571 45.571 2;3 0.0062816 12558 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.763 28.768 49.026 135.01 0 0 131.72 124.16 46 130 0 0 130 120 1 2 0 0 2 2 6995 17806 1268 17134 41145;41146 47657;47658 47657 2 SLNDITK Unmodified 789.42323 0.42323303 3110 Q9DB20;A0A338P776;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 50.342 50.342 2 0.022572 14640 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.06 27.21 436.45 240.86 380.02 155.18 401.43 469.31 410 260 373 158 406 451 2 2 2 1 2 2 42001 17807 3110 17135 41147;41148 47659;47660 47659 2 SLNDITKR Unmodified 945.52434 0.52434406 3110 Q9DB20;A0A338P776;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 1 8 0 1 42.705 42.705 3 0.026048 10392 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.184 13.761 242.86 241.83 275.54 238.03 360.21 340.44 229 247 279 239 366 329 1 1 1 1 1 1 32407 17808 3110 17136 41149 47661 47661 1 SLNILTAFR Unmodified 1033.592 0.59202969 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 0 12 0.816 1 1 1 75.493 75.493 2 0.010773 22385 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.424 44.617 69.745 0 373.27 192.37 94.662 431.16 65 0 359 176 93 407 1 0 2 2 1 4 94262 17809 1649 17137 41150;41151;41152 47662;47663;47664;47665;47666 47662 5 SLNLLVSHFMENER Unmodified 1687.8352 0.83518986 954 Q8CHT1;E9QK62 Ngef Ephexin-1 yes no 0 0 0 0 9 0 1 74.292 74.292 3 0.052938 24635 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.711 20.68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17810 954 17138 41153 47667 47667 1 SLNNQFASFIDK Unmodified 1382.683 0.68302954 657 CON__P04264 no no 0 0 0 0 9.25 2.28 1 1 1 1 73.161 73.161 2;3 2.2165E-19 24141 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.38 80.053 265.32 259.4 436.87 334.75 83.542 393.1 250 260 426 325 93 371 4 5 5 5 2 5 51313 + 17811 657 17139 41154;41155;41156;41157 47668;47669;47670;47671;47672;47673 47672 6 SLNPELGTDADKEQWK Unmodified 1829.8796 0.8795571 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 1 8.5 3.25 1 1 2 2 59.93 59.93 3;4 4.3942E-11 20843 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.31 94.267 447.64 325.69 688.24 708.89 981.75 709.51 420 314 669 701 993 685 3 3 4 5 6 4 167620 17812 1315 17140 41158;41159;41160;41161;41162;41163 47674;47675;47676;47677;47678;47679 47679 6 SLNSEMDNILANLR Unmodified 1588.7879 0.78790532 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 7 0 1 83.476 83.476 3 3.2365E-05 30259 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.505 63.474 0 9.2416 20.004 0 0 0 0 9 19 0 0 0 0 1 1 0 0 0 3013.8 17813 2435 17141 41164 47680 47680 1 SLNVESNFITGTGILALVEALR Unmodified 2316.2689 0.26891122 3232 Q9JKK7 Tmod2 Tropomodulin-2 yes yes 0 0 0 0 10.8 1.33 1 1 2 1 110.77 110.77 3;4 3.7585E-16 37700 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.3 83.752 5.365 3.192 3.0627 4.1143 15.225 10.33 5 3 3 4 15 10 1 1 1 1 3 2 11030 17814 3232 17142 41165;41166;41167;41168;41169 47681;47682;47683;47684;47685;47686 47681 6 SLNYWSNLLGMK Unmodified 1424.7122 0.71222118 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 4.67 5.19 2 1 87.615 87.615 2;3 2.3494E-11 24341 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 116.74 76.735 59.859 39.967 66.324 66.388 37.434 0 56 38 65 65 37 0 1 2 2 3 1 0 8574.2 17815 2899 17143 41170;41171;41172 47687;47688;47689 47689 3 SLPAPLGTIGAWLYR Unmodified 1613.893 0.89296274 305 A0A1L1STC6;Q6ZWR6;Q6ZWR5 Syne1 Nesprin-1 yes no 0 0 0 0 12 0 1 92.536 92.536 3 0.055737 26495 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 31.596 15.458 0 29.792 0 0 0 40.508 0 28 0 0 0 38 0 1 0 0 0 1 1111.5 17816 305 17144 41173 47690 47690 1 SLPASLVEPDFVMTDFAK Unmodified 1965.9758 0.97576567 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7.86 2.23 2 2 2 1 91.143 91.143 3;4 9.2387E-10 34534 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.33 87.038 110.25 73.82 73.327 89.099 138.32 165.6 103 74 70 84 140 160 4 5 3 4 6 8 34124 17817 1876 17145 41174;41175;41176;41177;41178;41179;41180 47691;47692;47693;47694;47695;47696;47697;47698;47699;47700;47701 47692 11 SLPCDICK Unmodified 991.44669 0.44668736 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 8.67 3.09 1 1 1 52.457 52.457 2;3 0.010335 16565 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.546 23.398 413.05 311.22 466.84 373.13 664.86 484.82 389 322 466 373 663 470 3 2 3 2 2 2 48465 17818 859 17146 41181;41182;41183 47702;47703;47704 47702 3 SLPDLGLR Unmodified 869.49707 0.49706667 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 8 0 1 62.277 62.277 2 0.033075 19632 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.464 35.336 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17819 974 17147 41184 47705 47705 1 SLPEIDGLSK Unmodified 1057.5655 0.56554017 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 0 9.33 2.62 1 1 1 65.623 65.623 2;3 1.5669E-06 23687 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.27 72.615 98.129 65.144 43.493 47.686 46.807 87.142 92 65 46 46 46 83 2 1 1 1 1 2 8746.5 17820 2301;365;912 17148 41185;41186;41187 47706;47707;47708 47708 3 SLPGVVTR Unmodified 827.4865 0.48650199 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 8 0.816 1 1 1 47.341 47.341 2 0.0061549 13291 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.12 49.148 350.33 406.25 444.52 437.52 317.83 545.25 330 411 453 430 331 520 2 3 3 3 2 3 117420 17821 1814 17149 41188;41189;41190 47709;47710;47711 47709 3 SLPMGCYFNIYGFGSSYEK Unmodified 2218.9704 0.97036272 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 10 0 1 87.636 87.636 3 0.002102 28235 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.164 28.394 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17822 2841 17150 41191 47712 47712 1 SLPSLQILLTNTK Unmodified 1426.8395 0.83953018 77 A0A0G2JDI0;D3YV77;Q3UEB4;Q9R008 Mvk Mevalonate kinase yes no 0 0 0 0 11.5 0.5 1 1 83.928 83.928 3 0.00014835 26276 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.976 48.371 68.588 122.6 90.598 27.923 0 0 65 121 92 28 0 0 2 2 2 1 0 0 7149.7 17823 77 17151 41192;41193 47713;47714 47713 2 SLPSVETLGCTSVICSDK Unmodified 1951.9231 0.92307817 1242 O55143;Q8R429;B1ATS4;B1ATS5;E9Q559;Q64518 Atp2a2;Atp2a1;Atp2a3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 0 7 0 1 71.131 71.131 3 9.2667E-06 24461 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.564 40.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17824 1242 17152 41194 47715 47715 1 SLPVATGEPK Unmodified 997.54441 0.5444108 2784 Q91ZP9 Necab2 N-terminal EF-hand calcium-binding protein 2 yes yes 0 0 0 0 7 0 2 50.834 50.834 2;3 0.0047974 14922 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.908 36.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17825 2784 17153 41195;41196 47716;47717 47717 2 SLPVSVPVWAFK Unmodified 1328.7493 0.74925861 233 A0A140LHA0;F6R8S6;E9QKI5;E9QKI4;Q9D1F4 Akt1s1 Proline-rich AKT1 substrate 1 yes no 0 0 0 0 11.5 0.5 1 1 85.676 85.676 2;3 6.549E-13 27068 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.7 89.658 0 0 0 25.625 32.295 0 0 0 0 24 32 0 0 0 0 1 1 0 15647 17826 233 17154 41197;41198 47718;47719 47718 2 SLQADTTNTDTALTTLEEALADKER Unmodified 2706.3196 0.3195624 1027 V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1;V9GX53 Erc1 ELKS/Rab6-interacting/CAST family member 1 yes no 0 0 0 1 5 0 1 84.624 84.624 4 0.0098663 32136 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.614 12.608 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 1953.9 17827 1027 17155 41199 47720 47720 1 SLQALGEVIEAELR Unmodified 1526.8304 0.83042206 839 Q8C0C7;E9PWY9;D6RIJ2 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 0 6 0 2 92.567 92.567 2;3 0.0060589 34959 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.926 27.851 9.5851 14.25 0 0 0 24.518 9 14 0 0 0 23 1 1 0 0 0 1 2662.6 17828 839 17156 41200;41201 47721;47722 47721 2 SLQDIIAILGMDELSEEDK Unmodified 2118.0402 0.04021642 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.5 2.06 2 1 1 106.77 106.77 3;4 5.7722E-08 36677 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 83.213 60.411 36.37 8.2041 33.291 24.068 42.874 36.529 34 9 31 23 43 35 2 1 3 2 3 2 4959.7 17829 1642 17157 41202;41203;41204;41205 47723;47724;47725;47726 47723 4 SLQDIIAILGMDELSEEDKLTVSR Oxidation (M) 2690.3684 0.36842685 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 1 1 7 0 1 97.787 97.787 4 3.7183E-09 35919 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.207 52.653 0 0 9.738 0 28.291 29.041 0 0 9 0 28 28 0 0 1 0 1 1 2351.8 17830 1642 17158 41206 47727 47727 112 1 SLQDIIAILGMDELSEEDKLTVSR Unmodified 2674.3735 0.37351223 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 9.29 2.43 2 2 1 2 101.58 101.58 3;4 1.4585E-18 36780 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.75 89.345 111.17 41.346 185.7 87.506 130.77 12.792 105 40 178 89 129 12 3 3 4 2 3 1 68632 17831 1642 17158 41207;41208;41209;41210;41211;41212;41213 47728;47729;47730;47731;47732;47733;47734 47728 7 SLQEFAAVLR Unmodified 1132.6241 0.6240581 946 E9QAQ3;Q6ZQ82;D3Z1X5 Arhgap26 Rho GTPase-activating protein 26 yes no 0 0 0 0 8 0 1 73.989 73.989 2 0.029554 25172 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.174 13.366 49.026 65.854 0 0 67.99 0 46 65 0 0 65 0 1 1 0 0 1 0 3514.3 17832 946 17159 41214 47735 47735 1 SLQEQADAAEER Unmodified 1345.611 0.61098681 1106;1107;906 E9Q453;S4R261;G5E8R0;E9Q455;G5E8R1 Tpm1 no no 0 0 0 0 4.75 4.82 1 1 1 1 39.485 39.485 2 3.0894E-72 10989 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 216.53 162.12 182.82 171.23 222.49 129.99 154.76 191.66 172 171 218 130 153 182 4 5 4 3 4 3 141790 17833 906;1106;1107 17160 41215;41216;41217;41218 47736;47737;47738;47739;47740;47741 47736 6 SLQGLAGEIVGEVR Unmodified 1426.778 0.77799256 1991 Q3UJU9 Rmdn3 Regulator of microtubule dynamics protein 3 yes yes 0 0 0 0 7 0 1 77.917 77.917 3 0.036804 27649 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.029 15.159 20.171 7.7188 29.731 0 28.62 19.437 19 9 28 0 28 19 1 1 1 0 1 1 1584.4 17834 1991 17161 41219 47742 47742 1 SLQQLAEER Unmodified 1072.5513 0.55128709 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 5 0.816 1 1 1 50.702 50.702 2 2.7987E-25 16610 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 191.67 96.861 443.98 350.46 285.5 341.75 276.9 262.9 417 362 288 333 278 250 4 4 3 4 2 2 126610 17835 551 17162 41220;41221;41222 47743;47744;47745;47746 47743 4 SLQTDSSNTDTALATLEEALSEK Unmodified 2423.1551 0.15512284 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 4.5 0.5 1 1 92.152 92.152 3 7.2486E-07 34033 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.964 45.132 9.6187 0 11.444 0 9.414 0 9 0 11 0 9 0 1 0 2 0 1 0 2488.6 17836 2249 17163 41223;41224 47747;47748 47747 2 SLQTYLK Unmodified 851.47527 0.4752686 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 10 0 1 57.579 57.579 2 0.053011 14942 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.248 19.694 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17837 934 17164 41225 47749 47749 1 SLSALGNVISALAEGSTYVPYR Unmodified 2267.1798 0.17976186 2139 Q61768;E9QAK5 Kif5b Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 0 11.5 0.5 1 1 100.56 100.56 3 2.6989E-18 28507 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.44 99.247 15.657 9.576 0 5.465 0 23.924 15 9 0 5 0 23 2 1 0 1 0 3 13292 17838 2139 17165 41226;41227 47750;47751;47752;47753 47752 4 SLSALGNVISALAEGTK Unmodified 1629.8938 0.8937506 1481;1507 P28738;P33175 Kif5c;Kif5a Kinesin heavy chain isoform 5C;Kinesin heavy chain isoform 5A no no 0 0 0 0 11 0.816 1 1 1 95.126 95.126 2;3 3.7619E-06 30974 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.666 69.458 9.6187 65.371 46.914 42.401 5.8424 65.925 9 64 47 41 6 62 1 2 2 1 1 2 36351 17839 1481;1507 17166 41228;41229;41230 47754;47755;47756;47757 47756 4 SLSAQEEK Unmodified 890.43453 0.434526 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8 3.56 1 1 1 38.59 38.59 2;3 0.0012532 10549 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.74 62.893 751.28 676.76 657.92 702.17 796.16 914.3 707 694 678 692 822 879 3 3 3 3 3 3 90877 17840 551 17167 41231;41232;41233 47758;47759;47760 47758 3 SLSCTQEDR Unmodified 1094.4662 0.46623683 2429 Q8BLV3 Slc9a7 Sodium/hydrogen exchanger 7 yes yes 0 0 0 0 4 0 1 31.411 31.411 2 0.023657 7570 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.78 34.525 0 20.216 0 8.9519 47.055 18.911 0 19 0 9 46 19 0 1 0 1 1 1 1679.9 17841 2429 17168 41234 47761 47761 1 SLSDALISLQMVYPR Unmodified 1691.8916 0.89164211 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 11.3 1.25 1 1 1 89.817 89.817 2;3 0.00028621 28789 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.402 68.283 29.635 36.74 86.734 40.416 0 128.99 28 37 84 38 0 121 1 1 3 1 0 3 13006 17842 513 17169 41235;41236;41237 47762;47763;47764;47765 47764 4 SLSDEDLK Unmodified 905.43419 0.43419164 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 9 4 1 1 49.97 49.97 2;3 0.0031768 16124 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.241 13.928 69.076 189.87 202.16 201.95 252.22 0 65 186 206 195 250 0 1 2 2 1 2 0 18618 17843 814 17170 41238;41239 47766;47767 47766 2 SLSDSESDDSK Unmodified 1168.4732 0.47315593 3141 Q9DCC5;P23198;D3Z313 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 0 3 0 1 39.434 39.434 3 0.00022119 11730 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.596 62.082 0 0 47.659 47.438 0 59.696 0 0 46 46 0 56 0 0 1 1 0 1 5278.1 17844 3141 17171 41240 47768 47768 1 SLSDTIEK Unmodified 891.45493 0.45492709 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 5 0 1 51.661 51.661 3 0.010617 16650 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.962 0 29.856 37.355 0 39.227 64.567 47.194 28 37 0 37 65 46 1 1 0 1 1 1 7133.5 17845 895 17172 41241 47769 47769 1 SLSELLGPYGMK Unmodified 1293.6639 0.663874 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 9.75 0.829 2 1 1 80.362 80.362 2;3 1.0351E-11 27563 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.73 90.311 88.298 63.931 231.02 37.1 57.607 236.07 83 65 219 37 56 223 2 2 4 1 1 3 24376 17846 513 17173 41242;41243;41244;41245 47770;47771;47772;47773 47771 4 SLSESYELSSDLQDK Unmodified 1699.7788 0.77884 281 A0A1D5RM83;E9PUA3;Q8R0S2;A0A0R4J1U6 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 4 0 1 65.291 65.291 3 0.00019749 23277 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.927 48.852 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 4228.7 17847 281 17174 41246 47774 47774 1 SLSFPILNPALSQSSQPSPPLPGSHGR Unmodified 2770.4402 0.44022708 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 10.5 0.5 1 1 75.194 75.194 4 4.5456E-06 22273 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.621 37.89 39.564 47.34 0 0 0 89.544 37 47 0 0 0 84 1 2 0 0 0 2 8274.8 17848 2363 17175 41247;41248 47775;47776 47776 2 SLSGLILK Unmodified 829.5273 0.52730417 2863;2365 Q99LG2;E9PV58;A0A1B0GT37;Q8BFY9;Q3TKD0;J3QMX2 Tnpo2;Tnpo1 Transportin-2;Transportin-1 no no 0 0 0 0 10.5 0.5 1 1 69.383 69.383 2 0.0054193 19609 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.794 25.788 0 145.78 126.49 121.79 155.4 124.55 0 139 130 121 158 121 0 1 1 1 1 1 13117 17849 2863;2365 17176 41249;41250 47777;47778 47778 2 SLSGPGQ Unmodified 644.31295 0.3129543 1126 H7BWZ3;Q9JM76;D3Z2F7;D3Z2F8 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 5.5 0.5 1 1 39.415 39.415 2 0.010416 10400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.15 120.95 215.86 228.97 134.99 213.44 79.185 254.65 203 231 139 204 83 241 2 2 1 2 1 2 40543 17850 1126 17177 41251;41252 47779;47780 47780 2 SLSLCNMFLDEMAK Unmodified 1657.7514 0.75138516 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 9 0 1 87.694 87.694 3 0.01245 30882 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.317 29.117 0 0 0 0 47.467 18.9 0 0 0 0 46 19 0 0 0 0 1 1 1459.9 17851 513 17178 41253 47781 47781 1 SLSLGGHVGFDSLPDQLVSK Unmodified 2055.0637 0.063669474 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 8 0 1 74.755 74.755 3 4.6977E-06 25553 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.792 43.299 20.387 0 0 0 37.054 47.979 19 0 0 0 37 46 1 0 0 0 1 1 5326.6 17852 575 17179 41254 47782 47782 1 SLSLNNNK Unmodified 888.46649 0.46649483 482 A2AKH7;Q8JZX5;Q9D1G5 Lrrc57 Leucine-rich repeat-containing protein 57 yes no 0 0 0 0 8 0 1 45.902 45.902 2 0.013464 12024 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.181 34.545 0 38.414 57.075 27.202 0 69.29 0 37 56 28 0 65 0 1 1 1 0 1 2717.2 17853 482 17180 41255 47783 47783 1 SLSPIIGK Unmodified 813.496 0.49600404 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 10 0.816 1 1 1 59.72 59.72 2 0.0062124 15406 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.86 43.18 226.01 207.19 251.47 172.91 106.84 373.25 213 213 250 166 111 353 2 2 2 2 1 3 84939 17854 526 17181 41256;41257;41258 47784;47785;47786 47786 3 SLSQNYGVLK Unmodified 1107.5924 0.59242362 2116 Q61171;D3Z4A4 Prdx2 Peroxiredoxin-2 yes no 0 0 0 0 8.67 3.77 1 1 1 1 1 1 56.705 56.705 2;3 3.3017E-16 17079 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 179.1 113.03 592.34 643.65 609.92 835.97 578.36 746.56 556 643 602 799 604 717 3 4 5 4 3 5 190380 17855 2116 17182 41259;41260;41261;41262;41263;41264 47787;47788;47789;47790;47791;47792;47793 47788 7 SLSSPTDNLELSAR Unmodified 1488.742 0.74200098 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 5 0 1 57.112 57.112 3 0.017614 19363 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.983 16.752 0 0 0 70.403 34.147 38.468 0 0 0 65 37 37 0 0 0 1 1 1 2060.8 17856 2046 17183 41265 47794 47794 1 SLSSPTVTLSAPLEGAK Unmodified 1656.8934 0.89341625 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 8 0 1 68.701 68.701 3 4.653E-06 22660 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.354 49.156 0 59.584 0 48.914 72.519 76.815 0 56 0 46 74 74 0 1 0 1 1 1 2601.7 17857 844 17184 41266 47795 47795 1 SLSSYNYIR Unmodified 1101.5455 0.54547343 2069 Q5SYD0 Myo1d Unconventional myosin-Id yes yes 0 0 0 0 8 0 1 52.154 52.154 2 0.063887 14893 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.722 13.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17858 2069 17185 41267 47796 47796 1 SLSTSGESLYHVLGLDK Unmodified 1804.9207 0.92069363 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 0 8 0 1 75.704 75.704 3 3.8999E-06 25984 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.819 53.241 39.207 56.351 35.224 27.648 45.536 38.143 37 56 37 28 46 37 1 1 1 1 1 1 2266.8 17859 1682 17186 41268 47797 47797 1 SLSTYSAAALQSDLEDSLYK Unmodified 2161.0427 0.042659261 573 B1AQX9;B1AQX6;B1AQX7 Srcin1 yes no 0 0 0 0 6.5 0.5 1 1 84.649 84.649 3;4 0.051895 31442 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 27.96 18.398 29.789 56.317 75.249 28.948 37.054 47.979 28 56 74 28 37 46 1 2 2 1 1 1 8600.5 17860 573 17187 41269;41270 47798;47799 47798 2 SLSVIASAK Unmodified 874.51238 0.51238239 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 10 0 1 56.743 56.743 2 0.00068605 14509 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.07 50.755 98.78 79.949 101.81 73.084 91.961 57.072 93 83 102 74 93 56 1 1 1 1 1 1 4049.3 17861 2499 17188 41271 47800 47800 1 SLTAVLSAELNK Unmodified 1244.6976 0.69761697 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 8.67 3.77 1 1 1 1 1 1 77.331 77.331 2;3 4.1141E-12 26083 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.1 75.68 108.83 112.99 110.52 167.94 73.446 77.624 102 112 112 159 75 74 4 4 4 4 3 2 14728 17862 2886 17189 41272;41273;41274;41275;41276;41277 47801;47802;47803;47804;47805;47806 47803 6 SLTDLNQDPSR Unmodified 1244.5997 0.59969384 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 5.5 0.5 1 1 47.719 47.719 2 0.0017549 14878 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.507 49.787 20.014 18.075 75.933 66.204 16.771 59.217 19 19 74 65 19 56 1 1 2 2 1 2 6147.6 17863 107 17190 41278;41279 47807;47808 47807 2 SLTEYLQNVEQK Unmodified 1450.7304 0.73037367 2139 Q61768 Kif5b Kinesin-1 heavy chain yes yes 0 0 0 0 7 0 1 72.147 72.147 3 0.013481 24799 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.28 23.082 0 28.842 56.81 46.052 44.69 38.167 0 28 56 46 46 37 0 1 1 1 1 1 7308 17864 2139 17191 41280 47809 47809 1 SLTHTQAASLPYVALTAWSAINK Unmodified 2442.2907 0.2907093 184 Q924D0;A0A0R4J0S3 Rtn4ip1 Reticulon-4-interacting protein 1, mitochondrial yes no 0 0 0 0 12 0 1 85.086 85.086 4 0.0023676 23827 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 39.625 23.682 29.635 36.74 37.68 0 37.714 28.772 28 37 37 0 37 28 1 1 1 0 1 1 1606.6 17865 184 17192 41281 47810 47810 1 SLTIAEFK Unmodified 907.50148 0.50148335 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 8.5 0.5 1 1 66.356 66.356 2;3 0.0050889 21576 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.89 37.22 199.18 78.933 85.505 136.99 188.61 231.27 186 83 83 130 185 222 2 1 1 2 1 2 9915.2 17866 3039 17193 41282;41283 47811;47812;47813 47811 3 SLTLFGQLLTK Unmodified 1219.7176 0.71762413 1802 P70206 Plxna1 Plexin-A1 yes yes 0 0 0 0 6.5 5.5 1 1 87.097 87.097 3 0.00075217 31053 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.721 36.88 20.244 47.851 47.384 27.443 46.556 39.18 19 47 46 28 47 38 1 2 1 1 2 2 7366.5 17867 1802 17194 41284;41285 47814;47815 47814 2 SLTLLQAVLPQIK Unmodified 1422.881 0.88100107 2060 Q5SSM3;F6T1Y2 Arhgap44 Rho GTPase-activating protein 44 yes no 0 0 0 0 6.5 5.5 2 2 93.032 93.032 2;3 4.9266E-13 32648 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.79 84.491 35.321 34.946 43.057 42.383 89.62 23.589 33 33 42 41 88 23 2 2 4 3 5 2 8046.9 17868 2060 17195 41286;41287;41288;41289 47816;47817;47818;47819;47820;47821;47822 47820 7 SLTLVSQK Unmodified 874.51238 0.51238239 3269 Q9QXW9 Slc7a8 Large neutral amino acids transporter small subunit 2 yes yes 0 0 0 0 9.5 0.5 1 1 54.378 54.378 3 0.012438 15219 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.962 24.317 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17869 3269 17196 41290;41291 47823;47824 47823 2 SLTMVALAK Unmodified 932.53649 0.53648865 3161 Q9EP89;A0A1L1SVF9 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial yes no 0 0 0 0 10 0 1 66.493 66.493 2 0.006812 18862 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.879 34.719 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17870 3161 17197 41292 47825 47825 1 SLTNDWEDHLAVK Deamidation (N) 1527.7205 0.72053726 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 1 0 0 8.5 4.5 1 1 64.371 64.371 3 0.00038254 23055 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.513 54.55 88.74 63.176 0 90.719 0 108.73 83 65 0 83 0 102 1 1 0 1 0 1 5594 17871 1354 17198 41293;41294 47826;47827 47826 424 2 SLTNDWEDHLAVK Unmodified 1526.7365 0.73652168 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 7 2.56 2 2 2 1 62.607 62.607 3;4 8.3434E-20 21309 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.54 108.16 662.16 746.47 692.2 1040 626.79 693.38 622 750 695 1000 646 660 6 9 7 10 6 7 131990 17872 1354 17198 41295;41296;41297;41298;41299;41300;41301 47828;47829;47830;47831;47832;47833;47834;47835;47836;47837 47833 10 SLTNDWEEHLAVK Unmodified 1540.7522 0.75217174 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 5.5 0.5 1 1 63.081 63.081 2;3 8.5772E-06 22172 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 105.03 84.922 117.73 139.12 113.47 0 158.92 174.55 111 140 112 0 157 168 3 3 2 0 2 3 38765 17873 1322 17199 41302;41303 47838;47839;47840 47838 3 SLTSNLPNVNLPNVNLPK Unmodified 1933.0633 0.063275544 2301 Q80TJ1;K4DI76;J3QJW3 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 9.8 1.72 1 2 1 1 78.778 78.778 3;4 1.8476E-07 24492 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.848 67.157 108.48 109.21 94.232 89.12 190.4 38.644 102 111 92 83 185 37 2 3 2 2 4 1 58282 17874 2301 17200 41304;41305;41306;41307;41308 47841;47842;47843;47844;47845 47844 5 SLTSPLDDTEVKK Unmodified 1431.7457 0.74568938 2399 Q8BH80;Q9QY76 Vapb Vesicle-associated membrane protein-associated protein B yes no 0 0 0 1 6 0 1 57.01 57.01 3 0.00088244 18667 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.033 37.975 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17875 2399 17201 41309 47846 47846 1 SLTTGETGYIPSNYVAPVDSIQAEEWYFGK Unmodified 3321.5718 0.57175434 1535 P39688;D3YZ57 Fyn Tyrosine-protein kinase Fyn;Non-specific protein-tyrosine kinase yes no 0 0 0 0 6 0 1 90.377 90.377 4 1.4203E-05 34132 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.511 29.992 14.916 4.073 14.429 29.744 0 20.254 14 5 14 28 0 19 1 1 1 2 0 2 1177.8 17876 1535 17202 41310 47847;47848 47847 2 SLTTLGK Unmodified 718.4225 0.42250475 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173;Q60575;A2AH75;E9Q9B0;O35071;Q3V3Y9 Kif1a;Kif1b;Kif1c Kinesin-like protein;Kinesin-like protein KIF1A;Kinesin-like protein KIF1B;Kinesin-like protein KIF1C yes no 0 0 0 0 9 0 1 51.852 51.852 2 0.036462 14042 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.119 12.332 324.5 216 282.01 312.77 375.63 400.76 305 228 287 308 386 386 1 1 1 1 1 1 36418 17877 24 17203 41311 47849 47849 1 SLVALLVETQMK Unmodified 1330.753 0.75302336 1989 Q3UID0;Q6PDG5;Q3UNN4;P97496 Smarcc2;Smarcc1 SWI/SNF complex subunit SMARCC2;SWI/SNF complex subunit SMARCC1 yes no 0 0 0 0 11 0 1 89.323 89.323 3 0.00061635 28546 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.121 27.818 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 2933.9 17878 1989 17205 41312 47850 47850 1 SLVANLAAANCYK Unmodified 1393.7024 0.70238478 1626 P55264;A0A286YCD7 Adk Adenosine kinase yes no 0 0 0 0 11 0.816 1 1 1 65.87 65.87 3 1.2225E-05 18072 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 104.17 85.116 89.059 85.974 255.3 285.03 191.68 214.08 83 83 250 278 194 203 1 1 2 3 2 2 41447 17879 1626 17206 41313;41314;41315 47851;47852;47853 47852 3 SLVDETPLDVCGDEEVR Unmodified 1931.8782 0.87823647 2816 Q923M0 Ppp1r16a Protein phosphatase 1 regulatory subunit 16A yes yes 0 0 0 0 2 0 1 67.743 67.743 3 0.0014825 24499 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 47.204 37.416 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1307.9 17880 2816 17207 41316 47854 47854 1 SLVEIADTVPK Unmodified 1170.6496 0.64960415 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 10 3 1 1 68.989 68.989 3 0.00011981 25529 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.058 48.748 89.059 0 0 80.882 0 0 83 0 0 74 0 0 1 0 0 1 0 0 5952 17881 2422 17208 41317;41318 47855;47856 47856 2 SLVGFGPPVPAK Unmodified 1167.6652 0.66519463 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 10.7 1.7 1 1 1 68.906 68.906 2;3 3.8963E-06 19948 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.69 66.609 49.134 98.952 37.646 158.02 79.845 166.15 46 93 37 148 83 158 1 1 1 3 1 2 29821 17882 573 17209 41319;41320;41321 47857;47858;47859;47860 47858 4 SLVIDEGEDDLGR Unmodified 1416.6733 0.67325272 3328 Q9WU84 Ccs Copper chaperone for superoxide dismutase yes yes 0 0 0 0 2.5 0.5 1 1 61.012 61.012 2 1.2583E-10 21627 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.9 86.49 0 20.216 0 0 8.3971 29.608 0 19 0 0 9 28 0 1 0 0 1 1 4920 17883 3328 17210 41322;41323 47861;47862 47862 2 SLVLPWSFPLEWAPQNLTR Unmodified 2253.1946 0.19462407 3180 Q9ER81 Tor1aip2 Torsin-1A-interacting protein 2, isoform IFRG15 yes yes 0 0 0 0 12 0 1 103.77 103.77 3 5.4395E-05 29046 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.814 36.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 959.79 17884 3180 17211 41324 47863 47863 1 SLVLTALQK Unmodified 971.60153 0.60153174 2723 Q8VI75;Q5U4C5;D6RES6;A0A2I3BRV3 Ipo4 Importin-4 yes no 0 0 0 0 12 0 2 69.258 69.258 2;3 3.1062E-05 17485 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 141.48 80.507 87.998 88.094 103.63 95.473 0 176.34 83 90 105 93 0 170 1 1 1 1 0 2 11865 17885 2723 17212 41325;41326 47864;47865 47864 2 SLVNLGGSK Unmodified 873.49198 0.4919813 657 CON__P04264 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 54.831 54.831 2 0.00093559 13661 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.38 21.302 277.26 255.99 0 217.61 291.07 420.67 259 250 0 203 297 407 3 3 0 3 3 4 75694 + 17886 657 17213 41327;41328;41329;41330 47866;47867;47868;47869;47870 47867 5 SLVQEMVGSFGK Unmodified 1280.6435 0.64347291 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 10 0 1 80.349 80.349 3 0.021421 25152 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.209 19.292 49.063 0 49.525 0 0 0 46 0 46 0 0 0 1 0 1 0 0 0 2308.5 17887 2216 17214 41331 47871 47871 1 SLVQGELVTASK Unmodified 1230.682 0.68196691 3276 Q9QYC0;F8WHZ9;F8WGR0;F6RDR0 Add1 Alpha-adducin yes no 0 0 0 0 8.5 2.69 1 1 1 1 59.341 59.341 2;3 1.94E-22 19044 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.51 88.294 118.37 177.49 321.09 190.73 127.42 321.49 111 177 315 186 130 305 1 3 4 3 2 4 45411 17888 3276 17215 41332;41333;41334;41335 47872;47873;47874;47875 47873 4 SLVSQPTAPNSEVPK Unmodified 1552.8097 0.80968662 1030 F8VPU2 Farp1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes yes 0 0 0 0 6 0 1 53.258 53.258 3 0.0075044 16893 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.252 30.848 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17889 1030 17216 41336 47876 47876 1 SLVSVTK Unmodified 732.43815 0.43815481 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 50.912 50.912 2 0.0085537 16584 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.28 17.354 1147.4 1585.5 1802 1969.4 1625.2 2018.5 1086 1589 1833 1942 1678 1937 4 4 5 6 4 5 391500 17890 1354 17217 41337;41338;41339;41340;41341 47877;47878;47879;47880;47881;47882 47882 6 SLVTLDGGK Unmodified 888.49165 0.49164694 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 0 0 0 8.67 2.05 2 2 1 1 56.896 56.896 2;3 0.00035001 17933 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.033 54.787 412.56 226.7 668 416.18 453.65 383.62 389 235 649 425 463 370 4 2 5 5 4 3 111340 17891 1352 17218 41342;41343;41344;41345;41346;41347 47883;47884;47885;47886;47887;47888 47884 6 SLVTVLGIPQKPIITGYK Unmodified 1926.1554 0.15538502 1152 K4DI58;Q99N28 Cadm3 Cell adhesion molecule 3 yes no 0 0 0 1 5.4 5.39 3 2 83.587 83.587 3;4 1.8364E-07 31468 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.317 72.498 910.29 489.93 879.32 753.54 1044.8 851.09 861 508 873 753 1055 822 9 5 10 9 10 7 93461 17892 1152 17219 41348;41349;41350;41351;41352 47889;47890;47891;47892;47893;47894;47895;47896;47897;47898;47899;47900;47901;47902 47893 14 SLWNDPGIQECYDR Unmodified 1751.7573 0.75733347 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 5.5 0.5 1 1 64.233 64.233 3 0.0007845 22612 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.861 53.579 187.58 113.08 116.74 120.58 192.51 172.53 176 120 120 120 195 167 2 2 2 2 2 2 10232 17893 1428 17220 41353;41354 47903;47904 47903 2 SLWPQIK Unmodified 870.49634 0.49633839 2548 Q8CHT0 Aldh4a1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 0 0 11 0 1 67.134 67.134 2 0.021458 18747 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.39 40.139 59.76 65.13 0 0 0 0 56 65 0 0 0 0 1 1 0 0 0 0 6435.8 17894 2548 17221 41355 47905 47905 1 SLYDDLGVETSDSK Acetyl (Protein N-term) 1569.7046 0.70461243 500 A2AP40;Q8JZX4 Rbm17 Splicing factor 45 yes no 1 0 0 0 2 0 1 75.351 75.351 2 1.744E-16 27217 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.451 48.673 0 9.576 0 0 9.0934 9.3345 0 9 0 0 9 9 0 1 0 0 1 1 999.64 17895 500 17222 41356 47906 47906 1 SLYLLINSK Unmodified 1049.6121 0.61209643 2316 Q80U95;A0A0G2JDR9 Ube3c Ubiquitin-protein ligase E3C yes no 0 0 0 0 6.5 5.5 1 1 74.967 74.967 2;3 0.02668 19729 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.518 29.861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17896 2316 17223 41357;41358 47907;47908 47908 2 SLYPSYK Unmodified 856.43307 0.43306943 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 9 0.707 1 2 1 52.427 52.427 2;3 0.0063853 14187 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.244 35.74 424.22 461.52 197.18 552.23 697.92 411.83 398 454 195 528 705 399 4 4 2 5 5 3 83829 17897 3307 17225 41359;41360;41361;41362 47909;47910;47911;47912;47913 47912 5 SLYSEPFK Unmodified 969.48075 0.48074791 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 7.5 0.5 1 1 59.551 59.551 2;3 0.0043698 18359 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.899 53.342 59.486 111.92 130.27 75.853 139.93 57.544 56 111 130 74 139 56 1 2 2 1 2 1 12372 17898 2295 17226 41363;41364 47914;47915 47915 2 SLYSEPFKECPK Unmodified 1483.7017 0.70171607 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 1 7 0 1 55.574 55.574 4 0.01798 17165 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.592 25.639 108.49 69.725 101.43 94.292 69.736 97.148 102 74 102 93 74 93 1 1 1 1 1 1 4533.6 17899 2295 17227 41365 47916 47916 1 SLYSMIK Unmodified 840.44153 0.44152563 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 10 0 1 64.123 64.123 2 0.052604 17791 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.854 25.728 69.221 103.86 0 0 0 99.138 65 102 0 0 0 93 1 1 0 0 0 1 9373.7 17900 1050;1380 17228 41366 47917 47917 1 SLYSSSPGGAYVTR Unmodified 1443.6994 0.69940789 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 8.8 2.23 2 1 1 1 49.916 49.916 2;3 5.3998E-07 14495 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.22 78.972 117.72 313.66 174.83 228.72 244.68 153.47 111 305 185 223 249 148 2 4 3 4 4 2 29213 17901 1423 17229 41367;41368;41369;41370;41371 47918;47919;47920;47921;47922 47918 5 SLYTYIQK Unmodified 1014.5386 0.53859714 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 10 0 1 62.858 62.858 2 0.016525 17272 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.642 28.171 82.021 0 100.92 57.056 75.286 76.736 77 0 96 59 77 74 1 0 1 1 1 1 7235.2 17902 568 17230 41372 47923 47923 1 SLYVAEYHSEPAEDEKP Unmodified 1962.8847 0.88470206 1624 P54823 Ddx6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 1 4 0 1 53.769 53.769 3 1.5473E-05 18125 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.8 75.206 29.904 27.776 0 30.604 0 0 28 28 0 28 0 0 1 1 0 1 0 0 4172.6 17903 1624 17231 41373 47924 47924 1 SLYYASFLEALVR Unmodified 1530.8082 0.80823006 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 11.7 0.471 1 2 95.446 95.446 2;3 2.9961E-18 27323 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 145.55 106.25 9.5583 19.571 78.859 51.421 96.118 0 9 19 75 53 93 0 1 1 2 2 1 0 10915 17904 1972 17232 41374;41375;41376 47925;47926;47927;47928 47927 4 SMAASGNLGHTPFLDEL Unmodified 1758.8247 0.82468476 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 6 0 1 76.118 76.118 2 0.023401 27687 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.209 17.828 0 20.216 0 30.466 7.3261 20.045 0 19 0 28 9 19 0 1 0 1 1 1 3492.5 17905 3117 17233 41377 47929 47929 1 SMAEDTVDAAVK Unmodified 1235.5704 0.57036755 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 4 0 1 54.79 54.79 2 2.464E-09 18571 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.214 68.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17906 2179 17234 41378 47930 47930 1 SMAGVVK Unmodified 690.37345 0.37344606 2922 Q9CQD4;Q99LU0 Chmp1b2;Chmp1b1 Charged multivesicular body protein 1b-2;Charged multivesicular body protein 1b-1 yes no 0 0 0 0 8 0 1 45.95 45.95 2 0.02534 12048 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.74 71.169 79.001 0 67.384 57.192 0 99.138 74 0 65 56 0 93 1 0 1 1 0 1 2837.7 17907 2922 17235 41379 47931 47931 1 SMAMAARK 2 Oxidation (M) 896.42081 0.42080696 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 2 1 8 0 1 52.216 52.216 2 0.021905 14921 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.358 11.225 0 38.443 55.304 66.926 43.73 38.194 0 37 56 65 46 37 0 1 1 1 1 1 4321.9 17908 2696 17236 41380 47932 47932 179;180 1 SMATVDEEEQAVLDR Unmodified 1691.7672 0.76722946 2645 Q8R1N4;A0A0A0MQL8 Nudcd3 NudC domain-containing protein 3 yes no 0 0 0 0 2 0.816 1 1 1 63.283 63.283 3 4.2298E-23 21132 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 141.85 118.49 29.952 18.196 20.558 90.719 9.414 20.254 28 19 19 83 9 19 1 1 1 2 1 1 9853.3 17909 2645 17237 41381;41382;41383 47933;47934;47935 47933 3 SMDKDFVAATIQAIGR Unmodified 1721.8771 0.87705468 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 1 9.5 0.5 1 1 77.051 77.051 3 0.00021355 25979 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.148 44.861 89.059 0 0 69.098 103.52 0 83 0 0 65 102 0 1 0 0 1 1 0 9206.9 17910 3249 17238 41384;41385 47936;47937 47936 2 SMEAEMIQLQEELAAAER Unmodified 2047.9554 0.95544093 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 4 0 1 88.561 88.561 3 3.9378E-16 33486 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.205 69.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17911 2696 17239 41386 47938 47938 1 SMGFIGHYLDQK Unmodified 1394.6653 0.66527099 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 9 0 1 65.505 65.505 3 6.3533E-06 20526 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.845 59.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17912 2020 17240 41387 47939 47939 1 SMHEFSAK Unmodified 935.4171 0.41710179 1251 O70325 Gpx4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial yes yes 0 0 0 0 6 0 1 40.052 40.052 3 0.015709 10709 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.981 33.982 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17913 1251 17241 41388 47940 47940 1 SMIDDTYQCLTAVAGTPR Unmodified 1997.9187 0.9186615 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 7.33 0.471 2 1 76.881 76.881 2;3 1.004E-29 26508 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.26 95.762 69.094 53.858 63.822 65.734 80.143 106.45 65 56 65 65 83 102 1 1 1 1 1 1 14109 17914 3355 17242 41389;41390;41391 47941;47942;47943 47943 3 SMPDAMPLPGVGEELK Acetyl (Protein N-term) 1711.8161 0.81609391 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 1 0 0 0 4 0 1 86.595 86.595 3 0.0012527 32927 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.695 36.723 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2063.2 17915 2298 17243 41392 47944 47944 1 SMPEQTGEK Unmodified 1005.4437 0.44371047 382 A0A2I3BQF4;P62889 Rpl30 60S ribosomal protein L30 yes no 0 0 0 0 4 0 1 38.463 38.463 2 0.052831 10842 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.258 31.626 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17916 382 17244 41393 47945 47945 1 SMQEHTTDNR Unmodified 1217.5095 0.50949863 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 3.5 0.5 1 1 20.659 20.659 3 0.0013524 3254 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.524 48.096 9.4788 19.35 13.549 8.7616 14.242 0 9 19 14 9 14 0 1 1 1 1 1 0 1391 17917 927 17245 41394;41395 47946;47947 47946 2 SMQNHAAVFR Unmodified 1159.5557 0.55566096 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 35.209 35.209 3 0.0050864 6959 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.699 49.111 0 39.368 0 50.278 0 0 0 37 0 46 0 0 0 1 0 1 0 0 4858.1 17918 2597 17246 41396;41397 47948;47949 47949 2 SMSHQAAIASQR Unmodified 1285.6197 0.61971778 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 7 0 1 28.599 28.599 3 0.0012426 4818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.67 44.469 14.979 8.566 0 5.1941 14.405 0 14 9 0 5 14 0 1 1 0 1 1 0 862.64 17919 2485 17247 41398 47950 47950 1 SMSTDGLMK Unmodified 968.4307 0.43070295 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 53.757 53.757 2 0.0005642 16346 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.52 76.798 59.623 92.76 57.182 75.988 79.012 125.67 56 93 56 74 83 120 1 3 1 2 2 2 13633 17920 3011 17248 41399;41400;41401 47951;47952;47953 47952 3 SMSTVLK Unmodified 764.41023 0.4102255 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 8 0 1 51.001 51.001 2 0.014243 14305 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.78 0 0 78.736 0 88.612 112.04 0 0 74 0 83 111 0 0 1 0 1 1 0 8537.8 17921 1096 17249 41402 47954 47954 1 SMSVYCTPNKPSR Unmodified 1525.7017 0.70173285 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 1 9 0 1 43.727 43.727 3 0.00015266 10319 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.734 80.615 0 19.674 32.437 22.596 32.434 0 0 19 32 23 32 0 0 1 1 1 1 0 2683.1 17922 1242 17250 41403 47955 47955 1 SMTEAEQQQLIDDHFLFDKPVSPLLLASGMAR Unmodified 3586.78 0.77998976 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 1 9 2.67 1 2 1 1 2 86.76 86.76 4;5 9.6481E-44 31277 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.62 102.53 224.26 190.02 219.62 389.55 372.86 336.93 213 188 223 371 377 325 7 5 7 9 9 8 127330 17923 1883 17251 41404;41405;41406;41407;41408;41409;41410 47956;47957;47958;47959;47960;47961;47962;47963;47964;47965;47966;47967;47968;47969 47964 14 SMTEQEQQQLIDDHFLFDKPVSPLLLASGMAR Unmodified 3643.8015 0.80145348 1320 P07310;A0A0J9YKD4 Ckm Creatine kinase M-type yes no 0 0 0 1 8 0.816 1 1 1 81.276 81.276 5 0.00044606 28829 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.439 30.63 60.088 0 78.368 38.156 47.137 137.23 56 0 74 37 46 130 1 0 2 1 1 3 42635 17924 1320 17252 41411;41412;41413 47970;47971;47972 47971 3 SMVLGYWDIR Unmodified 1238.6118 0.61177885 1584 P48774;E9PVM7;E9Q024;E9Q5L9 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 10.7 1.7 1 1 1 76.843 76.843 2 0.0012392 23495 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.867 60.445 257.75 85.183 69.98 100.63 130.08 165.19 241 92 65 93 130 157 3 2 1 1 2 2 57023 17925 1584 17253 41414;41415;41416 47973;47974;47975 47974 3 SMVQFIGR Unmodified 936.48512 0.48512178 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 10 0 1 58.479 58.479 2 0.048601 15306 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.207 24.446 88.692 72.756 0 101.65 0 69.29 83 74 0 93 0 65 1 1 0 1 0 1 9069.4 17926 2278 17254 41417 47976 47976 1 SNAEDTMR Unmodified 922.38144 0.38144457 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2 0 1 27.121 27.121 2 0.047503 5772 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 64.654 57.086 39.283 26.341 47.994 0 0 69.29 37 28 46 0 0 65 1 1 1 0 0 1 4879.3 17927 3266 17255 41418 47977 47977 1 SNAHYNLQNAFNLAEQHLGLTK Unmodified 2482.2353 0.23531968 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 0.816 1 1 1 72.22 72.22 4 8.9684E-12 23534 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.805 54.086 228.43 130.17 498.12 367.4 230.08 360.37 214 129 481 362 231 343 3 3 6 5 4 5 47616 17928 2148 17256 41419;41420;41421 47978;47979;47980;47981;47982;47983;47984 47983 7 SNAHYNLQNAFNLAEQHLGLTK Deamidation (N) 2483.2193 0.21933527 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 7 0 1 75.463 75.463 4 5.7284E-06 26418 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.588 46.305 59.736 0 59.084 27.083 0 49.036 56 0 56 28 0 46 1 0 1 1 0 1 1760.6 17929 2148 17256 41422 47985 47985 844 1 SNAQGIDLNR Unmodified 1086.5418 0.54178503 1868 Q00493 Cpe Carboxypeptidase E yes yes 0 0 0 0 5 0 1 39.628 39.628 2 2.0625E-07 10963 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.98 27.071 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17930 1868 17257 41423 47986 47986 1 SNAVEDR Unmodified 789.3617 0.3616954 220 A0A0R4J2B0;V9GX43;S4R2U7;S4R1S7;E9QA47;Q9Z0H4;S4R2L5;S4R2S7 Celf2 CUGBP Elav-like family member 2 yes no 0 0 0 0 1.5 0.5 1 1 23.278 23.278 2 0.0027562 3865 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 151.5 44.585 211.94 126.54 295.36 364.81 239.88 293.86 199 125 296 354 255 280 2 2 3 3 3 2 54703 17931 220 17258 41424;41425 47987;47988;47989 47987 3 SNDGNSYR Deamidation (N) 912.35734 0.35733831 2859 Q99LC3;A0A087WR38 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 1 0 0 1 0 1 23.405 23.405 2 0.0055211 3896 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 154.28 132.35 33.953 31.123 37.995 0 0 44.772 32 32 37 0 0 42 1 1 1 0 0 1 17302 17932 2859 17259 41426 47990 47990 1015 1 SNDGNSYR Unmodified 911.37332 0.37332272 2859 Q99LC3;A0A087WR38 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes no 0 0 0 0 5.5 4.39 1 1 1 1 21.451 21.451 2 0.022202 3486 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.943 48.93 74.497 18.316 119.94 43.321 84.938 83.922 70 19 114 44 85 81 2 1 4 3 3 3 37039 17933 2859 17259 41427;41428;41429;41430 47991;47992;47993;47994 47992 4 SNDIDLEGFDSVISSTEK Unmodified 1954.9007 0.90074605 2668 Q8R550;B0R0Y8 Sh3kbp1 SH3 domain-containing kinase-binding protein 1 yes no 0 0 0 0 4 0 1 79.786 79.786 3 0.04893 29935 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.152 10.313 0 9.2416 20.004 0 0 0 0 9 19 0 0 0 0 1 1 0 0 0 1329.6 17934 2668 17260 41431 47995 47995 1 SNDPVALAFAEMLK Unmodified 1504.7596 0.7595653 3232 Q9JKK7 Tmod2 Tropomodulin-2 yes yes 0 0 0 0 10.7 3.3 1 2 92.847 92.847 2;3 6.7914E-05 36917 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.296 18.411 39.2 45.538 45.631 27.18 83.931 66.71 37 46 46 28 83 65 1 1 1 1 2 2 10698 17935 3232 17261 41432;41433;41434 47996;47997;47998 47997 3 SNDSGIQQCSEDGR Unmodified 1551.622 0.6219622 409 D4AFX6;A0A338P6P6;Q6ZQK5 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 1 0 1 30.322 30.322 3 1.0487E-14 6928 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.566 83.624 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17936 409 17262 41435 47999 47999 1 SNEATTGR Unmodified 834.38316 0.38315913 13 Q3TYE5;A0A087WP80;Q8BLK3;F6SB80 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 5.5 4.39 1 1 1 1 18.054 18.054 2 0.0081694 2564 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.55 68.297 58.691 63.055 45.85 64.794 77.743 47.277 55 61 47 61 77 45 4 4 4 3 3 4 56273 17937 13 17263 41436;41437;41438;41439 48000;48001;48002;48003;48004;48005 48002 6 SNEILTAIIQGMR Unmodified 1444.7708 0.77079869 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 9.5 0.5 1 1 86.959 86.959 2;3 0.00045186 27929 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.85 54.124 0 29.792 0 40.441 0 20.254 0 28 0 37 0 19 0 1 0 1 0 1 11131 17938 1798 17264 41440;41441 48006;48007 48007 2 SNEKEQLQGLNDR Unmodified 1529.7434 0.74339797 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 7.33 4.03 1 1 1 42.096 42.096 3 2.3837E-21 12219 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 159.12 127 0 281.87 365.88 199.63 440.05 442.62 0 269 362 200 444 427 0 2 3 2 3 3 59170 17939 154 17265 41442;41443;41444 48008;48009;48010 48009 3 SNEPPPPYPGGPTAPLLEEK Acetyl (Protein N-term) 2131.0474 0.047350708 3116 Q9DB75 Cdip1 Cell death-inducing p53-target protein 1 yes yes 1 0 0 0 3 0 1 75.824 75.824 3 1.3213E-05 28707 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.729 19.41 0 19.892 19.365 0 29.288 0 0 19 19 0 28 0 0 1 1 0 1 0 11059 17940 3116 17266 41445 48011 48011 1 SNEPPPPYPGGPTAPLLEEK Acetyl (Protein N-term);Deamidation (N) 2132.0314 0.031366293 3116 Q9DB75 Cdip1 Cell death-inducing p53-target protein 1 yes yes 1 1 0 0 4 0 1 75.792 75.792 3 8.2864E-09 28149 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.023 52.23 29.812 0 39.062 18.439 0 29.848 28 0 37 19 0 28 1 0 1 1 0 1 15722 17941 3116 17266 41446 48012 48012 1081 1 SNEYQLIDCAQYFLDK Unmodified 2005.9091 0.90914267 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 9.5 3.5 1 1 86.336 86.336 3 1.0322E-05 32349 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.786 57.707 48.265 19.751 48.277 28.946 0 29.848 47 19 47 28 0 28 2 1 2 1 0 1 6982.9 17942 1772 17267 41447;41448 48013;48014;48015 48013 3 SNFAVGYR Unmodified 912.44537 0.44536545 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 8 0.816 1 1 1 45.678 45.678 2 0.00042527 11838 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.32 79.518 324.02 101.17 392.54 415.11 279.51 321.42 304 120 387 406 296 309 1 1 2 2 2 2 49759 17943 2096 17268 41449;41450;41451 48016;48017;48018 48017 3 SNFEEALAAHK Unmodified 1215.5884 0.58840088 1331 P09103;E9Q8G8 P4hb Protein disulfide-isomerase yes no 0 0 0 0 7 0 1 52.821 52.821 3 0.021588 15835 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.189 20.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17944 1331 17269 41452 48019 48019 1 SNFELLEK Unmodified 978.50221 0.50221163 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 6.5 0.5 1 1 64.092 64.092 2;3 0.015128 21890 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.17 16.607 38.928 55.573 152.07 101.89 28.096 127.92 37 56 148 102 28 120 1 1 2 2 1 1 9962.8 17945 3261 17270 41453;41454 48020;48021 48020 2 SNFGYNIPLK Unmodified 1151.5975 0.597509 1253 O70435;E0CX62 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 0 9 0 1 66.192 66.192 3 0.0059116 20811 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.019 22.941 0 0 0 119.3 107.33 96.075 0 0 0 111 111 93 0 0 0 1 1 1 16510 17946 1253 17271 41455 48022 48022 1 SNFKPSLLAQK Unmodified 1231.6925 0.69247202 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 1 11 0.816 2 2 2 56.304 56.304 3;4 3.0305E-08 12710 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.95 81.393 1073.2 905.71 489.5 1076.7 500.29 645.56 1006 919 473 999 496 616 4 6 3 5 4 4 305930 17947 1836 17272 41456;41457;41458;41459;41460;41461 48023;48024;48025;48026;48027;48028;48029;48030 48028 8 SNFLVLCYLHDVK Unmodified 1606.8177 0.81774888 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 10 0.816 1 1 1 76.704 76.704 3 0.00011211 25760 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.764 53.891 105.02 68.588 34.238 37.736 137.9 106.11 101 65 37 37 139 102 2 1 1 1 3 2 21485 17948 3259 17273 41462;41463;41464 48031;48032;48033;48034 48031 4 SNFSILQLHEFK Unmodified 1461.7616 0.76161421 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 9 0 1 68.542 68.542 3 0.027417 21954 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.316 23.307 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17949 2554 17274 41465 48035 48035 1 SNFSLAILNVGAPAAGMNAAVR Unmodified 2143.1208 0.1208072 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 10.5 0.5 1 1 83.165 83.165 3 2.6741E-15 26004 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.625 69.136 44.834 66.137 0 89.543 62.539 38.966 42 65 0 83 65 37 1 2 0 2 2 1 27932 17950 1357 17275 41466;41467 48036;48037 48037 2 SNGYEEAYSVFK Deamidation (N) 1393.6038 0.60377617 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 1 0 0 5.33 0.471 2 1 69.961 69.961 2;3 0.00086209 25332 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.716 48.465 38.825 74.714 103.23 55.055 0 0 37 74 102 56 0 0 1 1 2 2 0 0 6841.4 17951 1760 17276 41468;41469;41470 48038;48039;48040 48038 690 3 SNGYEEAYSVFK Unmodified 1392.6198 0.61976058 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 0 6 0 1 64.815 64.815 3 0.0092981 22256 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.14 33.883 0 50.008 0 29.902 37.328 0 0 47 0 28 37 0 0 1 0 1 1 0 2321.5 17952 1760 17276 41471 48041 48041 1 SNHEEEVADLLAQIQASHITVER Unmodified 2588.2831 0.28305774 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 5 0.632 1 3 1 72.947 72.947 3;4 2.9788E-15 26806 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.701 72.275 70.24 124.15 103.21 146.64 87.289 166.72 66 121 102 139 88 158 3 4 3 4 3 5 29163 17953 154 17277 41472;41473;41474;41475;41476 48042;48043;48044;48045;48046;48047;48048;48049 48045 8 SNHEQEVNTLR Unmodified 1325.6324 0.63239096 664 CON__Q9UE12;CON__Q15323 yes no 0 0 0 0 3 1 1 1 28.368 28.368 3 0.00050698 6363 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 78.864 57.994 0 24.472 0 20.357 21.79 38.82 0 23 0 19 23 37 0 1 0 1 1 1 3490.6 + 17954 664 17278 41477;41478 48050;48051 48050 2 SNITSLS Unmodified 720.36538 0.3653838 836;207 Q3TT92;E9PWE8;Q62188;Q3TMU8;A0A0R4J1N0;O35098 Dpysl3;Dpysl4 Dihydropyrimidinase-related protein 3;Dihydropyrimidinase-related protein 4 no no 0 0 0 0 6 0 1 50.863 50.863 2 0.04575 15804 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.674 55.746 29.904 27.776 0 29.375 65.35 37.577 28 28 0 28 65 37 1 1 0 1 1 1 11936 17955 836;207 17279 41479 48052 48052 1 SNIWLAAVTK Unmodified 1101.6182 0.61824444 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 11.5 0.5 1 1 72.977 72.977 2;3 7.9445E-05 21326 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 96.64 61.753 211.26 229.47 233.66 294.88 27.237 260.39 199 232 235 283 28 245 3 3 2 4 1 3 52825 17956 1836 17280 41480;41481 48053;48054;48055;48056 48053 4 SNLAYDIVQLPTGLTGIK Unmodified 1902.0462 0.046228496 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 10 1.93 1 4 2 88.052 88.052 2;3;4 1.0116E-06 31056 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.676 64.79 138.89 148.56 36.61 238.4 109.83 195.13 130 149 37 222 111 185 3 4 1 5 2 4 59354 17957 1957 17281 41482;41483;41484;41485;41486;41487;41488 48057;48058;48059;48060;48061;48062;48063 48059 7 SNLGSVVLQLK Unmodified 1156.6816 0.68157298 1185 O35286;A0A0G2JG10;Q497W9 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 10 1 1 1 71.873 71.873 3 0.0050632 23640 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.261 31.007 0 0 0 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 3353.4 17958 1185 17282 41489;41490 48064;48065 48064 2 SNLLALVGGGSSPK Unmodified 1298.7194 0.71941505 49 A0A140LJG8;F7CAT9;A0A140LJC8;A0A140LJJ0;A0A140LIN0;A0A140LJ78;A2AEV2;A0A140LJ16;F6YHS5;F6Q8K5;A0A140LHQ5;A0A140LHM4;A0A140LHZ1;A0A140LJ74;A0A0A0MQH0;F6QP00;A0A140LI37;S4R186;Q91VM3 Wdr45 WD repeat domain phosphoinositide-interacting protein 4 yes no 0 0 0 0 11 0 1 72.24 72.24 3 0.0010791 21086 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.862 37.329 0 0 0 0 102 0 0 0 0 0 102 0 0 0 0 0 1 0 10527 17959 49 17283 41491 48066 48066 1 SNLVISDPIPGAKPLPVPPELAPFVGR Unmodified 2779.5636 0.56363668 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 1 10 2.16 1 1 1 89.324 89.324 4 1.803E-11 32454 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.029 56.934 35.049 29.792 60.549 85.177 44.657 47.762 33 28 58 82 46 46 2 1 2 3 1 1 18130 17960 607 17284 41492;41493;41494 48067;48068;48069 48067 3 SNNVEMDWVLK Unmodified 1333.6336 0.63363651 1209 O35737;Q8C2Q7 Hnrnph1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed yes no 0 0 0 0 6 0 1 72.09 72.09 3 0.016228 25758 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.481 22.876 29.622 26.992 48.003 0 27.631 48.248 28 28 46 0 28 46 1 1 1 0 1 1 3723.5 17961 1209 17285 41495 48070 48070 1 SNNVNEFPVLK Unmodified 1259.651 0.65100113 3186 Q9ERK4;E9Q1T9;F6ZEW4 Cse1l Exportin-2 yes no 0 0 0 0 6 0 1 62.065 62.065 3 0.0097686 21081 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.207 24.089 0 28.835 57.242 36.371 35.015 58.697 0 28 56 37 37 56 0 1 1 1 1 1 2825.6 17962 3186 17286 41496 48071 48071 1 SNPETDDYR Unmodified 1095.4469 0.4468816 2448 Q8BRF7;A0A1W2P6R7 Scfd1 Sec1 family domain-containing protein 1 yes no 0 0 0 0 1 0 1 31.156 31.156 2 0.019012 7382 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.933 37.534 0 39.085 16.917 29.089 26.953 29.079 0 37 19 28 28 28 0 1 1 1 1 1 14083 17963 2448 17287 41497 48072 48072 1 SNPGDFTLSVR Unmodified 1191.5884 0.58840088 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 7 0 1 56.823 56.823 2 0.027715 17674 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.6 22.228 59.958 25.749 0 70.238 42.881 58.472 56 28 0 65 46 56 1 1 0 1 1 1 2606.6 17964 1512 17288 41498 48073 48073 1 SNPTLNEYHTR Unmodified 1330.6266 0.6265773 1870 Q00623 Apoa1 Apolipoprotein A-I;Proapolipoprotein A-I;Truncated apolipoprotein A-I yes yes 0 0 0 0 4.5 0.5 1 1 33.326 33.326 3 2.7971E-08 7887 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.38 74.059 19.017 0 49.885 19.597 0 0 18 0 47 19 0 0 2 0 2 1 0 0 6980.4 17965 1870 17289 41499;41500 48074;48075 48075 2 SNPVHEIQSLDEVTNLDR Unmodified 2065.0076 0.0076111585 3046 Q9D1Q6 Erp44 Endoplasmic reticulum resident protein 44 yes yes 0 0 0 0 4 0 1 64.792 64.792 3 9.3462E-08 23033 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.1 87.663 0 29.792 0 30.079 27.906 0 0 28 0 28 28 0 0 1 0 1 1 0 4934.6 17966 3046 17290 41501 48076 48076 1 SNSLAFIK Unmodified 878.48617 0.48616764 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 60.188 60.188 2 0.051385 17912 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.076 11.503 88.377 0 114.56 114.5 0 118.33 83 0 111 111 0 111 1 0 1 1 0 1 11127 17967 3204 17291 41502 48077 48077 1 SNSPENTR Unmodified 903.40462 0.40462285 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 1.5 0.5 1 1 18.289 18.289 2 0.0040863 2782 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.86 61.67 34.199 0 22.945 16.872 33.321 42.755 32 0 22 17 34 41 2 0 1 1 2 2 9703.1 17968 107 17292 41503;41504 48078;48079 48078 2 SNTPIKVDGK Unmodified 1057.5768 0.57677356 1316 P06745 Gpi Glucose-6-phosphate isomerase yes yes 0 0 0 1 8.5 2.69 1 1 1 1 42.695 42.695 3 0.0029761 12491 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.124 50.61 1536.7 589.05 1270 1354.9 1306.2 1604.4 1442 617 1253 1330 1338 1540 4 2 3 4 4 5 124210 17969 1316 17293 41505;41506;41507;41508 48080;48081;48082;48083;48084 48084 5 SNVASTAACSSASSLGLGLAYR Unmodified 2142.0375 0.037531078 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 8.33 3.64 1 1 1 1 1 1 65.439 65.439 3 2.704E-54 16021 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 154.84 139.33 88.058 86.136 142.66 74.932 79.192 69.29 83 84 139 74 79 65 2 2 3 1 2 2 51529 17970 1557 17294 41509;41510;41511;41512;41513;41514 48085;48086;48087;48088;48089;48090 48090 6 SNVDFVK Unmodified 807.41267 0.41266834 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 6.5 0.5 1 1 51.094 51.094 2 0.014458 15944 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.5 43.155 294.96 260.66 338.76 342.2 142.3 134.52 278 269 343 334 148 130 2 2 2 2 1 1 28372 17971 2585 17295 41515;41516 48091;48092 48091 2 SNVNDGVAQSTR Unmodified 1246.5902 0.59019179 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 5.25 3.63 2 2 4 1 1 2 30.261 30.261 2;3 2.6375E-140 7081 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 254.07 201.21 428.88 419.99 554.07 442.47 602.4 594.53 404 429 543 429 604 576 6 9 7 10 9 11 378400 17972 1405 17296 41517;41518;41519;41520;41521;41522;41523;41524;41525;41526;41527;41528 48093;48094;48095;48096;48097;48098;48099;48100;48101;48102;48103;48104;48105;48106;48107 48102 15 SNVNDGVAQSTR Deamidation (N) 1247.5742 0.57420737 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 1 0 0 4.33 3.9 2 3 1 33.362 33.362 2;3 1.555E-25 8747 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 175.54 133.96 198.06 184.6 99.072 175.89 279.06 133.96 186 186 103 168 278 130 5 4 3 4 5 3 54846 17973 1405 17296 41529;41530;41531;41532;41533;41534 48108;48109;48110;48111;48112;48113;48114 48112 506;507 7 SNVTAVHK Unmodified 854.46102 0.46101552 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 9 2.38 1 1 1 1 1 1 33.104 33.104 3 0.0018829 6133 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.815 48.849 429.32 848.58 1125.4 913.82 787.06 1154.7 405 838 1124 907 800 1103 5 6 7 6 4 6 174140 17974 307 17297 41535;41536;41537;41538;41539;41540 48115;48116;48117;48118;48119;48120;48121;48122 48119 8 SNYNFEKPFLWLAR Unmodified 1783.9046 0.90459006 1744 P62827 Ran GTP-binding nuclear protein Ran yes yes 0 0 0 1 10 0 1 78.796 78.796 3 1.2672E-28 24419 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 153.14 124.36 434.79 380.32 0 310.04 440.34 469.27 407 385 0 289 450 452 2 2 0 1 2 2 54073 17975 1744 17298 41541 48123;48124 48123 2 SPAASAPSLPPAAAVLPSK Unmodified 1730.9567 0.95668521 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 8 0 1 68.152 68.152 4 3.7136E-05 22432 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.864 35.483 29.904 76.262 27.387 0 103.76 85.517 28 74 28 0 102 83 1 2 1 0 2 2 3371.7 17976 2886 17299 41542 48125;48126 48126 2 SPAASQAPVSR Unmodified 1069.5516 0.55162144 598 B1AWC8;Q8VBU5;B1AWC9;G3UZ46;Q80VK8 Pde4b yes no 0 0 0 0 5 0 1 31.222 31.222 2 0.0073548 6948 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.56 36.784 20.387 0 0 9.837 0 29.848 19 0 0 9 0 28 1 0 0 1 0 1 1545.9 17977 598 17300 41543 48127 48127 1 SPADPSR Unmodified 728.34532 0.34531706 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 6.25 3.96 1 1 1 1 24.025 24.025 2 0.010715 4530 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.52 43.338 434.37 303.71 496.6 463.59 461.65 662.67 409 310 489 449 481 634 4 2 3 4 4 5 490440 17978 1399 17301 41544;41545;41546;41547 48128;48129;48130;48131;48132 48128 5 SPAITATLEGK Unmodified 1086.5921 0.59208927 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 7 0 1 58.559 58.559 2 0.014509 18609 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.699 30.957 0 48.944 0 0 0 29.848 0 46 0 0 0 28 0 1 0 0 0 1 2652.6 17979 1929 17302 41548 48133 48133 1 SPALAFSLAATAQAAPR Unmodified 1641.8839 0.88385462 3284 Q9QYS9 Qki Protein quaking yes yes 0 0 0 0 11 0 1 72.708 72.708 2 0.0025768 21306 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.966 30.637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17980 3284 17303 41549 48134 48134 1 SPAPPLLHVAALGQK Unmodified 1497.8667 0.86674799 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 10 0 1 62.528 62.528 3 0.00032016 17160 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.895 44.942 69.101 63.591 54.385 45.867 62.21 106.96 65 65 56 46 65 102 1 1 1 1 1 1 6427.2 17981 2701 17304 41550 48135 48135 1 SPAPSSDFADAITELEDAFSR Unmodified 2225.0124 0.012421765 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 7 3.54 1 1 1 1 103.03 103.03 3 9.0219E-50 36161 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.08 125.97 11.756 29.984 6.1786 8.3758 3.138 4.264 11 30 6 8 3 4 3 2 1 2 1 1 7141.1 17982 281 17305 41551;41552;41553;41554 48136;48137;48138;48139 48137 4 SPAQPAGTGK Unmodified 912.46649 0.46649483 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6 0 1 33.864 33.864 2 0.004144 7731 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.939 57.432 20.195 38.006 0 0 28.62 19.437 19 37 0 0 28 19 1 1 0 0 1 1 2043.6 17983 3285 17306 41555 48140 48140 1 SPAQQPGTAK Unmodified 983.50361 0.50360861 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6 0 1 33.05 33.05 2 0.011704 7390 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.04 27.02 20.387 0 0 20.614 8.1456 9.3616 19 0 0 19 9 9 1 0 0 1 1 1 1922.6 17984 3285 17307 41556 48141 48141 1 SPASDTYIVFGEAK Unmodified 1483.7195 0.71947463 1818 Q60817;P70670 Naca Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form yes no 0 0 0 0 8.33 3.3 2 1 67.716 67.716 2;3 0.00019289 23643 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.539 58.421 68.777 81.262 144.32 19.198 28.406 99.138 65 83 139 19 28 93 1 2 2 1 1 1 16368 17985 1818 17308 41557;41558;41559 48142;48143;48144 48143 3 SPATTLPK Unmodified 813.45962 0.45961853 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 7.5 0.5 1 1 45.365 45.365 2 0.0072138 12403 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 106.04 16.492 78.495 152 74.127 0 172.69 58.081 74 149 74 0 167 56 1 2 1 0 2 1 15972 17986 1464;860 17309 41560;41561 48145;48146 48145 2 SPAVASGHRPGAGGR Unmodified 1375.7069 0.7068933 955 Q9JKS5;E9QKB2;A0A1Y7VNT1 Habp4 Intracellular hyaluronan-binding protein 4 yes no 0 0 0 1 7 0 1 23.708 23.708 4 0.036204 3454 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.028 22.137 23.311 24.548 28.706 0 32.426 0 22 25 28 0 31 0 1 1 1 0 1 0 1280.6 17987 955 17310 41562 48147 48147 1 SPCDSGYSYETIEK Unmodified 1634.677 0.67701747 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6.67 4.5 1 1 1 54.767 54.767 2;3 0.00012017 18421 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.507 75.844 267.04 120.79 47.973 157.98 229.53 171.47 251 130 46 148 232 167 3 2 1 1 2 2 16765 17988 1382 17311 41563;41564;41565 48148;48149;48150 48150 3 SPDAAGATIL Unmodified 914.47091 0.4709115 2831 Q99JP7 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes yes 0 0 0 0 4 0 1 63.133 63.133 2 0.016341 22374 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.682 35.232 0 0 33.816 18.138 32.639 0 0 0 32 19 32 0 0 0 1 1 1 0 4253.7 17989 2831 17312 41566 48151 48151 1 SPDCTHDNPLETR Unmodified 1540.6576 0.65761943 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 3 0.816 1 1 1 38.262 38.262 3 5.6962E-50 11060 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 199.13 166.88 823 576.21 889.16 379.74 754.73 942.13 773 604 875 374 760 904 5 5 5 5 4 6 530780 17990 106 17313 41567;41568;41569 48152;48153;48154;48155;48156;48157;48158 48152 7 SPDDPSR Unmodified 772.33515 0.3351463 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 1.75 0.829 2 1 1 22.913 22.913 2 0.0015472 3941 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.51 75.571 12147 9959.2 13117 11450 14125 13570 11440 10336 13203 11433 14452 13107 9 9 9 8 9 8 1933700 17991 1398 17314 41570;41571;41572;41573 48159;48160;48161;48162;48163;48164;48165;48166;48167 48161 9 SPDFTNENPLETR Unmodified 1518.6951 0.69505079 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7.33 4.11 1 1 1 1 2 58.195 58.195 2;3 7.5151E-21 19968 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 156.73 122.84 99.024 200.74 165.3 169.33 214.67 197.23 93 196 158 167 213 186 2 5 3 4 4 4 88423 17992 2699 17315 41574;41575;41576;41577;41578;41579 48168;48169;48170;48171;48172;48173;48174 48171 7 SPDFTNENPLETR Deamidation (N) 1519.6791 0.67906638 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 1 0 0 3 0 1 59.001 59.001 3 0.00030015 20810 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.83 49.619 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17993 2699 17315 41580 48175 48175 973 1 SPDSTANVR Unmodified 945.45157 0.45157304 5 A0A087WNM1;Q91Z67;A0A087WSQ1 Srgap2 SLIT-ROBO Rho GTPase-activating protein 2 yes no 0 0 0 0 4 0 1 28.052 28.052 2 0.0018815 5987 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.498 34.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17994 5 17316 41581 48176 48176 1 SPDTGLDLPQLLYHVENK Unmodified 2038.0371 0.037120373 1587 P49442 Inpp1 Inositol polyphosphate 1-phosphatase yes yes 0 0 0 0 6.5 0.5 1 1 80.218 80.218 3 1.7012E-21 29511 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.021 71.373 50.239 38.006 0 50.863 27.029 68.519 47 37 0 47 28 65 2 1 0 2 1 2 4289.1 17995 1587 17317 41582;41583 48177;48178;48179 48177 3 SPDTNYLFMGDYVDR Unmodified 1791.7774 0.77740021 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 9.5 3.5 1 1 74.008 74.008 2 4.2612E-05 27943 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.795 60.985 50.288 28.427 0 69.693 71.893 67.238 47 28 0 65 74 65 2 1 0 2 2 2 11633 17996 1731;1787 17318 41584;41585 48180;48181 48181 2 SPDTSAYCYETMEK Unmodified 1680.6647 0.66473822 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4.5 0.5 1 1 55.563 55.563 3 6.3923E-05 18937 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.769 61.632 40.394 18.055 48.588 0 46.807 67.954 38 19 46 0 46 65 2 1 1 0 1 2 5915.6 17997 1382 17319 41586;41587 48182;48183 48182 2 SPEAQTPVQEEAK Unmodified 1412.6783 0.6783381 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 3 0 1 42.478 42.478 2 0.023804 13229 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.354 25.972 9.612 8.9279 0 20.767 0 20.254 9 9 0 19 0 19 1 1 0 1 0 1 3005.6 17998 1415 17320 41588 48184 48184 1 SPEDLEK Unmodified 816.38651 0.38651317 1316 P06745;A0A0U1RP97;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 6.25 3.96 1 1 1 1 45.221 45.221 2;3 0.014333 13647 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.095 35.129 1068.8 704.44 1009.8 769.79 1083.4 864.8 1005 739 1009 778 1098 838 3 2 3 3 3 2 189760 17999 1316 17321 41589;41590;41591;41592 48185;48186;48187;48188 48188 4 SPEEGAETPVYLALLPPDAEGPHGQFVQDK Unmodified 3190.5459 0.54587394 1582 P48758;A0A1B0GRG8 Cbr1 Carbonyl reductase [NADPH] 1 yes no 0 0 0 0 4.5 0.5 1 1 78.182 78.182 4 1.2368E-31 29153 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.615 75.345 39.701 49.215 47.439 37.614 29.288 78.884 37 47 47 37 28 74 1 2 1 1 1 2 20714 18000 1582 17322 41593;41594 48189;48190;48191 48190 3 SPEFTHENPLETR Unmodified 1555.7267 0.72668527 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 4 0.816 1 1 1 48.271 48.271 3 5.9996E-19 15419 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 145.41 121.7 248 160.58 134.12 140.16 441.31 363.71 232 158 139 139 440 353 2 2 2 2 3 3 100750 18001 2253 17323 41595;41596;41597 48192;48193;48194 48193 3 SPELPGVQEDEAAS Unmodified 1427.6416 0.64161824 2679 Q8VBY2;B1AUD3 Camkk1 Calcium/calmodulin-dependent protein kinase kinase 1 yes no 0 0 0 0 2.5 0.5 1 1 59.901 59.901 2 0.0016335 21231 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.069 52.803 20.346 8.2041 20.558 0 9.0934 9.3345 19 9 19 0 9 9 1 1 1 0 1 1 6739.8 18002 2679 17324 41598;41599 48195;48196 48196 2 SPELQEEFGYNAETQK Unmodified 1868.8428 0.84283724 260 A0A1B0GS63;Q8K221;D3Z2F3 Arfip2 Arfaptin-2 yes no 0 0 0 0 4.5 0.5 1 1 61.39 61.39 3 0.0021823 21617 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.314 36.338 0 39.368 40.034 20.246 27.69 79.16 0 37 37 19 28 75 0 1 1 1 1 2 7056.9 18003 260 17325 41600;41601 48197;48198 48197 2 SPEPLEEELPQQR Unmodified 1550.7577 0.75765105 1217 O35972;A0A1B0GQZ1;A0A1B0GSZ9 Mrpl23 39S ribosomal protein L23, mitochondrial yes no 0 0 0 0 3 0 1 54.043 54.043 3 0.0022549 18500 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 53.947 36.922 0 0 19.284 28.599 45.492 38.144 0 0 19 28 46 37 0 0 1 1 1 1 2074 18004 1217 17326 41602 48199 48199 1 SPEQEVR Unmodified 843.40865 0.4086456 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 5.33 5.44 1 1 1 28.438 28.438 2 0.0036031 5828 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.5 67.552 429.68 323.64 547.15 446.1 466.42 776.6 405 340 544 446 491 741 2 2 2 2 2 2 88561 18005 510 17327 41603;41604;41605 48200;48201;48202 48202 3 SPEQPGTKPPLPR Unmodified 1402.7569 0.75686319 896 E9Q3M9;F7B0R9 2010300C02Rik yes no 0 0 0 1 6.5 0.5 1 1 42.798 42.798 3 0.00049134 11129 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.176 48.847 99.552 46.934 0 61.208 0 0 93 46 0 56 0 0 2 1 0 1 0 0 5357.3 18006 896 17328 41606;41607 48203;48204 48204 2 SPEYLSLFIDDK Unmodified 1425.7028 0.70276193 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 7.5 0.5 1 1 83.092 83.092 3 0.00047219 30195 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.498 28.26 40.631 28.427 0 0 57.249 38.644 38 28 0 0 56 37 2 1 0 0 2 1 4372.3 18007 3245 17329 41608;41609 48205;48206 48205 2 SPFLQVFNNSPDESSYYR Unmodified 2148.9752 0.9752484 880;3069 Q9D662;E9Q1S3;Q01405 Sec23b;Sec23a Protein transport protein Sec23B;Protein transport protein Sec23A no no 0 0 0 0 8.5 0.5 1 1 77.584 77.584 3 0.0001177 26167 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.768 48.188 0 0 0 70.554 26.124 78.139 0 0 0 65 28 74 0 0 0 2 1 2 7804.7 18008 3069;880 17330 41610;41611 48207;48208 48208 2 SPFYVSFLAGCVAGSAAAVAVNPCDVVK Unmodified 2855.3986 0.39862154 3075 Q9D6M3 Slc25a22 Mitochondrial glutamate carrier 1 yes yes 0 0 0 0 9.2 4.17 1 1 1 2 97.325 97.325 3;4 1.5467E-05 31789 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.626 34.611 14 3.192 29.602 31.142 28.439 45.426 14 3 28 30 29 43 1 1 2 3 3 2 19864 18009 3075 17331 41612;41613;41614;41615;41616 48209;48210;48211;48212;48213;48214;48215 48211 7 SPGAFDMSGVGGSLAESVGSPPPAATPTPTPPTR Unmodified 3192.5397 0.53974271 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 6 0 1 74.856 74.856 4 0.043836 27090 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 20.464 12.163 0 9.0847 29.391 8.0853 0 0 0 9 28 9 0 0 0 1 1 1 0 0 1870.6 18010 2324 17332 41617 48216 48216 1 SPGDPAR Unmodified 698.33475 0.33475237 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 3 0 1 23.709 23.709 2 0.027087 4578 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.777 10.837 200.73 150.9 219.68 283.32 279.33 228.68 189 158 224 276 287 222 1 1 1 1 1 1 82531 18011 2291 17333 41618 48217 48217 1 SPGLPIR Unmodified 738.43882 0.43882351 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 0 7 0 1 46.014 46.014 2 0.048867 12683 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.847 28.673 0 69.16 0 48.864 75.159 0 0 65 0 46 74 0 0 1 0 1 1 0 9710.8 18012 2167 17334 41619 48218 48218 1 SPGQDPIPIVLR Unmodified 1290.7296 0.7295858 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 6 0 1 66.285 66.285 2 3.5903E-05 22988 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.452 58.701 69.468 54.9 0 48.864 75.159 0 65 56 0 46 74 0 1 1 0 1 1 0 5652.6 18013 2047 17335 41620 48219 48219 1 SPGSQGVR Unmodified 786.39842 0.39841526 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 5.5 0.5 1 1 23.452 23.452 2 0.00542 3781 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 113.41 58.647 97.676 47.837 134.25 68.409 128.2 134.92 92 51 130 69 130 130 2 1 2 1 2 2 29080 18014 2914 17336 41621;41622 48220;48221 48220 2 SPGTPAGEGSGSPPK Unmodified 1324.6259 0.62590859 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6V4G5 Add1 Alpha-adducin yes no 0 0 0 0 8 3.56 1 1 1 37.42 37.42 3 7.0365E-06 9960 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.652 54.86 125.4 9.576 58.157 46.812 47.137 28.503 121 9 56 46 46 28 2 1 1 1 1 1 24207 18015 3276 17337 41623;41624;41625 48222;48223;48224 48222 3 SPGVLFLQFGEETR Unmodified 1578.8042 0.80420731 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 8 0 1 80.558 80.558 3 7.1816E-05 28295 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.834 53.738 79.228 0 29.2 78.478 35.31 39.5 74 0 28 74 37 38 2 0 1 2 1 2 3849.8 18016 573 17338 41626 48225;48226 48225 2 SPHPDVGK Unmodified 835.41882 0.41881635 488;489 A2ALS5;A2ALS7 Rap1gap Rap1 GTPase-activating protein 1 no no 0 0 0 0 5.5 0.5 1 1 32.466 32.466 3 0.012893 7446 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.8 36.243 128.62 77.327 138.32 152.37 119.3 144.77 121 83 139 149 121 139 2 2 2 2 1 2 40176 18017 488;489 17339 41627;41628 48227;48228 48227 2 SPIAEAVFR Unmodified 988.53418 0.53418046 2036;3055 Q561M1;Q9D358;A0A1W2P7X3 Acp1 Low molecular weight phosphotyrosine protein phosphatase no no 0 0 0 0 7 0 1 60.827 60.827 2 0.0063759 19654 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.455 55.604 108.94 101.18 0 148.48 183.13 103.51 102 102 0 139 185 102 1 1 0 1 1 1 18028 18018 2036;3055 17340 41629 48229 48229 1 SPIIFSK Unmodified 790.45889 0.45889025 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 10 0 1 61.488 61.488 2 0.053041 16709 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.738 26.148 253.2 245.42 337.35 253.36 395.26 0 239 252 337 257 389 0 1 1 1 1 1 0 27098 18019 165 17341 41630 48230 48230 1 SPILSGPK Unmodified 797.4647 0.46470391 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 8 0 1 50.821 50.821 2 0.053022 14270 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.436 17.436 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18020 2343 17342 41631 48231 48231 1 SPILVATAVAAR Unmodified 1167.6976 0.69755739 2146 Q62167;P16381 Ddx3x;D1Pas1 ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10 yes no 0 0 0 0 11.5 0.5 1 1 63.548 63.548 2 3.0983E-05 17046 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.734 54.222 0 177.69 0 167.23 0 49.036 0 167 0 153 0 46 0 2 0 2 0 1 30580 18021 2146 17343 41632;41633 48232;48233 48232 2 SPLAQMEEER Unmodified 1188.5445 0.54448715 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 4.5 0.5 1 1 50.614 50.614 2 0.0047217 16645 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.066 44.064 69.468 54.9 0 0 75.098 67.147 65 56 0 0 74 65 1 1 0 0 1 1 7628.1 18022 879 17344 41634;41635 48234;48235 48234 2 SPLAQMEEERR Unmodified 1344.6456 0.64559818 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 5 1 1 1 43.071 43.071 3 0.0013784 12983 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.74 58.641 68.858 92.57 104.02 63.071 150.3 77.288 65 93 102 65 149 74 1 2 1 1 2 1 15744 18023 879 17345 41636;41637 48236;48237 48236 2 SPLIIFADCDLNK Unmodified 1504.7596 0.7595653 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 8.5 0.5 1 1 82.183 82.183 3 0.00010446 28319 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.563 56.823 0 96.139 104.6 0 124.58 57.813 0 92 102 0 121 56 0 2 2 0 2 1 14272 18024 2633 17346 41638;41639 48238;48239 48239 2 SPLLTFPSKEPLR Unmodified 1483.8399 0.83986454 240 A0A140T8I9;E9Q3L2;A0A338P7D3 Pi4ka yes no 0 0 0 1 10 0 1 65.087 65.087 3 0.0067168 18197 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.804 31.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18025 240 17347 41640 48240 48240 1 SPLMPAKPR Unmodified 995.55862 0.55862107 3051 Q9D2P8 Mobp Myelin-associated oligodendrocyte basic protein yes yes 0 0 0 1 11 0.816 1 1 1 44.706 44.706 3 0.00079814 9724 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.8 62.817 195.05 310.32 317.42 265.11 360.58 646.21 185 309 317 259 365 613 2 2 2 2 2 2 66489 18026 3051 17348 41641;41642;41643 48241;48242;48243 48241 3 SPLPSHAR Unmodified 863.46135 0.46134987 991 F6RT34;F7A0B0;F6TYB7 Mbp yes no 0 0 0 0 8.75 1.92 1 1 1 1 27.21 27.21 2;3 0.015618 3954 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.59 38.112 21.158 47.066 27.017 86.083 44.631 55.892 20 46 28 81 45 53 2 3 2 4 2 2 11250 18027 991 17349 41644;41645;41646;41647 48244;48245;48246;48247 48246 4 SPLTICFPEYPGSNTYEDAAAYIQTQFESK Unmodified 3426.5602 0.56020338 1411 P18872;F6WC15 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 97.902 97.902 4 1.7354E-18 35007 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.085 59.774 81.13 69.403 48.606 107.43 82.567 96.782 76 68 49 101 84 93 5 3 4 5 2 4 80074 18028 1411 17350 41648;41649;41650;41651;41652 48248;48249;48250;48251;48252;48253;48254;48255 48253 8 SPLTICYPEYAGSNTYEEAAAYIQCQFEDLNK Unmodified 3744.66 0.65999378 622 B2RSH2 Gnai1 Guanine nucleotide-binding protein G(i) subunit alpha-1 yes yes 0 0 0 0 8.67 3.09 1 1 1 100.69 100.69 4;5 0.00011527 37293 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.483 31.336 6.3638 7.9875 45 6.2181 19.874 0 6 8 43 6 19 0 1 1 3 1 1 0 5708.6 18029 622 17351 41653;41654;41655 48256;48257;48258 48256 3 SPLTQEQLIPNLAMK Deamidation (N) 1682.8913 0.89130776 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 1 0 0 8 0 1 77.678 77.678 3 0.0036215 26999 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.403 34.571 0 0 58.057 56.917 44.19 38.181 0 0 56 56 46 37 0 0 1 1 1 1 2263.5 18030 3332 17352 41656 48259 48259 1130 1 SPLVMDVLNIQGVQR Unmodified 1667.9029 0.9028755 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 9 0 1 81.615 81.615 3 3.3501E-05 28071 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.175 50.625 0 0 0 30.604 0 49.036 0 0 0 28 0 46 0 0 0 1 0 1 6195.3 18031 3204 17353 41657 48260 48260 1 SPMPGAAYPR Unmodified 1045.5015 0.50150012 2128 Q61466;A0A2R8VKP3 Smarcd1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 yes no 0 0 0 0 1 0 1 18.514 18.514 3 0.023097 2815 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.368 7.347 5.365 0 0 0 7.322 0 5 0 0 0 7 0 1 0 0 0 1 0 797.47 18032 2128 17354 41658 48261 48261 1 SPNEEYVEVGR Unmodified 1277.5888 0.58879481 745 D3Z0V6;P12849 Prkar1b cAMP-dependent protein kinase type I-beta regulatory subunit yes no 0 0 0 0 2.5 0.5 1 1 44.945 44.945 2 0.0014887 13886 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.243 68.423 59.208 63.595 94.057 55.099 26.762 38.678 56 65 93 56 28 37 2 2 2 2 1 1 8445.5 18033 745 17355 41659;41660 48262;48263 48262 2 SPNELVDDLFK Unmodified 1275.6347 0.63468237 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 9.5 3.5 1 1 81.505 81.505 2;3 0.0045929 30107 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.261 30.47 20.215 0 28.93 28.366 27.316 19.475 19 0 28 28 28 19 1 0 1 1 1 1 4103 18034 3000 17356 41661;41662 48264;48265 48264 2 SPPEQLPIVLQVLLSQVHR Unmodified 2152.2368 0.23682323 444 A2ACM0;Q8K4Q0 Rptor Regulatory-associated protein of mTOR yes no 0 0 0 0 11 0 1 96.724 96.724 3 1.6995E-05 31593 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.942 51.565 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 0 3118.4 18035 444 17357 41663 48266 48266 1 SPPGQVTEAVK Unmodified 1111.5873 0.58733824 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 8 3.56 1 1 1 46.159 46.159 2;3 5.1385E-05 13534 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.276 56.441 39.449 17.091 64.814 28.243 37.405 0 37 19 65 28 37 0 1 1 2 1 1 0 13309 18036 1548 17358 41664;41665;41666 48267;48268;48269 48268 3 SPPLLGSESPYEDFLSADSK Unmodified 2138.0055 0.005545473 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 3.56 1 1 1 81.915 81.915 3 6.0485E-11 30348 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.609 65.531 127.98 63.522 77.889 128.73 29.288 59.696 120 65 75 121 28 56 3 2 2 2 1 1 19199 18037 1382 17359 41667;41668;41669 48270;48271;48272 48271 3 SPPSETEGSDGR Unmodified 1217.516 0.51602379 2768 Q91XU3 Pip4k2c Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma yes yes 0 0 0 0 13 0 1 27.838 27.838 2 1.5832E-05 5620 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.97 77.819 0 9.576 0 0 0 20.254 0 9 0 0 0 19 0 1 0 0 0 1 1420.6 18038 2768 17360 41670 48273 48273 1 SPPTSASVSTVIDGPTQILVR Unmodified 2124.1426 0.14264808 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8.67 3.09 1 1 1 73.056 73.056 3 1.2819E-13 25341 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.57 93.205 139.31 59.584 30.194 171.35 99.344 166.39 130 56 28 158 103 158 4 2 1 4 4 5 69653 18039 2479 17361 41671;41672;41673 48274;48275;48276;48277;48278;48279 48277 6 SPPTVLVICGPGNNGGDGLVCAR Deamidation (N) 2310.1097 0.10965016 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 1 0 0 6.5 0.5 1 1 73.401 73.401 3 5.6795E-12 25556 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.681 68.417 20.387 0 0 0 0 20.254 19 0 0 0 0 19 1 0 0 0 0 1 3133.5 18040 2617 17362 41674;41675 48280;48281 48281 950;951 2 SPPYTAFLGNLPYDVTEDSIK Unmodified 2326.1369 0.136894 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 0 8 0 1 89.998 89.998 3 0.0032862 32618 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.683 15.672 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18041 2377 17363 41676 48282 48282 1 SPPYTAFLGNLPYDVTEDSIKDFFR Unmodified 2891.4018 0.40177589 2377 Q8BGD9;B2RWE8 Eif4b Eukaryotic translation initiation factor 4B yes no 0 0 0 1 8.5 0.5 1 1 99.623 99.623 4 4.4082E-11 35536 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.122 51.811 0 0 30.296 0 29.288 0 0 0 28 0 28 0 0 0 2 0 2 0 7224.3 18042 2377 17364 41677;41678 48283;48284 48283 2 SPQGLGASTAEISAR Unmodified 1443.7318 0.73177065 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;G3UYR6 Ptprd Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 0 0 0 0 5 0 1 48.278 48.278 2 0.0031084 15157 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.802 39.641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18043 642 17365 41679 48285 48285 1 SPQHYSR Unmodified 873.40931 0.4093143 878 E9Q0W6;E9Q4K0;Q8BL65;F6UI99;F6VVW4;D3Z0Y4;F7A5C5;D3YYR9 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 0 5.5 0.5 1 1 19.244 19.244 3 0.03793 2677 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.679 24.578 0 0 0 6.3517 10.969 7.149 0 0 0 6 11 7 0 0 0 1 1 1 975.74 18044 878 17366 41680;41681 48286;48287 48286 2 SPQVLYSPVSPLSPHR Unmodified 1762.9366 0.93661847 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 9 0 1 58.431 58.431 3 0.00015475 17153 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.764 41.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18045 1275 17367 41682 48288 48288 1 SPSAEAAAPPPGPR Unmodified 1303.6521 0.65206377 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4 0 1 37.175 37.175 3 1.4902E-07 10212 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.278 55.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18046 1999 17368 41683 48289 48289 1 SPSAQLMEQVAQLK Unmodified 1528.7919 0.79192807 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 8.5 0.5 1 1 74.881 74.881 3 5.0667E-05 25692 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.102 54.766 59.613 59.584 79.767 0 67.99 99.138 56 56 74 0 65 93 1 1 1 0 1 1 11037 18047 895 17369 41684;41685 48290;48291 48290 2 SPSDSSTASTPIAEQIER Unmodified 1874.8858 0.88576469 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 4.8 4.17 2 1 1 1 51.223 51.223 2;3 9.127E-14 16858 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.14 95.109 128.82 57.428 174.73 126.15 167.56 204.99 121 56 167 120 168 196 5 2 6 3 5 5 112740 18048 3267 17370 41686;41687;41688;41689;41690 48292;48293;48294;48295;48296;48297;48298 48297 7 SPSDTSEQPR Unmodified 1102.4891 0.48908076 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 1.5 0.5 1 1 25.82 25.82 2 5.2105E-05 4792 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.71 63.614 0 29.792 58.961 97.149 52.446 48.564 0 28 56 93 56 46 0 1 1 2 2 1 30381 18049 1044 17371 41691;41692 48299;48300 48299 2 SPSEGTDEK Unmodified 948.40362 0.4036198 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 2.5 0.5 1 1 32.059 32.059 2 0.0058165 8356 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.287 21.314 29.904 100.8 23.536 53.408 49.587 38.027 28 97 28 51 51 37 1 2 1 1 1 1 7945.4 18050 814 17372 41693;41694 48301;48302 48302 2 SPSELFAQHIVTIVHHVK Unmodified 2041.1109 0.11089444 2037 Q569Z6;Q8BZN7;F6YSQ2 Thrap3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 0 10 0 1 66.148 66.148 5 0.00012731 18656 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.215 49.445 39.015 45.023 77.17 0 0 0 37 46 74 0 0 0 1 1 1 0 0 0 3414.7 18051 2037 17373 41695 48303 48303 1 SPSFQTQK Unmodified 921.4556 0.45559579 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 7 0 1 42.54 42.54 2 0.045798 11041 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.347 23.118 48.448 43.741 115.79 32.364 62.501 116.54 46 46 111 37 65 111 1 1 1 1 1 1 4797.7 18052 885 17374 41696 48304 48304 1 SPSPKPR Unmodified 767.42899 0.42898711 2455 Q8BTI8 Srrm2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 1 8 0 1 23.265 23.265 3 0.03905 3395 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.039 48.884 39.391 16.929 37.731 24.447 33.449 28.894 37 19 37 25 34 28 1 1 1 1 1 1 1202.9 18053 2455 17375 41697 48305 48305 1 SPSPSPTSPGSLR Unmodified 1268.6361 0.63607935 102 A0A0G2JGQ6;Q9JLM8;Q80VB6;A0A0G2JE54;Q8CCN4;A0A0G2JGH1;Q1EDH1;H7BX36;A0A0G2JEN4;A8IP62 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 5.5 0.5 1 1 39.617 39.617 2 0.00261 10964 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.758 30.244 20.387 19.892 19.365 0 19.197 19.706 19 19 19 0 19 19 1 1 1 0 1 1 5016.2 18054 102 17376 41698;41699 48306;48307 48306 2 SPSQSDPVLK Unmodified 1056.5451 0.54513908 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 9.5 3.5 1 1 45.854 45.854 2 0.008408 13992 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.289 11.881 49.179 0 30.048 0 0 39.442 46 0 28 0 0 37 1 0 1 0 0 1 3542.9 18055 2899 17377 41700;41701 48308;48309 48309 2 SPSSDSWTCADASTGR Unmodified 1683.6795 0.67947708 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 4 0 1 44.615 44.615 3 0.00038617 13683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.489 40.749 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 3627.9 18056 3453 17378 41702 48310 48310 1 SPSSEEIER Unmodified 1032.4724 0.47236807 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 32.91 32.91 2 2.0596E-06 8046 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 159.58 83.363 187.16 191.72 187.7 158.88 99.965 157.25 176 195 186 157 102 148 3 4 2 2 2 3 48944 18057 3373 17379 41703;41704;41705;41706 48311;48312;48313;48314 48311 4 SPSTESQLMSK Unmodified 1193.5598 0.55980286 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 6 0 1 48.763 48.763 3 0.0011821 14759 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.64 40.258 93.471 81.552 91.001 95.64 31.114 132.36 88 84 93 93 32 125 2 2 2 2 1 2 6079.2 18058 3275 17380 41707 48315;48316 48316 2 SPSTGLYANLEK Deamidation (N) 1279.6296 0.62959699 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 1 0 0 5 0 1 61.103 61.103 3 0.0016464 21199 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.563 18.97 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 3304.6 18059 2702 17381 41708 48317 48317 974 1 SPSTGLYANLEK Unmodified 1278.6456 0.6455814 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 9.33 2.62 1 1 1 57.658 57.658 2;3 4.5295E-13 18301 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.17 80.106 88.789 162.13 0 229.76 288.3 230.37 83 158 0 214 288 222 2 3 0 3 3 3 19380 18060 2702 17381 41709;41710;41711 48318;48319;48320;48321 48318 4 SPSTISLK Unmodified 831.47018 0.47018322 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 8.5 0.5 1 1 50.738 50.738 2 0.017484 13447 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.906 30.093 60.088 0 126.2 81.704 137.98 106.47 56 0 120 83 139 102 1 0 1 1 2 1 11829 18061 3285 17382 41712;41713 48322;48323 48323 2 SPSVAVAQPK Unmodified 982.54475 0.54474515 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 9.33 2.62 1 1 1 43.92 43.92 2 0.0012069 11818 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.051 47.284 137.79 82.162 35.872 40.121 17.023 98.652 129 84 37 37 19 93 3 2 1 1 1 3 9909.9 18062 2396 17383 41714;41715;41716 48324;48325;48326 48324 3 SPSVSPDR Unmodified 843.40865 0.4086456 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 7.33 4.03 1 1 1 29.668 29.668 2 0.0089146 6704 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.6 53.858 20.387 47.999 94.833 86.16 0 78.884 19 46 93 84 0 74 1 1 2 3 0 2 18894 18063 1275 17384 41717;41718;41719 48327;48328;48329 48327 3 SPSVVISDDEPGYDLDLFCIPNHYAEDLEK Unmodified 3436.5657 0.56568269 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 4 0 2 87.927 87.927 4;5 0.0012304 33342 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.923 26.127 0 0 5 15 0 0 0 0 5 15 0 0 0 0 1 1 0 0 3152.7 18064 1295 17385 41720;41721 48330;48331 48330 2 SPTDWALFTYEGNSNDIR Unmodified 2084.9439 0.94394827 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7 0 1 78.544 78.544 3 0.0017355 27887 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.326 23.506 0 0 80.438 15.973 0 79.95 0 0 75 19 0 75 0 0 1 1 0 1 5179.2 18065 2154 17386 41722 48332 48332 1 SPTSSPTPQR Unmodified 1056.52 0.51998696 118;1534;988 A0A0J9YUN4;A0A0J9YUE9;P39053;F6RRH9;F6TH70 Dnm1 Dynamin-1 no no 0 0 0 0 7 3.54 1 1 1 1 27.696 27.696 2 2.3735E-05 5806 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.82 89.983 203.04 172.39 263.28 101.24 201.49 147.75 191 173 258 102 199 142 3 3 4 2 3 3 50066 18066 118;1534;988 17387 41723;41724;41725;41726 48333;48334;48335;48336 48333 4 SPTTELSSK Unmodified 948.47639 0.47639081 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 8 3.56 1 1 1 43.572 43.572 2 0.00079717 12445 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 115.86 71.108 102.97 144.79 88.951 195.62 126.59 155.75 97 144 88 186 130 148 2 3 1 3 2 2 17898 18067 885 17388 41727;41728;41729 48337;48338;48339 48338 3 SPTWTALSR Unmodified 1017.5243 0.52434406 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 9.25 2.28 1 1 1 1 52.516 52.516 2 0.00033609 14396 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128 61.566 866.96 771.88 611.62 590.72 941.08 1046.6 815 790 617 590 960 1007 3 3 2 3 3 3 155730 18068 2253 17389 41730;41731;41732;41733 48340;48341;48342;48343 48342 4 SPVASIVYELNPNFKPPK Unmodified 1999.0779 0.077862976 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 10 0.816 1 1 1 78.052 78.052 3;4 1.5391E-06 24225 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.772 52.969 176.97 102.56 106.71 201.82 263.52 249.93 166 102 102 195 269 241 2 1 1 3 3 2 23405 18069 2441 17390 41734;41735;41736 48344;48345;48346 48345 3 SPVEFVEYNK Unmodified 1210.587 0.58700389 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 64.645 64.645 3 0.0013922 21344 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.977 35.018 89.493 82.291 62.836 96.518 73.707 87.441 84 84 65 93 74 84 2 3 2 3 2 3 16230 18070 3373 17391 41737;41738;41739;41740 48347;48348;48349;48350 48349 4 SPVISRPK Unmodified 882.5287 0.52870115 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173 Enah Protein enabled homolog yes no 0 0 0 1 9 0 1 36.272 36.272 3 0.02689 7317 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.27 41.935 128.3 90.3 0 139.65 129.56 0 120 93 0 130 130 0 1 1 0 1 1 0 6463.9 18071 56 17392 41741 48351 48351 1 SPVPSQQASPK Unmodified 1124.5826 0.58258722 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6 0 1 39.913 39.913 3 0.060939 10566 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.845 2.1222 59.702 34.749 35.503 48.162 0 59.696 56 37 37 46 0 56 1 1 1 1 0 1 7358.5 18072 3285 17393 41742 48352 48352 1 SPVPVSGQK Unmodified 897.49198 0.4919813 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 8 0 1 42.796 42.796 2 0.02205 10502 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.216 37.322 39.701 0 0 0 0 39.442 37 0 0 0 0 37 1 0 0 0 0 1 2024.1 18073 204 17394 41743 48353 48353 1 SPVTNIAR Unmodified 856.47667 0.47666558 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 7 0 1 39.503 39.503 2 0.0088683 9689 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.72 26.532 186.45 170.38 257.95 225.48 211.73 233.81 176 176 258 224 220 225 1 1 1 1 1 1 28716 18074 1836 17395 41744 48354 48354 1 SPVVSGDTSPR Unmodified 1100.5462 0.54620171 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 5.5 0.5 1 1 35.951 35.951 2 0.0024097 9164 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.24 41.964 74.641 45.921 39.884 0 46.477 47.71 70 46 37 0 46 46 2 1 1 0 1 1 28560 18075 572;46 17396 41745;41746 48355;48356 48355 2 SPVYLTVLK Unmodified 1018.6063 0.60628277 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10.5 1.12 1 1 1 1 70.185 70.185 2;3 0.0003301 20768 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.12 70.84 250.76 299.69 219.1 335.38 302.72 155.76 236 301 227 324 306 148 3 4 3 4 3 2 79333 18076 1899 17397 41747;41748;41749;41750 48357;48358;48359;48360 48358 4 SPWASDFKDFQEPLPQK Unmodified 2018.9738 0.97379183 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 8 0 1 72.039 72.039 3 0.0098307 24264 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.33 27.035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18077 510 17398 41751 48361 48361 1 SPWQWGK Unmodified 887.42899 0.42898711 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 0 0 0 10 0 1 62.842 62.842 2 0.035629 17307 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.784 35.358 142.35 111.37 146.91 130.69 140.51 119.65 134 116 148 130 144 116 1 1 1 1 1 1 10682 18078 1625 17399 41752 48362 48362 1 SPWSNKYDPPLEDGAMPSAR Unmodified 2217.0161 0.016067355 495;1565 A2AMW0;F7CAZ6;P47757;A0A0A0MQI9;F6YHZ8 Capzb F-actin-capping protein subunit beta no no 0 0 0 1 7 0 1 62.308 62.308 3 0.0014508 20270 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.968 31.871 33.917 21.31 52.313 31.858 0 0 32 23 51 32 0 0 1 1 1 1 0 0 5851.9 18079 495;1565 17400 41753 48363 48363 1 SPYCITK Unmodified 867.41604 0.41603916 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 0 8 0 1 49.02 49.02 2 0.06506 13377 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.547 28.412 128.19 0 96.293 82.769 117.53 0 120 0 93 83 116 0 1 0 1 1 1 0 15191 18080 2336 17401 41754 48364 48364 1 SPYFPNQYSQDK Unmodified 1472.6572 0.65720872 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 7 0 1 56.136 56.136 3 0.02416 17390 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.644 20.086 128.16 119.04 0 108.52 157.79 163.93 120 120 0 102 161 158 1 1 0 1 1 1 7594.9 18081 1882 17402 41755 48365 48365 1 SPYFPNQYSQDK Deamidation (N) 1473.6412 0.64122431 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 1 0 0 8 0 1 56.018 56.018 3 0.0007916 16743 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.089 40.786 0 48.944 0 0 181.89 64.1 0 46 0 0 176 65 0 1 0 0 1 1 4718.3 18082 1882 17402 41756 48366 48366 772 1 SPYGGGRPGR Unmodified 1002.4995 0.49952629 2268 Q6ZWN5 Rps9 40S ribosomal protein S9 yes yes 0 0 0 1 8 0 1 25.188 25.188 3 0.02277 3724 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.235 31.246 0 0 0 20.767 0 29.848 0 0 0 19 0 28 0 0 0 1 0 1 2620.5 18083 2268 17403 41757 48367 48367 1 SPYLYPLYGLGELPQGFAR Unmodified 2140.0993 0.099326699 1595;2132 Q61598;A0A1Y7VL99;P50396 Gdi2;Gdi1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha no no 0 0 0 0 9.78 3.29 1 1 2 3 1 1 91.113 91.113 2;3 4.3684E-26 29628 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 136.3 105.42 261.05 152.84 120.69 179.4 304.41 205.08 246 155 120 172 301 198 10 7 5 7 8 7 612520 18084 2132;1595 17404 41758;41759;41760;41761;41762;41763;41764;41765;41766 48368;48369;48370;48371;48372;48373;48374;48375;48376;48377;48378;48379;48380;48381;48382;48383;48384 48374 17 SPYQEFTDHLVK Unmodified 1462.7092 0.70924429 1449 P25444 Rps2 40S ribosomal protein S2 yes yes 0 0 0 0 6 0 1 62.224 62.224 3 5.3393E-06 21119 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.337 66.329 109.45 0 0 79.024 98.766 125.1 102 0 0 74 102 120 1 0 0 1 1 1 10532 18085 1449 17405 41767 48385 48385 1 SQAEFDK Acetyl (Protein N-term) 865.38176 0.38176214 1499 P31786;M0QWU8 Dbi Acyl-CoA-binding protein yes no 1 0 0 0 4.75 4.82 1 1 1 1 48.262 48.262 2 1.3608E-05 15414 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 86.086 62.114 2439.8 1707.8 2013.6 1207.2 3078.8 2262.7 2293 1776 1999 1261 3065 2205 7 5 4 6 4 5 654430 18086 1499 17406 41768;41769;41770;41771 48386;48387;48388;48389;48390;48391;48392 48388 7 SQAFIEMETR Unmodified 1210.5652 0.56522259 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 0 5 0 1 55.064 55.064 2 0.061059 18374 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.013 28.927 59.671 0 70.029 0 114.17 56.438 56 0 65 0 111 56 1 0 1 0 1 1 4729.2 18087 2602 17408 41772 48393 48393 1 SQAIDLLYWR Unmodified 1263.6612 0.66117189 2279 Q7M6W1;A3QM89 Rtn1 Reticulon yes no 0 0 0 0 10 2.16 1 1 1 76.609 76.609 2;3 5.7548E-07 29168 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.84 91.818 138.19 304.27 144.47 216.19 591.59 28.503 130 297 139 204 576 28 1 4 1 2 4 1 47070 18088 2279 17409 41773;41774;41775 48394;48395;48396;48397 48397 4 SQAVQQLK Unmodified 900.50288 0.50288033 2872 Q99MN1;Q8R2P8 Kars Lysine--tRNA ligase yes no 0 0 0 0 7.5 0.5 1 1 42.999 42.999 2 0.013746 11287 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.67 40.99 49.137 40.432 37.158 58.993 36.358 137.54 46 38 37 56 37 130 1 1 1 1 1 2 4822.2 18089 2872 17410 41776;41777 48398;48399 48398 2 SQAYADYIGFILTLNEGVK Unmodified 2101.0732 0.073171528 1654 P58389;A2AWE9 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 9.5 0.5 1 1 98.968 98.968 3 1.6191E-05 35385 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.362 39.927 24.679 0 0 0 24.244 25.041 23 0 0 0 24 24 2 0 0 0 2 1 2314.6 18090 1654 17411 41778;41779 48400;48401 48400 2 SQDAEVGDGTTSVTLLAAEFLK Unmodified 2251.122 0.12197221 1822 P80313 Cct7 T-complex protein 1 subunit eta yes yes 0 0 0 0 7.4 2.87 1 2 1 1 94.311 94.311 3;4 7.3561E-15 35644 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.373 64.295 54.439 27.816 28.419 73.462 28.217 48.231 51 28 28 69 28 46 3 3 1 3 2 3 23669 18091 1822 17412 41780;41781;41782;41783;41784 48402;48403;48404;48405;48406 48404 5 SQDPGAVVLGK Unmodified 1069.5768 0.57677356 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 6.5 0.5 1 1 55.383 55.383 3 0.0011182 17928 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.395 36.437 108.86 128.47 150.38 57.967 0 0 102 130 149 56 0 0 1 2 2 1 0 0 5092.8 18092 121 17413 41785;41786 48407;48408;48409 48408 3 SQDPIIPALAK Unmodified 1151.655 0.65502388 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 7.5 0.5 1 1 66.12 66.12 3 0.0010448 22050 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.262 42.276 48.941 38.413 127.21 25.973 122.12 94.587 46 37 121 28 121 92 1 1 2 1 2 2 17407 18093 2295 17414 41787;41788 48410;48411 48410 2 SQDSGIAEMEELPVPHNIK Unmodified 2093.0099 0.0099193444 2386 Q8BGT8;F6U6Z2;E0CXW9 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 4.5 0.5 1 1 67.296 67.296 3;4 1.27E-07 24218 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.414 68.086 48.956 0 67.582 56.158 73.563 67.191 46 0 65 56 75 65 1 0 1 1 2 2 8330.2 18094 2386 17415 41789;41790 48412;48413 48412 2 SQDSVLDPAER Unmodified 1215.5731 0.57314474 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 2.5 0.5 1 1 44.3 44.3 2 0.0028564 13708 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.332 36.71 20.24 0 54.264 18.316 50.687 52.92 19 0 51 19 51 51 1 0 2 1 2 2 7225.3 18095 581 17416 41791;41792 48414;48415 48414 2 SQDTEVDMK Acetyl (Protein N-term) 1093.4598 0.45975447 1348 P10852;A0A0U1RP98;A0A0U1RPG5;A0A0U1RP32 Slc3a2 4F2 cell-surface antigen heavy chain yes no 1 0 0 0 1 0 1 48.304 48.304 2 0.0029094 14395 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.433 46.002 0 0 0 19.872 47.6 18.896 0 0 0 19 47 19 0 0 0 1 1 1 3812.6 18096 1348 17417 41793 48416 48416 1 SQEDMSEPVR Unmodified 1176.5081 0.50810164 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 1 0 1 35.896 35.896 2 0.0056257 9434 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.944 51.516 0 9.2562 19.128 19.627 0 29.848 0 9 19 19 0 28 0 1 1 1 0 1 4404.9 18097 934 17418 41794 48417 48417 1 SQEDQLSR Unmodified 961.44649 0.44648767 2801 Q921W0 Chmp1a Charged multivesicular body protein 1a yes yes 0 0 0 0 2 0 1 28.529 28.529 2 0.0027082 6455 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.82 72.389 69.27 94.281 0 89.016 90.569 76.3 65 93 0 83 93 74 1 1 0 1 1 1 11252 18098 2801 17419 41795 48418 48418 1 SQEEAEGILQQYIER Unmodified 1791.8639 0.86390703 675 D3YU22;Q3UH68;D3YU59;D3Z589 Limch1 LIM and calponin homology domains-containing protein 1 yes no 0 0 0 0 4 0 1 73.126 73.126 3 0.038786 26801 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.127 19.247 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18099 675 17420 41796 48419 48419 1 SQEEAPGHR Unmodified 1009.4577 0.45772105 1898 Q0VGU4 Vgf yes yes 0 0 0 0 1 0 1 17.628 17.628 3 0.00054054 2756 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 93.598 76.085 5.3507 2.8312 0 0 0 7.462 5 3 0 0 0 7 1 1 0 0 0 1 1746.4 18100 1898 17421 41797 48420 48420 1 SQEHFSHNTVR Unmodified 1340.6222 0.62216062 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 5 0 1 23.488 23.488 4 0.0043643 3751 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.7 38.81 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1190.5 18101 811 17422 41798 48421 48421 1 SQELEVK Unmodified 831.4338 0.43379771 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 4 0 1 44.957 44.957 2 0.026918 13867 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.948 34.399 99.163 0 105.25 103.55 88.545 115.8 93 0 102 102 93 111 1 0 1 1 1 1 8936.4 18102 3204 17423 41799 48422 48422 1 SQELHELYEGLK Unmodified 1444.7198 0.71980898 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 6 0.816 1 1 1 62.484 62.484 3 1.4528E-05 21336 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.264 65.206 0 194.67 276 294.44 149.15 243.06 0 186 278 287 151 232 0 2 3 3 1 3 33835 18103 2587 17424 41800;41801;41802 48423;48424;48425;48426 48424 4 SQEPVTLDFLDAELENEIK Unmodified 2189.074 0.073959389 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 4.5 0.5 1 1 91.506 91.506 3 5.0841E-08 33939 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.36 59.029 0 0 9.3319 9.1156 17.784 6.1453 0 0 9 9 18 6 0 0 1 1 2 1 4713 18104 882 17425 41803;41804 48427;48428 48427 2 SQEQLAAELAEYTAK Unmodified 1650.8101 0.81008055 1451 P26040 Ezr Ezrin yes yes 0 0 0 0 5 0 1 74.393 74.393 2 0.003281 27432 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.175 31.958 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18105 1451 17426 41805 48429 48429 1 SQESGYYDR Unmodified 1103.452 0.45196697 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 0 3 0.816 1 1 1 31.733 31.733 2 0.00059646 8219 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.6 84.583 138.08 204.43 134.73 151.78 182.66 163.74 130 203 140 148 186 158 2 4 3 2 3 3 34735 18106 2602 17427 41806;41807;41808 48430;48431;48432;48433 48432 4 SQEVAYTDIK Unmodified 1152.5663 0.56626845 787 D3Z7E5;Q2NL51 Gsk3a Glycogen synthase kinase-3 alpha yes no 0 0 0 0 4.5 0.5 1 1 51.536 51.536 2 0.0066433 16737 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.2 22.782 39.701 20.216 0 69.844 63.84 57.874 37 19 0 65 66 56 1 1 0 2 2 2 5028.3 18107 787 17428 41809;41810 48434;48435;48436 48436 3 SQEVEDK Unmodified 833.37668 0.37667677 1481;2139 P28738;Q61768;E9QAK5 Kif5c;Kif5b Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein no no 0 0 0 0 3 0 1 33.935 33.935 2 0.0084997 9190 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.41 49.513 0 176.77 55.076 104.34 205.39 93.277 0 167 65 102 204 93 0 1 1 1 1 1 6738.4 18108 1481;2139 17429 41811 48437 48437 1 SQFEELCAELLQK Unmodified 1593.7709 0.77085827 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 8 3.56 1 1 1 81.747 81.747 3 8.6874E-05 30270 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.063 53.697 117.72 187.52 82.45 174.73 211.57 123.75 111 185 93 168 214 120 2 3 2 3 3 2 24438 18109 2137 17430 41812;41813;41814 48438;48439;48440 48439 3 SQFSESESR Unmodified 1055.452 0.45196697 249 A0A1B0GR85;A0A1D5RLN6;Q8BRV5 Kiaa1671 Uncharacterized protein KIAA1671 yes no 0 0 0 0 8 5 1 1 31.253 31.253 2 0.0028675 8002 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.098 56.034 50.016 45.034 95.792 17.918 27.961 38.644 47 47 92 19 28 37 1 2 2 1 1 1 4293.9 18110 249 17431 41815;41816 48441;48442 48441 2 SQFTITPGSEQIR Unmodified 1462.7416 0.74160705 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 55.094 55.094 2;3 5.8487E-33 16937 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 184.34 123.82 99.563 194.54 264.08 343.5 251.7 396.83 93 186 260 333 259 379 2 4 3 6 3 6 156470 18111 2843 17432 41817;41818;41819;41820;41821;41822 48443;48444;48445;48446;48447;48448;48449 48447 7 SQGEEVDFAR Unmodified 1136.5098 0.5098162 2980 Q9CWS0 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 42.778 42.778 2 2.4646E-08 13109 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 144.28 86.421 305.87 155.65 373.79 285.72 466.9 422.36 287 158 365 278 462 403 2 3 4 4 3 4 148140 18112 2980 17433 41823;41824;41825;41826 48450;48451;48452;48453;48454 48451 5 SQGGDGYYGR Unmodified 1058.4417 0.44173664 347 F8VPK5;A0A1Y7VMN0;P70336;P70335 Rock2;Rock1 Rho-associated protein kinase;Rho-associated protein kinase 2;Rho-associated protein kinase 1 yes no 0 0 0 0 4 0 1 31.004 31.004 2 0.0011411 7329 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.428 57.707 0 0 0 30.604 0 39.442 0 0 0 28 0 37 0 0 0 1 0 1 2521.4 18113 347 17434 41827 48455 48455 1 SQGGEPTYNVAVGR Unmodified 1433.6899 0.68990583 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 0 0 0 5 0.816 1 1 1 43.748 43.748 2;3 1.3324E-31 13274 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 164.65 130.77 149.15 0 0 170.51 115.85 165.12 139 0 0 158 120 158 2 0 0 3 1 2 80792 18114 3220 17435 41828;41829;41830 48456;48457;48458 48456 3 SQGGGDSVSPTPPEGLAPGVEAGK Unmodified 2193.055 0.054955282 816 E9PUE7;Q5SSL4;Z4YN68;H3BKT3;H3BL84 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 4 0 1 57.973 57.973 3 0.002049 20144 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.579 16.926 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 4048.8 18115 816 17436 41831 48459 48459 1 SQGGSYGYR Unmodified 973.42536 0.42535829 1677 P60824;K4DI65 Cirbp Cold-inducible RNA-binding protein yes no 0 0 0 0 6 0 1 30.208 30.208 2 0.0017007 6119 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.013 72.217 9.5337 19.503 4.1918 0 19.38 14.371 9 19 5 0 19 14 1 1 1 0 1 1 1256.5 18116 1677 17437 41832 48460 48460 1 SQGSFEYQDTQDHDYGGR Unmodified 2088.8409 0.84093976 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 2.5 0.5 1 1 41.333 41.333 3 8.3907E-55 12600 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 144.17 134.25 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 4432.2 18117 1275 17438 41833;41834 48461;48462 48462 2 SQGTALEK Unmodified 832.42905 0.42904669 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 38.447 38.447 2 0.0011689 10426 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.25 75.669 1301.3 1324.7 1688.9 1448 1635.5 896.98 1224 1354 1700 1443 1641 862 4 7 7 6 4 6 378390 18118 1373 17439 41835;41836;41837;41838;41839 48463;48464;48465;48466;48467;48468;48469 48463 7 SQGTYSDTK Unmodified 985.43525 0.43525428 1424 P20357;G3UZE9;Q80X35;Q80ZL4;Q3TLQ0;E9Q8Y2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 5 0 1 33.539 33.539 2 0.018451 8111 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.435 34.214 0 0 0 0 39.091 19.139 0 0 0 0 38 19 0 0 0 0 1 1 2472.1 18119 1424 17440 41840 48470 48470 1 SQHDEQVR Unmodified 997.45772 0.45772105 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 1.5 0.5 1 1 16.507 16.507 3 0.0012649 2693 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.81 60.384 5.3329 0 5.3939 6.4489 11.938 9.2533 5 0 5 6 12 9 2 0 1 1 2 2 1029.5 18120 182 17441 41841;41842 48471;48472 48471 2 SQHTGNAQVSQTK Unmodified 1384.6695 0.66950474 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 5.5 0.5 1 1 26.115 26.115 3 5.1456E-05 4373 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.371 70.432 14.873 23.245 13.382 19.543 37.314 14.277 14 23 14 19 37 14 1 2 1 1 2 1 2775 18121 2744 17442 41843;41844 48473;48474 48474 2 SQIHDIVLVGGSTR Unmodified 1480.7998 0.79979063 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 9.4 2.06 1 1 1 1 1 50.643 50.643 2;3 4.2505E-17 14235 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.66 103.54 265.67 196.7 346.11 269.96 202.41 162.15 250 204 343 269 204 157 3 2 3 3 3 2 172070 18122 1762 17443 41845;41846;41847;41848;41849 48475;48476;48477;48478;48479 48476 5 SQITEPDPDVK Unmodified 1227.5983 0.59829686 1234 O55091 Impact Protein IMPACT yes yes 0 0 0 0 4 0 1 49.006 49.006 3 0.0005106 15786 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.692 55.456 0 0 0 38.885 82.733 66.929 0 0 0 37 83 65 0 0 0 1 1 1 7418.8 18123 1234 17444 41850 48480 48480 1 SQLDINNKK Unmodified 1058.572 0.57202253 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 8 0 1 43.435 43.435 3 0.014403 10807 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.547 33.433 0 185.86 211.49 175.72 214.73 0 0 178 213 176 213 0 0 1 1 1 1 0 11962 18124 815;2590 17445 41851 48481 48481 1 SQLLGSAHEVQR Unmodified 1323.6895 0.6895119 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6 0 1 38.848 38.848 3 9.2022E-15 10170 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.13 81.436 187.35 298.06 0 220.42 251.7 264.65 176 292 0 206 259 255 1 1 0 1 1 1 37009 18125 551 17446 41852 48482 48482 1 SQLLILDR Unmodified 956.56548 0.56548059 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 61.822 61.822 2 0.001275 19508 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 141.02 74.668 761.54 1265.5 1615.6 1484.4 1982.9 977.18 717 1263 1628 1471 1993 943 1 4 4 3 4 3 384490 18126 1160 17447 41853;41854;41855;41856 48483;48484;48485;48486 48484 4 SQLPADFTK Unmodified 1005.5131 0.51311067 62 A0A0A6YWG7 Rapgef2 yes yes 0 0 0 0 7 0 1 56.018 56.018 3 0.062613 17315 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.402 0 78.859 42.706 55.052 57.927 0 0 74 46 56 56 0 0 1 1 1 1 0 0 2490.6 18127 62 17448 41857 48487 48487 1 SQLQPEPAK Unmodified 996.52401 0.52400971 2249 Q6PH08;Q3UHT7;A0A1B0GSQ8 Erc2 ERC protein 2 yes no 0 0 0 0 5 0 1 41.504 41.504 2 0.0037311 11853 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.247 34.839 0 29.792 0 30.256 18.484 0 0 28 0 28 19 0 0 1 0 1 1 0 2402 18128 2249 17449 41858 48488 48488 1 SQLSCVVVDDIER Unmodified 1518.7348 0.73480712 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 5.83 3.34 1 2 1 1 1 64.548 64.548 2;3 4.2247E-27 22887 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 174.05 124.75 168.26 198.39 183.87 207.11 65.797 261.17 158 195 186 200 65 246 3 4 4 5 2 4 220540 18129 1554 17450 41859;41860;41861;41862;41863;41864 48489;48490;48491;48492;48493;48494;48495 48491 7 SQLVSQK Unmodified 788.43922 0.43921744 728 D3YZ62;D3Z4J3;Q99104;F6TDE5;F6Z2S4;B8JK05 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 0 1 40.287 40.287 2 0.03442 9424 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.75 29.662 0 77.554 70.714 105.53 92.43 0 0 74 74 102 93 0 0 1 1 1 1 0 18369 18130 728 17451 41865 48496 48496 1 SQNEQEAFR Unmodified 1107.4945 0.49450049 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 32.892 32.892 2 2.1749E-05 8716 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 146.88 109.07 29.474 139.5 65.012 151.79 121.05 126.37 28 134 65 144 121 120 1 4 1 3 3 2 42897 18131 3402 17452 41866;41867;41868;41869 48497;48498;48499;48500 48498 4 SQNIITDSSSLNAEAIR Unmodified 1817.9119 0.91191986 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7 3.54 1 1 1 1 59.88 59.88 3 1.819E-06 20735 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.62 83.661 29.856 193.43 147.04 193.65 161.33 178.02 28 186 148 186 158 167 1 3 1 2 3 1 95185 18132 2148 17453 41870;41871;41872;41873 48501;48502;48503;48504 48502 4 SQNVMAAASIANIVK Unmodified 1515.8079 0.80791248 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 0 0 0 0 9.5 1.12 1 1 1 1 71.987 71.987 3 1.2426E-11 24248 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.79 93.49 0 69.16 0 89.695 54.456 65 0 65 0 83 56 65 0 1 0 1 1 1 22221 18133 1356 17454 41874;41875;41876;41877 48505;48506;48507;48508 48505 4 SQPDMAIMAVNSFVK Unmodified 1636.7953 0.79529888 3123 Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 7.5 0.5 1 1 80.283 80.283 3 0.00050627 28808 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.813 41.86 118.31 98.714 168.36 130.42 154.28 145.38 111 102 167 129 158 139 1 2 3 2 3 2 11900 18134 3123 17455 41878;41879 48509;48510;48511 48509 3 SQPELSTGK Unmodified 945.47673 0.47672516 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 5 0 1 41.388 41.388 2 0.0053292 11822 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.883 49.794 0 50.008 0 0 0 39.442 0 47 0 0 0 37 0 1 0 0 0 1 1971.4 18135 721 17456 41880 48512 48512 1 SQPGAEGSPESPPGR Unmodified 1451.6641 0.66408501 1358 P12657 Chrm1 Muscarinic acetylcholine receptor M1 yes yes 0 0 0 0 2 0 1 32.368 32.368 3 0.00037191 8168 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.038 39.321 0 0 20.19 8.267 19.494 0 0 0 19 9 19 0 0 0 1 1 1 0 1285.9 18136 1358 17457 41881 48513 48513 1 SQPSEQGAR Unmodified 958.44682 0.44682202 2666 Q8R4U7 Luzp1 Leucine zipper protein 1 yes yes 0 0 0 0 2.5 0.5 1 1 19.941 19.941 2 0.00039181 3131 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.82 81.145 0 0 0 20.421 18.405 15.465 0 0 0 19 19 15 0 0 0 1 1 1 1054 18137 2666 17458 41882;41883 48514;48515 48514 2 SQPTTPQETVTGK Unmodified 1372.6834 0.68342347 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 5 0 1 42.767 42.767 3 0.0032736 12427 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.643 35.779 30.044 0 0 0 56.251 67.685 28 0 0 0 56 65 1 0 0 0 1 1 3843.1 18138 3285 17459 41884 48516 48516 1 SQQPGGQLR Unmodified 969.49919 0.49919194 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 5.5 0.5 1 1 28.193 28.193 2 0.0010742 5176 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.36 48.893 40.582 38.006 0 51.371 0 49.036 38 37 0 47 0 46 2 1 0 2 0 1 6771.1 18139 885 17460 41885;41886 48517;48518 48518 2 SQQQDDIEELETK Unmodified 1561.7108 0.71076044 1829 P83741 Wnk1 Serine/threonine-protein kinase WNK1 yes yes 0 0 0 0 2 0 1 56.027 56.027 3 0.00014612 18891 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.209 46.888 0 0 19.26 29.139 16.868 48.555 0 0 19 28 19 46 0 0 1 1 1 1 3053.6 18140 1829 17461 41887 48519 48519 1 SQQQEPLLCPSYQSYFK Unmodified 2101.9779 0.97789093 664;649;663 CON__Q9UE12;CON__Q15323;CON__O76011;CON__Q8IUT8;CON__Q14525 no no 0 0 0 0 6.5 0.5 1 1 71.118 71.118 3;4 1.9942E-06 25287 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.526 59.038 40.213 56.09 46.801 27.167 71.503 135.47 38 56 46 28 74 129 2 2 1 1 2 2 6367 + 18141 664;649;663 17462 41888;41889 48520;48521 48520 2 SQQQLHSPALSPAHSPAK Unmodified 1882.965 0.96495848 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 7 0 1 38.417 38.417 4 6.7369E-07 9108 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.97 62.544 0 20.216 0 0 18.867 29.31 0 19 0 0 19 28 0 1 0 0 1 1 3320.2 18142 1275 17463 41890 48522 48522 1 SQQSEVTR Unmodified 933.45157 0.45157304 2747 Q91VW3 Sh3bgrl3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 0 0 5.4 3.93 1 1 1 1 1 21.833 21.833 2 1.1766E-23 3712 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 192.6 102.3 638.65 528.78 617.13 575.06 419.63 651.47 601 540 619 567 437 622 5 4 5 6 3 4 203720 18143 2747 17464 41891;41892;41893;41894;41895 48523;48524;48525;48526;48527;48528 48525 6 SQQYPAAR Unmodified 919.45118 0.45117911 2054 Q5PR72;Q922S4;A0A1B0GT58 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 5 0 1 27.863 27.863 2 0.049916 5448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.673 39.474 39.469 0 39.035 17.949 26.109 68.545 37 0 37 19 28 65 1 0 1 1 1 1 1918.1 18144 2054 17465 41896 48529 48529 1 SQSAAVTPSSSTSSAR Unmodified 1522.7223 0.72232817 53 Q9JKV1;A0A0A6YVU8 Adrm1;Gm9774 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 0 4.5 0.5 1 1 30.103 30.103 2;3 5.0937E-05 6955 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.987 50.644 0 9.576 0 19.407 14.204 5.33 0 9 0 18 14 5 0 1 0 2 1 1 3628.9 18145 53 17466 41897;41898 48530;48531 48530 2 SQSADTPGPTER Unmodified 1244.5633 0.56330834 2830 Q99JP6 Homer3 Homer protein homolog 3 yes yes 0 0 0 0 2 0 2 28.48 28.48 2;3 0.00079341 6403 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.434 39.593 0 0 0 35.825 12.998 0 0 0 0 33 14 0 0 0 0 1 1 0 2767.9 18146 2830 17467 41899;41900 48532;48533 48533 2 SQSAEAASEQR Unmodified 1162.5214 0.52144352 2248 Q6PGL7 Fam21 WASH complex subunit FAM21 yes yes 0 0 0 0 1.5 0.5 1 1 23.576 23.576 2 6.8454E-08 3989 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 116.01 81.479 34.149 37.065 0 0 51.529 52.896 32 37 0 0 51 51 1 1 0 0 2 2 7400.9 18147 2248 17468 41901;41902 48534;48535 48534 2 SQSLQDQPTR Unmodified 1158.5629 0.56291441 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 4 0 1 31.104 31.104 2 0.00074545 7360 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.692 66.956 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2890.2 18148 1081 17469 41903 48536 48536 1 SQSLTNAFNLPEPAPPRPSLSQDEVK Unmodified 2821.4246 0.4246366 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 10.2 2.77 1 1 2 68.611 68.611 4;5 4.3909E-23 22737 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.299 81.151 226.45 240.17 340.46 128.63 249.95 400.16 213 241 334 130 250 380 3 3 3 2 3 3 50425 18149 1282 17470 41904;41905;41906;41907 48537;48538;48539;48540 48538 4 SQSLTNAFSFSESSFFR Deamidation (N) 1941.8745 0.87447172 2173 Q64332 Syn2 Synapsin-2 yes yes 0 1 0 0 6 0 1 83.494 83.494 3 0.0042654 31089 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.68 35.988 20.387 0 0 0 19.874 0 19 0 0 0 19 0 1 0 0 0 1 0 1917.9 18150 2173 17471 41908 48541 48541 852 1 SQSLTNAFSFSESSFFR Unmodified 1940.8905 0.89045614 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 9 0.816 1 1 1 82.56 82.56 3 7.2082E-18 29191 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126 113.17 59.015 70.224 48.977 107.87 65.167 88.737 55 66 46 102 65 84 1 2 1 3 2 2 54154 18151 2173 17471 41909;41910;41911 48542;48543;48544;48545 48542 4 SQSSSQFR Unmodified 925.42536 0.42535829 2016 Q3UZJ4;Q61151;A0A1W2P7D8 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 0 5 0 1 26.256 26.256 2 0.0069682 4743 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.68 66.11 20.139 22.74 22.36 23.806 0 0 19 23 23 23 0 0 1 1 1 1 0 0 2511.1 18152 2016 17472 41912 48546 48546 1 SQTEEDCTEELFDFLHAR Unmodified 2225.9535 0.95352668 1866 P99028 Uqcrh Cytochrome b-c1 complex subunit 6, mitochondrial yes yes 0 0 0 0 6.25 3.96 1 1 1 1 77.362 77.362 3 7.498E-27 29301 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 141.6 131.54 179.95 182.78 110.05 137.43 96.439 138.58 169 186 112 131 93 130 5 7 4 4 2 4 117690 18153 1866 17473 41913;41914;41915;41916 48547;48548;48549;48550;48551;48552;48553;48554 48548 8 SQTERPVTADR Unmodified 1258.6266 0.6265773 2033 Q4VBF8;Q8C0T5 Sipa1l1 Signal-induced proliferation-associated 1-like protein 1 yes no 0 0 0 1 8 5 1 1 23.521 23.521 3 0.0077942 3726 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 59.198 25.332 30.044 0 0 30.604 0 0 28 0 0 28 0 0 1 0 0 1 0 0 3341.1 18154 2033 17474 41917;41918 48555;48556 48556 2 SQTTGFPSLITIFSAPNYLDVYNNK Unmodified 2789.3912 0.3912112 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 10.6 1.32 2 2 2 1 1 101.19 101.19 3;4 2.7697E-25 32877 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.14 88.524 233.38 71.169 348.52 214.63 233.47 147.89 219 67 330 216 233 142 5 3 9 6 4 7 217680 18155 811;1786 17475 41919;41920;41921;41922;41923;41924;41925;41926 48557;48558;48559;48560;48561;48562;48563;48564;48565;48566;48567 48560 11 SQTTGFPSLITIFSAPNYLDVYNNK Deamidation (N) 2790.3752 0.37522679 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 1 0 0 9.8 0.748 2 2 1 102.43 102.43 3;4 1.4635E-19 36380 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.453 69.31 11.657 14.567 29.422 0 9.414 29.848 11 14 28 0 9 28 2 1 2 0 1 2 24350 18156 811;1786 17475 41927;41928;41929;41930;41931 48568;48569;48570;48571;48572 48569 212;213 5 SQTTYYAQCYR Unmodified 1439.614 0.6139637 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 13 0 1 41.41 41.41 3 0.0074123 12148 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.567 41.195 0 69.16 0 61.208 0 138.58 0 65 0 56 0 130 0 1 0 1 0 1 3961.9 18157 533 17476 41932 48573 48573 1 SQVDHVIWPDGK Unmodified 1379.6834 0.68336389 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 6 0.816 1 1 1 55.846 55.846 3 3.2684E-05 18217 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.959 70.219 247.04 183.21 163.91 241.69 246.97 280.81 232 186 167 231 250 269 5 4 3 4 3 3 24392 18158 2298;1040 17477 41933;41934;41935 48574;48575;48576;48577;48578 48577 5 SQVDTQDQAR Unmodified 1146.5265 0.5265289 1954 Q3U186;A2AT41 Rars2 Probable arginine--tRNA ligase, mitochondrial yes no 0 0 0 0 2 0 1 25.69 25.69 2 0.0056257 5228 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.944 35.007 0 19.739 28.506 13.603 0 9.594 0 19 28 14 0 9 0 1 1 1 0 1 1154.4 18159 1954 17478 41936 48579 48579 1 SQVEEELFSVR Unmodified 1321.6514 0.65139506 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 65.872 65.872 2 0.002152 23501 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.92 48.799 20.244 28.427 0 0 0 20.254 19 28 0 0 0 19 1 1 0 0 0 1 5152.4 18160 3266 17479 41937 48580 48580 1 SQVEPEDPK Unmodified 1027.4822 0.48220447 2887 Q99PG2 Ogfr Opioid growth factor receptor yes no 0 0 0 0 2.5 0.5 1 1 39.713 39.713 3 0.0026502 11845 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.977 33.865 29.691 0 59.26 77.256 63.121 38.442 28 0 56 75 65 37 1 0 1 2 2 1 4240.7 18161 2887 17480 41938;41939 48581;48582 48582 2 SQVFSTAADGQTQVEIK Unmodified 1807.8952 0.89520716 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 60.84 60.84 3 4.2761E-09 21397 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.4 94.391 108.64 81.74 66.627 88.961 36.108 98.108 102 83 65 84 37 93 3 2 2 2 1 2 19091 18162 1533 17481 41940;41941;41942 48583;48584;48585 48585 3 SQVGPEDPK Unmodified 955.46108 0.4610751 2887 Q99PG2 Ogfr Opioid growth factor receptor yes no 0 0 0 0 4 0 1 38.805 38.805 2 0.0027649 10996 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.556 23.744 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 3233 18163 2887 17482 41943 48586 48586 1 SQVISNAK Unmodified 845.46068 0.46068117 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 9 2.94 1 1 1 39.533 39.533 2 0.0044152 8999 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.18 46.954 355.9 209.45 306.41 94.787 75.428 334.7 334 213 296 93 74 316 2 2 2 1 1 3 27111 18164 1957 17483 41944;41945;41946 48587;48588;48589 48588 3 SQVSEDGTLR Unmodified 1090.5255 0.52546627 2641 Q8R1F6 Hid1 Protein HID1 yes yes 0 0 0 0 3 0 1 35.406 35.406 2 0.011112 9960 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 64.906 32.014 0 20.216 0 40.441 0 0 0 19 0 37 0 0 0 1 0 1 0 0 2566.8 18165 2641 17484 41947 48590 48590 1 SQVTFLAPVTRPDK Unmodified 1557.8515 0.85149185 165 A0A0R4J094 yes yes 0 0 0 1 9 0 1 57.585 57.585 4 9.9136E-05 16781 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.789 52.591 59.76 65.13 0 78.657 118.29 105.36 56 65 0 74 120 102 1 1 0 1 1 1 6579.6 18166 165 17485 41948 48591 48591 1 SQWLDVK Unmodified 874.45487 0.45486751 1584 P48774;E9PVM7;E9Q024 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 9.67 2.49 1 1 1 60.544 60.544 3 0.012762 18199 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.547 14.988 275.64 142.72 260.55 0 236.72 142.79 259 148 250 0 231 139 3 2 3 0 3 2 13717 18167 1584 17486 41949;41950;41951 48592;48593;48594 48593 3 SQWLNEK Unmodified 903.44503 0.4450311 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 10.5 2.5 1 1 51.994 51.994 2;3 0.0070472 14946 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.548 28.221 724.61 784.07 901.71 795.9 909.67 955.83 684 797 913 793 936 921 2 2 2 2 2 2 69524 18168 1347 17487 41952;41953 48595;48596 48595 2 SQWSPALTISK Unmodified 1216.6452 0.64518747 1746;88 P62838;Q6ZWY6;A0A0G2JE32;A0A0G2JGL0;P61079 Ube2d2;Ube2d2b;Ube2d3 Ubiquitin-conjugating enzyme E2 D2;Ubiquitin-conjugating enzyme E2 D2B;Ubiquitin-conjugating enzyme E2 D3 no no 0 0 0 0 10 1.87 1 1 1 1 65.207 65.207 2;3 1.031E-07 18270 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.38 73.312 138.77 102.47 224.66 144.57 250.55 194.71 130 102 213 139 250 186 2 2 2 2 3 3 50611 18169 1746;88 17488 41954;41955;41956;41957 48597;48598;48599;48600 48599 4 SQYEQLAEQNR Unmodified 1364.6321 0.6320566 659 CON__P13645 yes yes 0 0 0 0 4 0 1 43.178 43.178 2 2.6053E-05 12975 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.08 72.917 20.387 0 0 40.441 0 49.036 19 0 0 37 0 46 1 0 0 1 0 1 4584.3 + 18170 659 17489 41958 48601 48601 1 SQYEQLAEQNRK Unmodified 1492.727 0.72701962 659 CON__P13645 yes yes 0 0 0 1 9.5 3.5 1 1 41.945 41.945 3 0.0008006 12255 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.201 25.572 63.724 73.639 47.892 158.91 58.137 255.25 60 74 51 149 60 241 1 1 1 2 1 2 15196 + 18171 659 17490 41959;41960 48602;48603 48603 2 SQYLQLGPSR Unmodified 1147.5986 0.59857163 2184 Q68ED7 Crtc1 CREB-regulated transcription coactivator 1 yes yes 0 0 0 0 8 0 1 52.585 52.585 2 0.013224 14996 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.815 30.443 0 126.37 78.391 86.047 0 69.29 0 120 83 83 0 65 0 1 1 1 0 1 9448 18172 2184 17491 41961 48604 48604 1 SREDMIDIK Unmodified 1105.5438 0.54375887 1515 P35279;D3YV69 Rab6a Ras-related protein Rab-6A yes no 0 0 0 1 5 0 1 48.679 48.679 3 0.019333 15256 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.908 11.113 0 77.982 45.093 0 0 39.442 0 74 46 0 0 37 0 1 1 0 0 1 2989.4 18173 1515 17492 41962 48605 48605 1 SRPGLCHMYK Unmodified 1247.5903 0.59033191 991 F6RT34;F7A0B0;F6TYB7 Mbp yes no 0 0 0 1 8 0 1 37.263 37.263 4 0.00527 7938 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.434 35.217 0 48.944 0 37.188 172.97 0 0 46 0 37 167 0 0 1 0 1 1 0 3006 18174 991 17493 41963 48606 48606 1 SRPSQEPTR Unmodified 1056.5312 0.53122035 1948 Q3TYL7;Q9QYJ3 Dnajb1 DnaJ homolog subfamily B member 1 yes no 0 0 0 1 4 0.816 1 1 1 18.291 18.291 3 0.00088998 2537 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.06 63.311 7.4533 17.024 9.7004 28.252 8.8191 0 7 16 9 26 9 0 1 1 1 2 1 0 3360.8 18175 1948 17494 41964;41965;41966 48607;48608;48609 48608 3 SRPVDILHSK Unmodified 1150.6459 0.64585618 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 1 7 0 1 42.419 42.419 4 0.0042243 10951 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.344 34.195 79.402 0 0 80.882 0 69.29 74 0 0 74 0 65 1 0 0 1 0 1 5842.3 18176 2045 17495 41967 48610 48610 1 SSAFFNFAFK Unmodified 1164.5604 0.56039521 1314 P05532 Kit Mast/stem cell growth factor receptor Kit yes yes 0 0 0 0 11.5 0.5 1 1 81.162 81.162 3 0.0027094 22241 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.353 34.239 39.454 72.818 18.75 0 0 39.442 37 74 19 0 0 37 1 2 1 0 0 1 6258.8 18177 1314 17496 41968;41969 48611;48612 48612 2 SSAGGGLR Unmodified 703.3613 0.36130147 1851 P97441;S4R1P0 Slc30a3 Zinc transporter 3 yes no 0 0 0 0 5 0 1 24.405 24.405 2 0.009767 4067 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.375 49.35 99.051 61.277 72.042 86.425 0 99.138 93 65 74 83 0 93 1 1 1 1 0 1 6530.6 18178 1851 17497 41970 48613 48613 1 SSANEDEAK Deamidation (N) 950.38288 0.38288436 2173 Q64332 Syn2 Synapsin-2 yes yes 0 1 0 0 1 0 2 31.232 31.232 2 0.0131 7122 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.36 70.705 89.117 54.327 124.61 34.202 158.1 162.85 84 56 120 37 158 157 2 1 2 1 2 2 9124.4 18179 2173 17498 41971;41972 48614;48615 48614 853 2 SSANEDEAK Unmodified 949.39887 0.39886877 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 3.5 0.5 1 1 29.011 29.011 2 0.0014614 6913 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.82 47.268 39.071 311.63 104.45 250.92 333.38 197.28 37 297 121 241 335 195 2 4 3 3 3 3 8893.3 18180 2173 17498 41973;41974 48616;48617;48618;48619;48620 48616 5 SSANEDEAKAETIR Unmodified 1519.7114 0.71142914 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 3 1 1 1 39.083 39.083 3 7.8286E-05 11565 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 79.394 59.013 167.35 91.864 108.21 134.35 68.591 176.06 157 93 111 130 74 167 2 1 1 1 1 2 22687 18181 2173 17499 41975;41976 48621;48622 48621 2 SSANEDEAKAETIR Deamidation (N) 1520.6954 0.69544472 2173 Q64332 Syn2 Synapsin-2 yes yes 0 1 0 1 2 0 1 41.2 41.2 3 0.0056439 12454 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.469 44.331 0 59.584 0 60.025 62.915 67.495 0 56 0 56 65 65 0 1 0 1 1 1 9234.9 18182 2173 17499 41977 48623 48623 853 1 SSAPTTPPSVDK Acetyl (Protein N-term) 1227.5983 0.59829686 2016 Q3UZJ4;Q61151;A0A1W2P7D8 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 1 0 0 0 3 0 1 49.01 49.01 2 0.053849 16187 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.706 27.975 29.865 0 30.145 0 28.291 29.041 28 0 28 0 28 28 1 0 1 0 1 1 3813.7 18183 2016 17500 41978 48624 48624 1 SSAQESTFFDDALIDELLR Unmodified 2156.0273 0.027343548 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 7.33 4.03 1 1 1 97.318 97.318 3 5.6087E-27 35694 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.75 108.21 5.3318 6.1683 2.1532 8.5573 9.9274 25.195 5 6 2 8 10 25 2 2 1 2 2 3 9589 18184 927 17501 41979;41980;41981 48625;48626;48627;48628 48627 4 SSASAPDVDDPEAFPALA Unmodified 1758.7948 0.79482442 128 A0A0N4SWH2;A0A0N4SV32;Q3UMP4;Q9CY58 Serbp1 Plasminogen activator inhibitor 1 RNA-binding protein yes no 0 0 0 0 2.5 0.5 1 1 77.378 77.378 3 9.6712E-05 29380 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.514 28.865 0 38.728 38.285 0 9.0934 29.589 0 37 37 0 9 28 0 3 2 0 1 2 14391 18185 128 17502 41982;41983 48629;48630;48631 48631 3 SSASFSTTAVSAR Unmodified 1270.6153 0.61534391 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 7.42 3.73 2 1 2 1 1 1 1 1 1 1 42.837 42.837 2;3 2.0954E-121 12567 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 248.21 176.79 335.16 235.48 524.39 458.81 588.81 409.64 315 245 514 454 593 399 5 4 7 8 7 7 181390 18186 1160 17503 41984;41985;41986;41987;41988;41989;41990;41991;41992;41993;41994;41995 48632;48633;48634;48635;48636;48637;48638;48639;48640;48641;48642;48643 48643 12 SSATVGPK Unmodified 745.39702 0.39701828 1468 P27661 H2afx Histone H2AX yes yes 0 0 0 0 7 0 1 35.083 35.083 2 0.01246 7546 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.296 49.65 59.428 64.209 56.44 0 56.251 67.685 56 65 56 0 56 65 1 1 1 0 1 1 5609 18187 1468 17504 41996 48644 48644 1 SSAVEHDGR Unmodified 956.43117 0.43117195 618 D3YUX2;B2RQR2;Q8VBX6 Mpdz Multiple PDZ domain protein yes no 0 0 0 0 2.5 0.5 1 1 18.92 18.92 3 0.0021536 2776 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.165 46.64 5.365 9.576 0 15.031 14.405 0 5 9 0 14 14 0 1 1 0 2 1 0 3018.7 18188 618 17505 41997;41998 48645;48646 48646 2 SSAYESLMEIVK Unmodified 1355.6643 0.66426794 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 7 0 1 79.318 79.318 3 0.014452 28270 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.616 24.153 0 37.905 87.532 0 95.321 56.976 0 37 83 0 93 56 0 1 1 0 1 1 4469.6 18189 1798 17506 41999 48647 48647 1 SSAYQELLQAK Unmodified 1236.635 0.63501672 2333 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1;A0A0A6YVV6 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 7 0 1 63.555 63.555 2 6.0931E-08 20885 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.9 73.225 0 0 29.01 28.875 0 0 0 0 28 28 0 0 0 0 1 1 0 0 2746.7 18190 2333 17507 42000 48648 48648 1 SSCSEYSPSPSLDSEAETLDGGPTR Unmodified 2628.1133 0.11333438 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 2.5 0.5 1 1 59.396 59.396 3 2.0083E-25 20439 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 112.23 103.41 29.912 17.005 7.8085 39.81 8.7953 5.079 28 18 9 37 9 5 2 2 1 2 1 1 10478 18191 1275 17508 42001;42002 48649;48650 48649 2 SSCTIIPLMK Unmodified 1148.5934 0.5933516 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 10 0 1 68.274 68.274 2 0.01886 19688 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.916 41.29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18192 1412 17509 42003 48651 48651 1 SSCYNTHEK Unmodified 1124.4557 0.45567214 1089 G3X9V4;Q01097;A0A0G2JEA7 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 5 0 1 28.027 28.027 3 0.021088 5536 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.981 30.82 0 38.429 56.196 46.929 0 49.036 0 37 56 46 0 46 0 1 1 1 0 1 1439.4 18193 1089 17510 42004 48652 48652 1 SSDASSESVQTVSQMEVQSLTATSEAANVPDR Unmodified 3310.5107 0.510687 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 2 0 1 73.53 73.53 4 0.024925 26704 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 23.751 17.971 0 0 14 0 0 0 0 0 14 0 0 0 0 0 1 0 0 0 2234.6 18194 2028 17511 42005 48653 48653 1 SSDDIDYR Unmodified 969.40395 0.40395415 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 1 0 1 36.937 36.937 2 0.015602 9812 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.313 64.774 0 19.58 38.061 17.927 30.388 35.377 0 19 37 19 31 34 0 1 1 1 1 1 5634.5 18195 570 17512 42006 48654 48654 1 SSDEAVILCK Unmodified 1120.5434 0.54342452 3352 Q9WVJ2;E9Q5I9;E9Q0U1 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 5 0 1 55.952 55.952 3 0.0021206 18759 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.347 36.604 69.235 33.746 57.044 26.353 45.266 47.744 65 37 56 28 46 46 1 1 1 1 1 1 3382.4 18196 3352 17513 42007 48655 48655 1 SSDEAYAIAK Unmodified 1053.4979 0.49785453 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 49.064 49.064 2;3 2.8246E-06 15635 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.57 59.643 426.38 199.21 304.65 188.95 405.22 405.24 400 214 302 195 409 391 3 2 2 2 3 3 46408 18197 3397 17514 42008;42009;42010 48656;48657;48658 48658 3 SSDFEGYEQDFAVLTAEITSK Acetyl (Protein N-term) 2378.0802 0.080166979 364 A0A286YDF2;Q5FWJ7;O89116 Vti1a Vesicle transport through interaction with t-SNAREs homolog 1A yes no 1 0 0 0 13 0 1 112.98 112.98 3 3.0657E-06 44659 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.553 40.515 12.876 0 0 0 12.234 9.2449 12 0 0 0 12 9 1 0 0 0 1 1 1241.7 18198 364 17515 42011 48659 48659 1 SSDGTVR Unmodified 720.34023 0.34023168 3099 Q9D967 Mdp1 Magnesium-dependent phosphatase 1 yes yes 0 0 0 0 2.5 0.5 1 1 19.158 19.158 2 0.025329 2837 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.75 24.84 40.234 59.388 40.383 53.351 83.056 38.176 38 59 43 51 83 37 2 2 2 1 2 1 4996.6 18199 3099 17516 42012;42013 48660;48661 48661 2 SSEAAHGATLPTR Unmodified 1296.6422 0.64222736 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4.67 1.25 1 1 1 31.137 31.137 3 0.0019293 6477 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.896 34.339 168.2 44.696 185.79 73.653 178.06 105.02 158 47 176 75 176 102 4 2 3 2 3 2 12907 18200 2186 17517 42014;42015;42016 48662;48663;48664;48665 48665 4 SSECDVGSSK Acetyl (Protein N-term) 1096.4343 0.434268 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417;A0A286YCN8 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 1 0 0 0 1 0 1 36.637 36.637 2 2.9096E-07 9722 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.732 66.581 39.316 26.434 42.289 30.781 89.037 46.495 37 28 42 32 88 46 1 1 1 1 1 1 12945 18201 353 17518 42017 48666 48666 1 SSEDGVVR Unmodified 847.40356 0.40356022 2308 Q80U04 Pja2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 0 0 0 1 0 1 28.416 28.416 2 0.04059 6083 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.464 37.622 20.387 0 0 20.767 0 29.848 19 0 0 19 0 28 1 0 0 1 0 1 2913.5 18202 2308 17519 42018 48667 48667 1 SSEDVSQR Unmodified 906.40429 0.4042885 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A2AGQ3;A2AGQ8 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 1.5 0.5 1 1 22.873 22.873 2 0.0012486 3750 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.86 73.504 89.57 55.551 47.314 91.229 113.52 105.49 84 56 46 88 116 102 2 1 1 2 2 2 20659 18203 204 17520 42019;42020 48668;48669 48668 2 SSEEAVR Unmodified 776.36645 0.36644643 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 13 0 1 23.275 23.275 2 0.043851 3554 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.178 19.363 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 16873 18204 2291 17521 42021 48670 48670 1 SSEEGPMLDQVPQQK Unmodified 1671.7774 0.77740021 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 4 0 1 54.331 54.331 3 0.065088 18347 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 31.58 8.2046 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18205 860 17522 42022 48671 48671 1 SSEEIEK Unmodified 820.38143 0.38142779 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 0 3 0 1 38.388 38.388 3 0.015696 11367 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.176 17.18 0 0 40.034 0 46.477 47.71 0 0 37 0 46 46 0 0 1 0 1 1 2494.8 18206 583 17523 42023 48672 48672 1 SSEEIESAFR Unmodified 1153.5251 0.52513192 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 52.49 52.49 2;3 2.5519E-129 17530 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 253.74 186.28 834.39 196.33 851.85 883.51 651.68 1037.8 783 204 829 866 687 991 3 2 3 4 3 4 217200 18207 551 17524 42024;42025;42026;42027 48673;48674;48675;48676 48674 4 SSEELPVDIILASVG Unmodified 1527.8032 0.80320426 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 5 0 1 106.33 106.33 2 0.0095958 36355 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.092 33.656 1.068 0.99199 0 1.0743 0.99665 0 1 1 0 1 1 0 1 1 0 1 1 0 532.64 18208 3291 17525 42028 48677 48677 1 SSEIEQAVQSLDR Unmodified 1460.7107 0.71070086 3090 Q9D898 Arpc5l Actin-related protein 2/3 complex subunit 5-like protein yes yes 0 0 0 0 4.4 1.02 1 2 1 1 66.791 66.791 2;3 2.5604E-27 23998 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 176.32 137.75 148.52 74.397 68.104 88.912 95.904 0 139 74 64 83 93 0 4 3 2 3 2 0 39630 18209 3090 17526 42029;42030;42031;42032;42033 48678;48679;48680;48681;48682 48679 5 SSELSRLAR Unmodified 1017.5567 0.55670682 3405 yes no 0 0 0 1 10 0 1 26.714 26.714 3 0.020242 3891 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.597 11.637 61.161 0 0 55.475 72.364 72.555 57 0 0 52 74 70 1 0 0 1 1 1 3102.9 + 18210 3405 17527 42034 48683 48683 1 SSEMNVLIPTEGGDFNEFPVPEQFK Unmodified 2810.3109 0.31091197 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 7 3.03 2 2 1 89.462 89.462 3;4 2.001E-16 33744 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.033 57.723 59.585 58.222 52.401 97.204 82.274 67.751 56 56 51 94 84 65 3 2 2 3 2 2 26438 18211 1536 17528 42035;42036;42037;42038;42039 48684;48685;48686;48687;48688 48686 5 SSEMNVLVPQDDDYR Unmodified 1766.7781 0.77812849 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 3 0 1 60.934 60.934 3 0.04689 21706 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 32.746 21.163 20.387 0 0 20.767 0 20.254 19 0 0 19 0 19 1 0 0 1 0 1 2488.9 18212 2996 17529 42040 48689 48689 1 SSEMNVLVPQDDDYREFPIPEQFK Unmodified 2882.3433 0.34327473 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 1 5 0 1 79.568 79.568 4 8.395E-05 30000 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.593 29.337 39.468 46.283 0 20.767 0 69.29 37 46 0 19 0 65 1 1 0 1 0 1 5622.5 18213 2996 17530 42041 48690 48690 1 SSENPNEVFR Unmodified 1177.5364 0.53636531 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 6.25 3.96 1 1 1 1 42.397 42.397 2 6.9356E-28 13204 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 155.57 99.194 148.53 97.963 73.891 0 202.83 124.61 139 97 74 0 198 120 2 2 2 0 3 2 29235 18214 1641 17531 42042;42043;42044;42045 48691;48692;48693;48694 48691 4 SSEPEHYCLVR Unmodified 1375.619 0.61904908 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 4 0.816 1 1 1 38.667 38.667 3 0.00020704 10479 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.171 73.373 20.039 37.571 84.129 47.314 37.861 29.848 19 37 84 47 37 28 1 1 3 2 1 1 11032 18215 2629 17532 42046;42047;42048 48695;48696;48697 48697 3 SSEPVQHEENIR Unmodified 1423.6692 0.66917039 3364 Q9Z0U1 Tjp2 Tight junction protein ZO-2 yes yes 0 0 0 0 1.5 0.5 1 1 29.29 29.29 3 4.8113E-05 6422 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.021 64.034 39.701 0 0 29.767 0 39.442 37 0 0 28 0 37 1 0 0 2 0 1 3830.8 18216 3364 17533 42049;42050 48698;48699 48698 2 SSEPVQLTEAETEYFVR Unmodified 1983.9426 0.94255129 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 0 3 0 1 71.893 71.893 3 0.00012923 26773 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.648 36.329 20.267 0 20.087 8.2731 19.494 0 19 0 19 9 19 0 1 0 1 1 1 0 2881.1 18217 3265 17534 42051 48700 48700 1 SSESHSASSDTIEL Unmodified 1448.6267 0.62669646 130 A0A0N4SVB5;Q6PE13 Prrt3 Proline-rich transmembrane protein 3 yes no 0 0 0 0 2 0 1 46.94 46.94 2 0.0051449 14755 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 60.518 52.593 20.292 8.0547 9.1524 0 0 0 19 9 9 0 0 0 1 1 1 0 0 0 2279.7 18218 130 17535 42052 48701 48701 1 SSESSCGLDGDYEDAELNPR Unmodified 2199.8862 0.88623497 2230 Q6PAJ1 Bcr Breakpoint cluster region protein yes yes 0 0 0 0 2 0 1 53.967 53.967 3 1.6857E-08 17967 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.505 65.573 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1756.9 18219 2230 17536 42053 48702 48702 1 SSEVGTDEALDDTQK Unmodified 1593.7006 0.70058968 1225 O54988 Slk STE20-like serine/threonine-protein kinase yes yes 0 0 0 0 1.5 0.5 1 1 48.73 48.73 3 9.2257E-06 14584 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.55 77.214 59.832 27.776 19.534 19.603 0 59.696 56 28 19 19 0 56 2 1 1 1 0 2 12787 18220 1225 17537 42054;42055 48703;48704 48703 2 SSEYHLEDNAAYYLNDLER Unmodified 2301.0186 0.018569775 1255 O70443 Gnaz Guanine nucleotide-binding protein G(z) subunit alpha yes yes 0 0 0 0 3.5 0.5 1 1 68.628 68.628 3 9.8083E-08 24668 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.325 92.061 20.244 48.319 19.365 20.767 19.197 19.706 19 47 19 19 19 19 1 2 1 1 1 1 14776 18221 1255 17538 42056;42057 48705;48706 48706 2 SSFFVNGLTLGGQK Deamidation (N) 1454.7405 0.74054442 1758;652 P62962;Q5SX49;CON__P02584 Pfn1 Profilin-1;Profilin no no 0 1 0 0 10.1 1.79 2 2 2 1 2 77.415 77.415 2;3 6.9227E-11 26032 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.49 91.684 988.94 525.14 721.83 644.8 723.98 809.37 927 529 705 623 732 771 13 7 9 9 9 7 298200 + 18222 1758;652 17539 42058;42059;42060;42061;42062;42063;42064;42065;42066 48707;48708;48709;48710;48711;48712;48713;48714;48715;48716;48717;48718;48719;48720 48710 189 14 SSFFVNGLTLGGQK Unmodified 1453.7565 0.75652884 1758;652 P62962;Q5SX49;CON__P02584 Pfn1 Profilin-1;Profilin no no 0 0 0 0 11.5 1.12 1 1 1 1 75.427 75.427 2;3 3.8436E-11 22925 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.07 93.221 177.15 155.06 317 284.74 236.78 192.39 167 157 306 278 241 185 3 2 3 3 3 2 51404 + 18223 1758;652 17539 42067;42068;42069;42070 48721;48722;48723;48724 48721 4 SSFGPVGLDK Unmodified 1005.5131 0.51311067 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 0 0 0 0 9.33 2.62 1 1 1 60.137 60.137 2;3 0.004456 21025 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.098 33.117 325.46 222.22 295.81 49.219 332.95 198.91 306 231 287 46 327 194 3 2 2 1 3 2 39843 18224 1356 17540 42071;42072;42073 48725;48726;48727 48727 3 SSFGYDPYFSTSYK Acetyl (Protein N-term) 1689.7199 0.71986856 1329 P08551 Nefl Neurofilament light polypeptide yes yes 1 0 0 0 7 2.77 2 2 1 1 80.903 80.903 2;3 1.1872E-06 31197 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.305 61.081 99.135 88.044 125.87 90.021 141.17 152.19 93 83 121 84 140 149 2 2 3 2 4 4 87765 18225 1329 17541 42074;42075;42076;42077;42078;42079 48728;48729;48730;48731;48732;48733 48733 6 SSFLEDK Unmodified 824.3916 0.39159855 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10 3 1 1 53.689 53.689 2 0.03134 16464 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.212 43.71 298.33 291.08 287.9 228.13 382.6 371.78 281 297 293 231 388 359 2 2 2 2 2 2 27562 18226 510 17542 42080;42081 48734;48735 48734 2 SSFSQHAR Unmodified 918.43078 0.43077802 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 6.5 0.5 1 1 22.412 22.412 3 0.00071267 3296 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.19 93.765 29.753 47.346 39.23 48.067 44.927 50.952 28 47 41 46 46 49 1 2 2 1 1 2 4176.2 18227 1580 17543 42082;42083 48736;48737 48736 2 SSGALLPKPQMR Acetyl (Protein N-term) 1325.7126 0.71255553 2893 Q9CPQ1 Cox6c Cytochrome c oxidase subunit 6C yes yes 1 0 0 1 9 0 1 55.803 55.803 2 0.0051052 15895 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.891 7.7431 0 20.216 0 20.767 0 0 0 19 0 19 0 0 0 1 0 1 0 0 2186.5 18228 2893 17545 42084 48738 48738 1 SSGALSVDK Unmodified 862.43961 0.43961137 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 6 0 1 44.495 44.495 2 0.003921 12776 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.496 39.701 142.4 218.54 227.95 207.49 333.16 346.54 134 218 232 208 339 334 1 2 2 2 2 2 10158 18229 1464;860 17546 42085 48739;48740 48740 2 SSGDYSATFLPGLIPAEK Unmodified 1851.9254 0.92544466 179 A0A0R4J0M9;Q8CDG3 Vcpip1 Deubiquitinating protein VCIP135 yes no 0 0 0 0 7 0 1 80.639 80.639 3 0.0068785 28997 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.349 31.407 0 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 2209.6 18230 179 17547 42086 48741 48741 1 SSGGFVWACK Unmodified 1097.4964 0.49641475 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 9 0.816 1 1 1 60.611 60.611 2 5.5602E-05 18195 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.87 71.162 148.05 135.68 69.941 147.76 0 168.43 139 138 74 139 0 158 2 2 1 2 0 1 14524 18231 1618 17548 42087;42088;42089 48742;48743;48744 48743 3 SSGGREDSESPGTQR Unmodified 1548.6764 0.67644061 1858 P97825 Hn1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed yes yes 0 0 0 1 1 0 1 19.522 19.522 3 0.0059646 2950 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.07 30.406 0 5.32 0 5.3767 4.6947 8.394 0 5 0 5 5 8 0 1 0 1 1 1 577.05 18232 1858 17549 42090 48745 48745 1 SSGLESSEAR Unmodified 1021.4676 0.46761704 2838 Q99K28 Arfgap2 ADP-ribosylation factor GTPase-activating protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 29.379 29.379 2 4.5158E-05 7127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.37 69.29 9.657 29.792 0 60.532 55.795 0 9 28 0 56 56 0 1 1 0 1 2 0 4376.7 18233 2838 17550 42091;42092 48746;48747 48746 2 SSGLGSDVGSR Unmodified 1020.4836 0.48360145 2261 Q6ZPE2 Sbf1 Myotubularin-related protein 5 yes yes 0 0 0 0 4.5 0.5 1 1 34.509 34.509 2 0.0053574 8951 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.19 37.463 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 1773.6 18234 2261 17551 42093;42094 48748;48749 48748 2 SSGLPITSAVDLEDAAK Unmodified 1672.8519 0.85194536 3396 Q9Z2I8 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 72.537 72.537 3 1.4317E-06 26560 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.78 79.4 88.143 71.227 93.624 26.993 91.347 106.13 83 74 92 28 92 102 2 2 2 1 2 2 6438.4 18235 3396 17552 42095;42096 48750;48751 48750 2 SSGLSSSLQPAGAK Unmodified 1288.6623 0.6622941 2060 Q5SSM3;F6T1Y2 Arhgap44 Rho GTPase-activating protein 44 yes no 0 0 0 0 7.5 0.5 1 1 48.883 48.883 3 0.0079661 14007 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.457 20.9 68.801 53.043 113.79 62.55 91.089 96.539 65 56 111 65 93 93 1 1 1 1 1 1 4967.1 18236 2060 17553 42097;42098 48752;48753 48752 2 SSGPTSLFAVTVAPPGAR Unmodified 1713.905 0.90498399 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 10.2 2.11 2 1 1 2 70.888 70.888 2;3 5.6505E-55 21023 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 149.57 124.35 89.273 170.42 105.06 137.63 38.702 169.49 84 167 102 130 37 159 2 3 2 4 1 4 68933 18237 2714 17554 42099;42100;42101;42102;42103;42104 48754;48755;48756;48757;48758;48759 48757 6 SSGPWNK Unmodified 774.36605 0.3660525 6 A0A087WNP6;Q4VAA2;A0A087WRM0;F8WGL9;A0A087WS49 Cdv3 Protein CDV3 yes no 0 0 0 0 9 0 1 44.51 44.51 2 0.038508 10650 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.597 29.558 0 0 48.538 27.711 0 59.696 0 0 46 28 0 56 0 0 1 1 0 1 2792.6 18238 6 17555 42105 48760 48760 1 SSGPYGGGGQYFAK Unmodified 1374.6204 0.62042929 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 0 7 0 1 53.412 53.412 3 8.8329E-05 16155 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.879 51.498 99.179 120.99 0 0 142.13 95.082 93 120 0 0 139 93 1 1 0 0 1 1 9883.4 18239 1586 17556 42106 48761 48761 1 SSGPYGGGGQYFAKPR Unmodified 1627.7743 0.77430417 1586 Q5EBP8;P49312 Hnrnpa1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed yes no 0 0 0 1 10.5 2.5 1 1 47.481 47.481 3 4.5203E-17 12815 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.48 112.4 98.993 61.115 166.2 207.51 237.23 124.62 93 65 166 203 240 120 1 1 2 2 2 1 32722 18240 1586 17557 42107;42108 48762;48763 48762 2 SSGSPYGGGYGSGGGSGGYGSR Unmodified 1909.7827 0.7826966 486;626 B2RXM2;J3QNY1;A2AL13;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 8 3.56 1 1 1 39.711 39.711 3 4.0934E-28 11085 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.48 129.29 69.243 37.355 0 40.102 18.032 49.036 66 37 0 37 19 46 3 1 0 1 1 1 27171 18241 626;486 17558 42109;42110;42111 48764;48765;48766 48764 3 SSGTVVLAQCTVEK Unmodified 1477.7446 0.74464352 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 5.5 0.5 1 1 54.593 54.593 2;3 9.3772E-07 17520 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.12 63.862 0 69.462 45.599 27.359 57.319 0 0 66 46 28 56 0 0 2 1 1 2 0 6566.4 18242 3371 17559 42112;42113 48767;48768 48768 2 SSGVALSIAVGLLECTFPNTGAR Unmodified 2319.1893 0.18928069 880 E9Q1S3;Q01405 Sec23a Protein transport protein Sec23A yes no 0 0 0 0 12 0 1 101.61 101.61 3 2.0172E-16 28739 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.603 82.321 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 810.43 18243 880 17560 42114 48769 48769 1 SSGVQPSPAR Unmodified 984.49886 0.49885759 528 F6RK07;A2AUX5;A2AUX3;B7ZD29;Q3UHC7 Dab2ip Disabled homolog 2-interacting protein yes no 0 0 0 0 5 0 1 27.202 27.202 2 0.027955 5166 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.598 27.789 0 0 20.173 8.6347 0 0 0 0 19 9 0 0 0 0 1 1 0 0 592.05 18244 528 17561 42115 48770 48770 1 SSHAHTNNFAK Unmodified 1212.5636 0.56358311 3318 Q9R1V7 Adam23 Disintegrin and metalloproteinase domain-containing protein 23 yes yes 0 0 0 0 7.5 0.5 1 1 26.783 26.783 4 0.0086213 4358 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.284 25.43 99.249 107.16 0 20.255 124.49 33.335 93 107 0 19 121 32 2 2 0 1 2 1 1808.9 18245 3318 17562 42116;42117 48771;48772 48771 2 SSHLENGTR Deamidation (N) 1000.4574 0.4573867 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 1 0 0 3 0 1 21.399 21.399 3 0.025923 3520 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.55 31.656 20.387 0 0 29.902 37.328 0 19 0 0 28 37 0 1 0 0 1 1 0 1655.1 18246 343 17563 42118 48773 48773 94 1 SSHPEDLR Unmodified 939.44101 0.44100836 2632 Q8R0H9;A0A2R8VI72 Gga1 ADP-ribosylation factor-binding protein GGA1 yes no 0 0 0 0 2.5 0.5 1 1 24.475 24.475 3 0.00091484 4868 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 116.9 81.703 89.999 26.4 0 59.607 85.126 0 84 28 0 56 84 0 2 1 0 2 2 0 8555.4 18247 2632 17564 42119;42120 48774;48775 48775 2 SSHQELR Unmodified 855.41988 0.41987898 2311 Q80U35 Arhgef17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 0 4 0 1 17.65 17.65 3 0.0066401 2462 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.206 62.686 6.406 0 5.3777 0 6.276 0 6 0 5 0 6 0 1 0 1 0 1 0 388.85 18248 2311 17565 42121 48776 48776 1 SSHTWVALSHIAGLCNR Unmodified 1907.9424 0.9424489 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7.83 4.88 2 1 1 2 57.638 57.638 3;4 3.2704E-19 13010 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.91 110.42 356.25 237.47 190.13 465.16 293.45 544.57 334 239 187 441 303 516 5 3 4 7 5 6 331280 18249 106 17566 42122;42123;42124;42125;42126;42127 48777;48778;48779;48780;48781;48782;48783 48782 7 SSHYDELLAAEAR Unmodified 1460.6896 0.68957148 2276 Q78PY7;Q3TJ56 Snd1 Staphylococcal nuclease domain-containing protein 1 yes no 0 0 0 0 4 0 1 48.562 48.562 3 0.025156 15664 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.315 25.343 29.856 37.355 0 61.208 0 0 28 37 0 56 0 0 1 1 0 1 0 0 6670 18250 2276 17567 42128 48784 48784 1 SSIAGLLLKPTNEK Unmodified 1469.8453 0.84534384 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 11 0 1 66.454 66.454 3 0.00222 18400 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.754 45.616 0 0 0 481 0 0 0 0 0 481 0 0 0 0 0 1 0 0 24887 18251 3266 17568 42129 48785 48785 1 SSIGLNTWPIIR Unmodified 1355.7561 0.75613491 3297 Q9QZX7 Srr Serine racemase yes yes 0 0 0 0 10.8 1.48 1 1 1 1 74.82 74.82 2 1.0451E-17 22628 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.28 105.21 168.2 219.64 191.23 106.99 64.649 196.43 158 217 190 102 65 186 2 3 3 1 1 2 58804 18252 3297 17569 42130;42131;42132;42133 48786;48787;48788;48789 48787 4 SSIGTGYDLSASTFSPDGR Acetyl (Protein N-term) 1958.8858 0.88576469 1253 O70435;E0CZ34;F8WH02;E0CYL6 Psma3 Proteasome subunit alpha type-3 yes no 1 0 0 0 6.25 3.96 1 1 1 1 74.581 74.581 2 4.2689E-07 27986 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.282 68.967 30.044 9.576 0 9 28.291 58.889 28 9 0 9 28 56 1 1 0 1 1 2 13895 18253 1253 17570 42134;42135;42136;42137 48790;48791;48792;48793 48790 4 SSIIFAGGDK Unmodified 993.51311 0.51311067 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 8 1 1 1 58.989 58.989 2 0.0027265 17440 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.658 37.767 0 115.81 137.49 133.9 0 118.33 0 111 139 130 0 111 0 1 1 1 0 1 7866.3 18254 415 17571 42138;42139 48794;48795 48795 2 SSIIPQDPHEVK Unmodified 1348.6987 0.69867961 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6 0 1 49.125 49.125 3 0.0023864 14919 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.898 32.595 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18255 570 17572 42140 48796 48796 1 SSIIPQDPHEVKR Unmodified 1504.7998 0.79979063 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 1 6.5 0.5 1 1 43.196 43.196 4 0.016282 11364 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.095 23.959 49.176 95.636 0 71.045 0 128.99 46 93 0 65 0 121 1 2 0 1 0 2 6077.2 18256 570 17573 42141;42142 48797;48798 48798 2 SSILLIDK Unmodified 887.53278 0.53278348 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 10 2.16 1 1 1 66.491 66.491 2;3 0.006823 21741 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.825 30.803 168.64 97.042 263.98 29.172 250.84 205.7 158 93 250 28 242 195 2 1 2 1 2 2 27290 18257 894 17574 42143;42144;42145 48799;48800;48801 48799 3 SSILQAESK Unmodified 961.50803 0.50802529 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 0 7 0 1 49.696 49.696 2 0.0014943 14338 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.53 35.344 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18258 2612 17575 42146 48802 48802 1 SSITPGTVLIILTGR Unmodified 1526.9032 0.90319307 1570 P47911;A0A0J9YU32 Rpl6 60S ribosomal protein L6 yes no 0 0 0 0 11 0 1 90.073 90.073 2 0.0044497 28905 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.928 26.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18259 1570 17576 42147 48803 48803 1 SSLAEVQSEIER Unmodified 1346.6678 0.66777341 1140;200;646 A2A542;A2A545;A2A543;A0A0R4J194;Q8R3Z5;A0A0A6YWX5;C7IVS7;Q8CC27;J3QK20;Q8R0S4 Cacnb1;Cacnb2;Cacnb4 Voltage-dependent L-type calcium channel subunit beta-1;Voltage-dependent L-type calcium channel subunit beta-2;Voltage-dependent L-type calcium channel subunit beta-4 no no 0 0 0 0 3.5 0.5 1 1 58.062 58.062 2;3 1.7466E-11 20082 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.03 0 9.51 29.151 0 0 65.874 0 9 28 0 0 65 0 1 1 0 0 2 0 10491 18260 200;646;1140 17577 42148;42149 48804;48805 48805 2 SSLDGPIVLAIEDFHK Unmodified 1739.9094 0.90940066 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 7 0.816 1 1 1 84.386 84.386 3 1.4039E-05 30764 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.197 47.999 69.421 6.0982 49.208 0 47.833 28.483 65 9 46 0 46 28 2 1 1 0 1 2 3015.9 18261 2057 17578 42150;42151;42152 48806;48807;48808;48809 48808 4 SSLEGPTILDIEK Unmodified 1400.7399 0.73987572 2282 Q7TMB8;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 5.5 0.5 1 1 72.365 72.365 3 7.5649E-07 25884 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.565 53.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18262 2282 17579 42153;42154 48810;48811 48811 2 SSLESIPLALLPAAAAGASAGEDTAGAGPR Unmodified 2720.3981 0.3980875 2247 Q6PGF7 Exoc8 Exocyst complex component 8 yes yes 0 0 0 0 7.5 0.5 1 1 88.694 88.694 3 1.2922E-08 32788 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.168 49.778 0 0 0 0 0 18 0 0 0 0 0 18 0 0 0 0 0 2 2253.1 18263 2247 17580 42155;42156 48812;48813 48812 2 SSLIILK Unmodified 772.50584 0.50584045 3400 Q9Z2U1;A0A0G2JF97 Psma5 Proteasome subunit alpha type-5 yes no 0 0 0 0 10 1 1 1 65.335 65.335 2 0.035411 17755 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.958 22.753 0 0 110.36 177 93.636 106.06 0 0 102 177 93 102 0 0 1 1 1 1 47110 18264 3400 17581 42157;42158 48814;48815 48815 2 SSLLDDLLTESEDMAQR Unmodified 1921.8939 0.89388653 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 5 0.816 1 1 1 93.955 93.955 3 8.6416E-43 35149 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 168.1 134.41 8.5472 14.567 25.864 6.0436 17.183 9.3723 8 14 25 6 17 9 1 1 2 1 2 1 7515.6 18265 815;2590 17582 42159;42160;42161 48816;48817;48818 48817 3 SSLLLDTVTSIPSSR Unmodified 1574.8516 0.85155143 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 9.5 2.06 2 1 1 74.129 74.129 2;3 1.3476E-81 24533 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 219.92 173.51 99.601 70.693 82.507 52.404 115.94 177.04 93 69 79 51 116 167 2 2 2 2 3 2 56240 18266 510 17583 42162;42163;42164;42165 48819;48820;48821;48822 48821 4 SSLPGVR Unmodified 714.40244 0.40243801 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 8.5 2.69 1 1 1 1 39.09 39.09 2 0.024948 9587 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.21 48.912 305.6 186.72 554.76 133.7 438.25 339.73 287 178 530 130 436 326 2 1 3 1 3 2 55637 18267 144 17584 42166;42167;42168;42169 48823;48824;48825;48826 48824 4 SSLPNFK Unmodified 791.41775 0.41775372 2225 Q6P8X1;A0A1W2P6Y0 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 9 0 1 54.412 54.412 3 0.035143 15216 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.441 40.002 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18268 2225 17585 42170 48827 48827 1 SSLSGEEVDSK Unmodified 1136.5197 0.51971219 3178 Q9ER72 Cars Cysteine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 4 0 1 43.716 43.716 3 0.00035306 13270 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.781 47.183 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18269 3178 17586 42171 48828 48828 1 SSLSSAQADFNQLAELDR Deamidation (N) 1951.9123 0.91231379 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 3 0 1 66.756 66.756 3 5.1481E-07 24316 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.07 81.282 20.387 0 0 9.837 0 20.254 19 0 0 9 0 19 1 0 0 1 0 1 2787.5 18270 551 17587 42172 48829 48829 156 1 SSLSSAQADFNQLAELDR Unmodified 1950.9283 0.92829821 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 6.33 3.09 2 1 2 1 73.368 73.368 2;3 3.1839E-79 27466 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 200.48 176.44 153.41 100.19 109.44 171.79 54.518 107.18 144 102 111 162 56 102 4 2 3 4 2 3 191680 18271 551 17587 42173;42174;42175;42176;42177;42178 48830;48831;48832;48833;48834;48835;48836 48836 7 SSLSYFGGVCSR Unmodified 1318.5976 0.59758535 3318 Q9R1V7 Adam23 Disintegrin and metalloproteinase domain-containing protein 23 yes yes 0 0 0 0 9 0 1 57.478 57.478 2 0.0010165 16713 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.474 51.32 88.694 0 61.276 71.765 0 0 83 0 60 69 0 0 1 0 1 1 0 0 5601.2 18272 3318 17588 42179 48837 48837 1 SSLTSTVFTTGGR Unmodified 1312.6623 0.6622941 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 9.14 3.68 1 1 1 1 1 1 1 56.03 56.03 2 7.2753E-87 14240 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 195.8 154.35 218.88 102.77 176.81 156.76 281.54 202.55 205 103 167 148 279 195 5 3 3 4 5 4 82957 18273 2479 17589 42180;42181;42182;42183;42184;42185;42186 48838;48839;48840;48841;48842;48843;48844;48845 48842 8 SSLVITTK Unmodified 847.50148 0.50148335 802 Q3UPV6;E0CXZ9;P62482;E0CXI4;P63143 Kcnab2;Kcnab1 Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1 yes no 0 0 0 0 9 0.816 1 1 1 52.781 52.781 2;3 2.3119E-06 14397 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.99 111.3 197.68 232.92 35.921 172.69 67.99 207.87 185 232 37 158 65 195 1 2 1 1 1 1 21502 18274 802 17590 42187;42188;42189 48846;48847;48848 48847 3 SSLVTSK Unmodified 720.40177 0.4017693 1678 P60840 Ensa Alpha-endosulfine yes yes 0 0 0 0 8.5 0.5 1 1 42.805 42.805 2 0.017956 10533 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.86 34.552 310.45 141.94 0 258.84 242.92 404.54 290 139 0 241 253 386 2 1 0 1 1 2 32682 18275 1678 17591 42190;42191 48849;48850 48849 2 SSMLFDTMQHHLALNR Unmodified 1899.9084 0.90837158 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 9 0 1 61.516 61.516 4 0.010889 18637 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 40.237 21.405 109.04 80.96 0 0 0 99.138 102 83 0 0 0 93 1 1 0 0 0 1 6521.4 18276 1382 17592 42192 48851 48851 1 SSMMPGFFSDVNPLSAVSSVVNK Unmodified 2399.1501 0.150118 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 10 0 1 98.466 98.466 4 0.0054592 32201 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.405 19.315 39.613 17.545 0 29.902 37.328 0 37 19 0 28 37 0 1 1 0 1 1 0 1256 18277 3285 17593 42193 48852 48852 1 SSMNPEYDYLFK Acetyl (Protein N-term) 1534.665 0.66499622 1742 P62821 Rab1A Ras-related protein Rab-1A yes yes 1 0 0 0 5 0 1 83.57 83.57 2 3.3065E-06 31774 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.721 35.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18278 1742 17594 42194 48853 48853 1 SSMSVTSLEDELQASIQR Unmodified 1979.947 0.94698474 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 4.5 0.5 1 1 80.855 80.855 3 7.7511E-08 30428 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.585 61.008 0 29.483 18.504 49.911 18.987 0 0 28 19 47 19 0 0 2 1 2 1 0 5592.7 18279 2832 17595 42195;42196 48854;48855 48854 2 SSMTQNLR Acetyl (Protein N-term) 977.46003 0.46002924 2939 Q9CQR4 Acot13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 1 0 0 0 2.5 0.5 1 1 41.835 41.835 2 0.0041852 12820 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.43 92.208 14.904 43.055 37.595 53.502 0 0 14 42 37 51 0 0 1 2 1 2 0 0 21300 18280 2939 17596 42197;42198 48856;48857 48857 2 SSNECFK Acetyl (Protein N-term) 912.36473 0.36473187 136 A0A0N4SVS6;P53996 Cnbp Cellular nucleic acid-binding protein yes no 1 0 0 0 4 0 1 44.034 44.034 2 0.042872 13425 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.504 36.599 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18281 136 17597 42199 48858 48858 1 SSNPGESSR Unmodified 919.39954 0.39953747 3144 Q9DCJ1 Mlst8 Target of rapamycin complex subunit LST8 yes yes 0 0 0 0 2.5 0.5 1 1 17.36 17.36 2 2.7894E-06 2503 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 158.85 113.89 4.1827 12.354 7.8937 0 9.414 9 4 12 8 0 9 9 1 1 1 0 1 1 3418.4 18282 3144 17598 42200;42201 48859;48860 48860 2 SSNPPAR Unmodified 727.3613 0.36130147 2377 Q8BGD9 Eif4b Eukaryotic translation initiation factor 4B yes yes 0 0 0 0 4 0.816 1 1 1 18.529 18.529 2 0.024547 2676 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.69 0 5.286 12.258 21.204 12.4 8.8959 5.0762 5 12 21 12 9 5 1 2 2 2 1 1 6223.8 18283 2377 17599 42202;42203;42204 48861;48862;48863 48861 3 SSNTYTLTDVR Unmodified 1255.6044 0.60444487 897 E9Q4G8;E9Q3Q6;Q61490 Alcam CD166 antigen yes no 0 0 0 0 8 3.56 1 1 1 46.612 46.612 2 2.0627E-13 14506 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.66 112.64 39.234 55.997 56.291 56.825 131.12 65.548 37 56 56 56 130 65 1 2 1 1 2 2 9083.7 18284 897 17600 42205;42206;42207 48864;48865;48866 48864 3 SSNVLSEDQDSYLCNVTLFR Unmodified 2346.0798 0.079789824 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 8 3.56 1 1 1 78.619 78.619 3 4.3107E-39 28842 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 150.23 132.86 88.375 91.96 66.554 49.616 66.702 50.102 83 92 65 47 65 47 3 2 2 2 2 2 37373 18285 3376 17601 42208;42209;42210 48867;48868;48869;48870;48871 48870 5 SSPADLVTVTDQK Unmodified 1359.6882 0.6881745 2819 Q924B0;O55023;Q80ZJ2;A0A0A6YW07;D3Z703 Impa1 Inositol monophosphatase 1 yes no 0 0 0 0 5.67 0.471 1 2 59.901 59.901 2;3 9.7825E-05 20723 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.731 57.322 148.03 100.17 102.12 108.35 140.21 58.081 139 102 102 102 139 56 3 2 2 2 2 1 28879 18286 2819 17602 42211;42212;42213 48872;48873;48874 48872 3 SSPANTCSPEVIHLK Unmodified 1638.8036 0.80355538 2200 Q6NS52;Q3TSN3 Dgkb Diacylglycerol kinase beta yes no 0 0 0 0 6 0 1 50.66 50.66 3 0.00083011 15670 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.288 27.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18287 2200 17603 42214 48875 48875 1 SSPCIHYFTGTPDPSR Unmodified 1820.8152 0.8151827 3001 Q9CZC8;A0A0N4SWD0 Scrn1 Secernin-1 yes no 0 0 0 0 6 0 1 49.912 49.912 3 0.0037759 15300 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.904 37.466 59.359 83.443 51.856 77.009 41.581 87.291 56 83 56 74 46 83 1 1 1 1 1 1 6722.7 18288 3001 17604 42215 48876 48876 1 SSPDLTGVVHIYEELK Unmodified 1785.9149 0.91487997 2058 Q5SRX1;Q5SXA5 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 8.33 3.3 2 1 80.27 80.27 3;4 1.4007E-05 29580 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.531 54.391 39.302 36.109 36.403 28.434 0 29.848 37 37 37 28 0 28 1 1 1 1 0 1 3064 18289 2058 17605 42216;42217;42218 48877;48878;48879 48877 3 SSPDLTGVVHIYEELKR Unmodified 1942.016 0.015991 2058 Q5SRX1;Q5SXA5 Tom1l2 TOM1-like protein 2 yes no 0 0 0 1 7.5 0.5 1 1 75.377 75.377 4 0.00091746 26502 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.343 37.7 59.092 82.702 97.256 73.16 102.35 28.534 56 83 93 74 102 28 2 2 1 2 2 1 7978.3 18290 2058 17606 42219;42220 48880;48881 48880 2 SSPEPVALTESETEYVIR Unmodified 2005.9844 0.9844161 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 2.5 0.5 1 1 68.159 68.159 3 4.9918E-07 24957 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 88.19 69.825 20.207 0 30.194 0 0 0 19 0 28 0 0 0 1 0 1 0 0 0 4350.9 18291 3291 17607 42221;42222 48882;48883 48883 2 SSPLIQFNLLHSK Unmodified 1482.8195 0.81946344 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 10.8 0.829 2 1 1 68.566 68.566 3;4 1.2373E-14 19895 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.93 89.303 406.67 338.19 112.61 400.78 359.27 439.6 381 341 111 379 368 422 3 3 2 3 1 2 77546 18292 1401 17608 42223;42224;42225;42226 48884;48885;48886;48887 48885 4 SSPPGHYTQKPK Unmodified 1325.6728 0.67279921 2965 Q9CRD0;A0A0J9YUB6 Ociad1 OCIA domain-containing protein 1 yes no 0 0 0 1 9 0 1 32.945 32.945 4 0.019863 5917 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.764 31.755 24.532 0 24.762 0 0 39.442 23 0 23 0 0 37 1 0 1 0 0 1 901.65 18293 2965 17609 42227 48888 48888 1 SSPPVQFSLLHSK Unmodified 1425.7616 0.76161421 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 8 0 1 59.227 59.227 3 8.6874E-05 18249 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.063 60.835 0 77.362 82.218 66.145 0 118.33 0 74 83 65 0 111 0 1 1 1 0 1 7046.6 18294 1400 17610 42228 48889 48889 1 SSPQFGVTLVTYELLQR Unmodified 1937.0258 0.025827405 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 8.5 0.5 1 1 87.319 87.319 3 1.0661E-06 30666 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.87 87.55 20.147 77.377 0 60.866 18.172 9.0754 19 74 0 56 19 9 1 2 0 2 1 1 9711.4 18295 2396 17611 42229;42230 48890;48891;48892 48892 3 SSPSFSSLHYQDAGNYVCETALQEVEGLK Unmodified 3215.4717 0.47172272 897 E9Q4G8;E9Q3Q6;Q61490;F6QH25 Alcam CD166 antigen yes no 0 0 0 0 5 0 1 82.068 82.068 4 2.6505E-05 31152 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.732 26.085 0 0 19.261 29.107 18.537 0 0 0 19 28 19 0 0 0 1 1 1 0 1824.5 18296 897 17612 42231 48893 48893 1 SSPSPQKR Unmodified 885.46683 0.46682918 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 1 7 0 1 24.193 24.193 3 0.052455 3574 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.878 31.835 0 15.96 0 20.314 24.106 32.358 0 15 0 19 25 31 0 1 0 1 1 1 1224.2 18297 1220 17613 42232 48894 48894 1 SSPTDKHTLVK Unmodified 1211.651 0.65100113 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 1 7.5 0.5 1 1 38.773 38.773 4 0.0017389 8573 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.395 30.674 336.67 161.57 446.68 307.15 327.27 506.61 317 167 436 311 343 484 2 1 2 2 2 2 31811 18298 1096;1042;487;928 17614 42233;42234 48895;48896 48896 2 SSPTIPSR Acetyl (Protein N-term) 885.4556 0.45559579 2644 Q8R1I1 Uqcr10 Cytochrome b-c1 complex subunit 9 yes yes 1 0 0 0 2 1 1 1 38.615 38.615 2 0.0094655 11403 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.568 78.909 0 19 29.025 28.525 18.564 0 0 19 28 28 19 0 0 1 1 1 1 0 20970 18299 2644 17615 42235;42236 48897;48898 48898 2 SSPTIPSR Unmodified 843.44503 0.4450311 2644 Q8R1I1 Uqcr10 Cytochrome b-c1 complex subunit 9 yes yes 0 0 0 0 13 0 1 34.782 34.782 2 0.0039385 8934 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.62 65.117 69.745 0 0 99.048 138.27 74.938 65 0 0 93 139 74 1 0 0 1 1 1 8656.8 18300 2644 17615 42237 48899 48899 1 SSPWNFAFTVK Unmodified 1282.6346 0.63462279 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 11.2 1.17 2 1 1 1 78.978 78.978 2;3 1.3887E-07 24076 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.66 62.634 30.044 77.844 92.164 249.09 117.3 47.517 28 74 93 242 121 46 1 1 2 4 3 1 55923 18301 526 17616 42238;42239;42240;42241;42242 48900;48901;48902;48903;48904 48902 5 SSPYPTDVAR Unmodified 1091.5247 0.52473799 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 7 3.54 1 1 1 1 40.814 40.814 2 2.1185E-16 11601 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 179.36 102.04 416.25 86.978 119.33 135.93 424.89 451.59 389 93 120 134 427 435 4 1 1 2 4 4 62391 18302 628;2074 17617 42243;42244;42245;42246 48905;48906;48907;48908 48906 4 SSQEEVR Unmodified 833.38791 0.38791015 3401 Q9Z2X1;J3QMT0;J3QM80 Hnrnpf Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed yes no 0 0 0 0 13 0 1 21.63 21.63 2 0.044814 3178 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.923 48.546 0 0 9.4222 7.0894 0 9.594 0 0 9 7 0 9 0 0 1 1 0 1 626.44 18303 3401 17618 42247 48909 48909 1 SSQGLEQQVAITR Unmodified 1415.7369 0.73685603 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 4.5 0.5 1 1 47.492 47.492 2;3 0.00012082 14736 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.853 55.113 69.42 64.479 0 70.041 53.361 58.173 65 65 0 65 56 56 2 2 0 1 1 1 8928.4 18304 628 17619 42248;42249 48910;48911 48911 2 SSQIGAVVSR Unmodified 1002.5458 0.54580778 2765 Q91XF0 Pnpo Pyridoxine-5'-phosphate oxidase yes yes 0 0 0 0 6 0 1 41.611 41.611 2 0.0027678 11405 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.479 47.135 0 0 0 40.441 0 49.036 0 0 0 37 0 46 0 0 0 1 0 1 6272.5 18305 2765 17620 42250 48912 48912 1 SSQPLASK Unmodified 816.43413 0.43413207 408 A0A338P6G6;Q3TE85;A0A338P6E8;P17095;A0A338P6F6;A0A338P6D0 Hmga1 High mobility group protein HMG-I/HMG-Y yes no 0 0 0 0 7 0 1 38.248 38.248 2 0.017052 9017 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.688 18.726 39.468 46.283 0 39.019 75.612 0 37 46 0 37 74 0 1 1 0 1 1 0 2314.9 18306 408 17621 42251 48913 48913 1 SSQPPSHSSTK Unmodified 1141.5364 0.53636531 1912 Q3TBU7;Q3U2K8;Q80WC7 Agfg2 Arf-GAP domain and FG repeat-containing protein 2 yes no 0 0 0 0 6 0 1 22.994 22.994 3 0.036459 3452 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.544 27.788 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18307 1912 17622 42252 48914 48914 1 SSQSLPSDSSPQLQQEQPTG Unmodified 2099.9607 0.96072055 927 E9Q7S0;F7BQW7;F7CD11 Synj1 yes no 0 0 0 0 2.5 0.5 1 1 52.17 52.17 3 8.6874E-07 17683 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.362 46.848 89.961 68.236 84.053 55.849 18.563 20.254 84 65 84 56 19 19 2 1 2 2 1 1 20247 18308 927 17623 42253;42254 48915;48916;48917 48917 3 SSSAMASANLADEPAPDVEAEDGR Unmodified 2389.034 0.033961843 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 2 0 1 56.145 56.145 3 4.0188E-10 18999 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 65.197 56.139 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2710.1 18309 2226 17624 42255 48918 48918 1 SSSAPVASPNVR Unmodified 1170.5993 0.59929991 974 G5E8R3;E9QPD7;Q05920;A0A286YCC5 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 5 0.816 1 1 1 35.838 35.838 2 1.5054E-06 9103 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.9 65.911 9 0 19.685 19.594 0 0 9 0 19 19 0 0 1 0 1 1 0 0 2360.6 18310 974 17625 42256;42257;42258 48919;48920;48921 48920 3 SSSEEVLER Unmodified 1034.488 0.48801813 2429 Q8BLV3;A0A286YD31 Slc9a7 Sodium/hydrogen exchanger 7 yes no 0 0 0 0 1 0 1 36.984 36.984 2 0.0052286 9832 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.213 39.766 39.516 36.703 0 0 56.948 47.411 37 37 0 0 56 46 1 1 0 0 1 1 7653.4 18311 2429 17626 42259 48922 48922 1 SSSEGHLR Unmodified 871.41479 0.41479361 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 4 0.816 1 1 1 18.558 18.558 3 0.00052326 2593 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.02 59.04 20.263 13.208 19.263 8.9927 28 20.254 19 14 19 9 28 19 1 2 2 1 1 2 4551.7 18312 3285 17627 42260;42261;42262 48923;48924;48925 48924 3 SSSEPSR Unmodified 748.33515 0.3351463 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 2 0 1 16.869 16.869 2 0.011197 2628 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.49 61.706 9.5346 15.188 7.6967 0 15.082 17.692 9 15 8 0 15 17 1 1 1 0 1 1 1935.2 18313 107 17628 42263 48926 48926 1 SSSEQELR Unmodified 934.43559 0.43558863 3225 Q9JK48 Sh3glb1 Endophilin-B1 yes yes 0 0 0 0 2 0 1 27.433 27.433 2 0.035267 5974 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.628 14.123 0 38.437 55.707 57.888 0 0 0 37 56 56 0 0 0 1 1 1 0 0 5362.8 18314 3225 17629 42264 48927 48927 1 SSSGLLEWDSK Unmodified 1207.5721 0.57208211 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 8 3.56 1 1 1 65.17 65.17 3 1.9682E-06 23363 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.363 63.987 108.85 27.124 76.834 104.49 128.23 85.871 102 28 74 102 130 83 2 1 1 2 2 1 13998 18315 1110 17630 42265;42266;42267 48928;48929;48930 48930 3 SSSLGNSPDR Unmodified 1018.468 0.46795139 2603 Q8K341;F6RPX5 Atat1 Alpha-tubulin N-acetyltransferase 1 yes no 0 0 0 0 4 0 1 28.867 28.867 2 0.017709 6373 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.153 26.154 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18316 2603 17631 42268 48931 48931 1 SSSLLIPPLEAALANFSK Unmodified 1857.0248 0.024764773 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 9.42 3.97 2 2 1 3 2 2 99.669 99.669 2;3;4 3.6424E-53 32546 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 163.44 142.2 567.39 654 502.79 324.9 273.63 889.54 538 635 489 302 268 842 14 10 13 9 8 18 221770 18317 1223 17632 42269;42270;42271;42272;42273;42274;42275;42276;42277;42278;42279;42280 48932;48933;48934;48935;48936;48937;48938;48939;48940;48941;48942;48943;48944;48945;48946;48947;48948;48949;48950;48951;48952;48953;48954;48955;48956;48957;48958 48942 27 SSSLLIPPLEAALANFSK Deamidation (N) 1858.0088 0.0087803574 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 1 0 0 8 0 1 96.832 96.832 3 0.00082768 34779 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.566 25.131 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2319.2 18318 1223 17632 42281 48959 48959 333 1 SSSLPSYGR Unmodified 952.46141 0.46140945 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 6.5 0.5 1 1 40.348 40.348 2 0.00094231 10878 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.12 65.155 324.74 140.83 304.7 147.48 184.39 300.68 305 149 297 148 185 287 3 2 3 2 2 3 14791 18319 3344 17633 42282;42283 48960;48961;48962 48961 3 SSSLVNLWK Unmodified 1032.5604 0.56039521 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 10 0 1 69.821 69.821 3 0.00078823 20407 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.177 50.449 0 47.49 86.957 0 58.576 0 0 46 83 0 56 0 0 1 1 0 1 0 4822.6 18320 2012 17634 42284 48963 48963 1 SSSNTCVR Unmodified 909.39743 0.39742898 595 B1AV75;Q3UJP5 2610301B20Rik Protein C8orf37 homolog yes no 0 0 0 0 4 0 1 20.164 20.164 2 0.010536 2942 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.095 23.378 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 0 703.23 18321 595 17635 42285 48964 48964 1 SSSNVNGGPELDR Deamidation (N) 1331.5953 0.59533675 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6;A0A0A6YX33 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 1 0 0 2 0 1 38.389 38.389 3 0.0014967 11054 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.095 42.752 29.923 0 20.407 0 19.874 0 28 0 19 0 19 0 1 0 1 0 1 0 2702.9 18322 67 17636 42286 48965 48965 20 1 SSSPVNVK Acetyl (Protein N-term) 858.4447 0.44469675 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 1 0 0 0 4.5 0.5 1 1 45.687 45.687 2 0.012574 13874 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.981 44.206 197.37 190.66 210.19 164.64 285.14 248.77 186 195 204 167 288 241 2 2 1 2 2 2 28425 18323 2714 17637 42287;42288 48966;48967 48967 2 SSSQIPEGFGLTSGGSNYSLAR Unmodified 2214.0553 0.055289633 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 6 0 1 67.083 67.083 3 0.0018514 23363 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.39 31.015 39.333 26.482 39.329 0 37.714 28.772 37 28 38 0 37 28 1 1 1 0 1 1 4218.4 18324 2790 17638 42289 48968 48968 1 SSSRPVALVTGANK Acetyl (Protein N-term) 1427.7732 0.77324153 1582 P48758;A0A338P684 Cbr1 Carbonyl reductase [NADPH] 1 yes no 1 0 0 1 7 0 1 49.453 49.453 2 0.00055004 14233 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.188 16.02 0 20.216 0 20.767 0 50.102 0 19 0 19 0 47 0 1 0 1 0 1 3651.6 18325 1582 17639 42290 48969 48969 1 SSSSAVEDQK Unmodified 1036.4673 0.46728269 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 3.5 0.5 1 1 33.346 33.346 2;3 0.0016452 8337 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.893 39.15 39.366 113.51 0 49.072 64.115 47.206 37 112 0 46 65 46 1 2 0 1 1 1 6181.6 18326 1275 17640 42291;42292 48970;48971 48971 2 SSSSAVEDQKR Unmodified 1192.5684 0.56839372 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 5 0 1 28.429 28.429 3 0.034468 5741 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.188 23.335 0 48.204 44.271 58.569 0 20.254 0 46 46 56 0 19 0 1 1 1 0 1 1715.2 18327 1275 17641 42293 48972 48972 1 SSSVDTAR Unmodified 821.38791 0.38791015 582 B1AS06;Q6PFD5 Dlgap3 Disks large-associated protein 3 yes no 0 0 0 0 4 0 1 23.019 23.019 2 0.043135 3965 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.429 34.494 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1318.9 18328 582 17642 42294 48973 48973 1 SSSVGSSSSYPISSAGPR Unmodified 1711.8013 0.80130678 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 44.394 44.394 3 0.0057783 13359 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.968 24.83 29.865 0 30.145 0 48.116 0 28 0 28 0 46 0 1 0 1 0 1 0 4721.3 18329 3266 17643 42295 48974 48974 1 SSSWGSTEQLKEIAK Unmodified 1649.8261 0.82606496 1959 Q3U3E2 Fam117b Protein FAM117B yes yes 0 0 0 1 11 0 1 99.469 99.469 3 0.0075621 32820 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 50.088 7.3033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9322.7 18330 1959 17645 42296 48975 48975 1 SSTEQSGEAQGEAAK Unmodified 1478.6485 0.64849453 1779 P63248 Pkia cAMP-dependent protein kinase inhibitor alpha yes yes 0 0 0 0 2 0 1 32.232 32.232 3 1.0821E-12 8114 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.45 64.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18331 1779 17646 42297 48976 48976 1 SSTIQDQQLFDR Unmodified 1436.6896 0.68957148 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 4.5 0.5 1 1 53.35 53.35 2;3 3.664E-05 17523 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.803 67.431 60.088 29.792 0 30.604 27.631 48.248 56 28 0 28 28 46 1 1 0 1 1 1 10890 18332 2674 17647 42298;42299 48977;48978 48978 2 SSTLSPTDFDSLEIQGQYSDINNR Acetyl (Protein N-term);Deamidation (N) 2729.2304 0.23041304 2186 Q68FG2 Sptbn2 yes yes 1 1 0 0 2 0 1 84.981 84.981 3 9.0627E-09 28879 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 41.76 33.265 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18333 2186 17648 42300 48979 48979 879 1 SSTLSPTDFDSLEIQGQYSDINNR Acetyl (Protein N-term) 2728.2464 0.24639746 2186 Q68FG2 Sptbn2 yes yes 1 0 0 0 4 0 1 83.437 83.437 3 2.9178E-05 31581 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.041 33.651 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 3017.3 18334 2186 17648 42301 48980 48980 1 SSTNVEEAFFTLAR Unmodified 1570.7627 0.76273643 1685 P61028 Rab8b Ras-related protein Rab-8B yes yes 0 0 0 0 6.5 0.5 1 1 77.615 77.615 3 9.5783E-05 28379 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.265 71.838 0 38.915 27.108 28.151 0 29.848 0 37 28 28 0 28 0 1 1 2 0 1 6142.8 18335 1685 17649 42302;42303 48981;48982 48981 2 SSTPEEVK Unmodified 875.42363 0.42362696 1410 P18760;F8WGL3 Cfl1 Cofilin-1 yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 36.551 36.551 2;3 0.0012692 9480 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.89 83.736 680.8 905.65 611.79 758.73 762.97 682.4 640 913 615 740 782 652 6 6 4 6 6 4 230060 18336 1410 17650 42304;42305;42306;42307;42308;42309 48983;48984;48985;48986;48987;48988;48989;48990 48988 8 SSTPSPER Unmodified 859.40356 0.40356022 2475 Q8BX70 Vps13c Vacuolar protein sorting-associated protein 13C yes yes 0 0 0 0 3 0 1 23.567 23.567 2 0.064012 4449 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.716 15.47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18337 2475 17651 42310 48991 48991 1 SSTQEEIK Unmodified 920.44509 0.44509068 1549 P45591;A0A1Y7VJ71 Cfl2 Cofilin-2 yes no 0 0 0 0 4 0.816 1 1 1 36.7 36.7 2 0.016355 9981 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.95 20.978 99.29 65.761 45.214 106.36 129.47 86.632 93 65 46 102 130 83 2 2 1 2 2 2 11269 18338 1549 17652 42311;42312;42313 48992;48993;48994 48993 3 SSTSQPDPR Unmodified 973.44649 0.44648767 2681 Q8VCD6 Reep2 Receptor expression-enhancing protein 2 yes yes 0 0 0 0 3 0.816 1 1 1 22.942 22.942 2 0.00037787 4214 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.12 52.783 0 38.881 38.112 0 0 14.924 0 37 37 0 0 14 0 2 2 0 0 1 4720.4 18339 2681 17653 42314;42315;42316 48995;48996;48997 48996 3 SSTSQTVSTPAPEPVIDSTEAIEAK Unmodified 2544.2443 0.24427219 1009 F6ZDS4;Q7M739 Tpr Nucleoprotein TPR yes no 0 0 0 0 3 0 1 66.44 66.44 4 0.0030323 24196 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 34.715 14.64 29.925 0 20.038 8.2888 18.816 19.717 28 0 19 9 19 19 1 0 1 1 1 1 2682.6 18340 1009 17654 42317 48998 48998 1 SSVASPR Unmodified 702.36605 0.3660525 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 5 0 1 24.786 24.786 2 0.007051 4208 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130 25.237 117.73 147.77 105.22 121.69 170.18 242.46 111 148 111 120 176 232 1 1 1 1 1 1 12637 18341 1424 17655 42318 48999 48999 1 SSVETQPAEEVR Unmodified 1330.6365 0.63647328 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 2 0.816 1 1 1 37.307 37.307 2 8.7826E-21 9897 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 159.94 104.57 49.785 37.723 154.7 89.808 139.31 57.035 47 37 149 93 139 56 2 1 3 3 3 2 43081 18342 1250 17656 42319;42320;42321 49000;49001;49002 49000 3 SSVETQPAEEVRK Unmodified 1458.7314 0.7314363 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 1 13 0 1 38.224 38.224 3 0.038845 10581 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.79 19.163 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18343 1250 17657 42322 49003 49003 1 SSVEVGDTR Unmodified 948.45124 0.45123869 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 0 0 0 3.5 0.5 1 1 32.888 32.888 2 4.9936E-12 8185 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.88 86.453 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18344 1435 17658 42323;42324 49004;49005 49005 2 SSVLENFVGR Deamidation (N) 1107.556 0.55603812 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;D6RH60;G3UY64;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054 Dnm1;Dnm2;Dnm3 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 1 0 0 6 0 1 61.361 61.361 2 0.0082282 20693 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 95.775 44.897 68.854 93.126 70.778 75.322 71.305 76.849 65 93 74 74 74 74 1 1 1 1 1 1 7541.3 18345 118;1534;960;1082 17659 42325 49006 49006 56 1 SSVLENFVGR Unmodified 1106.572 0.57202253 118;1534;960;1082 A0A0J9YUN4;A0A0J9YUE9;D6RH60;G3UY64;P39053;E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054 Dnm1;Dnm2;Dnm3 Dynamin-1;Dynamin-3;Dynamin-2 no no 0 0 0 0 9.25 2.28 1 1 1 1 63.804 63.804 2 3.9429E-38 20432 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 204.86 114.56 2381 2068.1 2573.8 2076.9 1914.8 2563.5 2243 2135 2590 2043 2006 2456 4 4 4 3 3 3 445110 18346 118;1534;960;1082 17659 42326;42327;42328;42329 49007;49008;49009;49010 49008 4 SSVLESLVGR Unmodified 1045.5768 0.57677356 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 0 9 0 1 67.002 67.002 2 0.007592 21127 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.056 36.63 304.55 229.59 376.73 404.87 118.43 313.4 287 241 379 393 120 294 2 2 2 2 1 1 43732 18347 815;2590 17660 42330 49011;49012 49011 2 SSVNLLMANLESMPVSK Unmodified 1818.922 0.92195596 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 10 0 1 84.788 84.788 3 0.055972 27041 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 29.818 6.3621 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18348 2301;365 17661 42331 49013 49013 1 SSVPENHAQSR Unmodified 1210.5691 0.56906242 2455 Q8BTI8 Srrm2 Serine/arginine repetitive matrix protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 20.433 20.433 3 3.3154E-08 3013 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.37 71.181 15.022 0 0 5 18.828 0 14 0 0 5 18 0 1 0 0 1 1 0 1812 18349 2455 17662 42332;42333 49014;49015 49015 2 SSVPGVR Unmodified 700.38679 0.38678794 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 6 0 1 33.704 33.704 2 0.058024 7623 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.415 36.77 108.28 89.647 119.83 91.787 144.62 173.9 102 93 120 93 148 167 1 1 1 1 1 1 19129 18350 1423 17663 42334 49016 49016 1 SSVPTITPECR Unmodified 1245.6023 0.60233638 1386 P16014 Chgb Secretogranin-1;CCB peptide;PE-11 yes yes 0 0 0 0 5 0 1 46.62 46.62 2 0.017556 14349 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.202 22.776 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18351 1386 17664 42335 49017 49017 1 SSVQEFMTFTSQLIVER Unmodified 2000.9877 0.98772734 2945 Q9CQW1 Ykt6 Synaptobrevin homolog YKT6 yes yes 0 0 0 0 9.5 0.5 1 1 95.465 95.465 3 0.00018237 31129 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.158 46.109 9.5359 14.113 8.3904 29.163 14.177 0 9 14 9 29 14 0 1 1 1 2 1 0 3778.8 18352 2945 17665 42336;42337 49018;49019 49019 2 SSVSDYGNYDIIVR Unmodified 1586.7577 0.75765105 1156 O08530 S1pr1 Sphingosine 1-phosphate receptor 1 yes yes 0 0 0 0 5 0 1 63.201 63.201 3 0.0013397 22254 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.414 26.976 0 29.792 0 0 49.162 0 0 28 0 0 47 0 0 1 0 0 1 0 2212.7 18353 1156 17666 42338 49020 49020 1 SSVSGVVATVFGATGFLGR Unmodified 1810.9577 0.95774784 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 5 5.66 2 1 95.177 95.177 3 2.0889E-07 37572 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.301 49.463 6.3538 26.017 18.974 18.764 28.377 5.0663 6 25 18 18 28 5 1 2 2 2 2 1 4640.9 18354 141 17667 42339;42340;42341 49021;49022;49023;49024 49024 4 SSVVGGFVSHYLLEK Unmodified 1620.8512 0.8511575 831 E9Q175;E9Q3L1;E9PVU0;E9Q174;V9GXM4;V9GX76;Q64331 Myo6 Unconventional myosin-VI yes no 0 0 0 0 10 0 1 75.805 75.805 3 0.010584 23027 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.838 23.735 39.527 59.584 29.279 108.28 77.49 126.77 37 56 28 102 83 121 1 1 1 2 2 2 3470.1 18355 831 17668 42342 49025;49026 49025 2 SSVVTAVK Unmodified 789.45962 0.45961853 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 45.812 45.812 2 0.0042012 11991 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.27 63.264 355.06 134.64 444.67 386.52 174.31 291.37 334 139 436 371 176 278 4 2 4 3 2 3 40431 18356 2264 17669 42343;42344;42345;42346 49027;49028;49029;49030 49028 4 SSWVMTCAYAPSGNFVACGGLDNICSIYSLK Unmodified 3427.5345 0.53453945 1751 P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 0 10.8 1.47 1 2 1 1 92.747 92.747 4;5 2.0622E-06 30138 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.492 40.522 30.044 0 86.034 20.522 13.018 109.43 28 0 83 19 14 103 1 0 2 1 1 3 23084 18357 1751 17670 42347;42348;42349;42350;42351 49031;49032;49033;49034;49035 49032 5 SSWVMTCAYAPSGNYVACGGLDNICSIYNLK Unmodified 3470.5404 0.54035311 1750;1485 P29387;P62874;H3BKR2 Gnb4;Gnb1 Guanine nucleotide-binding protein subunit beta-4;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 0 7 3.54 1 1 1 1 89.714 89.714 4 4.0588E-06 31639 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.694 37.987 29.93 0 19.117 71.416 27.289 29.069 28 0 19 70 28 28 1 0 1 4 1 2 28028 18358 1485;1750 17671 42352;42353;42354;42355 49036;49037;49038;49039 49038 4 SSYDVFQLEFNDGAYNIK Unmodified 2108.9691 0.96910039 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 0 6 0.816 1 1 1 83.798 83.798 3;4 6.8952E-11 31125 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.638 63.759 0 29.792 0 40.441 0 50.102 0 28 0 37 0 47 0 1 0 1 0 1 4185.6 18359 2131 17672 42356;42357;42358 49040;49041;49042 49041 3 SSYFWLCNALK Deamidation (N) 1388.6435 0.64347291 751 D3Z158;Q8BML9;F6TDS3 Qars yes no 0 1 0 0 12 0 1 80.355 80.355 3 0.01189 21909 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.783 33.178 0 20.216 0 61.208 0 29.848 0 19 0 56 0 28 0 1 0 1 0 1 921.36 18360 751 17673 42359 49043 49043 203 1 SSYVLSK Unmodified 782.41742 0.41741937 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 49.188 49.188 2 0.024851 12657 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.33 45.205 157.07 154.83 297.01 101.63 223.96 134.83 148 158 288 102 223 130 1 1 2 1 2 1 39787 18361 2179 17674 42360;42361 49044;49045 49045 2 SSYYVVSGNDPAAEEPSR Unmodified 1926.8595 0.85954994 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.33 4.03 1 1 1 51.258 51.258 2;3 3.9041E-19 16577 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.11 98.535 30.044 0 0 0 0 39.442 28 0 0 0 0 37 1 0 0 0 0 1 10123 18362 1382 17675 42362;42363;42364 49046;49047;49048 49047 3 STAGDTHLGGEDFDNR Unmodified 1690.7183 0.71830543 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 0 0 0 3.7 3.32 2 2 3 1 1 1 40.253 40.253 3;4 2.0415E-51 12099 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 184.87 157.77 745.27 662.56 758.88 740.69 1085.2 1193.6 701 664 756 732 1105 1146 9 9 8 10 11 11 925620 18363 1397;1762 17676 42365;42366;42367;42368;42369;42370;42371;42372;42373;42374 49049;49050;49051;49052;49053;49054;49055;49056;49057;49058;49059;49060;49061;49062;49063 49053 15 STAGDTHLGGEDFDNR Deamidation (N) 1691.7023 0.70232101 1762;1397 P17156;P63017;Q504P4 Hspa2;Hspa8 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein no no 0 1 0 0 1 0 1 40.343 40.343 4 5.2144E-05 11288 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.373 57.61 0 38.773 35.562 48.158 0 39.442 0 37 37 46 0 37 0 1 1 1 0 1 2228.5 18364 1397;1762 17676 42375 49064 49064 477 1 STAISLFYELSENDLNFIK Unmodified 2203.1049 0.10486559 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 8.88 1.83 2 2 2 1 1 103.15 103.15 3;4 8.2249E-45 36249 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.32 112.04 29.577 61.053 56.76 18.721 49.486 74.067 28 60 55 18 49 70 1 2 2 2 4 2 16839 18365 1652 17677 42376;42377;42378;42379;42380;42381;42382;42383 49065;49066;49067;49068;49069;49070;49071;49072 49068 8 STANNVEIHIPVPNDADSPK Unmodified 2117.0389 0.038911287 1524 P35585 Ap1m1 AP-1 complex subunit mu-1 yes yes 0 0 0 0 5 0 1 59.346 59.346 4 0.0098527 20419 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.174 19.582 0 38.116 74.918 64.275 122.57 0 0 37 74 65 120 0 0 1 1 1 1 0 2624.5 18366 1524 17678 42384 49073 49073 1 STAPLHSDQQPVPEQLR Unmodified 1901.9595 0.95953875 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 0 5 0 1 44.737 44.737 3 0.013966 13427 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.777 20.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18367 466 17679 42385 49074 49074 1 STAWPYFLPMLNR Unmodified 1594.7966 0.79661951 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 9.8 4.45 1 1 2 1 89.157 89.157 2;3 2.6688E-07 25376 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.39 81.535 45.929 61.505 36.137 23.785 61.097 89.933 43 60 35 23 61 86 3 3 2 2 3 5 43861 18368 65 17680 42386;42387;42388;42389;42390 49075;49076;49077;49078;49079 49077 5 STCIYGGAPK Unmodified 1052.4961 0.4960804 2135;1963 Q8BTS0;Q61656;S4R1I6;Q501J6;Q3U741;Q3TU25 Ddx5;Ddx17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 no no 0 0 0 0 7.5 0.5 1 1 45.863 45.863 2 2.2177E-07 11994 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 140.35 99.471 29.904 27.776 0 0 57.937 18.601 28 28 0 0 56 19 1 1 0 0 1 1 2866.5 18369 2135;1963 17681 42391;42392 49080;49081 49081 2 STCTINYSTSLPLAQGIK Unmodified 1952.9877 0.98772734 3122 Q9DBF1;G3UYR8 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 70.652 70.652 3 0.00022074 23661 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.819 32.987 69.745 0 99.375 125.24 97.278 123.66 65 0 97 120 93 116 1 0 1 1 1 1 18775 18370 3122 17682 42393;42394 49082;49083 49082 2 STCTYVGAAK Unmodified 1056.491 0.49099502 3157;2853 Q99L27;Q9DCZ1 Gmpr2;Gmpr GMP reductase 2;GMP reductase 1 no no 0 0 0 0 9.33 2.62 1 1 1 42.181 42.181 2;3 0.0014931 10995 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.028 47.288 148.69 39.368 77.148 125.89 132.8 138.58 139 37 74 121 130 130 2 1 1 2 2 1 11667 18371 2853;3157 17683 42395;42396;42397 49084;49085;49086 49084 3 STDCCGDNDPIDVCEIGSK Unmodified 2140.8347 0.83473345 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 3 0 1 61.48 61.48 3 0.00021669 21905 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.166 48.113 9.4497 18.19 19.419 0 0 0 9 18 19 0 0 0 1 1 1 0 0 0 2602.5 18372 2743 17684 42398 49087 49087 1 STDEVDSK Unmodified 879.38216 0.38215607 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 2.5 0.5 1 1 35.497 35.497 2 0.0096034 9903 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.802 46.636 206.37 120.49 198.23 295.11 359.82 275.42 194 120 203 287 366 268 2 1 2 2 2 2 23966 18373 2148 17685 42399;42400 49088;49089 49089 2 STDEVDSKR Unmodified 1035.4833 0.4832671 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 1 8.5 4.5 1 1 30.197 30.197 3 0.00032681 7045 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.33 70.796 0 485.24 569.26 412.39 619.55 535.57 0 465 570 419 628 519 0 2 2 2 2 2 34815 18374 2148 17686 42401;42402 49090;49091 49090 2 STDPTQIK Unmodified 888.45526 0.45526144 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 6 0 1 43.181 43.181 2 0.014296 12128 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.676 48.117 0 58.72 51.659 0 61.136 47.291 0 56 51 0 60 46 0 1 1 0 1 1 6236.7 18375 3249 17687 42403 49092 49092 1 STDVAEEVYTR Unmodified 1268.5885 0.58846046 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 4.2 4.45 1 2 1 1 47.642 47.642 2 8.7562E-17 14859 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.89 92.704 138.66 136.56 118.99 123.59 144.9 202.67 130 139 120 120 149 194 1 3 2 2 2 3 102920 18376 3307 17688 42404;42405;42406;42407;42408 49093;49094;49095;49096;49097;49098 49098 6 STEATLSFGYLDPFPPEERPEVK Unmodified 2608.2697 0.26969908 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 5.8 0.748 2 2 1 78.446 78.446 3;4;5 4.7783E-16 29347 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.622 76.578 128.35 137.03 132.34 54.486 120.08 165 121 139 130 56 121 158 4 4 3 2 3 4 30646 18377 1362 17689 42409;42410;42411;42412;42413 49099;49100;49101;49102;49103 49099 5 STEEPIVK Unmodified 901.47566 0.47566253 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 4 0 1 44.97 44.97 2 0.035339 13872 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.598 24.517 89.766 72.683 0 49.46 43.507 68.049 84 74 0 46 46 65 1 1 0 1 1 1 4769.7 18378 3245 17690 42414 49104 49104 1 STEESLSEDAFTESELSPIREELLSSEPR Unmodified 3266.5314 0.53140567 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 1 3 0 1 79.669 79.669 4 0.00075601 30150 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.625 34.845 9.657 0 0 0 0 9.594 9 0 0 0 0 9 1 0 0 0 0 1 1286.8 18379 2028 17691 42415 49105 49105 1 STEFNEHELK Unmodified 1232.5673 0.56733108 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 4 0.707 1 2 1 44.546 44.546 2;3 1.2455E-06 13323 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.44 74.838 474.48 247 476.34 405.36 303.3 470.89 446 259 469 395 306 447 4 3 3 4 3 3 158990 18380 1737 17692 42416;42417;42418;42419 49106;49107;49108;49109;49110 49110 5 STELGSDYYELSDSR Unmodified 1720.7428 0.74278885 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 5.5 4.39 1 1 1 1 58.413 58.413 2;3 2.186E-36 20260 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 173.71 160.39 216.61 285.57 374.24 273.86 441.31 153.89 204 288 374 277 438 148 2 5 5 4 4 3 98608 18381 1424 17693 42420;42421;42422;42423 49111;49112;49113;49114;49115 49114 5 STELLIR Unmodified 830.48617 0.48616764 1300 P84244;P02301;E0CZ27;F8WI35;A0A1W2P768;P84228;P68433 H3f3a;H3f3c;Hist1h3b;Hist1h3a Histone H3.3;Histone H3.3C;Histone H3;Histone H3.2;Histone H3.1 yes no 0 0 0 0 6.5 0.5 1 1 51.359 51.359 2 1.0924E-09 15968 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 173.85 62.161 755.12 605.05 795.09 658.11 437.46 624.98 711 629 799 653 461 598 3 3 3 3 2 3 255530 18382 1300 17694 42424;42425 49116;49117;49118 49116 3 STEMEVHELSR Unmodified 1316.6031 0.60306466 1907 Q2M3X8;B1B1B8 Phactr1 Phosphatase and actin regulator 1;Phosphatase and actin regulator yes no 0 0 0 0 4 0 1 40.265 40.265 3 0.036227 11598 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.516 27.885 0 0 0 20.056 37.781 0 0 0 0 19 37 0 0 0 0 1 1 0 2100.2 18383 1907 17695 42426 49119 49119 1 STEPCAHLLVSSIGVVGTAEQNR Unmodified 2424.2067 0.20672167 1182 O35215;G3UZN1 Ddt D-dopachrome decarboxylase no no 0 0 0 0 6 0 1 64.837 64.837 4 2.3264E-06 22287 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.541 42.883 39.347 26.521 36.979 28.4 0 39.442 37 28 37 28 0 37 1 1 1 1 0 1 3186.4 18384 1182 17696 42427 49120 49120 1 STEQILATLK Unmodified 1102.6234 0.6233894 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 0 0 0 9 0 1 68.577 68.577 2 0.010778 21968 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.395 33.174 60.088 0 0 49.416 45.846 0 56 0 0 46 46 0 1 0 0 1 1 0 2571.2 18385 2847 17697 42428 49121 49121 1 STESLQANVQR Unmodified 1231.6157 0.61567826 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 0 7.33 4.03 1 1 1 38.057 38.057 2 0.0030496 10717 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.533 43.736 69.484 17.545 28.923 28.531 56.607 58.61 65 19 28 28 56 56 3 1 1 1 2 2 8401.4 18386 1574 17698 42429;42430;42431 49122;49123;49124 49122 3 STFEEEGR Unmodified 953.40904 0.40903953 274 A0A1D5RLG3;Q80UJ7 Rab3gap1 Rab3 GTPase-activating protein catalytic subunit yes no 0 0 0 0 2 0 1 35.039 35.039 2 0.012545 9462 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.948 61.212 108.32 80.051 120.88 81.121 127.29 144.54 102 84 120 83 130 139 2 2 2 2 2 2 7134.4 18387 274 17699 42432 49125;49126 49125 2 STFFNVLTNSQASAENFPFCTIDPNESR Unmodified 3192.4458 0.44584232 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 8.33 0.471 2 1 93.482 93.482 3;4 2.2456E-12 33357 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.171 59.076 0 54.699 34.175 62.45 0 50.102 0 52 34 59 0 47 0 3 2 3 0 1 6861.2 18388 2999 17700 42433;42434;42435 49127;49128;49129;49130 49130 4 STFSGHGR Unmodified 847.39366 0.39366423 1821 P70699;F6R5R5 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 11 0 1 22.147 22.147 3 0.0013498 3478 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.91 85.229 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 610.1 18389 1821 17701 42436 49131 49131 1 STFVLDEFK Unmodified 1084.5441 0.54407645 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 7 0 1 72.86 72.86 2 0.00086391 25273 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 113.22 75.498 39.701 0 0 48.914 72.519 76.815 37 0 0 46 74 74 1 0 0 1 1 1 4840.4 18390 3094 17702 42437 49132 49132 1 STFVLDEFKR Unmodified 1240.6452 0.64518747 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 1 10.5 2.5 1 1 62.756 62.756 3 0.0045472 20000 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.107 15.095 481.27 267.83 578.74 510.72 358.99 551.54 453 278 573 505 370 527 2 1 2 2 1 2 96254 18391 3094 17703 42438;42439 49133;49134 49133 2 STGDVVAGR Unmodified 860.43519 0.4351947 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 4 0 1 31.984 31.984 2 0.0044858 7779 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.605 21.993 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18392 2845 17704 42440 49135 49135 1 STGEAFVQFASQEIAEK Unmodified 1840.8843 0.88430813 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 0 7.5 3.2 1 2 1 80.9 80.9 2;3;4 2.9429E-25 29873 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.99 106.92 158.19 165 231.98 187.35 112.67 127.92 149 167 232 186 111 120 2 2 3 3 2 1 59876 18393 1209;1808 17705 42441;42442;42443;42444 49136;49137;49138;49139 49137 4 STGEALVQGLMGAAVTLK Unmodified 1744.9393 0.93932058 993 F6SFF5;Q8K1Z0 Coq9 Ubiquinone biosynthesis protein COQ9, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 91.45 91.45 3 8.0263E-08 29725 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.66 85.296 0 29.134 39.368 0 66.137 28.503 0 28 38 0 65 28 0 1 1 0 2 1 6650.2 18394 993 17706 42445;42446 49140;49141 49141 2 STGEAVR Unmodified 718.36097 0.36096712 1356 P11983;F2Z483 Tcp1 T-complex protein 1 subunit alpha yes no 0 0 0 0 2.5 0.5 1 1 22.317 22.317 2 0.019609 3856 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.67 41.536 191.43 255.27 251.66 300.23 325.23 325.44 181 256 260 294 329 314 2 2 2 2 1 2 52658 18395 1356 17707 42447;42448 49142;49143 49143 2 STGFIPIKEDFGPEK Unmodified 1663.8457 0.84573777 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 7.5 0.5 1 1 67.666 67.666 3 3.0518E-05 22912 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.902 50.269 217.16 90.792 213.43 235.59 221.87 260.17 204 93 213 231 231 250 2 1 2 2 2 2 19445 18396 1382 17708 42449;42450 49144;49145 49144 2 STGGAPTFNVTVTMTAK Unmodified 1681.8345 0.83452116 1758 P62962;Q5SX49 Pfn1 Profilin-1;Profilin yes no 0 0 0 0 7 3.54 1 1 1 1 66.445 66.445 3 0.0001739 21015 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.712 31.614 356.21 149.01 57.81 255.92 215.34 203.02 333 157 56 241 222 195 5 3 1 5 4 3 21369 18397 1758 17709 42451;42452;42453;42454 49146;49147;49148;49149;49150 49149 5 STGPHPSAPAK Unmodified 1048.5302 0.53015772 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6.5 0.5 1 1 30.811 30.811 3 0.0011991 6347 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.439 45.168 0 59.584 0 0 58.576 0 0 56 0 0 56 0 0 1 0 0 1 0 3845.7 18398 3285 17710 42455;42456 49151;49152 49151 2 STGSASTAGAPPSELFPGPGER Unmodified 2071.9811 0.98106206 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 4.5 0.5 1 1 57.711 57.711 3 8.4434E-07 19620 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.537 44.609 29.699 47.712 17.546 0 0 57.848 28 47 19 0 0 56 1 1 1 0 0 2 10126 18399 573 17711 42457;42458 49153;49154 49154 2 STGSSDRPSAR Unmodified 1119.5269 0.52686325 188 A0A0R4J0T8;Q9D8S3 Arfgap3 ADP-ribosylation factor GTPase-activating protein 3 yes no 0 0 0 1 3.5 0.5 1 1 17.076 17.076 3 0.0015079 2413 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.037 52.556 11.761 6.321 10.816 14.543 6.0907 11.726 11 6 11 14 6 11 1 1 2 2 1 1 1187.3 18400 188 17712 42459;42460 49155;49156 49156 2 STGVLPTNPEESWQVYSSAQDSEGR Unmodified 2723.2311 0.23108175 1287 Q8R357;O88998 Olfm1 Noelin yes no 0 0 0 0 5 0 1 70.582 70.582 3 5.9581E-14 25652 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.091 63.587 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18401 1287 17713 42461 49157 49157 1 STGVPSGSSAATGSNR Acetyl (Protein N-term) 1476.6805 0.68046336 1763 P63024 Vamp3 Vesicle-associated membrane protein 3 yes yes 1 0 0 0 1 0 1 33.777 33.777 2 0.00020019 8408 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.185 48.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7308.8 18402 1763 17714 42462 49158 49158 1 STGYSSQPGAK Unmodified 1081.504 0.50400254 2492 Q8C2E7 Kiaa0196 WASH complex subunit strumpellin yes yes 0 0 0 0 6 0 1 35.112 35.112 3 0.011254 8395 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.35 24.969 39.701 0 0 39.925 27.454 0 37 0 0 37 28 0 1 0 0 1 1 0 1189.9 18403 2492 17715 42463 49159 49159 1 STIGNQVIR Unmodified 986.55089 0.55089316 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 6.5 0.5 1 1 41.987 41.987 2 0.00097431 10828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.668 25.812 39.369 41.691 20.469 38.551 35.611 38.426 37 42 23 37 37 37 1 1 1 1 1 1 5271.7 18404 960 17716 42464;42465 49160;49161 49161 2 STIGVEFATR Unmodified 1079.5611 0.56112349 1556 P46638;G3UY29;E9Q3P9;F8WGS1;G3UZD3;P62492 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 6 0 1 54.64 54.64 3 0.010076 17585 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.979 14.42 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2168.6 18405 1556 17717 42466 49162 49162 1 STIINLLDPPPEVSALINK Unmodified 2033.1409 0.14085716 240 A0A140T8I9;E9Q3L2;A0A338P7D3;A0A338P6F9 Pi4ka yes no 0 0 0 0 9.5 0.5 1 1 96.849 96.849 3 0.0014752 34671 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.116 25.02 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2270.2 18406 240 17718 42467;42468 49163;49164 49163 2 STILYAGNDK Unmodified 1080.5451 0.54513908 765;1103;2192 D3Z396;Q8BG33;Q99PJ0;G5E8G3;Q6DFY2 Ntm;Opcml Neurotrimin no no 0 0 0 0 7.25 0.829 1 1 2 52.625 52.625 2;3 3.6718E-15 15092 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 171.85 98.593 335.11 367.09 408.7 541.27 551.89 414.64 315 361 408 527 565 400 3 3 3 4 4 3 56406 18407 765;1103;2192 17719 42469;42470;42471;42472 49165;49166;49167;49168;49169 49168 5 STILYAGNDKWCLDPR Unmodified 1907.92 0.91998213 765 D3Z396;Q8BG33;Q99PJ0 Ntm Neurotrimin yes no 0 0 0 1 9 0 1 66.475 66.475 3 0.0037204 20986 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.079 33.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18408 765 17720 42473 49170 49170 1 STITDAGLEVMLEQMQGVVR Unmodified 2176.0868 0.086789457 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 13 0 1 95.372 95.372 3 0.0057885 38266 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.351 22.069 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 1645.2 18409 547 17721 42474 49171 49171 1 STLATSSSQPVWLTAMDCPTSGVVGLVNCLR Unmodified 3306.6047 0.60466793 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 0 1 95.304 95.304 4 3.6215E-06 34098 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.088 36.534 6.408 5.9519 0 6.4496 5.7657 6.2315 6 6 0 6 6 6 1 1 0 1 1 1 1242.8 18410 1412 17722 42475 49172 49172 1 STLEVLQLFPINIK Unmodified 1613.9392 0.93924423 496 A2AN08;F6SSP6 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 11 0 1 96.724 96.724 3 0.0011445 31548 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.248 39.141 39.613 17.545 0 0 0 39.442 37 19 0 0 0 37 1 1 0 0 0 1 3259.7 18411 496 17723 42476 49173 49173 1 STLFVPR Unmodified 818.46504 0.46503826 1900 Q11136 Pepd Xaa-Pro dipeptidase yes yes 0 0 0 0 10 0 1 52.308 52.308 2 0.044115 12590 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.035 46.724 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18412 1900 17724 42477 49174 49174 1 STLIDALCR Unmodified 1047.5383 0.53827956 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 63.438 63.438 2 0.0070926 20121 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.059 24.346 69.468 54.9 0 80.882 0 59.696 65 56 0 74 0 56 1 1 0 1 0 1 4932.9 18413 2178 17725 42478 49175 49175 1 STLIISGVSK Unmodified 1003.5914 0.59136099 2331 Q8CAA2;Q80X80;A0A1L1SSP2 C2cd2l C2 domain-containing protein 2-like yes no 0 0 0 0 9 0 1 60.41 60.41 3 0.024615 18107 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.598 14.842 48.895 0 77.827 44.773 46.059 0 46 0 74 46 46 0 1 0 1 1 1 0 3031.2 18414 2331 17726 42479 49176 49176 1 STLINSLFLTDLYPER Unmodified 1880.9884 0.98837927 899 E9Q3V6;P42208;F6WYM0;D3YYB1;D3Z3C0;F6UKN5;D3YZU7;D3Z1S1;D3YV76 Sept2 Septin-2 yes no 0 0 0 0 11.3 1.25 1 1 1 92.653 92.653 3 1.2564E-07 29716 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.82 96.971 49.128 45.631 0 57.902 56.196 29.31 46 46 0 56 56 28 1 1 0 2 2 1 27264 18415 899 17727 42480;42481;42482 49177;49178;49179 49178 3 STLINSLFLTDLYSPEYPGPSHR Deamidation (N) 2607.2857 0.2856835 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 1 0 0 7 0 1 85.11 85.11 3 2.8883E-09 31052 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.954 56.353 20.387 0 0 30.604 0 39.442 19 0 0 28 0 37 1 0 0 1 0 1 2840.6 18416 879 17728 42483 49180 49180 239 1 STLINSLFLTDLYSPEYPGPSHR Unmodified 2606.3017 0.30166791 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 11 1.41 2 2 2 2 2 86.572 86.572 3;4 1.1087E-15 30280 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.652 71.529 80.031 64.174 223.77 99.073 126 9.594 75 65 214 94 124 9 3 3 6 3 4 1 144910 18417 879 17728 42484;42485;42486;42487;42488;42489;42490;42491;42492;42493 49181;49182;49183;49184;49185;49186;49187;49188;49189;49190;49191;49192;49193 49181 13 STLINTLFK Unmodified 1035.5964 0.59644637 431 A2A6U3;Q80UG5;A2A6U5;A8Y5D3 Sept9 Septin-9 yes no 0 0 0 0 8 4.97 1 1 1 76.48 76.48 2 2.6671E-08 20367 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 166.33 119.64 49.358 524.55 0 0 239.53 620.41 46 493 0 0 229 582 1 2 0 0 1 2 130050 18418 431 17729 42494;42495;42496 49194;49195;49196;49197 49197 4 STLLELFGQIER Unmodified 1404.7613 0.76127986 2519 Q8CBE3;H3BJR7;H3BJS1;H3BK66;Q05BF4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 9.67 0.471 1 2 89.847 89.847 2;3 0.0010309 29070 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.962 43.888 39.701 0 0 61.208 0 9 37 0 0 56 0 9 1 0 0 1 0 1 12442 18419 2519 17730 42497;42498;42499 49198;49199;49200 49199 3 STLLFGQR Unmodified 920.50797 0.50796571 2139 Q61768;E9QAK5 Kif5b Kinesin-1 heavy chain;Kinesin-like protein yes no 0 0 0 0 10 0 1 55.748 55.748 2 0.0066225 14088 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.813 49.243 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18420 2139 17731 42500 49201 49201 1 STLMDTLFNTK Unmodified 1269.6275 0.6274885 112;3317 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6;Q9R1T4;A2A3W1 Sept11;Sept6 Septin-11;Septin-6 no no 0 0 0 0 10.8 1.48 1 1 1 1 79.224 79.224 3 9.6947E-09 27104 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.79 91.463 149.12 51.061 236.98 270.01 107.48 204.01 140 56 231 260 111 194 4 2 5 5 3 4 113310 18421 112;3317 17732 42501;42502;42503;42504 49202;49203;49204;49205;49206;49207;49208 49203 7 STLMNTLFNTTFETEEASHHEECVR Unmodified 2982.3124 0.31238531 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 7.5 0.5 1 1 72.001 72.001 4 0.0015016 24907 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 39.153 32.041 78.559 52.664 156.02 36.928 66.371 84.142 74 56 149 37 65 83 1 1 2 1 1 2 8721.7 18422 575 17733 42505;42506 49209;49210;49211 49210 3 STLNEIYFGK Unmodified 1170.5921 0.59208927 495;1565 A2AMW0;P47757 Capzb F-actin-capping protein subunit beta no no 0 0 0 0 9.25 2.28 1 1 1 1 67.012 67.012 3 0.0004156 21149 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.298 48.942 462.89 657.74 745.11 576.43 524.26 426.72 436 658 751 574 528 409 4 7 8 7 6 4 120370 18423 495;1565 17734 42507;42508;42509;42510 49212;49213;49214;49215;49216;49217;49218;49219 49218 8 STLNELVDYITISR Unmodified 1622.8516 0.85155143 2016 Q3UZJ4;Q61151;A0A1W2P838 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 0 8.67 0.471 1 2 87.6 87.6 2;3 0.00088512 30757 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.732 25.995 0 29.142 38.86 9 19.874 0 0 28 37 9 19 0 0 2 1 1 1 0 10863 18424 2016 17735 42511;42512;42513 49220;49221;49222 49221 3 STLNPQWNESFTFK Unmodified 1697.8049 0.80493559 2030 Q4VA93 Prkca Protein kinase C yes yes 0 0 0 0 8.25 0.433 3 1 73.401 73.401 2;3;4 3.6603E-08 24201 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.09 83.029 0 68.053 202.8 92.134 118.29 198.19 0 65 195 93 120 194 0 1 2 1 2 2 32239 18425 2030 17736 42514;42515;42516;42517 49223;49224;49225;49226 49226 4 STLPDADRER Unmodified 1158.5629 0.56291441 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 yes no 0 0 0 1 3 0 1 30.986 30.986 3 3.3487E-05 7813 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.61 72.644 0 97.259 101.25 73.511 71.058 86.45 0 93 102 74 74 83 0 1 1 1 1 1 13373 18426 310 17737 42518 49227 49227 1 STLQEIETR Unmodified 1075.551 0.55095274 954 Q8CHT1;E9QK62 Ngef Ephexin-1 yes no 0 0 0 0 4 0 1 46.696 46.696 2 0.0033386 14680 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.201 37.406 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18427 954 17738 42519 49228 49228 1 STLQTLPEIVAK Unmodified 1298.7446 0.74456717 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 69.862 69.862 3 0.00058425 23211 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.65 38.052 118.64 90.952 0 109.77 91.19 0 111 93 0 102 92 0 2 2 0 2 2 0 7840.2 18428 3395 17739 42520;42521 49229;49230 49230 2 STLTDSLVCK Unmodified 1122.5591 0.55907458 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 58.928 58.928 2;3 5.8984E-05 20346 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.2 66.839 246.96 162.84 251.02 238.52 196.13 252.59 232 167 252 232 204 241 2 1 3 2 2 2 25581 18429 1652 17740 42522;42523;42524;42525;42526 49231;49232;49233;49234;49235 49235 5 STLVHSLFLTDLYK Unmodified 1635.8872 0.88720866 410;3398 A0A338P6R8;A0A338P769;A0A338P755;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 11 0.816 2 2 2 77.513 77.513 3;4 3.7063E-29 20919 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 153.81 109.3 800.58 754.89 668.67 478.82 524.32 603.39 751 756 668 464 517 575 7 7 6 4 3 6 233650 18430 410;3398 17741 42527;42528;42529;42530;42531;42532 49236;49237;49238;49239;49240;49241;49242;49243;49244 49243 9 STLVHSLFLTDLYKDR Unmodified 1907.0153 0.015262719 410;3398 A0A338P6R8;A0A338P769;A0A338P755;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 1 10.3 0.471 2 1 70.596 70.596 3;4 2.4799E-05 20814 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.354 48.879 128.43 65.854 38.362 188.22 98.841 98.179 120 65 37 176 102 93 2 1 1 3 2 1 43819 18431 410;3398 17742 42533;42534;42535 49245;49246;49247 49245 3 STLVLHDLLK Unmodified 1137.6758 0.67575932 816;2230 Q6PAJ1;E9PUE7;Q5SSL4;H3BJY3 Bcr;Abr Breakpoint cluster region protein;Active breakpoint cluster region-related protein no no 0 0 0 0 8 0 1 66.146 66.146 3 0.0022926 21499 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.064 25.497 0 77.186 92.714 73.653 90.579 96.553 0 74 93 74 93 93 0 1 1 1 1 1 6870.3 18432 2230;816 17743 42536 49248 49248 1 STLVNSLFLTDLYR Unmodified 1640.8774 0.87737225 1477 P28661;Q5ND13;Q5ND09;Q5ND18 Sept4 Septin-4 yes no 0 0 0 0 11 0.894 2 1 2 87.856 87.856 2;3 1.312E-06 27948 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.15 81.132 108.51 55.551 57.89 98.662 52.464 97.359 103 56 56 94 56 92 4 2 1 3 3 2 32609 18433 1477 17744 42537;42538;42539;42540;42541 49249;49250;49251;49252;49253;49254 49252 6 STLVNTLFK Unmodified 1021.5808 0.5807963 3384;402 A0A2R8W6V9;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 11.2 1.17 2 1 1 1 71.369 71.369 2;3 3.319E-05 26536 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.66 70.432 562.04 910.45 664.04 484.36 475.45 890.25 528 896 672 465 471 845 5 6 5 3 3 5 231230 18434 402;3384 17745 42542;42543;42544;42545;42546 49255;49256;49257;49258;49259;49260;49261 49261 7 STMKPVQK Unmodified 917.50044 0.50043749 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 9.5 0.5 1 1 38.791 38.791 3 0.049341 7363 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.55 26.056 314.73 133.23 371.55 115.39 229.47 290.87 296 151 357 120 234 279 2 2 2 1 2 2 14031 18435 1419 17746 42547;42548 49262;49263 49263 2 STMQELNSR Unmodified 1064.4921 0.49205765 661 CON__P35527 yes yes 0 0 0 0 5 0 1 37.742 37.742 2 0.0082655 10056 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.552 36.365 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 18436 661 17747 42549 49264 49264 1 STNGDTFLGGEDFDQALLR Deamidation (N) 2055.9385 0.93852854 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 1 0 0 5.17 3.58 3 1 1 1 82.095 82.095 2;3 3.1991E-12 30814 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.29 96.198 101.59 16.274 47.229 47.172 44.654 83.856 95 19 46 47 43 80 3 1 3 3 2 4 42347 18437 1533 17748 42550;42551;42552;42553;42554;42555 49265;49266;49267;49268;49269;49270;49271 49266 572 7 STNGDTFLGGEDFDQALLR Unmodified 2054.9545 0.95451296 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 3 0 1 78.117 78.117 3 8.1092E-05 29670 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.989 40.708 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18438 1533 17748 42556 49272 49272 1 STNTDLSLSSYDEGQGSK Acetyl (Protein N-term) 1929.844 0.84395945 292 A0A1L1SR69;A0A1L1ST61;A0A1L1SV00;Q8R472;Q9JLR9 Higd1a HIG1 domain family member 1A, mitochondrial yes no 1 0 0 0 2 0 2 62.755 62.755 2;3 7.3302E-08 22113 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.898 49.666 20.121 18.373 29.092 0 0 20.254 19 19 28 0 0 19 1 1 1 0 0 1 5699.8 18439 292 17749 42557;42558 49273;49274 49274 2 STPEYFAER Unmodified 1098.4982 0.49818889 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 7.33 4.03 1 1 1 46.332 46.332 2 0.0028297 14611 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.267 49.498 186.88 190.99 168.72 218.75 277.4 97.293 176 194 167 213 278 93 2 2 1 2 3 1 29651 18440 1050;1380 17750 42559;42560;42561 49275;49276;49277 49275 3 STPLSDTK Unmodified 847.42871 0.42871234 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 42.085 42.085 2 0.0037337 12256 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.67 60.989 410.12 372.4 506.26 496.86 613.43 402.85 385 371 507 491 607 385 4 3 4 4 4 3 51781 18441 1382 17751 42562;42563;42564;42565;42566 49278;49279;49280;49281;49282 49282 5 STPSLERPEPR Unmodified 1267.6521 0.65206377 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 1 4.5 0.5 1 1 35.175 35.175 3 0.0086591 9242 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.889 25.891 78.721 91.969 36.52 50.278 0 59.696 74 92 37 46 0 56 2 2 1 1 0 1 8340.3 18442 281 17752 42567;42568 49283;49284 49283 2 STPSQVTSEEK Unmodified 1191.5619 0.56191135 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4 0 1 38.736 38.736 2 0.056351 10966 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.466 22.351 49.273 16.894 0 0 0 0 46 19 0 0 0 0 1 1 0 0 0 0 2078.6 18443 510 17753 42569 49285 49285 1 STPSSGDVQVTEDAVR Unmodified 1646.7748 0.77475768 1924 Q3THK3 Gtf2f1 General transcription factor IIF subunit 1 yes yes 0 0 0 0 2 0 1 45.948 45.948 3 9.1907E-05 14341 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.481 47.744 9.5107 19.439 8.107 9.3538 0 0 9 19 9 9 0 0 1 1 1 1 0 0 1748.6 18444 1924 17754 42570 49286 49286 1 STPSSQPSANGVQTEGLDYDR Deamidation (N) 2208.9771 0.97709889 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173;E9QKR1 Enah Protein enabled homolog yes no 0 1 0 0 2.33 0.471 2 1 49.72 49.72 3 6.038E-11 16011 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.98 65.344 0 18.576 37 9.837 0 9.594 0 18 37 9 0 9 0 2 2 1 0 1 8066.4 18445 56 17755 42571;42572;42573 49287;49288;49289;49290 49287 18 4 STPTAEDVTAPLVDER Unmodified 1699.8265 0.8264589 46 A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau yes no 0 0 0 0 3 0.816 1 1 1 59.041 59.041 2;3 2.8477E-06 20530 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.346 52.805 59.674 75.686 25.097 99.315 44.553 87.207 56 75 28 93 46 83 2 2 2 3 2 3 10949 18446 46 17756 42574;42575;42576 49291;49292;49293 49293 3 STPTESELK Unmodified 990.48696 0.4869555 3250 Q9JME7 Trappc2l Trafficking protein particle complex subunit 2-like protein yes yes 0 0 0 0 4.5 0.5 1 1 43.069 43.069 2 0.0086631 12942 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.915 15.507 29.737 27.31 28.508 0 0 0 28 28 28 0 0 0 1 1 1 0 0 0 1819.1 18447 3250 17757 42577;42578 49294;49295 49294 2 STPTPELTSK Unmodified 1059.5448 0.54480473 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 5.5 0.5 1 1 47.324 47.324 2 5.4204E-05 14088 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.61 63.758 59.729 0 60.291 0 48.116 0 56 0 56 0 46 0 2 0 2 0 1 0 8139.5 18448 2691;1024 17758 42579;42580 49296;49297 49297 2 STQDLSDVSTDEVGIPLR Unmodified 1930.9484 0.94836495 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8 Sorbs1 yes no 0 0 0 0 3.5 0.5 1 1 68.107 68.107 3 8.1271E-11 24411 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.511 60.682 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18449 353 17759 42581;42582 49298;49299 49299 2 STQFEYAWCLVR Unmodified 1558.7238 0.7238485 2917 Q9CQ92;G3X9U9 Fis1 Mitochondrial fission 1 protein yes no 0 0 0 0 9.25 2.28 1 1 1 1 74.658 74.658 2;3 4.9913E-08 24876 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.67 88.603 59.704 36.703 33.491 23.143 0 0 56 37 32 23 0 0 2 1 1 1 0 0 11624 18450 2917 17760 42583;42584;42585;42586 49300;49301;49302;49303 49302 4 STQGAEEVLK Unmodified 1060.5401 0.5400537 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 4 0 1 47.347 47.347 2 0.004036 14965 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.23 23.663 0 48.944 0 50.278 0 0 0 46 0 46 0 0 0 1 0 1 0 0 3188.3 18451 3266 17761 42587 49304 49304 1 STQLLQAAAAEASLNK Unmodified 1614.8577 0.85769944 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 7.5 0.5 1 1 71.972 71.972 3 7.8506E-06 24126 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.16 80.96 138.69 0 134.01 133.64 24.656 158.13 130 0 130 130 28 149 2 0 2 2 1 2 25190 18452 1983 17762 42588;42589 49305;49306 49306 2 STQVVSDAAYK Unmodified 1167.5772 0.57716749 3134 Q9DC07;F6RM14;B7ZCI2 Nebl LIM zinc-binding domain-containing Nebulette yes no 0 0 0 0 5 0 1 47.559 47.559 2 0.0012159 14816 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.021 41.862 9.3998 28.844 18.78 0 0 0 9 28 19 0 0 0 1 1 1 0 0 0 2026.1 18453 3134 17763 42590 49307 49307 1 STQYQDLLQDLSEK Unmodified 1666.805 0.80499517 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 6 0 1 78.533 78.533 3 0.0060852 28769 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.892 26.785 20.159 0 38.271 37.287 46.403 0 19 0 37 37 46 0 1 0 1 1 1 0 2631.6 18454 581 17764 42591 49308 49308 1 STSETTEEAFSSSVR Unmodified 1616.7166 0.71657409 2517 Q8CAQ8 Immt MICOS complex subunit Mic60 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 47.492 47.492 2;3 9.6282E-59 15103 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 206.03 170.36 99.43 120.07 134.02 16.044 152.32 81.539 93 114 130 15 149 79 2 2 2 1 4 3 38564 18455 2517 17765 42592;42593;42594;42595 49309;49310;49311;49312 49309 4 STSIQSFK Unmodified 896.46035 0.46034682 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 0 7.5 0.5 1 1 50.225 50.225 2 0.003633 13935 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.19 68.633 68.418 149.61 194.16 168.45 133.3 126.78 65 148 195 167 139 121 1 2 2 2 2 1 11015 18456 269 17766 42596;42597 49313;49314 49314 2 STSLDVEPIYTFR Unmodified 1526.7617 0.76167379 1236 O55106;F8WH41 Strn Striatin yes no 0 0 0 0 6 0 1 70.609 70.609 3 0.0064552 25110 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.704 22.585 0 19.566 38.86 0 29.288 0 0 19 37 0 28 0 0 1 1 0 1 0 5317.9 18457 1236 17767 42598 49315 49315 1 STSPAPADVAPAQEDLR Unmodified 1723.8377 0.83769228 1859 P97855 G3bp1 Ras GTPase-activating protein-binding protein 1 yes yes 0 0 0 0 2 0 1 48.768 48.768 3 0.00010802 15534 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.372 41.27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18458 1859 17768 42599 49316 49316 1 STSQGFCFNILCVGETGIGK Deamidation (N) 2174.9976 0.9976401 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6 Sept11 Septin-11 yes no 0 1 0 0 1 0 1 85.145 85.145 3 0.00013603 30096 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.658 39.568 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18459 112 17769 42600 49317 49317 49 1 STSQGFCFNILCVGETGIGK Unmodified 2174.0136 0.013624514 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6 Sept11 Septin-11 yes no 0 0 0 0 9 0 1 84.995 84.995 3 5.8286E-11 29549 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.132 83.363 0 0 0 19 0 46 0 0 0 19 0 46 0 0 0 1 0 1 5015.4 18460 112 17769 42601 49318;49319 49318 2 STSQQGEEPQK Unmodified 1217.5524 0.5524093 2568 Q8JZP2 Syn3 Synapsin-3 yes yes 0 0 0 0 2.5 1.5 1 1 38.39 38.39 3 9.4585E-06 7596 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.752 79.371 0 48.694 14.972 68.756 74.246 0 0 46 19 65 74 0 0 1 1 2 2 0 5350.1 18461 2568 17770 42602;42603 49320;49321 49321 2 STSSCISSDALLPDPYESER Unmodified 2212.9794 0.97940708 2718 Q8VHL1 Setd7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 0 4 0 1 65.846 65.846 3 0.022338 23535 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.779 21.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18462 2718 17771 42604 49322 49322 1 STSVVEQGGIQTVDQLIK Unmodified 1901.0106 0.010571271 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 6.5 0.5 1 1 74.472 74.472 3 0.00030488 26993 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.348 24.912 39.418 0 47.49 46.773 35.893 19.23 37 0 46 46 37 19 1 0 1 1 1 1 6298.8 18463 3327 17772 42605;42606 49323;49324 49323 2 STTEPGPPGYSVSPPVPGR Unmodified 1880.9268 0.92684164 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 0 5 0 1 55.041 55.041 3 1.4545E-07 18430 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.557 66.419 0 48.944 0 79.696 63.036 37.643 0 46 0 74 65 37 0 1 0 1 1 1 5486.1 18464 2167 17773 42607 49325 49325 1 STTTGHLIYK Unmodified 1119.5924 0.59242362 1729;1341 P10126;D3Z3I8;D3YZ68;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 8 0.816 1 1 1 42.871 42.871 3 7.3731E-08 9902 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 137.95 91.952 451.31 584.92 551.2 568.53 394.29 665.66 426 587 560 557 408 635 3 4 3 4 3 4 87454 18465 1341;1729 17774 42608;42609;42610 49326;49327;49328;49329 49329 4 STTTIGLVQALGAHLR Unmodified 1636.9261 0.92605378 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 11 0.816 1 1 1 71.033 71.033 3 1.27E-07 18166 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.74 71.051 29.904 27.776 88.315 57.75 85.17 47.979 28 28 84 56 83 46 1 1 2 1 2 1 38274 18466 2804 17775 42611;42612;42613 49330;49331;49332;49333 49333 4 STVAQLVK Unmodified 844.50182 0.5018177 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 10.1 2.13 1 2 1 1 1 1 2 53.028 53.028 2;3 8.5163E-07 14568 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 168.23 81.368 2386.6 2532.4 2393.5 2073.5 3157.5 3300.8 2247 2553 2400 2052 3194 3181 9 9 9 7 8 9 805910 18467 1881 17776 42614;42615;42616;42617;42618;42619;42620;42621;42622 49334;49335;49336;49337;49338;49339;49340;49341;49342;49343;49344 49337 11 STVAQLVKR Unmodified 1000.6029 0.60292873 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 10 0 1 45.696 45.696 3 0.0004418 10008 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.1 68.135 152.98 95.264 176.37 0 130.32 164.71 144 102 169 0 130 158 1 1 1 0 1 1 13644 18468 1881 17777 42623 49345 49345 1 STVASCMHR Oxidation (M) 1063.4539 0.453898 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 1 0 6.67 0.471 1 2 21.385 21.385 3 0.0026072 2950 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.998 69.06 26.588 28.807 21.843 33.767 15.637 17.056 25 29 22 32 16 16 2 2 2 2 1 2 3923.8 18469 1355 17778 42624;42625;42626 49346;49347;49348 49347 79 3 STVASCMHR Unmodified 1047.459 0.45898338 1355 P11798;F8WIS9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 9.2 2.32 1 1 1 1 1 28.449 28.449 2;3 1.5189E-09 5246 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 169.44 138.87 74.078 81.995 174.88 108.79 112.42 48.504 70 84 171 111 112 46 2 3 5 5 4 3 50651 18470 1355 17778 42627;42628;42629;42630;42631 49349;49350;49351;49352;49353 49349 5 STVASMMHR Unmodified 1018.4688 0.46881979 1475;2818;103 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;Q8CCM0;Q923T9;A0A2I3BQP6;A0A286YCW8;A0A286YDL6;A0A286YCB8;A0A286YDK9 Camk2b;Camk2d;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 7.5 0.5 1 1 38.522 38.522 3 0.00014274 8483 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.89 94.819 109.09 118.72 95.8 44.568 0 49.036 102 120 93 46 0 46 1 2 1 1 0 1 18225 18471 1475;103;2818 17779 42632;42633 49354;49355 49355 2 STVDPPAPSAGR Unmodified 1153.5728 0.57275081 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 4 0 1 36.694 36.694 2 0.016665 9982 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.066 21.596 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18472 1822 17780 42634 49356 49356 1 STVEYNIFEGMECHGSPLVVISQGK Deamidation (N) 2781.299 0.29896708 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 1 0 0 6 0 1 81.583 81.583 4 9.0161E-05 30189 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.867 34.706 29.684 0 60.442 0 46.807 38.106 28 0 56 0 46 37 1 0 1 0 1 1 4007.2 18473 1850;2212 17781 42635 49357 49357 749 1 STVEYNIFEGMECHGSPLVVISQGK Unmodified 2780.315 0.31495149 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 7 0 2 81.654 81.654 3;4 6.4137E-20 29407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.762 72.809 0 47.816 67.461 0 29.288 0 0 46 65 0 28 0 0 1 1 0 1 0 9772.7 18474 1850;2212 17781 42636;42637 49358;49359 49358 2 STVFTIFGSNK Unmodified 1199.6186 0.61863837 1262 O88307 Sorl1 Sortilin-related receptor yes yes 0 0 0 0 12 0 1 73.993 73.993 3 0.027088 19369 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.243 16.124 59.91 35.328 0 49.77 27.002 0 56 37 0 46 28 0 1 1 0 1 1 0 3234.4 18475 1262 17782 42638 49360 49360 1 STVLSEPVLFLKPSTAYAPEGSPVLMPAYCR Unmodified 3379.7196 0.71962133 2631 Q8R0F8 Fahd1 Acylpyruvase FAHD1, mitochondrial yes yes 0 0 0 1 9 0 1 86.864 86.864 4 1.3201E-05 30371 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.511 39.968 0 9.4227 9.1727 0 0 20.254 0 9 9 0 0 19 0 1 1 0 0 1 1857.2 18476 2631 17783 42639 49361 49361 1 STVLSLDWHPNNVLLAAGSCDFK Unmodified 2543.2479 0.2478582 3303 Q9R0Q6;A0A0G2JF52 Arpc1a Actin-related protein 2/3 complex subunit 1A no no 0 0 0 0 8 0 1 82.491 82.491 3 3.3752E-16 29205 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.463 86.751 9.657 0 0 0 0 29.848 9 0 0 0 0 28 1 0 0 0 0 1 3026.1 18477 3303 17784 42640 49362 49362 1 STVPHAYATADCDLGAVLK Unmodified 1987.9673 0.96732625 2423 Q8BKZ9 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 0 6 0 1 62.674 62.674 3 4.9227E-06 21380 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.261 49.896 20.154 0 39.127 18.077 19.044 0 19 0 37 19 19 0 1 0 1 1 1 0 3243.2 18478 2423 17785 42641 49363 49363 1 STVSIEEAVAK Unmodified 1132.5976 0.59756858 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 5 0 1 57.402 57.402 2 3.3889E-14 19474 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 159.34 96.367 108.69 0 126.72 130.66 206.08 190.26 102 0 123 130 209 184 1 0 1 1 1 1 15136 18479 1424 17786 42642 49364 49364 1 STWVILHHK Unmodified 1119.6189 0.61891314 1097 G5E850;P56395 Cyb5a Cytochrome b5 yes no 0 0 0 0 10.5 0.5 1 1 46.805 46.805 4 0.0011198 10475 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.438 58.932 78.709 91.441 131.84 65.921 72.067 67.234 74 93 130 65 74 65 1 2 2 1 1 1 13752 18480 1097 17787 42643;42644 49365;49366 49365 2 STYEDQSAR Unmodified 1055.452 0.45196697 1904 Q14C51 Ptcd3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial yes yes 0 0 0 0 3 0 1 26.892 26.892 2 0.0046477 5973 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.345 51.713 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18481 1904 17788 42645 49367 49367 1 STYGVTK Unmodified 754.38612 0.38611924 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 7 0 1 41.112 41.112 2 0.027593 10366 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.253 53.253 98.984 0 135.24 110.51 146.14 104.56 93 0 130 111 148 102 1 0 1 1 1 1 7509.1 18482 1873 17789 42646 49368 49368 1 SVAAIHPSLEIPMLIPK Unmodified 1815.0328 0.032827038 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 9 0 1 79.48 79.48 3 0.01831 27147 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.757 24.065 20.045 67.808 0 39.404 55.136 47.463 19 65 0 37 56 46 1 1 0 1 1 1 2114.8 18483 2671 17790 42647 49369 49369 1 SVAALLAGTTEAILTPFER Unmodified 1959.0677 0.06769222 485 A2AKW0;Q5HZI9;G3UYJ3;A2AKV9 Slc25a51 Solute carrier family 25 member 51 yes no 0 0 0 0 11.3 1.25 1 1 1 106.65 106.65 3 1.5365E-14 33798 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.41 111.85 0 5 0 9.6683 8.9699 0 0 5 0 9 9 0 0 1 0 1 1 0 6035.3 18484 485 17791 42648;42649;42650 49370;49371;49372 49370 3 SVACQTDVVTESTDPVK Unmodified 1834.8619 0.86185812 641 B9EJA2 Cttnbp2 Cortactin-binding protein 2 yes yes 0 0 0 0 4 0 1 55.274 55.274 3 0.0066154 18846 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.257 20.876 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2491.3 18485 641 17792 42651 49373 49373 1 SVAFPCISTGVFGYPNEEAAEVVLASLR Unmodified 2982.4797 0.47970863 2802 Q922B1 Macrod1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 0 0 0 0 8 0 1 102.93 102.93 4 4.4829E-08 36193 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.783 44.041 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 926.37 18486 2802 17793 42652 49374 49374 1 SVAGGFVYTYK Unmodified 1190.5972 0.59717465 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 9 0 1 62.883 62.883 2 9.1441E-05 19250 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.597 59.304 39.701 0 0 30.604 0 0 37 0 0 28 0 0 1 0 0 1 0 0 4732 18487 2799 17794 42653 49375 49375 1 SVAQQASLTEQR Unmodified 1316.6684 0.66844211 919;937 E9Q6Q4;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 7 3.54 1 1 1 1 39.54 39.54 2;3 2.8759E-43 10955 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 168.83 123.06 59.549 93.38 106.1 36.155 65.542 71.943 56 93 105 37 65 68 1 2 3 1 2 2 21370 18488 919;937 17795 42654;42655;42656;42657 49376;49377;49378;49379 49379 4 SVAQYTGGIIK Unmodified 1135.6237 0.62372375 3137 Q9DC61;A2AIW9 Pmpca Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 0 9 0 1 61.288 61.288 2 0.0027159 18505 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.64 37.596 39.522 0 30.145 30.256 18.484 0 37 0 28 28 19 0 2 0 1 1 1 0 2697.4 18489 3137 17796 42658 49380;49381 49380 2 SVASEAGQGGTSSFQR Unmodified 1567.7227 0.72266253 3179 Q9ER73 Elp4 Elongator complex protein 4 yes yes 0 0 0 0 4 0 1 34.634 34.634 3 0.059851 9103 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.133 5.842 0 69.16 0 60.05 61.558 106.98 0 65 0 56 65 102 0 1 0 1 1 1 15438 18490 3179 17797 42659 49382 49382 1 SVATLILDSLLQCPIDTR Unmodified 2014.0769 0.076876698 3286 Q9QZB7 Actr10 Actin-related protein 10 yes yes 0 0 0 0 11.3 1.25 1 1 1 105.31 105.31 3 2.3671E-26 33601 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 137.73 109.88 0 0 0 0 18.093 9.3345 0 0 0 0 18 9 0 0 0 0 2 1 13515 18491 3286 17798 42660;42661;42662 49383;49384;49385;49386 49383 4 SVAVNTEEK Unmodified 975.48729 0.48728985 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 0 7.5 3.2 1 2 1 41.04 41.04 2;3 0.00058846 11698 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.83 67.673 89.397 140.48 82.933 149.24 36.978 49.036 84 139 83 148 37 46 2 3 2 3 1 1 21622 18492 2691 17799 42663;42664;42665;42666 49387;49388;49389;49390 49387 4 SVCDYFFEAQER Unmodified 1549.6507 0.65074314 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 0 5.5 0.5 1 1 68.395 68.395 2;3 0.03012 24643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.777 32.045 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18493 2650 17800 42667;42668 49391;49392 49391 2 SVDEALR Unmodified 788.40283 0.40283194 2116 Q61171 Prdx2 Peroxiredoxin-2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 39.715 39.715 2 0.005509 11411 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.87 44.926 1457.1 1512.6 1658.3 1479.6 1677.1 1787.8 1374 1540 1679 1473 1727 1722 3 4 3 4 4 4 369770 18494 2116 17801 42669;42670;42671;42672 49393;49394;49395;49396 49394 4 SVDEIIR Unmodified 830.44978 0.44978213 604 B1AXW5;B1AXW6;P35700 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 5 0.816 1 1 1 50.047 50.047 2 0.0057931 16365 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.24 47.536 458.42 153.68 188.91 205.16 195.24 371.79 429 167 193 198 192 354 2 1 1 1 1 2 126350 18495 604 17802 42673;42674;42675 49397;49398;49399 49397 3 SVDEVFGEVVK Unmodified 1206.6132 0.61321864 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 0 8 3.56 1 1 1 71.193 71.193 2;3 0.00054494 25960 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.062 51.404 49.026 95.169 76.242 106.79 145.62 124.83 46 93 74 102 148 121 1 2 2 2 3 3 32465 18496 3130 17803 42676;42677;42678 49400;49401;49402 49400 3 SVDLVMQELINTVK Unmodified 1587.8542 0.85419397 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 11 2 1 1 97.359 97.359 3 0.00066126 39092 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.244 42.189 9.657 0 0 20.767 37.714 68.214 9 0 0 19 37 65 1 0 0 1 1 2 7539.1 18497 960 17804 42679;42680 49403;49404 49404 2 SVDPTLALSVYLR Unmodified 1432.7926 0.79257999 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 82.291 82.291 2;3 8.5279E-05 29208 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.069 57.139 252.49 109.94 38.821 227.41 82.887 92.509 236 113 37 209 84 89 6 5 1 5 3 4 62865 18498 2185 17805 42681;42682;42683;42684;42685;42686 49405;49406;49407;49408;49409;49410;49411 49407 7 SVDYEVFGTVQGVCFR Unmodified 1861.8669 0.86688392 1634 P56375 Acyp2 Acylphosphatase-2 yes yes 0 0 0 0 6 0 1 76.689 76.689 3 0.0039688 27918 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.37 29.115 0 19.729 29.112 0 0 29.848 0 19 28 0 0 28 0 1 1 0 0 1 2691.2 18499 1634 17806 42687 49412 49412 1 SVEAAAELSAK Unmodified 1074.5557 0.55570376 3027 Q9D0J8 Ptms Parathymosin yes yes 0 0 0 0 7.2 2.99 2 1 1 1 53.3 53.3 2;3 6.5083E-10 16133 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 119.53 81.236 384.93 206.52 412.46 329.22 223.06 262.84 362 213 408 324 223 250 5 3 5 4 3 3 59912 18500 3027 17807 42688;42689;42690;42691;42692 49413;49414;49415;49416;49417;49418 49417 6 SVEAEPK Unmodified 758.38103 0.38103386 2021 Q3V156;Q91XL9;D3Z7I9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 0 4 0 1 36.769 36.769 2 0.054392 10042 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.38 23.525 59.523 64.473 40.306 118.92 0 0 56 65 46 111 0 0 1 1 1 1 0 0 6218 18501 2021 17808 42693 49419 49419 1 SVEEELHQR Unmodified 1125.5415 0.54145068 969 E9QNE9;Q99JP0 Map4k3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 yes no 0 0 0 0 2 0 1 35.665 35.665 3 0.0045258 9790 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 62.303 41.748 39.404 26.68 27.228 28.481 26.615 39.749 37 28 28 28 28 38 1 1 1 1 1 1 2542.2 18502 969 17809 42694 49420 49420 1 SVEEPVQPGGTGLSDSR Unmodified 1713.817 0.81695684 717 Q91YS4;D3YXZ3 Klc2 yes no 0 0 0 0 3 0 1 48.215 48.215 3 0.00023971 15811 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.412 32.18 49.065 26.029 27.196 28.983 0 0 46 28 28 28 0 0 1 1 1 1 0 0 7728.4 18503 717 17810 42695 49421 49421 1 SVEETLR Unmodified 832.42905 0.42904669 1422 P20108 Prdx3 Thioredoxin-dependent peroxide reductase, mitochondrial yes yes 0 0 0 0 3 0 1 39.183 39.183 2 0.027665 11643 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 97.033 26.363 78.467 102.06 70.665 64.754 110.53 75.73 74 102 74 65 111 74 1 1 1 1 1 1 28285 18504 1422 17811 42696 49422 49422 1 SVELEEALPPTSADGTAR Acetyl (Protein N-term) 1883.9113 0.91125116 2349 Q80ZM5 H1fx yes yes 1 0 0 0 1 0 1 71.399 71.399 2 1.1279E-20 24147 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 54.524 21.116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18505 2349 17812 42697 49423 49423 1 SVENLATATTTLTSLAQLLGK Unmodified 2131.1736 0.17361385 2236 Q6PD26 Pigs GPI transamidase component PIG-S yes yes 0 0 0 0 11.7 0.471 1 2 103.61 103.61 3;4 3.0055E-11 29012 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.49 79.789 6.438 7.448 60.592 20.767 19.874 0 6 7 56 19 19 0 1 1 1 2 1 0 5301.8 18506 2236 17813 42698;42699;42700 49424;49425;49426 49426 3 SVESVPK Unmodified 744.40177 0.4017693 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 9.5 3.5 1 1 41.745 41.745 2 0.027718 11468 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.602 41.48 148.75 78.282 0 108.92 136.46 114.43 139 83 0 102 139 111 1 1 0 1 1 1 25390 18507 1474 17814 42701;42702 49427;49428 49427 2 SVETDSSTVEHVR Unmodified 1444.6794 0.67940073 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 3.5 0.5 1 1 35.404 35.404 3 9.5222E-28 9865 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 173.19 147.21 39.305 36.116 35.963 38.298 0 49.036 37 37 37 37 0 46 1 1 1 1 0 1 18652 18508 2057 17815 42703;42704 49429;49430 49429 2 SVETLLDLIMK Unmodified 1260.6999 0.69992516 2885 Q99P58 Rab27b Ras-related protein Rab-27B yes yes 0 0 0 0 9.5 0.5 1 1 101.92 101.92 3 0.0011093 33048 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.5 44.037 0 9 0 19 0 0 0 9 0 19 0 0 0 1 0 1 0 0 1511.5 18509 2885 17816 42705;42706 49431;49432 49432 2 SVEVSDPVPAGDLVK Unmodified 1510.7879 0.78788854 1431 P21981 Tgm2 Protein-glutamine gamma-glutamyltransferase 2 yes yes 0 0 0 0 5 0 1 65.578 65.578 3 0.016667 23264 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.237 18.039 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18510 1431 17817 42707 49433 49433 1 SVFFGPDFITVTK Unmodified 1456.7602 0.76021723 122 Q9QZ23;A0A0N4SUH8;D3Z285 Nfu1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 85.723 85.723 2;3 2.9961E-18 27433 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.55 111.69 20.292 18.848 19 16.395 0 0 19 19 19 15 0 0 1 1 1 1 0 0 19222 18511 122 17818 42708;42709;42710 49434;49435;49436 49435 3 SVFGGFINYFK Unmodified 1277.6445 0.64445919 3182 Q9ERB0 Snap29 Synaptosomal-associated protein 29 yes yes 0 0 0 0 12 0 2 87.652 87.652 2;3 8.5267E-18 24733 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 140.83 109.46 20.387 0 0 0 28.987 8.7668 19 0 0 0 28 9 1 0 0 0 1 1 7631.4 18512 3182 17819 42711;42712 49437;49438 49438 2 SVFIIFFQGDQLK Unmodified 1540.829 0.8289655 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 10.2 4.14 1 1 3 1 94.885 94.885 2;3 6.0648E-21 27055 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 157.68 119.28 112.34 134.67 58.149 118.49 176.45 125.54 105 131 56 112 175 120 5 7 2 4 7 6 24567 18513 1151 17820 42713;42714;42715;42716;42717;42718 49439;49440;49441;49442;49443;49444;49445;49446;49447;49448;49449 49441 11 SVFPEAIIIRPSDIFGR Unmodified 1916.052 0.051982576 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 1 9.5 0.5 1 1 84.746 84.746 3 1.9146E-17 29420 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.3 109.09 0 39.368 0 130.1 56.315 148.17 0 37 0 120 56 139 0 1 0 2 1 1 32132 18514 141 17821 42719;42720 49450;49451 49450 2 SVGDIEQELER Unmodified 1273.615 0.61500956 2230 Q6PAJ1 Bcr Breakpoint cluster region protein yes yes 0 0 0 0 2.5 0.5 1 1 63.04 63.04 2 1.0236E-05 22583 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.46 56.16 0 78.736 37 0 37.054 47.979 0 74 37 0 37 46 0 1 1 0 1 1 5923.5 18515 2230 17822 42721;42722 49452;49453 49453 2 SVGNTIEPVILFQK Unmodified 1543.861 0.86099391 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8.5 0.5 1 1 78.552 78.552 2;3 2.1093E-21 26665 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.91 112.11 127.57 44.908 161.98 102.31 147.96 123.7 120 46 157 102 148 120 3 1 3 2 2 2 40157 18516 1382 17823 42723;42724 49454;49455;49456 49456 3 SVGQLVVSAAAASKPPPVASVSILAPK Unmodified 2543.4687 0.46867366 4 A0A075B6D7;P59644 Inpp5j Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A yes no 0 0 0 1 6.5 5.5 1 1 81.458 81.458 4 2.3657E-07 28587 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.465 51.25 0 9.576 38.797 48.532 28.013 20.254 0 9 37 47 28 19 0 1 1 2 1 1 4891.8 18517 4 17824 42725;42726 49457;49458 49457 2 SVGQYDNR Unmodified 937.42536 0.42535829 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 7 3.54 1 1 1 1 31.427 31.427 2 0.007974 7210 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.815 58.656 108.75 149.16 122.47 78.072 75.794 264.34 102 149 121 75 74 250 2 4 2 2 1 4 27013 18518 68 17825 42727;42728;42729;42730 49459;49460;49461;49462 49462 4 SVGYPHPEWIWR Unmodified 1525.7466 0.74663285 1841 P97300;H3BIX4;Z4YLB7;H3BKA7 Nptn Neuroplastin yes no 0 0 0 0 8 0.816 1 1 1 65.123 65.123 3 1.3852E-18 21044 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.63 130.42 207.9 26.213 202.86 162.94 158.93 106.09 195 28 195 158 158 102 3 1 3 3 2 2 57766 18519 1841 17826 42731;42732;42733 49463;49464;49465;49466 49465 4 SVHELEK Unmodified 840.43413 0.43413207 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 6 0 1 37.386 37.386 3 0.0052912 9416 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.55 43.832 49.358 0 0 71.045 0 59.696 46 0 0 65 0 56 1 0 0 1 0 1 4015 18520 2696 17827 42734 49467 49467 1 SVHSLISDFK Unmodified 1131.5924 0.59242362 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 0 9 0 1 60.006 60.006 3 0.019434 17922 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.228 25.764 59.344 33.755 96.413 42.385 114.16 0 56 37 93 46 111 0 1 1 1 1 1 0 4482 18521 1160 17828 42735 49468 49468 1 SVHSLISDFKDPPTAK Unmodified 1740.9046 0.90464964 1160 O08599;A0A140LHJ4 Stxbp1 Syntaxin-binding protein 1 yes no 0 0 0 1 9.5 0.866 1 3 3 1 61.032 61.032 3;4;5 7.1052E-12 19217 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.93 106.19 1017.3 691.28 1472.8 1465.2 1104.3 1358 957 712 1458 1429 1124 1302 8 6 10 10 8 9 176040 18522 1160 17829 42736;42737;42738;42739;42740;42741;42742;42743 49469;49470;49471;49472;49473;49474;49475;49476;49477;49478;49479;49480 49469 12 SVIDPIPAPVGDSNVDSGAK Unmodified 1936.9742 0.97418577 2556 Q8CIN4 Pak2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 yes yes 0 0 0 0 5 0 1 68.142 68.142 3 1.151E-06 24484 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.767 41.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18523 2556 17830 42744 49481 49481 1 SVIDYQTHFR Unmodified 1264.62 0.62003536 733 E9Q7G1;D3YZZ5 Tmed7 yes no 0 0 0 0 7 0 1 48.396 48.396 3 0.00027872 13730 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.827 42.933 39.468 46.283 0 0 0 29.848 37 46 0 0 0 28 1 1 0 0 0 1 4249.8 18524 733 17831 42745 49482 49482 1 SVIEPLPVTPTR Unmodified 1307.7449 0.74490152 1099 G5E884;O88643 Pak1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 yes no 0 0 0 0 9 2.89 1 2 1 2 61.211 61.211 2;3 8.9853E-13 21493 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 127.93 74.457 98.421 77.843 152.7 87.063 129.39 116.24 92 74 148 84 130 112 2 2 4 3 3 2 48100 18525 1099 17832 42746;42747;42748;42749;42750;42751 49483;49484;49485;49486;49487;49488 49487 6 SVILEAFSSPSEEVK Unmodified 1620.8247 0.82466798 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 75.982 75.982 3 7.6297E-17 26732 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.97 101.28 245.99 186.39 337.26 238.39 261.53 259.04 232 185 333 241 269 250 4 2 4 4 4 4 43554 18526 2264 17833 42752;42753;42754;42755 49489;49490;49491;49492 49490 4 SVINLLFAAYTGDVSALR Unmodified 1909.0309 0.030912783 789 D3Z7P3;D3Z7P4;F7B327 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 7 6 2 2 104.7 104.7 2;3 2.6891E-20 34462 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 133.93 108.57 4.2733 2.8923 9.35 13.802 44.715 0 4 3 9 13 44 0 1 1 3 2 4 0 11253 18527 789 17834 42756;42757;42758;42759 49493;49494;49495;49496;49497 49495 5 SVIPDGPAAQDGK Unmodified 1253.6252 0.62518031 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1;A0A140LHL1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 5 0 1 51.628 51.628 3 0.0318 16820 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.799 10.056 0 0 0 70.245 42.551 68.076 0 0 0 65 46 65 0 0 0 1 1 1 6358.6 18528 87 17835 42760 49498 49498 1 SVISGGLDALEFIGK Unmodified 1504.8137 0.81370936 2706 Q8VE88 Fam114a2 Protein FAM114A2 yes yes 0 0 0 0 9 0 1 90.102 90.102 3 2.4639E-05 31803 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.678 50.828 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1014.1 18529 2706 17836 42761 49499 49499 1 SVITYVSSLYDAFPK Unmodified 1688.8661 0.86613887 2787 S4R1P5;Q91ZU6;E9Q9X1;A0A087WRB8 Dst Dystonin yes no 0 0 0 0 12 1 1 1 75.128 75.128 3 0.004349 29307 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.318 0 117.41 236.42 150.08 30.604 191.42 152.31 111 232 148 28 188 148 1 2 1 1 1 1 41052 18530 2787 17837 42762;42763 49500;49501 49500 2 SVKPLALFDSK Unmodified 1203.6863 0.68632401 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 1 10 0 1 66.659 66.659 3 0.035729 18913 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.298 34.614 157.36 114.63 145.74 151.02 109.17 0 148 120 148 148 111 0 1 1 1 1 1 0 11115 18531 63 17838 42764 49502 49502 1 SVLAAATEYFTPLLSGQFSESR Unmodified 2373.1852 0.18524117 2526 Q8CE33 Klhl11 Kelch-like protein 11 yes yes 0 0 0 0 11.5 0.5 1 1 100.85 100.85 3 5.4797E-12 28593 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.912 62.32 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 822.66 18532 2526 17839 42765;42766 49503;49504 49504 2 SVLDAAQIVGLNCLR Unmodified 1627.8716 0.87157537 2137 Q61699;E9Q0U7;D3Z3I9;A0A0J9YTZ7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 9.67 0.471 1 2 81.276 81.276 2;3 1.1195E-15 25636 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.182 75.653 0 20.216 0 30.604 0 39.442 0 19 0 28 0 37 0 1 0 1 0 1 15578 18533 2137 17840 42767;42768;42769 49505;49506;49507 49506 3 SVLEGGDIPLQGLSGLK Unmodified 1681.9251 0.92505073 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 7.5 0.5 1 1 81.136 81.136 3 4.021E-06 28556 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.583 49.781 19.965 57.445 47.449 98.144 36.016 28.82 19 56 47 93 37 28 1 2 1 2 1 1 8081.2 18534 353 17841 42770;42771 49508;49509 49509 2 SVLENHHISSVFR Unmodified 1523.7845 0.78447492 373 Q6PDS5;A0A2I3BPC1;Q01065 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 8 0 1 47.072 47.072 4 0.0026428 12578 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.939 32.544 0 0 0 59.682 81.117 86.163 0 0 0 56 83 83 0 0 0 1 1 1 1988.9 18535 373 17842 42772 49510 49510 1 SVLFVCLGNICR Unmodified 1436.7268 0.72682539 2036;3055 Q561M1;Q9D358;A0A1W2P7X3 Acp1 Low molecular weight phosphotyrosine protein phosphatase no no 0 0 0 0 6.5 5.5 1 1 77.544 77.544 2;3 0.0025438 20945 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.056 34.634 30.044 0 0 40.841 36.826 0 28 0 0 38 37 0 1 0 0 1 1 0 12115 18536 2036;3055 17843 42773;42774 49511;49512 49512 2 SVLISLK Unmodified 758.49019 0.49019038 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 0 9.25 4.82 1 1 1 1 64.896 64.896 2 0.0083965 17538 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.67 0 1079.3 1210 469.21 1015.5 468.57 1098.3 1012 1213 465 952 464 1037 3 4 3 3 3 3 557230 18537 599;600 17844 42775;42776;42777;42778 49513;49514;49515;49516 49514 4 SVLLEAIR Unmodified 899.54402 0.54401687 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 8 0 1 63.713 63.713 2 0.032377 20267 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.919 27.673 108.23 89.492 129.37 120.75 143.29 173.93 102 93 130 120 148 167 1 1 1 1 1 1 19564 18538 2674 17845 42779 49517 49517 1 SVLMSLK Unmodified 776.44661 0.44661101 2197 Q6IRU5 Cltb Clathrin light chain B yes yes 0 0 0 0 9.25 4.82 1 1 1 1 63.645 63.645 2 0.0083965 15458 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.67 53.629 642.46 153.86 455.1 428.58 621.73 562.16 602 158 439 414 625 544 4 1 2 3 3 3 207030 18539 2197 17846 42780;42781;42782;42783 49518;49519;49520;49521 49520 4 SVLNNPSK Unmodified 857.46068 0.46068117 1140;200;646 A2A542;A2A545;A2A543;A0A0R4J194;Q8R3Z5;A0A0A6YWX5;C7IVS7;Q8CC27;J3QK20;Q8R0S4 Cacnb1;Cacnb2;Cacnb4 Voltage-dependent L-type calcium channel subunit beta-1;Voltage-dependent L-type calcium channel subunit beta-2;Voltage-dependent L-type calcium channel subunit beta-4 no no 0 0 0 0 8 0 2 42.654 42.654 2;3 0.012124 10411 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.657 45.345 177.11 109.46 76.899 65.614 45.102 69.29 166 111 74 65 46 65 2 1 1 1 1 1 6778.5 18540 200;646;1140 17847 42784;42785 49522;49523 49523 2 SVLNNPSKR Unmodified 1013.5618 0.56179219 1140 J3QK20;Q8R0S4 Cacnb4 Voltage-dependent L-type calcium channel subunit beta-4 yes no 0 0 0 1 10 0 1 35.42 35.42 3 0.053503 6149 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.189 12.429 39.441 51.605 0 49.525 40.012 47.894 37 51 0 46 42 46 1 1 0 1 1 1 2359 18541 1140 17848 42786 49524 49524 1 SVLPVSK Unmodified 728.44324 0.44324019 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 9 0 2 52.496 52.496 2;3 0.01797 14249 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.032 17.674 458.24 29.315 558.4 513.83 65.345 77.019 430 28 541 499 65 74 1 1 2 1 1 1 51475 18542 2513 17849 42787;42788 49525;49526 49525 2 SVLQAVQK Unmodified 871.51272 0.51271674 2583;2279 Q7M6W1;A3QM89;Q8K0T0 Rtn1 Reticulon;Reticulon-1 no no 0 0 0 0 10.3 2 2 2 2 3 51.286 51.286 2;3 0.0011058 17709 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.63 0 1361.5 918.91 1486.7 1363.9 1517.2 1672 1280 932 1478 1355 1551 1606 9 7 9 10 8 8 110340 18543 2279;2583 17850 42789;42790;42791;42792;42793;42794;42795;42796;42797 49527;49528;49529;49530;49531;49532;49533;49534;49535;49536;49537 49536 11 SVLQPSQQK Unmodified 1013.5506 0.55055881 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 9.33 2.62 1 1 1 42.621 42.621 2;3 0.00016747 10420 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.62 43.668 197.45 100.77 91.277 146.49 0 99.138 185 102 93 139 0 93 3 2 2 2 0 1 20672 18544 513 17851 42798;42799;42800 49538;49539;49540 49539 3 SVLTQPGAYSPVLISQLTQMASQLR Unmodified 2687.4316 0.43163623 473 F7BPW6;E9QAT4;A2AIX1 Sec16a yes no 0 0 0 0 12 0 1 98.802 98.802 3 0.0011869 28241 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.428 10.792 0 0 0 0 9.0934 9.3345 0 0 0 0 9 9 0 0 0 0 1 1 869.81 18545 473 17852 42801 49541 49541 1 SVLVDFLIGSGLK Unmodified 1346.781 0.78095267 3205 Q9JHU9 Isyna1 Inositol-3-phosphate synthase 1 yes yes 0 0 0 0 1 0 1 100.85 100.85 3 0.00017454 33987 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.412 36.034 5.3126 0 8.8095 20.242 0 20.254 5 0 9 19 0 19 1 0 1 1 0 1 1110.3 18546 3205 17853 42802 49542 49542 1 SVLVSAGNVK Unmodified 972.5604 0.56039521 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8.5 0.5 1 1 52.7 52.7 2;3 2.9523E-05 14369 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.81 65.601 89.059 0 0 109.09 127.36 105.1 83 0 0 102 130 102 1 0 0 1 1 1 9529.2 18547 3204 17854 42803;42804 49543;49544 49544 2 SVLWVSADGLR Unmodified 1201.6455 0.64552182 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 0 9 0 1 70.04 70.04 2 0.010874 22677 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.102 23.721 78.806 0 100.23 0 0 108.73 74 0 93 0 0 102 1 0 1 0 0 1 11375 18548 1171 17855 42805 49545 49545 1 SVMAAAQVAGLNCLR Unmodified 1559.7912 0.79121656 1581 P48722;E0CY23;A0A0N4SVU2 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 10.3 0.471 2 1 67.872 67.872 2;3 3.267E-07 19501 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.77 80.358 59.744 25.152 36.556 68.031 44.39 78.683 56 28 37 65 46 75 1 1 1 2 1 2 11749 18549 1581 17856 42806;42807;42808 49546;49547;49548 49547 3 SVMDATQIAGLNCLR Unmodified 1647.8073 0.80726055 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 7.5 0.5 1 1 71.579 71.579 2 1.229E-06 24017 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.39 75.79 20.149 0 39.932 19 0 0 19 0 37 19 0 0 1 0 1 1 0 0 5956.7 18550 1957 17857 42809;42810 49549;49550 49550 2 SVMDQANLQR Unmodified 1160.5608 0.56080592 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 5 0 1 44.555 44.555 2 0.035026 13366 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.721 21.334 39.53 0 28.81 28.887 0 0 37 0 28 28 0 0 1 0 1 1 0 0 4053.2 18551 1581 17858 42811 49551 49551 1 SVNESLNNLFITEEDYQALR Deamidation (N) 2355.123 0.12303485 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 5.62 2.87 4 2 1 1 84.012 84.012 3 3.3132E-22 29599 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.47 111.59 0 38.14 68.926 26.041 27.464 29.064 0 37 66 27 28 28 0 3 3 3 2 2 25634 18552 2185 17859 42812;42813;42814;42815;42816;42817;42818;42819 49552;49553;49554;49555;49556;49557;49558;49559;49560;49561 49552 872;873;874 10 SVNESLNNLFITEEDYQALR Unmodified 2354.139 0.13901926 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 3.56 1 1 1 81.972 81.972 3 8.4189E-39 30437 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 148.06 118.59 78.719 191.04 93.077 49.46 166.39 172.8 74 186 92 46 166 167 2 4 2 1 4 4 200310 18553 2185 17859 42820;42821;42822 49562;49563;49564;49565;49566 49564 5 SVNESLNNLFITEEDYQALR 2 Deamidation (N) 2356.1071 0.10705043 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 2 0 0 6 0 1 84.293 84.293 3 0.028284 31356 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.779 21.743 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18554 2185 17859 42823 49567 49567 872;873;874 1 SVNEVMEWMNNVMNAQAK Unmodified 2093.9333 0.9332657 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 11 0 1 95.956 95.956 3 8.364E-07 31231 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.548 60.127 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 2159.4 18555 2137 17860 42824 49568 49568 1 SVNFSLTPNEIK Unmodified 1347.7034 0.70343063 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 9 2.35 1 2 1 67.827 67.827 2;3 1.7096E-14 22396 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.16 99.072 138.12 271.63 315.4 165 275.19 146.3 130 269 314 167 271 139 2 3 3 2 2 2 41443 18556 1382 17861 42825;42826;42827;42828 49569;49570;49571;49572 49571 4 SVNQSLLELHK Unmodified 1266.6932 0.6932003 1335 P09528 Fth1 Ferritin heavy chain;Ferritin heavy chain, N-terminally processed yes yes 0 0 0 0 8.5 2.69 1 1 1 1 56.224 56.224 3 5.6614E-06 16850 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.66 54.657 98.88 376.23 326.61 380.3 247.16 220.01 93 365 325 370 250 213 1 4 3 4 2 2 67163 18557 1335 17862 42829;42830;42831;42832 49573;49574;49575;49576 49575 4 SVPAASGGDKEAVAR Unmodified 1413.7212 0.72120596 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 1 5.5 0.5 1 1 38.095 38.095 3 3.262E-07 10270 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.71 52.194 99.316 0 79.567 0 75.428 57.544 93 0 74 0 74 56 1 0 1 0 1 1 7017.2 18558 2255 17863 42833;42834 49577;49578 49577 2 SVPAFIDISEEDQAAELR Acetyl (Protein N-term) 2030.9797 0.97966507 2833 Q99JX4 Eif3m Eukaryotic translation initiation factor 3 subunit M yes yes 1 0 0 0 1.5 0.5 1 1 89.935 89.935 3 1.0859E-19 29424 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 94.882 59.953 2 0 2 0 0 0 2 0 2 0 0 0 1 0 1 0 0 0 2456.5 18559 2833 17864 42835;42836 49579;49580;49581 49581 3 SVPEMDPAATIPR Unmodified 1382.6864 0.68640036 2058 Q5SRX1;Q5SXA5 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 5 0 1 60.26 60.26 3 0.0011388 20874 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.628 32.46 29.545 46.204 44.73 47.612 0 0 28 46 46 46 0 0 1 1 1 1 0 0 3501.7 18560 2058 17865 42837 49582 49582 1 SVPFLPLLGGCVDDTILSR Unmodified 2058.082 0.081962076 1913 Q3TBW2 Mrpl10 39S ribosomal protein L10, mitochondrial yes yes 0 0 0 0 10 0 1 97.292 97.292 3 1.4336E-07 31825 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.391 66.121 12.816 11.904 0 0 0 15.99 12 12 0 0 0 15 1 1 0 0 0 1 1352.8 18561 1913 17866 42838 49583 49583 1 SVPHEDYR Unmodified 1001.4567 0.45665842 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 3.5 0.5 1 1 30.639 30.639 3 0.0011365 7658 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.74 75.344 0 19 47.659 47.438 0 39.442 0 19 46 46 0 37 0 1 1 1 0 1 18088 18562 521 17867 42839;42840 49584;49585 49584 2 SVPLAATSMLITQGLISK Unmodified 1829.0332 0.033220969 2965 Q9CRD0;A0A0J9YTV6;A0A0J9YUK7 Ociad1 OCIA domain-containing protein 1 yes no 0 0 0 0 6.75 5.76 2 1 1 92.105 92.105 3 2.0519E-35 33068 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 148.52 120.87 68.125 119.69 85.797 125.4 137.52 122.5 64 118 86 121 141 118 5 7 5 7 8 6 28586 18563 2965 17868 42841;42842;42843;42844 49586;49587;49588;49589;49590;49591;49592;49593;49594 49591 9 SVPSLCGVDHTER Unmodified 1455.6776 0.67762659 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 5.5 0.5 1 1 44.093 44.093 3 2.166E-19 12552 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 149.96 127.76 48.789 123.29 65.95 95.321 69.359 106.75 46 120 65 92 74 102 1 2 1 2 2 2 28613 18564 1783 17869 42845;42846 49595;49596 49596 2 SVPTWLK Unmodified 829.46979 0.46978929 1718 P62301;Q921R2;A0A0U1RQ71 Rps13 40S ribosomal protein S13 yes no 0 0 0 0 9 0 1 63.302 63.302 2 0.030515 19462 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.74 26.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18565 1718 17870 42847 49597 49597 1 SVQACLAK Unmodified 875.45349 0.4534873 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 46.533 46.533 2 0.0036781 12276 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.96 71.078 0 68.117 62.367 87.002 0 78.884 0 65 65 83 0 74 0 1 1 1 0 1 5673.1 18566 570 17871 42848 49598 49598 1 SVQLTWTPGDDNNSPITK Unmodified 1971.9538 0.95378467 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 7 0.816 1 1 1 69.595 69.595 3 2.1223E-15 24508 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.475 53.92 0 38.773 35.562 48.158 0 20.254 0 37 37 46 0 19 0 1 1 1 0 1 6837.4 18567 331 17872 42849;42850;42851 49599;49600;49601 49599 3 SVQNHNNK Unmodified 939.45224 0.45224175 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7 0.816 1 1 1 22.039 22.039 3 0.0022018 3238 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.302 58.422 76.62 82.529 36.903 94.527 145.48 84.327 72 83 40 91 146 83 3 3 1 3 3 3 8022.9 18568 2185 17873 42852;42853;42854 49602;49603;49604 49604 3 SVQPLADDDSKPK Unmodified 1398.6991 0.69907354 373 Q6PDS5;A0A2I3BPC1;Q01065 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 1 5.5 0.5 1 1 46.641 46.641 3;4 0.002984 14410 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.042 46.198 48.854 35.157 112.93 132.38 158.14 0 46 37 112 130 157 0 1 1 2 2 2 0 7270.2 18569 373 17874 42855;42856 49605;49606 49605 2 SVQPTSEER Unmodified 1031.4884 0.48835248 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 5.5 4.39 1 1 1 1 28.231 28.231 2 2.2081E-45 6591 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 209.73 99.608 152.38 125.37 124.62 149.32 122.89 100.42 143 129 125 144 126 97 2 3 2 3 2 1 27576 18570 431 17875 42857;42858;42859;42860 49607;49608;49609;49610 49608 4 SVQSQGFK Unmodified 879.44503 0.4450311 3334 Q9WUL7 Arl3 ADP-ribosylation factor-like protein 3 yes yes 0 0 0 0 7 0 1 42.355 42.355 2 0.015105 10946 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.213 38.495 39.1 56.052 53.571 77.689 0 78.884 37 56 56 74 0 74 1 1 1 1 0 1 5394.9 18571 3334 17876 42861 49611 49611 1 SVQTFADK Unmodified 894.4447 0.44469675 495 A2AMW0 Capzb yes yes 0 0 0 0 9.33 2.62 1 1 1 48.765 48.765 2 0.0029172 13351 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.82 58.762 474.6 443.2 469.74 471.1 544.33 454.32 447 454 466 466 556 434 3 3 2 3 3 2 89058 18572 495 17877 42862;42863;42864 49612;49613;49614 49613 3 SVQTTLQTDEVK Unmodified 1347.6882 0.6881745 2367 Q8BFZ9;A0A1B0GSD8;A0A1B0GT43;A0A1B0GRQ1;A0A1B0GQZ0 Erlin2 Erlin-2 no no 0 0 0 0 6 0 1 51.754 51.754 3 0.0001471 16189 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.565 54.262 0 98.952 0 61.208 0 0 0 93 0 56 0 0 0 1 0 1 0 0 3553.1 18573 2367 17878 42865 49615 49615 1 SVQVSTLR Unmodified 888.50288 0.50288033 3303 Q9R0Q6 Arpc1a Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 0 8.5 2.69 1 1 1 1 41.995 41.995 2 0.0017576 10873 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.41 60.718 708.13 496.16 670.43 881.88 441.71 994.77 666 502 650 851 465 945 3 2 2 3 2 3 108830 18574 3303 17879 42866;42867;42868;42869 49616;49617;49618;49619 49617 4 SVQVVSAAAAAK Acetyl (Protein N-term) 1142.6295 0.62953741 1040 F8WGT1;Q68FL4;E9PX77 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 1 0 0 0 8.33 3.4 1 1 1 63.447 63.447 2 3.7558E-05 22418 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.353 29.288 29.691 125.67 179.39 177.57 218.54 190.97 28 120 176 176 223 185 1 2 2 3 3 3 20338 18575 1040 17880 42870;42871;42872 49620;49621;49622 49620 3 SVQYDDVPEYKDR Unmodified 1612.7369 0.73691561 897 E9Q4G8;E9Q3Q6;Q61490;Q5MPX5 Alcam CD166 antigen yes no 0 0 0 1 4 0 1 48.389 48.389 3 0.0075116 15489 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.168 33.062 69.745 0 0 0 45.781 67.984 65 0 0 0 46 65 1 0 0 0 1 1 4831.7 18576 897 17881 42873 49623 49623 1 SVSAFAPICNPVLCSWGK Unmodified 1991.9597 0.95973845 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2 Esd S-formylglutathione hydrolase yes no 0 0 0 0 10.9 1.25 1 2 2 1 1 84.252 84.252 3;4 1.0322E-09 26796 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.77 83.432 20.387 202.65 265.86 144.32 340.22 212.92 19 195 259 140 333 204 1 5 5 3 5 3 95734 18577 1122 17882 42874;42875;42876;42877;42878;42879;42880 49624;49625;49626;49627;49628;49629;49630;49631;49632 49626 9 SVSAFAPICNPVLCSWGK Deamidation (N) 1992.9438 0.94375403 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2 Esd S-formylglutathione hydrolase yes no 0 1 0 0 10 0 1 84.361 84.361 2 0.06374 26833 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.378 32.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18578 1122 17882 42881 49633 49633 1 SVSCLKPVPIVGTK Unmodified 1483.8432 0.84323535 2635 Q8R127 Sccpdh Saccharopine dehydrogenase-like oxidoreductase yes yes 0 0 0 1 10.5 0.5 1 1 59.677 59.677 3 0.0002924 15542 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.344 61.544 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17394 18579 2635 17883 42882;42883 49634;49635 49635 2 SVSDDSEK Unmodified 865.36651 0.36650601 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 3 0 1 33.677 33.677 2 0.030162 9088 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.23 36.792 0 0 49.772 0 38.044 19.168 0 0 46 0 37 19 0 0 1 0 1 1 2332 18580 3245 17884 42884 49636 49636 1 SVSDNDIR Unmodified 904.42502 0.42502394 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 5.25 4.49 1 2 1 33.569 33.569 2;3 0.00038141 9053 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 154.12 70.854 247.2 255.84 247.04 300 387.78 344.98 232 260 251 297 394 334 2 3 2 4 3 3 88099 18581 1875 17885 42885;42886;42887;42888 49637;49638;49639;49640 49638 4 SVSDYDGK Unmodified 869.37668 0.37667677 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 4 0 1 42.427 42.427 2 0.022648 12675 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.679 42.601 79.402 0 0 0 94.662 76.183 74 0 0 0 93 74 1 0 0 0 1 1 4564.3 18582 1331 17886 42889 49641 49641 1 SVSEGHLK Unmodified 855.44503 0.4450311 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 6 0.816 1 1 1 34.751 34.751 3 0.0013311 7411 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.29 61.279 363.89 786.05 583.66 785.41 776.4 708.31 344 771 604 749 800 680 2 3 2 2 3 2 67672 18583 1304 17887 42890;42891;42892 49642;49643;49644 49644 3 SVSLYYTGEK Unmodified 1145.5605 0.56045479 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 7.5 0.5 1 1 57.496 57.496 2 1.262E-05 17369 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.41 72.453 0 97.104 46.882 39.373 102.55 67.984 0 92 46 37 102 65 0 2 1 1 2 1 10899 18584 1333 17888 42893;42894 49645;49646 49646 2 SVSNLSWLK Acetyl (Protein N-term) 1074.571 0.5709599 2028 Q4KMM3 Oxr1 Oxidation resistance protein 1 yes yes 1 0 0 0 8 1 1 1 81.594 81.594 2 0.00054176 28074 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.676 19.134 78.751 64.966 54.392 46.171 121.42 57.544 74 65 56 46 120 56 2 1 1 1 2 1 15646 18585 2028 17889 42895;42896 49647;49648 49648 2 SVSPGVTQAVVEEHCASPEEK Unmodified 2239.0427 0.042676036 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3.5 0.5 1 1 50.943 50.943 3;4 1.3489E-08 17190 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.001 61.595 0 0 130.05 19.594 0 108.73 0 0 121 19 0 102 0 0 2 1 0 2 13519 18586 1382 17890 42897;42898 49649;49650 49649 2 SVSQGFCFNILCVGETGLGK Unmodified 2172.0344 0.034359956 3317 Q9R1T4;A2A3W1 Sept6 Septin-6 yes no 0 0 0 0 10 1 1 1 88.144 88.144 3 1.2797E-10 31053 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 88.176 77.119 20.387 0 0 0 0 29.848 19 0 0 0 0 28 1 0 0 0 0 1 10872 18587 3317 17891 42899;42900 49651;49652 49651 2 SVSSNVASVSPIPAGSK Unmodified 1585.8312 0.83115034 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 7.5 0.5 1 1 56.377 56.377 3 2.2732E-31 16860 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.31 94.466 128 78.651 61.619 75.133 110.38 66.14 120 83 65 74 111 65 1 1 1 1 1 1 9070 18588 2646 17892 42901;42902 49653;49654 49654 2 SVSSSSYR Unmodified 871.40356 0.40356022 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 8.67 3.09 1 1 1 28.881 28.881 2 0.0063253 5471 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.36 72.787 0 160.48 138 159.25 45.234 147.66 0 153 143 154 47 139 0 3 3 3 2 2 18289 18589 1423 17893 42903;42904;42905 49655;49656;49657 49655 3 SVSTPSDAGSQDSGDLGPLTR Unmodified 2045.9502 0.95015586 743 O88485;D3Z0M6 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 4 0 1 54.601 54.601 3 2.2826E-11 18441 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.574 60.736 30.006 7.5527 0 50.278 0 29.848 28 9 0 46 0 28 1 1 0 1 0 1 8210.8 18590 743 17894 42906 49658 49658 1 SVSTPSEAGSQDSGDGAVGSR Unmodified 1949.8563 0.85625547 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 2.5 0.5 1 1 38.407 38.407 3 4.4034E-11 11330 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.248 85.248 20.276 0 18.704 39.326 0 20.254 19 0 19 37 0 19 1 0 1 1 0 1 11476 18591 539 17895 42907;42908 49659;49660 49660 2 SVTDQEHPAADAEPR Unmodified 1621.7332 0.73322721 2565 Q8JZM4 Dner Delta and Notch-like epidermal growth factor-related receptor yes yes 0 0 0 0 2 0 1 32.684 32.684 3 0.0044325 8413 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 46.156 33.176 39.447 17.084 28.222 19.085 0 29.848 37 19 28 19 0 28 1 1 1 1 0 1 1411.9 18592 2565 17896 42909 49661 49661 1 SVTDSIRDEYAFLQK Unmodified 1770.8788 0.87882882 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 7.5 3.2 1 2 1 69.889 69.889 3;4 0.0011713 24745 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.038 41.558 257.76 222.59 199.83 306 374.65 296.36 242 224 204 296 380 287 3 4 2 3 4 3 38644 18593 815;2590 17897 42910;42911;42912;42913 49662;49663;49664;49665;49666 49665 5 SVTEQGAELSNEER Unmodified 1547.7063 0.70634376 1773 P63101;A0A2I3BQ03;D3YXN6;D3YXF4 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 2.83 3.21 5 3 2 1 1 41.562 41.562 2;3 2.6659E-123 11904 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 207.97 175.54 1806.2 1434 2028.2 1829 1719.5 2041.9 1704 1480 2034 1808 1770 1961 12 9 13 13 11 14 4117800 18594 1773 17898 42914;42915;42916;42917;42918;42919;42920;42921;42922;42923;42924;42925 49667;49668;49669;49670;49671;49672;49673;49674;49675;49676;49677;49678;49679;49680;49681;49682;49683;49684;49685;49686;49687 49670 21 SVTEQGAELSNEER Deamidation (N) 1548.6904 0.69035934 1773 P63101;A0A2I3BQ03;D3YXN6;D3YXF4 Ywhaz 14-3-3 protein zeta/delta yes no 0 1 0 0 1 0 3 42.905 42.905 2;3 6.5488E-217 12176 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 286.01 240.84 89.187 186.14 152.96 144.5 84.654 172.41 84 183 156 142 87 164 2 4 3 4 2 3 88793 18595 1773 17898 42926;42927;42928 49688;49689;49690;49691 49690 705 4 SVTLLVK Unmodified 758.49019 0.49019038 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 11.3 1.25 1 1 1 60.893 60.893 2 0.006129 16651 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.29 31.543 157.89 254.18 459.34 219.36 378.77 282.42 148 241 436 213 372 269 1 2 3 2 2 2 53530 18596 1826 17899 42929;42930;42931 49692;49693;49694;49695 49692 4 SVTNEDVTQEQLGGAK Unmodified 1674.8061 0.8060578 2873 Q99MN9;E9Q1J7;D3YZC1 Pccb Propionyl-CoA carboxylase beta chain, mitochondrial yes no 0 0 0 0 3.5 0.5 1 1 50.917 50.917 3 2.8338E-26 17121 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.31 85.207 48.89 0 78.667 25.915 0 59.696 46 0 74 28 0 56 1 0 1 1 0 1 6234.5 18597 2873 17900 42932;42933 49696;49697 49696 2 SVTQGFSFNILCVGETGIGK Unmodified 2113.0514 0.051390229 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 8.8 4.12 1 1 1 1 1 88.158 88.158 3 3.8326E-13 28394 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.66 93.261 59.961 7.9663 112.31 122.9 87.37 116.49 56 9 107 121 88 111 2 1 3 5 3 3 20136 18598 575 17901 42934;42935;42936;42937;42938 49698;49699;49700;49701;49702;49703 49701 6 SVTSNQSDGTQESCESPDVLDR Unmodified 2410.019 0.01904006 2687 Q9QYF9;Q8VCV2 Ndrg3 Protein NDRG3 yes no 0 0 0 0 1.5 0.5 1 1 48.357 48.357 3 6.1867E-35 15346 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 139.16 127.54 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 6530.3 18599 2687 17902 42939;42940 49704;49705 49705 2 SVTVTQK Unmodified 761.42832 0.42831841 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 39.391 39.391 2 0.0028479 10951 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.29 46.844 880.67 744.04 676.69 499.31 1006.7 901.89 828 760 666 500 1014 873 5 4 4 4 5 5 92030 18600 154 17903 42941;42942;42943;42944;42945 49706;49707;49708;49709;49710 49710 5 SVVALHNLINNK Unmodified 1320.7514 0.75138388 1459 P26516 Psmd7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 0 8 4.97 1 1 1 58.733 58.733 3 3.0465E-12 13655 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 119.76 92.022 108.3 110.2 99.896 74.315 381.86 29.848 102 112 102 74 381 28 2 2 2 1 2 1 46212 18601 1459 17904 42946;42947;42948 49711;49712;49713 49713 3 SVVDSLDIESMTIEDEYSGPK Unmodified 2313.057 0.056988696 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 4 0 1 83.928 83.928 4 0.00048122 31872 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.587 28.995 0 9.576 0 9.837 0 20.254 0 9 0 9 0 19 0 1 0 1 0 1 1423.2 18602 2080 17905 42949 49714 49714 1 SVVEFLQGYIGIPHGGFPEPFR Unmodified 2445.2481 0.2481162 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 11 0 2 93.752 93.752 3;4 4.1713E-12 30390 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.807 62.553 0 20.216 0 30.604 29.288 20.254 0 19 0 28 28 19 0 1 0 1 1 1 11733 18603 974 17906 42950;42951 49715;49716;49717 49716 3 SVVIGGLFPGIQYR Unmodified 1504.8402 0.84019889 380 A0A2I3BQB9;E9Q6A0;Q19AB2;A0A2I3BR72;Q7TPD3;A0A338P6D2 Robo2 Roundabout homolog 2 yes no 0 0 0 0 11.5 0.5 1 1 80.795 80.795 2;3 8.8942E-05 22183 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.806 53.997 59.835 28.121 18.769 30.604 0 40.508 56 28 19 28 0 38 2 1 1 1 0 2 10707 18604 380 17907 42952;42953 49718;49719 49719 2 SVVLMSHLGRPDGVPMPDK Unmodified 2034.0391 0.039051403 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 9 0 1 61.617 61.617 4 2.4604E-05 18681 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.556 45.067 108.41 69.497 115.39 0 0 127.92 102 74 111 0 0 120 1 1 1 0 0 1 11017 18605 1334 17908 42954 49720 49720 1 SVVMTPVPLFSK Unmodified 1303.721 0.72099495 171 A0A0R4J0F6;Q99KY4;F7BG02 Gak Cyclin-G-associated kinase yes no 0 0 0 0 11 0 1 79.061 79.061 3 0.0023864 24185 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.898 26.952 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18606 171 17909 42955 49721 49721 1 SVVNLADVIYK Unmodified 1219.6812 0.68123863 2292 Q7TQG7;Q9R1V4 Adam11 Disintegrin and metalloproteinase domain-containing protein 11 yes no 0 0 0 0 10.5 2.5 1 1 76.784 76.784 2;3 0.0021972 26638 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.625 47.547 88.202 71.392 83.523 137.11 0 39.442 83 74 83 130 0 37 2 2 1 2 0 1 7292.3 18607 2292 17910 42956;42957 49722;49723 49722 2 SVVNLVDSIYK Unmodified 1235.6762 0.67615325 3318 Q9R1V7 Adam23 Disintegrin and metalloproteinase domain-containing protein 23 yes yes 0 0 0 0 10 2.16 1 1 1 77.979 77.979 2 1.0007E-07 27149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.61 76.418 94.605 38.738 187.68 71.854 90.474 126.4 89 37 179 75 93 121 2 1 3 2 2 2 13573 18608 3318 17911 42958;42959;42960 49724;49725;49726 49724 3 SVVPGGGAVEAALSIYLENYATSMGSR Unmodified 2698.3272 0.32723074 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 10 0.707 1 2 1 102.8 102.8 3;4 4.2643E-17 33210 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.404 69.309 45.001 12.875 0 24.597 4.0901 20.137 42 14 0 23 5 19 2 1 0 3 1 1 4275.5 18609 1356 17912 42961;42962;42963;42964 49727;49728;49729;49730 49728 4 SVVQPGEGTADER Unmodified 1343.6317 0.63172225 319 A0A1W2P6S9;E9PWP6;F6TZK4;F6Y0S3;F6VBV0;F6VBT9;F6VBR4;Q99NE5 Rims1 Regulating synaptic membrane exocytosis protein 1 yes no 0 0 0 0 3 0 1 36.958 36.958 2 0.00046383 10693 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.397 61.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1235.8 18610 319 17913 42965 49731 49731 1 SVVTEEFNGSDWER Deamidation (N) 1654.7111 0.71109479 2987 Q9CXS4 Cenpv Centromere protein V yes yes 0 1 0 0 2.5 0.5 1 1 65.163 65.163 3 0.00026717 23501 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.175 58.211 29.856 67.147 0 39.766 55.759 28.824 28 65 0 37 56 28 1 2 0 1 2 1 5808.4 18611 2987 17914 42966;42967 49732;49733 49733 1037 2 SVVVAEDGSR Unmodified 1017.5091 0.50908792 1740 P62812;A0A0U1RPE4;Q8BHJ7 Gabra1;Gabra5 Gamma-aminobutyric acid receptor subunit alpha-1;Gamma-aminobutyric acid receptor subunit alpha-5 yes no 0 0 0 0 6.67 4.5 1 1 1 37.905 37.905 2 4.3019E-05 10622 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.53 78.273 0 57.634 193.37 125.41 62.55 196.49 0 56 185 120 65 186 0 1 2 2 1 3 19605 18612 1740 17915 42968;42969;42970 49734;49735;49736 49735 3 SVWSALSR Unmodified 904.47667 0.47666558 2040 Q59J78;A0A286YDL9;A0A286YE33 Ndufaf2 Mimitin, mitochondrial yes no 0 0 0 0 10 0 1 58.49 58.49 2 0.015932 15424 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.716 48.903 99.227 111.41 0 128.91 119.6 0 93 111 0 120 120 0 1 1 0 1 1 0 10476 18613 2040 17916 42971 49737 49737 1 SVYVDDDSEAAGNR Unmodified 1496.6379 0.63792984 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 2 0 1 42.189 42.189 2 0.00062173 12816 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.338 61.24 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1627.4 18614 1127 17917 42972 49738 49738 1 SWALYEDEDVIR Unmodified 1494.6991 0.69907354 3193 Q9ESJ4 Nckipsd NCK-interacting protein with SH3 domain yes yes 0 0 0 0 5 0 1 70.042 70.042 2 8.3045E-12 25371 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.51 81.111 24.679 0 0 30.368 12.566 19.895 23 0 0 28 14 19 1 0 0 1 1 1 3550.2 18615 3193 17918 42973 49739 49739 1 SWDIFFR Unmodified 969.47085 0.47085192 2074 Z4YJV4;Q60597;Q5SVY0;Q5SVY1 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 10.7 1.7 1 1 1 80.631 80.631 2 0.0085835 25400 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.2 69.314 68.833 296.88 293.82 50.278 240.51 274.87 65 288 285 46 237 263 2 3 2 1 2 2 57493 18616 2074 17919 42974;42975;42976 49740;49741;49742 49741 3 SWDSEEILEGYK Unmodified 1454.6565 0.65654002 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5 0 1 72.608 72.608 3 0.00020416 26394 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.611 54.504 49.129 0 38.565 27.424 46.856 0 46 0 37 28 46 0 1 0 1 1 1 0 26200 18617 2441 17920 42977 49743 49743 1 SWDTKPGLLVGVPGMVK Unmodified 1782.9702 0.97022678 2831 Q99JP7;H3BKA5 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes no 0 0 0 1 10 0 1 76.037 76.037 3 0.029892 23158 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 39.904 21.492 19.912 38.297 47.374 0 38.702 0 19 38 46 0 37 0 1 1 1 0 1 0 3129.3 18618 2831 17921 42978 49744 49744 1 SWDTNLIECNLDQELK Unmodified 1976.915 0.91495633 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7 3.03 2 2 1 81.168 81.168 3;4 3.6365E-33 30736 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 148.33 111.69 99.218 179.57 123.43 102.94 91.423 233.26 93 177 121 102 93 223 2 4 2 3 2 5 45952 18619 1382 17922 42979;42980;42981;42982;42983 49745;49746;49747;49748;49749 49745 5 SWDVETATELLLSN Unmodified 1576.7621 0.76206772 1687 P61087;A0A0J9YUI1;A0A0J9YU07;Q3V3R8;D3Z4U3 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 8 3.56 1 1 1 101.21 101.21 2 6.4485E-14 37355 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.342 60.801 0 0 6.492 0 0 6.396 0 0 6 0 0 6 0 0 1 0 0 1 522.64 18620 1687 17923 42984;42985;42986 49750;49751;49752 49751 3 SWEDVDPAVCSLDEQLK Unmodified 1989.899 0.89897191 2483 Q8C052;A0A1D5RLY6;A0A1D5RMG7;A0A1D5RML0;A0A1D5RMF1 Map1s Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain yes no 0 0 0 0 4 0 1 78.043 78.043 3 6.9223E-05 29149 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.949 48.461 0 0 30.296 0 0 29.848 0 0 28 0 0 28 0 0 1 0 0 1 2477.9 18621 2483 17924 42987 49753 49753 1 SWEEAESQCR Unmodified 1280.5092 0.50916428 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 3 0.816 1 1 1 41.583 41.583 2 1.9023E-08 12264 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 146.88 118.9 157.66 35.121 162.21 131.22 64.031 97.311 148 37 158 130 65 93 3 1 3 3 1 2 28048 18622 2125 17925 42988;42989;42990 49754;49755;49756 49756 3 SWEEQMAEVGR Unmodified 1320.5768 0.57684991 208 A0A0R4J1N9;P40630 Tfam Transcription factor A, mitochondrial yes no 0 0 0 0 4 0 1 58.535 58.535 2 0.040568 20484 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.252 20.523 39.613 17.545 0 0 37.054 47.979 37 19 0 0 37 46 1 1 0 0 1 1 6961.2 18623 208 17926 42991 49757 49757 1 SWLHNDLK Unmodified 1011.5138 0.51377937 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 9 0 1 51.276 51.276 3 0.025222 13734 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.064 27.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18624 2736 17927 42992 49758 49758 1 SWLQQSYQAVK Unmodified 1336.6776 0.67755023 2337 Q80Y55 Bsdc1 BSD domain-containing protein 1 yes yes 0 0 0 0 11 0 1 64.084 64.084 3 0.042417 17393 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.083 21.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18625 2337 17928 42993 49759 49759 1 SWNETFHAR Unmodified 1146.5207 0.52065566 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 0 7 0 1 42.679 42.679 3 0.00058712 11110 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.538 52.916 98.583 59.973 151.92 92.595 0 99.138 93 65 148 93 0 93 1 1 1 1 0 1 9888.9 18626 3156 17929 42994 49760 49760 1 SWQNVYCVLR Unmodified 1323.6394 0.63939059 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 9.5 0.5 1 1 68.431 68.431 2 5.6245E-05 19811 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.53 19.446 0 57.96 97.149 80.046 121.84 0 0 56 93 74 120 0 0 1 1 1 2 0 25416 18627 2186 17930 42995;42996 49761;49762 49762 2 SWSLVTFR Unmodified 994.52362 0.52361577 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 70.104 70.104 2 0.03951 20602 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.903 34.974 99.359 31.911 45.297 46.231 71.616 106.69 93 37 46 46 74 102 1 1 1 1 1 1 6086.7 18628 3266 17931 42997 49763 49763 1 SWTWPEGPEQTLHCEAR Unmodified 2082.9218 0.92177304 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 6 0 1 61.736 61.736 3 4.8573E-06 20946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.829 69.739 59.689 34.714 75.985 38.156 46.807 77.548 56 37 74 37 46 74 1 1 2 1 1 2 5855.8 18629 2077 17932 42998 49764;49765 49764 2 SWVFQGYSLTGPSVYELIR Unmodified 2201.1157 0.11570504 2359 Q8BFQ8 Pddc1 Parkinson disease 7 domain-containing protein 1 yes yes 0 0 0 0 11 0.816 1 1 1 92.797 92.797 3 0.00028446 30239 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.553 35.852 9.535 0 20.51 0 0 9.594 9 0 19 0 0 9 1 0 1 0 0 1 6675.2 18630 2359 17933 42999;43000;43001 49766;49767;49768 49766 3 SWVIDQK Unmodified 874.45487 0.45486751 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 7.5 0.5 1 1 58.002 58.002 2;3 0.018664 18417 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.92 50.679 108.52 69.815 144.47 26.827 179.26 104.95 102 74 139 28 176 102 1 1 2 1 2 1 10441 18631 2999 17934 43002;43003 49769;49770 49769 2 SWVNAVAFDPYTTR Unmodified 1625.7838 0.78380622 918 E9Q6J8;Q08274 Dmwd Dystrophia myotonica WD repeat-containing protein yes no 0 0 0 0 9 0 1 75.337 75.337 2 0.0339 25124 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.829 22.81 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18632 918 17935 43004 49771 49771 1 SWVSLYCVLSK Unmodified 1340.6799 0.67985842 842 E9PX29;Q91ZE6;E9PZC2 Sptbn4 yes no 0 0 0 0 12 0 2 85.084 85.084 2;3 0.00022586 23881 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.441 61.768 30.044 39.368 0 0 19.874 78.884 28 37 0 0 19 74 1 1 0 0 1 1 6121.5 18633 842 17936 43005;43006 49772;49773 49773 2 SWWQVEK Unmodified 961.46577 0.46576654 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 9 0 1 65.078 65.078 3 0.038857 20328 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.166 13.165 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 5736.3 18634 2300 17937 43007 49774 49774 1 SYASETVVR Unmodified 1010.5033 0.50327426 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 5 0.816 1 1 1 39.709 39.709 2 0.00097535 11354 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.81 78.237 188 0 221.95 169.8 168.99 351.22 176 0 213 166 176 334 2 0 3 2 2 3 73137 18635 1304 17938 43008;43009;43010 49775;49776;49777 49775 3 SYASLFSK Unmodified 901.45453 0.45453316 3375 Q9Z1F9 Uba2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 0 10.5 0.5 1 1 64.623 64.623 2;3 0.0066967 17506 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.657 55.849 29.904 27.776 0 0 57.278 37.808 28 28 0 0 56 37 1 1 0 0 1 1 3086.2 18636 3375 17939 43011;43012 49778;49779 49779 2 SYAVVGVPPDVMGIGPAYAIPAALQK Unmodified 2583.3771 0.37708146 2795 Q921H8;H3BKL5;Q8VCH0 Acaa1a;Acaa1b 3-ketoacyl-CoA thiolase A, peroxisomal;3-ketoacyl-CoA thiolase B, peroxisomal yes no 0 0 0 0 10 0 1 92.938 92.938 4 0.053637 30266 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 23.675 7.9094 0 0 0 0 28.291 29.041 0 0 0 0 28 28 0 0 0 0 1 1 1175.3 18637 2795 17940 43013 49780 49780 1 SYCAEIAHNVSSK Unmodified 1464.6667 0.66672755 1756 P62911 Rpl32 60S ribosomal protein L32 yes yes 0 0 0 0 6 0 1 46.738 46.738 3 0.0029382 13804 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.377 29.527 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18638 1756 17941 43014 49781 49781 1 SYDALVHFGK Unmodified 1135.5662 0.56620887 272 A0A1D5RLF1;Q8BGH4 Reep1 Receptor expression-enhancing protein 1 yes no 0 0 0 0 9 0 1 60.279 60.279 3 0.027156 18049 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.308 20.072 0 48.944 0 0 77.404 0 0 46 0 0 74 0 0 1 0 0 1 0 2651.8 18639 272 17942 43015 49782 49782 1 SYDVPPPPMEPDHPFYSNISK Unmodified 2416.1045 0.10454801 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 6 0.816 2 2 2 66.767 66.767 3;4 5.5917E-11 23826 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.896 76.282 238.12 273.24 218.01 215.62 348.35 309.62 223 269 222 214 352 298 5 6 4 5 6 6 55880 18640 3126 17943 43016;43017;43018;43019;43020;43021 49783;49784;49785;49786;49787;49788;49789;49790;49791 49785 9 SYDYQSVCDPGAAPK Unmodified 1656.709 0.7089863 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 8.5 4.5 1 1 52.286 52.286 3 0.0065449 17303 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.05 22.387 118.88 0 37.196 137.67 116.89 67.251 111 0 37 130 120 65 2 0 1 2 2 1 8334.8 18641 882 17944 43022;43023 49792;49793 49793 2 SYEAQDPEIASLSGK Unmodified 1593.7522 0.75223132 1178 O35127 Grcc10 Protein C10 yes yes 0 0 0 0 4 0 1 60.429 60.429 3 0.0002936 21192 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.335 45.382 0 47.859 64.904 57.34 0 59.696 0 46 65 56 0 56 0 1 1 1 0 1 5131.9 18642 1178 17945 43024 49794 49794 1 SYEAYVLNIIR Unmodified 1339.7136 0.71360139 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 0 9.6 2.46 1 2 1 1 1 1 1 2 79.689 79.689 2;3 4.4681E-66 27906 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 220.39 157.81 3340 2367.4 2631.6 2918 3389.3 3133.8 3138 2471 2612 2844 3461 3014 12 11 11 14 12 14 644600 18643 1369 17946 43025;43026;43027;43028;43029;43030;43031;43032;43033;43034 49795;49796;49797;49798;49799;49800;49801;49802;49803;49804;49805;49806;49807;49808;49809;49810 49802 16 SYEDPYCDDR Unmodified 1318.4772 0.47719545 512 A2AS47;A2AS45;Q68FH0 Pkp4 Plakophilin-4 yes no 0 0 0 0 1 0 1 42.749 42.749 2 0.0039637 12042 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.643 64.338 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18644 512 17947 43035 49811 49811 1 SYELPDGQVITIGNER Deamidation (N) 1790.8687 0.86865806 1673;1781;1791;2366 P60710;E9Q1F2;E9Q5F4;P63260;P68033;P68134;P62737;P63268;A0A0U1RQ96;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 1 0 0 6.73 3.87 2 4 3 2 4 75.157 75.157 2;3 2.6542E-24 28451 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 140.22 108.99 177.49 264.08 299.76 121.35 133.88 197.21 167 260 287 120 130 185 6 10 5 3 4 4 173810 18645 1673;1781;1791;2366 17948 43036;43037;43038;43039;43040;43041;43042;43043;43044;43045;43046;43047;43048;43049;43050 49812;49813;49814;49815;49816;49817;49818;49819;49820;49821;49822;49823;49824;49825;49826;49827;49828 49819 644 17 SYELPDGQVITIGNER Unmodified 1789.8846 0.88464248 1673;1781;1791;2366 P60710;E9Q1F2;E9Q5F4;P63260;P68033;P68134;P62737;P63268;A0A0U1RQ96;Q8BFZ3 Actb;Actg1;Actc1;Acta1;Acta2;Actg2;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle;Beta-actin-like protein 2 no no 0 0 0 0 6.18 2.37 2 3 3 2 1 70.559 70.559 2;3 1.4112E-90 26231 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 219.92 188.16 1192 986.02 1216.8 1085.9 1339.1 1365 1120 1012 1192 1045 1353 1314 12 12 12 10 11 12 1719000 18646 1673;1781;1791;2366 17948 43051;43052;43053;43054;43055;43056;43057;43058;43059;43060;43061 49829;49830;49831;49832;49833;49834;49835;49836;49837;49838;49839;49840;49841;49842;49843;49844;49845;49846 49830 18 SYELQESNVR Unmodified 1223.5782 0.57823012 112 A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;A0A0J9YUV6;A0A0J9YVA6 Sept11 Septin-11 yes no 0 0 0 0 4.5 0.5 1 1 42.854 42.854 2 4.5845E-09 12820 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 155.57 92.145 0 0 0 94.712 78.283 0 0 0 0 88 79 0 0 0 0 1 1 0 17340 18647 112 17949 43062;43063 49847;49848 49847 2 SYEPQEDPGVK Unmodified 1247.567 0.56699673 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 6.67 4.5 1 1 1 45.614 45.614 2 1.2316E-07 14735 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.86 73.499 48.579 64.611 116.22 65.319 62.993 117.82 46 65 111 65 65 112 2 2 2 2 2 2 17529 18648 246 17950 43064;43065;43066 49849;49850;49851 49849 3 SYETWIGVYTAK Unmodified 1416.6925 0.6925316 2870 Q99M71;A0A1Y7VKS9 Epdr1 Mammalian ependymin-related protein 1 yes no 0 0 0 0 11 2 1 1 73.58 73.58 2;3 0.00041402 24383 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.456 49.763 39.564 27.124 144.58 130.59 200.44 202.15 37 28 139 130 204 195 1 1 1 1 2 2 12018 18649 2870 17951 43067;43068 49852;49853 49852 2 SYFSSFTDDIISQPMLK Unmodified 1977.9394 0.93938016 3012 Q9CZW5 Tomm70a Mitochondrial import receptor subunit TOM70 yes yes 0 0 0 0 8 0 1 88.868 88.868 3 4.6243E-06 32151 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.559 60.76 6.3609 0 12.952 0 0 12.792 6 0 12 0 0 12 1 0 1 0 0 1 2925.9 18650 3012 17952 43069 49854 49854 1 SYGANFSWNK Unmodified 1172.5251 0.52507234 976 Q9CXZ1;E9QPX3 Ndufs4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial yes no 0 0 0 0 9 0 1 60.892 60.892 2 0.00075872 18258 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.616 54.615 78.652 62.636 73.034 64.632 109.51 105.61 74 65 74 65 111 102 1 1 1 1 1 1 8191.3 18651 976 17953 43070 49855 49855 1 SYGIPFIETSAK Unmodified 1311.6711 0.67106787 1505 P32883 Kras GTPase KRas;GTPase KRas, N-terminally processed no no 0 0 0 0 8.5 0.5 1 1 72.758 72.758 3 6.375E-05 23899 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.001 45.297 69.329 0 118.52 27.711 0 0 65 0 111 28 0 0 1 0 2 1 0 0 16444 18652 1505 17954 43071;43072 49856;49857 49857 2 SYGIPYIETSAK Unmodified 1327.666 0.66598249 2126 Q61411 Hras GTPase HRas;GTPase HRas, N-terminally processed yes yes 0 0 0 0 7.5 0.5 1 1 66.314 66.314 3 6.375E-05 21565 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.001 46.286 48.972 0 135.18 117.46 85.217 135.08 46 0 130 111 83 129 1 0 2 1 1 2 15178 18653 2126 17955 43073;43074 49858;49859 49859 2 SYIEGYVPSQADVAVFEAVSGPPPADLCHALR Unmodified 3414.6554 0.65544117 1247 O70251;G3UX43;G3UZ47 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 0 6 0.816 1 1 1 85.886 85.886 4 0.00037113 32757 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 34.829 29.049 19.035 19.571 39.986 0 9.414 20.254 18 19 37 0 9 19 2 1 2 0 1 1 9271 18654 1247 17957 43075;43076;43077 49860;49861;49862 49860 3 SYIITGGLGGFGLELAR Unmodified 1722.9305 0.93047046 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 10 0.816 1 1 1 86.679 86.679 2;3 1.3758E-13 27899 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.417 57.696 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18655 1412 17958 43078;43079;43080 49863;49864;49865 49864 3 SYIQEVVQYIK Unmodified 1368.7289 0.7289171 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 10 1.87 1 1 1 1 82.64 82.64 2;3 9.7583E-06 28431 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.522 60.257 59.903 104.97 53.354 117.28 45.992 109.8 56 102 55 111 46 103 2 2 1 3 1 2 16966 18656 3373 17959 43081;43082;43083;43084 49866;49867;49868;49869 49867 4 SYIYSGSHDGHINYWDSETGENDSFSGK Unmodified 3151.3068 0.30676588 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 5 0 1 61.305 61.305 4 1.7816E-12 21315 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.282 60.378 20.27 0 19.614 18.899 37.175 19.193 19 0 19 19 37 19 1 0 1 1 1 1 3807.2 18657 1263 17960 43085 49870 49870 1 SYKPVYWSPSSR Unmodified 1455.7147 0.71466402 2413 Q8BIJ6;E9PWN2;E9PWN3 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 1 12 0 1 52.319 52.319 3 0.051404 11199 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.337 25.537 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 3159 18658 2413 17961 43086 49871 49871 1 SYLEEAPER Unmodified 1092.5088 0.50875357 1037 F8VQN6;Q8R4H2 Arhgef12 Rho guanine nucleotide exchange factor 12 yes no 0 0 0 0 3 0 1 44.562 44.562 2 0.050636 14112 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.563 34.415 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18659 1037 17962 43087 49872 49872 1 SYLFLLSSDYER Unmodified 1491.7246 0.72456001 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 9.5 0.5 1 1 80.472 80.472 2 0.00090965 27589 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.286 40.572 137.68 65.854 67.877 134.54 128.18 47.201 129 65 65 129 130 46 2 1 1 2 2 1 10504 18660 816 17963 43088;43089 49873;49874 49873 2 SYLLSMGIANPVTR Unmodified 1520.8021 0.80209882 2764 Q91XD6 Vps36 Vacuolar protein-sorting-associated protein 36 yes yes 0 0 0 0 12 0 1 74.051 74.051 2 0.00012067 19362 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.416 36.111 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18661 2764 17964 43090 49875 49875 1 SYLNIWSELQAYIR Unmodified 1754.8992 0.89917033 2996 Q9CYT6;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2 yes no 0 0 0 0 12 0.816 1 1 1 99.001 99.001 3 0.0012698 28246 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.071 36.313 68.357 38.73 20.137 29.145 81.75 14.531 64 37 19 28 79 14 3 1 1 2 2 1 6445.6 18662 2996 17965 43091;43092;43093 49876;49877;49878 49877 3 SYLPGSGLTTTR Unmodified 1251.6459 0.64591575 504 D3Z781;E9QAU4;A2AQ25 Etl4;Skt Sickle tail protein yes no 0 0 0 0 8 0 1 53.47 53.47 2 0.0034011 15494 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.283 30.163 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 2437.2 18663 504 17966 43094 49879 49879 1 SYLQDPIWR Unmodified 1176.5928 0.59275797 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 7 0 1 66.113 66.113 2 0.0034275 22102 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.601 55.449 108.74 40.207 84.013 63.577 130.81 65.557 102 46 83 65 130 65 1 1 1 1 1 1 6805.4 18664 2057 17967 43095 49880 49880 1 SYLSGMPECK Unmodified 1170.5049 0.50493052 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 7 0 1 55.77 55.77 2 0.0059147 17247 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.165 44.181 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2974 18665 1836 17968 43096 49881 49881 1 SYLTPVRDEESESQR Unmodified 1794.8384 0.83842057 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 1 5 0 1 42.962 42.962 3 0.036827 12559 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.014 24.877 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18666 3131 17969 43097 49882 49882 1 SYLYFTQFK Unmodified 1195.5914 0.59136099 2896 Q9CPT4 Mydgf Myeloid-derived growth factor yes yes 0 0 0 0 8 4.97 1 1 1 74.967 74.967 3 0.00065096 22089 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.087 51.465 59.846 36.703 9.6355 60.115 63.841 98.629 56 37 9 55 65 93 2 1 1 1 2 2 36931 18667 2896 17970 43098;43099;43100 49883;49884;49885 49884 3 SYMSPER Unmodified 868.3749 0.37490263 1500 P31938;A0A1W2P7V9 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 0 5 0 1 36.013 36.013 2 0.034519 9260 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.671 64.823 59.271 63.772 83.252 54.519 91.825 85.858 56 65 83 56 93 83 1 1 1 1 1 1 6657.5 18668 1500 17971 43101 49886 49886 1 SYNLVVAK Unmodified 892.50182 0.5018177 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4;A0A1W2P896;A0A1W2P7H7 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 9 0 1 56.467 56.467 2 0.030758 16254 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.877 36.259 296.67 114.8 175.64 258.69 391.99 209.9 278 120 176 253 393 202 2 1 1 2 2 1 13074 18669 1250 17972 43102 49887;49888 49888 2 SYNNPPCEENLFSDYISEVER Unmodified 2561.1016 0.10164748 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 3.5 0.5 1 1 82.026 82.026 3 1.1851E-05 30961 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.769 38.754 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 2587 18670 1089 17973 43103;43104 49889;49890 49890 2 SYQDPSNAQFLESIR Unmodified 1753.8271 0.8271276 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 0 0 0 9 4 1 1 65.195 65.195 3 0.00060555 23015 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.211 40.258 29.642 36.76 36.442 27.766 35.411 58.686 28 37 37 28 37 56 1 1 1 1 1 1 8091.2 18671 3000 17974 43105;43106 49891;49892 49891 2 SYQFWDTQPVPK Unmodified 1494.7143 0.71432967 1249 O70310 Nmt1 Glycylpeptide N-tetradecanoyltransferase 1 yes yes 0 0 0 0 8 0 1 68.555 68.555 3 0.021421 22628 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.209 21.256 0 0 58.09 56.161 84.238 0 0 0 56 56 83 0 0 0 1 1 1 0 5079.7 18672 1249 17975 43107 49893 49893 1 SYRPELIR Unmodified 1032.5716 0.5716286 3159 Q9DD18 Dtd1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 0 1 7 0 1 41.48 41.48 3 0.014633 10517 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.064 31.747 147.84 105.97 129.52 90.723 170.51 0 139 111 130 93 167 0 1 1 1 1 1 0 7067.1 18673 3159 17976 43108 49894 49894 1 SYSPELIVHPVLDSSNAVEEVEK Unmodified 2540.2646 0.26461371 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 4 0 1 72.53 72.53 4 1.9816E-05 26499 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.645 32.353 0 0 0 49.593 36.424 0 0 0 0 46 37 0 0 0 0 1 1 0 2001.9 18674 1142 17977 43109 49895 49895 1 SYSRFEEEDDDDDFPAPADGYYR Unmodified 2758.0943 0.094313493 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 1 3 0 1 61.526 61.526 3 2.2669E-11 21908 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.853 64.66 9.612 8.9279 0 0 9.414 0 9 9 0 0 9 0 1 1 0 0 1 0 2235.4 18675 3216 17978 43110 49896 49896 1 SYSSGGEDGYVR Unmodified 1275.5368 0.53675924 3290 Q9QZD9 Eif3i Eukaryotic translation initiation factor 3 subunit I yes yes 0 0 0 0 3 0 1 38.529 38.529 2 1.325E-11 11361 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.63 100.63 20.054 47.326 15.88 39.009 25.837 48.299 19 46 19 37 28 46 1 1 1 1 1 1 3861.3 18676 3290 17979 43111 49897 49897 1 SYSSSSGSLMPSLENLDLSQVAAISNDLK Unmodified 3012.4598 0.45976105 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 10.5 2.5 1 1 95.418 95.418 3;4 0.00021132 38242 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.057 29.743 48.93 55.875 34.26 48.816 5.23 69.29 46 56 37 46 5 65 1 1 2 1 1 1 6414.3 18677 1329 17980 43112;43113 49898;49899 49899 2 SYTLDSLGNPSAYR Acetyl (Protein N-term) 1584.742 0.74200098 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 1 0 0 0 4 1 1 1 71.933 71.933 2 8.7534E-31 26779 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 79.659 47.788 0 29.156 38.035 18.5 9.414 0 0 28 37 19 9 0 0 2 1 1 1 0 14822 18678 154 17981 43114;43115 49900;49901 49900 2 SYTPGIGGDSAQLAQR Acetyl (Protein N-term) 1661.8009 0.80091285 1254 Q8BH40;O70439 Stx7 Syntaxin-7 yes no 1 0 0 0 3 0 1 57.712 57.712 2 1.9351E-07 20217 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.182 68.975 29.952 18.196 0 0 19.564 9.0357 28 19 0 0 19 9 1 1 0 0 1 1 6844.2 18679 1254 17982 43116 49902 49902 1 SYVDPSTDER Unmodified 1167.5044 0.50439648 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 2.5 0.5 1 1 39.112 39.112 2 2.2097E-08 11592 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 145.46 129.85 79.059 0 57.633 57.471 16.073 89.085 74 0 56 56 19 84 2 0 2 2 1 2 11794 18680 3266 17983 43117;43118 49903;49904 49904 2 SYVTTSTR Unmodified 913.45051 0.45051041 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 0 13 0 1 32.57 32.57 2 0.015019 7832 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.368 53.31 69.125 123.02 0 118.95 126.25 124.32 65 120 0 111 130 120 1 1 0 1 1 1 11624 18681 1423 17984 43119 49905 49905 1 SYYNVVLQNILETEHEYSK Unmodified 2328.1274 0.12739194 3191;192 A0A0R4J0X8;A0A1B0GRS3;Q9ES28;D3Z0V2 Arhgef7 Rho guanine nucleotide exchange factor 7 no no 0 0 0 0 8 0 1 84.515 84.515 3 0.022801 30192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.753 23.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18682 192;3191 17985 43120 49906 49906 1 TAAANAAAGAAENAFR Unmodified 1475.7117 0.71170391 929 E9Q855;Q3UXS0;O35609 Scamp3 Secretory carrier-associated membrane protein 3 yes no 0 0 0 0 5 0 1 55.702 55.702 3 0.00029657 18643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.813 47.864 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2555 18683 929 17986 43121 49907 49907 1 TAACLAAGNTVVIKPAQVTPLTALK Unmodified 2507.4145 0.4145296 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 1 10 0 1 73.805 73.805 5 0.0038381 22309 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.914 23.809 88.477 52.729 53.158 85.845 90.714 76.295 83 56 56 83 93 74 1 1 1 1 1 1 4315.6 18684 2633 17987 43122 49908 49908 1 TAAENDFVTLK Unmodified 1207.6085 0.60846762 662 CON__P35908v2;CON__P35908 yes no 0 0 0 0 5 0 1 61.329 61.329 3 0.016035 21262 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.592 21.375 29.952 18.196 0 20.767 0 20.254 28 19 0 19 0 19 1 1 0 1 0 1 2260.9 + 18685 662 17988 43123 49909 49909 1 TAAFLLPILSQIYADGPGEALR Unmodified 2315.2525 0.25253288 2146 Q62167 Ddx3x ATP-dependent RNA helicase DDX3X yes yes 0 0 0 0 9.25 4.82 1 1 1 1 108.12 108.12 3 2.9839E-22 29600 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121 104.4 5.34 10.28 29.773 15.646 23.251 29.718 5 10 28 15 23 28 1 2 4 2 3 2 21629 18686 2146 17989 43124;43125;43126;43127 49910;49911;49912;49913;49914;49915;49916 49914 7 TAAFVLAVLSQVEPANK Unmodified 1756.9723 0.97233527 2481 Q8R3C7;Q8BZY3 Ddx19b yes no 0 0 0 0 12 0 1 98.499 98.499 3 0.00092668 28184 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.559 31.457 20.223 12.787 44.575 0 14.329 18.779 19 14 42 0 14 18 1 2 2 0 1 2 989.75 18687 2481 17990 43128 49917;49918 49918 2 TAAGYGDFSEPLEVTTNTVPSR Unmodified 2311.0968 0.096820096 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 4.5 0.5 1 1 68.816 68.816 3 5.1987E-16 24796 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.837 80.965 49.273 35.894 0 60.71 26.499 0 46 38 0 56 28 0 1 2 0 1 1 0 7138.1 18688 1880 17991 43129;43130 49919;49920 49920 2 TAALPTFR Unmodified 875.4865 0.48650199 2713 Q8VEK0;D3YVV1;Q8BHG3 Tmem30a;Tmem30b Cell cycle control protein 50A;Cell cycle control protein 50B yes no 0 0 0 0 9 0 1 53.882 53.882 2 0.060762 15042 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.589 4.0424 59.466 43.807 67.402 0 104.41 66.31 56 46 65 0 102 65 1 1 1 0 1 1 13740 18689 2713 17992 43131 49921 49921 1 TAAPSPDR Unmodified 813.39808 0.39808091 1274 O88703 Hcn2 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 yes yes 0 0 0 0 4 0 1 26.176 26.176 2 0.052325 5195 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.682 22.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18690 1274 17993 43132 49922 49922 1 TAAVCVAK Unmodified 818.43202 0.43202358 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0;H3BJ06 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 9.25 2.28 1 1 1 1 43.581 43.581 2 0.0027408 11627 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.67 63.953 301.75 368.4 371.47 412 530.98 343.34 283 370 376 404 537 329 2 3 3 3 4 2 76460 18691 1203;3123 17994 43133;43134;43135;43136 49923;49924;49925;49926 49923 4 TAAVSAIATK Unmodified 931.53385 0.53384611 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 8.71 3.73 1 1 1 1 1 1 1 50.426 50.426 2;3 7.8317E-20 10380 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 145.25 94.641 782.22 593.92 471.83 627.53 702.83 841.26 734 610 473 607 721 804 5 4 5 5 6 6 154860 18692 1223 17995 43137;43138;43139;43140;43141;43142;43143 49927;49928;49929;49930;49931;49932;49933;49934;49935;49936;49937 49936 11 TAAYVNAIEK Unmodified 1078.5659 0.56587452 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 54.984 54.984 3 9.7506E-05 17805 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.113 48.22 611.56 361.83 461.13 762.69 758.98 728.01 574 367 455 736 783 702 3 2 3 4 4 3 112470 18693 1458 17996 43144;43145;43146 49938;49939;49940;49941 49938 4 TAAYVNAIEK Deamidation (N) 1079.5499 0.5498901 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 1 0 0 6 0 1 52.529 52.529 3 0.00052795 16537 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.693 45.803 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18694 1458 17996 43147 49942 49942 540 1 TACAINK Unmodified 776.38507 0.38507338 2321 Q80VD1;Q3TJZ6 Fam98b;Fam98a Protein FAM98B;Protein FAM98A yes no 0 0 0 0 8 0 1 38.367 38.367 2 0.02731 8478 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.635 39.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18695 2321 17997 43148 49943 49943 1 TADDGCLENAPDTAEFSR Unmodified 1967.8167 0.81669885 1363 P12961 Scg5 Neuroendocrine protein 7B2;N-terminal peptide;C-terminal peptide yes yes 0 0 0 0 2 0.816 1 1 1 54.444 54.444 3 2.4465E-09 18666 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.505 59.639 39.701 0 20.558 0 19.874 20.254 37 0 19 0 19 19 1 0 1 0 1 1 18682 18696 1363 17998 43149;43150;43151 49944;49945;49946 49946 3 TADGIVSHLK Unmodified 1039.5662 0.56620887 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 6.5 0.5 1 1 50.881 50.881 3 0.0004156 14814 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.298 42.137 99.464 113.42 0 170.36 124.24 173.41 93 111 0 158 129 166 2 2 0 3 2 3 22155 18697 1470 17999 43152;43153 49947;49948;49949 49948 3 TADQDFFR Unmodified 998.44576 0.44575938 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 6 0 1 52.164 52.164 2 0.046099 16364 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.224 40.405 78.791 32.805 74.804 65.059 81.2 76.567 74 37 74 65 83 74 1 1 1 1 1 1 5104.7 18698 510 18000 43154 49950 49950 1 TADSEVNTDQDIEK Unmodified 1563.69 0.69002499 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 2 1 1 1 46.365 46.365 3 1.3785E-07 14993 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.703 55.985 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18699 2363 18001 43155;43156 49951;49952 49952 2 TAEAQLAYELQGAR Unmodified 1519.7631 0.76307078 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 4 0 1 61.56 61.56 3 0.01018 21690 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.807 21.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18700 2059 18002 43157 49953 49953 1 TAEDQGVDEK Unmodified 1090.4778 0.47784737 2540 Q8CGK7 Gnal Guanine nucleotide-binding protein G(olf) subunit alpha yes yes 0 0 0 0 2 0 1 36.861 36.861 2 0.031228 10386 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 56.729 24.509 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 940.41 18701 2540 18003 43158 49954 49954 1 TAEEEDEADPKR Unmodified 1388.6056 0.60556708 3027 Q9D0J8 Ptms Parathymosin yes yes 0 0 0 1 4 4.56 2 1 1 1 33.647 33.647 3;4 2.6999E-21 8192 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.62 139.26 976.2 433.57 1114.7 853.28 728.73 744.48 918 454 1086 854 743 711 6 4 4 6 4 5 361440 18702 3027 18004 43159;43160;43161;43162;43163 49955;49956;49957;49958;49959;49960 49960 6 TAEENLDR Unmodified 946.43559 0.43558863 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 13 0 1 31.498 31.498 2 0.0053541 7304 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.71 38.787 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 9622.3 18703 2179 18005 43164 49961 49961 1 TAEGQALSEAR Unmodified 1131.552 0.55201537 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 5.5 4.39 1 1 1 1 36.554 36.554 2 4.0391E-16 10475 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 165.18 96.551 197.7 126.35 208.97 86.985 148.21 234.09 186 130 203 83 149 222 3 2 3 2 3 3 51068 18704 3056 18006 43165;43166;43167;43168 49962;49963;49964;49965 49963 4 TAEGTEPKPQGAIR Unmodified 1453.7525 0.75250609 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 5 0 1 36.676 36.676 3 0.0022626 9506 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.602 45.5 39.516 36.703 0 29.927 36.008 38.414 37 37 0 28 37 37 1 1 0 1 1 1 2992.6 18705 3449;3451 18007 43169 49966 49966 1 TAELEEALER Unmodified 1159.5721 0.57208211 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 3 0.707 1 2 1 59.528 59.528 2;3 3.504E-05 21036 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 121.83 74.632 167.1 162.98 205.69 113.02 149.23 155.1 157 167 204 111 148 148 3 5 4 2 3 3 22035 18706 1669 18008 43170;43171;43172;43173 49967;49968;49969;49970;49971 49969 5 TAELSPFIVFIAPTDQGTQTEALQQLQK Unmodified 3073.5972 0.59718123 632 B7ZCL8;P70290 Mpp1 55 kDa erythrocyte membrane protein yes no 0 0 0 0 10.5 2.5 1 1 95.706 95.706 4 5.3736E-08 34594 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.658 39.714 0 0 15.148 0 44.179 23.257 0 0 14 0 43 23 0 0 1 0 2 2 4024.1 18707 632 18009 43174;43175 49972;49973 49972 2 TAEQALPLGNGK Deamidation (N) 1198.6194 0.61936665 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 1 0 0 5.75 0.433 1 3 55.147 55.147 3 0.001103 17967 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.44 41.111 118.34 121.48 120.15 166.24 136.94 114.42 111 120 121 158 139 111 3 3 3 3 3 3 16869 18708 1497 18010 43176;43177;43178;43179 49974;49975;49976;49977 49977 558 4 TAESGELHGLTTDEK Unmodified 1586.7424 0.74239491 1319 P07309 Ttr Transthyretin yes yes 0 0 0 0 4 0 1 46.264 46.264 3 1.4895E-05 14554 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.431 55.233 69.745 0 0 0 0 29.848 65 0 0 0 0 28 1 0 0 0 0 1 6650.9 18709 1319 18011 43180 49978 49978 1 TAEVLANK Unmodified 844.46543 0.46543219 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 47.67 47.67 2 0.031071 14193 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.692 31.34 68.903 32.822 113.62 93.552 70.467 76.873 65 37 111 93 74 74 1 1 1 1 1 1 4790.9 18710 3204 18012 43181 49979 49979 1 TAFDDAIAELDTLNEDSYK Unmodified 2129.9641 0.96407459 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 6.33 3.65 1 3 2 1 2 93.264 93.264 3;4 3.3643E-63 34171 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 180.81 161.52 312.35 61.082 388.89 258.28 377.43 286.62 293 63 373 257 381 276 8 4 8 5 9 5 193490 18711 1706 18013 43182;43183;43184;43185;43186;43187;43188;43189;43190 49980;49981;49982;49983;49984;49985;49986;49987;49988;49989;49990;49991 49983 12 TAFDDAIAELDTLNEDSYKDSTLIMQLLR Unmodified 3300.6072 0.60715357 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 1 10 3 1 1 113.74 113.74 4 4.9791E-32 44766 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.95 92.708 3.2006 12.768 3.092 3.0947 0 15.99 3 12 3 3 0 15 1 1 1 1 0 2 4263.8 18712 1706 18014 43191;43192 49992;49993 49993 2 TAFDEAIAELDTLNEDSYK Unmodified 2143.9797 0.97972465 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 6.44 3.72 2 2 1 1 1 2 94.568 94.568 3;4 1.08E-58 34326 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 179.14 156 166.37 54.972 168.84 159.56 164.36 71.58 156 53 163 157 161 68 7 5 8 8 5 5 82122 18713 1005 18015 43193;43194;43195;43196;43197;43198;43199;43200;43201 49994;49995;49996;49997;49998;49999;50000;50001;50002;50003;50004 49997 11 TAFDEAIAELDTLNEDSYKDSTLIMQLLR Unmodified 3314.6228 0.62280364 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 13 0 1 114.54 114.54 4 9.3153E-09 44858 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 60.481 42.98 7.511 0 0 15.131 9.0704 9.594 7 0 0 14 9 9 1 0 0 2 1 1 1994.7 18714 1005 18016 43202 50005;50006 50006 2 TAFDEAIAELDTLNEESYK Unmodified 2157.9954 0.99537472 2944 Q9CQV8 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 0 6.14 3.04 1 1 2 1 1 1 94.844 94.844 3;4 8.6105E-48 34338 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 161.24 136.95 140.87 93.05 221.08 88.49 131.41 115.81 132 93 216 86 130 111 10 6 7 6 8 6 76814 18715 2944 18017 43203;43204;43205;43206;43207;43208;43209 50007;50008;50009;50010;50011;50012;50013;50014;50015;50016;50017;50018;50019 50010 13 TAFDEAIAELDTLNEESYKDSTLIMQLLR Unmodified 3328.6385 0.6384537 2944 Q9CQV8 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes yes 0 0 0 1 13 0 1 116.2 116.2 4 2.3601E-12 45033 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.581 55.611 3.1879 6.169 0 3.167 5.9533 5.1601 3 6 0 3 6 5 1 1 0 1 1 1 2323.5 18716 2944 18018 43210 50020 50020 1 TAFDEAIAELDTLSEESYK Unmodified 2130.9845 0.98447568 1773 P63101 Ywhaz 14-3-3 protein zeta/delta yes yes 0 0 0 0 6.78 3.52 1 2 1 2 1 2 99.967 99.967 3;4 1.2145E-59 35974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 179.74 153.92 786.39 600.07 874.3 612.49 868.7 403.17 740 623 868 615 867 390 12 10 12 13 12 10 314400 18717 1773 18019 43211;43212;43213;43214;43215;43216;43217;43218;43219 50021;50022;50023;50024;50025;50026;50027;50028;50029;50030;50031;50032;50033;50034;50035;50036;50037;50038 50028 18 TAFDEAIAELDTLSEESYKDSTLIMQLLR Unmodified 3301.6276 0.62755466 1773 P63101 Ywhaz 14-3-3 protein zeta/delta yes yes 0 0 0 1 13 0 2 122.77 122.77 4 1.8925E-31 45547 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.794 71.39 0 19.152 0 20.655 5.9799 25.584 0 18 0 19 6 24 0 2 0 2 1 1 8539.5 18718 1773 18020 43220;43221 50039;50040 50039 2 TAFNTDQGSACSYEEEK Unmodified 1935.7793 0.77925071 400 A0A2R8W6P0;D3Z187;A0A2R8VI94 Cd47 yes no 0 0 0 0 4 0 1 51.542 51.542 3 8.6588E-05 17047 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.705 53.917 0 19.766 26.942 48.672 0 0 0 19 28 46 0 0 0 1 1 1 0 0 2812.8 18719 400 18021 43222 50041 50041 1 TAGAQVVLTDQELQLWPSDLDKPSASEGLPPGSR Unmodified 3561.7951 0.79510577 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 1 7 2.77 2 2 1 1 80.459 80.459 4;5 5.0099E-22 29661 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.422 68.715 307.03 209.13 394.36 230.84 308.81 510.67 288 205 381 222 307 486 9 6 10 6 8 11 53642 18720 1390 18022 43223;43224;43225;43226;43227;43228 50042;50043;50044;50045;50046;50047;50048;50049;50050;50051;50052;50053;50054;50055;50056 50049 15 TAGLEEK Unmodified 746.38103 0.38103386 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 4 0 1 29.567 29.567 3 0.033717 6715 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.011 18.452 0 48.16 46.882 0 37.054 47.979 0 46 46 0 37 46 0 1 1 0 1 1 1307.8 18721 2422 18023 43229 50057 50057 1 TAGYPNVNIHNFTTSWR Unmodified 1976.9493 0.94930842 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 10.2 1.92 1 1 1 1 63.436 63.436 3 2.3287E-25 19597 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.33 120.75 197.51 129.03 57.717 219.08 82.22 138.58 185 130 56 205 83 130 3 2 1 3 1 2 67442 18722 2148 18024 43230;43231;43232;43233 50058;50059;50060;50061 50059 4 TAGYPNVNVHNFTTSWR Unmodified 1962.9337 0.93365835 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 0 1 60.26 60.26 3 2.8434E-06 18754 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.572 82.266 39.139 45.368 56.02 37.102 0 39.442 37 46 56 37 0 37 1 1 1 1 0 1 10443 18723 2186 18025 43234 50062 50062 1 TAHSFEQVLTDITDAIK Unmodified 1887.9578 0.95780742 102 A0A0G2JGQ6;Q9JLM8;Q80VB6 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 7 0 1 90.062 90.062 4 0.013858 33325 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.083 25.107 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 741.23 18724 102 18026 43235 50063 50063 1 TAHSLFK Unmodified 802.43374 0.43373813 3186 Q9ERK4;E9Q1T9;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 10 0 1 42.259 42.259 3 0.042024 8630 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.787 30.886 127.77 88.81 91.293 75.441 0 99.138 120 93 93 74 0 93 1 1 1 1 0 1 3476.9 18725 3186 18027 43236 50064 50064 1 TAIPFTQEPQR Unmodified 1286.6619 0.66190017 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 7 0 1 53.51 53.51 2 2.812E-08 16131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.81 84.058 39.516 36.703 0 40.441 0 39.442 37 37 0 37 0 37 1 1 0 1 0 1 5211.1 18726 2057 18028 43237 50065 50065 1 TAKNSSVTEFILAGLTNQPGLR Unmodified 2316.2438 0.24375911 2294 Q7TRE5 Olfr875 Olfactory receptor yes yes 0 0 0 1 11 0 1 70.759 70.759 4 0.00045135 20658 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.729 32.247 255.31 225.38 0 290.77 172.83 395.88 239 228 0 269 191 376 1 1 0 1 1 1 859760 18727 2294 18029 43238 50066;50067 50067 2 TAKPTYLGSPVK Unmodified 1260.7078 0.70778773 461 A2AG50;A2AG51 Map7d2 MAP7 domain-containing protein 2 yes no 0 0 0 1 10 0.816 1 1 1 49.621 49.621 3 0.00066419 11523 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.386 44.087 88.027 129.24 187.83 92.906 155.02 143.75 83 130 185 93 157 139 1 2 2 1 2 2 10189 18728 461 18030 43239;43240;43241 50068;50069;50070 50069 3 TALAEAELEYNPEHVSR Unmodified 1927.9276 0.92756992 2413 Q8BIJ6;E9PWN2;E9PWN3 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 0 3.5 0.5 1 1 57.088 57.088 3 3.7203E-06 19879 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 92.307 76.365 89.5 83.658 76.729 18.08 19.043 98.072 84 83 74 19 19 92 2 2 2 1 1 2 10701 18729 2413 18031 43242;43243 50071;50072;50073 50071 3 TALALAIAQELGSK Unmodified 1384.7926 0.79257999 1665 P60122;D3YW60 Ruvbl1 RuvB-like 1 yes no 0 0 0 0 11 0.816 1 1 1 87.951 87.951 3 8.3782E-05 24869 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.417 50.86 20.26 83.754 30.296 15.74 130.47 47.979 19 80 28 15 127 46 1 2 1 1 3 1 22065 18730 1665 18032 43244;43245;43246 50074;50075;50076;50077 50077 4 TALALEVGDIVK Unmodified 1227.7075 0.70745338 1571 P47941 Crkl Crk-like protein yes yes 0 0 0 0 6 0 1 76.345 76.345 3 0.00059031 27756 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.55 29.326 0 20.08 8.1166 9.3533 0 0 0 19 9 9 0 0 0 1 1 1 0 0 2097.9 18731 1571 18033 43247 50078 50078 1 TALALEVGELVK Unmodified 1241.7231 0.72310344 2166 Q64010 Crk Adapter molecule crk yes yes 0 0 0 0 7 0 2 80.214 80.214 2;3 7.0349E-05 28730 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.477 56.515 59.644 47.581 34.267 58.632 28.382 39.442 56 47 37 56 28 37 2 1 2 2 1 1 4259.3 18732 2166 18034 43248;43249 50079;50080 50079 2 TALHVAAAEGHVEVVK Unmodified 1629.8839 0.88385462 789 D3Z7P3;D3Z7P4;F7B327 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 49.241 49.241 4 1.0631E-05 15034 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.833 52.276 196.11 229.07 208.79 155.77 238.02 201.08 185 231 213 158 241 195 2 2 2 2 2 2 17375 18733 789 18035 43250;43251 50081;50082 50081 2 TALIHDGLAR Unmodified 1065.5931 0.59309232 1013 Q6ZWZ6;F7AEH4;A0A1W2P7A1;P63323 Rps12 40S ribosomal protein S12 yes no 0 0 0 0 8.67 3.09 1 1 1 43.696 43.696 3 5.507E-06 12600 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.325 51.345 118.53 0 164.63 128.56 139.49 0 111 0 158 129 139 0 1 0 2 2 2 0 27382 18734 1013 18036 43252;43253;43254 50083;50084;50085 50083 3 TALLDAAGVASLLTTAEAVVTEIPK Unmodified 2453.3629 0.36287119 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 10 1.87 1 1 1 1 120.26 120.26 4 6.3197E-23 37780 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.884 74.942 39.322 10.892 9.8847 22.461 20.48 5.33 38 11 10 21 20 5 3 2 2 3 2 1 8115.5 18735 1766 18037 43255;43256;43257;43258 50086;50087;50088;50089;50090 50086 5 TALLDAAGVASLLTTAEAVVTEIPKEEK Unmodified 2839.543 0.5430204 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 9 2.1 1 2 1 1 110.15 110.15 4;5 2.0493E-52 36978 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 149.44 137.24 27.67 21.918 35.66 43.074 47.001 37.703 26 22 35 42 47 36 3 3 3 5 4 4 10240 18736 1766 18038 43259;43260;43261;43262;43263 50091;50092;50093;50094;50095;50096 50092 6 TALLELWELR Unmodified 1242.6972 0.69722304 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 10.6 2.06 1 1 1 2 87.857 87.857 2;3 1.5811E-05 28318 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 129.38 89.031 217.32 195.88 112.67 220.03 169.58 105.03 203 194 111 204 166 102 2 3 2 2 3 2 156940 18737 551 18039 43264;43265;43266;43267;43268 50097;50098;50099;50100;50101;50102 50100 6 TALLELWELRR Unmodified 1398.7983 0.79833407 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 11 1.41 1 1 1 1 1 74.301 74.301 3 2.3283E-21 22492 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 179.19 137.11 231.31 254.94 309.75 75.256 156.06 405.96 218 256 301 74 157 385 4 4 3 1 2 5 105220 18738 551 18040 43269;43270;43271;43272;43273 50103;50104;50105;50106;50107 50104 5 TALLGLTK Unmodified 815.51165 0.5116541 2857 Q99LB2;A0A2I3BRG8 Dhrs4 Dehydrogenase/reductase SDR family member 4 yes no 0 0 0 0 11 0 1 63.9 63.9 2 0.0050889 17296 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.89 71.648 0 0 0 139 0 0 0 0 0 139 0 0 0 0 0 1 0 0 22948 18739 2857 18041 43274 50108 50108 1 TALLSAAK Unmodified 773.4647 0.46470391 2258 Q6WQJ1 Dagla Sn1-specific diacylglycerol lipase alpha yes yes 0 0 0 0 10 0 1 53.385 53.385 2 0.01144 13057 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.429 28.861 0 0 85.478 0 53.346 0 0 0 79 0 51 0 0 0 1 0 1 0 4704.4 18740 2258 18042 43275 50109 50109 1 TALPTSGSSTGELELLAGEVPAR Unmodified 2255.1645 0.16450573 2324 Q80VP1 Epn1 Epsin-1 yes yes 0 0 0 0 6.4 3.38 2 1 1 1 76.471 76.471 3;4 4.9777E-23 27836 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.08 100.75 9.5583 88.731 0 162.5 38.134 158.29 9 84 0 149 38 149 1 3 0 3 2 3 41191 18741 2324 18043 43276;43277;43278;43279;43280 50110;50111;50112;50113;50114 50113 5 TALSDLYLEHLLQK Unmodified 1642.893 0.89302232 632 B7ZCL8;P70290;A2AN84;B7ZCL9;B7ZCM0;D6RFD5;B7ZCM1 Mpp1 55 kDa erythrocyte membrane protein yes no 0 0 0 0 8 0 1 78.665 78.665 3 0.052877 27370 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.008 11.757 48.687 44.404 75.173 44.557 65.943 0 46 46 74 46 65 0 1 1 1 1 1 0 3305.2 18742 632 18044 43281 50115 50115 1 TALTEER Unmodified 818.4134 0.41339662 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 4.5 0.5 1 1 33.693 33.693 2 0.0023871 8547 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.31 63.964 0 130.11 172.89 0 0 142.84 0 125 167 0 0 134 0 1 1 0 0 1 19101 18743 607 18045 43282;43283 50116;50117 50116 2 TALTYYLDITNPPR Unmodified 1636.8461 0.84607213 1530 Q05DV1;P37040 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 9 0 1 78.074 78.074 3 0.0061583 26345 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.797 34.236 39.516 36.703 0 0 27.265 58.918 37 37 0 0 28 56 1 1 0 0 1 1 5106.3 18744 1530 18046 43284 50118 50118 1 TALVANTSNMPVAAR Unmodified 1514.7875 0.78751139 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 9.33 2.62 1 1 1 53.612 53.612 2 3.9674E-36 15577 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 183.06 155.95 68.98 25.195 107.22 28.881 94.295 116.7 65 28 102 28 93 112 2 1 2 1 2 3 29160 18745 1596 18047 43285;43286;43287 50119;50120;50121 50120 3 TALVSADGEEVAVK Unmodified 1387.7195 0.71947463 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 5 0 1 58.895 58.895 2 0.00055637 20246 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.216 48.037 30.006 7.5527 0 0 0 29.848 28 9 0 0 0 28 1 1 0 0 0 1 1992.8 18746 182 18048 43288 50122 50122 1 TALVSPGK Unmodified 771.44905 0.44905385 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 8.5 0.5 1 1 46.514 46.514 2;3 0.0075608 11482 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.14 36.221 173.34 96.84 0 162.86 0 123.66 162 102 0 149 0 116 2 2 0 2 0 1 21524 18747 1999 18049 43289;43290 50123;50124 50124 2 TAMDNSEIAGEK Unmodified 1264.5605 0.56053115 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4 0 1 47.557 47.557 3 0.0031001 15073 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.576 35.634 0 39.368 0 69.876 62.132 77.111 0 37 0 65 65 74 0 1 0 1 1 1 3746.1 18748 2517 18050 43291 50125 50125 1 TAMNVNDLFLAIAK Unmodified 1519.8068 0.80684985 1683 P61021 Rab5b Ras-related protein Rab-5B yes yes 0 0 0 0 10 0 1 90.073 90.073 3 6.6646E-05 29175 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.499 52.502 0 57.402 66.886 0 0 0 0 55 65 0 0 0 0 1 1 0 0 0 5066.2 18749 1683 18051 43292 50126 50126 1 TAMNVNEIFMAIAK Unmodified 1551.7789 0.77892054 1514 P35278;Q8C266 Rab5c Ras-related protein Rab-5C yes no 0 0 0 0 10.7 1.7 1 1 1 89.434 89.434 3 6.3071E-17 28963 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.9 99.925 60.088 0 0 50.278 0 0 56 0 0 46 0 0 1 0 0 1 0 0 3242.4 18750 1514 18052 43293;43294;43295 50127;50128;50129 50128 3 TANLGAGAAQPLR Unmodified 1238.6731 0.67313356 1325 P08226;A0A1B0GX15;G3UWN5 Apoe Apolipoprotein E yes no 0 0 0 0 6.5 0.5 1 1 45.949 45.949 2 7.8468E-05 13481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.43 77.328 54.053 78.577 46.098 41.488 88.833 38.129 51 78 46 42 88 37 2 2 1 2 2 1 15738 18751 1325 18053 43296;43297 50130;50131 50130 2 TANQEQAIVHK Unmodified 1237.6415 0.64149908 1949 Q3TYX3 Smyd5 SET and MYND domain-containing protein 5 yes yes 0 0 0 0 5 0 1 38.502 38.502 3 0.00063142 10448 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.958 48.166 48.689 55.205 65.583 26.695 0 59.696 46 56 65 28 0 56 1 1 1 1 0 1 3610.3 18752 1949 18054 43298 50132 50132 1 TANQGNGTGEAR Deamidation (N) 1175.5167 0.5166925 1961 Q3U487 Hectd3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 1 0 0 1 0 2 21.881 21.881 2 3.1433E-08 3298 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.71 56.405 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 1730.5 18753 1961 18055 43299;43300 50133;50134 50134 786;787 2 TANTISK Unmodified 733.39702 0.39701828 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 0 7.5 0.5 1 1 36.932 36.932 2 0.026906 7786 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.819 48.551 172.88 202.6 167.48 101.28 269.37 61.795 163 204 171 97 264 60 2 2 2 1 2 1 17418 18754 1796 18056 43301;43302 50135;50136 50136 2 TAPDDLQDLHTLHLQDR Unmodified 1986.9759 0.9759171 1163 O08688 Capn5 Calpain-5 yes yes 0 0 0 0 4 0 1 54.568 54.568 4 3.7812E-06 18486 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.184 59.801 29.933 0 18.655 39.329 0 0 28 0 19 37 0 0 1 0 1 1 0 0 2780.1 18755 1163 18057 43303 50137 50137 1 TAPFDSR Unmodified 792.37662 0.37661719 1639 P56391 Cox6b1 Cytochrome c oxidase subunit 6B1 yes yes 0 0 0 0 8 3.56 1 1 1 38.372 38.372 2 0.0057931 10413 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 138.24 23.656 1679.2 1339.3 1580.4 1323.7 2592.7 2228.6 1580 1375 1551 1299 2610 2160 4 3 3 3 4 4 257970 18756 1639 18058 43304;43305;43306 50138;50139;50140;50141 50138 4 TAPLLLSYYLIK Unmodified 1393.8221 0.82208921 3366 Q9Z0W3 Nup160 Nuclear pore complex protein Nup160 yes yes 0 0 0 0 1 0 1 92.084 92.084 3 4.1555E-07 32622 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.403 61.199 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18757 3366 18059 43307 50142 50142 1 TAPTVIT Unmodified 701.39596 0.39595564 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 5 0 1 51.41 51.41 2 0.03503 16589 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.263 72.513 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 13400 18758 3022 18060 43308 50143 50143 1 TAPYVVTGSVDQTVK Unmodified 1563.8144 0.81443765 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 6.5 0.5 1 1 58.921 58.921 3 2.2589E-22 18727 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.14 111.39 69.745 78.047 41.223 86.792 78.148 215.23 65 74 46 83 83 204 1 1 1 1 1 2 28946 18759 1760 18061 43309;43310 50144;50145 50145 2 TAQEVDTYR Unmodified 1081.504 0.50400254 2135 Q8BTS0;Q61656;S4R1I6;B1ARB9;B1ARC0 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 3.5 0.5 1 1 36.694 36.694 2 0.0099114 9979 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.509 49.404 88.456 52.671 56.724 96.313 45.846 29.848 83 56 56 92 46 28 2 2 1 2 1 1 9821.1 18760 2135 18062 43311;43312 50146;50147 50147 2 TAQNLSIFLGSFR Unmodified 1452.7725 0.77251325 737 F6XC54;D3Z074;E9PXV7;E9PV41;O08808 Diap1;Diaph1 Protein diaphanous homolog 1 yes no 0 0 0 0 11.5 0.5 1 1 81.639 81.639 2 0.00065107 25371 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.133 47.46 0 0 29.01 28.875 0 49.036 0 0 28 28 0 46 0 0 1 1 0 1 3340.1 18761 737 18063 43313;43314 50148;50149 50148 2 TAQQQLEQR Unmodified 1100.5574 0.5574351 2045 Q5EBJ4 Ermn Ermin yes yes 0 0 0 0 6.25 3.96 1 1 1 1 30.904 30.904 2 1.1969E-05 6969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.22 80.365 63.752 104.2 120.84 48.988 120.49 24.518 60 103 116 47 116 23 2 3 3 2 3 1 19586 18762 2045 18064 43315;43316;43317;43318 50150;50151;50152;50153 50153 4 TAQSEETR Unmodified 920.41994 0.41993856 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 3.33 4.35 3 2 1 20.098 20.098 2 0.0010457 2896 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.27 84.168 15.877 112.29 29.034 39.146 77.148 50.719 15 107 30 37 76 49 1 6 2 3 4 4 21035 18763 1355 18065 43319;43320;43321;43322;43323;43324 50154;50155;50156;50157;50158;50159;50160 50159 7 TASAEEIK Unmodified 847.42871 0.42871234 1466 P27612 Plaa Phospholipase A-2-activating protein yes yes 0 0 0 0 5 0 1 40.767 40.767 2 0.049916 11542 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.673 32.937 29.865 0 30.145 0 0 39.442 28 0 28 0 0 37 1 0 1 0 0 1 1678.2 18764 1466 18066 43325 50161 50161 1 TASAVAGK Unmodified 703.38645 0.38645359 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 7 0 1 36.086 36.086 2 0.02017 8076 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.213 32.439 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18765 1943 18067 43326 50162 50162 1 TASDFISK Unmodified 867.4338 0.43379771 1365 P13020;A0A0J9YUQ8;CON__Q3SX14 Gsn Gelsolin yes no 0 0 0 0 7 0 1 53.826 53.826 2 0.018839 16316 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.934 35.688 87.884 91.015 120.32 81.128 128.65 105.06 83 93 120 83 130 102 1 1 1 1 1 1 6167.5 + 18766 1365 18068 43327 50163 50163 1 TASDLMVLLLLGDESMQK Unmodified 1963.0006 0.0006002115 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 11 2 1 1 105.6 105.6 3 6.3746E-10 36945 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.8 94.261 9.657 20.216 0 15.13 9.1709 0 9 19 0 14 9 0 1 1 0 2 1 0 4355.7 18767 919;937 18069 43328;43329 50164;50165 50164 2 TASDQATTAR Unmodified 1020.4836 0.48360145 688 D3Z730;Q3UUT0;G3X9H1;D3Z729;Q0P688;D3YUV9;Q8BMB3 Eif4e2 Eukaryotic translation initiation factor 4E type 2 yes no 0 0 0 0 2 0 1 22.626 22.626 2 0.0031824 4027 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 74.269 44.893 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18768 688 18070 43330 50166 50166 1 TASEMVLADDNFSTIVAAVEEGR Unmodified 2424.1479 0.14786939 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 13 0 1 94.519 94.519 3 6.2962E-13 37807 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.976 63.384 0 0 30.296 0 0 20.254 0 0 28 0 0 19 0 0 1 0 0 1 3132.6 18769 1242 18071 43331 50167 50167 1 TASFSESR Unmodified 883.40356 0.40356022 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 5.5 0.5 1 1 33.864 33.864 2 0.015602 7787 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.313 43.215 39.701 47.349 95.405 53.421 207.03 113.48 37 46 93 56 204 112 1 1 1 1 2 2 11356 18770 2020 18072 43332;43333 50168;50169 50169 2 TASGSSVTSLEGTR Unmodified 1351.6579 0.657937 2159 Q62433 Ndrg1 Protein NDRG1 yes yes 0 0 0 0 4.5 0.5 1 1 41.656 41.656 2;3 1.4382E-31 12312 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.58 120.05 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 4123.4 18771 2159 18073 43334;43335 50170;50171 50170 2 TASGVTQLADIYEK Unmodified 1494.7566 0.75658842 882 O08532;E9Q1X8;Q8C6Y3 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 6 0 2 67.479 67.479 2;3 0.00012659 23564 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.78 66.582 98.964 80.461 70.467 104.95 79.449 86.211 93 83 74 102 83 83 1 1 1 2 1 1 10182 18772 882 18074 43336;43337 50172;50173 50172 2 TASLNQRPR Unmodified 1041.5679 0.56794021 634 B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi1 Abl interactor 1 yes no 0 0 0 1 8 0 1 26.702 26.702 3 0.00083036 4036 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.19 73.526 0 0 0 34.483 26.192 44.025 0 0 0 32 28 42 0 0 0 1 1 1 5382.9 18773 634 18075 43338 50174 50174 1 TASLTSAASIDGSR Unmodified 1335.663 0.66302238 3277 Q9QYG0 Ndrg2 Protein NDRG2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 49.06 49.06 2 5.6916E-31 14015 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 165.63 108.03 89.014 8.9279 0 59.86 71.686 86.432 83 9 0 56 74 83 3 1 0 2 2 2 11309 18774 3277 18076 43339;43340;43341;43342 50175;50176;50177;50178 50177 4 TASNVEEAFINTAK Unmodified 1493.7362 0.73618733 1617 P53994 Rab2a Ras-related protein Rab-2A yes yes 0 0 0 0 7.75 3.11 1 1 1 1 65.77 65.77 2;3 7.3727E-21 23758 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.68 99.732 355.78 252.14 222.92 273.7 315.45 474.96 334 259 223 268 324 454 4 3 3 4 3 4 58448 18775 1617 18077 43343;43344;43345;43346 50179;50180;50181;50182 50182 4 TASSVLLHTGQK Acetyl (Protein N-term) 1282.6881 0.68811492 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 1 0 0 0 5.5 0.5 1 1 53.026 53.026 2;3 8.6772E-18 17445 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.593 35.699 108.25 122.04 96.976 123.91 136.43 95.245 102 120 102 121 139 93 2 1 2 2 2 2 10470 18776 3214 18078 43347;43348 50183;50184 50183 2 TASTNSIAQAR Deamidation (N) 1119.552 0.55201537 137 A0A0N4SVT3;A0A0N4SW28;Q9DAS9 Gng12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes no 0 1 0 0 6.5 3.77 2 1 1 35.212 35.212 2 8.6536E-07 8917 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.94 78.283 206.39 124.52 271.98 70.022 222.79 270.8 194 130 259 65 223 260 2 1 2 1 2 3 25493 18777 137 18079 43349;43350;43351;43352 50185;50186;50187;50188 50187 61 4 TASTNSIAQAR Unmodified 1118.568 0.56799978 137 A0A0N4SVT3;A0A0N4SW28;Q9DAS9 Gng12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 yes no 0 0 0 0 8 3.56 1 1 1 32.992 32.992 2 1.3785E-07 7801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 110.74 78.787 66.519 75.064 100.57 115.39 55.059 97.567 65 74 102 112 56 93 2 2 2 2 1 2 12516 18778 137 18079 43353;43354;43355 50189;50190;50191 50189 3 TASVLWPWINR Unmodified 1341.7194 0.71935547 592 B1AUW8;B1AUW9;Q8BR10;B1AUW6;Q62406 Irak1 Interleukin-1 receptor-associated kinase 1 yes no 0 0 0 0 12 0 1 81.455 81.455 2 0.0020246 22356 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.749 39.503 0 29.478 18.789 0 29.288 0 0 28 19 0 28 0 0 1 1 0 1 0 1339.3 18779 592 18080 43356 50192 50192 1 TATAGPGTTK Unmodified 903.46616 0.46616048 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7 0.816 1 1 1 33.603 33.603 2 1.1605E-05 6357 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.1 76.9 69.745 0 86.432 75.731 0 49.036 65 0 83 74 0 46 1 0 1 1 0 1 18096 18780 1382 18081 43357;43358;43359 50193;50194;50195 50195 3 TATALFESPLSATVQDALQSFLK Unmodified 2437.2741 0.27405618 1991 Q3UJU9 Rmdn3 Regulator of microtubule dynamics protein 3 yes yes 0 0 0 0 10.5 0.5 1 1 113.26 113.26 4 1.7652E-10 34459 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.398 53.633 7.3865 14.25 8.8458 9 14.644 0 7 14 9 9 14 0 1 1 1 1 1 0 2509.8 18781 1991 18082 43360;43361 50196;50197 50196 2 TATAVAHCK Unmodified 957.4702 0.4702 1372 P14131 Rps16 40S ribosomal protein S16 yes yes 0 0 0 0 7 0 1 30.58 30.58 3 0.0015041 5601 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.334 60.47 0 38.951 24.92 68.212 71.632 76.84 0 37 28 65 74 74 0 1 1 1 1 1 3586.8 18782 1372 18083 43362 50198 50198 1 TATDEAYKDPSNLQGK Unmodified 1736.8217 0.82170787 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.38 3.35 1 2 2 1 2 48.301 48.301 3;4 4.5203E-17 15202 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 131.48 109.26 820.53 759.92 737.13 916.09 367.8 1346.5 770 772 738 881 387 1273 6 5 4 7 4 8 147390 18783 551 18084 43363;43364;43365;43366;43367;43368;43369;43370 50199;50200;50201;50202;50203;50204;50205;50206 50206 8 TATEEWGTEDWNEDLSETK Unmodified 2239.9393 0.9393164 83 A0A0H2UH17;A0A0G2JDV6;Q80X50 Ubap2l Ubiquitin-associated protein 2-like yes no 0 0 0 0 3 0 1 70.754 70.754 3 3.5843E-20 26165 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 132.64 123.36 0 0 9.738 0 29.288 0 0 0 9 0 28 0 0 0 1 0 1 0 3388.5 18784 83 18085 43371 50207 50207 1 TATHEVHR Unmodified 949.47298 0.47297719 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 4 1 1 1 15.972 15.972 3 0.00058172 2383 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.58 70.82 2.146 0 7.574 3.279 0 8.528 2 0 7 3 0 8 1 0 1 1 0 2 1149.1 18785 570 18086 43372;43373 50208;50209 50208 2 TATPQQAQEVHEK Unmodified 1465.7161 0.71612058 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 6.27 3.39 2 2 2 2 1 2 33.989 33.989 3;4 7.8335E-88 8235 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 226.51 189.27 1257.6 507.6 1168.6 1168.8 904.56 1289.6 1180 505 1126 1148 918 1231 12 8 7 12 9 11 488680 18786 1405 18088 43374;43375;43376;43377;43378;43379;43380;43381;43382;43383;43384 50210;50211;50212;50213;50214;50215;50216;50217;50218;50219;50220;50221;50222;50223;50224;50225 50216 16 TATQLAVNK Unmodified 944.5291 0.52909508 1822 P80313 Cct7 T-complex protein 1 subunit eta yes yes 0 0 0 0 7.5 0.5 1 1 46.324 46.324 2 1.4918E-08 12865 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 168.26 90.336 29.679 76.095 38.255 59.844 72.529 61.89 28 74 37 56 74 60 1 2 1 1 1 1 15793 18787 1822 18089 43385;43386 50226;50227 50226 2 TATSASASPTLR Unmodified 1161.599 0.59896556 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 0 9 4 1 1 35.802 35.802 2 0.00057718 9134 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.775 43.388 0 39.368 0 29.528 57.22 0 0 37 0 28 56 0 0 1 0 1 1 0 3836.2 18788 2306 18090 43387;43388 50228;50229 50228 2 TATSLDLEWDNSEAEAQEYK Unmodified 2299.0128 0.012815695 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 6.83 4.41 2 1 1 2 71.87 71.87 3;4 5.337E-18 26169 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 124.63 107.95 123.65 74.108 155.42 136.61 52.502 176 116 75 153 130 56 166 5 3 5 5 2 3 44526 18789 2479 18091 43389;43390;43391;43392;43393;43394 50230;50231;50232;50233;50234;50235;50236;50237 50233 8 TATSLDLEWDNSEAEAQEYK Deamidation (N) 2299.9968 0.99683128 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 1 0 0 4 0 1 71.936 71.936 4 0.0035057 26340 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.711 27.29 29.789 17.742 27.823 28.242 37.405 0 28 19 28 28 37 0 1 1 1 1 1 0 6759.9 18790 2479 18091 43395 50238 50238 935 1 TAVAPIER Unmodified 855.48142 0.48141661 1585;1607 P48962;Q3V132;P51881 Slc25a4;Slc25a31;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 7.67 3.86 1 1 1 39.307 39.307 2 0.0029834 10374 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.5 50.254 698.68 441.78 755.91 634.1 443.44 791.11 657 451 743 629 468 754 2 2 2 3 2 3 325300 18791 1585;1607 18092 43396;43397;43398 50239;50240;50241 50240 3 TAVCDIPPR Unmodified 1027.5121 0.51206481 1795;2283;1863;2975;3072 P99024;P68372;Q7TMM9;Q9CWF2;Q9D6F9 Tubb5;Tubb4b;Tubb2a;Tubb2b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-2A chain;Tubulin beta-2B chain;Tubulin beta-4A chain no no 0 0 0 0 8.85 3.82 2 4 3 2 9 43.66 43.66 2;3 2.5259E-09 11851 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 170.3 125.85 7058.9 6132.1 8641.9 7179.8 8832.9 7706.1 6636 6204 8536 7106 8865 7408 46 50 52 52 46 51 273610 18792 1863;1795;2283;2975;3072 18093 43399;43400;43401;43402;43403;43404;43405;43406;43407;43408;43409;43410;43411;43412;43413;43414;43415;43416;43417;43418 50242;50243;50244;50245;50246;50247;50248;50249;50250;50251;50252;50253;50254;50255;50256;50257;50258;50259;50260;50261;50262;50263;50264;50265;50266;50267;50268;50269;50270;50271;50272;50273;50274;50275;50276;50277;50278;50279;50280;50281;50282;50283;50284;50285;50286;50287;50288;50289;50290;50291;50292;50293;50294;50295;50296;50297;50298;50299;50300;50301;50302;50303;50304;50305;50306;50307;50308;50309;50310;50311;50312;50313;50314;50315;50316 50278 75 TAVETAVLLLR Unmodified 1184.7129 0.71287311 1827 P80318;E9Q133 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 8.5 0.5 1 1 76.753 76.753 2 0.0016214 26473 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.377 47.085 118.78 132.04 56.499 88.612 189.44 39.442 111 130 56 83 185 37 2 2 1 1 2 1 37797 18793 1827 18094 43419;43420 50317;50318;50319 50317 3 TAVLDAIDALMK Unmodified 1259.6795 0.67952407 1552 P46061 Rangap1 Ran GTPase-activating protein 1 yes yes 0 0 0 0 9 0 1 94.184 94.184 3 0.047389 33631 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.847 18.067 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 459.71 18794 1552 18095 43421 50320 50320 1 TAVLETMTAFR Unmodified 1238.6329 0.63290823 1343 P10518 Alad Delta-aminolevulinic acid dehydratase yes yes 0 0 0 0 9 0 1 70.286 70.286 2 0.0097216 22825 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.547 37.476 0 38.231 68.036 0 114.53 45.768 0 37 65 0 111 46 0 1 1 0 1 1 5103.7 18795 1343 18096 43422 50321 50321 1 TAVPQGQETLSR Unmodified 1285.6626 0.66262845 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4.5 0.5 1 1 39.925 39.925 2 0.0083874 11087 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.132 18.984 0 0 29.472 18.494 27.44 29.065 0 0 28 19 28 28 0 0 1 1 1 1 3149.1 18796 3449;3451 18097 43423;43424 50322;50323 50323 2 TAVTTPK Unmodified 716.40685 0.40685468 816 E9PUE7;Q5SSL4;H3BJY3 Abr Active breakpoint cluster region-related protein yes no 0 0 0 0 7.5 0.5 1 1 37.653 37.653 2 0.025583 8095 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.45 61.633 68.828 120.23 168.08 113.38 180.47 75.741 65 120 167 116 180 74 1 2 2 2 2 1 8951.7 18797 816 18098 43425;43426 50324;50325 50325 2 TAVVIDLGEAFTK Unmodified 1362.7395 0.73948179 3286 Q9QZB7 Actr10 Actin-related protein 10 yes yes 0 0 0 0 8 0 1 82.555 82.555 3 0.00039413 29211 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.034 37.596 20.129 18.394 27.824 28.438 26.983 29.078 19 19 28 28 28 28 1 1 1 1 1 1 1818.4 18798 3286 18099 43427 50326 50326 1 TAVVVPQSQAQPATAPQAAAAQEPGQIQAPVR Unmodified 3179.6687 0.66872347 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 5.5 0.5 1 1 59.68 59.68 4 7.7209E-05 19938 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.551 32.342 9.5583 19.571 0 29.411 18.936 0 9 19 0 28 19 0 1 1 0 2 1 0 5857.9 18799 1983 18100 43428;43429 50327;50328 50328 2 TAWTFSR Unmodified 867.4239 0.42390173 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 10.7 1.7 1 1 1 53.036 53.036 2 0.0057931 14642 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 138.24 84.037 673.23 690.06 1004.6 586.22 884.61 1018.4 633 707 994 599 901 979 2 3 3 2 2 3 110060 18800 2897 18101 43430;43431;43432 50329;50330;50331 50329 3 TAYGPNGMNK Deamidation (N) 1052.4597 0.45969489 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 1 0 0 6 0 1 45.941 45.941 3 0.049745 13444 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.981 22.092 0 0 68.272 46.209 0 49.036 0 0 65 46 0 46 0 0 1 1 0 1 1907.9 18801 1543 18102 43433 50332 50332 574 1 TAYSYFYEAFEGYDSIDSPK Unmodified 2352.011 0.011024781 2369 Q8BG32;G3UYH2 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 7 0 1 90.035 90.035 3 0.018037 33319 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.358 17.197 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18802 2369 18103 43434 50333 50333 1 TCAYTNHTVLPEALER Unmodified 1873.8992 0.89924668 2555;3331 Q8CI94;Q9WUB3;E9PUM3 Pygb;Pygm Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase no no 0 0 0 0 8 3.56 1 1 1 52.384 52.384 3 6.3883E-33 17257 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 145.18 127.96 127.5 117.21 150.67 64.452 142.51 107.14 120 120 149 65 139 102 2 2 3 2 2 2 33660 18803 2555;3331 18104 43435;43436;43437 50334;50335;50336 50334 3 TCDGVQCAFEELVEK Unmodified 1783.7757 0.77568565 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 13 0 1 80.451 80.451 3 0.00051638 31067 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.646 43.322 0 39.368 0 0 77.404 0 0 37 0 0 74 0 0 1 0 0 1 0 4036.5 18804 1518 18105 43438 50337 50337 1 TCEDWVDGISQFK Unmodified 1583.6926 0.69260795 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 0 9 4 1 1 76.378 76.378 3 0.00058156 29070 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.004 45.42 188.98 34.604 129.27 163.49 79.489 86.21 177 37 129 158 83 83 2 1 2 2 1 1 13265 18805 2636 18106 43439;43440 50338;50339 50339 2 TCEWIHDSSLSASCK Unmodified 1779.7556 0.75561891 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 6 0.707 1 2 1 53.762 53.762 3;4 7.0365E-06 17116 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.652 62.163 246.61 247.42 180.51 161.53 188.08 117 232 251 185 157 185 111 4 4 3 2 3 2 21932 18806 859 18107 43441;43442;43443;43444 50340;50341;50342;50343 50341 4 TCFETFPDK Unmodified 1143.4907 0.49066067 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 5.5 0.5 1 1 59.669 59.669 3 0.00061667 19882 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.867 53.51 127.31 137.18 127.41 74.022 148.11 96.016 120 139 129 74 148 93 2 2 2 1 2 1 16270 18807 2555 18108 43445;43446 50344;50345 50345 2 TCGDVLDNLR Unmodified 1161.5448 0.5448215 1845 P97355;E9PZ58 Sms Spermine synthase yes no 0 0 0 0 5 0 1 55.987 55.987 2 0.011779 18839 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.073 33.987 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18808 1845 18109 43447 50346 50346 1 TCGFDFSGALEDISK Unmodified 1645.7294 0.72938739 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 7.8 2.71 1 3 3 1 2 81.696 81.696 2;3;4 1.1007E-21 30225 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 135.5 101.62 325.93 220.1 335.88 274.38 158.23 293.73 306 223 326 268 157 279 8 6 7 6 4 7 269300 18809 1312 18110 43448;43449;43450;43451;43452;43453;43454;43455;43456;43457 50347;50348;50349;50350;50351;50352;50353;50354;50355;50356 50350 10 TCGSYCGGR Unmodified 1016.3804 0.38039871 648 CON__O43790;P97861 Krt86 Keratin, type II cuticular Hb6 yes no 0 0 0 0 5.5 0.5 1 1 26.6 26.6 2 0.013877 4946 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.525 60.057 0 0 0 0 0 32 0 0 0 0 0 32 0 0 0 0 0 1 1945.4 + 18810 648 18111 43458;43459 50357;50358 50357 2 TCIHTNGR Deamidation (N) 958.42906 0.42906346 1344 P10605 Ctsb Cathepsin B;Cathepsin B light chain;Cathepsin B heavy chain yes yes 0 1 0 0 5 0 2 24.531 24.531 3 0.0081979 4247 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.251 47.927 93.914 0 85.717 105.44 49.667 103.05 88 0 84 102 51 98 2 0 2 2 1 2 8949.9 18811 1344 18112 43460;43461 50359;50360 50360 418 2 TCILDVNPQALK Deamidation (N) 1371.7068 0.70680145 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 1 0 0 7 0 1 70.088 70.088 3 0.0071269 24013 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.7 30.318 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18812 3241 18113 43462 50361 50361 1112 1 TCILDVNPQALK Unmodified 1370.7228 0.72278587 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 8 0 1 69.958 69.958 3 0.002736 23369 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.967 21.02 0 69.16 0 0 102.73 115.39 0 65 0 0 102 111 0 1 0 0 1 1 5778.8 18813 3241 18113 43463 50362 50362 1 TCISLAVSR Unmodified 1005.5277 0.52771487 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 8 0 1 50.963 50.963 2 0.0012919 14333 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.8 57.357 118.47 0 106.89 64.675 0 127.92 111 0 102 65 0 120 1 0 1 1 0 1 16895 18814 1400 18114 43464 50363 50363 1 TCLLICYTTNAFPK Unmodified 1700.8266 0.82659901 1837 P84096;A0A1B0GSL4 Rhog Rho-related GTP-binding protein RhoG yes no 0 0 0 0 11 0 1 78.281 78.281 3 0.032478 23724 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 37.146 18.55 49.063 0 49.525 0 0 59.696 46 0 46 0 0 56 1 0 1 0 0 1 8148.6 18815 1837 18115 43465 50364 50364 1 TCLLISYTTNK Unmodified 1312.6697 0.66968766 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 11.6 1.02 1 1 2 1 66.025 66.025 2;3 1.754E-08 18653 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.94 94.415 227.01 141.92 39.726 256.44 244.13 146.54 212 139 37 240 241 139 3 2 1 4 4 2 44901 18816 1676 18116 43466;43467;43468;43469;43470 50365;50366;50367;50368;50369 50365 5 TCLLISYTTNK Deamidation (N) 1313.6537 0.65370325 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 1 0 0 10 0 1 66.16 66.16 3 0.016065 18697 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.143 30.768 216.67 178.53 221.53 227.04 302.33 213.1 204 185 225 225 306 208 1 1 1 1 1 1 12623 18817 1676 18116 43471 50370 50370 646 1 TCLLIVFSK Unmodified 1079.6049 0.60490256 1733;3254 P62746;Q9QUI0;A0A0A6YXF6;Q62159;H3BL56;A0A0G2JEP8;Q9CR99;A0A0A6YWJ1 Rhob;Rhoa;Rhoc;4930544G11Rik Rho-related GTP-binding protein RhoB;Transforming protein RhoA;Rho-related GTP-binding protein RhoC no no 0 0 0 0 9.5 4.92 1 2 1 80.359 80.359 2;3 0.0009035 30906 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.65 62.856 29.93 0 59.128 77.993 149.01 233.47 28 0 56 74 149 223 1 0 2 2 2 4 34276 18818 1733;3254 18117 43472;43473;43474;43475 50371;50372;50373;50374 50374 4 TCLLNETGDEPFQYK Unmodified 1813.8193 0.81926503 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 7 2.77 2 2 1 1 69.18 69.18 3;4 6.5484E-23 25039 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 141 114.53 206.87 371.41 378.07 239.82 432.77 441.77 195 361 371 241 429 426 3 4 5 4 3 5 155850 18819 1383 18118 43476;43477;43478;43479;43480;43481 50375;50376;50377;50378;50379;50380 50376 6 TCLLNETGDEPFQYK Deamidation (N) 1814.8033 0.80328061 1383 P15105 Glul Glutamine synthetase yes yes 0 1 0 0 5 0 1 71.829 71.829 3 0.01256 26196 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.926 34.949 20.387 0 0 0 0 59.696 19 0 0 0 0 56 1 0 0 0 0 1 3115.7 18820 1383 18118 43482 50381 50381 453 1 TCLLNETGDEPFQYKN Unmodified 1927.8622 0.86219247 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 1 7 2.45 2 3 1 1 1 67.712 67.712 2;3;4 2.7341E-17 24294 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.23 108.19 571.93 353.34 417.7 554.89 426.73 484.83 537 361 416 537 435 464 8 6 5 8 6 7 196790 18821 1383 18119 43483;43484;43485;43486;43487;43488;43489;43490 50382;50383;50384;50385;50386;50387;50388;50389;50390 50382 9 TCLLNETGDEPFQYKN Deamidation (N) 1928.8462 0.84620806 1383 P15105 Glul Glutamine synthetase yes yes 0 1 0 1 5 0 1 70.124 70.124 3 0.0061727 25461 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.257 50.975 78.932 17.091 64.572 97.309 26.148 20.254 74 19 65 93 28 19 2 1 2 2 1 1 5933.8 18822 1383 18119 43491 50391;50392 50392 453 2 TCNISVGR Unmodified 905.4389 0.43889987 2582;2386 Q8BGT8;F7D3N3;Q8K0S0 Phyhipl;Phyhip Phytanoyl-CoA hydroxylase-interacting protein-like;Phytanoyl-CoA hydroxylase-interacting protein no no 0 0 0 0 10 3 1 1 36.725 36.725 2 0.012018 8402 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.087 34.197 59.428 141.29 155.52 149.43 163.15 105.39 56 139 158 148 166 102 1 2 2 2 2 1 28948 18823 2386;2582 18120 43492;43493 50393;50394 50393 2 TCQQTWEK Unmodified 1079.4706 0.47059393 3376 Q9Z1G3;A0A2I3BPD0;A0A2I3BQD9 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 8.67 3.09 1 1 1 43.148 43.148 2 0.007461 12784 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.4 53.542 59.745 59.584 57.717 125.94 152.72 78.884 56 56 56 121 149 74 1 1 1 3 2 1 14584 18824 3376 18121 43494;43495;43496 50395;50396;50397 50397 3 TCSIPIPTIIVK Unmodified 1340.7738 0.77375881 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 0 10 0 1 77.884 77.884 3 3.0444E-05 24037 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.614 59.386 0 0 0 29.927 36.008 38.414 0 0 0 28 37 37 0 0 0 1 1 1 3977.9 18825 2343 18122 43497 50398 50398 1 TCSLTAASCPYFCSVLTK Unmodified 2064.9319 0.93186872 2741 Q91VI7;A0A1B0GSG5 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 9 0 1 74.779 74.779 3 8.9746E-07 24846 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.239 49.92 54.335 25.399 43.646 0 0 49.036 51 28 42 0 0 46 1 1 1 0 0 1 6136 18826 2741 18123 43498 50399 50399 1 TCVADESAANCDK Deamidation (N) 1440.5497 0.54970846 1321 P07724 Alb Serum albumin yes yes 0 1 0 0 2.5 0.5 1 1 41.025 41.025 3 0.00029618 12498 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.365 71.598 29.585 87.826 37.041 0 29.288 39.442 28 85 37 0 28 37 1 2 1 0 1 1 4686.5 18827 1321 18124 43499;43500 50400;50401 50401 388 2 TCVADESAANCDK Unmodified 1439.5657 0.56569288 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6.67 4.5 1 1 1 39.842 39.842 3 4.7688E-14 12044 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 128.54 107.31 365.21 456.96 87.699 260.56 610.29 94.703 343 454 93 250 598 93 3 3 1 2 3 1 64529 18828 1321 18124 43501;43502;43503 50402;50403;50404 50402 3 TCVADESHAGCEK Unmodified 1462.5817 0.58167729 656 CON__P02769 yes yes 0 0 0 0 13 0 1 33.286 33.286 3 8.7072E-05 8196 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.039 78.838 28.834 55.02 156.69 0 48.116 0 28 56 148 0 46 0 1 1 1 0 1 0 7596.7 + 18829 656 18125 43504 50405 50405 1 TDAAMSELVPEPR Unmodified 1414.6762 0.67622961 3384 Q9Z1S5 Sept3 Neuronal-specific septin-3 yes yes 0 0 0 0 3.5 0.5 1 1 61.443 61.443 2;3 2.3348E-12 21619 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.21 74.296 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18830 3384 18126 43505;43506 50406;50407 50407 2 TDAAVSFAK Acetyl (Protein N-term) 950.47091 0.4709115 1607 P51881 Slc25a5 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed yes yes 1 0 0 0 6.25 3.96 1 1 1 1 62.027 62.027 2 3.2443E-05 21969 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 61.962 45.808 719.33 363.68 782.42 227.27 471.35 519.55 676 380 756 231 476 500 5 3 6 4 4 4 207940 18831 1607 18127 43507;43508;43509;43510 50408;50409;50410;50411;50412;50413 50413 6 TDADADSWSEIREDDAAFEAR Unmodified 2369.0044 0.0043762741 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 1.75 0.829 2 1 1 62.824 62.824 3;4 7.7241E-13 20891 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.45 75.938 70.092 65.671 107.08 25.92 142.91 47.671 66 65 104 28 139 47 3 2 4 2 3 2 17236 18832 3449;3451 18129 43511;43512;43513;43514 50414;50415;50416;50417;50418 50414 5 TDAGSLYELTVR Unmodified 1323.667 0.66704513 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 13 0 1 63.327 63.327 3 0.010689 22802 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.189 23.953 49.074 56.275 0 70.041 53.361 58.173 46 56 0 65 56 56 1 1 0 1 1 1 5476.5 18833 2319 18130 43515 50419 50419 1 TDAIPGR Unmodified 728.3817 0.38170256 1294 P00405 Mtco2 Cytochrome c oxidase subunit 2 yes yes 0 0 0 0 8.5 4.5 1 1 36.244 36.244 2 0.026957 9839 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.369 35.66 547.92 160.08 289 228.54 241.14 323.58 513 177 287 229 247 310 2 1 1 1 1 2 51203 18834 1294 18131 43516;43517 50420;50421 50420 2 TDASSASSFLDSDELER Unmodified 1828.7963 0.79628098 931 F7AA45;E9Q8F0;Q8VH51 Rbm39 RNA-binding protein 39 yes no 0 0 0 0 2.5 0.5 1 1 64.312 64.312 3 4.4243E-27 23168 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.22 95.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1999.6 18835 931 18132 43518;43519 50422;50423 50423 2 TDDDAPSLHSETAAR Unmodified 1584.7016 0.70159273 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 1.5 0.5 1 1 34.807 34.807 3 2.0429E-07 8869 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 108.71 82.601 69.103 46.934 68.073 105.31 54.561 77.327 65 46 65 101 56 74 2 1 1 2 1 2 21753 18836 2012 18133 43520;43521 50424;50425 50424 2 TDDEVVQREEEAIQLDGLNASQIR Unmodified 2727.3311 0.33113014 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 1 2.67 0.471 1 2 70.361 70.361 3;4 1.6505E-16 25516 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.121 72.298 9.5708 0 49.601 27.049 31.842 28.939 9 0 47 28 32 28 1 0 3 3 1 1 14135 18837 1324 18134 43522;43523;43524 50426;50427;50428 50426 3 TDDIPVWDQEFLK Unmodified 1604.7722 0.77223848 3325 Q9WTX5 Skp1 S-phase kinase-associated protein 1 yes yes 0 0 0 0 7 3.54 1 1 1 1 81.833 81.833 2;3 7.509E-05 30913 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.633 60.055 155.95 27.179 182.46 128.91 150.36 38.644 149 28 176 130 149 37 4 1 3 3 3 1 27444 18838 3325 18135 43525;43526;43527;43528 50429;50430;50431;50432;50433 50429 5 TDDPLLQLLQK Unmodified 1282.7133 0.71326704 3103 Q9DAR7 Dcps m7GpppX diphosphatase yes yes 0 0 0 0 10.2 2.77 1 1 2 86.259 86.259 2;3 0.00054779 33799 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.927 49.956 20.267 0 20.087 37.838 74.716 58.12 19 0 19 37 75 56 1 0 1 2 2 1 4305.3 18839 3103 18136 43529;43530;43531;43532 50434;50435;50436;50437 50436 4 TDDVHAK Unmodified 784.37153 0.37153181 2744 Q91VR5 Ddx1 ATP-dependent RNA helicase DDX1 yes yes 0 0 0 0 4 0 1 29.693 29.693 3 0.017201 6779 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.757 25.778 39.076 75.414 41.118 88.268 0 99.138 37 74 46 83 0 93 1 1 1 1 0 1 3152 18840 2744 18137 43533 50438 50438 1 TDDYLDQPCCETINR Unmodified 1898.7775 0.77747657 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 5.5 4.39 1 1 1 1 52.932 52.932 2;3 1.6236E-11 17497 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.75 101.5 49.176 85.507 72.255 108.78 126.64 126.44 46 84 74 103 130 122 1 2 3 2 3 3 41934 18841 2132 18138 43534;43535;43536;43537 50439;50440;50441;50442 50439 4 TDDYLDQPCLETINR Unmodified 1851.8309 0.83089235 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 5 4.05 1 2 1 1 63.684 63.684 2;3 1.1232E-25 22549 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 144.12 126.32 169.33 129.02 136.41 39.608 148.7 145 159 130 130 37 148 140 5 3 4 1 2 3 233590 18842 1595 18139 43538;43539;43540;43541;43542 50443;50444;50445;50446;50447;50448 50447 6 TDEFQLHTNVNDGTEFGGSIYQK Unmodified 2599.1827 0.18267499 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 7.67 3.82 1 2 1 2 66.57 66.57 3;4 7.8515E-35 23733 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.87 113.87 334.38 213.15 291.88 198.32 45.497 176.72 315 223 288 195 46 167 5 4 3 3 1 3 52873 18843 978;2097 18140 43543;43544;43545;43546;43547;43548 50449;50450;50451;50452;50453;50454 50450 6 TDEGHPFK Unmodified 929.4243 0.42429566 2583;2279 Q7M6W1;A3QM89;Q8K0T0 Rtn1 Reticulon;Reticulon-1 no no 0 0 0 0 7.5 3.2 1 2 1 36.301 36.301 3 0.0098819 8292 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.486 0 451.72 332.43 441.59 348.25 581 495.1 425 348 443 347 587 480 3 3 3 2 3 3 51702 18844 2279;2583 18141 43549;43550;43551;43552 50455;50456;50457;50458 50456 4 TDEGTYR Unmodified 840.36136 0.36136105 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 2 0.816 1 1 1 27.072 27.072 2 0.025329 5992 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.75 60.552 108.89 158.12 94.775 232.02 264.81 172.05 102 157 92 222 269 167 2 3 1 3 3 2 88447 18845 71;74;949;1367 18142 43553;43554;43555 50459;50460;50461 50461 3 TDEHVIDQGDDGDNFYVIER Unmodified 2336.0193 0.019298057 68 A0A0A6YX73;Q8K1M3;P12367;A0A0A6YY28 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 1.67 0.471 1 2 60.517 60.517 3;4 2.8634E-49 21026 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 153.25 129.92 39.396 17.764 56.709 79.384 102.38 19.437 37 19 56 75 102 19 2 1 3 2 4 1 47454 18846 68 18143 43556;43557;43558 50462;50463;50464;50465;50466;50467 50466 6 TDESQPWVLPVVR Unmodified 1524.7936 0.79364262 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 7.5 2.63 1 2 1 1 1 72.333 72.333 2;3 1.2452E-13 25876 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.43 96.019 108.24 176.32 218.21 49.199 121.21 214.01 102 176 212 47 120 204 2 5 4 2 2 4 129390 18847 1311 18144 43559;43560;43561;43562;43563;43564 50468;50469;50470;50471;50472;50473 50469 6 TDFAPQLQSLNK Unmodified 1360.6987 0.69867961 2636 Q8R164 Bphl Valacyclovir hydrolase yes yes 0 0 0 0 8 0 1 65.939 65.939 2 0.006672 21405 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.799 37.582 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18848 2636 18145 43565 50474 50474 1 TDFDKVVDEYSLNSGK Unmodified 1815.8527 0.85267365 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 1 5.33 0.471 2 1 68.927 68.927 3;4 1.1378E-16 24168 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 127.22 104.56 207.39 181.31 156.4 221.72 94.201 254.22 195 186 158 213 102 241 3 3 2 3 2 3 27339 18849 1055 18146 43566;43567;43568 50475;50476;50477 50477 3 TDFFIGGEEGMAEK Unmodified 1529.6708 0.67080988 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 6 0 1 71.634 71.634 3 0.047086 25583 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.751 19.398 0 0 0 49.263 53.986 67.749 0 0 0 46 56 65 0 0 0 1 1 1 1765.9 18850 1207 18147 43569 50478 50478 1 TDGAAPNVAPSDVGGGGGTNR Unmodified 1868.8613 0.86128127 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 6.33 4.78 1 1 1 42.66 42.66 3 2.5566E-08 12779 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.315 44.449 48.414 56.926 0 68.976 188.98 191.82 46 56 0 65 190 185 2 1 0 1 2 2 24404 18851 1362 18148 43570;43571;43572 50479;50480;50481 50480 3 TDGDTLLQR Unmodified 1017.5091 0.50908792 898 E9Q517;E9Q3V0;P28571 Slc6a9 Transporter;Sodium- and chloride-dependent glycine transporter 1 yes no 0 0 0 0 4 0 1 45.045 45.045 2 0.025895 13909 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.892 19.59 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18852 898 18149 43573 50482 50482 1 TDGDYDYLIK Acetyl (Protein N-term) 1243.5608 0.56084872 2885 Q99P58 Rab27b Ras-related protein Rab-27B yes yes 1 0 0 0 3 0 1 75.403 75.403 2 0.0035832 28340 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.405 31.575 7.4428 0 11.466 8.9449 11.095 0 7 0 11 9 11 0 1 0 1 1 1 0 3780.5 18853 2885 18150 43574 50483 50483 1 TDGFGIDTCR Unmodified 1140.487 0.48697227 143 A0A0R4IZW8;O88456;A0A0R4J1C2 Capns1 Calpain small subunit 1 yes no 0 0 0 0 4.5 0.5 1 1 51.154 51.154 2 0.00058545 16517 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.608 68.606 39.701 0 0 39.57 46.298 0 37 0 0 37 46 0 1 0 0 1 1 0 5057.5 18854 143 18151 43575;43576 50484;50485 50485 2 TDGLVSLLTTSK Unmodified 1233.6816 0.68163256 3300 Q9R0N0 Galk1 Galactokinase yes yes 0 0 0 0 9 0 1 77.837 77.837 3 5.6548E-07 26339 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.001 65.537 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18855 3300 18152 43577 50486 50486 1 TDGQGEDPPEVLEEEK Unmodified 1770.7796 0.77956828 2725 Q8VIM9 Irgq Immunity-related GTPase family Q protein yes yes 0 0 0 0 1.5 0.5 1 1 56.996 56.996 3 1.5109E-05 19345 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.569 61.058 40.602 0 28.908 28.881 0 59.696 38 0 28 28 0 56 2 0 1 1 0 2 13721 18856 2725 18153 43578;43579 50487;50488 50488 2 TDHGAEIVYK Unmodified 1131.556 0.55603811 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 7.25 3.49 1 1 1 1 42.818 42.818 3 0.0008457 13081 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.488 53.271 604.73 816.29 1113.1 199.61 856.13 1061.8 570 823 1085 198 844 1019 2 4 4 1 3 4 75045 18857 572;46 18154 43580;43581;43582;43583 50489;50490;50491;50492 50489 4 TDIANLAEEFK Unmodified 1249.619 0.6190323 2843 Q99KI0;A0A2R8W744 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 6 0.816 1 1 1 77.017 77.017 3 0.00077501 28643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.451 52.425 39.274 47.526 48.648 8.3014 84.16 96.736 37 47 47 9 84 93 2 2 2 1 3 3 10740 18858 2843 18155 43584;43585;43586 50493;50494;50495 50493 3 TDISTALK Unmodified 847.4651 0.46509784 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.5 2.69 1 1 1 1 53.585 53.585 2 0.00039856 16248 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 153.78 81.64 1557 1284.3 1420.3 919.55 1370.5 1686.7 1465 1328 1429 925 1406 1619 5 5 5 4 5 5 113570 18859 154 18156 43587;43588;43589;43590 50496;50497;50498;50499;50500 50497 5 TDITYPAGFMDVISIDK Unmodified 1884.9179 0.91791644 1730 P62702 Rps4x 40S ribosomal protein S4, X isoform yes yes 0 0 0 0 7.5 0.5 1 1 89.345 89.345 3 0.001832 32313 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.723 26.145 0 0 0 0 19.564 9.0357 0 0 0 0 19 9 0 0 0 0 1 1 1231 18860 1730 18157 43591;43592 50501;50502 50502 2 TDKELIATVR Unmodified 1144.6452 0.64518747 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 1 6 0 1 49.678 49.678 3 0.0049023 15161 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.554 32.211 109.09 71.38 0 67.898 167.33 123.15 102 74 0 65 167 120 1 1 0 1 1 1 6113 18861 2059 18158 43593 50503 50503 1 TDLALILSAGDN Unmodified 1201.619 0.6190323 1359 P12658 Calb1 Calbindin yes yes 0 0 0 0 8.67 3.09 1 1 1 87.644 87.644 2 0.00071368 34493 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.029 61.127 79.836 102.24 84.068 65.691 83.278 96.762 75 102 83 65 83 93 2 3 3 3 2 3 20909 18862 1359 18159 43594;43595;43596 50504;50505;50506;50507 50506 4 TDLDLDGYVSGQEVK Unmodified 1637.7784 0.77844607 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 4 0 1 68.641 68.641 3 0.011571 24656 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 41.542 13.572 29.856 37.355 0 20.767 0 29.848 28 37 0 19 0 28 1 1 0 1 0 1 3787.2 18863 2095 18160 43597 50508 50508 1 TDLEELSLGPR Unmodified 1228.6299 0.62993134 260 A0A1B0GS63;Q8K221;A0A1B0GSM3 Arfip2 Arfaptin-2 yes no 0 0 0 0 4 0 1 64.422 64.422 2 7.798E-06 22861 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.258 44.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18864 260 18161 43598 50509 50509 1 TDLGSSSSGDTR Unmodified 1181.516 0.51602379 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 6.67 4.5 1 1 1 31.312 31.312 2 2.2026E-32 8003 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 183.78 150.97 84.24 36.342 57.82 57.762 0 160.06 79 37 56 56 0 153 2 1 1 1 0 3 20839 18865 1999 18162 43599;43600;43601 50510;50511;50512 50510 3 TDLLLEPYNK Unmodified 1204.634 0.63395408 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 6.5 0.5 1 1 69.553 69.553 2;3 0.0021269 23814 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.465 38.108 39.613 17.545 0 20.767 0 29.848 37 19 0 19 0 28 1 1 0 1 0 1 1889 18866 2696 18163 43602;43603 50513;50514 50514 2 TDLNPDNLQGGDDLDPNYVLSSR Unmodified 2517.1619 0.16193955 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 4.88 3.3 1 3 1 1 1 1 73.527 73.527 3;4 6.0299E-28 27048 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.07 113.19 267.91 194.59 167.34 213.5 204.87 193.18 251 195 168 205 205 185 10 7 6 6 6 7 508920 18867 1883 18164 43604;43605;43606;43607;43608;43609;43610;43611 50515;50516;50517;50518;50519;50520;50521;50522;50523;50524;50525;50526;50527;50528 50522 14 TDLNPDNLQGGDDLDPNYVLSSR Deamidation (N) 2518.146 0.14595513 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 1 0 0 3 0.816 1 1 1 75.22 75.22 3 6.7313E-15 28356 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 85.777 77.785 0 9.576 32.46 5.1941 33.603 49.554 0 9 30 5 33 47 0 1 1 1 2 2 16667 18868 1883 18164 43612;43613;43614 50529;50530;50531 50530 775 3 TDLQGDTPR Unmodified 1001.4778 0.47778779 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 0 3 0 1 36.477 36.477 2 0.0054895 10441 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.358 38.938 48.757 55.393 54.029 67.193 33.598 58.737 46 56 56 65 37 56 1 1 1 1 1 1 4648 18869 466 18165 43615 50532 50532 1 TDLTDYLNR Unmodified 1109.5353 0.53530267 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 7.5 3.2 1 2 1 61.562 61.562 2;3 3.3095E-05 21797 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.78 89.998 527.44 298.96 547.3 440.67 358.1 425.78 496 323 543 437 374 409 4 4 4 3 2 2 148690 18870 2998 18166 43616;43617;43618;43619 50533;50534;50535;50536 50536 4 TDLVPAFQNLMK Unmodified 1375.717 0.71697221 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 11.2 1.79 1 1 2 82.197 82.197 2;3 2.2321E-07 28347 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.67 57.167 122.47 65.795 219.87 42.151 171.21 81.019 115 69 209 47 167 78 3 2 4 2 4 2 48705 18871 2272 18167 43620;43621;43622;43623 50537;50538;50539;50540;50541 50537 5 TDMAGLMER Acetyl (Protein N-term) 1064.4631 0.46306571 2996 Q9CYT6;D3YTR7 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 1 0 0 0 2 0 1 65.366 65.366 2 0.011877 23328 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.161 41.227 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2512.7 18872 2996 18168 43624 50542 50542 1 TDMDNQIVVSDYAQMDR Unmodified 1999.8615 0.86154055 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 3 0 1 64.78 64.78 3 0.008194 23328 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 40.515 32.923 9.3378 18.958 37.586 28.364 0 0 9 19 37 28 0 0 1 1 1 1 0 0 2115.9 18873 1824 18169 43625 50543 50543 1 TDMFQTVDLYEGK Unmodified 1545.7021 0.70211 1531 P37804 Tagln Transgelin yes yes 0 0 0 0 6 0 1 75.519 75.519 3 0.050938 27419 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.432 16.02 50.146 25.978 25.857 58.99 35.992 0 47 28 28 56 37 0 1 1 1 1 1 0 3307.3 18874 1531 18170 43626 50544 50544 1 TDMIDQEESIS Unmodified 1266.5286 0.52856232 3292 Q9QZE7 Tsnax Translin-associated protein X yes yes 0 0 0 0 1 0 1 61.639 61.639 2 0.0037339 20418 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.954 52.628 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1705.7 18875 3292 18171 43627 50545 50545 1 TDNTLNQR Unmodified 960.46247 0.46247208 2780 Q91Z31;A0A0G2JGW0;Q3V328 Ptbp2 Polypyrimidine tract-binding protein 2 yes no 0 0 0 0 4 0 1 28.627 28.627 2 0.026664 6196 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.301 40.658 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 6221.1 18876 2780 18172 43628 50546 50546 1 TDNTNSQLVVR Acetyl (Protein N-term) 1287.6419 0.64189301 192 A0A0R4J0X8;A0A1B0GRS3 yes no 1 0 0 0 2 0 1 45.825 45.825 2 7.722E-06 14310 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.46 88.963 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18877 192 18173 43629 50547 50547 1 TDPATPVVKPVPEAPK Unmodified 1644.9087 0.90867238 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 1 6 0 1 53.391 53.391 3 0.011447 16990 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.294 25.461 0 29.329 27.685 19.117 0 20.254 0 28 28 19 0 19 0 1 1 1 0 1 2462.5 18878 1275 18174 43630 50548 50548 1 TDPPIIEGNMESAK Unmodified 1500.713 0.71300904 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 5 0 1 58.446 58.446 3 4.0687E-05 19958 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.974 79.135 0 48.944 0 0 48.116 0 0 46 0 0 46 0 0 1 0 0 1 0 7121.9 18879 1362 18175 43631 50549 50549 1 TDPPIIEGNMESAK Deamidation (N) 1501.697 0.69702463 1362 P12960 Cntn1 Contactin-1 yes yes 0 1 0 0 6 0 1 58.302 58.302 3 0.028305 19280 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.184 28.393 0 59.584 0 49.243 55.013 37.872 0 56 0 46 56 37 0 1 0 1 1 1 3053.2 18880 1362 18175 43632 50550 50550 437 1 TDPQGFFFYWTDQNK Unmodified 1892.837 0.836964 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8 0 1 87.531 87.531 3 0.0011801 31570 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.169 34.805 39.516 36.703 0 0 0 29.848 37 37 0 0 0 28 1 1 0 0 0 1 2996.3 18881 3373 18176 43633 50551 50551 1 TDPSIMGGMIVR Unmodified 1275.6315 0.63152802 3110 Q9DB20;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 7 0 1 64.812 64.812 2 0.05742 21454 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.796 20.988 79.182 43.605 0 71.045 0 108.73 74 46 0 65 0 102 1 1 0 1 0 1 7275.9 18882 3110 18177 43634 50552 50552 1 TDPSTLTEEEVR Unmodified 1375.6467 0.64670362 2023 Q3V3R1 Mthfd1l Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 0 1.5 0.5 1 1 48.743 48.743 2 9.0082E-10 15548 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.44 84.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18883 2023 18178 43635;43636 50553;50554 50554 2 TDPTTLTDDEINR Unmodified 1489.6896 0.68963106 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 2.5 0.5 1 1 51.748 51.748 2;3 1.3906E-20 16974 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 152.54 78.817 29.712 47.748 15.344 68.363 0 29.848 28 47 19 65 0 28 1 1 1 2 0 1 12300 18884 2804 18179 43637;43638 50555;50556 50555 2 TDQEDLLAQELENLSK Unmodified 1844.9004 0.90035212 1290 O89084 Pde4a cAMP-specific 3',5'-cyclic phosphodiesterase 4A yes yes 0 0 0 0 4 0 1 86.258 86.258 3 0.00053922 32785 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.851 36.47 20.387 0 0 9.4714 19.439 0 19 0 0 9 19 0 1 0 0 1 1 0 1856.3 18885 1290 18180 43639 50557 50557 1 TDQFPLFLIIMGK Unmodified 1521.8265 0.82652266 1622 P54731 Faf1 FAS-associated factor 1 yes yes 0 0 0 0 12 0 1 104.88 104.88 3 0.0060751 29194 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.298 19.609 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18886 1622 18181 43640 50558 50558 1 TDQPPQAK Unmodified 883.43995 0.43994572 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 8 3.56 1 1 1 33.639 33.639 2 0.011506 8109 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.162 34.995 0 196.19 102.3 135.39 163.15 124.37 0 186 111 130 166 120 0 3 3 2 3 2 13856 18887 1957 18182 43641;43642;43643 50559;50560;50561 50559 3 TDQVIQSLIALVNDPQPEHPLR Unmodified 2482.318 0.31798668 412 A0A338P786;P68037;A0A338P7E5 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 0 0 0 9.67 1.6 1 3 1 1 92.558 92.558 3;4;5 5.0989E-15 32843 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.905 74.858 39.324 117.43 56.932 9 37.045 105.5 37 112 56 9 37 102 3 4 3 1 2 4 30008 18888 412 18183 43644;43645;43646;43647;43648;43649 50562;50563;50564;50565;50566;50567;50568;50569;50570 50566 9 TDQVIQSLIALVNDPQPEHPLR Deamidation (N) 2483.302 0.30200227 412 A0A338P786;P68037;A0A338P7E5 Ube2l3 Ubiquitin-conjugating enzyme E2 L3 yes no 0 1 0 0 13 0 1 92.413 92.413 4 5.5854E-06 36791 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.734 31.935 0 0 38.774 28.293 0 0 0 0 37 28 0 0 0 0 1 1 0 0 3862 18889 412 18183 43650 50571 50571 109 1 TDRPLPENPYHSR Unmodified 1580.7696 0.76955314 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 1 5.33 0.471 2 1 34.708 34.708 3;4 0.0088058 8167 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.436 28.185 147.76 73.687 179.92 119.9 117.67 118.44 139 74 176 121 120 112 2 1 3 2 2 2 19132 18890 3145 18184 43651;43652;43653 50572;50573;50574 50574 3 TDRPQFQNR Unmodified 1160.5687 0.56866849 2698 Q8VDM6 Hnrnpul1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 1 5 0 1 28.491 28.491 3 0.0052359 5769 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.318 26.258 0 20.216 0 9.837 0 20.254 0 19 0 9 0 19 0 1 0 1 0 1 1375.6 18891 2698 18185 43654 50575 50575 1 TDSAINR Unmodified 775.38243 0.38243085 2519 Q8CBE3;H3BJB3 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 4 0 1 27.162 27.162 2 0.043851 5591 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.178 32.163 0 0 86.872 65.867 0 0 0 0 83 65 0 0 0 0 1 1 0 0 7008.4 18892 2519 18186 43655 50576 50576 1 TDSATDTTAPK Unmodified 1106.5091 0.5091475 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 3.5 0.5 1 1 36.225 36.225 2 4.6746E-05 9753 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.973 60.955 37 29.792 0 20.767 0 20.254 37 28 0 19 0 19 1 1 0 1 0 1 5883.7 18893 1412 18187 43656;43657 50577;50578 50578 2 TDSEDLQR Unmodified 962.4305 0.43050325 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 1 0 1 30.715 30.715 2 3.9318E-07 7116 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 169.57 78.504 325.49 216.76 295.79 245.13 441.66 0 306 229 297 248 433 0 1 1 1 1 1 0 72771 18894 2490 18188 43658 50579 50579 1 TDSFSCNVR Unmodified 1084.4608 0.46075752 2 A0A075B5P3;A0A0A6YVP0;P01867 Ighg2b;Igh-3 Ig gamma-2B chain C region yes no 0 0 0 0 5 0 1 40.351 40.351 2 0.042265 11325 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.59 27.846 49.065 26.028 27.243 27.933 55.663 47.448 46 28 28 28 56 46 1 1 1 1 1 1 1618.2 18895 2 18189 43659 50580 50580 1 TDSPSCEYSR Unmodified 1200.4717 0.47171614 2820 Q924C1 Xpo5 Exportin-5 yes yes 0 0 0 0 2 0 1 31.342 31.342 2 0.022748 7712 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.981 35.552 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1208.8 18896 2820 18190 43660 50581 50581 1 TDSQSEAVAIQAIR Unmodified 1487.758 0.7579854 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 4 0 1 53.781 53.781 2 0.0018832 18127 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.519 30.826 0 0 19.708 19.071 27.744 19.462 0 0 19 19 28 19 0 0 1 1 1 1 1974.9 18897 1980 18191 43661 50582 50582 1 TDSSPNQAR Unmodified 974.44174 0.44173664 963 F7DCW4;E9QMW9;Q8CB58;Q8BGJ5;Q922I7 Ptbp1 yes no 0 0 0 0 3 0 1 20.525 20.525 2 0.0013939 3235 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102.61 45.879 10.607 14.033 8.8426 0 14.644 0 10 14 9 0 14 0 1 1 1 0 1 0 1630.9 18898 963 18192 43662 50583 50583 1 TDSTSSNSTGPSGR Deamidation (N) 1353.5644 0.56443055 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 1 0 0 1.5 0.5 2 2 24.201 24.201 2 3.4669E-20 4665 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.63 93.368 34.269 13.236 9.0875 14.602 15.422 59.456 32 14 9 14 16 56 2 1 1 1 2 3 10038 18899 1999 18193 43663;43664;43665;43666 50584;50585;50586;50587 50587 797 4 TDSTSSNSTGPSGR Unmodified 1352.5804 0.58041496 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 2.5 0.5 1 1 22.502 22.502 3 3.5878E-05 3988 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.927 77.899 0 24.472 0 25.725 26.961 33.343 0 23 0 24 28 32 0 2 0 2 2 2 3687.1 18900 1999 18193 43667;43668 50588;50589 50589 2 TDTDAELDLVSR Unmodified 1333.6361 0.63613893 2804 Q922D8;A0A1W2P733;A0A1W2P7L5 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 2.5 0.5 2 2 57.524 57.524 2;3 3.3629E-06 20043 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.56 72.082 39.516 36.703 0 160.19 97.154 105.96 37 37 0 149 103 102 1 1 0 4 3 3 21679 18901 2804 18194 43669;43670;43671;43672 50590;50591;50592;50593 50593 4 TDTGEPMGR Unmodified 962.41274 0.4127447 1322 P07901;B7ZC50 Hsp90aa1 Heat shock protein HSP 90-alpha yes no 0 0 0 0 4.6 4.32 1 1 1 1 1 31.685 31.685 2 1.2898E-34 8245 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 202.45 123.31 534.53 219.67 505.7 444.29 402.99 462.87 502 241 495 441 416 445 5 3 2 4 2 3 79300 18902 1322 18195 43673;43674;43675;43676;43677 50594;50595;50596;50597;50598 50596 5 TDVAAPFGGFK Unmodified 1108.5553 0.55530983 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 9.25 2.28 1 1 1 1 66.994 66.994 2;3 0.00074702 24403 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.867 54.675 39.015 114.46 123.99 39.227 161.85 47.194 37 112 120 37 158 46 1 3 2 1 3 1 13311 18903 2633 18196 43678;43679;43680;43681 50599;50600;50601;50602 50602 4 TDVETTYADFIASGR Acetyl (Protein N-term) 1686.7737 0.77369504 1779 P63248;A0A0A6YXS7 Pkia cAMP-dependent protein kinase inhibitor alpha yes no 1 0 0 0 2.5 0.5 1 1 83.35 83.35 2 7.8461E-22 30959 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.864 50.885 0 0 13.41 0 5.0519 5.1858 0 0 13 0 5 5 0 0 3 0 1 1 5080.5 18904 1779 18197 43682;43683 50603;50604;50605;50606 50605 4 TDVLGVHEAEAEEPEAGKSEAEDDEEDEVDDLPSSR Unmodified 3897.6672 0.66718346 2109 Q61097;Q5SXE4;A0A2I3BR95 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 1 1 0 1 60.135 60.135 5 1.404E-11 19655 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.612 50.48 0 0 19.75 18.139 19.041 0 0 0 19 18 19 0 0 0 1 1 1 0 3868.6 18905 2109 18198 43684 50607 50607 1 TDVNYTQLVDLHAR Unmodified 1643.8267 0.82673367 1251 O70325;S4R1E5 Gpx4 Phospholipid hydroperoxide glutathione peroxidase, mitochondrial;Glutathione peroxidase yes no 0 0 0 0 8 3.56 1 1 1 59.745 59.745 3 3.0809E-05 20014 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.69 47.075 78.896 48.014 171.02 143.54 47.137 166.02 74 46 167 139 46 157 1 1 3 2 1 3 20833 18906 1251 18199 43685;43686;43687 50608;50609;50610 50609 3 TDYMVGSYGPR Unmodified 1244.5496 0.54957253 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 13 0 1 52.041 52.041 2 0.018152 17338 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.293 31.634 0 0 80.068 0 65.015 86.623 0 0 74 0 65 83 0 0 1 0 1 1 5215.8 18907 2889 18200 43688 50611 50611 1 TDYNASVSVPDSSGPER Unmodified 1779.7911 0.79113602 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 0 7 4.94 1 1 1 2 48.423 48.423 2;3 1.8805E-33 15555 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 149.82 119.9 81.975 93.806 29.103 89.945 137.3 152.47 77 93 28 84 139 149 3 2 1 2 3 4 41829 18908 613 18201 43689;43690;43691;43692;43693 50612;50613;50614;50615;50616 50614 5 TDYNASVSVPDSSGPER Deamidation (N) 1780.7752 0.77515161 613 B2M1R6;P61979;H3BKD0;A0A286YDM3;H3BK96;H3BKI8;A0A286YCM2;A0A286YEC4;A0A286YDH1;Q8BT23 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 1 0 0 3 0 1 50.403 50.403 3 0.00087264 16900 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.298 36.16 20.134 28.121 18.769 0 19.197 19.706 19 28 19 0 19 19 1 1 1 0 1 1 5119.8 18909 613 18201 43694 50617 50617 178 1 TEADGNSDPNSDGPLGPR Unmodified 1797.7765 0.77654859 64 A0A0A6YY37;A0A0A6YY09;A0A0A6YWY8;F8VPK8 Pcdh9 yes no 0 0 0 0 2 0 1 42.763 42.763 3 0.0035117 13073 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.981 33.193 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18910 64 18202 43695 50618 50618 1 TEALQEELK Unmodified 1059.5448 0.54480473 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 4 0 1 55.356 55.356 2 0.015037 18845 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.056 29.295 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18911 2208 18204 43696 50619 50619 1 TEAPAAAGPEAK Unmodified 1111.551 0.55095274 2769 Q91XV3 Basp1 Brain acid soluble protein 1 yes yes 0 0 0 0 4 0 1 39.607 39.607 2 8.3045E-12 11366 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.51 71.904 20.147 47.585 0 0 0 0 19 46 0 0 0 0 1 1 0 0 0 0 5495.3 18912 2769 18205 43697 50620 50620 1 TEAPAAAK Unmodified 757.39702 0.39701828 2399 Q8BH80;Q9QY76 Vapb Vesicle-associated membrane protein-associated protein B yes no 0 0 0 0 5 0 1 34.62 34.62 2 0.014908 8541 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.568 46.922 59.671 0 70.029 0 0 49.036 56 0 65 0 0 46 1 0 1 0 0 1 4116.8 18913 2399 18206 43698 50621 50621 1 TEATLEAEQTR Unmodified 1247.5994 0.59935949 529 A2AVJ7;Q99PL5 Rrbp1 Ribosome-binding protein 1 yes no 0 0 0 0 2 0 1 38.94 38.94 2 0.0019793 11380 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.045 54.302 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1835.4 18914 529 18207 43699 50622 50622 1 TEAVSPTVSQLSAVFENSEPPGALTSGK Unmodified 2802.3923 0.39233342 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4;Q8BMP0;H3BKE7 Ppp1r9a yes no 0 0 0 0 7 0 1 83.867 83.867 4 1.8401E-05 30491 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.919 35.365 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2155.8 18915 1119 18208 43700 50623 50623 1 TECAETPR Unmodified 962.41274 0.4127447 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 1 0 1 26.803 26.803 2 0.044011 5222 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.073 43.054 20.044 47.298 17.619 0 19.874 0 19 46 19 0 19 0 1 1 1 0 1 0 3913.8 18916 2080 18209 43701 50624 50624 1 TECAETPRDEPPADGTLK Unmodified 1985.9 0.90003454 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 1 3 0 1 43.914 43.914 3 0.003615 13743 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 46.621 39.64 0 0 0 0 28.62 19.437 0 0 0 0 28 19 0 0 0 0 1 1 2980 18917 2080 18210 43702 50625 50625 1 TECALLGFLLDLK Unmodified 1491.8007 0.80070184 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 0 9.5 1.12 1 1 1 1 104.16 104.16 3 7.8401E-05 36377 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.469 57.093 9.5391 28.799 34.946 0 0 28.924 9 28 35 0 0 28 1 2 3 0 0 2 13997 18918 1096 18211 43703;43704;43705;43706 50626;50627;50628;50629;50630 50626 5 TECALLGFLLDLKR Unmodified 1647.9018 0.90181287 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 1 10 0 1 93.382 93.382 3 0.00021329 30371 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.615 56.309 0 0 0 40.441 0 44.772 0 0 0 37 0 42 0 0 0 1 0 1 5452.2 18919 1096 18212 43707 50631 50631 1 TECALLGFVLDLK Unmodified 1477.7851 0.78505177 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 10.5 2.5 1 1 98.659 98.659 3 8.254E-05 35335 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.431 56.215 0 39.368 0 0 29.288 0 0 37 0 0 28 0 0 1 0 0 1 0 817.78 18920 487 18213 43708;43709 50632;50633 50632 2 TECDIQDVEFAR Unmodified 1481.6457 0.64565776 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 0 2.5 0.5 1 1 56.624 56.624 2 2.0341E-20 19761 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 157.68 115.6 12.734 13.835 12.09 0 23.239 23.855 12 14 12 0 23 23 1 1 1 0 1 1 3183.3 18921 3053 18214 43710;43711 50634;50635 50635 2 TECGLLGFVLDLR Unmodified 1491.7755 0.77554972 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 8.5 0.5 1 1 95.535 95.535 3 0.0007888 34538 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.76 47.82 9 0 20.173 8.6347 0 0 9 0 19 9 0 0 1 0 1 1 0 0 2978.3 18922 1042 18215 43712;43713 50636;50637 50636 2 TECGLLGFVTDLK Unmodified 1451.733 0.7330162 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 9.33 2.62 1 1 1 87.486 87.486 2;3 0.0002388 32284 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.716 44.924 88.676 17.545 49.525 20.767 0 20.254 83 19 46 19 0 19 2 1 1 1 0 1 7103.5 18923 928 18216 43714;43715;43716 50638;50639;50640 50638 3 TECLIQQYEAVSLLNSER Unmodified 2152.047 0.047033132 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750;A0A0A0MQH5 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 6 0 1 79.249 79.249 3 0.01473 29113 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.09 19.173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18924 581 18217 43717 50641 50641 1 TECPNTNEGK Unmodified 1148.4768 0.47680152 2517 Q8CAQ8;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4 0 1 33.064 33.064 3 0.0079964 8249 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.198 42.179 0 0 87.847 43.979 56.556 0 0 0 83 46 56 0 0 0 1 1 1 0 4666.3 18925 2517 18218 43718 50642 50642 1 TECYGYALGDATR Unmodified 1475.6351 0.63509307 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 4.5 0.5 2 2 52.531 52.531 2;3 6.8095E-05 17170 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.91 79.118 0 99.551 27.822 152.14 16.85 109.32 0 94 28 141 19 103 0 4 1 4 1 4 12436 18926 2080 18219 43719;43720;43721;43722 50643;50644;50645;50646 50645 4 TEDLIQSVLTEVEAQTIEELK Unmodified 2387.2319 0.23191659 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 13 0 1 115.33 115.33 3 5.6571E-11 44919 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.729 72.905 0 0 0 7.5625 4.7042 5.1958 0 0 0 7 5 5 0 0 0 1 1 1 892.89 18927 3373 18220 43723 50647 50647 1 TEDQRNEEK Unmodified 1147.5105 0.51054449 1772 Z4YKV1;P63094;A2A610 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short yes no 0 0 0 1 3 0 1 24.569 24.569 3 0.05072 4885 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.092 25.706 0 0 0 28.996 85.486 0 0 0 0 28 83 0 0 0 0 1 1 0 2049.2 18928 1772 18221 43724 50648 50648 1 TEDTQHCGEGK Unmodified 1260.5041 0.5040789 60 A0A0A6YWH4;A0A0A6YWF5;A0A0A6YX60;Q9DCP2 Slc38a3 Sodium-coupled neutral amino acid transporter 3 yes no 0 0 0 0 2.5 0.5 1 1 26.645 26.645 3 0.00038414 5810 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.182 64.402 73.488 37.349 60.638 37.505 35.33 48.028 69 37 60 37 37 46 2 1 2 1 1 1 5578 18929 60 18222 43725;43726 50649;50650 50650 2 TEDVEPQSVPLLAR Unmodified 1552.8097 0.80968662 1408 P18052;Q91V35;A0A2R8VHH6 Ptpra Receptor-type tyrosine-protein phosphatase alpha;Receptor-type tyrosine-protein phosphatase yes no 0 0 0 0 4 0 1 62.784 62.784 3 0.0046854 22229 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 48.704 25.328 0 19.892 19.365 0 38.702 0 0 19 19 0 37 0 0 1 1 0 1 0 2559.2 18930 1408 18223 43727 50651 50651 1 TEEFCEIFR Unmodified 1229.5387 0.53867349 1986 Q3UHL1;A0A0A6YW88;A0A0A6YXI7 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 7.75 3.11 1 1 1 1 68.143 68.143 2 0.00087344 24868 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.84 81.768 217.24 191.95 174.09 220.78 134.56 252 204 195 176 213 139 240 3 3 2 3 2 3 48968 18931 1986 18224 43728;43729;43730;43731 50652;50653;50654;50655 50655 4 TEEGLGFNIMGGK Unmodified 1351.6442 0.6442012 1284 O88952 Lin7c Protein lin-7 homolog C yes yes 0 0 0 0 6 0 1 71.228 71.228 3 0.0030231 25421 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.875 26.489 0 40.432 0 0 38.702 0 0 38 0 0 37 0 0 1 0 0 1 0 1623.8 18932 1284 18225 43732 50656 50656 1 TEEGPTLSYGR Unmodified 1208.5673 0.56733108 2602 Q8K310;A0A087WSU2 Matr3 Matrin-3 yes no 0 0 0 0 9 4 1 1 44.615 44.615 2 6.0924E-08 13589 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.91 82.215 59.794 58.093 75.008 28.575 92.651 96.494 56 55 74 28 93 93 1 1 2 1 2 2 9974.8 18933 2602 18226 43733;43734 50657;50658 50658 2 TEEISEVK Unmodified 933.46549 0.46549177 384 A0A2I3BQZ9;P12023;A0A2I3BPT1;Q3TWF3 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 0 3.67 0.471 1 2 47.144 47.144 2;3 0.0055754 14907 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.26 29.452 108.28 89.646 180.48 114.59 119.94 155.37 102 93 177 112 120 148 2 2 3 2 2 2 15753 18934 384 18227 43735;43736;43737 50659;50660;50661 50661 3 TEELGHPR Unmodified 937.46174 0.4617438 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 6.67 4.5 1 1 1 27.248 27.248 3 0.00053765 6210 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.67 80.949 48.943 85.274 47.984 0 182.52 76.452 46 84 46 0 177 74 1 3 1 0 3 2 17282 18935 2743 18228 43738;43739;43740 50662;50663;50664 50662 3 TEEPIEK Unmodified 844.41781 0.4178133 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 3.5 0.5 1 1 42.163 42.163 2;3 0.018598 13005 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.01 54.236 49.128 160.83 173.78 0 169.43 152.93 46 157 167 0 167 148 1 2 1 0 1 1 17046 18936 728 18229 43741;43742 50665;50666 50665 2 TEEVIVIAK Acetyl (Protein N-term) 1042.591 0.59102664 1231 O55033;A0A0J9YUK4;A0A087WQT7 Nck2 Cytoplasmic protein NCK2 yes no 1 0 0 0 4 0 1 73.304 73.304 2 0.0093915 26905 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.027 13.689 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 2790.8 18937 1231 18230 43743 50667 50667 1 TEEVLVGLPLSSIIEIR Unmodified 1867.0666 0.066629587 2670 Q8R570;B2FDF6;I7HFU4;I7HPB1;J3JS29;B2FDF7;I7HIK2 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 7.5 0.5 1 1 95.24 95.24 3 0.0004698 34426 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.495 30.832 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 3147.9 18938 2670 18231 43744;43745 50668;50669 50669 2 TEFDRELDR Unmodified 1179.552 0.55201537 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 1 3 0.816 1 1 1 43.091 43.091 3 0.00032167 13198 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 123.75 64.152 365.56 189.81 255.76 237.69 202.1 260.73 343 191 256 231 210 250 4 2 3 3 3 3 97355 18939 1055 18232 43746;43747;43748 50670;50671;50672;50673 50670 4 TEFIPLLDGDEK Unmodified 1375.6871 0.68711187 1464 P27546;Q78TF3 Map4 Microtubule-associated protein 4 yes no 0 0 0 0 7.75 3.11 1 1 1 1 79.338 79.338 2;3 4.7491E-07 29888 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.26 79.551 128.77 54.126 132.79 89.103 95.65 107.11 121 56 130 84 93 102 3 2 3 1 2 2 21210 18940 1464 18233 43749;43750;43751;43752 50674;50675;50676;50677 50674 4 TEFLSFMNTELAAFTK Unmodified 1848.8968 0.89678707 1598 P50543 S100a11 Protein S100-A11 yes yes 0 0 0 0 9 0 1 101.51 101.51 3 1.5385E-05 36040 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.697 53.996 0 15.724 14.107 26.484 0 12.792 0 15 15 25 0 12 0 1 1 1 0 1 1180.5 18941 1598 18234 43753 50678 50678 1 TEFWLISAPGEK Acetyl (Protein N-term) 1418.7082 0.70818166 3376 Q9Z1G3;A0A2I3BPD0;A0A2I3BQD9 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 1 0 0 0 6 1 1 1 94.023 94.023 2 1.2803E-08 34799 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.359 25.13 31.849 28.209 33.331 42.316 48.201 103.09 30 28 33 40 49 98 2 1 2 2 2 3 13138 18942 3376 18235 43754;43755 50679;50680;50681 50681 3 TEGDSPAAALSPQMHQEPVQQDFSGK Unmodified 2754.2555 0.25552236 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 58.93 58.93 4 0.0013961 20455 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.746 25.944 39.465 26.847 16.992 39.428 0 0 37 28 19 37 0 0 1 1 1 1 0 0 3884.5 18943 3449;3451 18236 43756 50682 50682 1 TEGGYYQITGR Unmodified 1243.5833 0.5833155 2882 Q99NB1 Acss1 Acetyl-coenzyme A synthetase 2-like, mitochondrial yes yes 0 0 0 0 5 0 1 46.926 46.926 2 0.027724 14505 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.597 29.254 0 0 0 20.056 37.781 0 0 0 0 19 37 0 0 0 0 1 1 0 1758 18944 2882 18237 43757 50683 50683 1 TEGHEETPLPPAQSQTQEGGPAAGK Unmodified 2516.1779 0.17792396 2295 Q7TSJ2;A0A140LIT9;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 3.5 0.5 1 1 43.564 43.564 4 2.2939E-16 13836 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.917 58.115 0 48.007 56.059 46.04 47.705 0 0 46 56 46 46 0 0 1 1 2 1 0 9512.8 18945 2295 18238 43758;43759 50684;50685 50684 2 TEGLSVLNQAMAVIK Unmodified 1572.8545 0.85452832 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 10 0 1 86.513 86.513 3 2.4639E-05 27665 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.678 43.451 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2739.6 18946 2269 18239 43760 50686 50686 1 TEGSLEGCLDCLLQALAQNNAETSEK Unmodified 2850.3012 0.30115192 919;937 E9Q6Q4;A0A0G2JGC8;A0A0G2JF70;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 6.5 0.5 1 1 101.11 101.11 4 1.2373E-07 36709 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.986 44.675 9.5623 12.028 5.7222 11.865 17.815 13.618 9 12 6 11 18 13 1 1 1 1 2 1 3651.3 18947 919;937 18240 43761;43762 50687;50688 50688 2 TEIEGTQK Unmodified 904.45018 0.45017606 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 4.5 0.5 1 1 39.366 39.366 2 0.0055472 10801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.84 43.666 148.21 82.986 87.889 136.03 43.484 49.036 139 83 83 130 46 46 2 1 1 2 1 1 13098 18948 3261 18241 43763;43764 50689;50690 50690 2 TEISFRPNDPK Unmodified 1302.6568 0.65681479 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 1 7.43 2.44 1 2 2 1 1 48.193 48.193 3;4 6.3238E-06 15098 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.46 75.129 6829.1 4751.1 7424.7 6138.5 6171.2 7356.5 6428 4983 7410 6117 6375 7064 8 6 8 7 6 7 770220 18949 1369 18242 43765;43766;43767;43768;43769;43770;43771 50691;50692;50693;50694;50695;50696;50697;50698 50698 8 TEISVESK Unmodified 891.45493 0.45492709 3361 Q9Z0P5;A0A1L1STC8;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 5 0 1 46.261 46.261 2 0.012807 14224 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.37 32.359 59.555 0 89.506 0 46.477 47.71 56 0 83 0 46 46 1 0 1 0 1 1 6644.6 18950 3361 18243 43772 50699 50699 1 TEIVPDRDGSDPYQEPK Unmodified 1944.9065 0.90650013 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 1 3.5 0.5 1 1 50.006 50.006 3 0.00050903 16710 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.513 41.375 20.387 19.588 37.595 58.967 0 29.848 19 19 37 56 0 28 1 1 1 2 0 1 7485.4 18951 441 18244 43773;43774 50700;50701 50700 2 TELATQEK Unmodified 918.46583 0.46582612 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 41.225 41.225 3 0.0058299 11708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.492 33.274 39.317 45.864 25.644 38.218 36.946 0 37 46 28 37 37 0 1 1 1 1 1 0 2882.1 18952 3266 18245 43775 50702 50702 1 TELDAHFENLLAR Unmodified 1527.7682 0.76815616 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 6 1 1 1 66.478 66.478 3 0.00010138 23677 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.813 54.383 0 85.944 0 30.604 0 59.696 0 83 0 28 0 56 0 2 0 1 0 1 19037 18953 533 18246 43776;43777 50703;50704 50703 2 TELDSPR Unmodified 816.39775 0.39774656 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 3 0.816 1 1 1 34.258 34.258 2 3.8622E-10 9329 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 177.71 105.69 1175.4 730.96 923.95 817.41 392.71 844.97 1104 776 925 805 392 794 3 3 2 3 2 2 149860 18954 2479 18247 43778;43779;43780 50705;50706;50707 50706 3 TELEDTLDSTAAQQELR Unmodified 1918.912 0.91197944 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 2.5 0.5 1 1 64.752 64.752 3 5.9668E-06 23358 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.783 50.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18955 2696 18248 43781;43782 50708;50709 50709 2 TELNQTVQELEETLK Unmodified 1773.8996 0.89962384 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 7 3.54 1 1 1 1 86.161 86.161 3 1.657E-13 32866 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 125.14 95.078 49.84 67.024 67.845 0 76.425 28.503 47 65 65 0 74 28 2 2 2 0 2 1 22353 18956 3402 18249 43783;43784;43785;43786 50710;50711;50712;50713 50710 4 TELNQTVQELEETLK Deamidation (N) 1774.8836 0.88363942 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 1 0 0 4 0 1 91.996 91.996 3 6.1411E-05 34000 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.615 42.557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18957 3402 18249 43787 50714 50714 1146 1 TELSQSDMFDQR Unmodified 1455.63 0.63000769 2474 Q8BWY3 Etf1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 0 4 0 1 55.335 55.335 3 0.00061008 18832 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.224 48 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 1188.7 18958 2474 18250 43788 50715 50715 1 TELTPAYF Unmodified 940.4542 0.45419881 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;A0A0G2JGY0 Qdpr Dihydropteridine reductase yes no 0 0 0 0 7.4 2.87 1 2 1 1 75.501 75.501 2 0.004592 27375 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.69 94.723 57.742 64.771 166.87 39.943 111.3 135.4 56 65 158 37 111 130 2 1 2 1 2 3 54097 18959 2464 18251 43789;43790;43791;43792;43793 50716;50717;50718;50719;50720;50721 50718 6 TELTTLEEVLSVR Unmodified 1488.8035 0.80353861 3058 Q9D3A9;A0A0U1RPU8 Ttyh1 Protein tweety homolog 1 yes no 0 0 0 0 6 0 1 86.112 86.112 3 2.1558E-07 32208 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.15 79.612 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 4781.8 18960 3058 18252 43794 50722 50722 1 TELVSISSSEDEGNLR Unmodified 1734.8272 0.82718718 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 4 0 1 58.5 58.5 3 0.0027031 20230 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.873 28.46 0 19.431 46.929 37.644 0 29.848 0 19 46 37 0 28 0 1 1 1 0 1 1777.9 18961 581 18253 43795 50723 50723 1 TENDHINLK Unmodified 1082.5356 0.53563702 1059 G3UZ60;G3UWI9;G3UWX9;G3UZA7;Q9Z172 Sumo3 Small ubiquitin-related modifier;Small ubiquitin-related modifier 3 yes no 0 0 0 0 5 0 1 41.064 41.064 3 0.0606 11651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 38.75 9.4028 60.088 0 0 78.638 119.32 75.479 56 0 0 74 120 74 1 0 0 1 1 1 4253.9 18962 1059 18254 43796 50724 50724 1 TENLLGSYFPK Unmodified 1267.6449 0.64485312 1067 G3UXZ5;P97371;G3UXY0;G3X9K9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 9 0 1 73.228 73.228 3 0.00058654 24165 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.088 43.86 69.522 44.256 0 61.208 0 78.884 65 46 0 56 0 74 1 1 0 1 0 1 5024.9 18963 1067 18255 43797 50725 50725 1 TENPLVLIDEVDK Unmodified 1483.777 0.77698951 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 5 0 1 81.642 81.642 3 9.1429E-05 30974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.499 49.114 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1729.1 18964 2539 18256 43798 50726 50726 1 TEPQWVPVSWVY Unmodified 1489.7242 0.72416608 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 10.5 2.5 1 1 95.342 95.342 2 0.013092 34431 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.608 34.278 6.3721 35.644 6.1088 9.837 0 0 6 34 6 9 0 0 1 2 1 1 0 0 4579.1 18965 3341 18257 43799;43800 50727;50728 50727 2 TEPVEAEVESTPHPQPLSTEK Unmodified 2304.1121 0.11213581 3345;369 A0A286YDY4;A0A286YCY1;A0A286YCT6;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 3.25 0.829 1 1 2 55.02 55.02 3;4 7.7838E-20 18633 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.517 85.023 59.631 36.608 73.746 78.156 0 89.544 56 37 74 74 0 84 2 1 2 2 0 2 28603 18966 369;3345 18258 43801;43802;43803;43804 50729;50730;50731;50732 50732 4 TEPVTLEHER Unmodified 1209.599 0.59896556 2865 Q99LR1;D6RFU2;D6RI21 Abhd12 Monoacylglycerol lipase ABHD12 yes no 0 0 0 0 3 0 1 35.572 35.572 3 1.6355E-05 9917 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.52 61.205 0 39.064 18.214 0 46.807 38.106 0 37 19 0 46 37 0 1 1 0 1 1 4327.2 18967 2865 18259 43805 50733 50733 1 TEQEDVLAK Unmodified 1031.5135 0.5135046 559 A6XDB1;A6XDB0;B1PSD9;B2KF57;B2KF84;F6QFD1;E9PVU7;Q01063;F6YIS2 Pde4d cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes no 0 0 0 0 4 0 1 48.716 48.716 3 0.0017954 15687 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.465 49.35 29.737 27.31 28.508 0 38.044 19.168 28 28 28 0 37 19 1 1 1 0 1 1 1701 18968 559 18260 43806 50734 50734 1 TEQGPQVDETQFK Unmodified 1505.6998 0.69980182 1562 P47738;A0A0G2JEU1 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 8 5 1 1 51.242 51.242 3;4 8.2165E-05 16774 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.636 69.167 19.922 153.53 155.23 119.64 178.6 0 19 148 157 121 176 0 1 2 2 2 2 0 11362 18969 1562 18261 43807;43808 50735;50736 50736 2 TEQLTDSTEISLLPSDIDR Unmodified 2132.0485 0.04847292 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9 4 1 1 75.6 75.6 3 1.258E-08 28647 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.568 60.988 29.904 47.37 37.17 37.89 17.821 48.527 28 47 37 37 19 46 1 2 1 1 1 2 15105 18970 2179 18262 43809;43810 50737;50738 50738 2 TEQMTLR Acetyl (Protein N-term) 919.44332 0.44331654 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 1 0 0 0 2.5 0.5 1 1 46.167 46.167 2 0.025837 14385 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.467 66.528 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 9104 18971 1792 18263 43811;43812 50739;50740 50739 2 TEQSAAAR Unmodified 832.40389 0.40389457 2199 Q6KAU4 Mvb12b Multivesicular body subunit 12B yes yes 0 0 0 0 2.5 0.5 1 1 19.245 19.245 2 0.015223 2870 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.998 18.686 9.5582 25.802 9.1631 12.818 34.701 38.452 9 25 9 12 35 37 1 2 1 1 2 2 1980 18972 2199 18264 43813;43814 50741;50742 50742 2 TEQSGSELSSR Unmodified 1179.5368 0.53675924 3239 Q9JKY5 Hip1r Huntingtin-interacting protein 1-related protein yes yes 0 0 0 0 2.5 0.5 1 1 29.725 29.725 2 2.9723E-06 6904 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.707 49.489 20.171 7.7188 29.731 0 27.961 38.644 19 9 28 0 28 37 1 1 1 0 1 1 1821.9 18973 3239 18265 43815;43816 50743;50744 50743 2 TEQSVTPEQQK Unmodified 1273.615 0.61500956 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 5.83 3.34 1 2 1 1 1 37.181 37.181 2;3 1.4665E-13 9865 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.41 107 403.01 441.42 480.2 439.97 422.91 124.01 379 445 484 436 426 120 4 5 5 6 5 1 154980 18974 2133 18266 43817;43818;43819;43820;43821;43822 50745;50746;50747;50748;50749;50750;50751 50751 7 TEQYVELHK Unmodified 1145.5717 0.57168818 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 5 0 1 46.835 46.835 3 0.0012422 14432 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.596 44.071 88.661 0 66.896 67.058 0 49.036 83 0 65 65 0 46 1 0 1 1 0 1 5849.6 18975 416 18267 43823 50752 50752 1 TESLVTR Unmodified 804.43413 0.43413207 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 5 0 1 37.688 37.688 2 0.018664 10044 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.92 24.225 159.31 113.94 179.19 178.05 193.32 193.83 150 120 180 176 199 187 1 1 1 1 1 1 19171 18976 1348 18268 43824 50753 50753 1 TESPAEGKEQEEK Unmodified 1460.6631 0.66308196 2602 Q8K310;A0A087WSP7;A0A087WQZ1 Matr3 Matrin-3 yes no 0 0 0 1 3 0 1 37.073 37.073 3 0.00028097 10692 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.157 53.619 98.89 70.542 91.277 103.66 126.95 124.3 93 74 93 102 130 120 1 1 1 1 1 1 7942 18977 2602 18269 43825 50754 50754 1 TESSEALK Unmodified 863.42363 0.42362696 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.33 4.03 1 1 1 39.028 39.028 2 0.0047911 10766 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.25 35.956 59.389 64.099 63.188 141.28 0 211.33 56 65 65 139 0 204 1 1 1 2 0 2 23968 18978 510 18270 43826;43827;43828 50755;50756;50757 50757 3 TESSEALKAEK Unmodified 1191.5983 0.59829686 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 9 4 1 1 41.498 41.498 3 0.01104 11909 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.401 35.528 227.24 155.57 88.163 85.464 146.82 232.46 213 162 88 83 148 222 2 2 1 1 1 1 15625 18979 510 18271 43829;43830 50758;50759 50759 2 TESSTCEPQSR Unmodified 1280.5303 0.53029365 2706 Q8VE88 Fam114a2 Protein FAM114A2 yes yes 0 0 0 0 1.67 0.471 1 2 24.33 24.33 2;3 0.00021014 4639 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.213 54.865 20.387 0 0 19.144 28.193 19.45 19 0 0 18 28 19 1 0 0 2 1 1 3229.5 18980 2706 18272 43831;43832;43833 50760;50761;50762 50762 3 TESTETGAR Unmodified 950.4305 0.43050325 472 A2AIS0;A2AIR9;A2AIR7;O55017 Cacna1b Voltage-dependent N-type calcium channel subunit alpha-1B yes no 0 0 0 0 1 0 1 21.185 21.185 2 0.0054085 3296 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 83.623 33.599 20.195 38.006 0 30.088 27.42 14.142 19 37 0 28 28 14 1 1 0 1 1 1 2242.1 18981 472 18273 43834 50763 50763 1 TETDFSNLFAQDLLPAK Unmodified 1908.9469 0.94690838 1578 P48318;D3Z5S3;D3Z1L8 Gad1 Glutamate decarboxylase 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 88.997 88.997 3 5.8565E-06 32180 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.977 75.276 58.773 61.45 17.567 48.921 42.731 20.254 55 61 18 46 43 19 2 2 2 2 2 1 15816 18982 1578 18274 43835;43836;43837;43838 50764;50765;50766;50767 50766 4 TETLSSGK Unmodified 821.41306 0.41306227 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 6 0 1 39.19 39.19 2 0.0088982 10303 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.64 41.054 68.619 81.679 120.02 102.66 88.915 106.19 65 83 120 102 93 102 1 1 1 1 1 1 7937.5 18983 1999 18275 43839 50768 50768 1 TETQEKNPLPSK Unmodified 1370.7042 0.70415892 1421 P20065 Tmsb4x Thymosin beta-4;Hematopoietic system regulatory peptide yes yes 0 0 0 1 6 0 1 44.043 44.043 3 0.0033113 12536 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.401 37.41 48.961 0 66.657 76.909 0 127.92 46 0 65 74 0 120 1 0 1 1 0 1 6729.8 18984 1421 18276 43840 50769 50769 1 TETSEDDLGDK Unmodified 1208.5045 0.50445605 2681 Q8VCD6 Reep2 Receptor expression-enhancing protein 2 yes yes 0 0 0 0 2 0 1 43.446 43.446 2 0.004695 13332 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 67.726 20.834 29.87 0 29.298 19.021 0 0 28 0 28 19 0 0 1 0 1 1 0 0 2278.8 18985 2681 18277 43841 50770 50770 1 TETVCTFQDGALVQHQQWDGK Unmodified 2447.1176 0.11757231 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 5 0 2 61.589 61.589 3;4 3.2095E-07 21532 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.276 53.473 0 48.323 37.135 0 38.702 0 0 46 37 0 37 0 0 1 1 0 1 0 4495 18986 1887 18278 43842;43843 50771;50772 50772 2 TETYDDYKDETTIDDSIMDADSLWVDTQDDDR Unmodified 3785.5534 0.55339926 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 6.67 4.5 1 1 1 87.202 87.202 4 4.9483E-37 31601 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.873 83.183 24.497 28.427 6.4706 5.2788 15.85 18.736 23 28 6 5 16 18 2 1 1 1 2 2 7424.3 18987 1424 18279 43844;43845;43846 50773;50774;50775 50773 3 TEVIDNTLNPDFVR Unmodified 1631.8155 0.81550028 2573 Q8JZW4;A0A0R4J0J1;Q1RLL3;Q9DC53;Q9CYR4;E9Q1V2 Cpne5;Cpne9;Cpne8 Copine-5;Copine-9;Copine-8 yes no 0 0 0 0 13 0 1 67.605 67.605 3 0.0061059 24856 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.545 35.26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18988 2573 18280 43847 50776 50776 1 TEVLSEDLLQVEK Unmodified 1501.7876 0.78755419 2060 Q5SSM3 Arhgap44 Rho GTPase-activating protein 44 yes yes 0 0 0 0 5 0 1 74.895 74.895 3 0.00064708 27695 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.295 32.561 0 48.344 35.889 27.938 28.005 0 0 46 37 28 28 0 0 1 1 1 1 0 4020.3 18989 2060 18281 43848 50777 50777 1 TEVNSGFFYK Unmodified 1190.5608 0.56078914 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 7 0 1 63.009 63.009 2 0.0028657 20610 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.054 47.37 39.366 66.506 0 29.94 35.311 58.688 37 65 0 28 37 56 1 1 0 1 1 1 5984.1 18990 1826 18282 43849 50778 50778 1 TEVPGPR Unmodified 754.39735 0.39735263 1702 P61922;Q3TUE8;F7C9G3 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 7 4.32 1 1 1 33.354 33.354 2 2.8781E-10 7975 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 178.24 110.36 245.28 212.55 316.17 239.5 429.62 144.84 231 213 315 241 426 139 2 2 3 2 3 1 47698 18991 1702 18283 43850;43851;43852 50779;50780;50781 50780 3 TEVSVSDK Unmodified 863.42363 0.42362696 168 A0A0R4J0B4;Q99KK2 Cmas N-acylneuraminate cytidylyltransferase yes no 0 0 0 0 5 0 1 41.707 41.707 2 0.014396 11977 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.474 33.756 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18992 168 18284 43853 50782 50782 1 TEVVDSDGSK Unmodified 1035.472 0.47203371 2567 Q8JZN5 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 0 0 0 3 0 1 40.768 40.768 3 0.0010668 12383 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.2 52.929 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18993 2567 18285 43854 50783 50783 1 TEVVETTQVYTEEETRR Unmodified 2068.9913 0.99129239 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 1 3 0.816 1 1 1 49.981 49.981 3 1.549E-08 16236 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.54 66.244 0 39.368 0 29.94 35.311 58.688 0 37 0 28 37 56 0 1 0 1 1 1 6714.3 18994 3266 18286 43855;43856;43857 50784;50785;50786 50786 3 TEWEAATPAVAETPDIK Acetyl (Protein N-term) 1869.8996 0.89962384 723 D3YYM6;D3Z1S8;Q91V55;P97461 Rps5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 1 0 0 0 2.33 0.471 2 1 77.556 77.556 2;3 3.4032E-17 29370 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.089 54.722 0 0 9.738 9.4018 51.55 14.264 0 0 9 9 51 14 0 0 1 1 3 1 14705 18995 723 18287 43858;43859;43860 50787;50788;50789 50789 3 TEWLDGK Unmodified 847.40758 0.40758296 1404 P17742;A0A1L1SST0;F8VPN3 Ppia;Gm5160 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 7.62 2.34 1 2 2 1 1 1 58.831 58.831 2;3 0.0091591 20295 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 124.83 55.659 2616 2329.8 3055.4 2059.6 2837.8 2537.5 2464 2385 3050 2065 2882 2451 9 8 10 6 8 7 962480 18996 1404 18288 43861;43862;43863;43864;43865;43866;43867;43868 50790;50791;50792;50793;50794;50795;50796;50797;50798;50799 50790 10 TEYLSNADER Unmodified 1196.5309 0.53094558 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 3.67 0.471 1 2 42.142 42.142 2;3 2.1961E-05 12493 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.4 98.999 39.564 84.113 48.033 30.604 38.702 39.442 37 84 46 28 37 37 1 3 1 1 1 1 15582 18997 3204 18289 43869;43870;43871 50800;50801;50802 50801 3 TEYSVAVQTAVK Unmodified 1294.6769 0.67688153 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 6.33 0.471 2 1 56.096 56.096 2;3 2.3231E-11 18295 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.84 87.093 138.57 186.57 55.608 185.95 164.99 126.98 130 185 56 176 167 121 3 5 1 4 3 3 26407 18998 2582 18290 43872;43873;43874 50803;50804;50805;50806;50807 50803 5 TEYTVAVQTASK Unmodified 1296.6561 0.65614609 2386 Q8BGT8;F7D3N3;F6U6Z2 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 8 3.56 1 1 1 51.813 51.813 2;3 5.9164E-08 17030 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.22 75.503 187.76 42.013 148.01 0 199.32 104.98 176 46 140 0 194 102 3 1 3 0 3 2 22883 18999 2386 18291 43875;43876;43877 50808;50809;50810 50810 3 TFAMPPHSPSLIAPR Unmodified 1620.8446 0.84463234 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 9 0 1 58.966 58.966 3 0.027914 17554 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.638 14.879 0 0 0 0 120 0 0 0 0 0 120 0 0 0 0 0 1 0 5586.5 19000 2077 18292 43878 50811 50811 1 TFAPEEISAMVLTK Unmodified 1535.7905 0.79053108 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 7.5 0.5 1 1 84.383 84.383 2;3 0.0014647 30067 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.44 42.502 0 19.431 94.656 83.566 80.37 106.44 0 19 92 83 84 102 0 1 2 2 2 2 7219.4 19001 1419 18293 43879;43880 50812;50813 50813 2 TFCFTNEGQALYLVSPTEIQR Unmodified 2473.1948 0.19476 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 7 0 1 82.67 82.67 3 0.0001535 29904 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.255 39.311 20.197 28.297 7.9384 0 0 0 19 28 9 0 0 0 1 1 1 0 0 0 2349.5 19002 2041 18294 43881 50814 50814 1 TFCGTPDYIAPEIIAYQPYGK Unmodified 2403.1457 0.14568454 1783;1796;2030;1425 P68404;P63318;Q2NKI4;P20444;Q4VA93;Q3TQ39 Prkcb;Prkcg;Prkca Protein kinase C beta type;Protein kinase C gamma type;Protein kinase C;Protein kinase C alpha type no no 0 0 0 0 8.5 2.69 1 1 1 1 83.208 83.208 3;4 5.3647E-11 32371 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.475 77.819 108.51 113.9 194.6 65.485 206.2 172.94 102 112 186 65 204 167 2 2 3 2 3 2 62525 19003 1796;1783;1425;2030 18295 43882;43883;43884;43885 50815;50816;50817;50818;50819 50819 5 TFCGTPEYLAPEVLEDNDYGR Unmodified 2445.0795 0.079455473 1498;3330 P31750;Q9WUA6 Akt1;Akt3 RAC-alpha serine/threonine-protein kinase;RAC-gamma serine/threonine-protein kinase no no 0 0 0 0 4 0 1 77.671 77.671 3 0.06304 28903 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 26.659 18.762 0 0 0 30.604 0 9.594 0 0 0 28 0 9 0 0 0 1 0 1 4699.6 19004 1498;3330 18296 43886 50820 50820 1 TFCQLILDPIFK Unmodified 1493.7952 0.79522253 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 10.4 1.29 2 2 2 1 92.746 92.746 2;3 0.00028389 30283 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.602 47.37 89.589 117.74 64.917 68.38 82.282 112.21 84 116 65 65 83 107 3 3 2 3 4 4 80493 19005 1652 18297 43887;43888;43889;43890;43891;43892;43893 50821;50822;50823;50824;50825;50826;50827;50828 50824 8 TFDANGDGTIDFR Deamidation (N) 1428.6157 0.61573784 2763 Q91X97;D3YVA2;D3Z2Z8;D3Z1M0 Ncald Neurocalcin-delta yes no 0 1 0 0 3.5 0.5 1 1 63.991 63.991 2 0.0025365 22805 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.161 35.121 60.088 0 0 20.767 0 59.696 56 0 0 19 0 56 2 0 0 1 0 2 14899 19006 2763 18298 43894;43895 50829;50830 50830 989 2 TFDANGDGTIDFR Unmodified 1427.6317 0.63172225 2763 Q91X97;D3YVA2;D3Z2Z8;D3Z1M0 Ncald Neurocalcin-delta yes no 0 0 0 0 4 0 1 61.874 61.874 3 0.033061 21815 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 38.511 19.731 0 0 49.772 0 37.054 47.979 0 0 46 0 37 46 0 0 1 0 1 1 1990.3 19007 2763 18298 43896 50831 50831 1 TFDEIASGFR Unmodified 1141.5404 0.54038805 1406 P17809 Slc2a1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 0 0 0 0 7 0 1 66.771 66.771 2 0.00052217 22409 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.862 55.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19008 1406 18299 43897 50832 50832 1 TFDELEQEAK Unmodified 1208.5561 0.55609769 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 60.649 60.649 2 2.5041E-05 21304 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 98.254 44.063 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19009 3449;3451 18300 43898 50833 50833 1 TFDKNGDGTIDFR Deamidation (N) 1485.6736 0.67358707 1737;2392 P62761;Q8BGZ1;F2Z3Z1 Vsnl1;Hpcal4 Visinin-like protein 1;Hippocalcin-like protein 4 no no 0 1 0 1 5.5 0.5 1 1 57.757 57.757 3 0.00068554 19773 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.078 39.898 108.39 215.11 252.03 112.58 276.74 258.6 102 213 250 111 278 250 1 2 2 1 2 2 38724 19010 1737;2392 18301 43899;43900 50834;50835 50834 673 2 TFDLYANVRPCVSIEGYK Unmodified 2131.0408 0.040825542 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 1 8.5 0.5 1 1 71.848 71.848 3 4.5789E-06 23484 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.421 30.144 108.65 79.893 65.344 80.386 51.784 0 102 83 65 78 51 0 2 2 1 2 1 0 13908 19011 307 18302 43901;43902 50836;50837 50837 2 TFDPTTAFVVEDLKPNTEYAFR Unmodified 2560.2486 0.24856971 568 B0V2N1;A0A286YDS2;A0A286YDF6 Ptprs Receptor-type tyrosine-protein phosphatase S yes no 0 0 0 1 8 0 1 83.744 83.744 4 0.0088898 29840 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.663 13.564 49.129 0 38.525 28.308 0 0 46 0 37 28 0 0 1 0 1 1 0 0 2261.8 19012 568 18303 43903 50838 50838 1 TFDSAVAK Unmodified 837.42323 0.42323303 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 7 0 1 49.105 49.105 2 0.008761 14043 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102 33.517 168.97 93.858 195.98 191.36 187.82 214.24 159 102 195 189 195 206 1 1 1 1 1 1 10821 19013 2517 18304 43904 50839 50839 1 TFDTFCPLGPALVTK Unmodified 1665.8436 0.84362928 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 10 2.16 1 1 1 81.928 81.928 3 9.2658E-06 28205 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.022 60.609 79.402 0 58.985 96.107 173.74 173.06 74 0 56 93 176 167 1 0 1 2 3 3 23271 19014 165 18305 43905;43906;43907 50840;50841;50842 50841 3 TFDTNSDGTIDFR Unmodified 1487.6529 0.65285163 1832;1734 P62748;A0A1Y7VMK3;P84075;E9PV73;A2A7R5 Hpcal1;Hpca Hippocalcin-like protein 1;Neuron-specific calcium-binding protein hippocalcin no no 0 0 0 0 6.4 3.38 2 1 1 1 61.419 61.419 2;3 1.1415E-32 21680 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 179.98 133.83 137.09 234.66 381.01 187.32 160.79 333.33 130 231 371 186 167 317 4 3 6 5 4 6 107550 19015 1734;1832 18306 43908;43909;43910;43911;43912 50843;50844;50845;50846;50847;50848;50849;50850 50849 8 TFEGVDPQNTSMR Unmodified 1480.6616 0.66164217 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 8 3.56 1 1 1 51.576 51.576 2;3 1.4981E-23 16938 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 168.85 133.55 39.219 95.324 58.824 49.042 108.69 28.622 37 93 56 46 107 28 1 2 1 1 2 1 26273 19016 1595 18307 43913;43914;43915 50851;50852;50853 50853 3 TFEINPR Unmodified 875.45012 0.45011648 1324 P08113;F7C312 Hsp90b1 Endoplasmin yes no 0 0 0 0 13 0 1 48.381 48.381 2 0.032734 15492 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.097 34.508 118.49 0 103.41 142.63 166.65 103.98 111 0 102 139 169 102 1 0 1 1 1 1 9072.1 19017 1324 18308 43916 50854 50854 1 TFESLVDFCK Unmodified 1244.5747 0.57472465 2127 Q61425 Hadh Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial yes yes 0 0 0 0 7 0 2 77.004 77.004 2;3 0.00074645 27248 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.974 46.565 69.403 36.268 26.669 48.379 74.57 48.274 65 37 28 47 75 46 2 1 1 2 2 1 6400.1 19018 2127 18309 43917;43918 50855;50856 50856 2 TFETVGQDK Unmodified 1023.4873 0.48728985 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 49.189 49.189 2 0.018724 15621 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.19 26.145 39.212 66.079 56.43 0 48.116 69.29 37 65 56 0 46 65 1 1 2 0 1 1 4224.1 19019 2688 18310 43919;43920 50857;50858 50857 2 TFFIEIGEPR Unmodified 1207.6237 0.62372375 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 9.33 2.62 1 1 1 74.968 74.968 2 0.00018962 26289 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.965 51.837 138.15 125.95 168.88 55.549 178.58 86.427 130 129 166 56 176 83 2 2 3 1 3 1 20354 19020 2187 18311 43921;43922;43923 50859;50860;50861 50859 3 TFFLEALR Unmodified 995.54402 0.54401687 1973 Q3UGR5 Hdhd2 Haloacid dehalogenase-like hydrolase domain-containing protein 2 yes yes 0 0 0 0 10 0 1 76.69 76.69 2 0.030162 23542 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.23 44.525 59.326 73.639 65.613 0 125.52 0 56 74 65 0 120 0 1 1 1 0 1 0 51599 19021 1973 18312 43924 50862 50862 1 TFFPEEISSMVLTK Unmodified 1627.8167 0.81674583 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 10 2.16 1 1 1 89.524 89.524 3 5.0508E-05 31537 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.357 53.819 39.402 66.041 115.96 83.294 85.444 0 37 65 111 84 84 0 1 2 2 3 2 0 18169 19022 1397 18313 43925;43926;43927 50863;50864;50865 50864 3 TFFPLALK Unmodified 935.54804 0.54803961 2417 Q8BJH1 Zc2hc1a Zinc finger C2HC domain-containing protein 1A yes yes 0 0 0 0 6.5 5.5 1 1 81.18 81.18 3 0.0028707 22145 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.064 52.223 69.39 27.179 36.579 37.596 74.028 48.028 65 28 37 37 74 46 2 1 1 1 2 1 7631.3 19023 2417 18314 43928;43929 50866;50867 50867 2 TFFSFPAVVAPFK Unmodified 1456.7755 0.77547336 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 6.75 5.76 2 1 1 94.683 94.683 2;3 2.8501E-06 37428 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.771 57.92 142.64 120.78 222.17 134.21 76.983 187.55 134 121 217 132 79 178 5 6 8 6 4 8 37292 19024 3002 18315 43930;43931;43932;43933 50868;50869;50870;50871;50872;50873;50874;50875;50876;50877 50877 10 TFFVHTPNR Unmodified 1117.5669 0.56687757 977 F2Z3X6;Q9Z2A0;F2Z3Z9 Pdpk1 3-phosphoinositide-dependent protein kinase 1 yes no 0 0 0 0 9 0 1 45.641 45.641 3 0.034928 11138 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.185 23.708 48.841 55.627 39.726 47.91 0 78.884 46 56 42 46 0 74 1 1 1 1 0 1 4321.8 19025 977 18316 43934 50878 50878 1 TFGCGSAIASSSLATEWVK Unmodified 1970.9408 0.94077715 741 D3Z0K9;D3Z7W0;Q9D7P6 Iscu Iron-sulfur cluster assembly enzyme ISCU, mitochondrial yes no 0 0 0 0 8 0 1 76.934 76.934 3 0.010826 26605 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.679 19.19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19026 741 18317 43935 50879 50879 1 TFGENYVQELLEK Unmodified 1568.7722 0.77223848 251 A0A1B0GRP7;Q9Z2Y8;A0A1B0GQY5;A0A1B0GRR5;Q6P8V7;A0A1B0GSA1 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 6 0 1 85.149 85.149 2 0.00045913 31799 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.182 50.659 20.228 7.8779 19.983 0 0 39.442 19 9 19 0 0 37 1 1 1 0 0 1 1255.2 19027 251 18318 43936 50880 50880 1 TFGESHPFTK Unmodified 1149.5455 0.54547343 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 9.33 2.62 1 1 1 47.279 47.279 3 0.0049137 13462 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.37 33.578 366.63 286.84 202.56 222.33 374.42 374.14 343 296 204 213 380 361 2 3 2 2 3 3 23049 19028 1446 18319 43937;43938;43939 50881;50882;50883 50881 3 TFGHLLR Unmodified 842.47627 0.47627165 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 10 0.816 1 1 1 45.516 45.516 3 0.0053172 9927 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.986 44.615 20.121 18.373 78.864 0 0 59.696 19 19 74 0 0 56 1 1 2 0 0 2 16399 19029 2697 18320 43940;43941;43942 50884;50885;50886 50885 3 TFGNLQLK Unmodified 919.51272 0.51271674 1089 G3X9V4;Q01097 Grin2b Glutamate receptor ionotropic, NMDA 2B yes no 0 0 0 0 9.5 0.5 1 1 62.851 62.851 2 0.008163 17290 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.56 46.004 132.42 111.27 192.83 0 135.39 138.98 125 116 185 0 134 134 1 1 1 0 1 1 9201.1 19030 1089 18321 43943;43944 50887;50888 50888 2 TFHDPNAIYSELILWR Unmodified 1973.9999 0.99994701 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8 0 1 81.804 81.804 3 4.6701E-06 28857 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.234 57.296 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 5960.3 19031 570 18322 43945 50889 50889 1 TFHETLNCCGSNALTTLTTTILR Unmodified 2623.2734 0.27342103 1525 P35762;A0A140LJL0 Cd81 CD81 antigen yes no 0 0 0 0 10 0.707 1 2 1 78.519 78.519 3;4 1.0227E-09 23862 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.377 50.81 0 78.736 0 79.723 61.643 78.191 0 74 0 74 65 75 0 2 0 3 3 3 13137 19032 1525 18323 43946;43947;43948;43949 50890;50891;50892;50893 50893 4 TFIAIKPDGVQR Unmodified 1343.7561 0.75613491 866;1385 E9PZF0;Q01768;Q5NC79;P15532;Q5NC80 Gm20390;Nme2;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 1 11.5 1.12 1 1 1 1 56.074 56.074 3 5.3901E-06 12709 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 104.24 81.442 2158.4 3360.5 3744 2103 4418.6 2363.8 2032 3354 3735 2081 4380 2288 2 4 3 2 3 3 772560 19033 866;1385 18324 43950;43951;43952;43953 50894;50895;50896;50897 50896 4 TFIDQGK Unmodified 807.41267 0.41266834 3321 Q9WTP7 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes yes 0 0 0 0 7 0 1 50.374 50.374 2 0.032145 14677 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 84.568 29.127 98.184 89.083 194.33 0 197.39 191.58 93 93 185 0 195 185 1 1 1 0 1 1 6394.1 19034 3321 18325 43954 50898 50898 1 TFINLMTHISK Unmodified 1303.6958 0.69584284 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0;A0A0A6YW86 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 4.67 5.19 2 1 74.936 74.936 3 3.4511E-08 17871 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.85 56.755 76.131 148.33 239.57 110.1 43.932 78.884 72 148 234 111 42 74 2 4 3 2 1 2 49818 19035 65 18326 43955;43956;43957 50899;50900;50901;50902;50903 50902 5 TFITQQGIK Unmodified 1034.576 0.57604528 1836 Q3TWV4;P84091;A0A338P6T4 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 11 1.41 1 1 1 1 1 56.717 56.717 2;3 6.5395E-06 14574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 155.07 101.9 396.22 504.57 615.34 510.12 206.46 898.08 372 509 596 490 212 848 2 4 2 3 1 4 125720 19036 1836 18327 43958;43959;43960;43961;43962 50904;50905;50906;50907;50908 50905 5 TFIVLNK Unmodified 833.50109 0.50108942 111 A0A0J9YTW6;B1AWN6;F7AMU5;A2APX8;A2APX9;A0A0R4J1M7;Q9JJV9;G3X8T7;K3W4N7;Q9ER60 Scn2a1;Scn1a;Scn5a;Scn4a Sodium channel protein;Sodium channel protein type 5 subunit alpha;Sodium channel protein type 4 subunit alpha no no 0 0 0 0 11.5 0.5 1 1 65.621 65.621 2 0.0095702 17959 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.96 26.887 319.13 164.79 145.17 282.09 0 168.43 299 167 139 266 0 158 2 1 1 2 0 1 40441 19037 111 18328 43963;43964 50909;50910 50909 2 TFLETSTETALTNEWEK Unmodified 1998.9422 0.94221693 3345;369 A0A286YDY4;A0A286YCY1;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 8 3.56 1 1 1 78.914 78.914 3 6.1006E-13 30266 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.42 93.344 69.453 44.052 146.46 74.958 188.44 77.812 65 47 139 75 186 75 2 3 3 3 4 2 25097 19038 369;3345 18329 43965;43966;43967 50911;50912;50913;50914 50914 4 TFLGQNK Unmodified 806.42865 0.42865276 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 9 0 1 49.876 49.876 2 0.026934 13156 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.123 28.414 118.21 0 149.8 0 145.39 0 111 0 139 0 139 0 1 0 1 0 1 0 67609 19039 3056 18330 43968 50915 50915 1 TFLLEYHNR Unmodified 1191.6037 0.60365701 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 9 0 1 52.551 52.551 3 0.02444 14312 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.561 18.088 0 364.99 316.05 208.77 43.96 68.036 0 348 316 209 46 65 0 2 1 2 1 1 8548.2 19040 2225 18331 43969 50916;50917 50916 2 TFLTLSLQDMASR Unmodified 1481.7548 0.75481428 1269 O88543 Cops3 COP9 signalosome complex subunit 3 yes yes 0 0 0 0 10.5 0.5 1 1 81.31 81.31 2 2.1578E-27 25671 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 176.87 113.44 16.031 41.836 42.279 50.457 30.866 51.353 15 41 42 49 32 49 1 2 1 2 1 2 11771 19041 1269 18332 43970;43971 50918;50919 50918 2 TFLVGER Unmodified 820.4443 0.44430282 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 8 0 1 51.738 51.738 2 0.021983 14688 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.9 42.31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19042 3094 18333 43972 50920 50920 1 TFLVIPELAQELHVWTDK Unmodified 2138.1412 0.14119151 942 E9Q9M1;G3X9J6;Q3V1L4 Nt5c2 Cytosolic purine 5'-nucleotidase yes no 0 0 0 0 9 0 1 99.121 99.121 3 0.0023467 35438 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.131 29.053 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19043 942 18334 43973 50921 50921 1 TFLVWINEEDHLR Unmodified 1670.8417 0.84165545 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 8.62 1.58 1 1 8 3 1 1 1 94.555 94.555 2;3 6.1174E-41 26404 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 192.4 163.34 643.85 472.02 812.74 673.68 591.74 943.19 609 473 790 664 601 904 11 13 12 16 11 14 557910 19044 1883 18335 43974;43975;43976;43977;43978;43979;43980;43981;43982;43983;43984;43985;43986;43987;43988;43989 50922;50923;50924;50925;50926;50927;50928;50929;50930;50931;50932;50933;50934;50935;50936;50937;50938;50939;50940;50941;50942;50943;50944;50945;50946;50947 50925 26 TFPFSEVPEAFLK Unmodified 1510.7708 0.77078192 184 Q924D0;A0A0R4J0S3;D3Z792 Rtn4ip1 Reticulon-4-interacting protein 1, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 89.604 89.604 3 4.5701E-05 31592 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.479 55.717 0 20.216 0 20.437 17.561 40.007 0 19 0 19 19 38 0 1 0 1 1 1 1525.9 19045 184 18336 43990;43991 50948;50949 50949 2 TFPTPIAKPPVFTGK Unmodified 1599.9025 0.90246479 1614 P53395 Dbt Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial yes yes 0 0 0 1 11.5 0.5 1 1 68.585 68.585 3 2.5494E-16 17275 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.47 109.21 119.1 53.232 61.726 0 162.95 67.416 111 51 60 0 158 65 1 1 1 0 2 1 32454 19046 1614 18337 43992;43993 50950;50951 50951 2 TFPTVNPSTGEVICQVAEGNKEDVDK Unmodified 2833.344 0.34400301 1562 P47738;A0A0G2JEU1 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 1 6 0 1 71.027 71.027 4 6.951E-05 25255 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.52 27.264 39.613 17.545 0 0 37.384 38.375 37 19 0 0 37 37 1 1 0 0 1 1 2814.7 19047 1562 18338 43994 50952 50952 1 TFQDGATK Unmodified 866.4134 0.41339662 934;12 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0;A0A0A6YWK1 Clasp2;Clasp1 CLIP-associating protein 2;CLIP-associating protein 1 no no 0 0 0 0 6 0 1 41.396 41.396 2 0.03456 11344 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.915 14.013 59.644 44.302 37.075 0 84.521 66.878 56 46 37 0 83 65 1 1 1 0 1 1 3346.5 19048 934;12 18339 43995 50953 50953 1 TFQLQLLSPSSSVVPAFNTGTITQVIK Unmodified 2875.5695 0.56950992 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 11.5 0.5 1 1 96.339 96.339 3;4 0.012309 31346 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 31.632 18.954 20.387 0 0 30.604 0 0 19 0 0 28 0 0 1 0 0 1 0 0 11490 19049 1436 18340 43996;43997 50954;50955 50954 2 TFQQILEYAYTATLQAK Unmodified 1988.0255 0.025493054 2002 Q3UQ17 Zbtb16 yes yes 0 0 0 0 12 0 1 101.92 101.92 3 3.526E-06 28791 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.081 68.212 0 12.564 12.23 0 0 0 0 12 12 0 0 0 0 1 1 0 0 0 1153.1 19050 2002 18341 43998 50956 50956 1 TFQSTSSGAAYVGGICSLSR Unmodified 2047.9633 0.9633035 2292 Q7TQG7;Q9R1V4 Adam11 Disintegrin and metalloproteinase domain-containing protein 11 yes no 0 0 0 0 1 0 1 63.853 63.853 3 0.0065669 21413 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 36.312 16.989 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19051 2292 18342 43999 50957 50957 1 TFSHELSDFGLESTTGEVPVVAIR Unmodified 2590.2915 0.29149716 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 5 0 1 78.6 78.6 3 9.8747E-11 29477 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.27 54.96 20.178 18.532 19.344 0 29.288 0 19 19 19 0 28 0 1 1 1 0 1 0 3089.1 19052 1470 18343 44000 50958 50958 1 TFSNWPTYPQLYVR Unmodified 1770.873 0.87295558 259 A0A1B0GS58;Q9CQM9 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 10.7 0.943 2 1 77.086 77.086 2;3 2.9212E-20 23688 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.87 104.12 158.23 0 97.19 102.23 183.91 142.93 148 0 93 102 185 139 2 0 1 2 2 2 17985 19053 259 18344 44001;44002;44003 50959;50960;50961 50960 3 TFSYAGFEMQPK Unmodified 1404.6384 0.63838754 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 8.5 0.5 1 1 69.53 69.53 3 0.00215 23153 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.205 34.647 0 58.467 66.822 0 0 0 0 56 65 0 0 0 0 1 1 0 0 0 5058.9 19054 1822 18345 44004;44005 50962;50963 50962 2 TFSYPLDLLLK Unmodified 1308.7329 0.73293985 2025 Q3V493;Q9ES56 Trappc4 Trafficking protein particle complex subunit 4 yes no 0 0 0 0 10.5 0.5 1 1 92.938 92.938 2;3 0.00050358 29944 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.239 40.53 0 29.5 17.471 29.563 0 20.254 0 28 19 28 0 19 0 1 1 1 0 1 4705.3 19055 2025 18346 44006;44007 50964;50965 50965 2 TFTAWCNSHLR Unmodified 1391.6405 0.64045322 418;310;3209 A1BN54;Q7TPR4;O88990;A0A1L1SV25;P57780;Q9JI91 Actn1;Actn3;Actn4;Actn2 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4;Alpha-actinin-2 no no 0 0 0 0 9 0 1 50.574 50.574 3 0.026117 13434 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.426 26.535 0 76.756 118.42 152.93 94.341 155.08 0 74 120 148 102 148 0 1 1 1 1 1 8699.4 19056 418;310;3209 18347 44008 50966 50966 1 TFTDCFNCLPIAAIVDEK Deamidation (N) 2113.97 0.97002836 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 1 0 0 5.5 0.5 1 1 91.699 91.699 3 0.00046118 34690 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.407 38.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19057 1710;1711;1770 18348 44009;44010 50967;50968 50968 665 2 TFTDCFNCLPIAAIVDEK Unmodified 2112.986 0.98601278 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 8.6 2.42 1 1 1 1 1 93.087 93.087 3 9.9103E-08 34455 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.975 63.486 89.248 87.215 126.65 88.218 57.485 166.14 84 88 122 88 60 157 3 3 3 4 2 3 37639 19058 1710;1711;1770 18348 44011;44012;44013;44014;44015 50969;50970;50971;50972;50973;50974 50970 6 TFTPFYFLVEPVDTLSVR Unmodified 2130.1037 0.10374338 952 Q7TQG5;E9QK04;P97798 Neo1 Neogenin yes no 0 0 0 0 9.5 0.5 1 1 102.55 102.55 3 4.3992E-07 33201 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.401 68.567 0 0 0 6.4849 3.8861 0 0 0 0 6 4 0 0 0 0 1 1 0 2369.9 19059 952 18349 44016;44017 50975;50976;50977 50976 3 TFTPGQGNNAYVFPGVALGVIAGGIR Unmodified 2575.3547 0.35470654 2432 Q8BMF3 Me3 NADP-dependent malic enzyme, mitochondrial yes yes 0 0 0 0 11 0.816 1 1 1 93.514 93.514 3 1.2649E-08 26771 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.943 38.069 0 14 0 19 0 19 0 14 0 19 0 19 0 1 0 1 0 1 24019 19060 2432 18350 44018;44019;44020 50978;50979;50980 50980 3 TFTTQETITNAETAK Unmodified 1654.805 0.80499517 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 8.17 3.48 2 1 1 2 56.138 56.138 3;4 9.0196E-31 19071 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.47 136.18 705.52 708.35 1009.4 838.74 596.53 1025.5 665 725 1010 829 623 978 4 6 7 6 3 6 139770 19061 1316 18351 44021;44022;44023;44024;44025;44026 50981;50982;50983;50984;50985;50986;50987 50986 7 TFTTQETITNAETAKEWFLEAAK Unmodified 2629.2912 0.29116281 1316 P06745 Gpi Glucose-6-phosphate isomerase yes yes 0 0 0 1 10 3 1 1 88.819 88.819 4 2.0997E-16 32836 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.07 10.343 20.131 66.38 85.114 37.936 83.757 38.375 19 65 84 37 83 37 1 2 2 1 2 1 8345.7 19062 1316 18352 44027;44028 50988;50989 50988 2 TFTVSSTLDFR Unmodified 1272.635 0.63501672 1072 Q8BLQ9;G3UZM4;D3Z0N3 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 0 7 6 1 1 69.046 69.046 2 0.00026737 25300 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.438 51.217 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1238.6 19063 1072 18353 44029;44030 50990;50991 50991 2 TFVLEVMGR Unmodified 1050.5532 0.55320134 1568;2507;1357 P47857;P12382;Q8C605;Q9WUA3 Pfkm;Pfkl;Pfkp ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type;ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type no no 0 0 0 0 10.7 1.7 1 1 1 72.134 72.134 2 0.0017843 21550 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.033 53.586 443.55 424.92 479.35 324.3 481.96 213.12 417 435 482 324 482 204 3 4 4 3 4 1 105810 19064 1568;1357;2507 18354 44031;44032;44033 50992;50993;50994;50995 50993 4 TFVQENVYDEFVER Unmodified 1773.821 0.82097959 1562 P47738;A0A0G2JEU1;A0A0G2JF60 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 6.75 3.63 1 2 1 73.542 73.542 2;3 4.0179E-18 27021 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.34 100.35 20.244 28.427 40.034 30.604 47.158 78.604 19 28 37 28 47 75 1 1 1 1 2 3 16451 19065 1562 18355 44034;44035;44036;44037 50996;50997;50998;50999 50996 4 TFVSGACDASIK Unmodified 1254.5914 0.59143734 1751 P62880;E9QKR0;D3Z1M1;D3YZX3;E9PWM7 Gnb2 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 55.584 55.584 2;3 3.487E-60 18798 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 213.81 159.1 367.57 552.08 371.19 532.48 673.5 296.5 345 548 380 519 677 287 3 5 4 5 5 2 160160 19066 1751 18356 44038;44039;44040;44041;44042 51000;51001;51002;51003;51004;51005 51005 6 TFVSITPAEVGVLVGK Unmodified 1615.9185 0.91850879 1758 P62962;Q5SX49 Pfn1 Profilin-1;Profilin yes no 0 0 0 0 8.62 3.28 1 2 2 1 1 1 87.311 87.311 2;3 4.4462E-38 30763 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 155.43 133.88 410.23 141.92 19.685 316.92 488.26 319.95 384 139 19 297 490 306 6 3 1 6 7 5 225210 19067 1758 18357 44043;44044;44045;44046;44047;44048;44049;44050 51006;51007;51008;51009;51010;51011;51012;51013;51014;51015;51016;51017;51018 51011 13 TFVSQASATMQQYAQR Unmodified 1815.8574 0.85738187 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 9.5 0.5 1 1 64.644 64.644 3 4.5764E-17 18016 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.33 106.94 78.93 192.58 0 181.08 77.202 224.86 74 186 0 167 83 213 1 2 0 2 1 2 22296 19068 2028 18358 44051;44052 51019;51020 51020 2 TFVVQGFGNVGLHSMR Unmodified 1747.8828 0.88280876 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 65.936 65.936 3 2.699E-68 22241 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 205.12 178.53 205.06 87.252 87.323 122.77 323.62 219.76 192 90 83 117 322 213 4 2 2 3 5 4 165590 19069 1458 18359 44053;44054;44055;44056;44057 51021;51022;51023;51024;51025;51026 51021 6 TFWSPELK Unmodified 1006.5124 0.51238239 2249;1027 Q6PH08;Q3UHT7;A0A1B0GS69;A0A1B0GSU7;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1;V9GX53 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 9 0 1 69.345 69.345 2 0.019852 22301 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.334 38.333 68.501 81.349 140.19 111.85 59.506 97.44 65 83 139 111 65 93 1 1 1 1 1 1 10933 19070 2249;1027 18360 44058 51027 51027 1 TFWSPTAQLDAQQEIK Unmodified 1861.921 0.92102798 1966 Q3UDP0 Wdr41 WD repeat-containing protein 41 yes yes 0 0 0 0 8 0 1 73.171 73.171 3 0.039135 24797 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.697 12.446 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19071 1966 18361 44059 51028 51028 1 TFYAVLK Unmodified 840.47454 0.47454032 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 11 0 2 65.722 65.722 2;3 0.027535 18040 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.62 45.581 0 115.87 133.71 592 94.662 76.183 0 111 130 592 93 74 0 1 1 1 1 1 79442 19072 814 18362 44060;44061 51029;51030 51029 2 TFYGLHQDFPSVVVVGLGK Unmodified 2062.0888 0.088762013 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 10 0 1 80.438 80.438 3 1.2947E-21 25261 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.447 85.408 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19073 2904 18363 44062 51031 51031 1 TGAEGAVLDEAK Unmodified 1159.5721 0.57208211 1481;2139;1507 P28738;Q61768;E9QAK5;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5A no no 0 0 0 0 3.5 0.5 1 1 51.701 51.701 2;3 2.5832E-05 17479 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.961 60.539 39.564 86.708 0 80.882 0 59.696 37 84 0 74 0 56 1 2 0 2 0 1 12613 19074 1481;2139;1507 18364 44063;44064 51032;51033 51032 2 TGAFLLQGFIQDR Unmodified 1464.7725 0.77251325 258 A0A1B0GS13;A0A1B0GT81;A0A1B0GTA4;A0A1B0GSH8;Q07813 Bax Apoptosis regulator BAX yes no 0 0 0 0 10 0 1 82.305 82.305 3 0.007387 26077 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.704 16.181 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19075 258 18365 44065 51034 51034 1 TGAFSIPVIQIVYETLK Unmodified 1878.0503 0.050251242 2744 Q91VR5;A0A1Y7VM48 Ddx1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 0 11.5 0.5 1 1 108.85 108.85 3 7.1126E-09 29767 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.29 86.318 24.553 13.888 25.207 15.986 0 7.462 23 14 24 16 0 7 2 1 2 2 0 1 7518.7 19076 2744 18366 44066;44067 51035;51036;51037;51038 51038 4 TGAFSIPVIQIVYETLKDQQEGK Unmodified 2563.3534 0.35336913 2744 Q91VR5;A0A1Y7VM48 Ddx1 ATP-dependent RNA helicase DDX1 yes no 0 0 0 1 11.5 0.5 1 1 101.52 101.52 4 3.8765E-06 33650 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.909 44.29 0 19.892 19.365 0 37 5.33 0 19 19 0 37 5 0 1 1 0 1 1 4794.6 19077 2744 18367 44068;44069 51039;51040 51039 2 TGAIVDVPVGEELLGR Unmodified 1623.8832 0.88318591 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7 3.33 2 2 2 1 2 76.757 76.757 2;3 6.7903E-41 28502 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 164.68 132.08 535.05 412.08 466.6 353.75 545.01 537.44 503 426 463 343 547 519 9 8 8 6 8 10 688470 19078 1881 18368 44070;44071;44072;44073;44074;44075;44076;44077;44078 51041;51042;51043;51044;51045;51046;51047;51048;51049;51050;51051;51052 51041 12 TGALCWFLDEAAAR Unmodified 1579.7453 0.74531222 2911 Q9CQ60;D3Z4X1 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 8 0.816 1 1 1 86.473 86.473 2;3 2.2972E-07 30155 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.718 59.059 29.923 0 20.407 0 19.874 9 28 0 19 0 19 9 1 0 1 0 1 1 2444.2 19079 2911 18369 44079;44080;44081 51053;51054;51055 51055 3 TGCNVLLIQK Unmodified 1144.6274 0.62742892 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 9 0 2 60.882 60.882 2;3 0.00018845 18351 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.048 36.086 147.54 71.639 28.488 0 103.1 116.18 138 74 28 0 102 111 3 2 1 0 2 2 12354 19080 1824 18370 44082;44083 51056;51057;51058;51059 51057 4 TGDFQLHTNVNNGTEFGGSIYQK 2 Deamidation (N) 2528.1456 0.1455612 2096 Q60930;G3UX26;A0A286YCR8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 2 0 0 5 0 1 66.38 66.38 4 0.0013335 23633 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.523 28.595 69.527 0 36.616 68.863 0 0 65 0 37 65 0 0 1 0 1 1 0 0 2383.4 19081 2096 18371 44084 51060 51060 812;813 1 TGDFQLHTNVNNGTEFGGSIYQK Deamidation (N) 2527.1615 0.16154562 2096 Q60930;G3UX26;A0A286YCR8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 1 0 0 6 0 1 66.177 66.177 4 1.3549E-09 22922 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.871 48.776 59.406 33.926 85.919 34.838 25.663 58.964 56 37 83 37 28 56 1 1 1 1 1 1 8274.4 19082 2096 18371 44085 51061 51061 812;813 1 TGDFQLHTNVNNGTEFGGSIYQK Unmodified 2526.1775 0.17753003 2096 Q60930;G3UX26;A0A286YCR8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 6 0 1 66.191 66.191 3 0.0024689 22962 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.893 31.292 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 3635.2 19083 2096 18371 44086 51062 51062 1 TGDIFTTETSIDR Unmodified 1454.6889 0.68890278 2532 Q8CFX3 Pcdh1 no no 0 0 0 0 13 0 1 59.809 59.809 2 0.0038028 21092 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.224 34.876 0 38.429 56.196 46.929 0 49.036 0 37 56 46 0 46 0 1 1 1 0 1 5847.3 19084 2532 18372 44087 51063 51063 1 TGDPNDPR Unmodified 870.38316 0.38315913 80 A0A0G2JDM6;P21836 Ache Acetylcholinesterase yes no 0 0 0 0 1.5 0.5 1 1 23.474 23.474 2 0.011135 3943 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.662 46.814 20.121 27.556 52.572 19.209 70.496 23.168 19 28 51 19 69 23 1 2 2 1 2 1 7334.4 19085 80 18373 44088;44089 51064;51065 51064 2 TGDTGMLPANYVEAI Unmodified 1550.7287 0.72865911 2140 Q61792 Lasp1 LIM and SH3 domain protein 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 83.394 83.394 2;3 0.00025263 31580 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.198 62.205 0 5.2348 5.0959 0 8.1563 6.1633 0 5 5 0 8 6 0 1 1 0 1 1 8296.6 19086 2140 18374 44090;44091;44092 51066;51067;51068 51066 3 TGDWVAK Unmodified 775.38645 0.38645359 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 7 0 1 50.828 50.828 2 0.026973 14887 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.55 22.868 186.63 110.42 279.9 177.87 0 227.06 176 120 273 178 0 213 1 1 1 1 0 1 12448 19087 2487 18375 44093 51069 51069 1 TGEAIVDAALSALR Unmodified 1385.7514 0.75144346 1933 Q3TML0;Q922R8 Pdia6 Protein disulfide-isomerase A6 yes no 0 0 0 0 8.75 2.49 2 1 1 88.353 88.353 2;3 0.002454 31987 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.262 27.906 0 28.576 0 30.248 27.936 20.254 0 28 0 28 28 19 0 2 0 2 2 1 7704.8 19088 1933 18376 44094;44095;44096;44097 51070;51071;51072;51073 51072 4 TGEGFLCVFAINNTK Unmodified 1669.8134 0.81339179 2126;1505 P32883;C0H5X4;Q61411 Kras;Hras GTPase KRas;GTPase KRas, N-terminally processed;GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 0 10 0.816 1 1 1 81.286 81.286 3 0.00050339 25649 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.861 46.511 48.891 94.468 71.05 69.673 0 49.036 46 93 74 65 0 46 1 2 2 1 0 1 28732 19089 1505;2126 18377 44098;44099;44100 51074;51075;51076 51075 3 TGELPHLR Unmodified 921.50321 0.50321468 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 5 0 1 41.606 41.606 3 0.0090296 11951 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.252 20.171 39.516 36.703 0 0 37.347 39.442 37 37 0 0 37 38 1 1 0 0 1 1 2866.3 19090 728 18378 44101 51077 51077 1 TGENVEDAFLEAAK Unmodified 1492.7046 0.70455285 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 0 0 0 0 6.25 3.96 1 1 1 1 71.848 71.848 3 4.7112E-05 26658 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.759 55.902 236.01 197.48 354.42 162.95 231.78 379.83 222 203 343 158 233 362 5 5 4 3 3 5 72558 19091 2729 18379 44102;44103;44104;44105 51078;51079;51080;51081;51082;51083 51083 6 TGENVEDAFLEAAKK Unmodified 1620.7995 0.79951586 2729 Q91V41;Q50HX3 Rab14 Ras-related protein Rab-14 yes no 0 0 0 1 5.5 0.5 1 1 68.487 68.487 3;4 0.00068832 24699 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.809 47.751 78.676 44.723 84.058 84.173 81.68 67.476 74 46 84 83 84 65 2 1 2 2 2 1 5459.1 19092 2729 18380 44106;44107 51084;51085 51084 2 TGEPEQEAVSR Unmodified 1201.5575 0.55749468 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7 6 1 1 32.204 32.204 2 4.8641E-08 7588 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.12 76.926 20.222 41.926 20.004 25.139 0 44.772 19 41 19 23 0 42 1 2 1 1 0 1 7971.2 19093 2154 18381 44108;44109 51086;51087 51087 2 TGEVVVTSK Unmodified 918.50221 0.50221163 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 8.33 3.4 1 1 1 44.858 44.858 2 0.005294 13640 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.998 49.826 193.14 38.428 56.233 214.82 255.22 47.77 180 37 56 204 255 46 1 1 1 2 2 1 10221 19094 573 18382 44110;44111;44112 51088;51089;51090 51088 3 TGFDFLDNW Unmodified 1113.4767 0.47672516 2496 Q8C3W1 Uncharacterized protein C1orf198 homolog yes yes 0 0 0 0 6 0 1 100.54 100.54 2 0.051321 37242 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.676 42.409 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1047.8 19095 2496 18383 44113 51091 51091 1 TGFLEIDEHMR Unmodified 1346.6289 0.62888548 1588 P49443;Q9EQE2 Ppm1a Protein phosphatase 1A yes no 0 0 0 0 5 0 1 58.826 58.826 3 0.017208 20190 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.915 28.051 0 38.603 45.776 37.713 0 0 0 37 46 37 0 0 0 1 1 1 0 0 1718.6 19096 1588 18384 44114 51092 51092 1 TGFPAPGAR Unmodified 872.45045 0.45045083 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 7.5 0.5 1 1 42.575 42.575 2 0.0027638 11002 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.561 61.982 68.91 82.488 177.13 179.79 107.67 135.51 65 83 176 176 111 130 1 1 2 2 1 1 34608 19097 144 18385 44115;44116 51093;51094 51093 2 TGFSLDNGDLR Deamidation (N) 1194.5517 0.55168102 3000 Q9CZ44;A2AT02 Nsfl1c NSFL1 cofactor p47 yes no 0 1 0 0 4 0 1 60.181 60.181 2 0.049839 21097 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.555 20.948 39.701 0 0 49.631 34.406 58.714 37 0 0 46 37 56 1 0 0 1 1 1 4642.3 19098 3000 18386 44117 51095 51095 1046 1 TGFSTSPESPYTHWK Unmodified 1723.7842 0.78420015 244 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7;A0A140LJ70;A0A140LJ68 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 0 8 0 1 56.509 56.509 3 0.03588 16952 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.667 17.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19099 244 18387 44118 51096 51096 1 TGGAVDR Unmodified 674.33475 0.33475237 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 0 4 0 1 21.397 21.397 2 0.03385 3385 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.206 40.977 49.358 0 0 47.525 146.39 59.783 46 0 0 46 144 60 1 0 0 1 1 1 9251.6 19100 2963 18388 44119 51097 51097 1 TGGLEIDSDFGGFR Unmodified 1469.6787 0.67867245 590 B1AU25;Q9Z0X1 Aifm1 Apoptosis-inducing factor 1, mitochondrial yes no 0 0 0 0 5 0 1 71.168 71.168 3 0.0016267 25928 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.546 42.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19101 590 18389 44120 51098 51098 1 TGHSLLHTLYGR Unmodified 1353.7153 0.71533272 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 10 0 1 44.709 44.709 4 0.00050817 9700 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.918 47.976 0 67.623 91.921 104.33 89.168 96.594 0 65 93 102 93 93 0 1 1 1 1 1 8917.8 19102 2597 18390 44121 51099 51099 1 TGISEGHTVYIVHDGFEGLAK Unmodified 2229.1066 0.10659692 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 6 0 1 61.095 61.095 4 0.0028386 20694 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.756 22.618 0 0 89.806 0 94.332 85.786 0 0 83 0 93 83 0 0 1 0 1 1 10748 19103 1357 18391 44122 51100 51100 1 TGIVLANGK Deamidation (N) 872.49673 0.49673232 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 1 0 0 8.5 2.69 1 1 1 1 54.366 54.366 2 0.0085464 17545 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.476 46.489 457.6 557.28 524.28 520.23 490.61 612.81 431 561 539 513 512 588 2 3 3 3 3 3 38245 19104 510 18392 44123;44124;44125;44126 51101;51102;51103;51104 51101 138 4 TGKPFNPLLGETYELVR Unmodified 1933.0309 0.030912783 2021 Q3V156;Q91XL9;D3Z7I9 Osbpl1a Oxysterol-binding protein;Oxysterol-binding protein-related protein 1 yes no 0 0 0 1 9 0 1 72.506 72.506 3 0.00059426 23824 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.745 39.511 68.984 53.554 82.474 84.655 61.086 87.801 65 56 83 83 65 84 1 1 1 1 1 1 11656 19105 2021 18393 44127 51105 51105 1 TGKPIAIK Unmodified 826.52764 0.52763852 2566 Q8JZN2;Q91W50 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 1 10 0 1 45.731 45.731 3 0.055713 10043 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.908 24.537 308.2 230.56 304.03 310.71 357.59 350.1 290 241 308 307 367 338 1 1 1 1 1 1 15521 19106 2566 18394 44128 51106 51106 1 TGKPLSVELGPGIMGAIFDGIQR Unmodified 2355.2621 0.26205171 1596 P50516;D3Z1B9;D3YWH3 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 1 9 0 1 89.555 89.555 3 0.049813 31581 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 29.447 15.716 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19107 1596 18395 44129 51107 51107 1 TGLEDPER Unmodified 915.42977 0.42977497 1974 Q3UH59;Q61879;Q5SV64;Q8BXF2 Myh10 Myosin-10 yes no 0 0 0 0 2.5 0.5 1 1 36.882 36.882 2 0.011506 10560 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.162 51.935 89.742 44.908 27.539 158.84 126.37 67.279 84 46 28 149 130 65 2 1 1 2 2 1 31535 19108 1974 18396 44130;44131 51108;51109 51109 2 TGLFCSLIK Unmodified 1037.558 0.55795237 2200 Q6NS52 Dgkb Diacylglycerol kinase beta yes yes 0 0 0 0 11.5 0.5 1 1 74.54 74.54 2;3 0.0012636 19584 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.239 39.252 29.754 57.578 0 0 66.371 47.142 28 56 0 0 65 46 1 1 0 0 1 1 2602 19109 2200 18397 44132;44133 51110;51111 51111 2 TGLFEHK Unmodified 830.42865 0.42865276 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 8 0 1 45.312 45.312 3 0.0079091 11696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.116 52.514 0 67.273 112.88 71.556 138.18 114.38 0 65 111 74 139 111 0 1 1 1 1 1 6344.2 19110 3449;3451 18398 44134 51112 51112 1 TGLFTPDLAFEATVK Unmodified 1608.8399 0.83992412 118 A0A0J9YUN4;A0A0J9YUE9 yes no 0 0 0 0 8.62 2.06 1 2 1 2 1 1 83.981 83.981 2;3 2.3899E-11 29026 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.001 70.863 584.5 196.43 272.63 540.02 515.87 368.51 547 204 261 509 529 352 7 4 5 5 6 3 176970 19111 118 18399 44135;44136;44137;44138;44139;44140;44141;44142 51113;51114;51115;51116;51117;51118;51119;51120;51121;51122;51123 51120 11 TGLFTPDLAFEATVKK Unmodified 1736.9349 0.93488713 118 A0A0J9YUN4;A0A0J9YUE9 yes no 0 0 0 1 8 0 1 76.421 76.421 4 0.024921 26432 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.954 16.122 59.852 0 39.732 0 0 29.848 56 0 37 0 0 28 1 0 1 0 0 1 1450.3 19112 118 18400 44143 51124 51124 1 TGLFTPDMAFEAIVK Unmodified 1638.8327 0.83273025 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;G3UXX2 Dnm3;Dnm2 Dynamin-3 no no 0 0 0 0 10 2.16 1 1 1 91.374 91.374 3 0.0005914 33126 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.409 41.831 69.745 20.216 0 90.719 0 0 65 19 0 83 0 0 1 1 0 2 0 0 35375 19113 960;1082 18401 44144;44145;44146 51125;51126;51127 51125 3 TGLFTPDMAFETIVK Unmodified 1668.8433 0.84329493 1534 P39053 Dnm1 Dynamin-1 yes yes 0 0 0 0 8.33 0.471 2 1 89.164 89.164 3;4 3.3026E-05 31491 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.898 49.478 30.044 14 0 0 29.288 0 28 14 0 0 28 0 1 1 0 0 1 0 9254.8 19114 1534 18402 44147;44148;44149 51128;51129;51130 51130 3 TGLIPENYVEFL Unmodified 1393.7129 0.71293269 946 E9QAQ3;Q6ZQ82;Q3U860;F6XTB7 Arhgap26 Rho GTPase-activating protein 26 yes no 0 0 0 0 5.5 0.5 1 1 98.718 98.718 2 0.0010657 35838 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.721 54.45 2.146 0 0 0 4.184 0 2 0 0 0 4 0 1 0 0 0 1 0 387.01 19115 946 18403 44150;44151 51131;51132 51131 2 TGLLTETSSR Unmodified 1063.551 0.55095274 761 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;F6RCU2 Clip1 CAP-Gly domain-containing linker protein 1 yes no 0 0 0 0 6 0 1 45.879 45.879 2 0.011913 13455 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.734 36.209 34.052 0 47.682 43.064 0 34.112 32 0 46 42 0 32 1 0 1 1 0 1 3123.8 19116 761 18404 44152 51133 51133 1 TGLPLSTYFSAVK Unmodified 1382.7446 0.74456717 583 B1ASZ3;Q64516;Q9WU65 Gyk;Gk;Gk2 Glycerol kinase;Glycerol kinase 2 yes no 0 0 0 0 10.5 0.5 1 1 79.21 79.21 2 7.1819E-11 24171 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.61 0 20.195 38.006 47.659 77.517 27.906 39.442 19 37 46 74 28 37 1 1 1 2 1 1 9591.5 19117 583 18405 44153;44154 51134;51135 51135 2 TGLTTLAQAVQAGYEVTVLVR Unmodified 2189.2056 0.20558268 864 E9PZC3;Q923D2;A0A0U1RPU7 Blvrb Flavin reductase (NADPH) yes no 0 0 0 0 11 0 1 97.559 97.559 3 2.7632E-11 32020 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.406 65.328 0 0 19.246 29.457 0 20.254 0 0 19 28 0 19 0 0 1 1 0 1 2287 19118 864 18406 44155 51136 51136 1 TGLVEFAR Unmodified 891.48142 0.48141661 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 7 0 1 55.233 55.233 2 0.016077 16921 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.452 29.769 99.154 0 106.64 72.283 119.28 85.074 93 0 102 74 120 83 1 0 1 1 1 1 7531.8 19119 2977 18407 44156 51137 51137 1 TGMGGATGNK Unmodified 892.40727 0.40726539 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 7 0 1 35.303 35.303 2 0.03994 7643 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.416 28.34 39.29 26.361 46.783 27.136 36.136 38.411 37 28 46 28 37 37 1 1 1 1 1 1 1853.8 19120 927 18408 44157 51138 51138 1 TGPAATTLSDTAAAESLVDSSEVTVIGFFK Unmodified 2984.4866 0.48662773 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 9.5 3.5 1 1 103.35 103.35 4 3.57E-34 37647 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.26 97.298 19.219 25.188 6.9327 5.9532 19.601 0 18 25 7 6 19 0 1 2 1 1 2 0 3596.6 19121 1331 18409 44158;44159 51139;51140 51139 2 TGPAGGFQAAPHTAAPYSQAAPAR Unmodified 2294.1192 0.11922729 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 6.5 0.5 1 1 46.044 46.044 3;4 1.5368E-22 12704 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.4 98.363 59.466 43.807 67.402 9 0 0 56 46 65 9 0 0 1 1 1 1 0 0 10446 19122 1561 18410 44160;44161 51141;51142 51142 2 TGPFAEHSNQLWNISAVPSWSK Unmodified 2455.1921 0.19205789 1654 P58389;A2AWE9;B7ZDE0;A2AWF0;F6Z6I0 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 9.5 0.5 2 2 76.299 76.299 3;4 4.987E-15 25559 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.03 81.302 187.93 97.145 72.671 95.966 158.71 57.645 176 102 74 93 157 56 3 2 2 2 2 1 17768 19123 1654 18411 44162;44163;44164;44165 51143;51144;51145;51146 51144 4 TGPNLHGLFGR Unmodified 1167.6149 0.6148904 1753 P62897;CON__P62894 Cycs Cytochrome c, somatic yes no 0 0 0 0 7.8 3.54 1 1 1 1 1 53.745 53.745 3 6.5206E-14 14971 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.21 120.44 1541.6 1329.8 1609.2 1627.4 1514.8 1915.1 1450 1363 1629 1598 1556 1829 6 5 6 6 6 6 396890 19124 1753 18412 44166;44167;44168;44169;44170 51147;51148;51149;51150;51151;51152;51153;51154 51151 8 TGPPTTQQPR Unmodified 1081.5516 0.55162144 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 7 3.16 1 1 1 1 1 29.077 29.077 2 1.8343E-08 6126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 147.2 108.41 222.75 182.66 157.04 152.43 73.82 358.49 209 184 158 148 75 340 5 4 4 4 2 8 139660 19125 1282 18413 44171;44172;44173;44174;44175 51155;51156;51157;51158;51159;51160;51161;51162;51163 51158 9 TGPYLFGAGCFSIK Unmodified 1516.7384 0.73843593 578 B1AR74;Q8CCN5;F7CPM1 Bcas3 Breast carcinoma-amplified sequence 3 homolog yes no 0 0 0 0 11 0 1 79.321 79.321 3 0.00011201 24313 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.972 41.835 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19126 578 18414 44176 51164 51164 1 TGQAAELGGLLK Unmodified 1156.6452 0.64518747 2369 Q8BG32;G3UYI4;G3UYL3;G3UYL8;G3UX15 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 7 0.816 1 1 1 65.158 65.158 3 0.0022453 20979 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.841 23.343 129.24 0 100.17 0 123.28 136.13 121 0 93 0 121 131 3 0 2 0 2 3 10644 19127 2369 18415 44177;44178;44179 51165;51166;51167 51167 3 TGQAAGFSYTDANK Unmodified 1429.6474 0.64737232 1753 P62897 Cycs Cytochrome c, somatic yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 49.864 49.864 2;3 1.0669E-11 15985 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.93 93.603 569.28 470.22 223.14 127.01 485.54 690.77 534 479 222 120 482 661 5 4 3 2 3 5 85901 19128 1753 18416 44180;44181;44182;44183;44184 51168;51169;51170;51171;51172 51168 5 TGQATVASGIPAGWMGLDCGTESSK Unmodified 2480.1312 0.13117347 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 10 3 1 1 74.308 74.308 3 2.0147E-23 28035 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.95 86.85 14.846 0 79.417 12.926 32.397 43.848 14 0 74 14 32 42 1 0 2 1 1 2 12090 19129 1334 18417 44185;44186 51173;51174 51174 2 TGQATVASGIPAGWMGLDCGTESSKK Unmodified 2608.2261 0.22613648 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 1 10 3 1 1 67.846 67.846 4 2.4475E-23 24810 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.967 75.758 118.35 88.285 231.06 72.912 179.27 173.74 111 93 222 74 177 166 2 3 4 2 3 3 19568 19130 1334 18418 44187;44188 51175;51176;51177;51178 51177 4 TGQEIPVNLR Unmodified 1125.6142 0.6142217 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 5.5 0.5 1 1 51.347 51.347 2 0.00026242 16007 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.456 66.659 98.435 93.764 148.14 131.94 70.294 205.86 93 93 148 130 74 195 2 1 2 2 1 2 12473 19131 3038 18419 44189;44190 51179;51180 51180 2 TGSDLGIPK Unmodified 886.476 0.47599688 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 6.5 0.5 1 1 53.278 53.278 2 0.0036905 16862 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.923 33.23 59.937 30.006 0 64.581 53.135 72.038 56 32 0 60 56 69 1 1 0 1 1 1 5917.7 19132 3192 18420 44191;44192 51181;51182 51181 2 TGSEAPQDLLEK Unmodified 1286.6354 0.63541065 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 4 0 1 58.802 58.802 2 0.049238 20549 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.894 19.725 0 0 19.701 19.236 18.99 0 0 0 19 19 19 0 0 0 1 1 1 0 2288.3 19133 145 18421 44193 51183 51183 1 TGSESSQTGASATSGR Unmodified 1482.6546 0.65464254 2377 Q8BGD9 Eif4b Eukaryotic translation initiation factor 4B yes yes 0 0 0 0 6 4.97 1 1 1 24.099 24.099 2;3 2.0459E-50 4647 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 180.95 142.19 0 0 14.505 14.438 23.056 48.19 0 0 14 14 23 47 0 0 1 1 1 2 5773.5 19134 2377 18422 44194;44195;44196 51184;51185;51186 51185 3 TGSESSVDR Unmodified 936.41485 0.41485319 3265 Q9QXK3 Copg2 Coatomer subunit gamma-2 yes yes 0 0 0 0 2 0.816 1 1 1 23.182 23.182 2 0.0014762 3883 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.64 32.22 29.826 24.325 45.407 49.494 28.702 74.867 28 23 43 46 29 71 1 2 2 2 2 3 8512.9 19135 3265 18423 44197;44198;44199 51187;51188;51189 51187 3 TGSLFHHPA Unmodified 965.47191 0.47191456 212 A0A0R4J1T9;Q9WU79 Prodh Proline dehydrogenase 1, mitochondrial yes no 0 0 0 0 7 0 1 37.666 37.666 3 0.023887 8802 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.607 39.734 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19136 212 18424 44200 51190 51190 1 TGSNISGASSDVSLDEQYK Unmodified 1956.8912 0.891244 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 0 0 0 4 0 1 55.883 55.883 3 4.9141E-05 19065 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.058 37.178 0 19.892 19.365 0 28.291 29.041 0 19 19 0 28 28 0 1 1 0 1 1 2464.2 19137 1910 18425 44201 51191 51191 1 TGSPLTVATGNDQAATEAK Unmodified 1830.8959 0.89593544 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 0 5 0 1 53.971 53.971 3 0.026883 17908 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 32.565 15.076 20.126 18.387 28.241 19.084 0 0 19 19 28 19 0 0 1 1 1 1 0 0 2673.3 19138 2691 18426 44202 51192 51192 1 TGSQGQCTQVR Unmodified 1220.5568 0.55678317 1071 G3UYV7;P62858 Rps28 40S ribosomal protein S28 yes no 0 0 0 0 5 0.816 1 1 1 24.414 24.414 2;3 2.5187E-05 4077 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.21 68.827 34.387 0 0 15.302 0 0 33 0 0 14 0 0 2 0 0 1 0 0 5516.4 19139 1071 18427 44203;44204;44205 51193;51194;51195 51194 3 TGSSPFLPFSWFTDSGK Unmodified 1859.873 0.87301516 2576 Q8K070 Samd14 Sterile alpha motif domain-containing protein 14 yes yes 0 0 0 0 12 0 1 95.31 95.31 3 0.0030942 27336 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.913 37.009 0 0 0 15.302 0 9.594 0 0 0 14 0 9 0 0 0 1 0 1 508.53 19140 2576 18428 44206 51196 51196 1 TGTAEMSSILEER Unmodified 1422.6661 0.66605885 1881 Q03265;D6RJ16 Atp5a1 ATP synthase subunit alpha, mitochondrial yes no 0 0 0 0 5.83 3.34 1 2 1 1 1 59.778 59.778 2;3 6.8928E-73 20720 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 218.75 168.56 455.9 339.21 337.69 146.62 341.46 467.59 428 353 334 148 344 447 6 7 5 2 5 6 292520 19141 1881 18429 44207;44208;44209;44210;44211;44212 51197;51198;51199;51200;51201;51202;51203 51203 7 TGTCGYCGLQFK Unmodified 1390.601 0.60095617 1610 P52503;A0A1Y7VM38 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes no 0 0 0 0 9 0 1 58.645 58.645 2 0.00011164 17287 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.111 66.992 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2876.5 19142 1610 18430 44213 51204 51204 1 TGTEVGDVAK Unmodified 975.48729 0.48728985 3338 Q9WUR9;A2ARF6 Ak4 Adenylate kinase 4, mitochondrial yes no 0 0 0 0 7.33 4.03 1 1 1 43.536 43.536 2 0.0012886 13284 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.584 50.555 177.57 221.86 205.64 238.36 157.21 85.59 167 223 213 232 158 83 2 3 3 3 2 1 19430 19143 3338 18431 44214;44215;44216 51205;51206;51207 51205 3 TGTITTFEHAHNMR Unmodified 1614.7573 0.75727389 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 6 0 1 41.267 41.267 4 0.036364 11298 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.037 19.147 0 48.944 0 50.278 0 69.29 0 46 0 46 0 65 0 1 0 1 0 1 3636.2 19144 1652 18432 44217 51208 51208 1 TGTLTQNR Unmodified 889.46174 0.4617438 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp4a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 8.5 2.99 1 1 1 1 1 1 29.964 29.964 2 0.0010466 5373 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.27 88.455 1135.1 716.52 635.29 436.24 641.22 1262.5 1064 748 628 439 654 1200 6 6 6 6 7 7 624970 19145 106;2253;2699 18433 44218;44219;44220;44221;44222;44223 51209;51210;51211;51212;51213;51214;51215;51216 51212 8 TGTLTTNR Unmodified 862.45084 0.45084476 1042;487 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55 Atp2b2;Atp2b3 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 8.67 3.09 1 1 1 30.645 30.645 2 0.0027504 6355 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.62 35.553 207.96 160.8 171.32 134.4 83.627 0 195 167 167 130 83 0 2 3 2 2 1 0 45138 19146 1042;487 18434 44224;44225;44226 51217;51218;51219 51217 3 TGTSYFFGGCPK Unmodified 1320.5809 0.58087266 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9 0 1 61.992 61.992 2 8.8802E-07 18847 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.428 53.41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19147 1226 18435 44227 51220 51220 1 TGTVALEVR Unmodified 944.5291 0.52909508 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 5 0 1 47.033 47.033 2 0.021128 14592 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.04 36.903 0 0 80.068 0 56.251 67.685 0 0 74 0 56 65 0 0 1 0 1 1 4607.2 19148 1412 18436 44228 51221 51221 1 TGTVQVLK Unmodified 844.50182 0.5018177 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 8 0 1 49.763 49.763 2 0.04977 13779 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.582 20.355 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19149 581 18437 44229 51222 51222 1 TGVAPIIDVVR Unmodified 1138.671 0.67100829 1371 P14115 Rpl27a 60S ribosomal protein L27a yes yes 0 0 0 0 6 0 1 65.817 65.817 2 0.0024309 22760 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.102 57.954 0 58.345 74.1 55.384 74.86 0 0 56 74 56 74 0 0 1 1 1 1 0 4510.8 19150 1371 18438 44230 51223 51223 1 TGVHHYSGNNIELGTACGK Unmodified 2013.9327 0.93267208 382 A0A2I3BQF4;P62889 Rpl30 60S ribosomal protein L30 yes no 0 0 0 0 6 0 1 42.387 42.387 4 0.0065655 11785 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.203 19.364 0 29.337 27.245 28.98 0 0 0 28 28 28 0 0 0 1 1 1 0 0 1213.3 19151 382 18439 44231 51224 51224 1 TGVIQTSTEQSFSK Unmodified 1511.7468 0.74675201 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 10.3 2.49 1 1 1 54.422 54.422 2;3 0.00010939 18328 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.725 63.756 188.41 105.83 38.035 191.19 0 178.02 176 112 37 177 0 167 1 2 1 2 0 2 22084 19152 1424 18440 44232;44233;44234 51225;51226;51227 51227 3 TGVLAAVLTSQPSIPR Unmodified 1608.9199 0.91990577 755 D3Z2E3;F6R6F1;E9Q632;O54916 Reps1 RalBP1-associated Eps domain-containing protein 1 yes no 0 0 0 0 8 4.97 1 1 1 77.691 77.691 2;3 3.9077E-12 20900 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.719 63.376 50.191 27.498 17.002 69.348 36.338 68.253 47 28 19 65 37 65 2 1 1 2 1 2 11186 19153 755 18441 44235;44236;44237 51228;51229;51230 51230 3 TGVLQSLLGR Unmodified 1042.6135 0.61349341 2372 Q8BG51;F7ASU3 Rhot1 Mitochondrial Rho GTPase 1 yes no 0 0 0 0 12 0 1 72.006 72.006 2 0.0041467 18553 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.932 24.495 142.79 67.28 109.31 135.58 0 123.66 134 74 111 130 0 116 1 1 1 1 0 1 10563 19154 2372 18442 44238 51231 51231 1 TGVTGPYVLGTGLSLYFLSK Unmodified 2072.1194 0.11939344 2937 Q9CQQ7 Atp5f1 ATP synthase F(0) complex subunit B1, mitochondrial yes yes 0 0 0 0 12 0 1 96.832 96.832 3 1.4146E-08 27735 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.334 56.97 16.057 0 6.411 0 7.146 5.1261 15 0 6 0 7 5 1 0 1 0 1 1 1130.9 19155 2937 18443 44239 51232;51233 51233 2 TGVYEEK Unmodified 824.3916 0.39159855 1523 P35564 Canx Calnexin yes yes 0 0 0 0 9.5 3.5 1 1 40.488 40.488 2 0.02695 11040 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.298 29.148 0 126.32 81.201 137.25 0 148.17 0 120 83 130 0 139 0 2 1 2 0 2 11517 19156 1523 18444 44240;44241 51234;51235 51234 2 TGWFPSNYVR Unmodified 1225.588 0.58800695 3191;192 A0A0R4J0X8;A0A1B0GRS3;H3BJ53;F6WMJ3;Q8K4I3;Q9ES28;D3Z0V2 Arhgef6;Arhgef7 Rho guanine nucleotide exchange factor 6;Rho guanine nucleotide exchange factor 7 no no 0 0 0 0 9.5 0.5 1 1 65.099 65.099 2 0.0022146 18157 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.882 60.092 108.79 36.703 79.719 50.278 0 0 102 37 74 46 0 0 2 1 1 1 0 0 17357 19157 192;3191 18445 44242;44243 51236;51237 51237 2 TGYESGDYEMLGEGLGVK Unmodified 1903.851 0.85095909 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 4.5 0.5 1 1 72.967 72.967 3 0.00038724 26751 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.805 44.64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19158 2844 18446 44244;44245 51238;51239 51238 2 TGYTLDVTTGQR Unmodified 1310.6466 0.64664404 2719;218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UXJ6;G3UZ48;G3UWM1;G3UXU5;S4R1E9;Q8VHM5;A2AW41;F7B5B5 Syncrip;Hnrnpr Heterogeneous nuclear ribonucleoprotein Q no no 0 0 0 0 13 0 1 49.811 49.811 3 0.0001454 16330 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.676 56.822 38.939 35.099 98.324 0 114.53 45.768 37 37 93 0 111 46 1 1 1 0 1 1 6282.3 19159 218;2719 18447 44246 51240 51240 1 THAVLVALK Unmodified 950.5913 0.59130141 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 0 10 0 1 51.276 51.276 3 0.00024679 12150 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.2 80.644 0 154.4 183.97 155.76 317.58 168.96 0 148 185 158 316 167 0 1 1 1 1 1 26240 19160 3313 18448 44247 51241 51241 1 THAVLVALKR Unmodified 1106.6924 0.69241244 3313 Q9R1P4;A0A1B0GS70 Psma1 Proteasome subunit alpha type-1 yes no 0 0 0 1 12 0 1 45.128 45.128 4 0.0024385 8593 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 61.78 31.209 218.32 114.02 0 150.38 82.22 59.696 204 121 0 139 83 56 2 2 0 2 1 1 18942 19161 3313 18449 44248 51242;51243 51243 2 THCGNVLQPYLK Unmodified 1428.7184 0.71836919 2582 Q8K0S0 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes yes 0 0 0 0 8.5 0.5 1 1 52.235 52.235 3 2.2097E-06 14099 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.43 59.245 147.55 251.57 268.04 112.64 249.5 351.06 139 250 267 111 255 336 1 2 2 1 2 2 46829 19162 2582 18450 44249;44250 51244;51245 51245 2 THCPIYLVNVSSISAGDVIAAAK Unmodified 2385.2362 0.23623089 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 10 0 1 76.915 76.915 4 0.040344 23582 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 27.961 12.369 0 49.416 35.416 37.108 64.995 37.587 0 47 37 37 65 37 0 1 1 1 1 1 2847.4 19163 3172 18451 44251 51246 51246 1 THDVGGYYYEK Unmodified 1330.583 0.58298115 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 5.5 0.5 1 1 44.777 44.777 3 2.093E-09 12855 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 132.32 114.96 187.15 60.947 233.42 73.418 89.93 194.64 176 65 223 74 93 185 2 1 2 1 1 2 28788 19164 1382 18452 44252;44253 51247;51248 51248 2 THEDILENLDAR Unmodified 1424.6896 0.68957148 2826 Q99J99 Mpst 3-mercaptopyruvate sulfurtransferase yes yes 0 0 0 0 3.5 0.5 1 1 52.713 52.713 3 0.00018164 17914 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.705 53.488 20.244 88.011 0 90.719 0 29.848 19 84 0 83 0 28 1 2 0 2 0 1 12315 19165 2826 18453 44254;44255 51249;51250 51249 2 THEEHHAAK Acetyl (Protein N-term) 1100.4999 0.49992022 1568 P47857;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 1 0 0 0 2 0.816 1 1 1 16.278 16.278 3 3.3318E-05 2705 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.435 43.605 152.17 149.76 102.1 147.69 134.08 150.74 143 152 103 143 137 145 5 6 3 5 3 4 14191 19166 1568 18454 44256;44257;44258 51251;51252;51253;51254;51255;51256 51252 6 THFFLNAGNLCNLNYGEGPK Unmodified 2265.0637 0.063686249 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 9 0 1 69.652 69.652 3 6.393E-05 22493 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.536 46.253 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19167 2379 18455 44259 51257 51257 1 THFGGGK Unmodified 702.34492 0.34492313 370 A0A286YEB7;P62849 Rps24 40S ribosomal protein S24 yes no 0 0 0 0 8 0 1 31.001 31.001 3 0.015972 5485 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.915 45.896 98.503 79.178 149.06 130.84 125.7 124.33 93 83 148 130 130 120 1 1 1 1 1 1 9779.7 19168 370 18456 44260 51258 51258 1 THFLPLMEK Unmodified 1114.5845 0.58450147 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 9 0 1 61.601 61.601 3 0.013304 18700 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.278 33.548 0 0 87.83 44.354 36.665 0 0 0 83 46 37 0 0 0 1 1 1 0 1884.9 19169 902 18457 44261 51259 51259 1 THGVVIQPAYK Unmodified 1211.6663 0.66625727 1222 Q80VX2;O54901;E9QMY1;E9PZI9;Q05D16 Cd200 OX-2 membrane glycoprotein yes no 0 0 0 0 7 0 1 45.287 45.287 3 0.05879 12390 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.252 10.593 48.941 0 70.083 0 0 69.29 46 0 65 0 0 65 1 0 1 0 0 1 4797.8 19170 1222 18458 44262 51260 51260 1 THHNDTELIR Unmodified 1234.6054 0.60544792 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 3 0 1 28.975 28.975 4 0.032172 6917 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.704 23.645 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 1301.6 19171 1925 18459 44263 51261 51261 1 THIDTVINALK Unmodified 1223.6874 0.68738664 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 11 2 1 1 62.04 62.04 3 2.7951E-08 18825 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.39 70.386 0 126.07 96.288 146.19 0 0 0 120 102 139 0 0 0 1 1 1 0 0 29862 19172 1400 18460 44264;44265 51262;51263 51262 2 THIETVINALK Unmodified 1237.703 0.7030367 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 9 0.707 1 2 1 62.529 62.529 2;3;4 1.3173E-09 19064 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.57 66.934 20.27 58.832 64.581 127.19 64.33 0 19 56 65 121 65 0 1 1 2 3 1 0 16489 19173 1401 18461 44266;44267;44268;44269 51264;51265;51266;51267 51266 4 THILLFLPK Unmodified 1080.6696 0.66955173 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 6.5 5.5 1 1 69.989 69.989 3 0.00035001 23925 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 98.033 73.18 127.97 75.342 68.712 109.23 76.617 50.048 120 80 68 105 77 49 2 2 1 2 1 1 38415 19174 1331 18462 44270;44271 51268;51269 51268 2 THINIVVIGHVDSGK Unmodified 1587.8733 0.87328993 1729;1341 P10126;D3Z3I8;D3YZ68;P62631 Eef1a1;Eef1a2 Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 no no 0 0 0 0 9 0 1 52.771 52.771 3 0.0015372 14461 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.76 36.884 29.782 17.722 29.083 0 47.137 28.503 28 19 28 0 46 28 1 1 1 0 1 1 3120.6 19175 1341;1729 18463 44272 51270 51270 1 THINTVVAK Unmodified 981.56073 0.56072956 2583;2279 Q7M6W1;A3QM89;Q8K0T0 Rtn1 Reticulon;Reticulon-1 no no 0 0 0 0 8.75 1.48 1 1 1 1 39.81 39.81 2;3 0.00024644 9867 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.22 66.494 358.56 209.87 369.76 450.45 393.39 372.3 337 216 369 438 399 356 2 2 3 3 2 2 121950 19176 2279;2583 18464 44273;44274;44275;44276 51271;51272;51273;51274 51271 4 THKNPALK Unmodified 907.52395 0.52395013 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 1 11 2 1 1 32.596 32.596 4 0.011428 6044 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.735 21.132 411.71 632.18 875.37 0 784.91 858.12 389 634 846 0 775 826 2 3 3 0 2 3 36626 19177 1536 18465 44277;44278 51275;51276;51277 51275 3 THLGETLTPLSK Unmodified 1295.7085 0.70851601 1898 Q0VGU4 Vgf yes yes 0 0 0 0 7 0 1 53.771 53.771 3 0.0096281 16273 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.915 20.8 0 77.501 73.866 34.846 63.413 86.668 0 74 74 37 65 83 0 1 1 1 1 1 3178.2 19178 1898 18466 44279 51278 51278 1 THLPGFVEQAGALK Unmodified 1466.7882 0.78816332 1867 P99029;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 8.88 1.83 2 2 2 1 1 60.694 60.694 2;3;4 7.3504E-22 19078 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.97 104.79 666.81 566.89 487.5 552.93 688.74 843.25 626 574 482 533 694 808 9 9 6 6 8 8 243870 19179 1867 18467 44280;44281;44282;44283;44284;44285;44286;44287 51279;51280;51281;51282;51283;51284;51285;51286;51287;51288 51284 10 THLQDLK Unmodified 853.46577 0.46576654 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 7.5 0.5 1 1 41.515 41.515 3 0.011595 10733 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.127 39.32 246.24 168.81 309.65 302.78 121.71 221.73 232 176 306 296 120 208 3 2 2 3 1 1 51414 19180 402;3384 18468 44288;44289 51289;51290;51291 51290 3 THMQNIK Deamidation (N) 871.42219 0.42218717 431 A2A6U3;Q80UG5 Sept9 Septin-9 yes no 0 1 0 0 7 0 1 37.752 37.752 3 0.022129 8874 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.297 6.1875 148.13 0 170.21 0 201.89 152.01 139 0 158 0 198 148 1 0 1 0 1 1 13890 19181 431 18469 44290 51292 51292 114 1 THNLEPYFESFINNLR Unmodified 1992.9694 0.96937516 657 CON__P04264 yes yes 0 0 0 0 8.5 0.5 1 1 81.306 81.306 3 9.597E-06 27992 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.29 76.003 0 44.311 22.575 89.967 26.577 103.71 0 42 23 84 28 98 0 2 1 3 1 3 31392 + 19182 657 18470 44291;44292 51293;51294;51295 51295 3 THNSALEYNIFEGMECR Unmodified 2069.8935 0.89350938 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 5.75 0.829 2 1 1 65.06 65.06 3;4 1.5322E-34 22299 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.39 137.96 492.81 407.44 325.49 357.92 394.97 476.77 463 416 336 346 406 456 5 4 3 2 4 4 86918 19183 1158 18471 44293;44294;44295;44296 51296;51297;51298;51299;51300 51299 5 THNSALEYNIFEGMECR Deamidation (N) 2070.8775 0.87752496 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 1 0 0 5 0 1 70.854 70.854 3 6.2075E-06 25791 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.526 58.77 0 19.431 46.929 37.644 0 0 0 19 46 37 0 0 0 1 1 1 0 0 5749.9 19184 1158 18471 44297 51301 51301 314 1 THNSALEYNIFEGMECR Oxidation (M) 2085.8884 0.888424 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 1 0 5 0 1 56.31 56.31 3 0.056791 18996 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.12 35.031 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19185 1158 18471 44298 51302 51302 1 THPAVSPSSK Unmodified 1009.5193 0.51925868 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 7.5 0.5 1 1 30.388 30.388 3 0.0013857 5634 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.066 47.637 0 38.609 45.373 74.747 43.962 58.442 0 37 46 74 46 56 0 1 1 2 1 1 5419.1 19186 3449;3451 18472 44299;44300 51303;51304 51303 2 THPLLLR Unmodified 848.52322 0.52322184 1041 F8WGX5;Q6PNC0 Dmxl1 DmX-like protein 1 yes no 0 0 0 0 10.7 1.7 1 1 1 38.264 38.264 3 0.0095859 8119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.847 0 99.029 150.79 0 0 0 108.73 93 148 0 0 0 102 1 1 0 0 0 1 17042 19187 1041 18473 44301;44302;44303 51305;51306;51307 51305 3 THPSVVPGCIAFSLPQR Unmodified 1864.9618 0.96178736 1554 P46460;G3UX86;G3UX98 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 9.25 1.09 1 2 1 62.274 62.274 3;4 3.4947E-06 18998 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.252 75.527 49.128 75.423 60.592 30.604 82.835 214.03 46 74 56 28 83 203 1 2 1 1 2 4 35527 19188 1554 18474 44304;44305;44306;44307 51308;51309;51310;51311 51309 4 THQALEEEK Unmodified 1083.5197 0.51965261 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 13 0 1 32.428 32.428 3 0.0090062 7769 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.699 26.637 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19189 1036 18475 44308 51312 51312 1 THQDQPQK Unmodified 980.46756 0.46755746 916 E9Q683;Q6PHS9 Cacna2d2 Voltage-dependent calcium channel subunit alpha-2/delta-2;Voltage-dependent calcium channel subunit alpha-2-2;Voltage-dependent calcium channel subunit delta-2 yes no 0 0 0 0 5 0 1 24.492 24.492 3 0.0396 4102 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.813 20.004 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19190 916 18476 44309 51313 51313 1 THQEVTSSR Unmodified 1043.4996 0.49958587 2492 Q8C2E7 Kiaa0196 WASH complex subunit strumpellin yes yes 0 0 0 0 3 0 1 17.898 17.898 3 0.017982 2583 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.297 27.911 0 0 5.2831 2.8485 6.1451 0 0 0 5 3 6 0 0 0 1 1 1 0 393.69 19191 2492 18477 44310 51314 51314 1 THQSALQVQQK Unmodified 1266.668 0.66804818 545;1894 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560;Q0KL02;A0A2I3BRP6 Kalrn;Trio Kalirin;Triple functional domain protein no no 0 0 0 0 6.5 0.5 1 1 34.602 34.602 3 0.0010109 7310 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.663 51.691 29.904 27.776 0 60.356 45.317 58.403 28 28 0 56 46 56 1 1 0 2 1 2 4232.3 19192 545;1894 18478 44311;44312 51315;51316 51316 2 THSAITLGDWSDPLDPDAEAQAVYR Unmodified 2727.2776 0.27763801 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 0 5 0 1 75.16 75.16 3 0.038319 27803 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 23.246 15.058 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19193 3391 18479 44313 51317 51317 1 THSDQFLVSFK Unmodified 1307.651 0.65100113 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 8.17 0.687 1 3 2 59.692 59.692 2;3;4 2.4742E-08 19213 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.63 58.84 714.13 432.28 616.62 632.98 654.17 811.75 671 450 609 624 675 779 6 5 3 5 4 5 127220 19194 484;2493 18480 44314;44315;44316;44317;44318;44319 51318;51319;51320;51321;51322;51323 51318 6 THSIESSGK Unmodified 944.45632 0.45632407 1567 P47809;B1ATL6 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes no 0 0 0 0 5.5 0.5 1 1 29.164 29.164 3 0.003858 5519 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.347 33.975 146.34 148.86 164.66 142.82 194.65 202.32 138 149 167 143 199 195 3 2 3 3 3 3 8856.5 19195 1567 18481 44320;44321 51324;51325;51326 51326 3 THSMQQAK Unmodified 929.4389 0.43889987 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 13 0 1 26.348 26.348 3 0.05902 4845 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.429 23.204 0 38.901 27.962 0 0 39.442 0 37 28 0 0 37 0 1 1 0 0 1 2461.8 19196 2028 18482 44322 51327 51327 1 THSVETPYGSVTFTVYGTPKPK Unmodified 2395.206 0.20597662 377 A0A2I3BPW0;A0A2I3BPL1;A0A2I3BS20 yes no 0 0 0 1 9.5 0.5 1 1 62.632 62.632 4 2.4323E-27 17199 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.38 118.66 0 106.48 172.35 43.935 255.3 181.4 0 102 167 46 250 177 0 2 3 1 2 3 22477 19197 377 18483 44323;44324 51328;51329;51330 51330 3 THTHIVIPYR Unmodified 1235.6775 0.67749065 384 A0A2I3BQZ9;P12023;A0A2I3BPT1;Q3TWF3;A0A2I3BR03 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 0 7.5 0.5 1 1 38.841 38.841 4 0.0023357 9468 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.691 40.391 69.316 17.728 57.091 46.875 0 59.696 65 19 56 46 0 56 2 1 2 2 0 1 4978.1 19198 384 18484 44325;44326 51331;51332 51331 2 THTPSPTSPK Unmodified 1051.5298 0.52982336 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 6.33 1.25 1 1 1 31.34 31.34 3 0.0004156 6628 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.298 59.13 20.387 37.593 106.15 64.008 66.401 58.879 19 37 102 65 65 56 1 1 1 2 2 2 6203.8 19199 2996 18485 44327;44328;44329 51333;51334;51335 51334 3 THTQDAVPLTLGQEFSGYVQQVQYAMVR Unmodified 3165.5553 0.55533319 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 8 0 1 89.162 89.162 4 2.1808E-05 32257 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.099 33.368 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 2234 19200 1857 18486 44330 51336 51336 1 THYDPPR Unmodified 884.41407 0.41406533 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 0 7.33 4.03 1 1 1 25.832 25.832 3 0.0070259 4591 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 81.635 53.212 98.877 105.04 64.273 50.331 84.097 102.07 93 106 65 51 84 98 3 3 2 2 2 3 16796 19201 1209;1808 18487 44331;44332;44333 51337;51338;51339 51339 3 THYDPPRK Unmodified 1012.509 0.50902834 1209;1808 O35737;Q8C2Q7;P70333 Hnrnph1;Hnrnph2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 no no 0 0 0 1 6 0 1 29.901 29.901 4 0.019771 6041 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.166 32.607 107.9 108.02 167.87 130.08 106.83 96.09 102 111 167 130 111 93 1 1 1 1 1 1 15351 19202 1209;1808 18488 44334 51340 51340 1 TIAECLADELINAAK Unmodified 1630.8236 0.82362212 723 D3YYM6;D3Z1S8;Q91V55 Rps5 yes no 0 0 0 0 7 0.816 1 1 1 93.691 93.691 3 1.6745E-05 35441 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.52 81.857 30.044 19.744 28.261 19.083 29.288 0 28 19 28 19 28 0 1 1 1 1 1 0 10429 19203 723 18489 44335;44336;44337 51341;51342;51343 51341 3 TIAIIAEGIPEALTR Unmodified 1566.8981 0.8981077 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 8.75 2.49 2 1 1 84.597 84.597 2;3 3.4776E-08 30832 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.288 61.273 0 0 49.568 38.169 67.563 0 0 0 47 37 65 0 0 0 2 2 2 0 14044 19204 2020 18490 44338;44339;44340;44341 51344;51345;51346;51347 51345 4 TIAMDGTEGLVR Unmodified 1261.6336 0.63363651 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 6.83 2.91 1 1 2 1 1 58.481 58.481 2;3 9.4204E-49 20158 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 199.4 136.43 914.74 365.74 499.57 275.14 713.05 949.71 857 388 496 278 723 910 7 6 6 4 6 7 271830 19205 1642 18491 44342;44343;44344;44345;44346;44347 51348;51349;51350;51351;51352;51353;51354;51355 51355 8 TIAMDGTEGLVR Oxidation (M) 1277.6286 0.62855113 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 1 0 5 0 1 50.189 50.189 2 0.047466 16086 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.958 32.631 39.346 0 59.659 16.498 37.944 0 37 0 56 19 37 0 1 0 1 1 1 0 7135.4 19206 1642 18491 44348 51356 51356 113 1 TIAPALVSK Unmodified 898.54877 0.54876789 1398 P17182;B1ARR7 Eno1 Alpha-enolase yes no 0 0 0 0 9.8 3.25 1 1 1 1 3 2 1 56.638 56.638 2;3 9.1427E-05 13320 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.13 94.112 2921.5 2578.2 3619.1 3362.4 3984.9 3705 2753 2649 3619 3362 4054 3577 9 11 11 11 10 10 1508900 19207 1398 18492 44349;44350;44351;44352;44353;44354;44355;44356;44357;44358 51357;51358;51359;51360;51361;51362;51363;51364;51365;51366;51367;51368;51369;51370 51368 14 TIAPALVSKK Unmodified 1026.6437 0.64373091 1398 P17182;B1ARR7 Eno1 Alpha-enolase yes no 0 0 0 1 11.5 0.5 1 1 53.282 53.282 3 0.0065118 11355 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.466 46.837 48.74 55.344 117.05 85.689 141.87 170.78 46 56 115 83 145 164 1 1 2 1 2 2 19778 19208 1398 18493 44359;44360 51371;51372;51373 51372 3 TIAPCQK Unmodified 816.41637 0.41637351 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 40.138 40.138 2 0.027718 8900 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.602 49.428 167.61 104.84 53.79 127.03 107.24 154.71 157 107 51 121 111 148 2 1 1 2 1 2 16349 19209 1533 18494 44361;44362 51374;51375 51375 2 TIAQDYGVLK Unmodified 1106.5972 0.59717465 604 B1AXW5;B1AXW6;P35700;B1AXW4 Prdx1 Peroxiredoxin-1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 61.503 61.503 3 1.9112E-05 20861 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.52 50.118 355.67 259.21 478.63 427.88 505.89 327.9 334 259 476 419 507 315 3 2 4 3 3 3 104260 19210 604 18495 44363;44364;44365;44366 51376;51377;51378;51379 51376 4 TIAQVLVHLHR Unmodified 1285.7619 0.76188899 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 8 4.97 1 1 1 56.183 56.183 3;4 2.3462E-08 18053 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 112.13 67.816 127.94 73.82 74.46 59.676 183.66 206.89 120 75 69 56 185 199 3 2 1 1 3 3 63436 19211 775 18496 44367;44368;44369 51380;51381;51382 51380 3 TIATALEYVYK Unmodified 1270.6809 0.68090428 695 D3YVM8;O55102 Bloc1s1 Biogenesis of lysosome-related organelles complex 1 subunit 1 yes no 0 0 0 0 9 0 1 78.748 78.748 3 0.0045093 26732 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.426 27.944 0 0 0 29.902 37.328 0 0 0 0 28 37 0 0 0 0 1 1 0 2049 19212 695 18497 44370 51383 51383 1 TIATSQNR Unmodified 889.46174 0.4617438 1179 O35129;F6QPR1 Phb2 Prohibitin-2 yes no 0 0 0 0 8.5 2.69 1 1 1 1 27.543 27.543 2 0.0012864 4482 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.68 82.224 88.601 26.978 54.174 91.513 113.68 71.366 83 28 55 88 116 69 3 1 2 3 3 2 27221 19213 1179 18498 44371;44372;44373;44374 51384;51385;51386;51387 51385 4 TIAVLLPCLLDK Unmodified 1354.7894 0.78940887 492 A2ALV7;Q6PDI5 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 11.5 0.5 1 1 91.155 91.155 3 0.0019545 25960 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.951 36.57 0 12.5 16.038 11.766 20.933 14.327 0 12 16 12 21 14 0 1 1 1 1 1 4640.2 19214 492 18499 44375;44376 51388;51389 51389 2 TICAILENYQAEK Unmodified 1551.7603 0.76029359 1460 Q8C483;P26638 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 8.5 0.5 1 1 73.945 73.945 3 0.00021996 25104 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.92 39.377 119.75 84.289 0 248.2 0 198.28 112 83 0 231 0 186 2 1 0 3 0 2 12846 19215 1460 18500 44377;44378 51390;51391;51392 51390 3 TICLAFR Unmodified 879.46366 0.46365805 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 10.5 0.5 1 1 60.609 60.609 2 0.0024108 16413 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 152.26 99.076 434.3 341.53 476.95 518.43 271.65 589.21 409 356 476 505 288 560 1 1 1 2 1 2 80869 19216 1096 18501 44379;44380 51393;51394 51393 2 TICVAYR Unmodified 881.44292 0.44292261 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 10.5 2.5 1 1 45.851 45.851 2 0.031981 12076 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.699 37.897 207.68 198.28 285.36 274.59 128.69 75.212 195 204 287 269 130 74 1 2 2 2 1 1 27119 19217 1042 18502 44381;44382 51395;51396 51395 2 TIDDEPVEETEIPCEISELYDNPK Unmodified 2834.2692 0.26916632 2281 Q7M750 Opalin Opalin yes yes 0 0 0 0 3 0 1 83.653 83.653 4 0.0036461 31083 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 35.628 21.467 0 6.2275 9.3644 0 6.276 0 0 6 9 0 6 0 0 1 1 0 1 0 3165 19218 2281 18503 44383 51397 51397 1 TIDDLEDELYAQK Unmodified 1551.7304 0.73043325 926;209 P21107;A0A0R4J1P2;E9Q7Q3 Tpm3 Tropomyosin alpha-3 chain no no 0 0 0 0 4.5 0.5 1 1 76.83 76.83 3 2.8448E-05 28511 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.38 76.577 0 0 48.586 26.63 103.13 67.984 0 0 46 28 102 65 0 0 1 1 2 1 10308 19219 209;926 18504 44384;44385 51398;51399 51398 2 TIDDLEDK Unmodified 947.44476 0.44475633 757 D3Z2H9 Tpm3-rs7 no no 0 0 0 0 4 0 1 54.938 54.938 3 0.0058323 18606 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.485 36.605 0 0 0 0 46.477 47.71 0 0 0 0 46 46 0 0 0 0 1 1 3041.7 19220 757 18505 44386 51400 51400 1 TIDDLEDKLK Unmodified 1188.6238 0.62378333 757 D3Z2H9 Tpm3-rs7 no no 0 0 0 1 8 2.61 2 1 1 1 65.72 65.72 3;4 8.2724E-05 22751 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.93 45.199 1084.3 1114.4 947.67 898.72 1003.5 1283.4 1021 1131 946 874 1041 1229 5 5 4 3 5 4 97680 19221 757 18506 44387;44388;44389;44390;44391 51401;51402;51403;51404;51405 51402 5 TIDDLEEK Unmodified 961.46041 0.4604064 2196 Q6IRU2 Tpm4 Tropomyosin alpha-4 chain yes yes 0 0 0 0 4 0 1 54.405 54.405 3 0.0090324 18420 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.246 8.6832 58.788 44.98 0 0 0 69.29 55 46 0 0 0 65 1 1 0 0 0 1 3003.7 19222 2196 18507 44392 51406 51406 1 TIDDLEER Unmodified 989.46655 0.46655441 782 D3Z6I8 Tpm3 yes yes 0 0 0 0 2.5 0.5 1 1 47.606 47.606 2 0.00896 15467 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.74 6.6754 38.83 84.443 74.806 0 114.17 56.438 37 83 74 0 111 56 1 1 1 0 1 1 8753.7 19223 782 18508 44393;44394 51407;51408 51408 2 TIDDLKNQILNLTTDNANILLQIDNAR Unmodified 3051.62 0.62004194 659 CON__P13645 yes yes 0 0 0 1 10 0.816 1 1 1 104.34 104.34 4 1.6748E-20 34419 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.674 74.527 0 31.521 39.037 0 0 29.848 0 30 37 0 0 28 0 3 3 0 0 2 8659.6 + 19224 659 18509 44395;44396;44397 51409;51410;51411;51412 51412 4 TIDEELER Unmodified 1003.4822 0.48220447 758 D3Z2J6;Q9D710 Tmx2 Thioredoxin-related transmembrane protein 2 yes no 0 0 0 0 1 0 1 46.577 46.577 2 0.01236 13803 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.698 16.45 69.349 0 66.624 75.343 83.357 0 65 0 65 74 83 0 1 0 1 1 1 0 9555.2 19225 758 18510 44398 51413 51413 1 TIDFDAYSVGR Unmodified 1242.5881 0.58806652 2212 Q6P1J1;Q71H75 Crmp1 yes no 0 0 0 0 8.67 3.09 1 1 1 64.693 64.693 2 3.945E-10 21487 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 139.43 95.084 334.59 202.67 399.82 162.34 375.16 432.75 315 213 389 158 380 416 3 2 3 1 3 3 60143 19226 2212 18511 44399;44400;44401 51414;51415;51416 51415 3 TIDIEPDIETLLSQQSGNS Unmodified 2058.9957 0.99570907 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 0 4 0 1 96.499 96.499 3 0.043328 34451 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 30.416 13.337 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1613.2 19227 54 18512 44402 51417 51417 1 TIDKPAWLGFLGPVIK Unmodified 1754.0131 0.013077874 865 G3X9T8;G3X8Q5;E9PZD8;Q61147 Cp Ceruloplasmin yes no 0 0 0 1 12 0 1 87.84 87.84 3 0.00071453 24890 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.885 42.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19228 865 18513 44403 51418 51418 1 TIDQIHK Unmodified 853.46577 0.46576654 119 A0A0J9YUS5;E9PVC6;E9Q9E1;E9PVC5;Q6NZJ6 Eif4g1 Eukaryotic translation initiation factor 4 gamma 1 yes no 0 0 0 0 6 0 1 41.759 41.759 3 0.03885 11417 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.17 11.191 78.799 42.538 65.368 45.173 64.294 47.201 74 46 65 46 65 46 1 1 1 1 1 1 23285 19229 119 18514 44404 51419 51419 1 TIDTSPPVDIFATASAAAPVSSAK Unmodified 2316.1849 0.18490682 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 9.33 2.62 1 1 1 80.587 80.587 3 1.9573E-16 28916 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.308 74.543 39.561 56.946 37.187 86.748 113.17 9.594 37 56 37 83 112 9 2 3 1 2 3 1 14197 19230 2129 18515 44405;44406;44407 51420;51421;51422;51423 51421 4 TIDWVSFVEVMPQNQK Unmodified 1919.9451 0.94513424 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 0 10 2.16 1 1 1 90.094 90.094 3;4 1.3319E-05 31887 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.45 82.438 109.1 54.765 47.267 39.747 56.75 20.254 102 56 47 37 56 19 2 2 2 1 2 1 12499 19231 3156 18516 44408;44409;44410 51424;51425;51426 51425 3 TIEAEAAHGTVTR Unmodified 1354.6841 0.68409218 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 4 0 1 35.662 35.662 3 1.356E-07 9461 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.72 84.192 30.044 0 0 0 67.99 0 28 0 0 0 65 0 1 0 0 0 1 0 6433.4 19232 1618 18517 44411 51427 51427 1 TIEAHSR Unmodified 812.41407 0.41406533 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 7.67 3.86 1 1 1 20.863 20.863 2 0.015212 3049 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.5 58.713 41.627 31.124 36.005 34.027 47.877 29.412 39 31 35 33 47 28 2 2 2 2 2 2 19842 19233 1158 18518 44412;44413;44414 51428;51429;51430 51428 3 TIEANGR Deamidation (N) 760.37153 0.37153181 2212;1850 P97427;Q6P1J1;Q71H75 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 1 0 0 3 0 1 31.205 31.205 2 0.034804 7930 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 152.39 44.716 359.1 396.08 444.87 587.99 568.43 418.71 339 402 459 572 583 408 1 1 1 1 1 1 75789 19234 1850;2212 18519 44415 51431 51431 750 1 TIEDDDLK Unmodified 947.44476 0.44475633 2015 Q3UYC0 Ppm1h Protein phosphatase 1H yes yes 0 0 0 0 3 0 1 50.609 50.609 2 0.040516 16935 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.494 9.7855 30.044 0 0 0 46.111 58.38 28 0 0 0 46 56 1 0 0 0 1 1 3049.3 19235 2015 18520 44416 51432 51432 1 TIEELEKELLNGQK Deamidation (N) 1643.8618 0.86178177 1994 Q3ULJ0;D3Z0L6 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes no 0 1 0 1 5 0 1 79.366 79.366 4 0.0058753 29822 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.314 35.99 39.414 56.926 0 40.441 0 0 37 56 0 37 0 0 1 1 0 1 0 0 2112.6 19236 1994 18521 44417 51433 51433 794 1 TIEELQQK Unmodified 987.52368 0.52367535 664;649;663 CON__Q9UE12;CON__Q15323;CON__REFSEQ:XP_986630;Q8K0Y2;Q61897;CON__O76014;CON__O76011;CON__Q8IUT8;CON__Q9D646;CON__A2A5Y0;Q9D646;Q61765;CON__Q14525 Krt33a;Krt33b;Krt34;Krt31 Keratin, type I cuticular Ha3-I;Keratin, type I cuticular Ha3-II;Keratin, type I cuticular Ha4;Keratin, type I cuticular Ha1 no no 0 0 0 0 5 0 1 51.313 51.313 2 0.010799 16643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.027 48.945 0 0 20.173 8.6347 0 148.17 0 0 19 9 0 139 0 0 1 1 0 1 3363.8 + 19237 664;649;663 18522 44418 51434 51434 1 TIEEQLDEEHLESHR Unmodified 1863.8599 0.85988429 1012 F7AA26;A2API8;O54931 Pakap;Akap2 A-kinase anchor protein 2 yes no 0 0 0 0 1 0 1 45.772 45.772 4 1.3361E-05 13440 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.42 64.543 59.613 24.789 58.804 0 0 69.29 56 28 56 0 0 65 1 1 1 0 0 1 3650.7 19238 1012 18523 44419 51435 51435 1 TIEEVVGR Unmodified 901.4869 0.48689592 1562 P47738;A0A0G2JEU1;A0A0G2JF60;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 5 0 1 49.752 49.752 2 0.013425 15857 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.251 17.253 126.75 156.12 206.02 105.5 188.66 0 120 158 204 111 185 0 1 1 1 1 1 0 17895 19239 1562 18524 44420 51436 51436 1 TIEEYAICPDLK Unmodified 1450.7014 0.70138172 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 8.33 3.3 2 1 68.777 68.777 2;3 0.00011143 24325 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.625 50.551 306.23 182.53 314.96 300.3 237.08 338.62 288 185 315 296 241 324 3 2 3 3 2 3 18735 19240 3022 18525 44421;44422;44423 51437;51438;51439;51440 51438 4 TIEGTAR Unmodified 746.39227 0.39226725 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 4.5 0.5 1 1 29.252 29.252 2 0.0053865 6571 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 134.12 44.421 247.37 0 262.76 145.77 0 148.17 232 0 250 139 0 139 2 0 2 1 0 1 25297 19241 2187 18526 44424;44425 51441;51442 51441 2 TIEIEGLR Unmodified 929.5182 0.51819605 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 57.951 57.951 2 0.0012978 19890 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 142.36 79.061 1210 765.09 1034 929.76 1044.2 1188.6 1137 812 1042 925 1066 1143 5 5 5 5 4 5 188960 19242 1557 18527 44426;44427;44428;44429 51443;51444;51445;51446;51447 51443 5 TIEIQAVNALDEK Unmodified 1442.7617 0.76167379 304 F6VG18;A0A1L1SSX7;Q9JHQ5;A0A1L1ST13 Lztfl1 Leucine zipper transcription factor-like protein 1 yes no 0 0 0 0 5 0 1 70.39 70.39 3 0.00053278 25478 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.533 29.107 20.215 0 28.93 28.378 26.656 38.681 19 0 28 28 28 37 1 0 1 1 1 1 1799.8 19243 304 18528 44430 51448 51448 1 TIELDGK Unmodified 774.41233 0.41233399 1742;2065;3040;1685 P61028;P62821;Q5SW88;Q5SW86;Q9D1G1 Rab8b;Rab1A;Rab1;Rab1b Ras-related protein Rab-8B;Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 0 6 0.816 1 1 1 53 53 2 0.016214 16704 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.17 41.259 482.37 312.82 536.2 457.61 469.76 207.03 454 333 534 456 476 199 3 3 3 3 3 1 74516 19244 1685;1742;2065;3040 18529 44431;44432;44433 51449;51450;51451 51450 3 TIEYLEEVAVNFAK Unmodified 1624.8348 0.83483874 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 9.33 2.62 1 1 1 95.774 95.774 3 2.8493E-05 34584 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.964 54.893 74.683 27.469 48.562 7.6936 28.935 0 70 28 47 9 28 0 3 1 2 1 2 0 7265 19245 2435 18530 44434;44435;44436 51452;51453;51454 51453 3 TIEYLQPNPASR Unmodified 1387.7096 0.70957864 491;2155 A2ALV3;Q62420;Q8BXU5;A2ALV1;Q62419 Sh3gl2;Sh3gl1 Endophilin-A1;Endophilin-A2 no no 0 0 0 0 8.5 2.69 1 1 1 1 54.327 54.327 2;3 1.8347E-22 16566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.9 125.54 356.59 272.69 206.5 301.61 442.73 295.99 334 279 203 288 444 287 5 5 3 5 5 5 135420 19246 491;2155 18531 44437;44438;44439;44440 51455;51456;51457;51458;51459;51460 51456 6 TIFAYFSGSK Unmodified 1119.5601 0.56006086 2934 Q9CQM5 Txndc17 Thioredoxin domain-containing protein 17 yes yes 0 0 0 0 1 0 1 77.268 77.268 2 5.2866E-06 26838 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 132.78 73.134 98.675 90.451 110.53 81.909 118.14 105.36 93 93 111 83 120 102 1 1 1 1 1 1 12720 19247 2934 18532 44441 51461 51461 1 TIFINQPQLTK Unmodified 1301.7343 0.73433683 121 A0A0M3HEP7;P70704;A0A0J9YV34;Q3U9N5;F6Q8P7;E9Q4J5 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 10.5 0.5 1 1 66.886 66.886 2 2.5731E-13 19015 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 151.07 111.45 59.76 65.13 0 0 0 59.696 56 65 0 0 0 56 1 1 0 0 0 1 8635.8 19248 121 18533 44442;44443 51462;51463 51462 2 TIFLLHR Unmodified 898.53887 0.53887191 3292 Q9QZE7;A0A1D5RLR0 Tsnax Translin-associated protein X yes no 0 0 0 0 12 0 1 55.348 55.348 3 0.0010807 12306 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 135.87 73.868 29.865 0 30.145 0 0 0 28 0 28 0 0 0 1 0 1 0 0 0 13700 19249 3292 18534 44444 51464 51464 1 TIFMWYR Unmodified 1015.495 0.49495818 1702 P61922;Q3TUE8;F7C9G3;F6RN86 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 1 0 1 75.425 75.425 2 0.0024108 25970 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 152.26 115.17 78.948 0 76.371 74.057 120.88 35.993 74 0 74 74 120 37 1 0 1 1 1 1 10846 19250 1702 18535 44445 51465 51465 1 TIFPLFMK Unmodified 995.55141 0.55141043 2979 Q9CWL8 Ctnnbl1 Beta-catenin-like protein 1 yes yes 0 0 0 0 1 0 1 86.451 86.451 3 0.047732 30712 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 43.808 24.031 20.387 0 0 0 18.538 38.913 19 0 0 0 19 37 1 0 0 0 1 1 973.38 19251 2979 18536 44446 51466 51466 1 TIFVGGVPRPLR Unmodified 1310.7823 0.78229008 109 Q5SU47;F6T0J8;D3Z1R6;D3Z5R9;Q5SU48;A0A0R4J102;A0A0H2UH22;E9Q5X2;E9Q969;Q812E0;Q7TN99;Q7TN98 Cpeb4;Cpeb3;Cpeb2 Cytoplasmic polyadenylation element-binding protein 2;Cytoplasmic polyadenylation element-binding protein 3;Cytoplasmic polyadenylation element-binding protein 4 yes no 0 0 0 1 6.5 5.5 1 1 57.945 57.945 3 0.0083665 13289 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.27 30.181 48.678 98.099 109.26 105.85 185.86 81.059 46 97 111 106 185 79 1 2 2 2 2 1 22325 19252 109 18537 44447;44448 51467;51468 51468 2 TIFVLTK Unmodified 820.50584 0.50584045 1653 P58281;H7BX01;E0CXD1;P58682 Opa1;Tlr8 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1;Toll-like receptor 8 yes no 0 0 0 0 9.25 4.82 1 1 1 1 69.544 69.544 2 0.01413 19743 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.93 34.753 137.66 154.16 96.668 78.824 304.38 170.59 129 148 93 79 297 167 2 2 1 1 3 2 109970 19253 1653 18538 44449;44450;44451;44452 51469;51470;51471;51472 51470 4 TIGDGNFAVVK Unmodified 1119.5924 0.59242362 102 A0A0G2JGQ6;Q9JLM8;A0A0G2JE54;Q8CCN4;A0A0G2JGH1;Q1EDH1;H7BX36;A0A0G2JEN4 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 9 2.35 1 2 1 61.903 61.903 2;3 0.00045044 19456 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.979 52.252 20.244 67.098 41.676 112.56 43.177 77.652 19 65 42 106 46 74 1 2 1 3 1 1 13537 19254 102 18539 44453;44454;44455;44456 51473;51474;51475;51476 51474 4 TIGGGDDSFNTFFSETGAGK Deamidation (N) 2007.8698 0.86978027 1313;1794 P05213;A0A2R8VHF3;P68369;P05214 Tuba1b;Tuba1a;Tuba3a Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 1 0 0 5.5 0.5 2 2 77.959 77.959 3 7.8976E-11 27917 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.17 90.966 98.946 94.661 140.32 145.35 167.59 164.44 93 94 139 140 172 158 3 2 4 4 5 4 36677 19255 1313;1794 18540 44457;44458;44459;44460 51477;51478;51479;51480;51481 51477 381 5 TIGGGDDSFNTFFSETGAGK Unmodified 2006.8858 0.88576469 1313;1794 P05213;A0A2R8VHF3;P68369;P05214 Tuba1b;Tuba1a;Tuba3a Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain no no 0 0 0 0 8.05 2.94 2 6 6 1 5 78.311 78.311 3;4 8.153E-62 27609 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 164.57 142.41 1763.2 1458.3 1819.1 1852.2 1776 2096.1 1657 1471 1799 1783 1788 2013 16 20 18 16 15 19 1545400 19256 1313;1794 18540 44461;44462;44463;44464;44465;44466;44467;44468;44469;44470;44471;44472;44473;44474;44475;44476;44477;44478;44479;44480 51482;51483;51484;51485;51486;51487;51488;51489;51490;51491;51492;51493;51494;51495;51496;51497;51498;51499;51500;51501;51502;51503;51504;51505;51506;51507 51494 26 TIGGGDDSFTTFFCETGAGK Unmodified 2066.8891 0.88913551 44 A0A0A0MQA5;P68368;A0A087WQS4;A0A087WRB4;A0A087WSB0;A0A087WSL5;A0A087WS35 Tuba4a Tubulin alpha-4A chain yes no 0 0 0 0 7.83 2.54 1 1 1 2 1 80.577 80.577 3;4 1.3922E-49 29664 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 157.54 147.79 563.89 207.92 805.14 267.09 882.12 698.8 530 213 766 260 878 675 6 3 8 3 9 7 310430 19257 44 18541 44481;44482;44483;44484;44485;44486 51508;51509;51510;51511;51512;51513;51514;51515;51516 51509 9 TIGNLHLHK Unmodified 1031.5876 0.58761301 2652 Q8R2W9 Pank3 Pantothenate kinase 3 yes yes 0 0 0 0 12 0 1 35.995 35.995 4 0.056255 5361 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.357 9.6134 239.26 177.14 213.22 0 0 0 225 185 208 0 0 0 1 1 1 0 0 0 7354 19258 2652 18542 44487 51517 51517 1 TIGVAAK Unmodified 658.40138 0.40137537 2137 Q61699;E9Q0U7;D3Z027 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 8.5 0.5 1 1 44.772 44.772 2 0.017579 11463 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.36 33.771 467.27 524.9 1080.1 837.32 953.56 779.75 440 519 1064 827 974 757 2 2 3 2 2 2 74772 19259 2137 18543 44488;44489 51518;51519;51520 51518 3 TIGVSNFNPLQIER Unmodified 1586.8417 0.84165545 1548 P45376 Akr1b1 Aldose reductase yes yes 0 0 0 0 10 2.16 1 1 1 73.341 73.341 2;3 8.0712E-31 24893 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 163.51 114.06 99.015 63.891 75.936 95.134 55.813 93.808 93 65 74 88 56 88 2 1 1 2 1 2 36213 19260 1548 18544 44490;44491;44492 51521;51522;51523 51521 3 TIGYPWTLVYGTGK Unmodified 1554.8082 0.80823006 2028 Q4KMM3;E9Q0A7;A0A2R8VHT3;B1H3M0;A0A2R8VHF5 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 9.8 4.45 1 1 2 1 83.173 83.173 2;3 2.5208E-05 23090 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.592 74.177 480.49 430.69 408.96 521.71 342.47 643.69 452 438 404 499 356 613 6 5 5 6 5 6 107420 19261 2028 18545 44493;44494;44495;44496;44497 51524;51525;51526;51527;51528;51529;51530;51531 51529 8 TIHGLIYNALK Unmodified 1241.7132 0.71320746 2733;2102 Q60996;Q91V89 Ppp2r5c;Ppp2r5d Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 0 0 0 11 0 1 62.479 62.479 2 3.7165E-06 16720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.867 49.758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19262 2102;2733 18546 44498 51532 51532 1 TIHQEDELIEIQSDTGTWYQR Unmodified 2561.2034 0.20341043 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 3.5 0.5 1 1 67.637 67.637 3 5.8253E-30 24263 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.46 111.93 15.403 7.0163 0 0 9.0934 9.3345 15 7 0 0 9 9 2 1 0 0 1 1 18763 19263 3216 18547 44499;44500 51533;51534 51534 2 TIIEDAK Unmodified 788.42798 0.42798405 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8 3.56 1 1 1 49.43 49.43 2;3 0.0088478 15242 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.116 20.135 156.48 142.41 456.76 394.21 141 165.47 148 148 447 388 148 159 1 1 2 2 1 1 31859 19264 2517 18548 44501;44502;44503 51535;51536;51537 51536 3 TIIFVETK Unmodified 949.54843 0.54843354 1963 Q501J6;Q3U741;Q3TU25 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 8 0 1 66.45 66.45 2 0.037733 21666 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.625 32.068 69.11 0 106.7 74.523 0 0 65 0 102 74 0 0 1 0 1 1 0 0 2878.6 19265 1963 18549 44504 51538 51538 1 TIINADK Unmodified 773.42832 0.42831841 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 7 0 1 47.259 47.259 2 0.027486 13224 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.099 25.754 99.377 81.611 0 0 122.93 75.376 93 83 0 0 120 74 1 1 0 0 1 1 8661.4 19266 2164 18550 44505 51539 51539 1 TIINADKDGDGR Unmodified 1273.6262 0.62624295 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 1 7.8 2.79 1 1 1 1 1 42.056 42.056 3 6.1845E-15 12269 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 139.74 101.3 778.05 830.29 1205.7 851.38 599.41 761.07 732 835 1199 847 626 727 6 7 8 7 6 5 295610 19267 2164 18551 44506;44507;44508;44509;44510 51540;51541;51542;51543;51544;51545;51546;51547 51540 8 TIIPLISQCTPK Unmodified 1369.7639 0.7639224 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 9.17 3.87 2 3 1 2 3 1 71.997 71.997 2;3;4 2.1716E-32 20731 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 183.85 132.41 1255.8 1252.3 1354.3 1327 1237 1541.4 1181 1275 1343 1314 1251 1475 8 11 9 14 9 10 994050 19268 1327 18552 44511;44512;44513;44514;44515;44516;44517;44518;44519;44520;44521;44522 51548;51549;51550;51551;51552;51553;51554;51555;51556;51557;51558;51559;51560;51561;51562;51563;51564 51557 17 TIITYPWFQNSSVILFLNK Deamidation (N) 2284.2144 0.21435646 1428;1427 P21279;P21278 Gnaq;Gna11 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-11 no no 0 1 0 0 12 0 1 106.2 106.2 3 1.4573E-09 29390 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.75 89.208 7.4545 11.201 0 0 6.2089 1.9548 7 11 0 0 6 2 1 1 0 0 1 1 1238.4 19269 1428;1427 18553 44523 51565 51565 526 1 TIITYPWFQNSSVILFLNK Unmodified 2283.2303 0.23034087 1428;1427 P21279;P21278 Gnaq;Gna11 Guanine nucleotide-binding protein G(q) subunit alpha;Guanine nucleotide-binding protein subunit alpha-11 no no 0 0 0 0 13 0 1 102.9 102.9 3 4.5185E-08 41795 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.007 65.29 60.06 5.5262 0 0 19.874 0 56 9 0 0 19 0 1 1 0 0 1 0 2682.1 19270 1428;1427 18553 44524 51566 51566 1 TILALMK Unmodified 788.483 0.48299651 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 6.5 5.5 1 1 72.692 72.692 2 0.010125 24892 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.78 68.227 207.41 100.4 222.17 100.36 102.82 240.11 195 111 216 102 108 228 2 2 2 1 1 2 26686 19271 1848 18554 44525;44526 51567;51568 51567 2 TILEQVLPI Unmodified 1024.6168 0.61684746 1948 Q3TYL7;Q9QYJ3 Dnajb1 DnaJ homolog subfamily B member 1 yes no 0 0 0 0 8 0 1 96.822 96.822 2 0.0088077 34788 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.899 54.069 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 2852.2 19272 1948 18555 44527 51569 51569 1 TILGDFQK Unmodified 920.49673 0.49673232 3068 Q9D5V6 Syap1 Synapse-associated protein 1 yes yes 0 0 0 0 8 0 1 65.138 65.138 2 0.021569 20997 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.318 30.324 69.23 0 86.522 65.888 0 88.478 65 0 83 65 0 83 1 0 1 1 0 1 3926.9 19273 3068 18556 44528 51570 51570 1 TILGPTENIK Unmodified 1084.6128 0.61282471 2988 Q9CXT8 Pmpcb Mitochondrial-processing peptidase subunit beta yes yes 0 0 0 0 8 0 1 58.785 58.785 2 0.00022959 18044 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.731 29.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19274 2988 18557 44529 51571 51571 1 TILMMGR Unmodified 820.42992 0.42991509 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 11 0 1 57.24 57.24 2 0.027229 14510 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.319 47.899 0 79 0 0 0 0 0 79 0 0 0 0 0 1 0 0 0 0 18042 19275 1652 18558 44530 51572 51572 1 TILQCALNR Unmodified 1087.5808 0.58081308 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 10 0 1 57.542 57.542 2 0.02249 14943 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.823 26.489 0 0 77.176 64.924 80.876 86.17 0 0 74 65 83 83 0 0 1 1 1 1 4760 19276 372 18559 44531 51573 51573 1 TILQCALNRPAFFAER Unmodified 1905.9883 0.98833646 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 1 11 0 1 69.793 69.793 3 2.8927E-07 19966 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.04 75.09 130 0 0 0 0 0 130 0 0 0 0 0 1 0 0 0 0 0 53400 19277 372 18560 44532 51574 51574 1 TILSDDWK Unmodified 976.48656 0.48656157 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7.5 0.5 1 1 65.789 65.789 2;3 0.013464 22009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.181 45.954 342.4 396.67 286.04 164.61 437.38 374.24 322 399 284 158 429 360 2 3 2 2 2 2 39715 19278 1362 18561 44533;44534 51575;51576;51577 51575 3 TILSGFIIR Unmodified 1018.6175 0.61751616 588 B1ATV0;Q9WVD4;Q3LRV6;A0A1B0GT29;Q8K4W8;Q61418;P51791;A0A1B0GRR0;E9Q2I1;Q3TF45 Clcn5;Clcn4-2;Clcn3;Clcn4 Chloride channel protein;H(+)/Cl(-) exchange transporter 5;H(+)/Cl(-) exchange transporter 4;H(+)/Cl(-) exchange transporter 3 yes no 0 0 0 0 12 0 1 76.511 76.511 2 0.01645 20450 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.224 34.485 0 0 0 49.219 56.315 0 0 0 0 46 56 0 0 0 0 1 1 0 3602.7 19279 588 18562 44535 51578 51578 1 TILSLMTR Unmodified 933.53174 0.53173762 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 6.5 5.5 1 1 70.471 70.471 2 0.00097439 23911 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.04 83.75 153.25 86.308 138.17 140.83 152.18 192.87 144 93 139 139 158 185 1 1 1 1 1 1 27749 19280 2020 18563 44536;44537 51579;51580 51579 2 TILSNQTVDIPENVEITLK Unmodified 2126.1471 0.14706475 242 A0A140T8T4;P51410;D3YZT0;D3Z629 Rpl9 60S ribosomal protein L9 yes no 0 0 0 0 6 0 1 81.723 81.723 3 4.2677E-05 30250 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.588 31.301 0 19.729 29.112 0 0 29.848 0 19 28 0 0 28 0 1 1 0 0 1 4195 19281 242 18564 44538 51581 51581 1 TILTAIHCFPYVK Unmodified 1561.8327 0.83267067 270 A0A1D5RLE0;E9QMR2;A0A1D5RMM1;F8VPN7;Q8BIK4 Dock9 Dedicator of cytokinesis protein 9 yes no 0 0 0 0 12 0 1 73.271 73.271 3 0.00010609 19060 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.911 66.53 0 0 46.776 67.257 53.159 67.773 0 0 46 65 56 65 0 0 1 1 1 1 6238.7 19282 270 18565 44539 51582 51582 1 TILTLTGVSSLEDVK Unmodified 1574.8767 0.87670355 2547 Q8CHP8 Pgp Phosphoglycolate phosphatase yes yes 0 0 0 0 11 2 1 1 81.933 81.933 2;3 1.417E-31 28281 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 162.93 130.6 69.109 63.613 53.051 96.044 129.91 48.274 65 65 56 93 130 46 1 1 1 2 2 1 12912 19283 2547 18566 44540;44541 51583;51584 51583 2 TIMHLMINNTK Unmodified 1314.6788 0.67881256 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 0 0 0 6.5 5.5 2 2 59.196 59.196 3;4 1.1565E-08 19397 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 119.74 16.432 467.46 186.59 636.39 347.57 186.92 595.89 439 194 615 343 185 564 4 2 5 4 1 5 167410 19284 118;1534;1082 18567 44542;44543;44544;44545 51585;51586;51587;51588;51589 51586 5 TIMHLMINNTK Deamidation (N) 1315.6628 0.66282815 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 1 0 0 9 0 1 62.316 62.316 3 0.0060277 19048 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.49 37.114 59.602 44.185 44.264 57.397 62.376 86.698 56 46 46 56 65 83 1 1 1 1 1 1 5585.1 19285 118;1534;1082 18567 44546 51590 51590 57 1 TIMHLMINNTK Oxidation (M) 1330.6737 0.67372718 118;1534;1082 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm1;Dnm2 Dynamin-1;Dynamin-2 no no 0 0 1 0 12 0 1 55.387 55.387 3 0.0013681 12334 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.062 16.629 113.45 24.446 28.197 93.537 51.359 0 106 28 28 88 51 0 2 1 1 2 1 0 4948 19286 118;1534;1082 18567 44547 51591;51592 51591 14 2 TIMHLMINNVK Unmodified 1312.6995 0.699548 960 E9QLL2;Q8BZ98;F2Z460;E0CXZ8 Dnm3 Dynamin-3 yes no 0 0 0 0 1 0 1 64.048 64.048 3 0.00046198 21516 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.596 46.911 39.365 21.173 38.565 0 0 34.112 37 23 37 0 0 32 1 1 1 0 0 1 3973.1 19287 960 18568 44548 51593 51593 1 TINELGEK Unmodified 902.47091 0.4709115 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 49.883 49.883 2 0.012738 16048 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.496 18.671 779.49 861.88 990.61 656.82 700.23 1041.8 736 875 994 667 718 996 3 3 3 3 2 3 72433 19288 3049 18569 44549;44550;44551 51594;51595;51596 51594 3 TINEVENQILTR Unmodified 1428.7573 0.75725712 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 7 3.54 1 1 1 1 64.726 64.726 2;3 1.2939E-17 22907 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.55 56.071 99.224 114.52 56.483 177.82 71.568 176.78 93 111 56 167 74 167 2 2 1 4 2 3 45328 19289 418;310 18570 44552;44553;44554;44555 51597;51598;51599;51600 51598 4 TINLYPLTNYTFGTK Unmodified 1744.9036 0.903587 2926 Q9CQF3 Nudt21 Cleavage and polyadenylation specificity factor subunit 5 yes yes 0 0 0 0 11 0.816 1 1 1 83.193 83.193 3 6.6662E-08 26000 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.67 93.293 124.08 55.607 18.76 75.417 48.184 28.473 116 56 19 69 47 28 3 2 1 2 1 1 26692 19290 2926 18571 44556;44557;44558 51601;51602;51603 51602 3 TINWSLLEK Unmodified 1102.6023 0.60226003 1483 Q1MX41;Q1MX43;Q1MX40;Q1MX42;P28867 Prkcd Protein kinase C;Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit yes no 0 0 0 0 9 0 1 75.438 75.438 2 0.055543 25151 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.784 15.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2456.6 19291 1483 18572 44559 51604 51604 1 TIPAWATLSASQLAR Unmodified 1584.8624 0.86239089 1917 Z4YKA3;Z4YKB8;Q3TEA8;A2AM70;A2AM62;A2AM63 Hp1bp3 Heterochromatin protein 1-binding protein 3 yes no 0 0 0 0 11 0 1 75.521 75.521 2 0.00022495 22485 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.617 40.533 0 0 15.148 0 29.288 0 0 0 14 0 28 0 0 0 1 0 1 0 8136 19292 1917 18573 44560 51605 51605 1 TIPELLK Unmodified 812.50076 0.50075507 3251 Q9JMF3 Gng13 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 yes yes 0 0 0 0 8 0 1 66.378 66.378 2 0.028698 21570 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.323 28.341 118.59 0 85.485 83.568 109.34 85.358 111 0 83 83 111 83 1 0 1 1 1 1 11921 19293 3251 18574 44561 51606 51606 1 TIPGDTAWLLYDTYGFPVDLTGLIAEEK Unmodified 3097.5536 0.55358508 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 13 0 1 112.64 112.64 4 2.0316E-08 44617 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.877 36.952 0 0 0 5.1547 16.499 0 0 0 0 5 16 0 0 0 0 1 1 0 989.55 19294 2382 18575 44562 51607 51607 1 TIPGTALVEMGDEYAVER Unmodified 1949.9404 0.9404428 2794 Q921F4 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 0 5 0 1 76.724 76.724 3 6.7511E-05 28565 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.334 45.454 20.149 0 39.932 0 19.874 0 19 0 37 0 19 0 1 0 1 0 1 0 2280.2 19295 2794 18576 44563 51608 51608 1 TIPIDGDFFSYTR Unmodified 1530.7355 0.73545904 1562 P47738;A0A0G2JEU1;A0A0G2JFQ0;D3YYF3 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 8.8 2.23 2 1 1 1 79.089 79.089 2;3 5.9116E-27 28202 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 171.74 132.12 149.85 73.335 0 149.51 128.51 161.85 140 74 0 139 130 157 3 2 0 3 2 4 31651 19296 1562 18577 44564;44565;44566;44567;44568 51609;51610;51611;51612;51613 51609 5 TIPIKYPLK Unmodified 1071.6692 0.66921738 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 12 0 1 61.242 61.242 3 0.057922 14599 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.123 16.714 0 0 58.019 57.75 0 78.884 0 0 56 56 0 74 0 0 1 1 0 1 8811.4 19297 2459 18578 44569 51614 51614 1 TIPNDPGFVVTLSNR Unmodified 1628.8522 0.85222014 848 E9PXY8;F8VPX1;Q6A4J8 Usp7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 yes no 0 0 0 0 7 0 1 69.704 69.704 3 0.0008174 23824 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.246 35.01 0 29.792 0 30.098 26.907 29.08 0 28 0 28 28 28 0 1 0 1 1 1 3518.5 19298 848 18579 44570 51615 51615 1 TIPVVFK Unmodified 802.49528 0.49527576 1948 Q3TYL7;Q9QYJ3 Dnajb1 DnaJ homolog subfamily B member 1 yes no 0 0 0 0 10.5 0.5 1 1 66.837 66.837 2 0.027106 18513 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.986 42.812 117.91 98.614 117.45 317.04 162.33 182.98 111 102 120 315 167 176 1 1 1 2 1 1 18875 19299 1948 18580 44571;44572 51616;51617 51617 2 TIPWLENR Unmodified 1027.5451 0.5450795 418;3209 A1BN54;Q7TPR4;Q9JI91 Actn1;Actn2 Alpha-actinin-1;Alpha-actinin-2 no no 0 0 0 0 10 2.16 1 1 1 66.38 66.38 2 0.0089146 20944 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.6 33.202 581.88 317.15 579.36 248.97 290.25 230.99 547 333 566 250 296 222 4 3 4 2 3 2 59466 19300 418;3209 18581 44573;44574;44575 51618;51619;51620;51621 51619 4 TIPYSDK Unmodified 822.41233 0.41233399 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 6.5 0.5 1 1 48.299 48.299 2 0.0090781 14502 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 125.01 50.29 187.52 42.554 186.41 133.3 108.89 0 176 46 181 134 107 0 2 1 2 2 1 0 24494 19301 2517 18582 44576;44577 51622;51623 51622 2 TIPYSDKLFGMVLGSAPYTVPLPK Unmodified 2593.3866 0.38658352 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08;E9PVS5 Immt MICOS complex subunit Mic60 yes no 0 0 0 1 12 0 2 94.824 94.824 4;5 5.8363E-07 27272 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.914 49.427 37.356 65.754 104.98 39.367 75.428 91.656 35 65 102 37 74 88 2 2 2 2 1 2 5838 19302 2517 18583 44578;44579 51624;51625;51626 51626 3 TIQESSNLNEEDTGVTNR Unmodified 2005.9189 0.91885573 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 0 0 0 2 0 1 46.463 46.463 3 1.1985E-44 14577 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130.01 111.43 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19303 48 18584 44580 51627 51627 1 TIQESSNLNEEDTGVTNR Deamidation (N) 2006.9029 0.90287132 48 A0A0A0MQE8;B7ZCJ1;G3UWM5;B7ZCJ0;Q6DFV3;G3UX38 Arhgap21 Rho GTPase-activating protein 21 yes no 0 1 0 0 3 0 1 46.376 46.376 3 1.3899E-06 14978 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.24 70.021 29.842 17.891 18.714 13.929 13.688 9.2034 28 19 19 14 14 9 1 1 1 1 1 1 2430.5 19304 48 18584 44581 51628 51628 17 1 TIQEVAGYVLIALNTVER Unmodified 1988.0942 0.094241321 1874 Q9WVF5;Q01279 Egfr Epidermal growth factor receptor yes no 0 0 0 0 11 0 1 111.03 111.03 3 0.00027334 35980 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.524 31.136 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 634.4 19305 1874 18585 44582 51629 51629 1 TIQFVDWCPTGFK Unmodified 1597.7599 0.75989966 1794;3223 P68369;P05214;Q9JJZ2 Tuba1a;Tuba3a;Tuba8 Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 9.81 2.86 1 3 3 1 4 1 3 82.443 82.443 2;3;4 3.9164E-21 28358 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 159.09 129.54 2331.2 1905.5 2288.4 2621.2 2850.2 2455.8 2189 1937 2287 2561 2881 2366 12 13 13 17 12 14 2229200 19306 1794;3223 18586 44583;44584;44585;44586;44587;44588;44589;44590;44591;44592;44593;44594;44595;44596;44597;44598 51630;51631;51632;51633;51634;51635;51636;51637;51638;51639;51640;51641;51642;51643;51644;51645;51646;51647;51648;51649;51650;51651;51652 51637 23 TIQGDEEDLR Unmodified 1174.5466 0.54659564 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 3.83 4.18 2 1 2 1 43.115 43.115 2;3 7.4151E-21 13205 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 180.09 117.54 265.36 456.46 432.5 340.98 391.13 242.59 250 452 439 334 392 232 5 6 6 5 4 4 257320 19307 3106 18587 44599;44600;44601;44602;44603;44604 51653;51654;51655;51656;51657;51658;51659 51655 7 TIQNNFFDSSK Unmodified 1299.6095 0.60953025 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 7.5 0.5 1 1 62.087 62.087 2;3 0.00046581 20236 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.469 56.627 59.497 76.576 65.785 41.985 0 59.696 56 79 65 42 0 56 1 2 1 1 0 1 12828 19308 927 18588 44605;44606 51660;51661 51660 2 TIQQCCENILLNAAWLK Unmodified 2074.034 0.033966025 1899 Q11011;F6QYF8 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 11 2 1 1 85.684 85.684 3;4 9.2745E-07 33603 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.28 75.645 0 0 37 0 0 46 0 0 37 0 0 46 0 0 1 0 0 1 9991.6 19309 1899 18589 44607;44608 51662;51663 51663 2 TIQSSTGVIK Unmodified 1032.5815 0.58152458 784 D3Z709;Q9D415;Q3UVU8;D3Z508;D3Z6F4 Dlgap1 Disks large-associated protein 1 yes no 0 0 0 0 7.5 0.5 1 1 48.897 48.897 3 0.00029501 14022 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.82 46.076 48.361 103.94 79.496 85.981 0 69.29 46 102 83 83 0 65 1 1 1 1 0 1 3594 19310 784 18590 44609;44610 51664;51665 51664 2 TIQVDNTDAEGR Unmodified 1317.6161 0.61607219 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 3 0 1 41.526 41.526 2 1.1463E-17 12724 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 144.57 78.306 88.582 13.088 69.098 0 77.404 0 83 19 65 0 74 0 1 1 1 0 1 0 8145.7 19311 2904 18591 44611 51666 51666 1 TIRPMDIEAIEASVMK Unmodified 1802.927 0.92704134 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 1 8.75 2.49 2 1 1 79.01 79.01 3;4 0.00064154 28181 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.862 37.989 118.85 157.56 151.91 103.04 126.28 144.57 112 158 148 102 130 139 3 4 3 3 4 4 21290 19312 3016 18592 44612;44613;44614;44615 51667;51668;51669;51670 51668 4 TISALDLAPEVGK Unmodified 1312.7238 0.72383172 3299 Q9R0D8 Wdr54 WD repeat-containing protein 54 yes yes 0 0 0 0 6.5 0.5 1 1 72.751 72.751 3 1.0437E-06 26099 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.492 39.575 39.468 46.283 0 20.056 37.781 0 37 46 0 19 37 0 1 1 0 1 1 0 3693.6 19313 3299 18593 44616;44617 51671;51672 51671 2 TISEGHPSPR Unmodified 1079.536 0.53597137 197 A0A0R4J138;P50429 Arsb Arylsulfatase B yes no 0 0 0 0 4 0 1 27.411 27.411 3 0.026938 5643 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.419 12.915 0 108.53 0 0 0 29.848 0 102 0 0 0 28 0 1 0 0 0 1 2581.3 19314 197 18594 44618 51673 51673 1 TISHVIIGLK Unmodified 1079.6703 0.67028001 1665 P60122;D3YW60 Ruvbl1 RuvB-like 1 yes no 0 0 0 0 11 0 1 58.669 58.669 3 0.0014834 15096 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.1 37.969 118.3 160.14 0 194.55 0 138.58 111 158 0 178 0 130 1 1 0 1 0 1 21716 19315 1665 18595 44619 51674 51674 1 TISNLEGSPSR Unmodified 1159.5833 0.5833155 2249 Q6PH08;Q3UHT7;A0A1B0GS69;A0A1B0GSU7 Erc2 ERC protein 2 yes no 0 0 0 0 5.5 0.5 1 1 43.488 43.488 2 4.8217E-05 12304 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.752 64.457 0 19.431 46.959 55.977 35.354 48.027 0 19 46 56 37 46 0 1 1 2 1 1 8355.2 19316 2249 18596 44620;44621 51675;51676 51676 2 TISNVLLQYADIVSK Unmodified 1662.9192 0.91923707 1121 H3BJZ7;Q4KUS2;H3BKY4 Unc13a Protein unc-13 homolog A yes no 0 0 0 0 10.7 1.7 1 1 1 91.051 91.051 3 1.8754E-05 29618 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.341 48.479 14.936 0 53.203 42.735 0 24.518 14 0 51 42 0 23 1 0 2 2 0 1 7335.6 19317 1121 18597 44622;44623;44624 51677;51678;51679 51678 3 TISQAVNK Unmodified 859.47633 0.47633123 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 8 0 2 43.435 43.435 2;3 0.0027987 10796 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.279 47.179 20.131 18.401 27.384 38.316 26.199 38.694 19 19 28 37 28 37 1 1 1 1 1 1 4514.7 19318 513 18598 44625;44626 51680;51681 51681 2 TISQAVNKK Unmodified 987.57129 0.57129425 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 1 9.5 0.5 1 1 41.504 41.504 3 0.0063892 9408 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.2 30.324 523.6 394.41 390.3 531.79 475.22 649.49 492 410 391 516 499 622 2 2 1 2 2 2 44558 19319 513 18599 44627;44628 51682;51683 51682 2 TISSSLAVVDLIDAIQPGCINYDLVK Unmodified 2803.4677 0.46774696 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 0 9 0 1 105 105 4 3.5077E-05 36872 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.115 35.438 9.5993 0 9.6896 0 0 5.33 9 0 9 0 0 5 1 0 1 0 0 1 968.64 19320 269 18600 44629 51684 51684 1 TISSSSER Unmodified 865.41412 0.4141249 1135 I7HJQ9;Q9Z2C4 Mtmr1 Myotubularin-related protein 1 yes no 0 0 0 0 4 0 1 25.651 25.651 2 0.031661 4924 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.342 44.205 0 9.576 0 0 14.644 0 0 9 0 0 14 0 0 1 0 0 1 0 2703.6 19321 1135 18601 44630 51685 51685 1 TISVSGSTAK Unmodified 949.50803 0.50802529 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7.5 0.5 1 1 44.362 44.362 2 3.2018E-11 11201 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.49 98.229 20.215 44.688 28.908 90.089 0 49.036 19 42 28 84 0 46 1 1 1 2 0 1 7083.2 19322 570 18602 44631;44632 51686;51687 51687 2 TITEYAR Unmodified 852.43413 0.43413207 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 6 0.816 1 1 1 41.118 41.118 2 0.010715 11655 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 121.52 69.729 295.48 328.32 426.42 299.04 540.6 366.88 278 334 426 296 542 355 2 3 3 2 3 2 71472 19323 2555 18603 44633;44634;44635 51688;51689;51690 51688 3 TITFEQFQEALEELAK Unmodified 1895.9517 0.95165941 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 9.12 2.42 1 1 2 2 2 101.85 101.85 2;3;4 4.496E-34 41245 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.4 108.5 237.96 268.71 316.94 214.89 250.5 356.13 224 269 310 215 252 342 7 9 9 9 9 11 193410 19324 2291 18604 44636;44637;44638;44639;44640;44641;44642;44643 51691;51692;51693;51694;51695;51696;51697;51698;51699;51700;51701;51702;51703;51704 51702 14 TITIAVPDK Unmodified 956.55425 0.5542472 1396 P17047 Lamp2 Lysosome-associated membrane glycoprotein 2 yes yes 0 0 0 0 7.5 0.5 1 1 62.701 62.701 2 0.014352 19837 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.1 17.618 29.938 68.397 63.433 59.326 91.866 47.788 28 65 65 56 92 46 1 1 2 1 2 1 2995.9 19325 1396 18605 44644;44645 51705;51706 51706 2 TITITLK Unmodified 788.50076 0.50075507 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 10 0.816 1 1 1 63.122 63.122 2 0.024887 16843 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.28 45.273 373.84 235.67 268.82 201.89 428.06 240.62 351 241 260 194 426 232 3 2 2 2 3 2 55376 19326 927 18606 44646;44647;44648 51707;51708;51709 51709 3 TITLEVEPSDTIENVK Unmodified 1786.92 0.92002493 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 0 6.83 2.91 1 1 2 1 1 71.315 71.315 2;3;4 2.3912E-51 25975 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 184.17 162.3 341.2 263.98 138.68 354.04 427.35 428.37 320 270 143 338 435 412 7 6 3 6 6 6 289970 19327 58 18607 44649;44650;44651;44652;44653;44654 51710;51711;51712;51713;51714;51715;51716;51717 51712 8 TITLNVYK Unmodified 950.54368 0.54368251 1131 H7BXB6;Z4YLG3;Q80U30 Clec16a Protein CLEC16A yes no 0 0 0 0 10 2.16 1 1 1 57.493 57.493 2;3 0.005493 19660 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.616 27.465 378.97 56.275 279.88 309.03 232.79 312.09 355 56 270 302 240 299 2 1 1 2 1 2 30959 19328 1131 18608 44655;44656;44657 51718;51719;51720 51720 3 TITPQNAPR Unmodified 996.53524 0.53524309 23 A0A087WRN1;A0A087WQA0;F8WI22;Q8K019 Bclaf1 Bcl-2-associated transcription factor 1 yes no 0 0 0 0 6 0 1 36.264 36.264 2 0.0337 8899 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.916 27.612 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19329 23 18609 44658 51721 51721 1 TITSSYYR Unmodified 989.48181 0.48181054 1742;2065;3040 P62821;Q5SW88;Q9D1G1 Rab1A;Rab1;Rab1b Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 0 9.75 2.38 1 1 1 1 42.976 42.976 2 0.0012634 10596 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.79 98.542 98.641 390.29 466.22 121.82 337.8 423.08 93 380 458 120 334 401 1 3 4 1 2 3 89206 19330 1742;2065;3040 18610 44659;44660;44661;44662 51722;51723;51724;51725 51723 4 TITSTYYR Unmodified 1003.4975 0.4974606 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 7.5 0.5 1 1 44.028 44.028 2 0.00068168 11053 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.17 91.248 206.16 130.23 225.3 135.76 218.06 230.43 194 139 222 130 222 222 2 2 2 1 2 2 22803 19331 2250 18611 44663;44664 51726;51727 51727 2 TITTAYYR Unmodified 987.50255 0.50254598 1761;1743;1685;3010;1513 P61028;P35276;D3YWL1;D3YW33;Q9CZT8;A2A7Z6;P63011;P62823;A0A286YDR2;Q9CXS2 Rab8b;Rab3d;Rab3b;Rab3a;Rab3c Ras-related protein Rab-8B;Ras-related protein Rab-3D;Ras-related protein Rab-3B;Ras-related protein Rab-3A;Ras-related protein Rab-3C no no 0 0 0 0 10 2 1 1 1 1 1 1 1 46.099 46.099 2;3 1.636E-16 14202 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 186.11 117.89 753.39 594.06 1075.5 864.54 411.92 521.11 710 621 1066 852 423 499 3 3 5 4 2 2 259690 19332 1685;1513;3010;1761;1743 18612 44665;44666;44667;44668;44669;44670;44671 51728;51729;51730;51731;51732;51733;51734;51735 51735 8 TITYSINFFSK Unmodified 1319.6762 0.67615325 2342 Q80YV4;F7B6K4 Pank4 Pantothenate kinase 4 yes no 0 0 0 0 11 0 1 79.006 79.006 3 0.015838 24119 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.706 18.537 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 2541.1 19333 2342 18613 44672 51736 51736 1 TIVAINKDPEAPIFQVADYGIVADLFK Unmodified 2946.5743 0.57426095 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 1 10 1.87 1 1 1 1 100.47 100.47 4 2.1358E-23 35718 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.565 87.358 39.701 39.368 0 0 37.705 63.153 37 37 0 0 37 60 2 1 0 0 2 2 12887 19334 2860 18614 44673;44674;44675;44676 51737;51738;51739;51740 51737 4 TIVCQESELPDELLYGR Unmodified 2020.9776 0.97755658 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 0 0 0 4 0 1 76.662 76.662 3 1.8639E-08 28457 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.77 86.553 0 0 0 0 28.291 29.041 0 0 0 0 28 28 0 0 0 0 1 1 7366.5 19335 985 18615 44677 51741 51741 1 TIVFELLTR Unmodified 1090.6386 0.63864553 373 Q6PDS5;A0A2I3BPC1;Q01065;A0A2I3BR90 Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B yes no 0 0 0 0 12 0 1 83.071 83.071 2 0.044902 23010 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.032 27.946 0 67.727 85.743 0 122.93 75.376 0 65 83 0 120 74 0 1 1 0 1 1 9058.7 19336 373 18616 44678 51742 51742 1 TIVFVETK Unmodified 935.53278 0.53278348 2135 Q8BTS0;Q61656;S4R1I6 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 8.5 0.5 1 1 63.131 63.131 2 0.0096034 20029 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.802 45.645 108.36 204.99 221.04 141.81 97.564 204.02 102 203 222 139 102 194 1 2 2 1 1 2 16130 19337 2135 18617 44679;44680 51743;51744 51743 2 TIVGALIQSVK Unmodified 1127.6914 0.69140938 111 A0A0J9YTW6;B1AWN6;F7AMU5;A2ASI5;A2APX8;A2APX9;A0A0R4J1M7;F7D6J5;F7D6K4;F6U329;Q9JJV9;A0A0J9YUW5;G3X8T7;K3W4N7;Q9WTU3;Q9ER60;A0A0J9YTW4;A0A0J9YTW2;F6U9Y2 Scn2a1;Scn3a;Scn1a;Scn8a;Scn5a;Scn4a Sodium channel protein;Sodium channel protein type 5 subunit alpha;Sodium channel protein type 8 subunit alpha;Sodium channel protein type 4 subunit alpha no no 0 0 0 0 1 0 1 80.654 80.654 3 0.00049018 28097 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.659 55.935 40.638 27.052 0 29.921 36.338 28.811 38 28 0 28 37 28 1 1 0 1 1 1 2030.3 19338 111 18618 44681 51745 51745 1 TIVITSHPGQIVK Unmodified 1391.8136 0.81364979 1765 P63037 Dnaja1 DnaJ homolog subfamily A member 1 yes yes 0 0 0 0 9.5 0.5 1 1 53.236 53.236 3;4 2.8496E-11 14652 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.93 85.87 257.36 87.107 181.65 266.8 0 346.45 241 93 180 254 0 325 2 1 2 3 0 3 25095 19339 1765 18619 44682;44683 51746;51747;51748 51747 3 TIVMGASFR Unmodified 980.51134 0.51133653 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 8.5 4.39 1 1 1 1 57.016 57.016 2 0.00022584 14718 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.31 82.462 148.01 151.76 62.949 145.7 224.57 85.93 139 153 61 139 228 83 2 2 1 2 3 1 28933 19340 246 18620 44684;44685;44686;44687 51749;51750;51751;51752 51750 4 TIVQLKPR Unmodified 953.6022 0.60220045 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 1 12 0 1 47.774 47.774 3 0.012893 9460 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.732 45.412 0 135.13 0 151.85 178.59 139.88 0 127 0 142 182 136 0 1 0 1 1 1 6377.9 19341 581 18621 44688 51753 51753 1 TIVQSGGIK Unmodified 901.52328 0.52328142 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 10 2.16 1 1 1 48.23 48.23 2 0.00036149 13113 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 127.46 64.252 464.34 468.81 188.49 383.62 566.37 447.55 436 473 190 371 573 435 3 3 1 3 3 3 48630 19342 919;937 18622 44689;44690;44691 51754;51755;51756 51754 3 TIVVTTILESPYVMYK Unmodified 1856.0005 0.000523857 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 11 0 1 91.126 91.126 3 6.4242E-19 29244 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.45 73.397 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19343 565 18623 44692 51757 51757 1 TIWDGSK Unmodified 805.39702 0.39701828 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 8 0 1 54.94 54.94 2 0.027593 16250 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.253 51.806 0 246.85 0 220.88 227.3 0 0 232 0 206 227 0 0 1 0 1 1 0 27226 19344 2996 18624 44693 51758 51758 1 TIYAGNALCTVK Unmodified 1309.67 0.67002202 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 9 0 1 60.09 60.09 2 7.8805E-13 17917 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.64 90.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19345 2860 18625 44694 51759 51759 1 TIYLVSFFEGLQR Unmodified 1571.8348 0.83477916 2048 Q5H8C4;A0A286YCC3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 12 0 1 96.347 96.347 3 0.002413 27564 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.001 39.338 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1473.2 19346 2048 18626 44695 51760 51760 1 TIYTIDGLK Unmodified 1022.5648 0.56481189 102 A0A0G2JGQ6;Q9JLM8;Q80VB6 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 9 0 1 66.092 66.092 2 0.013638 20768 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.816 21.458 0 0 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 5989.1 19347 102 18627 44696 51761 51761 1 TKCDEWSIISEGK Unmodified 1551.7239 0.72390808 2797 Q921I1;E9Q035;F7BAE9 Tf;Gm20425;Trf Serotransferrin yes no 0 0 0 1 6 0 1 61.489 61.489 3 0.034624 20791 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.511 25.678 39.701 0 0 40.441 0 29.848 37 0 0 37 0 28 1 0 0 1 0 1 2606 19348 2797 18628 44697 51762 51762 1 TKDIEDVFYK Unmodified 1256.6289 0.62886871 1130 H7BX95;Q6PDM2 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 1 6.5 0.5 1 1 64.239 64.239 3 0.0044415 21139 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.728 44.598 195.67 268.86 249.24 93.063 329.93 228.3 185 269 250 93 327 223 2 2 2 1 2 2 18542 19349 1130 18629 44698;44699 51763;51764 51764 2 TKDIVNGLR Deamidation (N) 1015.5662 0.56620887 495;1565 A2AMW0;P47757 Capzb F-actin-capping protein subunit beta no no 0 1 0 1 7 0 1 45.53 45.53 3 0.053052 12449 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.223 21.698 229.59 118.4 265.48 0 213.64 266.8 216 130 253 0 213 256 1 1 1 0 1 1 14654 19350 495;1565 18630 44700 51765 51765 123 1 TKEGVLYVGSK Unmodified 1179.6499 0.6499385 1232;2788 O55042;Q91ZZ3 Snca;Sncb Alpha-synuclein;Beta-synuclein no no 0 0 0 1 9.14 3.68 1 1 1 1 1 1 1 50.731 50.731 3 2.2094E-05 14442 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.62 70.735 2360 2279 3125.1 3197.7 2902.2 4050.1 2222 2320 3087 3146 3048 3877 4 5 4 6 6 6 352900 19351 1232;2788 18631 44701;44702;44703;44704;44705;44706;44707 51766;51767;51768;51769;51770;51771;51772;51773 51767 8 TKEGVVHGVTTVAEK Unmodified 1553.8413 0.8413211 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 1 9.4 3.01 1 1 1 2 48.472 48.472 3;4 3.0213E-05 15656 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.151 63.014 866.25 460.99 1176.2 883.36 678.15 879.44 816 468 1153 884 713 840 6 2 6 6 5 4 98173 19352 1232 18632 44708;44709;44710;44711;44712 51774;51775;51776;51777;51778;51779 51774 6 TKENEEELER Unmodified 1275.5943 0.59427411 240 A0A140T8I9;E9Q3L2;A0A338P7D3 Pi4ka yes no 0 0 0 1 3 0 1 35.343 35.343 3 0.0073049 9867 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.864 37.745 69.404 0 57.3 66.054 83.784 0 65 0 56 65 83 0 1 0 1 1 1 0 4354 19353 240 18633 44713 51780 51780 1 TKEQASHLGGAVFSGAGNIAAATGLVK Unmodified 2554.3503 0.35034944 2788 Q91ZZ3 Sncb Beta-synuclein yes yes 0 0 0 1 10.4 1.22 2 3 2 1 69.968 69.968 3;4;5 1.1498E-50 20002 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 145.19 128.86 775.6 1002.2 889.55 568.56 1011.9 931.81 729 1005 876 557 1004 899 7 11 6 6 8 9 355170 19354 2788 18634 44714;44715;44716;44717;44718;44719;44720;44721 51781;51782;51783;51784;51785;51786;51787;51788;51789;51790;51791;51792;51793;51794 51792 14 TKEQLGYIVFSGPR Unmodified 1593.8515 0.85149185 986 F6RPJ9;Q9JHR7 Ide Insulin-degrading enzyme yes no 0 0 0 1 10 0 1 63.576 63.576 3 0.011507 17576 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.04 36.361 30.044 0 0 0 0 39.442 28 0 0 0 0 37 1 0 0 0 0 1 5307 19355 986 18635 44722 51795 51795 1 TKEQVTNVGGAVVTGVTAVAQK Unmodified 2156.1801 0.18009622 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 1 9.1 3.11 1 2 2 2 1 1 1 67.368 67.368 3;4;5 2.7349E-34 21330 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 137.45 104.53 573.79 806.94 1042.9 387.59 817.81 602.8 540 806 1017 380 813 576 4 6 8 4 6 5 496900 19356 1232 18636 44723;44724;44725;44726;44727;44728;44729;44730;44731;44732 51796;51797;51798;51799;51800;51801;51802;51803;51804;51805;51806;51807 51799 12 TKEQVTNVGGAVVTGVTAVAQK Deamidation (N) 2157.1641 0.1641118 1232 O55042 Snca Alpha-synuclein yes yes 0 1 0 1 8 0 1 70.276 70.276 4 1.4896E-05 23468 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.483 38.442 59.599 44.177 44.739 46.747 45.969 0 56 46 46 46 46 0 1 1 1 1 1 0 3249.3 19357 1232 18636 44733 51808 51808 335 1 TKFENLCK Unmodified 1038.5168 0.51681584 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 1 9 0 1 48.877 48.877 3 0.01295 12564 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.677 44.837 0 461.89 502.07 640.51 733.05 732.74 0 442 516 626 753 707 0 1 1 1 1 1 42963 19358 1322 18637 44734 51809 51809 1 TKFEQHTVR Unmodified 1144.5989 0.59890598 2314 Q80U63 Mfn2 Mitofusin-2 yes yes 0 0 0 1 8 0 1 32.434 32.434 4 0.0073952 5919 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.398 45.858 38.935 65.307 73.422 56.832 0 69.29 37 65 74 56 0 65 1 1 1 1 0 1 2820.9 19359 2314 18638 44735 51810 51810 1 TKGTSSFGK Unmodified 911.47125 0.47124585 3086 Q9D823 Rpl37 60S ribosomal protein L37 yes yes 0 0 0 1 10 0 1 39.043 39.043 3 0.0069708 7431 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.781 35.425 123.3 77.811 130.84 101.74 103.43 111.11 116 83 130 102 107 107 1 1 1 1 1 1 7687 19360 3086 18639 44736 51811 51811 1 TKPFPWGDGNHTLFHNPHVNPLPTGYEDE Unmodified 3315.5374 0.53737494 1545 Q9DCW5;P43024 Cox6a1 Cytochrome c oxidase subunit 6A, mitochondrial;Cytochrome c oxidase subunit 6A1, mitochondrial yes no 0 0 0 1 8 1 1 1 70.726 70.726 5 0.0016104 22304 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.448 22.355 59.255 112.01 189.38 108.85 63.051 57.897 56 112 186 111 65 56 1 2 2 2 1 1 45896 19361 1545 18640 44737;44738 51812;51813 51813 2 TKPWNYTYNPQTK Unmodified 1639.7995 0.79945628 1150 K3W4S6;V9GX26;Q9R062 Gyg;Gyg1 Glycogenin-1 yes no 0 0 0 1 10.5 0.5 1 1 53.659 53.659 3 0.0086556 12922 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.403 27.256 0 19.758 27.382 38.809 0 29.848 0 19 28 37 0 28 0 1 1 1 0 1 5011.2 19362 1150 18641 44739;44740 51814;51815 51815 2 TKPYIQVDIGGGQTK Unmodified 1603.857 0.85697116 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 9.5 0.5 1 1 56.819 56.819 3 6.6922E-08 16383 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 115.31 81.626 0 106.88 98.358 125.56 116.46 95.815 0 102 102 120 120 93 0 2 2 1 2 2 11163 19363 1419 18642 44741;44742 51816;51817 51816 2 TKQDEVNAAWQR Unmodified 1444.7059 0.70589025 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 1 7.8 2.79 1 1 1 1 1 43.889 43.889 3 2.0886E-06 12965 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.95 84.137 495.94 253.33 423.61 527.65 415.1 579.78 465 245 406 513 426 555 4 3 2 5 3 5 83974 19364 551 18643 44743;44744;44745;44746;44747 51818;51819;51820;51821;51822 51822 5 TKQELEDLTADIK Unmodified 1502.7828 0.78280317 1696 P61264 Stx1b Syntaxin-1B yes yes 0 0 0 1 6.5 0.5 1 1 69.101 69.101 3 0.00036454 24348 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.383 44.945 187.06 119.65 198.6 71.506 129.42 183.92 176 120 194 74 130 176 2 1 2 1 1 2 26619 19365 1696 18644 44748;44749 51823;51824 51823 2 TKQGVTEAAEK Unmodified 1160.6037 0.60371659 2788;3356 Q91ZZ3;Q9Z0F7 Sncb;Sncg Beta-synuclein;Gamma-synuclein no no 0 0 0 1 8.67 3.09 1 1 1 38.461 38.461 3 0.00062831 9308 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.507 33.42 48.708 164.21 291.33 82.992 191 114.44 46 162 282 83 190 111 1 3 3 1 3 2 25901 19366 2788;3356 18645 44750;44751;44752 51825;51826;51827 51826 3 TKSENGLEFTSSGSANTETTK Deamidation (N) 2188.9972 0.99716563 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 1 0 1 7 3.54 1 1 1 1 50.241 50.241 3;4 2.2366E-10 16212 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.245 62.354 366.41 231.89 257.41 159.31 250.55 105.79 344 241 254 158 250 102 3 2 2 1 3 1 31912 19367 978;2097 18646 44753;44754;44755;44756 51828;51829;51830;51831 51829 261 4 TKSENGLEFTSSGSANTETTK Unmodified 2188.0132 0.013150046 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 1 5 0 1 48.945 48.945 4 1.8896E-05 15462 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.541 38.232 0 59.584 0 70.378 35.469 0 0 56 0 65 37 0 0 1 0 1 1 0 3072.7 19368 978;2097 18646 44757 51832 51832 1 TKSNGEEPR Deamidation (N) 1017.4727 0.47270242 1643 P56564;D3YY51 Slc1a3 Excitatory amino acid transporter 1;Amino acid transporter yes no 0 1 0 1 5 0 1 26.342 26.342 3 0.014555 4871 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.424 46.22 0 43.703 58.899 76.307 56.601 77.269 0 42 60 74 60 74 0 1 1 1 1 1 17698 19369 1643 18647 44758 51833 51833 631 1 TKTPGPGAQSALR Unmodified 1282.6993 0.69934831 1716 P62264;D3YVF4;D3Z7I1 Rps14 40S ribosomal protein S14 yes no 0 0 0 1 8 0 1 36.063 36.063 3 0.0029125 7465 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.287 37.433 69.292 33.903 47.388 0 56.251 67.685 65 37 46 0 56 65 1 1 1 0 1 1 5135 19370 1716 18648 44759 51834 51834 1 TKVEAPK Unmodified 771.44905 0.44905385 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 1 7 0 1 36.84 36.84 3 0.028129 8457 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.732 3.8011 563.96 336.5 509.06 418.44 546.6 519.53 530 360 509 420 558 502 1 1 1 1 1 1 33893 19371 154 18649 44760 51835 51835 1 TLADAEGDVFR Unmodified 1192.5724 0.57241646 3170 Q9EQ20;A0A1Y7VJ32 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes no 0 0 0 0 4 0.816 1 1 1 61.356 61.356 2 5.1518E-10 21519 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.22 95.354 187.8 119.54 74.683 88.061 234.36 124.24 176 121 74 84 232 120 4 3 2 2 4 2 40482 19372 3170 18650 44761;44762;44763 51836;51837;51838;51839 51837 4 TLADVLVQEVIK Unmodified 1326.7759 0.7758673 1587 P49442;E0CYQ4;E0CX64;H3BK26 Inpp1 Inositol polyphosphate 1-phosphatase yes no 0 0 0 0 7.5 0.5 1 1 90.703 90.703 3 0.00035433 33601 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.44 40.698 96.589 36.631 0 9.6812 8.2818 20.018 94 37 0 9 9 19 2 1 0 1 1 1 5950.7 19373 1587 18651 44764;44765 51840;51841 51840 2 TLAEINANR Unmodified 1000.5302 0.53015772 539 Q3TPJ8;A2BFF9;O88487;A2BFF8;A2BFF5 Dync1i2 Cytoplasmic dynein 1 intermediate chain 2 yes no 0 0 0 0 13 0 1 44.097 44.097 2 0.010898 13398 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.267 26.398 78.421 61.995 112.31 82.641 73.608 0 74 65 111 83 74 0 1 1 1 1 1 0 5298.7 19374 539 18652 44766 51842 51842 1 TLAESALQMLYAAK Unmodified 1508.7909 0.79086543 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 11 0 1 91.181 91.181 3 0.0028411 29303 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.092 26.237 0 20.216 0 0 0 29.848 0 19 0 0 0 28 0 1 0 0 0 1 5853.2 19375 287 18653 44767 51843 51843 1 TLAFASVDLTNK Unmodified 1278.682 0.68196691 2939 Q9CQR4 Acot13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 0 10.3 2.05 1 1 1 71.983 71.983 2;3 1.3591E-22 21566 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 165.66 100.36 274.95 312.75 231.29 73.851 336.31 250.79 259 315 231 74 333 241 3 3 2 1 3 2 45927 19376 2939 18654 44768;44769;44770 51844;51845;51846 51845 3 TLAFSSIMPGYR Unmodified 1341.6751 0.67510739 498 H3BIW6;F7C3A0;A2AP18;A0A087WSR3;H3BK11;F7C512 Plch2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 yes no 0 0 0 0 12 0 1 73.796 73.796 2 0.017985 19240 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 53.028 34.766 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19377 498 18655 44771 51847 51847 1 TLAGDVHIVR Unmodified 1079.6087 0.60874239 779 D3Z645;Q9QZ88;D3YYD5;D3YW98 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 0 6 1 1 1 45.944 45.944 3 0.0027331 14080 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.103 40.58 39.406 0 49.573 0 56.948 47.411 37 0 46 0 56 46 1 0 1 0 1 1 8691.7 19378 779 18656 44772;44773 51848;51849 51848 2 TLAGNPK Unmodified 699.39154 0.39153897 2747 Q91VW3 Sh3bgrl3 SH3 domain-binding glutamic acid-rich-like protein 3 yes yes 0 0 0 0 8.75 2.49 2 1 1 38.828 38.828 2;3 0.019609 9429 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.67 53.516 841.74 333.04 534.67 702.26 542.69 771.22 789 339 540 681 571 738 5 2 3 4 3 4 106940 19379 2747 18657 44774;44775;44776;44777 51850;51851;51852;51853;51854 51850 5 TLAILQIESEK Unmodified 1243.7024 0.702368 2928 Q9CQH3;D3Z568;F6Y6V5;D3YX99;D3Z6W9 Ndufb5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial yes no 0 0 0 0 7 0 1 73.739 73.739 3 0.00068719 25659 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.488 43.079 69.229 33.727 58.219 0 56.581 58.081 65 37 56 0 56 56 1 1 1 0 1 1 6487.2 19380 2928 18658 44778 51855 51855 1 TLANLPWIVEPGQEAK Unmodified 1764.941 0.94103514 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;Q8BIZ1;S4R286;S4R2H3;S4R2N9;S4R2E3;A0A140T8U6;S4R1K4 Anks1b Ankyrin repeat and sterile alpha motif domain-containing protein 1B yes no 0 0 0 0 9.5 2.06 2 1 1 81.865 81.865 2;3;4 1.0402E-05 28210 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.9 78.797 69.745 98.485 48.135 147.09 230.66 174.18 65 93 47 139 232 166 1 2 2 3 3 3 36678 19381 3447 18659 44779;44780;44781;44782 51856;51857;51858;51859 51858 4 TLAQFPETLLGDPK Unmodified 1528.8137 0.81370936 1775 P63141 Kcna2 Potassium voltage-gated channel subfamily A member 2 yes yes 0 0 0 0 7 0 1 80.919 80.919 3 0.0060589 29025 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.926 27.602 0 57.96 33.525 68.048 53.123 67.774 0 55 37 65 56 65 0 1 1 1 1 1 3338.3 19382 1775 18660 44783 51860 51860 1 TLAQFPNTLLGNPK Unmodified 1512.83 0.83002813 1392 P16388 Kcna1 Potassium voltage-gated channel subfamily A member 1 yes yes 0 0 0 0 10.5 0.5 1 1 74.527 74.527 3 0.00091441 22044 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.409 32.777 97.732 44.32 127.75 97.678 38.771 83.108 92 46 125 97 42 79 2 1 2 2 1 1 15713 19383 1392 18661 44784;44785 51861;51862 51862 2 TLASAGGPDNLVLLDPGK Unmodified 1736.9309 0.93086439 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3 Add1 Alpha-adducin yes no 0 0 0 0 8.17 2.27 1 2 2 1 75.532 75.532 2;3;4 2.0612E-13 27460 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.31 95.505 316.24 295.72 354.94 286.09 486.26 387.52 297 296 352 278 491 371 5 4 4 3 7 4 85475 19384 3276 18662 44786;44787;44788;44789;44790;44791 51863;51864;51865;51866;51867;51868;51869 51863 7 TLASLSPETSLFIIASK Unmodified 1776.9873 0.98731663 1316 P06745 Gpi Glucose-6-phosphate isomerase yes yes 0 0 0 0 8.57 3.33 1 1 2 1 1 1 90.674 90.674 3 1.2616E-18 25792 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.84 95.681 49.236 19.566 556.63 633.96 414.54 370.31 46 19 538 615 417 355 2 1 6 7 5 3 201120 19385 1316 18663 44792;44793;44794;44795;44796;44797;44798 51870;51871;51872;51873;51874;51875;51876;51877;51878;51879;51880;51881 51881 12 TLASPNIVVILCGNK Unmodified 1597.8862 0.8861628 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B yes yes 0 0 0 0 10 0 1 80.686 80.686 3 0.0057571 25375 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.592 21.059 39.421 0 47 57.767 34.032 58.725 37 0 46 56 37 56 1 0 1 1 1 1 2120.1 19386 2785 18664 44799 51882 51882 1 TLASPNIVVILCGNKK Unmodified 1725.9811 0.98112582 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B yes yes 0 0 0 1 11 0 1 72.221 72.221 3 0.00025974 21109 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.257 59.16 0 39.368 0 0 38.702 0 0 37 0 0 37 0 0 1 0 0 1 0 2591.4 19387 2785 18665 44800 51883 51883 1 TLATDILMGVLK Unmodified 1273.7316 0.73155964 1185 O35286;A0A0G2JG10;Q497W9;A0A0G2JGQ5 Dhx15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 yes no 0 0 0 0 10.5 0.5 1 1 94.288 94.288 2 0.0056719 30481 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.167 21.81 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 2113.6 19388 1185 18666 44801;44802 51884;51885 51885 2 TLATGYEVDGGK Unmodified 1209.5877 0.58773217 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 5.5 0.5 1 1 53.483 53.483 2;3 1.6819E-11 16992 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 119.27 79.207 0 28.827 106.69 43.596 75.27 27.7 0 28 102 47 74 28 0 1 2 2 1 1 5782.1 19389 570 18667 44803;44804 51886;51887 51887 2 TLATWATK Unmodified 890.48617 0.48616764 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 10.5 1.12 1 1 1 1 59.162 59.162 2 0.0035688 15691 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.52 69.346 746.02 594.97 812.83 737.12 1110.7 481.69 701 614 806 729 1110 467 3 3 4 3 5 2 86544 19390 1798 18668 44805;44806;44807;44808 51888;51889;51890;51891;51892 51890 5 TLAVDENFLPELPR Unmodified 1612.8461 0.84607213 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 6.5 0.5 1 1 80.586 80.586 3 5.1312E-05 29646 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.262 53.345 19 0 0 0 28.62 19.437 19 0 0 0 28 19 1 0 0 0 1 1 4919.9 19391 82 18669 44809;44810 51893;51894 51893 2 TLAVITK Unmodified 744.47454 0.47454032 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 11 0 1 56.236 56.236 2 0.033776 14083 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 83.265 18.013 0 190.46 0 0 309.62 0 0 179 0 0 296 0 0 1 0 0 1 0 20644 19392 815;2590 18670 44811 51895 51895 1 TLAYIITELDER Unmodified 1435.7559 0.75586013 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 10.2 2.77 1 1 2 86.811 86.811 2;3 9.7E-15 31981 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 139.86 103.43 29.952 18.196 37.438 67.383 76.08 28.744 28 19 37 65 75 28 1 1 2 3 2 2 9145.2 19393 1648 18671 44812;44813;44814;44815 51896;51897;51898;51899 51896 4 TLAYLLPAIVHINHQPYLER Unmodified 2360.3005 0.30048612 1963 Q501J6;Q3U741;Q3TU25 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 0 0 0 12 0 1 77.901 77.901 4 0.00042653 21042 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.808 37.469 59.91 35.328 0 0 27.961 38.644 56 37 0 0 28 37 1 1 0 0 1 1 5345 19394 1963 18672 44816 51900 51900 1 TLDCEPK Unmodified 861.39022 0.39021834 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 0 0 0 0 6.5 3.1 2 1 1 1 1 41.917 41.917 2;3 0.0083965 12554 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.67 85.638 1355.4 451.25 1453.5 540.72 957.82 1358.3 1273 464 1389 550 965 1297 7 5 7 5 6 7 261520 19395 1383 18673 44817;44818;44819;44820;44821;44822 51901;51902;51903;51904;51905;51906;51907;51908 51901 8 TLDEAPK Unmodified 772.39668 0.39668393 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 5 0 1 42.911 42.911 2 0.038508 12645 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.597 20.392 48.84 25.402 65.599 66.465 35.649 0 46 28 65 65 37 0 1 1 1 1 1 0 33933 19396 1081 18674 44823 51909 51909 1 TLDGGLNVIQLETAVGAAIK Unmodified 1982.1048 0.10480601 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 5.33 3.09 1 1 1 94.052 94.052 3 0.00016209 34797 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.938 33.021 0 28.152 0 0 0 9.594 0 27 0 0 0 9 0 2 0 0 0 1 3161.5 19397 2783 18675 44824;44825;44826 51910;51911;51912 51911 3 TLDISNNR Unmodified 931.47231 0.47230849 1093 G3XA53;Q63912 Omg Oligodendrocyte-myelin glycoprotein yes no 0 0 0 0 9 4 1 1 41.385 41.385 2 0.0043865 11940 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.32 42.19 196.92 182.76 111.47 61.275 304.64 367.61 185 186 111 65 306 353 2 2 1 1 2 2 24608 19398 1093 18676 44827;44828 51913;51914 51913 2 TLDNLGYR Unmodified 950.48214 0.48214489 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 6 0 1 50.209 50.209 2 0.031071 15412 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.692 45.955 0 77.524 72.504 65.38 71.432 86.44 0 74 74 65 74 83 0 1 1 1 1 1 11182 19399 3274 18677 44829 51915 51915 1 TLDNVAIAEEEK Unmodified 1330.6616 0.6616254 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 4 0 1 58.837 58.837 3 0.050074 20503 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.292 12.688 49.302 0 9.4894 0 0 49.036 46 0 9 0 0 46 1 0 1 0 0 1 3486.2 19400 2262 18678 44830 51916 51916 1 TLDPDPAIR Unmodified 996.52401 0.52400971 3186 Q9ERK4;E9Q1T9;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 4 0 1 49.505 49.505 2 0.026549 16043 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.91 27.36 0 68.397 45.668 0 0 49.036 0 65 46 0 0 46 0 1 1 0 0 1 6490.6 19401 3186 18679 44831 51917 51917 1 TLDQVLEDVDQCCQALSQR Unmodified 2277.0365 0.0365448 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 4.5 0.5 1 1 83.486 83.486 3 2.1197E-22 31785 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.73 95.24 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2354.9 19402 1265 18680 44832;44833 51918;51919 51919 2 TLDSDYAPLQQFFVVMEHCLK Unmodified 2540.208 0.20796723 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 0 11 2 1 1 100.68 100.68 3 0.00038336 35867 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.476 35.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19403 3056 18681 44834;44835 51920;51921 51920 2 TLDVNQDSELR Unmodified 1288.6259 0.62590859 39 A0A0A0MQ90;P97352 S100a13 Protein S100-A13 yes no 0 0 0 0 4 0.816 1 1 1 49.753 49.753 2 4.3475E-08 16584 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 125.72 83.53 78.642 65.304 150.47 120.13 109.84 125.85 74 65 148 120 111 121 2 1 3 3 2 3 21608 19404 39 18682 44836;44837;44838 51922;51923;51924 51922 3 TLEAVQDLLEQGR Unmodified 1470.7678 0.7678218 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6.5 0.5 1 1 80.001 80.001 3 2.2347E-14 29438 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.69 100.82 20.387 9.576 0 50.688 36.338 58.659 19 9 0 47 37 56 1 1 0 2 1 2 10036 19405 1412 18683 44839;44840 51925;51926 51925 2 TLEDNEER Unmodified 1004.4411 0.44106794 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 0 13 0 1 31.367 31.367 2 0.0012924 7337 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 142.04 91.165 0 68.095 121.36 122.89 113.1 0 0 65 121 121 111 0 0 1 2 2 1 0 17520 19406 1579 18684 44841 51927;51928 51928 2 TLEDPDLNVR Unmodified 1170.5881 0.58806652 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 53.641 53.641 2 1.7905E-07 18092 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 141.02 93.195 177.81 151.92 169.7 229.81 202.61 241.53 167 148 167 223 204 232 2 2 2 3 2 3 55537 19407 2264 18685 44842;44843;44844;44845 51929;51930;51931;51932 51930 4 TLEEDEEELFK Unmodified 1380.6297 0.62965657 1508 P34022 Ranbp1 Ran-specific GTPase-activating protein yes yes 0 0 0 0 5 4.05 1 2 1 1 72.842 72.842 2;3 5.814E-08 27221 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 120.09 86.224 157.62 187.44 159.5 86.018 274.79 76.556 148 185 158 84 269 74 4 3 3 2 4 1 76699 19408 1508 18686 44846;44847;44848;44849;44850 51933;51934;51935;51936;51937 51934 5 TLEEEFAR Unmodified 993.47673 0.47672516 1225 O54988 Slk STE20-like serine/threonine-protein kinase yes yes 0 0 0 0 3 0 1 52.253 52.253 2 0.021985 17702 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.072 23.317 0 38.922 26.7 28.309 37.402 0 0 37 28 28 37 0 0 1 1 1 1 0 6584 19409 1225 18687 44851 51938 51938 1 TLEELYLDANQIEELPK Unmodified 2017.0256 0.025552634 82;623 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7;B2RUJ2;B7ZNX6;Q80TH2 Lrrc7;Erbb2ip Leucine-rich repeat-containing protein 7;Protein LAP2 no no 0 0 0 0 5.33 0.471 2 1 89.347 89.347 3;4 0.015552 34160 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.193 26.444 19 18.866 17.103 27.867 33.238 0 19 18 18 27 33 0 1 2 2 2 2 0 2850.9 19410 82;623 18688 44852;44853;44854 51939;51940;51941 51940 3 TLEEMELR Unmodified 1019.4957 0.49574604 2249;1027 Q6PH08;Q3UHT7;A0A1B0GS69;V9GWT6;V9GXH3;V9GXF0;V9GXP8;F8VPM7;Q99MI1 Erc2;Erc1 ERC protein 2;ELKS/Rab6-interacting/CAST family member 1 no no 0 0 0 0 4 0 1 55.933 55.933 2 0.026664 19084 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.301 34.977 48.876 44.931 42.938 87.361 42.461 47.824 46 46 46 83 46 46 1 1 1 1 1 1 4948.3 19411 2249;1027 18689 44855 51942 51942 1 TLEGELHDLR Unmodified 1181.6041 0.60405094 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 6.67 4.5 1 1 1 50.664 50.664 3 1.2887E-05 17254 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.62 68.326 88.148 126.96 84.504 0 73.412 116.23 83 129 83 0 74 111 1 2 1 0 1 1 15813 19412 1580 18690 44856;44857;44858 51943;51944;51945 51943 3 TLEIEACR Unmodified 990.48043 0.48043033 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 7.67 3.86 1 1 1 47.723 47.723 2 0.0026675 15361 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 127.02 75.449 218.05 304.01 337.17 76.63 274.78 410.03 204 296 332 74 270 392 2 2 2 1 1 3 71902 19413 1329 18691 44859;44860;44861 51946;51947;51948 51946 3 TLELLVNAIAINSAYTTK Unmodified 1934.0724 0.072443247 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 8.71 4.92 2 2 2 1 97.761 97.761 3;4 2.4822E-26 27880 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 137.45 110.42 68.102 49.991 109.36 87.712 59.59 122.21 64 48 104 84 60 116 5 4 6 6 4 7 42453 19414 1042 18692 44862;44863;44864;44865;44866;44867;44868 51949;51950;51951;51952;51953;51954;51955;51956;51957;51958 51957 10 TLENELDELDPDNALLPAGLR Unmodified 2307.1594 0.15942035 1590 P49813 Tmod1 Tropomodulin-1 yes yes 0 0 0 0 4 0 1 90.905 90.905 3 5.5635E-11 33875 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 90.968 75.546 0 0 2.9617 6.3815 0 3.198 0 0 3 6 0 3 0 0 1 1 0 1 958.1 19415 1590 18693 44869 51959 51959 1 TLENVEVNGEKPAK Deamidation (N) 1527.7781 0.77805214 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 1 0 1 8 3.56 1 1 1 51.418 51.418 3 0.00016545 16889 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.771 52.122 59.327 161.09 180.82 210.7 79.481 185.35 56 158 185 204 83 176 1 3 3 3 1 3 14918 19416 2952 18694 44870;44871;44872 51960;51961;51962 51960 1032 3 TLEQHDNIVTHYK Unmodified 1596.7896 0.78961988 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 6 0 1 44.398 44.398 4 0.0053719 12673 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.12 29.282 59.628 0 77.333 54.639 104.18 0 56 0 74 56 102 0 1 0 1 1 1 0 3141.2 19417 3387 18695 44873 51963 51963 1 TLEQQENFEEVAR Unmodified 1591.7478 0.74781464 3450;8 A0A087WNU5;S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812;S4R236;G3X971;S4R2J6;S4R165;S4R187;S4R1X7;S4R2C1;S4R2F5 Ank3 Ankyrin-3 no no 0 0 0 0 2.5 0.5 1 1 53.506 53.506 2;3 3.332E-13 18210 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 126.34 100.3 30.044 9.2416 20.004 19.859 76.54 29.041 28 9 19 19 75 28 1 1 1 1 2 1 9270.3 19418 8;3450 18696 44874;44875 51964;51965 51965 2 TLEQQENFSEVAR Unmodified 1549.7372 0.73724996 3449;3451 S4R2F3;Q8C8R3;S4R1M4;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 6.67 4.5 1 1 1 51.727 51.727 2 9.1579E-24 17083 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 169.57 129.22 0 0 37.941 96.249 108.77 115.22 0 0 37 92 112 111 0 0 1 2 2 2 19845 19419 3449;3451 18697 44876;44877;44878 51966;51967;51968 51967 3 TLESIMACCLSEEAK Acetyl (Protein N-term) 1782.7838 0.7838075 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 1 0 0 0 8.5 4.5 1 1 91.678 91.678 3 6.4704E-05 33970 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.128 35.159 5.365 0 0 0 4.0049 5.2157 5 0 0 0 4 5 1 0 0 0 1 1 881.22 19420 1428 18698 44879;44880 51969;51970 51969 2 TLESSIQGLR Unmodified 1102.5982 0.59823728 3303 Q9R0Q6 Arpc1a Actin-related protein 2/3 complex subunit 1A yes yes 0 0 0 0 8.8 3.49 1 1 1 2 55.611 55.611 2;3 3.5394E-05 18912 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.64 58.758 177.69 316.47 401.04 242.3 217.05 414.88 167 315 399 241 224 395 2 4 4 2 1 3 95426 19421 3303 18699 44881;44882;44883;44884;44885 51971;51972;51973;51974;51975 51975 5 TLESVDPLGGLNTIDILTAIR Unmodified 2210.2158 0.21581302 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 8.33 2.29 1 2 1 1 1 100.64 100.64 3;4 3.2655E-30 36579 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 139.51 122.78 60.964 37.955 25.882 17.772 35.617 10.463 57 39 26 17 35 10 3 4 4 2 3 2 42088 19422 815;2590 18700 44886;44887;44888;44889;44890;44891 51976;51977;51978;51979;51980;51981;51982 51977 7 TLETFLTYPMFQIPR Unmodified 1855.9542 0.95424237 1469 P27671 Rasgrf1 Ras-specific guanine nucleotide-releasing factor 1 yes yes 0 0 0 0 11 0 1 96.468 96.468 3 0.035697 31512 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 34.302 14.293 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2458.8 19423 1469 18701 44892 51983 51983 1 TLETPAAQMEGFLNR Unmodified 1676.8192 0.81920545 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 73.936 73.936 2;3 9.3933E-26 26743 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 145.49 114.62 108.48 79.422 94.232 0 84.191 115.92 102 83 92 0 83 111 2 2 2 0 1 2 25071 19424 2148 18702 44893;44894;44895 51984;51985;51986 51984 3 TLETVPLER Unmodified 1056.5815 0.58152458 1271 O88569 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes yes 0 0 0 0 5 0 1 53.803 53.803 2 0.00011731 17780 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.21 73.531 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19425 1271 18703 44896 51987 51987 1 TLFANTGGTVK Unmodified 1107.5924 0.59242362 2780 Q91Z31 Ptbp2 Polypyrimidine tract-binding protein 2 yes yes 0 0 0 0 9 0 1 56.754 56.754 3 0.005222 16487 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.023 19.328 69.372 74.058 0 79.309 141.75 0 65 74 0 75 139 0 1 1 0 1 1 0 84048 19426 2780 18704 44897 51988 51988 1 TLFCASAPVTLPPWLK Unmodified 1799.9644 0.96441312 2378 Q8BGF0 AW551984 yes yes 0 0 0 0 12 0 1 91.708 91.708 3 0.00057856 26150 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.186 33.935 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19427 2378 18705 44898 51989 51989 1 TLFLAVR Unmodified 818.50142 0.50142377 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 8.67 5.44 1 1 1 64.254 64.254 2 0.027103 21850 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 94.401 51.355 69.27 242.18 0 69.472 297.01 0 65 232 0 65 287 0 1 2 0 1 2 0 63945 19428 2420 18706 44899;44900;44901 51990;51991;51992 51990 3 TLFPGQGNNSYVFPGVALGVVACGLR Unmodified 2692.3795 0.37954108 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 11.5 0.5 1 1 95.631 95.631 3;4 0.0071169 31084 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 33.302 23.897 0 14.896 19.685 19.594 13.962 19.856 0 14 19 19 14 19 0 1 1 1 1 1 8653.6 19429 1317 18707 44902;44903 51993;51994 51993 2 TLFQLLR Unmodified 889.53854 0.53853756 1339 P0DN34 yes yes 0 0 0 0 1 0 1 75.806 75.806 2 0.0053865 26108 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.12 54.671 240.94 184.32 286.51 263.76 178.04 188.93 227 193 287 260 188 182 1 1 1 1 1 1 54402 19430 1339 18708 44904 51995 51995 1 TLFSNIVLSGGSTLFK Unmodified 1682.9243 0.92432245 2672;1691 P61164;Q8R5C5 Actr1a;Actr1b Alpha-centractin;Beta-centractin no no 0 0 0 0 6.75 5.76 2 1 1 93.173 93.173 3 4.241E-33 33336 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.64 125.97 161.86 126.57 152.1 112.18 194.75 178.39 152 126 149 109 195 170 8 6 7 6 6 8 54450 19431 1691;2672 18709 44905;44906;44907;44908 51996;51997;51998;51999;52000;52001;52002;52003;52004;52005;52006 52001 11 TLFSSQIEELNLPK Unmodified 1617.8614 0.86138784 174 A0A0R4J0I1 yes yes 0 0 0 0 8 0 1 80.362 80.362 3 0.0024151 28240 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.643 29.77 29.749 0 49.622 0 0 0 28 0 46 0 0 0 1 0 1 0 0 0 3956.4 19432 174 18710 44909 52007 52007 1 TLFSVLPGLK Unmodified 1073.6485 0.64848194 386 A0A2K6EDJ7;E9Q5L2;E9PVD2;A6X935 Itih4 Inter alpha-trypsin inhibitor, heavy chain 4 yes no 0 0 0 0 1 0 1 84.863 84.863 3 0.0025072 29916 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.463 38.906 0 19.929 17.19 48.764 26.048 29.105 0 19 19 46 28 28 0 1 1 1 1 1 1306.4 19433 386 18711 44910 52008 52008 1 TLFVTEK Unmodified 836.46437 0.46436956 2450 Q925N0;Q8BRQ9;D3YXH5 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 10 2.16 1 1 1 58.864 58.864 2 0.02936 17482 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.794 47.251 441.18 331.34 231 276.55 341.29 413.46 414 343 231 264 352 397 3 3 2 2 3 3 35308 19434 2450 18712 44911;44912;44913 52009;52010;52011 52010 3 TLGAGAFGK Unmodified 820.4443 0.44430282 1314 P05532;P09581 Kit;Csf1r Mast/stem cell growth factor receptor Kit;Macrophage colony-stimulating factor 1 receptor yes no 0 0 0 0 9 0 1 55.478 55.478 2 0.026549 15791 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.91 25.81 0 77.475 75.42 0 0 0 0 74 74 0 0 0 0 1 1 0 0 0 5760.3 19435 1314 18713 44914 52012 52012 1 TLGECGFTSQTAR Unmodified 1426.6511 0.65107749 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 6 0 1 48.07 48.07 2 0.0032238 14416 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.5 46.258 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19436 1749 18714 44915 52013 52013 1 TLGECGFTSQTARPQAPATVGLAFR Unmodified 2635.3177 0.3176691 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 1 8.5 0.5 1 1 64.528 64.528 4 1.3736E-20 20712 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.659 62.766 39.349 59.584 59.187 27.076 38.702 39.442 37 56 56 28 37 37 1 1 1 1 1 1 11051 19437 1749 18715 44916;44917 52014;52015 52014 2 TLGEEVTR Unmodified 903.46616 0.46616048 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 3.5 0.5 1 1 40.161 40.161 2 0.017191 11538 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.438 34.068 69.745 67.586 94.147 135.3 62.513 185.83 65 65 93 130 65 176 1 1 1 2 1 2 42966 19438 2186 18716 44918;44919 52016;52017 52017 2 TLGGEKFPLIEQTYYPNHR Unmodified 2262.1433 0.14331678 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 8.5 0.5 1 1 63.827 63.827 4 8.1337E-08 20373 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.413 87.79 363.68 312.24 423.32 442.01 245.28 514.27 342 315 422 427 260 489 3 3 3 3 2 3 69462 19439 2173 18717 44920;44921 52018;52019;52020;52021 52019 4 TLGGGGGGGSGGR Unmodified 988.46862 0.46862009 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6;B1AQX8;A0A140LHX7 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 26.31 26.31 2 1.5498E-10 4077 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.45 79.124 36.344 46.998 33.445 22.695 13.705 48.929 34 47 32 21 14 48 2 3 1 2 1 3 9843.6 19440 573 18718 44922;44923;44924;44925;44926 52022;52023;52024;52025;52026 52024 5 TLGIISQASTPR Unmodified 1242.6932 0.6932003 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 10 0.816 1 1 1 56.212 56.212 2 0.00012671 14293 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.247 55.8 99.464 47.174 49.63 108 27.956 163.1 93 47 51 102 28 153 2 2 2 3 1 2 39602 19441 3344 18719 44927;44928;44929 52027;52028;52029 52028 3 TLGILGLGR Unmodified 898.56 0.56000128 2138 Q61753;F6ZSB7 Phgdh D-3-phosphoglycerate dehydrogenase yes no 0 0 0 0 8.5 4.39 1 1 1 1 69.521 69.521 2 0.00019154 20346 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 131.03 79.696 296.67 235.2 72.967 148 193.51 0 278 241 74 148 185 0 2 2 1 1 1 0 225350 19442 2138 18720 44930;44931;44932;44933 52030;52031;52032;52033 52031 4 TLGISPFHEFADVVFTANDSGHR Unmodified 2516.2084 0.20843623 1319 P07309 Ttr Transthyretin yes yes 0 0 0 0 8 0 1 78.316 78.316 4 0.0052936 27279 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34.685 20.523 88.74 63.176 0 90.719 0 69.29 83 65 0 83 0 65 1 1 0 1 0 1 4040 19443 1319 18721 44934 52034 52034 1 TLGLAGK Unmodified 658.40138 0.40137537 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 10 0 1 51.561 51.561 2 0.027706 12228 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.473 42.686 54.09 44.142 69.059 60.104 72.334 67.226 51 46 69 60 74 65 1 1 1 1 1 1 9768 19444 2499 18722 44935 52035 52035 1 TLGQWIAENPDCLGSK Unmodified 1787.8512 0.85123386 2822 Q924M7;F6Q3K8 Mpi Mannose-6-phosphate isomerase yes no 0 0 0 0 7 0 1 73.561 73.561 3 2.9063E-06 25589 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.311 64.382 0 0 0 0 46.477 47.71 0 0 0 0 46 46 0 0 0 0 1 1 6958.9 19445 2822 18723 44936 52036 52036 1 TLGTAAAGPELAELQEMWK Unmodified 2015.0034 0.0033774035 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6.67 0.471 1 2 88.162 88.162 3;4 1.1685E-07 33173 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.479 68.991 0 20.216 39.558 30.604 0 29.848 0 19 38 28 0 28 0 1 2 1 0 2 9522.1 19446 2186 18724 44937;44938;44939 52037;52038;52039 52037 3 TLGTGSFGR Unmodified 894.45593 0.45593014 1310;1793 P05132;P68181;H6TMF5 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 8 0 1 45.883 45.883 2 0.0027847 11951 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.467 51.239 197.93 114.33 0 0 0 127.92 185 120 0 0 0 120 1 1 0 0 0 1 27260 19447 1310;1793 18725 44940 52040 52040 1 TLHNLVIQYASQGR Unmodified 1598.8529 0.85288884 923;717 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447;Q91YS4;D3YXZ3;O88448 Klc1;Klc2 Kinesin light chain 1;Kinesin light chain 2 no no 0 0 0 0 8 4.97 1 1 1 57.665 57.665 2;3 8.6056E-18 13031 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.64 92.312 20.091 0 49.671 0 28.62 19.437 19 0 46 0 28 19 1 0 1 0 1 1 1744.3 19448 923;717 18726 44941;44942;44943 52041;52042;52043 52043 3 TLHSDNEGSVIDDSR Unmodified 1643.7387 0.73870652 1169 O08915;D3YW40 Aip AH receptor-interacting protein yes no 0 0 0 0 3 0 1 38.848 38.848 3 1.3653E-05 11554 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.361 68.445 0 0 30.296 0 37.714 28.772 0 0 28 0 37 28 0 0 1 0 1 1 4617.6 19449 1169 18727 44944 52044 52044 1 TLHVEEVVPSVIEPSFGLGR Unmodified 2164.1528 0.15281883 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 0 6 0 1 77.577 77.577 3 9.2972E-07 28364 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.767 45.083 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 4237.6 19450 3002 18728 44945 52045 52045 1 TLIDFVK Unmodified 834.48511 0.485105 1569 P47867 Scg3 Secretogranin-3 yes yes 0 0 0 0 9 0 1 72.765 72.765 2 0.04914 23970 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.774 33.774 0 88.312 0 0 162.74 104.09 0 83 0 0 159 102 0 1 0 0 1 1 5383.5 19451 1569 18729 44946 52046 52046 1 TLIDVLQPLIAEHQAR Unmodified 1816.0207 0.020682448 1506 P32921 Wars Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS yes yes 0 0 0 0 10.8 1.48 1 1 1 1 82.68 82.68 3 8.0853E-06 25850 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.151 63.524 29.761 97.736 47.538 126.8 118.46 116.25 28 93 46 120 120 111 1 3 1 3 3 3 25728 19452 1506 18730 44947;44948;44949;44950 52047;52048;52049;52050;52051 52050 5 TLIEAGLPQK Unmodified 1068.6179 0.61791009 2719 Q8VHM5;A2AW41;V9GWW3;A2AW40 Hnrnpr yes no 0 0 0 0 8.5 0.5 1 1 62.576 62.576 3 0.0022613 19784 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.297 16.359 49.358 0 0 0 94.991 66.579 46 0 0 0 93 65 1 0 0 0 1 1 3849.4 19453 2719 18731 44951;44952 52052;52053 52052 2 TLIEFLLR Unmodified 1003.6066 0.60661712 2904 Q9CPY7 Lap3 Cytosol aminopeptidase yes yes 0 0 0 0 12 0 1 89.78 89.78 2 0.011407 25631 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.561 27.474 0 194.71 0 0 196.23 194.81 0 183 0 0 194 188 0 1 0 0 1 1 25261 19454 2904 18732 44953 52054 52054 1 TLIEILATR Unmodified 1028.623 0.62299547 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 11.3 1.25 1 1 1 76.933 76.933 2 0.0040307 23189 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.136 43.933 206.6 111.04 419.6 293.44 269.84 330.22 194 111 407 296 278 317 2 2 3 3 2 3 98448 19455 1050;1380 18733 44954;44955;44956 52055;52056;52057 52056 3 TLIEPFTLLASK Unmodified 1331.7701 0.77005364 2529 Q8CEC5 Nkiras1 NF-kappa-B inhibitor-interacting Ras-like protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 88.813 88.813 2 0.0001545 28766 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.653 58.432 29.923 0 20.407 0 9.414 0 28 0 19 0 9 0 1 0 1 0 1 0 3112.3 19456 2529 18734 44957;44958 52058;52059 52058 2 TLIINLPGSK Unmodified 1054.6386 0.63864553 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 11 0.816 1 1 1 70.62 70.62 2;3 0.0018555 20310 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.441 68.654 198.91 35.328 56 0 48.116 0 195 37 56 0 46 0 2 1 1 0 1 0 56353 19457 416 18735 44959;44960;44961 52060;52061;52062 52061 3 TLINELVK Unmodified 928.55933 0.55933258 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 0 1 69.189 69.189 2 0.0085286 22912 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.61 22.37 118.51 0 100.03 0 140.77 134.56 111 0 93 0 139 130 1 0 1 0 1 1 11490 19458 3204 18736 44962 52063 52063 1 TLINILTER Unmodified 1071.6288 0.62880913 1202 O35639;Q3TET3;A0A0G2JGL7 Anxa3 Annexin A3;Annexin yes no 0 0 0 0 10 0 1 73.995 73.995 2 0.0053647 22367 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.197 41.119 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19459 1202 18737 44963 52064 52064 1 TLIQNCGASTIR Unmodified 1332.682 0.68198369 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 8.5 0.5 1 1 47.895 47.895 2 1.6413E-11 12113 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.43 56.01 39.532 0 28.37 59.517 0 63.96 37 0 28 56 0 60 1 0 1 2 0 2 12422 19460 1827 18738 44964;44965 52065;52066 52066 2 TLLAGDTQK Unmodified 945.51311 0.51311067 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 7 0 1 50.33 50.33 2 0.0037982 14648 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.948 34.399 0 0 29.032 28.372 26.656 38.681 0 0 28 28 28 37 0 0 1 1 1 1 1765.4 19461 581 18739 44966 52067 52067 1 TLLALFTDHQWVAPAVATAK Unmodified 2152.1681 0.16807497 2191 Q69ZK9 Nlgn2 Neuroligin-2 yes yes 0 0 0 0 8 4.97 1 1 1 88.265 88.265 3;4 4.3519E-08 24921 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.414 44.824 29.904 27.776 66.082 27.242 96.027 0 28 28 65 28 93 0 1 1 2 1 2 0 9258.7 19462 2191 18740 44967;44968;44969 52068;52069;52070;52071 52070 4 TLLAVTRPFISSK Unmodified 1431.8449 0.84494991 1003 F6VF29;Q91VL0;G5E8U9;O54940 Bnip2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 yes no 0 0 0 1 1 0 1 67.447 67.447 3 0.0034242 22669 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 60.937 0 78.709 0 116.41 73.944 0 88.478 74 0 111 74 0 83 1 0 1 1 0 1 10205 19463 1003 18741 44970 52072 52072 1 TLLDIDNTR Unmodified 1059.556 0.55603811 661 CON__P35527 yes yes 0 0 0 0 6 0 1 58.742 58.742 2 0.0029497 19555 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.732 36.073 429.14 419.11 376 370.49 379.49 332.86 404 427 388 366 390 317 2 2 2 2 2 1 15347 + 19464 661 18742 44971 52073;52074 52074 2 TLLEGEESR Unmodified 1032.5088 0.50875357 657 CON__P04264 no no 0 0 0 0 6.25 3.96 1 1 1 1 44.859 44.859 2 3.3613E-05 13937 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.1 32.53 517.43 393.63 397.95 353.87 128.63 481.36 486 409 400 343 139 455 3 4 3 3 2 3 96094 + 19465 657 18743 44972;44973;44974;44975 52075;52076;52077;52078 52076 4 TLLEGSGLESIINIIHSSLAEPR Unmodified 2448.3224 0.32240336 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 11 0 1 101.48 101.48 3 1.8158E-06 33695 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.228 38.922 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 4801.9 19466 1412 18744 44976 52079;52080 52080 2 TLLEILDGK Unmodified 1000.5805 0.58046195 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 9 0.816 1 1 1 84.153 84.153 3 0.0018578 30041 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.064 35.712 39.044 38.603 45.79 68 16.818 78.404 37 37 46 65 19 74 2 1 1 2 1 2 11434 19467 3402 18745 44977;44978;44979 52081;52082;52083 52081 3 TLLELIPELR Unmodified 1195.7176 0.71762413 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 9 0 1 89.822 89.822 2 0.012289 31752 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.184 34.097 0 29.792 0 40.441 0 0 0 28 0 37 0 0 0 1 0 1 0 0 3431.9 19468 2235 18746 44980 52084 52084 1 TLLENTAITIGR Unmodified 1300.7351 0.73506511 2863;2365 Q99LG2;Q8BFY9;Q3TKD0 Tnpo2;Tnpo1 Transportin-2;Transportin-1 no no 0 0 0 0 9 0 1 66.992 66.992 2 0.0019798 21235 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.879 31.323 0 38.609 45.384 46.512 56.439 0 0 37 46 46 56 0 0 1 1 1 1 0 4039.8 19469 2863;2365 18747 44981 52085 52085 1 TLLFTFNVPGSGNTYPK Unmodified 1854.9516 0.95159983 579 B1AR93;F7C265;Q9D024 Ccdc47 Coiled-coil domain-containing protein 47 yes no 0 0 0 0 12 0 1 83.831 83.831 3 0.00020237 23223 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.851 39.363 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 5499.3 19470 579 18748 44982 52086 52086 1 TLLHHAVSTGSK Unmodified 1249.6779 0.67788459 466 A2AHK0;A2AHJ7;Q80UP3 Dgkz Diacylglycerol kinase;Diacylglycerol kinase zeta yes no 0 0 0 0 11 0 1 36.41 36.41 4 0.01293 6386 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.616 17.501 0 78.736 0 0 0 88.478 0 74 0 0 0 83 0 1 0 0 0 1 2478.3 19471 466 18749 44983 52087 52087 1 TLLISTLHR Unmodified 1052.6342 0.63422886 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 12 0 1 53.207 53.207 3 2.2113E-05 11484 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 120.31 92.132 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19472 175 18750 44984 52088 52088 1 TLLLLSSVPK Unmodified 1069.6747 0.67469669 819 E9PYV1;E9PUR6;P06537 Nr3c1 Glucocorticoid receptor yes no 0 0 0 0 1 0 1 77.383 77.383 2 0.0049822 26870 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 76.679 40.483 0 0 0 0 28.987 8.7668 0 0 0 0 28 9 0 0 0 0 1 1 943.73 19473 819 18751 44985 52089 52089 1 TLLLQAK Unmodified 785.50109 0.50108942 824 E9PV21;G3X8X1;Q8VE09 Ttc39c Tetratricopeptide repeat protein 39C yes no 0 0 0 0 11.5 0.5 1 1 58.936 58.936 2 0.033663 13869 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.451 13.571 0 108.53 0 0 0 148.17 0 102 0 0 0 139 0 1 0 0 0 1 13340 19474 824 18752 44986;44987 52090;52091 52091 2 TLLLSLLATEIER Unmodified 1470.8657 0.86574494 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 11.7 0.471 1 2 98.651 98.651 2;3 3.6193E-18 28152 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 144.1 102.91 0 0 39.621 9.2813 0 29.848 0 0 37 9 0 28 0 0 2 1 0 1 8407.6 19475 240 18753 44988;44989;44990 52092;52093;52094 52093 3 TLLPVPGYK Unmodified 986.58007 0.58006802 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 10.5 0.5 1 1 67.863 67.863 2 0.0043223 18994 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.181 36.115 128.96 63.609 93.206 175.83 60.908 185.88 121 65 93 167 65 176 2 1 1 2 1 2 10388 19476 3383 18754 44991;44992 52095;52096 52096 2 TLLQGSGCLAGIYLEDSK Unmodified 1923.9612 0.96117824 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 79.476 79.476 3 0.00039798 27784 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.668 29.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19477 3266 18755 44993 52097 52097 1 TLLSDLVAQYVAK Unmodified 1419.7973 0.79733102 2561 Q8CJH3 Plxnb1 Plexin-B1 yes yes 0 0 0 0 12 0 1 92.998 92.998 3 0.00069031 26655 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.827 42.629 39.58 0 20.358 0 28.291 29.041 37 0 19 0 28 28 1 0 1 0 1 1 1240.4 19478 2561 18756 44994 52098 52098 1 TLLTGLLDLQAQYPQFISR Unmodified 2176.1892 0.18920434 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 8.17 5.11 2 2 1 1 99.005 99.005 3 4.7679E-97 32313 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 182.49 159.83 23.33 11.332 57.059 2.0928 45.508 26.509 22 11 53 2 45 25 2 3 4 1 5 3 72653 19479 1702 18757 44995;44996;44997;44998;44999;45000 52099;52100;52101;52102;52103;52104;52105;52106;52107;52108 52103 10 TLMALGSLAVTK Unmodified 1203.6897 0.68969482 1531 P37804 Tagln Transgelin yes yes 0 0 0 0 6.5 5.5 1 1 77.515 77.515 2;3 0.0001159 27026 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.866 36.303 39.489 19.256 19.355 71.045 37.714 28.772 37 19 19 65 37 28 2 1 1 1 1 1 12691 19480 1531 18758 45001;45002 52109;52110 52109 2 TLMALGSVAVTK Unmodified 1189.674 0.67404476 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 8.5 4.39 1 1 1 1 71.564 71.564 3 2.6353E-08 21325 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.6 74.058 399.25 308.63 223.02 281.86 160.56 232.07 374 315 213 261 158 222 5 5 4 3 3 5 99445 19481 3315 18759 45003;45004;45005;45006 52111;52112;52113;52114;52115;52116 52113 6 TLMAQSIYGGR Unmodified 1195.6019 0.60194245 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10.5 0.5 1 1 55.805 55.805 2 5.0955E-05 14161 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.34 51.492 59.326 73.639 65.613 0 45.451 77.587 56 74 65 0 46 74 1 1 1 0 1 1 13928 19482 3204 18760 45007;45008 52117;52118 52117 2 TLMNLGGLAVAR Unmodified 1214.6805 0.68052712 3349 Q9WVA4 Tagln2 Transgelin-2 yes yes 0 0 0 0 11 0 1 70.884 70.884 2 1.7374E-05 20465 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.48 57.674 69.032 63.399 66.178 0 65.015 86.623 65 65 65 0 65 83 1 1 1 0 1 1 11663 19483 3349 18761 45009 52119 52119 1 TLMSPLGITR Unmodified 1087.606 0.6059652 1871;1434;43 A0A0R4J0X5;A0A0A0MQA3;P07758;Q00896;P22599;Q00897 Serpina1a;Serpina1c;Serpina1b;Serpina1d Alpha-1-antitrypsin 1-1;Alpha-1-antitrypsin 1-3;Alpha-1-antitrypsin 1-2;Alpha-1-antitrypsin 1-4 no no 0 0 0 0 10 0 1 64.843 64.843 2 3.5488E-05 18105 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.181 56.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19484 43;1434;1871 18762 45010 52120 52120 1 TLNAEEDF Unmodified 937.40289 0.40289152 2430 Q8BLY2 Tarsl2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 0 0 0 0 2.5 0.5 1 1 62.869 62.869 2 0.026958 22536 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.127 55.397 20.387 0 9.3245 9.2813 0 9.594 19 0 9 9 0 9 1 0 1 1 0 1 6154.4 19485 2430 18763 45011;45012 52121;52122 52122 2 TLNDELEIIEGMK Unmodified 1503.7491 0.7490602 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 7.33 4.03 1 1 1 85.191 85.191 2;3 7.021E-05 33276 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.09 61.815 238.65 106.71 14.997 39.57 130.16 115.93 223 111 14 37 129 111 4 2 1 1 2 2 35776 19486 1766 18764 45013;45014;45015 52123;52124;52125;52126 52126 4 TLNDELEIIEGMK Deamidation (N) 1504.7331 0.73307578 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 0 4 0 1 85.517 85.517 3 0.035037 32505 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.03 22.367 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19487 1766 18764 45016 52127 52127 699 1 TLNEADCATVPPAIR Unmodified 1626.8036 0.80355538 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 5 0 1 55.469 55.469 3 0.0010594 18770 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.859 40.042 128.11 129.68 30.296 268.78 237.71 240.53 120 130 28 250 245 232 1 1 1 1 1 2 4826.1 19488 2597 18765 45017 52128;52129 52129 2 TLNFNEEGDAEEAMVDNWRPAQPLK Unmodified 2873.329 0.32902165 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 1 9 4 1 1 75.028 75.028 3;4 1.8883E-23 28466 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.58 85.205 0 0 0 0 185 0 0 0 0 0 185 0 0 0 0 0 1 0 16981 19489 1296 18766 45018;45019 52130;52131 52131 2 TLNLAGNFLESLSGLHK Unmodified 1812.9734 0.9733979 2305 Q80TM9;F6ZL69 Nisch Nischarin yes no 0 0 0 0 11 0 1 87.164 87.164 3 0.0003612 27758 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.424 29.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19490 2305 18767 45020 52132 52132 1 TLNPAFNETFTFK Unmodified 1528.7562 0.75619449 223 A0A0R4J2C2;P46097 Syt2 Synaptotagmin-2 yes no 0 0 0 0 8.5 0.5 1 1 76.1 76.1 3 0.00013706 25481 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.156 44.18 69.168 106.06 244.86 206.4 105.42 135.57 65 102 241 204 111 130 1 1 2 2 1 1 9334.6 19491 223 18768 45021;45022 52133;52134 52134 2 TLNPEFNEEFFYDIK Unmodified 1904.8832 0.88324549 1561 P47708 Rph3a Rabphilin-3A yes yes 0 0 0 0 9 4 1 1 85.582 85.582 3 2.0949E-05 32662 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.39 83.809 29.642 0 107.67 77.944 0 138.58 28 0 102 75 0 130 1 0 2 2 0 3 14943 19492 1561 18769 45023;45024 52135;52136;52137 52135 3 TLNPIFNETFQFSVPLAELAQR Unmodified 2534.3169 0.31692405 1090 G3X9Y1;O35681 Syt3 Synaptotagmin-3 yes no 0 0 0 0 9 0 2 100.22 100.22 3;4 0.0031366 35748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 39.818 30.16 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 2563.4 19493 1090 18770 45025;45026 52138;52139 52139 2 TLNPVFNEQFTFK Unmodified 1583.7984 0.79839365 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 9.88 1.45 1 3 2 1 1 78.411 78.411 2;3;4 1.2866E-15 27399 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.37 95.49 589.41 439.33 420.21 508.29 333.92 623.11 556 445 417 491 344 592 8 7 5 7 5 7 339920 19494 1553 18771 45027;45028;45029;45030;45031;45032;45033;45034 52140;52141;52142;52143;52144;52145;52146;52147;52148;52149 52141 10 TLNQLGTPQDSPELR Unmodified 1667.8479 0.84786304 1254 Q8BH40;O70439 Stx7 Syntaxin-7 yes no 0 0 0 0 5 0 1 56.409 56.409 3 4.7516E-05 19007 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.751 65.208 0 38.647 43.125 0 33.472 0 0 37 42 0 32 0 0 1 1 0 1 0 4704.5 19495 1254 18772 45035 52150 52150 1 TLNSAANK Unmodified 817.42938 0.42938104 3056 Q9D394 Rufy3 Protein RUFY3 yes yes 0 0 0 0 8 0 1 36.983 36.983 2 0.01236 7863 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.698 34.194 69.032 63.399 66.178 0 154.81 0 65 65 65 0 148 0 1 1 1 0 1 0 6245.1 19496 3056 18773 45036 52151 52151 1 TLNVKPLVTHR Unmodified 1276.7616 0.76155464 2176 Q64442 Sord Sorbitol dehydrogenase yes yes 0 0 0 1 12 0 1 46.248 46.248 4 0.023328 8844 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.189 29.325 211.06 277.3 0 220.51 421.52 345.08 198 274 0 209 424 335 1 1 0 1 1 1 4928.7 19497 2176 18774 45037 52152 52152 1 TLPALVWHR Unmodified 1091.624 0.62399852 679 D3YUG1;Q3TH34;Q9D8N2 Fam45a Protein FAM45A yes no 0 0 0 0 11.5 0.5 1 1 60.178 60.178 3 0.0035784 14335 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.621 42.286 0 68.836 19.365 30.604 19.874 0 0 65 19 28 19 0 0 2 1 1 1 0 6072.1 19498 679 18775 45038;45039 52153;52154 52154 2 TLPFYKDYFNVPYPLPK Unmodified 2101.0925 0.092450407 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F7ANF4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 11 0 1 84.384 84.384 4 0.027575 26467 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 36.029 19.722 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2274.7 19499 1899 18776 45040 52155 52155 1 TLPGWNTDISNAR Unmodified 1443.7106 0.71064128 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 8 0 1 62.266 62.266 2 1.0328E-10 19622 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.03 85.861 29.749 0 49.622 0 0 29.848 28 0 46 0 0 28 1 0 1 0 0 1 4869.1 19500 1558 18777 45041 52156 52156 1 TLPKPHLEAIVENLR Unmodified 1728.9887 0.98865404 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 1 9 0 2 65.724 65.724 3;4 7.3699E-05 20721 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.966 64.723 257.16 91.19 164.18 110.01 81.205 204.49 241 92 157 111 83 194 3 1 2 2 1 2 36920 19501 1357 18778 45042;45043 52157;52158;52159 52158 3 TLPSPPPEEAHLPLAGQVPSQLYAASLLQR Unmodified 3179.6979 0.69789833 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 7 0 1 80.683 80.683 4 0.0082094 28973 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.252 19.206 20.244 28.427 0 40.102 18.032 0 19 28 0 37 19 0 1 1 0 1 1 0 3415.7 19502 1275 18779 45044 52160 52160 1 TLPVYVSFVQVGK Unmodified 1435.8075 0.80750177 8 A0A087WNU5;A0A087WRU2 Ank3 yes no 0 0 0 0 11.5 0.5 1 1 80.906 80.906 3 7.1282E-05 25042 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.959 70.355 0 0 0 49.042 65.737 0 0 0 0 46 65 0 0 0 0 1 1 0 9357.6 19503 8 18780 45045;45046 52161;52162 52161 2 TLQEEAGPER Unmodified 1128.5411 0.54111633 2655 Q8R2Z5 Vwa1 von Willebrand factor A domain-containing protein 1 yes yes 0 0 0 0 2.5 0.5 1 1 36.692 36.692 2 0.0062256 10257 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 73.327 54.348 0 29.792 0 0 37.714 28.772 0 28 0 0 37 28 0 1 0 0 1 1 2518.1 19504 2655 18781 45047;45048 52163;52164 52163 2 TLQEEIDALESR Unmodified 1402.694 0.69398816 920 E9Q6U4;Q3UWL8;E9Q4Q8;E9Q8R1;Q6P0X1 Pfdn4 Prefoldin subunit 4 yes no 0 0 0 0 3 0 2 73.038 73.038 2;3 2.9474E-18 27278 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 150.49 105.72 39.504 17.243 18.48 18.954 37.831 0 37 19 19 19 37 0 1 1 1 1 1 0 15029 19505 920 18782 45049;45050 52165;52166 52166 2 TLQFTAHR Unmodified 972.51411 0.51411372 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 8.5 0.5 1 1 39.385 39.385 3 0.00050534 8584 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.46 83.692 129.11 64.479 67.042 126.38 100 194.36 121 65 65 121 102 185 2 1 1 2 1 2 30553 19506 3453 18783 45051;45052 52167;52168 52168 2 TLQIFNIEMK Unmodified 1235.6584 0.6583947 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10.5 1.38 2 1 2 1 80.208 80.208 2;3 3.271E-07 25113 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.71 60.217 187.73 128.58 342.33 57.821 281.89 435.41 176 130 324 56 277 416 3 3 4 1 3 5 176070 19507 2185 18784 45053;45054;45055;45056;45057;45058 52169;52170;52171;52172;52173;52174;52175 52171 7 TLQLLNVGEEDDGEYTCLAENSLGSAR Unmodified 2953.3611 0.36110964 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 4.5 0.5 1 1 82.858 82.858 3 7.2034E-17 31554 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.474 66.694 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 4115.5 19508 456 18785 45059;45060 52176;52177 52177 2 TLQNIAALLK Unmodified 1083.6652 0.66519463 183 Q3UM29;A0A0R4J0Q9 Cog7 Conserved oligomeric Golgi complex subunit 7 yes no 0 0 0 0 11.5 0.5 1 1 81.065 81.065 2;3 0.0013032 25126 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.2 44.579 0 67.368 0 0 19.874 0 0 65 0 0 19 0 0 2 0 0 1 0 4333.6 19509 183 18786 45061;45062 52178;52179 52178 2 TLQNILEVEK Unmodified 1185.6605 0.66050319 753 Q9JL62;D3Z1H9 Gltp Glycolipid transfer protein yes no 0 0 0 0 7.5 0.5 1 1 70.87 70.87 2;3 0.0010511 23723 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.943 46.486 88.32 81.433 55.261 48.908 111.55 67.211 83 83 56 46 111 65 1 1 1 1 2 1 7451.3 19510 753 18787 45063;45064 52180;52181 52181 2 TLQQQTFK Unmodified 992.5291 0.52909508 1621;1620 P54728;Q3TN85;Q8CAP3;P54726 Rad23b;Rad23a UV excision repair protein RAD23 homolog B;UV excision repair protein RAD23 homolog A no no 0 0 0 0 11.3 2.36 1 2 47.531 47.531 2;3 0.007461 15043 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.4 53.401 255.76 229.13 282.65 312.78 257.02 223.71 241 236 288 306 259 213 3 3 3 3 2 2 26233 19511 1621;1620 18788 45065;45066;45067 52182;52183;52184 52183 3 TLQWDTDPSVLQLQSDSELGR Unmodified 2387.1605 0.16048299 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 5.5 0.5 1 1 80.358 80.358 3 1.0199E-15 30345 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 116.04 104.28 50.111 17.563 38.83 0 49.162 0 47 19 37 0 47 0 2 1 1 0 2 0 11335 19512 743 18789 45068;45069 52185;52186 52185 2 TLRPALVGVVK Unmodified 1151.739 0.73902828 2864 Q99LP6 Grpel1 GrpE protein homolog 1, mitochondrial yes yes 0 0 0 1 12 0 1 55.878 55.878 3 0.014818 12484 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.04 30.187 0 144.84 182.86 193.49 0 178.02 0 139 185 187 0 167 0 1 1 1 0 1 18805 19513 2864 18790 45070 52187 52187 1 TLSDNVNLPQGVR Unmodified 1411.7419 0.7419414 102 A0A0G2JGQ6;Q9JLM8;Q80VB6;A0A0G2JGR9 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 5.5 0.5 1 1 55.667 55.667 2;3 0.0019504 18027 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.898 25.72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19514 102 18791 45071;45072 52188;52189 52189 2 TLSDVQK Unmodified 789.42323 0.42323303 493 A2AMH3;A2AMH5;A2AMH4;Q6X893 Slc44a1 Choline transporter-like protein 1 yes no 0 0 0 0 13 0 1 44.445 44.445 2 0.034637 13616 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.116 8.2035 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19515 493 18792 45073 52190 52190 1 TLSDYNIQK Unmodified 1080.5451 0.54513908 58 A0A0A6YW67;E9Q9J0;E9Q4P0;E9Q5F6;E9QNP0;Q5SX22;P62984;P62983;P0CG49;P0CG50;D3YYZ2 Gm8797;Uba52;Kxd1;Ubc;Ubb;Rps27a;Gm5239 Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-B;Ubiquitin;Polyubiquitin-C;Ubiquitin;Ubiquitin-related 1;Ubiquitin-related 2 yes no 0 0 0 0 8.29 2.12 1 2 2 1 1 54.842 54.842 2;3 3.6673E-18 15431 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 146.69 75.351 1146.4 1054.9 1200.2 754.29 1610.6 1404.9 1080 1083 1179 749 1606 1361 5 5 3 3 4 5 350100 19516 58 18793 45074;45075;45076;45077;45078;45079;45080 52191;52192;52193;52194;52195;52196;52197 52196 7 TLSGLLEWK Unmodified 1045.5808 0.5807963 2794 Q921F4 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 0 9.5 0.5 1 1 79.676 79.676 2 0.0052286 27214 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.213 46.126 78.488 150.77 84.514 111.49 82.835 244.95 74 148 83 102 83 232 1 2 1 1 1 2 11669 19517 2794 18794 45081;45082 52198;52199 52198 2 TLSGPVTGLLATAR Unmodified 1355.7773 0.77726428 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 9.33 0.471 2 1 69.538 69.538 2;3 7.9771E-11 20308 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.614 55.893 0 48.944 57.627 66.566 142.34 0 0 46 56 65 139 0 0 1 1 1 2 0 10568 19518 2226 18795 45083;45084;45085 52200;52201;52202 52202 3 TLSLDEVYLIDSGAQYK Unmodified 1913.9622 0.9622241 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 10 3 1 1 83.278 83.278 3 4.653E-06 30149 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.354 54.275 29.807 46.934 0 67.747 36.876 0 28 46 0 65 37 0 1 1 0 2 1 0 17369 19519 1967 18796 45086;45087 52203;52204 52203 2 TLSPGDSFSTFDTPYCK Unmodified 1921.8404 0.8403944 3206 Q9JHW2;A0A338P7A1;A0A338P6G0 Nit2 Omega-amidase NIT2 yes no 0 0 0 0 7 0 1 71.631 71.631 3 3.0052E-06 24659 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.296 55.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19520 3206 18797 45088 52205 52205 1 TLSQFTDALVTIR Unmodified 1463.7984 0.79839365 3224 Q9JK42 Pdk2 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial yes yes 0 0 0 0 9 0 1 81.388 81.388 2 3.3697E-21 27996 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 159.44 118.02 0 0 0 0 46.624 43.442 0 0 0 0 46 42 0 0 0 0 1 1 9495.7 19521 3224 18798 45089 52206 52206 1 TLSYLLPAIVHINHQPFLER Unmodified 2360.3005 0.30048612 2135 Q8BTS0;Q61656;S4R1I6;B1ARB9;B1ARC0 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 12 0 1 79.714 79.714 4 6.5549E-07 21693 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.69 48.762 69.631 48.83 25.951 58.99 85.233 38.644 65 46 28 56 84 37 2 1 2 2 2 1 6394.8 19522 2135 18799 45090 52207;52208;52209 52209 3 TLTAEEAEEEWER Unmodified 1591.7002 0.70019575 1924 Q3THK3 Gtf2f1 General transcription factor IIF subunit 1 yes yes 0 0 0 0 1 0 1 59.818 59.818 2 0.028939 19561 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.423 34.451 0 9.576 0 20.767 0 20.254 0 9 0 19 0 19 0 1 0 1 0 1 1476.2 19523 1924 18800 45091 52210 52210 1 TLTALPGLFLQNQLGGPAASR Unmodified 2124.1691 0.1691376 514 F6W7A9;H3BKM4;H3BL03;A2ASB3;Q80V94 Ap4e1 AP-4 complex subunit epsilon-1 yes no 0 0 0 0 12 0 1 87.991 87.991 3 0.0012593 24941 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.618 31.79 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1752.3 19524 514 18801 45092 52211 52211 1 TLTAVHDAILEDLVFPSEIVGK Unmodified 2366.2733 0.2733279 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 8.67 3.09 1 1 1 93.84 93.84 3;4 5.8033E-16 37350 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.725 74.13 29.559 46.722 103.13 23.329 13.977 93.409 28 47 99 24 14 88 1 2 3 2 1 3 5930.5 19525 996 18802 45093;45094;45095 52212;52213;52214 52214 3 TLTDEVNSPDSDRR Unmodified 1603.7438 0.7437919 1989 Q3UID0;Q6PDG5 Smarcc2 SWI/SNF complex subunit SMARCC2 yes no 0 0 0 1 3 0 1 38.783 38.783 3 0.000301 11476 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.992 69.611 0 29.271 31.149 38.585 0 0 0 28 32 37 0 0 0 1 1 1 0 0 5421.6 19526 1989 18803 45096 52215 52215 1 TLTDHEPSGIVR Unmodified 1323.6783 0.67827852 107 A0A0G2JGY9;Q7TME0 Lppr4 Lipid phosphate phosphatase-related protein type 4 yes no 0 0 0 0 4 0 1 42.325 42.325 3 0.0011353 12598 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.08 36.05 39.701 0 0 0 58.576 0 37 0 0 0 56 0 1 0 0 0 1 0 4145.8 19527 107 18804 45097 52216 52216 1 TLTEINIAFLPYESQVYSLDSADSFQSFYSPHK Unmodified 3796.8148 0.81483816 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 8 0 1 97.244 97.244 4 0.0012658 34937 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.358 26.698 0 0 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 2508.6 19528 1160 18805 45098 52217 52217 1 TLTFALR Unmodified 820.48069 0.48068833 3103 Q9DAR7 Dcps m7GpppX diphosphatase yes yes 0 0 0 0 10 0 1 61.801 61.801 2 0.026678 16806 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.139 64.247 0 86.802 90.336 114.08 98.839 76.064 0 83 93 111 102 74 0 1 1 1 1 1 8066.3 19529 3103 18806 45099 52218 52218 1 TLTGTVIDSGDGVTHVIPVAEGYVIGSCIK Unmodified 3057.5693 0.56925192 2836 Q99JY9;A0A087WRA1;A0A087WP86 Actr3 Actin-related protein 3 yes no 0 0 0 0 7.33 0.471 2 1 83.419 83.419 4;5 1.3584E-31 29605 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.712 78.746 79.562 65.326 98.123 39.778 63.516 77.072 75 65 93 37 65 74 3 2 2 1 2 2 22175 19530 2836 18807 45100;45101;45102 52219;52220;52221 52221 3 TLTLSQIGR Unmodified 987.57129 0.57129425 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 9 0 1 55.988 55.988 2 0.044902 15949 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.032 20.837 88.045 70.955 110.29 114.75 0 118.33 83 74 111 111 0 111 1 1 1 1 0 1 11648 19531 2418 18808 45103 52222 52222 1 TLTLVDTGIGMTK Unmodified 1348.7272 0.72720254 1354 P11499 Hsp90ab1 Heat shock protein HSP 90-beta yes yes 0 0 0 0 9.3 2.15 3 1 2 2 2 72.995 72.995 2;3 6.0604E-50 24927 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 205.46 0 247.21 209.46 444.39 268.86 173.84 342.55 232 213 435 269 176 324 4 4 5 5 4 5 138750 19532 1354 18809 45104;45105;45106;45107;45108;45109;45110;45111;45112;45113 52223;52224;52225;52226;52227;52228;52229;52230;52231;52232 52226 10 TLTPSYYR Unmodified 999.50255 0.50254598 1518 P35293 Rab18 Ras-related protein Rab-18 yes yes 0 0 0 0 8 0 1 46.922 46.922 2 0.013147 12473 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.754 57.018 78.986 0 69.932 0 0 69.29 74 0 65 0 0 65 1 0 1 0 0 1 6365.4 19533 1518 18810 45114 52233 52233 1 TLTSDVANLANEKEELNNK Unmodified 2102.0491 0.049141622 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 1 5 0 1 69.011 69.011 4 0.00063462 24877 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.768 26.669 0 48.944 0 50.278 0 0 0 46 0 46 0 0 0 1 0 1 0 0 1876.6 19534 347 18811 45115 52234 52234 1 TLTTAAVSTAQPILSK Unmodified 1600.9036 0.903587 3124 Q9DBG5 Plin3 Perilipin-3 yes yes 0 0 0 0 9 0 1 67.373 67.373 3 3.6235E-05 21416 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.773 58.023 39.701 0 0 0 66.371 47.142 37 0 0 0 65 46 1 0 0 0 1 1 5224.7 19535 3124 18812 45116 52235 52235 1 TLTTLLEK Unmodified 917.54335 0.54334816 2247 Q6PGF7 Exoc8 Exocyst complex component 8 yes yes 0 0 0 0 9 0 1 68.97 68.97 2 0.048077 22087 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.42 30.417 0 0 58.947 36.928 0 88.478 0 0 56 37 0 83 0 0 1 1 0 1 8120.5 19536 2247 18813 45117 52236 52236 1 TLTTVQGIADDYDK Unmodified 1538.7464 0.74641766 1576;2989 P48024;A0A1L1SSA3;J3QPZ8;J3QN87;Q9CXU9 Eif1;Eif1b Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b no no 0 0 0 0 5 0 1 66.24 66.24 3 3.5878E-05 23568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.927 80.349 29.931 22.454 0 29.825 41.431 32.93 28 23 0 28 42 32 1 1 0 1 1 1 3887.5 19537 1576;2989 18814 45118 52237 52237 1 TLVDEVQELEAK Unmodified 1372.7086 0.70857559 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 4 0 2 77.007 77.007 2;3 0.00021046 28569 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.466 49.717 9.51 29.151 0 30.117 25.88 95.958 9 28 0 28 28 93 1 1 0 1 1 2 9736.6 19538 121 18815 45119;45120 52238;52239 52238 2 TLVDIAK Unmodified 758.4538 0.45380487 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 7 0 1 59.195 59.195 2 0.033166 18874 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.753 0 332.75 211.26 341.22 227.8 230.9 251.38 313 225 338 231 239 242 1 1 1 1 1 1 28362 19539 1822 18816 45121 52240 52240 1 TLVEEER Unmodified 874.43961 0.43961137 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 2.5 0.5 1 1 37.707 37.707 2 0.027191 11038 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.9 33.733 178.23 0 161.63 189.15 181.89 85.387 167 0 158 185 185 83 2 0 2 2 2 1 31341 19540 573 18817 45122;45123 52241;52242 52242 2 TLVEYQELTGAR Unmodified 1378.7092 0.70924429 332 A0A1W2P872;D3YVV7;Q9JKN6 Nova2;Nova1 RNA-binding protein Nova-1 yes no 0 0 0 0 6 0 1 62.117 62.117 2 0.00074735 21100 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 72.846 24.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19541 332 18818 45124 52243 52243 1 TLVLDCHYPEDEIGHEDEAESDIFSIK Unmodified 3160.4183 0.41829017 2676 Q8R5L1;O35658 C1qbp Complement component 1 Q subcomponent-binding protein, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 76.246 76.246 4 3.8151E-17 28409 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.404 58.872 108.98 20.216 147.96 66.659 102.56 186.32 102 19 140 66 102 177 3 1 4 3 3 4 11599 19542 2676 18819 45125;45126 52244;52245;52246;52247;52248 52245 5 TLVLIGAQGVGR Unmodified 1182.7085 0.70845643 3241;3341 Q9WV34;Q9JLB0 Mpp2;Mpp6 MAGUK p55 subfamily member 2;MAGUK p55 subfamily member 6 no no 0 0 0 0 11 0.816 1 1 1 64.832 64.832 2 6.077E-33 17573 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 187.5 126.54 147.65 110.84 156.97 123.74 326.49 162.01 139 116 157 125 329 157 2 2 2 2 3 2 45414 19543 3341;3241 18820 45127;45128;45129 52249;52250;52251 52250 3 TLVLIGASGVGR Unmodified 1141.6819 0.68190733 632 B7ZCL8;P70290;A2AN84;B7ZCL9 Mpp1 55 kDa erythrocyte membrane protein yes no 0 0 0 0 11 0 1 65.384 65.384 2 0.0058948 17918 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60 28.711 69.468 54.9 0 80.882 0 0 65 56 0 74 0 0 1 1 0 1 0 0 7334.6 19544 632 18821 45130 52252 52252 1 TLVLLDNLNVR Unmodified 1268.7452 0.74523587 1219 O54734 Ddost Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit yes yes 0 0 0 0 9 0 1 76.272 76.272 3 0.00044932 25592 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.017 42.93 0 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 3228.9 19545 1219 18822 45131 52253 52253 1 TLVLLGAHGVGR Unmodified 1191.7088 0.70879078 1 A0A067XG53;O70589;F6Y9I5 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 0 8 4.97 1 1 1 55.649 55.649 3 3.5426E-15 12421 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 136.81 96.958 89.907 38.45 92.662 173.88 108.08 156.79 84 37 93 166 111 148 2 1 2 3 2 2 28778 19546 1 18823 45132;45133;45134 52254;52255;52256 52256 3 TLVLLLGVDPSR Unmodified 1281.7656 0.76563696 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 12 0 1 84.695 84.695 2 0.0094354 23654 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.347 35.841 14.898 24.531 0 0 0 0 14 24 0 0 0 0 1 1 0 0 0 0 1430.6 19547 3243 18824 45135 52257 52257 1 TLVLLMGK Unmodified 873.53576 0.53576037 1758;652 P62962;CON__P02584 Pfn1 Profilin-1 no no 0 0 0 0 3.56 4.79 7 1 1 76.167 76.167 2;3 0.00020974 26236 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 157.52 99.957 1057.4 1235.1 1095.5 874.42 827.51 1420 995 1245 1101 874 855 1353 8 11 8 9 7 9 179840 + 19548 1758;652 18825 45136;45137;45138;45139;45140;45141;45142;45143;45144 52258;52259;52260;52261;52262;52263;52264;52265;52266;52267;52268;52269;52270;52271 52259 14 TLVLSNLSYSATK Unmodified 1395.7609 0.76094551 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 9 4.74 1 1 1 1 68.79 68.79 2;3 5.3286E-14 25276 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.17 81.949 148.63 0 115.66 153.17 148.32 125.57 139 0 111 149 148 121 2 0 2 3 2 2 31651 19549 1333 18826 45145;45146;45147;45148 52272;52273;52274;52275 52275 4 TLVMAVYDFDR Unmodified 1328.6435 0.64347291 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 8.6 1.02 1 1 2 1 77.928 77.928 2;3 6.2513E-08 27701 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.23 87.979 137.72 194.99 221.73 115.17 157.64 223.93 130 195 214 111 158 213 3 4 4 2 3 4 37170 19550 1553 18827 45149;45150;45151;45152;45153 52276;52277;52278;52279;52280;52281 52277 6 TLVMLDEQGEQLER Unmodified 1659.8138 0.81378572 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 0 7.67 3.82 1 2 1 2 66.034 66.034 2;3 1.6905E-48 23578 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 163.51 150.74 128.93 79.254 263.53 87.324 58.576 39.442 121 84 260 84 56 37 3 3 4 3 1 1 84861 19551 1681 18828 45154;45155;45156;45157;45158;45159 52282;52283;52284;52285;52286;52287 52284 6 TLVNLLAPLNPVLSTAALDCK Unmodified 2222.2344 0.23443997 3023 Q9D0G0 Mrps30 28S ribosomal protein S30, mitochondrial yes yes 0 0 0 0 12 0 1 101.26 101.26 3 7.2833E-06 28679 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.247 50.403 0 0 0 9.837 0 9.594 0 0 0 9 0 9 0 0 0 1 0 1 1087.4 19552 3023 18829 45160 52288 52288 1 TLVPELIK Unmodified 911.56917 0.56916898 1391 P16332 Mut Methylmalonyl-CoA mutase, mitochondrial yes yes 0 0 0 0 8 0 1 70.372 70.372 2 0.04977 23513 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.582 31.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19553 1391 18830 45161 52289 52289 1 TLVPGPK Unmodified 710.43268 0.4326755 1196 O35465 Fkbp8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 0 9 0 1 49.154 49.154 2 0.057936 12751 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.439 43.72 48.605 0 126.48 94.111 0 108.73 46 0 121 93 0 102 1 0 1 1 0 1 13721 19554 1196 18831 45162 52290 52290 1 TLVQQLYTTLCIEQHQLNK Unmodified 2329.21 0.21001614 1997 Q3UMR5 Mcu Calcium uniporter protein, mitochondrial yes yes 0 0 0 0 11 0 1 85.881 85.881 4 3.5837E-07 27138 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.11 57.872 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 5489.2 19555 1997 18832 45163 52291 52291 1 TLVSPNKTETK Unmodified 1216.6663 0.66631685 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 1 9 0 1 43.776 43.776 3 0.0032172 10318 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.538 34.32 0 92.362 75.952 89.454 117.13 124.58 0 88 79 88 120 120 0 1 1 1 1 1 7805.4 19556 1019 18833 45164 52292 52292 1 TLVSVTK Unmodified 746.4538 0.45380487 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 10.5 1.71 1 1 1 1 1 1 51.501 51.501 2 0.003356 12251 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 150.17 32.231 1322.9 924.06 716.53 1647.7 1254.6 1554.7 1241 943 710 1567 1296 1492 5 5 3 6 5 6 513660 19557 1322 18834 45165;45166;45167;45168;45169;45170 52293;52294;52295;52296;52297;52298;52299 52296 7 TLVTGGATPELEALIAEENALR Unmodified 2267.2009 0.20089124 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A286YCF5;J3QP84 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 5 0 1 88.095 88.095 3 0.003666 33632 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 39.171 29.48 0 20.216 0 9.837 0 9.594 0 19 0 9 0 9 0 1 0 1 0 1 1980.8 19558 360 18835 45171 52300 52300 1 TLWLPWNQFIVVEK Unmodified 1771.9661 0.96612768 497 A2ANL9;Q9WTS4 Tenm1 Teneurin-1;Ten-1 intracellular domain;Teneurin C-terminal-associated peptide yes no 0 0 0 0 12 0 1 99.078 99.078 3 0.0076954 28278 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 44.807 26.89 20.292 18.848 0 25.139 0 0 19 19 0 23 0 0 1 1 0 1 0 0 1006.7 19559 497 18836 45172 52301 52301 1 TLWSLVAFPK Unmodified 1160.6594 0.65938097 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 4 5.2 3 1 91.187 91.187 2;3 5.1981E-07 31945 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 135.71 96.69 21.294 8.3281 48.373 72.732 59.703 0 20 9 48 69 60 0 2 1 3 3 3 0 5568.6 19560 823 18837 45173;45174;45175;45176 52302;52303;52304;52305 52302 4 TLWTVLDAIDQMWLPVVR Oxidation (M) 2171.1449 0.14489668 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 1 0 11.2 0.748 1 2 2 114.68 114.68 3 1.2369E-06 36505 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.866 63.391 0 0 8.8562 10.591 10.841 11.186 0 0 9 10 11 11 0 0 2 1 2 2 7109 19561 3126 18838 45177;45178;45179;45180;45181 52306;52307;52308;52309;52310 52307 196 5 TLWTVLDAIDQMWLPVVR Unmodified 2155.15 0.14998206 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 12.5 0.5 1 1 124.18 124.18 3 3.4687E-26 45643 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.09 111.29 2 0 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 6266.9 19562 3126 18838 45182;45183 52311;52312 52312 2 TLYEEAEEASDISQQVANLAISPTTPGPSWPGDALR Unmodified 3812.8381 0.8380928 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 5.5 1.12 1 1 1 1 101.7 101.7 4 2.3984E-41 36077 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.963 83.322 5.3507 4.907 8.1215 0 8.092 2 5 5 8 0 8 2 1 2 2 0 2 1 24113 19563 3355 18839 45184;45185;45186;45187 52313;52314;52315;52316;52317;52318;52319 52314 7 TLYESELADAR Unmodified 1266.6092 0.6091959 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 3.5 0.5 1 1 54.533 54.533 2 7.6244E-08 18440 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 115.42 77.333 0 59.584 0 61.208 0 69.29 0 56 0 56 0 65 0 1 0 1 0 1 10739 19564 182 18840 45188;45189 52320;52321 52321 2 TLYGFGG Unmodified 713.33844 0.33844077 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 8 0 1 69.061 69.061 2 0.023113 22956 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.41 82.255 147.3 124.96 205.29 161.55 0 178.02 139 130 204 159 0 167 1 1 1 1 0 1 115250 19565 1739 18841 45190 52322 52322 1 TLYLLAPSFPDK Unmodified 1363.7388 0.73875351 676 F6SBR5;D3Z1U0;E9QL53;D3YU89;P49025 Cit Citron Rho-interacting kinase yes no 0 0 0 0 10 0 1 81.911 81.911 3 0.00019364 25906 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.522 47.182 49.358 0 0 0 0 39.442 46 0 0 0 0 37 1 0 0 0 0 1 3700.7 19566 676 18842 45191 52323 52323 1 TLYNNQPIDFLK Unmodified 1464.7613 0.76127986 2626 Q8R016;E9PY26 Blmh Bleomycin hydrolase yes no 0 0 0 0 8.5 0.5 1 1 74.588 74.588 2;3 0.00073652 24761 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.14 34.491 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5649.3 19567 2626 18843 45192;45193 52324;52325 52325 2 TLYNNQPIDFLK Deamidation (N) 1465.7453 0.74529545 2626 Q8R016;E9PY26 Blmh Bleomycin hydrolase yes no 0 1 0 0 8 0 1 74.802 74.802 3 0.011222 25571 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.207 24.083 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19568 2626 18843 45194 52326 52326 957 1 TLYTEATALFIK Unmodified 1369.7493 0.74931819 2007 Q3UUI3 Them4 Acyl-coenzyme A thioesterase THEM4 yes yes 0 0 0 0 11 1.29 1 1 2 1 1 84.743 84.743 2;3 7.0736E-19 27080 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 152.04 98.569 128.21 75.73 79.345 39.778 55.099 48.031 120 74 75 37 56 46 4 2 2 1 2 1 22899 19569 2007 18844 45195;45196;45197;45198;45199;45200 52327;52328;52329;52330;52331;52332;52333 52329 7 TMADGNEK Unmodified 864.36473 0.36473187 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 8.5 4.5 1 1 34.843 34.843 2 0.011502 8814 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.178 44.674 227.65 51.854 106.81 140.16 102.63 274.23 213 56 102 130 111 260 2 1 1 1 1 2 21329 19570 1797 18845 45201;45202 52334;52335 52335 2 TMGCLATTHSK Unmodified 1205.5533 0.5532777 1702 P61922;F7C9G3 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 9 0 1 39.514 39.514 3 0.0012809 8656 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.473 28.295 69.093 48.46 68.5 65.153 96.184 66.545 65 51 69 65 97 65 1 1 1 1 1 1 7096.9 19571 1702 18846 45203 52336 52336 1 TMLEDLGMDDEGDDDPVPLPNVNAAILK Unmodified 2996.3995 0.39946898 3325 Q9WTX5;E9PUV4 Skp1;Skp1a S-phase kinase-associated protein 1 yes no 0 0 0 0 5 0 1 96.372 96.372 4 6.9415E-25 35576 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.123 76.875 17.033 0 22.636 0 0 0 16 0 21 0 0 0 2 0 2 0 0 0 1538.9 19572 3325 18847 45204 52337;52338 52338 2 TMLELLNQLDGFDSR Unmodified 1750.856 0.85598488 1712 P62192 Psmc1 26S protease regulatory subunit 4 yes yes 0 0 0 0 8.5 0.5 1 1 97.65 97.65 3 0.00048726 35114 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.128 16.382 9.657 0 0 19.044 33.474 4.9295 9 0 0 18 33 5 1 0 0 2 2 1 3158.1 19573 1712 18848 45205;45206 52339;52340 52339 2 TMLELLNQLDGFEATK Unmodified 1821.9183 0.91825079 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 9.75 1.92 1 2 1 98.688 98.688 3;4 4.3244E-05 35241 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.754 60.773 5.3072 9.0786 58.463 0 47.874 0 5 9 56 0 47 0 1 1 3 0 2 0 8542.1 19574 1713 18849 45207;45208;45209;45210 52341;52342;52343;52344;52345 52343 5 TMLELLNQLDGFQPNTQVK Unmodified 2188.1198 0.11980414 463 A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A yes no 0 0 0 0 11 2 1 1 95.828 95.828 3 4.7124E-10 34280 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.69 91.925 14.965 0 9.6625 20.246 27.69 19.464 14 0 9 19 28 19 1 0 1 1 1 1 3706.7 19575 463 18850 45211;45212 52346;52347 52346 2 TMLESLIADK Unmodified 1119.5846 0.58456105 2057;2282 Q7TMB8;A0A0U1RQ05;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 10 2.16 1 1 1 77.744 77.744 3 0.0016295 27018 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.01 23.038 29.753 79.16 87.149 47.138 126.47 250.86 28 75 83 47 130 241 1 2 2 2 3 4 9854.4 19576 2282;2057 18851 45213;45214;45215 52348;52349;52350;52351 52348 4 TMQDITLVVETLLQQMQDK Unmodified 2233.1334 0.1334053 2948 Q9CQZ1 Hsbp1 Heat shock factor-binding protein 1 yes yes 0 0 0 0 12 0.816 1 1 1 121.24 121.24 3 2.3357E-14 38049 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.49 98.2 16.06 7.0163 0 19.674 0 0 15 7 0 18 0 0 2 1 0 2 0 0 2815.3 19577 2948 18852 45216;45217;45218 52352;52353;52354 52352 3 TMQSEETR Unmodified 980.42331 0.42330938 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;F6RWZ9;E9PXV3 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 6 4.97 1 1 1 26.281 26.281 2 0.012914 5463 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.177 38.759 89.6 62.509 36.475 66.781 130.97 56.526 84 65 37 65 130 56 3 3 1 2 3 2 10547 19578 103 18853 45219;45220;45221 52355;52356;52357 52355 3 TMQTLLSLVK Unmodified 1132.6526 0.65258104 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 5.2 5.15 3 1 1 86.059 86.059 2;3 5.0657E-05 23656 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.47 54.796 29.692 80.618 85.901 0 67.99 37 28 79 84 0 65 37 1 2 2 0 1 2 35165 19579 1295 18854 45222;45223;45224;45225;45226 52358;52359;52360;52361;52362;52363 52362 6 TMTGLDTPVLMVIK Unmodified 1517.8197 0.81972272 2028 Q4KMM3;E9Q0A7;A0A2R8VHT3;B1H3M0 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 13 0 1 85.131 85.131 3 0.035191 33308 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 36.445 3.2416 138.57 0 154.44 112.12 0 108.73 130 0 148 111 0 102 1 0 1 1 0 1 5984.1 19580 2028 18855 45227 52364 52364 1 TMTLFSALR Unmodified 1038.5532 0.55320134 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11.5 0.5 1 1 71.648 71.648 2 0.0022582 20874 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.815 45.183 49.063 0 127.61 44.561 56.529 0 46 0 120 46 56 0 1 0 2 1 1 0 18394 19581 3204 18856 45228;45229 52365;52366 52365 2 TMVDELFAEIVR Unmodified 1421.7225 0.72245152 2346 Q80ZJ1 Rap2a Ras-related protein Rap-2a yes yes 0 0 0 0 13 0 1 96.207 96.207 3 0.029817 38623 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 40.475 18.73 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1250 19582 2346 18857 45230 52367 52367 1 TMVNLPVMSPFR Unmodified 1390.7101 0.71011269 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 11 0 1 77.939 77.939 2 9.773E-06 23641 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.91 71.691 0 0 58.508 46.791 0 0 0 0 56 46 0 0 0 0 1 1 0 0 7171.6 19583 2629 18858 45231 52368 52368 1 TMVVHEK Unmodified 842.43202 0.43202358 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 8.5 2.69 1 1 1 1 35.881 35.881 3 0.0050679 9167 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.15 53.583 682.32 311.2 656.24 657.12 1071.3 912.84 641 328 654 653 1083 885 4 2 4 4 5 5 111960 19584 1326 18859 45232;45233;45234;45235 52369;52370;52371;52372;52373 52373 5 TMYLLGYIPK Unmodified 1197.6468 0.64676738 1230 O55029 Copb2 Coatomer subunit beta' yes yes 0 0 0 0 1 0 1 81.533 81.533 2 0.057841 28521 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.878 28.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19585 1230 18860 45236 52374 52374 1 TNADTDGMVK Unmodified 1050.4652 0.4651742 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 4.33 0.471 2 1 43.275 43.275 2;3 0.00012554 12683 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.52 48.767 108.52 109.74 126.35 60.214 99.301 194.38 102 112 120 56 102 185 2 3 2 1 2 3 16965 19586 1164 18861 45237;45238;45239 52375;52376;52377 52377 3 TNAENEFVTIK Unmodified 1264.6299 0.62993134 657 CON__P04264;P04104 Krt1 Keratin, type II cytoskeletal 1 yes no 0 0 0 0 5 0 1 59.081 59.081 2 0.00070356 20309 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.247 48.734 59.92 0 28.305 37.906 45.064 38.156 56 0 28 37 46 37 1 0 1 1 1 1 4198.5 + 19587 657 18862 45240 52378 52378 1 TNCDLYEK Unmodified 1041.4437 0.44371047 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7 3.54 1 1 1 1 45.662 45.662 2;3 0.0066901 13931 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.1 42.087 256.67 72.906 261.49 293.58 298.76 228.13 241 74 259 288 306 222 3 1 3 3 3 3 35676 19588 1321 18863 45241;45242;45243;45244 52379;52380;52381;52382 52380 4 TNCLDCLDR Unmodified 1165.4856 0.48559206 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 5 0 1 47.195 47.195 2 0.030373 14596 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.102 37.573 49.126 0 38.995 17.761 36.238 48.002 46 0 37 19 37 46 1 0 1 1 1 1 3776.5 19589 927 18864 45245 52383 52383 1 TNEAQAIETAR Unmodified 1202.5891 0.58912916 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 0 2 0 1 39.447 39.447 2 3.6985E-14 11591 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 159.12 108.52 253.53 153.14 0 0 233.82 257.7 237 160 0 0 232 248 1 1 0 0 1 1 54699 19590 1688 18865 45246 52384 52384 1 TNEAQAIETAR Deamidation (N) 1203.5731 0.57314474 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 1 0 0 2 0 2 42.689 42.689 2 0.011004 12690 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.958 42.365 30.044 0 0 39.589 45.317 28.555 28 0 0 37 46 28 1 0 0 1 1 1 3977.3 19591 1688 18865 45247;45248 52385;52386 52386 652 2 TNEFLENFK Unmodified 1140.5451 0.54513908 2923 Q9CQE1;B1AWZ5 Nipsnap3b Protein NipSnap homolog 3B yes no 0 0 0 0 6.5 0.5 1 1 68.217 68.217 3 0.0010467 23137 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.862 54.118 29.514 66.196 58.259 39.57 74.589 29.041 28 65 56 37 74 28 1 2 1 1 2 1 5242.7 19592 2923 18866 45249;45250 52387;52388 52388 2 TNEGVIEFR Unmodified 1063.5298 0.52982336 1940 Q3TWW8 Srsf6 Serine/arginine-rich splicing factor 6 yes yes 0 0 0 0 4 0 1 52.031 52.031 2 0.035257 17247 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.699 19.036 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19593 1940 18867 45251 52389 52389 1 TNEIVEEQYTPQSLATLESVFQELGK Unmodified 2952.4604 0.46041298 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 5 0 1 100.23 100.23 4 3.9718E-08 35986 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.691 39.793 12.812 5.4181 6.1023 0 0 0 12 6 6 0 0 0 1 1 1 0 0 0 1724.4 19594 1882 18868 45252 52390 52390 1 TNEKEQLQGLNDR Unmodified 1543.759 0.75904803 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 1 7 3.54 1 1 1 1 43.07 43.07 3 0.00023253 12595 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.649 67.948 756.75 528.67 585.59 469.13 572.68 692.55 711 549 593 471 582 665 4 3 3 3 2 4 92663 19595 1557 18869 45253;45254;45255;45256 52391;52392;52393;52394 52394 4 TNEKEQLQGLNDR Deamidation (N) 1544.7431 0.74306362 1557 P46660 Ina Alpha-internexin yes yes 0 1 0 1 4 0 1 45.395 45.395 3 0.023271 14068 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.546 23.883 0 0 0 0 103.06 105.79 0 0 0 0 102 102 0 0 0 0 1 1 6115.8 19596 1557 18869 45257 52395 52395 589;590 1 TNEKVELQELNDR Unmodified 1586.79 0.79001381 1423;1493 P20152;A0A0A6YWC8;A2AKJ2;P31001 Vim;Des Vimentin;Desmin no no 0 0 0 1 4 0 1 49.578 49.578 3 8.8551E-05 16075 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.45 50.375 0 0 140.66 0 161.69 104.12 0 0 130 0 158 102 0 0 1 0 1 1 10677 19597 1423;1493 18870 45258 52396 52396 1 TNELGDGGVGLVLQGLQNPTCK Unmodified 2269.1372 0.13724512 2741 Q91VI7;A0A1B0GSG5;A0A1B0GRG4;A0A1B0GRY7 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 7 0 1 81.629 81.629 3 8.2129E-15 29437 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.412 69.269 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2292.7 19598 2741 18871 45259 52397 52397 1 TNEQMHQLVAAYK Unmodified 1531.7453 0.74531222 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 7 0 1 53.911 53.911 3 0.00011379 16340 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.589 45.822 99.016 51.466 86.219 0 92.28 145.54 93 56 83 0 93 139 1 1 1 0 1 1 5106.5 19599 1050;1380 18872 45260 52398 52398 1 TNFDAFPDK Unmodified 1053.4767 0.47672516 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6 0 1 60.411 60.411 2 0.021594 20304 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.624 8.2411 39.295 26.374 45.936 46.148 74.002 37.33 37 28 46 46 74 37 1 1 1 1 1 1 3480.4 19600 3331 18873 45261 52399 52399 1 TNGDQSDQLVWR Deamidation (N) 1418.6426 0.64262129 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 1 0 0 5.4 3.83 2 2 1 56.109 56.109 2 6.6998E-12 19850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 131.17 89.468 39.298 158.23 114.56 102.01 76.024 126.82 37 153 115 98 79 121 1 5 3 3 3 4 29748 19601 3371 18874 45262;45263;45264;45265;45266 52400;52401;52402;52403;52404 52401 1135 5 TNIVTASVDAINFHDK Unmodified 1743.8792 0.87916317 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 8.5 2.69 1 1 1 1 68.356 68.356 3 4.9472E-38 23248 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 154.74 113.09 296.98 217.23 217.12 297.84 299.51 299.87 279 223 223 288 305 287 4 3 3 3 3 3 85993 19602 852 18875 45267;45268;45269;45270 52405;52406;52407;52408 52406 4 TNIVTASVDAINFHDKIR Unmodified 2013.0643 0.064338176 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 1 9 0 1 66.488 66.488 4 0.022754 20971 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.992 17.16 0 0 0 0 85.217 46.604 0 0 0 0 83 46 0 0 0 0 1 1 3665 19603 852 18876 45271 52409 52409 1 TNLALVIGTHSWR Unmodified 1466.7994 0.7993967 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 11.5 0.5 1 1 63.675 63.675 3 0.0010821 17148 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.968 45.078 99.416 35.328 32.728 109.13 21.304 29.24 93 37 32 102 23 28 2 1 1 2 1 1 26080 19604 2619 18877 45272;45273 52410;52411 52410 2 TNLALVVGTNSWR Unmodified 1429.7678 0.76776223 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 10.5 0.5 1 1 69.358 69.358 2;3 0.00077884 20246 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.513 46.297 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 9907.5 19605 2187 18878 45274;45275 52412;52413 52412 2 TNLFVFK Unmodified 867.48544 0.48543935 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 11 0 1 71.863 71.863 2 0.030533 20940 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19606 62 18879 45276 52414 52414 1 TNLIVNYLPQNMTQEELR Unmodified 2175.0994 0.099403054 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 8 0 1 79.033 79.033 3 0.016802 27569 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.246 20.304 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19607 1812 18880 45277 52415 52415 1 TNLPIFK Unmodified 831.48544 0.48543935 1259;1258 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493;Q78ZM0;O70492 Snx12;Snx3 Sorting nexin-12;Sorting nexin-3 no no 0 0 0 0 9 0 1 64.851 64.851 3 0.017624 20204 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.981 27.936 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19608 1259;1258 18881 45278 52416 52416 1 TNLYQDDAVTGEAAGLALGLVMLGSK Unmodified 2606.3262 0.32616811 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 8 0 1 104.49 104.49 4 1.4806E-08 36429 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.79 48.476 0 5.2032 6.9882 6.1415 0 6.396 0 5 7 6 0 6 0 1 1 1 0 1 813.19 19609 1943 18882 45279 52417 52417 1 TNPDAATQNR Unmodified 1086.5054 0.50539953 232 A0A0U1RQ90;Q80T41 Gabbr2 Gamma-aminobutyric acid type B receptor subunit 2 yes no 0 0 0 0 3.5 0.5 1 1 25.168 25.168 2 3.9664E-05 4779 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 119.34 81.777 34.215 0 48.385 0 0 24.518 32 0 47 0 0 23 1 0 2 0 0 1 5495.9 19610 232 18883 45280;45281 52418;52419 52419 2 TNPLNITLPFSFIDYYK Unmodified 2045.051 0.050979523 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 11 1.41 1 1 1 1 1 101.04 101.04 3;4 1.9172E-08 28654 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.56 80.588 127.86 136.66 127.78 109.36 64.508 11.726 120 131 120 101 63 11 6 4 5 3 3 1 93468 19611 2585 18884 45282;45283;45284;45285;45286 52420;52421;52422;52423;52424;52425;52426;52427;52428 52427 9 TNPLNITLPFSFIDYYKK Unmodified 2173.1459 0.14594254 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 1 11.5 0.5 1 1 91.772 91.772 3 0.0010973 29440 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.764 40.749 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2454.9 19612 2585 18885 45287;45288 52429;52430 52429 2 TNQIGTVNDR Unmodified 1116.5523 0.55234972 2982 Q9CX00 Ist1 IST1 homolog yes yes 0 0 0 0 4.5 0.5 1 1 34.755 34.755 2 0.0014512 8638 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.653 35.104 79.054 34.615 29.073 29.921 65.626 28.811 74 38 28 28 65 28 2 2 1 1 2 1 4402 19613 2982 18886 45289;45290 52431;52432 52432 2 TNSNDDNIR Unmodified 1047.4581 0.45811498 177 Q5SVF9;A0A0R4J0J6;Q8BKT7 Thoc5 THO complex subunit 5 homolog yes no 0 0 0 0 1 0 1 25.715 25.715 2 2.4959E-05 4760 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.46 60.249 20.267 13.382 8.8329 0 0 0 19 14 9 0 0 0 1 1 1 0 0 0 1133.5 19614 177 18887 45291 52433 52433 1 TNSPDLDSQSLSLSSGTDQEPLQR Unmodified 2574.2045 0.20453264 878 E9Q0W6;E9Q4K0;Q8BL65;F6UI99;F6VVW4;D3Z0Y4 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 0 3 0 1 61.647 61.647 3 6.7301E-19 21970 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.451 68.492 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19615 878 18888 45292 52434 52434 1 TNSPLQVK Unmodified 885.49198 0.4919813 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 8 0 1 47.07 47.07 2 0.02059 12541 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.92 37.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19616 970 18889 45293 52435 52435 1 TNSVQAFLGLEMLAK Unmodified 1620.8545 0.85452832 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 11.5 1.5 1 1 89.662 89.662 3 0.00033099 29154 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.716 43.518 20.126 18.387 28.257 18.725 19.014 0 19 19 28 19 19 0 1 1 1 1 1 0 3745.2 19617 927 18890 45294;45295 52436;52437 52436 2 TNTFIIGVK Unmodified 991.57023 0.57023162 2831 Q99JP7 Ggt7 Gamma-glutamyltransferase 7;Gamma-glutamyltransferase 7 heavy chain;Gamma-glutamyltransferase 7 light chain yes yes 0 0 0 0 10 0 1 65.327 65.327 2 0.0021401 18294 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.342 52.207 59.541 44.015 54.708 66.055 91.954 66.666 56 46 56 65 93 65 1 1 1 1 1 1 4796.9 19618 2831 18891 45296 52438 52438 1 TNTGSAMLEQIAMSDR Oxidation (M) 1739.7818 0.78183366 1282;2173 Q64332;O88935 Syn2;Syn1 Synapsin-2;Synapsin-1 no no 0 0 1 0 4 0 1 56.524 56.524 3 0.0010737 19305 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.502 46.302 20.019 27.802 38.265 0 0 39.442 19 28 37 0 0 37 1 1 1 0 0 1 2450 19619 2173;1282 18892 45297 52439 52439 61 1 TNTGSAMLEQIAMSDR Unmodified 1723.7869 0.78691904 1282;2173 Q64332;O88935 Syn2;Syn1 Synapsin-2;Synapsin-1 no no 0 0 0 0 7.75 3.11 1 1 1 1 67.027 67.027 2;3 1.8882E-24 22593 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.36 112.4 217.73 118.28 95.9 57.867 92.28 175.39 204 121 93 56 93 167 4 2 3 2 1 2 77366 19620 2173;1282 18892 45298;45299;45300;45301 52440;52441;52442;52443 52442 4 TNVIQSLLAR Unmodified 1113.6506 0.6506072 3160 Q9EP69 Sacm1l Phosphatidylinositide phosphatase SAC1 yes yes 0 0 0 0 12 0 1 71.869 71.869 2 0.0015119 18486 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 90.306 48.019 88.333 71.756 61.214 98.001 0 0 83 74 65 93 0 0 1 1 1 1 0 0 10466 19621 3160 18893 45302 52444 52444 1 TNVLGHLQQGGAPTPFDR Unmodified 1906.965 0.96495848 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 9 2.35 1 2 1 58.017 58.017 3;4 7.0485E-09 17702 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.75 92.061 168.23 167.24 164.36 130.33 307.58 228.94 158 166 167 130 306 223 3 3 3 2 3 4 50851 19622 1357 18894 45303;45304;45305;45306 52445;52446;52447;52448 52446 4 TPAAETLSQLGQTLQSLK Unmodified 1885.0157 0.015656649 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 10.7 1.7 1 1 1 88.313 88.313 3;4 1.4872E-07 34807 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.77 76.235 20.265 28.989 115.66 58.397 37.384 107.67 19 28 111 56 37 102 1 1 3 1 1 3 11846 19623 2160 18895 45307;45308;45309 52449;52450;52451 52451 3 TPAEALASFDYIVR Unmodified 1551.7933 0.79330827 2470 Q8BWM0 Ptges2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form yes yes 0 0 0 0 8 0 1 83.497 83.497 2 0.021873 29696 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.894 23.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19624 2470 18896 45310 52452 52452 1 TPAGLQVLNDYLADK Deamidation (N) 1617.825 0.82500233 1247 O70251;A0A087WS46;G3UX43;G3UZ47;M0QWK5;M0QWH8 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 1 0 0 6.5 0.5 1 1 85.598 85.598 3 0.0043569 32003 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.026 23.729 0 19.417 47.809 17.918 0 0 0 19 46 19 0 0 0 1 1 1 0 0 870.45 19625 1247 18897 45311;45312 52453;52454 52453 341 2 TPAGLQVLNDYLADK Unmodified 1616.841 0.84098675 1247 O70251;A0A087WS46;G3UX43;G3UZ47;M0QWK5;M0QWH8 Eef1b;Eef1b2 Elongation factor 1-beta yes no 0 0 0 0 9.5 2.06 2 1 1 82.614 82.614 2;3 2.9584E-05 28474 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.055 78.392 186.17 194.74 284.53 81.676 189.76 0 176 195 278 83 185 0 3 2 3 1 2 0 61498 19626 1247 18897 45313;45314;45315;45316 52455;52456;52457;52458 52457 4 TPALSPQRPLTTQQPQSGTLK Unmodified 2248.2175 0.21754435 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 8 0 1 51.097 51.097 4 9.049E-11 14358 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.316 65.778 132.75 97.083 149.18 100.06 134.82 174.17 125 102 148 102 139 167 1 1 1 1 1 1 27131 19627 2173 18898 45317 52459 52459 1 TPALVFEYINNTDFK Unmodified 1770.8829 0.88285156 271 A0A1D5RLE4;O54833 Csnk2a2 Casein kinase II subunit alpha' yes no 0 0 0 0 10.7 1.7 1 1 1 88.6 88.6 3 3.0502E-05 31254 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.022 45.053 29.952 18.196 28.57 87.659 36.338 58.659 28 19 28 84 37 56 1 1 1 3 1 2 6487.4 19628 271 18899 45318;45319;45320 52460;52461;52462 52460 3 TPAPSPQTSLPNPITYLTK Unmodified 2025.0783 0.078256906 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 0 10 1.63 1 2 1 1 1 80.897 80.897 3;4 2.4894E-08 27868 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.41 86.267 247.22 301.21 517.89 286.23 261.21 185.48 232 296 509 279 259 176 3 4 8 5 4 4 97084 19629 3151 18900 45321;45322;45323;45324;45325;45326 52463;52464;52465;52466;52467;52468;52469;52470;52471 52466 9 TPAQLSGPGK Unmodified 954.51345 0.51344502 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 7.5 0.5 1 1 44.642 44.642 2 0.022422 12066 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.067 19.445 78.877 27.498 64.945 74.91 111.72 27.445 74 28 65 74 111 28 2 1 2 2 2 1 3648.3 19630 3285 18901 45327;45328 52472;52473 52472 2 TPASPVVHIR Unmodified 1075.6138 0.61382777 1110 G5E924;Q8R081 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 6 0 1 39.909 39.909 3 0.018122 10647 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.894 11.193 59.516 0 96.053 95.924 0 0 56 0 93 93 0 0 1 0 1 1 0 0 3580.6 19631 1110 18902 45329 52474 52474 1 TPCAETPAEPVDWAFAQR Unmodified 2044.9313 0.93127509 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 4 0 1 69.857 69.857 3 0.00010168 25285 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.864 40.472 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2676.7 19632 24 18903 45330 52475 52475 1 TPDASPEPK Unmodified 940.45018 0.45017606 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 4 0 1 37.982 37.982 3 0.042246 10604 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.462 20.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19633 1943 18904 45331 52476 52476 1 TPDEVLEAEAEPK Unmodified 1426.6828 0.68275477 133 Z4YKC4;A0A0R4J112;A2AMI2;A0A0N4SVL0;Q80XI3 Eif4g3 Eukaryotic translation initiation factor 4 gamma 3 yes no 0 0 0 0 2.5 0.5 1 1 61.234 61.234 3 0.00010417 21640 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.959 56.55 40.679 18.848 0 20.265 26.699 68.528 38 19 0 19 28 65 2 1 0 1 1 2 8835.7 19634 133 18905 45332;45333 52477;52478 52478 2 TPDIDLAK Unmodified 871.4651 0.46509784 74;1367 A0A0A6YY91;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 9 4 1 1 56.791 56.791 2;3 0.011446 19358 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.973 47.465 275.52 299.5 67.346 309.54 472.19 243.22 258 300 65 295 473 239 1 2 1 2 2 1 14552 19635 74;1367 18906 45334;45335 52479;52480 52479 2 TPDSEAPDVESR Unmodified 1301.5735 0.57353867 1915 Q3TDD9 Ppp1r21 Protein phosphatase 1 regulatory subunit 21 yes yes 0 0 0 0 1.5 0.5 1 1 38.134 38.134 2 2.8552E-05 10330 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 97.911 72.252 20.387 0 0 30.275 17.475 49.603 19 0 0 28 19 47 1 0 0 1 1 2 10906 19636 1915 18907 45336;45337 52481;52482 52481 2 TPDSVIIDSLGQEER Unmodified 1657.8159 0.81589421 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 4 0.816 1 1 1 68.373 68.373 2;3 7.6885E-07 24626 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.746 47.308 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 6169 19637 121 18908 45338;45339;45340 52483;52484;52485 52485 3 TPDTIRR Unmodified 857.47191 0.47191456 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 6 0 1 26.525 26.525 3 0.065291 4520 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.76 5.2293 34.336 0 0 0 43.132 23.287 32 0 0 0 42 23 1 0 0 0 1 1 6590.7 19638 2185 18909 45341 52486 52486 1 TPDVTQNSEPR Unmodified 1242.584 0.58404378 3402 Q9Z2Y3;Q3UVL6;D3Z6A8;D3Z6A9 Homer1 Homer protein homolog 1 yes no 0 0 0 0 4 0 1 35.774 35.774 2 0.057371 9568 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.35 29.564 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1964.4 19639 3402 18910 45342 52487 52487 1 TPEDGGYTCEITEK Unmodified 1598.677 0.67701747 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 3.5 0.5 1 1 53.541 53.541 3 0.00011216 18264 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.412 85.133 109.03 82.986 0 79.425 77.461 196.07 102 83 0 74 83 186 2 1 0 1 1 2 40149 19640 1382 18911 45343;45344 52488;52489 52488 2 TPEDISTPPEGTKPCLQTPVTSER Unmodified 2639.2749 0.27486082 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 1 5 0 1 57.119 57.119 4 0.039451 19320 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.592 17.79 20.104 37.753 15.506 60.284 0 39.442 19 37 19 56 0 37 1 1 1 1 0 1 3123 19641 3449;3451 18912 45345 52490 52490 1 TPEEGGYSYEISEK Unmodified 1587.694 0.69404774 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 4 0 1 54.83 54.83 3 6.3923E-05 18531 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.769 54.644 0 98.952 0 71.045 0 0 0 93 0 65 0 0 0 1 0 1 0 0 26437 19642 1382 18913 45346 52491 52491 1 TPEEIDVPATIPEKPGELSASR Unmodified 2335.1907 0.19072048 1469 P27671 Rasgrf1 Ras-specific guanine nucleotide-releasing factor 1 yes yes 0 0 0 1 4 0 1 64.897 64.897 4 0.011996 23094 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.221 24.659 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1625.8 19643 1469 18914 45347 52492 52492 1 TPEELSAIK Unmodified 986.52843 0.52842638 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 5 0 1 56.896 56.896 2 0.010973 19195 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.173 30.403 59.507 64.428 43.04 57.622 54.298 47.487 56 65 46 56 56 46 1 1 1 1 1 1 10167 19644 1577 18915 45348 52493 52493 1 TPEEYPESAK Unmodified 1149.519 0.51898391 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 6.25 3.96 1 1 1 1 43.376 43.376 2;3 8.9678E-05 13173 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.342 71.487 245.26 370.15 481.7 140.68 373.52 493.56 231 371 471 139 373 473 2 4 3 1 3 4 71521 19645 2980 18916 45349;45350;45351;45352 52494;52495;52496;52497 52495 4 TPELTWER Unmodified 1030.5084 0.50835964 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 0 8 3.56 1 1 1 54.789 54.789 2 0.013179 17692 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.696 37.883 365.14 130.72 377.24 374.02 420.18 331.24 343 139 373 370 429 319 3 2 3 3 3 2 119390 19646 2298;1040 18917 45353;45354;45355 52498;52499;52500 52499 3 TPEQVTEIANR Unmodified 1256.6361 0.63607935 3088 Q9D880 Timm50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 0 0 0 0 4 0 1 48.225 48.225 2 0.025498 15427 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.903 16.995 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19647 3088 18918 45356 52501 52501 1 TPETAEFLGEDLLQVEQR Unmodified 2074.0219 0.021864239 429 S4R2T6;A2A5V3;A2A5V2;S4R2D3;P55194 Sh3bp1 SH3 domain-binding protein 1 yes no 0 0 0 0 4 0 1 82.213 82.213 3 1.268E-05 31014 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.82 58.623 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 1514.1 19648 429 18919 45357 52502 52502 1 TPEVSGYTYEK Unmodified 1272.5874 0.58739782 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 3.56 1 1 1 52.191 52.191 2;3 5.4968E-05 17015 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.737 61.188 99.789 47.49 86.957 40.441 0 59.696 93 46 83 37 0 56 1 1 1 1 0 1 25165 19649 1382 18920 45358;45359;45360 52503;52504;52505 52503 3 TPEVVPSVAAEESHR Unmodified 1606.7951 0.79509919 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 3.5 0.5 1 1 46.281 46.281 3 7.0365E-06 14467 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.652 66.251 49.121 29.792 39.786 0 58.576 39.442 46 28 37 0 56 37 1 1 1 0 1 1 14394 19650 3449;3451 18921 45361;45362 52506;52507 52507 2 TPFGAYGGLLK Unmodified 1122.6073 0.6073454 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 72.627 72.627 2;3 1.2843E-07 21187 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.46 81.27 79.176 48.944 37.934 38.18 77.404 99.138 74 46 37 37 74 93 1 1 1 1 1 1 19350 19651 2472 18922 45363;45364 52508;52509 52509 2 TPFHTSLHSGTSK Unmodified 1398.6892 0.68917755 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 9 0 1 37.326 37.326 4 6.7356E-05 7717 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.744 60.004 0 136.41 114.27 165.88 0 265.43 0 130 120 158 0 249 0 1 1 1 0 1 6695 19652 3344 18923 45365 52510 52510 1 TPFLLVGTQIDLR Unmodified 1471.8399 0.83986454 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 10.5 0.5 1 1 84.113 84.113 2;3 0.00063841 26737 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.392 46.224 59.958 25.749 0 30.288 16.815 48.556 56 28 0 28 19 46 1 1 0 1 1 1 8769.8 19653 1676 18924 45366;45367 52511;52512 52511 2 TPFPYITCHR Unmodified 1290.6179 0.61792687 3267 Q9QXS6 Dbn1 Drebrin yes yes 0 0 0 0 9 0 1 52.405 52.405 3 0.0052716 14253 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.885 42.223 117.38 137.09 172.96 0 0 0 111 139 168 0 0 0 1 1 1 0 0 0 15654 19654 3267 18925 45368 52513 52513 1 TPFQVEHVAQLLTGSPELK Unmodified 2093.1157 0.11570504 3103 Q9DAR7;Q3TBW9 Dcps m7GpppX diphosphatase yes no 0 0 0 0 10 0 1 79.77 79.77 3 0.048654 24986 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 29.72 12.019 0 29.343 26.844 37.981 45.721 18.949 0 28 28 37 46 19 0 1 1 1 1 1 2248 19655 3103 18926 45369 52514 52514 1 TPFSLVGNVFELNFK Unmodified 1710.8981 0.8981077 443 A2ACG7;Q9DBG6 Rpn2 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 yes no 0 0 0 0 12 0 1 98.153 98.153 3 0.00053253 28094 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.378 49.611 14.9 0 20.483 0 0 14.924 14 0 19 0 0 14 1 0 1 0 0 1 1492.1 19656 443 18927 45370 52515 52515 1 TPGDTEGATAEAAK Unmodified 1317.6048 0.6048388 641 B9EJA2 Cttnbp2 Cortactin-binding protein 2 yes yes 0 0 0 0 3 0 1 40.792 40.792 3 8.355E-05 12425 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.649 68.857 39.079 55.995 57.035 0 37.384 38.375 37 56 56 0 37 37 1 1 1 0 1 1 6672.7 19657 641 18928 45371 52516 52516 1 TPGFEIIHGLLDR Unmodified 1466.7882 0.78816332 3329 Q9WUA2 Farsb Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 8 0 1 76.618 76.618 3 0.0018915 26524 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.122 14.439 0 19.566 38.86 0 18.828 0 0 19 37 0 18 0 0 1 1 0 1 0 6473.7 19658 3329 18929 45372 52517 52517 1 TPGPGAQSALR Unmodified 1053.5567 0.55670682 1716 P62264;D3YVF4;D3Z7I1 Rps14 40S ribosomal protein S14 yes no 0 0 0 0 5.5 0.5 1 1 37.158 37.158 2 0.0028596 9278 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.302 41.739 30.044 39.368 0 60.38 80.059 116.04 28 37 0 56 83 111 1 1 0 1 2 2 10155 19659 1716 18930 45373;45374 52518;52519 52519 2 TPGPPSSQGSPVDTQPAAQK Unmodified 1948.949 0.94903365 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8 Synj1 Synaptojanin-1 yes no 0 0 0 0 9 4 1 1 46.246 46.246 3;4 1.1E-05 14365 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.009 45.317 39.419 28.694 113.15 113 83.807 0 37 28 111 111 83 0 1 1 2 2 1 0 12683 19660 927 18931 45375;45376 52520;52521 52521 2 TPGQLSDNNSR Unmodified 1187.5531 0.553078 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 5 0 1 32.813 32.813 2 0.018525 7654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 57.149 26.579 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 2194.8 19661 2485 18932 45377 52522 52522 1 TPGSDGTVEVR Unmodified 1116.5411 0.54111633 2288 Q7TNR6 Igsf21 Immunoglobulin superfamily member 21 yes yes 0 0 0 0 3 0 1 37.547 37.547 2 3.4474E-05 10946 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.82 49.963 0 9.576 0 30.604 0 20.254 0 9 0 28 0 19 0 1 0 1 0 1 4796.8 19662 2288 18933 45378 52523 52523 1 TPGSWLQAEAAGQSSDDIK Unmodified 1959.9174 0.91739917 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 9 4 1 1 67.951 67.951 3 1.3356E-07 24454 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.554 53.016 39.59 68.215 75.169 37.897 113.14 66.061 37 65 75 37 112 65 1 1 2 1 2 2 402310 19663 885 18934 45379;45380 52524;52525 52524 2 TPGTDTPSDQPCCR Unmodified 1590.6403 0.6402548 169 J3QQ44;A0A0R4J0B8 Sh3gl3 yes no 0 0 0 0 2.5 0.5 1 1 34.206 34.206 3 9.7901E-19 9091 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.39 110.6 9.5428 0 19.198 29.46 0 0 9 0 19 28 0 0 1 0 1 1 0 0 3439.4 19664 169 18935 45381;45382 52526;52527 52526 2 TPGTGSLAAAVETASGR Unmodified 1544.7794 0.77944912 1670 P60487 Pdxp Pyridoxal phosphate phosphatase yes yes 0 0 0 0 9 3.29 2 1 2 60.372 60.372 2;3 3.5484E-05 20340 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.032 66.177 266.96 110.13 122.79 149.41 276.4 239.42 250 111 120 139 278 232 4 1 1 2 3 4 41130 19665 1670 18936 45383;45384;45385;45386;45387 52528;52529;52530;52531;52532 52529 5 TPGTPGTPSYPR Unmodified 1229.6041 0.60405094 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 7.75 3.11 1 1 1 1 41.431 41.431 2 2.0209E-11 11885 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 117.99 80.794 79.42 229.74 159.08 79.153 167.69 252.12 75 223 158 74 166 241 2 3 3 2 2 3 49262 19666 1424 18937 45388;45389;45390;45391 52533;52534;52535;52536 52533 4 TPHCFLTGHGAEK Unmodified 1453.6772 0.67723266 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 7.5 0.5 1 1 40.061 40.061 4 7.0523E-06 10048 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.19 86.46 148.35 273.93 136.26 330.73 405.58 205.16 139 269 139 317 409 197 1 2 1 2 2 1 15031 19667 2487 18938 45392;45393 52537;52538 52537 2 TPHLILSSSSQRPVIYQWSK Unmodified 2326.2434 0.24336517 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 1 11 0 1 61.6 61.6 4 1.5222E-10 16279 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.269 73.194 0 88.312 0 0 106.69 0 0 83 0 0 102 0 0 1 0 0 1 0 9611 19668 3210 18939 45394 52539 52539 1 TPIAAGHPSMNLLLR Unmodified 1589.8712 0.87118144 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 7.75 3.96 1 1 1 1 60.094 60.094 3 1.2035E-05 16071 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.79 81.105 370.44 314.27 391.61 493.44 185.54 422.17 348 325 389 476 197 401 3 4 3 4 2 3 178440 19669 307 18940 45395;45396;45397;45398 52540;52541;52542;52543 52542 4 TPIFLNEVLVK Unmodified 1271.7489 0.74892426 876 E9Q0N0;Q9Z0R4 Itsn1 Intersectin-1 no no 0 0 0 0 9.5 0.5 1 1 81.885 81.885 2 0.0033054 28218 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.152 25.07 50.087 0 57.74 58.362 64.017 67.463 47 0 56 56 65 65 2 0 2 1 1 2 5928.1 19670 876 18941 45399;45400 52544;52545 52544 2 TPIGSFLGSLASQPATK Unmodified 1673.8988 0.89883598 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 8.88 4.62 2 1 2 2 1 81.034 81.034 3;4 2.6684E-59 22221 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 189.8 158.84 682.31 521.82 355.89 669.5 1153.2 287.47 638 513 343 640 1134 278 6 7 5 7 8 7 513760 19671 2622 18942 45401;45402;45403;45404;45405;45406;45407;45408 52546;52547;52548;52549;52550;52551;52552;52553;52554;52555;52556 52554 11 TPIIEEEQNNSANTQK Unmodified 1814.8646 0.86463532 2028 Q4KMM3 Oxr1 Oxidation resistance protein 1 yes yes 0 0 0 0 4.5 0.5 1 1 49.305 49.305 3 4.5105E-19 15985 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 99.747 79.651 0 29.792 0 61.208 0 59.696 0 28 0 56 0 56 0 1 0 1 0 1 2498.8 19672 2028 18943 45409;45410 52557;52558 52557 2 TPILLGSLAHQIYR Unmodified 1580.9039 0.90386178 2852 Q99L13 Hibadh 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 70.488 70.488 3 2.1384E-07 24007 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.809 55.329 48.672 74.584 52.02 86.458 61.699 67.529 46 74 56 83 65 65 1 1 1 1 1 1 43508 19673 2852 18944 45411;45412 52559;52560 52559 2 TPLIADVYYIVGGTSPK Unmodified 1792.9611 0.96110188 1091 Q9D7V9;G3XA18;H3BL13 Naaa N-acylethanolamine-hydrolyzing acid amidase;N-acylethanolamine-hydrolyzing acid amidase subunit alpha;N-acylethanolamine-hydrolyzing acid amidase subunit beta yes no 0 0 0 0 10 0 1 92.179 92.179 3 0.0011657 29960 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.547 27.313 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2473.9 19674 1091 18945 45413 52561 52561 1 TPLVPGFECSGIVEALGDSVK Unmodified 2174.0929 0.092920692 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 9 2.89 1 2 1 2 89.414 89.414 3;4 2.105E-07 33100 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.536 50.44 59.431 29.009 65.832 35.692 132.7 75.653 56 28 65 37 130 75 3 1 2 2 3 3 19249 19675 2300 18946 45414;45415;45416;45417;45418;45419 52562;52563;52564;52565;52566;52567 52563 6 TPLVSVLLEGPPHSGK Unmodified 1629.909 0.90900673 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 10.8 1.34 1 2 1 1 1 71.471 71.471 3;4 6.7166E-34 23390 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 151.73 131.62 1323.4 453.04 629.49 1346.1 1181.5 1553.6 1239 462 624 1296 1226 1487 7 2 4 7 6 6 411790 19676 1554 18947 45420;45421;45422;45423;45424;45425 52568;52569;52570;52571;52572;52573;52574;52575 52568 8 TPMGIILDALEQQEDNINK Unmodified 2141.0674 0.067434223 2675 Q8R5J9 Arl6ip5 PRA1 family protein 3 yes yes 0 0 0 0 7 0 1 99.309 99.309 3 0.017322 36305 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.981 15.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19677 2675 18948 45426 52576 52576 1 TPMGLLLEALGQEQEAGS Unmodified 1842.9033 0.90332901 3213 Q9JIG8;A0A140LJ36 Praf2 PRA1 family protein 2 yes no 0 0 0 0 10 2.16 1 1 1 110.67 110.67 3 7.1744E-07 37030 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.151 36.126 6.4012 4.256 6.184 6.1894 4.0415 18.347 6 4 6 6 4 18 1 1 1 1 1 3 3663.7 19678 3213 18949 45427;45428;45429 52577;52578;52579 52577 3 TPNGLAIDHR Deamidation (N) 1093.5516 0.55162144 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 1 0 0 4 0 1 40.162 40.162 3 0.0030477 11589 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.655 44.049 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 2723.7 19679 175 18950 45430 52580 52580 64 1 TPNGVVLAPVQLGK Deamidation (N) 1392.7977 0.79766537 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 0 8 1 1 1 70.954 70.954 3 0.0011945 24348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.358 42.141 39.464 0 39.835 0 38.702 0 37 0 37 0 37 0 1 0 1 0 1 0 5747.3 19680 3204 18951 45431;45432 52581;52582 52581 1104 2 TPPAANQASDPEEK Unmodified 1453.6685 0.66850169 2257 Q6W8Q3 Pcp4l1 Purkinje cell protein 4-like protein 1 yes yes 0 0 0 0 6.67 4.5 1 1 1 40.142 40.142 3 4.0842E-05 12118 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.943 72.317 29.782 17.722 126.36 75.084 57.461 32.472 28 19 121 74 56 32 1 1 2 1 1 1 13625 19681 2257 18952 45433;45434;45435 52583;52584;52585 52583 3 TPPASPHR Unmodified 861.4457 0.4456998 504 D3Z781;E9QAU4;A2AQ25;Q8BHR1 Etl4;Skt Sickle tail protein yes no 0 0 0 0 5 0 1 22.678 22.678 3 0.030852 3495 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.423 33.791 0 0 29.033 28.347 27.986 0 0 0 28 28 28 0 0 0 1 1 1 0 1407.6 19682 504 18953 45436 52586 52586 1 TPPEAIALCSR Unmodified 1213.6125 0.61250714 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 0 6 0 1 52.475 52.475 2 0.0024408 16524 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.037 50.979 60.006 16.17 0 19.859 48.25 0 56 19 0 19 47 0 1 1 0 1 1 0 3255.1 19683 947 18954 45437 52587 52587 1 TPPEAIALCSSLLEYTPSSR Unmodified 2191.0831 0.083084287 787 D3Z7E5;Q2NL51 Gsk3a Glycogen synthase kinase-3 alpha yes no 0 0 0 0 6 0 1 80.478 80.478 3 3.6261E-05 29662 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.19 42.269 20.011 18.067 47.804 17.578 18.059 29.333 19 19 46 19 19 28 1 1 1 1 1 1 2976.6 19684 787 18955 45438 52588 52588 1 TPPGSGEPPK Unmodified 965.48181 0.48181054 46 A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau yes no 0 0 0 0 8 3.56 1 1 1 37.539 37.539 2 0.0069591 9619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.349 39.128 69.169 93.711 34.516 118.96 120.81 86.097 65 93 37 111 121 84 2 3 1 2 3 3 21903 19685 46 18956 45439;45440;45441 52589;52590;52591;52592;52593 52591 5 TPPKSPSASK Unmodified 998.53966 0.53965977 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 1 8 0 1 34.968 34.968 3 0.020513 6970 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.205 35.824 0 0 140.66 0 117.39 114.98 0 0 130 0 116 111 0 0 1 0 1 1 16738 19686 572;46 18957 45442 52594 52594 1 TPPLALVFR Unmodified 1012.607 0.60695147 3307 Q9R111 Gda Guanine deaminase yes yes 0 0 0 0 10 0 1 74.552 74.552 2 0.0015032 22524 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.33 61.785 0 115.95 128.77 110.73 155.24 143.74 0 111 130 111 158 139 0 1 1 1 1 1 32344 19687 3307 18958 45443 52595 52595 1 TPPPGSVK Unmodified 781.4334 0.43340378 2575 Q8K021 Scamp1 Secretory carrier-associated membrane protein 1 yes yes 0 0 0 0 13 0 1 37.807 37.807 2 0.031393 10362 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.501 40.079 69.618 25.098 0 61.208 0 59.696 65 28 0 56 0 56 1 1 0 1 0 1 6252.5 19688 2575 18959 45444 52596 52596 1 TPPPSQGK Unmodified 810.42357 0.42356738 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 7.8 2.79 1 1 1 1 1 31.627 31.627 2 0.0045692 6841 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.39 85.033 1941 2209.8 1243.8 1554.2 5416.7 2974.1 1825 2176 1340 1580 5323 2935 8 5 7 8 7 9 466400 19689 991;1305 18960 45445;45446;45447;45448;45449 52597;52598;52599;52600;52601;52602;52603;52604;52605 52599 9 TPQASTYSYETSDR Unmodified 1604.6954 0.69544472 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 41.428 41.428 2;3 2.9796E-15 12755 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 104.81 89.603 0 96.724 133.3 34.899 65.973 0 0 93 130 37 65 0 0 2 2 1 2 0 34451 19690 1382 18961 45450;45451;45452;45453 52606;52607;52608;52609 52606 4 TPSAAYLWVGAGASEAEK Unmodified 1806.8788 0.87882882 1365 P13020;CON__Q3SX14 Gsn Gelsolin yes no 0 0 0 0 7 0 1 71.746 71.746 3 0.00050651 24714 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.278 32.897 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 19691 1365 18962 45454 52610 52610 1 TPSALAILENANVLAR Unmodified 1651.9257 0.92571943 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 8.43 3.54 1 1 1 1 1 1 1 84.668 84.668 3 2.0849E-45 29469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 171.26 143.29 98.91 103.44 214.93 93.882 201.01 77.889 93 102 205 93 196 75 4 3 6 3 6 3 222350 19692 1308 18963 45455;45456;45457;45458;45459;45460;45461 52611;52612;52613;52614;52615;52616;52617;52618;52619;52620;52621 52616 11 TPSLPTPPTR Unmodified 1065.5819 0.58185893 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 0 8 2.61 2 1 1 1 49.29 49.29 2;3 4.5158E-05 14196 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.37 70.038 276.78 262.23 352.88 325.14 520.17 256.53 260 260 352 325 520 250 4 3 4 4 5 3 59807 19693 572;46 18964 45462;45463;45464;45465;45466 52622;52623;52624;52625;52626 52624 5 TPSLPTPPTREPK Unmodified 1419.7722 0.7721789 46;572 B1AQW2;A0A0A0MQC7;A2A5Y6;P10637 Mapt Microtubule-associated protein;Microtubule-associated protein tau no no 0 0 0 1 10 3 1 1 47.822 47.822 3 0.00034802 13746 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.189 54.688 207.93 161.82 228.58 327.7 274.08 76.586 195 157 227 317 276 74 2 2 2 3 2 1 23269 19694 572;46 18965 45467;45468 52627;52628;52629 52628 3 TPSPPEPEPAGTAQK Unmodified 1505.7362 0.73618733 1019 F7BNZ5;Q80YN3;A2AVX1;E9Q8Q5 Bcas1 Breast carcinoma-amplified sequence 1 homolog yes no 0 0 0 0 4 0 1 44.936 44.936 3 2.2541E-05 13838 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.311 49.88 49.225 26.473 0 0 56.948 47.411 46 28 0 0 56 46 1 1 0 0 1 1 7472 19695 1019 18966 45469 52630 52630 1 TPSSDVLVFDYTK Unmodified 1470.7242 0.72422566 2100;458 A2AFI9;A2AFJ1;Q60973;F6ZLC6;Q60972 Rbbp7;Rbbp4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 no no 0 0 0 0 9.5 3.5 1 1 71.878 71.878 3 9.7825E-05 25763 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.731 70.35 128.64 118.4 99.597 67.657 117.44 144.82 121 121 102 65 120 139 2 2 2 1 2 2 13680 19696 458;2100 18967 45470;45471 52631;52632 52631 2 TPTAAHAK Unmodified 795.4239 0.42390173 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6 0 1 27.33 27.33 3 0.061142 4869 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 41.029 19.522 0 0 58.058 56.892 45.503 0 0 0 56 56 46 0 0 0 1 1 1 0 2358.5 19697 3285 18968 45472 52633 52633 1 TPTEEGTPTSEQNPFLFQEGK Unmodified 2336.0808 0.080835681 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 68.044 68.044 3 0.00096532 24455 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.904 26.961 0 9.576 0 0 29.288 0 0 9 0 0 28 0 0 1 0 0 1 0 2775 19698 3449;3451 18969 45473 52634 52634 1 TPTPEPAEVETR Unmodified 1325.6463 0.64630969 687 D3YUV1;Q99J45 Nrbp1 Nuclear receptor-binding protein yes no 0 0 0 0 2 0 1 41.84 41.84 2 6.7891E-05 12691 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.618 64.96 9.5773 8.8313 5.9138 0 12.234 9.2449 9 9 6 0 12 9 1 1 1 0 1 1 4419.7 19699 687 18970 45474 52635 52635 1 TPTPEPFDSETR Unmodified 1375.6256 0.62557424 2728 Q91V36;A0A0R4J002 Nrbp2 Nuclear receptor-binding protein 2 yes no 0 0 0 0 3 0 1 48.812 48.812 2 0.010532 16129 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.889 10.862 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19700 2728 18971 45475 52636 52636 1 TPTQSYR Unmodified 851.41373 0.41373097 3076 Q9D6U8 Fam162a Protein FAM162A yes yes 0 0 0 0 6 0 1 28.855 28.855 2 0.03171 5494 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.916 52.961 54.5 10.747 28.338 23.319 6.9951 39.242 51 14 28 23 9 37 1 1 1 1 1 1 2200.4 19701 3076 18972 45476 52637 52637 1 TPTTILLTPER Unmodified 1240.7027 0.70270235 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 8.5 2.69 1 1 1 1 61.202 61.202 2 1.3257E-08 20668 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.93 79.767 99.079 107.76 27.942 66.604 109.26 18.9 93 108 28 62 108 19 2 2 1 1 2 1 27293 19702 2585 18973 45477;45478;45479;45480 52638;52639;52640;52641;52642 52638 5 TPTVEYICTQQNILFMLLK Unmodified 2311.1956 0.19561162 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 10 0 1 102.31 102.31 3 0.038006 33162 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 31.111 14.618 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 724.48 19703 1888 18974 45481 52643 52643 1 TPVDYIDLPYSSSPSR Unmodified 1795.8628 0.8628444 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417;A0A286YD34 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 6.5 0.5 1 1 70.798 70.798 3 0.00029484 25176 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.861 51.591 69.165 0 97.543 37.088 26.585 68.531 65 0 92 37 28 65 2 0 2 1 1 2 5537.3 19704 353 18975 45482;45483 52644;52645 52644 2 TPVEPEVAIHR Unmodified 1246.667 0.66698555 1680 P60867 Rps20 40S ribosomal protein S20 yes yes 0 0 0 0 6.67 4.5 1 1 1 43.782 43.782 3 7.9195E-06 13048 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.93 76.549 0 39.368 144.55 151.38 152.2 222.71 0 37 139 149 157 213 0 1 2 3 2 3 28908 19705 1680 18976 45484;45485;45486 52646;52647;52648 52648 3 TPVFVSPTPPPPPPPLPSALSTSSLR Unmodified 2638.437 0.43703918 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 10.4 1.29 2 2 2 1 81.597 81.597 3;4 1.8199E-11 28064 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.701 55.311 172.04 141.44 324.52 185.3 146.25 243.14 162 140 320 181 153 232 3 5 6 2 2 5 71914 19706 2674 18977 45487;45488;45489;45490;45491;45492;45493 52649;52650;52651;52652;52653;52654;52655;52656 52649 8 TPVGFIGLGNMGNPMAK Unmodified 1702.8535 0.85348246 2852 Q99L13 Hibadh 3-hydroxyisobutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 11 0 1 80.244 80.244 3 0.0008243 24721 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.993 29.136 0 69.16 0 0 0 69.29 0 65 0 0 0 65 0 1 0 0 0 1 5796.7 19707 2852 18978 45494 52657 52657 1 TPVLFDVYEIK Unmodified 1322.7122 0.71220441 1848 P97384;D3Z7U0 Anxa11 Annexin A11;Annexin yes no 0 0 0 0 7.75 0.829 2 1 1 82.733 82.733 2;3 0.0013267 29261 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.298 47.589 30.044 0 49.214 56.918 101.4 77.882 28 0 47 56 102 74 1 0 1 2 3 1 6430.8 19708 1848 18979 45495;45496;45497;45498 52658;52659;52660;52661 52660 4 TPVQDHR Unmodified 851.42496 0.42496436 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 13 0 1 21.376 21.376 3 0.013394 3127 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.692 47.72 0 0 12.286 15.663 0 15.99 0 0 12 15 0 15 0 0 1 1 0 1 1970.5 19709 1382 18980 45499 52662 52662 1 TPVSEDMLGR Unmodified 1103.5281 0.52810881 1741 P62814;Q91YH6;A0A0U1RNU9 Atp6v1b2;Atp6v1b1 V-type proton ATPase subunit B, brain isoform yes no 0 0 0 0 6.25 3.96 1 1 1 1 51.533 51.533 2 1.7438E-05 16764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.86 90.082 533.51 326.85 531.27 349.22 501.79 503.47 501 345 526 351 513 483 3 3 4 3 3 3 132200 19710 1741 18981 45500;45501;45502;45503 52663;52664;52665;52666;52667 52666 5 TPVSEHVTK Unmodified 996.52401 0.52400971 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6 0.816 1 1 1 36.029 36.029 3 0.0001417 8774 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.04 66.305 186.63 352.64 301.95 158.13 287.64 262.1 176 348 306 162 285 252 1 3 3 2 2 2 43849 19711 1321 18982 45504;45505;45506 52668;52669;52670 52669 3 TPVSHPQR Unmodified 920.48281 0.48281359 249 A0A1B0GR85;A0A1D5RLN6;Q8BRV5 Kiaa1671 Uncharacterized protein KIAA1671 yes no 0 0 0 0 7.75 3.11 1 1 1 1 21.103 21.103 3 0.0023583 2996 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.069 59.133 24.293 28.92 48.489 9.837 48.339 36.766 23 28 46 9 47 35 2 2 2 1 2 2 5479.1 19712 249 18983 45507;45508;45509;45510 52671;52672;52673;52674 52672 4 TPVTVTLK Unmodified 857.52222 0.52221879 3234 Q9JKR6;A0A1L1SQ34;E0CYZ2 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 0 9 0 1 56.023 56.023 2 0.039524 15982 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.897 23.366 79.402 0 0 71.045 0 118.33 74 0 0 65 0 111 1 0 0 1 0 1 3739.4 19713 3234 18984 45511 52675 52675 1 TPVVEGLTEGEEEELR Unmodified 1785.8632 0.86323833 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 0 2.5 0.5 1 1 64.815 64.815 3 1.5347E-05 23354 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.451 80.057 20.134 28.121 38.462 19.433 27.389 29.31 19 28 38 19 28 28 1 1 2 1 2 1 8921.1 19714 524 18985 45512;45513 52676;52677 52677 2 TPVVEGLTEGEEEELRAELAK Unmodified 2298.1591 0.159086 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 1 3.67 0.471 1 2 75.443 75.443 3;4 5.271E-07 27880 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 67.418 50.538 30.044 19.729 29.112 29.902 66.616 0 28 19 28 28 65 0 1 1 1 1 2 0 6572.7 19715 524 18986 45514;45515;45516 52678;52679;52680 52680 3 TPYLGDVAIVVHPGK Unmodified 1564.8613 0.86132826 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 8 0.816 1 1 1 67.133 67.133 3 1.3956E-05 21916 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.764 53.566 49.128 105.22 0 130.01 60.982 157.09 46 102 0 120 65 149 1 2 0 2 1 2 7336.8 19716 3172 18987 45517;45518;45519 52681;52682;52683 52682 3 TPYTDVNIVTIR Unmodified 1390.7456 0.7456298 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 7.83 2.41 2 2 1 1 64.72 64.72 2;3 4.9744E-16 21398 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.22 104.2 325.42 196.01 324.15 97.81 353.85 317.17 306 204 316 102 353 306 5 3 5 2 5 4 165590 19717 307 18988 45520;45521;45522;45523;45524;45525 52684;52685;52686;52687;52688;52689 52686 6 TQANDYFK Unmodified 985.45051 0.45051041 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 8.33 3.3 2 1 49.743 49.743 2;3 0.0060596 15818 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.047 48.269 78.49 170.05 140.17 210.21 234.47 201.18 74 167 148 204 240 195 1 2 2 2 2 2 10669 19718 2080 18989 45526;45527;45528 52690;52691;52692 52692 3 TQAQTIVSVLSTLSNVSLDTIYK Unmodified 2480.3374 0.33738472 2497 Q8C3X2 Ccdc90b Coiled-coil domain-containing protein 90B, mitochondrial yes yes 0 0 0 0 11.3 0.471 2 1 108.85 108.85 3;4 3.8598E-15 35553 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 81.949 66.695 12.7 28.605 19.799 15.082 11.683 5.1331 12 28 19 14 12 5 1 2 1 2 2 1 3075.3 19719 2497 18990 45529;45530;45531 52693;52694;52695 52693 3 TQASQSTQAHENNR Unmodified 1570.7084 0.70840945 3053 Q9D2V7;G3X9L5;E9PYU1 Coro7 Coronin-7;Coronin yes no 0 0 0 0 3.5 0.5 1 1 17.02 17.02 3 1.7596E-31 2470 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 162.7 136.16 11.723 6.0693 8.2327 0 0 5.33 11 6 8 0 0 5 2 1 2 0 0 1 1819.2 19720 3053 18991 45532;45533 52696;52697 52696 2 TQATLLTTWLTELYLSR Unmodified 2009.0833 0.083342284 2656 Q8R307 Vps18 Vacuolar protein sorting-associated protein 18 homolog yes yes 0 0 0 0 12.5 0.5 1 1 105.15 105.15 3 0.012577 29196 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 38.453 8.0153 6.4241 16.759 0 6.4455 5.9799 0 6 17 0 6 6 0 1 2 0 1 1 0 1681.1 19721 2656 18992 45534;45535 52698;52699 52698 2 TQAVEYFGEWILNPSNYAFQR Unmodified 2532.2074 0.2073736 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4;A2AGQ2;A2AGQ7;A2AGQ9;A2AGQ5;A2AGR1;A6PWP8;A2AGQ3;A2AGQ8;A6PWP7 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 10 0 1 99.103 99.103 3 0.035143 32437 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 30.585 16.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1778 19722 204 18993 45536 52700 52700 1 TQAYPDQKPGTSGLR Unmodified 1617.8111 0.8110836 3022 Q9D0F9 Pgm1 Phosphoglucomutase-1 yes yes 0 0 0 1 9.5 3.5 1 1 41.334 41.334 3 3.262E-07 11597 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.71 43.931 108.37 89.899 104.42 0 0 138.58 102 93 102 0 0 130 1 1 1 0 0 1 9403.8 19723 3022 18994 45537;45538 52701;52702 52701 2 TQCALAASK Unmodified 948.46987 0.46986564 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 7.5 0.5 1 1 41.415 41.415 2 0.0024073 9789 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.95 56.465 39.034 55.869 64.767 45.222 63.595 67.475 37 56 65 46 65 65 1 1 1 1 1 1 6629.5 19724 3174 18995 45539;45540 52703;52704 52704 2 TQCPDDSTCCELPTGK Unmodified 1867.7386 0.73864822 1482 Q3U9N4;P28798 Grn Granulins;Acrogranin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 yes no 0 0 0 0 4 0 1 49.028 49.028 3 0.00044965 15833 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.98 48.193 20.186 18.553 18.028 29.53 0 20.254 19 19 19 28 0 19 1 1 1 1 0 1 2606.7 19725 1482 18996 45541 52705 52705 1 TQDENPVVHFFK Unmodified 1459.7096 0.70957864 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 8.43 3.11 1 1 4 3 4 1 1 1 1 4 64.132 64.132 3;4 4.273E-27 20241 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 170.95 139.72 12434 11812 8403.1 7773.5 20570 17985 11686 11961 8509 7889 20559 17407 34 30 30 33 33 36 2232200 19726 991;1305 18997 45542;45543;45544;45545;45546;45547;45548;45549;45550;45551;45552;45553;45554;45555;45556;45557;45558;45559;45560;45561;45562 52706;52707;52708;52709;52710;52711;52712;52713;52714;52715;52716;52717;52718;52719;52720;52721;52722;52723;52724;52725;52726;52727;52728;52729;52730;52731;52732;52733;52734;52735;52736;52737;52738;52739;52740;52741;52742;52743;52744;52745;52746;52747;52748 52730 43 TQDENPVVHFFK Deamidation (N) 1460.6936 0.69359423 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 1 0 0 5.5 0.5 1 1 66.472 66.472 3 0.0089396 23449 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.448 30.915 59.808 124.11 35.921 69.864 119.37 115.99 56 121 37 65 121 112 1 2 1 1 2 2 12517 19727 991;1305 18997 45563;45564 52749;52750 52749 263 2 TQDQISNIK Unmodified 1045.5404 0.54038805 2140 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8;A2A6G6 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 5.5 0.5 1 1 46.253 46.253 2;3 3.0674E-05 13583 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142 66.303 123.29 128.53 88.378 162.66 195.27 157.53 116 130 88 157 199 153 2 2 1 2 2 2 15831 19728 2140 18998 45565;45566 52751;52752 52752 2 TQDQQEYYVTTPGAEVEDPQK Unmodified 2425.0921 0.092128649 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 2.5 0.5 1 1 58.246 58.246 4 2.9827E-11 20385 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.395 68.141 58.229 18.94 116 84.219 36.133 29.848 55 19 112 84 37 28 2 1 2 2 1 1 22825 19729 3449;3451 18999 45567;45568 52753;52754 52754 2 TQEEIVAK Unmodified 916.48656 0.48656157 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 0 4 0 1 44.85 44.85 2 0.051118 13804 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.184 18.492 0 0 0 89.163 82.722 0 0 0 0 83 83 0 0 0 0 1 1 0 3964.5 19730 193 19000 45569 52755 52755 1 TQEHFTHNTVR Unmodified 1368.6535 0.65346075 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 5 0 1 25.936 25.936 4 0.028511 4651 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 41.339 18.113 39.257 56.49 26.709 0 56.581 58.081 37 56 28 0 56 56 1 1 1 0 1 1 3529.4 19731 1786 19001 45570 52756 52756 1 TQEILSQLPFK Unmodified 1302.7184 0.71835242 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 0 0 0 0 10 2.16 1 1 1 76.456 76.456 3 0.0008605 25660 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.44 30.965 48.813 152.47 102.58 16.815 112.41 85.27 46 148 102 19 111 83 1 3 2 1 2 2 19964 19732 345 19002 45571;45572;45573 52757;52758;52759 52758 3 TQEQCGVEPR Unmodified 1202.535 0.5349851 3189 Q9ERT9 Ppp1r1a Protein phosphatase 1 regulatory subunit 1A yes yes 0 0 0 0 6 4.97 1 1 1 29.607 29.607 2 2.8469E-05 6905 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 125.3 77.262 93.973 34.936 46.187 88.139 48.927 38.56 88 37 46 84 51 37 3 1 1 3 2 1 17571 19733 3189 19003 45574;45575;45576 52760;52761;52762 52760 3 TQEQCVHNETK Unmodified 1372.6041 0.60412729 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 4 0 1 28.439 28.439 3 0.0064329 6167 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.132 37.874 0 9.576 0 29.902 37.328 0 0 9 0 28 37 0 0 1 0 1 1 0 2405.8 19734 1653 19004 45577 52763 52763 1 TQEQISNVK Unmodified 1045.5404 0.54038805 3134 Q9DC07;F6RM14 Nebl LIM zinc-binding domain-containing Nebulette yes no 0 0 0 0 8 3.56 1 1 1 41.557 41.557 2;3 0.00028405 11960 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.97 65.46 117.93 64.997 198.75 173.77 61.382 234.9 111 65 195 166 65 222 2 1 3 2 1 2 25484 19735 3134 19005 45578;45579;45580 52764;52765;52766 52764 3 TQETLSQAGQK Unmodified 1189.5939 0.59388018 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 0 6 0 1 40.714 40.714 3 0.00084059 11059 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.676 36.07 0 68.087 64.176 46.453 0 88.478 0 65 65 46 0 83 0 1 1 1 0 1 5444.2 19736 524 19006 45581 52767 52767 1 TQFENPVLEAK Unmodified 1274.6507 0.65066678 87 A0A0G2JEG6;A0A0G2JE00;Q9WVQ1 Magi2 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 yes no 0 0 0 0 6 0 1 62.345 62.345 3 0.0072072 21209 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.774 16.36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19737 87 19007 45582 52768 52768 1 TQFLPPNLLALFAPR Acetyl (Protein N-term) 1738.977 0.97702672 252 A0A1B0GRR8;Q62376;A0A1B0GR69;A0A1B0GRV8 Snrnp70 U1 small nuclear ribonucleoprotein 70 kDa yes no 1 0 0 0 12 0.707 1 2 1 120.74 120.74 2;3 0.00024957 31992 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.92 42.831 5.365 2.0939 2.0384 5.465 0 9.594 5 2 2 5 0 9 1 1 1 1 0 1 9099.1 19738 252 19008 45583;45584;45585;45586 52769;52770;52771;52772;52773 52771 5 TQFLSPTQNESLLEENPEK Unmodified 2203.0645 0.064457335 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 6 0 1 69.538 69.538 3 1.4245E-07 24573 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.859 74.134 0 0 20.558 0 18.867 29.31 0 0 19 0 19 28 0 0 1 0 1 1 2958.3 19739 3249 19009 45587 52774 52774 1 TQFNSLQQLVAYYSK Unmodified 1788.9046 0.90464964 1048 F8WI90;P05480 Src Neuronal proto-oncogene tyrosine-protein kinase Src yes no 0 0 0 0 11.5 1.5 1 1 86.901 86.901 3 2.9843E-05 27982 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.208 52.255 29.952 38.412 0 51.041 17.529 39.442 28 38 0 47 19 37 1 2 0 1 1 1 3050 19740 1048 19010 45588;45589 52775;52776;52777 52775 3 TQGASSPR Unmodified 802.39333 0.39332988 2531 Q8CFR5 Dtna Dystrobrevin yes yes 0 0 0 0 5 0 1 19.242 19.242 2 0.046267 2672 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.156 12.473 6.4026 7.0163 0 0 6.9994 9.3943 6 7 0 0 7 9 1 1 0 0 1 1 446.17 19741 2531 19011 45590 52778 52778 1 TQGFLALFSGDTGEIK Unmodified 1682.8516 0.85155143 3320 Q9WTM5 Ruvbl2 RuvB-like 2 yes yes 0 0 0 0 9 0 1 87.349 87.349 3 0.0004242 30695 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.585 26.312 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 7704.6 19742 3320 19012 45591 52779 52779 1 TQGNVFATDAILATLMSCTR Unmodified 2169.0558 0.05582368 1245 O70194 Eif3d Eukaryotic translation initiation factor 3 subunit D yes yes 0 0 0 0 10 0 1 94.774 94.774 3 0.00062299 30930 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.353 25.702 0 19.892 19.365 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 2105.3 19743 1245 19013 45592 52780;52781 52781 2 TQGPYDVVVLPGGNLGAQNLSESPMVK Unmodified 2769.4007 0.40073003 2868 Q99LX0;A2A813;A2A815 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 6.67 0.471 1 2 80.686 80.686 3;4 1.1007E-17 28944 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.429 57.031 0 0 0 98.634 102.16 0 0 0 0 92 102 0 0 0 0 2 2 0 23119 19744 2868 19014 45593;45594;45595 52782;52783;52784 52783 3 TQHLHLR Unmodified 903.50388 0.50388339 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 7 0 1 26.916 26.916 3 0.043395 4251 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.335 36.185 34.005 26.95 32.836 0 0 29.848 32 28 32 0 0 28 1 1 1 0 0 1 1218.1 19745 1446 19015 45596 52785 52785 1 TQHSTLSR Unmodified 928.47264 0.47264284 1696;1197 P61264;O35526;D6RFB9;A0A0J9YUA0 Stx1b;Stx1a Syntaxin-1B;Syntaxin-1A no no 0 0 0 0 8.6 1.85 1 1 1 1 1 19.455 19.455 3 0.0011948 3162 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.41 39.883 17.005 12.678 19.64 25.902 23.67 13.101 16 13 20 25 24 13 3 2 4 3 3 2 7549.1 19746 1696;1197 19016 45597;45598;45599;45600;45601 52786;52787;52788;52789;52790 52788 5 TQIALSPNNHEVHIYK Unmodified 1862.9639 0.96389585 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 6.5 0.5 1 1 50.89 50.89 4 4.3325E-05 14881 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.427 72.453 126.99 262.14 291.58 276.64 0 157.77 120 259 296 269 0 148 1 2 2 2 0 1 27419 19747 3303 19017 45602;45603 52791;52792 52792 2 TQIDHYVGIAR Unmodified 1271.6622 0.66223452 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 8.67 3.09 1 1 1 48.173 48.173 2;3 2.4368E-12 13731 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.28 87.076 129.23 217.05 115.44 323.8 200.73 301.28 121 214 120 306 207 288 2 3 1 3 2 3 77751 19748 3192 19018 45604;45605;45606 52793;52794;52795 52794 3 TQILAASYELHK Unmodified 1372.7351 0.73506511 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8.33 3.9 1 1 1 1 1 1 58.35 58.35 3 1.8136E-13 18656 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.51 94.826 355.79 243.59 339.48 508.62 473.1 385.76 333 241 342 492 483 370 4 2 3 5 4 4 95730 19749 2148 19019 45607;45608;45609;45610;45611;45612 52796;52797;52798;52799;52800;52801;52802 52797 7 TQLASWSDPTEETGPVAGILDTETLEK Unmodified 2887.3975 0.39747837 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 13 0 1 87.415 87.415 4 0.0018543 34440 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 35.923 22.193 39.297 37.174 36.37 27.732 37.428 0 37 38 37 28 37 0 1 1 1 1 1 0 3228.7 19750 3266 19020 45613 52803 52803 1 TQLAVCQQR Unmodified 1102.5553 0.55532661 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 6.5 0.5 1 1 38.008 38.008 2 0.0032785 9742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.265 58.003 44.43 50.192 64.368 61.217 28.009 39.442 42 51 65 60 28 37 2 2 2 2 1 1 4752.9 19751 1491 19021 45614;45615 52804;52805 52804 2 TQLEELEDELQATEDAK Unmodified 1960.9113 0.91131074 1974;2696;391 Q8VDD5;A0A2R8VHF9;E9QPE7;A0A338P6K2;Q3UH59;Q61879;Q5SV64 Myh9;Myh11;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 6.67 4.5 1 1 1 82.657 82.657 3 1.1884E-25 30845 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 140.81 115.87 55.246 18.478 76.792 42.394 22.164 23.886 52 19 74 42 23 23 3 1 3 2 1 1 14257 19752 2696;391;1974 19022 45616;45617;45618 52806;52807;52808;52809 52806 4 TQLEENISQLR Unmodified 1329.6888 0.6888432 3158 Q9DCZ4 Apoo Apolipoprotein O yes yes 0 0 0 0 4.5 0.5 1 1 56.389 56.389 2 0.00037275 19312 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.138 46.353 29.904 56.949 37.019 68.839 0 0 28 56 37 65 0 0 1 2 1 2 0 0 18688 19753 3158 19023 45619;45620 52810;52811 52810 2 TQLGAIYIDASCLTWEGQQFQGK Unmodified 2613.2533 0.25333751 1705 P61971;A0A1D5RLR1 Nutf2 Nuclear transport factor 2 yes no 0 0 0 0 8 0 1 87.205 87.205 3 0.0055884 31490 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.75 24.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19754 1705 19024 45621 52812 52812 1 TQLGDCSGIGDPTHYGYSTGQPCVFIK Unmodified 2957.3324 0.33239247 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 0 6.5 0.5 1 1 69.744 69.744 4 1.1007E-17 23841 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.429 61.353 49.128 94.575 0 79.674 64.201 57.864 46 92 0 74 65 56 1 2 0 2 1 1 18196 19755 1376 19025 45622;45623 52813;52814 52814 2 TQLVSNLK Unmodified 901.52328 0.52328142 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 10.5 1.12 1 1 1 1 53.871 53.871 2;3 0.001186 14962 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.79 54.243 889.71 760.2 941.37 803.64 996.71 847.51 836 780 949 802 1016 819 2 2 2 2 3 2 184860 19756 1312 19026 45624;45625;45626;45627 52815;52816;52817;52818 52815 4 TQLVSNLKK Unmodified 1029.6182 0.61824444 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 1 11.2 1.17 2 1 1 1 50.272 50.272 2;3;4 0.00080296 10351 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.48 71.004 2407.5 1655.9 1890.8 1596.4 1947 2710.7 2262 1717 1886 1587 2013 2595 5 2 2 4 4 4 223830 19757 1312 19027 45628;45629;45630;45631;45632 52819;52820;52821;52822;52823 52822 5 TQNIIMVLK Unmodified 1058.6158 0.6158016 1121 H3BJZ7;Q4KUS2 Unc13a Protein unc-13 homolog A yes no 0 0 0 0 10 0 1 71.185 71.185 2 0.001476 21052 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.65 54.579 48.695 64.933 56.451 0 0 59.696 46 65 56 0 0 56 1 1 1 0 0 1 3656.6 19758 1121 19028 45633 52824 52824 1 TQPILDILLK Unmodified 1152.7118 0.71181048 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 11 0 1 86.687 86.687 2 0.031027 27544 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.783 11.424 0 0 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 2119.3 19759 1888 19029 45634 52825 52825 1 TQPPPKLPVGPSHK Unmodified 1481.8354 0.83544786 3380 Q9Z1P6 Ndufa7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 yes yes 0 0 0 1 9.5 0.5 1 1 43.736 43.736 4 0.0023209 9289 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.98 43.419 167.17 0 216.35 79.403 206.14 187.79 157 0 204 83 204 185 2 0 2 1 2 2 16936 19760 3380 19030 45635;45636 52826;52827;52828 52828 3 TQPTDEEMLFIYSHFK Oxidation (M) 2000.919 0.91897907 1499 P31786;M0QWU8;Q4VWZ5 Dbi Acyl-CoA-binding protein yes no 0 0 1 0 6 0 1 69.725 69.725 3 0.0074587 24632 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.131 30.189 39.701 0 0 20.767 0 29.848 37 0 0 19 0 28 1 0 0 1 0 1 2530.8 19761 1499 19031 45637 52829 52829 103 1 TQPTDEEMLFIYSHFK Unmodified 1984.9241 0.92406445 1499 P31786;M0QWU8;Q4VWZ5 Dbi Acyl-CoA-binding protein yes no 0 0 0 0 9.4 3.01 1 1 1 2 78.526 78.526 3;4 1.1449E-07 30012 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.56 91.069 285.42 544.23 535.91 404.48 376.35 446.34 268 538 527 399 380 426 4 8 5 7 4 4 140250 19762 1499 19031 45638;45639;45640;45641;45642 52830;52831;52832;52833;52834;52835;52836;52837 52837 8 TQPTSLPK Unmodified 870.48108 0.48108226 860;1464 P27546;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 7 0 1 43.425 43.425 2 0.047043 11474 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.841 30.837 29.585 36.601 46.186 27.851 0 39.442 28 37 46 28 0 37 1 1 1 1 0 1 2784.6 19763 1464;860 19032 45643 52838 52838 1 TQPVHSPPPQGEPSAPK Unmodified 1752.8795 0.87949752 74 A0A0A6YY91 Ncam1 yes yes 0 0 0 0 5 0 1 37.401 37.401 4 0.043802 9897 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 30.684 9.1264 79.032 73.407 0 0 104.08 75.914 74 74 0 0 102 74 1 1 0 0 1 1 2371.5 19764 74 19033 45644 52839 52839 1 TQPVREPSAPK Unmodified 1208.6513 0.65133548 1367;949;71 A0A0A6YY47;E9Q589;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 1 7.33 2.62 1 2 2 1 35.296 35.296 3;4 3.0709E-08 8457 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.67 94.295 782.31 665.17 1030.1 844.18 720.67 958.02 735 687 1015 824 749 918 3 4 5 5 4 5 106860 19765 71;949;1367 19034 45645;45646;45647;45648;45649;45650 52840;52841;52842;52843;52844;52845 52842 6 TQPYDVYDQVEFDVPIGSR Unmodified 2227.0433 0.043327963 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 5 0 1 77.532 77.532 3 5.6771E-06 29005 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.866 52.944 29.636 0 68.561 36.355 0 39.442 28 0 65 37 0 37 1 0 1 1 0 1 10288 19766 2754 19035 45651 52846 52846 1 TQQHYYEK Unmodified 1095.4985 0.49852324 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6 0 1 33.528 33.528 3 0.033206 7567 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.64 20.471 39.295 36.089 37.671 0 36.688 58.649 37 37 37 0 37 56 1 1 1 0 1 1 1606.4 19767 3331 19036 45652 52847 52847 1 TQQHYYER Unmodified 1123.5047 0.50467125 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 4 0 1 25.315 25.315 3 0.0021775 4850 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.804 72.023 0 0 160.14 0 165.27 0 0 0 148 0 158 0 0 0 1 0 1 0 14624 19768 2555 19037 45653 52848 52848 1 TQQLELK Unmodified 858.48108 0.48108226 461 A2AG50;A2AG51;Q8C0A6 Map7d2 MAP7 domain-containing protein 2 yes no 0 0 0 0 6 0 1 49.001 49.001 2 0.044021 14859 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.064 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19769 461 19038 45654 52849 52849 1 TQSIYDDK Unmodified 968.44509 0.44509068 1544;502 A2APL5;F6ZRK3;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 7 3.16 1 1 1 1 1 44.972 44.972 2 0.0017956 13580 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 131.22 55.091 250.13 227.83 147.05 231.88 143.88 360.47 235 231 151 222 148 342 3 2 1 3 2 4 92122 19770 502;1544 19039 45655;45656;45657;45658;45659 52850;52851;52852;52853;52854;52855 52851 6 TQSIYDDKNHR Unmodified 1375.648 0.64804102 1544;502 A2APL5;F6ZRK3;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 1 8 3.56 1 1 1 33.471 33.471 4 0.0018501 8038 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 64.55 37.141 78.72 120.86 154.27 202.94 146.23 88.025 74 121 158 195 149 84 1 2 2 2 2 2 12934 19771 502;1544 19040 45660;45661;45662 52856;52857;52858 52858 3 TQSIYDDKNHR Deamidation (N) 1376.6321 0.6320566 1544;502 A2APL5;F6ZRK3;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 1 0 1 9.5 3.5 1 1 34.489 34.489 3;4 0.0070358 8217 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.538 44.063 545.97 479.17 639.93 35.369 458.74 727.31 514 495 622 37 464 692 1 2 2 1 2 1 41858 19772 502;1544 19040 45663;45664 52859;52860 52859 130 2 TQSSGQDGRPQEEPHAEDLQK Unmodified 2336.0629 0.062894206 1044 F8WHW6;O70161;F6SMP3 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 1 2 0 1 36.432 36.432 4 8.1373E-11 10111 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.811 68.482 0 38.758 36.464 27.929 26.677 38.681 0 37 37 28 28 37 0 1 1 1 1 1 3552.8 19773 1044 19041 45665 52861 52861 1 TQSSLVPALTEFVR Unmodified 1546.8355 0.83550744 793 D5MCW4;Q9CQ89 Cuta Protein CutA yes no 0 0 0 0 10.5 2.5 1 1 78.591 78.591 3 0.0049165 30118 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.405 26.207 30.044 0 0 40.121 45.313 58.403 28 0 0 37 47 56 1 0 0 1 2 2 9492.7 19774 793 19042 45666;45667 52862;52863 52863 2 TQSTVENLSK Unmodified 1105.5615 0.56151742 583 B1ASZ3;Q64516;Q8C635 Gyk;Gk;Gykl1 Glycerol kinase yes no 0 0 0 0 5 0 1 44.891 44.891 3 0.0021537 13501 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.267 38.062 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19775 583 19043 45668 52864 52864 1 TQSVLKEPEPTDTTTYK Unmodified 1936.963 0.96295238 2419 Q8BK30 Ndufv3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial yes yes 0 0 0 1 6.5 0.5 1 1 52.447 52.447 3;4 0.00041792 15697 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.98 41.491 0 96.446 149.88 100.36 116.63 124.59 0 93 148 102 120 120 0 1 1 1 1 1 14988 19776 2419 19044 45669;45670 52865;52866 52866 2 TQTAIASEDMPNTLTEAEK Unmodified 2048.9572 0.95721507 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 3.33 0.471 2 1 61.669 61.669 3;4 5.9058E-14 21967 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 118.37 93.182 0 97.247 102 164.84 35.986 28.821 0 93 102 157 37 28 0 3 2 3 1 1 24536 19777 2148 19045 45671;45672;45673 52867;52868;52869 52868 3 TQTAVASEEGPATLPEAEALLAQHAALR Unmodified 2844.4618 0.46175038 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4.33 0.471 2 1 73.679 73.679 3;4 3.8883E-08 26944 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.533 48.232 50.339 47.524 55.756 57.992 141.13 46.615 47 47 56 57 139 47 2 2 2 3 3 2 28686 19778 2186 19046 45674;45675;45676 52870;52871;52872;52873;52874 52870 5 TQTAVVQR Unmodified 901.49813 0.49812931 2059 Q5SS83;Q60634 Flot2 Flotillin-2 yes no 0 0 0 0 9 4 1 1 29.655 29.655 2 0.010928 6420 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.502 54.072 48.889 44.956 105.02 53.792 61.479 117.64 46 47 102 56 65 112 1 2 2 2 2 2 7920.2 19779 2059 19047 45677;45678 52875;52876 52876 2 TQTEGPR Unmodified 787.38243 0.38243085 817 E9PUL5 Prrt2 Proline-rich transmembrane protein 2 yes yes 0 0 0 0 13 0 1 21.13 21.13 2 0.020111 3093 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.01 48.226 22.405 0 21.563 23.476 20.065 23.945 21 0 21 23 21 23 1 0 1 1 1 1 2415.5 19780 817 19048 45679 52877 52877 1 TQTPSETR Unmodified 918.44067 0.44067401 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 6.67 4.5 1 1 1 23.163 23.163 2 0.010928 4213 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.502 57.943 49.126 0 38.996 17.749 45.898 28.795 46 0 37 19 46 28 1 0 1 1 2 1 9281.2 19781 3285 19049 45680;45681;45682 52878;52879;52880 52878 3 TQVEVYSFPEDPVIK Unmodified 1749.8825 0.88251721 1487 Q3UPN1;P29533 Vcam1 Vascular cell adhesion protein 1 yes no 0 0 0 0 5 0 1 73.35 73.35 3 0.0066271 26929 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.14 23.889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19782 1487 19050 45683 52881 52881 1 TQVHEGR Unmodified 825.40931 0.4093143 611 E9PZ16;B1B0C7;Q05793 Hspg2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes no 0 0 0 0 4 0 1 16.71 16.71 3 0.0071349 2372 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.191 69.469 8.5153 7.856 4.8957 0 0 9.594 8 8 5 0 0 9 1 1 1 0 0 1 1368.5 19783 611 19051 45684 52882 52882 1 TQVQSVIDK Unmodified 1016.5502 0.55022446 1870 Q00623 Apoa1 Apolipoprotein A-I;Proapolipoprotein A-I;Truncated apolipoprotein A-I yes yes 0 0 0 0 6.5 0.5 1 1 51.237 51.237 2 0.00029726 15052 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 128.81 60.076 39.701 0 0 39.772 35.555 38.427 37 0 0 37 37 37 1 0 0 1 1 1 2607.5 19784 1870 19052 45685;45686 52883;52884 52884 2 TQVTELEDELTAAEDAK Unmodified 1861.8793 0.87928233 1149 Q6URW6;K3W4R2 Myh14 Myosin-14 yes no 0 0 0 0 3 0 1 78.927 78.927 3 9.3641E-09 29840 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.157 63.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19785 1149 19053 45687 52885 52885 1 TQVVHESFQGR Unmodified 1286.6367 0.63674805 19 A0A087WPR1;P20917;Q3ZB60;A0A087WRD6 Mag Myelin-associated glycoprotein yes no 0 0 0 0 6 0.816 1 1 1 36.123 36.123 3 6.9009E-06 8797 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.71 76.37 69.468 54.9 37.012 137.66 174.5 125.86 65 56 37 130 177 121 1 1 1 2 3 2 19711 19786 19 19054 45688;45689;45690 52886;52887;52888 52887 3 TQYEAVATSNMQETEEWYR Unmodified 2335.0063 0.0062905295 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 3.5 0.5 1 1 66.251 66.251 3 5.4177E-58 23672 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 176.42 163.87 29.904 35.224 20.198 36.507 28.916 0 28 35 19 35 28 0 1 2 1 3 1 0 22679 19787 1304 19055 45691;45692 52889;52890;52891 52891 3 TQYSSAMLESLLPGIR Unmodified 1764.908 0.90802046 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 13 0 1 84.967 84.967 3 0.00064368 33309 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 54.368 31.49 39.406 0 49.573 0 0 0 37 0 46 0 0 0 1 0 1 0 0 0 5587.7 19788 1899 19056 45693 52892 52892 1 TQYVHSPYDRPGWNPR Unmodified 1971.934 0.93399271 992 F6SEU4;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 1 8 0 1 43.647 43.647 4 0.025807 10928 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.613 18.774 29.717 6.7494 49.217 0 18.538 38.913 28 9 46 0 19 37 1 1 1 0 1 1 1757.8 19789 992 19057 45694 52893 52893 1 TREEIQEVR Unmodified 1158.5993 0.59929991 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 3 0 2 31.612 31.612 2;3 0.00041378 8081 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.53 59.01 0 245.78 28.609 235.01 315.59 303.59 0 231 28 222 322 292 0 2 1 3 3 2 99419 19790 1520 19058 45695;45696 52894;52895;52896 52894 3 TRPDGNCFYR Unmodified 1284.567 0.56695393 2293 Q7TQI3;D3YWF6;D3Z7K0 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 1 13 0 1 34.939 34.939 3 0.0067273 8960 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.232 49.966 167.08 0 232.05 188.37 0 88.478 157 0 223 185 0 83 2 0 2 2 0 1 11472 19791 2293 19059 45697 52897;52898 52897 2 TRPGAVSPLNSPLSTTFPSPFGK Unmodified 2357.2379 0.23794545 1894 Q0KL02;A0A2I3BQT2 Trio Triple functional domain protein yes no 0 0 0 1 11 0 1 73.583 73.583 3 0.0079715 21647 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.702 23.883 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19792 1894 19060 45698 52899 52899 1 TRQELDATK Unmodified 1060.5513 0.55128709 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 1 13 0 1 33.617 33.617 3 0.034196 8337 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.293 22.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19793 2249 19061 45699 52900 52900 1 TSAALSTMGSAISR Unmodified 1351.6766 0.67656396 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 0 8 0 1 55.469 55.469 3 0.0016499 16460 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 54.501 22.086 48.878 55.73 33.414 68.011 55.452 0 46 56 37 65 56 0 1 1 1 1 1 0 2723.2 19794 524 19062 45700 52901 52901 1 TSAAPGGVPLQPQDLEFTK Unmodified 1955 6.5850998E-06 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 7.67 2.98 2 3 1 1 2 72.011 72.011 2;3;4 5.5954E-12 26301 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.98 93.824 349.22 512.72 387.04 209.93 400.91 455.01 329 514 385 205 399 436 6 11 7 6 6 7 162280 19795 3117 19063 45701;45702;45703;45704;45705;45706;45707;45708;45709 52902;52903;52904;52905;52906;52907;52908;52909;52910;52911;52912 52902 11 TSAASPPVVPSAEQPRPIVEEELSK Unmodified 2617.3599 0.35991107 766 D3Z3A0;Q9DCL8 Ppp1r2 Protein phosphatase inhibitor 2 yes no 0 0 0 1 4.5 0.5 1 1 62.129 62.129 4 3.926E-16 21711 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.052 57.18 39.044 94.762 93.126 36.317 102.41 75.962 37 93 93 37 102 74 1 2 2 1 2 2 8764 19796 766 19064 45710;45711 52913;52914 52914 2 TSACGLFSVCYPR Unmodified 1516.6803 0.68026913 2272 Q76MZ3;Q3TTF6;H3BKU1;G3UWS4;Q7TNP2;H3BLQ0;H3BLE7 Ppp2r1a;Ppp2r1b Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform yes no 0 0 0 0 10 1.87 1 1 1 1 65.075 65.075 2;3 3.7841E-13 18183 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.24 101.15 148.24 71.244 193.24 123.1 300.66 248.33 139 74 186 120 301 241 2 1 3 2 4 4 47694 19797 2272 19065 45712;45713;45714;45715 52915;52916;52917;52918 52917 4 TSAGTTDPEEATR Unmodified 1334.595 0.5950024 706 D3YWN7;E9QMU3;O88735 Map7 Ensconsin yes no 0 0 0 0 1.5 0.5 1 1 32.061 32.061 2 1.1084E-14 7704 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.2 97.865 0 29.134 39.368 0 9.414 0 0 28 38 0 9 0 0 2 2 0 1 0 7168.3 19798 706 19066 45716;45717 52919;52920 52919 2 TSAHYEENK Unmodified 1077.4727 0.47270242 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 4 0 1 29.526 29.526 3 0.00053828 6702 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.649 58.956 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4541.1 19799 2282;2057 19067 45718 52921 52921 1 TSALTQGLER Acetyl (Protein N-term) 1116.5775 0.57750184 2530 Q8CF66 Lamtor4 Ragulator complex protein LAMTOR4;Ragulator complex protein LAMTOR4, N-terminally processed yes yes 1 0 0 0 2.5 0.5 1 1 58.888 58.888 2 0.0021225 20682 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 51.066 36.653 0 29.511 16.832 19.604 8.5135 0 0 28 18 19 9 0 0 1 1 1 1 0 4890.4 19800 2530 19069 45719;45720 52922;52923 52923 2 TSAPITCELLNK Unmodified 1345.6912 0.69115139 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 64.874 64.874 3 2.0304E-05 22313 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.182 53.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19801 3204 19070 45721 52924 52924 1 TSASIGSLCADAR Unmodified 1307.614 0.6139637 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 7.29 3.65 1 1 1 1 1 1 1 48.39 48.39 2;3 1.6197E-121 15233 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 249.22 196.82 506.13 345.91 651.68 282.54 1004.9 532.73 476 347 631 287 988 515 5 6 7 5 7 5 471730 19802 1666 19071 45722;45723;45724;45725;45726;45727;45728 52925;52926;52927;52928;52929;52930;52931;52932;52933;52934 52933 10 TSASIILR Unmodified 859.51272 0.51271674 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 11 2 1 1 49.1 49.1 2 0.011746 15745 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.187 45.385 98.379 376 278.82 0 357.4 161.81 93 364 279 0 347 158 1 2 2 0 2 1 20243 19803 1356 19072 45729;45730 52935;52936 52936 2 TSATWFALSR Unmodified 1138.5771 0.57710791 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 11.3 1.25 1 1 1 65.329 65.329 2 1.9023E-08 18437 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.88 98.601 187.56 398.11 759.43 553.14 457.79 549.78 176 395 762 545 480 528 1 2 3 2 2 2 115610 19804 2699 19074 45731;45732;45733 52937;52938;52939 52937 3 TSCEFTGDILR Unmodified 1297.5973 0.597251 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 7.33 4.03 1 1 1 58.836 58.836 2 3.1976E-08 20343 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.03 68.127 157.54 65.311 156.65 191.15 149.53 78.884 148 65 157 186 148 74 3 1 3 3 2 1 41371 19805 1741 19075 45734;45735;45736 52940;52941;52942 52942 3 TSCTTESTGLDR Unmodified 1326.5722 0.57215846 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 3.5 0.5 1 1 34.061 34.061 2 3.1662E-32 9222 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 181.53 100.74 0 24.091 22.82 32.942 0 24.518 0 23 23 33 0 23 0 1 1 2 0 1 8774.1 19806 3192 19076 45737;45738 52943;52944 52943 2 TSDETLLEDAIEVCK Unmodified 1721.8029 0.80294626 3226 Q9JKB1;A0A2I3BQ39 Uchl3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 0 0 0 0 4 0 1 78.012 78.012 3 2.5669E-05 29103 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.11 80.016 0 50.008 0 0 46.771 39.173 0 47 0 0 46 38 0 1 0 0 1 1 4108.9 19807 3226 19077 45739 52945 52945 1 TSDETLLEDAIEVCKK Unmodified 1849.8979 0.89790928 3226 Q9JKB1;A0A2I3BQ39 Uchl3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 yes no 0 0 0 1 4 0 1 72.566 72.566 4 0.0023083 26492 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.545 36.43 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 2610.1 19808 3226 19078 45740 52946 52946 1 TSDLIVLGLPWK Unmodified 1340.7704 0.77038799 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WQA5;A0A087WR97;A0A087WSE4 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 10.7 1.7 1 1 1 89.76 89.76 2;3 4.1666E-05 29050 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.441 61.326 0 8.9363 38.267 36.913 94.585 75.041 0 9 37 37 93 74 0 1 1 2 3 2 27524 19809 2793 19079 45741;45742;45743 52947;52948;52949;52950;52951 52948 5 TSDVETMSSQSALALDER Unmodified 1938.8841 0.88405013 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6.67 4.5 1 1 1 59.565 59.565 3 2.3617E-35 21131 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 147.92 108.23 20.195 85.036 160.48 62.87 99.142 135.75 19 83 157 65 102 130 1 2 2 1 2 2 30031 19810 1382 19080 45744;45745;45746 52952;52953;52954 52952 3 TSDVETMSSQSALALDER Oxidation (M) 1954.879 0.87896475 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 1 0 3 0 1 51.345 51.345 3 1.2644E-09 17310 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 78.021 61.142 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19811 1382 19080 45747 52955 52955 85 1 TSEAADDSFR Unmodified 1097.4625 0.46253166 2720 Q8VHY0 Cspg4 Chondroitin sulfate proteoglycan 4 yes yes 0 0 0 0 2 0 1 37.011 37.011 2 0.0012756 10447 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.658 38.492 0 8.9294 38.676 18.462 0 0 0 9 37 19 0 0 0 1 1 1 0 0 1649.7 19812 2720 19081 45748 52956 52956 1 TSEAEDIFIPVLNIK Unmodified 1687.9033 0.90325265 2415 Q8BIW1 Prune Protein prune homolog yes yes 0 0 0 0 6.5 0.5 1 1 89.025 89.025 3 3.8054E-05 32828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.889 56.631 20.27 0 19.607 19.064 28.412 0 19 0 19 19 28 0 1 0 1 1 1 0 2194.3 19813 2415 19082 45749;45750 52957;52958 52958 2 TSEEGDFR Unmodified 939.39339 0.39338946 3092 Q9D8B7 Jam3 Junctional adhesion molecule C yes yes 0 0 0 0 1.5 0.5 1 1 33.934 33.934 2 0.0075174 8424 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.25 74.531 59.862 74.7 0 79.564 70.084 106.73 56 74 0 74 74 102 1 2 0 2 2 2 28062 19814 3092 19083 45751;45752 52959;52960 52959 2 TSEEQAEAK Unmodified 991.44582 0.44581896 3203 Q9JHK4 Rabggta Geranylgeranyl transferase type-2 subunit alpha yes yes 0 0 0 0 2 0 1 32.056 32.056 2 0.0048254 8023 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 85.533 37.71 0 69.16 0 79.696 63.036 37.643 0 65 0 74 65 37 0 1 0 1 1 1 2493.3 19815 3203 19084 45753 52961 52961 1 TSEFMPYVVFIAAPELETLR Unmodified 2312.1763 0.17625639 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 8 0 1 103.69 103.69 3 3.2273E-09 36310 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.674 54.136 12.848 5.5177 0 0 2.8113 9.5138 12 6 0 0 3 9 1 1 0 0 1 1 1528.6 19816 3241 19085 45754 52962 52962 1 TSEGSWEPFASGK Unmodified 1381.615 0.61500956 1319 P07309 Ttr Transthyretin yes yes 0 0 0 0 7 0 1 62.246 62.246 3 0.015311 20280 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.115 23.558 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19817 1319 19086 45755 52963 52963 1 TSEIQGANQLLELFDLGK Unmodified 1975.0262 0.026221336 3099 Q9D967 Mdp1 Magnesium-dependent phosphatase 1 yes yes 0 0 0 0 8 0 1 97.24 97.24 3 3.7753E-05 34912 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.83 47.549 0 9.2558 19.152 19.104 27.742 19.462 0 9 19 19 28 19 0 1 1 1 1 1 3478.9 19818 3099 19087 45756 52964 52964 1 TSELEEQLSAEK Unmodified 1362.6515 0.65145464 641 B9EJA2 Cttnbp2 Cortactin-binding protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 59.058 59.058 2;3 0.00020334 20843 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.76 41.535 20.069 38.443 38.015 18.501 0 59.696 19 38 37 19 0 56 1 2 1 1 0 2 3298.8 19819 641 19088 45757;45758 52965;52966 52965 2 TSEQYETLLIETASSLVK Unmodified 2011.0361 0.03611732 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 9.33 2.62 1 1 1 96.222 96.222 3 1.7866E-05 34699 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.995 50.078 52.515 5.4226 5.8254 46.652 0 39.442 49 6 6 43 0 37 2 1 1 2 0 2 8846.5 19820 692 19089 45759;45760;45761 52967;52968;52969 52968 3 TSESPAR Unmodified 746.35588 0.35588174 282 Q6PDL0;A0A1D5RM94 Dync1li2 Cytoplasmic dynein 1 light intermediate chain 2 yes no 0 0 0 0 2.5 0.5 1 1 20.208 20.208 2 0.019609 3135 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 107.67 54.51 64.072 29.792 51.832 67.956 70.889 86.455 60 28 51 65 69 83 1 1 1 1 1 2 9955.9 19821 282 19090 45762;45763 52970;52971 52971 2 TSETSYLNEAFSFYSAIR Unmodified 2084.9691 0.96910039 2511 Q8C8N2;A0A0N4SVJ6 Scai Protein SCAI yes no 0 0 0 0 8 0 1 88.582 88.582 3 0.0086602 32096 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.348 22.604 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1277.4 19822 2511 19091 45764 52972 52972 1 TSEVDLAKPLVK Unmodified 1298.7446 0.74456717 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 1 7 0 1 58.871 58.871 3 0.022437 18757 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.627 33.684 98.825 70.361 102.39 73.094 89.615 125.36 93 74 102 74 93 120 1 1 1 1 1 1 4784.7 19823 3327 19092 45765 52973 52973 1 TSEVNCYR Unmodified 1027.4393 0.4392938 136 A0A0N4SVS6;P53996 Cnbp Cellular nucleic acid-binding protein yes no 0 0 0 0 4 0 1 33.495 33.495 2 0.048601 8439 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.207 18.489 39.468 46.283 0 0 67.99 0 37 46 0 0 65 0 1 1 0 0 1 0 5979 19824 136 19093 45766 52974 52974 1 TSEVQDLQDEVQR Unmodified 1545.7271 0.7270792 1006 F6W2Q5;Q5JC28;H3BK65;P42567;A0A0R4J0A0 Eps15 Epidermal growth factor receptor substrate 15 yes no 0 0 0 0 3 0 1 52.804 52.804 3 0.020498 17974 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.378 19.747 20.215 0 28.908 28.881 0 0 19 0 28 28 0 0 1 0 1 1 0 0 3274 19825 1006 19094 45767 52975 52975 1 TSFDEMLPGTHFQR Unmodified 1664.7617 0.76169057 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 6 0 1 61.657 61.657 3 0.0011889 20840 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 58.831 43.286 49.176 36.052 0 0 56.948 47.411 46 37 0 0 56 46 1 1 0 0 1 1 4325.6 19826 2074 19095 45768 52976 52976 1 TSFEEGTGECEVFSK Unmodified 1705.7141 0.71413125 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 3.5 0.5 1 1 61.559 61.559 2;3 0.0017861 21683 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.395 42.159 20.387 0 0 30.604 0 48.848 19 0 0 28 0 47 1 0 0 1 0 2 3863.5 19827 1581 19096 45769;45770 52977;52978 52978 2 TSFFHVK Unmodified 864.44939 0.4493882 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 0 7.67 4.78 1 1 1 52.202 52.202 3 0.0056295 12452 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.323 55.102 448.36 335.5 462.35 412.77 356.76 392.77 422 351 465 409 370 378 3 3 3 3 2 2 60026 19828 1836 19097 45771;45772;45773 52979;52980;52981 52980 3 TSFFQALGITTK Unmodified 1312.7027 0.70270235 1381 P14869;S4R1N1 Rplp0 60S acidic ribosomal protein P0 yes no 0 0 0 0 5.57 5.29 4 1 2 83.159 83.159 2;3 4.4652E-24 29047 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 147.33 113.14 138.8 244.99 272.35 330.13 190.16 248.92 130 238 269 316 190 237 4 6 7 9 6 7 163200 19829 1381 19098 45774;45775;45776;45777;45778;45779;45780 52982;52983;52984;52985;52986;52987;52988;52989;52990;52991;52992;52993;52994 52990 13 TSFHALTSILK Unmodified 1216.6816 0.68157298 2957 Q9CR62;Q5SX46;Q5SX48 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes no 0 0 0 0 11 0 1 64.974 64.974 2 0.011804 17736 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.592 18.16 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19830 2957 19099 45781 52995 52995 1 TSFLDDAFRK Unmodified 1198.5982 0.59823728 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 9 0 1 63.56 63.56 3 0.0066725 19604 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.005 42.218 98.982 0 135.55 103.41 0 148.17 93 0 130 102 0 139 1 0 1 1 0 1 8734.9 19831 3204 19100 45782 52996 52996 1 TSGAPPESNPSDVK Unmodified 1384.647 0.64703797 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 7.33 4.03 1 1 1 40.745 40.745 3 9.6691E-05 12068 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.889 49.638 0 69.16 70.33 0 161.63 105.79 0 65 65 0 158 102 0 2 1 0 4 3 17311 19832 20;2354 19101 45783;45784;45785 52997;52998;52999;53000 52998 4 TSGNQDEILVIR Unmodified 1343.7045 0.70449327 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 6.2 3.54 1 1 1 1 1 56.42 56.42 2 1.8094E-23 19199 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 170.04 118.97 119.3 236.99 266.34 310.17 182.73 164.33 112 232 268 301 187 157 4 6 5 6 4 3 156580 19833 118;1534 19102 45786;45787;45788;45789;45790 53001;53002;53003;53004;53005;53006;53007 53005 7 TSGNQDEILVIR Deamidation (N) 1344.6885 0.68850885 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 1 0 0 3.67 0.471 1 2 59.745 59.745 2;3 8.8835E-12 21586 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.1 90.161 39.564 46.124 0 49.079 27.906 0 37 47 0 47 28 0 1 2 0 2 1 0 8802.9 19834 118;1534 19102 45791;45792;45793 53008;53009;53010 53010 58 3 TSGQTSANAHSSR Unmodified 1302.5913 0.59125442 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 4.5 0.5 1 1 14.522 14.522 3 1.0625E-05 2259 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.55 92.757 2.146 0 0 2.1301 2.9698 2.0473 2 0 0 2 3 2 1 0 0 1 1 1 1020.7 19835 810 19103 45794;45795 53011;53012 53011 2 TSGSKPAADIR Unmodified 1101.5778 0.57783619 1072 Q8BLQ9;G3UZM4 Cadm2 Cell adhesion molecule 2 yes no 0 0 0 1 7 0 1 33.876 33.876 3 0.017173 7012 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.569 30.829 123.13 82.737 155.06 109.92 115.17 154.48 116 88 153 111 120 148 1 1 1 1 1 1 15390 19836 1072 19104 45796 53013 53013 1 TSGSSIK Unmodified 678.35482 0.35481911 1637 P56382 Atp5e ATP synthase subunit epsilon, mitochondrial yes yes 0 0 0 0 8 0 1 33.502 33.502 2 0.028698 6381 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.323 49.084 63.854 104.22 0 93.683 132.95 84.684 60 102 0 88 134 83 1 1 0 1 1 1 11303 19837 1637 19105 45797 53014 53014 1 TSGTVEDDLIIFPDDCEFK Unmodified 2199.9882 0.98818085 53 Q9JKV1;A0A0A6YVU8;D3YUD8 Adrm1;Gm9774 Proteasomal ubiquitin receptor ADRM1 yes no 0 0 0 0 3 0 1 84.445 84.445 3 7.7533E-06 31162 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.779 45.579 5.3228 4.9122 2.9244 0 6.276 0 5 5 3 0 6 0 1 1 1 0 1 0 729.52 19838 53 19106 45798 53015 53015 1 TSGVVQGVASVAEK Unmodified 1330.7092 0.70924429 2788 Q91ZZ3 Sncb Beta-synuclein yes yes 0 0 0 0 7.25 2.33 1 3 2 1 1 58.17 58.17 2;3;4 1.3753E-80 19976 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 216.34 154.78 962.86 701.01 1045.8 876.43 1084.8 1342.1 905 732 1033 863 1096 1288 6 6 7 5 3 8 452550 19839 2788 19107 45799;45800;45801;45802;45803;45804;45805;45806 53016;53017;53018;53019;53020;53021;53022;53023;53024 53024 9 TSIAIDTIINQK Unmodified 1315.7347 0.73473076 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8.11 3.18 1 3 1 1 1 1 1 70.818 70.818 2;3 2.3501E-40 24370 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 196.76 124.12 709.59 718.24 982.14 873.44 940.13 902.95 667 721 970 861 954 865 7 8 8 9 10 7 657860 19840 1881 19108 45807;45808;45809;45810;45811;45812;45813;45814;45815 53025;53026;53027;53028;53029;53030;53031;53032;53033;53034;53035;53036;53037;53038 53027 14 TSIAIDTIINQK Deamidation (N) 1316.7187 0.71874635 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 0 6.67 0.471 1 2 70.927 70.927 2;3 9.3454E-08 24674 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.7 49.155 129.44 83.985 45.815 87.2 100.03 77.353 121 83 47 84 102 74 3 2 2 3 3 2 13257 19841 1881 19108 45816;45817;45818 53039;53040;53041;53042 53039 770 4 TSIDAYDNFDNISLAQR Unmodified 1941.9068 0.90683448 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.75 3.63 1 2 1 71.017 71.017 2;3;4 2.6917E-42 25822 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 162.59 119.64 188.61 62.88 192.64 145.22 243.15 127.19 177 65 186 139 241 122 4 2 5 4 5 4 121690 19842 2185 19109 45819;45820;45821;45822 53043;53044;53045;53046;53047;53048 53045 6 TSIDAYDNFDNISLAQR Deamidation (N) 1942.8909 0.89085007 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 5 0 1 73.636 73.636 3 0.001851 27116 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.966 27.829 9.4048 28.858 17.925 19.183 27.409 29.066 9 28 19 19 28 28 1 1 1 1 1 1 3054.9 19843 2185 19109 45823 53049 53049 875 1 TSIEDQDELSSLLQVPLVAGTVNR Unmodified 2583.3392 0.33917563 1239 O55135 Eif6 Eukaryotic translation initiation factor 6 yes yes 0 0 0 0 6 0 1 92.942 92.942 3 0.00048997 35196 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.645 31.457 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19844 1239 19110 45824 53050 53050 1 TSIPVLTSFGAR Unmodified 1247.6874 0.68738664 573 B1AQX9;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 10 0 1 69.997 69.997 2 0.00020028 20581 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.596 23.344 128.61 30.696 0 89.695 54.456 0 120 37 0 83 56 0 1 1 0 1 1 0 10531 19845 573 19111 45825 53051 53051 1 TSISGNWK Unmodified 891.44503 0.4450311 2173;2568 Q64332;Q8JZP2 Syn2;Syn3 Synapsin-2;Synapsin-3 no no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 51.094 51.094 2;3 0.00029559 13697 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 155.82 9.9347 2981.8 1386.6 3427.8 2711.2 1545.6 3609.1 2804 1416 3368 2694 1592 3427 5 3 5 6 3 6 445450 19846 2173;2568 19112 45826;45827;45828;45829;45830;45831 53052;53053;53054;53055;53056;53057 53054 6 TSKAEELLAEEK Unmodified 1346.6929 0.69292553 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 1 5.5 0.5 1 1 58.255 58.255 3 0.00036837 20114 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.53 44.896 69.129 33.449 132.85 122.43 101.07 0 65 37 130 121 102 0 1 1 2 2 2 0 6785.1 19847 815;2590 19113 45832;45833 53058;53059 53058 2 TSLAPIIVFVK Unmodified 1186.7325 0.73254592 403 A0A2U3TZ49;D3Z3Z3;P54285 Cacnb3 Voltage-dependent L-type calcium channel subunit beta-3 yes no 0 0 0 0 11.5 0.5 1 1 84.164 84.164 3 0.0020112 26299 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.342 40.013 59.756 18.848 39.835 0 28.291 29.041 56 19 37 0 28 28 2 1 1 0 1 1 10192 19848 403 19114 45834;45835 53060;53061 53060 2 TSLAPIIVHVK Unmodified 1176.723 0.72304386 1140 J3QK20;Q8R0S4 Cacnb4 Voltage-dependent L-type calcium channel subunit beta-4 yes no 0 0 0 0 10 0 1 60.43 60.43 3 0.0010426 16289 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.289 47.018 138.17 96.888 138.97 110.47 136.72 104.83 130 102 139 111 139 102 1 1 1 1 1 1 11846 19849 1140 19115 45836 53062 53062 1 TSLAPIIVYIK Unmodified 1216.7431 0.7431106 200 A2A542;A2A545;A2A543;A0A0R4J194;Q8R3Z5 Cacnb1 Voltage-dependent L-type calcium channel subunit beta-1 yes no 0 0 0 0 11 0 1 81.405 81.405 2 1.5201E-07 25244 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.66 70.645 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8600 19850 200 19116 45837 53063 53063 1 TSLAPIIVYVK Unmodified 1202.7275 0.72746054 646 C7IVS7;Q8CC27 Cacnb2 Voltage-dependent L-type calcium channel subunit beta-2 yes no 0 0 0 0 10.5 0.5 1 1 77.144 77.144 2 0.00063591 23202 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.838 69.409 49.074 56.275 0 30.604 0 49.036 46 56 0 28 0 46 2 2 0 1 0 1 4673.8 19851 646 19117 45838;45839 53064;53065 53065 2 TSLDLYANVIHCK Unmodified 1532.7657 0.76571331 1814 P70404 Idh3g Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial yes yes 0 0 0 0 9 0 1 64.023 64.023 3 0.011076 19735 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.436 17.407 138.88 0 102.86 152.77 152.29 173.68 130 0 102 148 158 167 1 0 1 1 1 1 23030 19852 1814 19118 45840 53066 53066 1 TSLGPNGLDK Deamidation (N) 1001.5029 0.50293991 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 1 0 0 5.5 0.5 1 1 53.701 53.701 2 0.00021119 17722 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.88 100.96 119.83 0 57.762 116.58 127.01 105.11 112 0 56 112 130 102 2 0 1 2 2 2 13360 19853 1825 19119 45841;45842 53067;53068 53067 742 2 TSLMNQYVNK Unmodified 1196.586 0.58595803 1600 P51150;A0A0N4SVG9;A0A0N4SVR6 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 9 0 1 57.409 57.409 2 0.00060398 16692 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.502 54.313 0 0 20.558 0 38.702 0 0 0 19 0 37 0 0 0 1 0 1 0 3155.4 19854 1600 19120 45843 53069 53069 1 TSLPPISPGR Unmodified 1023.5713 0.57129425 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2 Dlg2 Disks large homolog 2 yes no 0 0 0 0 8 0 1 50.075 50.075 2 0.0051711 13838 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.17 21.058 29.691 0 59.323 25.126 103.26 66.343 28 0 56 28 102 65 1 0 1 1 1 1 10107 19855 690 19121 45844 53070 53070 1 TSLPWQGLK Unmodified 1028.5655 0.56548059 834 H7BXB1;E9Q4G7;E9PWB2;Q8BK63;E9Q2U6;E9Q3W1;F6YBC9 Csnk1a1 Casein kinase I isoform alpha yes no 0 0 0 0 10 0 1 67.467 67.467 3 0.035536 19317 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 47.96 26.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19856 834 19122 45845 53071 53071 1 TSLQQPGPK Unmodified 954.51345 0.51344502 3285 Q9QYX7 Pclo Protein piccolo yes yes 0 0 0 0 7 0 1 40.793 40.793 3 0.001739 10254 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.827 46.572 69.285 39.28 44.018 68.422 0 59.696 65 42 46 65 0 56 1 1 1 1 0 1 4771.3 19857 3285 19123 45846 53072 53072 1 TSLSLPAPAIR Unmodified 1124.6554 0.65535823 2835 Q99JY8 Ppap2b Lipid phosphate phosphohydrolase 3 yes yes 0 0 0 0 8 0 1 61.403 61.403 2 5.8072E-08 19230 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.12 73.693 88.544 0 86.511 63.937 103.75 0 83 0 83 65 102 0 1 0 1 1 1 0 8657.8 19858 2835 19124 45847 53073 53073 1 TSLSPGSGVVTYYLR Unmodified 1598.8304 0.83042206 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 9 0 1 68.58 68.58 2 0.00013999 21970 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.881 46.552 0 0 29.473 18.476 28.439 0 0 0 28 19 28 0 0 0 1 1 1 0 3461.9 19859 1472 19125 45848 53074 53074 1 TSLTLLDLIWLEK Unmodified 1543.8861 0.88614603 1302 P03921 Mtnd5 NADH-ubiquinone oxidoreductase chain 5 yes yes 0 0 0 0 10 0 1 103.77 103.77 3 2.0721E-09 33370 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.01 84.783 12.876 0 0 0 0 15.99 12 0 0 0 0 15 1 0 0 0 0 1 1820.4 19860 1302 19126 45849 53075 53075 1 TSLVIVESTDDQSQVFER Unmodified 2052.0011 0.0011287971 3449;3451 S4R2F3;Q8C8R3;S4R2R5 Ank2 Ankyrin-2 no no 0 0 0 0 4 0 1 69.089 69.089 3 0.0019562 24942 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.116 32.631 0 29.478 18.789 0 29.288 0 0 28 19 0 28 0 0 1 1 0 1 0 2470.7 19861 3449;3451 19127 45850 53076 53076 1 TSLYLVQSLPGISR Unmodified 1532.8562 0.85624288 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 11 0 1 76.332 76.332 3 0.00011515 22752 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.373 35.994 0 29.792 0 39.747 36.876 0 0 28 0 37 37 0 0 1 0 1 1 0 10281 19862 343 19128 45851 53077 53077 1 TSMESLIHHFK Unmodified 1328.6547 0.6547063 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 58.46 58.46 4 0.00023284 17072 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.298 62.506 108.77 51.073 70.372 257.88 71.131 138.58 102 56 74 241 74 130 1 1 1 2 1 1 16851 19863 2754 19129 45852;45853 53078;53079 53079 2 TSMLSPK Unmodified 762.39458 0.39457544 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 9 0 1 48.376 48.376 2 0.03134 12332 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.212 24.424 0 0 150.4 0 93.965 96.457 0 0 139 0 93 93 0 0 1 0 1 1 7509.1 19864 3174 19130 45854 53080 53080 1 TSMNVNEIFMAIAK Unmodified 1567.7738 0.77383516 2921 Q9CQD1 Rab5a Ras-related protein Rab-5A yes yes 0 0 0 0 10.7 1.7 1 1 1 88.166 88.166 3 9.3374E-05 28388 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.837 8.0616 48.978 75.433 19.261 119.59 89.367 100.85 46 74 19 112 94 97 2 2 1 3 3 3 9026.7 19865 2921 19131 45855;45856;45857 53081;53082;53083 53082 3 TSPASGTGAAAR Unmodified 1045.5152 0.51523593 2495 Q8C3Q5 Shisa7 Protein shisa-7 yes yes 0 0 0 0 7 3.54 1 1 1 1 25.34 25.34 2 9.0725E-05 4424 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.309 27.14 35.19 27.19 52.457 48.245 0 0 33 28 51 47 0 0 2 2 2 2 0 0 3965.4 19866 2495 19132 45858;45859;45860;45861 53084;53085;53086;53087 53085 4 TSPCQSPTVPEYSAPSLPIRPSR Unmodified 2526.2537 0.25367186 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;A0A338P6C7;F6VSS8 Synj1 Synaptojanin-1 yes no 0 0 0 1 6.5 0.5 1 1 58.465 58.465 3;4 3.1974E-09 19349 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.422 47.141 78.724 45.707 75.185 44.734 85.809 0 74 46 74 46 84 0 2 1 1 1 2 0 9466.5 19867 927 19133 45862;45863 53088;53089 53088 2 TSPDLVPMGDWTSR Unmodified 1560.7242 0.72424243 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 5 0 1 69.585 69.585 3 0.0016267 25180 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.546 36.515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19868 1401 19134 45864 53090 53090 1 TSPDTLR Unmodified 788.40283 0.40283194 2145 Q62093 Srsf2 Serine/arginine-rich splicing factor 2 yes yes 0 0 0 0 4.5 0.5 1 1 32.734 32.734 2 0.0079217 7614 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.84 53.327 99.003 80.003 97.689 39.429 119.78 144.76 93 83 93 37 121 139 1 2 1 1 2 2 21013 19869 2145 19135 45865;45866 53091;53092 53092 2 TSPEPQR Unmodified 813.39808 0.39808091 1970 Q3UF95;Q9Z1R2;G3UYQ2;A0A1B0GX81;G3UZT6;S4R224 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 3 0 1 23.241 23.241 2 0.059738 4310 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.141 15.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19870 1970 19136 45867 53093 53093 1 TSPFPILLSFENHVDSPK Unmodified 2027.0364 0.036392091 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 8.5 0.5 1 1 82.197 82.197 3 0.00012563 29075 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.731 35.03 30.044 0 0 40.441 28 29.848 28 0 0 37 28 28 1 0 0 1 1 1 7694.3 19871 3373 19137 45868;45869 53094;53095 53094 2 TSPIEGLSGNPADLEK Unmodified 1626.8101 0.81008055 928 F7AAP4;E9Q828;Q6Q477 Atp2b4 Calcium-transporting ATPase yes no 0 0 0 0 9 4 1 1 65.742 65.742 3 1.3122E-07 23453 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.46 66.906 78.98 209.13 155.32 278.9 311.28 218.18 74 204 167 269 317 213 1 2 2 2 2 2 15263 19872 928 19138 45870;45871 53096;53097 53096 2 TSPNEGLSGNPADLER Unmodified 1655.7751 0.77509203 1096 G5E829;A0A1W2P7C7;A0A1W2P7R3 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 5.5 4.39 1 1 1 1 49.723 49.723 3 5.889E-42 16001 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 168.05 127.57 87.951 27.124 0 0 104.5 38.375 84 28 0 0 102 37 3 1 0 0 3 1 90970 19873 1096 19139 45872;45873;45874;45875 53098;53099;53100;53101;53102 53098 5 TSPQELSEEVSR Unmodified 1360.647 0.64703797 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 3 0 1 48.849 48.849 2 0.0017831 16098 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.515 35.287 0 0 40.034 0 38.702 0 0 0 37 0 37 0 0 0 1 0 1 0 3132.2 19874 844 19140 45876 53103 53103 1 TSPTEGLADNTNDLEK Unmodified 1703.785 0.78498801 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 6.25 3.96 1 1 1 1 54.808 54.808 3;4 6.1589E-08 19032 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.03 90.574 226.67 218.93 183.02 136.02 181.33 253.1 213 223 185 130 185 241 4 5 4 3 4 4 24751 19875 487 19141 45877;45878;45879;45880 53104;53105;53106;53107;53108 53104 5 TSPTFFPK Unmodified 923.47527 0.4752686 1821 P70699;A2AFL3 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 9 0 1 59.765 59.765 2 0.0125 17778 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.36 70.161 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19876 1821 19142 45881 53109 53109 1 TSPTGPK Unmodified 686.3599 0.35990449 2243 Q6PER3;D3Z6G3 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 6.5 0.5 1 1 32.617 32.617 2 0.022445 6514 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.21 34.825 59.281 142.54 81.483 94.201 137.8 252.97 56 139 83 93 139 241 1 2 1 1 1 2 20641 19877 2243 19143 45882;45883 53110;53111 53111 2 TSPVEGLPGTAPDLEK Unmodified 1609.8199 0.81991695 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 5.5 0.5 1 1 64.691 64.691 2;3 3.7597E-05 22168 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.38 61.553 89.614 52.836 51.221 88.203 0 0 84 56 55 83 0 0 1 1 2 1 0 0 8971.3 19878 1042 19144 45884;45885 53112;53113 53113 2 TSPVEGLPGTAPDLEKR Unmodified 1765.921 0.92102798 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 1 5.5 0.5 1 1 56.967 56.967 3 0.0023789 19379 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 49.606 17.218 0 86.514 107.54 68.307 37.242 39.442 0 83 107 69 37 37 0 2 2 2 1 1 6884.8 19879 1042 19145 45886;45887 53114;53115 53114 2 TSQEPLIVTWQK Unmodified 1428.7613 0.76127986 1222 Q80VX2;O54901;E9QMY1;E9PZI9;Q05D16 Cd200 OX-2 membrane glycoprotein yes no 0 0 0 0 7 0 2 68.444 68.444 2;3 0.00093035 23224 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.548 53.075 29.849 57.277 17.617 140.17 46.413 97.814 28 56 19 130 47 93 1 2 1 2 1 2 11408 19880 1222 19146 45888;45889 53116;53117 53116 2 TSQGLQTEQR Unmodified 1146.5629 0.56291441 1297 P01027 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 0 4 0 1 29.399 29.399 2 0.027955 6676 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.598 9.3154 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 771.83 19881 1297 19147 45890 53118 53118 1 TSQGNAVNPVWEEEPIVFK Unmodified 2143.0586 0.058584096 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 5.33 0.471 2 1 77.887 77.887 3;4 4.0703E-05 29102 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.055 39.933 69.359 45.857 26.052 49.818 0 39.442 65 46 28 47 0 37 2 1 1 2 0 1 5656.1 19882 3373 19148 45891;45892;45893 53119;53120;53121 53120 3 TSQLTSLAMLMLDSYYR Unmodified 1991.9696 0.96963443 1135 I7HJQ9;Q9Z2C4 Mtmr1 Myotubularin-related protein 1 yes no 0 0 0 0 12 0 1 100.34 100.34 3 0.0001461 28482 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.528 48.382 0 0 2.9691 6.2154 8.8076 9.3427 0 0 3 6 9 9 0 0 1 1 1 1 1654.4 19883 1135 19149 45894 53122 53122 1 TSQSEETR Unmodified 936.41485 0.41485319 1475;2818 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1;Q923T9;A0A2I3BQP6;A0A286YCH4 Camk2b;Camk2g Calcium/calmodulin-dependent protein kinase type II subunit beta;Calcium/calmodulin-dependent protein kinase type II subunit gamma no no 0 0 0 0 13 0 1 18.015 18.015 2 0.0012532 2819 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 139.74 77.74 0 6.3046 4.7522 6.2748 0 0 0 6 5 6 0 0 0 1 1 1 0 0 1069.4 19884 1475;2818 19150 45895 53123 53123 1 TSQTVATFLDELAQK Unmodified 1650.8465 0.84646606 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 8 0 1 89.773 89.773 3 6.0395E-05 32531 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.738 56.183 78.361 61.828 122.51 92.42 102.45 0 74 65 120 93 102 0 1 1 1 2 2 0 4129.7 19885 145 19151 45896 53124;53125 53125 2 TSQVTSSDLESTLEK Unmodified 1623.7839 0.78392538 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 5 0 1 60.395 60.395 3 0.0040623 20917 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.873 27.132 39.21 56.359 34.746 38.37 0 0 37 56 37 37 0 0 1 1 1 1 0 0 3215.2 19886 2235 19152 45897 53126 53126 1 TSQVYLIVQVPPK Unmodified 1470.8446 0.84461556 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 9.83 0.687 2 3 1 71.793 71.793 2;3 1.3834E-08 21720 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.058 66.46 108.89 110.76 80.068 108.36 166.13 192.47 102 111 74 102 167 185 1 1 1 1 1 2 18427 19887 13 19153 45898;45899;45900;45901;45902;45903 53127;53128;53129;53130;53131;53132 53131 6 TSRPENAIIYSNNEDFQVGQAK Unmodified 2480.1932 0.1931801 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 5.33 0.471 2 1 56.298 56.298 3;4 1.8445E-21 18357 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 116.98 79.305 0 9.0786 100.08 0 85.509 38.106 0 9 93 0 83 37 0 1 2 0 2 1 18510 19888 1537 19154 45904;45905;45906 53133;53134;53135 53135 3 TSSAEMPTIPLGSAVEAIR Unmodified 1928.9877 0.98772734 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8.67 3.09 1 1 1 75.029 75.029 3 0.00034543 28458 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.226 25.939 48.717 0 107.68 54.79 0 69.29 46 0 102 56 0 65 1 0 1 1 0 1 11733 19889 2517 19155 45907;45908;45909 53136;53137;53138 53138 3 TSSIADEGTYTLDSILR Unmodified 1840.9054 0.9054375 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 3.56 1 1 1 79.884 79.884 3 4.3538E-39 30112 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 157.58 115.48 59.576 67.792 70.132 39.925 27.454 69.29 56 65 65 37 28 65 2 2 1 1 1 1 20911 19890 728 19156 45910;45911;45912 53139;53140;53141 53139 3 TSSLAEAENMADLIDGYCR Unmodified 2114.9249 0.92486909 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 4 0 1 81.944 81.944 3 0.0016519 30920 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.138 39.478 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19891 3261 19157 45913 53142 53142 1 TSSPEESIR Unmodified 1004.4775 0.47745344 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 2.5 0.5 1 1 33.511 33.511 2 0.0010035 8747 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.69 44.207 88.344 118.75 236.62 153.36 220.26 173.35 83 120 232 157 223 167 1 2 3 3 3 2 15719 19892 287 19158 45914;45915 53143;53144;53145 53143 3 TSSSGFADFTSFGNEEQQLAWAK Unmodified 2507.1241 0.12409748 2095 Q60902 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes yes 0 0 0 0 6 0 1 83.615 83.615 3 1.2829E-07 31135 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.529 41.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19893 2095 19159 45916 53146 53146 1 TSSVTLQTITAQNAAVQAVK Unmodified 2030.1008 0.10078326 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 5 4.06 2 1 1 67.665 67.665 3;4 1.6772E-22 22178 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.868 71.839 0 58.52 0 50.278 19 78.884 0 55 0 46 19 74 0 1 0 1 1 1 7679.3 19894 2517 19160 45917;45918;45919;45920 53147;53148;53149;53150 53149 4 TSTESEVLK Unmodified 992.50261 0.50260556 2804 Q922D8 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes yes 0 0 0 0 5 0 1 45.12 45.12 2 0.0063045 13613 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.688 36.553 49.128 45.631 0 0 0 49.036 46 46 0 0 0 46 1 1 0 0 0 1 2792.5 19895 2804 19161 45921 53151 53151 1 TSTPEEAGVR Unmodified 1045.504 0.50400254 2331 Q8CAA2;Q80X80 C2cd2l C2 domain-containing protein 2-like yes no 0 0 0 0 2.5 0.5 1 1 31.895 31.895 2 5.5243E-05 8333 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 111.06 73.338 30.044 0 47.69 76.665 73.076 23.476 28 0 46 74 74 23 1 0 1 2 2 1 8815.5 19896 2331 19162 45922;45923 53152;53153 53153 2 TSTQEYAAK Unmodified 997.47164 0.47163978 2818 Q923T9;A0A2I3BQP6 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 5.5 0.5 1 1 37.536 37.536 2 0.0021401 9932 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.342 63.501 110.16 71.308 0 90.97 44.743 88.267 103 74 0 84 46 84 2 2 0 2 1 2 6775.8 19897 2818 19163 45924;45925 53154;53155 53154 2 TSTSAVPNLFVPLNTNPK Unmodified 1899.0102 0.010177341 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6RDR0;A0A0J9YVI4 Add1 Alpha-adducin yes no 0 0 0 0 10.3 1.67 1 2 1 1 1 1 75.73 75.73 3;4 4.1591E-27 23002 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 142.4 113.04 276.52 276.7 317.88 235.68 258.71 182.41 260 278 316 232 259 176 4 5 5 5 5 3 154800 19898 3276 19164 45926;45927;45928;45929;45930;45931;45932 53156;53157;53158;53159;53160;53161;53162;53163 53159 8 TSTSQAIFR Unmodified 1009.5193 0.51925868 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 13 0 1 43.018 43.018 2 0.0047696 12932 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.716 38.649 69.27 94.281 0 0 0 99.138 65 93 0 0 0 93 1 1 0 0 0 1 5051.4 19899 2803 19165 45933 53164 53164 1 TSTVDLPIESQLLWQLDR Unmodified 2113.1055 0.10553429 1957 Q3U2G2 Hspa4 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 90.285 90.285 2;3 1.8191E-35 33437 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 148.97 118.38 9.612 8.9279 0 18.837 0 20.254 9 9 0 18 0 19 1 1 0 2 0 1 15085 19900 1957 19166 45934;45935;45936;45937 53165;53166;53167;53168 53166 4 TSTWSGESK Unmodified 981.44034 0.44033966 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 6 0 1 42.294 42.294 2 0.002743 11729 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.19 59.946 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19901 1333 19167 45938 53169 53169 1 TSVAQTHLEDAGAAIAAAEAAVQQLR Unmodified 2591.3303 0.33034228 3285 Q9QYX7;S4R2E0 Pclo Protein piccolo yes no 0 0 0 0 6 0 1 85.887 85.887 4 0.005288 32156 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.548 18.294 30.044 0 0 0 58.576 0 28 0 0 0 56 0 1 0 0 0 1 0 1725.8 19902 3285 19168 45939 53170 53170 1 TSVDAAADYVEGVR Unmodified 1451.6892 0.68923713 881 E9Q1V3;O35435 Dhodh Dihydroorotate dehydrogenase (quinone), mitochondrial yes no 0 0 0 0 4 0 1 59.918 59.918 3 0.030893 21022 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 37.555 22.865 29.904 27.776 0 30.604 0 29.848 28 28 0 28 0 28 1 1 0 1 0 1 2017.8 19903 881 19169 45940 53171 53171 1 TSVETALR Unmodified 875.47125 0.47124585 1564 P47754;D6RCW7;A0A0N4SVM0 Capza2 F-actin-capping protein subunit alpha-2 yes no 0 0 0 0 8.67 3.09 1 1 1 41.552 41.552 2 0.0036446 11494 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.13 57.325 381.49 339.97 336.27 439.28 567.2 592.5 359 340 344 430 581 571 3 2 2 3 3 3 78653 19904 1564 19170 45941;45942;45943 53172;53173;53174 53172 3 TSVGPVIQK Unmodified 927.53893 0.53893149 235 Q3TYT1;A0A140LIF0;P97478 Coq7 5-demethoxyubiquinone hydroxylase, mitochondrial yes no 0 0 0 0 8 0 1 50.18 50.18 2 0.00094231 13967 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.12 68.463 0 48.649 17.639 0 0 49.036 0 46 19 0 0 46 0 1 1 0 0 1 3526.5 19905 235 19171 45944 53175 53175 1 TSVLEMIAQAR Unmodified 1217.6438 0.64380726 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 9.5 0.5 1 1 74.501 74.501 2 0.0032751 24804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.434 48.279 69.187 26.5 71.271 32.513 26.283 113.31 65 28 69 32 28 107 2 1 2 1 1 2 18632 19906 1653 19172 45945;45946 53176;53177 53176 2 TSVNVVGDSFGAGIVYHLSK Unmodified 2049.0531 0.053104788 1544;502 A2APL5;F6ZRK3;F7CAM6;P43006 Slc1a2 Amino acid transporter;Excitatory amino acid transporter 2 no no 0 0 0 0 8.89 3.14 1 2 2 1 1 2 73.412 73.412 3;4 2.7405E-50 24924 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 160.81 122.53 595.92 281.33 763.14 610.45 499.42 1094.4 559 289 728 593 511 1040 6 4 7 9 6 11 194460 19907 502;1544 19173 45947;45948;45949;45950;45951;45952;45953;45954;45955 53178;53179;53180;53181;53182;53183;53184;53185;53186;53187;53188 53179 11 TSVQFQNFLPTVVHPGDLQTQLAVQTK Unmodified 2995.5767 0.57672056 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 9.5 0.5 1 1 82.057 82.057 4 5.8857E-12 25927 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.282 59.005 69.255 27.776 58.748 36.94 0 88.478 65 28 56 37 0 83 2 1 1 1 0 2 26100 19908 1400 19174 45956;45957 53189;53190 53190 2 TSVQTEDDQLIAGQSAR Unmodified 1817.8755 0.87553435 799;1454 E0CXB9;Q61301;P26231 Ctnna2;Ctnna1 Catenin alpha-2;Catenin alpha-1 no no 0 0 0 0 3 1 1 1 49.451 49.451 3 2.9106E-06 15951 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.744 58.57 29.839 17.881 79.927 0 104.73 57.014 28 19 75 0 102 55 1 1 3 0 3 2 9163.3 19909 799;1454 19175 45958;45959 53191;53192;53193 53192 3 TSVSGNWK Unmodified 877.42938 0.42938104 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 9.12 1.96 2 2 1 1 1 1 46.933 46.933 2;3 0.00011176 12540 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 159.46 98.657 1272.5 1281.2 1357.4 1452.1 1601 1254.3 1196 1294 1367 1428 1628 1206 6 5 3 6 5 4 340580 19910 1282 19176 45960;45961;45962;45963;45964;45965;45966;45967 53194;53195;53196;53197;53198;53199;53200;53201;53202 53197 9 TSVSLAVSR Unmodified 918.51345 0.51344502 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.5 1.5 1 1 44.837 44.837 2 0.0034793 12208 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.37 40.952 107.71 147.43 166.47 179.74 143.7 123.82 102 148 167 176 148 120 2 2 1 2 1 1 21140 19911 1401 19177 45968;45969 53203;53204 53203 2 TSVSSCTK Unmodified 868.39603 0.396032 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 6.5 0.5 1 1 33.149 33.149 2 0.0028793 6710 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.84 79.045 20.387 0 0 20.767 0 0 19 0 0 19 0 0 1 0 0 1 0 0 1285.7 19912 628 19178 45970;45971 53205;53206 53206 2 TSVSSVSASPSR Unmodified 1163.5782 0.57823012 1415 P19246 Nefh Neurofilament heavy polypeptide yes yes 0 0 0 0 8 3.56 1 1 1 34.476 34.476 2 6.7813E-49 8628 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 201.56 141.5 108.21 91.727 129.41 92.375 83.008 38.424 102 92 129 93 83 37 3 2 3 3 2 1 21219 19913 1415 19179 45972;45973;45974 53207;53208;53209 53209 3 TSVVDLLYWR Unmodified 1250.6659 0.66592292 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 84.045 84.045 2 0.0013443 26643 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.265 66.128 49.015 74.835 145.03 130.3 136.27 202.92 46 74 139 124 135 194 1 2 3 3 2 4 33691 19914 2886 19180 45975;45976;45977;45978 53210;53211;53212;53213 53211 4 TSYAQHQQVR Unmodified 1216.5949 0.59488324 1844 P97351 Rps3a 40S ribosomal protein S3a yes yes 0 0 0 0 5.5 0.5 1 1 24.648 24.648 3 9.4201E-06 4155 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 114.86 88.965 20.319 13.526 0 53.139 0 20.254 19 14 0 51 0 19 1 1 0 2 0 1 4877.7 19915 1844 19181 45979;45980 53214;53215 53214 2 TSYEEFTHK Unmodified 1140.5088 0.50875357 2891 Q99PV0 Prpf8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 0 5 0 1 46.205 46.205 3 0.013304 14177 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.278 22.024 59.734 15.412 46.41 47.949 34.849 48.042 56 19 46 47 37 46 1 1 1 1 1 1 1668.9 19916 2891 19182 45981 53216 53216 1 TSYFLCYDPPTIK Unmodified 1603.7592 0.75923095 2513 Q8CAA7 Pgm2l1 Glucose 1,6-bisphosphate synthase yes yes 0 0 0 0 9 0.816 1 1 1 74.652 74.652 2;3 0.0016047 24780 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.893 50.625 103.15 92.399 77.743 34.593 132.59 52.523 97 93 75 37 130 51 3 2 2 2 3 2 16571 19917 2513 19183 45982;45983;45984 53217;53218;53219 53218 3 TSYQSLTELNDSPVPLELER Unmodified 2290.1329 0.13287125 2041 Q5DQR4 Stxbp5l Syntaxin-binding protein 5-like yes yes 0 0 0 0 4 0 1 76.853 76.853 3 0.00068013 28557 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.784 36.53 0 0 9.738 0 29.288 0 0 0 9 0 28 0 0 0 1 0 1 0 2017.8 19918 2041 19184 45985 53220 53220 1 TSYTLTDLEPGAEYIISITAER Unmodified 2442.2166 0.21660088 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8 2.92 2 1 1 92.632 92.632 3;4 2.651E-12 37025 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.847 60.768 49.983 76.502 43.788 45.524 4.6214 60.63 47 75 42 42 5 57 4 3 2 4 1 3 29488 19919 2479 19185 45986;45987;45988;45989 53221;53222;53223;53224;53225;53226 53226 6 TSYYENVIK Unmodified 1115.5499 0.5498901 432 Q91WQ3;A2A7S7;F6VXZ2 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 7 0 1 56.498 56.498 3 0.0033719 17563 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.563 41.904 0 0 46.767 67.455 42.68 68.072 0 0 46 65 46 65 0 0 1 1 1 1 3306.5 19920 432 19186 45990 53227 53227 1 TTAAFQQGK Unmodified 950.48214 0.48214489 2147 Q62241 Snrpc U1 small nuclear ribonucleoprotein C yes yes 0 0 0 0 7.5 0.5 1 1 42.137 42.137 2 4.0595E-07 10136 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.98 81.799 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19921 2147 19187 45991;45992 53228;53229 53229 2 TTAASGDLAQAPGAFK Unmodified 1504.7522 0.75217174 1424 P20357;G3UZV6 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 6.33 1.25 1 1 1 57.064 57.064 3 5.0043E-05 18687 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.796 58.737 325.69 279.94 207.27 355.79 359.29 134.13 306 287 204 343 361 130 4 4 2 4 3 1 33308 19922 1424 19188 45993;45994;45995 53230;53231;53232;53233 53232 4 TTADGVAR Unmodified 789.39808 0.39808091 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 3 0 1 26.585 26.585 2 0.0070934 5825 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.36 41.58 48.981 25.795 41.52 47.803 0 59.696 46 28 42 46 0 56 1 1 1 1 0 1 4207.5 19923 565 19189 45996 53234 53234 1 TTAEGVAR Unmodified 803.41373 0.41373097 1104 G5E8H1 Gria2 no no 0 0 0 0 4 0 1 27.048 27.048 2 0.0012634 5494 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.79 65.81 78.533 72.018 85.089 0 67.99 0 74 74 83 0 65 0 1 1 1 0 1 0 23810 19924 1104 19190 45997 53235 53235 1 TTAFGFLNALCK Unmodified 1341.6751 0.67510739 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 8 4.97 1 1 1 82.971 82.971 3 3.0444E-05 29154 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.614 67.893 35.14 57.819 74.314 135.75 106.75 0 33 56 74 134 106 0 2 2 2 4 3 0 22589 19925 3216 19191 45998;45999;46000 53236;53237;53238;53239 53236 4 TTAKEPSASGK Unmodified 1075.551 0.55095274 2322 Q80VM5;D6RFR3 Dpp6 yes no 0 0 0 1 7 0 1 33.474 33.474 3 0.01142 6894 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.164 33.559 48.722 25.076 85.556 56.109 0 69.29 46 28 83 56 0 65 1 1 1 1 0 1 2522.6 19926 2322 19192 46001 53240 53240 1 TTALTPWK Unmodified 916.50182 0.5018177 987 F6Z2M6;F6RQ26 Ntm yes no 0 0 0 0 10 0 1 60.869 60.869 2 0.011961 16427 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.318 52.526 99.143 61.532 56.4 0 46.807 38.106 93 65 56 0 46 37 1 1 1 0 1 1 4573.9 19927 987 19193 46002 53241 53241 1 TTDFSDFLSIVGCTK Unmodified 1689.792 0.79198764 3045 Q9D1P4;A0A1L1STQ1;A0A1L1SSG7;A0A1L1STZ1;A0A1L1SU22 Chordc1 Cysteine and histidine-rich domain-containing protein 1 yes no 0 0 0 0 8.5 0.5 1 1 90.609 90.609 3 0.00077174 32825 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.885 39.046 39.292 18.848 0 0 0 20.254 38 19 0 0 0 19 2 1 0 0 0 1 8695.8 19928 3045 19194 46003;46004 53242;53243 53242 2 TTDGIMLDFK Unmodified 1139.5533 0.55326092 3438 yes yes 0 0 0 0 7 3.54 1 1 1 1 61.056 61.056 3 0.0080937 21350 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.066 10.554 107.81 371.68 308.51 264.72 369.72 454.23 102 361 316 260 380 436 2 4 3 2 4 4 42189 + 19929 3438 19195 46005;46006;46007;46008 53244;53245;53246;53247 53245 4 TTDGVYEGVAIGGDR Unmodified 1508.7107 0.71070086 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 4 0 1 53.952 53.952 3 0.00050339 18137 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.861 40.283 0 0 48.977 17.848 0 0 0 0 46 19 0 0 0 0 1 1 0 0 5691.3 19930 2020 19196 46009 53248 53248 1 TTDIFQTVDLWEGK Unmodified 1651.8094 0.80935227 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 7.75 2.11 2 3 2 1 87.832 87.832 2;3;4 3.7279E-11 32963 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.64 85.618 183.48 165.78 172.58 158.34 65.423 310.47 172 163 168 153 66 293 5 6 5 6 3 8 101960 19931 3315 19197 46010;46011;46012;46013;46014;46015;46016;46017 53249;53250;53251;53252;53253;53254;53255;53256;53257;53258;53259 53250 11 TTDLLTDWEK Unmodified 1220.5925 0.5924832 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 3.56 1 1 1 73.589 73.589 2;3 0.0033889 27010 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.434 15.297 108.41 59.791 123.14 81.87 138.4 94.123 102 65 121 84 139 92 2 2 2 2 2 2 9028.8 19932 3204 19198 46018;46019;46020 53260;53261;53262 53260 3 TTDVEGR Unmodified 776.36645 0.36644643 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 2.5 0.5 1 1 26.463 26.463 2 0.007051 5569 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130 47.696 59.76 65.13 0 0 0 88.478 56 65 0 0 0 83 1 1 0 0 0 1 15047 19933 3387 19199 46021;46022 53263;53264 53263 2 TTDVMFGGK Unmodified 954.44807 0.44806757 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 7.5 0.5 1 1 57.131 57.131 2;3 0.00363 17245 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.698 50.393 129.56 54.9 0 69.864 62.792 57.904 121 56 0 65 65 56 2 1 0 1 1 1 9598.9 19934 2298 19200 46023;46024 53265;53266 53266 2 TTEAAATAVGTAATTAAVVAAAGIAASGPVK Unmodified 2669.4236 0.42357396 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 10.4 1.26 3 2 1 3 95.79 95.79 3;4;5 3.8497E-32 31227 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.74 78.271 195.59 174.16 195.71 343.29 136.36 98.607 183 169 190 326 134 93 8 7 5 9 4 4 136860 19935 1382 19201 46025;46026;46027;46028;46029;46030;46031;46032;46033 53267;53268;53269;53270;53271;53272;53273;53274;53275;53276;53277;53278;53279;53280;53281;53282 53277 16 TTEAAATAVGTAATTAAVVAAAGIAASGPVKELEAER Unmodified 3396.7736 0.77364205 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 8.5 0.5 1 1 96.891 96.891 4 1.1239E-07 34756 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.178 39.888 0 0 0 20.767 9 9.594 0 0 0 19 9 9 0 0 0 1 1 1 2680.4 19936 1382 19202 46034;46035 53283;53284 53284 2 TTELQDELSHLR Unmodified 1440.7209 0.72087161 700 D6RCX5;D3Z0X8;D3YW54;Q9CWE0 Mtfr1l Mitochondrial fission regulator 1-like yes no 0 0 0 0 3.5 0.5 1 1 59.612 59.612 3 0.0021716 21179 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.122 38.686 30.044 0 0 60.86 18.484 0 28 0 0 56 19 0 2 0 0 2 1 0 10078 19937 700 19203 46036;46037 53285;53286 53285 2 TTEPVSELLK Unmodified 1115.6074 0.60740498 1049 F8WIR1;P18242 Ctsd Cathepsin D yes no 0 0 0 0 7.67 3.77 2 1 63.312 63.312 2;3 0.0002937 22486 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.277 44.488 63.131 18.402 141.52 114.1 167.89 166.84 59 19 135 115 171 161 2 1 2 3 3 3 20676 19938 1049 19204 46038;46039;46040 53287;53288;53289 53289 3 TTEQDLK Unmodified 833.41306 0.41306227 2793 Q921F2;Q6VYI4;Q6VYI5;Q8BLD4;Q8R0B4;A0A087WRZ5;A0A087WQA5;A0A087WR97;A0A087WSE4 Tardbp TAR DNA-binding protein 43 yes no 0 0 0 0 4 0 1 38.916 38.916 2 0.034101 11211 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.005 7.6257 0 116.45 98.673 105.61 0 88.478 0 111 102 102 0 83 0 1 1 1 0 1 16152 19939 2793 19205 46041 53290 53290 1 TTEQLIEAVNNGDFEAYAK 2 Deamidation (N) 2113.9692 0.96915997 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 2 0 0 3 0 1 75.875 75.875 3 0.00095168 28589 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 62.617 45.737 9.3875 19.096 29.103 0 39.748 0 9 19 28 0 38 0 1 1 1 0 1 0 1131 19940 1475 19206 46042 53291 53291 545;546 1 TTEQLIEAVNNGDFEAYAK Deamidation (N) 2112.9851 0.98514438 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 1 0 0 6.1 3.48 5 3 2 78.772 78.772 3;4 1.3142E-13 29241 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.31 95.518 256.38 274.99 412.68 128.7 174.29 335.09 241 277 400 130 178 317 4 6 8 5 7 6 112150 19941 1475 19206 46043;46044;46045;46046;46047;46048;46049;46050;46051;46052 53292;53293;53294;53295;53296;53297;53298;53299;53300;53301;53302;53303 53302 545;546 12 TTEQLIEAVNNGDFEAYAK Unmodified 2112.0011 0.0011287971 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 5.6 1.02 1 1 2 1 79.616 79.616 3;4 2.7011E-08 29942 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.1 79.304 9.4525 106.47 115.06 59.019 84.212 205.47 9 102 112 56 84 195 1 4 4 2 3 6 51962 19942 1475 19206 46053;46054;46055;46056;46057 53304;53305;53306;53307;53308;53309 53307 6 TTESGFTPLHIAAHYGNVNVATLLLNR Unmodified 2908.5195 0.51954003 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2D6;S4R1I1;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 10.5 0.5 1 1 77.779 77.779 4 2.0569E-23 23422 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.175 83.463 158.58 44.018 0 110.62 138.07 176.46 148 47 0 102 138 168 4 2 0 2 3 3 20018 19943 3449;3451;3452 19207 46058;46059 53310;53311;53312;53313 53313 4 TTETHVER Unmodified 971.46722 0.46722311 2234 Q6PB44 Ptpn23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 0 0 0 2 0 1 20.498 20.498 3 0.0026092 3301 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.476 35.622 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 3072.7 19944 2234 19208 46060 53314 53314 1 TTEVGSASEVK Acetyl (Protein N-term) 1148.5561 0.55609769 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4;A0A1W2P896;A0A1W2P7H7 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 1 0 0 0 1.5 0.5 1 1 48.447 48.447 2 5.0208E-14 15403 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 93.111 70.281 78.547 101.55 100.56 74.439 82.004 96.798 74 102 102 75 83 93 1 2 2 2 1 2 34196 19945 1250 19209 46061;46062 53315;53316 53316 2 TTEVGSASEVKK Acetyl (Protein N-term) 1276.6511 0.65106071 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;A0A1W2P7I4;A0A1W2P896;A0A1W2P7H7 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 1 0 0 1 4 0 1 45.965 45.965 2 2.1523E-05 14383 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.927 21.357 0 0 20.558 0 9.414 0 0 0 19 0 9 0 0 0 1 0 1 0 1412.5 19946 1250 19210 46063 53317 53317 1 TTGAQEDR Unmodified 876.39372 0.39372381 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 1 0 1 18.701 18.701 2 0.040713 2837 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.414 25.522 12.722 13.8 14.256 0 24.058 0 12 14 14 0 23 0 1 1 1 0 1 0 6460.2 19947 2646 19211 46064 53318 53318 1 TTGASFEK Unmodified 839.4025 0.40249759 2575 Q8K021;Q3TSA8 Scamp1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 43.058 43.058 2 0.0068751 12182 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.93 63.899 247.7 211.15 247.55 271.14 431.62 135.53 232 213 250 269 429 130 2 2 2 3 3 1 28257 19948 2575 19212 46065;46066;46067;46068 53319;53320;53321;53322 53319 4 TTGEENDPATWK Unmodified 1347.5943 0.59427411 815 E9PUD2 Dnm1l yes yes 0 0 0 0 4 0 1 51.154 51.154 2 0.00040211 16865 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.014 35.407 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 1870.3 19949 815 19213 46069 53323 53323 1 TTGFGMIYDSLDYAK Unmodified 1680.7705 0.77052392 370 A0A286YEB7;P62849 Rps24 40S ribosomal protein S24 yes no 0 0 0 0 8 0 1 81.462 81.462 3 0.0051895 28693 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.691 34.903 0 39.368 0 39.57 46.298 0 0 37 0 37 46 0 0 1 0 1 1 0 4497.8 19950 370 19214 46070 53324 53324 1 TTGIVETHFTFK Unmodified 1379.7085 0.70851601 1411;1330;622;3136 B2RSH2;P08752;A0A0A6YWA9;P18872;D3Z2M7;Q9DC51 Gnai1;Gnai2;Gnao1;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(o) subunit alpha;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 8 0.816 1 1 1 60.012 60.012 3 3.2993E-08 18621 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.97 78.667 337.7 487.68 334.14 597.9 392.52 581.5 317 485 338 572 405 552 2 3 2 3 2 2 87363 19951 622;1330;1411;3136 19215 46071;46072;46073 53325;53326;53327 53326 3 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Oxidation (M) 3198.6019 0.60194904 1673;1781;2366 P60710;E9Q1F2;E9Q5F4;G3UZ07;P63260;Q8BFZ3 Actb;Actg1;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 0 0 1 0 6.4 1.02 1 2 1 1 71.022 71.022 4 1.8211E-12 25375 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.733 54.333 118.52 92.084 53.977 128.19 64.809 167.15 111 93 56 121 66 158 3 3 2 4 3 4 58797 19952 1673;1781;2366 19216 46074;46075;46076;46077;46078 53328;53329;53330;53331;53332 53331 123 5 TTGIVMDSGDGVTHTVPIYEGYALPHAILR Unmodified 3182.607 0.60703441 1673;1781;2366 P60710;E9Q1F2;E9Q5F4;G3UZ07;P63260;Q8BFZ3 Actb;Actg1;Actbl2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 no no 0 0 0 0 7.8 2.23 1 4 4 2 1 1 1 1 73.733 73.733 3;4;5 4.9058E-51 26492 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.22 128.49 915.42 600.1 856.35 722.44 718.89 810.06 861 619 842 704 721 773 13 12 10 10 9 10 1106400 19953 1673;1781;2366 19216 46079;46080;46081;46082;46083;46084;46085;46086;46087;46088;46089;46090;46091;46092;46093 53333;53334;53335;53336;53337;53338;53339;53340;53341;53342;53343;53344;53345;53346;53347;53348;53349;53350;53351 53334 19 TTGLVGLAVCDTPHER Unmodified 1724.8516 0.85156821 2892 Q9CPP6 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 0 0 0 0 6.5 0.5 1 1 55.402 55.402 3 1.1521E-33 17942 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.18 138.3 59.862 122.28 81.397 84.554 125.78 184.03 56 120 83 83 130 176 1 2 1 1 2 2 28513 19954 2892 19217 46094;46095 53352;53353 53352 2 TTGSPDDR Unmodified 847.36717 0.36717471 1015 F7AVU1;Q8K2Y9 Ccm2 Cerebral cavernous malformations protein 2 homolog yes no 0 0 0 0 1.5 0.5 1 1 21.034 21.034 2 0.004955 3191 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.49 46.111 30.044 19.729 29.112 15.976 42.152 0 28 19 28 15 41 0 1 1 1 1 2 0 5319.8 19955 1015 19218 46096;46097 53354;53355 53354 2 TTHGSALR Unmodified 841.44061 0.44061443 110 A0A0J9YTU3;Q5SXY1;A0A0J9YUF8;A0A0J9YUR2;A0A0J9YV86 Specc1 Cytospin-B yes no 0 0 0 0 6 0 1 19.407 19.407 3 0.013143 2717 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.597 32.072 0 7.2648 10.96 11.37 0 15.99 0 7 11 11 0 15 0 1 1 1 0 1 729.28 19956 110 19219 46098 53356 53356 1 TTHYGSLPQK Unmodified 1130.572 0.57202253 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 8.85 1.75 1 1 5 2 2 1 1 39.246 39.246 2;3;4 2.872E-09 9873 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 148.91 117.28 2731.6 2349.8 2556.6 1782.4 3474.5 3449.3 2571 2378 2565 1788 3510 3325 14 9 11 10 11 12 1936100 19957 991;1305 19220 46099;46100;46101;46102;46103;46104;46105;46106;46107;46108;46109;46110;46111 53357;53358;53359;53360;53361;53362;53363;53364;53365;53366;53367;53368;53369;53370 53358 14 TTIAQQVK Unmodified 887.50763 0.50763136 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 43.752 43.752 2 5.673E-07 10967 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 169.06 73.709 1182.9 1007.7 1054.6 972.35 806.27 934.5 1113 1036 1048 961 832 895 6 5 4 6 5 5 260470 19958 1554 19221 46112;46113;46114;46115;46116 53371;53372;53373;53374;53375;53376;53377 53374 7 TTIEAIHGLMSQVIK Unmodified 1639.8967 0.89672749 1212 O35864 Cops5 COP9 signalosome complex subunit 5 yes yes 0 0 0 0 11 0 2 77.97 77.97 3;4 4.7423E-05 23617 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.566 53.04 49.358 0 60.592 50.278 0 128.99 46 0 56 46 0 121 1 0 1 1 0 2 21706 19959 1212 19222 46117;46118 53378;53379 53379 2 TTIFSPEGR Unmodified 1006.5084 0.50835964 3310 Q9R1P0;E9PW69;E9Q0X0 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 7 0 1 51.202 51.202 2 0.0034186 15014 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.64 44.668 78.78 0 104.51 122.4 134.81 144.33 74 0 102 120 139 139 1 0 1 1 1 1 17276 19960 3310 19223 46119 53380 53380 1 TTIFTDAK Unmodified 895.4651 0.46509784 1749 P62869 Tceb2 Transcription elongation factor B polypeptide 2 yes yes 0 0 0 0 9.67 2.49 1 1 1 55.834 55.834 2 0.0012864 17459 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.68 82.782 246.17 198.53 262.69 282.87 225.08 318.71 231 204 259 277 232 305 2 2 2 3 2 3 31860 19961 1749 19224 46120;46121;46122 53381;53382;53383 53381 3 TTITTTTSSSTTVGSAR Unmodified 1670.8323 0.83227255 1205 O35682;A0A0N4SW94 Myadm Myeloid-associated differentiation marker yes no 0 0 0 0 7.4 3.93 1 1 1 1 1 40.51 40.51 3 2.8391E-07 11367 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 106.19 74.035 52.562 0 28.61 34.653 23.08 53.707 51 0 28 33 24 51 3 0 2 2 2 3 16204 19962 1205 19225 46123;46124;46125;46126;46127 53384;53385;53386;53387;53388 53384 5 TTKPQAQPER Unmodified 1154.6044 0.60438529 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 1 6 0 1 28.53 28.53 3 0.042193 5371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.292 29.422 0 29.792 0 0 47.467 18.9 0 28 0 0 46 19 0 1 0 0 1 1 1868 19963 1433 19226 46128 53389 53389 1 TTKPYPADIVVQFK Unmodified 1605.8766 0.87664397 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 10.7 1.89 1 1 1 1 2 67.498 67.498 3;4 1.022E-10 21512 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.33 79.536 364.66 735.66 603.36 373.83 468.49 771.5 342 724 598 361 472 734 3 6 4 4 4 5 130310 19964 1362 19227 46129;46130;46131;46132;46133;46134 53390;53391;53392;53393;53394;53395;53396 53391 7 TTLAHIIANNSK Deamidation (N) 1282.6881 0.68811492 2767 Q91XU0 Wrnip1 ATPase WRNIP1 yes yes 0 1 0 0 11 0 1 51.846 51.846 3 0.041254 12395 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.616 28.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19965 2767 19228 46135 53397 53397 991 1 TTLLHMLK Unmodified 955.55247 0.55247306 2837 Q99JZ4;A0A1W2P720;A0A1W2P869;A0A1W2P6N3 Sar1a no no 0 0 0 0 6.5 5.5 1 1 61.698 61.698 3 0.0087267 14584 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.88 35.083 187.27 103.58 177.21 136.16 276.64 229.82 176 112 176 139 278 223 2 2 2 2 2 2 16732 19966 2837 19229 46136;46137 53398;53399 53399 2 TTLLPGLLK Unmodified 954.61137 0.61136815 3329 Q9WUA2 Farsb Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 11.5 0.5 1 1 74.796 74.796 2 0.00046372 19754 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.31 86.523 103.05 182.17 359.17 351.5 271.75 307.01 97 180 357 338 278 297 1 2 4 3 3 3 41319 19967 3329 19230 46138;46139 53400;53401;53402;53403;53404 53404 5 TTLLYFYQQLR Unmodified 1444.7715 0.77145062 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 9.5 4.92 1 2 1 81.602 81.602 2;3 3.9214E-05 22418 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.11 61.396 39.701 20.216 19.246 69.898 28.62 49.285 37 19 19 65 28 47 1 1 1 2 1 2 31118 19968 3261 19231 46140;46141;46142;46143 53405;53406;53407;53408 53406 4 TTLQVDTLNTELAAER Unmodified 1773.9109 0.91085723 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 5 0 1 65.289 65.289 2 0.00030659 23126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.179 40.325 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19969 1974 19232 46144 53409 53409 1 TTLTAAITK Unmodified 918.5386 0.53859714 2361 Q8BFR5 Tufm Elongation factor Tu, mitochondrial yes yes 0 0 0 0 10 1.22 2 1 1 55.924 55.924 2;3 9.1427E-05 14189 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.13 81.347 732.25 639.64 281.86 623.36 957.45 404.54 687 652 281 600 956 393 4 4 2 3 4 3 72163 19970 2361 19233 46145;46146;46147;46148 53410;53411;53412;53413 53412 4 TTLTDLVPGTEYGVGISAVMNSK Deamidation (N) 2353.1723 0.17229323 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 1 0 0 7 0 1 86.883 86.883 3 0.0032587 31921 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.041 25.734 20.212 0 29.347 19.018 0 0 19 0 28 19 0 0 1 0 1 1 0 0 1164.9 19971 2479 19234 46149 53414 53414 936 1 TTLTDLVPGTEYGVGISAVMNSK Unmodified 2352.1883 0.18827764 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7 0 1 87.381 87.381 3 0.056623 32185 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 26.13 17.636 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 871.62 19972 2479 19234 46150 53415 53415 1 TTMAGLTMEELIQLVAAR Unmodified 1947.0169 0.016918978 2363 Q8BFU3 Rnf214 RING finger protein 214 yes yes 0 0 0 0 9 0 1 103.79 103.79 3 5.2713E-19 36679 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.3 109.4 8 0 0 0 0 0 8 0 0 0 0 0 1 0 0 0 0 0 953.41 19973 2363 19235 46151 53416 53416 1 TTMLLSK Unmodified 792.44153 0.44152563 3367 Q9Z0Y1 Dctn3 Dynactin subunit 3 yes yes 0 0 0 0 10 0 1 57.087 57.087 2 0.031524 14750 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 85.064 17.083 127.72 88.665 100.21 93.996 89.313 106.18 120 93 102 93 93 102 1 1 1 1 1 1 11697 19974 3367 19236 46152 53417 53417 1 TTNDLEDSYGQEWTYEQR Unmodified 2233.94 0.9399851 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 3 0.816 1 1 1 62.154 62.154 3 1.0487E-19 21769 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 132.9 121.47 20.346 8.2041 20.558 41.019 46.601 19.706 19 9 19 38 47 19 1 1 1 1 2 1 64151 19975 2253 19237 46153;46154;46155 53418;53419;53420;53421;53422 53418 5 TTNDLEDSYGQEWTYEQR Deamidation (N) 2234.924 0.92400069 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 1 0 0 6 4.97 1 1 1 63.5 63.5 3 1.1694E-06 23198 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 93.269 82.02 55.796 0 0 46.999 0 6.396 52 0 0 43 0 6 3 0 0 3 0 1 19876 19976 2253 19237 46156;46157;46158 53423;53424;53425 53424 894 3 TTNSSWVVVFK Unmodified 1266.6608 0.66083754 2280 Q7M6Y3;A0A140LHG9 Picalm Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 0 10 0 1 72.969 72.969 2 0.0094504 21967 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.57 24.849 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19977 2280 19238 46159 53426 53426 1 TTPASGER Unmodified 817.393 0.39299553 1009 F6ZDS4;Q7M739;F6RX08 Tpr Nucleoprotein TPR yes no 0 0 0 0 3.5 0.5 1 1 21.42 21.42 2 0.030758 3530 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.877 27.346 9.4198 54.375 19.036 30.604 4.7221 64.891 9 52 19 28 5 61 1 2 1 1 1 2 2939.2 19978 1009 19239 46160;46161 53427;53428 53427 2 TTPDVIFVFGFR Unmodified 1397.7343 0.73433683 370 A0A286YEB7;P62849 Rps24 40S ribosomal protein S24 yes no 0 0 0 0 9.33 0.471 2 1 88.905 88.905 2;3 0.0037044 28704 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.303 37.921 9.657 9.2416 20.004 9 0 50.102 9 9 19 9 0 47 1 1 1 1 0 2 8092.6 19979 370 19240 46162;46163;46164 53429;53430;53431;53432 53432 4 TTPEADDWSNPSSEPR Unmodified 1787.7598 0.75983589 2806 Q922H2 Pdk3 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial yes yes 0 0 0 0 2.5 0.5 1 1 48.253 48.253 3 0.00048422 15814 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.159 49.664 99.498 34.677 19.534 60.044 0 49.036 93 37 19 56 0 46 2 1 1 2 0 1 11778 19980 2806 19241 46165;46166 53433;53434 53434 2 TTPGPGTAQAGDAAR Unmodified 1369.6586 0.65860571 2638 Q8R191 Syngr3 Synaptogyrin-3 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 32.869 32.869 2 7.5463E-36 7708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 175.68 126.89 99.207 40.76 81.065 81.731 112.29 28.788 93 42 78 79 111 28 3 2 4 3 2 1 44131 19981 2638 19242 46167;46168;46169;46170 53435;53436;53437;53438;53439 53438 5 TTPLPDGQILDHR Unmodified 1461.7576 0.75759147 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 8.5 4.5 1 1 52.029 52.029 3 4.8473E-05 17425 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.734 71.297 109.3 28.427 0 0 112.15 115.13 102 28 0 0 111 111 2 1 0 0 2 2 16209 19982 2629 19243 46171;46172 53440;53441 53440 2 TTPPSVFFPVFVR Unmodified 1492.8078 0.80783613 503 D3Z7A7;E9PXE6;F8VPR2;A2AQW2;Q6ZPF4;A2APV2 Fmnl3;Fmnl2 Formin-like protein 3;Formin-like protein 2 yes no 0 0 0 0 11.5 0.5 1 1 85.085 85.085 3 7.9786E-05 26733 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.925 77.035 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 6031.9 19983 503 19244 46173;46174 53442;53443 53442 2 TTPQYMEGMEQVFEQCQQFEEK Unmodified 2766.1612 0.16115297 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 4.67 0.943 2 1 82.333 82.333 3;4 6.758E-13 31108 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.143 53.735 20.265 8.9157 108.93 17.848 37.714 38.366 19 9 102 19 37 37 1 1 3 1 1 2 8291.2 19984 2133 19245 46175;46176;46177 53444;53445;53446 53445 3 TTPSVVAFTADGER Unmodified 1449.71 0.70997257 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 5.5 0.5 1 1 57.472 57.472 2 0.00012883 18883 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.03 65.501 129.18 53.851 64.274 125.64 147.75 67.777 121 56 65 121 149 65 2 1 1 2 2 1 23766 19985 1533 19246 46178;46179 53447;53448 53448 2 TTPSYVAFTDTER Unmodified 1486.694 0.69398816 1762;1397;1407;1394 P17156;P63017;Q504P4;D3Z5E2;Q61696;P17879;P16627 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like no no 0 0 0 0 6.57 2.77 1 2 2 1 1 56.113 56.113 2;3 2.227E-27 18872 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 176.78 140.25 831.93 520.26 555.53 656.35 530.14 787.31 780 546 550 632 545 751 6 7 4 6 5 6 644700 19986 1397;1762;1407;1394 19247 46180;46181;46182;46183;46184;46185;46186 53449;53450;53451;53452;53453;53454;53455;53456 53450 8 TTPTGWTLDQCIQTGVDNPGHPFIK Unmodified 2782.3385 0.33846413 1490 P30275;A2ARP5;B0R0E9;B0R0F0;B0R0E8 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 8.5 2.22 1 1 2 1 1 72.524 72.524 3;4 3.7725E-21 25155 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.239 67.039 292.18 266.21 268.33 227.09 212.76 309.46 278 260 260 213 213 296 4 5 4 4 3 4 107020 19987 1490 19248 46187;46188;46189;46190;46191;46192 53457;53458;53459;53460;53461;53462;53463 53459 7 TTQGLTALLLSLK Unmodified 1357.8181 0.81806646 1849 P97390 Vps45 Vacuolar protein sorting-associated protein 45 yes yes 0 0 0 0 4.67 5.19 2 1 93.909 93.909 3 0.00046419 33373 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 67.275 42.484 54.233 27.147 59.428 32.014 53.967 0 51 28 58 33 53 0 3 1 3 2 3 0 10094 19988 1849 19249 46193;46194;46195 53464;53465;53466 53465 3 TTQIGCLLR Unmodified 1060.5699 0.56991404 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.5 0.5 1 1 56.873 56.873 2 0.0010269 17167 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 106.91 50.364 229.39 149.14 480.49 451.48 449.48 531.9 216 159 472 447 467 511 1 1 2 2 2 2 57223 19989 1401 19250 46196;46197 53467;53468 53467 2 TTQVPQYILDDFIQNDR Unmodified 2065.0116 0.011633904 16 A0A087WPL5;E9QNN1;O70133;Q3UR42;A0A0R4J2C3 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 5.5 0.5 1 1 83.93 83.93 3 0.00018442 31850 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.024 40.946 29.833 17.866 20.257 37.48 35.105 24.136 28 19 21 36 36 23 1 1 1 2 2 1 12317 19990 16 19251 46198;46199 53469;53470 53469 2 TTSASSVK Unmodified 779.4025 0.40249759 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 7 0 1 33.019 33.019 2 0.0080597 6647 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.83 36.84 0 29.792 0 0 37.384 38.375 0 28 0 0 37 37 0 1 0 0 1 1 2091.8 19991 1464;860 19252 46200 53471 53471 1 TTSDLLLVMSNLYSLNAGSLTMSEK Unmodified 2687.3398 0.33976926 2783 Q91ZJ5 Ugp2 UTP--glucose-1-phosphate uridylyltransferase yes yes 0 0 0 0 11 0 2 105.73 105.73 3;4 2.9478E-07 34898 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.79 38.775 0 0 6.492 0 9.414 14 0 0 6 0 9 14 0 0 1 0 1 1 5813.7 19992 2783 19253 46201;46202 53472;53473;53474 53472 3 TTSEVWLIDGLSPWDPPVLIQK Unmodified 2493.3155 0.31552706 2490 Q8C167 Prepl Prolyl endopeptidase-like yes yes 0 0 0 0 9.33 2.62 1 1 1 100.5 100.5 4 4.2863E-11 35688 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.414 55.159 28.48 11.798 28.802 0 0 0 28 12 28 0 0 0 2 1 2 0 0 0 4163.7 19993 2490 19254 46203;46204;46205 53475;53476;53477 53476 3 TTSLELFMYLNEVAGK Unmodified 1814.9124 0.91243713 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 10 0 1 95.288 95.288 3 9.5676E-08 31114 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.79 88.243 26.825 0 0 0 41.84 0 25 0 0 0 40 0 1 0 0 0 1 0 3126.3 19994 1393 19256 46206 53478 53478 1 TTSSTLK Unmodified 736.39668 0.39668393 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 7.5 0.5 1 1 36.177 36.177 2 0.027165 7466 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.626 55.441 39.468 105.87 0 60.025 120.19 105.3 37 102 0 56 121 102 1 2 0 1 2 2 9705.9 19995 1044 19257 46207;46208 53479;53480 53480 2 TTTGSYIANR Unmodified 1082.5356 0.53563702 2081 Q60692 Psmb6 Proteasome subunit beta type-6 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 36.506 36.506 2 4.082E-05 9588 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 118.71 73.222 207.47 141.03 210.19 173.23 163.89 286.34 195 149 208 172 167 273 3 4 3 3 2 4 29802 19996 2081 19258 46209;46210;46211;46212 53481;53482;53483;53484 53484 4 TTTLALMFGLYEDLSR Unmodified 1829.9233 0.92333617 485 A2AKW0;Q5HZI9;G3UYJ3;A2AKV9 Slc25a51 Solute carrier family 25 member 51 yes no 0 0 0 0 11 0 1 104.34 104.34 3 0.030374 34543 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.757 23.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19997 485 19259 46213 53485 53485 1 TTTLTTTQR Unmodified 1021.5404 0.54038805 1481 P28738 Kif5c Kinesin heavy chain isoform 5C yes yes 0 0 0 0 6.5 0.5 1 1 33.602 33.602 2 0.00022584 7636 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130.31 83.885 69.745 0 38.774 68.072 35.225 48.031 65 0 37 65 37 46 1 0 1 2 1 1 6846.2 19998 1481 19260 46214;46215 53486;53487 53486 2 TTTNEELEDMLESGK Oxidation (M) 1711.7458 0.74582531 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 0 1 0 3 0.816 1 1 1 58.5 58.5 3 0.00020245 20026 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 87.519 63.585 29.744 66.699 27.231 28.632 46.19 48.248 28 65 28 28 47 46 1 2 1 1 2 1 7201.2 19999 1696 19261 46216;46217;46218 53488;53489;53490 53488 126 3 TTTNEELEDMLESGK Unmodified 1695.7509 0.75091069 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 0 0 0 3.5 0.5 2 2 71.305 71.305 3;4 7.2125E-26 25846 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 147.12 104.8 296.52 238.55 300.81 139.95 431.76 333.06 278 241 297 140 426 324 5 4 5 3 5 5 107410 20000 1696 19261 46219;46220;46221;46222 53491;53492;53493;53494;53495;53496;53497 53495 7 TTTNEELEDMLESGK Deamidation (N) 1696.7349 0.73492628 1696 P61264;A0A0U1RNT8 Stx1b Syntaxin-1B yes no 0 1 0 0 3 0 2 72.38 72.38 3 7.296E-05 26991 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.018 29.404 29.904 27.776 0 0 0 39.442 28 28 0 0 0 37 1 1 0 0 0 1 2854 20001 1696 19261 46223;46224 53498;53499 53498 658 2 TTTNVLGDSLGAGIVEHLSR Unmodified 2039.0647 0.064732107 1643 P56564 Slc1a3 Excitatory amino acid transporter 1 yes yes 0 0 0 0 7.33 1.25 1 1 1 71.356 71.356 3 1.1759E-38 24549 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.3 115.76 227.31 44.896 247.67 183.37 216.82 203 213 46 240 185 222 195 2 1 3 3 3 2 87718 20002 1643 19262 46225;46226;46227 53500;53501;53502 53501 3 TTTPDVAHPK Unmodified 1065.5455 0.54547343 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 13 0 1 35.598 35.598 3 0.020659 9267 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.606 26.993 78.31 81.112 114.84 0 0 88.478 74 83 111 0 0 83 1 1 1 0 0 1 2767.6 20003 2028 19263 46228 53503 53503 1 TTTPGETK Unmodified 833.41306 0.41306227 3077 Q9D7A8 Armc1 Armadillo repeat-containing protein 1 yes yes 0 0 0 0 6 0 1 32.841 32.841 2 0.017312 7297 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.219 29.341 0 14.567 19.684 0 28.291 29.041 0 14 19 0 28 28 0 1 1 0 1 1 2161.7 20004 3077 19264 46229 53504 53504 1 TTTTPEVK Unmodified 875.46001 0.46001246 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 39.327 39.327 2 0.0026675 10870 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.02 70.899 304.77 291.8 467.56 176.1 424.94 579.25 288 299 456 177 418 554 3 2 2 2 3 3 48923 20005 1382 19265 46230;46231;46232;46233 53505;53506;53507;53508 53505 4 TTTVATDYDNIEIQQQYSDVNNR Acetyl (Protein N-term);Deamidation (N) 2730.2257 0.22566202 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 1 1 0 0 1.8 0.748 2 2 1 71.421 71.421 3 2.3312E-16 24057 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.366 44.205 0 14.896 9.738 10.93 0 31.98 0 14 9 10 0 30 0 2 1 1 0 3 17975 20006 2148 19266 46234;46235;46236;46237;46238 53509;53510;53511;53512;53513 53509 845 5 TTTVATDYDNIEIQQQYSDVNNR Acetyl (Protein N-term) 2729.2416 0.24164643 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 1 0 0 0 2.5 0.5 1 1 69.912 69.912 3 9.6362E-19 25357 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.66 73.324 0 0 20.173 8.6347 0 9 0 0 19 9 0 9 0 0 1 1 0 1 37299 20007 2148 19266 46239;46240 53514;53515 53514 2 TTTVVNVEGDALGAGILNHLNQK Unmodified 2363.2445 0.24448739 1213 O35874;Q5SSP3 Slc1a4 Neutral amino acid transporter A;Amino acid transporter yes no 0 0 0 0 7 0 1 74.82 74.82 4 1.1244E-06 26136 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.142 47.772 0 0 36.528 78.705 0 0 0 0 37 74 0 0 0 0 1 1 0 0 2282.7 20008 1213 19267 46241 53516 53516 1 TTTWEDPR Unmodified 1004.4563 0.45632407 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 4 0 1 42.342 42.342 2 0.044876 12641 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.306 31.179 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20009 844 19268 46242 53517 53517 1 TTVFSCNLGEK Unmodified 1254.5914 0.59143734 1887 Q05816 Fabp5 Fatty acid-binding protein, epidermal yes yes 0 0 0 0 9.2 2.04 1 1 2 1 58.551 58.551 2;3 1.6905E-09 20223 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 134.13 96.786 336.97 217.01 168.04 191.81 166.65 66.966 316 222 167 185 166 65 4 3 3 4 2 1 40710 20010 1887 19269 46243;46244;46245;46246;46247 53518;53519;53520;53521;53522 53522 5 TTVGVDGSLYK Unmodified 1138.587 0.58700389 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.8 4.35 1 1 1 1 1 55.78 55.78 2;3 2.2172E-16 17278 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 167.67 119.93 255.79 270.23 371.04 283.91 362.3 395.81 241 269 370 279 371 381 2 2 3 3 3 3 79257 20011 1055 19270 46248;46249;46250;46251;46252 53523;53524;53525;53526;53527 53525 5 TTVLAAVAFLDAFQK Unmodified 1593.8766 0.87664397 2229 Q6P9S0 Mtss1l MTSS1-like protein yes yes 0 0 0 0 4.67 5.19 2 1 102.59 102.59 3 2.4216E-07 34088 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.35 79.497 3.204 6.0828 21.321 10.535 20.573 15.396 3 6 20 10 20 15 1 2 2 2 2 2 4713.4 20012 2229 19271 46253;46254;46255 53528;53529;53530;53531 53528 4 TTVLLADMNDFGTVNEIYK Unmodified 2143.0507 0.050721527 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 8.2 2.48 1 2 1 1 87.291 87.291 3;4 2.8654E-08 34284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.975 64.095 59.989 68.934 38.634 56.902 115.74 49.016 56 66 38 55 112 47 3 4 2 4 4 2 12331 20013 1611 19272 46256;46257;46258;46259;46260 53532;53533;53534;53535;53536;53537 53537 6 TTVTLAHLLAAR Unmodified 1265.7456 0.74557022 2321 Q80VD1 Fam98b Protein FAM98B yes yes 0 0 0 0 11 0 1 61.674 61.674 3 2.1096E-05 16260 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.345 39.589 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 15292 20014 2321 19273 46261 53538 53538 1 TTVVAQLK Unmodified 858.51747 0.51746776 1667 P60229 Eif3e Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 0 8.5 0.5 1 1 52.824 52.824 2 0.01144 14428 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.429 28.391 128.48 56.275 0 130.35 43.177 205.57 120 56 0 120 46 194 2 1 0 2 1 2 8302.7 20015 1667 19274 46262;46263 53539;53540 53540 2 TTVYVVEDQR Unmodified 1208.6037 0.60371659 697 D3YVS7;Q8K353 Cystm1 Cysteine-rich and transmembrane domain-containing protein 1 yes no 0 0 0 0 4.5 0.5 1 1 46.785 46.785 2 3.4115E-05 14413 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.33 91.717 0 20.216 0 0 37.018 49.046 0 19 0 0 37 47 0 1 0 0 1 1 4421.3 20016 697 19275 46264;46265 53541;53542 53542 2 TTWLHQALR Unmodified 1124.6091 0.60907674 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 11 0 1 49.292 49.292 2 0.051583 11349 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.432 15.402 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20017 114 19276 46266 53543 53543 1 TTWLLLK Unmodified 873.53239 0.53238955 878 E9Q0W6;E9Q4K0;Q8BL65;F6UI99;F6VVW4;D3Z0Y4;F7A5C5 Ablim2 Actin-binding LIM protein 2 yes no 0 0 0 0 12.5 0.5 1 1 75.978 75.978 2 0.0095702 20271 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.96 38.109 508.72 71.273 641.77 571.8 107.94 542.71 478 74 623 560 111 512 2 1 2 2 1 2 62415 20018 878 19277 46267;46268 53544;53545 53544 2 TTYLEFIQQNEER Acetyl (Protein N-term) 1711.8053 0.80532952 880 E9Q1S3;Q01405 Sec23a Protein transport protein Sec23A yes no 1 0 0 0 4 0 1 84.24 84.24 2 1.3293E-18 31975 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.658 54.404 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2242.5 20019 880 19278 46269 53546 53546 1 TTYLVLDEADR Unmodified 1294.6405 0.64049603 2135 Q8BTS0;Q61656;S4R1I6 Ddx5 Probable ATP-dependent RNA helicase DDX5 yes no 0 0 0 0 7 3.54 1 1 1 1 61.251 61.251 2 0.0022416 21467 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.335 49.381 168.72 26.036 115.14 83.934 91.435 136.76 158 28 112 83 93 130 4 1 3 2 2 3 17313 20020 2135 19279 46270;46271;46272;46273 53547;53548;53549;53550 53548 4 TTYPCSCEK Unmodified 1144.4529 0.45289495 1538 P40237;A2AIJ1 Cd82 CD82 antigen;Tetraspanin yes no 0 0 0 0 6 0 1 39.315 39.315 3 0.02355 10372 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.938 30.074 0 0 60.592 0 58.576 0 0 0 56 0 56 0 0 0 1 0 1 0 2544 20021 1538 19280 46274 53551 53551 1 TVAELEAEK Unmodified 988.50769 0.50769094 2142 Q61941 Nnt NAD(P) transhydrogenase, mitochondrial yes yes 0 0 0 0 4 0 1 54.209 54.209 2 0.021075 18287 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.184 2.3557 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20022 2142 19281 46275 53552 53552 1 TVAGIIVEPIQSEGGDNHASDDFFR Unmodified 2673.2671 0.26707332 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 5.25 0.829 1 1 2 74.803 74.803 3;4 6.0534E-23 27030 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.633 78.318 118.81 75.109 20.51 20.767 8.727 59.447 111 75 19 19 9 56 3 2 1 1 1 3 26238 20023 1702 19282 46276;46277;46278;46279 53553;53554;53555;53556 53555 4 TVAIPSGESQINQIALNPTGTFLYAASGNAVR Unmodified 3259.6837 0.68370483 875 F8WGN6;E9Q0J5;Q9QXL2;A0A2R8VJN0 Kif21a Kinesin-like protein;Kinesin-like protein KIF21A yes no 0 0 0 0 8.5 0.5 1 1 87.544 87.544 3;4 0.00028703 31607 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.752 27.543 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1737.2 20024 875 19283 46280;46281 53557;53558 53557 2 TVANMIK Unmodified 775.42621 0.42620992 3325 Q9WTX5;E9PUV4 Skp1;Skp1a S-phase kinase-associated protein 1 yes no 0 0 0 0 9 0.816 1 1 1 52.271 52.271 2 0.035629 12566 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.784 17.237 162.11 253.36 102.2 403.37 254.2 331.73 152 250 102 379 267 318 1 2 1 2 1 1 33380 20025 3325 19284 46282;46283;46284 53559;53560;53561 53561 3 TVATFILQK Unmodified 1019.6015 0.60153174 3238 Q9JKY0 Rqcd1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 0 11.5 0.5 1 1 71.117 71.117 2 0.0012364 18200 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.635 59.824 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20026 3238 19285 46285;46286 53562;53563 53563 2 TVATGDPVDEAAALPGHPQDTYDPEADHECCER Unmodified 3622.5213 0.52126847 1775 P63141 Kcna2 Potassium voltage-gated channel subfamily A member 2 yes yes 0 0 0 0 1 0 1 55.614 55.614 5 0.011834 17484 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 27.792 26.089 0 9.4451 7.8288 30.137 0 9.594 0 9 9 28 0 9 0 1 1 1 0 1 2134.3 20027 1775 19286 46287 53564 53564 1 TVATPLNQVANPNSAIFGGAR Unmodified 2097.0967 0.096700937 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 11 2 1 1 70.135 70.135 3 1.0675E-09 26012 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.975 59.9 49.358 0 49.772 59.847 72.346 106.67 46 0 46 56 74 102 1 0 1 1 1 2 32732 20028 3333 19287 46288;46289 53565;53566 53566 2 TVATPLNQVANPNSAIFGGARPR Unmodified 2350.2506 0.25057582 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 1 10 0.816 1 1 1 63.166 63.166 3 5.3634E-22 17410 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.4 103.48 55.464 30.824 29.731 30.604 61.772 58.62 52 32 28 28 60 56 3 2 1 1 2 2 33592 20029 3333 19288 46290;46291;46292 53567;53568;53569 53568 3 TVAYTEK Unmodified 810.41233 0.41233399 1470 P27773 Pdia3 Protein disulfide-isomerase A3 yes yes 0 0 0 0 8.67 3.09 1 1 1 41.743 41.743 2 0.0095133 10780 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.08 30.817 558.11 365.21 435.65 250.51 453.7 376.3 523 366 417 241 455 361 4 4 4 3 4 4 33864 20030 1470 19289 46293;46294;46295 53570;53571;53572;53573;53574;53575 53573 6 TVCFQNLR Unmodified 1036.5124 0.51239916 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 8 0 1 51.769 51.769 2 0.012291 14705 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.191 43.03 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20031 2282 19290 46296 53576 53576 1 TVCGVVSK Unmodified 848.44259 0.44258826 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 45.854 45.854 2;3 0.0060906 11904 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.41 52.122 523.44 316.37 664.02 615.03 179.52 612.09 493 329 659 602 185 579 3 2 3 3 1 3 90915 20032 1055 19291 46297;46298;46299;46300 53577;53578;53579;53580 53578 4 TVCVEMGDVESAF Unmodified 1442.6058 0.60576678 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 4 0 1 81.828 81.828 2 0.059545 30865 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 45.161 17.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20033 1958 19292 46301 53581 53581 1 TVDDLEIIYDELLHIK Unmodified 1928.0143 0.014259666 516 A2ASW8;Q9EQZ6 Rapgef4 Rap guanine nucleotide exchange factor 4 yes no 0 0 0 0 6 0 1 99.598 99.598 3 0.00012682 37115 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.377 45.299 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20034 516 19293 46302 53582 53582 1 TVDESAR Unmodified 776.36645 0.36644643 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 4.75 4.82 1 1 1 1 25.496 25.496 2 0.0044703 5235 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 147.69 46.482 0 209.71 141.81 150.83 362.59 113.6 0 199 144 148 357 111 0 3 3 2 4 2 47070 20035 3241 19294 46303;46304;46305;46306 53583;53584;53585;53586 53585 4 TVDETDNLTEVSSGEQLDASGLEAETLNK Unmodified 3064.4208 0.42079259 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 3 0 1 75.703 75.703 4 1.4414E-08 28436 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.858 46.892 0 19.548 39.943 0 0 9.594 0 19 38 0 0 9 0 1 1 0 0 1 2238.8 20036 2204 19295 46307 53587 53587 1 TVDGPSGK Unmodified 759.37628 0.37628284 1395;3448;3454 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;V9GXA7;S4R1W1;V9GX06 Gapdh;Gm15294;Gm3839;Gm11214 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 7.88 2.85 1 1 1 1 1 1 1 1 35.789 35.789 2 0.00065979 8015 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 150.4 80.967 7510.9 7125.2 7523.7 8774 10417 9833.3 7075 7285 7729 8599 10614 9497 12 11 10 10 11 10 1909100 20037 1395;3448;3454 19296 46308;46309;46310;46311;46312;46313;46314;46315 53588;53589;53590;53591;53592;53593;53594;53595;53596;53597;53598;53599;53600 53595 13 TVDGTAR Unmodified 718.36097 0.36096712 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 4.5 0.5 1 1 24.145 24.145 2 0.022697 4282 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.91 29.492 49.102 91.419 29.063 0 0 0 46 94 28 0 0 0 1 3 1 0 0 0 25895 20038 2619 19297 46316;46317 53601;53602;53603 53601 3 TVDIGVVTAEDALNYGFSGVMLR Unmodified 2426.2152 0.21516109 2754 Q91WD5;D3YXT0 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 98.56 98.56 3 0.00045986 36157 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.927 33.397 19.161 23.362 28.048 23.377 4.8202 10.66 18 23 28 23 5 10 2 2 2 3 1 1 4661.4 20039 2754 19298 46318;46319 53604;53605;53606 53605 3 TVDLKPDWGK Unmodified 1157.6081 0.60807369 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 1 9 0 1 59.339 59.339 3 0.052067 17616 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.701 25.822 168.95 116.29 0 213.14 0 218.53 158 120 0 195 0 205 1 1 0 1 0 1 18621 20040 2092 19299 46320 53607 53607 1 TVDLVELER Unmodified 1072.5764 0.57643921 3137 Q9DC61 Pmpca Mitochondrial-processing peptidase subunit alpha yes yes 0 0 0 0 4 0 1 62.338 62.338 2 0.012187 22041 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.643 38.554 39.342 0 60.394 0 46.807 38.106 37 0 56 0 46 37 1 0 1 0 1 1 3240 20041 3137 19300 46321 53608 53608 1 TVDNFVALATGEK Unmodified 1363.6983 0.69834526 1444 P24369 Ppib Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 9.25 2.28 1 1 1 1 75.86 75.86 3 0.00014505 26690 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.321 47.104 149.18 158.36 151.16 137.74 157.87 185.85 140 158 148 130 158 177 4 4 3 3 3 3 33346 20042 1444 19301 46322;46323;46324;46325 53609;53610;53611;53612;53613 53609 5 TVDWALAEYMAFGSLLK Unmodified 1913.9597 0.95972167 2074;628 B2RXT3;E9Q7L0;Z4YJV4;Q60597 Ogdhl;Ogdh 2-oxoglutarate dehydrogenase, mitochondrial no no 0 0 0 0 11.2 1.79 1 1 2 107.97 107.97 3;4 8.9514E-14 37301 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.92 97.588 19.136 30.213 21.239 14.468 7.7193 8.3077 18 29 20 14 8 8 2 2 2 2 1 1 7235.5 20043 628;2074 19302 46326;46327;46328;46329 53614;53615;53616;53617 53614 4 TVEALYK Unmodified 822.44872 0.4487195 2715 Q8VEM8;G5E902 Slc25a3 Phosphate carrier protein, mitochondrial yes no 0 0 0 0 8.5 2.69 1 1 1 1 53.24 53.24 2 0.0057364 16093 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.77 56.133 1007 291.25 746.86 799.13 356.87 366.51 944 335 744 778 380 351 4 3 4 4 3 3 63850 20044 2715 19303 46330;46331;46332;46333 53618;53619;53620;53621 53619 4 TVEEAAQLALDYMK Unmodified 1580.7756 0.7756093 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 8.67 3.09 1 1 1 90.324 90.324 3 3.8529E-05 35663 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.776 47.338 49.063 9.576 88.794 17.163 67.202 99.138 46 9 83 19 65 93 1 1 2 1 1 2 16641 20045 2487 19304 46334;46335;46336 53622;53623;53624 53624 3 TVEEAENIVVTTGVVR Unmodified 1714.9101 0.91012895 3356 Q9Z0F7 Sncg Gamma-synuclein yes yes 0 0 0 0 4 0 1 70.242 70.242 3 0.0018536 25431 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 49.224 28.843 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 3874.2 20046 3356 19305 46337 53625 53625 1 TVEESSR Unmodified 806.37701 0.37701112 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 1.5 0.5 1 1 22.648 22.648 2 0.0019953 4065 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 153.73 76.352 58.986 181.92 81.573 275.23 217.36 216.59 56 176 88 260 227 209 1 2 1 2 2 2 22860 20047 3341 19306 46338;46339 53626;53627 53627 2 TVEETVR Unmodified 832.42905 0.42904669 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3 0 1 33.236 33.236 2 0.012751 8826 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.18 58.49 0 98.276 40.432 77.304 62.12 67.517 0 93 46 74 65 65 0 1 1 1 1 1 7558.3 20048 3032 19307 46340 53628 53628 1 TVEEVLGHFGVNESTGLSLEQVK Unmodified 2471.2544 0.25438337 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 7 0 2 81.582 81.582 3;4 3.4051E-16 29370 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.812 71.612 0 38.766 36.033 37.598 36.975 0 0 37 37 37 37 0 0 1 1 1 1 0 3442.2 20049 1242 19308 46341;46342 53629;53630 53629 2 TVEEYGR Unmodified 852.39775 0.39774656 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 3 0 1 34.143 34.143 2 0.027191 9302 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 91.9 24.907 48.739 44.549 66.296 25.041 85.668 0 46 46 65 28 83 0 1 1 1 1 1 0 4584 20050 893 19309 46343 53631 53631 1 TVEGAGNIAAATGFVK Unmodified 1504.7886 0.78855725 1232 O55042 Snca Alpha-synuclein yes yes 0 0 0 0 8.27 3.16 1 1 3 1 1 1 1 1 1 66.882 66.882 2;3;4 3.7861E-58 24285 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 194.59 154.16 549.13 469.27 518.54 671.63 705.31 665.77 515 460 508 647 716 637 7 6 6 9 8 7 324250 20051 1232 19310 46344;46345;46346;46347;46348;46349;46350;46351;46352;46353;46354 53632;53633;53634;53635;53636;53637;53638;53639;53640;53641;53642;53643 53643 12 TVEGAGNIAAATGFVK Deamidation (N) 1505.7726 0.77257283 1232 O55042 Snca Alpha-synuclein yes yes 0 1 0 0 9 0 1 66.845 66.845 3 0.0002753 21083 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.576 44.695 147.31 140.11 189.86 147.41 161.76 209.65 139 144 190 148 168 201 1 1 1 1 1 1 44403 20052 1232 19310 46355 53644 53644 336 1 TVEGALK Unmodified 716.40685 0.40685468 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A1B0GX08 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 6.33 0.471 2 1 45.685 45.685 2;3 0.013377 13318 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.715 13.903 285 300.15 435.34 308.1 313.9 406.78 269 307 433 309 326 390 2 3 3 2 2 3 41042 20053 2517 19311 46356;46357;46358 53645;53646;53647 53645 3 TVEINGEK Deamidation (N) 889.43928 0.43927702 2250;2817 Q6PHN9;Q923S9;A0A140LHW9 Rab35;Rab30 Ras-related protein Rab-35;Ras-related protein Rab-30 no no 0 1 0 0 4 0 1 47.488 47.488 2 0.053889 15053 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.13 56.883 117.97 89.089 114.16 0 102.73 115.39 111 93 111 0 102 111 1 1 1 0 1 1 8777.9 20054 2250;2817 19312 46359 53648 53648 892 1 TVELQGK Unmodified 773.42832 0.42831841 1684 P61027 Rab10 Ras-related protein Rab-10 yes yes 0 0 0 0 6 0 1 45.747 45.747 2 0.027379 13395 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.299 27.387 108.35 99.557 99.581 95.714 0 127.92 102 102 102 93 0 120 1 1 1 1 0 1 9681.3 20055 1684 19313 46360 53649 53649 1 TVEMHNK Unmodified 857.40654 0.40653711 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 5.5 0.5 1 1 32.261 32.261 3 0.005339 6987 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 92.187 54.101 171.26 84.41 179.09 0 113.24 174.79 161 93 171 0 114 167 1 1 1 0 1 1 12707 20056 1055 19314 46361;46362 53650;53651 53651 2 TVENIKDPLFR Unmodified 1330.7245 0.72450043 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 8 0 1 59.641 59.641 3 0.0041035 18435 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.212 37.87 0 96.372 154.35 0 0 148.17 0 93 148 0 0 139 0 1 1 0 0 1 12087 20057 3204 19315 46363 53652 53652 1 TVENVTVFGTASASK Unmodified 1509.7675 0.76748745 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 7.5 0.5 1 1 61.483 61.483 3 0.00071155 19286 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.728 32.079 108.38 149.29 52.408 156.74 101.11 155.95 102 148 56 148 102 149 2 2 1 2 1 2 11533 20058 2162 19316 46364;46365 53653;53654 53654 2 TVESEAASYLDQISR Unmodified 1667.8002 0.80024414 421 A2A4J1;P61290 Psme3 Proteasome activator complex subunit 3 yes no 0 0 0 0 4 0 1 73.104 73.104 3 0.00038374 26773 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.842 41.238 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1656.6 20059 421 19317 46366 53655 53655 1 TVESQLYTNPDSR Unmodified 1508.7107 0.71070086 343 A0A1Y7VLY2;P59764 Dock4 Dedicator of cytokinesis protein 4 yes no 0 0 0 0 4 0 1 47.552 47.552 3 0.011053 15164 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.457 20.707 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 2479.2 20060 343 19318 46367 53656 53656 1 TVETPVVR Unmodified 899.50763 0.50763136 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 6 0 1 41.908 41.908 2 0.008726 11573 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.097 43.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20061 556 19319 46368 53657 53657 1 TVEVLEPEVTK Unmodified 1242.6707 0.67073352 2057;2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05;Q5SQX6 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 6.75 3.63 1 2 1 61.674 61.674 2;3 1.8635E-07 21590 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.06 55.71 118.23 111.82 183.33 0 116.15 29.31 111 112 176 0 112 28 3 3 4 0 4 1 29778 20062 2282;2057 19320 46369;46370;46371;46372 53658;53659;53660;53661;53662 53661 5 TVEVPEDEVVR Unmodified 1270.6405 0.64049603 820 E9PUX0;F6ZQL0;F6QFT1;F6QHD1;Q80WJ7 Mtdh Protein LYRIC yes no 0 0 0 0 2 0 1 52.241 52.241 2 0.0023382 17183 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 80.706 54.264 39.524 0 29.762 7.5188 28.943 0 37 0 28 9 28 0 1 0 1 1 1 0 2295.2 20063 820 19321 46373 53663 53663 1 TVEVPYKGDVENTILDILGGLR Unmodified 2400.29 0.2900406 3157 Q9DCZ1 Gmpr GMP reductase 1 yes yes 0 0 0 1 8.67 0.471 1 2 101.2 101.2 3;4 5.4102E-09 35829 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.95 47.019 40.217 21.868 13.695 34.83 22.458 0 38 23 14 33 23 0 3 2 1 2 2 0 4661.7 20064 3157 19322 46374;46375;46376 53664;53665;53666 53664 3 TVFAEHISDECK Unmodified 1434.6449 0.64492948 1467 P27659;A0A087WNS0;A0A087WQK0 Rpl3 60S ribosomal protein L3 yes no 0 0 0 0 5 0 1 50.688 50.688 3 0.0028719 16357 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.448 33.708 39.701 0 0 69.68 72.59 46.965 37 0 0 65 74 46 1 0 0 1 1 1 4610 20065 1467 19323 46377 53667 53667 1 TVFAEHISDECKR Unmodified 1590.746 0.7460405 1467 P27659;A0A087WNS0;A0A087WQK0 Rpl3 60S ribosomal protein L3 yes no 0 0 0 1 6 0 1 44.626 44.626 4 0.0061024 12842 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.659 27.706 49.128 45.631 0 59.86 71.686 86.432 46 46 0 56 74 83 1 1 0 1 1 1 2986.7 20066 1467 19324 46378 53668 53668 1 TVFDEAIR Unmodified 949.4869 0.48689592 1759;1675 Q3TLP8;P63001;Q05144;A0A2R8VHH0;P60764;A2AC13 Rac1;Rac2;Rac3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 0 8 3.56 1 1 1 56.708 56.708 2 0.0016174 19365 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.08 63.663 195.66 365.88 301.17 357.06 459 350.42 185 361 299 351 466 338 2 3 2 3 3 2 165830 20067 1759;1675 19325 46379;46380;46381 53669;53670;53671 53669 3 TVFEALQAPACHENLVK Unmodified 1925.9669 0.96693232 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.75 2.49 2 1 1 65.985 65.985 3;4 6.3542E-06 23828 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.429 66.335 276.62 233.42 224.84 227.45 133.07 351.18 259 231 222 222 139 333 3 3 2 2 2 3 55467 20068 1401 19326 46382;46383;46384;46385 53672;53673;53674;53675 53675 4 TVFFWAPIMK Unmodified 1238.6522 0.65218711 3015 Q9D023 Mpc2 Mitochondrial pyruvate carrier 2 yes yes 0 0 0 0 1 0 1 91.413 91.413 2 0.0063915 32472 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 72.879 45.764 29.959 0 14.365 14.192 13.493 14.539 28 0 14 14 14 14 1 0 1 1 1 1 1126.9 20069 3015 19327 46386 53676 53676 1 TVFGVEPDLTR Unmodified 1232.6401 0.6401021 3038 Q9D1A2 Cndp2 Cytosolic non-specific dipeptidase yes yes 0 0 0 0 8.67 3.09 1 1 1 64.988 64.988 2;3 4.7732E-06 22398 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.34 43.916 128.78 135.45 179.52 129.65 163.4 155.24 121 131 177 130 167 149 3 4 4 4 5 3 21821 20070 3038 19328 46387;46388;46389 53677;53678;53679;53680;53681 53677 5 TVFTEQPTWVIDPIDGTTNFVHR Unmodified 2672.3235 0.32346599 2819 Q924B0;Q80ZJ2;A0A0A6YW07 Impa1 yes no 0 0 0 0 10 3 2 2 83.503 83.503 3;4 5.2335E-15 30339 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.314 67.512 99.433 25.098 38.646 27.793 83.96 76.488 93 28 37 28 84 74 2 1 1 1 2 2 19787 20071 2819 19329 46390;46391;46392;46393 53682;53683;53684;53685 53683 4 TVGATALPK Unmodified 856.50182 0.5018177 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8 0 1 49.11 49.11 2 0.00050365 13468 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.23 62.231 177.04 181.42 208.02 166.6 187.95 0 167 185 210 167 187 0 1 1 1 1 1 0 15267 20072 1543 19330 46394 53686 53686 1 TVGGICQDYDSDK Unmodified 1456.614 0.61402328 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 4.33 0.471 2 1 51.365 51.365 2;3 0.00015876 16886 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.889 45.711 0 78.736 67.819 56.376 72.836 196.2 0 74 65 56 74 186 0 1 2 1 1 3 17478 20073 3371 19331 46395;46396;46397 53687;53688;53689 53687 3 TVGGICQDYDSDKR Unmodified 1612.7151 0.71513431 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 1 8 3.56 1 1 1 44.599 44.599 3 5.3325E-07 12919 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.55 97.715 275.61 343.71 95.345 209.82 301.77 222.03 259 342 93 195 305 213 3 3 1 2 3 2 32417 20074 3371 19332 46398;46399;46400 53690;53691;53692 53691 3 TVGHQFR Unmodified 843.43514 0.43513512 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 0 1 27.449 27.449 3 0.034632 4228 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.504 23.549 44.728 30.515 30.907 37.274 70.462 0 42 32 32 37 69 0 1 1 1 1 1 0 1674.9 20075 728 19333 46401 53693 53693 1 TVGIDDLTGEPLIQR Unmodified 1625.8625 0.86245047 3321 Q9WTP7;F6RP11 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 0 5 0.816 1 1 1 72.031 72.031 3 5.4411E-05 25727 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.673 73.613 49.766 66.704 114.17 37.583 0 78.884 47 65 111 37 0 74 2 2 3 1 0 2 19187 20076 3321 19334 46402;46403;46404 53694;53695;53696 53696 3 TVGLFLQGGK Unmodified 1018.5811 0.58113065 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 8.5 4.39 1 1 1 1 67.404 67.404 2;3 5.5243E-05 16730 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.06 72.269 454.25 95.732 435.99 112.33 0 548.37 426 102 415 112 0 519 2 1 3 2 0 4 67717 20077 2179 19335 46405;46406;46407;46408 53697;53698;53699;53700 53700 4 TVGMLSNMISFYDMAR Unmodified 1834.8416 0.84159715 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 11 0.816 1 1 1 91.341 91.341 3 5.8373E-12 29326 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.31 101.93 62.049 40.79 39.105 30.256 33.128 22.386 58 40 37 28 33 21 3 3 2 1 2 1 26183 20078 1596 19336 46409;46410;46411 53701;53702;53703;53704;53705 53704 5 TVGMVAGDEETYEVFAELFDPVIQER Oxidation (M) 2959.3797 0.37971982 1490 P30275;A2ARP5;B0R0E9;B0R0F0 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 1 0 5 0 1 104.16 104.16 3 1.0746E-22 36225 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.426 85.145 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 840.98 20079 1490 19337 46412 53706 53706 102 1 TVGMVAGDEETYEVFAELFDPVIQER Unmodified 2943.3848 0.3848052 1490 P30275;A2ARP5;B0R0E9;B0R0F0 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 9.25 3.77 1 1 2 108.23 108.23 3;4 8.3214E-35 36499 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.83 119.43 10.679 8.9279 19.596 4.8976 0 1.066 10 9 19 5 0 1 2 1 3 1 0 1 11408 20080 1490 19337 46413;46414;46415;46416 53707;53708;53709;53710;53711;53712 53707 6 TVGVEPAADGK Unmodified 1042.5295 0.52948901 1540 P41105 Rpl28 60S ribosomal protein L28 yes yes 0 0 0 0 4.5 0.5 1 1 45.376 45.376 2 2.6149E-06 13735 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.111 58.303 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20081 1540 19338 46417;46418 53713;53714 53714 2 TVIEPMASEGLR Unmodified 1301.6649 0.66493664 1096 G5E829;A0A1W2P867 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes no 0 0 0 0 8 3.56 1 1 1 57.776 57.776 2 3.8891E-20 19686 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 154.05 78.856 39.404 56.471 27.26 119.57 65.095 126.06 37 56 28 112 65 120 1 2 1 2 1 2 13960 20082 1096 19339 46419;46420;46421 53715;53716;53717 53715 3 TVIFTQGR Unmodified 920.50797 0.50796571 1626 P55264 Adk Adenosine kinase yes yes 0 0 0 0 9.5 0.5 1 1 49.238 49.238 2 0.0036352 12750 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.18 31.399 271.44 83.963 294.41 218.25 73.652 288.92 255 88 287 217 79 273 2 1 2 2 1 2 43004 20083 1626 19340 46422;46423 53718;53719 53718 2 TVIIEQSWGSPK Unmodified 1343.7085 0.70851601 1766 P63038;D3Z2F2;D3Z7J9 Hspd1 60 kDa heat shock protein, mitochondrial yes no 0 0 0 0 9.62 2.12 1 2 2 1 2 64.877 64.877 2;3 3.4774E-40 23355 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 196.16 129.89 424.9 365.17 387.73 371.78 365.55 651.55 399 370 388 360 372 621 6 5 5 4 3 7 183680 20084 1766 19341 46424;46425;46426;46427;46428;46429;46430;46431 53720;53721;53722;53723;53724;53725;53726;53727 53726 8 TVIIGEQEHR Unmodified 1180.62 0.62003536 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 0 5 0 1 38.145 38.145 3 8.0559E-06 10252 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.568 65.702 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20085 2403 19342 46432 53728 53728 1 TVISQSLSK Unmodified 961.54441 0.5444108 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 52.205 52.205 2 2.2518E-45 12572 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 209.6 135.98 1190.4 1267 941.42 1395.5 1225 1476 1120 1281 964 1347 1253 1414 6 8 5 7 5 7 349720 20086 1596 19343 46433;46434;46435;46436;46437 53729;53730;53731;53732;53733;53734;53735;53736 53733 8 TVIVNMVDVAK Unmodified 1187.6584 0.6583947 1661 P59325;Q8BVV6;A0A1Y7VNP4;A0A1Y7VJG2;A0A1Y7VLQ0 Eif5 Eukaryotic translation initiation factor 5 yes no 0 0 0 0 9 0 1 70.488 70.488 3 0.0048782 22900 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.7 29.777 49.225 26.473 0 0 66.701 37.539 46 28 0 0 65 37 1 1 0 0 1 1 3963.3 20087 1661 19344 46438 53737 53737 1 TVIVTPSQR Unmodified 999.57129 0.57129425 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39;A0A2I3BRX1;A0A2I3BQC6 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 42.786 42.786 2 0.008865 11163 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 76.827 16.237 49.063 29.315 78.062 0 95.96 38.375 46 28 74 0 93 37 1 1 2 0 2 1 10130 20088 172 19345 46439;46440 53738;53739 53738 2 TVIYWLAEVK Unmodified 1220.6805 0.68051035 1636 P56380 Nudt2 Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] yes yes 0 0 0 0 12 0 1 86.598 86.598 3 0.00066103 24316 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.865 43.572 0 29.792 0 40.441 0 0 0 28 0 37 0 0 0 1 0 1 0 0 2493.7 20089 1636 19346 46441 53740 53740 1 TVLADEEPLLDR Unmodified 1369.7089 0.70890994 2220 Q6P5E8 Dgkq Diacylglycerol kinase theta yes yes 0 0 0 0 3 0 1 64.556 64.556 2 1.4352E-07 23265 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 109.16 65.521 29.875 0 28.419 38.747 0 0 28 0 28 37 0 0 1 0 1 1 0 0 2719.7 20090 2220 19347 46442 53741 53741 1 TVLAISRPFISVK Unmodified 1429.8657 0.86568536 2403 Q8BHE3 Atcay Caytaxin yes yes 0 0 0 1 1 0 1 68.575 68.575 4 0.015802 23273 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.28 22.044 39.045 0 110.17 0 46.477 47.71 37 0 102 0 46 46 1 0 1 0 1 1 2616.4 20091 2403 19348 46443 53742 53742 1 TVLFLGTGDGQLLK Unmodified 1460.8239 0.82388012 3288 Q9QZC2 Plxnc1 Plexin-C1 yes yes 0 0 0 0 10 0 1 81.129 81.129 3 4.7832E-05 25589 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.69 67.126 0 68.431 43.613 46.086 84.701 0 0 65 46 46 83 0 0 1 1 1 1 0 3090.1 20092 3288 19349 46444 53743 53743 1 TVLGIGPGPVELIDEVTGHLK Unmodified 2143.1889 0.18886999 2654 Q8R2Y8 Ptrh2 Peptidyl-tRNA hydrolase 2, mitochondrial yes yes 0 0 0 0 8 0 1 95.145 95.145 3 0.0048899 34359 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.086 24.163 0 0 6.492 0 19.874 0 0 0 6 0 19 0 0 0 1 0 1 0 1494 20093 2654 19350 46445 53744 53744 1 TVLGVPEVLLGILPGAGGTQR Unmodified 2046.1837 0.18372503 2435 Q8BMS1 Hadha Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 99.063 99.063 3 2.8402E-24 32720 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 134.07 117.67 51.265 58.399 36.831 40.767 0 14.924 48 60 36 39 0 14 3 4 2 3 0 1 60853 20094 2435 19351 46446;46447;46448;46449;46450 53745;53746;53747;53748;53749;53750;53751;53752;53753;53754;53755 53750 11 TVLIMELINNVAK Oxidation (M) 1472.8273 0.82725094 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 1 0 5.64 5.37 8 1 5 95.168 95.168 2;3 1.2331E-11 25682 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.95 82.706 125.74 335.32 147.81 184 244.75 233.69 118 326 145 178 243 224 7 16 8 13 14 12 41232 20095 1642 19352 46451;46452;46453;46454;46455;46456;46457;46458;46459;46460;46461;46462;46463;46464 53756;53757;53758;53759;53760;53761;53762;53763;53764;53765;53766;53767;53768;53769;53770;53771;53772;53773;53774;53775;53776;53777;53778;53779 53770 114 24 TVLIMELINNVAK Unmodified 1456.8323 0.83233632 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.6 4.36 2 4 2 2 98.097 98.097 2;3;4 1.0389E-41 28027 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 197.07 142.29 1553.9 1223 1723 1060.4 1402.2 1723.1 1461 1266 1691 1074 1430 1654 14 16 14 17 10 15 390430 20096 1642 19352 46465;46466;46467;46468;46469;46470;46471;46472;46473;46474 53780;53781;53782;53783;53784;53785;53786;53787;53788;53789;53790;53791;53792;53793;53794;53795;53796;53797;53798;53799;53800;53801;53802;53803;53804 53795 25 TVLIMELINNVAK Deamidation (N) 1457.8164 0.8163519 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 1 0 0 10.4 1.5 1 4 4 4 3 95.746 95.746 2;3 1.1614E-19 32715 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 156.51 111.75 134.44 206.17 301.08 163.77 148.84 174.37 126 200 291 159 145 165 7 11 11 8 5 7 92785 20097 1642 19352 46475;46476;46477;46478;46479;46480;46481;46482;46483;46484;46485;46486;46487;46488;46489;46490 53805;53806;53807;53808;53809;53810;53811;53812;53813;53814;53815;53816;53817;53818;53819;53820;53821;53822;53823;53824;53825 53816 628;629 21 TVLITGANSGLGR Unmodified 1257.7041 0.70409934 3185 Q9ERI6 Rdh14 Retinol dehydrogenase 14 yes yes 0 0 0 0 9.5 0.5 1 1 56.193 56.193 2 2.376E-13 14294 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.68 44.2 0 9.576 28.57 59.505 0 20.254 0 9 28 56 0 19 0 1 1 2 0 1 6284 20098 3185 19353 46491;46492 53826;53827 53827 2 TVLLGVVEK Unmodified 956.59063 0.59063271 669 D3YTS3;Q68FD9 D630045J12Rik;Kiaa1549 UPF0606 protein KIAA1549 yes no 0 0 0 0 9 0 1 68.287 68.287 2 0.0070215 21805 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.148 31.3 59.575 0 86.215 73.863 99.992 96.285 56 0 83 74 102 93 1 0 1 1 1 1 5036.9 20099 669 19354 46493 53828 53828 1 TVLLSIQALLSAPNPDDPLANDVAEQWK Unmodified 3017.571 0.57096648 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 0 11.3 1.03 2 2 2 1 107.47 107.47 3;4;5 1.4127E-27 33907 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.93 103.03 29.78 41.006 41.269 47.3 54.093 52.148 28 40 40 44 53 50 3 4 4 4 5 3 43083 20100 1688 19355 46494;46495;46496;46497;46498;46499;46500 53829;53830;53831;53832;53833;53834;53835;53836;53837;53838;53839 53830 11 TVLLSLQALLAAAEPDDPQDAVVANQYK Unmodified 2952.5444 0.54441738 1687 P61087;A0A0J9YU07;Q3V3R8;A0A0J9YUR9 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 10.5 0.5 1 1 105.12 105.12 4 3.1806E-36 34699 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 127.38 113.65 60.237 0 16.599 12.127 0 24.518 58 0 16 12 0 23 2 0 1 1 0 1 9884.7 20101 1687 19356 46501;46502 53840;53841 53841 2 TVLPFSQEFQR Unmodified 1350.6932 0.6932003 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 8 0 1 68.997 68.997 2 0.0033054 22827 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.152 43.425 69.618 25.098 0 0 0 29.848 65 28 0 0 0 28 1 1 0 0 0 1 5017.4 20102 2282 19357 46503 53842 53842 1 TVLQIDNSVASALEGINR Unmodified 1899.0062 0.0061545955 2994 Q9CYG7 Tomm34 Mitochondrial import receptor subunit TOM34 yes yes 0 0 0 0 7 0 1 84.552 84.552 3 5.3928E-08 30789 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.511 56.978 29.758 0 47.996 36.51 56.899 0 28 0 46 37 56 0 1 0 1 1 1 0 4121 20103 2994 19358 46504 53843 53843 1 TVLSYLYVNPTNK Unmodified 1510.8031 0.80314468 2721 Q8VI51 Sorcs3 VPS10 domain-containing receptor SorCS3 yes yes 0 0 0 0 12 0 1 76.38 76.38 3 0.00017214 20393 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.438 55.45 49.176 36.052 0 0 46.807 38.106 46 37 0 0 46 37 1 1 0 0 1 1 3117.1 20104 2721 19359 46505 53844 53844 1 TVLWPNGLSLDIPAGR Deamidation (N) 1708.9148 0.91482039 175 A0A0R4J0I9;Q91ZX7;Q3U5J2 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 1 0 0 8 0 1 87.829 87.829 3 0.0042128 31743 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.608 38.632 0 20.216 0 0 19.197 19.706 0 19 0 0 19 19 0 1 0 0 1 1 1958.8 20105 175 19360 46506 53845 53845 65 1 TVMDDFAQFLDTCCK Unmodified 1849.7685 0.76849179 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7 0.816 1 1 1 91.792 91.792 3 7.0365E-06 34713 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.652 61.735 139.82 78.985 57.606 86.943 76.314 20.254 131 84 56 84 75 19 3 3 1 3 2 1 14823 20106 1321 19361 46507;46508;46509 53846;53847;53848 53846 3 TVMIGGK Unmodified 704.3891 0.38909613 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 10 0 1 49.624 49.624 2 0.02534 11574 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.74 47.032 171.99 133.01 196.46 127.63 146.08 235.68 162 139 195 130 153 225 1 1 1 1 1 1 11962 20107 2555 19362 46510 53849 53849 1 TVNALEIELQAQHNLR Unmodified 1847.9854 0.98535957 664;649;663 CON__Q9UE12;CON__Q15323;CON__O76011;CON__Q8IUT8;CON__Q14525 no no 0 0 0 0 8 3.56 1 1 1 63.385 63.385 3 5.4302E-05 22361 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.522 48.271 59.756 62.901 26.198 38.216 35.297 48.029 56 65 28 37 37 46 1 2 1 1 1 1 14105 + 20108 664;649;663 19363 46511;46512;46513 53850;53851;53852 53850 3 TVNDLEDSYGQQWTYEQR Deamidation (N) 2231.9607 0.96072055 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 0 3 0.707 1 2 1 65.819 65.819 3 8.3707E-20 23253 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 133.93 111.29 0 50.008 0 29.56 74.522 18.926 0 47 0 28 74 19 0 2 0 2 3 1 35181 20109 106 19364 46514;46515;46516;46517 53853;53854;53855;53856 53856 44 4 TVNDLEDSYGQQWTYEQR Unmodified 2230.9767 0.97670496 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7 4 1 3 2 1 3 65.613 65.613 2;3;4 2.5716E-45 23789 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 155.43 134.08 189.41 204.35 213.22 193.22 278.2 310.55 178 205 213 186 279 298 6 5 6 4 5 7 416610 20110 106 19364 46518;46519;46520;46521;46522;46523;46524;46525;46526;46527 53857;53858;53859;53860;53861;53862;53863;53864;53865;53866;53867 53867 11 TVNIYFPK Unmodified 980.53312 0.53311783 1466 P27612;F7D1R5 Plaa Phospholipase A-2-activating protein yes no 0 0 0 0 11 0 1 66.554 66.554 3 0.034278 18471 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.283 14.486 0 0 38 0 0 0 0 0 38 0 0 0 0 0 1 0 0 0 3339 20111 1466 19365 46528 53868 53868 1 TVNLDPHDLEK Deamidation (N) 1280.6248 0.62484596 838 E9PWM3 Armcx4 yes yes 0 1 0 0 6 0 1 61.057 61.057 3 0.058719 20585 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.299 13.226 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20112 838 19366 46529 53869 53869 220 1 TVNLFPQYVK Unmodified 1207.6601 0.66010926 1932 Q3TMH2 Scrn3 Secernin-3 yes yes 0 0 0 0 10 0 1 70.856 70.856 3 0.0087059 20906 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.237 24.494 48.697 55.226 64.268 56.197 62.761 77.093 46 56 65 56 65 74 1 1 1 1 1 1 5236.3 20113 1932 19367 46530 53870 53870 1 TVNYIQLK Unmodified 977.55458 0.55458155 3361 Q9Z0P5;A0A1L1STC8;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 10 0 1 60.006 60.006 2 0.0088982 16028 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.64 15.633 44.559 40.838 50.597 42.89 0 84.214 42 42 51 42 0 79 1 1 1 1 0 1 6164.7 20114 3361 19368 46531 53871 53871 1 TVPEELVKPEELSK Unmodified 1596.8611 0.86105349 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 0 0 1 5 0 1 62.992 62.992 3 0.0044925 22085 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.599 32.324 59.756 34.901 26.207 38.032 45.059 38.156 56 37 28 37 46 37 1 1 1 1 1 1 5034.9 20115 2847 19369 46532 53872 53872 1 TVPFCSTFAAFFTR Unmodified 1650.7864 0.78644876 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 0 7.6 5.43 2 1 1 1 90.766 90.766 3 3.3079E-29 25724 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 154.65 129.69 72.621 66.861 87.033 129.92 199.69 97.966 68 66 86 124 196 93 6 6 8 7 6 7 111040 20116 1537 19370 46533;46534;46535;46536;46537 53873;53874;53875;53876;53877;53878;53879;53880;53881;53882;53883;53884;53885 53884 13 TVPIEAVTSK Unmodified 1043.5863 0.58627561 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 8.4 2.42 1 1 2 1 57.547 57.547 2;3 3.744E-07 19695 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 137.98 83.819 403.07 242.8 523.33 267 252.4 262.5 379 260 510 268 250 250 4 4 5 3 3 3 54395 20117 2075 19371 46538;46539;46540;46541;46542 53886;53887;53888;53889;53890 53890 5 TVPLAGHVGFDSLPDQLVNK Unmodified 2106.111 0.11095402 3317 Q9R1T4;A2A3W1 Sept6 Septin-6 yes no 0 0 0 0 7 0 1 73.75 73.75 3 3.626E-11 25709 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.5 85.01 59.736 0 59.209 0 85.217 46.604 56 0 55 0 83 46 1 0 1 0 1 1 14781 20118 3317 19372 46543 53891 53891 1 TVPNDATQTK Unmodified 1073.5353 0.53530267 74;1367;71;949 A0A0A6YY47;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 9.5 3.5 1 1 38.339 38.339 2 7.8313E-09 9978 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 152.07 68.121 0 28.751 62.28 20.54 112.17 0 0 28 60 23 111 0 0 1 1 1 2 0 13787 20119 71;74;949;1367 19373 46544;46545 53892;53893 53892 2 TVPNDATQTK Deamidation (N) 1074.5193 0.51931826 74;1367;71;949 A0A0A6YY47;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 1 0 0 13 0 1 40.222 40.222 3 0.01992 11563 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.359 27.012 0 127.68 0 99.177 131.42 0 0 120 0 93 130 0 0 1 0 1 1 0 6911.5 20120 71;74;949;1367 19373 46546 53894 53894 28 1 TVPPAVPGVTFLSGGQSEEEASLNLNAINR Unmodified 3066.5622 0.56219271 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 7.83 2.41 2 2 1 1 84.202 84.202 3;4 1.5403E-12 30740 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.526 47.51 39.701 88.28 115.18 61.07 128.45 247.88 37 84 112 61 126 236 2 3 4 4 4 8 37295 20121 1308 19374 46547;46548;46549;46550;46551;46552 53895;53896;53897;53898;53899;53900;53901;53902;53903;53904;53905 53900 11 TVPPAVTGVTFLSGGQSEEEASINLNAINK Unmodified 3042.551 0.55095932 1309 P05064;A6ZI44 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 8.47 2.5 3 5 2 1 1 3 90.949 90.949 4;5 4.0624E-34 30830 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.32 97.013 422.57 444.43 477.32 479.77 541.22 559.58 399 436 461 455 547 537 10 15 12 11 13 11 131360 20122 1309 19375 46553;46554;46555;46556;46557;46558;46559;46560;46561;46562;46563;46564;46565;46566;46567 53906;53907;53908;53909;53910;53911;53912;53913;53914;53915;53916;53917;53918;53919;53920;53921;53922;53923;53924;53925;53926;53927;53928;53929;53930 53914 25 TVPPDFYQAK Unmodified 1164.5815 0.58152458 3283 Q9QYS2 Grm3 Metabotropic glutamate receptor 3 yes yes 0 0 0 0 7 0 1 59.229 59.229 3 0.036892 18714 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 41.54 16.686 29.56 55.959 33.954 57.778 74.75 0 28 55 37 56 74 0 1 1 1 1 1 0 2163.7 20123 3283 19376 46568 53931 53931 1 TVPPDVISLSFVR Unmodified 1428.7977 0.79766537 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JFT0 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 8.67 0.471 1 2 78.616 78.616 2 6.6936E-07 26661 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.86 71.131 108.88 163.5 79.252 99.025 234.77 97.562 102 158 75 93 232 94 4 5 2 3 6 2 15726 20124 3210 19377 46569;46570;46571 53932;53933;53934;53935;53936;53937;53938 53936 7 TVPQAPDK Unmodified 854.44978 0.44978213 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 8 3.56 1 1 1 42.207 42.207 2 0.010964 12304 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.358 60.466 138.31 87.548 124.27 138 139.43 106.86 130 93 120 130 139 102 3 3 2 2 2 2 14475 20125 1999 19378 46572;46573;46574 53939;53940;53941 53939 3 TVPQSSLTMGQLYEK Unmodified 1680.8393 0.83927219 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 0 8 0 1 65.626 65.626 3 0.0010073 21272 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.589 32.936 0 0 60.592 0 104.08 75.914 0 0 56 0 102 74 0 0 1 0 1 1 4871 20126 1671 19379 46575 53942 53942 1 TVPTDINFANAVSDALDSLK Unmodified 2090.0532 0.053164368 2380 Q8BGN3;D3YU63;A0A1B0GS66 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 0 0 0 7.5 0.5 1 1 100.16 100.16 3 2.3862E-11 35647 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.4 79.36 7.511 0 0 20.428 6.887 4.0675 7 0 0 20 7 4 1 0 0 2 1 1 2684.6 20127 2380 19380 46576;46577 53943;53944 53944 2 TVPTDINFANAVSDALDSLK Deamidation (N) 2091.0372 0.037179952 2380 Q8BGN3;D3YU63;A0A1B0GS66 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 1 0 0 9 0 1 99.985 99.985 3 6.9895E-08 35732 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.793 57.401 0 6.2889 5.6916 9.4978 0 0 0 6 6 9 0 0 0 1 1 1 0 0 1551.1 20128 2380 19380 46578 53945 53945 922 1 TVPTSSGK Unmodified 775.40758 0.40758296 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 7 1 1 1 36.412 36.412 2;3 0.015571 7404 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.516 25.88 0 59.584 0 61.208 0 0 0 56 0 56 0 0 0 1 0 1 0 0 24161 20129 1999 19381 46579;46580 53946;53947 53947 2 TVQGAFFGVPVYK Unmodified 1411.75 0.7499869 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 10.5 0.5 1 1 76.768 76.768 2;3 0.0018315 23004 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.482 31.265 0 59.584 0 0 0 99.138 0 56 0 0 0 93 0 1 0 0 0 1 7464.3 20130 2141 19382 46581;46582 53948;53949 53949 2 TVQIEASTVEIEER Unmodified 1602.8101 0.81008055 899 E9Q3V6;P42208;F6WYM0;D3YYB1;D3Z3C0;F6UKN5;D3YZU7;D3Z1S1 Sept2 Septin-2 yes no 0 0 0 0 3 0 1 59.349 59.349 3 0.00045415 20936 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.568 45.905 0 20.216 0 0 18.867 29.31 0 19 0 0 19 28 0 1 0 0 1 1 4018.9 20131 899 19383 46583 53950 53950 1 TVQLYGPTNFAPVVTHVAR Unmodified 2069.1058 0.10580906 2573 Q8JZW4 Cpne5 Copine-5 yes yes 0 0 0 0 9 0 1 66.707 66.707 3 1.3313E-05 21117 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.869 39.678 29.856 37.355 0 0 0 59.696 28 37 0 0 0 56 1 1 0 0 0 1 4486 20132 2573 19384 46584 53951 53951 1 TVQQHAGETDPVTTMR Unmodified 1769.8366 0.83664643 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 4 0 1 38.363 38.363 3 8.4787E-06 10744 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.911 56.587 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 4670.7 20133 158 19385 46585 53952 53952 1 TVQTAAANAASTAATSAAQNAFK Unmodified 2165.0713 0.071274048 2575 Q8K021;Q3TSA8 Scamp1 Secretory carrier-associated membrane protein 1 yes no 0 0 0 0 7.67 0.943 2 1 67.756 67.756 3;4 5.2389E-25 21455 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.912 70.661 119.41 42.712 93.251 94.516 83.777 0 112 46 93 93 83 0 2 1 2 2 1 0 10557 20134 2575 19386 46586;46587;46588 53953;53954;53955 53955 3 TVQTDHNAVQR Unmodified 1267.6269 0.62691165 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 7.33 4.03 1 1 1 25.239 25.239 3 2.5881E-14 4769 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 152.64 118.88 0 8.9157 39.499 30.604 0 20.254 0 9 37 28 0 19 0 1 1 1 0 1 3773.3 20135 1436 19387 46589;46590;46591 53956;53957;53958 53956 3 TVQVEQSK Unmodified 917.48181 0.48181054 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 0 6 0.816 1 1 1 39.417 39.417 2 0.0033763 9575 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 123.5 42.183 148.11 40.083 196.85 246.71 264.05 144.09 139 42 195 241 268 139 2 1 3 3 3 2 59701 20136 879 19388 46592;46593;46594 53959;53960;53961 53961 3 TVSAMQHVLQR Unmodified 1268.6659 0.66593969 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 8.5 0.5 1 1 46.625 46.625 3 8.4559E-10 12457 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.46 81.701 59.622 24.815 57.215 35.643 73.789 57.59 56 28 56 37 74 56 1 1 1 1 1 1 20943 20137 2587 19389 46595;46596 53962;53963 53962 2 TVSAVLQFGNIVLK Unmodified 1487.8712 0.87116466 1149 Q6URW6;K3W4R2;A0A140LI60 Myh14 Myosin-14 yes no 0 0 0 0 11 0 1 87.713 87.713 3 0.00032353 27993 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.034 34.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1165 20138 1149 19390 46597 53964 53964 1 TVSGSEEPLPDTYRPPEELER Unmodified 2400.1445 0.14449857 2281 Q7M750 Opalin Opalin yes yes 0 0 0 1 3 0.816 1 1 1 56.171 56.171 3 2.2262E-08 19093 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.122 52.248 20.387 19.907 78.275 37.736 67.16 39.442 19 19 75 38 65 37 1 1 3 2 2 2 23484 20139 2281 19391 46598;46599;46600 53965;53966;53967;53968;53969 53966 5 TVSGVNGPLVILDHVK Deamidation (N) 1647.9196 0.91957142 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 1 0 0 8.11 1.91 1 3 3 1 1 74.968 74.968 2;3;4 6.8882E-24 25980 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 135.15 96.786 680.35 693.36 925.58 747.97 1219.1 578.69 641 704 922 739 1221 557 9 9 10 9 13 6 171450 20140 1741 19392 46601;46602;46603;46604;46605;46606;46607;46608;46609 53970;53971;53972;53973;53974;53975;53976;53977;53978;53979;53980;53981;53982;53983 53974 679 14 TVSGVNGPLVILDHVK Unmodified 1646.9356 0.93555583 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 9 2.1 1 2 1 1 71.188 71.188 3;4 2.2976E-106 23944 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 233.48 191.4 415 290.34 622.32 544.61 372.22 251.64 390 287 612 529 372 241 6 4 8 7 4 4 76574 20141 1741 19392 46610;46611;46612;46613;46614 53984;53985;53986;53987;53988;53989;53990;53991;53992 53986 9 TVSLGAGAK Unmodified 802.45487 0.45486751 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 9 0 1 46.297 46.297 2 0.022327 11483 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.969 22.701 0 24.472 0 60.376 44.214 32.85 0 23 0 56 46 32 0 1 0 1 1 1 6309.9 20142 2056 19393 46615 53993 53993 1 TVSLNNLSADEVTR Deamidation (N) 1518.7526 0.75256567 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 1 0 0 4 0 1 60.084 60.084 2 4.6594E-16 21076 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 113.52 68.5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20143 2914 19394 46616 53994 53994 1021 1 TVSLNNLSADEVTR Unmodified 1517.7686 0.76855009 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 58.837 58.837 2;3 1.3996E-31 20379 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 169.46 126.75 206.84 112.67 164.31 149.72 93.929 215.85 194 121 158 139 93 205 3 3 3 2 2 3 37315 20144 2914 19394 46617;46618;46619;46620 53995;53996;53997;53998 53998 4 TVSPALIAR Unmodified 926.55492 0.5549159 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 51.026 51.026 2 0.0010268 13503 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.064 49.489 137.98 96.344 172.31 140.05 85.615 0 130 102 171 139 88 0 1 1 1 1 1 0 33028 20145 2264 19395 46621;46622 53999;54000 54000 2 TVSPDRLELEAAQK Unmodified 1555.8206 0.82058566 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 1 13 0 1 53.387 53.387 3 0.00015731 17983 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.45 66.622 167.09 121.91 307.79 0 169.31 247.81 158 130 292 0 170 237 1 1 1 0 1 1 12818 20146 1798 19396 46623 54001 54001 1 TVSSASR Unmodified 706.36097 0.36096712 935 E9Q8N8;O88343 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 5 0 1 21.087 21.087 2 0.027665 3058 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.033 33.731 0 38.758 36.497 27.198 65.45 37.574 0 37 37 28 65 37 0 1 1 1 1 1 3259.1 20147 935 19397 46624 54002 54002 1 TVSSEDVAEMHNILK Unmodified 1671.8138 0.81378572 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 0 0 0 5 0 1 61.58 61.58 3 0.00034575 21496 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.472 20.215 39.181 35.773 57.036 27.205 0 39.442 37 37 56 28 0 37 1 1 1 1 0 1 4788 20148 2334 19398 46625 54003 54003 1 TVSSEDVAEMHNILK Deamidation (N) 1672.7978 0.7978013 2334 Q80XI4 Pip4k2b Phosphatidylinositol 5-phosphate 4-kinase type-2 beta yes yes 0 1 0 0 6 0 1 61.138 61.138 3 0.013392 20785 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.408 25.745 39.701 0 0 49.219 56.315 0 37 0 0 46 56 0 1 0 0 1 1 0 14959 20149 2334 19398 46626 54004 54004 916 1 TVSSSNGGESSSR Deamidation (N) 1254.5324 0.53240214 1047 Q3TM89;F8WI88;Q6P8I4 Pcnp PEST proteolytic signal-containing nuclear protein yes no 0 1 0 0 2 0 1 24.253 24.253 2 0.0085733 4608 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 88.681 45.434 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 984.36 20150 1047 19399 46627 54005 54005 276 1 TVSWAVTPK Unmodified 987.53893 0.53893149 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 10 0 1 59.275 59.275 2 0.0062842 15723 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.755 34.597 0 0 40.034 0 66.701 37.539 0 0 37 0 65 37 0 0 1 0 1 1 3093.5 20151 2141 19400 46628 54006 54006 1 TVSWFSPNEK Unmodified 1193.5717 0.57168818 398 A0A2R8VK70;A0A2R8VI30;Q61735;A0A2R8VJU9 Cd47 Leukocyte surface antigen CD47 yes no 0 0 0 0 8.5 0.5 1 1 64.395 64.395 3 0.0011806 20641 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.885 48.668 39.701 39.368 0 90.719 0 108.73 37 37 0 83 0 102 1 1 0 2 0 1 5067.2 20152 398 19401 46629;46630 54007;54008 54007 2 TVTAMDVVYALK Oxidation (M) 1325.6901 0.69008876 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 1 0 8 0 1 73.417 73.417 3 0.012797 24877 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.013 30.156 0 19.403 48.608 0 0 0 0 19 46 0 0 0 0 1 1 0 0 0 1987.3 20153 1739 19402 46631 54009 54009 131 1 TVTAMDVVYALK Unmodified 1309.6952 0.69517413 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 82.626 82.626 3 3.0022E-08 29240 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.7 79.356 242.85 163.98 291.73 306.82 286.98 279.62 231 167 288 295 296 269 3 2 4 5 6 5 144470 20154 1739 19402 46632;46633;46634;46635;46636 54010;54011;54012;54013;54014;54015;54016;54017;54018 54010 9 TVTAMDVVYALKR Unmodified 1465.7963 0.79628516 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 1 11.5 0.5 1 1 74.358 74.358 3 2.5741E-27 19503 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 172.92 137.67 284.49 124.87 229.84 226.6 183.1 120 267 139 230 223 185 120 1 1 1 1 1 1 78086 20155 1739 19403 46637;46638 54019;54020 54020 2 TVTDGGAAQR Unmodified 974.47812 0.47812214 1119 H3BKQ7;H3BJD0;H3BL28;Q7TN74;H3BJD6;Q3UXW4;H3BJA6 Ppp1r9a yes no 0 0 0 0 6.25 3.96 1 1 1 1 26.887 26.887 2 0.00011613 5447 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.19 58.232 39.701 68.699 18.503 59.764 45.793 72.247 37 66 19 56 47 69 1 3 1 2 2 2 9829.6 20156 1119 19404 46639;46640;46641;46642 54021;54022;54023;54024 54022 4 TVTEGGAAHR Unmodified 997.49411 0.49410656 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6.25 3.96 1 1 1 1 21.584 21.584 2;3 2.4755E-06 3184 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.41 95.692 9.657 52.969 13.826 32.587 44.669 9.0357 9 50 15 31 44 9 1 2 1 2 2 1 4402.8 20157 2255 19405 46643;46644;46645;46646 54025;54026;54027;54028 54027 4 TVTISKPCGK Unmodified 1089.5852 0.58522975 1771 Q3UZI5;P63089 Ptn Pleiotrophin yes no 0 0 0 1 9.5 0.5 1 1 46.088 46.088 3 0.0081848 11328 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.78 22.155 60.088 67.931 73.521 134.49 170.95 202.99 56 65 74 130 176 195 1 1 1 2 2 2 10496 20158 1771 19406 46647;46648 54029;54030 54029 2 TVTIWEIINSEYFTAEQR Unmodified 2199.0848 0.084798847 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 9 0 1 96.592 96.592 3 0.00011311 34562 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.368 37.489 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 2260.3 20159 3266 19407 46649 54031 54031 1 TVTLWTYSG Unmodified 1026.5022 0.50221163 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 9 0 1 77.938 77.938 2 0.016351 26346 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.312 36.091 0 29.792 0 0 0 49.036 0 28 0 0 0 46 0 1 0 0 0 1 5709.9 20160 2537 19408 46650 54032 54032 1 TVTNAVVTVPAYFNDSQR Deamidation (N) 1981.9745 0.97452012 1762 P63017 Hspa8 Heat shock cognate 71 kDa protein yes yes 0 1 0 0 7.62 3.16 2 3 1 2 70.976 70.976 3 7.026E-13 25489 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.65 99.639 286.2 314.71 292.7 307.26 330.29 360.49 269 316 287 288 334 343 5 7 5 6 7 7 122590 20161 1762 19409 46651;46652;46653;46654;46655;46656;46657;46658 54033;54034;54035;54036;54037;54038;54039;54040;54041;54042 54038 694;695 10 TVTNAVVTVPAYFNDSQR 2 Deamidation (N) 1982.9585 0.9585357 1762 P63017 Hspa8 Heat shock cognate 71 kDa protein yes yes 0 2 0 0 5 0 1 72.779 72.779 3 0.0042242 26652 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.529 37.454 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20162 1762 19409 46659 54043 54043 694;695 1 TVTNAVVTVPAYFNDSQR Unmodified 1980.9905 0.99050453 1762 P63017 Hspa8 Heat shock cognate 71 kDa protein yes yes 0 0 0 0 8.38 2 1 2 2 2 1 68.927 68.927 2;3;4 2.7839E-53 23623 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 165.16 134.98 186.79 268.78 422.39 226.82 281.15 426.91 176 270 408 223 289 408 4 7 6 5 6 8 318670 20163 1762 19409 46660;46661;46662;46663;46664;46665;46666;46667 54044;54045;54046;54047;54048;54049;54050;54051;54052 54046 9 TVTNNLK Unmodified 788.43922 0.43921744 905;1106;1107;1656 E9Q452;E9Q454;G5E8R0;E9Q455;G5E8R1;Q8BSH3;P58771 Tpm1 Tropomyosin alpha-1 chain no no 0 0 0 0 8 0.816 1 1 1 41.41 41.41 2 0.0056661 9816 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 137.18 57.726 322.75 450.75 467.77 441.7 370.29 292.38 305 450 477 436 383 278 2 2 3 3 3 1 47291 20164 905;1106;1107;1656 19410 46668;46669;46670 54053;54054;54055 54054 3 TVTPASSAK Unmodified 860.46035 0.46034682 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 8.9 2.47 1 1 1 2 1 1 1 1 1 36.377 36.377 2;3 4.0926E-07 6477 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.92 51.258 1226.7 793.73 1161.2 1289.5 1159.2 1249.7 1151 803 1151 1244 1165 1189 6 8 8 7 7 8 503680 20165 1158 19411 46671;46672;46673;46674;46675;46676;46677;46678;46679;46680 54056;54057;54058;54059;54060;54061;54062;54063;54064;54065;54066;54067;54068 54065 13 TVTQHSNGAR Deamidation (N) 1070.5105 0.51048491 818 E9Q5N7;E9PUN0;E9PUM9;E9Q7X7 Nrxn2 yes no 0 1 0 0 4 0 1 18.92 18.92 3 0.0046476 2666 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.028 48.728 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 366.06 20166 818 19412 46681 54069 54069 215 1 TVTVNDCEAK Deamidation (N) 1136.502 0.50195363 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 1 0 0 4 0 1 44.306 44.306 2 0.00083606 13564 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 110.39 78.965 0 39.064 18.214 0 0 0 0 37 19 0 0 0 0 1 1 0 0 0 2718 20167 1497 19413 46682 54070 54070 559 1 TVTVNDCEAK Unmodified 1135.5179 0.51793805 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 0 4.67 0.471 1 2 42.535 42.535 2;3 6.8707E-09 12344 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.54 92.52 148.12 87.306 99.238 115.41 0 49.036 139 93 102 111 0 46 2 2 2 2 0 1 13630 20168 1497 19413 46683;46684;46685 54071;54072;54073 54072 3 TVTYEDPQAVGGLASALDNR Unmodified 2076.0124 0.012362185 2058 Q5SRX1;Q5SXA5;Q5SXA4;F6RBX1;F6ZDJ1 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 8.5 4.5 1 1 70.385 70.385 3 3.8219E-07 26010 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.448 48.036 9.657 0 0 19.336 17.978 29.335 9 0 0 18 19 28 1 0 0 1 1 1 5853.3 20169 2058 19414 46686;46687 54074;54075 54075 2 TVVHLLSGK Unmodified 952.57057 0.57056597 983 H3BK88;F6R3V4;H3BIX0;H3BL37;O08784 Tcof1 Treacle protein yes no 0 0 0 0 11 0 1 53.859 53.859 3 0.032117 13141 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 44.309 32.819 69.303 0 74.309 0 67.99 0 65 0 69 0 65 0 1 0 1 0 1 0 3710 20170 983 19415 46688 54076 54076 1 TVVIGEQEQR Unmodified 1157.6041 0.60405094 2035 Q52KR3;A0A286YDW6 Prune2 Protein prune homolog 2 yes no 0 0 0 0 4 0 1 42.483 42.483 2 0.011086 12711 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.734 27.549 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20171 2035 19416 46689 54077 54077 1 TVVNISSLCALQPYK Unmodified 1691.8916 0.89164211 2766 Q91XH5;Q64105 Spr Sepiapterin reductase yes no 0 0 0 0 10 0 1 76.716 76.716 2 1.2602E-06 23471 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.17 76.553 20.387 0 0 0 18.867 29.31 19 0 0 0 19 28 1 0 0 0 1 1 3070.6 20172 2766 19417 46690 54078 54078 1 TVVNTITGSTNVGDQLPTGQLSVVPWR Unmodified 2838.4876 0.4875712 2650 Q8R2R9 Ap3m2 AP-3 complex subunit mu-2 yes yes 0 0 0 0 8.5 0.5 1 1 83.939 83.939 3;4 4.3303E-06 29946 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.14 27.142 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 3687.1 20173 2650 19418 46691;46692 54079;54080 54079 2 TVVPVAK Unmodified 712.44833 0.44832557 1223 O54983 Crym Ketimine reductase mu-crystallin yes yes 0 0 0 0 9.6 1.85 2 1 1 1 48.445 48.445 2;3 0.017391 13164 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.61 28.349 1142.4 1174.9 1613.1 936.25 665.54 1378 1077 1202 1596 956 682 1308 4 6 5 5 3 4 382770 20174 1223 19419 46693;46694;46695;46696;46697 54081;54082;54083;54084;54085;54086 54081 6 TVVSGLVQFVPK Unmodified 1272.7442 0.74417324 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 11.2 1.09 1 2 1 77.424 77.424 2;3 1.5775E-07 23332 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.47 66.594 49.953 97.293 48.34 170.64 146.93 176.22 47 93 47 158 148 168 2 2 2 3 3 4 37262 20175 432 19420 46698;46699;46700;46701 54087;54088;54089;54090;54091 54090 5 TVVTEAGNLLK Unmodified 1143.6499 0.6499385 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 7.25 0.829 1 1 2 65.531 65.531 2;3 2.812E-08 21248 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 128.81 64.099 117.93 177.23 124.73 143.11 73.302 224.97 111 176 129 139 74 213 3 4 3 4 1 4 40675 20176 859 19421 46702;46703;46704;46705 54092;54093;54094;54095 54094 4 TVVTGIEMFHK Unmodified 1260.6536 0.65364367 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 10 2.16 1 1 1 63.424 63.424 3 1.5936E-09 22560 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 112.13 80.117 108.73 0 119.55 0 74.072 97.024 102 0 111 0 74 93 1 0 1 0 1 1 30840 20177 2361 19422 46706;46707;46708 54096;54097;54098 54098 3 TVVTSVFGVK Unmodified 1035.5964 0.59644637 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 11 0 1 68.354 68.354 2 5.9979E-05 19327 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.57 61.488 89.059 0 0 71.045 0 0 83 0 0 65 0 0 1 0 0 1 0 0 8022.2 20178 2459 19423 46709 54099 54099 1 TVVVTTILESPYVMMK Unmodified 1809.962 0.96202986 1104 G5E8H1 Gria2 no no 0 0 0 0 12 0 1 91.582 91.582 3 8.0682E-07 26093 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.42 49.559 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20179 1104 19424 46710 54100 54100 1 TVWQYHFR Unmodified 1135.5563 0.55631289 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 10 0 1 52.192 52.192 3 0.0030658 12547 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.265 48.441 157.99 0 136.72 70.501 118.66 105.35 148 0 130 74 120 102 1 0 1 1 1 1 8317 20180 1512 19425 46711 54101 54101 1 TVYETLDIGWQLLR Unmodified 1705.9039 0.90392136 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 9.62 1.58 2 3 1 1 1 94.431 94.431 2;3 1.1244E-35 34125 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 174.72 150.96 128.74 134.74 91.851 87.868 44.959 152.22 123 133 91 84 47 144 4 6 4 4 2 5 70308 20181 1741 19426 46712;46713;46714;46715;46716;46717;46718;46719 54102;54103;54104;54105;54106;54107;54108;54109;54110;54111;54112 54102 11 TVYFAEK Unmodified 856.43307 0.43306943 3153 Q9DCT8 Crip2 Cysteine-rich protein 2 yes yes 0 0 0 0 7.5 0.5 1 1 55.11 55.11 2;3 0.0094299 16939 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.058 28.554 248.66 229.76 273.63 296.51 337.07 296.32 234 236 279 292 345 287 1 2 2 2 2 2 21328 20182 3153 19427 46720;46721 54113;54114 54113 2 TVYGGGCSEMLMAHAVTQLANR Unmodified 2365.0977 0.097705269 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 8 0 1 69.149 69.149 3 0.0054205 22954 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.025 20.532 0 0 20.558 0 27.961 38.644 0 0 19 0 28 37 0 0 1 0 1 1 3020 20183 1823 19428 46722 54115 54115 1 TVYGNHTR Unmodified 946.46208 0.46207815 507 A2AQN5;A2AQN4;Q9QXG4 Acss2 Acetyl-coenzyme A synthetase, cytoplasmic yes no 0 0 0 0 7 0 1 22.366 22.366 3 0.017045 3249 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.432 29.469 14.952 13.888 0 0 0 9.594 14 14 0 0 0 9 1 1 0 0 0 1 580.88 20184 507 19429 46723 54116 54116 1 TVYSILR Unmodified 850.49125 0.49125301 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 9 0 1 57.258 57.258 2 0.051549 16579 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.134 23.903 99.258 0 89.306 0 93.636 106.06 93 0 83 0 93 102 1 0 1 0 1 1 11117 20185 2269 19430 46724 54117 54117 1 TVYSVFGFSFK Unmodified 1280.6441 0.64412484 3032 Q9D0R2 Tars Threonine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 12 0 1 86.406 86.406 2 0.0013881 24246 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.898 54.578 20.387 0 0 28 0 20.254 19 0 0 28 0 19 1 0 0 1 0 1 1289.7 20186 3032 19431 46725 54118;54119 54119 2 TVYVLPVGDADAAVVATTSYR Unmodified 2167.1161 0.11609898 1901 Q14BB9 Map6d1 MAP6 domain-containing protein 1 yes yes 0 0 0 0 7 0 1 79.064 79.064 3 0.048891 28166 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 28.65 11.161 20.387 0 0 19.317 18.987 0 19 0 0 18 19 0 1 0 0 1 1 0 4331.8 20187 1901 19432 46726 54120 54120 1 TWGLQATNAVSPLK Unmodified 1484.7987 0.798728 2647 Q8R1S0 Coq6 Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial yes yes 0 0 0 0 9 0 1 69.537 69.537 3 0.00048284 22421 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.246 37.27 59.628 0 77.246 56.604 0 0 56 0 74 56 0 0 1 0 1 1 0 0 2853.2 20188 2647 19433 46727 54121 54121 1 TWITNSPVADLFIVWAR Unmodified 1988.052 0.051982576 36 A0A0A0MQ68;Q60759 Gcdh Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 12 0 1 107.01 107.01 3 3.9323E-06 29489 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.758 67.816 0 5.2167 6.179 0 0 3.198 0 5 6 0 0 3 0 1 1 0 0 1 1417.7 20189 36 19434 46728 54122 54122 1 TWNDPSVQQDIK Unmodified 1429.6838 0.68375782 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 9.5 3.5 1 1 57.41 57.41 2;3 0.00022048 19008 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.338 44.028 148.8 68.702 0 99 198.45 28.204 139 74 0 93 195 28 1 1 0 1 2 1 12622 20190 1419 19435 46729;46730 54123;54124 54123 2 TWPLILDTDDLPK Unmodified 1525.8028 0.80281033 614 B2RQ71;E9PWR4;B7ZMZ7;A0A1Y7VMZ0 Dip2c yes no 0 0 0 0 8 0 1 87.659 87.659 3 0.026246 31745 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.066 19.403 0 29.478 18.789 0 0 9.594 0 28 19 0 0 9 0 1 1 0 0 1 1152.1 20191 614 19436 46731 54125 54125 1 TWTLCGTPEYLAPEIILSK Unmodified 2191.1235 0.12349254 1310;1793 P05132;P68181 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 9.2 2.04 1 1 2 1 92.653 92.653 3;4 1.061E-07 32940 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.808 59.373 20.126 75.771 87.105 49.346 18.172 68.771 19 75 84 47 19 65 1 4 2 2 1 3 25227 20192 1310;1793 19437 46732;46733;46734;46735;46736 54126;54127;54128;54129;54130 54129 5 TWVLTPK Unmodified 843.48544 0.48543935 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 0 0 0 11 0 1 63.152 63.152 2 0.028001 17000 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.95 48.844 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20193 1435 19438 46737 54131 54131 1 TWWNQFSVTALQLLQANR Unmodified 2175.1225 0.12252176 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 13 0 1 102.37 102.37 3 1.746E-06 41451 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.942 54.543 9.5583 19.571 0 0 0 29.848 9 19 0 0 0 28 1 1 0 0 0 1 2916.3 20194 2162 19439 46738 54132 54132 1 TYADYESVNECMEGVCK Unmodified 2053.8067 0.80672779 326 A0A1W2P7H9;A0A1W2P7T3;P84089;G3UW85 Erh Enhancer of rudimentary homolog yes no 0 0 0 0 4 0 1 63.245 63.245 3 2.1188E-13 22405 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.211 82.553 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20195 326 19440 46739 54133 54133 1 TYAEILEPFHPVR Unmodified 1570.8144 0.81437807 2910 Q9CQ54 Ndufc2 NADH dehydrogenase [ubiquinone] 1 subunit C2 yes yes 0 0 0 0 7 1 1 1 67.274 67.274 3 0.00069031 23527 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.827 44.397 49.074 56.275 0 60.393 43.334 58.459 46 56 0 56 46 56 1 1 0 1 1 1 7797.4 20196 2910 19441 46740;46741 54134;54135 54134 2 TYAEPLTAAMVEFYTMSQER Unmodified 2337.0657 0.065719664 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8 0 1 97.36 97.36 3 5.546E-09 35008 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.747 60.908 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20197 3204 19442 46742 54136 54136 1 TYAEVDR Unmodified 852.39775 0.39774656 505 A2AQ43;A2AQ44;A2AQ42;A2AQ45;A2AQ41;Q80TY0 Fnbp1 Formin-binding protein 1 yes no 0 0 0 0 3 0 1 34.88 34.88 2 0.064148 9642 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 72.789 26.774 0 69.16 0 0 46.111 58.38 0 65 0 0 46 56 0 1 0 0 1 1 4584 20198 505 19443 46743 54137 54137 1 TYAPVAFR Unmodified 923.4865 0.48650199 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma no no 0 0 0 0 8.5 0.5 1 1 52.487 52.487 2 0.0084655 15017 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.77 58.052 139.09 204.97 98.536 95.776 152.58 64.936 130 203 102 93 148 65 1 2 1 1 1 1 32465 20199 1044 19444 46744;46745 54138;54139 54138 2 TYATAEPFIDAK Unmodified 1325.6503 0.65033243 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8 2.83 1 1 1 1 1 63.945 63.945 2;3 1.7695E-26 22796 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 172.61 129.32 320.44 144.54 349.99 476.48 463.59 544.29 300 144 343 463 482 523 5 3 5 7 7 7 308100 20200 1282 19445 46746;46747;46748;46749;46750 54140;54141;54142;54143;54144;54145;54146;54147 54146 8 TYCYDLR Unmodified 989.42767 0.42766648 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 6 0 1 47.133 47.133 2 0.036239 13987 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.297 47.293 0 58.227 81.176 115.31 62.693 0 0 56 83 111 65 0 0 1 1 1 1 0 6423.4 20201 2278 19446 46751 54148 54148 1 TYDETYTR Unmodified 1047.4509 0.45090434 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 0 3 0 1 37.026 37.026 2 0.043526 10660 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.27 48.885 0 58 94.74 54.012 82.367 57.346 0 56 93 56 83 56 0 1 1 1 1 1 4171.8 20202 3131 19447 46752 54149 54149 1 TYDLVAAASK Unmodified 1037.5393 0.53932542 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 7 0 1 59.259 59.259 3 0.014957 18924 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.5 22.986 99.789 0 0 29.558 55.589 47.45 93 0 0 28 56 46 1 0 0 1 1 1 2588 20203 1221 19448 46753 54150 54150 1 TYDLYITYDK Unmodified 1293.6129 0.61288429 2902 Q9CPX6 Atg3 Ubiquitin-like-conjugating enzyme ATG3 yes yes 0 0 0 0 6 0 1 68.166 68.166 2 0.05509 23891 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.445 13.889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20204 2902 19449 46754 54151 54151 1 TYEEGLK Unmodified 838.40725 0.40724861 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 0 9 4 1 1 45.948 45.948 2 0.02695 14009 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.298 10.182 0 116.77 79.527 73.471 142.02 0 0 111 83 74 139 0 0 1 1 1 1 0 6704.1 20205 2092 19450 46755;46756 54152;54153 54152 2 TYEEGLKHEANNLQLK Unmodified 1885.9534 0.95339074 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 1 6 0 1 56.59 56.59 4 1.3038E-05 18407 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.968 53.747 108.31 99.433 107.2 143.39 113.96 144.92 102 102 111 139 120 139 1 1 1 1 1 1 8836.4 20206 2092 19451 46757 54154 54154 1 TYEQVLENLQSK Unmodified 1450.7304 0.73037367 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 7 0.816 1 1 1 72.05 72.05 3 0.00017745 24272 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.466 51.261 0 29.18 36.627 66.932 102.64 28.542 0 28 37 65 102 28 0 1 1 2 2 1 12717 20207 1608 19452 46758;46759;46760 54155;54156;54157 54157 3 TYETTLEK Unmodified 983.48114 0.48114184 655 CON__P02768-1 yes yes 0 0 0 0 5 0 1 49.023 49.023 2 0.014003 15526 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.205 57.118 69.114 33.408 77.715 0 0 39.442 65 37 74 0 0 37 1 1 1 0 0 1 2084.5 + 20208 655 19453 46761 54158 54158 1 TYEVTNR Unmodified 881.4243 0.42429566 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 4 0 1 33.786 33.786 2 0.034637 8587 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.116 32.69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20209 1039 19454 46762 54159 54159 1 TYFLKPSK Unmodified 982.54877 0.54876789 2923 Q9CQE1;B1AWZ5 Nipsnap3b Protein NipSnap homolog 3B yes no 0 0 0 1 6.5 5.5 1 1 54.476 54.476 3 0.031532 17101 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.216 40.53 401.82 374.96 135.44 362.83 270.36 304.62 377 380 139 344 279 293 2 2 1 2 1 1 55605 20210 2923 19455 46763;46764 54160;54161 54160 2 TYFPHFDVSHGSAQVK Unmodified 1818.8689 0.86893283 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 7.83 3.44 1 1 1 1 1 1 56.227 56.227 3;4 6.7339E-59 17663 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 194.55 159.2 2314.9 2719.4 2574.7 2575.1 3989 2608.4 2183 2748 2625 2565 4004 2543 6 8 6 8 6 6 463110 20211 2735 19456 46765;46766;46767;46768;46769;46770 54162;54163;54164;54165;54166;54167;54168;54169;54170 54164 9 TYFQGSLPAR Unmodified 1138.5771 0.57710791 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 10 2.16 1 1 1 52.852 52.852 2 5.3025E-07 14516 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.55 95.281 275.69 139.75 318.73 276.74 199.31 300.25 259 143 315 274 204 287 3 2 4 4 2 4 46371 20212 1611 19457 46771;46772;46773 54171;54172;54173;54174 54173 4 TYFTDKK Unmodified 901.45453 0.45453316 1523 P35564 Canx Calnexin yes yes 0 0 0 1 9 0 1 46.454 46.454 3 0.040203 11498 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.382 13.998 300.22 154.05 266.45 310.87 293.34 301.84 282 168 269 304 304 291 1 1 1 1 1 1 12859 20213 1523 19458 46774 54175 54175 1 TYGGYQGR Unmodified 900.40898 0.40897995 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 10 3 1 1 32.447 32.447 2 0.01221 7704 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.308 53.752 0 116.39 102.46 114.05 61.96 77.116 0 111 102 111 65 74 0 2 1 2 1 1 11254 20214 3258 19459 46775;46776 54176;54177 54177 2 TYGICGAIR Unmodified 1009.5015 0.50150012 2938 Q9CQR2 Rps21 40S ribosomal protein S21 yes yes 0 0 0 0 10 3 1 1 49.111 49.111 2 0.01457 14193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.905 43.733 177.84 183.65 71.972 184.35 198.34 191.55 167 185 74 176 204 185 2 2 1 2 2 2 20178 20215 2938 19460 46777;46778 54178;54179 54178 2 TYGQSTYSR Unmodified 1061.4778 0.47778779 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 9.5 3.5 1 1 32.551 32.551 2 0.0031437 7177 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.867 17.892 9.657 29.792 0 91.812 0 0 9 28 0 84 0 0 1 1 0 2 0 0 4516.7 20216 1555 19461 46779;46780 54180;54181 54180 2 TYGVSFFLVK Unmodified 1159.6277 0.6277465 287;1450 E9PUM4;A0A1L1SQ51;Q71LX4;P26039 Tln2;Tln1 Talin-2;Talin-1 no no 0 0 0 0 11.5 0.5 1 1 81.281 81.281 3 0.00043367 22277 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 86.898 52.011 78.628 62.571 76.999 0 0 29.848 74 65 75 0 0 28 2 2 2 0 0 1 11276 20217 287;1450 19462 46781;46782 54182;54183 54183 2 TYIELLPPAEK Unmodified 1272.6966 0.69655434 353 A0A286YCQ0;A0A286YDN0;E9Q6A3;E9PYX6;E9QNA7;D3Z5J3;A0A286YCI8;Q62417 Sorbs1 Sorbin and SH3 domain-containing protein 1 yes no 0 0 0 0 7 0 1 71.99 71.99 3 0.017208 24793 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.915 23.037 49.358 0 0 39.772 35.555 38.427 46 0 0 37 37 37 1 0 0 1 1 1 3201.3 20218 353 19463 46783 54184 54184 1 TYIIGELHPDDR Unmodified 1427.7045 0.70449327 1097 G5E850;P56395;E0CY88 Cyb5a Cytochrome b5 yes no 0 0 0 0 13 0 1 55.132 55.132 3 0.010278 18748 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.47 31.246 127.43 97.582 140.77 70.369 112.87 0 120 102 139 74 111 0 1 1 1 1 1 0 9108.6 20219 1097 19464 46784 54185 54185 1 TYINPFVSFIDQR Unmodified 1598.8093 0.80929269 2350 Q80ZX0;F6VJC5 Sec24b yes no 0 0 0 0 10 0 1 86.224 86.224 2 0.0088788 27711 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.019 33.033 0 20.073 8.5336 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 1452.1 20220 2350 19465 46785 54186 54186 1 TYIPPKGETK Unmodified 1132.6128 0.61282471 116 A0A0J9YUD8;A0A0J9YUZ4;P63158;D3YZ18;D3YVC6 Hmgb1 High mobility group protein B1 yes no 0 0 0 1 8.5 0.5 1 1 44.316 44.316 3 0.0020255 10539 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.261 55.588 176.84 131.23 283.64 188.38 126.77 187.62 167 139 278 190 125 176 2 2 2 2 1 1 16677 20221 116 19466 46786;46787 54187;54188 54188 2 TYIQCIAAISR Unmodified 1294.6704 0.67035637 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 64.936 64.936 2;3 3.9702E-08 18136 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.48 83.174 118.83 63.026 95.15 129.65 69.355 39.442 111 60 97 125 69 37 2 1 2 2 1 1 35129 20222 2264 19467 46788;46789;46790;46791 54189;54190;54191;54192 54190 4 TYITTALGGICGIIGSAYSVSLNPADSTLEAVAR Unmodified 3440.7497 0.74973548 1095 G5E814 Ndufa11 yes yes 0 0 0 0 12 0 1 105.38 105.38 4 2.2549E-05 29262 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.339 35.906 0 0 3.246 0 6.276 0 0 0 3 0 6 0 0 0 1 0 1 0 2045.7 20223 1095 19468 46792 54193 54193 1 TYLASVK Unmodified 780.43815 0.43815481 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 10.5 1.8 1 1 1 1 51.614 51.614 2;3 0.011663 14797 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.01 37.969 414.82 241.84 408.62 0 159.88 187.32 390 260 393 0 159 180 3 3 3 0 1 1 62344 20224 1157;2210 19469 46793;46794;46795;46796 54194;54195;54196;54197 54194 4 TYLEEELTK Unmodified 1124.5601 0.56012044 2629 Q8R071;B2RXC2 Itpka;Itpkb Inositol-trisphosphate 3-kinase A yes no 0 0 0 0 5 1 1 1 63.334 63.334 2;3 3.4768E-05 22433 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 136.57 98.755 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 4790.6 20225 2629 19470 46797;46798 54198;54199 54198 2 TYLLGTDLSIFK Unmodified 1369.7493 0.74931819 2554 Q8CI71 Ccdc132 Coiled-coil domain-containing protein 132 yes yes 0 0 0 0 10 0 1 87.623 87.623 3 0.0038865 28243 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.841 25.722 20.387 0 0 9.837 0 0 19 0 0 9 0 0 1 0 0 1 0 0 2013.5 20226 2554 19471 46799 54200 54200 1 TYLQALPYFDR Unmodified 1385.698 0.69795133 2754 Q91WD5;D3YXT0;A0A0A6YW30;A0A0A6YXD3 Ndufs2 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial yes no 0 0 0 0 10 1.87 1 1 1 1 75.681 75.681 2 1.7134E-07 28650 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.2 69.839 227.19 117.62 128.18 147.88 38.702 198.28 213 121 121 139 37 186 5 3 2 3 1 2 58983 20227 2754 19472 46800;46801;46802;46803 54201;54202;54203;54204;54205 54205 5 TYNFLPEYLASTQK Unmodified 1673.8301 0.83008771 3035 Q9D154;Z4YK03 Serpinb1a Leukocyte elastase inhibitor A yes no 0 0 0 0 9 0 1 77.817 77.817 3 8.7473E-05 26352 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.98 48.862 0 0 60.592 0 56.251 67.685 0 0 56 0 56 65 0 0 1 0 1 1 8638.9 20228 3035 19473 46804 54206 54206 1 TYPAHQNR Unmodified 985.47298 0.47297719 910 E9Q4P1;D3Z057;Q9DAD3 Wdfy1 yes no 0 0 0 0 5.5 0.5 1 1 20.027 20.027 3 0.0011773 2806 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.81 85.969 20.292 25.232 0 20.767 0 26.65 19 25 0 19 0 25 1 2 0 1 0 2 1854.8 20229 910 19474 46805;46806 54207;54208 54208 2 TYQLVYFLDK Unmodified 1288.6703 0.67033959 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 9 0 1 82.261 82.261 2 3.4752E-05 28373 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.24 56.52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20230 2686 19475 46807 54209 54209 1 TYSLGSALRPSTSR Unmodified 1494.7791 0.77905519 1423 P20152;A0A0A6YWC8;A2AKJ2 Vim Vimentin yes no 0 0 0 1 11.5 1.5 1 1 46.895 46.895 3 7.9771E-05 14695 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.885 47.155 248.05 137.18 217.12 86.668 193.51 0 232 130 213 83 185 0 1 1 2 1 1 0 37807 20231 1423 19476 46808;46809 54210;54211 54211 2 TYSTINPTDGSVICQVSLAQVSDVDK Unmodified 2796.3488 0.34875404 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 6 0 1 78.952 78.952 4 0.0024949 29026 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.016 20.556 0 29.792 0 0 57.288 0 0 28 0 0 56 0 0 1 0 0 2 0 4412.2 20232 2633 19477 46810 54212;54213 54212 2 TYSWDNAQVILAGNK Unmodified 1678.8315 0.83148469 1743 P62823;A0A286YDR2;Q9CXS2 Rab3c Ras-related protein Rab-3C yes no 0 0 0 0 8.33 0.471 2 1 72.341 72.341 2;3 3.763E-05 23679 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.297 76.046 0 204.28 191.22 217 234.39 285.95 0 195 195 213 243 274 0 1 1 3 3 2 43144 20233 1743 19478 46811;46812;46813 54214;54215;54216 54216 3 TYSWDNAQVLLVGNK Unmodified 1706.8628 0.86278482 1761 P63011;D3YZP5 Rab3a Ras-related protein Rab-3A yes no 0 0 0 0 9.14 1.81 1 2 2 1 1 76.589 76.589 2;3 2.2074E-32 29073 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 164.53 0 565.52 222.42 523.89 328.91 440.54 577.99 531 235 509 326 452 554 7 3 5 3 5 7 208740 20234 1761 19479 46814;46815;46816;46817;46818;46819;46820 54217;54218;54219;54220;54221;54222;54223;54224 54224 8 TYSYLTPDLWK Unmodified 1385.6867 0.68671794 1449 P25444;D3YVC1;D3YWJ3 Rps2 40S ribosomal protein S2 yes no 0 0 0 0 8 0 1 78.09 78.09 2 1.0024E-16 27151 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.78 86.173 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20235 1449 19480 46821 54225 54225 1 TYTDAMQNYNGNDER Oxidation (M);Deamidation (N) 1807.6955 0.69552108 1981 Q3UHG5;Q62283 Tspan7 Tetraspanin;Tetraspanin-7 yes no 0 1 1 0 2 0 1 39.077 39.077 3 0.00554 11471 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.434 35.513 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1218.6 20236 1981 19481 46822 54226 54226 790;791 160 1 TYTDAMQNYNGNDER Deamidation (N) 1791.7006 0.70060645 1981 Q3UHG5;Q62283 Tspan7 Tetraspanin;Tetraspanin-7 yes no 0 1 0 0 6 4.97 1 1 1 48.069 48.069 3 0.0022626 15784 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 59.513 55.342 159.5 53.228 18.185 89.165 82.611 57.339 149 56 19 83 83 56 3 2 1 2 1 1 13760 20237 1981 19481 46823;46824;46825 54227;54228;54229 54228 790;791 3 TYTIANQFPLNK Unmodified 1408.7351 0.73506511 3329 Q9WUA2 Farsb Phenylalanine--tRNA ligase beta subunit yes yes 0 0 0 0 9.5 0.5 1 1 67.746 67.746 3 0.00022552 21611 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.728 48.855 39.414 56.926 0 56 77.404 0 37 56 0 56 74 0 1 1 0 1 1 0 21936 20238 3329 19482 46826;46827 54230;54231 54230 2 TYVDPFTYEDPNQAVR Unmodified 1913.8796 0.8795571 1880 Q03137 Epha4 Ephrin type-A receptor 4 yes yes 0 0 0 0 4 0 1 69.257 69.257 3 0.037032 25003 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.191 20.643 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20239 1880 19483 46828 54232 54232 1 TYYMSAGLQPVPIVFR Unmodified 1840.9546 0.95457672 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 11 0.816 1 1 1 82.042 82.042 2;3 1.1321E-12 25514 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 124.62 107.34 40.387 18.373 158.03 42.266 114.91 100.12 38 19 149 46 115 97 2 1 3 1 2 2 119430 20240 3016 19484 46829;46830;46831 54233;54234;54235 54234 3 TYYNLITSFSELYLPST Unmodified 2010.9826 0.98262519 2374 Q8BGB7 Enoph1 Enolase-phosphatase E1 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 111.99 111.99 3 5.9123E-05 36116 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.673 47.844 15.423 12.48 0 5.2925 9.1709 4.264 15 12 0 5 9 4 3 2 0 1 1 1 14218 20241 2374 19485 46832;46833;46834;46835 54236;54237;54238;54239 54237 4 VAAAFPGDVDR Unmodified 1116.5564 0.55637247 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 6 0 1 54.543 54.543 2 0.004864 17513 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.334 36.77 0 67.616 92.377 94.109 108.15 105.65 0 65 93 93 111 102 0 1 1 1 1 1 5241.4 20242 3331 19486 46836 54240 54240 1 VAAFDLDGVLALPSIAGAFR Unmodified 2002.0888 0.088762013 1511 P34914 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes yes 0 0 0 0 9.5 0.5 1 1 103.99 103.99 3 1.0082E-10 36687 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.937 68.868 6.408 12.179 9.3644 0 0 6.396 6 12 9 0 0 6 1 2 1 0 0 1 4263.9 20243 1511 19487 46837;46838 54241;54242 54241 2 VAAGHELQPLAIVDQRPSSR Unmodified 2143.1498 0.14979914 1439 P23242 Gja1 Gap junction alpha-1 protein yes yes 0 0 0 1 7.5 0.5 1 1 53.817 53.817 4 8.0166E-08 15598 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.335 56.174 138.09 166.8 94.105 124.69 103.69 0 130 167 102 121 102 0 2 2 2 2 1 0 13799 20244 1439 19488 46839;46840 54243;54244 54244 2 VAAGLQIK Unmodified 798.49634 0.49633839 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 10.2 1.47 2 2 1 55.969 55.969 2;3 0.0023852 15953 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 128.38 50.634 561.39 343.59 393.96 35.485 591.26 279.6 527 357 380 37 576 268 4 3 3 1 4 2 46417 20245 1798 19489 46841;46842;46843;46844;46845 54245;54246;54247;54248;54249 54245 5 VAAGQEPK Unmodified 798.42357 0.42356738 924 E9Q7F8;F8WH96;Q9CPS6 Hint3 Histidine triad nucleotide-binding protein 3 yes no 0 0 0 0 5.5 0.5 1 1 36.247 36.247 2 0.0068498 8870 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.01 52.243 88.698 26.473 38.157 107.9 69.807 76.892 83 28 37 102 74 74 2 1 1 2 2 2 6595.5 20246 924 19490 46846;46847 54250;54251 54251 2 VAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSR Unmodified 3632.8356 0.83559038 1878 Q02248;F7CRC6 Ctnnb1 Catenin beta-1 yes no 0 0 0 1 6 0 1 97.341 97.341 4 5.1209E-12 36635 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.372 53.503 0 9.4889 5.2105 15.986 5.2173 9.4451 0 9 6 15 6 9 0 1 1 1 1 1 1630.2 20247 1878 19491 46848 54252 54252 1 VAALQNLVK Unmodified 954.58622 0.58621603 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 10 0 1 67.394 67.394 3 0.0012894 19224 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.809 51.083 69.468 54.9 0 110.17 70.032 67.292 65 56 0 102 74 65 1 1 0 1 1 1 12477 20248 1798 19492 46849 54253 54253 1 VAALQTAADAFYK Unmodified 1367.7085 0.70851601 1076 G3X8X7;Q920Q4 Vps16 Vacuolar protein sorting-associated protein 16 homolog yes no 0 0 0 0 9 0 1 75.182 75.182 3 0.00049066 25043 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.989 45.431 0 74 0 0 0 0 0 74 0 0 0 0 0 1 0 0 0 0 4374.2 20249 1076 19493 46850 54254 54254 1 VAALTGLPFVTAPNK Unmodified 1497.8555 0.8555146 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 9.5 4.92 1 2 1 81.466 81.466 2;3;4 2.1179E-05 31459 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.678 51.8 56 29.017 46.384 36.981 46.003 0 56 28 46 37 46 0 1 1 1 1 2 0 19807 20250 1857 19494 46851;46852;46853;46854 54255;54256;54257;54258 54258 4 VAANAPK Unmodified 669.38097 0.38097428 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 10 2.16 1 1 1 36.062 36.062 2;3 0.023216 9429 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.29 72.617 894.17 880.25 816.98 1116.2 1289.8 148.17 842 890 854 1088 1273 139 3 2 3 3 2 1 70200 20251 2185 19495 46855;46856;46857 54259;54260;54261 54261 3 VAAPDVVVPTLDTVR Unmodified 1550.8668 0.86680757 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 8.67 3.09 1 1 1 71.883 71.883 2;3 3.0502E-05 24825 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.022 43.479 108.91 111.05 46.356 59.272 90.91 106.14 102 112 47 56 93 102 2 3 2 2 3 3 18311 20252 3204 19496 46858;46859;46860 54262;54263;54264 54263 3 VAAQAVEDVLHIAR Unmodified 1490.8205 0.82052608 2504 Z4YK42;Q8C5H8 Nadk2 NAD kinase 2, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 74.228 74.228 3 5.579E-05 26835 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.55 58.168 0 48.671 16.34 58.651 84.171 29.079 0 46 19 56 84 28 0 1 1 2 2 1 9159.4 20253 2504 19497 46861;46862 54265;54266 54265 2 VAAQGEVVR Unmodified 927.51378 0.51377937 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 5 0 1 36.783 36.783 2 0.0061215 9595 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.985 48.248 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20254 2536 19498 46863 54267 54267 1 VAASNIVQMK Unmodified 1059.5747 0.57466507 3312 Q9R1P3 Psmb2 Proteasome subunit beta type-2 yes yes 0 0 0 0 8.5 0.5 1 1 57.348 57.348 2 1.4547E-08 16599 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 148.96 97.992 39.701 0 28.617 67.218 112.76 37.857 37 0 28 65 112 37 1 0 1 2 2 1 8173.7 20255 3312 19499 46864;46865 54268;54269 54269 2 VAASQLTCLGCLELIAK Unmodified 1845.9692 0.9692405 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 13 0 1 70.834 70.834 3 0.01831 26323 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 35.757 0.84725 0 116.32 106.77 142.72 151.39 213.14 0 111 111 139 158 204 0 1 1 1 1 1 31662 20256 2543 19500 46866 54270 54270 1 VAASTGIDLLLLDDFK Unmodified 1689.9189 0.91890272 1997 Q3UMR5 Mcu Calcium uniporter protein, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 96.084 96.084 3 1.7394E-05 34708 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.439 78.058 0 23.408 0 0 0 15.99 0 22 0 0 0 15 0 1 0 0 0 1 897.56 20257 1997 19501 46867;46868 54271;54272 54271 2 VAAVDADDGENAR Unmodified 1301.5848 0.58477206 841 Q6P0A6;Q925I8;E9PX28;E9PXQ7 Pcdh10 yes no 0 0 0 0 1 0 1 39.483 39.483 2 0.00052479 11038 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.108 67.96 0 9.576 0 20.767 0 9.594 0 9 0 19 0 9 0 1 0 1 0 1 1531.3 20258 841 19502 46869 54273 54273 1 VAAVQPPEEGPSR Unmodified 1335.6783 0.67827852 2377 Q8BGD9 Eif4b Eukaryotic translation initiation factor 4B yes yes 0 0 0 0 4 0 1 44.702 44.702 3 0.001753 13764 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.951 29.837 0 0 48.695 48.469 0 59.696 0 0 47 47 0 56 0 0 2 2 0 2 2878.8 20259 2377 19503 46870 54274;54275 54275 2 VAAYAAQLEQYQK Unmodified 1481.7514 0.75144346 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 9.25 2.28 2 2 2 2 67.241 67.241 2;4 4.4958E-23 22024 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 165.11 126.54 188.22 140.13 248.83 125.78 197.29 365.41 177 140 237 121 194 346 5 4 4 3 3 6 53501 20260 1478 19504 46871;46872;46873;46874;46875;46876;46877;46878 54276;54277;54278;54279;54280;54281;54282;54283 54278 8 VAAYGGK Unmodified 664.35443 0.35442518 611 E9PZ16;B1B0C7;Q05793 Hspg2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide yes no 0 0 0 0 8 0 1 41.347 41.347 2 0.030968 9812 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.377 38.875 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20261 611 19505 46879 54284 54284 1 VACTCDQKPCNCPK Unmodified 1736.7103 0.7102654 1579 P48320 Gad2 Glutamate decarboxylase 2 yes yes 0 0 0 1 7 0 1 38.977 38.977 4 0.00011651 9433 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.466 58.508 0 0 48.538 27.711 0 29.848 0 0 46 28 0 28 0 0 1 1 0 1 2187.7 20262 1579 19506 46880 54285 54285 1 VADALANAAGHLDDLPGALSALSDLHAHK Deamidation (N) 2863.4464 0.44643467 2735 Q91VB8 haemaglobin alpha 2 yes yes 0 1 0 0 6 0 1 80.559 80.559 5 8.3136E-26 29650 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.984 61.606 39.023 84.981 41.861 58.713 0 0 37 83 46 56 0 0 1 1 1 1 0 0 8393.2 20263 2735 19507 46881 54286 54286 983 1 VADALANAAGHLDDLPGALSALSDLHAHK Unmodified 2862.4624 0.46241909 2735 Q91VB8 haemaglobin alpha 2 yes yes 0 0 0 0 9.22 1.75 1 3 2 1 1 1 85.227 85.227 4;5 2.2765E-37 31186 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.73 105.53 414.99 92.062 537.35 583.05 627.64 518.44 389 93 519 576 631 501 5 3 6 9 6 7 185880 20264 2735 19507 46882;46883;46884;46885;46886;46887;46888;46889;46890 54287;54288;54289;54290;54291;54292;54293;54294;54295;54296;54297;54298 54287 12 VADEAFYK Unmodified 941.44945 0.44944778 599 B1AWD8;B1AWD9;O08585 Clta Clathrin light chain A yes no 0 0 0 0 7.75 3.11 1 1 1 1 56.243 56.243 2 0.0011922 19035 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 136.16 85.548 1145.6 941.41 1249.5 768.63 906.45 1118 1079 960 1244 762 920 1065 4 3 4 3 3 3 170530 20265 599 19508 46891;46892;46893;46894 54299;54300;54301;54302 54299 4 VADERDR Unmodified 859.41479 0.41479361 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 1 1 0 1 20.282 20.282 3 0.03622 3079 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.255 7.2619 11.639 12.766 16.797 17.348 12.337 13.506 11 13 17 17 13 13 1 1 1 1 1 1 2090 20266 581 19509 46895 54303 54303 1 VADGQISTEVSEAPVASDKPK Unmodified 2127.0695 0.069542713 1496 P31648 Slc6a1 Sodium- and chloride-dependent GABA transporter 1 yes yes 0 0 0 1 8.5 4.5 1 1 55.936 55.936 4 6.6799E-11 19365 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.201 72.19 219.77 328.21 292.93 243.95 0 211.07 207 327 300 234 0 198 1 2 2 1 0 1 38193 20267 1496 19510 46896;46897 54304;54305 54304 2 VADIALHYANK Unmodified 1213.6455 0.64552182 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 8.5 0.5 1 1 59.224 59.224 3 0.0011093 18363 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.5 42.671 148.47 155.95 205.21 121.48 153.72 173.64 139 148 204 120 158 167 1 1 2 1 1 1 37606 20268 1543 19511 46898;46899 54306;54307 54306 2 VADIGLAAWGR Unmodified 1127.6087 0.60874239 1594 P50247;A2ALT5 Ahcy Adenosylhomocysteinase yes no 0 0 0 0 8 0 1 71.472 71.472 2 0.0073548 23976 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.56 40.112 108.88 0 95.895 93.874 109.52 66.165 102 0 93 93 111 65 1 0 1 1 1 1 11491 20269 1594 19512 46900 54308 54308 1 VADIIAEVAK Unmodified 1027.5914 0.59136099 919;937 E9Q6Q4;A0A0G2JGC8;A0A0G2JF70;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 7 0.816 1 1 1 78.591 78.591 2;3 0.00057052 28051 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.869 44.02 29.856 172.76 110.76 112.18 145.91 194.11 28 166 111 112 148 186 1 3 1 2 2 3 20632 20270 919;937 19513 46901;46902;46903 54309;54310;54311;54312 54311 4 VADKIQLINNMLDK Unmodified 1613.8811 0.88107742 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 1 11.5 0.5 1 1 80.906 80.906 4 0.00082595 24914 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.704 41.146 99.789 29.152 38.285 39.747 172.86 0 93 28 37 37 167 0 1 1 1 1 2 0 20945 20271 1334 19514 46904;46905 54313;54314;54315 54313 3 VADLYELVQYAGNIIPR Unmodified 1933.0309 0.030912783 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 10.5 0.5 1 1 105.25 105.25 3 6.1432E-06 33567 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.47 53.251 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 6680.6 20272 3174 19515 46906;46907 54316;54317 54316 2 VADPDHDHTGFLTEYVATR Unmodified 2142.997 0.99704647 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 0 5 0.816 1 1 1 57.948 57.948 4 9.0544E-08 19021 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.01 68.399 78.624 92.351 77.735 40.441 112.85 94.852 74 93 74 37 111 92 2 3 1 1 2 2 41490 20273 1769 19516 46908;46909;46910 54318;54319;54320 54320 3 VADPISTFLFSICALGSTAPTLR Unmodified 2436.2723 0.27228204 1851 P97441;S4R169 Slc30a3 Zinc transporter 3 yes no 0 0 0 0 7 6 1 1 115.67 115.67 3 1.9442E-16 35507 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.873 90.062 7.511 0 1.8768 11.911 0 11.726 7 0 2 11 0 11 1 0 1 2 0 2 2914.8 20274 1851 19517 46911;46912 54321;54322 54321 2 VADPSYLPTQQDVLR Unmodified 1700.8733 0.87334951 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 8 3.56 1 1 1 64.925 64.925 2;3 1.2525E-11 22352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 121.76 49.079 189.14 202.45 46.882 128.29 198.83 282.15 177 203 46 120 204 270 2 3 1 1 2 3 38382 20275 1428 19518 46913;46914;46915 54323;54324;54325 54324 3 VADQLWVPDTYFLNDK Unmodified 1922.9414 0.94142907 1774;1011 P63137;A0A0G2JGS8;P50571;F6WUM4;Q8C446;F6ZYH6;P63080 Gabrb2;Gabrb1;Gabrb3 Gamma-aminobutyric acid receptor subunit beta-2;Gamma-aminobutyric acid receptor subunit beta-1;Gamma-aminobutyric acid receptor subunit beta-3 no no 0 0 0 0 7 0 1 88.275 88.275 3 0.03214 32502 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 33.697 15.559 0 29.792 0 0 28.987 8.7668 0 28 0 0 28 9 0 1 0 0 1 1 1573.1 20276 1774;1011 19519 46916 54326 54326 1 VADQLWVPDTYFLNDKK Unmodified 2051.0364 0.036392091 1774;1011 P63137;A0A0G2JGS8;P50571;F6WUM4;Q8C446;F6ZYH6;P63080 Gabrb2;Gabrb1;Gabrb3 Gamma-aminobutyric acid receptor subunit beta-2;Gamma-aminobutyric acid receptor subunit beta-1;Gamma-aminobutyric acid receptor subunit beta-3 no no 0 0 0 1 9.33 2.62 1 1 1 80.025 80.025 3;4 9.2738E-05 30715 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.827 43.571 98.98 109.45 118.33 124.12 185.91 85.821 93 111 121 121 186 84 2 3 3 2 3 2 8907.9 20277 1774;1011 19520 46917;46918;46919 54327;54328;54329 54329 3 VADYIPQLAK Unmodified 1116.6179 0.61791009 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 9.5 2.57 2 1 1 2 70.772 70.772 2;3 2.7645E-05 22961 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.56 74.654 168.66 134.72 297.79 116.7 259.95 268.68 158 129 288 121 260 259 3 2 4 3 4 4 70007 20278 789 19521 46920;46921;46922;46923;46924;46925 54330;54331;54332;54333;54334;54335 54333 6 VAEAFAR Unmodified 762.40244 0.40243801 1994;1368 Q3ULJ0;D3Z0L6;P13707;E0CXN5 Gpd1l;Gpd1 Glycerol-3-phosphate dehydrogenase 1-like protein;Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic;Glycerol-3-phosphate dehydrogenase [NAD(+)] no no 0 0 0 0 8.67 3.09 1 1 1 45.258 45.258 2 0.01429 13231 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.72 57.619 604.18 291.73 640.2 420.83 637.32 616.08 568 306 628 417 648 595 3 2 3 2 3 3 66004 20279 1994;1368 19522 46926;46927;46928 54336;54337;54338 54336 3 VAEAVATFLIR Unmodified 1188.6867 0.68665836 2465 Q8BVQ5 Ppme1 Protein phosphatase methylesterase 1 yes yes 0 0 0 0 11 0 1 85.119 85.119 3 0.0012275 26793 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.103 42.575 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2712.3 20280 2465 19523 46929 54339 54339 1 VAEDDEDDDVDTKK Unmodified 1592.669 0.6689552 1456 P26350 Ptma Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha yes yes 0 0 0 1 5.4 3.83 2 2 1 44.397 44.397 3;4 7.2928E-05 14224 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 84.468 77.41 49.358 253.3 186.96 294.41 160.61 333.98 46 241 186 277 158 315 1 4 3 4 2 3 38578 20281 1456 19524 46930;46931;46932;46933;46934 54340;54341;54342;54343;54344 54341 5 VAEDEFDPIPVLITK Unmodified 1684.8924 0.89235362 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 5.75 0.829 2 1 1 88.031 88.031 3;4 1.6882E-05 32466 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.706 59.753 118.97 167.51 183.17 46.557 92.145 156.47 112 167 181 47 93 149 4 4 5 2 4 5 23040 20282 1983 19525 46935;46936;46937;46938 54345;54346;54347;54348;54349;54350 54350 6 VAEDETEAGVK Unmodified 1146.5404 0.54044763 1348 P10852;A0A0U1RP98;A0A0U1RPG5;A0A0U1RP32 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 6 4.97 1 1 1 45.147 45.147 2;3 3.2893E-14 14331 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 159.4 106.08 198.48 117.59 85.358 242.76 304.66 124.04 186 120 83 232 306 121 4 3 1 4 4 2 31496 20283 1348 19526 46939;46940;46941 54351;54352;54353;54354;54355 54353 5 VAEDLESEGLMAEEVQAVQQQEVYGAMPR Unmodified 3205.4907 0.49074361 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 3.5 0.5 1 1 89.025 89.025 3;4 9.4834E-40 33579 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.45 94.888 3.1998 0 3.2299 0 5.9578 5.2456 3 0 3 0 6 5 1 0 1 0 2 1 3329.7 20284 551 19527 46942;46943 54356;54357;54358 54358 3 VAEEELDTEDRPAWNSK Unmodified 1987.9123 0.91231379 164 A0A0R4J087;Q8BJI1;A0A0R4J252;E9Q4S9 Slc6a17 Sodium-dependent neutral amino acid transporter SLC6A17;Transporter yes no 0 0 0 1 3 0 1 55.875 55.875 4 0.0003738 19400 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 54.368 33.718 29.632 27.019 46.379 36.43 66.317 0 28 28 46 37 65 0 1 1 1 1 1 0 3607.4 20285 164 19528 46944 54359 54359 1 VAEELALEQAK Unmodified 1199.6398 0.63976774 742 D3Z0L4;Q9D9P1;Q9CRB9;S4R238 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 4.5 0.5 1 1 62.552 62.552 2;3 0.00011532 21910 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.258 59.849 0 77.835 53.881 45.828 65.885 0 0 74 56 46 65 0 0 1 1 1 1 0 8228.6 20286 742 19529 46945;46946 54360;54361 54361 2 VAEEWAQGTFK Unmodified 1264.6088 0.60880197 803 E0CY49;Q91YI0 Asl Argininosuccinate lyase yes no 0 0 0 0 6 0 1 65.848 65.848 3 0.0032847 22807 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.836 32.177 39.414 56.926 0 0 36.688 58.649 37 56 0 0 37 56 1 1 0 0 1 1 2403.1 20287 803 19530 46947 54362 54362 1 VAEFHTELER Unmodified 1229.6041 0.60405094 1921 Q3TG45;Q9CPS5;Q9CX56 Psmd8 26S proteasome non-ATPase regulatory subunit 8 yes no 0 0 0 0 8.5 4.5 1 1 47.047 47.047 3 0.00066103 15035 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.865 62.079 0 185.35 114.24 181.19 232.41 171.39 0 176 120 176 234 167 0 2 1 2 1 1 14143 20288 1921 19531 46948;46949 54363;54364 54363 2 VAEGEAGDQPGSR Unmodified 1271.5742 0.57420737 3048 Q9D2E2 Toe1 Target of EGR1 protein 1 yes yes 0 0 0 0 1 0 1 31.749 31.749 3 0.0031289 7595 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.101 13.082 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20289 3048 19532 46950 54365 54365 1 VAEGIFETEAPGGYK Unmodified 1566.7566 0.75658842 2899 Q9CPV4;E9Q197;F6ZTG3 Glod4 Glyoxalase domain-containing protein 4 yes no 0 0 0 0 5.5 0.5 1 1 68.461 68.461 3;4 1.709E-06 23969 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.58 82.591 80.031 34.588 45.346 46.025 110.7 95.979 75 37 46 46 111 93 2 1 1 1 2 2 9176.4 20290 2899 19533 46951;46952 54366;54367 54367 2 VAEIEHAEK Unmodified 1024.5189 0.51892433 1823 P80314 Cct2 T-complex protein 1 subunit beta yes yes 0 0 0 0 4 0 1 43.151 43.151 3 0.00075807 12952 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.681 54.428 118.25 0 143.41 143.38 0 178.02 111 0 139 139 0 167 1 0 1 1 0 1 10360 20291 1823 19534 46953 54368 54368 1 VAEIPFNSTNK Deamidation (N) 1219.6085 0.60846762 106;2253 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q6PIE5;D3YYN7;Q9WV27 Atp1a3;Atp12a;Atp1a2;Atp1a4 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 no no 0 1 0 0 7 2.77 2 2 1 1 63.717 63.717 3 3.7206E-08 21639 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.9 97.654 503.05 313.32 486.48 138.41 270.96 466.92 473 334 467 130 271 444 6 6 4 3 3 5 108740 20292 106;2253 19535 46954;46955;46956;46957;46958;46959 54369;54370;54371;54372;54373;54374 54371 45 6 VAEIPFNSTNK Unmodified 1218.6245 0.62445203 106;2253 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q6PIE5;D3YYN7;Q9WV27 Atp1a3;Atp12a;Atp1a2;Atp1a4 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4 no no 0 0 0 0 9 2.45 1 1 3 1 2 60.292 60.292 2;3;4 7.3645E-15 19456 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 159.09 102.04 1043.9 654.56 760.82 910.33 555.24 1306 979 660 755 882 571 1240 9 5 6 10 6 10 688070 20293 106;2253 19535 46960;46961;46962;46963;46964;46965;46966;46967 54375;54376;54377;54378;54379;54380;54381;54382;54383;54384;54385 54376 11 VAEKEPINK Unmodified 1026.571 0.5709599 816 E9PUE7;Q5SSL4 Abr Active breakpoint cluster region-related protein yes no 0 0 0 1 7 0 1 43.249 43.249 3 0.026111 11345 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.59 28.691 0 0 57.141 77.476 0 59.696 0 0 56 74 0 56 0 0 1 1 0 1 5245.3 20294 816 19536 46968 54386 54386 1 VAELEEEQSQGSSSYSDWVK Unmodified 2257.0023 0.0022510091 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4 0 2 69.872 69.872 3;4 2.2537E-07 25291 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.639 56.158 39.701 0 28.601 38.041 95.531 0 37 0 28 37 93 0 1 0 1 1 2 0 9350.7 20295 510 19537 46969;46970 54387;54388 54387 2 VAEPAQR Unmodified 769.40825 0.40825167 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 0 7.33 4.03 1 1 1 28.364 28.364 2 0.026678 5688 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 99.139 41.58 138.29 43.156 164.81 147.24 80.929 116.02 130 46 158 148 84 111 2 1 2 2 2 2 80786 20296 3371 19538 46971;46972;46973 54389;54390;54391 54390 3 VAEQTPLSALYLASLIK Unmodified 1816.0346 0.034601177 3009 Q9CZS1 Aldh1b1 Aldehyde dehydrogenase X, mitochondrial yes yes 0 0 0 0 9.5 0.5 1 1 95.963 95.963 3 7.1412E-06 34299 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.714 53.558 0 20.216 20.558 20.767 19.874 29.848 0 19 19 19 19 28 0 1 1 1 1 1 14739 20297 3009 19539 46974;46975 54392;54393 54392 2 VAEQTPLTALYVANLIK Unmodified 1843.0455 0.045500215 1562 P47738;A0A0G2JEU1;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 10.8 1.48 1 1 1 1 90.882 90.882 3 3.2431E-25 32236 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 136.34 97.976 102.94 62.163 164.69 60.115 176.33 115.2 97 64 157 60 175 112 3 2 4 2 4 3 55246 20298 1562 19540 46976;46977;46978;46979 54394;54395;54396;54397;54398 54394 5 VAEQVGIDK Unmodified 957.51311 0.51311067 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 0 5.5 0.5 1 1 51.574 51.574 2;3 0.0057769 16074 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.417 31.81 59.808 55.551 29.072 107.15 138.49 57.58 56 56 28 102 139 56 1 1 1 2 2 1 9098.1 20299 2129 19541 46980;46981 54399;54400 54400 2 VAEQVGIDKGDIPDLTQAPSSLMETLEQHLNTLEGK Unmodified 3875.9463 0.94626304 2129 Q61548;E9Q9A3;E9QQ05;E9QLK9;Q3TWS4 Snap91 Clathrin coat assembly protein AP180 yes no 0 0 0 1 13 0 1 95.8 95.8 4 4.8169E-06 38401 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.735 37.149 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2467.5 20300 2129 19542 46982 54401 54401 1 VAEQVGIDR Unmodified 985.51926 0.51925868 2280 Q7M6Y3;A0A1L1SUR7;A0A140LHQ8 Picalm Phosphatidylinositol-binding clathrin assembly protein yes no 0 0 0 0 4 0 1 44.257 44.257 2 0.002596 13520 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.309 44.594 0 47.49 86.957 0 0 0 0 46 83 0 0 0 0 1 1 0 0 0 8129.4 20301 2280 19543 46983 54402 54402 1 VAEVEGEK Unmodified 859.42871 0.42871234 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 0 4 0 1 44.139 44.139 2 0.043526 13435 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.27 23.983 59.671 0 70.029 0 0 0 56 0 65 0 0 0 1 0 1 0 0 0 3908.8 20302 3395 19544 46984 54403 54403 1 VAEVLAGEGHLYSR Unmodified 1499.7732 0.77324153 1412 P19096 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes yes 0 0 0 0 6 0 1 58.232 58.232 3 0.00017251 19295 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.729 50.984 48.612 44.195 87.991 0 48.116 0 46 46 84 0 46 0 1 1 1 0 1 0 5457.8 20303 1412 19545 46985 54404 54404 1 VAEVLFDAADANAIEEVNLAYENVK Unmodified 2706.3388 0.33884128 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5 0 1 101.19 101.19 4 0.00086926 36050 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.986 32.994 9.6442 2.5417 0 0 0 0 9 3 0 0 0 0 1 1 0 0 0 0 1064.9 20304 3204 19546 46986 54405 54405 1 VAEVLQVPPMR Unmodified 1237.6853 0.68527815 3074 Q9D6J6;M0QWP9;D6RGN4 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 0 0 8 0 1 67.253 67.253 3 0.0012681 22088 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.624 31.69 0 39.368 0 30.604 0 0 0 37 0 28 0 0 0 1 0 1 0 0 2641.4 20305 3074 19547 46987 54406 54406 1 VAFITGGGTGLGK Unmodified 1176.6503 0.65027285 2912 Q9CQ62 Decr1 2,4-dienoyl-CoA reductase, mitochondrial yes yes 0 0 0 0 11.5 0.5 1 1 67.628 67.628 3 1.7787E-05 18976 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 102.87 61.332 298.29 0 0 336.64 0 401.88 278 0 0 308 0 377 1 0 0 1 0 1 35922 20306 2912 19548 46988;46989 54407;54408 54407 2 VAFSALR Unmodified 762.43882 0.43882351 1370 P14106 C1qb Complement C1q subcomponent subunit B yes yes 0 0 0 0 13 0 1 53.92 53.92 2 0.031981 18215 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.699 0 138.94 108.74 0 151.93 0 0 130 111 0 139 0 0 1 1 0 1 0 0 10162 20307 1370 19549 46990 54409 54409 1 VAFTGSTEVGHLIQK Unmodified 1585.8464 0.84640648 3009 Q9CZS1 Aldh1b1 Aldehyde dehydrogenase X, mitochondrial yes yes 0 0 0 0 8 0 1 63.316 63.316 3 0.059533 20127 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.285 12.707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20308 3009 19550 46991 54410 54410 1 VAFTGSTEVGHLIQVAAGSSNLK Deamidation (N) 2286.1856 0.18557552 1562 P47738;A0A0G2JEU1 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 1 0 0 10 0 1 79.449 79.449 4 0.00033979 24882 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.982 24.828 39.052 65.633 53.481 66.814 55.507 0 37 65 56 65 56 0 1 1 1 1 1 0 6253 20309 1562 19551 46992 54411 54411 591 1 VAFTGSTQVGK Unmodified 1093.5768 0.57677356 1447 P24549 Aldh1a1 Retinal dehydrogenase 1 yes yes 0 0 0 0 9 0 1 53.103 53.103 3 1.5971E-10 14585 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.68 57.217 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20310 1447 19552 46993 54412 54412 1 VAFVNWINK Unmodified 1089.5971 0.59711507 2018 Q3V0K9;D3Z6J7 Pls1 Plastin-1 yes no 0 0 0 0 1 0 1 77.561 77.561 3 0.014605 27003 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 51.727 17.724 39.4 0 50.655 0 0 20.254 37 0 47 0 0 19 1 0 1 0 0 1 1239.3 20311 2018 19553 46994 54413 54413 1 VAGAVTELIQAAEAMK Unmodified 1600.8494 0.84944294 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 9 0 1 100.45 100.45 3 6.4834E-06 35831 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.441 56.836 0 12.768 0 0 0 20.254 0 12 0 0 0 19 0 1 0 0 0 1 2524.9 20312 287 19554 46995 54414 54414 1 VAGEGLSVDYAFSR Unmodified 1469.7151 0.71505795 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 9.5 3.5 1 1 65.946 65.946 2;3 0.00093542 22879 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.212 45.974 68.741 92.81 90.167 77.711 79.922 96.857 65 93 92 74 83 93 2 2 2 1 2 2 8983.6 20313 3249 19555 46996;46997 54415;54416 54415 2 VAGGASASSR Unmodified 861.43044 0.43044367 1135 I7HJQ9;Q9Z2C4;I7HPV7;F6T9H9 Mtmr1 Myotubularin-related protein 1 yes no 0 0 0 0 9.5 3.5 1 1 23.996 23.996 2 0.0012539 3723 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.783 59.847 14.952 13.888 14.048 60.772 36.761 23.469 14 14 14 57 37 23 1 1 1 2 1 1 3965 20314 1135 19556 46998;46999 54417;54418 54417 2 VAGHPLAQNER Unmodified 1190.6156 0.61561868 1258 Q78ZM0;O70492;D3Z789;D3Z6Z0 Snx3 Sorting nexin-3 yes no 0 0 0 0 8.5 2.69 1 1 1 1 29.208 29.208 3 0.011054 5157 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.466 14.934 69.013 53.633 154.32 89.921 171.94 203.21 65 56 149 88 175 195 2 2 3 2 4 3 16471 20315 1258 19557 47000;47001;47002;47003 54419;54420;54421;54422 54420 4 VAGIAAALGGGVLGFTGGK Unmodified 1614.9093 0.90934108 3024 Q9D0I4 Stx17 Syntaxin-17 yes yes 0 0 0 0 1 0 1 90.732 90.732 3 2.6807E-05 32311 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.345 45.187 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1189 20316 3024 19558 47004 54423 54423 1 VAGIHKK Unmodified 751.47046 0.47045799 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 1 10 0 1 35.454 35.454 4 0.010736 6155 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.335 56.3 0 194.61 260.98 145.89 191.34 172.56 0 187 258 151 195 167 0 1 1 1 1 1 4614.2 20317 1574 19559 47005 54424 54424 1 VAGILTVK Unmodified 799.51674 0.51673948 2843 Q99KI0;A0A2R8W744 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 9.4 4.32 1 1 1 1 1 63.993 63.993 2;3 0.0013105 22938 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.11 48.845 711.84 729.81 557.03 448.33 548.82 536.77 676 747 557 450 562 517 3 4 2 3 3 2 472910 20318 2843 19560 47006;47007;47008;47009;47010 54425;54426;54427;54428;54429 54429 5 VAGLAVFHGK Unmodified 997.5709 0.57090032 844 E9PXB7;Q8CFI0;A0A286YCM8;G3X9H8 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 11.5 0.5 1 1 55.935 55.935 3 0.00073449 13844 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.239 44.295 0 0 230.77 0 46.477 47.71 0 0 227 0 46 46 0 0 2 0 1 1 18649 20319 844 19561 47011;47012 54430;54431 54430 2 VAGLPLISSTYGMVSAAYTSTK Unmodified 2216.1399 0.13987088 3124 Q9DBG5 Plin3 Perilipin-3 yes yes 0 0 0 0 12 0 1 91.836 91.836 3 6.2571E-07 26248 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.032 48.114 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 1859.6 20320 3124 19562 47013 54432 54432 1 VAGMDVELTVEER Unmodified 1446.7024 0.70244436 1715 P62259;D6REF3;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 4.33 0.471 2 1 66.917 66.917 2;3 3.8304E-15 23970 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 138.71 100.35 100.53 18.196 39.757 79.606 66.993 98.331 94 19 38 75 65 93 4 1 1 3 2 3 8138.5 20321 1715 19563 47014;47015;47016 54433;54434;54435;54436;54437 54435 5 VAGPWGPGLVQR Unmodified 1235.6775 0.67749065 1964 Q8C0M2;Q3U7M5;Q8VD66;A0A0G2JE28;A0A0G2JDM2 Abhd4 Abhydrolase domain-containing protein 4 yes no 0 0 0 0 10 0 1 63.158 63.158 2 0.020124 17405 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.346 15.466 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20322 1964 19564 47017 54438 54438 1 VAGQDGSVVQFK Unmodified 1233.6354 0.63535107 1059 G3UZ60;G3UWI9;G3UWX9;G3UZA7;Q9Z172;G3UZX6;H7BWX9;D3Z794;P61957 Sumo3;Sumo2 Small ubiquitin-related modifier;Small ubiquitin-related modifier 3;Small ubiquitin-related modifier 2 yes no 0 0 0 0 7.5 0.5 1 1 57.521 57.521 2;3 4.6129E-20 18084 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 152.64 110.35 49.074 56.275 0 0 0 0 46 56 0 0 0 0 1 1 0 0 0 0 7119.1 20323 1059 19565 47018;47019 54439;54440 54439 2 VAGTGEGGLEELVEELNSGK Unmodified 1986.9746 0.9745797 2154 Q62418 Dbnl Drebrin-like protein yes yes 0 0 0 0 7 3.54 1 1 1 1 89.021 89.021 3 3.4577E-40 33996 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.32 128.49 44.929 41.7 0 30.262 103.53 56.486 42 42 0 28 103 55 2 3 0 1 4 2 18606 20324 2154 19566 47020;47021;47022;47023 54441;54442;54443;54444;54445 54442 5 VAGYAAQLEQYQK Unmodified 1467.7358 0.73579339 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 8.5 2.69 1 1 1 1 64.231 64.231 3 1.7764E-18 22941 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.97 96.163 207.57 259.26 138.83 47.576 205.77 230.78 195 259 139 46 203 222 2 3 2 1 2 3 36911 20325 3106 19567 47024;47025;47026;47027 54446;54447;54448;54449 54449 4 VAHLALK Unmodified 750.47521 0.47520902 1183 O35226 Psmd4 26S proteasome non-ATPase regulatory subunit 4 yes yes 0 0 0 0 10.5 0.5 1 1 46.771 46.771 3 0.0073345 10230 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.377 40.835 196.7 219.43 210.11 319.42 192.02 384.68 185 222 209 307 198 366 1 2 1 2 1 2 29835 20326 1183 19568 47028;47029 54450;54451 54451 2 VAHQAGDR Unmodified 852.42021 0.42021334 900 Q9EQK5;E9Q3X0 Mvp Major vault protein yes no 0 0 0 0 4 0 1 17.316 17.316 3 0.020346 2427 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.754 31.132 8.5438 4.6974 2.7824 3.1132 0 0 8 5 3 3 0 0 1 1 1 1 0 0 464.76 20327 900 19569 47030 54452 54452 1 VAIDLGYR Unmodified 905.49707 0.49706667 1548 P45376;D3YVJ7 Akr1b1;Akr1b3 Aldose reductase yes no 0 0 0 0 7.5 0.5 1 1 59.998 59.998 2 0.015932 19277 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.716 34.868 117.73 82.319 160.58 84.446 181.35 241.07 111 83 157 83 185 231 2 1 2 1 2 2 26911 20328 1548 19570 47031;47032 54453;54454 54453 2 VAIHYINPPNPAK Unmodified 1432.7827 0.78268401 2502 Q8C570 Rae1 mRNA export factor yes yes 0 0 0 0 10 0 1 53.821 53.821 3 0.0026283 13240 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 55.452 35.712 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20329 2502 19571 47033 54455 54455 1 VAILAEK Unmodified 742.45889 0.45889025 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 10 2.16 1 1 1 58.648 58.648 2 0.027111 18181 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.041 31.836 286.5 196.34 87.965 446.57 210.96 558.96 268 194 93 417 223 530 2 2 1 3 2 3 101170 20330 1400;1401 19572 47034;47035;47036 54456;54457;54458 54456 3 VAIQLNDTHPALSIPELMR Unmodified 2117.1303 0.13030925 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 8 0.816 1 1 1 76.694 76.694 3 1.9263E-08 27052 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.389 7.7616 48.905 85.322 45.254 137.88 80.484 0 46 84 46 130 83 0 1 2 1 2 2 0 17068 20331 2555 19573 47037;47038;47039 54459;54460;54461 54459 3 VAIQLNDTHPSLAIPELMR Unmodified 2117.1303 0.13030925 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 7 0 1 76.728 76.728 4 0.0081554 27093 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.017 0 9.3998 28.844 18.78 0 47.467 18.9 9 28 19 0 46 19 1 1 1 0 1 1 2386.6 20332 3331 19574 47040 54462 54462 1 VAIVKPGVPMEIVLNK Unmodified 1706.0164 0.016448693 3234 Q9JKR6;A0A1L1SQ34;E0CYZ2 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 1 10.5 0.5 1 1 76.897 76.897 3 0.00056487 23622 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.059 57.458 49.063 0 49.525 0 141.28 37.808 46 0 46 0 140 37 1 0 1 0 2 1 10867 20333 3234 19575 47041;47042 54463;54464 54463 2 VALDTLAALLK Unmodified 1126.6962 0.69616041 840 E9PX07;F6ZCF0;Q641K1 Agtpbp1 Cytosolic carboxypeptidase 1 yes no 0 0 0 0 11.5 0.5 1 1 97.23 97.23 2;3 0.0037017 31816 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.028 25.581 29.875 0 28.419 38.747 0 0 28 0 28 37 0 0 1 0 1 1 0 0 1007.7 20334 840 19576 47043;47044 54465;54466 54465 2 VALEEVER Unmodified 943.49746 0.4974606 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 3 0 1 49.77 49.77 2 0.027739 16603 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 73.665 21.262 29.904 27.776 0 30.604 0 59.696 28 28 0 28 0 56 1 1 0 1 0 1 2725.7 20335 3266 19577 47045 54467 54467 1 VALEIFQHNK Unmodified 1197.6506 0.6506072 3231 Q9JKF7 Mrpl39 39S ribosomal protein L39, mitochondrial yes yes 0 0 0 0 9 0 1 61.952 61.952 3 7.6552E-06 18823 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.68 89.117 0 29.792 0 69.68 72.59 46.965 0 28 0 65 74 46 0 1 0 1 1 1 3908.1 20336 3231 19578 47046 54468 54468 1 VALHWQQLMLK Unmodified 1365.7591 0.75911179 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560 Kalrn Kalirin yes no 0 0 0 0 12 0 1 72.218 72.218 3 0.00026146 18653 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.258 60.66 49.225 26.473 0 0 36.688 58.649 46 28 0 0 37 56 1 1 0 0 1 1 4615.9 20337 545 19579 47047 54469 54469 1 VALIGSPVDLTYR Unmodified 1402.782 0.78201531 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 74.691 74.691 2;3 4.7814E-33 22592 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 185.18 147.62 227.56 105.73 293.49 197.04 60.574 214.67 214 107 283 191 65 203 4 3 4 4 1 3 96120 20338 2736 19580 47048;47049;47050;47051;47052 54470;54471;54472;54473;54474;54475 54473 6 VALLLLDQGASPHAAAK Unmodified 1673.9465 0.94645487 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812 Ank3 Ankyrin-3 yes no 0 0 0 0 10.5 0.5 1 1 69.447 69.447 4 5.634E-06 19700 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.497 69.558 69.42 103.42 25.836 138.4 56.386 0 65 102 28 129 56 0 1 2 1 2 1 0 11891 20339 3450 19581 47053;47054 54476;54477 54477 2 VALLLLEK Unmodified 897.5899 0.58990443 3449;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 11 0.816 1 1 1 82.894 82.894 2 0.003264 25919 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 124.08 33.038 158.12 59.484 500.73 650.57 27.906 163.1 148 60 486 623 28 153 3 1 2 4 1 2 96665 20340 3449;3452 19582 47055;47056;47057 54478;54479;54480;54481 54479 4 VALLVTR Unmodified 770.50142 0.50142377 2574 Q8K010;E9Q484;A0A1B0GSQ4 Oplah 5-oxoprolinase yes no 0 0 0 0 11 0 1 57.239 57.239 2 0.026957 14490 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.369 36.206 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14492 20341 2574 19583 47058 54482 54482 1 VALPDGTTVTVR Unmodified 1227.6823 0.68230126 1979 Q3UHD6;A0A0G2JF85 Snx27 Sorting nexin-27 yes no 0 0 0 0 7 0 1 60.138 60.138 2 0.016007 19351 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.584 16.345 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20342 1979 19584 47059 54483 54483 1 VALQAEK Unmodified 757.4334 0.43340378 1699 P61458;A0A1W2P7A4 Pcbd1 Pterin-4-alpha-carbinolamine dehydratase no no 0 0 0 0 6.5 0.5 1 1 46.567 46.567 2 0.02936 12934 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.794 10.94 63.652 58.329 72.929 74.495 108.5 0 60 60 74 74 107 0 1 1 1 1 1 0 7214.3 20343 1699 19585 47060;47061 54484;54485 54485 2 VALSAVDTISCGEFQFPPK Unmodified 2065.019 0.019027468 3132 Q9DBS2 Tprg1l Tumor protein p63-regulated gene 1-like protein yes yes 0 0 0 0 7 0 1 85.095 85.095 3 0.024637 31048 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.514 15.392 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20344 3132 19586 47062 54486 54486 1 VALSNMNVIDR Unmodified 1230.6391 0.63905624 1899 Q11011;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 13 0 1 60.693 60.693 2 0.022223 21519 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.721 30.845 78.632 0 129.44 0 112.15 115.13 74 0 120 0 111 111 1 0 1 0 1 1 7405.4 20345 1899 19587 47063 54487 54487 1 VALSPAGVQALVK Unmodified 1251.7551 0.75507227 2142 Q61941;E9Q8F4;Q8C9V5;Q8BGK0 Nnt NAD(P) transhydrogenase, mitochondrial yes no 0 0 0 0 11 0 1 72.19 72.19 3 0.024452 21084 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.475 19.635 39.117 35.594 67.997 0 0 49.036 37 37 65 0 0 46 1 1 1 0 0 1 2694.8 20346 2142 19588 47064 54488 54488 1 VALTGLTVAEYFR Unmodified 1438.782 0.78201531 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.78 3.42 1 2 2 1 1 2 83.737 83.737 2;3 3.3795E-60 26626 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 208.33 170.64 664.65 733.06 460.33 379.73 499.74 831.01 624 738 459 374 499 788 6 9 6 7 7 6 1109900 20347 1642 19589 47065;47066;47067;47068;47069;47070;47071;47072;47073 54489;54490;54491;54492;54493;54494;54495;54496;54497;54498;54499;54500;54501 54493 13 VALTGLTVAEYFRDQEGQDVLLFIDNIFR Unmodified 3341.7296 0.72959239 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 13 0 1 118 118 4 0.0018806 45175 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 36.483 26.6 6.408 5.9519 0 0 0 0 6 6 0 0 0 0 1 1 0 0 0 0 987.09 20348 1642 19590 47074 54502 54502 1 VALVTFNSAAHNKPSLIR Unmodified 1937.0847 0.084679688 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 1 0 1 61.177 61.177 4 5.8786E-07 20259 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.005 71.975 59.408 72.87 111.25 93.926 0 88.478 56 74 111 92 0 83 1 2 2 2 0 2 24883 20349 2264 19591 47075 54503;54504 54504 2 VALVTFNSAAHNKPSLIR Deamidation (N) 1938.0687 0.068695273 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 1 0 1 11 0 1 62.314 62.314 4 0.00042741 16644 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.288 35.557 118.6 100.53 0 149.32 138.53 0 111 102 0 139 139 0 1 1 0 1 1 0 13694 20350 2264 19591 47076 54505 54505 896 1 VALVTGANK Unmodified 871.51272 0.51271674 2604 Q8K354;A0A338P797 Cbr3 Carbonyl reductase [NADPH] 3 yes no 0 0 0 0 10 0.816 1 1 1 52.375 52.375 2 3.5323E-05 12632 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.83 70.578 137.51 112.56 248.08 184.62 207.6 163.11 129 111 241 185 204 157 2 2 2 2 2 2 22378 20351 2604 19592 47077;47078;47079 54506;54507;54508 54507 3 VALVYGQMNEPPGAR Unmodified 1600.8032 0.80316145 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 10.3 1.97 1 2 1 2 61.408 61.408 2;3 1.4977E-35 21648 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 171.62 118.83 370.95 210.56 354.32 323.79 513.06 508.77 348 214 342 316 519 491 6 4 4 6 6 6 160000 20352 1642 19593 47080;47081;47082;47083;47084;47085 54509;54510;54511;54512;54513;54514;54515;54516 54515 8 VAMNVYELSSAAGLPCEIDPALVVALSSQK Unmodified 3131.5883 0.58827281 513 A2AS98;P28660 Nckap1 Nck-associated protein 1 yes no 0 0 0 0 8 0 1 102.61 102.61 4 7.2612E-13 36098 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.294 59.018 22.444 0 15.035 0 9.0934 9.3345 21 0 14 0 9 9 1 0 1 0 1 1 1257.7 20353 513 19594 47086 54517 54517 1 VAMQDATAQMAMLQFISSGLPK Unmodified 2337.1531 0.15309488 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 11.3 1.39 1 1 2 1 2 99.837 99.837 3;4 2.4282E-28 32614 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.09 106.89 95.242 49.777 91.576 31.086 106.68 171.25 89 51 86 29 106 162 3 5 4 2 5 5 91311 20354 2843 19595 47087;47088;47089;47090;47091;47092;47093 54518;54519;54520;54521;54522;54523;54524;54525;54526;54527;54528;54529 54522 12 VAMQDATAQMAMLQFISSGLPK Oxidation (M) 2353.148 0.14800951 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 1 0 11 0 1 94.807 94.807 4 0.0028619 30744 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.521 27.689 20.233 7.8914 19.157 18.532 0 0 19 9 19 18 0 0 1 1 1 1 0 0 1279.8 20355 2843 19595 47094 54530 54530 185;186 1 VAMSHFEPSEYIR Unmodified 1564.7344 0.73441319 2843 Q99KI0;A0A2R8VHM8 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 7.75 3.11 1 1 1 1 58.513 58.513 3 1.1252E-15 18562 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.38 108.41 147.22 194.91 215.29 102.11 177.1 166.39 139 195 213 103 176 158 3 3 3 2 3 2 91120 20356 2843 19596 47095;47096;47097;47098 54531;54532;54533;54534 54533 4 VANEAEFILNR Unmodified 1274.6619 0.66190017 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 5 0 2 65.946 65.946 2;3 0.0052298 23431 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.486 48.224 39.234 35.206 56.245 57.856 0 69.29 37 37 56 56 0 65 1 2 1 1 0 1 5383.3 20357 3165 19597 47099;47100 54535;54536 54536 2 VANLLLCMYAK Unmodified 1294.6777 0.67774993 670 D3YTS4;Q9JHS3 Lamtor2 Ragulator complex protein LAMTOR2 yes no 0 0 0 0 1 0 1 85.767 85.767 3 0.010994 30412 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.5 21.879 0 0 70.33 0 0 29.848 0 0 65 0 0 28 0 0 1 0 0 1 2502.3 20358 670 19598 47101 54537 54537 1 VANSGITR Unmodified 816.44537 0.44536545 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 6 0 1 32.804 32.804 2 0.02409 7235 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.825 20.321 59.513 114.09 0 69.827 64.782 0 56 111 0 65 65 0 1 1 0 1 1 0 11702 20359 1824 19599 47102 54538 54538 1 VANVELYYK Unmodified 1097.5757 0.57571092 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 63.224 63.224 2;3 0.00016905 20792 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 131.5 82.407 588.31 651.81 643.79 658.77 371.83 659.9 553 660 645 637 387 629 3 5 4 4 2 4 135700 20360 2185 19600 47103;47104;47105;47106;47107 54539;54540;54541;54542;54543 54540 5 VANVSLLALYK Unmodified 1189.7071 0.70705945 1717 P62267 Rps23 40S ribosomal protein S23 yes yes 0 0 0 0 11.8 0.829 2 1 1 78.434 78.434 2;3 1.7125E-13 21151 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 152.07 95.657 20.125 50.457 167.62 123.15 86.623 79.61 19 50 165 120 87 77 1 2 4 2 2 2 52174 20361 1717 19601 47108;47109;47110;47111 54544;54545;54546;54547 54546 4 VAPAPAGVFTDIPISNIR Unmodified 1837.0098 0.0097834104 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 79.33 79.33 2;3 3.9695E-53 27654 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 162.79 135.14 199.32 143.62 186.45 224.18 213.18 234.02 187 140 186 213 213 221 6 4 5 4 5 4 146770 20362 2433 19602 47112;47113;47114;47115;47116 54548;54549;54550;54551;54552;54553;54554;54555 54552 8 VAPEEHPTLLTEAPLNPK Unmodified 1955.0364 0.036392091 1791 P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3;A0A0U1RQ96 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 0 0 5 0 2 62.034 62.034 3;4 3.5032E-07 21681 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.007 80.594 0 98.253 62.343 46.954 62.856 86.684 0 93 65 46 65 83 0 1 2 1 2 2 7872.4 20363 1791 19603 47117;47118 54556;54557 54557 2 VAPEEHPVLLTEAPLNPK Unmodified 1953.0571 0.057127534 1673;1781 P60710;E9Q5F4;G3UZ07;E9Q606;P63260;G3UYG0 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 0 0 0 6.91 2.84 1 4 2 1 1 1 1 63.771 63.771 3;4;5 9.283E-58 22426 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 178.14 51.975 5459.9 4751.1 6142.8 5188.4 5262.4 6825.2 5142 4869 6163 5136 5471 6542 17 18 20 17 21 21 3863800 20364 1673;1781 19604 47119;47120;47121;47122;47123;47124;47125;47126;47127;47128;47129 54558;54559;54560;54561;54562;54563;54564;54565;54566;54567;54568;54569;54570;54571;54572;54573;54574;54575;54576;54577;54578;54579;54580;54581 54560 24 VAPEEHPVLLTEAPLNPK Deamidation (N) 1954.0411 0.041143118 1673;1781 P60710;E9Q5F4;G3UZ07;E9Q606;P63260;G3UYG0 Actb;Actg1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed no no 0 1 0 0 6.8 3.19 1 1 2 1 65.359 65.359 3;4 6.5431E-07 22562 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.285 35.948 187.64 148.86 155.05 172.85 175.48 223.62 176 148 157 167 177 213 4 3 4 4 3 5 31281 20365 1673;1781 19604 47130;47131;47132;47133;47134 54582;54583;54584;54585;54586;54587 54584 645 6 VAPEEVSEVIFGHVLTAGCGQNPTR Unmodified 2666.3122 0.31224938 2518 Q8CAY6;G3XA25;Q80X81;F2Z459 Acat2;Acat3 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 0 8 0 1 82.566 82.566 3 8.7888E-05 29265 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.829 30.215 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3216.9 20366 2518 19605 47135 54588 54588 1 VAPLGAELQESAR Unmodified 1339.7096 0.70957864 1870 Q00623 Apoa1 Apolipoprotein A-I;Proapolipoprotein A-I;Truncated apolipoprotein A-I yes yes 0 0 0 0 9 4 1 1 57.564 57.564 2 0.0097643 19598 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.98 33.4 30.044 0 0 29.351 66.642 0 28 0 0 28 65 0 1 0 0 1 1 0 4304.3 20367 1870 19606 47136;47137 54589;54590 54589 2 VAPPGLTQIPQIQK Unmodified 1488.8664 0.86641364 1369 P14094;A0A0A6YX05 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes no 0 0 0 0 10.3 1.6 1 1 1 2 1 69.9 69.9 3;4 8.2149E-22 20452 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.45 110.17 3093.7 1876.6 2985.9 3053 3001.2 4115.1 2907 1979 2970 3000 3108 3959 8 7 8 8 9 10 1049700 20368 1369 19607 47138;47139;47140;47141;47142;47143 54591;54592;54593;54594;54595;54596;54597;54598;54599;54600;54601;54602 54595 12 VAPPNADLEQEFQDGVPNASVIMQVPER Unmodified 3049.4815 0.48149955 804 E0CYB9;Q6PCP5;F7CTF8;F7B1A4;F6VAL0;E0CYI3 Mff Mitochondrial fission factor yes no 0 0 0 0 4 0 1 84.531 84.531 3 0.008961 32117 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 28.59 21.715 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20369 804 19608 47144 54603 54603 1 VAPSSEER Unmodified 873.41921 0.41921028 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 3 0 1 27.648 27.648 2 0.00096329 6321 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 147.16 78.671 0 78.736 0 59.543 88.516 175.5 0 74 0 56 93 167 0 1 0 1 1 1 12781 20370 3305 19609 47145 54604 54604 1 VAQEHFGK Unmodified 914.46102 0.46101552 2797 Q921I1;E9Q035;D3YY36;Q9DBD0 Tf;Gm20425;1300017J02Rik;Ica Serotransferrin;Inhibitor of carbonic anhydrase yes no 0 0 0 0 6 0 1 39.914 39.914 3 0.0048736 10492 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.378 42.258 0 145.26 157.79 99.888 116.65 124.59 0 139 158 102 120 120 0 1 1 1 1 1 31923 20371 2797 19610 47146 54605 54605 1 VAQFLVIYAPR Unmodified 1275.7339 0.7339429 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 12 0 1 81.002 81.002 2 0.00060472 22170 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.111 54.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3883.9 20372 63 19611 47147 54606 54606 1 VAQGQGEGEVGPEVAL Unmodified 1538.7577 0.75765105 2956 Q9CR61 Ndufb7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 0 5 4.64 2 1 1 67.669 67.669 2;3 3.4517E-07 24450 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.63 98.202 84.399 102.51 39.923 0 42.94 126.96 79 102 38 0 42 120 2 4 2 0 3 4 44087 20373 2956 19612 47148;47149;47150;47151 54607;54608;54609;54610;54611 54607 5 VAQLCDFNPK Unmodified 1190.5754 0.57539335 2197 Q6IRU5 Cltb Clathrin light chain B yes yes 0 0 0 0 9.25 2.28 1 1 1 1 62.244 62.244 2;3 5.525E-05 19654 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.06 64.451 69.323 238.03 258.11 122.42 169.76 280.84 65 231 250 112 167 268 1 3 2 2 1 3 51192 20374 2197 19613 47152;47153;47154;47155 54612;54613;54614;54615 54613 4 VAQLEQVYIR Unmodified 1217.6768 0.67682195 1724 P62320 Snrpd3 Small nuclear ribonucleoprotein Sm D3 yes yes 0 0 0 0 7.5 0.5 1 1 63.805 63.805 2 3.2941E-05 21003 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.96 76.572 93.596 111.04 44.976 102.16 120.94 148.99 88 111 46 98 125 143 2 2 1 2 2 2 9731.1 20375 1724 19614 47156;47157 54616;54617 54616 2 VAQLPLSLK Unmodified 967.60662 0.60661712 869 F7BX42;E9PZM8;Q99J85;H3BLN6;F8VQB8 Nptxr;Npcd Neuronal pentraxin receptor yes no 0 0 0 0 10 1 1 1 69.787 69.787 2;3 0.0059192 22641 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.95 50.016 79.182 43.605 0 0 58.576 46 74 46 0 0 56 46 1 1 0 0 1 1 12329 20376 869 19615 47158;47159 54618;54619 54618 2 VAQTEFDR Unmodified 964.46141 0.46140945 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 7.33 4.03 1 1 1 41.717 41.717 2 0.0019852 12421 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.31 53.253 306.8 0 373.55 372.31 0 316.6 288 0 362 361 0 297 3 0 3 3 0 3 44819 20377 533 19616 47160;47161;47162 54620;54621;54622 54620 3 VAQWLIQEPHK Unmodified 1347.7299 0.72992016 1626 P55264;A0A286YCD7;A0A286YCN3 Adk Adenosine kinase yes no 0 0 0 0 10 0 1 64.186 64.186 3 0.0010448 17754 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.262 32.577 0 58.51 64.264 57.378 0 88.478 0 56 65 56 0 83 0 1 1 1 0 1 7818 20378 1626 19617 47163 54623 54623 1 VASALPGMENVQEK Unmodified 1471.7341 0.73407884 1697 P61294 Rab6b Ras-related protein Rab-6B yes yes 0 0 0 0 6 0 1 62.286 62.286 3 2.1372E-07 21181 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.814 57.861 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20379 1697 19618 47164 54624 54624 1 VASEEEEVPLVVYLK Unmodified 1702.9029 0.9029183 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 9 4 1 1 82.236 82.236 3 2.4946E-11 31319 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 118.37 95.834 79.032 17.423 47.388 76.979 57.349 69.29 74 19 46 74 56 65 2 1 1 2 1 1 8705 20380 894 19619 47165;47166 54625;54626 54625 2 VASGDLQVQR Unmodified 1071.5673 0.5672715 195 G3UYZ1;A0A0R4J117;Q8R366;D3Z4Q8 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 7.2 2.99 2 1 1 1 42.482 42.482 2;3 5.2479E-07 12437 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.63 77.208 345.01 260.11 109.77 372.59 439.31 375.7 323 259 112 352 439 361 4 3 2 5 4 4 53881 20381 195 19620 47167;47168;47169;47170;47171 54627;54628;54629;54630;54631;54632 54632 6 VASIFDDPLNAFGSQ Unmodified 1579.7518 0.75183739 2248 Q6PGL7 Fam21 WASH complex subunit FAM21 yes yes 0 0 0 0 7 0 1 100.04 100.04 2 0.0014002 36486 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.266 43.565 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20382 2248 19621 47172 54633 54633 1 VASLFDSNQICDK Unmodified 1495.6977 0.69769333 2710 Q8VEH5 Epm2aip1 EPM2A-interacting protein 1 yes yes 0 0 0 0 8 0 1 70.058 70.058 3 0.0013484 23375 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.891 38.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20383 2710 19622 47173 54634 54634 1 VASLLVK Unmodified 728.47963 0.47962569 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 11 0 1 64.199 64.199 2 0.01082 17467 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.29 54.299 0 175.9 738.19 0 559.08 472.27 0 169 692 0 550 458 0 1 2 0 1 1 56706 20384 1295 19623 47174 54635;54636 54636 2 VASLLVKR Unmodified 884.58074 0.58073672 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 1 1 0 1 54.775 54.775 3 0.013626 17059 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.255 53.63 48.873 44.923 43.387 77.299 53.027 58.183 46 46 46 74 56 56 1 1 1 1 1 1 2223.1 20385 1295 19624 47175 54637 54637 1 VASLSPAR Unmodified 799.4552 0.45520186 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 11 2 1 1 41.354 41.354 2 0.020126 11931 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.243 28.408 69.296 0 75.452 95.779 73.004 0 65 0 74 93 74 0 1 0 1 1 1 0 3573.4 20386 894 19625 47176;47177 54638;54639 54639 2 VASNPYTWFTMEALEETWR Unmodified 2330.0678 0.067768574 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 9.4 2.06 1 1 1 1 1 99.626 99.626 3 1.6813E-08 35603 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.092 86.244 103.66 11.417 35.073 51.061 64.833 0 98 11 35 49 64 0 5 1 3 4 4 0 39856 20387 551 19626 47178;47179;47180;47181;47182 54640;54641;54642;54643;54644;54645;54646 54642 7 VASSDLVNMGISVVSYTLK Unmodified 1982.0394 0.039428559 1170 O08917;G3UYU4;G3UZZ5;G3UWW8 Flot1 Flotillin-1 yes no 0 0 0 0 10.5 0.5 1 1 98.98 98.98 3 4.1472E-11 32317 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 115.34 94.972 0 0 0 0 23.056 29.19 0 0 0 0 23 28 0 0 0 0 1 1 10919 20388 1170 19627 47183;47184 54647;54648 54647 2 VASSVPVENFTIHGGLSR Unmodified 1868.9745 0.97446054 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 7 1 1 1 60.82 60.82 3 2.13E-07 18935 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.062 91.925 59.319 63.905 75.102 18.695 61.228 19.611 56 65 74 19 60 19 2 2 2 1 2 1 12570 20389 2074 19628 47185;47186 54649;54650 54650 2 VASVYESPGFFLNLEPIPGALDALR Unmodified 2674.4007 0.40065368 3246 Q9JM14;A2A9X5 Nt5c 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 0 8 0.816 2 2 2 103 103 3;4 7.7652E-23 36147 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.976 77.549 13.803 28.903 29.526 6.558 14.393 22.244 13 28 28 6 14 21 2 4 2 1 2 2 14272 20390 3246 19629 47187;47188;47189;47190;47191;47192 54651;54652;54653;54654;54655;54656;54657 54654 7 VATAQDDITGDGTTSNVLIIGELLK Unmodified 2543.333 0.33302762 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 6.5 0.5 1 1 93.643 93.643 3 3.8018E-20 35415 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.992 61.118 24.679 0 0 9.5758 23.302 9.1977 23 0 0 9 23 9 2 0 0 1 2 1 6012.4 20391 1826 19630 47193;47194 54658;54659 54658 2 VATHLSTPQGLQFK Unmodified 1525.8253 0.8252771 2479 Q8BYI9;A0A0A6YWD9 Tnr Tenascin-R yes no 0 0 0 0 9.86 1.25 1 2 2 1 1 57.583 57.583 3;4 6.9826E-22 14516 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 139.19 109.7 1420.5 352.59 1598.6 512.69 1440.4 1841.5 1334 356 1510 498 1430 1766 4 3 3 3 4 6 142180 20392 2479 19631 47195;47196;47197;47198;47199;47200;47201 54660;54661;54662;54663;54664;54665;54666 54665 7 VATLAEGK Unmodified 787.44397 0.44396847 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 0 7 0 1 49.956 49.956 3 0.020083 14437 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.968 17.411 0 68.249 54.471 45.475 82.76 57.334 0 65 56 46 83 56 0 1 1 1 1 1 3350.6 20393 3453 19632 47202 54667 54667 1 VATLEQSYEALCELAATR Unmodified 2023.9885 0.98845562 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 6 0 1 89.83 89.83 3 4.7457E-27 33938 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.26 126.41 0 9.3501 13.514 24.092 12.854 19.887 0 9 14 23 14 19 0 1 1 1 1 1 5293.6 20394 2186 19633 47203 54668 54668 1 VATNPNFDGK Unmodified 1061.5142 0.5141733 2398 Q8BH66 Atl1 Atlastin-1 yes yes 0 0 0 0 6.5 0.5 1 1 49.04 49.04 2 0.0011218 14047 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.538 45.457 69.34 36.752 36.908 47.597 83.709 57.307 65 37 37 47 84 56 2 1 1 2 2 2 5036.2 20395 2398 19634 47204;47205 54669;54670 54670 2 VATSAASGGHGSPLR Unmodified 1366.6953 0.69532556 461 A2AG50;A2AG51 Map7d2 MAP7 domain-containing protein 2 yes no 0 0 0 0 6 0 1 33.597 33.597 3 0.0068512 7661 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.958 25.591 39.701 0 0 51.371 0 29.848 37 0 0 47 0 28 1 0 0 1 0 1 1633.3 20396 461 19635 47206 54671 54671 1 VATVLASVK Unmodified 886.54877 0.54876789 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 11 0.816 1 1 1 65.164 65.164 2;3 0.0008403 17770 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.308 41.59 0 88.312 0 0 116.11 0 0 83 0 0 111 0 0 1 0 0 1 0 13384 20397 2226 19636 47207;47208;47209 54672;54673;54674 54673 3 VATVSLPR Unmodified 841.50215 0.50215205 650 CON__P00761 yes yes 0 0 0 0 7.6 3.88 1 1 1 1 1 50.511 50.511 2 2.4207E-06 13349 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.67 71.202 4557.6 4596.7 4854.1 3620.5 4701 6748 4269 4647 4817 3658 4777 6450 5 5 6 6 4 5 1504800 + 20398 650 19637 47210;47211;47212;47213;47214 54675;54676;54677;54678;54679;54680;54681 54679 7 VAVCDIPPR Unmodified 1025.5328 0.53280025 3183;2805;647 CON__ENSEMBL:ENSBTAP00000025008;A2AQ07;Q922F4;Q9ERD7 Tubb1;Tubb6;Tubb3 Tubulin beta-1 chain;Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 8.89 3.73 3 1 1 4 49.582 49.582 2 0.00092483 15043 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 110.81 58.124 1127.1 714.36 1077.7 1081.7 1696.6 1232.5 1057 718 1055 1059 1704 1189 12 9 11 13 15 13 29790 + 20399 647;2805;3183 19638 47215;47216;47217;47218;47219;47220;47221;47222;47223 54682;54683;54684;54685;54686;54687;54688;54689;54690;54691;54692;54693;54694;54695;54696;54697;54698;54699;54700;54701;54702;54703 54687 22 VAVEEVDEEGK Unmodified 1202.5667 0.56666238 1580 P48678 Lmna Prelamin-A/C;Lamin-A/C yes yes 0 0 0 0 3 0 2 51.678 51.678 2;3 6.5083E-10 17499 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.53 61.159 99.019 70.901 69.267 135.76 117.02 65.951 93 74 74 130 120 65 1 1 1 1 1 1 9543.2 20400 1580 19639 47224;47225 54704;54705 54705 2 VAVEYLDPSPEVQK Unmodified 1572.8035 0.80353861 234 A0A140LHA2;Q9WVA3;A0A140LIM5 Bub3 Mitotic checkpoint protein BUB3 yes no 0 0 0 0 6 0 1 67.443 67.443 3 8.8329E-05 23537 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.879 47.587 29.807 46.934 0 49.237 55.343 28.269 28 46 0 46 56 28 1 1 0 1 1 1 2382.4 20401 234 19640 47226 54706 54706 1 VAVFGAGGVGK Unmodified 960.53927 0.53926584 2055 Q5PR73 Diras2 GTP-binding protein Di-Ras2 yes yes 0 0 0 0 11 0.816 1 1 1 60.442 60.442 2 3.8231E-14 16303 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 159.04 77.743 99.215 0 179.45 82.406 136.32 153.88 93 0 176 83 139 148 1 0 2 1 1 1 28994 20402 2055 19641 47227;47228;47229 54707;54708;54709 54707 3 VAVGSDADLVIWNPR Unmodified 1610.8417 0.84165545 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 8.5 2.69 1 1 1 1 74.538 74.538 3 1.4434E-11 28135 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.24 89.411 29.865 88.422 87.22 40.441 103.7 156.44 28 84 84 37 102 149 1 3 3 1 3 3 20689 20403 207 19642 47230;47231;47232;47233 54710;54711;54712;54713 54713 4 VAVLFTR Unmodified 804.48577 0.48577371 1903 Q14BI2;A0A0J9YVF0 Grm2 Metabotropic glutamate receptor 2 yes no 0 0 0 0 12 0 1 62.485 62.485 2 0.048917 15034 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.833 45.775 78.52 71.984 87.206 195.42 84.65 106.32 74 74 93 185 93 102 1 1 1 1 1 1 22011 20404 1903 19643 47234 54714 54714 1 VAVLGASGGIGQPLSLLLK Unmodified 1792.0822 0.082220072 1327 P08249;A0A0G2JGY4 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 6.82 5.51 8 2 5 2 96.016 96.016 3;4 2.9883E-63 33552 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 181.72 161.88 2565 2436.6 2992.7 2356.9 2682.2 3015.6 2413 2479 2997 2362 2730 2897 22 25 26 28 20 24 1371800 20405 1327 19644 47235;47236;47237;47238;47239;47240;47241;47242;47243;47244;47245;47246;47247;47248;47249;47250;47251 54715;54716;54717;54718;54719;54720;54721;54722;54723;54724;54725;54726;54727;54728;54729;54730;54731;54732;54733;54734;54735;54736;54737;54738;54739;54740;54741;54742;54743;54744;54745;54746;54747;54748;54749;54750;54751;54752;54753;54754;54755 54723 41 VAVLSQNR Unmodified 885.50321 0.50321468 2518 Q8CAY6;G3XA25;Q80X81;F2Z459 Acat2;Acat3 Acetyl-CoA acetyltransferase, cytosolic yes no 0 0 0 0 8 0 1 43.282 43.282 2 0.0089148 10740 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.19 37.504 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20406 2518 19645 47252 54756 54756 1 VAVPSTIHCDHLIEAQVGGEK Unmodified 2259.1318 0.13176581 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 6.86 3.44 1 1 2 1 1 1 56.776 56.776 4;5 8.9489E-14 18619 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.56 90.185 573.61 457.78 437.71 413.62 543.77 481.35 539 464 436 408 550 463 7 5 5 6 5 6 89389 20407 2843 19646 47253;47254;47255;47256;47257;47258;47259 54757;54758;54759;54760;54761;54762;54763;54764 54760 8 VAVSADPNVPNVIVTR Unmodified 1649.9101 0.91006937 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 63.949 63.949 3 7.0707E-08 22903 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.43 83.571 256.99 261.72 96.606 230.26 260.95 161.86 241 263 92 213 260 157 4 4 2 3 4 3 152250 20408 2889 19647 47260;47261;47262;47263 54765;54766;54767;54768;54769 54769 5 VAVTPPGLAR Unmodified 979.58147 0.581465 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 52.578 52.578 2 1.4761E-05 15081 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 129.72 68.716 445.7 418.31 356.9 88.413 0 424.27 419 427 349 84 0 398 4 5 3 2 0 4 73270 20409 2736 19648 47264;47265;47266;47267 54770;54771;54772;54773;54774 54771 5 VAVTWLNR Unmodified 957.5396 0.53960019 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 11 0.816 1 1 1 61.948 61.948 2 4.1341E-16 16380 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 181.81 125 443.27 241.86 204.13 494.6 136.59 665.55 415 246 195 466 139 628 2 1 2 3 1 3 85908 20410 2322 19649 47268;47269;47270 54775;54776;54777 54776 3 VAVVAGYGDVGK Unmodified 1133.6081 0.60807369 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 7.5 0.5 1 1 59.664 59.664 3 0.00053906 19144 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.395 40.009 78.53 102.23 59.977 85.818 70.492 86.466 74 102 65 83 74 83 1 1 1 1 1 1 5734.6 20411 1594 19650 47271;47272 54778;54779 54778 2 VAVVNQIAR Unmodified 968.57671 0.57671398 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 10.7 1.7 1 1 1 49.935 49.935 2 9.3346E-06 13126 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.39 58.128 446.87 371.83 140.84 432.38 223.97 434.93 419 380 148 406 232 414 3 3 1 2 2 3 133720 20412 2148 19651 47273;47274;47275 54780;54781;54782 54780 3 VAWIPDVESR Unmodified 1170.6033 0.60332266 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 7 0 1 68.816 68.816 2 0.00081231 23400 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.309 50.54 48.384 83.495 92.993 53.419 119.45 105.32 46 83 93 56 120 102 1 1 1 1 1 1 9803.3 20413 1882 19652 47276 54783 54783 1 VCALGESK Unmodified 862.42185 0.42185282 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8.75 2.49 2 1 1 47.004 47.004 2;3 0.0033948 13237 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.229 30.416 441.97 354.38 438.21 419.92 518.13 432.94 416 361 444 417 528 416 4 3 4 4 4 3 39558 20414 1263 19653 47277;47278;47279;47280 54784;54785;54786;54787 54785 4 VCALMSCAK Unmodified 1038.466 0.4660426 1548 P45376 Akr1b1 Aldose reductase yes yes 0 0 0 0 9.5 0.5 1 1 57.694 57.694 2 0.00089604 14976 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.95 71.902 49.358 0 0 0 0 59.696 46 0 0 0 0 56 1 0 0 0 0 1 5388.7 20415 1548 19654 47281;47282 54788;54789 54789 2 VCAYPEK Unmodified 865.40039 0.4003891 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 6 0 1 45.07 45.07 2 0.04575 13033 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.674 36.172 0 58.672 54.535 56.943 53.963 58.156 0 56 56 56 56 56 0 1 1 1 1 1 3708.7 20416 2537 19655 47283 54790 54790 1 VCEDFGVIATFDPK Unmodified 1596.7494 0.74939455 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 0 7.75 3.11 1 1 1 1 81.024 81.024 3 3.1304E-07 29146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.65 87.219 336.56 243.31 155.94 389.1 378.13 213.91 315 241 157 371 382 204 4 3 3 5 4 3 53815 20417 1383 19656 47284;47285;47286;47287 54791;54792;54793;54794;54795 54794 5 VCEDFGVIATFDPKPIPGNWNGAGCHTNFSTK Unmodified 3535.6289 0.62890884 1383 P15105 Glul Glutamine synthetase yes yes 0 0 0 1 6 0 1 80.581 80.581 5 0.00014454 29634 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.764 35.708 0 39.368 0 0 37.384 38.375 0 37 0 0 37 37 0 1 0 0 1 1 3722 20418 1383 19657 47288 54796 54796 1 VCEEIAIIPSK Unmodified 1257.6639 0.663874 1782 P63276 Rps17 40S ribosomal protein S17 yes yes 0 0 0 0 6 0 1 68.136 68.136 3 0.061998 23836 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.645 15.316 0 48.351 35.473 37.257 56.865 0 0 46 37 37 56 0 0 1 1 1 1 0 2931.5 20419 1782 19658 47289 54797 54797 1 VCEHLNLLEK Unmodified 1253.6438 0.64380726 1250;3345 Q80UE5;O70318;Q80UE4;A0A1W2P6I5;Q9WV92;A7YY80;A0A286YCY8;A0A286YDD0 Epb4.1l2;Epb41l2;Epb41l3;Epb4.1l3 Band 4.1-like protein 2;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 10 3 1 1 57.582 57.582 3 0.00015199 19467 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.397 57.66 78.215 101.35 113.63 0 116.11 0 74 102 111 0 111 0 1 1 1 0 1 0 19887 20420 1250;3345 19659 47290;47291 54798;54799 54799 2 VCENIPIVLCGNK Unmodified 1514.7585 0.75851945 1744 P62827;Q14AA6;Q61820 Ran;1700009N14Rik;Rasl2-9 GTP-binding nuclear protein Ran;GTP-binding nuclear protein Ran, testis-specific isoform yes no 0 0 0 0 9.17 2.79 1 1 2 2 69.104 69.104 2;3;4 0.00014182 22937 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.659 51.408 315.67 166.2 219.04 335.35 304.43 172.21 296 166 213 324 306 166 4 3 2 4 3 3 55916 20421 1744 19660 47292;47293;47294;47295;47296;47297 54800;54801;54802;54803;54804;54805 54802 6 VCFYSNSFNPGK Unmodified 1418.6289 0.62888548 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 10 0 1 64.743 64.743 2 0.00017436 18057 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.556 59.884 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20422 3261 19661 47298 54806 54806 1 VCGSNLLSICK Unmodified 1249.6159 0.61587795 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 9.25 3.46 1 1 1 2 1 1 1 64.966 64.966 2;3 9.7638E-17 23384 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 169.37 124.93 519.07 781.48 534.67 597.28 1412.2 1254.9 488 768 538 596 1404 1215 5 7 6 8 7 8 482680 20423 1666 19662 47299;47300;47301;47302;47303;47304;47305;47306 54807;54808;54809;54810;54811;54812;54813;54814;54815;54816 54816 10 VCGSNLLSICK Deamidation (N) 1250.5999 0.59989354 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 1 0 0 7 0 1 67.5 67.5 2 0.043558 22790 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.509 48.394 20.244 28.427 0 0 38.702 0 19 28 0 0 37 0 1 1 0 0 1 0 1771.5 20424 1666 19662 47307 54817 54817 639 1 VCGTLLEYLGK Unmodified 1251.6533 0.65330932 939 E9Q9B3 Spryd3 yes yes 0 0 0 0 10 0 1 81.99 81.99 3 0.0041696 25969 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.094 32.108 29.807 46.934 0 9.837 0 0 28 46 0 9 0 0 1 1 0 1 0 0 1481.1 20425 939 19663 47308 54818 54818 1 VCHAHPTLSEAFR Unmodified 1523.7303 0.73033086 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 40.958 40.958 4 0.00022702 10193 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.554 54.121 119.29 109.11 57.016 77.484 0 49.036 112 111 56 74 0 46 2 2 1 2 0 1 8260.5 20426 1164 19664 47309;47310 54819;54820 54820 2 VCHCLGK Unmodified 872.39968 0.39967759 1666 P60202 Plp1 Myelin proteolipid protein yes yes 0 0 0 0 8 0 1 36.772 36.772 3 0.013151 7847 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.021 55.867 197.58 220.41 148.34 188.41 263.44 239.79 186 222 158 185 268 232 2 2 2 2 2 2 30261 20427 1666 19665 47311 54821;54822 54822 2 VCIVGSGNWGSAVAK Unmodified 1503.7504 0.7503976 1994 Q3ULJ0 Gpd1l Glycerol-3-phosphate dehydrogenase 1-like protein yes yes 0 0 0 0 7.67 4.78 1 1 1 67.159 67.159 3 1.8929E-16 22649 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.54 73.813 0 118.1 0 79.006 99.756 96.291 0 111 0 74 102 93 0 1 0 1 1 1 13037 20428 1994 19666 47312;47313;47314 54823;54824;54825 54823 3 VCLLGCGISTGYGAAVNTAK Unmodified 2010.9867 0.98668148 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 8.75 4.6 1 1 1 1 72.403 72.403 3 1.0147E-11 21685 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.5 88.012 78.71 75.757 120.92 161.67 145.04 105.66 74 75 121 157 148 101 2 3 3 4 3 3 49823 20429 1474 19667 47315;47316;47317;47318 54826;54827;54828;54829 54827 4 VCLLGDTGVGK Unmodified 1117.5801 0.58014438 511 A2ARZ7;Q3TXV4;Q921E2;P35285;D6RFT6 Rab22a;Rab31 Ras-related protein Rab-31;Ras-related protein Rab-22A yes no 0 0 0 0 8 0 1 64.286 64.286 3 0.013103 20571 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.284 24.195 59.466 43.807 67.402 0 56.581 58.081 56 46 65 0 56 56 1 1 1 0 1 1 2895.4 20430 511 19668 47319 54830 54830 1 VCLLHEK Unmodified 897.47422 0.47422274 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 46.58 46.58 3 0.0044505 14277 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.92 35.497 919.92 1243.4 1050.8 501.48 1156 543.45 869 1237 1065 536 1145 528 5 4 5 5 5 3 174660 20431 1321 19669 47320;47321;47322;47323;47324 54831;54832;54833;54834;54835 54835 5 VCMDLNDTVPEYK Unmodified 1582.7007 0.7007298 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 5.5 0.5 1 1 67.868 67.868 3 8.6539E-05 23693 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.362 57.043 108.64 103.21 47.556 134.8 178.95 0 102 102 46 129 177 0 3 2 1 3 3 0 9907.3 20432 3307 19670 47325;47326 54836;54837;54838 54838 3 VCMVYDLYPTLTPLAVAYAR Unmodified 2315.1694 0.16939687 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 10 0 1 95.393 95.393 3 1.1694E-22 31168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 100.77 90.115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20433 2977 19671 47327 54839 54839 1 VCMYFTYK Unmodified 1110.4878 0.48782389 7 A0A087WQE6;A0A087WNT1;P83940 Tceb1 Transcription elongation factor B polypeptide 1 yes no 0 0 0 0 11 0 1 68.512 68.512 2 0.0087661 19391 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.99 69.768 0 0 0 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 13892 20434 7 19672 47328 54840 54840 1 VCNLIDSGTK Unmodified 1105.5438 0.54375887 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 10 3 1 1 57.478 57.478 2;3 1.2922E-13 19570 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 137.46 94.545 87.957 100.93 99.7 93.495 117.61 105.38 83 102 102 93 120 102 1 1 1 1 1 1 6233.4 20435 3170 19673 47329;47330 54841;54842 54842 2 VCNPIITK Unmodified 943.51609 0.51608756 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 0 10.9 1.81 1 1 1 1 1 2 54.707 54.707 2;3 0.0037439 18391 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.62 56.367 1890.4 1417.2 1374.5 1872 1627.8 1350.6 1776 1457 1385 1813 1664 1305 8 6 6 8 7 5 609110 20436 1762 19674 47331;47332;47333;47334;47335;47336;47337 54843;54844;54845;54846;54847;54848;54849;54850;54851;54852 54851 10 VCNYGLTFTQK Unmodified 1329.6387 0.63872189 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 9.5 0.5 1 1 63.72 63.72 3 4.9408E-06 19673 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.21 56.016 382.97 267.65 329.55 359.53 121.68 0 360 281 336 349 120 0 2 2 2 2 1 0 52335 20437 1141 19675 47338;47339 54853;54854 54853 2 VCNYVNWIQQTIAAN Unmodified 1792.8567 0.85665359 650 CON__P00761 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 96.482 96.482 2;3 0.00036866 31658 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.092 43.535 25.63 14.832 55.453 20.229 43.443 14.251 24 14 53 19 42 14 2 1 5 2 3 1 27723 + 20438 650 19676 47340;47341;47342;47343 54855;54856;54857;54858;54859;54860;54861 54856 7 VCPLPTTEDPGLPFHPNGK Deamidation (N) 2075.9986 0.99862638 985 F6RJV6;Q9JJK2 Lancl2 LanC-like protein 2 yes no 0 1 0 0 6 0 1 68.278 68.278 3 2.6774E-05 23948 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.335 51.722 39.516 36.703 0 29.725 46.751 0 37 37 0 28 46 0 1 1 0 1 1 0 3372.1 20439 985 19677 47344 54862 54862 262 1 VCTLAIIDPGDSDIIR Unmodified 1756.9029 0.90293508 382 A0A2I3BQF4;P62889 Rpl30 60S ribosomal protein L30 yes no 0 0 0 0 6.5 0.5 1 1 79.418 79.418 3 0.0047907 29318 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.947 21.074 87.958 110.65 91.22 27.887 0 59.696 83 111 92 28 0 56 2 2 2 1 0 1 9378.7 20440 382 19678 47345;47346 54863;54864 54863 2 VCTQLQVLTEAFR Unmodified 1563.8079 0.80791248 2364 Q8BFY6 Pef1 Peflin yes yes 0 0 0 0 9 0 1 80.811 80.811 3 0.002363 27758 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.3 18.545 39.516 36.703 0 20.442 17.268 48.543 37 37 0 19 19 46 1 1 0 1 1 1 5980.9 20441 2364 19679 47347 54865 54865 1 VCVSLLGTWIGK Unmodified 1331.7271 0.72714296 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 12 0 1 86.597 86.597 2 5.3719E-12 24307 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 123.63 79.422 0 0 38.774 49.06 0 39.442 0 0 37 47 0 37 0 0 1 2 0 2 2231.7 20442 2262 19680 47348 54866;54867 54867 2 VDAILCVAGGWAGGNAK Unmodified 1657.8246 0.82462518 2464 Q8BVI4;D3YWR7;A0A0G2JGJ1;D3Z099;D3Z1A1 Qdpr Dihydropteridine reductase yes no 0 0 0 0 9.43 3.66 1 1 2 1 1 1 84.364 84.364 3;4 1.8987E-06 26372 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.39 78.78 189.68 125.8 112.97 28.17 197.64 313.4 177 121 112 28 194 297 5 2 3 1 4 6 110290 20443 2464 19681 47349;47350;47351;47352;47353;47354;47355 54868;54869;54870;54871;54872;54873;54874;54875;54876 54874 9 VDAKPEVQSQPPR Unmodified 1449.7576 0.75759147 1847 P97379 G3bp2 Ras GTPase-activating protein-binding protein 2 yes yes 0 0 0 1 8 3.56 1 1 1 40.479 40.479 3 0.00012791 11010 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 97.69 59.721 206.89 162.47 75.907 30.604 86.818 0 194 167 74 28 83 0 3 3 1 1 1 0 17150 20444 1847 19682 47356;47357;47358 54877;54878;54879 54878 3 VDASDEDRISEVR Unmodified 1489.7009 0.70086445 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 1 1 0 1 42.823 42.823 3 1.1128E-10 12038 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 116.19 87.203 33.955 26.812 41.32 52.629 34.634 48.048 32 28 42 51 37 46 1 1 1 1 1 1 13921 20445 927 19683 47359 54880 54880 1 VDASGELEDVEWEDWE Unmodified 1906.7745 0.7744829 2337 Q80Y55 Bsdc1 BSD domain-containing protein 1 yes yes 0 0 0 0 2 0 1 91.242 91.242 3 0.00046454 29491 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 58.626 53.253 2.1267 0 3.2353 0 3.138 0 2 0 3 0 3 0 1 0 1 0 1 0 512.57 20446 2337 19684 47360 54881 54881 1 VDASVALLCDIQNTIINNLFR Unmodified 2388.2471 0.24712992 3127 Q9DBL1;E9Q5L3;A0A140LHL4 Acadsb Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 12 0 1 124.29 124.29 3 0.0063431 32781 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 37.672 23.362 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 818.79 20447 3127 19685 47361 54882 54882 1 VDATADYICK Unmodified 1154.5278 0.52777445 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 5 0 1 57.59 57.59 2 6.1466E-05 19599 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.79 60.185 0 20.216 0 30.301 16.118 68.83 0 19 0 28 19 65 0 1 0 1 1 1 3582.9 20448 2020 19686 47362 54883 54883 1 VDATEESDLAQQYGVR Unmodified 1779.8275 0.82752153 1331 P09103 P4hb Protein disulfide-isomerase yes yes 0 0 0 0 3 0 1 60.716 60.716 3 1.9089E-52 21561 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 153.94 118.99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20449 1331 19687 47363 54884 54884 1 VDCTANTNTCNK Unmodified 1396.5711 0.57111261 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 0 5.5 0.5 1 1 36.88 36.88 3 4.5191E-15 9632 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 134.99 113.43 85.414 56.926 0 29.528 57.22 0 83 56 0 28 56 0 2 1 0 1 1 0 5870.3 20450 1470 19688 47364;47365 54885;54886 54885 2 VDDDLGTIESLEEAK Unmodified 1632.773 0.77302634 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 3 0 1 76.768 76.768 3 0.034664 28946 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 34.612 14.231 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 2620.6 20451 1974 19689 47366 54887 54887 1 VDDESMQR Unmodified 978.40766 0.40765932 2891 Q99PV0 Prpf8 Pre-mRNA-processing-splicing factor 8 yes yes 0 0 0 0 2 0 1 34.066 34.066 2 0.024843 9023 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 75.38 40.572 20.207 0 30.194 0 0 0 19 0 28 0 0 0 1 0 1 0 0 0 912.83 20452 2891 19690 47367 54888 54888 1 VDDFLANEAK Unmodified 1120.5401 0.5400537 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 6 0 1 65.165 65.165 3 0.026524 22400 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.628 9.2499 20.346 8.2041 0 30.604 0 0 19 9 0 28 0 0 1 1 0 1 0 0 4110 20453 3142 19691 47368 54889 54889 1 VDDLLIIEEK Unmodified 1185.6493 0.6492698 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5.5 0.5 1 1 79.417 79.417 2 0.0098463 29842 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.758 29.036 89.8 43.64 18.739 0 105.06 47.411 84 47 19 0 102 46 2 2 1 0 2 1 5986 20454 3204 19692 47369;47370 54890;54891 54890 2 VDDNEETIK Unmodified 1061.4877 0.48768378 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 0 13 0 1 44.89 44.89 2 0.0009789 13837 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 108.67 59.3 69.372 74.058 0 0 73.412 116.23 65 74 0 0 74 111 1 1 0 0 1 1 7363.2 20455 3306 19693 47371 54892 54892 1 VDDNEETIKK Unmodified 1189.5826 0.5826468 3306 Q9R0Y5 Ak1 Adenylate kinase isoenzyme 1 yes yes 0 0 0 1 6.25 3.96 1 1 1 1 44.033 44.033 3 6.8048E-05 13589 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 101.95 74.333 313.73 383.61 770.32 177.82 618.42 422.56 296 382 742 176 603 405 2 3 4 2 3 3 55010 20456 3306 19694 47372;47373;47374;47375 54893;54894;54895;54896 54894 4 VDDQIYSEFR Unmodified 1270.583 0.58298115 3019 Q9D0B6 Pbdc1 Protein PBDC1 yes yes 0 0 0 0 4 0 1 62.507 62.507 2 0.00011574 22171 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.22 64.802 39.351 0 58.748 36.94 0 29.848 37 0 56 37 0 28 1 0 1 1 0 1 4516.1 20457 3019 19695 47376 54897 54897 1 VDDQVAIVFK Unmodified 1132.6128 0.61282471 1654 P58389;A2AWE9 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes no 0 0 0 0 7 0 1 70.981 70.981 3 0.0040478 24342 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.542 35.793 29.904 27.776 0 40.441 0 39.442 28 28 0 37 0 37 1 1 0 1 0 1 2661.9 20458 1654 19696 47377 54898 54898 1 VDDQVVAR Unmodified 900.46649 0.46649483 3391 Q9Z268;D3Z7V8 Rasal1 RasGAP-activating-like protein 1 yes no 0 0 0 0 4 0 1 38.887 38.887 2 0.011853 11050 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.548 32.106 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20459 3391 19697 47378 54899 54899 1 VDDSSEDKTEFTVK Unmodified 1598.7312 0.73116153 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 4.33 0.471 2 1 54.701 54.701 3;4 0.0012433 18191 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.234 36.407 207 98.158 112.42 124.3 66.822 78.884 194 102 111 121 65 74 3 2 2 3 1 1 12566 20460 2382 19698 47379;47380;47381 54900;54901;54902 54902 3 VDEEIALR Unmodified 943.49746 0.4974606 811 E0CZ78;P48453;G3X8U7;E9Q6P2 Ppp3cb Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform yes no 0 0 0 0 6.67 4.5 1 1 1 52.967 52.967 2 0.008761 18066 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 102 47.289 87.987 307.14 112.02 311.99 316.52 295.27 83 296 111 297 326 282 1 3 1 3 3 1 47366 20461 811 19699 47382;47383;47384 54903;54904;54905 54903 3 VDELTTDLEILK Unmodified 1387.7446 0.74462675 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 5.5 0.5 1 1 86.13 86.13 3 7.856E-06 32891 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.214 64.019 49.646 66.255 75.708 27.311 0 59.696 47 65 75 28 0 56 2 1 2 1 0 1 8132.4 20462 895 19700 47385;47386 54906;54907 54906 2 VDELTTDLEILKAEIEEK Unmodified 2087.0885 0.088546821 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 1 6 0 1 101.52 101.52 4 0.0013154 37434 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.314 38.526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 628.32 20463 895 19701 47387 54908 54908 1 VDENNPEYLR Unmodified 1247.5782 0.57823012 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;D3Z0T1 Add1 Alpha-adducin yes no 0 0 0 0 3 0.816 1 1 1 46.163 46.163 2 3.9306E-05 14823 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 119.53 84.084 79.273 73.78 144.23 114.35 197.62 160.28 74 71 139 111 199 155 2 3 3 2 4 4 62576 20464 3276 19702 47388;47389;47390 54909;54910;54911;54912;54913 54911 5 VDEYDYSKPIQGQQK Unmodified 1796.8581 0.85809337 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 1 8 3.56 1 1 1 51.866 51.866 3 2.2173E-07 16311 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 113.54 78.927 138.61 142.15 140.74 130.09 192.05 221.58 130 139 139 130 194 213 2 2 2 2 2 3 24175 20465 2597 19703 47391;47392;47393 54914;54915;54916 54915 3 VDFILLK Unmodified 846.52149 0.52149051 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 10.8 1.48 1 1 1 1 80.713 80.713 2 0.0087234 31087 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.86 0 976.55 748.38 918.7 711.83 956.25 1118.4 918 772 922 702 977 1073 4 3 4 3 4 4 154510 20466 2479 19704 47394;47395;47396;47397 54917;54918;54919;54920;54921 54921 5 VDFNVPMK Unmodified 948.47389 0.47388839 1334 P09411;S4R2M7;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase;Phosphoglycerate kinase 2 yes no 0 0 0 0 9 2.1 1 2 1 1 66.144 66.144 2;3 0.011684 22192 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.439 48.631 879.92 586.3 950.38 614.95 915.95 822.39 827 605 924 611 923 793 6 6 5 5 6 5 107350 20467 1334 19705 47398;47399;47400;47401;47402 54922;54923;54924;54925;54926;54927;54928 54923 7 VDFPQDQLATLTGR Unmodified 1559.7944 0.79437091 1327 P08249 Mdh2 Malate dehydrogenase, mitochondrial yes yes 0 0 0 0 8 2.87 2 1 2 2 2 73.417 73.417 2;3 4.1692E-36 25571 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 177.93 115.76 531.5 776.41 722.65 654.96 754.11 451.91 500 771 720 644 756 435 8 12 11 13 13 8 358620 20468 1327 19706 47403;47404;47405;47406;47407;47408;47409;47410;47411 54929;54930;54931;54932;54933;54934;54935;54936;54937;54938;54939;54940;54941;54942 54935 14 VDFSLAGALNAGFK Unmodified 1408.7351 0.73506511 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 10.4 1.74 3 1 1 86.113 86.113 3 6.794E-08 30117 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 84.365 59.573 20.244 60.427 0 0 0 0 19 60 0 0 0 0 1 2 0 0 0 0 15217 20469 1304 19707 47412;47413;47414;47415;47416 54943;54944;54945;54946;54947 54944 5 VDFSLAGALNAGFK Deamidation (N) 1409.7191 0.7190807 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 1 0 0 11 0 1 85.728 85.728 3 0.00017343 27015 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.543 60.01 59.852 0 39.732 0 0 0 56 0 37 0 0 0 1 0 1 0 0 0 10883 20470 1304 19707 47417 54948 54948 361 1 VDGEDTGEK Unmodified 948.40362 0.4036198 2695 Q8VDC0;A0A1L1SSW1 Lars2 Probable leucine--tRNA ligase, mitochondrial yes no 0 0 0 0 2 0 1 37.629 37.629 2 0.03443 10725 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.245 28.171 0 19.758 27.404 38.309 26.529 29.091 0 19 28 37 28 28 0 1 1 1 1 1 1138.9 20471 2695 19708 47418 54949 54949 1 VDGLLTCCSVFINK Unmodified 1624.7953 0.79529888 2980 Q9CWS0;D3YU15 Ddah1 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 yes no 0 0 0 0 9 0.816 1 1 1 79.066 79.066 3 4.7832E-05 26991 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.69 79.094 197.54 188.25 289.93 186.65 116.85 233.32 186 194 287 186 120 222 3 4 4 3 1 3 34795 20472 2980 19709 47419;47420;47421 54950;54951;54952;54953 54952 4 VDGLVNFEK Unmodified 1019.5288 0.52876073 62 A0A0A6YWG7;E9QNQ4;Q8CHG7;Q5NCJ4;Q5NCJ5;Q5NCJ0;B2RUJ6;Q5NCJ1 Rapgef2;Rapgef6 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 8 0 1 67.983 67.983 3 0.046117 22368 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.598 25.078 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20473 62 19710 47422 54954 54954 1 VDGMDILCVR Unmodified 1176.5631 0.5631141 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 70.53 70.53 2;3 0.011822 25010 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.092 0.80823 48.802 64.798 64.104 46.966 28.62 58.879 46 65 65 46 28 56 1 2 2 1 1 2 13413 20474 1520 19711 47423;47424 54955;54956 54955 2 VDHFVQWGVDNYNYLQNAPPGFFPR Unmodified 2979.4093 0.4092613 3158 Q9DCZ4 Apoo Apolipoprotein O yes yes 0 0 0 0 10.5 1.66 2 1 1 87.324 87.324 3;4 4.4525E-05 34313 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.097 35.419 20.149 48.486 67.319 19 0 20.254 19 46 65 19 0 19 1 1 2 1 0 1 11110 20475 3158 19712 47425;47426;47427;47428 54957;54958;54959;54960 54960 4 VDHGAEIITQSPSR Unmodified 1508.7583 0.75831975 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 4.5 0.5 1 1 42.146 42.146 3 4.6557E-11 12147 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.476 73.484 0 87.71 36.002 38.295 38.702 0 0 83 37 37 37 0 0 2 1 1 1 0 9717.5 20476 1424 19713 47429;47430 54961;54962;54963 54963 3 VDHTVGWPLDR Unmodified 1293.6466 0.64658446 2244 Q6PF96;Q921G7 Etfdh Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial yes no 0 0 0 0 6 0 1 55.766 55.766 3 0.011284 18114 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.333 20.606 128.13 0 105.56 93.297 109.55 66.164 120 0 102 93 111 65 1 0 1 1 1 1 4530.9 20477 2244 19714 47431 54964 54964 1 VDIAEGR Unmodified 758.39227 0.39226725 3333 Q9WUK2 Eif4h Eukaryotic translation initiation factor 4H yes yes 0 0 0 0 4 0 1 41.419 41.419 2 0.055109 12150 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.189 35.543 0 118.1 0 0 235.35 0 0 111 0 0 225 0 0 1 0 0 1 0 39348 20478 3333 19715 47432 54965 54965 1 VDIEFDYDGPLMK Unmodified 1540.7119 0.71194641 1702 P61922;Q3TUE8;F7C9G3 Abat 4-aminobutyrate aminotransferase, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 82.266 82.266 3 7.9718E-06 30485 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.17 86.758 78.697 53.048 73.55 65.958 37.403 20.254 74 56 74 65 37 19 2 2 2 2 1 1 8087.7 20479 1702 19716 47433;47434 54966;54967 54967 2 VDILDPALLR Unmodified 1123.6601 0.66010926 463 A2AGN7;B7ZCF1;O88685 Psmc3 26S protease regulatory subunit 6A yes no 0 0 0 0 8.67 3.09 1 1 1 80.023 80.023 2 0.00081808 29494 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.972 47.079 0 108.53 0 48.724 119.66 105.32 0 102 0 46 120 102 0 2 0 1 2 2 13915 20480 463 19717 47435;47436;47437 54968;54969;54970 54968 3 VDIVSPGGDNAGSLR Unmodified 1455.7318 0.73177065 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 5 0 1 56.46 56.46 2 0.00015372 19044 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.902 61.71 24.497 12.916 19.66 0 24.058 0 23 14 19 0 23 0 1 1 1 0 1 0 3473.5 20481 1999 19718 47438 54971 54971 1 VDKGVVPLAGTDGETTTQGLDGLLER Unmodified 2640.3606 0.36063936 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 1 7.75 3.11 1 1 1 1 75.131 75.131 3 1.2908E-22 27866 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.176 81.876 20.387 89.074 18.048 60.132 46.807 67.954 19 84 19 56 46 65 1 3 1 2 1 3 25985 20482 1308 19719 47439;47440;47441;47442 54972;54973;54974;54975 54972 4 VDKGVVPLAGTNGETTTQGLDGLSER Unmodified 2613.3246 0.3245882 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 1 5 0 1 64.828 64.828 4 1.861E-21 22936 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.541 84.117 0 0 0 30.104 26.577 38.684 0 0 0 28 28 37 0 0 0 1 1 1 3258.4 20483 1309 19720 47443 54976 54976 1 VDKGVVPLAGTNGETTTQGLDGLSER Deamidation (N) 2614.3086 0.30860379 1309 P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98 Aldoa;Aldoart1 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 1 7.62 3.16 2 3 1 2 66.599 66.599 3;4 9.2515E-23 24371 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 99.423 91.526 403.84 402.47 463.8 374.34 726.56 546.72 380 406 459 367 729 530 7 7 7 5 8 7 168990 20484 1309 19720 47444;47445;47446;47447;47448;47449;47450;47451 54977;54978;54979;54980;54981;54982;54983;54984;54985 54985 369 9 VDKLDASESLR Unmodified 1231.6408 0.64083038 2185 Q68FD5;Q5SXR6;F6Z1R4 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 6 0.816 1 1 1 50.986 50.986 3 0.0033927 14945 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.879 39.9 424.22 446.46 668.65 419.93 658.84 538.78 399 457 662 432 666 520 2 4 4 4 4 3 158320 20485 2185 19721 47452;47453;47454 54986;54987;54988;54989 54989 4 VDLEGER Unmodified 816.39775 0.39774656 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 0 3 0 1 41.563 41.563 2 0.047225 12713 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.282 29.367 79.08 63.828 0 60.025 62.915 67.495 74 65 0 56 65 65 1 1 0 1 1 1 20207 20486 1695 19722 47455 54990 54990 1 VDLEGEREVSYGEGK Unmodified 1665.7846 0.78459408 1695 P61226 Rap2b Ras-related protein Rap-2b yes yes 0 0 0 1 4 0 1 51.843 51.843 3 0.00044528 17138 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.856 47.555 0 39.368 0 0 77.404 0 0 37 0 0 74 0 0 1 0 0 1 0 6146.1 20487 1695 19723 47456 54991 54991 1 VDLESER Unmodified 846.40831 0.40831125 2346 Q80ZJ1 Rap2a Ras-related protein Rap-2a yes yes 0 0 0 0 3 0.816 1 1 1 41.47 41.47 2 0.011857 12215 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.953 32.404 69.18 45.361 56.46 88.447 0 118.33 65 46 56 84 0 111 2 1 1 2 0 2 19410 20488 2346 19724 47457;47458;47459 54992;54993;54994 54994 3 VDLFYLHAPDHSTPVEETLR Unmodified 2338.1594 0.15936077 2534 Q8CG76 Akr7a2 Aflatoxin B1 aldehyde reductase member 2 yes yes 0 0 0 0 6 0 1 68.273 68.273 4 0.0092606 23936 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 35.703 17.107 49.225 26.473 0 50.278 0 59.696 46 28 0 46 0 56 1 1 0 1 0 1 3058.3 20489 2534 19725 47460 54995 54995 1 VDLGVLGK Unmodified 799.48035 0.48035398 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 8.5 0.5 1 1 68.198 68.198 2 0.0036717 21769 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.99 48.95 574.83 273.83 539.2 116.53 748.81 0 540 287 521 120 721 0 2 1 2 1 2 0 44298 20490 3022 19726 47461;47462 54996;54997 54997 2 VDLHFMK Unmodified 888.45276 0.45275902 602;2570 B1AWV9;Q8JZR6 Slc4a10;Slc4a8 Anion exchange protein;Electroneutral sodium bicarbonate exchanger 1 no no 0 0 0 0 8 0 1 59.473 59.473 3 0.031743 18357 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.103 27.294 48.892 25.547 56.724 46.897 0 0 46 28 56 46 0 0 1 1 1 1 0 0 3139.4 20491 602;2570 19727 47463 54998 54998 1 VDLLFLGK Unmodified 903.54295 0.54295423 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9;A0A0U1RQB4 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 10.5 0.5 1 1 85.416 85.416 2;3 0.0036717 27424 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 121.99 19.275 0 118.1 0 39.595 44.987 206.37 0 111 0 37 46 200 0 2 0 1 1 3 34903 20492 3155 19728 47464;47465 54999;55000;55001 55000 3 VDLLNQEIEFLK Unmodified 1459.7922 0.79224564 662 CON__P35908v2;CON__P35908 yes no 0 0 0 0 13 0 1 89.873 89.873 3 2.4602E-05 35630 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.362 45.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 + 20493 662 19729 47466 55002 55002 1 VDLSNQLEEER Unmodified 1330.6365 0.63647328 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 3 0 1 54.707 54.707 2 0.00029367 18848 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 83.081 49.121 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20494 3358 19730 47467 55003 55003 1 VDLSSEQAEK Unmodified 1104.5299 0.52988294 2321 Q80VD1 Fam98b Protein FAM98B yes yes 0 0 0 0 4 0 1 48.707 48.707 3 0.00096049 15660 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.067 45.324 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20495 2321 19731 47468 55004 55004 1 VDLSTSTDWK Unmodified 1150.5506 0.55061839 2802 Q922B1 Macrod1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 0 0 0 0 6 0 1 64.22 64.22 3 0.0056685 21966 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.348 18.33 0 48.944 0 49.77 27.002 0 0 46 0 46 28 0 0 1 0 1 1 0 1879.1 20496 2802 19732 47469 55005 55005 1 VDLTQMQTFWK Unmodified 1395.6857 0.68567208 355 A0A2C9F2C1;A0A286YCU4;Q9R0N7 Syt7 Synaptotagmin-7 yes no 0 0 0 0 10 0 1 83.671 83.671 2 6.4509E-11 26576 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 123.01 78.027 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20497 355 19733 47470 55006 55006 1 VDLVCHGK Unmodified 926.46439 0.46438634 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 0 8 0 1 44.837 44.837 3 0.012265 11483 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.2 41.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20498 441 19734 47471 55007 55007 1 VDLVDENFTELR Unmodified 1448.7147 0.7147236 1687 P61087;A0A0J9YUI1;D3Z4U3;F8WIC2 Ube2k Ubiquitin-conjugating enzyme E2 K yes no 0 0 0 0 3.67 0.471 1 2 74.403 74.403 2;3 2.6837E-06 27334 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102.66 82.555 39.701 20.216 9 20.767 0 29.848 37 19 9 19 0 28 1 1 1 1 0 1 12362 20499 1687 19735 47472;47473;47474 55008;55009;55010 55010 3 VDLVDESGYVPGYK Unmodified 1539.7457 0.74568938 2291 Q7TQD2 Tppp Tubulin polymerization-promoting protein yes yes 0 0 0 0 7.83 3.72 1 1 2 2 71.335 71.335 2;3;4 3.6646E-24 26517 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143.79 117.67 354.96 591.83 417.72 453.96 466.46 717.97 334 584 426 445 483 686 5 7 5 7 6 7 249230 20500 2291 19736 47475;47476;47477;47478;47479;47480 55011;55012;55013;55014;55015;55016;55017;55018 55018 8 VDMTCEEEEELLQLK Unmodified 1864.8434 0.84343087 1196 O35465 Fkbp8 Peptidyl-prolyl cis-trans isomerase FKBP8 yes yes 0 0 0 0 3.5 0.5 1 1 80.663 80.663 3 0.00093508 30447 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.599 45.159 19 5.2418 4.6772 9.3893 8.9827 0 19 5 5 9 9 0 1 1 1 1 1 0 1925.2 20501 1196 19737 47481;47482 55019;55020 55019 2 VDNAYWLWTFQGR Unmodified 1654.7892 0.78922595 2569 Q8JZQ9;A0A0G2JG48 Eif3b Eukaryotic translation initiation factor 3 subunit B yes no 0 0 0 0 9 0 1 85.184 85.184 2 0.011584 29676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.237 26.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20502 2569 19738 47483 55021 55021 1 VDNDENEHQLSLR Unmodified 1567.7227 0.72266253 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 3 0 1 41.335 41.335 3 7.8682E-05 12585 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 80.534 60.84 0 48.195 44.814 46.393 64.568 37.6 0 46 46 46 65 37 0 1 1 1 1 1 28870 20503 2056 19739 47484 55022 55022 1 VDNEFDQR Unmodified 1021.4465 0.44648767 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 4.97 1 1 1 42.177 42.177 2 0.023009 12311 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.465 38.305 76.719 25.068 176.97 44.331 118.51 144.79 74 28 167 46 120 139 2 1 2 1 2 2 48875 20504 3204 19740 47485;47486;47487 55023;55024;55025 55025 3 VDNQHDFQDIASVVALTK Unmodified 1999.0011 0.0010692176 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8.43 3.02 1 1 2 1 2 76.731 76.731 3;4 6.8378E-10 26450 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 112.56 88.273 494.06 262.97 455.42 233.25 546.96 288.69 464 268 437 223 538 278 7 5 6 4 6 4 217830 20505 1282 19741 47488;47489;47490;47491;47492;47493;47494 55026;55027;55028;55029;55030;55031;55032;55033 55031 8 VDNSSLTGESEPQTR Deamidation (N) 1619.7275 0.72747313 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp4a;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 1 0 0 3.57 3.92 2 2 2 1 44.914 44.914 2;3 2.7764E-11 14217 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 122.75 106.38 218.65 156.58 150.77 242.63 281.87 270.22 205 159 148 233 289 259 5 4 5 6 7 4 79113 20506 106;2253;2699 19742 47495;47496;47497;47498;47499;47500;47501 55034;55035;55036;55037;55038;55039;55040 55037 46 7 VDNSSLTGESEPQTR Unmodified 1618.7435 0.74345755 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q8VDN2 Atp1a3;Atp4a;Atp1a2;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 4.92 3.71 2 4 3 1 2 42.82 42.82 2;3 8.8508E-96 13033 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 226.51 183.77 667.28 572.1 518.44 598.1 461.59 613.66 627 584 519 580 473 593 12 11 9 11 8 10 914760 20507 106;2253;2699 19742 47502;47503;47504;47505;47506;47507;47508;47509;47510;47511;47512;47513 55041;55042;55043;55044;55045;55046;55047;55048;55049;55050;55051;55052;55053;55054;55055 55043 15 VDPEIQNVK Unmodified 1040.5502 0.55022446 662 CON__P35908v2;CON__P35908 no no 0 0 0 0 5.5 0.5 1 1 52.868 52.868 3 0.0015013 16627 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.376 46.512 39.129 45.341 57.674 0 83.862 86.085 37 46 56 0 83 83 1 1 1 0 1 1 6763.4 + 20508 662 19743 47514;47515 55056;55057 55057 2 VDPIGPLSYTGGVSELAR Unmodified 1829.9523 0.95232811 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 7 0 1 76.11 76.11 2 0.00025461 26778 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 62.89 37.504 0 0 19.246 29.457 0 0 0 0 19 28 0 0 0 0 1 1 0 0 2946.5 20509 570 19744 47516 55058 55058 1 VDPVNFK Unmodified 817.4334 0.43340378 2735 Q91VB8;P01942;A7M7S6;P06467 haemaglobin alpha 2;Hba;Hba-x;Hbz Hemoglobin subunit alpha;Hemoglobin subunit zeta no no 0 0 0 0 9 2.67 1 2 1 1 2 57.751 57.751 2;3 0.0065398 18179 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.614 45.376 487.52 548.15 690.55 568.91 647.17 368.85 460 547 691 566 649 353 4 3 5 4 3 4 490290 + 20510 2735 19745 47517;47518;47519;47520;47521;47522;47523 55059;55060;55061;55062;55063;55064;55065 55060 7 VDQDQNVVHPQLLSLTSQLK Unmodified 2261.2016 0.20155994 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 0 7.33 0.471 2 1 71.324 71.324 3;4 1.1955E-29 24555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 136.62 112.22 99.223 59.491 44.77 131.76 116.69 39.442 93 61 46 125 116 37 3 2 1 3 2 1 29315 20511 2727 19746 47524;47525;47526 55066;55067;55068 55067 3 VDQEIMNIIQER Unmodified 1486.745 0.74497787 3151 Q9DCS9;D3YUK4 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes no 0 0 0 0 5.5 0.5 1 1 81.042 81.042 3 0.00015151 29955 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.278 59.335 9.4713 29.043 16.34 30.211 19.874 20.254 9 28 18 28 19 19 1 1 2 1 1 1 8017.1 20512 3151 19747 47527;47528 55069;55070 55070 2 VDQGFLGAVISLFTPTTDPEAER Unmodified 2462.2329 0.23291965 2475 Q8BX70;A0A1L1SS63 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 0 10 0 1 112.86 112.86 3 0.00011116 34417 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.489 39.442 0 0 0 0 5.0519 5.1858 0 0 0 0 5 5 0 0 0 0 1 1 560.3 20513 2475 19748 47529 55071 55071 1 VDQGTLFELILAANYLDIK Unmodified 2135.1514 0.15142185 3325 Q9WTX5 Skp1 S-phase kinase-associated protein 1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 113.94 113.94 3;4 3.4125E-08 38226 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.316 53.82 22.392 23.688 20.219 27.748 0 12.792 21 24 21 27 0 12 1 2 2 3 0 1 6073.1 20514 3325 19749 47530;47531;47532;47533 55072;55073;55074;55075;55076 55072 5 VDQICHR Unmodified 926.43923 0.43923422 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 6 0 1 31.697 31.697 3 0.065316 6825 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.117 6.9577 29.794 27.469 18.76 0 29.288 0 28 28 19 0 28 0 1 1 1 0 1 0 1267 20515 3316 19750 47534 55077 55077 1 VDQIIMAK Unmodified 916.50519 0.50518852 1543 P42932;H3BL49 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 9 0 1 65.251 65.251 2 0.020226 20377 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.113 26.767 99.576 42.23 0 0 0 127.92 93 46 0 0 0 120 1 1 0 0 0 1 5001.3 20516 1543 19751 47535 55078 55078 1 VDQSAVGFEYQGK Unmodified 1426.6729 0.67285879 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 7.75 3.11 1 1 1 1 58.824 58.824 3 1.2256E-05 20234 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.17 69.789 365.06 280.88 157.26 337.92 421.52 288.61 342 277 157 325 426 277 4 3 2 4 4 4 52631 20517 2075 19752 47536;47537;47538;47539 55079;55080;55081;55082;55083 55079 5 VDQSILTGESVSVIK Unmodified 1573.8563 0.85630246 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 8.67 3.09 1 1 1 72.572 72.572 3 8.7469E-06 26043 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.837 28.618 255.92 101.92 182.24 236.22 287.07 66.354 240 102 185 231 287 65 3 1 3 3 3 1 23654 20518 1242 19753 47540;47541;47542 55084;55085;55086 55084 3 VDQVLHTQTDADPAEEYAR Unmodified 2156.9974 0.9974404 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 3.5 0.5 1 1 56.259 56.259 3 5.6771E-06 19596 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.866 56.587 20.134 18.409 26.873 68.769 0 0 19 19 28 66 0 0 1 1 1 2 0 0 13208 20519 145 19754 47543;47544 55087;55088 55087 2 VDREQLVQK Acetyl (Protein N-term) 1155.6248 0.62478638 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 1 0 0 1 6.25 3.96 1 1 1 1 47.307 47.307 2 4.6384E-05 15443 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.682 32.944 276.49 189.3 497.92 390.06 235.24 438.88 259 186 493 380 241 418 2 2 3 3 2 3 290260 20520 1706 19755 47545;47546;47547;47548 55089;55090;55091;55092 55089 4 VDSANALANGLIAGGHAAR Deamidation (N) 1777.9071 0.90710925 2186 Q68FG2 Sptbn2 yes yes 0 1 0 0 8 3.56 1 1 1 53.706 53.706 3 9.6286E-11 17846 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.53 85.219 30.044 28.645 166.42 93.949 99.486 224.22 28 28 158 93 102 213 1 1 2 2 1 3 31926 20521 2186 19756 47549;47550;47551 55093;55094;55095 55093 880 3 VDSANALANGLIAGGHAAR Unmodified 1776.9231 0.92309367 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 0 1 59.174 59.174 3 1.6443E-05 18277 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.231 44.977 69.745 0 0 0 0 39.442 65 0 0 0 0 37 1 0 0 0 0 1 5631.4 20522 2186 19756 47552 55096 55096 1 VDSCPFICLGGEK Unmodified 1480.669 0.66903574 860 E9PZ43;A0A0G2JDN7 Map4 Microtubule-associated protein yes no 0 0 0 0 7 0 1 70.064 70.064 3 0.0015427 23956 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.21 29.234 48.402 64.12 106.27 0 66.005 57.813 46 65 102 0 65 56 1 1 1 0 1 1 4566 20523 860 19757 47553 55097 55097 1 VDSDNLCTEEIFPTEGAGTDLR Unmodified 2438.0907 0.09074844 2736 Q91VD9 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes yes 0 0 0 0 3 0.707 1 2 1 73.222 73.222 3;4 6.3587E-16 26539 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 92.034 79.185 29.178 18.532 59.378 20.767 49.162 20.254 28 19 56 19 47 19 2 1 3 1 3 1 27498 20524 2736 19758 47554;47555;47556;47557 55098;55099;55100;55101;55102 55098 5 VDSESYR Unmodified 854.37701 0.37701112 2374 Q8BGB7 Enoph1 Enolase-phosphatase E1 yes yes 0 0 0 0 3 0 1 33.366 33.366 2 0.012751 8953 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 117.18 70.341 118.6 100.53 0 0 162.02 94.515 111 102 0 0 158 93 1 1 0 0 1 1 11222 20525 2374 19759 47558 55103 55103 1 VDSFLPATGVTYK Unmodified 1396.7238 0.72383172 1905 Q14CH0 Fam171b Protein FAM171B yes yes 0 0 0 0 8.5 0.5 1 1 73.519 73.519 3 0.019623 24938 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.577 19.379 0 29.792 0 0 0 40.508 0 28 0 0 0 38 0 1 0 0 0 1 2704.4 20526 1905 19760 47559;47560 55104;55105 55104 2 VDSIDDR Unmodified 818.37701 0.37701112 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 2 0 1 38.505 38.505 2 1.4252E-09 11114 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 172.03 69.258 252.37 170.25 0 0 258.12 250.61 236 176 0 0 255 242 1 1 0 0 1 1 100240 20527 2148 19761 47561 55106 55106 1 VDSILLTHIGDDNLPGINSMLQR Unmodified 2520.3006 0.30062206 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 7 0 1 86.255 86.255 3 3.1853E-07 31610 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.876 28.547 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20528 1382 19762 47562 55107 55107 1 VDSLIPWIR Unmodified 1097.6233 0.62332982 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 11 0 1 85.383 85.383 2 0.01978 26865 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.246 31.168 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2858.2 20529 581 19763 47563 55108 55108 1 VDSLLESLEK Unmodified 1131.6023 0.60231961 3389 Q9Z204 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 0 6.5 0.5 1 1 82.536 82.536 2;3 0.0038053 29871 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.974 27.696 49.358 0 38.774 67.507 65.228 48.241 46 0 37 65 65 47 1 0 1 2 1 2 4639.8 20530 3389 19764 47564;47565 55109;55110 55110 2 VDSNKEDDVAELK Unmodified 1460.6995 0.69946747 919;937 E9Q6Q4;A0A0G2JGC8;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 1 4.5 0.5 1 1 53.843 53.843 3 0.00023888 17718 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.875 46.68 168.04 180.8 281.85 162.7 102.92 148.17 158 185 278 166 102 139 1 2 2 2 1 1 34933 20531 919;937 19765 47566;47567 55111;55112 55112 2 VDSPTVNTTLR Unmodified 1201.6303 0.63026569 717 Q91YS4;D3YXZ3;O88448 Klc2 Kinesin light chain 2 yes no 0 0 0 0 5 0 1 47.57 47.57 2 0.059015 14812 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.785 27.279 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20532 717 19766 47568 55113 55113 1 VDSPTVTTTLK Unmodified 1160.6289 0.62886871 923 Q5UE59;E9Q7C9;Q7TNF4;Q8CD76;O88447;F6UYN4 Klc1 Kinesin light chain 1 yes no 0 0 0 0 6.5 0.5 1 1 54.937 54.937 2;3 0.0018816 17713 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.598 28.466 79.301 150.97 69.313 29.123 74.768 76.75 75 148 74 28 74 74 2 2 2 1 1 1 5617.8 20533 923 19767 47569;47570 55114;55115 55114 2 VDSSNGFLIDGYPR Deamidation (N) 1539.7205 0.72053726 3306 Q9R0Y5;A0A0A6YXW8 Ak1 Adenylate kinase isoenzyme 1 yes no 0 1 0 0 4.8 0.748 2 2 1 70.21 70.21 2;3 9.7811E-20 25433 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.58 92.84 143.36 82.799 48.567 166.79 245.9 170.21 134 85 46 159 248 164 5 4 1 6 7 4 36530 20534 3306 19768 47571;47572;47573;47574;47575 55116;55117;55118;55119;55120;55121;55122 55119 1128 7 VDTEDVEK Unmodified 933.42911 0.42910627 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 3 0 1 45.367 45.367 3 0.0067608 14522 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.954 23.062 0 69.16 0 90.719 0 108.73 0 65 0 83 0 102 0 1 0 1 0 1 2285.7 20535 3316 19769 47576 55123 55123 1 VDTGATGSTEPK Unmodified 1161.5513 0.55134667 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 4.5 0.5 1 1 40.109 40.109 2;3 8.537E-05 11645 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.616 52.507 78.666 111.62 109.28 105.57 118.7 85.091 74 111 111 102 120 83 2 2 2 2 1 1 12686 20536 1999 19770 47577;47578 55124;55125;55126 55125 3 VDTIAADESFSQVDLGGR Unmodified 1878.8959 0.89593544 1623 P54763 Ephb2 Ephrin type-B receptor 2 yes yes 0 0 0 0 4 0 1 70.577 70.577 3 0.0052399 25591 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.952 15.086 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20537 1623 19771 47579 55127 55127 1 VDTILEFSQNMNTK Unmodified 1638.7923 0.792322 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 8 0 1 80.799 80.799 3 0.0079321 28424 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.318 25.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20538 2222 19772 47580 55128 55128 1 VDTTIALV Unmodified 830.47493 0.47493425 1980 Q3UHD9 Agap2 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 yes yes 0 0 0 0 5 0 1 77.863 77.863 2 0.024959 29047 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.311 75.311 20.209 0 29.842 7.8942 8.7304 9.3449 19 0 28 9 9 9 1 0 1 1 1 1 1773.1 20539 1980 19773 47581 55129 55129 1 VDTVNNMADELINSGHSDAATIAEWK Unmodified 2800.2974 0.29738717 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 5 0 1 84.415 84.415 4 0.054364 32103 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 23.585 15.593 30.044 0 0 0 0 29.848 28 0 0 0 0 28 1 0 0 0 0 1 5175.8 20540 2148 19774 47582 55130 55130 1 VDTWFNQPAR Unmodified 1232.5938 0.5938206 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 0 8.5 0.5 1 1 62.457 62.457 2 0.0018003 19806 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.681 56.157 0 38.602 45.815 73.837 46.424 0 0 37 46 74 46 0 0 1 1 2 1 0 10338 20541 1574 19775 47583;47584 55131;55132 55131 2 VDVDCCEK Unmodified 1023.4001 0.4001311 2605 Q8K356;Q9WUC3 Ly6h Lymphocyte antigen 6H yes no 0 0 0 0 4.5 0.5 1 1 44.308 44.308 2 0.012399 13532 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.543 12.827 108.2 101.85 123.18 0 67.99 99.138 102 102 120 0 65 93 2 1 2 0 1 1 15774 20542 2605 19776 47585;47586 55133;55134 55133 2 VDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLR Unmodified 3758.5286 0.52858149 2901 Q9CPW4;Q3UA72 Arpc5 Actin-related protein 2/3 complex subunit 5 yes no 0 0 0 1 1 0 1 68.32 68.32 4 0.0088779 23146 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 29.385 27.69 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2567.7 20543 2901 19777 47587 55135 55135 1 VDVIQEPGLSGR Unmodified 1268.6725 0.67246486 2486 Q8C0L0;A2ARI0 Tmx4 Thioredoxin-related transmembrane protein 4 yes no 0 0 0 0 5 0 1 57.895 57.895 2 0.042499 19748 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.741 9.7227 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20544 2486 19778 47588 55136 55136 1 VDVPAADLSDQVPDTDSETR Unmodified 2128.976 0.97603626 1297 P01027 C3 Complement C3;Complement C3 beta chain;C3-beta-c;Complement C3 alpha chain;C3a anaphylatoxin;Acylation stimulating protein;Complement C3b alpha' chain;Complement C3c alpha' chain fragment 1;Complement C3dg fragment;Complement C3g fragment;Complement C3d fragment;Complement C3f fragment;Complement C3c alpha' chain fragment 2 yes yes 0 0 0 0 2 0 1 63.329 63.329 3 0.056388 22421 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 28.178 16.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2581.8 20545 1297 19779 47589 55137 55137 1 VDVSPTSQR Unmodified 987.49852 0.49852324 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7 3.16 1 1 1 1 1 37.357 37.357 2 6.3266E-18 9989 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 184.04 62.365 1118.1 833.3 883.24 649.04 1105.3 1121.4 1054 865 887 661 1117 1080 5 4 3 3 3 3 238440 20546 2843 19780 47590;47591;47592;47593;47594 55138;55139;55140;55141;55142 55142 5 VDVYDEGSYTCSVQTQHEPK Unmodified 2341.0169 0.016855216 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 4 0.816 1 1 1 52.845 52.845 4 2.839E-11 17588 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.238 70.984 59.179 130.91 140.66 35.631 74.457 38.153 56 129 139 37 74 37 2 3 3 1 2 1 14194 20547 13 19781 47595;47596;47597 55143;55144;55145 55144 3 VDWLTEK Unmodified 889.45453 0.45453316 1345;1679;135 A0A0N4SVP8;Q91VC3;A2AFK7;E9PV04;P10630;Q8BTU6;A0A338P6X5;E9Q561;P60843 Eif4a3;Gm8994;Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 7 0 1 68.334 68.334 3 0.053984 23104 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.849 18.7 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 1747.2 20548 135;1345;1679 19782 47598 55146 55146 1 VDYAGVTVDELGK Unmodified 1364.6824 0.68236084 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 7 3.16 1 1 1 1 1 68.591 68.591 2;3 3.7082E-33 23319 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 186.02 147 540.8 450.43 560.88 336.23 336.14 527.63 509 463 557 334 344 502 5 5 5 4 4 4 314400 20549 1806 19783 47599;47600;47601;47602;47603 55147;55148;55149;55150;55151;55152 55151 6 VDYLTPDFPSLSYPNYYTLMTGR Unmodified 2712.2782 0.27815528 2380 Q8BGN3;D3YU63;A0A1B0GS66 Enpp6 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 yes no 0 0 0 0 9 0 1 96.698 96.698 3 0.006102 34649 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 34.405 22.552 0 0 0 9.6683 8.9699 0 0 0 0 9 9 0 0 0 0 1 1 0 945.19 20550 2380 19784 47604 55153 55153 1 VDYYEVLGVQR Acetyl (Protein N-term) 1381.6878 0.68778057 93 A0A0G2JER9;O54946;G3X8S5;A0A0G2JGN9;A0A0G2JEI3;Q9QYI8 Dnajb6;Dnajb7 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 7 yes no 1 0 0 0 4 0 1 82.518 82.518 2 0.00030507 31196 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.019 40.925 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20551 93 19785 47605 55154 55154 1 VDYYEVLGVQR Unmodified 1339.6772 0.67721588 93 A0A0G2JER9;O54946;G3X8S5;A0A0G2JGN9;A0A0G2JEI3;Q9QYI8 Dnajb6;Dnajb7 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 7 yes no 0 0 0 0 6.5 0.5 1 1 68.96 68.96 3 0.0064042 24237 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.08 32.617 0 0 49.637 27.314 17.611 29.345 0 0 47 28 19 28 0 0 1 1 1 1 2555.7 20552 93 19785 47606;47607 55155;55156 55155 2 VEAAAEVQPR Unmodified 1068.5564 0.55637247 1128 Q6A065;H7BX26 Cep170 Centrosomal protein of 170 kDa yes no 0 0 0 0 4 0 1 41.446 41.446 2 0.0064925 12258 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.607 47.157 39.469 0 39.013 18.442 0 29.848 37 0 37 19 0 28 1 0 1 1 0 1 2094.3 20553 1128 19786 47608 55157 55157 1 VEAAPAGSGPLR Acetyl (Protein N-term) 1165.6091 0.60913632 2320 Q80VC9 Camsap3 Calmodulin-regulated spectrin-associated protein 3 yes yes 1 0 0 0 2 0 1 52.208 52.208 2 5.8383E-09 17208 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 83.869 66.174 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20554 2320 19787 47609 55158 55158 1 VEADRPGK Acetyl (Protein N-term) 912.46649 0.46649483 385;3339 A0A2I3BRL8;Q91VM5;A0A2I3BQC0;Q9DAE2;Q9WV02;A2AFI3;A2AFI4 Rbmxl1;Rbmxl2;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 1 0 0 1 2 0 1 34.912 34.912 3 0.051146 9438 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 45.081 34.614 0 0 27.664 59.084 25.244 38.722 0 0 28 56 28 37 0 0 1 1 1 1 1158.9 20555 385;3339 19788 47610 55159 55159 1 VEAENTHVDPR Unmodified 1265.6 0.60002819 1123 H3BKV8;P70408 Cdh10 Cadherin-10 yes no 0 0 0 0 3 0 1 32.551 32.551 3 0.0010426 8565 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.289 43.648 29.807 46.934 0 20.767 0 20.254 28 46 0 19 0 19 1 1 0 1 0 1 2600.9 20556 1123 19789 47611 55160 55160 1 VEALGQFVMK Unmodified 1120.5951 0.59506616 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 11 2 1 1 74.738 74.738 2;3 3.1277E-05 24828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.86 74.492 0 0 42.448 67.253 67.1 57.781 0 0 42 65 69 56 0 0 1 1 1 1 6962 20557 1752 19790 47612;47613 55161;55162 55161 2 VEAPEDK Unmodified 786.37595 0.37594848 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 3.5 0.5 1 1 40.457 40.457 2;3 0.0090535 11763 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.82 20.189 30.044 0 0 39.589 45.317 28.555 28 0 0 37 46 28 1 0 0 1 1 1 3934.9 20558 1581 19791 47614;47615 55163;55164 55164 2 VEAQVYILSK Unmodified 1148.6441 0.64412484 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 10.5 2.5 1 1 67.542 67.542 2 2.6203E-05 24622 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.66 58.383 0 0 48.098 37.574 0 59.696 0 0 46 37 0 56 0 0 1 1 0 1 6064.2 20559 2361 19792 47616;47617 55165;55166 55166 2 VEAVYVLGTQLWTDVYSAAPAGAK Unmodified 2508.29 0.2900406 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 10 0 1 104.04 104.04 4 5.2684E-10 33449 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.684 40.463 0 0 15.148 0 0 9.594 0 0 14 0 0 9 0 0 1 0 0 1 1704.3 20560 1893 19793 47618 55167 55167 1 VECQSHR Unmodified 914.40285 0.40284871 3399 Q9Z2U0;A0A338P7D7 Psma7 Proteasome subunit alpha type-7 yes no 0 0 0 0 4.5 0.5 1 1 17.646 17.646 3 0.0077966 2443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 102 60.499 0 9.576 0 3.279 0 0 0 9 0 3 0 0 0 1 0 1 0 0 1148.3 20561 3399 19794 47619;47620 55168;55169 55168 2 VECTYISIDQVPR Unmodified 1578.7712 0.77119262 3001 Q9CZC8;D3YXW0 Scrn1 Secernin-1 yes no 0 0 0 0 6 0 1 64.471 64.471 2 1.9154E-05 22147 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.16 81.366 0 19.424 47.369 27.781 0 39.442 0 19 46 28 0 37 0 1 1 1 0 1 3669.6 20562 3001 19795 47621 55170 55170 1 VECVGSEGASEGIVLPLVSSNSGPR Unmodified 2499.2275 0.22751669 2077 Q60625 Icam5 Intercellular adhesion molecule 5 yes yes 0 0 0 0 5 0 1 75.167 75.167 3 0.045924 27741 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 26.211 9.6125 49.358 0 0 29.749 45.439 38.145 46 0 0 28 46 37 1 0 0 1 1 1 3829.7 20563 2077 19796 47622 55171 55171 1 VEDLTFTSPFCLQVK Unmodified 1782.8862 0.88622238 244 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7;A0A140LJ70;A0A140LHS4 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 0 8 0 1 86.969 86.969 4 0.045189 31374 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.275 9.7422 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 817.31 20564 244 19797 47623 55172 55172 1 VEDNFEDIITKPPVR Unmodified 1770.9152 0.91521432 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 1 8 3.56 1 1 1 68.43 68.43 3 5.6863E-08 24993 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.513 59.366 109 35.972 44.808 119.75 0 0 102 37 46 112 0 0 2 1 1 2 0 0 14500 20565 2646 19798 47624;47625;47626 55173;55174;55175 55175 3 VEDVEALDQK Unmodified 1144.5612 0.56118307 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 3.6 1.02 1 1 2 1 58.88 58.88 2;3 3.3915E-06 20523 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 128.91 70.946 789.8 780.2 462.89 721.85 602.02 695.9 740 780 459 692 617 660 5 6 4 7 6 5 93017 20566 2555 19799 47627;47628;47629;47630;47631 55176;55177;55178;55179;55180;55181;55182;55183;55184;55185 55183 10 VEEAEPEEFVVEK Unmodified 1532.7246 0.72461959 3141 Q9DCC5;P23198;D3Z313;D3Z1A9 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 0 2 0 1 65.815 65.815 3 0.0010413 23518 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 61.212 40.549 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 3019.7 20567 3141 19800 47632 55186 55186 1 VEEAYDLAR Unmodified 1064.5138 0.51383895 1243 O55234;Q8BTY5 Psmb5 Proteasome subunit beta type-5 yes no 0 0 0 0 3.5 0.5 1 1 53.444 53.444 2 3.2375E-05 17929 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 139.74 85.19 127.63 155.68 165.13 125.34 66.371 47.142 120 157 167 120 65 46 1 2 2 1 1 1 31325 20568 1243 19801 47633;47634 55187;55188 55188 2 VEEEAAQK Unmodified 902.43453 0.434526 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 3 0 1 38.856 38.856 2 0.01236 11561 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 89.698 28.938 39.105 56.067 52.677 97.739 40.957 77.715 37 56 56 93 46 74 1 1 1 1 1 1 4980.3 20569 2696 19802 47635 55189 55189 1 VEEEDRR Unmodified 931.43592 0.43592298 3345;369 A0A286YDY4;A0A286YCY1;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 1 13 0 1 21.723 21.723 3 0.029567 3172 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.415 25.854 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1228.2 20570 369;3345 19803 47636 55190 55190 1 VEEEEER Unmodified 918.39306 0.39305511 1974;2696 Q8VDD5;A0A2R8VKI5;Q3UH59;Q61879;Q5SV64 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 13 0 1 28.608 28.608 2 0.027671 5960 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.093 4.9064 0 0 30.296 0 38.702 0 0 0 28 0 37 0 0 0 1 0 1 0 2990.9 20571 2696;1974 19804 47637 55191 55191 1 VEEEIVTLR Unmodified 1086.5921 0.59208927 524 F6VQ81;V9GWU5;Q3TUJ9;Q8BKP1;Q3TAI4;A2AUD5;Q9CYZ2 Tpd52l2 Tumor protein D54 yes no 0 0 0 0 3 0 1 60.522 60.522 2 0.0023048 21500 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 95.608 54.381 39.366 66.506 0 48.946 70.832 125.9 37 65 0 46 74 120 1 1 0 1 1 1 6519.1 20572 524 19805 47638 55192 55192 1 VEEESITK Unmodified 933.46549 0.46549177 761;3358 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;F6RCU2;Q9Z0H8 Clip1;Clip2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 no no 0 0 0 0 4 0 1 46.473 46.473 2 0.015682 14588 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.168 35.593 69.288 0 76.812 65.245 64.993 0 65 0 74 65 65 0 1 0 1 1 1 0 4056.2 20573 761;3358 19806 47639 55193 55193 1 VEEFLYEK Unmodified 1055.5175 0.51752734 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 7.75 3.11 1 1 1 1 69.361 69.361 2;3 0.0067608 25467 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.954 30.805 118.13 92.6 170.41 179.85 296.83 162.34 111 93 168 177 297 157 3 3 3 4 5 2 23511 20574 533 19807 47640;47641;47642;47643 55194;55195;55196;55197;55198 55198 5 VEEFSLPDALNEGQVQVR Unmodified 2029.0116 0.011633904 1941 Q8VDQ1;Q3TXN1;D6RGL6 Ptgr2 Prostaglandin reductase 2 yes no 0 0 0 0 4 0 1 76.571 76.571 3 1.8841E-08 28428 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.143 51.663 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20575 1941 19808 47644 55199 55199 1 VEEHEETFEEK Unmodified 1404.6045 0.60450445 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 4 3.78 1 2 2 1 1 43.283 43.283 3;4 1.8933E-26 12122 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 181.31 126.66 563.81 505.48 603.73 485.78 740.93 480.94 530 516 599 480 741 467 5 6 6 7 5 3 284730 20576 154 19809 47645;47646;47647;47648;47649;47650;47651 55200;55201;55202;55203;55204;55205;55206;55207;55208 55200 9 VEEHSPLER Unmodified 1094.5356 0.53563702 403 A0A2U3TZ49;D3Z3Z3;P54285 Cacnb3 Voltage-dependent L-type calcium channel subunit beta-3 yes no 0 0 0 0 3 0 1 35.641 35.641 3 0.045263 9944 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 41.399 18.38 0 9.576 0 0 0 29.848 0 9 0 0 0 28 0 1 0 0 0 1 2679.1 20577 403 19810 47652 55209 55209 1 VEELEDQGQTLANVFILR Unmodified 2073.0742 0.074234161 954 Q8CHT1;E9QK62;F6SWQ9 Ngef Ephexin-1 yes no 0 0 0 0 5 0 1 90.769 90.769 3 5.4908E-06 34492 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.918 38.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20578 954 19811 47653 55210 55210 1 VEELEQELAR Unmodified 1214.6143 0.61428128 2704 Q8VE47;F6VRI6;D6RH76 Uba5 Ubiquitin-like modifier-activating enzyme 5 yes no 0 0 0 0 3 0 1 66.809 66.809 2 0.0046654 24344 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.533 35.993 0 18.897 78.902 25.018 46.967 0 0 19 75 28 46 0 0 1 1 1 1 0 2937.3 20579 2704 19812 47654 55211 55211 1 VEELLAEAR Unmodified 1028.5502 0.55022446 3300 Q9R0N0 Galk1 Galactokinase yes yes 0 0 0 0 5 0 1 66.466 66.466 2 0.0020884 23682 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 108.74 49.393 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20580 3300 19813 47655 55212 55212 1 VEELPGDNGVEFTQDDSVK Unmodified 2076.9488 0.94875888 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 2.33 0.471 2 1 68.11 68.11 3 4.2982E-05 24603 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 55.516 40.587 0 9.2416 20.004 0 28.62 19.437 0 9 19 0 28 19 0 1 1 0 1 1 3094.6 20581 2319 19814 47656;47657;47658 55213;55214;55215 55215 3 VEELPGDNGVEFTQDDSVK Deamidation (N) 2077.9328 0.93277446 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 1 0 0 3 0 1 69.242 69.242 3 1.6278E-06 25531 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 71.073 60.018 29.952 18.196 0 0 38.761 28.742 28 19 0 0 38 28 1 1 0 0 1 1 2700 20582 2319 19814 47659 55216 55216 911 1 VEELPGDNGVEFTQDDSVKK Unmodified 2205.0437 0.043721893 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 1 3.5 0.5 1 1 62.489 62.489 4 1.2347E-05 22078 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.055 41.746 39.522 0 30.097 49.416 74.467 19.437 37 0 28 46 74 19 1 0 1 1 2 1 5302.7 20583 2319 19815 47660;47661 55217;55218 55218 2 VEEQHTNK Unmodified 983.46722 0.46722311 2939 Q9CQR4 Acot13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 0 9 4 1 1 27.062 27.062 3 0.0021183 5250 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.027 64.723 39.265 129.85 29.928 32.118 152.09 66.579 37 125 32 32 149 65 1 2 1 1 2 1 8295.4 20584 2939 19816 47662;47663 55219;55220 55219 2 VEESEGNLR Unmodified 1031.4884 0.48835248 2559 Q8CJ40 Crocc Rootletin yes yes 0 0 0 0 2 0 1 36.659 36.659 2 0.017861 10252 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 66.962 38.788 59.371 54.335 74.514 44.774 56.519 0 56 56 74 46 56 0 1 1 1 1 1 0 4240 20585 2559 19817 47664 55221 55221 1 VEESSWLIEDGK Unmodified 1390.6616 0.6616254 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 5 0 1 68.608 68.608 3 0.00067883 24718 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.091 29.205 48.752 55.377 55 45.436 83.128 46.664 46 56 56 46 83 46 1 1 1 1 1 1 5329 20586 1207 19818 47665 55222 55222 1 VEEVAVK Unmodified 772.43307 0.43306943 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 4.5 0.5 1 1 48.855 48.855 2 0.0062063 15456 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 132.09 21.482 230.33 0 242.4 199.25 216.14 215.56 216 0 231 204 220 208 1 0 1 2 1 1 21084 20587 154 19819 47666;47667 55223;55224 55224 2 VEEVEEDSEVLATEK Unmodified 1704.7942 0.79415571 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 1.5 0.5 1 1 68.242 68.242 3 1.7274E-05 24748 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 76.759 58.842 50.339 18.196 0 0 67.313 19.706 47 19 0 0 65 19 2 1 0 0 2 1 3181.9 20588 3322 19820 47668;47669 55225;55226 55226 2 VEFDTFGELK Unmodified 1183.5761 0.57610486 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 74.803 74.803 3 7.5061E-06 28194 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.09 78.089 198.35 187.6 163.41 164.91 218.7 182.44 186 186 158 158 222 176 4 3 4 3 4 4 41634 20589 1857 19821 47670;47671;47672;47673 55227;55228;55229;55230;55231 55231 5 VEFEELCADLFDR Unmodified 1641.7345 0.73447277 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 0 4 0 1 87.713 87.713 2 0.00073853 33264 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 72.34 17.732 0 23.576 0 0 9.414 0 0 23 0 0 9 0 0 2 0 0 1 0 965.23 20590 3234 19822 47674 55232;55233 55232 2 VEFMDDTSR Unmodified 1098.4652 0.4651742 1071 G3UYV7;P62858 Rps28 40S ribosomal protein S28 yes no 0 0 0 0 4.5 0.5 1 1 54.323 54.323 2 2.9635E-05 18313 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 143.37 111.02 0 0 46.731 68.26 0 0 0 0 46 65 0 0 0 0 1 1 0 0 7500.3 20591 1071 19823 47675;47676 55234;55235 55234 2 VEFNEDGDRK Unmodified 1207.5469 0.54692999 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 1 13 0 1 41.683 41.683 3 0.05133 12280 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 47.062 14.808 118.35 0 126.03 72.103 67.385 195.29 111 0 120 74 74 185 1 0 1 1 1 1 6839.7 20592 468 19824 47677 55236 55236 1 VEFSGNPSK Unmodified 963.46616 0.46616048 2038 Q56A07 Scn2b Sodium channel subunit beta-2 yes yes 0 0 0 0 7 0 1 48.506 48.506 2 0.011507 13779 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.499 15.641 54.173 24.947 71.313 35.354 44.485 58.427 51 28 69 37 46 56 1 1 1 1 1 1 3480.8 20593 2038 19825 47678 55237 55237 1 VEGAFPVTMLPGDGVGPELMHAVK Unmodified 2450.2338 0.23378805 2734 Q91VA7 Idh3b Isocitrate dehydrogenase [NAD] subunit, mitochondrial yes yes 0 0 0 0 10 3 1 1 84.223 84.223 3;4 1.352E-10 32647 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 67.364 56.115 29.807 46.934 0 39.196 66.189 0 28 46 0 37 65 0 1 1 0 1 1 0 4529.4 20594 2734 19826 47679;47680 55238;55239 55239 2 VEGELEEMER Unmodified 1219.5391 0.53906742 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 1.5 0.5 1 1 56.278 56.278 2 0.00010649 17821 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.88 77.364 49.236 19 20.51 0 0 29.848 46 19 19 0 0 28 2 1 1 0 0 1 24741 20595 1974 19827 47681;47682 55240;55241;55242 55241 3 VEGEPQK Unmodified 785.39193 0.3919329 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 4 0 1 37.588 37.588 2 0.045499 10497 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.741 38.095 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 3956 20596 732 19828 47683 55243 55243 1 VEGFPTIYFAPSGDKK Unmodified 1754.8879 0.88793694 193 A0A0R4J0Z1;P08003 Pdia4 Protein disulfide-isomerase A4 yes no 0 0 0 1 9 0 1 71.973 71.973 3 0.001885 23601 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 52.42 33.689 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 3493.7 20597 193 19829 47684 55244 55244 1 VEGGTPLFTLR Unmodified 1188.6503 0.65027285 3049 Q9D2G2 Dlst Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 9.33 2.62 1 1 1 67.582 67.582 2 5.3928E-10 22907 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.98 76.014 267.24 378.47 468.55 236.28 426.54 357.35 252 380 465 241 419 343 2 3 3 2 2 2 81945 20598 3049 19830 47685;47686;47687 55245;55246;55247 55245 3 VEGHVFPEFK Unmodified 1187.5975 0.597509 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;B1ATY9 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 6 0 1 59.065 59.065 3 0.0056685 19609 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.348 22.124 48.685 34.687 83.66 85.733 0 59.696 46 37 83 83 0 56 1 1 1 1 0 1 6952.8 20599 589 19831 47688 55248 55248 1 VEGPEEIR Unmodified 927.46616 0.46616048 2665 Q8R4N0 Clybl Citrate lyase subunit beta-like protein, mitochondrial yes yes 0 0 0 0 2 0 1 42.047 42.047 2 0.015932 12704 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 82.716 26.702 69.57 34.677 0 0 0 49.036 65 37 0 0 0 46 1 1 0 0 0 1 11715 20600 2665 19832 47689 55249 55249 1 VEGSEPSVTYYR Unmodified 1385.6463 0.64630969 2946 Q9CQX2 Cyb5b Cytochrome b5 type B yes yes 0 0 0 0 7.33 4.03 1 1 1 49.065 49.065 2 4.353E-32 15574 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.14 128.39 0 59.002 34.785 38.368 0 39.442 0 56 37 37 0 37 0 1 1 1 0 1 11770 20601 2946 19833 47690;47691;47692 55250;55251;55252 55252 3 VEGSEPTTPFNLFIGNLNPNK Unmodified 2287.1485 0.14846174 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 11.7 1.89 1 2 89.489 89.489 3;4 3.5527E-07 35465 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.578 46.827 20.129 37.824 94.509 84.092 166.99 66.921 19 38 93 84 168 65 1 2 3 3 4 2 11285 20602 1333 19834 47693;47694;47695 55253;55254;55255;55256 55255 4 VEGTHTPR Unmodified 895.45118 0.45117911 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 4.5 0.5 1 1 23.158 23.158 3 0.0024413 3623 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.355 62.101 20.144 28.149 17.011 39.427 0 20.254 19 28 19 37 0 19 1 1 1 1 0 1 2541 20603 2594 19835 47696;47697 55257;55258 55258 2 VEGTPNDPNPNDPR Unmodified 1520.6855 0.68554874 2807 Q922H4 Gmppa Mannose-1-phosphate guanyltransferase alpha yes yes 0 0 0 0 2 0 1 38.2 38.2 2 0.0067874 11070 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 57.492 22.078 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 1306.2 20604 2807 19836 47698 55259 55259 1 VEHTSQGAK Unmodified 955.47231 0.47230849 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 5.5 0.5 1 1 26.447 26.447 3 0.010712 4473 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.982 17.423 0 48.678 15.908 38.83 53.77 88.01 0 46 19 37 56 84 0 1 1 1 2 2 3863.5 20605 3331 19837 47699;47700 55260;55261 55261 2 VEIATLTR Unmodified 901.52328 0.52328142 3310 Q9R1P0 Psma4 Proteasome subunit alpha type-4 yes yes 0 0 0 0 6 0 1 55.256 55.256 2 0.060762 17844 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.589 20.943 0 86.304 120.11 102.13 116.88 114.99 0 83 120 102 120 111 0 1 1 1 1 1 9674.9 20606 3310 19838 47701 55262 55262 1 VEIEAIAVQGPFIK Unmodified 1512.8552 0.85518025 1611 P52760 Hrsp12 Ribonuclease UK114 yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 82.468 82.468 2;3 2.3884E-14 29909 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.93 62.011 59.729 0 60.394 0 47.137 77.539 56 0 56 0 46 74 2 0 1 0 1 2 10904 20607 1611 19839 47702;47703;47704;47705;47706 55263;55264;55265;55266;55267 55264 5 VEIIANDQGNR Deamidation (N) 1228.6048 0.60477922 1762;1419;1397;1407;1394 P17156;P63017;Q504P4;D3Z5E2;Q61696;P17879;P16627;P20029 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l;Hspa5 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein no no 0 1 0 0 4.5 0.957 1 2 2 1 50.826 50.826 2 9.3327E-07 16740 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.99 54.684 367.25 80.257 97.515 108.28 283.5 252.94 343 84 93 102 278 241 7 3 3 3 6 5 50379 20608 1397;1762;1407;1394;1419 19840 47707;47708;47709;47710;47711;47712 55268;55269;55270;55271;55272;55273;55274;55275 55270 462;463 8 VEIIANDQGNR Unmodified 1227.6208 0.62076364 1762;1419;1397;1407;1394 P17156;P63017;Q504P4;D3Z5E2;Q61696;P17879;P16627;P20029 Hspa2;Hspa8;Hspa1a;Hspa1b;Hspa1l;Hspa5 Heat shock-related 70 kDa protein 2;Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1-like;78 kDa glucose-regulated protein no no 0 0 0 0 7 3.16 1 1 1 1 1 48.39 48.39 2 7.1218E-66 15232 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 217.45 156.56 365.38 675.47 382.36 778.83 480.26 657.36 343 664 396 738 501 627 5 8 4 7 5 6 338270 20609 1397;1762;1407;1394;1419 19840 47713;47714;47715;47716;47717 55276;55277;55278;55279;55280;55281;55282;55283 55282 8 VEILAPPNGSVPGDRITFDAFPGEPDK Unmodified 2837.4236 0.42357396 1494 Q3UZG4;P31230 Aimp1 Aminoacyl tRNA synthase complex-interacting multifunctional protein 1;Endothelial monocyte-activating polypeptide 2 yes no 0 0 0 1 9 0 1 58.098 58.098 5 0.060404 17029 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 24.096 10.64 0 68.053 66.247 0 83.862 86.085 0 65 65 0 83 83 0 1 1 0 1 1 5437.4 20610 1494 19841 47718 55284 55284 1 VEILCEHPR Unmodified 1151.5757 0.5757277 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 0 0 0 0 13 0 1 45.098 45.098 3 0.0094331 13911 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 56.359 17.337 349.32 381.28 478.44 365.48 437.47 326.5 330 388 480 368 445 318 1 1 1 1 1 1 8398.8 20611 2709 19842 47719 55285 55285 1 VEILNEHR Unmodified 1008.5352 0.53524309 890 Q3U763;E9Q2X6;Q8CG47 Smc4 Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 4 yes no 0 0 0 0 5 0 1 43.169 43.169 3 0.0069181 12691 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.628 0 20.212 0 29.347 19.018 0 0 19 0 28 19 0 0 1 0 1 1 0 0 4944.3 20612 890 19843 47720 55286 55286 1 VELEQTYQAK Unmodified 1207.6085 0.60846762 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 5 0 1 53.933 53.933 3 0.0004156 17774 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.298 52.577 49.225 26.473 0 30.104 26.577 38.684 46 28 0 28 28 37 1 1 0 1 1 1 4567.6 20613 182 19844 47721 55287 55287 1 VELFGLGITYDQASTK Unmodified 1740.8934 0.89341625 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 83.972 83.972 3 3.7697E-33 29908 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 148.18 114.88 108.91 201.01 171.63 158.76 281.5 107.18 102 196 175 157 278 102 2 3 3 3 3 2 51884 20614 1424 19845 47722;47723;47724;47725 55288;55289;55290;55291 55289 4 VELLLPK Unmodified 810.52149 0.52149051 3015 Q9D023;A0A0A6YY89;E9PY67;Q3V1C1;G5E869 Mpc2;Zfp142 Mitochondrial pyruvate carrier 2 yes no 0 0 0 0 10 0 1 72.404 72.404 2 0.038508 21706 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.597 9.3293 0 0 67.869 55.234 102.57 46.109 0 0 65 56 102 46 0 0 1 1 1 1 3431.8 20615 3015 19846 47726 55292 55292 1 VELNALMTDETISNVPILILGNK Unmodified 2496.3509 0.35092629 2837 Q99JZ4;P36536 Sar1a GTP-binding protein SAR1a yes no 0 0 0 0 13 0 1 102.09 102.09 4 0.0023543 41352 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 39.647 25.632 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 1055 20616 2837 19847 47727 55293 55293 1 VELPLEDQVGDLEALSEK Unmodified 1983.0048 0.0048171915 3322 Q9WTQ5 Akap12 A-kinase anchor protein 12 yes yes 0 0 0 0 4 0 1 88.231 88.231 3 0.013095 33422 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 36.856 21.09 0 0 0 0 14.145 14.52 0 0 0 0 14 14 0 0 0 0 1 1 722.9 20617 3322 19848 47728 55294 55294 1 VELQELNDR Unmodified 1114.5619 0.56185177 1423;1493 P20152;A0A0A6YWC8;A2AKJ2;P31001 Vim;Des Vimentin;Desmin no no 0 0 0 0 4 0 1 53.279 53.279 3 0.0021903 17852 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.056 42.043 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20618 1423;1493 19849 47729 55295 55295 1 VELSVGESK Unmodified 946.49713 0.49712625 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 5 0 1 53.975 53.975 2 0.00090464 17848 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.61 15.354 49.026 65.854 0 50.278 0 39.442 46 65 0 46 0 37 1 1 0 1 0 1 2759.1 20619 1180 19850 47730 55296 55296 1 VELVPPTPAEIPTAIQSVK Unmodified 1988.1194 0.11939344 2895 Q9CPQ8 Atp5l ATP synthase subunit g, mitochondrial yes yes 0 0 0 0 6.75 0.829 2 1 1 83.196 83.196 3;4 2.1765E-07 30931 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.155 40.852 146.82 121.81 113.56 189.47 36.779 138.06 139 121 112 177 38 130 4 5 3 5 2 5 32194 20620 2895 19851 47731;47732;47733;47734 55297;55298;55299;55300;55301;55302;55303 55298 7 VEMLEIIEAIYK Unmodified 1449.7789 0.77890376 1737 P62761 Vsnl1 Visinin-like protein 1 yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 102.58 102.58 3 2.7829E-08 41532 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.24 78.672 114.39 138.11 104.03 51.162 188.3 187.99 107 138 98 48 185 181 3 5 4 3 4 6 48155 20621 1737 19852 47735;47736;47737;47738;47739 55304;55305;55306;55307;55308;55309;55310;55311;55312;55313 55312 10 VENALNNLDDNPSPGDR Unmodified 1838.8395 0.8394832 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 4 0 1 57.219 57.219 3 5.6324E-05 19735 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.874 54.958 0 38.759 36.442 28.432 0 0 0 37 37 28 0 0 0 1 1 1 0 0 3135.6 20622 490 19853 47740 55314 55314 1 VENFIHK Unmodified 885.47085 0.47085192 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 10 2.16 1 1 1 52.018 52.018 3 0.034585 17065 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.531 13.551 346.75 180.63 179.13 318.41 285.58 337.23 325 186 176 306 290 324 3 2 2 3 2 3 39241 20623 1148 19854 47741;47742;47743 55315;55316;55317 55317 3 VENHYDFQDIASVVALTQTYATAEPFIDAK Unmodified 3355.6249 0.62485255 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 8.75 2.49 2 1 1 97.884 97.884 4;5 3.2337E-26 39329 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.726 74.757 117.44 85.925 93.002 85.301 99.597 84.877 110 87 92 84 100 81 3 3 4 4 3 3 37452 20624 2173 19855 47744;47745;47746;47747 55318;55319;55320;55321;55322 55321 5 VENILLHDR Unmodified 1107.6037 0.60365701 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 9.5 3.5 1 1 52.997 52.997 3 0.00032495 16997 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.53 51.662 144.66 139.34 113.58 154.2 42.48 226.91 139 139 111 148 46 214 3 3 1 3 1 3 15034 20625 1983 19856 47748;47749 55323;55324;55325;55326 55325 4 VENNDLVIAR Unmodified 1141.6091 0.60913632 3241 Q9JLB0;E9PWC5 Mpp6 MAGUK p55 subfamily member 6 yes no 0 0 0 0 4 0 1 51.295 51.295 2 0.03931 16918 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.584 11.557 39.701 0 0 48.888 73.876 37.334 37 0 0 46 74 37 1 0 0 1 1 1 5414.5 20626 3241 19857 47750 55327 55327 1 VENQENVSNLVIDDTELK Unmodified 2058.0117 0.011693483 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 0 0 0 5.8 3.66 1 2 1 1 72.422 72.422 3;4 1.9731E-53 26998 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 166.77 143.9 139.6 142.03 95.579 116.09 132.41 117.26 131 139 93 111 130 111 3 3 2 2 3 2 68774 20627 1536 19858 47751;47752;47753;47754;47755 55328;55329;55330;55331;55332 55328 5 VENQENVSNLVIDDTELK Deamidation (N) 2058.9957 0.99570907 1536 P40124 Cap1 Adenylyl cyclase-associated protein 1 yes yes 0 1 0 0 3 0 1 74.367 74.367 3 0.0029807 27980 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.688 29.55 20.332 0 9.2218 9.2874 0 0 19 0 9 9 0 0 1 0 1 1 0 0 1882.1 20628 1536 19858 47756 55333 55333 573 1 VENRPFLSK Unmodified 1088.5978 0.59784335 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 0 0 1 8.5 0.5 1 1 47.59 47.59 3 0.017632 11936 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.49 28.16 604.08 428.13 721.77 227.81 589.49 317.63 569 452 703 226 584 308 2 2 2 1 2 1 55778 20629 765;987 19859 47757;47758 55334;55335 55335 2 VENSNPTANTEQTVK Unmodified 1630.7798 0.77984305 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 4 0 1 43.178 43.178 3 0.0036659 13002 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.64 26.082 0 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 2649.5 20630 82 19860 47759 55336 55336 1 VEPAVSSIVNSIQVLASK Unmodified 1840.0306 0.030578432 529 A2AVJ7;Q99PL5 Rrbp1 Ribosome-binding protein 1 yes no 0 0 0 0 12 0 1 96.938 96.938 3 1.6607E-07 27718 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.04 73.501 0 24.472 0 0 23.385 19.587 0 23 0 0 23 19 0 1 0 0 1 1 1294.7 20631 529 19861 47760 55337 55337 1 VEPGELR Unmodified 798.42357 0.42356738 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 3.5 0.5 1 1 41.363 41.363 2 0.027409 12677 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.262 24.83 158.2 0 160.34 220.37 211.42 310.57 148 0 158 214 222 297 1 0 2 2 2 2 18534 20632 3194 19862 47761;47762 55338;55339 55338 2 VEPGSTCAVFGLGGVGLAVIMGCK Unmodified 2378.1796 0.17964398 1474 P28474 Adh5 Alcohol dehydrogenase class-3 yes yes 0 0 0 0 10.5 0.5 1 1 98.862 98.862 3 4.9693E-07 32532 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.093 41.409 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 2013.8 20633 1474 19863 47763;47764 55340;55341 55341 2 VEPPKEEPK Unmodified 1051.555 0.55497548 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 1 9 4 1 1 41.213 41.213 3 0.032333 11939 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.461 16.44 196.28 309.81 342.79 318.06 76.232 378.39 185 309 348 311 83 357 1 2 2 2 1 2 34064 20634 1957 19864 47765;47766 55342;55343 55342 2 VEPQATISEIK Unmodified 1213.6554 0.65541781 1057 G3UWE1;Q52L67;Q9CY27 Tecr Very-long-chain enoyl-CoA reductase yes no 0 0 0 0 5 0 1 59.436 59.436 3 0.005898 20441 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.693 13.427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2231.7 20635 1057 19865 47767 55344 55344 1 VEPVDASGTEK Unmodified 1130.5455 0.54553301 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 4 0 1 45.585 45.585 2 1.6823E-07 14135 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 108.43 63.35 80.083 33.339 37.63 0 37.054 47.979 75 37 37 0 37 46 1 1 1 0 1 1 6402.9 20636 1958 19866 47768 55345 55345 1 VEPYSSTAQVQFDEPEATGGVPILK Unmodified 2661.3174 0.31737756 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 7 3.54 1 1 1 1 77.887 77.887 3;4 1.7377E-16 29094 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.036 51.836 156.8 94.875 76.031 130.05 0 78.884 147 93 74 120 0 74 4 2 3 2 0 2 50835 20637 71;74;949;1367 19867 47769;47770;47771;47772 55346;55347;55348;55349 55347 4 VEQATKPSFESGR Unmodified 1434.7103 0.71030693 385;3339 A0A2I3BRL8;Q91VM5;Q9WV02;A2AFI3;A2AFI4 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 1 9.5 3.5 1 1 43.723 43.723 3 0.00030967 12560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 77.204 61.406 216.16 0 278.61 230.7 275.55 134.99 203 0 268 231 278 130 2 0 2 2 2 1 18972 20638 385;3339 19868 47773;47774 55350;55351 55350 2 VEQDLAMGTDAEGEK Oxidation (M) 1607.6985 0.69848119 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 1 0 2 0 1 52.719 52.719 3 1.8137E-07 17330 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 113.47 93.367 33.888 21.229 57.296 41.552 49.949 43.347 32 23 56 42 51 42 1 1 1 1 1 1 8790.9 20639 1160 19869 47775 55352 55352 58 1 VEQDLAMGTDAEGEK Unmodified 1591.7036 0.70356657 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 5.38 4.44 2 3 1 2 58.54 58.54 2;3;4 4.9537E-08 20344 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.29 94.185 365.59 344.14 382.02 509.72 462.73 514.49 343 342 380 492 464 492 7 7 7 9 7 7 180600 20640 1160 19869 47776;47777;47778;47779;47780;47781;47782;47783 55353;55354;55355;55356;55357;55358;55359;55360;55361;55362;55363 55361 11 VEQFVHK Unmodified 885.47085 0.47085192 2616 Q8K4R4;A0A0A0MQ88;X1WI19 Pitpnc1 Cytoplasmic phosphatidylinositol transfer protein 1 yes no 0 0 0 0 7 0 1 48.819 48.819 3 0.038857 13961 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.166 14.928 49.026 65.854 0 38.879 83.063 57.326 46 65 0 37 83 56 1 1 0 1 1 1 2960.9 20641 2616 19870 47784 55364 55364 1 VEQGDAAPLLR Acetyl (Protein N-term) 1209.6354 0.63535107 1982 Q3UHG7 Lchn Protein LCHN yes yes 1 0 0 0 2 0 1 63.636 63.636 2 0.0062002 22523 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.735 43.563 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1897.8 20642 1982 19871 47785 55365 55365 1 VEQGGER Unmodified 773.36678 0.36678078 935 E9Q8N8;O88343;A7E1Z5;D3Z7G8 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 3 0 1 22.154 22.154 2 0.027104 3804 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.629 44.95 49.176 36.052 0 0 61.282 43.023 46 37 0 0 60 42 1 1 0 0 1 1 6541.2 20643 935 19872 47786 55366 55366 1 VEQHVVDGK Unmodified 1009.5193 0.51925868 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 5 0 1 38.483 38.483 3 0.0038243 10408 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.5 33.18 88.033 61.207 120.64 114.13 0 148.17 83 65 120 111 0 139 1 1 1 1 0 1 6751.4 20644 2862 19873 47787 55367 55367 1 VEQIAAIAQELNELDYYDSHNVNTR Unmodified 2904.389 0.38897937 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 6 0 1 89.132 89.132 4 6.3477E-12 33684 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.689 61.156 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1693.5 20645 310 19874 47788 55368 55368 1 VEQIAAIAQELNELDYYDSPSVNAR Unmodified 2807.3614 0.36136764 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 6 0.707 1 2 1 97.574 97.574 3;4 3.8498E-20 35706 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.362 69.53 9.612 18.504 0 17.183 16.198 14.924 9 18 0 16 16 14 1 2 0 3 2 1 7778.7 20646 418 19875 47789;47790;47791;47792 55369;55370;55371;55372 55369 4 VEQLGAEGNVEESQK Unmodified 1615.7689 0.76894402 922 E9Q715;Q05CX5;Q7TNC4 Luc7l2 Putative RNA-binding protein Luc7-like 2 yes no 0 0 0 0 4 0 1 51.125 51.125 3 0.00067714 16828 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.209 38.055 49.026 65.854 0 0 0 0 46 65 0 0 0 0 1 1 0 0 0 0 2022.3 20647 922 19876 47793 55373 55373 1 VEQSAER Unmodified 817.393 0.39299553 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 2 0.816 1 1 1 24.667 24.667 2 0.0051139 4883 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 146.27 16.702 278.46 460.95 237.92 443.43 484.08 296.54 263 452 265 427 492 287 3 2 3 3 3 2 125260 20648 1203;3123 19877 47794;47795;47796 55374;55375;55376 55376 3 VEQVLSLEPQHELK Unmodified 1647.8832 0.88318591 2399 Q8BH80;Q9QY76 Vapb Vesicle-associated membrane protein-associated protein B yes no 0 0 0 0 6 0 1 64.446 64.446 3 5.4358E-11 22106 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.541 48.488 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20649 2399 19878 47797 55377 55377 1 VESDWTIELP Unmodified 1187.571 0.57101948 1443 Q8CBC8;P24288 Bcat1 Branched-chain-amino-acid aminotransferase;Branched-chain-amino-acid aminotransferase, cytosolic yes no 0 0 0 0 7.33 4.03 1 1 1 91.009 91.009 2 0.012028 33886 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.565 44.785 6.3919 48.045 85.64 139.92 25.388 69.632 6 46 82 133 26 66 1 3 4 5 2 5 7113.1 20650 1443 19879 47798;47799;47800 55378;55379;55380;55381;55382;55383 55378 6 VESLEEEIQFLR Unmodified 1490.7617 0.76167379 1304 P03995 Gfap Glial fibrillary acidic protein yes yes 0 0 0 0 4.5 0.5 1 1 82.848 82.848 3 0.00059031 31314 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.55 41.324 0 0 9 0 0 9 0 0 9 0 0 9 0 0 1 0 0 1 1897.6 20651 1304 19880 47801;47802 55384;55385 55384 2 VESLEQEAANER Unmodified 1373.6423 0.64228694 384 A0A2I3BQZ9;P12023;A0A2I3BPT1;Q3TWF3;A0A2I3BR03 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 0 5.25 4.49 1 2 1 51.246 51.246 2;3 2.9104E-18 17341 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 150.51 110.45 179.21 145.11 80.054 165.13 148.72 146.36 168 149 84 158 149 139 4 5 3 5 3 3 34902 20652 384 19881 47803;47804;47805;47806 55386;55387;55388;55389;55390 55388 5 VESLSYQLLGLQK Unmodified 1476.8188 0.81879474 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 10 0.816 1 1 1 81.122 81.122 3 5.9278E-06 27852 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.65 76.843 49.176 36.052 68.272 153.42 0 118.33 46 37 65 148 0 111 1 1 1 3 0 2 34300 20653 182 19882 47807;47808;47809 55391;55392;55393 55391 3 VESTSVGSISPGGAK Unmodified 1374.6991 0.69907354 3345;369 A0A286YDY4;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 7.4 2.87 1 2 1 1 51.428 51.428 2;3 8.3555E-17 16015 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 132.5 78.436 108.13 197.28 233.1 124.44 194.97 234.09 102 195 232 121 195 223 1 2 4 2 3 3 39380 20654 369;3345 19883 47810;47811;47812;47813;47814 55394;55395;55396;55397;55398 55396 5 VESVFETLVEDSPEEESTLTK Unmodified 2367.1217 0.12169744 3234 Q9JKR6 Hyou1 Hypoxia up-regulated protein 1 yes yes 0 0 0 0 4 0 1 91.542 91.542 4 3.5856E-07 33946 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.648 46.706 6.408 5.9519 0 0 0 6.396 6 6 0 0 0 6 1 1 0 0 0 1 1321.8 20655 3234 19884 47815 55399 55399 1 VETETVLSFVDDIISGAK Unmodified 1921.9884 0.98843885 2110 Q61137;A0A0A6YWE6;A0A0A6YVT7 Astn1 Astrotactin-1 yes no 0 0 0 0 10 3 1 1 111.04 111.04 3 4.3357E-08 37706 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.97 55.432 2.146 0 0 4.2773 11.034 0 2 0 0 4 11 0 1 0 0 1 2 0 1237.2 20656 2110 19885 47816;47817 55400;55401 55400 2 VETFSGVYK Unmodified 1028.5179 0.51786169 996 F6SVV1;P62082 Gm9493;Rps7 40S ribosomal protein S7 yes no 0 0 0 0 9.25 2.28 1 1 1 1 59.216 59.216 2;3 3.5352E-05 18286 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.79 92.545 187.68 202.02 142.16 78.766 112.49 243.02 176 204 139 74 111 232 3 4 2 2 2 3 26078 20657 996 19886 47818;47819;47820;47821 55402;55403;55404;55405;55406 55404 5 VETGILRPGMVVTFAPVNITTEVK Unmodified 2570.4142 0.41419525 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 1 10 0.707 1 2 1 82.44 82.44 3;4 1.9595E-15 28425 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.102 67.347 35.291 29.337 67.296 51.207 51.157 52.906 33 28 66 51 51 51 2 1 3 3 2 2 20369 20658 1729 19887 47822;47823;47824;47825 55407;55408;55409;55410 55407 4 VETGVLKPGMVVTFAPVNVTTEVK Unmodified 2514.3767 0.37674711 1341 P10126 Eef1a1 Elongation factor 1-alpha 1 yes yes 0 0 0 1 10 1.41 3 2 1 79.799 79.799 3;4;5 1.1706E-38 24990 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.51 92.704 187.76 105.46 262.47 138.33 38.702 256.91 176 102 250 130 37 241 3 3 4 2 1 3 116880 20659 1341 19888 47826;47827;47828;47829;47830;47831 55411;55412;55413;55414;55415;55416;55417 55416 7 VETGVLKPGMVVTFAPVNVTTEVK Deamidation (N) 2515.3608 0.3607627 1341 P10126 Eef1a1 Elongation factor 1-alpha 1 yes yes 0 1 0 1 10 0 1 79.899 79.899 4 1.119E-11 24984 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.302 50.687 148.45 137.89 0 219.37 191.75 184.28 139 139 0 204 199 178 1 1 0 1 1 1 23730 20660 1341 19888 47832 55418 55418 416 1 VETLHDFEAANSDELNLQR Unmodified 2200.0396 0.039639568 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 5.5 3.45 2 1 2 1 65.337 65.337 3;4 1.089E-53 23287 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 163.18 146.11 356.32 233.74 200.94 249.44 216.83 329.6 334 241 206 241 223 315 5 4 3 4 3 5 127710 20661 90 19889 47833;47834;47835;47836;47837;47838 55419;55420;55421;55422;55423;55424;55425 55422 7 VETPSLQK Unmodified 900.49165 0.49164694 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 6 0 1 50.736 50.736 2 0.04059 15728 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.464 19.548 59.213 63.609 93.223 73.8 81.128 66.975 56 65 93 74 83 65 1 1 1 1 1 1 3597.1 20662 1999 19890 47839 55426 55426 1 VETTEDLVAK Unmodified 1103.571 0.57101948 3155 Q9DCW4;A0A0U1RQB4 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 8.5 4.5 1 1 56.054 56.054 2;3 0.00025278 19323 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.584 42.216 147.92 146.12 82.664 54.39 204.64 181.78 139 148 83 56 204 176 2 2 1 1 2 2 18371 20663 3155 19891 47840;47841 55427;55428 55427 2 VETVYTYLLDGESR Unmodified 1643.8043 0.80426689 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 10 3 1 1 80.938 80.938 2;3 0.00023993 29021 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.972 43.651 0 29.336 27.275 28.3 36.083 38.412 0 28 28 28 37 37 0 1 1 1 1 1 5376.9 20664 2054 19892 47842;47843 55429;55430 55429 2 VEVDMEK Unmodified 848.39497 0.39496937 1554 P46460;O54941 Nsf;Smarce1 Vesicle-fusing ATPase;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 yes no 0 0 0 0 7 3.54 1 1 1 1 52.603 52.603 2;3 0.01908 17220 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 65.252 36.103 256.47 0 356.5 80.733 98.32 135.77 241 0 334 83 102 130 2 0 2 1 1 1 48710 20665 1554 19893 47844;47845;47846;47847 55431;55432;55433;55434 55434 4 VEVDMEKAESLQVTR Unmodified 1732.8665 0.86654957 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 1 13 0 1 61.352 61.352 3 0.0035416 21833 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.947 33.938 49.074 56.275 0 0 74.072 97.024 46 56 0 0 74 93 1 1 0 0 1 1 4905.8 20666 1554 19894 47848 55435 55435 1 VEVEEDGQLK Unmodified 1144.5612 0.56118307 93;3278 A0A0G2JER9;O54946;F6YRQ2;A0A087WP03;Q9QYI5 Dnajb6;Dnajb2 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 2 no no 0 0 0 0 3.5 0.5 1 1 52.346 52.346 3 8.9678E-05 17359 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.342 53.034 99.252 74.058 27.521 58.916 34.675 68.301 93 74 28 56 37 65 2 1 1 1 1 2 14027 20667 93;3278 19895 47849;47850 55436;55437 55437 2 VEVERDNLAEDIMR Unmodified 1687.8199 0.81993373 1423 P20152;A0A0A6YWC8 Vim Vimentin yes no 0 0 0 1 3 0 1 60.286 60.286 3 2.0497E-10 21432 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 87.727 57.62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20668 1423 19896 47851 55438 55438 1 VEVPVGSFK Unmodified 960.52803 0.52803245 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 63.564 63.564 2 0.0011064 20248 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.247 32.684 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20669 3266 19897 47852 55439 55439 1 VEVTEFEDIK Unmodified 1207.5972 0.59723423 537 Q9EQU5;A2BE93;A2BE92 Set Protein SET yes no 0 0 0 0 6.25 3.96 1 1 1 1 69.098 69.098 3 1.2057E-05 25316 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.79 63.47 88.891 110.89 81.767 106.65 102.12 108.48 83 111 83 103 102 103 1 3 3 4 3 3 29049 20670 537 19898 47853;47854;47855;47856 55440;55441;55442;55443;55444 55444 5 VEYQEDRNDLVISETELK Unmodified 2179.0645 0.064457335 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 1 3.67 0.471 1 2 63.594 63.594 3;4 6.0443E-46 22529 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 159.26 132.45 59.456 89.352 146.2 54.741 159.4 67.219 56 93 139 56 157 65 1 2 2 1 2 1 27060 20671 2996 19899 47857;47858;47859 55445;55446;55447 55447 3 VEYTEEETK Unmodified 1126.503 0.50299949 2542 Q8CGV2 Tph2 Tryptophan 5-hydroxylase 2 yes yes 0 0 0 0 3 0 1 45.508 45.508 2 0.0091523 14579 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.465 56.678 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 2492.8 20672 2542 19900 47860 55448 55448 1 VFADYEAYIQCQAQVDR Unmodified 2074.9418 0.94183978 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 6 0 1 78.474 78.474 3 0.00023111 28648 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.974 43.868 29.839 17.881 19.335 0 48.116 0 28 19 19 0 46 0 1 1 1 0 1 0 5825.4 20673 2555 19901 47861 55449 55449 1 VFADYEEYIK Unmodified 1275.6023 0.60231961 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 9.5 3.5 1 1 75.77 75.77 2;3 0.004144 28684 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.939 55.886 89.64 28.427 58.635 36.073 75.747 0 84 28 56 37 74 0 2 1 1 1 2 0 7803.5 20674 3331 19902 47862;47863 55450;55451 55451 2 VFAMSPEEFGK Unmodified 1240.5798 0.57981002 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 8 0 1 73.675 73.675 2 0.0021384 25060 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.008 47.476 59.596 30.139 57.119 30.626 50.304 47.601 56 33 56 32 51 46 1 1 1 1 1 1 6479.3 20675 3344 19903 47864 55452 55452 1 VFANAPDSACVIGLR Unmodified 1588.8032 0.80316145 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 9.75 1.92 1 2 1 69.665 69.665 2;3 1.0707E-05 25722 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.615 60.347 48.941 38.575 117.54 0 113.79 116.45 46 37 111 0 111 111 1 1 2 0 2 2 49390 20676 1357 19904 47865;47866;47867;47868 55453;55454;55455;55456 55456 4 VFASLPQVER Unmodified 1144.6241 0.6240581 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 10 2.16 1 1 1 64.169 64.169 2;3 5.3253E-05 19944 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.11 77.935 217.36 19.403 306.54 217.44 0 79.95 204 19 292 213 0 75 2 1 2 2 0 2 61139 20677 1263 19905 47869;47870;47871 55457;55458;55459 55458 3 VFCIGPVFR Unmodified 1093.5743 0.57427114 2803 Q922B2 Dars Aspartate--tRNA ligase, cytoplasmic yes yes 0 0 0 0 8 4.97 1 1 1 75.532 75.532 2 0.003071 26145 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.191 63.768 364.98 237.23 312.5 275.09 539.03 170.24 343 251 315 278 533 167 3 3 3 3 3 1 67639 20678 2803 19906 47872;47873;47874 55460;55461;55462 55460 3 VFDAIMNFR Unmodified 1111.5485 0.54845032 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 13 0 1 81.276 81.276 2 0.0077811 31489 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.192 50.667 118.75 70.729 0 90.719 0 0 111 74 0 83 0 0 1 1 0 1 0 0 9009.1 20679 1652 19907 47875 55463 55463 1 VFDKDGNGYISAAELR Deamidation (N) 1754.8475 0.84752869 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 1 0 1 7.42 2.69 3 3 2 2 2 65.702 65.702 3 2.9183E-24 20874 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 141.82 102.65 7348.7 6907.2 8808.2 7465.8 7777.7 8361.1 6919 7066 8828 7408 8009 8032 14 16 16 16 15 17 1790700 20680 1340 19908 47876;47877;47878;47879;47880;47881;47882;47883;47884;47885;47886;47887 55464;55465;55466;55467;55468;55469;55470;55471;55472;55473;55474;55475;55476;55477;55478;55479;55480;55481 55477 414 18 VFDKDGNGYISAAELR Unmodified 1753.8635 0.8635131 1340 P0DP28;P0DP27;P0DP26;Q3UKW2 Calm1 yes no 0 0 0 1 8.6 2.42 1 1 1 1 1 63.261 63.261 3 1.8165E-17 20989 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.16 97.636 1345.5 1463.7 1850 1415.8 1647 1713.3 1269 1490 1844 1397 1693 1646 6 7 6 5 7 5 348730 20681 1340 19908 47888;47889;47890;47891;47892 55482;55483;55484;55485;55486;55487;55488 55484 7 VFDLLNR Unmodified 875.4865 0.48650199 810 E0CZ72;P28740;F8VQ42 Kif2a Kinesin-like protein;Kinesin-like protein KIF2A yes no 0 0 0 0 9.5 0.5 1 1 71.23 71.23 2 0.029762 23162 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.472 33.836 129.35 44.185 44.281 106.23 138.91 46.679 121 46 46 102 139 46 2 1 1 2 2 1 14364 20682 810 19909 47893;47894 55489;55490 55489 2 VFDYSEYWEGAR Unmodified 1520.6572 0.65720872 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 10.7 3.3 1 2 75.039 75.039 2;3 0.00020028 27244 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.596 66.925 69.217 0 88.674 17.574 45.999 77.571 65 0 83 19 46 74 2 0 2 1 1 2 5980.7 20683 974 19910 47895;47896;47897 55491;55492;55493 55491 3 VFEDESGK Unmodified 909.40798 0.40797689 3159 Q9DD18 Dtd1 D-tyrosyl-tRNA(Tyr) deacylase 1 yes yes 0 0 0 0 5 0 1 49.812 49.812 2 0.010143 15894 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.392 30.08 0 48.944 0 0 84.851 57.275 0 46 0 0 83 56 0 1 0 0 1 1 4032.9 20684 3159 19911 47898 55494 55494 1 VFEEDALSWEDK Unmodified 1466.6565 0.65654002 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 4 0 1 76.115 76.115 3 0.00018775 28234 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.593 48.961 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 3534.1 20685 3204 19912 47899 55495 55495 1 VFEEFNVDLQEELPSLWSSR Unmodified 2423.1645 0.16450573 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 8 3.56 1 1 1 100.14 100.14 3 7.5858E-17 37190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.37 102.12 6.4134 4.8875 0 25.63 32.013 38.671 6 5 0 24 33 37 1 1 0 2 2 1 7140 20686 90 19913 47900;47901;47902 55496;55497;55498 55497 3 VFEEMNVDLQEELPSLWNSR Deamidation (N) 2435.1315 0.13149104 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 1 0 0 7 0 1 96.613 96.613 3 0.00067374 35517 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.397 38.751 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 603.85 20687 1157;2210 19914 47903 55499 55499 308 1 VFEFGGPEVLK Unmodified 1220.6441 0.64412484 1560 P47199;A0A0A6YXR4;D3YWU6;D3Z4Q4;D3Z2X0;D3YUG9;V9GXY8;A0A0G2JFU5 Cryz Quinone oxidoreductase yes no 0 0 0 0 7.33 0.471 2 1 77.618 77.618 2;3 0.0010166 27555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.595 41.379 29.495 66.571 106.22 0 84.191 76.482 28 65 102 0 83 74 1 1 2 0 2 2 6282.5 20688 1560 19915 47904;47905;47906 55500;55501;55502 55500 3 VFEGNRPTNSIVFTK Unmodified 1707.8944 0.8944193 1316 P06745;CON__Q3ZBD7;A0A0U1RQ18 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 1 10.3 1.83 1 2 2 2 59.538 59.538 3;4 6.4654E-22 18570 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.89 108.03 1109.8 935.96 1336.8 994.37 561.26 1284.4 1045 971 1327 980 575 1212 6 7 6 6 3 7 258240 20689 1316 19916 47907;47908;47909;47910;47911;47912;47913 55503;55504;55505;55506;55507;55508;55509;55510 55503 8 VFEHSSVELK Unmodified 1173.603 0.60298831 1122 H3BKH6;Q9R0P3;H3BLJ9;H3BJL6;H3BJP2;H3BK43;H3BJC6 Esd S-formylglutathione hydrolase yes no 0 0 0 0 6 0 1 52.412 52.412 3 0.0057974 16444 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.174 30.076 59.76 65.13 0 79.386 79.515 106.46 56 65 0 74 83 102 1 1 0 1 1 1 8964.6 20690 1122 19917 47914 55511 55511 1 VFESIGK Unmodified 778.4225 0.42250475 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 8 1 1 1 59.898 59.898 2;3 0.027285 19279 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.925 33.719 99.218 19.403 144.52 94.558 110.44 38.375 93 19 139 93 111 37 1 1 2 1 2 1 8706.1 20691 1788 19918 47915;47916 55512;55513 55512 2 VFESTCSSGSPGSNQALLLLR Unmodified 2222.1001 0.10013134 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 8 0 1 75.44 75.44 3 0.0085365 25892 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.538 18.256 0 0 29.033 28.347 27.986 0 0 0 28 28 28 0 0 0 1 1 1 0 2483.2 20692 2235 19919 47917 55514 55514 1 VFFDLMR Unmodified 926.46841 0.46840908 1784 P63321;Q9JIW9 Rala;Ralb Ras-related protein Ral-A;Ras-related protein Ral-B yes no 0 0 0 0 10.5 0.5 1 1 80.822 80.822 2 0.021458 25520 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 62.39 48.687 54.12 196.68 0 219.82 86.623 46 55 185 0 213 83 1 1 2 0 2 1 43985 20693 1784 19920 47918;47919 55515;55516 55515 2 VFFDVDIGGER Unmodified 1252.6088 0.60880197 2952 Q9CR16 Ppid Peptidyl-prolyl cis-trans isomerase D yes yes 0 0 0 0 8 0 1 77.289 77.289 2 0.0054154 26787 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.056 34.634 0 19.729 29.112 0 28.291 29.041 0 19 28 0 28 28 0 1 1 0 1 1 2467.8 20694 2952 19921 47920 55517 55517 1 VFFNILEEAR Unmodified 1236.6503 0.65027285 3007 Q9CZP5 Bcs1l Mitochondrial chaperone BCS1 yes yes 0 0 0 0 10 0 1 85.166 85.166 2 0.037811 27222 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.982 32.834 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1049.2 20695 3007 19922 47921 55518 55518 1 VFFSEGAQANR Unmodified 1224.5887 0.58873523 2878 Q99MR8 Mccc1 Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial yes yes 0 0 0 0 8 0 1 55.031 55.031 2 0.002855 16258 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.345 47.184 49.176 36.052 0 49.612 35.433 28.837 46 37 0 46 37 28 1 1 0 1 1 1 2670.3 20696 2878 19923 47922 55519 55519 1 VFFTDYGQIPK Unmodified 1313.6656 0.66558856 175 A0A0R4J0I9;Q91ZX7;Q3U5J2 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 0 10 0 2 75.668 75.668 2;3 5.3226E-06 22944 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.2 75.944 69.127 43.159 67.25 37.526 0 59.696 65 46 65 38 0 56 2 2 1 2 0 2 7098.8 20697 175 19924 47923;47924 55520;55521 55521 2 VFFVHEGYQGLVDGGEHIR Unmodified 2158.0596 0.059587149 1568 P47857;A0A2R8VHV2;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 7.33 1.25 1 1 1 64.241 64.241 4 3.5837E-07 21222 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.11 53.818 373.75 83.345 437.09 416.38 128.5 282.55 351 84 425 407 129 266 4 3 4 5 3 2 29599 20698 1568 19925 47925;47926;47927 55522;55523;55524;55525;55526 55524 5 VFFYNPTTR Unmodified 1143.5713 0.57129425 2538 Q8CGF7 Tcerg1 Transcription elongation regulator 1 yes yes 0 0 0 0 11 0 1 65.63 65.63 2 0.013191 18046 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 71.379 41.213 0 0 0 71.045 0 99.138 0 0 0 65 0 93 0 0 0 1 0 1 8036.7 20699 2538 19926 47928 55527 55527 1 VFGDSSR Unmodified 766.36097 0.36096712 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7 0 1 39.854 39.854 2 0.02751 9780 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.352 38.805 191.46 242.42 256.62 351.95 0 326.2 181 244 266 336 0 306 1 1 1 1 0 1 21619 20700 1557 19927 47929 55528 55528 1 VFGFSLITNK Unmodified 1124.623 0.62299547 1440 Q543K9;P23492 Pnp Purine nucleoside phosphorylase yes no 0 0 0 0 1 0 1 81.935 81.935 3 0.00027603 28807 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 90.906 57.785 49.909 36.899 56.401 38.744 0 78.884 47 37 56 37 0 74 2 1 2 1 0 2 9016.3 20701 1440 19928 47930 55529;55530 55530 2 VFGLHSVSR Unmodified 1000.5454 0.54541385 2212;1850 P97427;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 10.8 1.33 1 1 2 1 45.301 45.301 2;3 6.4113E-07 9883 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 158.37 119.22 236.3 262.86 308.43 226.79 226.22 255.53 222 260 302 216 225 244 4 3 5 4 3 4 284360 20702 1850;2212 19929 47931;47932;47933;47934;47935 55531;55532;55533;55534;55535;55536 55532 6 VFGWVHR Unmodified 899.47661 0.476606 2441 Q8BP47 Nars Asparagine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 12 0 1 54.037 54.037 3 0.0020865 11716 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.68 51.416 58.957 0 9.6896 0 56.948 47.411 55 0 9 0 56 46 2 0 1 0 1 1 10084 20703 2441 19930 47936 55537;55538 55537 2 VFHLPTTTFIGGQEPALPLR Unmodified 2193.1946 0.19462407 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 79.355 79.355 3;4 4.1723E-09 24750 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.234 64.607 29.865 20.216 39.883 20.767 0 78.884 28 19 37 19 0 74 1 1 2 1 0 2 28856 20704 2074 19931 47937;47938;47939 55539;55540;55541 55540 3 VFHNALK Deamidation (N) 828.44939 0.4493882 1885 Q04690 Nf1 Neurofibromin yes yes 0 1 0 0 1 0 1 63.125 63.125 3 0.036774 21113 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 61.837 26.737 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20705 1885 19932 47940 55542 55542 776 1 VFIGNLNTAIVK Unmodified 1287.7551 0.75507227 275 A0A1D5RLK6;A0A1D5RMF0;A0A1D5RLM5;Q8BTF8 Ralyl RNA-binding Raly-like protein yes no 0 0 0 0 12 0 1 75.374 75.374 2 0.00055883 19908 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.533 49.611 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20706 275 19933 47941 55543 55543 1 VFIGNLNTLVVK Unmodified 1315.7864 0.7863724 3389 Q9Z204;A0A2I3BRM6;A0A2I3BQH3 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes no 0 0 0 0 5.57 5.29 4 1 2 82.12 82.12 2;3 2.2756E-22 22574 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 162.26 118.14 419.04 118.53 168.55 175.91 293.36 317.59 415 112 158 167 297 305 4 3 4 4 6 6 166620 20707 3389 19934 47942;47943;47944;47945;47946;47947;47948 55544;55545;55546;55547;55548;55549;55550;55551;55552 55551 9 VFIMDNCEELIPEYLNFIR Unmodified 2414.165 0.16503978 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 102.22 102.22 3 7.6998E-08 36929 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.447 85.944 8.584 52.569 37.764 24.914 20.792 59.359 8 50 38 24 21 56 1 3 2 3 2 4 21810 20708 1322 19935 47949;47950;47951;47952;47953 55553;55554;55555;55556;55557;55558 55554 6 VFIMDNCEELIPEYLNFIR Oxidation (M) 2430.16 0.1599544 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 1 0 7 0 1 97.49 97.49 3 0.013898 35845 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 47.68 27.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20709 1322 19935 47954 55559 55559 66 1 VFIMDSCDELIPEYLNFIR Unmodified 2373.1385 0.13849068 1354 P11499;E9Q3D6 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 10.2 2.77 1 1 2 103.38 103.38 3;4 1.5844E-08 37065 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.514 67.734 0 29.377 49.733 33.186 3.138 27.716 0 28 48 33 3 26 0 3 3 2 1 3 24051 20710 1354 19936 47955;47956;47957;47958 55560;55561;55562;55563;55564;55565 55560 6 VFIPHGLIMDR Unmodified 1296.7013 0.70126256 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 9.5 0.5 1 1 66.326 66.326 3 0.0026015 20839 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.265 44.121 29.875 0 28.419 94.747 0 0 28 0 28 93 0 0 1 0 1 2 0 0 25051 20711 1295 19937 47959;47960 55566;55567;55568 55566 3 VFISNIPYDMK Unmodified 1325.669 0.66895938 521 G8JL68;A2ATP5;A2ATP6;Q8C854;F6XJA1 Myef2 Myelin expression factor 2 yes no 0 0 0 0 10 0 1 76.422 76.422 3 0.0036339 23325 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.149 33.544 59.602 44.186 44.211 58.573 0 0 56 46 46 56 0 0 1 1 1 1 0 0 4842.4 20712 521 19938 47961 55569 55569 1 VFLCPGLLK Unmodified 1045.5994 0.59942325 672 Q80TS3;D3YU23;D3Z4S7;D3YVT9;D3YTW7;D3Z3G4;D3Z593;D3Z634;D3Z6H7;D3Z3X6;D3Z6H9;D3YWB1;D3Z4V0;D3YWR3;D3Z6J2;D3Z5M6 Lphn3;Adgrl3 Latrophilin-3 yes no 0 0 0 0 6.5 5.5 1 1 78.086 78.086 2 3.3047E-05 27319 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.85 89.43 54.245 27.174 57.267 31.903 46.65 0 51 28 56 32 46 0 2 1 2 1 1 0 12264 20713 672 19939 47962;47963 55570;55571 55570 2 VFLDPNTLSDDGTVALR Unmodified 1831.9316 0.93159267 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 6 0 1 80.117 80.117 3 0.00062665 29495 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.831 20.772 39.245 35.949 46.232 26.605 66.137 18.367 37 37 46 28 65 19 1 1 1 1 1 1 6522.5 20714 3259 19940 47964 55572 55572 1 VFLENVIR Unmodified 988.57057 0.57056597 1739 P62806 Hist1h4a Histone H4 yes yes 0 0 0 0 8.25 4.44 1 1 1 1 70.065 70.065 2 0.0061549 22605 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.12 58.69 966.44 512.79 869.78 1117.2 374.84 778.92 907 513 848 1076 386 736 4 3 3 5 3 4 727380 20715 1739 19941 47965;47966;47967;47968 55573;55574;55575;55576;55577 55574 5 VFLEYIQPK Unmodified 1135.6277 0.6277465 904 E9Q442;G3X9Y5;E9Q735;Q8VDS1 Ube4a Ubiquitin conjugation factor E4 A yes no 0 0 0 0 10 0 1 77.38 77.38 2 0.0027623 23777 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.296 65.158 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20716 904 19942 47969 55578 55578 1 VFLFQAPSLEQMQSWITR Unmodified 2180.1088 0.10884553 2042 Q5DTT2 Psd PH and SEC7 domain-containing protein 1 yes yes 0 0 0 0 12 0 1 101.13 101.13 3 2.4414E-07 28643 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.095 88.495 9.638 0 3.1974 0 0 0 9 0 3 0 0 0 1 0 1 0 0 0 1783.5 20717 2042 19943 47970 55579 55579 1 VFLISASSK Unmodified 950.54368 0.54368251 2969 Q9CT10 Ranbp3 Ran-binding protein 3 yes yes 0 0 0 0 6.5 5.5 1 1 67.077 67.077 2 6.3573E-07 16566 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 161.02 93.039 59.628 72.596 190.02 123.23 167.98 0 56 70 185 126 166 0 1 1 2 2 2 0 18747 20718 2969 19944 47971;47972 55580;55581 55581 2 VFLLGEEVAQYDGAYK Unmodified 1800.8934 0.89341625 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 8.22 1.93 1 3 2 2 1 86.454 86.454 2;3;4 1.105E-05 31911 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.311 55.163 119.18 249.37 201.63 46.642 255.49 285.94 112 242 193 47 253 272 3 5 5 2 5 5 136040 20719 3016 19945 47973;47974;47975;47976;47977;47978;47979;47980;47981 55582;55583;55584;55585;55586;55587;55588;55589;55590;55591;55592 55586 11 VFLLPDK Unmodified 830.49019 0.49019038 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 0 0 0 10.8 1.48 1 1 1 1 72.074 72.074 2 0.019297 21061 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.09 47.935 748.67 834.14 1543.2 996.77 1392.9 1600.8 705 851 1517 991 1428 1539 2 3 4 3 4 4 403440 20720 223;1553 19946 47982;47983;47984;47985 55593;55594;55595;55596 55595 4 VFLLPDKK Unmodified 958.58515 0.5851534 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 0 0 1 8.75 4.6 1 1 1 1 63.538 63.538 3 0.0061778 16914 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.657 38.802 4413 3233.5 4155.5 1078 2665.6 1210.9 4151 3384 4041 1051 2605 1146 5 5 4 3 3 3 647040 20721 223;1553 19947 47986;47987;47988;47989 55597;55598;55599;55600;55601 55599 5 VFLMDPVIFTVAHLEAK Unmodified 1929.0434 0.043391725 1127 H7BX15;Q80TR1;E9Q9Q9;E9Q3V9 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 10.5 0.5 1 1 98.924 98.924 3 0.0024663 32613 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 43.208 24.376 0 19.729 29.112 0 0 0 0 19 28 0 0 0 0 1 1 0 0 0 4551.4 20722 1127 19948 47990;47991 55602;55603 55603 2 VFLNNLCPRPEIDNIFSEFGAK Unmodified 2579.2842 0.28424371 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 1 10.5 0.5 1 1 90.413 90.413 4 0.0011984 28994 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 42.711 28.251 0 0 57.048 28.01 45.849 28.54 0 0 56 28 46 28 0 0 2 1 1 1 9812.1 20723 3373 19949 47992;47993 55604;55605 55605 2 VFLQYLPAIR Unmodified 1218.7125 0.71247918 1465 P27601;Q9D034 Gna13 Guanine nucleotide-binding protein subunit alpha-13 yes no 0 0 0 0 7 6 1 1 84.481 84.481 2 5.6671E-05 29811 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 110.31 79.74 69.544 67.497 18.051 59.606 27.956 119.39 65 65 19 56 28 112 2 2 1 2 1 2 15127 20724 1465 19950 47994;47995 55606;55607;55608 55606 3 VFLSGMPELR Unmodified 1147.606 0.6059652 1524 P35585;A0A1L1SUA0;A0A0R4IZX6;A0A0R4J1L4;Q9WVP1 Ap1m1;Ap1m2 AP-1 complex subunit mu-1;AP-1 complex subunit mu-2 yes no 0 0 0 0 10 0 1 74.442 74.442 2 0.0014071 22509 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.906 47.823 34.197 27.486 0 0 0 49.036 32 28 0 0 0 46 1 1 0 0 0 1 4771.3 20725 1524 19951 47996 55609 55609 1 VFLSYCSLHGAQGGGLASVR Unmodified 2078.0367 0.036743217 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6.5 5.5 1 1 64.159 64.159 3 1.0275E-10 15589 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.679 48.385 0 0 40.034 0 0 20.254 0 0 37 0 0 19 0 0 1 0 0 1 5006.4 20726 570 19952 47997;47998 55610;55611 55611 2 VFLTTAEVISQQVSDK Unmodified 1763.9305 0.93053004 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10 0.816 1 1 1 87.002 87.002 3 4.5637E-17 28014 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.36 106.11 0 0 38.774 48.704 64.936 59.696 0 0 37 47 65 56 0 0 1 2 2 1 23332 20727 1317 19953 47999;48000;48001 55612;55613;55614 55613 3 VFMQEFK Unmodified 927.45242 0.45242467 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 8 0 1 67.923 67.923 2 0.065295 22384 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.485 16.474 99.474 62.452 0 78.828 109.19 96.022 93 65 0 74 111 93 1 1 0 1 1 1 6531.2 20728 2971 19954 48002 55615 55615 1 VFNDLWGK Unmodified 977.49707 0.49706667 1039 S4R255;F8WGF2;Q9Z0J4 Nos1 Nitric oxide synthase;Nitric oxide synthase, brain yes no 0 0 0 0 10 0 1 75.437 75.437 2 0.040346 22810 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.563 11.996 0 47.979 57.713 0 0 69.29 0 46 56 0 0 65 0 1 1 0 0 1 3696 20729 1039 19955 48003 55616 55616 1 VFNGSGKPIDR Deamidation (N) 1189.6091 0.60913632 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 1 0 1 8.25 2.77 1 2 1 49.936 49.936 3 0.0034429 14909 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.201 43.293 168.71 547.37 590.72 624.06 629.32 261.55 158 530 600 614 631 250 2 3 3 4 3 3 129580 20730 1741 19956 48004;48005;48006;48007 55617;55618;55619;55620 55619 680 4 VFNGSGKPIDR Unmodified 1188.6251 0.62512073 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 1 9 0 1 45.066 45.066 3 0.0026846 10932 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.536 46.49 78.129 101.12 128.28 132.8 87.529 106.23 74 102 130 130 93 102 1 1 1 1 1 1 7418.4 20731 1741 19956 48008 55621 55621 1 VFNLFCLYGNIEK Deamidation (N) 1616.7909 0.79086543 2794 Q921F4 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 1 0 0 12 0 1 92.885 92.885 3 0.00043454 26633 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.891 36.87 59.613 0 79.767 0 92.976 125.27 56 0 74 0 93 120 1 0 1 0 1 1 6046.6 20732 2794 19957 48009 55622 55622 997 1 VFNLFCLYGNIEK Unmodified 1615.8068 0.80684985 2794 Q921F4 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes yes 0 0 0 0 12 0 1 92.936 92.936 2 0.00048817 26648 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.507 58.389 14.906 0 19.426 23.726 13.554 0 14 0 19 23 14 0 1 0 1 1 1 0 1035.8 20733 2794 19957 48010 55623 55623 1 VFNLYPR Unmodified 907.49159 0.49158736 1158 O08553 Dpysl2 Dihydropyrimidinase-related protein 2 yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 63.173 63.173 2 0.0029156 22559 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 151.14 111.6 5129.5 4236.9 6153.3 5325 4828.7 5986.4 4834 4367 6143 5271 4947 5745 7 5 6 6 4 6 3352900 20734 1158 19958 48011;48012;48013;48014;48015 55624;55625;55626;55627;55628;55629;55630;55631;55632 55632 9 VFNQEGEFMLK Unmodified 1340.6435 0.64347291 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 7 0 1 73.574 73.574 3 0.054928 25572 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.982 12.19 20.265 0 20.456 0 28.62 19.437 19 0 19 0 28 19 1 0 1 0 1 1 2366.3 20735 3195 19959 48016 55633 55633 1 VFNTTPDDLDLHVIYDVSHNIAK Unmodified 2625.3075 0.30748157 2862 Q99LF4 Rtcb tRNA-splicing ligase RtcB homolog yes yes 0 0 0 0 6 0 1 82.677 82.677 4 1.7817E-06 30772 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.626 40.754 39.564 56.916 0 30.604 58.576 0 37 56 0 28 56 0 1 2 0 1 1 0 4176.3 20736 2862 19960 48017 55634;55635 55635 2 VFNVFCLYGNVEK Unmodified 1587.7755 0.77554972 1110 G5E924;Q8R081;G3UY38 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 11 0 1 86.388 86.388 2 0.00055523 27339 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.568 63.581 29.857 27.646 7.9287 0 0 0 28 28 9 0 0 0 1 1 1 0 0 0 5091.7 20737 1110 19961 48018 55636 55636 1 VFPGSTTEDYNLIVIER Unmodified 1951.9891 0.98910755 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 5 0 1 79.316 79.316 3 9.4238E-06 29833 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.235 50.226 0 19.566 38.86 0 38.702 0 0 19 37 0 37 0 0 1 1 0 1 0 2834.9 20738 2151 19962 48019 55637 55637 1 VFPLSCVVQQYAWGK Unmodified 1780.8971 0.89706184 2822 Q924M7;F6Q3K8 Mpi Mannose-6-phosphate isomerase yes no 0 0 0 0 6.75 5.76 2 1 1 90.981 90.981 3 1.534E-58 25684 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 198.14 157.58 203.2 162.11 43.835 147.16 158.43 102.34 190 163 45 138 158 97 5 3 2 4 5 5 46366 20739 2822 19963 48020;48021;48022;48023 55638;55639;55640;55641;55642;55643;55644;55645;55646 55644 9 VFPPEIVEQMGCK Unmodified 1532.7367 0.73672137 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8 2.14 1 3 2 1 78.278 78.278 2;3 3.2591E-06 27233 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.017 64.179 138.92 130.01 95.072 235.26 257.05 163.79 130 130 93 223 260 158 4 4 2 5 5 2 18765 20740 1554 19964 48024;48025;48026;48027;48028;48029;48030 55647;55648;55649;55650;55651;55652;55653;55654;55655;55656 55653 10 VFQDKDAMLNAAFALAADISSK Unmodified 2325.1675 0.16748262 1017 F7B227;O35459 Ech1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial yes no 0 0 0 1 10 0 1 105.31 105.31 4 4.6679E-06 33570 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.658 47.382 0 0 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 606.48 20741 1017 19965 48031 55657 55657 1 VFQDVAQK Unmodified 933.49198 0.4919813 1034;29 F8VQE9;Q8VHH5;A0A1D5RMG4;A0A0G2JDW1;Q8BXK8;A0A087WRF2;E9Q3K3 Agap3;Agap1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3;Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 no no 0 0 0 0 7.5 0.5 1 1 55.874 55.874 2 0.0055472 17337 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.84 40.608 147.95 61.999 149.35 141.87 61.424 234.9 139 65 148 139 65 222 2 1 2 2 1 2 10639 20742 1034;29 19966 48032;48033 55658;55659 55658 2 VFQFLNAK Unmodified 965.53345 0.53345218 989 F6RSK3;Q8BP67 Gm17430;Rpl24 60S ribosomal protein L24 yes no 0 0 0 0 12 0 1 74.949 74.949 3 0.001573 19781 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.296 28.706 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20743 989 19967 48034 55660 55660 1 VFQLLPSFPTLTR Unmodified 1517.8606 0.86059998 2109 Q61097;Q5SXE4;A0A2I3BR95;A0A140LHS5 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 0 1 0 3 93.389 93.389 2;3 7.9859E-08 32717 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 115.57 82.023 9.657 24.08 29.365 19.321 0 33.046 9 23 29 18 0 31 1 1 2 2 0 2 5058 20744 2109 19968 48035;48036;48037 55661;55662;55663 55662 3 VFQPLPHENKPLTLSSYQTNK Unmodified 2440.2751 0.27505923 2158 Q62426 Cstb Cystatin-B yes yes 0 0 0 1 9.5 0.5 1 1 61.734 61.734 4 1.204E-38 16716 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.93 118.39 63.321 199.27 235.47 73.684 94.765 224.35 60 195 232 74 97 213 1 2 2 1 1 2 45052 20745 2158 19969 48038;48039 55664;55665 55665 2 VFQSNANYAENFIQSIVSTVEPALR Unmodified 2796.4083 0.40825825 3022 Q9D0F9 Pgm1 Phosphoglucomutase-1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 113.01 113.01 3 8.7369E-51 34409 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 149.64 135.48 0 2 27.212 20.658 16.856 9.2324 0 2 26 20 17 9 0 1 4 2 3 3 9075.7 20746 3022 19970 48040;48041;48042;48043 55666;55667;55668;55669;55670;55671;55672;55673;55674 55668 9 VFQVEYAMK Unmodified 1113.5529 0.55286699 1253 O70435;E0CZ34;F8WH02;E0CYL6 Psma3 Proteasome subunit alpha type-3 yes no 0 0 0 0 8.5 0.5 1 1 68.872 68.872 3 0.0016065 22039 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.677 52.292 99.322 75.949 97.2 108.28 226.07 154.52 93 74 92 101 224 148 2 2 2 2 4 3 7180.8 20747 1253 19971 48044;48045 55675;55676;55677;55678;55679 55676 5 VFSAYIK Unmodified 826.45889 0.45889025 3303 Q9R0Q6;A0A0G2JF52 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 11 0.816 1 1 1 65.011 65.011 2;3 0.0054475 18196 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 135.35 58.759 826.62 478.16 427.37 644.74 570.22 684.09 775 502 432 623 589 657 4 3 2 3 2 3 112170 20748 3303 19972 48046;48047;48048 55680;55681;55682;55683 55680 4 VFSGVVSTGLK Unmodified 1092.6179 0.61791009 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 67.423 67.423 2;3 5.0195E-20 16816 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 172.98 116.72 228.89 112.14 324.53 317.59 333.17 650.26 215 111 312 314 340 630 4 2 3 4 3 6 114800 20749 1652 19973 48049;48050;48051;48052 55684;55685;55686;55687;55688;55689 55688 6 VFSIPEGQK Unmodified 1003.5338 0.53384611 2326 Q80W47;D3YWK1 Wipi2 WD repeat domain phosphoinositide-interacting protein 2 yes no 0 0 0 0 8 0 1 61.539 61.539 3 0.00083021 19302 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.476 51.081 0 0 0 0 64.319 106.9 0 0 0 0 65 102 0 0 0 0 1 1 3654.2 20750 2326 19974 48053 55690 55690 1 VFSPNVVNLTLVDLPGMTK Unmodified 2043.1074 0.10744854 815;2590 E9PUD2;Q8K1M6 Dnm1l Dynamin-1-like protein no no 0 0 0 0 11.3 1.39 1 1 2 1 2 95.635 95.635 3;4 3.1818E-10 27395 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.41 85.096 40.774 0 57.661 105.73 172.59 71.898 38 0 55 102 172 70 2 0 2 4 6 3 46479 20751 815;2590 19975 48054;48055;48056;48057;48058;48059;48060 55691;55692;55693;55694;55695;55696;55697 55695 7 VFSQLGSVLK Unmodified 1076.623 0.62299547 2976 Q9CWG8 Ndufaf7 NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 yes yes 0 0 0 0 11 0 1 75.518 75.518 2 0.0057097 22480 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.01 38.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20752 2976 19976 48061 55698 55698 1 VFSVLREESESVLTLK Unmodified 1835.004 0.0040293305 1786;811 E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 1 8 0 1 85.165 85.165 3 8.5078E-05 30462 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.428 72.009 0 46 0 46 0 0 0 46 0 46 0 0 0 1 0 1 0 0 3379 20753 811;1786 19977 48062 55699;55700 55699 2 VFSVNNFQR Unmodified 1109.5618 0.56179219 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 10 0 1 58.423 58.423 2 3.0638E-05 15315 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 142.04 95.208 69.069 38.68 80.821 44.632 44.059 58.439 65 42 79 46 46 56 1 1 1 1 1 1 8067.1 20754 2499 19978 48063 55701 55701 1 VFSVTHIK Unmodified 929.53345 0.53345218 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 11 1.58 1 1 1 1 53.543 53.543 2;3 0.0010503 11519 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.71 45.726 49.149 41.374 0 273.51 0 202.54 46 42 0 255 0 190 1 1 0 3 0 2 35810 20755 3216 19979 48064;48065;48066;48067 55702;55703;55704;55705 55704 4 VFSWGFGGYGR Unmodified 1231.5774 0.57744226 2421 Q8BK67 Rcc2 Protein RCC2 yes yes 0 0 0 0 6.5 5.5 1 1 77.624 77.624 2 0.0057211 20863 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.347 43.216 59.677 24.966 85.435 57.746 83.509 49.583 56 28 83 56 84 47 1 1 2 1 2 1 10092 20756 2421 19980 48068;48069 55706;55707 55707 2 VFTAIADQPWAQR Unmodified 1501.7678 0.76776223 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 10 0 1 74.208 74.208 3 0.00011484 22428 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.479 59.341 29.856 37.355 0 30.604 0 0 28 37 0 28 0 0 1 1 0 1 0 0 2512.5 20757 2418 19981 48070 55708 55708 1 VFTFLPAK Unmodified 921.53239 0.53238955 2274 Q78JE5;D6REV6 Fbxo22 F-box only protein 22 yes no 0 0 0 0 12 0 1 76.646 76.646 2 0.058357 20608 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.972 42.986 0 69.16 0 0 0 49.036 0 65 0 0 0 46 0 1 0 0 0 1 9176.5 20758 2274 19982 48071 55709 55709 1 VFTFSVGQHNYDR Unmodified 1568.7372 0.73719038 882 O08532;E9Q1X8 Cacna2d1 Voltage-dependent calcium channel subunit alpha-2/delta-1;Voltage-dependent calcium channel subunit alpha-2-1;Voltage-dependent calcium channel subunit delta-1 yes no 0 0 0 0 9 0 1 57.6 57.6 3 3.7884E-05 16761 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.167 80.752 0 48.944 0 60.158 55.813 0 0 46 0 56 56 0 0 1 0 1 1 0 7480.2 20759 882 19983 48072 55710 55710 1 VFTGVVTK Unmodified 849.496 0.49600404 2545 Q8CH18;A0A1W2P7Q7;A0A1W2P765 Ccar1 Cell division cycle and apoptosis regulator protein 1 yes no 0 0 0 0 10 0 1 59.728 59.728 2 0.016552 15938 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.594 50.222 78.87 0 89.408 0 0 108.73 74 0 83 0 0 102 1 0 1 0 0 1 6411.9 20760 2545 19984 48073 55711 55711 1 VFTTGFSR Unmodified 913.46577 0.46576654 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 10 0 1 56.164 56.164 2 0.0045692 14258 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.39 51.712 379.14 264.01 435.31 370.94 400.05 434.17 357 279 434 370 413 418 1 1 1 1 1 1 30868 20761 3335 19985 48074 55712 55712 1 VFTTQELVQAFTHAPAALEADR Unmodified 2414.223 0.22302366 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 88.554 88.554 3 3.7203E-28 32073 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.65 116.52 0 19.729 82.145 24.274 0 40.508 0 19 79 25 0 38 0 1 3 2 0 2 32219 20762 2420 19986 48075;48076;48077;48078;48079 55713;55714;55715;55716;55717 55714 5 VFTTVGSAEK Unmodified 1037.5393 0.53932542 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 8 0 1 55.422 55.422 2 0.00013326 16414 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 101.97 48.804 39.34 26.5 38.246 0 57.278 37.808 37 28 37 0 56 37 1 1 1 0 1 1 3228.9 20763 1412 19987 48080 55718 55718 1 VFTVSHIK Unmodified 929.53345 0.53345218 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 11.5 1.12 1 1 1 1 51.129 51.129 3 0.00022569 12177 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.16 58.323 564.92 441.66 837.52 838 617.73 955.63 531 441 824 823 648 913 2 3 3 4 3 4 371280 20764 2370 19988 48081;48082;48083;48084 55719;55720;55721;55722;55723 55719 5 VFVANPNK Unmodified 887.4865 0.48650199 1888 Q06138 Cab39 Calcium-binding protein 39 yes yes 0 0 0 0 10 0 1 51.456 51.456 2 1.8746E-07 12212 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 170.17 146.61 59.358 0 122.68 56.819 77.061 86.279 56 0 116 60 79 83 1 0 1 1 1 1 13375 20765 1888 19989 48085 55724 55724 1 VFVDGHQLFDFYHR Unmodified 1778.8529 0.85288884 2709 Q8VED9 Lgalsl Galectin-related protein yes yes 0 0 0 0 9.25 2.28 1 1 1 1 69.828 69.828 4 4.9046E-06 23300 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.95 81.599 60.088 88.726 77.194 117.62 75.612 168.43 56 84 74 111 74 158 1 2 2 3 1 3 33109 20766 2709 19990 48086;48087;48088;48089 55725;55726;55727;55728 55726 4 VFVESVLR Unmodified 947.54402 0.54401687 3376 Q9Z1G3;D3Z5W3;Q99L60 Atp6v1c1;Atp6v1c2 V-type proton ATPase subunit C 1;V-type proton ATPase subunit C 2 yes no 0 0 0 0 9 0 1 66.371 66.371 2 0.036324 20876 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.198 32.039 79.23 34.026 0 112.58 0 0 74 37 0 103 0 0 1 1 0 1 0 0 9478.8 20767 3376 19991 48090 55729 55729 1 VFVGGLSPDTSEEQIK Unmodified 1704.857 0.85703074 668;3370 D3YTQ3;F6VQH5;Q9Z130 Hnrnpdl Heterogeneous nuclear ribonucleoprotein D-like no no 0 0 0 0 6 0 1 69.957 69.957 4 0.044809 24731 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.389 6.831 0 20.216 0 0 18.171 49.583 0 19 0 0 19 47 0 1 0 0 1 1 1603.5 20768 668;3370 19992 48091 55730 55730 1 VFVGYNSTGAELR Unmodified 1411.7096 0.70957864 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 8 3.9 1 1 1 1 1 60.802 60.802 2 9.012E-33 18226 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 181.87 120.97 0 144.62 263.29 290.19 196.17 188.1 0 139 261 288 204 180 0 2 3 5 3 1 85018 20769 1553 19993 48092;48093;48094;48095;48096 55731;55732;55733;55734;55735 55733 5 VFVGYNSTGAELR Deamidation (N) 1412.6936 0.69359423 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 1 0 0 8.2 2.48 1 2 1 1 65.398 65.398 2;3 3.1141E-17 22578 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 147.63 100.82 137.99 112.27 240.21 113.59 227.85 249.34 130 111 232 111 231 240 3 3 4 2 4 4 44299 20770 1553 19993 48097;48098;48099;48100;48101 55736;55737;55738;55739;55740 55736 580 5 VFVLPCIQQIQR Unmodified 1499.8283 0.82825399 1170 O08917;G3UYU4;G3UZZ5;G3UWW8;G3XA73 Flot1 Flotillin-1 yes no 0 0 0 0 9.25 4.82 1 1 1 1 78.423 78.423 2;3 1.7846E-14 21178 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 133.81 105.6 35.262 68.709 51.665 53.153 52.31 0 33 65 51 51 51 0 1 2 2 2 1 0 25875 20771 1170 19994 48102;48103;48104;48105 55741;55742;55743;55744;55745;55746 55745 6 VFVNSLGLMSTLSQPVSR Unmodified 1934.0295 0.029532574 215 A0A0R4J1Y6;E9PUC4;Q6NSW3 Sphkap A-kinase anchor protein SPHKAP yes no 0 0 0 0 1 0 1 87.019 87.019 3 0.021522 30922 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 33.667 12.714 0 20.08 8.1329 8.9862 19.461 0 0 19 9 9 19 0 0 1 1 1 1 0 855.48 20772 215 19995 48106 55747 55747 1 VFVQGYEK Unmodified 968.49673 0.49673232 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 8.5 0.5 1 1 56.921 56.921 2 0.0059211 17137 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.17 44.91 127.84 25.555 132.5 134.19 0 178.02 120 28 130 130 0 167 2 1 2 2 0 2 11380 20773 432 19996 48107;48108 55748;55749 55748 2 VFVSPLAK Unmodified 859.51674 0.51673948 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 11.5 1.12 1 1 1 1 66.299 66.299 2;3 0.0021747 18389 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 129.4 80.894 845.53 687.08 678.8 313.56 1164.2 1019.1 795 710 659 299 1177 977 3 3 2 2 4 3 435520 20774 2433 19997 48109;48110;48111;48112 55750;55751;55752;55753 55751 4 VFVTGPLPAEGR Unmodified 1241.6768 0.67682195 2781 Q91Z53;D6REG4 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 0 8.67 0.471 1 2 63.869 63.869 2;3 1.3719E-11 20408 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.45 55.616 355.74 263.23 221.44 58.608 273.48 299.2 334 269 223 55 269 288 4 3 3 1 2 3 38602 20775 2781 19998 48113;48114;48115 55754;55755;55756;55757 55754 4 VGACVLK Unmodified 745.41565 0.41564523 3113 Q9DB60 Fam213b Prostamide/prostaglandin F synthase yes yes 0 0 0 0 9 0 1 50.826 50.826 2 0.027131 13470 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.26 37.794 108.61 70.054 81.289 84.547 70.551 86.465 102 74 83 83 74 83 1 1 1 1 1 1 9127.1 20776 3113 19999 48116 55758 55758 1 VGADLTHVFCAR Unmodified 1344.6609 0.66085431 1142 J3QMM7;K3W4M4;Q9CZ42;J3QN06 Carkd ATP-dependent (S)-NAD(P)H-hydrate dehydratase yes no 0 0 0 0 8 0 1 61.256 61.256 3 0.016368 19148 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.306 15.293 49.128 45.631 0 39.075 72.642 86.405 46 46 0 37 74 83 1 1 0 1 1 1 6066.1 20777 1142 20000 48117 55759 55759 1 VGAEDADGIDMAYR Unmodified 1481.6457 0.64565776 2382 Q8BGQ7 Aars Alanine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 3 0.816 1 1 1 57.446 57.446 2;3 7.9778E-05 19547 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 72.891 58.1 29.676 27.962 38.207 9.2942 28.861 29.848 28 28 37 9 28 28 2 1 2 1 1 2 6439.8 20778 2382 20001 48118;48119;48120 55760;55761;55762 55760 3 VGAFTVVCK Unmodified 979.51609 0.51608756 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 9.33 3.94 1 1 1 1 1 1 62.156 62.156 2;3 3.7199E-12 17074 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 174.27 109.5 1461.2 759.12 1152.9 821.03 1247.6 1213.8 1371 796 1155 817 1263 1172 7 4 7 6 6 7 534750 20779 1312 20002 48121;48122;48123;48124;48125;48126 55763;55764;55765;55766;55767;55768;55769;55770;55771 55767 9 VGAGDSSGAR Unmodified 875.40971 0.40970823 3059 Q9D3B1 Hacd2 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 yes yes 0 0 0 0 4.5 0.5 1 1 24.596 24.596 2 0.0037489 4476 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.219 46.703 9.5516 4.4428 23.277 29.054 8.6742 29.6 9 5 23 28 9 28 1 1 2 2 1 2 2865.3 20780 3059 20003 48127;48128 55772;55773 55772 2 VGALLVQSFSK Unmodified 1147.6601 0.66010926 2311 Q80U35 Arhgef17 Rho guanine nucleotide exchange factor 17 yes yes 0 0 0 0 12 0 1 77.422 77.422 3 0.00092098 20846 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.726 47.422 0 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 3302.7 20781 2311 20004 48129 55774 55774 1 VGASEAALFLK Unmodified 1104.6179 0.61791009 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 0 8 0 1 72.211 72.211 3 6.3352E-05 24303 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.573 55.572 0 38.394 58.288 0 55.901 47.441 0 37 56 0 55 46 0 1 1 0 1 1 5061.3 20782 2095 20005 48130 55775 55775 1 VGASFLQR Unmodified 876.48175 0.48175096 1312 P05202 Got2 Aspartate aminotransferase, mitochondrial yes yes 0 0 0 0 11 2 1 1 52.74 52.74 2 0.011407 14618 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.561 37.47 556.27 509.94 730.71 699.42 479.4 584.38 523 526 735 688 486 556 2 3 3 3 2 2 373560 20783 1312 20006 48131;48132 55776;55777;55778 55777 3 VGCPVLALEVLSK Unmodified 1383.7796 0.77957246 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8.67 0.471 1 2 84.827 84.827 2;3 1.9501E-10 29457 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.015 44.088 0 48.944 0 49.44 84.282 38.171 0 46 0 46 84 37 0 1 0 1 2 1 14922 20784 570 20007 48133;48134;48135 55779;55780;55781 55781 3 VGCYYCLFQQEK Unmodified 1593.6956 0.69558484 1138 Q9CYI0;J3KMQ6;B1AQG3 5730455P16Rik Protein Njmu-R1 yes no 0 0 0 0 9 0 1 71.405 71.405 3 0.016996 23324 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.73 27.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20785 1138 20008 48136 55782 55782 1 VGDAIPSVEVFEGEPGK Unmodified 1728.857 0.85703074 1867 P99029;G3UZJ4 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 7 3.16 1 1 1 1 1 75.255 75.255 2;3 3.2204E-06 27974 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.544 75.221 226.54 195.01 302.74 152.99 298.37 153.31 213 195 296 158 297 149 5 5 6 5 6 4 83054 20786 1867 20009 48137;48138;48139;48140;48141 55783;55784;55785;55786;55787;55788;55789 55786 7 VGDAIPSVEVFEGEPGKK Unmodified 1856.952 0.95199376 1867 P99029;G3UZJ4 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 1 8 2.96 1 2 3 2 68.612 68.612 3;4;5 2.2112E-09 25026 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.7 94.906 659.66 600.88 837.82 784.05 595.61 802.76 621 611 843 768 612 769 7 6 8 7 6 8 119530 20787 1867 20010 48142;48143;48144;48145;48146;48147;48148;48149 55790;55791;55792;55793;55794;55795;55796;55797;55798 55798 9 VGDIIQIISK Unmodified 1084.6492 0.64921022 1 A0A067XG53;O70589;F6Y9I5 Cask Peripheral plasma membrane protein CASK yes no 0 0 0 0 10 0 1 82.987 82.987 3 0.052005 26405 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 38.875 16.341 49.176 36.052 0 0 65.015 86.623 46 37 0 0 65 83 1 1 0 0 1 1 2370.9 20788 1 20011 48150 55799 55799 1 VGDLYSDLR Unmodified 1036.5189 0.51892433 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 61.673 61.673 2 0.00052167 21551 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.72 55.74 165.9 231.74 234.82 227.19 77.772 224.84 157 232 240 222 83 213 2 2 2 2 1 2 26442 20789 2186 20012 48151;48152 55800;55801 55800 2 VGDPAEDFGTFFSAVIDAK Unmodified 1984.9418 0.941823 2548 Q8CHT0 Aldh4a1 Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 103.21 103.21 3 2.233E-07 37632 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.061 58.144 11.748 46.024 0 10.93 6.0989 56.324 11 44 0 10 6 53 2 4 0 2 1 4 5662 20790 2548 20013 48153;48154;48155 55802;55803;55804;55805 55802 4 VGDPQELNGITR Deamidation (N) 1298.6466 0.64664404 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 1 0 0 3.5 0.5 1 1 51.518 51.518 2 1.035E-10 17371 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 123.01 86.247 29.952 47.532 27.292 27.93 84.951 47.448 28 47 28 28 84 46 1 2 1 1 2 1 9424.8 20791 1412 20014 48156;48157 55806;55807 55806 513 2 VGDQAQR Unmodified 772.38277 0.3827652 2836 Q99JY9;A0A087WRA1;A0A087WQ14 Actr3 Actin-related protein 3 yes no 0 0 0 0 5 0 1 23.43 23.43 2 0.027665 3738 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.033 34.316 0 98.952 0 58.985 118.17 135.21 0 93 0 56 120 130 0 1 0 1 1 1 7640.6 20792 2836 20015 48158 55808 55808 1 VGDVYIPR Unmodified 917.49707 0.49706667 2145 Q62093 Srsf2 Serine/arginine-rich splicing factor 2 yes yes 0 0 0 0 9.5 3.5 1 1 54.663 54.663 2 0.028422 17690 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.26 26.834 0 192.65 314.17 168.99 247.44 244.24 0 186 308 176 252 234 0 2 2 2 2 1 31975 20793 2145 20016 48159;48160 55809;55810 55809 2 VGEATETALTCLVEK Unmodified 1619.8076 0.80763771 1242 O55143;B1ATS4;B1ATS5;E9Q559;Q64518 Atp2a2;Atp2a3 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Calcium-transporting ATPase;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 yes no 0 0 0 0 7 0 1 77.459 77.459 3 0.0075595 27413 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 44.196 20.364 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20794 1242 20017 48161 55811 55811 1 VGEDMLR Unmodified 818.39564 0.39563807 979 F6Q2Y9;Q91XT4 Sec16b Protein transport protein Sec16B yes no 0 0 0 0 7 4.32 1 1 1 28.785 28.785 3 0.0082789 5865 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.616 11.622 64.9 108.53 92.925 173 212.05 81.576 61 102 88 167 213 79 2 1 2 3 3 2 19650 20795 979 20018 48162;48163;48164 55812;55813;55814 55813 3 VGEFCHSR Unmodified 990.43415 0.43414884 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 6 0.816 1 1 1 33.35 33.35 3 0.0012649 7459 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.81 58.201 285.93 273 273.54 332.62 335.1 335.82 269 279 278 325 346 324 2 3 2 3 3 3 35873 20796 1876 20019 48165;48166;48167 55815;55816;55817 55816 3 VGEFSGANK Unmodified 907.43995 0.43994572 1346 P10639 Txn Thioredoxin yes yes 0 0 0 0 7 0.816 1 1 1 47.682 47.682 2 0.00073044 13414 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.81 60.709 268.85 279.71 450.4 72.18 422.05 376 253 287 436 74 419 361 2 3 3 1 3 2 81795 20797 1346 20020 48168;48169;48170 55818;55819;55820 55819 3 VGEGFEETLGEAVISTK Unmodified 1764.8782 0.87816011 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.38 3.35 1 2 2 1 2 80.019 80.019 2;3 3.889E-38 29482 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.93 111.81 178.68 174.18 87.227 95.986 175.31 290.28 167 169 84 93 176 277 4 5 2 3 4 6 110160 20798 1557 20021 48171;48172;48173;48174;48175;48176;48177;48178 55821;55822;55823;55824;55825;55826;55827;55828;55829 55825 9 VGEGPGVCWLAPEQTAGK Unmodified 1854.8934 0.89343302 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 6 0 1 70.162 70.162 3 6.6029E-05 24874 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.528 43.247 29.687 27.172 36.989 28.399 0 0 28 28 37 28 0 0 1 1 1 1 0 0 3781.5 20799 2686 20022 48179 55830 55830 1 VGEIEFEGLMR Unmodified 1278.6278 0.62782285 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 13 0 1 73.423 73.423 2 0.0033211 27587 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 72.006 39.165 48.643 55.075 73.549 66.662 0 88.478 46 56 74 65 0 83 1 1 1 1 0 1 4343.1 20800 3274 20023 48180 55831 55831 1 VGEIFSAAGAAFTK Unmodified 1367.7085 0.70851601 542 F8WH46;A2CF80;A2CF83;D3Z687;Q9DCT6 0610010K14Rik;Bap18 Chromatin complexes subunit BAP18 yes no 0 0 0 0 10 0 1 81.719 81.719 3 0.00050439 25784 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.004 43.126 20.05 37.601 24.84 69.565 0 39.442 19 37 28 65 0 37 1 1 1 1 0 1 2407.8 20801 542 20024 48181 55832 55832 1 VGELFQR Unmodified 847.4552 0.45520186 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 7.5 0.5 1 1 57.12 57.12 2 0.023644 17875 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.77 50.87 611.39 187.44 418.31 367.85 385.97 421.78 573 195 415 366 399 406 2 1 2 2 2 2 114450 20802 1557 20025 48182;48183 55833;55834 55833 2 VGELKDDDFEK Unmodified 1293.6089 0.60886155 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 1 9.25 3.77 1 1 2 56.262 56.262 3;4 0.00058733 18996 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.397 51.554 681.87 811.75 882.62 779.11 932.81 1066 642 820 896 777 961 1025 3 4 4 4 4 4 72953 20803 1500 20026 48184;48185;48186;48187 55835;55836;55837;55838 55838 4 VGELTQEANALAAGHPAQAPAINTR Unmodified 2499.283 0.28299816 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.75 0.829 2 1 1 65.689 65.689 3;4 6.063E-12 23373 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.959 59.696 29.904 56.792 66.972 76.072 146 154.67 28 56 65 74 148 149 1 2 2 2 4 4 27355 20804 2186 20027 48188;48189;48190;48191 55839;55840;55841;55842 55840 4 VGEPVALSEEER Unmodified 1313.6463 0.64630969 1990 Q3UJB0 Sf3b2 yes yes 0 0 0 0 3 0.816 1 1 1 50.902 50.902 2 1.2914E-06 17029 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 106.62 69.062 29.87 0 79.093 18.503 56.06 48.502 28 0 74 19 56 47 1 0 2 1 2 2 6200.1 20805 1990 20028 48192;48193;48194 55843;55844;55845 55844 3 VGEQAQVVIIDMNDPSNPIR Unmodified 2194.1052 0.10521671 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6 0.816 1 1 1 75.376 75.376 3 2.7925E-13 27308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.4 92.989 138.57 80.961 85.509 67.428 74.431 76.76 130 84 84 65 74 74 4 3 3 2 2 3 27838 20806 2185 20029 48195;48196;48197 55846;55847;55848;55849;55850 55848 5 VGETTPDK Unmodified 845.41306 0.41306227 3074 Q9D6J6 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes yes 0 0 0 0 9 4 1 1 38.685 38.685 2 0.012445 10643 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.355 22.323 177.81 124.22 267.1 131.68 264.38 318.65 167 130 260 130 269 306 1 1 2 1 2 2 19238 20807 3074 20030 48198;48199 55851;55852 55851 2 VGEVIVTK Unmodified 843.50657 0.50656873 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 6.67 0.943 2 1 55.96 55.96 2;3 0.0057469 16682 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.95 42.123 1180 1040.8 1144.3 659.78 837.13 1258.1 1111 1071 1144 676 847 1197 7 7 6 5 6 6 37282 20808 1766 20031 48200;48201;48202 55853;55854;55855;55856;55857;55858;55859 55857 7 VGFFQGDIR Unmodified 1037.5294 0.52942943 2753 Q91WC3;Q5ICG5;Q8R1X1;Q8BYJ0;E9Q7Y2 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 8 0 1 64.032 64.032 2 0.044831 20399 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.047 31.91 29.904 27.776 0 39.398 55.466 37.859 28 28 0 37 56 37 1 1 0 1 1 1 6085.9 20809 2753 20032 48203 55860 55860 1 VGFGNLEDEFWLGLDNIHR Unmodified 2230.0807 0.080716522 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.4 2.87 1 2 1 1 91.183 91.183 3;4 2.5984E-09 36058 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.67 92.935 9.5672 45.752 15.1 3.1046 56.069 47.375 9 43 14 3 55 46 1 2 1 1 3 2 31195 20810 2479 20033 48204;48205;48206;48207;48208 55861;55862;55863;55864;55865;55866 55866 6 VGFLSSLLPQSK Unmodified 1274.7234 0.72343779 2284 S4R1X1;Q7TMQ7 Wdr91 WD repeat-containing protein 91 yes no 0 0 0 0 1 0 1 85.072 85.072 3 0.00046214 30016 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.663 2.2893 39.342 0 60.394 0 0 0 37 0 56 0 0 0 1 0 1 0 0 0 5414.9 20811 2284 20034 48209 55867 55867 1 VGFYVNTFK Unmodified 1073.5546 0.55458155 90 A0A0G2JEG8;Q7TQF7 Amph Amphiphysin yes no 0 0 0 0 8 4.97 1 1 1 70.313 70.313 2;3 3.7949E-12 17775 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 174.16 115.99 665.13 646.24 736.87 73.924 637.3 258.35 627 658 723 74 621 247 4 3 4 2 4 2 218390 20812 90 20035 48210;48211;48212 55868;55869;55870;55871 55870 4 VGFYVNTFQSIAGLEENFHK Unmodified 2299.1273 0.12733236 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 10.5 1.66 2 1 1 88.841 88.841 3;4 1.1867E-10 34920 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.049 68.793 58.415 54.735 86.891 76.964 15.69 66.092 55 56 86 75 15 62 1 1 3 2 1 2 25265 20813 1157;2210 20036 48213;48214;48215;48216 55872;55873;55874;55875 55875 4 VGGAEGTK Unmodified 717.36572 0.36571815 491;2155 A2ALV3;Q62420;Q8BXU5;A2ALV1;Q62419 Sh3gl2;Sh3gl1 Endophilin-A1;Endophilin-A2 no no 0 0 0 0 8 3.56 1 1 1 34.245 34.245 2 0.0080957 7973 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.74 46.637 168.14 154.61 406.17 127.6 591.69 418.04 158 148 390 130 585 408 2 1 3 1 3 3 41758 20814 491;2155 20037 48217;48218;48219 55876;55877;55878 55877 3 VGGFPNFLSNAFVSTAK Unmodified 1754.8992 0.89917033 387 A0A2R8VH99;Q8VHN8 Nudt16l1 Protein syndesmos yes no 0 0 0 0 11.5 0.5 1 1 88.302 88.302 3 8.9163E-05 25104 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.52 47.581 0 84 30.296 0 29.288 0 0 84 28 0 28 0 0 1 1 0 1 0 6318.2 20815 387 20038 48220;48221 55879;55880 55880 2 VGGINLLTAGALAGVPAASLVTPADVIK Unmodified 2587.4949 0.49488841 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 10.2 3.42 1 2 3 1 2 100.53 100.53 3;4;5 4.7108E-25 32739 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.423 79.348 239.93 63.491 102 107.22 112.32 67.21 224 63 98 105 110 64 6 5 4 5 5 5 143690 20816 2396 20039 48222;48223;48224;48225;48226;48227;48228;48229;48230 55881;55882;55883;55884;55885;55886;55887;55888;55889;55890;55891;55892;55893 55883 13 VGGNLDSK Unmodified 788.40283 0.40283194 1104;2286;565 Q7TNB5;P23818;F6YNQ1;B0QZW1;F2Z488;G5E8H1 Gria1;Gria3;Gria2 Glutamate receptor 1 no no 0 0 0 0 6 0 1 43.231 43.231 2 0.0097414 12123 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.442 42.161 196.19 150.52 260.96 134.97 74.797 169.49 185 158 256 139 83 161 1 1 1 1 1 1 31907 20817 2286;565;1104 20040 48231 55894 55894 1 VGGTSDVEVNEK Unmodified 1232.5885 0.58846046 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 5.8 3.66 1 2 1 1 45.929 45.929 2;3 8.8321E-21 14073 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 152.85 105.3 259.58 234.59 260.14 184.98 259.81 443.78 243 235 250 185 258 422 2 2 3 4 2 2 113860 20818 1766 20041 48232;48233;48234;48235;48236 55895;55896;55897;55898;55899 55899 5 VGGTSDVEVNEK Deamidation (N) 1233.5725 0.57247604 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 1 0 0 3 0 1 47.829 47.829 3 0.044609 15649 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 43.991 17.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20819 1766 20041 48237 55900 55900 700 1 VGGVQSLGGTGALR Unmodified 1270.6993 0.69934831 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 7.17 3.53 1 1 1 2 1 53.302 53.302 2;3 2.275E-68 15401 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 212.27 153.68 781.6 521 291.63 690.28 868.19 812.34 732 522 282 659 887 783 5 3 3 4 6 4 233180 20820 1311 20042 48238;48239;48240;48241;48242;48243 55901;55902;55903;55904;55905;55906 55905 6 VGGYILGEFGNLIAGDPR Unmodified 1846.9577 0.95774784 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 10.2 1.72 1 1 1 1 1 94.529 94.529 3 1.9559E-07 33720 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.796 74.606 29.952 115.78 8.8364 121.89 38.874 59.696 28 113 9 112 38 56 1 6 1 4 2 2 105820 20821 1400;1401 20043 48244;48245;48246;48247;48248 55907;55908;55909;55910;55911;55912;55913;55914 55908 8 VGHDYQWIGLNDK Unmodified 1543.7419 0.74194141 851 E9QMK2;E9PYH0;E9QMK3;G3XA35;Q62059 Vcan Versican core protein yes no 0 0 0 0 13 0 1 60.491 60.491 3 0.00084188 21424 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.185 40.178 98.56 90.129 130.23 101.54 115.88 144.87 93 93 130 102 120 139 1 1 1 1 1 1 10719 20822 851 20044 48249 55915 55915 1 VGHFDPVTR Unmodified 1026.5247 0.52467841 3332 Q9WUD1 Stub1 STIP1 homology and U box-containing protein 1 yes yes 0 0 0 0 6 0 1 41.688 41.688 3 0.036013 11480 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.853 29.591 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20823 3332 20045 48250 55916 55916 1 VGHSELVGEIIR Unmodified 1307.7197 0.7197494 1596 P50516;D3Z1B9;D3YWH3;D3YZ23 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 6 0.816 1 1 1 54.229 54.229 3 2.1414E-60 17371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 208.63 142.93 316.3 184.7 243.83 314.17 305.84 268.43 297 195 250 306 315 260 4 3 4 4 4 4 171750 20824 1596 20046 48251;48252;48253 55917;55918;55919;55920 55919 4 VGHVGPLQIGQAVK Unmodified 1401.8092 0.80923311 2546 Q8CH72 Trim32 E3 ubiquitin-protein ligase TRIM32 yes yes 0 0 0 0 9 0 1 56.414 56.414 3 0.0070963 16188 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.88 21.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20825 2546 20047 48254 55921 55921 1 VGIADGHK Unmodified 795.4239 0.42390173 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 13 0 1 36.897 36.897 3 0.0048732 9879 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.38 43.159 0 0 115.99 92.371 125.75 174.43 0 0 111 93 130 167 0 0 1 1 1 1 18253 20826 2507 20048 48255 55922 55922 1 VGIDFLNY Unmodified 939.47018 0.47018322 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 10 3 1 1 89.77 89.77 2 0.017962 33295 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.454 50.116 39.613 17.545 0 20.767 8.3971 49.862 37 19 0 19 9 47 1 1 0 1 1 2 36812 20827 2585 20049 48256;48257 55923;55924 55923 2 VGIFPISYVEK Unmodified 1250.6911 0.69107503 213 A0A0R4J1W0;B2RXQ9;D3Z080;Z4YJR7;A0A0R4J1T1;B7ZWM6;B9EKP8;Q3UTJ2 Sorbs2 Sorbin and SH3 domain-containing protein 2 yes no 0 0 0 0 10 0 1 80.55 80.55 3 0.00065148 25334 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 72.006 43.607 39.414 56.926 0 0 65.675 67.416 37 56 0 0 65 65 1 1 0 0 1 1 5235.1 20828 213 20050 48258 55925 55925 1 VGIFTGAR Unmodified 819.46029 0.46028724 1568 P47857;A0A2R8VHV2;A0A2R8VHA5 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes no 0 0 0 0 10.5 0.5 1 1 53.992 53.992 2 0.00047349 13108 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 152.39 101.49 146.67 112.43 783.74 552.21 583.34 123.88 139 120 754 558 586 120 1 1 2 2 2 1 123350 20829 1568 20051 48259;48260 55926;55927 55927 2 VGIGAFPTEQDNEIGELLQTR Unmodified 2286.1492 0.14919002 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 5 0 1 85.291 85.291 3 0.02374 32503 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 29.84 19.676 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20830 1558 20052 48261 55928 55928 1 VGIGAFPTEQINEIGDLLQNR Unmodified 2283.1859 0.18590988 1144 J3QN31;P28650 Adssl1 Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 0 7 1 1 1 94.326 94.326 3 0.0055348 35690 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 34.689 21.631 0 0 40.034 0 29.288 0 0 0 37 0 28 0 0 0 1 0 1 0 826.46 20831 1144 20053 48262;48263 55929;55930 55929 2 VGIIDDDIFEEDENFLVHLSNVR Unmodified 2687.3079 0.3078755 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 5.5 0.5 1 1 97.07 97.07 3 2.4125E-11 35686 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.452 63.34 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 2914.5 20832 2187 20054 48264;48265 55931;55932 55931 2 VGINVGPVVAGVIGAR Unmodified 1476.8776 0.87764703 1266 O88444 Adcy1 Adenylate cyclase type 1 yes yes 0 0 0 0 10 0 2 78.559 78.559 2;3 0.0098651 24401 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.998 28.298 0 0 38.316 38.562 36.621 39.463 0 0 37 38 38 38 0 0 2 2 2 2 3510.1 20833 1266 20055 48266;48267 55933;55934 55934 2 VGINYQPPTVVPGGDLAK Deamidation (N) 1824.9622 0.96216452 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 1 0 0 7.5 2.63 1 2 1 1 1 72.551 72.551 3;4 4.6294E-07 25775 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 100.77 65.114 148.52 266.35 215.43 200.68 368.09 282.74 139 260 213 194 370 270 3 5 3 4 6 3 114350 20834 44;1313;1794;3223 20056 48268;48269;48270;48271;48272;48273 55935;55936;55937;55938;55939;55940 55936 16 6 VGINYQPPTVVPGGDLAK Unmodified 1823.9781 0.97814893 1313;1794;44;3223 A0A0A0MQA5;P68368;P05213;P68369;P05214;Q9JJZ2 Tuba4a;Tuba1b;Tuba1a;Tuba3a;Tuba8 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3 chain;Tubulin alpha-8 chain no no 0 0 0 0 8.89 2.05 1 5 4 3 2 1 1 2 71.258 71.258 2;3;4 1.8006E-26 23920 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 139.08 99.574 6592.9 5195.5 6457 6027.1 5059.1 6770.2 6201 5374 6497 5929 5153 6472 22 23 22 23 22 21 3664400 20835 44;1313;1794;3223 20056 48274;48275;48276;48277;48278;48279;48280;48281;48282;48283;48284;48285;48286;48287;48288;48289;48290;48291;48292 55941;55942;55943;55944;55945;55946;55947;55948;55949;55950;55951;55952;55953;55954;55955;55956;55957;55958;55959;55960;55961;55962;55963;55964;55965;55966;55967;55968;55969;55970;55971;55972;55973 55955 33 VGIPVTDENGTR Deamidation (N) 1257.6201 0.62009493 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 1 0 0 5 0 1 52.668 52.668 2 0.0018897 17230 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.192 49.42 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20836 2832 20057 48293 55974 55974 1003 1 VGIQTDEK Unmodified 888.45526 0.45526144 1566 P47791 Gsr Glutathione reductase, mitochondrial yes yes 0 0 0 0 6 0 1 44.841 44.841 2 0.011829 12886 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.853 25.78 0 0 60.592 0 104.74 56.707 0 0 56 0 102 56 0 0 1 0 1 1 4061.2 20837 1566 20058 48294 55975 55975 1 VGISGDSAGGNLAAALGQQFTYVASLK Unmodified 2594.334 0.33403068 2427 Q8BLF1 Nceh1 Neutral cholesterol ester hydrolase 1 yes yes 0 0 0 0 11.5 1.5 1 1 95.809 95.809 4 7.3997E-08 31309 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 56.562 42.69 40.496 36.371 15.964 49.557 45.84 19 38 37 19 47 46 19 1 1 1 1 1 1 6472 20838 2427 20059 48295;48296 55976;55977 55976 2 VGIVAWHPTAR Unmodified 1205.6669 0.66692597 3336 Q9WUM4;E9PX03 Coro1c Coronin-1C;Coronin yes no 0 0 0 0 10 0 1 52.277 52.277 3 0.033087 12551 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.109 13.367 98.874 0 153.84 130.23 143.18 164.34 93 0 148 130 148 158 1 0 1 1 1 1 12460 20839 3336 20060 48297 55978 55978 1 VGIVGNLSSGK Unmodified 1029.5819 0.58185894 1034 F8VQE9;Q8VHH5;A0A1D5RMG4;A0A0G2JDW1 Agap3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 yes no 0 0 0 0 9.5 0.5 1 1 58.866 58.866 2 8.7819E-10 15500 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.57 92.582 99.258 0 89.306 0 93.636 171.06 93 0 83 0 93 167 1 0 1 0 1 2 16714 20840 1034 20061 48298;48299 55979;55980 55980 2 VGKDELFALEQSCAQVVLQAANER Unmodified 2674.3385 0.33846413 2131 Q61553;A0A0G2JDU7 Fscn1 Fascin yes no 0 0 0 1 13 0 1 84.269 84.269 4 3.4224E-12 32885 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.222 60.766 0 38.094 76.183 35.9 0 49.036 0 37 74 37 0 46 0 1 1 1 0 1 10137 20841 2131 20062 48300 55981 55981 1 VGLAAVIIQDFR Unmodified 1300.7503 0.75032125 1954 Q3U186 Rars2 Probable arginine--tRNA ligase, mitochondrial yes yes 0 0 0 0 10 0 1 89.886 89.886 2 0.025588 29097 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 51.066 32.286 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 806.54 20842 1954 20063 48301 55982 55982 1 VGLENFLLR Unmodified 1059.6077 0.60767975 2771 Q91YJ2;A0A338P7D2 Snx4 Sorting nexin-4 yes no 0 0 0 0 10 0 1 77.594 77.594 2 0.016286 23861 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.371 21.021 49.074 56.275 0 0 67.99 0 46 56 0 0 65 0 1 1 0 0 1 0 5332.1 20843 2771 20064 48302 55983 55983 1 VGLGFELEA Unmodified 933.48075 0.48074791 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 6 0 1 84.238 84.238 2 0.027128 31406 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.788 53.964 0 0 0 30.079 27.906 0 0 0 0 28 28 0 0 0 0 1 1 0 8562.6 20844 1141 20065 48303 55984 55984 1 VGLIGSCTNSSYEDMGR Unmodified 1844.8033 0.80329739 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7 0 1 60.847 60.847 2 0.00067401 19723 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.435 51.109 20.346 8.2041 0 0 19.874 0 19 9 0 0 19 0 1 1 0 0 1 0 3275.1 20845 2843 20066 48304 55985 55985 1 VGLKAPGIIPR Unmodified 1119.7128 0.71281353 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 1 12 0 1 55.945 55.945 3 0.0090748 12549 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.63 43.963 284.31 281.03 309.27 224.94 252.13 215.6 268 287 312 227 258 209 1 1 1 1 1 1 15077 20846 1881 20067 48305 55986 55986 1 VGLLEALLPGQPEAVAR Unmodified 1731.9883 0.98831969 1604 Q3UEE2;P51855 Gss Glutathione synthetase yes no 0 0 0 0 9.5 0.5 1 1 89.409 89.409 3 3.3585E-05 31561 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.716 61.682 0 0 0 0 18 0 0 0 0 0 18 0 0 0 0 0 1 0 4269.7 20847 1604 20068 48306;48307 55987;55988 55987 2 VGLQVVAVK Unmodified 911.5804 0.58040237 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 11 1.41 1 1 1 1 1 62.373 62.373 2 0.00022454 16527 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.34 58.996 606.78 749.53 292.69 257.85 858.52 949.83 569 747 291 259 861 914 4 6 2 3 5 6 218610 20848 1766 20069 48308;48309;48310;48311;48312 55989;55990;55991;55992;55993;55994;55995 55992 7 VGLTNYAAAYCTGLLLAR Unmodified 1926.0033 0.003317824 1573 P47962;D3YYV8 Rpl5 60S ribosomal protein L5 yes no 0 0 0 0 6.5 5.5 1 1 82.106 82.106 2;3 0.001375 28729 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.347 31.384 29.933 0 18.67 38.988 18.083 0 28 0 19 37 19 0 1 0 1 1 1 0 3350 20849 1573 20070 48313;48314 55996;55997 55996 2 VGMQIPR Unmodified 799.43744 0.4374433 2736 Q91VD9;A0A087WQR0;A0A087WP77;A0A087WR47 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 8 0 1 48.601 48.601 2 0.05625 13216 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.234 28.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20850 2736 20071 48315 55998 55998 1 VGNGFEEGTTQGPLINEK Deamidation (N) 1889.9007 0.90068647 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 1 0 0 4 0.632 1 3 1 65.62 65.62 3;4 6.4091E-13 23250 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 118.32 98.267 175.4 118.02 82.998 87.898 141.04 67.504 167 121 83 84 140 65 5 4 2 3 3 2 32046 20851 2469 20072 48316;48317;48318;48319;48320 55999;56000;56001;56002;56003 56000 931;932 5 VGNGFEEGTTQGPLINEK 2 Deamidation (N) 1890.8847 0.88470206 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 2 0 0 4 0 1 67.106 67.106 3 0.0098965 24119 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.185 32.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20852 2469 20072 48321 56004 56004 931;932 1 VGNGFEEGTTQGPLINEK Unmodified 1888.9167 0.91667089 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 5 0 1 62.458 62.458 3 5.2076E-07 21930 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.049 64.762 0 29.792 0 29.762 44.743 58.419 0 28 0 28 46 56 0 1 0 1 1 1 4381.8 20853 2469 20072 48322 56005 56005 1 VGNIEIK Unmodified 771.44905 0.44905385 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 0 0 0 7 0 1 55.382 55.382 2 0.059108 17079 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.127 28.409 0 255.01 339.2 227.5 195.35 312.09 0 245 337 230 207 298 0 1 1 1 1 1 53630 20854 1690 20073 48323 56006 56006 1 VGNIEYFGMGGYYGFPLQYYPYYGK Oxidation (M) 2961.336 0.33600451 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 1 0 10 0 2 93.25 93.25 3;4 2.4021E-07 30320 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.147 50.348 29.831 0 35.782 19.2 28.022 19.454 28 0 34 20 28 19 2 0 2 2 1 1 9352.5 20855 1369 20074 48324;48325 56007;56008 56007 84 2 VGNIEYFGMGGYYGFPLQYYPYYGK Unmodified 2945.3411 0.34108989 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 0 11.5 1.26 2 1 1 2 97.746 97.746 3;4 2.1014E-16 27928 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.651 64.117 123.77 65.433 79.235 19.923 47.467 108.44 116 66 76 19 46 103 4 3 3 1 1 3 56928 20856 1369 20074 48326;48327;48328;48329;48330;48331 56009;56010;56011;56012;56013;56014;56015 56013 7 VGNLGLATSFFNER Unmodified 1523.7732 0.77324153 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 0 9.5 0.5 1 1 79.126 79.126 2 0.0001457 24586 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.17 52.346 20.387 28.36 85.652 55.049 94.091 19.168 19 28 83 56 93 19 1 1 1 1 2 1 14002 20857 2146 20075 48332;48333 56016;56017 56017 2 VGNLTVVGK Unmodified 885.52837 0.5283668 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 9 3.59 1 1 1 1 2 1 57.242 57.242 2;3 1.5353E-05 14790 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 149.72 84.944 1638.4 1310.7 1841.9 554.53 1597.9 1838.5 1543 1345 1805 552 1603 1762 5 4 5 2 5 4 407610 20858 1311 20076 48334;48335;48336;48337;48338;48339;48340 56018;56019;56020;56021;56022;56023;56024 56021 7 VGNPWDPNILYGPLHTK Unmodified 1919.9894 0.98938232 3122 Q9DBF1 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes yes 0 0 0 0 8.5 0.5 1 1 75.591 75.591 3 2.9691E-07 25183 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.16 85.419 60.088 136.61 102.17 0 164.22 0 56 130 102 0 157 0 1 1 1 0 2 0 27336 20859 3122 20077 48341;48342 56025;56026 56026 2 VGNTPETR Unmodified 872.43519 0.4351947 327 A0A1W2P7L7;P59708 Sf3b6 Splicing factor 3B subunit 6 yes no 0 0 0 0 4 0 1 28.795 28.795 2 0.031508 6341 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.016 27.949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20860 327 20078 48343 56027 56027 1 VGPDTER Unmodified 772.37153 0.37153181 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 3 0.816 1 1 1 29.343 29.343 2 0.026678 7023 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 99.139 46.456 471.17 510.78 514.52 303.67 281.24 703 444 518 510 290 279 667 2 3 2 2 1 3 140680 20861 1876 20079 48344;48345;48346 56028;56029;56030 56029 3 VGPVPWLGPQTDEAIK Unmodified 1705.9039 0.90392136 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 7 0 1 78.615 78.615 3 0.0041573 27974 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 45.084 22.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20862 1433 20080 48347 56031 56031 1 VGQAVALR Unmodified 812.48684 0.48683634 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 7.5 0.5 1 1 44.13 44.13 2 0.044675 11899 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.803 7.5573 226.03 177.03 273.13 114.17 116.11 138.58 213 185 268 111 111 130 2 2 2 1 1 1 36859 20863 114 20081 48348;48349 56032;56033 56032 2 VGQAVDVVGQAGKPK Unmodified 1451.8096 0.80962704 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 1 8 0 1 53.267 53.267 3 4.9267E-07 15431 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.44 89.187 59.91 35.328 0 80.882 0 0 56 37 0 74 0 0 1 1 0 1 0 0 5930.7 20864 2697 20082 48350 56034 56034 1 VGQGYPHDPPK Unmodified 1193.5829 0.58292157 1686 P61082;F7CDT0;F6WMC0 Ube2m NEDD8-conjugating enzyme Ubc12 yes no 0 0 0 0 6 0 1 39.308 39.308 3 0.0049944 10352 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.471 30.089 59.281 83.227 65.038 0 84.521 66.878 56 83 65 0 83 65 1 1 1 0 1 1 9666.8 20865 1686 20083 48351 56035 56035 1 VGQLFAAWK Unmodified 1018.56 0.56000128 2329 Q80WM4 Hapln4 Hyaluronan and proteoglycan link protein 4 yes yes 0 0 0 0 6 5.49 6 1 3 1 79.461 79.461 2;3 0.00022771 29544 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.27 0 1185.1 1137.4 468.11 1257 919.1 1379 1110 1137 455 1182 961 1316 6 7 6 8 6 7 222820 20866 2329 20084 48352;48353;48354;48355;48356;48357;48358;48359;48360;48361;48362 56036;56037;56038;56039;56040;56041;56042;56043;56044;56045;56046;56047;56048;56049;56050 56050 15 VGQLLKDPK Unmodified 996.59678 0.59678072 3110 Q9DB20;A0A338P776 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 1 10.7 1.7 1 1 1 55.093 55.093 3 0.0099363 13874 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.551 31.44 1815 1280.6 2254.2 1217.9 1105.6 2192.1 1710 1354 2213 1201 1105 2086 3 3 3 2 2 3 198300 20867 3110 20085 48363;48364;48365 56051;56052;56053 56052 3 VGSAAQTR Unmodified 788.41407 0.41406533 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 8.5 2.99 1 1 1 1 1 1 25.482 25.482 2 0.0028833 4446 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.98 49.147 330.92 600.09 421.23 553.52 806.19 425.14 312 591 436 540 809 413 5 7 6 7 8 5 394520 20868 1881 20086 48366;48367;48368;48369;48370;48371 56054;56055;56056;56057;56058;56059;56060;56061 56054 8 VGSEIER Unmodified 788.40283 0.40283194 3020 Q9D0E1;B8JK33;B8JK32;F6W322 Hnrnpm Heterogeneous nuclear ribonucleoprotein M yes no 0 0 0 0 4 0 1 35.943 35.943 2 0.043851 9645 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.178 19.491 0 98.952 0 89.041 89.212 115.78 0 93 0 83 93 111 0 1 0 1 1 1 9344.6 20869 3020 20087 48372 56062 56062 1 VGSHITGGDIYGIVNENSLIK Unmodified 2185.1379 0.13789705 1596 P50516;D3Z1B9;D3YWH3 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 7.2 1.17 2 1 1 1 71.984 71.984 3;4 5.8565E-11 25845 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.22 73.341 168.51 268.3 328.39 247.04 139.83 118.14 158 268 324 241 139 112 2 4 3 3 3 2 60417 20870 1596 20088 48373;48374;48375;48376;48377 56063;56064;56065;56066;56067 56064 5 VGSIFLQLK Unmodified 1003.6066 0.60661712 523 A2AU52;Q8BG94 Commd7 COMM domain-containing protein 7 yes no 0 0 0 0 12 0 1 79.406 79.406 2 0.0023607 21478 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.358 33.359 20.281 20.976 0 20.767 0 26.65 19 21 0 19 0 25 1 1 0 1 0 1 2412.2 20871 523 20089 48378 56068 56068 1 VGSIPANAADDGQWSQGLISAAR Unmodified 2283.1244 0.12437225 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 6 0 1 72.323 72.323 3 3.1743E-05 25902 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.972 29.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20872 287 20090 48379 56069 56069 1 VGSLDNAHHVPGGGNVK Unmodified 1656.8332 0.83321603 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 0 6.5 0.5 1 1 41.532 41.532 4 2.2734E-06 10496 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.463 54.799 108.36 79.086 114.81 48.687 186.61 135.67 102 83 111 46 185 130 1 1 1 1 2 1 19112 20873 1424 20091 48380;48381 56070;56071 56071 2 VGSLQATAK Unmodified 873.49198 0.4919813 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 8 0 1 46.691 46.691 2 0.0016457 12366 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.355 32.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20874 82 20092 48382 56072 56072 1 VGSLYPEMSAHER Unmodified 1474.6875 0.68746299 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 6 0 1 49.906 49.906 3 0.059459 15315 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 33.204 18.513 0 58.811 46.243 0 29.288 0 0 56 46 0 28 0 0 1 1 0 1 0 2629.4 20875 895 20093 48383 56073 56073 1 VGSPSSR Unmodified 688.3504 0.35040244 1634 P56375 Acyp2 Acylphosphatase-2 yes yes 0 0 0 0 6 0 1 23.75 23.75 2 0.051925 3682 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.035 17.348 33.011 49.91 0 69.687 72.224 57.635 31 49 0 65 74 56 1 1 0 1 1 1 5764.4 20876 1634 20094 48384 56074 56074 1 VGSTENIK Unmodified 846.4447 0.44469675 860;1464 P27546;A0A140T8T5;A0A0G2JFT4;A0A0G2JDY5;E9PZ43;A0A0G2JDN7;A0A0G2JFK3 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 6 0 1 42.613 42.613 2 0.0057469 11880 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 111.95 51.796 127.5 97.771 129.23 110.52 165.01 133.87 120 102 130 111 167 130 1 1 1 1 1 1 9168.1 20877 1464;860 20095 48385 56075 56075 1 VGSVLQEGCEK Unmodified 1204.5758 0.57578728 2597 Q8K2B3 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 53.356 53.356 2;3 3.6952E-05 16991 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.45 64.254 227.76 250.03 100.55 103.42 213.78 124.17 214 251 102 102 213 121 4 4 2 3 4 2 29469 20878 2597 20096 48386;48387;48388;48389 56076;56077;56078;56079 56077 4 VGTFGFLALPGSR Unmodified 1320.719 0.71902112 80 A0A0G2JDM6;P21836 Ache Acetylcholinesterase yes no 0 0 0 0 6.5 5.5 1 1 82.246 82.246 2 0.00042501 22745 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.625 43.268 118.83 30.73 20.207 0 119.69 47.791 111 32 19 0 116 47 2 1 1 0 3 2 6877.7 20879 80 20097 48390;48391 56080;56081;56082 56082 3 VGTLDVLVGLSDELAK Unmodified 1627.9033 0.90325265 3376 Q9Z1G3;A0A2I3BPD0 Atp6v1c1 V-type proton ATPase subunit C 1 yes no 0 0 0 0 8.5 2.69 1 1 1 1 96.821 96.821 3 7.1934E-08 35592 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.35 90.102 35.291 100.02 50.15 113.65 132.45 35.178 33 94 47 107 131 33 2 3 3 5 5 2 29008 20880 3376 20098 48392;48393;48394;48395 56083;56084;56085;56086;56087;56088;56089 56084 7 VGVDPLIIPTDYWK Unmodified 1614.8657 0.86574494 1967 Q3UE92;Q6P1B1;S4R1I3 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 9.25 2.28 1 1 1 1 88.775 88.775 3 5.029E-05 34954 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.069 61.116 79.988 83.372 36.519 149.42 17.353 89.049 75 84 37 139 19 84 2 3 1 4 1 3 14324 20881 1967 20099 48396;48397;48398;48399 56090;56091;56092;56093 56093 4 VGVFSYGSGLAATLYSLK Unmodified 1831.972 0.97200092 2563 Q8JZK9 Hmgcs1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 0 12 0 1 94.52 94.52 3 0.0023165 27098 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.913 22.25 30.044 0 0 0 47.158 58.35 28 0 0 0 47 56 1 0 0 0 2 2 1297.9 20882 2563 20100 48400 56094;56095 56094 2 VGVFYVENPFFGQR Unmodified 1657.8253 0.8252771 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 10 0 1 86.29 86.29 2 0.0017894 27680 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.726 49.917 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 1441.3 20883 1893 20101 48401 56096 56096 1 VGVGTSYGLPQAR Unmodified 1303.6884 0.68844927 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 7 0 1 54.869 54.869 2 0.012731 16782 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.276 24.762 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20884 3165 20102 48402 56097 56097 1 VGVKPVGSDPDFQPELSGAGSR Unmodified 2198.0968 0.096760517 2525 Q8CDN6 Txnl1 Thioredoxin-like protein 1 yes yes 0 0 0 1 6 0 1 59.583 59.583 3 0.00027382 19906 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.132 40.602 59.383 64.083 64.17 45.244 64.291 47.201 56 65 65 46 65 46 1 1 1 1 1 1 6077.8 20885 2525 20103 48403 56098 56098 1 VGVLGFLSTGDQAAK Unmodified 1461.7827 0.78274359 462 A2AGI2;Q8BYM5;A2AGI0;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 10 0 1 79.319 79.319 3 3.7038E-08 24663 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.74 77.895 78.571 52.697 95.081 44.611 0 59.696 74 56 93 46 0 56 1 1 1 1 0 1 14538 20886 462 20104 48404 56099 56099 1 VGVNGFGR Deamidation (N) 805.40825 0.40825167 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R1N5;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 6.2 0.748 1 2 2 48.863 48.863 2 0.0050434 13840 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 154.92 51.939 3649.4 3202.7 4304 3511 4770.3 4273.9 3440 3309 4317 3529 4855 4137 5 5 5 5 5 5 1122400 20887 1395;3448 20105 48405;48406;48407;48408;48409 56100;56101;56102;56103;56104 56103 470 5 VGVPTETGALTLNR Unmodified 1426.778 0.77799256 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 60.342 60.342 2 4.5539E-16 20338 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 126.66 77.291 59.587 73.935 46.823 49.269 17.805 19.746 56 74 46 47 19 19 1 2 1 2 1 1 14549 20888 2472 20106 48410;48411;48412 56105;56106;56107 56105 3 VGVVDEVVPEDQVHSK Unmodified 1734.8788 0.87882882 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 3 0 1 57.164 57.164 3 0.00014664 19932 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.965 49.048 20.387 0 0 49.416 45.846 0 19 0 0 46 46 0 1 0 0 1 1 0 3025.5 20889 1541 20107 48413 56108 56108 1 VGWELLLTTIAR Unmodified 1370.7922 0.79218606 3209 Q9JI91;A0A1Y7VMW4 Actn2 Alpha-actinin-2 yes no 0 0 0 0 11.5 0.5 1 1 97.049 97.049 2 0.00065099 27842 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.831 53.744 39.387 0 0 0 9.414 0 38 0 0 0 9 0 2 0 0 0 1 0 8060.7 20890 3209 20108 48414;48415 56109;56110 56110 2 VGWEQLLTTIAR Unmodified 1385.7667 0.76669959 418;310 A1BN54;Q7TPR4;A0A1L1SV25;P57780 Actn1;Actn4 Alpha-actinin-1;Alpha-actinin-4 no no 0 0 0 0 11 1.41 1 1 1 1 1 89.177 89.177 2;3 7.6643E-14 28946 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.91 92.832 231.66 65.721 0 109.61 99.678 70.4 223 68 0 102 102 68 3 3 0 2 2 2 131950 20891 418;310 20109 48416;48417;48418;48419;48420 56111;56112;56113;56114;56115;56116;56117 56113 7 VGYFGPTQFYVALK Unmodified 1588.829 0.8289655 457 B1AV20;A2AFI8;B9EI38 Reps2 yes no 0 0 0 0 11 0 1 85.2 85.2 3 0.032536 26839 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 38.799 14.812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20892 457 20110 48421 56118 56118 1 VGYFPSSLGEAIVK Unmodified 1465.7817 0.78168095 2226 Q6P9K8 Caskin1 Caskin-1 yes yes 0 0 0 0 10 0 1 78.064 78.064 3 0.0033295 24132 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.46 29.507 59.756 0 55.838 75.662 100.61 76.013 56 0 55 74 102 74 1 0 1 1 1 1 2499.2 20893 2226 20111 48422 56119 56119 1 VGYTPDWIFLLR Unmodified 1478.7922 0.79218606 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 11.3 1.49 1 1 1 1 2 93.445 93.445 2;3 5.8239E-05 37242 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.171 52.875 97.42 163.43 150.4 95.033 271.91 117 93 158 139 88 263 111 3 4 2 3 4 2 154680 20894 2185 20112 48423;48424;48425;48426;48427;48428 56120;56121;56122;56123;56124;56125;56126;56127 56126 8 VHACGVNPVETYIR Unmodified 1613.7984 0.79841043 1560 P47199;A0A0A6YXR4;D3YWU6;D3Z4Q4;D3Z2X0;D3YUG9;V9GXY8 Cryz Quinone oxidoreductase yes no 0 0 0 0 13 0 1 50.876 50.876 3 0.011659 16742 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.813 27.922 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20895 1560 20113 48429 56128 56128 1 VHAELADVLTEAVVDSILAIR Unmodified 2233.2318 0.23179744 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 13 0 2 113.08 113.08 3;4 1.0365E-09 44664 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.917 61.769 6.438 0 0 0 7.322 0 6 0 0 0 7 0 1 0 0 0 1 0 1760.4 20896 1826 20114 48430;48431 56129;56130 56129 2 VHAENGELVAEGAK Unmodified 1422.7103 0.71030693 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 4.5 0.5 1 1 43.876 43.876 3 4.6109E-05 13401 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.703 59.505 79.08 84.044 0 61.208 46.807 146.84 74 84 0 56 46 139 1 2 0 1 1 2 9280.1 20897 3172 20115 48432;48433 56131;56132 56131 2 VHAENGELVAEGAK Deamidation (N) 1423.6943 0.69432251 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 1 0 0 4 0 2 46.981 46.981 3;4 0.00012956 14862 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.311 37.123 109.21 28.836 97.096 37.031 86.818 0 102 28 93 37 83 0 2 1 2 1 1 0 12714 20898 3172 20115 48434;48435 56133;56134;56135 56134 1098 3 VHAIPLR Unmodified 804.49701 0.49700709 1751;1750 P62880;E9QKR0;D3Z1M1;D3YZX3;D3Z1T4;P62874;H3BKR2;H3BLF7;Q61011 Gnb2;Gnb1;Gnb3 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 no no 0 0 0 0 8 0 1 39.102 39.102 2 0.024187 8821 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.12 45.867 177.5 138.46 166.76 203.47 217.64 0 167 144 171 199 217 0 1 1 1 1 1 0 16460 20899 1751;1750 20116 48436 56136 56136 1 VHAYIISSLK Unmodified 1129.6495 0.64954457 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 6.5 5.5 1 1 58.424 58.424 3 0.0020256 13270 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.228 30.86 48.879 194.91 236.45 180.53 182.75 222.91 46 190 237 178 188 214 1 2 2 1 1 2 36966 20900 3271;3353 20117 48437;48438 56137;56138 56138 2 VHCLNTLFSR Unmodified 1245.6288 0.6288259 1624 P54823 Ddx6 Probable ATP-dependent RNA helicase DDX6 yes yes 0 0 0 0 11 0 1 53.632 53.632 3 0.0049137 13053 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.37 40.561 0 59.584 0 61.208 0 0 0 56 0 56 0 0 0 1 0 1 0 0 9378.8 20901 1624 20118 48439 56139 56139 1 VHEEEIR Unmodified 910.45084 0.45084476 1493 P31001 Des Desmin yes yes 0 0 0 0 1 0 1 28.592 28.592 3 0.016862 6126 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.176 8.3769 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20902 1493 20119 48440 56140 56140 1 VHELEQQNK Unmodified 1123.5622 0.56218613 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 7.67 3.82 1 2 1 2 36.754 36.754 3;4 1.9541E-06 9731 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 152.11 95.382 912.35 850.58 1003.4 517.18 786.67 454.27 858 873 991 514 780 434 7 9 8 6 5 4 132240 20903 1329 20120 48441;48442;48443;48444;48445;48446 56141;56142;56143;56144;56145;56146;56147;56148;56149 56143 9 VHGVSQLIK Unmodified 979.58147 0.581465 224 A2RTH5;A0A0U1RNF2 Lcmt1 yes no 0 0 0 0 9 0 1 48.416 48.416 3 0.0022988 12354 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.233 43.158 178.24 162.28 202.63 143.13 0 0 168 167 203 142 0 0 1 1 1 1 0 0 9268.4 20904 224 20121 48447 56150 56150 1 VHHEPQLSDK Unmodified 1188.5887 0.58873523 1060 G3UY49;G3UWV3;G3UWR0;Q6XLQ8;O35887 Calu Calumenin yes no 0 0 0 0 5 0 1 34.004 34.004 4 0.008283 8303 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.49 32.286 39.564 27.124 0 30.604 0 20.254 37 28 0 28 0 19 1 1 0 1 0 1 1452.2 20905 1060 20122 48448 56151 56151 1 VHIEIGPDGR Unmodified 1091.5724 0.57235688 1209;1808;3401 O35737;Q8C2Q7;P70333;Q9Z2X1 Hnrnph1;Hnrnph2;Hnrnpf Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed no no 0 0 0 0 8 3.56 1 1 1 46.38 46.38 3 3.2777E-05 13727 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.568 60.546 246.84 142.7 231.08 227.62 124.95 154.2 232 149 232 223 129 148 4 3 4 4 2 3 62589 20906 1209;1808;3401 20123 48449;48450;48451 56152;56153;56154;56155 56154 4 VHIISFK Unmodified 842.50142 0.50142377 3098 Q9D964 Gatm Glycine amidinotransferase, mitochondrial yes yes 0 0 0 0 12 0 1 55.625 55.625 3 0.017968 12388 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.035 47.675 39.701 0 0 8.9397 47.705 0 37 0 0 9 46 0 1 0 0 1 1 0 3190.8 20907 3098 20124 48452 56156 56156 1 VHINPNSLFDVQVK Deamidation (N) 1609.8464 0.84640648 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 1 0 0 9 0 1 69.442 69.442 3 0.0026277 22390 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.598 35.275 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20908 3331 20125 48453 56157 56157 1129 1 VHKEDDGVPVICQVEHPAVTGNLQTQR Unmodified 3025.504 0.50396633 856 Q8R5M8;E9PYN1;E0CY16 Cadm1 Cell adhesion molecule 1 yes no 0 0 0 1 9 4 1 1 54.21 54.21 5 0.0019231 17491 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 37.424 21.905 69.117 150.22 155.21 119.03 153.18 192.84 65 148 157 120 158 185 1 2 2 2 2 2 9554.9 20909 856 20126 48454;48455 56158;56159 56159 2 VHLAEPSGDPAK Unmodified 1219.6197 0.619701 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 0 13 0 1 42.928 42.928 3 0.0050973 12956 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.013 21.955 208.61 124.25 0 182.53 0 178.02 195 130 0 167 0 167 1 1 0 1 0 1 19156 20910 3101 20127 48456 56160 56160 1 VHLIVQVSPK Unmodified 1118.6812 0.68117905 765 D3Z396;Q8BG33;Q99PJ0 Ntm Neurotrimin yes no 0 0 0 0 11 0.816 1 1 1 55.606 55.606 2;3 3.2758E-05 12443 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 99.815 70.713 0 125.88 422.12 410.32 207.81 303.41 0 120 414 402 213 288 0 1 3 3 2 2 62136 20911 765 20128 48457;48458;48459 56161;56162;56163;56164 56164 4 VHLTDAEK Unmodified 911.47125 0.47124585 562;1299 A8DUK4;P02088;E9Q223;P02089 Hbbt1;Hbb-b1;Hbb-bs;Hbb-b2 Hemoglobin subunit beta-1;Hemoglobin subunit beta-2 no no 0 0 0 0 7.75 3.11 1 1 1 1 40.587 40.587 2;3 3.1004E-25 11612 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 197.3 110.51 613.07 760.37 1153.1 1075.6 1340.9 916.87 578 764 1155 1070 1347 896 2 2 4 4 2 3 120270 20912 562;1299 20129 48460;48461;48462;48463 56165;56166;56167;56168 56165 4 VHLTQLLEK Unmodified 1079.6339 0.63389451 2386 Q8BGT8;F7D3N3;F6U6Z2 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 0 9 0 1 61.032 61.032 3 0.032117 18450 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 44.309 27.677 0 69.16 0 61.208 0 78.884 0 65 0 56 0 74 0 1 0 1 0 1 10538 20913 2386 20130 48464 56169 56169 1 VHLVGIDIFTGK Unmodified 1297.7394 0.73942221 51 A0A0A0MQM0;P63242;Q8BGY2 Eif5a;Eif5a2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 0 11 1.41 1 1 1 1 1 74.147 74.147 3 1.0815E-08 22432 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.42 90.099 364.27 324.47 369.12 444.45 478.84 315.13 342 329 368 435 486 304 3 3 3 5 4 2 253750 20914 51 20131 48465;48466;48467;48468;48469 56170;56171;56172;56173;56174 56171 5 VHLVGIDIFTGKK Unmodified 1425.8344 0.83438523 51 A0A0A0MQM0;P63242;Q8BGY2 Eif5a;Eif5a2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 yes no 0 0 0 1 11.5 0.5 1 1 67.72 67.72 4 0.00087026 18911 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 62.258 31.708 0 47.979 57.713 0 0 0 0 46 56 0 0 0 0 1 1 0 0 0 17124 20915 51 20132 48470;48471 56175;56176 56175 2 VHNDAQNFDYDHDAFLGAEEAK Deamidation (N) 2506.0673 0.067310882 1060 G3UY49;G3UWV3;G3UWR0;Q6XLQ8;O35887 Calu Calumenin yes no 0 1 0 0 4 0 1 57.921 57.921 4 4.7268E-09 20031 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.325 49.137 23.242 24.356 40.468 27.696 26.358 48.284 22 25 40 28 28 46 1 1 1 1 1 1 3721.5 20916 1060 20133 48472 56177 56177 281 1 VHPAVVIR Unmodified 889.54977 0.54977095 1745 P62830 Rpl23 60S ribosomal protein L23 yes yes 0 0 0 0 8 0 1 37.871 37.871 3 0.0026301 8253 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.284 57.711 69.084 43.037 74.669 55.406 71.891 86.427 65 46 74 56 74 83 1 1 1 1 1 1 7468.8 20917 1745 20134 48473 56178 56178 1 VHPEAQAK Unmodified 878.46102 0.46101552 1067 G3UXZ5;P97371;G3UXY0;G3X9K9;G3UWN9 Psme1 Proteasome activator complex subunit 1 yes no 0 0 0 0 9.5 3.5 1 1 29.956 29.956 3 0.003074 6138 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.41 68.291 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20918 1067 20135 48474;48475 56179;56180 56179 2 VHPISTMIK Unmodified 1024.5739 0.57393679 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 6.67 4.03 1 1 1 49.825 49.825 3 0.00016729 11561 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 113.66 77.714 725.61 536.79 402.09 721.25 708.32 485.36 681 553 409 694 723 469 3 2 1 3 2 1 76239 20919 1315 20136 48476;48477;48478 56181;56182;56183 56183 3 VHQLETQNR Unmodified 1123.5734 0.57341951 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 6 0.816 1 1 1 29.055 29.055 3 5.8132E-06 5515 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143.37 100.29 297.84 176.03 107.13 225.71 270.51 328.07 279 186 107 217 278 315 4 4 1 3 3 4 67852 20920 1557 20137 48479;48480;48481 56184;56185;56186;56187 56185 4 VHQLYETIQR Unmodified 1285.6779 0.67788459 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 7.5 0.5 1 1 47.696 47.696 3 0.0018884 13459 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.08 38.353 118.53 0 96.983 72.853 166.06 123.18 111 0 93 74 166 120 2 0 1 1 2 2 20411 20921 2844 20138 48482;48483 56188;56189 56188 2 VHQVLYR Unmodified 913.51339 0.51338544 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 10.7 1.7 1 1 1 35.18 35.18 3 0.0050814 6853 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.07 41.82 108 203.35 129.92 82.976 77.404 20.254 102 200 130 83 74 19 2 3 1 1 1 1 21310 20922 1608 20139 48484;48485;48486 56190;56191;56192 56190 3 VHSEVSSLDSR Unmodified 1214.5891 0.58912916 3305 Q9R0X4 Acot9 Acyl-coenzyme A thioesterase 9, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 35.3 35.3 3 0.0092899 9396 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.484 35.966 59.682 0 68.157 66.305 36.061 87.449 56 0 66 65 37 83 2 0 2 2 1 2 4939.9 20923 3305 20140 48487;48488 56193;56194 56193 2 VHSFPTLK Unmodified 927.5178 0.51780212 1331 P09103;E9Q8G8 P4hb Protein disulfide-isomerase yes no 0 0 0 0 12 1 1 1 49.639 49.639 3 0.0067844 11553 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.905 48.398 0 286.22 0 242.65 0 168.43 0 269 0 222 0 158 0 2 0 2 0 1 14348 20924 1331 20141 48489;48490 56195;56196 56195 2 VHSPYEVSIR Unmodified 1185.6142 0.6142217 2670 Q8R570;B2FDF6 Snap47 Synaptosomal-associated protein 47 yes no 0 0 0 0 6 0 1 44.871 44.871 3 0.0011036 12930 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.944 43.01 0 28.989 48.033 0 37.714 28.772 0 28 46 0 37 28 0 1 1 0 1 1 6537.4 20925 2670 20142 48491 56197 56197 1 VHVIFNYK Unmodified 1018.56 0.56000128 1375 P14211 Calr Calreticulin yes yes 0 0 0 0 9.25 4.82 1 1 1 1 55.675 55.675 3 0.0021735 12362 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.887 63.813 297.21 61.064 130.78 361.82 222.9 158.83 278 65 130 342 222 149 4 2 2 4 2 2 142320 20926 1375 20143 48492;48493;48494;48495 56198;56199;56200;56201;56202;56203 56201 6 VHVIQPK Unmodified 819.49667 0.49667274 917 E9Q6B6;E9Q6E0;J3QNR6;K3W4S4;Q9ESN9 Mapk8ip3 C-Jun-amino-terminal kinase-interacting protein 3 yes no 0 0 0 0 9.5 0.5 1 1 39.977 39.977 3 0.040676 7763 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.231 36.85 158.01 236.19 0 111.49 0 296.35 148 232 0 102 0 278 1 2 0 1 0 2 8732.7 20927 917 20144 48496;48497 56204;56205 56205 2 VHVLWWNESADSR Deamidation (N) 1598.7478 0.74775506 2923 Q9CQE1 Nipsnap3b Protein NipSnap homolog 3B yes yes 0 1 0 0 9 0 1 63.614 63.614 3 0.018881 19614 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.189 38.368 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20928 2923 20145 48498 56206 56206 1026 1 VHYGCVIFVR Unmodified 1248.6437 0.64374769 1944 Q3TXX4;A0A1B0GRU0;A0A0R4J0A6;Q8BLE7;A0A140LHC9 Slc17a7;Slc17a6 Vesicular glutamate transporter 1;Vesicular glutamate transporter 2 yes no 0 0 0 0 9 0 1 54.422 54.422 3 1.2137E-05 15192 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.57 90.798 0 39.368 0 50.278 0 99.138 0 37 0 46 0 93 0 1 0 1 0 1 14717 20929 1944 20146 48499 56207 56207 1 VHYLEQQNK Unmodified 1157.5829 0.58292157 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 9.4 3.01 1 1 1 2 40.794 40.794 2;3;4 6.929E-06 11498 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.83 98.766 582.08 358.81 369.49 396.77 904.12 615.74 545 361 370 383 902 597 4 4 5 3 6 4 78745 20930 154 20147 48500;48501;48502;48503;48504 56208;56209;56210;56211;56212;56213 56213 6 VIAAATQCALSTSQLVACAK Unmodified 2062.0551 0.055095398 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 11.7 0.471 1 2 80.758 80.758 3;4 4.4086E-14 22046 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 115.34 96.885 69.415 65.543 0 50.712 81.052 68.29 65 66 0 47 83 65 2 2 0 1 2 2 19443 20931 287 20148 48505;48506;48507 56214;56215;56216;56217 56217 4 VIAALLQTMEDQGNQR Unmodified 1785.9043 0.90433206 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 11.5 0.5 1 1 92.381 92.381 3 2.6905E-05 26421 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.281 44.563 0 0 30.296 0 0 29.848 0 0 28 0 0 28 0 0 1 0 0 1 15169 20932 2422 20149 48508;48509 56218;56219 56219 2 VIADNVK Unmodified 757.4334 0.43340378 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 8 2.61 2 1 1 1 47.718 47.718 2;3 0.0072946 13473 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.4 37.491 969.48 939.9 939.01 1050.7 1483.2 1304 912 956 932 1030 1502 1263 4 4 4 4 4 5 391540 20933 1405 20150 48510;48511;48512;48513;48514 56220;56221;56222;56223;56224 56222 5 VIADNVKDWSK Unmodified 1273.6667 0.6666512 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 1 9 0 1 59.978 59.978 3 0.0035216 17804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.395 39.271 186.68 161.28 228.5 0 239.53 0 176 167 221 0 229 0 1 1 1 0 1 0 8381.1 20934 1405 20151 48515 56225 56225 1 VIAGASK Unmodified 644.38573 0.38572531 2037 Q569Z6;Q8BZN7 Thrap3 Thyroid hormone receptor-associated protein 3 yes no 0 0 0 0 9 0 1 42.215 42.215 2 0.027191 9727 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.906 40.94 0 0 0 96.184 0 123.66 0 0 0 88 0 116 0 0 0 1 0 1 5939.1 20935 2037 20152 48516 56226 56226 1 VIAGFSLLNLLFK Unmodified 1433.8646 0.86462272 2300 Q80TB8 Vat1l Synaptic vesicle membrane protein VAT-1 homolog-like yes yes 0 0 0 0 13 0 1 112.53 112.53 3 8.4093E-05 44612 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.692 44 0 0 9.738 0 0 9.594 0 0 9 0 0 9 0 0 1 0 0 1 526.08 20936 2300 20153 48517 56227 56227 1 VIAINVDDPDAANYK Deamidation (N) 1617.7886 0.78861683 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 1 0 0 6 0 1 68.559 68.559 3 0.013392 24252 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.408 27.58 48.953 0 68.086 44.84 73.366 57.602 46 0 65 46 74 56 1 0 1 1 1 1 7955.1 20937 3085 20154 48518 56228 56228 1071 1 VIAINVDDPDAANYKDISDVER Unmodified 2431.1867 0.18669774 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 1 5 0 1 70.233 70.233 4 4.1225E-12 25452 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.847 60.916 207.99 34.026 0 69.705 71.233 125.89 194 37 0 65 74 120 2 1 0 1 1 2 6475.8 20938 3085 20155 48519 56229;56230 56229 2 VIAISMLK Unmodified 873.53576 0.53576037 270 A0A1D5RLE0;E9QMR2;A0A1D5RMM1;F8VPN7;Q8BIK4 Dock9 Dedicator of cytokinesis protein 9 yes no 0 0 0 0 1 0 1 74.041 74.041 2 0.013224 25294 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 87.616 39.112 69.567 0 29.945 0 38.702 0 65 0 28 0 37 0 1 0 1 0 1 0 1891 20939 270 20156 48520 56231 56231 1 VIALIGIATAADGLVTQYHALPVETQK Unmodified 2791.5484 0.54838055 2242 Q6PE15 Abhd10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial yes yes 0 0 0 0 12 0 1 99.079 99.079 4 0.00041736 28269 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 41.763 28.575 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1727.3 20940 2242 20157 48521 56232 56232 1 VIALINDQR Unmodified 1040.5978 0.59784335 147 A0A0R4IZZ1;Q03157 Aplp1 Amyloid-like protein 1;C30 yes no 0 0 0 0 9 0 1 61.589 61.589 2 0.02653 18648 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.59 25.782 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20941 147 20158 48522 56233 56233 1 VIALKAGK Unmodified 798.53272 0.5327239 2185 Q68FD5 Cltc Clathrin heavy chain 1 yes yes 0 0 0 1 1 0 1 52.037 52.037 3 0.044556 15876 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.782 10.021 239.77 175.49 310.03 209.29 151.69 206.74 226 185 306 211 161 198 1 1 1 1 1 1 11672 20942 2185 20159 48523 56234 56234 1 VIANLDYSDFQIVK Unmodified 1623.8508 0.85082315 1635 P56376;E9QJT5 Acyp1 Acylphosphatase-1;Acylphosphatase yes no 0 0 0 0 10 2.16 1 1 1 82.976 82.976 3 1.6297E-07 28721 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.746 50.742 69.372 162.37 47.659 228.4 83.174 78.884 65 157 46 213 83 74 1 2 1 3 1 1 17053 20943 1635 20160 48524;48525;48526 56235;56236;56237;56238 56236 4 VIANQQSR Unmodified 914.49338 0.49337828 632 B7ZCL8;P70290;A2AN84;B7ZCM0 Mpp1 55 kDa erythrocyte membrane protein yes no 0 0 0 0 7 0 1 30.38 30.38 2 0.058838 5533 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.895 17.081 19.08 18.534 23.678 0 0 9.594 18 19 23 0 0 9 1 1 1 0 0 1 2124.8 20944 632 20161 48527 56239 56239 1 VIAQTVYGAK Unmodified 1048.5917 0.59169534 2023 Q3V3R1 Mthfd1l Monofunctional C1-tetrahydrofolate synthase, mitochondrial yes yes 0 0 0 0 10 0 1 56.42 56.42 2 0.0013443 14420 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 91.265 39.693 19.853 37.055 58.269 0 0 0 19 37 56 0 0 0 1 1 1 0 0 0 4787.1 20945 2023 20162 48528 56240 56240 1 VIASMTVGK Unmodified 904.50519 0.50518852 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 11 0.816 1 1 1 59.266 59.266 2;3 5.1114E-06 15141 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 156.51 24.423 305.92 201.21 350.32 161.42 275.26 49.036 288 214 343 158 269 46 3 3 3 2 2 1 31200 20946 1203 20163 48529;48530;48531 56241;56242;56243 56242 3 VIAVNEVGSSHPSLPSER Unmodified 1876.9643 0.96428978 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 5.5 0.5 1 1 53.38 53.38 3 1.3049E-07 17597 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.54 90.009 59.481 92.793 64.873 56.701 71.465 97.099 56 92 65 56 74 93 1 2 1 1 2 2 22513 20947 20;2354 20164 48532;48533 56244;56245 56244 2 VIAVNLK Unmodified 755.49052 0.49052473 1593 P50171;G3UX44 Hsd17b8;H2-Ke6 Estradiol 17-beta-dehydrogenase 8 yes no 0 0 0 0 10 0 1 61.405 61.405 2 0.016579 16637 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.69 44.694 0 50.947 71.142 58.896 71.84 83.23 0 49 71 59 74 80 0 1 1 1 1 1 8898 20948 1593 20165 48534 56246 56246 1 VICEVAHITLDR Unmodified 1424.7446 0.74458394 2224 Q6P6I8;E0CYM8;P97797 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 0 7 0 1 66.412 66.412 3 0.00086565 22271 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.11 35.69 20.042 37.578 26.208 38.879 0 0 19 37 28 37 0 0 1 1 1 1 0 0 5206.1 20949 2224 20166 48535 56247 56247 1 VICILSHPIK Unmodified 1178.6845 0.68454987 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 8 4.97 1 1 1 63.836 63.836 2;3 4.9646E-09 15494 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 155.07 98.152 251.74 122.25 147.27 255.81 29.288 118.33 236 125 149 241 28 111 3 2 2 2 1 1 194890 20950 2132 20167 48536;48537;48538 56248;56249;56250 56250 3 VICLVGAGISTSAGIPDFR Unmodified 1932.0139 0.01388251 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 11 0.707 1 2 1 86.026 86.026 2;3 5.4829E-08 27544 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.044 77.51 24.612 13.236 60.592 39.509 60.839 28.503 23 14 56 38 60 28 1 1 1 2 2 1 20733 20951 2702 20168 48539;48540;48541;48542 56251;56252;56253;56254 56251 4 VICVGLNYADHCQEQNVR Unmodified 2173.9997 0.99970578 165 A0A0R4J094;Q3TC72 Fahd2 Fumarylacetoacetate hydrolase domain-containing protein 2A yes no 0 0 0 0 7 0 1 56.962 56.962 3 2.5956E-15 17804 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.453 81.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20952 165 20169 48543 56255 56255 1 VIDDEEYEK Unmodified 1138.503 0.50299949 2187 Q68FL0;G5E8Y0;G3X9J1;P70414 Slc8a1 Sodium/calcium exchanger 1 yes no 0 0 0 0 3.33 0.471 2 1 52.793 52.793 2;3 0.0011561 17867 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.4 5.7434 117.99 138.08 174.92 148.93 127.91 85.359 111 140 176 148 130 83 2 3 3 3 2 1 46880 20953 2187 20170 48544;48545;48546 56256;56257;56258 56256 3 VIDFAVK Unmodified 790.45889 0.45889025 3155 Q9DCW4;A0A0U1RNP5;A0A0N4SVE0;A0A0U1RNR3;A0A0N4SWE9;A0A0U1RNK9 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 8 0 1 67.637 67.637 2 0.027409 22163 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.262 37.159 137.82 166.06 139.74 0 170.13 193.42 130 167 139 0 169 186 1 1 1 0 1 1 14254 20954 3155 20171 48547 56259 56259 1 VIDFDENTALDDTEEGSFR Unmodified 2171.9495 0.94948716 2442 Q8BP92 Rcn2 Reticulocalbin-2 yes yes 0 0 0 0 3 0.816 1 1 1 75.874 75.874 3 8.5866E-08 28059 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.554 85.215 9.408 100.45 0 132.5 79.398 68.59 9 95 0 122 80 66 1 5 0 3 5 3 16310 20955 2442 20172 48548;48549;48550 56260;56261;56262;56263;56264;56265;56266 56266 7 VIDHAIETEK Unmodified 1153.5979 0.59790293 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 5 0 1 47.61 47.61 3 0.0063993 14861 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.359 32.016 148.69 0 77.284 45.672 0 99.138 139 0 74 46 0 93 1 0 1 1 0 1 5088 20956 893 20173 48551 56267 56267 1 VIDIFDTDGNGEVDFK Deamidation (N) 1783.8152 0.81522551 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 1 0 0 6.57 2.77 1 2 2 1 1 89.183 89.183 3;4 6.8843E-05 35332 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.773 69.744 95.497 87.211 159.07 214.14 131.65 112.66 89 84 158 205 134 107 4 2 4 5 4 5 41691 20957 2164 20174 48552;48553;48554;48555;48556;48557;48558 56268;56269;56270;56271;56272;56273;56274;56275 56275 849 8 VIDIFDTDGNGEVDFK Unmodified 1782.8312 0.83120992 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 0 6.5 0.5 1 1 86.652 86.652 3 4.8461E-19 32465 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.344 80.269 49.074 56.275 48.538 27.711 66.005 78.067 46 56 46 28 65 75 1 1 1 1 1 2 15783 20958 2164 20174 48559;48560 56276;56277;56278 56276 3 VIDIFDTDGNGEVDFKEFIEGVSQFSVK Unmodified 3133.5132 0.51317683 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 0 0 1 11.3 1.25 2 2 2 108.28 108.28 4;5 1.0989E-25 35354 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.04 88.514 16.095 14.199 26.947 42.803 6 46 15 14 26 41 6 46 1 2 2 3 1 1 24601 20959 2164 20175 48561;48562;48563;48564;48565;48566 56279;56280;56281;56282;56283;56284;56285;56286;56287 56282 9 VIDIFDTDGNGEVDFKEFIEGVSQFSVK Deamidation (N) 3134.4972 0.49719242 2164 Q63810 Ppp3r1 Calcineurin subunit B type 1 yes yes 0 1 0 1 13 0 1 112.46 112.46 4 2.4563E-21 44600 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.942 61.324 0 0 0 12.812 16.147 0 0 0 0 12 16 0 0 0 0 1 1 0 1629.8 20960 2164 20175 48567 56288 56288 849 1 VIDKDGIHNLENIAFPK Unmodified 1922.0262 0.026161756 3312 Q9R1P3 Psmb2 Proteasome subunit beta type-2 yes yes 0 0 0 1 9.25 2.28 1 1 1 1 71.365 71.365 4 1.9253E-08 24858 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.22 91.173 257.51 362.97 162.13 395.88 462.52 104.55 242 360 167 379 463 102 3 4 2 4 4 1 46724 20961 3312 20176 48568;48569;48570;48571 56289;56290;56291;56292 56289 4 VIDPATATSVDLR Unmodified 1356.7249 0.72489436 1824 P80315;G5E839 Cct4 T-complex protein 1 subunit delta yes no 0 0 0 0 8 3.56 1 1 1 62.941 62.941 2 4.4956E-15 22118 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 137.89 83.182 49.189 0 28.353 38.056 74.668 28.772 46 0 28 37 74 28 1 0 1 1 2 1 14273 20962 1824 20177 48572;48573;48574 56293;56294;56295 56293 3 VIDTQQK Unmodified 830.44978 0.44978213 2927 Q9CQF7;Q9CWM4 Pfdn1 Prefoldin subunit 1 yes no 0 0 0 0 7 0 1 42.699 42.699 2 0.02833 11068 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.616 22.78 39.701 0 0 39.392 55.796 28.256 37 0 0 37 56 28 1 0 0 1 1 1 3517.9 20963 2927 20178 48575 56296 56296 1 VIEDLSGPYIWVPAR Unmodified 1713.909 0.90900673 407 A0A338P6E5;A0A338P6I6;Q62108 Dlg4 Disks large homolog 4 yes no 0 0 0 0 8.5 2.69 1 1 1 1 85.785 85.785 3 3.1772E-36 30764 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 170.95 144.84 80.038 46.053 78.189 19.33 76.884 19.732 75 47 75 18 75 19 3 2 2 1 3 1 25839 20964 407 20179 48576;48577;48578;48579 56297;56298;56299;56300;56301 56300 5 VIEEVSDMFAFIAR Unmodified 1625.8123 0.81232916 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 7.5 0.5 1 1 105.26 105.26 3 1.2824E-07 36511 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.069 55.957 0 3.1424 2.968 2.0091 0 0 0 3 3 2 0 0 0 1 1 1 0 0 648.84 20965 3259 20180 48580;48581 56302;56303 56303 2 VIEGQTDPDYQLLGQR Unmodified 1830.9112 0.91119158 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 4 0 1 64.62 64.62 3 0.00039794 22937 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.209 42.409 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 3187.6 20966 893 20181 48582 56304 56304 1 VIEGSFVYK Unmodified 1040.5542 0.5542472 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 9.25 2.28 1 1 1 1 64.922 64.922 2;3 3.3613E-05 23350 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.1 89.594 250.38 197.32 322.32 131.85 352.02 355.59 241 195 315 130 354 343 3 2 3 1 3 3 50928 20967 2132 20182 48583;48584;48585;48586 56305;56306;56307;56308 56308 4 VIELENWTEGK Unmodified 1316.6612 0.66123147 3100 Q9D9V3;E0CXS3 Echdc1 Ethylmalonyl-CoA decarboxylase yes no 0 0 0 0 6 0 1 74.446 74.446 3 0.0039821 26889 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.019 33.033 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20968 3100 20183 48587 56309 56309 1 VIEPGCVR Unmodified 928.48004 0.4800364 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 0 0 0 5.5 0.5 1 1 44.452 44.452 2 0.011497 12739 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.195 46.532 117.69 102.87 150 75.762 80.708 145.87 111 102 148 74 83 139 2 1 2 1 1 2 17878 20969 3279 20184 48588;48589 56310;56311 56311 2 VIEQLGGK Unmodified 842.48617 0.48616764 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 9.33 2.62 1 1 1 55.326 55.326 2 0.0030877 17114 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 124.98 37.661 536.8 250.79 639.19 287.59 141.49 757.09 505 268 619 290 148 714 3 2 3 2 1 3 63430 20970 65 20185 48590;48591;48592 56312;56313;56314 56312 3 VIESTQDLGNDLAGVMALQR Unmodified 2129.0787 0.078667612 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7.2 2.99 2 1 1 1 85.639 85.639 3;4 3.8073E-11 33502 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.23 79.385 28.477 0 39.986 66.767 19.874 40.508 28 0 37 65 19 38 2 0 2 2 1 2 27609 20971 2148 20186 48593;48594;48595;48596;48597 56315;56316;56317;56318;56319 56319 5 VIESTQGLGNDLAGVLALQR Unmodified 2053.1168 0.11676768 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8.4 2.42 1 1 2 1 85.201 85.201 2;3 1.2927E-10 30589 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.283 69.687 39.701 29.792 0 99.729 63.861 20.254 37 28 0 92 65 19 2 2 0 2 2 1 30410 20972 2186 20187 48598;48599;48600;48601;48602 56320;56321;56322;56323;56324 56322 5 VIFFLPWEK Unmodified 1177.6536 0.65356732 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 7.57 5.7 3 2 2 96.822 96.822 2;3 2.9909E-05 33842 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 143.01 87.461 337.5 251.66 378.86 349.55 240.32 374.92 317 262 374 339 253 358 8 9 8 8 7 9 100860 20973 2179 20188 48603;48604;48605;48606;48607;48608;48609 56325;56326;56327;56328;56329;56330;56331;56332;56333;56334;56335;56336;56337;56338 56329 14 VIFGNIEDIYR Unmodified 1337.698 0.69795133 89 A0A0G2JEU6;S4R1K5;B1AXI2;A0A0G2JE35;A0A0G2JEH1;B1AXI4;B1AXI6;Q3UTH8;A0A0G2JEU0 Arhgef9 Rho guanine nucleotide exchange factor 9 yes no 0 0 0 0 8 0 1 78.695 78.695 2 0.00042377 27445 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 63.32 0 0 38.334 98.511 45.344 0 0 0 37 93 46 0 0 0 1 2 1 0 4030.4 20974 89 20189 48610 56339;56340 56340 2 VIFITEYVSSGSLK Unmodified 1541.8341 0.83411046 2728 Q91V36;A0A2I3BQC5 Nrbp2 Nuclear receptor-binding protein 2 yes no 0 0 0 0 11 0 1 85.611 85.611 3 0.0010455 26989 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.178 36.758 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3673.7 20975 2728 20190 48611 56341 56341 1 VIFLENYR Unmodified 1052.5655 0.56548059 2555;3331;1969 Q8CI94;Q9WUB3;E9PUM3;Q3UEJ6;Q9ET01 Pygb;Pygm;Pygl Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form no no 0 0 0 0 10.2 1.72 1 1 1 1 1 68.861 68.861 2 4.3186E-16 19987 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 181.49 125.37 506.15 429.53 787.72 724.18 567.09 272.33 477 424 778 713 568 259 2 2 3 3 3 2 205950 20976 2555;3331;1969 20191 48612;48613;48614;48615;48616 56342;56343;56344;56345;56346;56347 56345 6 VIFPGTGYLCLVWK Unmodified 1651.8796 0.87962086 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 7 6 1 1 98.019 98.019 3 0.0043637 33852 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.12 31.204 6.3546 5.8035 9.0945 36.513 5.6806 58.468 6 6 9 34 6 55 1 1 1 2 1 2 2931 20977 1412 20192 48617;48618 56348;56349 56348 2 VIFPYEAQNDDELTIK Unmodified 1893.936 0.93600934 2668 Q8R550;E9Q0C1 Sh3kbp1 SH3 domain-containing kinase-binding protein 1 yes no 0 0 0 0 6 0 1 79.446 79.446 3 0.00017658 29209 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 59.607 38.957 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20978 2668 20193 48619 56350 56350 1 VIFVQGGGSGQFSAVPLNLIGLK Unmodified 2300.2893 0.28925273 2840 Q99K85;Q3U6K9;E9Q6P1 Psat1 Phosphoserine aminotransferase yes no 0 0 0 0 8.71 4.92 2 2 2 1 96.776 96.776 3;4 1.6533E-16 27570 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.95 85.356 64.292 42.878 20.558 30.604 49.395 45.676 60 43 19 28 48 45 3 4 1 1 4 4 33117 20979 2840 20194 48620;48621;48622;48623;48624;48625;48626 56351;56352;56353;56354;56355;56356;56357;56358;56359 56356 9 VIGDGNFAVVK Unmodified 1117.6132 0.61315906 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6;A0A0A6YX33 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 0 8 0 1 66.394 66.394 3 0.00064738 21592 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.2 38.976 0 39.368 0 0 36.028 77.856 0 37 0 0 37 74 0 1 0 0 1 1 2391.4 20980 67 20195 48627 56360 56360 1 VIGGDDLSTLTGK Unmodified 1274.6718 0.67179615 1295 P00493 Hprt1 Hypoxanthine-guanine phosphoribosyltransferase yes yes 0 0 0 0 8.67 3.09 1 1 1 70.497 70.497 2;3 3.4257E-33 24227 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 186.24 137.45 164.31 101.95 69.591 185.48 145.45 28.086 154 105 71 176 145 28 3 2 2 3 2 1 25619 20981 1295 20196 48628;48629;48630 56361;56362;56363 56362 3 VIGIDHIK Unmodified 893.53345 0.53345218 808 F7D432;E9PWE0;E0CYV0;P23506;F6V9F1 Pcmt1 Protein-L-isoaspartate O-methyltransferase;Protein-L-isoaspartate(D-aspartate) O-methyltransferase yes no 0 0 0 0 9.25 2.28 1 1 1 1 53.419 53.419 3 0.00022937 15496 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.81 66.024 527.68 592.61 547.3 265.94 607.75 824.8 497 599 538 251 613 790 3 4 3 2 3 4 100180 20982 808 20197 48631;48632;48633;48634 56364;56365;56366;56367 56365 4 VIGLGVPHSK Unmodified 1005.5971 0.59711507 2940 Q9CQS4 Slc25a46 Solute carrier family 25 member 46 yes yes 0 0 0 0 11 0 1 51.577 51.577 3 0.0022958 12290 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.04 49.833 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5806.9 20983 2940 20198 48635 56368 56368 1 VIGLSSDLQQVGGASAR Unmodified 1656.8795 0.87949752 3143 Q9DCH4 Eif3f Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 0 8 0 1 65.243 65.243 3 8.9163E-05 21021 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.52 49.254 39.307 45.836 27.348 0 27.631 48.248 37 46 28 0 28 46 1 1 1 0 1 1 4491.5 20984 3143 20199 48636 56369 56369 1 VIGNGSFGVVYQAK Deamidation (N) 1438.7456 0.7456298 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 1 0 0 9 0 1 72.011 72.011 3 0.022447 23619 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.434 25.595 39.406 0 49.573 0 0 29.848 37 0 46 0 0 28 1 0 1 0 0 1 4168.6 20985 947 20200 48637 56370 56370 254 1 VIGPGYPIR Unmodified 970.56 0.56000128 2014 Q61885;Q3UY21;Q29ZQ5 Mog Myelin-oligodendrocyte glycoprotein yes no 0 0 0 0 9.25 1.09 1 2 1 56.256 56.256 2 7.6557E-36 16150 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 166.13 101.32 290.31 200.41 270.46 183.9 0 359.24 273 211 270 183 0 337 1 1 1 1 0 1 45378 20986 2014 20201 48638;48639;48640;48641 56371;56372;56373;56374 56373 4 VIGSELVQK Unmodified 971.56515 0.56514624 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 7 0 1 60.015 60.015 2 0.018635 19318 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.27 19.188 68.739 62.586 116 0 82.835 115.96 65 65 111 0 83 111 1 1 1 0 1 1 3761.3 20987 1555 20202 48642 56375 56375 1 VIGSGCNLDSAR Unmodified 1247.5928 0.59283433 1315;1389;1293 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;D3YVR7;D3YZE4;P16125;D3Z7F0;A0A0N4SVV8;P00342 Ldha;Ldhc;Ldhb L-lactate dehydrogenase;L-lactate dehydrogenase A chain;L-lactate dehydrogenase B chain;L-lactate dehydrogenase C chain no no 0 0 0 0 8.8 3.49 1 1 1 2 46.002 46.002 2;3 4.6878E-103 13560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 238.86 112.62 486.9 1421.6 1630.4 1337 2363.6 2046 460 1389 1643 1344 2383 1981 3 4 5 4 5 4 261480 20988 1315;1389;1293 20203 48643;48644;48645;48646;48647 56376;56377;56378;56379;56380;56381;56382 56378 7 VIGSGCNLDSAR Deamidation (N) 1248.5768 0.57684991 1315;1389;1293 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9;D3YZQ9;A0A1B0GT41;A0A1B0GQX5;D3YVR7;D3YZE4;P16125;D3Z7F0;A0A0N4SVV8;P00342 Ldha;Ldhc;Ldhb L-lactate dehydrogenase;L-lactate dehydrogenase A chain;L-lactate dehydrogenase B chain;L-lactate dehydrogenase C chain no no 0 1 0 0 6 1 1 1 48.57 48.57 2 0.0018274 12816 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.428 59.615 255.7 390.73 36.161 345.18 768.07 595.3 240 384 37 331 769 579 1 2 1 2 2 2 39685 20989 1315;1389;1293 20203 48648;48649 56383;56384 56384 352 2 VIGTLLGTVDK Unmodified 1114.6598 0.65977491 3143 Q9DCH4 Eif3f Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 0 10 0 1 79.105 79.105 3 0.00044932 24529 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.017 52.848 20.244 28.427 0 0 0 59.696 19 28 0 0 0 56 1 1 0 0 0 1 7218 20990 3143 20204 48650 56385 56385 1 VIGYGLPFPK Unmodified 1089.6223 0.62226719 3087 Q9D832 Dnajb4 DnaJ homolog subfamily B member 4 yes yes 0 0 0 0 11 0 1 77.544 77.544 2 0.0040783 23300 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.116 45.995 0 58.811 46.243 0 58.576 0 0 56 46 0 56 0 0 1 1 0 1 0 20876 20991 3087 20205 48651 56386 56386 1 VIHAGLK Unmodified 736.45956 0.45955895 1936 Q3TQG9 Zfp607 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 41.916 41.916 3 0.0061245 9816 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.306 48.75 156.87 242.16 310.03 258.14 180.81 182.46 148 241 299 250 185 176 1 2 2 2 2 2 38239 20992 1936 20206 48652;48653;48654;48655 56387;56388;56389;56390 56387 4 VIHDNFGIVEGLMTMAHAITATQK Oxidation (M) 2612.3091 0.30907825 3454 V9GX06 Gm11214 yes yes 0 0 1 0 11 0 1 89.241 89.241 5 2.3251E-05 28548 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.503 38.328 30.044 0 0 20.767 0 39.442 28 0 0 19 0 37 1 0 0 1 0 1 1834.6 20993 3454 20207 48656 56391 56391 205;206 1 VIHDNFGIVEGLMTTVHAITATQK Unmodified 2594.3527 0.35265763 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 8.5 4.82 4 2 3 3 2 93.052 93.052 3;4;5 3.4481E-67 29257 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 162.11 143.07 1202.8 554.2 1144.3 1542.3 523.43 1083.5 1128 560 1103 1500 528 1025 13 10 13 12 9 11 651890 20994 1395;3448 20208 48657;48658;48659;48660;48661;48662;48663;48664;48665;48666;48667;48668;48669;48670 56392;56393;56394;56395;56396;56397;56398;56399;56400;56401;56402;56403;56404;56405;56406;56407;56408;56409;56410;56411;56412;56413;56414;56415;56416 56402 25 VIHDNFGIVEGLMTTVHAITATQK Oxidation (M) 2610.3476 0.34757225 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 0 10.9 0.99 1 1 3 2 83.818 83.818 4;5 1.0759E-18 25272 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.26 92.661 274.08 295.32 186.03 359.03 109.3 210.08 257 291 186 346 111 200 4 6 4 7 3 4 93020 20995 1395;3448 20208 48671;48672;48673;48674;48675;48676;48677 56417;56418;56419;56420;56421;56422;56423;56424;56425;56426 56421 87 10 VIHDNFGIVEGLMTTVHAITATQK Deamidation (N) 2595.3367 0.33667321 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 9.33 0.471 2 1 94.838 94.838 4;5 0.00014127 30989 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.076 40.988 0 0 20.558 60.675 57.647 29.848 0 0 19 56 56 28 0 0 1 2 2 1 10575 20996 1395;3448 20208 48678;48679;48680 56427;56428;56429 56429 471 3 VIHECQQR Unmodified 1068.5135 0.51346179 3064 Q9D4H8;E0CYT5 Cul2 Cullin-2 yes no 0 0 0 0 6 0 1 25.284 25.284 3 0.041225 4135 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.972 32.518 20.387 0 0 0 38.702 0 19 0 0 0 37 0 1 0 0 0 1 0 987.8 20997 3064 20209 48681 56430 56430 1 VIHIQAENGPR Deamidation (N) 1233.6466 0.64658446 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 1 0 0 6.8 3.12 3 1 1 43.431 43.431 3 2.2825E-05 12288 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.38 84.467 539.71 445 575.58 168.13 432.12 713.62 508 456 556 157 432 681 4 3 3 3 2 4 63969 20998 3258 20210 48682;48683;48684;48685;48686 56431;56432;56433;56434;56435 56434 1116 5 VIHLVER Unmodified 864.51814 0.51813647 1970 Q3UF95;Q9Z1R2;G3UYQ2;A0A1B0GX81;G3UZT6;G3UXT8;G3UYZ0;G3V013;S4R183 Bag6 Large proline-rich protein BAG6 yes no 0 0 0 0 7 0 1 44.372 44.372 3 0.031422 11883 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.281 25.992 40.589 36.631 0 0 29.288 0 38 37 0 0 28 0 1 1 0 0 1 0 2172.4 20999 1970 20211 48687 56436 56436 1 VIHSILNSSYAK Unmodified 1330.7245 0.72450043 1830 Q8VCK3;P83887 Tubg2;Tubg1 Tubulin gamma-2 chain;Tubulin gamma-1 chain yes no 0 0 0 0 11 0 1 57.52 57.52 3 8.5974E-05 14607 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.522 50.864 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21000 1830 20212 48688 56437 56437 1 VIIECKPK Unmodified 985.56304 0.56303775 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 1 10.7 1.7 1 1 1 48.831 48.831 3 0.0045688 12652 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.57 58.37 1642.1 1065.9 1725.9 1363.9 0 412.54 1545 1133 1718 1342 0 387 3 3 3 3 0 1 120490 21001 1362 20213 48689;48690;48691 56438;56439;56440 56438 3 VIIEDEQLVLGASQEPVGR Unmodified 2051.0899 0.089884225 3361 Q9Z0P5;A0A1L1SU53 Twf2 Twinfilin-2 yes no 0 0 0 0 4.5 0.5 1 1 78.15 78.15 3 1.8316E-10 29174 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 112.82 95.074 0 9.576 20.558 0 57.958 48.448 0 9 19 0 57 47 0 1 1 0 2 2 9769.6 21002 3361 20214 48692;48693 56441;56442 56441 2 VIIEGGGALAALQAMK Unmodified 1540.8647 0.86469908 2437 Q8BNU0 Armc6 Armadillo repeat-containing protein 6 yes yes 0 0 0 0 9.5 0.5 1 1 84.881 84.881 3 3.5656E-05 27094 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.939 67.722 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 1674.8 21003 2437 20215 48694;48695 56443;56444 56444 2 VIILGDSGVGK Unmodified 1056.6179 0.61791009 1600 P51150;A0A0N4SVG9;A0A0N4SVR6 Rab7a Ras-related protein Rab-7a yes no 0 0 0 0 9.5 2.06 2 1 1 66.972 66.972 2;3 1.2598E-13 24369 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 153.05 81.703 138.16 76.343 304.96 128.14 379.9 310.03 130 83 292 130 379 301 2 2 4 2 4 4 48725 21004 1600 20216 48696;48697;48698;48699 56445;56446;56447;56448 56448 4 VIILSLDR Unmodified 927.57532 0.57531699 1022 F7CBP1;G3XA17;Q62448 Eif4g2 Eukaryotic translation initiation factor 4 gamma 2 yes no 0 0 0 0 10 0 1 71.06 71.06 2 0.010684 21033 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.492 56.223 49.074 56.275 0 60.012 63.612 47.221 46 56 0 56 65 46 1 1 0 1 1 1 4006 21005 1022 20217 48700 56449 56449 1 VIISAPSADAPMFVMGVNHEK Unmodified 2212.102 0.10204559 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 9 1.94 2 2 2 1 1 74.394 74.394 3;4;5 5.9792E-39 27970 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.88 126.06 414.68 343.98 507.28 256.21 411.71 368.2 389 351 491 241 408 352 5 6 6 3 5 4 450440 21006 1395;3448 20218 48701;48702;48703;48704;48705;48706;48707;48708 56450;56451;56452;56453;56454;56455;56456;56457 56457 8 VIISAPSADAPMFVMGVNHEK Oxidation (M) 2228.097 0.096960213 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 0 7.67 0.471 1 2 70.155 70.155 3;4 4.1715E-06 23888 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.857 46.626 54.211 98.821 43.749 89.886 113.7 139.6 51 97 46 88 116 134 1 2 1 2 2 2 8029.5 21007 1395;3448 20218 48709;48710;48711 56458;56459;56460;56461 56460 88;89 4 VIISAPSADAPMFVMGVNHEK Deamidation (N) 2213.0861 0.086061175 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 8 0 1 77.915 77.915 4 0.0078676 27119 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.381 23.502 0 0 70.33 0 0 39.442 0 0 65 0 0 37 0 0 1 0 0 1 3705.7 21008 1395;3448 20218 48712 56462 56462 472 1 VILALGDYMGATCHACIGGTNVR Unmodified 2448.1712 0.17120456 1345 P10630;Q8BTU6;A0A338P6X5;E9Q561 Eif4a2 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed yes no 0 0 0 0 12 0 1 75.323 75.323 3 1.3327E-06 19939 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.882 47.133 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2855.8 21009 1345 20219 48713 56463 56463 1 VILDCER Unmodified 903.4484 0.44840192 1104 G5E8H1 Gria2 no no 0 0 0 0 6 0 1 47.784 47.784 2 0.048917 14278 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.833 28.718 88.075 101.26 79.54 84.107 99.521 96.298 83 102 83 83 102 93 1 1 1 1 1 1 6674.4 21010 1104 20220 48714 56464 56464 1 VILESLLSQYSGK Unmodified 1435.7922 0.79224564 238 A0A140LJ04;E9Q5W5;Q5SSH7 Zzef1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 yes no 0 0 0 0 12 0 1 89.376 89.376 3 0.00039755 25419 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.997 44.621 24.612 13.236 0 30.278 17.329 33.618 23 14 0 28 19 32 1 1 0 1 1 1 2546.9 21011 238 20221 48715 56465 56465 1 VILHLKEDQTEYLEER Unmodified 2014.0371 0.037120373 1322;1354 P07901;B7ZC50;P11499 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 1 9 2.89 1 2 1 2 64.815 64.815 3;4 2.5699E-41 23718 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 163.23 151.91 345.18 328.54 397.79 342.17 267.11 261.76 325 335 398 334 269 250 7 7 6 6 5 4 84472 21012 1322;1354 20222 48716;48717;48718;48719;48720;48721 56466;56467;56468;56469;56470;56471;56472;56473 56467 8 VILHPTPNSPK Unmodified 1201.6819 0.68190733 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 10.5 0.5 1 1 44.874 44.874 3 0.00056033 9771 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.332 56.002 48.652 59.417 68.359 90.844 67.294 106.81 46 60 69 88 69 102 1 1 1 2 1 2 14379 21013 2301;365 20223 48722;48723 56474;56475 56474 2 VILLDVAR Unmodified 897.56475 0.56475231 63 E9QKE4;A0A0A6YWM5;Q8BMG7 Rab3gap2 Rab3 GTPase-activating protein non-catalytic subunit yes no 0 0 0 0 9 0 1 68.772 68.772 2 0.032377 22043 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.919 26.472 58.943 72.572 130.95 113.52 0 88.478 56 74 130 111 0 83 1 1 1 1 0 1 9079.5 21014 63 20224 48724 56476 56476 1 VILLGDGGVGK Unmodified 1026.6073 0.6073454 2404 Q8BHH2 Rab9b Ras-related protein Rab-9B yes yes 0 0 0 0 9 0 1 68.517 68.517 3 0.0070735 21912 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.762 28.386 48.999 0 60.345 0 0 49.036 46 0 56 0 0 46 1 0 1 0 0 1 3108.6 21015 2404 20225 48725 56477 56477 1 VILPPGK Unmodified 722.46906 0.46906101 2361 Q8BFR5;A0A0U1RPC4 Tufm Elongation factor Tu, mitochondrial yes no 0 0 0 0 10 0 1 56.605 56.605 2 0.027447 14593 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.669 38.643 426.27 319.91 402.36 325.65 413.62 190.85 401 334 405 327 416 185 2 2 2 2 2 1 29525 21016 2361 20226 48726 56478;56479 56479 2 VILPVSVDEYQVGQLYSVAEASK Unmodified 2493.3003 0.30027093 1148 J3QQ30;J3QPW1;P53810;F8WGG5 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 8.33 2.29 1 2 1 1 1 91.341 91.341 3;4 1.8627E-39 33833 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.66 91.583 70.43 65.74 181.33 141.57 83.007 29.848 66 65 177 139 83 28 3 2 4 3 1 1 37077 21017 1148 20227 48727;48728;48729;48730;48731;48732 56480;56481;56482;56483;56484;56485;56486 56482 7 VILQELR Unmodified 869.53345 0.53345218 3014;3050 Q9CZY3;B7ZBY7;E9PY39;Q9D2M8;A6X925;B2KF55 Ube2v1;Gm20431;Ube2v2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 0 9.25 2.28 1 1 1 1 60.553 60.553 2 0.0075111 21131 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 128.86 18.689 701.21 556.93 879.35 707.83 897.76 445.71 661 568 876 711 904 431 4 3 4 4 4 3 162720 21018 3014;3050 20228 48733;48734;48735;48736 56487;56488;56489;56490 56490 4 VILSSSSSCLLPSK Unmodified 1476.7858 0.78578005 2846 Q99KP3 Cryl1 Lambda-crystallin homolog yes yes 0 0 0 0 10.5 0.5 1 1 69.336 69.336 3 0.00052215 20178 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 65.805 34.577 48.883 98.952 79.822 101.65 95.321 205.15 46 93 74 93 93 195 1 1 1 1 1 2 20691 21019 2846 20229 48737;48738 56491;56492 56491 2 VIMITGDNK Unmodified 989.52157 0.52156686 1242 O55143;Q8R429 Atp2a2;Atp2a1 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 yes no 0 0 0 0 9 0 1 59.647 59.647 2 0.0044394 17720 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.679 46.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21020 1242 20230 48739 56493 56493 1 VIMVTGDHPITAK Unmodified 1380.7435 0.74352131 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp4a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 0 0 9.83 2.11 1 1 1 1 1 1 55.71 55.71 3;4 4.0832E-28 16621 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 176.97 134.91 1381.7 855.46 1610.3 1039.8 1160.5 664.77 1299 908 1581 1050 1177 639 4 5 6 5 5 4 314600 21021 106;2253;2699 20231 48740;48741;48742;48743;48744;48745 56494;56495;56496;56497;56498;56499;56500;56501 56495 8 VIMVTGDHPITAK Oxidation (M) 1396.7384 0.73843593 106;2253;2699 A0A0G2JGX4;Q6PIC6;Q8VCE0;Q9Z1W8;Q91WH7;E9QNX7;Q64436;Q6PIE5;D3YYN7;Q9WV27;Q8VDN2 Atp1a3;Atp12a;Atp4a;Atp1a2;Atp1a4;Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-3;Potassium-transporting ATPase alpha chain 2;Potassium-transporting ATPase alpha chain 1;Sodium/potassium-transporting ATPase subunit alpha-2;Sodium/potassium-transporting ATPase subunit alpha-4;Sodium/potassium-transporting ATPase subunit alpha-1 no no 0 0 1 0 8.5 0.5 2 2 52.74 52.74 3 0.0034931 14653 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.116 22.832 201.67 165.58 229.37 186.4 316.67 124.02 190 172 222 181 315 121 3 3 2 3 4 2 28626 21022 106;2253;2699 20231 48746;48747;48748;48749 56502;56503;56504;56505 56505 10 4 VINAAHSFYNGTTTLPISDEDR Unmodified 2420.1608 0.16081734 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 5 0 1 66.6 66.6 3 0.0060577 23764 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 36.246 27.537 0 0 9.738 0 0 20.254 0 0 9 0 0 19 0 0 1 0 0 1 1698.8 21023 1925 20232 48750 56506 56506 1 VINDFVEK Unmodified 962.5073 0.50729701 1871;1434;43 A0A0R4J0X5;A0A0A0MQA3;P07758;Q00896;Q00898;P22599;Q00897 Serpina1a;Serpina1c;Serpina1e;Serpina1b;Serpina1d Alpha-1-antitrypsin 1-1;Alpha-1-antitrypsin 1-3;Alpha-1-antitrypsin 1-5;Alpha-1-antitrypsin 1-2;Alpha-1-antitrypsin 1-4 no no 0 0 0 0 6 0 1 64.086 64.086 2 0.011128 21924 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.692 44.085 69.745 0 0 49.249 54.683 47.476 65 0 0 46 56 46 1 0 0 1 1 1 4260.3 21024 43;1434;1871 20233 48751 56507 56507 1 VINEPTAAALAYGLDK Unmodified 1644.8723 0.87228688 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 76.796 76.796 2;3 1.2018E-07 26472 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.18 84.948 207.52 155.93 26.868 215.66 303.59 219.46 194 157 28 204 306 214 3 3 1 4 3 3 29540 21025 1533 20234 48752;48753;48754;48755 56508;56509;56510;56511 56510 4 VINLGKPLK Unmodified 980.63825 0.6382516 1004 F6VSK8;Q61739 Itga6 Integrin alpha-6;Integrin alpha-6 heavy chain;Integrin alpha-6 light chain yes no 0 0 0 1 12 0 1 59.343 59.343 3 0.060957 13858 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 49.715 35.041 88.74 63.176 0 79.925 50.891 116.87 83 65 0 74 56 111 1 1 0 1 1 1 4945.6 21026 1004 20235 48756 56512 56512 1 VINQILTEMDGMSTK Unmodified 1678.827 0.82699294 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 8 1 1 1 90.253 90.253 3 0.00089588 31941 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.148 42.89 39.477 0 65.725 47.374 34.876 48.041 37 0 65 46 37 46 1 0 2 1 1 1 3686 21027 1875 20236 48757;48758 56513;56514 56514 2 VINSCHR Unmodified 884.42867 0.42866953 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 8.67 1.7 1 1 1 23.854 23.854 3 0.0044029 3579 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 104.21 65.246 0 7.2084 14.331 14.624 28.057 12.248 0 7 14 15 28 12 0 1 1 2 2 1 8224.8 21028 1825 20237 48759;48760;48761 56515;56516;56517 56517 3 VINSVDIK Unmodified 886.51238 0.51238239 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 57.685 57.685 2;3 0.0047382 18203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.52 46.523 654.97 437.81 998.7 793.2 629.36 1180.2 616 463 983 791 646 1124 3 3 4 4 3 4 83100 21029 1263 20238 48762;48763;48764;48765 56518;56519;56520;56521 56519 4 VINVNLIGTFNVIR Unmodified 1570.9195 0.91951184 2879 Q99N15;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 12 0 1 87.59 87.59 2 0.00061292 24735 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 88.187 61.088 0 0 0 9.4714 19.439 0 0 0 0 9 19 0 0 0 0 1 1 0 1309.3 21030 2879 20239 48766 56522 56522 1 VINYEEFKK Unmodified 1168.6128 0.61282471 2963 Q9CRB6 Tppp3 Tubulin polymerization-promoting protein family member 3 yes yes 0 0 0 1 7.5 0.5 1 1 59.341 59.341 3 0.009934 18247 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.5 40.647 316.76 199.69 333.78 144.86 579.21 332.05 298 213 327 152 571 327 2 2 2 1 2 2 25420 21031 2963 20240 48767;48768 56523;56524 56524 2 VIPAADLSEQISTAGTEASGTGNMK Unmodified 2447.185 0.18498318 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 13 0 1 71.47 71.47 3 2.7674E-05 26733 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 49.99 22.1 39.474 0 38.156 37.68 25.898 48.297 37 0 37 37 28 46 1 0 1 1 1 1 2953.4 21032 3331 20241 48769 56525 56525 1 VIPAADLSQQISTAGTEASGTGNMK Unmodified 2446.201 0.20096759 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 7 0 2 71.877 71.877 3;4 5.9521E-20 24777 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.41 64.104 20.387 106.63 113.7 0 91.254 195.67 19 102 111 0 93 186 1 1 1 0 1 2 10012 21033 2555 20242 48770;48771 56526;56527 56526 2 VIPAVSISYVVYENLK Deamidation (N) 1793.9815 0.98150297 517 A2ASZ8 Slc25a25 Calcium-binding mitochondrial carrier protein SCaMC-2 yes yes 0 1 0 0 10 0 1 94.946 94.946 3 9.656E-05 31021 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.533 54.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21034 517 20243 48772 56528 56528 139 1 VIPDCSLTLEDFVR Unmodified 1662.8287 0.8287075 2303 Q80TL4;F6SBE4 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 8.33 3.4 1 1 1 84.357 84.357 2;3 0.00015696 30742 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.692 57.32 28 38.575 97.23 0 0 39.442 28 37 92 0 0 37 1 1 2 0 0 1 9551.6 21035 2303 20244 48773;48774;48775 56529;56530;56531 56530 3 VIPEFDTPGHTQSWGK Unmodified 1797.8686 0.86859848 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 6 0 1 64.801 64.801 3 0.011327 22268 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.547 27.41 0 59.584 0 0 95.688 46.306 0 56 0 0 93 46 0 1 0 0 1 1 5205.3 21036 1420 20245 48776 56532 56532 1 VIPELNGK Deamidation (N) 869.48583 0.48583328 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 1 0 0 7.29 2.49 1 3 1 1 1 63.221 63.221 2;3 3.5267E-05 20871 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.77 76.908 8070.8 6720.5 9244.2 7411.6 9494.1 9134.4 7601 6973 9257 7422 9702 8821 7 8 8 8 9 8 1632000 21037 1395;3448 20246 48777;48778;48779;48780;48781;48782;48783 56533;56534;56535;56536;56537;56538;56539;56540;56541 56538 473 9 VIPELNGK Unmodified 868.50182 0.5018177 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 7.25 0.829 1 1 2 60.397 60.397 2;3 0.0017455 19420 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.64 53.082 446.41 347.15 600.62 475.29 652.61 615.65 421 364 596 465 665 595 4 4 4 2 4 4 114330 21038 1395;3448 20246 48784;48785;48786;48787 56542;56543;56544;56545 56543 4 VIPENGPAAQDPHK Unmodified 1471.7419 0.74194141 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 7 3.54 1 1 1 1 44.968 44.968 3 3.4224E-05 13358 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.285 55.05 119.1 72.134 212.79 67.631 102.34 77.019 112 74 204 65 102 74 2 2 3 1 2 1 16145 21039 2074 20247 48788;48789;48790;48791 56546;56547;56548;56549 56547 4 VIPLGGDCTVYPVFVNEAAYYEK Unmodified 2603.2618 0.26177693 2660 Q8R3P0 Aspa Aspartoacylase yes yes 0 0 0 0 7 0 1 90.387 90.387 3 9.7915E-07 33441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.093 42.613 0 0 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 1076.2 21040 2660 20248 48792 56550 56550 1 VIPSQEHLDGPLPEPFSNGEIQK Deamidation (N) 2531.2544 0.25438337 1815 P70441 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 yes yes 0 1 0 0 6 0 1 72.401 72.401 4 0.0004145 25927 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.784 30.53 39.454 26.818 18.75 0 46.807 38.106 37 28 19 0 46 37 1 1 1 0 1 1 2416 21041 1815 20249 48793 56551 56551 737 1 VIPTKGPK Unmodified 838.52764 0.52763852 2035 Q52KR3 Prune2 Protein prune homolog 2 yes yes 0 0 0 1 11 0 1 46.51 46.51 3 0.018303 10157 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.547 10.001 0 304 0 0 0 0 0 304 0 0 0 0 0 1 0 0 0 0 26997 21042 2035 20250 48794 56552 56552 1 VIPTPGK Unmodified 710.43268 0.4326755 1333 P09405 Ncl Nucleolin yes yes 0 0 0 0 9 1 1 1 51.41 51.41 2 0.049285 12229 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.415 26.242 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21043 1333 20251 48795;48796 56553;56554 56554 2 VIQAPEAK Unmodified 854.48617 0.48616764 2422 Q8BKC5 Ipo5 Importin-5 yes yes 0 0 0 0 13 0 1 47.841 47.841 2 0.034465 15289 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.954 32.578 59.403 73.853 52.482 75.868 100.27 85.617 56 74 56 74 102 83 1 1 1 1 1 1 3400.7 21044 2422 20252 48797 56555 56555 1 VIQATGGGAYK Unmodified 1063.5662 0.56620887 2342 Q80YV4 Pank4 Pantothenate kinase 4 yes yes 0 0 0 0 8 0 1 49.184 49.184 3 0.06279 13518 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 35.496 9.3768 0 58.015 93.843 74.118 62.267 67.513 0 56 93 74 65 65 0 1 1 1 1 1 2542 21045 2342 20253 48798 56556 56556 1 VIQCFAETGQVQK Unmodified 1506.7501 0.75006325 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8.5 2.14 3 1 1 1 62.466 62.466 2;3;4 1.0273E-15 19587 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.99 94.904 442.78 420.81 292.6 328.65 317.86 437.66 416 423 296 315 315 417 6 5 4 4 4 5 208420 21046 2185 20254 48799;48800;48801;48802;48803;48804 56557;56558;56559;56560;56561;56562;56563 56560 7 VIQCTVPPGVDSFYLEIFDER Unmodified 2483.2043 0.20426206 2503 Q8C5G6;Q9QZ06;F7AT44;A9JEI5 Tollip Toll-interacting protein yes no 0 0 0 0 9.5 3.5 1 1 95.872 95.872 3 0.00010103 36230 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.029 38.726 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2493.4 21047 2503 20255 48805;48806 56564;56565 56564 2 VIQEIWPVLSETLNK Unmodified 1767.9771 0.9770863 2214 Q6P2B1 Tnpo3 Transportin-3 yes yes 0 0 0 0 9.33 0.471 2 1 98.759 98.759 3 9.6833E-05 35399 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.594 50.016 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 1965.7 21048 2214 20256 48807;48808;48809 56566;56567;56568 56566 3 VIQHNALEDR Unmodified 1193.6153 0.61528433 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 5 0 1 37.575 37.575 3 0.0021797 9791 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 64.906 43.442 69.069 42.997 77.14 0 0 78.884 65 46 74 0 0 74 1 1 1 0 0 1 24485 21049 1653 20257 48810 56569 56569 1 VIQIIPYDFNR Unmodified 1376.7452 0.74523587 250 A0A1B0GRT6;A0A1B0GRH2;P49446 Ptpre Receptor-type tyrosine-protein phosphatase epsilon yes no 0 0 0 0 9 0 1 78.68 78.68 2 0.0033211 26696 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.006 20.279 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 2642.5 21050 250 20258 48811 56570 56570 1 VIQIVINR Unmodified 953.6022 0.60220045 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 10 0 1 63.612 63.612 2 0.020116 17664 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.178 46.889 0 38.068 77.784 0 56.581 58.081 0 37 74 0 56 56 0 1 1 0 1 1 23826 21051 1401 20259 48812 56571 56571 1 VIQNCFLSNR Unmodified 1249.6237 0.62374052 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 9 0 1 57.878 57.878 2 0.013249 16900 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.78 43 0 48.16 46.882 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 3379.5 21052 240 20260 48813 56572 56572 1 VIQNLANFSK Unmodified 1132.6241 0.6240581 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8 Syngap1 Ras/Rap GTPase-activating protein SynGAP no no 0 0 0 0 10.5 0.5 1 1 68.047 68.047 2 3.9024E-05 19623 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.68 76.614 88.87 129.55 102.25 125.49 35.749 0 84 129 102 121 37 0 2 2 1 2 1 0 31505 21053 992 20261 48814;48815 56573;56574 56573 2 VIQQSLEQEEAEHK Unmodified 1666.8162 0.81622856 347 F8VPK5;A0A1Y7VMN0;P70336 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 4 0 1 51.094 51.094 3 1.0276E-21 16830 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 137.21 106.9 49.063 0 49.525 0 0 39.442 46 0 46 0 0 37 1 0 1 0 0 1 6913.6 21054 347 20262 48816 56575 56575 1 VIQSVANYAK Unmodified 1091.5975 0.597509 171 A0A0R4J0F6;Q99KY4 Gak Cyclin-G-associated kinase yes no 0 0 0 0 9 0 1 59.716 59.716 2 1.6729E-08 17781 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 147.95 84.382 0 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 3525.9 21055 171 20263 48817 56576 56576 1 VIQSVSSYTK Unmodified 1110.5921 0.59208927 2306 Q80TZ3;B1B0B8;B1B0B7 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes no 0 0 0 0 9 0.816 1 1 1 56.323 56.323 2 1.7415E-07 14328 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.1 81.295 0 69.16 0 69.867 62.645 62.172 0 65 0 65 65 60 0 2 0 2 2 2 13786 21056 2306 20264 48818;48819;48820 56577;56578;56579 56579 3 VIQSVVYCHGGR Unmodified 1373.6874 0.68740341 2753 Q91WC3 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes yes 0 0 0 0 9 0 1 46.039 46.039 3 0.0013935 11321 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.121 36.972 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21057 2753 20265 48821 56580 56580 1 VIQVPSKK Unmodified 897.56475 0.56475231 1402 P17563;Q63836;G3UYY2;A0A0R4J135 Selenbp1;Selenbp2 Selenium-binding protein 1;Selenium-binding protein 2 yes no 0 0 0 1 10 0 1 49.318 49.318 3 0.027203 11458 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.262 27.375 78.356 81.24 107.01 78.361 85.494 86.038 74 83 107 79 88 83 1 1 1 1 1 1 6555.9 21058 1402 20266 48822 56581 56581 1 VIQYLAHVASSHK Unmodified 1451.7885 0.78849767 1974;2696 Q8VDD5;Q3UH59;Q61879;Q5SV64;Q8BXF2 Myh9;Myh10 Myosin-9;Myosin-10 no no 0 0 0 0 1 0 1 64.087 64.087 4 0.0022224 21458 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 52.576 30.043 39.283 26.341 47.994 0 0 0 37 28 46 0 0 0 1 1 1 0 0 0 2771 21059 2696;1974 20267 48823 56582 56582 1 VIRPLDQPSSFDATPYIK Unmodified 2046.0786 0.078591257 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 1 10 2.16 1 1 1 68.537 68.537 3;4 1.1905E-06 21969 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.005 54.49 206.95 111.54 169.55 316.39 365.38 237.39 194 111 167 305 371 231 2 2 2 3 3 2 27970 21060 2264 20268 48824;48825;48826 56583;56584;56585 56584 3 VISELNGKNIEDVIAQGVGK Deamidation (N) 2083.1161 0.11609898 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 1 0 1 8 0 1 83.021 83.021 4 0.0018128 29466 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.752 31.446 39.516 36.703 0 0 26.935 68.521 37 37 0 0 28 65 1 1 0 0 1 1 2550.7 21061 1865 20269 48827 56586 56586 754;755 1 VISEYQK Unmodified 865.45453 0.45453316 2825 Q99J77 Nans yes yes 0 0 0 0 7 0 1 48.75 48.75 2 0.026481 13916 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.375 41.816 0 0 49.772 0 45.781 67.984 0 0 46 0 46 65 0 0 1 0 1 1 3148.3 21062 2825 20270 48828 56587 56587 1 VISFEEQVASIR Unmodified 1376.73 0.72997974 1270 O88544;F6QTS1;D3Z1R9;D3YV99 Cops4 COP9 signalosome complex subunit 4 yes no 0 0 0 0 7 0 1 71.844 71.844 3 0.016539 24760 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 46.88 21.221 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21063 1270 20271 48829 56588 56588 1 VISGVLQLGNIAFK Unmodified 1457.8606 0.86059998 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 6.5 5.5 1 1 90.652 90.652 3 3.7608E-05 32278 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.96 61.382 39.4 14.896 50.655 22.953 29.288 0 37 14 47 21 28 0 2 1 2 1 1 0 15922 21064 2696 20272 48830;48831 56589;56590;56591 56589 3 VISLSGEHSIIGR Unmodified 1366.7569 0.75686319 1326 P08228 Sod1 Superoxide dismutase [Cu-Zn] yes yes 0 0 0 0 8.5 3.59 1 1 1 1 1 1 56.922 56.922 2;3 3.1914E-41 18276 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 195.09 175.82 508.73 391.4 508.53 493.46 646.08 343.23 478 399 491 469 639 333 4 4 5 4 6 4 277240 21065 1326 20273 48832;48833;48834;48835;48836;48837 56592;56593;56594;56595;56596;56597;56598 56592 7 VISPSEDR Unmodified 901.45051 0.45051041 2030;1425 P20444;Q4VA93 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 0 5 0 1 37.669 37.669 2 0.0022859 10047 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.86 65.555 98.529 69.538 152.78 60.359 84.045 0 93 74 148 65 83 0 1 1 1 1 1 0 10453 21066 1425;2030 20274 48838 56599 56599 1 VISSANR Unmodified 745.40825 0.40825167 1757 P62918 Rpl8 60S ribosomal protein L8 yes yes 0 0 0 0 8 0 1 30.881 30.881 2 0.029762 5367 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.472 34.685 48.978 45.213 25.603 38.915 0 0 46 46 28 37 0 0 1 1 1 1 0 0 2483.1 21067 1757 20275 48839 56600 56600 1 VISSILAFR Unmodified 1004.6019 0.6018661 157 A0A1L1SRW7;A0A1L1SS90;A0A0R4J050;A0A1L1SRL5;Q99JW2 Acy1 Aminoacylase-1 yes no 0 0 0 0 12 0 1 78.46 78.46 2 0.0022371 21179 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.909 55.641 54.495 45.269 0 55.743 0 0 51 46 0 51 0 0 1 1 0 1 0 0 9161.3 21068 157 20276 48840 56601 56601 1 VISTLSVGVDHLALDEIK Unmodified 1908.0568 0.056793183 2781 Q91Z53;D6REG4;B1AXQ0 Grhpr Glyoxylate reductase/hydroxypyruvate reductase yes no 0 0 0 0 7 0 1 81.704 81.704 3 0.027999 29467 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.121 21.487 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21069 2781 20277 48841 56602 56602 1 VISTPPTPIFPISDDIGAIPIK Unmodified 2290.2824 0.28243602 644 B9EKR1;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 8 0 1 94.527 94.527 4 0.063287 34205 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 24.875 10.414 0 9.576 0 0 0 14.924 0 9 0 0 0 14 0 1 0 0 0 1 752.48 21070 644 20278 48842 56603 56603 1 VISYEEGK Unmodified 923.46001 0.46001246 2798 Q921J2 Rheb GTP-binding protein Rheb yes yes 0 0 0 0 5.5 0.5 1 1 50.685 50.685 2 0.013657 15668 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.833 45.331 168.16 155.11 99.228 103.83 158.88 47.142 158 158 102 102 158 46 2 2 1 1 2 1 9319.6 21071 2798 20279 48843;48844 56604;56605 56605 2 VITAFNDGLNHLDSLK Deamidation (N) 1756.8996 0.89956426 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 1 0 0 6 0 1 73.043 73.043 3 1.0563E-05 26208 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.013 60.418 0 38.231 68.036 0 76.124 37.27 0 37 65 0 74 37 0 1 1 0 1 1 6265.6 21072 562 20280 48845 56606 56606 160;161 1 VITAFNDGLNHLDSLK Unmodified 1755.9155 0.91554867 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 0 0 0 8.88 1.96 2 3 1 1 1 75.56 75.56 3;4 9.7712E-68 26103 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 199.84 159.29 1273.3 1331.5 1332.6 1447.7 1584 534.14 1198 1339 1350 1417 1582 517 11 9 9 9 10 5 410420 21073 562 20280 48846;48847;48848;48849;48850;48851;48852;48853 56607;56608;56609;56610;56611;56612;56613;56614;56615;56616;56617;56618 56612 12 VITEEEK Unmodified 846.43346 0.43346336 1574 P47963 Rpl13 60S ribosomal protein L13 yes yes 0 0 0 0 4 0 1 45.051 45.051 2 0.03811 13911 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.923 37.654 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21074 1574 20281 48854 56619 56619 1 VITEYLNAQESAK Unmodified 1464.746 0.74602373 2276 Q78PY7 Snd1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 0 7 0 1 67.088 67.088 3 8.457E-05 22555 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.904 57.522 59.155 73.161 94.856 0 45.122 87.19 56 74 92 0 46 83 1 1 1 0 1 1 4074.5 21075 2276 20282 48855 56620 56620 1 VITFHKK Unmodified 871.52797 0.52797287 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 1 12 0 1 44.454 44.454 4 0.023243 8232 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.961 16.826 0 48.944 0 61.208 0 99.138 0 46 0 56 0 93 0 1 0 1 0 1 2877.5 21076 1581 20283 48856 56621 56621 1 VITIANR Unmodified 785.47594 0.4759373 3172 Q9EQF6 Dpysl5 Dihydropyrimidinase-related protein 5 yes yes 0 0 0 0 9 0 1 47.053 47.053 2 0.051549 11813 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.134 15.486 148.7 88.925 0 151.93 0 0 139 93 0 139 0 0 1 1 0 1 0 0 36878 21077 3172 20284 48857 56622 56622 1 VITIMQNPR Unmodified 1070.5906 0.59064948 340 F6YVP7;A0A1Y7VKY1;P62270;S4R1N6 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 10.5 0.5 1 1 56.605 56.605 2 0.00050896 14508 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.08 93.895 68.385 91.821 228.77 125.29 110.17 66.146 65 93 222 129 111 65 1 1 2 2 1 1 20392 21078 340 20285 48858;48859 56623;56624 56623 2 VITQIPGATSPGK Unmodified 1267.7136 0.71360139 1999 Q3UNH4 Gprin1 G protein-regulated inducer of neurite outgrowth 1 yes yes 0 0 0 0 11 2 1 1 58.821 58.821 3 0.001211 17422 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.196 40.592 118.51 78.736 100.03 111.49 84.521 166.02 111 74 93 102 83 158 1 1 1 1 1 2 17733 21079 1999 20286 48860;48861 56625;56626 56625 2 VITSGFNALEK Unmodified 1177.6343 0.63428844 338 Q9WVL0;A0A1Y7VJZ2;A0A1Y7VNC1 Gstz1 Maleylacetoacetate isomerase yes no 0 0 0 0 8 0 1 68.005 68.005 3 0.001352 22341 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.633 30.762 29.495 66.571 35.891 0 47.137 28.503 28 65 37 0 46 28 1 1 1 0 1 1 4110.8 21080 338 20287 48862 56627 56627 1 VITVDGNICSGK Unmodified 1261.6336 0.63363651 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 58.337 58.337 2;3 6.9382E-18 17890 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 139.32 81.465 233.84 135.16 165.47 137.36 249.93 153.07 222 139 167 139 250 148 3 1 2 2 2 1 18489 21081 2859 20288 48863;48864;48865;48866 56628;56629;56630;56631 56629 4 VITVLVGNK Unmodified 941.59097 0.59096706 2817 Q923S9;D3YV16 Rab30 Ras-related protein Rab-30 yes no 0 0 0 0 11.5 0.5 1 1 68.755 68.755 2 0.00017836 17344 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.04 44.551 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5861.5 21082 2817 20289 48867;48868 56632;56633 56633 2 VITVPHK Unmodified 792.48577 0.48577371 768 D3Z3F4;F7C846;G3XA66;D3YVW0;G3UXX9 Mtx1 yes no 0 0 0 0 10 0 1 47.257 47.257 3 0.0091962 10600 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.374 28.614 79.128 54.248 0 142.09 0 0 74 56 0 130 0 0 1 1 0 1 0 0 5656.3 21083 768 20290 48869 56634 56634 1 VITWTTEPK Unmodified 1073.5757 0.57571092 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 9 0 1 63.049 63.049 2 0.0025102 19326 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.692 46.823 0 0 58.064 56.738 53.643 67.759 0 0 56 56 56 65 0 0 1 1 1 1 4421.1 21084 934 20291 48870 56635 56635 1 VIVDTSDLPDP Unmodified 1169.5816 0.58158416 1984 Q3UHJ1;Q60803 Traf3 TNF receptor-associated factor 3 yes no 0 0 0 0 3.5 0.5 1 1 76.17 76.17 2 1.4939E-07 28173 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.86 89.237 20.057 58.129 6.1493 0 0 20.254 19 56 9 0 0 19 1 1 1 0 0 1 3050.1 21085 1984 20292 48871;48872 56636;56637 56637 2 VIVEHAR Unmodified 822.47119 0.47118627 1940 Q3TWW8;A0A0A6YXX6 Srsf6 Serine/arginine-rich splicing factor 6 no no 0 0 0 0 5.5 0.5 1 1 30.407 30.407 3 0.0076117 6098 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.39 75.818 20.205 28.319 6.6141 29.697 27.255 19.476 19 28 9 28 28 19 1 1 1 1 1 1 1594 21086 1940 20293 48873;48874 56638;56639 56639 2 VIVLWTANTER Unmodified 1300.7139 0.71393574 3205 Q9JHU9 Isyna1 Inositol-3-phosphate synthase 1 yes yes 0 0 0 0 11.5 0.5 1 1 72.038 72.038 2 4.1891E-16 18566 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 164.97 75.924 0 93.107 95.04 0 41.975 26.518 0 89 93 0 41 26 0 2 2 0 1 1 26240 21087 3205 20294 48875;48876 56640;56641 56641 2 VIVMTTK Unmodified 790.46226 0.46226107 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 11 0 1 55.783 55.783 2 0.033663 13870 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.451 30.104 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21088 1512 20295 48877 56642 56642 1 VIVNFAPTIQEIK Unmodified 1470.8446 0.84461556 415 D3Z4T6;A0A4W9;Q80Z24 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 10.1 1.45 1 2 2 2 1 79.993 79.993 2;3 9.6756E-09 27346 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.959 69.105 533.46 269.9 283.02 536.03 416.47 381.28 500 278 277 509 417 362 7 4 4 7 5 3 100450 21089 415 20296 48878;48879;48880;48881;48882;48883;48884;48885 56643;56644;56645;56646;56647;56648;56649;56650;56651 56646 9 VIVVGNPANTNCLTASK Unmodified 1756.9142 0.91416847 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 0 0 0 10.3 1.97 1 2 1 2 63.844 63.844 3;4 3.3937E-25 22823 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.01 111.46 631.19 513.5 438.06 539.73 650.08 366.84 592 520 435 518 653 352 6 6 5 5 6 5 490740 21090 1373 20297 48886;48887;48888;48889;48890;48891 56652;56653;56654;56655;56656;56657;56658;56659 56658 8 VIVVGNPANTNCLTASK Deamidation (N) 1757.8982 0.89818405 1373 P14152;B1ATQ3 Mdh1 Malate dehydrogenase, cytoplasmic yes no 0 1 0 0 9 0 1 65.222 65.222 3 1.2736E-05 20383 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.446 46.011 59.711 74.71 0 59.492 91.23 96.535 56 74 0 56 93 93 1 1 0 1 1 1 8351.8 21091 1373 20297 48892 56660 56660 442 1 VIVVPTAR Unmodified 853.53854 0.53853756 2413 Q8BIJ6 Iars2 Isoleucine--tRNA ligase, mitochondrial yes yes 0 0 0 0 10 0 1 53.536 53.536 2 0.015168 13081 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.097 59.247 98.654 90.391 114.18 0 0 108.73 93 93 111 0 0 102 1 1 1 0 0 1 7512.3 21092 2413 20298 48893 56661 56661 1 VIVWDSFTTNK Unmodified 1308.6714 0.67140222 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 76.025 76.025 2;3 6.5842E-06 23138 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.95 77.259 69.057 121.96 113.29 96.834 131.72 87.994 65 120 111 92 130 84 2 3 3 2 2 2 35978 21093 1752 20299 48894;48895;48896;48897 56662;56663;56664;56665 56663 4 VIYDFIEK Unmodified 1025.5433 0.54334816 2770 Q91YD9 Wasl Neural Wiskott-Aldrich syndrome protein yes yes 0 0 0 0 7 0 1 78.101 78.101 2 0.017341 27696 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.165 42.438 39.701 0 0 60.355 45.344 0 37 0 0 56 46 0 1 0 0 1 1 0 3068 21094 2770 20300 48898 56666 56666 1 VIYQSLEGAVQAGQLK Unmodified 1702.9254 0.92538508 3266 Q9QXS1;E9Q3W4;A0A0R4J218;A0A0R4J223;E9Q9J6;A0A0R4J221;E9PW24 Plec Plectin yes no 0 0 0 0 8.5 0.5 1 1 76.574 76.574 3 9.5676E-08 25676 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.79 82.695 39.307 36.123 35.577 46.957 63.845 57.874 37 37 37 46 65 56 1 1 1 1 1 1 9417.5 21095 3266 20301 48899;48900 56667;56668 56668 2 VKDEFTAEK Unmodified 1065.5342 0.53424004 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 5.5 0.5 1 1 50.101 50.101 3 0.0059709 15194 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 75.819 43.499 359.5 390.88 697.86 575.14 798.45 865.19 340 399 692 578 817 833 1 1 2 2 2 2 42573 21096 1424 20302 48901;48902 56669;56670 56670 2 VKDSDDVPMVLVGNK Unmodified 1614.8287 0.8287075 2126 Q61411 Hras GTPase HRas;GTPase HRas, N-terminally processed no no 0 0 0 1 8 0 1 64.6 64.6 4 0.0071284 20732 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.863 29.435 39.701 0 0 0 48.116 0 37 0 0 0 46 0 1 0 0 0 1 0 1818.1 21097 2126 20303 48903 56671 56671 1 VKEALAGLLK Unmodified 1040.6594 0.65938097 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 1 12 0 1 73.449 73.449 3 0.0070621 19078 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.439 22.99 0 47.653 77.209 0 46.477 47.71 0 46 74 0 46 46 0 1 1 0 1 1 3298.9 21098 581 20304 48904 56672 56672 1 VKEESSYLLESNR Unmodified 1552.7733 0.77330111 3056 Q9D394;A0A0G2JFT8 Rufy3 Protein RUFY3 yes no 0 0 0 1 5 0 1 54.243 54.243 3 0.0069689 18002 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.199 32.804 68.974 63.24 75.926 0 74.438 86.354 65 65 74 0 74 83 1 1 1 0 1 1 4355.4 21099 3056 20305 48905 56673 56673 1 VKEFCENLSADCR Unmodified 1626.713 0.71302582 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 1 7 0 1 52.59 52.59 3 0.00049725 15664 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.98 52.841 54.723 0 0 54.273 78.167 57.465 51 0 0 51 79 56 1 0 0 1 1 1 7914 21100 2272 20306 48906 56674 56674 1 VKEGMNIVEAMER Unmodified 1504.7378 0.737784 1404 P17742;A0A1L1SST0 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 1 10.5 2.5 1 1 65.1 65.1 3 0.004532 21699 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.831 19.612 0 215.37 100.87 183.69 141.63 148.17 0 204 102 176 139 139 0 2 1 2 1 1 84452 21101 1404 20307 48907;48908 56675;56676 56675 2 VKETELELK Unmodified 1087.6125 0.61249036 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 1 9.5 3.5 1 1 54.553 54.553 3 0.005945 17608 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.153 36.385 431.41 291.93 463.96 0 433.16 453.48 406 309 447 0 429 437 1 1 1 0 1 1 25872 21102 575 20308 48909;48910 56677;56678 56678 2 VKEVLLDEDDDLWIALR Unmodified 2041.0732 0.073171528 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 1 7.57 2.32 3 2 1 1 91.097 91.097 3 0.00047077 35068 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.307 49.673 19 49.368 84.605 77.491 139.59 95.722 19 47 83 74 140 93 1 2 2 1 4 3 15342 21103 1160 20309 48911;48912;48913;48914;48915;48916;48917 56679;56680;56681;56682;56683;56684;56685 56680 7 VKEYEEEIHSLK Unmodified 1502.7617 0.76167379 992 F6SEU4;A0A338P799;A0A140T8K9;A0A0A6YVS6;A0A2R8VHH2;J3QQ18;A0A2R8VH83;A0A0J9YVH8;A0A0J9YV63;A0A0J9YUZ2 Syngap1 Ras/Rap GTPase-activating protein SynGAP yes no 0 0 0 1 5 0 1 61.261 61.261 4 0.03417 21260 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 42.095 6.4501 49.358 0 0 39.601 44.657 47.762 46 0 0 37 46 46 1 0 0 1 1 1 4109.2 21104 992 20310 48918 56686 56686 1 VKGDGTISAITEK Unmodified 1317.714 0.71399532 1497 P31650 Slc6a11 Sodium- and chloride-dependent GABA transporter 3 yes yes 0 0 0 1 7 0.816 1 1 1 54.006 54.006 3 0.00034649 16408 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.824 57.274 535.9 258.44 62.685 342.8 694.31 394.86 501 269 65 329 688 389 4 3 1 4 3 3 45639 21105 1497 20311 48919;48920;48921 56687;56688;56689;56690 56689 4 VKGFCQVVISSNLR Unmodified 1605.8661 0.86609606 2727 Q91V14;A0A076FR46 Slc12a5 Solute carrier family 12 member 5 yes no 0 0 0 1 1 0 1 62.606 62.606 3 0.028637 20850 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 43.184 30.306 0 39.368 0 20.767 0 29.848 0 37 0 19 0 28 0 1 0 1 0 1 2581.5 21106 2727 20312 48922 56691 56691 1 VKIEPGVDPDDTYNETPYEK Unmodified 2308.0747 0.074687671 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 1 5 0 1 61.51 61.51 4 3.9425E-05 21498 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.298 33.262 0 0 0 0 46.462 78.624 0 0 0 0 47 75 0 0 0 0 1 1 3542.3 21107 2686 20313 48923 56692 56692 1 VKIESVK Unmodified 801.496 0.49600404 1424 P20357;Q80X35;Q80ZL4;Q3TLQ0;G3UZV6;G3UWW1;G3UYR3 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 9 0 1 46.059 46.059 3 0.040193 11315 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.547 29.521 831.39 755.86 1013 0 1345.5 1331.4 784 779 982 0 1330 1285 1 1 1 0 1 1 52938 21108 1424 20314 48924 56693 56693 1 VKNYSNLLAFCR Unmodified 1483.7606 0.76056836 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 1 12 0 1 63.074 63.074 3 0.0069233 15314 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.02 39.767 78.679 72.425 60.178 0 0 78.884 74 74 60 0 0 74 1 1 1 0 0 1 5473.9 21109 1265 20315 48925 56694 56694 1 VKPAPDETSFSEALLK Unmodified 1730.9091 0.90906631 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 1 7.5 0.5 1 1 66.916 66.916 3 0.000136 21831 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.429 49.878 48.589 123.16 138.22 102 66.393 59.696 46 121 139 102 65 56 1 2 2 2 1 1 9035.3 21110 2991 20316 48926;48927 56695;56696 56696 2 VKPFMTGAAEQIK Unmodified 1418.7592 0.75917137 1764 P63028;D3YU75 Tpt1 Translationally-controlled tumor protein yes no 0 0 0 1 9.5 0.5 1 1 61.661 61.661 3 1.3076E-07 16659 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 114.74 66.739 108.17 74.239 316.9 206.45 106.94 139.79 102 79 306 208 111 134 1 1 2 2 1 1 45671 21111 1764 20317 48928;48929 56697;56698 56698 2 VKPLLQVTR Unmodified 1052.6706 0.67061436 1974;1149;391 A0A2R8VHF9;E9QPE7;A0A338P6K2;O08638;Q3UH59;Q61879;Q5SV64;Q6URW6;K3W4R2;A0A140LI60 Myh11;Myh10;Myh14 Myosin-11;Myosin-10;Myosin-14 no no 0 0 0 1 1 0 1 53.947 53.947 3 0.00055888 16617 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 111.61 77.52 91.293 72.974 103.75 88.459 81.982 113.85 86 76 104 88 86 109 1 1 1 1 1 1 14133 21112 391;1974;1149 20318 48930 56699 56699 1 VKPLQDQNELFGK Unmodified 1514.8093 0.80929269 3066 Q9D554 Sf3a3 Splicing factor 3A subunit 3 yes yes 0 0 0 1 9 0 1 60.982 60.982 3 0.018265 18314 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.31 27.76 59.878 0 35.298 99.545 0 59.696 56 0 37 93 0 56 1 0 1 1 0 1 3341.4 21113 3066 20319 48931 56700 56700 1 VKPVLMNSK Unmodified 1014.5896 0.58958685 2095 Q60902;A0A1D5RLS1 Eps15l1 Epidermal growth factor receptor substrate 15-like 1 yes no 0 0 0 1 12 0 1 50.748 50.748 3 0.013477 10483 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.426 37.805 109.45 0 0 0 145.39 0 102 0 0 0 139 0 1 0 0 0 1 0 9323.2 21114 2095 20320 48932 56701 56701 1 VKTPWELK Unmodified 999.57532 0.57531699 1303 P03930 Mtatp8 ATP synthase protein 8 yes yes 0 0 0 1 9 0 1 59.089 59.089 3 0.029063 17519 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.841 22.097 108.43 0 170.41 0 0 0 102 0 158 0 0 0 1 0 1 0 0 0 8082.8 21115 1303 20321 48933 56702 56702 1 VKVDNQHDFQDIASVVALTK Unmodified 2226.1644 0.16444615 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 1 9.43 2.32 1 3 1 2 72.627 72.627 3;4;5 9.8285E-30 24698 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.33 84.674 304.47 366.75 446.53 273.76 385.87 372.37 287 371 443 280 383 367 3 6 5 5 4 4 180370 21116 1282 20322 48934;48935;48936;48937;48938;48939;48940 56703;56704;56705;56706;56707;56708;56709;56710 56707 8 VKVENHYDFQDIASVVALTQTYATAEPFIDAK Unmodified 3582.7882 0.78822948 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 1 9 2.35 1 2 1 94.086 94.086 4;5 3.2601E-20 36812 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.45 61.491 45.885 62.091 63.455 41.534 66.005 67.407 43 60 60 38 65 65 3 2 2 3 2 3 15693 21117 2173 20323 48941;48942;48943;48944 56711;56712;56713;56714;56715;56716 56716 6 VKVGVNGFGR Unmodified 1031.5876 0.58761301 1395;3448 P16858;A0A1D5RLD8;S4R1N5;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 11.5 0.5 1 1 47.526 47.526 3 0.010476 9429 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.518 36.175 0 167.07 668.71 155.43 142.5 211.27 0 160 670 155 150 202 0 1 2 1 1 1 45644 21118 1395;3448 20324 48945;48946 56717;56718 56718 2 VLAAVYK Unmodified 762.46398 0.46397563 1309;1308 P05063;Q91Y97;P05064;A6ZI44;Q9CPQ9;A6ZI46;D3YWI1;A6ZI47 Aldoc;Aldob;Aldoa;Aldoart1;Aldoart2 Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase B;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 0 9.57 3.7 1 1 1 2 1 1 59.678 59.678 2;3 0.0060976 17834 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.79 30.551 6094.2 10682 5635.4 6456.4 6185.6 14256 5732 10458 5659 6301 6409 13532 10 8 10 10 8 11 4600800 21119 1308;1309 20325 48947;48948;48949;48950;48951;48952;48953 56719;56720;56721;56722;56723;56724;56725;56726;56727;56728;56729;56730;56731;56732;56733 56720 15 VLACGGDGTVGWILDCIEK Unmodified 2061.9863 0.98634713 2200 Q6NS52 Dgkb Diacylglycerol kinase beta yes yes 0 0 0 0 8 0 1 94.456 94.456 3 0.018053 34178 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 32.565 15.059 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21120 2200 20326 48954 56734 56734 1 VLADLGVTPDK Unmodified 1126.6234 0.6233894 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 7.67 0.471 1 2 70.816 70.816 2;3 0.00045694 24315 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.763 45.876 39.701 0 58.529 46.304 92.203 85.847 37 0 56 46 93 83 1 0 1 1 2 2 10786 21121 1388 20327 48955;48956;48957 56735;56736;56737 56735 3 VLADPSDDTK Unmodified 1059.5084 0.50841922 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 5 0 1 50.539 50.539 2 0.0014071 16272 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.906 61.819 39.564 27.124 0 58.95 61.938 97.371 37 28 0 55 65 93 1 1 0 1 1 1 3000.1 21122 3266 20328 48958 56738 56738 1 VLAELPATELVQACR Unmodified 1668.8869 0.88689108 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 9.33 2.62 1 1 1 76.29 76.29 2;3 0.00032968 26869 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.813 59.299 0 20.216 0 49.066 103.15 37.603 0 19 0 46 102 37 0 1 0 1 2 1 7310.9 21123 2319 20329 48959;48960;48961 56739;56740;56741 56739 3 VLAFLSLAEVGQVAGPGPQR Unmodified 2008.1106 0.11056009 2266 Q6ZQ73 Cand2 Cullin-associated NEDD8-dissociated protein 2 yes yes 0 0 0 0 12 0 1 94.988 94.988 3 0.0026909 27254 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 39.863 29.524 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21124 2266 20330 48962 56742 56742 1 VLAFTSIGDGPLSSDIQVITQTGVPGQPLNFK Unmodified 3298.7449 0.7449081 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9 Ptprd Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta yes no 0 0 0 0 10 0 1 101.61 101.61 4 0.0026368 33007 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 32.612 22.642 0 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 1149.7 21125 642 20331 48963 56743 56743 1 VLAFTSVGDGPLSDPIQVK Unmodified 1942.0411 0.041143118 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 8.33 0.471 2 1 85.889 85.889 3;4 4.9718E-08 30840 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.95 64.866 20.154 29.792 39.127 38.146 94.848 19.73 19 28 37 38 93 19 1 1 1 2 3 1 7722.5 21126 568 20332 48964;48965;48966 56744;56745;56746 56744 3 VLAGETLSVNDPPDVLDR Unmodified 1908.9793 0.97927114 306 Q45VK5;A0A1L1STE4;Q9Z1X4 Ilf3 Interleukin enhancer-binding factor 3 yes no 0 0 0 0 4 0 1 73.362 73.362 3 2.5316E-05 26940 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.809 48.671 30.044 0 0 20.767 0 0 28 0 0 19 0 0 1 0 0 1 0 0 3562.7 21127 306 20333 48967 56747 56747 1 VLAGQEYAAK Unmodified 1048.5553 0.55530983 1355 P11798;F8WIS9;D3Z7K9;F6WHR9 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 8.38 2.18 2 1 2 1 1 1 51.515 51.515 2;3 1.4749E-28 15298 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 192.92 72.799 2731.8 1987.5 3046.1 2237.7 1774.1 2584.9 2569 2015 3008 2236 1865 2464 8 9 9 8 8 7 737340 21128 1355 20334 48968;48969;48970;48971;48972;48973;48974;48975 56748;56749;56750;56751;56752;56753;56754;56755;56756;56757 56751 10 VLAGSAQKPASR Unmodified 1183.6673 0.6673199 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 1 9.5 0.5 1 1 38.021 38.021 3 0.00088663 7105 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.641 33.071 88.692 130.55 106.9 59.702 80.09 116.04 83 130 102 56 83 111 1 2 1 1 1 1 10586 21129 1520 20335 48976;48977 56758;56759 56759 2 VLAIEYFFEEK Unmodified 1386.7071 0.70711903 3371 Q9Z140;Q3UYN2;E9QA77 Cpne6 Copine-6 yes no 0 0 0 0 9.25 2.28 1 1 1 1 95.021 95.021 2;3 0.00022119 34394 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 88.596 65.955 181.74 82.336 42.585 104.29 93.28 146.59 170 83 44 100 94 139 4 2 2 4 3 3 36135 21130 3371 20336 48978;48979;48980;48981 56760;56761;56762;56763;56764;56765 56761 6 VLALGGR Unmodified 684.42826 0.42825883 1783 P63318;Q2NKI4 Prkcg Protein kinase C gamma type;Protein kinase C yes no 0 0 0 0 10 0.816 1 1 1 50.49 50.49 2 0.010411 11794 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 122.17 46.483 1001.2 937.36 1182.4 937.44 1153.7 1153.5 944 963 1188 942 1182 1113 3 3 3 3 3 3 147340 21131 1783 20337 48982;48983;48984 56766;56767;56768;56769 56767 4 VLALIQAWADAFR Unmodified 1472.814 0.81398414 2058 Q5SRX1 Tom1l2 TOM1-like protein 2 yes yes 0 0 0 0 13 0 1 115.86 115.86 3 0.00094323 44949 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.088 37.797 0 0 1.828 7.5421 0 0 0 0 2 7 0 0 0 0 1 1 0 0 754.64 21132 2058 20338 48985 56770 56770 1 VLALLDKPPFLTQLHSCFQTVDR Unmodified 2697.4312 0.4312423 2030;1425 P20444;Q4VA93 Prkca Protein kinase C alpha type;Protein kinase C no no 0 0 0 1 11.5 0.5 1 1 86.142 86.142 4 2.2491E-18 24073 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.44 98.98 0 33.52 31.595 22.839 22.189 23.885 0 32 32 23 23 23 0 1 1 1 1 1 15618 21133 1425;2030 20339 48986;48987 56771;56772;56773 56772 3 VLALPEPSPAAPTLR Unmodified 1530.877 0.87697832 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 70.718 70.718 3 1.4182E-05 23673 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.633 60.421 69.745 0 0 30.604 0 0 65 0 0 28 0 0 1 0 0 1 0 0 6855.8 21134 3266 20340 48988 56774 56774 1 VLALPGKPPFLTQLHSCFQTMDR Unmodified 2655.3665 0.36653355 1796 P68404 Prkcb Protein kinase C beta type yes yes 0 0 0 1 4.67 5.19 2 1 83.098 83.098 4 2.0091E-15 21187 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.326 76.015 89.9 23.202 19.344 119.91 84.277 86.342 84 24 19 111 88 83 3 2 1 3 3 2 19065 21135 1796 20341 48989;48990;48991 56775;56776;56777;56778 56777 4 VLALSFDAPGR Unmodified 1144.6241 0.6240581 2726 Q91V09;S4R225 Wdr13 WD repeat-containing protein 13 yes no 0 0 0 0 9.5 0.5 1 1 71.321 71.321 2 2.5324E-05 21162 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.19 76.078 0 78.736 0 70.004 130.13 76.75 0 74 0 65 130 74 0 1 0 1 2 1 14682 21136 2726 20342 48992;48993 56779;56780 56780 2 VLAMSGDPNYLHR Unmodified 1471.7242 0.72418285 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 7.5 0.5 1 1 55.227 55.227 3 0.00010934 16246 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.667 72.128 128.7 147.71 64.835 138.23 0 217.46 121 148 65 130 0 204 2 2 1 2 0 2 27757 21137 2272 20343 48994;48995 56781;56782 56782 2 VLANPGNSQVAR Unmodified 1224.6575 0.65748349 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 42.129 42.129 2 7.8435E-09 10917 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 115.7 89.097 159.57 36.703 20.456 69.452 151.37 37.539 149 37 19 65 149 37 4 1 1 2 3 1 27363 21138 1798 20344 48996;48997;48998;48999 56783;56784;56785;56786 56783 4 VLANQYK Unmodified 834.45995 0.45995289 1558 P46664 Adss Adenylosuccinate synthetase isozyme 2 yes yes 0 0 0 0 8.5 0.5 1 1 47.875 47.875 2 0.0011066 12090 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.54 49.763 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21139 1558 20345 49000;49001 56787;56788 56788 2 VLAQATSDLVNAMR Unmodified 1487.7766 0.77661235 287 E9PUM4;A0A1L1SQ51;Q71LX4 Tln2 Talin-2 yes no 0 0 0 0 9.5 0.5 1 1 80.912 80.912 2;3 0.017966 25514 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.207 19.637 29.744 27.331 55.254 28.117 45.844 28.54 28 28 56 28 46 28 1 1 2 1 1 1 4664.4 21140 287 20346 49002;49003 56789;56790 56790 2 VLAQDVYAK Unmodified 1005.5495 0.54949617 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 7 0 1 57.431 57.431 2 3.2951E-05 17985 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.98 91.127 79.128 54.248 0 79.386 79.515 106.46 74 56 0 74 83 102 1 1 0 1 1 1 6737.3 21141 416 20347 49004 56791 56791 1 VLAQLLGMVCEVRPQVHPNYR Unmodified 2478.2988 0.29878834 3324 Q9WTT4;B0V2H4;G5E923 Atp6v1g2 V-type proton ATPase subunit G 2 yes no 0 0 0 1 13 0 1 83.049 83.049 4 0.012358 32414 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 36.111 27.015 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 5547.4 21142 3324 20348 49005 56792 56792 1 VLAQLLR Unmodified 811.52797 0.52797287 3268 Q9QXV0 Pcsk1n ProSAAS;KEP;Big SAAS;Little SAAS;Big PEN-LEN;PEN;PEN-20;PEN-19;Little LEN;Big LEN yes yes 0 0 0 0 6.5 5.5 1 1 68.784 68.784 2 0.0056972 17302 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 137.44 0 307.28 327.91 339.93 296.75 1392.5 83.049 289 333 346 314 1347 83 1 2 2 2 2 1 361040 21143 3268 20349 49006;49007 56793;56794 56794 2 VLAQNSGFDLQETLVK Unmodified 1760.9309 0.93086439 1826 P80317 Cct6a T-complex protein 1 subunit zeta yes yes 0 0 0 0 7.5 0.5 1 1 76.766 76.766 3;4 1.2333E-07 26540 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.98 69.189 78.615 72.247 71.065 95.894 80.792 77.645 74 74 74 93 84 75 2 2 2 2 2 2 10189 21144 1826 20350 49008;49009 56795;56796 56796 2 VLASVSLGK Unmodified 872.53312 0.53311783 2109 Q61097;A0A2I3BR95;A0A140LHP4 Ksr1 Kinase suppressor of Ras 1 yes no 0 0 0 0 11 0 1 63.243 63.243 2 0.00083161 17045 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.5 97.112 0 84.056 0 0 0 99.138 0 79 0 0 0 93 0 1 0 0 0 1 6549.4 21145 2109 20351 49010 56797 56797 1 VLATAFDTTLGGR Unmodified 1320.7038 0.70376498 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 9.5 0.5 1 1 73.253 73.253 2 3.4586E-60 24181 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 208.15 168.09 49.074 200.65 210.83 238.58 71.318 57.661 46 195 209 231 74 56 1 2 1 2 1 1 41264 21146 1957 20352 49011;49012 56798;56799 56798 2 VLATTFDPYLGGR Unmodified 1408.7351 0.73506511 1581 P48722;E0CY23 Hspa4l Heat shock 70 kDa protein 4L yes no 0 0 0 0 9.8 1.72 1 2 1 1 74.645 74.645 2;3 4.2144E-14 28188 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.44 84.024 172.83 171.78 173.78 312.03 118.67 155.45 162 172 176 297 121 149 4 4 3 5 2 3 73660 21147 1581 20353 49013;49014;49015;49016;49017 56800;56801;56802;56803;56804 56804 5 VLATVTK Unmodified 730.45889 0.45889025 1570 P47911 Rpl6 60S ribosomal protein L6 yes yes 0 0 0 0 10 0 1 53.149 53.149 2 0.040319 12998 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.116 10.201 78.344 92.001 99.799 104.39 61.205 57.95 74 93 102 102 65 56 1 1 1 1 1 1 9235.7 21148 1570 20354 49018 56805 56805 1 VLAVNPQNR Unmodified 1009.5669 0.56687757 2174 Q64378 Fkbp5 Peptidyl-prolyl cis-trans isomerase FKBP5;Peptidyl-prolyl cis-trans isomerase FKBP5, N-terminally processed yes yes 0 0 0 0 8 0 1 44.923 44.923 2 0.019299 11528 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.676 45.347 0 0 70.33 0 0 59.696 0 0 65 0 0 56 0 0 1 0 0 1 2782 21149 2174 20355 49019 56806 56806 1 VLAVNQENEHLMEDYER Unmodified 2087.9582 0.95821812 310 A0A1L1SV25;P57780 Actn4 Alpha-actinin-4 no no 0 0 0 0 3 0 1 58.95 58.95 3 2.4031E-05 20796 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 69.188 62.13 0 29.017 46.342 37.924 45.063 38.156 0 28 46 38 46 37 0 1 1 1 1 1 3564.8 21150 310 20356 49020 56807 56807 1 VLAVNQENEQLMEDYEK Unmodified 2050.9517 0.95173576 418 A1BN54;Q7TPR4 Actn1 Alpha-actinin-1 yes no 0 0 0 0 13 0 1 69.937 69.937 3 7.6218E-06 25985 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.82 50.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21151 418 20357 49021 56808 56808 1 VLAVNQENER Unmodified 1170.5993 0.59929991 3209 Q9JI91 Actn2 Alpha-actinin-2 yes yes 0 0 0 0 5.5 0.5 1 1 42.64 42.64 2 0.03235 11914 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.432 32.875 39.529 0 58.29 47.193 37.407 0 37 0 56 47 37 0 1 0 2 2 1 0 4887.5 21152 3209 20358 49022;49023 56809;56810 56810 2 VLCCLTFLVK Unmodified 1251.6719 0.67193627 2723 Q8VI75;Q5U4C5 Ipo4 Importin-4 yes no 0 0 0 0 12 0 1 86.882 86.882 3 0.0022958 24438 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.04 36.515 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1663.1 21153 2723 20359 49024 56811 56811 1 VLCLAVAVGHVK Unmodified 1264.7326 0.73256269 1613 P53026;Q5XJF6 Rpl10a 60S ribosomal protein L10a;Ribosomal protein yes no 0 0 0 0 12 0 1 67.647 67.647 3 0.037989 16884 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 40.727 21.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21154 1613 20360 49025 56812 56812 1 VLCMDAK Unmodified 835.3932 0.39319523 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 55.242 55.242 2 0.027285 16990 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.925 46.554 108.68 0 286.24 71.528 93.306 233.99 102 0 268 74 93 222 1 0 2 1 1 2 20415 21155 3397 20361 49026;49027 56813;56814 56813 2 VLCPIIQTADYPINLAAIK Unmodified 2112.1653 0.16529777 934;12 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1;A0A1L1ST22;Q80TV8;A0A087WRK0;E9QKH0;E9QNY9;A0A087WRE8;A0A087WP42;A0A087WQ95;A0A0A6YXZ1;A0A087WQ31;A0A087WS18;A0A087WQF1;A0A087WNW8;J3QP81;E9Q6L0 Clasp2;Clasp1 CLIP-associating protein 2;CLIP-associating protein 1 no no 0 0 0 0 9.75 0.829 2 1 1 91.863 91.863 3;4 3.2572E-08 29865 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.125 51.637 39.522 0 79.869 0 38.702 0 37 0 74 0 37 0 1 0 2 0 1 0 4120.5 21156 934;12 20362 49028;49029;49030;49031 56815;56816;56817;56818 56817 4 VLDALFPCVQGGTTAIPGAFGCGK Unmodified 2435.1977 0.19773689 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 10.9 1.45 2 2 2 1 2 93.074 93.074 3;4;5 2.054E-12 37057 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 74.584 63.895 128.15 531.45 309.33 573.05 482.88 352.66 120 506 297 540 485 334 4 7 8 9 6 7 300480 21157 1596 20363 49032;49033;49034;49035;49036;49037;49038;49039;49040 56819;56820;56821;56822;56823;56824;56825;56826;56827;56828;56829;56830;56831;56832;56833 56833 15 VLDASWYSPGTR Unmodified 1350.6568 0.65681479 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 9 0 1 66.353 66.353 2 0.014564 20927 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.718 22.528 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21158 1608 20364 49041 56834 56834 1 VLDAYGLLGVLR Unmodified 1287.7551 0.75507227 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10 0.816 1 1 1 90.866 90.866 2 0.00072646 29549 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.865 48.744 20.292 88.008 51 120.12 63.878 0 19 84 51 111 65 0 1 2 1 2 1 0 34370 21159 927 20365 49042;49043;49044 56835;56836;56837 56836 3 VLDDGELLVQQTK Unmodified 1456.7773 0.77732386 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 6.75 2.63 1 2 2 1 1 1 71.357 71.357 2;3 1.6267E-49 26047 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 202.65 139.58 503.53 331.93 431.63 352.88 449.86 711.77 473 335 425 344 465 678 8 4 7 5 8 9 310400 21160 1554 20366 49045;49046;49047;49048;49049;49050;49051;49052 56838;56839;56840;56841;56842;56843;56844;56845;56846;56847 56842 10 VLDEFSK Unmodified 836.42798 0.42798405 2945 Q9CQW1 Ykt6 Synaptobrevin homolog YKT6 yes yes 0 0 0 0 6 0 1 62.542 62.542 2 0.016903 21305 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.212 45.109 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21161 2945 20367 49053 56848 56848 1 VLDELTLTK Unmodified 1030.591 0.59102664 659 CON__P13645 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 72.871 72.871 2;3 0.00085373 27222 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.62 78.327 236.15 90.087 398.55 135.01 136.65 421.43 222 93 380 140 139 399 3 2 4 3 2 4 32633 + 21162 659 20368 49054;49055;49056;49057 56849;56850;56851;56852 56852 4 VLDFEHFLPMLQTVAK Unmodified 1886.9964 0.99644153 316 A0A1W2P6F6;A0A1W2P7Q9;Q60605;A0A1W2P6G5 Myl6 Myosin light polypeptide 6 yes no 0 0 0 0 10.8 1.47 1 2 1 1 95.208 95.208 3;4 3.0374E-05 31099 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.461 77.382 68.191 8.9279 30.248 5.1049 62.258 47.827 65 9 28 5 61 46 5 1 2 1 3 3 30941 21163 316 20369 49058;49059;49060;49061;49062 56853;56854;56855;56856;56857;56858 56856 6 VLDGIPPPYDK Unmodified 1212.639 0.63903946 1416 P19253;A0A1B0GSB2;A0A1B0GSQ6;A0A1B0GTA1;A0A1B0GS68;A0A1B0GT00 Rpl13a 60S ribosomal protein L13a yes no 0 0 0 0 6 0 1 67.698 67.698 3 0.005898 23678 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 52.693 34.961 20.126 18.386 28.28 18.204 46.63 18.923 19 19 28 19 46 19 1 1 1 1 1 1 1947.8 21164 1416 20370 49063 56859 56859 1 VLDGQEAK Unmodified 858.4447 0.44469675 150 A0A0R4J023;Q9JLZ3;F6R307;F6RT60 Auh Methylglutaconyl-CoA hydratase, mitochondrial yes no 0 0 0 0 8 3.56 1 1 1 44.952 44.952 2;3 0.013211 13609 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.639 49.994 265 239.93 380.75 329.48 430.05 316.59 249 241 380 324 436 306 3 3 4 3 4 3 24037 21165 150 20371 49064;49065;49066 56860;56861;56862;56863 56860 4 VLDHAMEAEHLVEK Unmodified 1619.7977 0.79774172 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5 0 1 59.991 59.991 4 4.2793E-05 20778 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 97.69 77.263 0 38.101 75.789 44.729 54.891 47.47 0 37 74 46 56 46 0 1 1 1 1 1 3078.4 21166 2186 20372 49067 56864 56864 1 VLDLDLFR Unmodified 989.55458 0.55458155 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 8 0 1 83.85 83.85 2 0.011497 29923 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.195 44.435 39.701 0 0 49.795 25.671 38.709 37 0 0 46 28 37 1 0 0 1 1 1 13451 21167 1460 20373 49068 56865 56865 1 VLDLQQIK Unmodified 955.57023 0.57023162 3352 Q9WVJ2;E9Q5I9 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 9 0 1 67.055 67.055 3 0.0053532 21210 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.931 21.936 0 47.816 67.461 0 37.054 47.979 0 46 65 0 37 46 0 1 1 0 1 1 4671.2 21168 3352 20374 49069 56866 56866 1 VLDNAIETEK Unmodified 1130.5819 0.58191851 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 7.33 4.03 1 1 1 57.573 57.573 2 1.3739E-08 19758 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 149.33 87.653 246.87 145.43 223.44 254.29 300.07 242.51 232 148 223 250 306 234 3 1 2 3 3 2 46485 21169 2148 20375 49070;49071;49072 56867;56868;56869 56869 3 VLDNAIETEK Deamidation (N) 1131.5659 0.5659341 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 1 0 0 6 0 1 57.406 57.406 3 0.041757 18984 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.284 16.417 59.471 34.107 74.847 64.524 109.52 105.61 56 37 74 65 111 102 1 1 1 1 1 1 21362 21170 2148 20375 49073 56870 56870 846 1 VLDNPDLTSK Unmodified 1100.5714 0.57135383 2339 Q80YA9 Cnksr2 Connector enhancer of kinase suppressor of ras 2 yes yes 0 0 0 0 6 0 1 58.101 58.101 2 0.052755 19192 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.927 9.9427 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21171 2339 20376 49074 56871 56871 1 VLDPFTIKPLDR Unmodified 1412.8028 0.80275075 1537 P40142;A0A286YE28 Tkt Transketolase yes no 0 0 0 1 10.2 1.92 1 1 1 1 73.207 73.207 3 9.0702E-08 27426 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109 80.094 278.19 101.18 226.28 299.67 369.87 157.77 260 102 222 286 361 148 3 1 3 3 3 1 168690 21172 1537 20377 49075;49076;49077;49078 56872;56873;56874;56875;56876 56876 5 VLDQVETELQR Unmodified 1328.6936 0.69359423 1276 O88741 Gdap1 Ganglioside-induced differentiation-associated protein 1 yes yes 0 0 0 0 4.5 0.5 1 1 67.396 67.396 2;3 0.0018727 24212 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.942 37.713 20.346 8.2041 0 30.604 0 29.848 19 9 0 28 0 28 1 1 0 1 0 1 2186.2 21173 1276 20378 49079;49080 56877;56878 56877 2 VLDSDGSDR Unmodified 962.4305 0.43050325 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 2.5 0.5 1 1 37.622 37.622 2 0.00089925 10746 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 111.82 95.044 108.78 178 115.14 132.3 97.508 214.68 102 176 120 129 102 204 2 3 2 2 1 2 27495 21174 607 20379 49081;49082 56879;56880;56881 56879 3 VLDSGAPIK Unmodified 898.51238 0.51238239 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 55.331 55.331 2;3 0.00095245 17946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.71 62.901 1401.8 809.78 1217.1 976.09 1313 1363.4 1317 844 1216 980 1328 1311 6 4 5 5 5 5 235290 21175 1642 20380 49083;49084;49085;49086 56882;56883;56884;56885;56886;56887 56882 6 VLDSGAPIKIPVGPETLGR Unmodified 1918.0888 0.088762013 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 1 9.29 2.43 2 2 1 2 71.987 71.987 3;4 1.5697E-26 23511 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 139.27 126.04 945.12 1019 1074.6 812.03 906.4 1240.5 890 1032 1077 816 925 1188 6 8 7 7 5 9 524900 21176 1642 20381 49087;49088;49089;49090;49091;49092;49093 56888;56889;56890;56891;56892;56893;56894;56895;56896 56894 9 VLDTAAEK Unmodified 845.44945 0.44944778 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 5.5 0.5 1 1 49.188 49.188 2 0.0067476 14958 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.47 51.749 287.26 60.498 0 61.208 81.48 234.33 268 65 0 56 83 222 2 1 0 1 1 2 12800 21177 2286 20382 49094;49095 56897;56898 56898 2 VLEAELLVLR Unmodified 1153.7071 0.70705945 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 6.5 0.5 1 1 82.372 82.372 2;3 1.1358E-05 29757 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.66 56.981 138.51 107.09 99.974 113.46 121.35 0 130 111 102 111 121 0 1 2 1 1 2 0 26196 21178 1329 20383 49096;49097 56899;56900 56900 2 VLEALHSIK Unmodified 1008.5968 0.59678072 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 61.926 61.926 2;3 5.5348E-09 19068 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 166.07 83.321 2321.6 1640.8 1197 231.28 1553.3 2066.4 2178 1708 1170 222 1541 1980 5 5 3 3 3 5 332880 21179 1296 20384 49098;49099;49100;49101 56901;56902;56903;56904;56905;56906 56902 6 VLEALLPLK Unmodified 994.64267 0.64266828 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 10.8 1.48 1 1 1 1 86.189 86.189 2;3 0.0032269 27221 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 68.224 45.204 0 118.53 107 66.95 116.11 78.884 0 112 102 65 111 74 0 3 2 2 2 1 21436 21180 1412 20385 49102;49103;49104;49105 56907;56908;56909;56910 56909 4 VLEALQVLR Unmodified 1039.639 0.63897988 805 E0CYH4;Q8C6G8 Wdr26 WD repeat-containing protein 26 yes no 0 0 0 0 10 0 1 78.316 78.316 2 0.026549 24195 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.91 36.016 39.701 0 0 49.637 34.076 68.318 37 0 0 46 37 65 1 0 0 1 1 1 3873.2 21181 805 20386 49106 56911 56911 1 VLEDDPEAAYTTR Unmodified 1478.6889 0.68890278 1880 Q03137;Q6PFV6;E9PUQ4;B7ZNN5;Q8BRB1;E9PUQ2;E9PUP9;E9PUQ0;Q60629;P29319 Epha4;Epha5;Epha3 Ephrin type-A receptor 4;Receptor protein-tyrosine kinase;Ephrin type-A receptor 5;Ephrin type-A receptor 3 yes no 0 0 0 0 2 0 1 55.71 55.71 2 1.2515E-13 18751 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 131.42 98.894 0 50.008 0 20.081 36.461 38.402 0 47 0 19 37 37 0 1 0 1 1 1 5054.6 21182 1880 20387 49107 56912 56912 1 VLEDIQLNLFTR Unmodified 1459.8035 0.80347903 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 8 0 1 88.409 88.409 3 0.0002227 31999 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.241 49.61 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 797.69 21183 2536 20388 49108 56913 56913 1 VLEDNSVPQVK Unmodified 1226.6507 0.65066678 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 8.17 3.48 2 1 1 2 57.45 57.45 2;3 4.5343E-20 19625 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 173.64 100.41 624.3 555.1 282.47 594.24 518.04 576.29 586 560 287 568 539 553 6 4 5 6 5 4 133720 21184 3016 20389 49109;49110;49111;49112;49113;49114 56914;56915;56916;56917;56918;56919 56914 6 VLEDNSVPQVK Deamidation (N) 1227.6347 0.63468237 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 1 0 0 5 0 1 59.772 59.772 3 0.0020152 20687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.2 46.262 39.084 45.215 65.416 44.999 73.359 57.603 37 46 65 46 74 56 1 1 1 1 1 1 8558.3 21185 3016 20389 49115 56920 56920 1050 1 VLEDSDLK Unmodified 917.47058 0.47057715 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 5 0 1 56.256 56.256 2 0.031393 18900 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.501 7.9361 98.794 60.56 115.97 0 67.99 0 93 65 111 0 65 0 1 1 1 0 1 0 8949.4 21186 1419 20390 49116 56921 56921 1 VLEDVGK Unmodified 758.41742 0.41741937 2133 Q61644 Pacsin1 Protein kinase C and casein kinase substrate in neurons protein 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 54.642 54.642 2;3 0.026917 18454 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.942 3.8784 333.33 276.73 485.02 166.13 358.58 514.24 314 287 472 166 361 492 3 3 4 2 3 4 113500 21187 2133 20391 49117;49118;49119;49120 56922;56923;56924;56925;56926 56923 5 VLEEANQAINPK Deamidation (N) 1325.6827 0.68269519 1963 Q501J6;Q3U741 Ddx17 Probable ATP-dependent RNA helicase DDX17 yes no 0 1 0 0 5 0 1 59.839 59.839 3 4.7357E-05 20691 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.92 57.628 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21188 1963 20392 49121 56927 56927 788 1 VLEEELLALK Unmodified 1155.6751 0.67509062 2621 Q8QZS1;E0CX19 Hibch 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 84.726 84.726 2 3.26E-05 32285 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.247 22.122 0 0 60.592 0 47.467 18.9 0 0 56 0 46 19 0 0 1 0 1 1 3372.1 21189 2621 20393 49122;49123 56928;56929 56928 2 VLEELGQR Unmodified 942.51345 0.51344502 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 5 0 1 55.714 55.714 2 0.021985 18671 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.072 30.259 87.978 110.7 87.931 125.92 0 138.58 83 111 93 120 0 130 1 1 1 1 0 1 14557 21190 2137 20394 49124 56930 56930 1 VLEEMEAR Unmodified 975.46953 0.46953129 2571;1283 O88951;Q8JZS0;Q3TUM0 Lin7b;Lin7a Protein lin-7 homolog B;Protein lin-7 homolog A no no 0 0 0 0 3 0 1 54.055 54.055 2 0.032377 18538 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 70.919 40.357 0 98.952 0 60.018 63.245 57.891 0 93 0 56 65 56 0 1 0 1 1 1 6864.5 21191 1283;2571 20395 49125 56931 56931 1 VLEEMESR Unmodified 991.46445 0.46444592 1284 O88952 Lin7c Protein lin-7 homolog C yes yes 0 0 0 0 4 0 1 53.001 53.001 2 0.01151 17682 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.143 31.144 59.741 0 58.268 45.419 73.706 46.933 56 0 56 46 74 46 1 0 1 1 1 1 5990.1 21192 1284 20396 49126 56932 56932 1 VLEEQINEGEQQLK Unmodified 1655.8366 0.83662965 2771 Q91YJ2 Snx4 Sorting nexin-4 yes yes 0 0 0 0 4 0 1 64.897 64.897 3 4.9568E-08 23095 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 114.74 86.11 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 3798 21193 2771 20397 49127 56933 56933 1 VLEESELAR Unmodified 1044.5451 0.54513908 2255 Q6R891 Ppp1r9b Neurabin-2 yes yes 0 0 0 0 6.67 4.5 1 1 1 51.668 51.668 2 0.00072766 17161 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.89 65.487 118.06 155.34 360.09 243.7 357.98 245.63 111 157 352 241 361 240 1 2 3 2 3 3 33273 21194 2255 20398 49128;49129;49130 56934;56935;56936 56935 3 VLEFIAVSQLR Unmodified 1273.7394 0.73942221 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 84.084 84.084 2;3 0.014395 26252 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.743 30.534 69.456 0 76.626 17.869 0 0 65 0 74 19 0 0 1 0 2 1 0 0 6418.9 21195 2539 20399 49131;49132 56937;56938 56938 2 VLELDNVK Unmodified 928.52295 0.52294707 2272 Q76MZ3;G3UWL2 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes no 0 0 0 0 8.67 3.09 1 1 1 63.282 63.282 2;3 0.0024441 22520 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.296 55.499 295.41 271.61 254.99 250.59 222.99 96.188 278 278 251 240 222 93 3 3 2 2 2 1 71400 21196 2272 20400 49133;49134;49135 56939;56940;56941 56941 3 VLELDPALAPVVSR Unmodified 1477.8504 0.85042922 1169 O08915 Aip AH receptor-interacting protein yes yes 0 0 0 0 6.5 0.5 1 1 79.592 79.592 2 0.0055696 28384 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.225 26.241 0 20.216 0 30.079 27.906 0 0 19 0 28 28 0 0 1 0 1 1 0 1522.3 21197 1169 20401 49136;49137 56942;56943 56943 2 VLELLLPIR Unmodified 1064.6958 0.69576648 552 A3KMP2 Ttc38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 0 12 0 1 92.07 92.07 2 0.055881 26258 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.712 31.883 29.813 17.81 23.667 0 24.058 0 28 19 23 0 23 0 1 1 1 0 1 0 1980.6 21198 552 20402 49138 56944 56944 1 VLELVSITANK Unmodified 1185.6969 0.69688869 3005 Q9CZN7 Shmt2 Serine hydroxymethyltransferase yes yes 0 0 0 0 10 0 1 79.135 79.135 2 0.0022905 24615 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.017 49.595 29.822 0 37.302 57.951 54.943 28.28 28 0 37 56 56 28 1 0 1 1 1 1 1720.8 21199 3005 20403 49139 56945 56945 1 VLENAEGAR Unmodified 957.48796 0.48795855 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 6.25 3.96 1 1 1 1 39.437 39.437 2 0.00064136 11350 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 120.33 51.911 275.47 195.04 244.77 113.76 270.2 173.21 259 195 243 111 269 167 2 1 2 1 2 1 47912 21200 1533 20404 49140;49141;49142;49143 56946;56947;56948;56949 56947 4 VLENHAR Unmodified 837.4457 0.4456998 2001 Q3UPL0 Sec31a Protein transport protein Sec31A yes yes 0 0 0 0 5 0 1 26.123 26.123 3 0.008602 4701 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.178 42.545 39.476 0 37.741 46.998 54.787 47.473 37 0 37 46 56 46 1 0 1 1 1 1 2402.1 21201 2001 20405 49144 56950 56950 1 VLEPYPSK Unmodified 931.50148 0.50148335 2434 Q8BMJ2 Lars Leucine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 7 0 1 55.402 55.402 2 0.0059567 17057 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.01 63.101 48.795 34.991 64.992 67.171 0 49.036 46 37 65 65 0 46 1 1 1 1 0 1 2408 21202 2434 20406 49145 56951 56951 1 VLEQLTGQTPVFSK Unmodified 1545.8403 0.84025847 855 E9PZB3;E9PYL9;Q9CXW4;A2BH06 Gm5093;Gm10036;Rpl11 60S ribosomal protein L11 yes no 0 0 0 0 8 0 1 76.818 76.818 3 0.00069247 26500 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 63.894 41.361 0 58.467 66.822 0 97.278 0 0 56 65 0 93 0 0 1 1 0 1 0 8856.4 21203 855 20407 49146 56952 56952 1 VLESEEGRR Unmodified 1073.5465 0.54653606 3222 Q9JJY3 Smpd3 Sphingomyelin phosphodiesterase 3 yes yes 0 0 0 1 3 0 1 31.092 31.092 3 0.03453 7889 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.916 10.025 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21204 3222 20408 49147 56953 56953 1 VLESINVQMDENTLHEILCEVDLNK Unmodified 2954.4365 0.43652319 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 6 0 1 99.027 99.027 4 1.6287E-11 37029 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.779 55.173 0 19.83 23.092 13.573 18.756 14.389 0 19 23 14 19 14 0 1 1 1 1 1 1291 21205 2179 20409 49148 56954 56954 1 VLETAEDIQER Unmodified 1301.6463 0.64630969 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447;A3KGU4 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 4.57 3.58 2 2 1 1 1 55.953 55.953 2;3 1.0051E-10 18940 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.25 107.06 256.36 499.82 381.77 153.91 481.67 269.68 242 492 382 149 472 260 5 10 8 5 9 5 337300 21206 551 20410 49149;49150;49151;49152;49153;49154;49155 56955;56956;56957;56958;56959;56960;56961;56962;56963;56964;56965 56956 11 VLETENNFEEGQEPSATR Deamidation (N) 2049.9127 0.91270772 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;B1ARU1;F6Q750 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 1 0 0 1.5 0.5 1 1 56.785 56.785 3 5.171E-44 19273 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.42 113.09 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21207 581 20411 49156;49157 56966;56967 56967 170 2 VLETTVEIFNK Unmodified 1291.7024 0.702368 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 10 2.16 1 1 1 79.865 79.865 2;3 0.00013146 30704 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 92.538 47.774 78.838 38.751 131.79 113.67 47.304 29.848 74 37 129 112 46 28 2 1 3 3 1 1 12939 21208 3174 20412 49158;49159;49160 56968;56969;56970 56970 3 VLEVPPIVYLR Unmodified 1296.7806 0.78055874 852 E9PYH2;Q91V12 Acot7 Cytosolic acyl coenzyme A thioester hydrolase yes no 0 0 0 0 10.2 1.72 1 1 1 1 1 84.522 84.522 2 3.1889E-13 29449 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.36 97.576 183.51 246.91 118.53 113.63 262.55 261.45 176 242 121 112 260 251 3 5 2 3 4 4 159330 21209 852 20413 49161;49162;49163;49164;49165 56971;56972;56973;56974;56975;56976;56977;56978 56973 8 VLFCPVK Unmodified 861.47825 0.47824549 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 12 0 1 64.941 64.941 2 0.0086474 15851 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.05 76.699 0 65.181 110.72 74.283 0 99.138 0 63 109 74 0 93 0 1 1 1 0 1 8816.9 21210 3316 20414 49166 56979 56979 1 VLFGAAVR Unmodified 831.49667 0.49667274 1125 H7BWY8;Z4YL87;Q8C8T8;G3UWF3 Tsr2 Pre-rRNA-processing protein TSR2 homolog yes no 0 0 0 0 11.5 0.5 1 1 59.27 59.27 2 0.0129 15321 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.201 53.124 127.04 96.492 207.58 126.56 167.75 184.96 120 102 203 130 172 178 1 1 1 1 1 1 106770 21211 1125 20415 49167;49168 56980;56981 56980 2 VLFHFAR Unmodified 888.49701 0.49700709 2632 Q8R0H9 Gga1 ADP-ribosylation factor-binding protein GGA1 yes yes 0 0 0 0 6.5 5.5 1 1 55.518 55.518 3 0.0032522 12196 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.69 72.145 79.123 0 94.52 103.81 108.4 85.385 74 0 92 102 111 83 1 0 2 2 2 2 14895 21212 2632 20416 49169;49170 56982;56983 56983 2 VLFLGSLK Unmodified 875.54804 0.54803961 597 B1AVH5;Q8C0P5 Coro2a Coronin;Coronin-2A yes no 0 0 0 0 1 0 1 78.974 78.974 2 0.0080271 27501 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 103.92 33.92 99.139 51.806 65.396 102.62 89.833 79.519 93 56 68 99 93 77 1 1 1 1 1 1 7159.2 21213 597 20417 49171 56984 56984 1 VLFLIPK Unmodified 828.54731 0.54731133 2842 Q99KH8;A2AD84;Q99JT2;D3Z359;Q9Z2W1 Stk24;Stk26;Stk25 Serine/threonine-protein kinase 24;Serine/threonine-protein kinase 24 35 kDa subunit;Serine/threonine-protein kinase 24 12 kDa subunit;Serine/threonine-protein kinase 26;Serine/threonine-protein kinase 25 yes no 0 0 0 0 1 0 1 82.692 82.692 2 0.03739 29035 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.377 65.86 29.4 0 108.31 42.795 54.65 57.071 28 0 102 46 56 55 1 0 1 1 1 1 5300.4 21214 2842 20418 49172 56985 56985 1 VLFNITFDSVK Unmodified 1281.6969 0.69688869 1926 Q3TIR3 Ric8a Synembryn-A yes yes 0 0 0 0 11 0 1 85.712 85.712 3 0.014359 27077 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.559 30.123 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1945.1 21215 1926 20419 49173 56986 56986 1 VLFPGIEDHPVLR Unmodified 1490.8245 0.82454882 2317 Q80UG2;P70207 Plxna4;Plxna2 Plexin-A4;Plexin-A2 yes no 0 0 0 0 7 0 1 68.299 68.299 3 0.0023711 23203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.252 30.335 0 39.368 0 0 46.807 38.106 0 37 0 0 46 37 0 1 0 0 1 1 3440.5 21216 2317 20420 49174 56987 56987 1 VLFPGNAPQNK Unmodified 1183.635 0.63495714 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 58.243 58.243 2;3 2.4801E-08 15220 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.61 79.192 343.71 393.76 454.56 363.35 632.31 412.38 324 399 445 362 634 399 3 4 3 3 4 3 118480 21217 510 20421 49175;49176;49177;49178 56988;56989;56990;56991;56992;56993 56990 6 VLFPGNSTQYNILEGLEK Unmodified 2021.047 0.046956778 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 9.5 1.98 1 1 2 1 1 89.292 89.292 3;4 1.2398E-19 32019 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 132.64 107.32 183.5 187 254.91 303.59 183.3 158.97 172 185 253 290 184 153 6 5 5 7 4 4 78298 21218 1382 20422 49179;49180;49181;49182;49183;49184 56994;56995;56996;56997;56998;56999;57000;57001;57002;57003 56995 10 VLFPGNSTQYNILEGLEK Deamidation (N) 2022.031 0.030972363 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 1 0 0 8 0 1 93.886 93.886 3 0.00021729 34030 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.034 45.029 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2992.8 21219 1382 20422 49185 57004 57004 449 1 VLFTALNHGLK Unmodified 1211.7026 0.70264277 1884 Q04519 Smpd1 Sphingomyelin phosphodiesterase yes yes 0 0 0 0 1 0 1 68.333 68.333 3 0.00058957 23123 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 74.944 36.31 48.975 45.206 26.073 28.378 35.713 49.083 46 46 28 28 37 47 1 1 1 1 1 1 4264.1 21220 1884 20423 49186 57005 57005 1 VLFYCHFPDLLLTQR Unmodified 1920.992 0.99202486 3121 Q9DBE8 Alg2 Alpha-1,3/1,6-mannosyltransferase ALG2 yes yes 0 0 0 0 12 0 1 83.446 83.446 3 0.00017597 23134 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 68.283 57.907 0 0 0 0 59 0 0 0 0 0 59 0 0 0 0 0 1 0 18031 21221 3121 20424 49187 57006 57006 1 VLGAHILGPGAGEMVNEAALALEYGASCEDIAR Unmodified 3353.6384 0.6384109 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 0 0 0 6 0 1 93.721 93.721 4 9.2647E-10 35455 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.732 49.013 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 1540.2 21222 1164 20425 49188 57007 57007 1 VLGATLSPELIQK Unmodified 1367.8024 0.8024164 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 10 1.87 1 1 1 1 74.862 74.862 2;3 4.6785E-40 24877 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 189.58 99.476 81.077 215.53 82.305 48.711 189.77 104.63 76 209 79 46 187 102 2 4 1 1 3 2 55107 21223 1899 20426 49189;49190;49191;49192 57008;57009;57010;57011 57009 4 VLGDVIEVHGK Unmodified 1164.6503 0.65027285 1441 P23927;A0A1L1SRG5 Cryab Alpha-crystallin B chain yes no 0 0 0 0 7 0.816 1 1 1 59.389 59.389 3 0.00014681 18994 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.855 57.988 216.86 199.55 252.48 111.18 51.302 216 204 204 250 112 56 204 2 2 3 2 1 2 24875 21224 1441 20427 49193;49194;49195 57012;57013;57014 57013 3 VLGEEVSFPLTMGR Unmodified 1533.7861 0.78611441 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 8 0 1 80.505 80.505 2 0.015441 28284 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.998 17.924 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21225 2054 20428 49196 57015 57015 1 VLGENYTLEDEEDSQICTVGR Unmodified 2426.0907 0.09074844 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 4 0 1 68.467 68.467 3 0.043189 24576 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 29.452 19.664 0 0 49.772 0 0 39.442 0 0 46 0 0 37 0 0 1 0 0 1 2014.7 21226 464 20429 49197 57016 57016 1 VLGFCHYYLPEEQFPK Unmodified 2025.9659 0.96586969 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 9.73 2.14 2 2 2 1 1 1 2 74.08 74.08 3;4 2.2623E-12 24622 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.07 100.43 729.44 530.78 1258.2 1227.6 735.16 1290 686 548 1236 1202 740 1222 9 8 10 12 7 10 804530 21227 106 20430 49198;49199;49200;49201;49202;49203;49204;49205;49206;49207;49208 57017;57018;57019;57020;57021;57022;57023;57024;57025;57026;57027;57028;57029;57030 57024 14 VLGFCQLNLPSGK Unmodified 1431.7544 0.75442035 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 9.5 3.95 1 2 1 1 1 75.937 75.937 2;3 2.3644E-14 23067 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 133.89 107.45 336.26 569.95 417.27 156.35 543.17 482.85 316 566 408 158 542 466 5 8 6 3 7 6 378600 21228 2253 20431 49209;49210;49211;49212;49213;49214 57031;57032;57033;57034;57035;57036;57037;57038;57039 57032 9 VLGGSFADQK Unmodified 1020.524 0.52400971 1813 Q4FE56;P70398;F8VPU6 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 8 0 1 57.388 57.388 2 0.0021844 17366 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.345 27.585 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21229 1813 20432 49215 57040 57040 1 VLGILAMIDEGETDWK Unmodified 1788.8968 0.89678707 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 10 2.16 1 1 1 104.1 104.1 3 5.0093E-38 36694 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 154.65 129.72 8.5158 20.216 11.46 29.732 10.048 14 8 19 11 28 10 14 1 1 1 2 1 1 7461.3 21230 3085 20433 49216;49217;49218 57041;57042;57043 57042 3 VLGIYTFTK Unmodified 1040.5906 0.59063271 496 A2AN08 Ubr4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 0 12 0 1 75.351 75.351 2 0.0027847 19962 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.467 37.751 0 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 6985.1 21231 496 20434 49219 57044 57044 1 VLGLGLGGLR Unmodified 953.6022 0.60220045 387 A0A2R8VH99;Q8VHN8 Nudt16l1 Protein syndesmos yes no 0 0 0 0 12 0 1 72.036 72.036 2 2.5659E-05 18547 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.2 72.525 39.248 41.355 41.072 37.993 0 0 37 42 42 37 0 0 1 1 1 1 0 0 9856.1 21232 387 20435 49220 57045 57045 1 VLGLLGALDPYK Unmodified 1257.7333 0.7332742 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 12 0 1 93.631 93.631 2 2.424E-09 26941 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.87 70.87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21233 3243 20436 49221 57046 57046 1 VLGLSSPFTLGGFR Unmodified 1449.798 0.79799972 376 A0A2I3BPG4;Q920N2 Hlcs Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase yes no 0 0 0 0 1 0 1 86.911 86.911 2 0.00071079 30900 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.1 30.099 0 9.576 0 0 9.0934 9.3345 0 9 0 0 9 9 0 1 0 0 1 1 1496.6 21234 376 20437 49222 57047 57047 1 VLGLTLLQK Unmodified 983.63792 0.63791725 2897 Q9CPU0 Glo1 Lactoylglutathione lyase yes yes 0 0 0 0 6.75 5.76 2 1 1 79.906 79.906 2;3 4.1434E-08 27912 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 163.9 106.62 1517.5 956.6 1628 1345.8 1404.6 1693.8 1427 987 1617 1331 1445 1625 12 12 11 11 9 11 239600 21235 2897 20438 49223;49224;49225;49226 57048;57049;57050;57051;57052;57053;57054;57055;57056;57057;57058;57059;57060;57061 57051 14 VLGNLQLNLLSK Unmodified 1310.7922 0.79218606 439 A2AAN0;O35250 Exoc7 Exocyst complex component 7 yes no 0 0 0 0 12 0 1 83.481 83.481 3 3.2061E-08 23155 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.2 59.401 0 26.6 0 0 29.288 0 0 25 0 0 28 0 0 1 0 0 1 0 6543.5 21236 439 20439 49227 57062 57062 1 VLGPCSDILK Unmodified 1100.59 0.58998078 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 0 8 0 1 66.45 66.45 2 0.046067 21642 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.79 15.314 48.941 0 70.083 0 45.781 67.984 46 0 65 0 46 65 1 0 1 0 1 1 3039.2 21237 3119 20440 49228 57063 57063 1 VLGPSCK Unmodified 759.39491 0.39490979 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 11 2 1 1 44.979 44.979 2 0.040319 10969 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.116 44.016 0 106.35 130.1 221.88 168.8 0 0 102 130 213 167 0 0 1 1 2 1 0 24328 21238 3274 20441 49229;49230 57064;57065 57064 2 VLGPYTFSICDTSNFSDYIR Unmodified 2354.0889 0.088897947 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 90.029 90.029 3 3.0188E-39 35650 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 150.91 120.25 78.996 27.619 57.182 112.24 44.657 82.94 75 28 56 107 46 79 3 2 3 4 1 3 41418 21239 1876 20442 49231;49232;49233;49234;49235 57066;57067;57068;57069;57070;57071;57072 57072 7 VLGTAFDPFLGGK Unmodified 1320.7078 0.70778773 2137 Q61699;E9Q0U7;D3Z3I9 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 10 0.816 1 1 1 85.357 85.357 3 4.9241E-05 27245 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.64 72.654 0 57.792 0 80.197 110.42 39.442 0 56 0 74 111 37 0 2 0 2 2 1 71105 21240 2137 20443 49236;49237;49238 57073;57074;57075;57076;57077 57075 5 VLGTDELYGYLK Unmodified 1369.7129 0.71293269 271 A0A1D5RLE4;O54833;A0A1D5RM74;A0A1D5RM55 Csnk2a2 Casein kinase II subunit alpha' yes no 0 0 0 0 7.5 0.5 1 1 79.258 79.258 3 0.0016083 27674 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.274 36.076 89.79 33.897 28.75 57.172 65.364 0 84 38 28 55 65 0 2 2 1 2 2 0 6517.6 21241 271 20444 49239;49240 57078;57079 57079 2 VLGTEDLYDYIDK Unmodified 1542.7454 0.74535503 2083 Q60737 Csnk2a1 Casein kinase II subunit alpha yes yes 0 0 0 0 9 4 1 1 81.503 81.503 3 0.0015614 30912 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.098 19.299 80.358 0 19.583 89.426 64.782 40.508 75 0 19 84 65 38 2 0 1 2 1 1 7678.7 21242 2083 20445 49241;49242 57080;57081 57080 2 VLGVPIIVQASQAEK Unmodified 1550.9032 0.90319307 931 F7AA45;E9Q8F0;Q8VH51;B7ZD61 Rbm39 RNA-binding protein 39 yes no 0 0 0 0 9 0 1 77.608 77.608 3 0.00077561 26223 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.831 43.629 48.625 55.026 76.521 0 0 59.696 46 56 74 0 0 56 1 1 1 0 0 1 3304 21243 931 20446 49243 57082 57082 1 VLGVQRPLLQSTIIVEK Unmodified 1892.1459 0.14588296 1192 O35382 Exoc4 Exocyst complex component 4 yes yes 0 0 0 1 10.5 0.5 1 1 70.659 70.659 3 8.8267E-06 20895 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.694 86.67 29.807 0 39.884 0 38.702 0 28 0 37 0 37 0 1 0 1 0 1 0 7232.5 21244 1192 20447 49244;49245 57083;57084 57083 2 VLHEAEGHIVTCETNTGEVYR Unmodified 2413.1332 0.13322238 1724 P62320;A0A1W2P7K5 Snrpd3 Small nuclear ribonucleoprotein Sm D3 yes no 0 0 0 0 4 0 1 51.04 51.04 4 0.00047223 16793 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.735 38.754 50.288 28.427 0 20.234 57.647 0 47 28 0 19 56 0 2 1 0 1 2 0 5365.6 21245 1724 20448 49246 57085;57086 57085 2 VLHFWTLK Unmodified 1042.5964 0.59638679 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7;D3Z560 Kalrn Kalirin yes no 0 0 0 0 1 0 1 72.035 72.035 3 0.024089 24397 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 55.531 24.301 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21246 545 20449 49247 57087 57087 1 VLHFYNVK Unmodified 1018.56 0.56000128 366 G3X972;A0A286YDI8;A0A286YD08 Sec24c yes no 0 0 0 0 12 0 1 56.196 56.196 3 0.0029596 12700 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 84.244 41.12 99.522 52.873 0 101.65 0 93.808 93 56 0 93 0 88 1 1 0 1 0 1 7630.1 21247 366 20450 49248 57088 57088 1 VLHMLGYTPGTPYK Unmodified 1575.8119 0.81193523 1058 G3UWF0 Fam168b yes yes 0 0 0 0 12 0 1 65.991 65.991 3 0.0012884 16311 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.306 44.04 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21248 1058 20451 49249 57089 57089 1 VLIAAHGNSLR Unmodified 1149.6618 0.66184059 3126;1246 O70250;Q9DBJ1 Pgam2;Pgam1 Phosphoglycerate mutase 2;Phosphoglycerate mutase 1 no no 0 0 0 0 7.5 4.65 2 2 1 1 43.506 43.506 2;3 5.9158E-24 9096 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.99 110.35 467.67 209.52 193.48 155.17 183.87 103.63 458 213 193 153 186 100 5 3 3 2 3 1 1043200 21249 1246;3126 20452 49250;49251;49252;49253;49254;49255 57090;57091;57092;57093;57094;57095;57096;57097;57098 57092 9 VLIAAHGNSLR Deamidation (N) 1150.6459 0.64585618 3126;1246 O70250;Q9DBJ1 Pgam2;Pgam1 Phosphoglycerate mutase 2;Phosphoglycerate mutase 1 no no 0 1 0 0 9.33 1.25 1 1 1 47.655 47.655 3 2.8074E-08 12827 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 125.22 79.499 207.9 211.69 297.59 325.47 290.51 163.75 195 213 297 319 292 158 2 2 2 3 2 1 70994 21250 1246;3126 20452 49256;49257;49258 57099;57100;57101 57099 340 3 VLIEGSINSVR Deamidation (N) 1186.6558 0.65575216 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 1 0 0 6 0 1 61.017 61.017 2 0.014207 20567 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.389 36.592 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21251 1663 20453 49259 57102 57102 637 1 VLIEGSINSVR Unmodified 1185.6717 0.67173657 1663 P59999 Arpc4 Actin-related protein 2/3 complex subunit 4 yes yes 0 0 0 0 10 2.16 1 1 1 59.604 59.604 2;3 1.8109E-07 17748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.45 64.428 266.18 200.84 177.64 198.37 222.19 360.36 250 204 176 195 231 344 3 2 1 2 2 3 47052 21252 1663 20453 49260;49261;49262 57103;57104;57105 57104 3 VLIEILCTR Unmodified 1115.6373 0.63726532 372 Q07076;A0A2C9F2D2 Anxa7 Annexin A7 yes no 0 0 0 0 11.5 0.5 1 1 80.733 80.733 2 0.001896 22129 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.431 51.005 60.088 98.952 0 61.208 0 178.02 56 93 0 56 0 167 1 1 0 1 0 1 56399 21253 372 20454 49263;49264 57106;57107 57107 2 VLIFAYK Unmodified 852.51093 0.51092582 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 1 0 1 75.915 75.915 2 0.0062925 26272 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.42 76.802 117.86 61.228 157.57 201.21 134.93 134.73 111 65 157 195 139 130 2 1 2 3 1 2 7653.4 21254 2178 20455 49265 57108;57109;57110 57109 3 VLIFSQMTK Unmodified 1065.5893 0.5892525 576 F7C528;E9QAS4;E9QAS5;E9Q614;B1AR17;Q6PDQ2;F6V4V3;E9PYU4;E9PYL1;A2A8L1 Chd3;Chd4;Chd5 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5 yes no 0 0 0 0 1 0 1 74.676 74.676 2 0.0075235 25609 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.516 26.662 0 19.602 36.716 48.09 0 0 0 19 37 46 0 0 0 1 1 1 0 0 1080.4 21255 576 20456 49266 57111 57111 1 VLIIGGGDGGVLR Unmodified 1224.719 0.71902112 2181 Q64674 Srm Spermidine synthase yes yes 0 0 0 0 9.5 0.5 1 1 70.606 70.606 2 0.00045514 22908 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83 48.192 59.552 103.78 43.633 57.201 125.98 62.499 56 102 46 56 125 60 1 2 1 1 2 1 16494 21256 2181 20457 49267;49268 57112;57113 57112 2 VLILGSGGLSIGQAGEFDYSGSQAIK Unmodified 2566.3279 0.32788266 616 E9QAI5;G3UWN2;B2RQC6;E9QAT6 Cad CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase yes no 0 0 0 0 12 0 1 81.442 81.442 4 0.037521 22442 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 26.21 8.8404 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 1060.7 21257 616 20458 49269 57114 57114 1 VLIMHGGLFSEDGVTLDDIR Unmodified 2186.1042 0.10415408 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 8 0 1 80.902 80.902 3 3.4739E-07 28374 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.449 48.616 29.865 0 30.145 0 28.291 29.041 28 0 28 0 28 28 1 0 1 0 1 1 2815.3 21258 2080 20459 49270 57115 57115 1 VLINFNAPNPQDR Unmodified 1496.7736 0.77357588 281 A0A1D5RM83;E9PUA3;Q8R0S2 Iqsec1 IQ motif and SEC7 domain-containing protein 1 yes no 0 0 0 0 10 0 1 66.215 66.215 3 0.011806 18695 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 43.761 31.548 39.516 36.703 0 50.278 0 69.29 37 37 0 46 0 65 1 1 0 1 0 1 4204.1 21259 281 20460 49271 57116 57116 1 VLIPLHSVK Unmodified 1004.6383 0.6382516 2237 Q6PD28 Ppp2r5b yes yes 0 0 0 0 12 0 1 58.196 58.196 3 0.03371 13470 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.635 24.158 0 0 80.068 0 0 59.696 0 0 74 0 0 56 0 0 1 0 0 1 5433 21260 2237 20461 49272 57117 57117 1 VLIPLHTVR Unmodified 1046.66 0.66004968 2016 Q3UZJ4;Q61151 Ppp2r5e Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform yes no 0 0 0 0 11.5 0.5 1 1 53.469 53.469 3 0.00016705 11561 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.71 94.976 59.313 80.71 61.797 197.46 56.432 108.73 56 79 65 185 56 102 2 1 2 3 1 2 33548 21261 2016 20462 49273;49274 57118;57119;57120 57119 3 VLIPSYAAGSIIGK Unmodified 1387.8075 0.80750177 332 A0A1W2P872;D3YVV7;Q9JKN6 Nova2;Nova1 RNA-binding protein Nova-1 yes no 0 0 0 0 8.5 4.39 1 1 1 1 78.294 78.294 2;3 1.2733E-08 27351 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.467 48.065 25.752 28.508 147.15 34.614 158.45 0 24 28 139 37 153 0 1 1 2 1 3 0 17638 21262 332 20463 49275;49276;49277;49278 57121;57122;57123;57124 57121 4 VLIQVGYEPLPPTIGR Unmodified 1750.9982 0.99815609 2278 Q791V5;A2AFW6;Q9D050 Mtch2 Mitochondrial carrier homolog 2 yes no 0 0 0 0 9.5 0.5 1 1 79.748 79.748 3 1.4371E-05 27424 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.315 52.738 138.56 36.581 124.86 46.83 91.116 116.79 130 37 120 46 93 112 3 1 3 1 2 2 7838.1 21263 2278 20464 49279;49280 57125;57126;57127 57126 3 VLISDSLDPCCR Unmodified 1433.6643 0.66428471 2138 Q61753 Phgdh D-3-phosphoglycerate dehydrogenase yes yes 0 0 0 0 7 0 1 65.134 65.134 2 0.0063179 21616 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.184 47.293 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21264 2138 20465 49281 57128 57128 1 VLITGATGLLGR Unmodified 1169.7132 0.71320746 2858 Q99LB6;E0CYU5 Mat2b Methionine adenosyltransferase 2 subunit beta yes no 0 0 0 0 8.33 5.19 1 2 73.528 73.528 2;3 1.068E-11 19027 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.61 90.235 0 112.35 135.39 54.47 102.94 29.31 0 111 130 56 103 28 0 2 2 1 3 1 62630 21265 2858 20466 49282;49283;49284 57129;57130;57131;57132 57131 4 VLITTDLLAR Unmodified 1113.6758 0.67575932 1345;1679 P10630;Q8BTU6;E9Q561;P60843 Eif4a2;Eif4a1 Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-I no no 0 0 0 0 10 0.816 1 1 1 74.314 74.314 2 1.984E-15 24670 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 175.51 118.34 162.33 99.88 442.19 447.4 90.324 96.561 152 102 424 435 93 93 2 1 2 3 1 1 121820 21266 1345;1679 20467 49285;49286;49287 57133;57134;57135;57136 57133 4 VLIVGMK Unmodified 758.47243 0.47243183 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 11.5 0.5 1 1 66.525 66.525 2 0.027399 16451 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.151 33.19 0 178.68 195.25 112.79 247.48 135.52 0 171 195 111 246 130 0 2 2 1 2 1 44827 21267 3316 20468 49288;49289 57137;57138 57138 2 VLIWNLDIGEPVK Unmodified 1494.8446 0.84461556 2393 Q8BH44;G3UW48;G3UYG8 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 10.8 1.48 1 1 1 1 89.488 89.488 3 1.1106E-07 28962 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.51 72.589 58.648 76.961 145.4 55.036 120.35 76.786 55 74 139 56 120 74 2 2 3 2 3 2 15472 21268 2393 20469 49290;49291;49292;49293 57139;57140;57141;57142 57140 4 VLKDQPPNSVEGLLNALR Unmodified 1962.0898 0.089824645 2800 Q921M7 Fam49b Protein FAM49B yes yes 0 0 0 1 9 0 2 78.851 78.851 3;4 0.0077275 26828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.422 22.347 0 88.031 80.476 115.17 72.069 87.487 0 84 84 111 74 84 0 2 2 2 1 2 10547 21269 2800 20470 49294;49295 57143;57144 57144 2 VLKQVHPDTGISSK Unmodified 1507.8358 0.83584179 1349;1350;2541 Q8CBB6;Q8CGP2;Q8CGP1;Q64475;P10853;P70696;Q6ZWY9;Q64525;Q64478;P10854;Q8CGP0;Q9D2U9;Q64524 Hist1h2br;Hist1h2bp;Hist1h2bk;Hist1h2bb;Hist1h2bf;Hist1h2ba;Hist1h2bc;Hist2h2bb;Hist1h2bh;Hist1h2bm;Hist3h2bb;Hist3h2ba;Hist2h2be Histone H2B;Histone H2B type 1-P;Histone H2B type 1-K;Histone H2B type 1-B;Histone H2B type 1-F/J/L;Histone H2B type 1-A;Histone H2B type 1-C/E/G;Histone H2B type 2-B;Histone H2B type 1-H;Histone H2B type 1-M;Histone H2B type 3-B;Histone H2B type 3-A;Histone H2B type 2-E no no 0 0 0 1 11 0 1 46.833 46.833 4 0.0079188 10321 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.177 30.966 0 0 90 0 0 0 0 0 90 0 0 0 0 0 1 0 0 0 4180.7 21270 1349;1350;2541 20471 49296 57145 57145 1 VLLAAAVCTK Unmodified 1044.6002 0.60015154 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 8.33 5.19 1 2 66.428 66.428 2;3 0.0015179 22579 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.732 40.711 39.342 77.129 156.51 94.497 75.658 136.42 37 74 153 93 79 130 1 1 2 1 1 2 14280 21271 2073 20472 49297;49298;49299 57146;57147;57148 57146 3 VLLATLSIPITPER Unmodified 1521.913 0.91302948 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 4.67 5.19 2 1 87.03 87.03 2;3 0.00017694 30987 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.706 62.72 40.722 0 8.7335 40.657 48.224 29.848 38 0 9 38 47 28 2 0 1 2 2 1 11518 21272 1438 20473 49300;49301;49302 57149;57150;57151 57150 3 VLLCGPIGPK Unmodified 1052.6052 0.60523691 301 Q3UDS7;A0A1L1SSF2;Q8VDL4 Adpgk ADP-dependent glucokinase yes no 0 0 0 0 11 0 1 66.792 66.792 2 0.0027399 18586 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.189 38.794 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21273 301 20474 49303 57152 57152 1 VLLDLSAFLK Unmodified 1117.6747 0.67469669 3088 Q9D880 Timm50 Mitochondrial import inner membrane translocase subunit TIM50 yes yes 0 0 0 0 12 0 1 100.14 100.14 3 0.0010781 28438 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.294 42.402 9.657 0 0 6.558 0 0 9 0 0 6 0 0 1 0 0 1 0 0 1552.2 21274 3088 20475 49304 57153 57153 1 VLLEAAVR Unmodified 869.53345 0.53345218 1472 P28271;Q811J3 Aco1;Ireb2 Cytoplasmic aconitate hydratase;Iron-responsive element-binding protein 2 yes no 0 0 0 0 8 0 1 59.645 59.645 2 0.058357 18491 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.972 23.364 59.523 43.967 57.654 0 0 0 56 46 56 0 0 0 1 1 1 0 0 0 4537.8 21275 1472 20476 49305 57154 57154 1 VLLENQITHFR Unmodified 1368.7514 0.75138388 2301;365 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6 Cadps Calcium-dependent secretion activator 1 no no 0 0 0 0 8 0 1 59.941 59.941 3 1.4317E-10 18609 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.06 86.962 0 77.131 95.998 0 133.4 75.077 0 74 93 0 130 74 0 1 1 0 1 1 24368 21276 2301;365 20477 49306 57155 57155 1 VLLFQTQSPEEMQGWINK Unmodified 2147.0721 0.072125671 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7;Q8C0E9 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 9.33 0.471 2 1 86.427 86.427 3;4 4.3251E-07 30184 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.616 73.478 69.395 98.952 58.748 117.31 53.277 87.728 65 93 56 111 56 83 2 2 1 3 2 1 16235 21277 814 20478 49307;49308;49309 57156;57157;57158;57159 57156 4 VLLGEEEALEDDSESR Unmodified 1789.8218 0.82176745 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 2 0 1 68.197 68.197 3 0.00041255 24653 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 59.862 44.323 9.657 0 0 20.767 0 9.594 9 0 0 19 0 9 1 0 0 1 0 1 2487.6 21278 1083 20479 49310 57160 57160 1 VLLGGISGLTGGFVGTPADLVNVR Unmodified 2311.29 0.28998102 3289 Q9QZD8 Slc25a10 Mitochondrial dicarboxylate carrier yes yes 0 0 0 0 6.5 5.5 1 1 96.424 96.424 3 1.4953E-35 33452 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 139.7 126.7 4 0 0 9.6683 8.9699 0 4 0 0 9 9 0 1 0 0 1 1 0 5719.3 21279 3289 20480 49311;49312 57161;57162 57161 2 VLLGGPGSFYWQGQLISDQVAEIISK Unmodified 2804.4749 0.47488125 1547 P43406 Itgav Integrin alpha-V;Integrin alpha-V heavy chain;Integrin alpha-V light chain yes yes 0 0 0 0 10 0 1 108.81 108.81 4 1.3957E-16 33991 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.656 55.76 0 6.384 0 0 8.368 0 0 6 0 0 8 0 0 1 0 0 1 0 1313.9 21280 1547 20481 49313 57163 57163 1 VLLGLSEPIFQVPR Unmodified 1566.9134 0.91336383 2357 Q811U4;F6XRI9 Mfn1 Mitofusin-1 yes no 0 0 0 0 11 0 1 89.27 89.27 3 0.00011128 28516 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.03 54.677 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21281 2357 20482 49314 57164 57164 1 VLLHFIQK Unmodified 996.61204 0.61203685 3113 Q9DB60 Fam213b Prostamide/prostaglandin F synthase yes yes 0 0 0 0 1 0 1 67.639 67.639 3 0.0029596 22747 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 84.244 56.94 0 38.93 105.14 64.779 0 49.036 0 37 102 65 0 46 0 1 2 2 0 1 16578 21282 3113 20483 49315 57165;57166 57165 2 VLLHHLDVK Unmodified 1072.6393 0.63931423 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;F6UIL7 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 9 0 1 50.034 50.034 4 0.0025475 13162 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.954 41.555 0 0 70.33 0 77.404 0 0 0 65 0 74 0 0 0 1 0 1 0 7733.5 21283 456 20484 49316 57167 57167 1 VLLISGFPVQVCK Unmodified 1458.8269 0.82685701 96 A0A0G2JFB2;Q80VL1;A0A0G2JE08 Tdrkh Tudor and KH domain-containing protein yes no 0 0 0 0 6.5 5.5 1 1 85.093 85.093 3 7.5614E-05 30143 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.82 57.287 0 50.008 0 60.183 54.474 38.94 0 47 0 56 56 37 0 2 0 2 2 1 3827.5 21284 96 20485 49317;49318 57168;57169 57168 2 VLLLHLEEGK Unmodified 1149.6758 0.67575932 728 D3YZ62;D3Z4J3;Q99104;D6RFU0 Myo5a Unconventional myosin-Va yes no 0 0 0 0 12 0 1 41.762 41.762 4 0.029706 7139 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.19 20.445 171.6 174.03 226.49 151.28 188.58 215.28 162 178 226 154 194 207 1 1 1 1 1 1 11440 21285 728 20486 49319 57170 57170 1 VLLLHQLAK Unmodified 1033.6648 0.6648007 2409 Q8BHT6 B3galtl Beta-1,3-glucosyltransferase yes yes 0 0 0 0 1 0 1 62.75 62.75 3 0.0038318 20932 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.073 49.919 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21286 2409 20487 49320 57171 57171 1 VLLLSQDYGK Unmodified 1134.6285 0.62847478 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 10.6 1.32 2 2 2 1 1 69.873 69.873 2;3 9.7445E-09 20530 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 143.03 59.251 2363.6 1734.5 1818.5 1627.2 1657.1 2328.5 2220 1801 1820 1570 1673 2226 10 10 8 8 9 11 355170 21287 2148 20488 49321;49322;49323;49324;49325;49326;49327;49328 57172;57173;57174;57175;57176;57177;57178;57179;57180;57181;57182;57183;57184;57185 57179 14 VLLLSSPGLEEFYR Unmodified 1621.8716 0.87155859 2701 Q8VDP4 Ccar2 Cell cycle and apoptosis regulator protein 2 yes yes 0 0 0 0 11 0 1 86.425 86.425 3 0.0013802 27402 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.034 36.2 49.358 0 0 20.767 0 29.848 46 0 0 19 0 28 1 0 0 1 0 1 3533.4 21288 2701 20489 49329 57186 57186 1 VLLPEYGGTK Unmodified 1075.5914 0.59136099 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 63.634 63.634 2 2.7869E-09 22701 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 157.96 87.958 656.04 552.54 506.94 556.67 1070.2 592.01 616 560 497 546 1067 576 5 4 3 4 7 6 218260 21289 2175 20490 49330;49331;49332;49333;49334 57187;57188;57189;57190;57191;57192;57193 57193 7 VLLPGLQK Unmodified 866.55894 0.55893865 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 11.5 1.12 1 1 1 1 68.883 68.883 2 0.0010837 17361 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 145.87 29.516 1435.9 1086.7 1318.2 862.11 433.74 1381.7 1349 1133 1312 854 437 1304 5 6 6 5 2 5 338890 21290 1857 20491 49335;49336;49337;49338 57194;57195;57196;57197;57198;57199;57200 57198 7 VLLPLHK Unmodified 818.53781 0.53780928 2733;2102 Q60996;Q91V89 Ppp2r5c;Ppp2r5d Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform no no 0 0 0 0 8 4.97 1 1 1 57.968 57.968 3 0.0024229 13275 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 118.03 30.038 155.34 73.623 158.81 131.62 482.44 68.045 146 77 157 132 483 65 2 1 2 2 3 1 65178 21291 2102;2733 20492 49339;49340;49341 57201;57202;57203 57203 3 VLLPVWEAEGLGLR Unmodified 1550.8821 0.8820637 1961 Q3U487 Hectd3 E3 ubiquitin-protein ligase HECTD3 yes yes 0 0 0 0 9 0 1 90.045 90.045 2 0.032146 31828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.606 7.5876 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 787.39 21292 1961 20493 49342 57204 57204 1 VLLSALDR Unmodified 885.52837 0.5283668 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 10 0 1 66.035 66.035 2 0.0070934 18601 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.36 51.807 59.555 0 89.506 0 94.332 85.786 56 0 83 0 93 83 1 0 1 0 1 1 10262 21293 2804 20494 49343 57205 57205 1 VLLSICSLLCDPNPDDPLVPEIAR Unmodified 2705.3768 0.37682347 1746;88 P62838;A0A0G2JE32;A0A0G2JGL0;P61079 Ube2d2;Ube2d3 Ubiquitin-conjugating enzyme E2 D2;Ubiquitin-conjugating enzyme E2 D3 no no 0 0 0 0 10.8 1.48 1 1 1 1 104.23 104.23 3 7.6238E-17 36706 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.64 91.93 9.1718 9.3621 0 0 0 5 9 9 0 0 0 5 2 1 0 0 0 1 13641 21294 1746;88 20495 49344;49345;49346;49347 57206;57207;57208;57209 57206 4 VLLTTQGVDMISK Unmodified 1403.7694 0.76940171 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 74.28 74.28 2 0.00020592 22479 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.716 57.127 20.319 13.526 0 20.348 22.303 23.882 19 14 0 19 23 23 1 1 0 1 1 1 3243.1 21295 3204 20496 49348 57210 57210 1 VLLVIDEPHTDWAK Unmodified 1634.8668 0.86680757 1282 O88935 Syn1 Synapsin-1 yes yes 0 0 0 0 8.12 2.15 2 2 1 2 1 73.325 73.325 3;4 2.7247E-36 27343 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 178.58 145.85 1081.1 1491.5 978.51 1864.4 1459.6 1609.5 1014 1482 982 1770 1490 1536 8 10 5 9 7 8 409010 21296 1282 20497 49349;49350;49351;49352;49353;49354;49355;49356 57211;57212;57213;57214;57215;57216;57217;57218;57219;57220;57221;57222 57222 12 VLLVLELQGLQK Unmodified 1351.8439 0.84388728 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 11.5 0.5 1 1 91.982 91.982 3 9.9671E-05 29490 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 84.658 59.883 19.219 48.712 0 20.767 29.288 0 18 47 0 19 28 0 1 2 0 1 1 0 6603.8 21297 2408 20498 49357;49358 57223;57224 57223 2 VLLVPGPEK Unmodified 950.58007 0.58006802 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 10 2.16 1 1 1 65.011 65.011 2 0.0022921 23376 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.005 59.033 149.15 0 0 90.719 0 138.58 139 0 0 83 0 130 1 0 0 1 0 1 11556 21298 2162 20499 49359;49360;49361 57225;57226;57227 57227 3 VLLVPGPEKET Unmodified 1180.6703 0.67033959 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 1 10.5 2.5 1 1 65.307 65.307 3 0.00212 21195 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.977 48.846 88.091 150.95 34.731 0 161.03 123.32 83 148 37 0 158 120 2 2 1 0 2 2 12863 21299 2162 20500 49362;49363 57228;57229 57228 2 VLLVSTLQR Unmodified 1027.639 0.63897988 352 A0A1Y7VP50;Q3UH45 Tecpr2 yes no 0 0 0 0 1 0 1 65.17 65.17 2 7.2504E-18 21894 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 142.79 71.411 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21300 352 20501 49364 57230 57230 1 VLLVVDEPHTDWAK Unmodified 1620.8512 0.8511575 2173 Q64332 Syn2 Synapsin-2 yes yes 0 0 0 0 8.5 2.22 1 1 2 1 1 70.165 70.165 3;4 1.5974E-35 23438 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 172.57 134.06 616.51 1144.2 1290.5 1073.4 861.24 1351.2 579 1115 1293 1054 867 1284 5 7 8 8 7 7 325850 21301 2173 20502 49365;49366;49367;49368;49369;49370 57231;57232;57233;57234;57235;57236;57237;57238;57239;57240;57241 57237 11 VLMASTSYLPSQVTEMFNQGR Unmodified 2358.1348 0.13480228 2326 Q80W47;D3YWK1 Wipi2 WD repeat domain phosphoinositide-interacting protein 2 yes no 0 0 0 0 11 0 1 89.777 89.777 3 2.4733E-07 28725 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.784 55.191 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 3075.4 21302 2326 20503 49371 57242 57242 1 VLMEDDDLYSCVVENPISQVR Unmodified 2480.1563 0.15632559 2167 Q640R3 Hepacam Hepatocyte cell adhesion molecule yes yes 0 0 0 0 4.5 0.5 1 1 84.38 84.38 3 4.0457E-06 32006 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.712 45.287 9.4947 33.837 37.956 0 48.988 5.0663 9 33 37 0 47 5 1 3 3 0 3 1 3632.3 21303 2167 20504 49372;49373 57243;57244;57245 57243 3 VLMPSLSPTMEQGNIVK Deamidation (N) 1843.9424 0.94235705 2423 Q8BKZ9;A2AWH8 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 1 0 0 9 0 1 76.839 76.839 3 0.00077396 25829 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.828 29.27 49.225 26.473 0 0 0 0 46 28 0 0 0 0 1 1 0 0 0 0 3568.3 21304 2423 20505 49374 57246 57246 927 1 VLMPSLSPTMEQGNIVK Unmodified 1842.9583 0.95834147 2423 Q8BKZ9;A2AWH8 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes no 0 0 0 0 10 0 1 76.98 76.98 3 0.01831 23561 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 35.757 21.673 0 58.974 36.496 0 0 0 0 56 37 0 0 0 0 1 1 0 0 0 1939 21305 2423 20505 49375 57247 57247 1 VLNAFLK Unmodified 803.49052 0.49052473 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 11.5 0.5 1 1 72.026 72.026 2 0.01578 18551 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.75 51.785 0 199.67 85.487 129.7 149.71 96.926 0 189 83 120 152 93 0 2 1 1 2 1 23453 21306 305 20506 49376;49377 57248;57249 57249 2 VLNEAVGALMYHTITLTR Unmodified 2001.0717 0.07173174 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YUR5;A0A0J9YVI3 Ctbp1 C-terminal-binding protein 1 yes no 0 0 0 0 11.5 0.5 1 1 86.603 86.603 3 1.4951E-09 24425 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.39 91.643 0 0 28 0 0 28 0 0 28 0 0 28 0 0 1 0 0 1 30329 21307 114 20507 49378;49379 57250;57251 57251 2 VLNEECDQNWYK Unmodified 1596.6879 0.68785692 585 Q60631;B1AT92;B1AT95 Grb2 Growth factor receptor-bound protein 2 yes no 0 0 0 0 6 0 1 63.126 63.126 3 0.0001741 21589 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.435 42.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21308 585 20508 49380 57252 57252 1 VLNLNAGEILQMFGK Unmodified 1645.8862 0.8861628 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 12 0 1 100.26 100.26 3 5.9851E-05 28478 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 93.823 57.053 0 15.96 15.148 0 12.552 14.924 0 15 14 0 12 14 0 1 1 0 1 1 1710 21309 1221 20509 49381 57253;57254 57254 2 VLNNITNDLRLK Deamidation (N) 1412.7987 0.798728 253 A0A1B0GRS5;P30204 Msr1 Macrophage scavenger receptor types I and II yes no 0 1 0 1 10 0 1 73.352 73.352 3 0.0055411 22034 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.344 7.0351 39.188 46.584 46.779 0 0 0 37 47 46 0 0 0 1 1 1 0 0 0 50592 21310 253 20510 49382 57255 57255 80 1 VLNNMEIGTSLYDEEGAK Oxidation (M) 1997.9252 0.92518666 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 1 0 4 0 1 66.783 66.783 3 0.0025342 23935 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 47.397 37.34 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1845.2 21311 1334 20511 49383 57256 57256 70 1 VLNNMEIGTSLYDEEGAK Unmodified 1981.9303 0.93027204 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 5.5 0.5 2 2 74.035 74.035 3;4 7.5018E-36 27239 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 151.04 125.72 138.35 114.63 135.72 133.06 198.28 158.54 130 116 134 131 199 152 3 3 3 3 3 3 64283 21312 1334 20511 49384;49385;49386;49387 57257;57258;57259;57260 57257 4 VLNNVVIYLLGDEDPR Unmodified 1827.9731 0.97306355 1083 G3X9H5;P42859 Htt Huntingtin yes no 0 0 0 0 9 0 1 97.807 97.807 3 0.016595 35024 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.613 16.415 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1862.7 21313 1083 20512 49388 57261 57261 1 VLNQQLTNHIR Deamidation (N) 1335.7259 0.72589741 118;1534;960 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98 Dnm1;Dnm3 Dynamin-1;Dynamin-3 no no 0 1 0 0 8 1 1 1 47.518 47.518 3 0.0013254 14183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.799 55.342 2958.4 3016.4 3728.9 3780.7 97.455 4609.8 2792 3081 3783 3664 102 4327 2 2 2 2 1 2 55868 21314 118;1534;960 20513 49389;49390 57262;57263 57262 59;60 2 VLNQQLTNHIR Unmodified 1334.7419 0.74188183 118;1534;960 A0A0J9YUN4;A0A0J9YUE9;P39053;E9QLL2;Q8BZ98 Dnm1;Dnm3 Dynamin-1;Dynamin-3 no no 0 0 0 0 11 2 1 1 45.476 45.476 2;3 1.09E-33 11176 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 195.79 144.67 1843.4 1705.3 2193.7 1882.7 2376.2 34.112 1738 1754 2205 1883 2353 32 1 2 1 2 1 1 62771 21315 118;1534;960 20513 49391;49392 57264;57265 57264 2 VLNSQEALQPVHYEEK Unmodified 1882.9425 0.94249171 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 0 5 0 1 56.878 56.878 3 0.0010328 19258 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.495 29.926 0 0 38.357 37.649 26.889 19.487 0 0 37 37 28 19 0 0 1 1 1 1 2574.4 21316 2467 20514 49393 57266 57266 1 VLNTGSDVEEAVADALLLGDIR Unmodified 2269.1802 0.1801558 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 5 0 1 103.94 103.94 3 1.0451E-11 36212 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.513 53.68 0 3.1456 2.7738 6.3629 1.5816 6.3509 0 3 3 6 2 6 0 1 1 1 1 1 891.42 21317 934 20515 49394 57267 57267 1 VLNTNIDGR Unmodified 1000.5302 0.53015772 340 F6YVP7;A0A1Y7VKY1;P62270;S4R1N6 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 6 0 1 48.392 48.392 2 0.0013441 14592 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.19 34.406 39.701 0 0 59.981 65.235 0 37 0 0 56 65 0 1 0 0 1 1 0 6311.2 21318 340 20516 49395 57268 57268 1 VLPAQATEYAFAFIQVPQDEDAR Unmodified 2578.2704 0.27036779 2276 Q78PY7 Snd1 Staphylococcal nuclease domain-containing protein 1 yes yes 0 0 0 0 7 0 1 94.165 94.165 3 0.0032789 34805 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.669 30.58 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 2813.7 21319 2276 20517 49396 57269 57269 1 VLPDELQVSAAPPGPR Unmodified 1644.8835 0.88352026 195 G3UYZ1;A0A0R4J117;Q8R366 Igsf8 Immunoglobulin superfamily member 8 yes no 0 0 0 0 8 3.56 1 1 1 66.552 66.552 2;3 2.7491E-18 23148 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 134.18 109.06 50.116 28.427 28.873 28.553 168.42 144.2 47 28 28 28 167 139 2 1 1 1 3 2 30019 21320 195 20518 49397;49398;49399 57270;57271;57272 57271 3 VLPGLYLGNFIDAK Deamidation (N) 1519.8286 0.82863115 2667 Q8R4V2 Dusp15 Dual specificity protein phosphatase 15 yes yes 0 1 0 0 10 0 1 92.295 92.295 3 0.033067 29986 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.789 17.572 0 20.216 0 30.604 0 39.442 0 19 0 28 0 37 0 1 0 1 0 1 1104.4 21321 2667 20519 49400 57273 57273 962 1 VLPGVDALSNV Unmodified 1082.5972 0.59717465 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 84.498 84.498 2 9.8901E-08 30112 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.7 80.436 443.96 297.05 332.99 461.32 103.07 499.46 417 305 338 442 102 472 6 4 3 5 1 5 542590 21322 1334 20520 49401;49402;49403;49404 57274;57275;57276;57277;57278;57279;57280 57278 7 VLPPNWK Unmodified 852.48577 0.48577371 1718 P62301;Q921R2 Rps13 40S ribosomal protein S13 yes no 0 0 0 0 10 0 1 62.157 62.157 2 0.027264 17067 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.692 40.009 48.58 54.899 84.315 43.835 75.39 0 46 56 83 46 74 0 1 1 1 1 1 0 7464.2 21323 1718 20521 49405 57281 57281 1 VLPSAFNIPNR Unmodified 1226.6772 0.6771563 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10.7 1.7 1 1 1 67.827 67.827 2 2.6569E-05 19498 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.01 71.07 59.296 83.268 102.56 96.761 99.113 214.64 56 83 102 93 102 204 1 1 2 2 2 3 28521 21324 570 20522 49406;49407;49408 57282;57283;57284 57283 3 VLPSITTEILK Unmodified 1212.7329 0.73293985 1788 P67778;Q5SQG5 Phb Prohibitin yes no 0 0 0 0 10 1.87 1 1 1 1 80.361 80.361 2;3 2.8245E-11 25241 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 141.95 81.436 227.77 99.893 299.11 143.57 150.31 96.789 214 102 288 140 148 93 5 3 5 3 2 2 56746 21325 1788 20523 49409;49410;49411;49412 57285;57286;57287;57288;57289;57290 57289 6 VLPSIVNEVLK Unmodified 1209.7333 0.7332742 1179 O35129;F6QPR1;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 0 10 1.87 1 1 1 1 85.627 85.627 2 4.2882E-05 29858 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.55 48.699 160.47 120.98 126.74 18.534 48.116 49.036 153 121 125 19 46 46 3 2 2 1 1 1 21021 21326 1179 20524 49413;49414;49415;49416 57291;57292;57293;57294 57292 4 VLPSSLMLPK Unmodified 1083.6362 0.63620269 2665 Q8R4N0 Clybl Citrate lyase subunit beta-like protein, mitochondrial yes yes 0 0 0 0 11 0 1 75.242 75.242 3 0.0083768 22315 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.683 26.545 109.03 0 69.78 0 0 0 102 0 65 0 0 0 1 0 1 0 0 0 9024 21327 2665 20525 49417 57295 57295 1 VLPVPQK Unmodified 779.49052 0.49052473 654 CON__P02666 yes yes 0 0 0 0 10 0 1 56.774 56.774 2 0.036486 14597 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.1 38.1 59.097 122.65 62.673 0 75.794 46.873 56 120 65 0 74 46 1 1 1 0 1 1 7842.8 + 21328 654 20526 49418 57296 57296 1 VLPWLSPEVLQQNLQGYDAK Unmodified 2297.2056 0.20558268 2008 Q3UUJ4 Strada STE20-related kinase adapter protein alpha yes yes 0 0 0 0 9 0 1 94.715 94.715 3 0.00078793 33878 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 43.598 26.11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21329 2008 20527 49419 57297 57297 1 VLQAAAK Unmodified 699.42792 0.42792448 1151 K3W4T3;Q9Z1G4 Atp6v0a1 V-type proton ATPase subunit a;V-type proton ATPase 116 kDa subunit a isoform 1 yes no 0 0 0 0 9 0.816 1 1 1 46.148 46.148 2 0.0085677 12111 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.24 67.582 525.81 255.85 137.15 358.47 439.01 199.49 492 269 139 343 442 194 3 2 1 3 3 2 88172 21330 1151 20528 49420;49421;49422 57298;57299;57300 57298 3 VLQAAFK Unmodified 775.45922 0.4592246 2243 Q6PER3;D3Z6G3;A0A0J9YVB9 Mapre3 Microtubule-associated protein RP/EB family member 3 yes no 0 0 0 0 8.5 4.39 1 1 1 1 60.409 60.409 2 0.0085677 15654 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.24 54.01 534.65 373.17 429.73 279.08 768.05 197.05 501 380 431 278 753 194 3 3 3 2 4 1 170290 21331 2243 20529 49423;49424;49425;49426 57301;57302;57303;57304;57305 57303 5 VLQALEGLK Unmodified 969.58588 0.58588168 3013 Q9CZX8;D3YUT3;D3Z5R8;D3Z722;D3YUG3 Rps19 40S ribosomal protein S19 yes no 0 0 0 0 9.5 0.5 1 1 78.134 78.134 2 0.0082013 26470 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.662 38.04 250.51 180.19 303.87 0 355.94 143.6 236 190 292 0 345 139 2 2 2 0 2 1 18447 21332 3013 20530 49427;49428 57306;57307 57306 2 VLQATVVAVGSGGK Unmodified 1284.7402 0.74015049 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 10.2 3.31 1 1 2 2 2 2 65.14 65.14 2;3 6.7111E-41 18208 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 185.59 98.286 784.04 639.13 904.38 821.71 998.19 809.36 737 651 900 812 996 774 10 8 8 10 10 9 545350 21333 2175 20531 49429;49430;49431;49432;49433;49434;49435;49436;49437;49438 57308;57309;57310;57311;57312;57313;57314;57315;57316;57317;57318;57319;57320 57311 13 VLQCHKPVQASYFETLR Unmodified 2075.0622 0.062229686 1132 I1E4X7;Q9JI46;B2KF67;A0A338P6T6;A0A338P6L9 Nudt3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes no 0 0 0 1 10.7 1.7 1 1 1 56.199 56.199 4 4.9161E-06 16281 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.865 61.927 248.94 118.1 0 472.96 306.91 425.1 232 111 0 438 319 407 2 1 0 3 2 3 43461 21334 1132 20532 49439;49440;49441 57321;57322;57323 57321 3 VLQDLVMDILR Unmodified 1313.7377 0.73770765 3211 Q9JIF7 Copb1 Coatomer subunit beta yes yes 0 0 0 0 10 0 1 106.92 106.92 2 0.013216 33814 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.198 28.125 0 0 0 0 8.9835 12.536 0 0 0 0 9 12 0 0 0 0 1 1 501.74 21335 3211 20533 49442 57324 57324 1 VLQEDTLPDLHTK Unmodified 1507.7882 0.7882229 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 5 0 1 60.701 60.701 3 1.1124E-07 21090 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.5 48.74 73.601 86.541 0 64.587 52.769 82.708 69 86 0 60 56 79 1 1 0 1 1 1 11040 21336 1147 20534 49443 57325 57325 1 VLQEIHR Unmodified 893.5083 0.50830006 967 Q6NXK7;E9QN98;D3Z5I7 Dpp10 Inactive dipeptidyl peptidase 10 yes no 0 0 0 0 13 0 1 40.144 40.144 3 0.0088478 11516 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.116 20.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21337 967 20535 49444 57326 57326 1 VLQETILVEER Unmodified 1327.7347 0.73473076 3345;369 A0A286YDY4;A0A286YCY1;A0A286YCT6;Q9WV92;A7YY80;A0A286YD84 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed no no 0 0 0 0 7 3.54 1 1 1 1 66.625 66.625 2 5.2207E-09 23822 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 133.42 61.094 89.02 110.54 132.02 101.39 118.59 96.552 84 111 130 102 121 93 3 3 3 3 3 2 26335 21338 369;3345 20536 49445;49446;49447;49448 57327;57328;57329;57330 57328 4 VLQFDPGTK Unmodified 1003.5338 0.53384611 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 8 0 1 63.243 63.243 3 0.0068395 20043 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 59.153 24.432 39.407 26.687 26.787 38.365 25.501 58.968 37 28 28 37 28 56 1 1 1 1 1 1 3706 21339 468 20537 49449 57331 57331 1 VLQIIPYEFNR Unmodified 1390.7609 0.76088593 1408 P18052;Q91V35 Ptpra Receptor-type tyrosine-protein phosphatase alpha;Receptor-type tyrosine-protein phosphatase yes no 0 0 0 0 9.5 0.5 1 1 80.301 80.301 2 6.6653E-05 25175 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.813 60.086 0 48.944 30.296 29.934 93.945 57.015 0 46 28 28 93 56 0 1 1 1 2 2 10204 21340 1408 20538 49450;49451 57332;57333 57333 2 VLQIVTNRDDVQGYAAK Unmodified 1889.0007 0.0006752871 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 1 8.67 0.471 1 2 62.363 62.363 3;4 2.0227E-05 19682 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.641 63.504 88.891 130.13 218.61 135.84 162.82 163.78 83 130 213 139 167 158 1 2 2 2 2 2 88671 21341 1400 20539 49452;49453;49454 57334;57335;57336 57334 3 VLQLEDDSLDSK Unmodified 1360.6722 0.67219008 2204 Q6NVE8 Wdr44 WD repeat-containing protein 44 yes yes 0 0 0 0 5 0 1 68.108 68.108 3 0.010689 24468 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 47.189 20.091 39.469 0 39.037 17.924 27.466 29.064 37 0 37 19 28 28 1 0 1 1 1 1 2961.6 21342 2204 20540 49455 57337 57337 1 VLQLINDNTATALSYGVFR Unmodified 2094.111 0.11095402 3234 Q9JKR6;F6TRP3 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 0 11 0.816 1 1 1 92.843 92.843 3 8.9335E-08 29938 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.205 82.034 66.392 23.824 14.987 66.022 45.216 69.599 62 23 15 62 47 66 3 2 1 3 2 3 21980 21343 3234 20541 49456;49457;49458 57338;57339;57340;57341;57342 57340 5 VLQLTSWDEDAWASK Unmodified 1747.8417 0.84171503 2182 Q64727 Vcl Vinculin yes yes 0 0 0 0 7.5 0.5 1 1 84.252 84.252 3 2.8938E-05 30025 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.464 52.801 0 0 68.178 48.297 151.64 27.73 0 0 65 47 148 28 0 0 2 1 2 1 8072 21344 2182 20542 49459;49460 57343;57344 57344 2 VLQLYPSNK Unmodified 1060.5917 0.59169534 1491 P30416 Fkbp4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed yes yes 0 0 0 0 10.5 0.5 1 1 62.993 62.993 2 0.00080127 17313 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 115.7 82.858 93.681 0 124.86 101.11 156.02 134.13 88 0 120 102 158 130 1 0 1 1 1 1 15532 21345 1491 20543 49461;49462 57345;57346 57345 2 VLQPTIFPVVPR Unmodified 1364.818 0.81800688 735 D3Z041;P41216 Acsl1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 0 11.2 0.829 1 1 2 77.644 77.644 2;3 0.0004061 20944 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.963 40.656 35.368 37.996 0 49.416 75.134 69.29 33 37 0 46 74 65 2 2 0 1 2 2 20887 21346 735 20544 49463;49464;49465;49466 57347;57348;57349;57350 57349 4 VLQPVEGEVAILFK Unmodified 1540.8865 0.88648038 897 E9Q4G8;E9Q3Q6;Q61490;F6QH25 Alcam CD166 antigen yes no 0 0 0 0 9.25 2.28 1 1 1 1 91.05 91.05 3 8.8604E-05 36044 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 85.42 64.467 39.701 0 0 65.342 12.671 102.45 37 0 0 60 14 97 1 0 0 2 1 3 12047 21347 897 20545 49467;49468;49469;49470 57351;57352;57353;57354 57354 4 VLQSALAAIR Unmodified 1040.6342 0.63422886 2991 Q9CXY6 Ilf2 Interleukin enhancer-binding factor 2 yes yes 0 0 0 0 11.5 0.5 1 1 71.83 71.83 2 0.0055319 18481 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.197 48.06 79.08 63.828 0 199.07 166.41 96.304 74 65 0 185 171 93 1 1 0 2 2 1 52750 21348 2991 20546 49471;49472 57355;57356 57356 2 VLQTQLDTLR Unmodified 1185.6717 0.67173657 689 Q3TDT0;D3YUY7;Q9R1R2;D3Z7V9 Trim3 Tripartite motif-containing protein 3 yes no 0 0 0 0 7.5 0.5 1 1 61.17 61.17 2 0.011112 19786 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.906 27.812 33.06 40.331 0 42.995 38.548 38.342 31 40 0 40 40 37 1 1 0 1 1 1 5258.2 21349 689 20547 49473;49474 57357;57358 57357 2 VLQYYQESEKPEELGSVTVQK Unmodified 2453.2326 0.2325853 2278 Q791V5 Mtch2 Mitochondrial carrier homolog 2 yes yes 0 0 0 1 7 1 1 1 67.834 67.834 4 5.2505E-11 23732 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 96.544 79.828 177.43 143.66 174.02 154.79 56.948 165.74 167 149 176 148 56 157 3 3 3 2 1 3 14310 21350 2278 20548 49475;49476 57359;57360;57361 57359 3 VLSAPPHFHFGQTNR Unmodified 1706.8641 0.86412223 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 9.5 0.5 1 1 51.185 51.185 4 2.2229E-05 12060 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.879 54.215 176.51 221.83 148.2 250.56 155.7 264.21 166 222 148 240 157 250 2 3 1 3 2 2 21669 21351 3094 20549 49477;49478 57362;57363;57364 57363 3 VLSAVGSAQLLMSQK Unmodified 1530.844 0.84396364 609 B7ZNS2;B1AZP2;H3BJD4;I1E4X0;F6YMR0;E9PUF2 Dlgap4 Disks large-associated protein 4 yes no 0 0 0 0 8 4.97 1 1 1 78.662 78.662 3 2.7899E-05 27486 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.758 49.567 89.516 169.7 116.81 72.302 204.83 0 84 167 116 70 199 0 2 3 2 2 3 0 16814 21352 609 20550 49479;49480;49481 57365;57366;57367 57365 3 VLSGEDK Unmodified 746.38103 0.38103386 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 44.233 44.233 2 0.002353 11876 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 152.39 68.589 2838.6 2475.7 2500.5 2517.3 2961.1 3034.6 2671 2527 2515 2473 2967 2926 8 6 6 7 6 8 1174500 21353 2735 20551 49482;49483;49484;49485;49486 57368;57369;57370;57371;57372;57373;57374;57375 57372 8 VLSGEDKSNIK Unmodified 1188.635 0.63501672 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 0 0 1 8 0 1 48.219 48.219 3 0.046303 13027 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.361 10.944 114.15 130.62 0 174.38 142.61 0 107 130 0 162 144 0 1 1 0 1 1 0 12803 21354 2735 20552 49487 57376 57376 1 VLSGEDKSNIK Deamidation (N) 1189.619 0.6190323 2735 Q91VB8;P01942 haemaglobin alpha 2;Hba Hemoglobin subunit alpha yes no 0 1 0 1 8 0 1 48.054 48.054 4 0.051068 13035 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.004 23.212 68.751 52.906 122.18 92.883 78.894 106.48 65 56 120 93 83 102 1 1 1 1 1 1 4851.5 21355 2735 20552 49488 57377 57377 984 1 VLSGTLK Unmodified 716.44324 0.44324019 3100 Q9D9V3 Echdc1 Ethylmalonyl-CoA decarboxylase yes yes 0 0 0 0 10 0 1 54.416 54.416 2 0.037283 13453 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.462 17.315 74.252 62.631 91.084 0 104.08 75.914 70 65 88 0 102 74 1 1 1 0 1 1 6905.1 21356 3100 20553 49489 57378 57378 1 VLSHQDDTALLK Unmodified 1338.7143 0.71432967 823 E9PV12;G3X914;Q9D5V5 Cul5 Cullin-5 yes no 0 0 0 0 6 0 1 54.393 54.393 3 7.575E-10 17443 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.407 70.665 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21357 823 20554 49490 57379 57379 1 VLSIGDGIAR Unmodified 999.57129 0.57129425 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 9.29 2.37 1 1 1 1 1 1 1 61.159 61.159 2 1.0616E-29 19996 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 197.66 120.81 1400.2 1577.7 1552.7 1327 1505.9 1935.5 1318 1593 1548 1308 1536 1856 8 11 10 10 9 12 1090500 21358 1881 20555 49491;49492;49493;49494;49495;49496;49497 57380;57381;57382;57383;57384;57385;57386;57387;57388;57389;57390;57391;57392 57382 13 VLSIGEGGFWEGQVK Unmodified 1604.8199 0.81985737 732 D3YZU5;D3YZU4;D3YZU1 Shank1 SH3 and multiple ankyrin repeat domains protein 1 yes no 0 0 0 0 8 0 1 79.939 79.939 3 0.00034575 27992 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 65.472 43.599 0 0 40.034 0 0 78.884 0 0 37 0 0 74 0 0 1 0 0 1 2758.6 21359 732 20556 49498 57393 57393 1 VLSIQSHVVR Unmodified 1136.6666 0.66659162 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 6.67 4.03 1 1 1 46.382 46.382 3 2.2147E-29 11411 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 194.12 117.34 59.279 238.74 245.93 223.33 364.44 236.91 56 232 250 222 366 232 1 3 3 2 3 3 81083 21360 2587 20557 49499;49500;49501 57394;57395;57396 57395 3 VLSLETSVSELSSQLNESK Unmodified 2049.0477 0.047744639 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 7 0 1 86.319 86.319 3 0.0091667 31641 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 37.624 26.837 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21361 2424 20558 49502 57397 57397 1 VLSLLVQK Unmodified 898.58515 0.5851534 2347 Q80ZJ6 Zer1 Protein zer-1 homolog yes yes 0 0 0 0 1 0 1 77.954 77.954 2 0.0090948 27174 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.492 26.493 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21362 2347 20559 49503 57398 57398 1 VLSLQEEIAK Unmodified 1128.639 0.63903946 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8.67 3.09 1 1 1 67.555 67.555 2 3.329E-06 22787 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 116.77 65.498 0 48.944 0 40.441 0 49.036 0 46 0 37 0 46 0 1 0 1 0 1 3399.8 21363 728 20560 49504;49505;49506 57399;57400;57401 57400 3 VLSNEPAASAAEEEVEDDALVR Unmodified 2313.0972 0.097214027 2478 Q8BYA0 Tbcd Tubulin-specific chaperone D yes yes 0 0 0 0 2 0 1 71.99 71.99 3 3.0712E-16 26093 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 99.901 87.842 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3174.6 21364 2478 20561 49507 57402 57402 1 VLSPEAVR Unmodified 869.49707 0.49706667 789 D3Z7P3;D3Z7P4;F6U529 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 6.5 1.12 1 1 1 1 47.183 47.183 2 0.0012292 13982 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 138.33 77.21 108.07 352.09 333.76 238.88 246.57 145.66 102 343 335 241 251 139 2 3 2 2 2 1 46263 21365 789 20562 49508;49509;49510;49511 57403;57404;57405;57406 57404 4 VLSPELLFALAR Unmodified 1327.7864 0.7863724 266 A0A1B0GTA0;D3YWS7;F6SJM7;Q8R2K1 Fuom Fucose mutarotase yes no 0 0 0 0 11 0.816 1 1 1 94.605 94.605 2 0.0076317 27078 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 58.699 32.097 50.363 32.618 3.5924 35.855 0 65.026 47 32 5 33 0 61 2 2 1 2 0 3 13909 21366 266 20563 49512;49513;49514 57407;57408;57409 57409 3 VLSQMEK Unmodified 833.43169 0.43168922 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 9.25 2.28 1 1 1 1 52.563 52.563 2;3 1.0434E-06 14333 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 123.69 62.902 245.01 324.99 192.7 188.95 239.87 502.7 229 324 185 177 246 478 1 3 1 1 1 3 73292 21367 1311 20564 49515;49516;49517;49518 57410;57411;57412;57413 57412 4 VLSQQAAAVVK Unmodified 1112.6554 0.65535823 883 E9Q242;P54822 Adsl Adenylosuccinate lyase yes no 0 0 0 0 8.5 0.5 1 1 56.003 56.003 2 5.4566E-08 16724 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.61 54.483 39.701 29.152 38.285 0 83.532 95.688 37 28 37 0 83 92 1 1 1 0 2 2 5284.1 21368 883 20565 49519;49520 57414;57415 57414 2 VLSRPNAQELPSMYQR Unmodified 1887.9625 0.96251564 1179 O35129;F6QPR1;F6Q8V7 Phb2 Prohibitin-2 yes no 0 0 0 1 8 0 1 53.552 53.552 3 1.3926E-05 15546 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.049 55.761 59.738 0 58.889 31.466 0 0 56 0 56 32 0 0 1 0 1 1 0 0 9096.8 21369 1179 20566 49521 57416 57416 1 VLSSHLMHSSLPGLTR Unmodified 1733.9247 0.92467357 570 B0V2P5;Q8BPN8;F6RYL8 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 11 0 1 55.487 55.487 4 0.035586 13740 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.715 13.64 0 0 0 38.842 85.034 0 0 0 0 37 83 0 0 0 0 1 1 0 4336.7 21370 570 20567 49522 57417 57417 1 VLSSIEQK Unmodified 902.5073 0.50729701 1256 O70456 Sfn 14-3-3 protein sigma yes yes 0 0 0 0 7.17 3.53 1 1 1 2 1 54.113 54.113 2;3 2.3423E-06 16621 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 163.9 0 2636.4 2390.5 2776.8 2787.1 3372.9 3352.2 2479 2454 2764 2755 3457 3234 7 7 7 7 8 7 1049600 21371 1256 20568 49523;49524;49525;49526;49527;49528 57418;57419;57420;57421;57422;57423;57424;57425;57426 57422 9 VLSSLVTLNK Unmodified 1072.6492 0.64921022 3191 Q9ES28;A0A1B0GSX2 Arhgef7 Rho guanine nucleotide exchange factor 7 yes no 0 0 0 0 6.5 5.5 1 1 74.338 74.338 3 1.1497E-05 19399 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.29 58.231 29.645 104.31 132.55 38.297 0 108.73 28 102 130 37 0 102 1 2 2 1 0 1 11103 21372 3191 20569 49529;49530 57427;57428 57428 2 VLSSSEISVHWK Unmodified 1370.7194 0.71941505 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 9.5 0.5 1 1 62.761 62.761 3 0.023966 19148 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.684 18.448 79.004 0 66.945 67.055 0 59.696 74 0 65 65 0 56 1 0 1 1 0 1 10293 21373 1362 20570 49531;49532 57429;57430 57429 2 VLSSTTVLPR Unmodified 1071.6288 0.62880913 3360 Q9Z0P4;A0A1W2P831 Palm Paralemmin-1 yes no 0 0 0 0 8.5 0.5 1 1 57.27 57.27 2 4.016E-05 16560 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 119.07 75.821 87.943 150.2 144.2 60.191 120.16 154.34 83 149 139 65 120 148 1 2 1 1 1 2 17606 21374 3360 20571 49533;49534 57431;57432 57432 2 VLSVPESTPFTAVLK Unmodified 1586.892 0.89195969 701 H7BWZ1;D3YW97;P61961 Ufm1 Ubiquitin-fold modifier 1 yes no 0 0 0 0 9 0.816 1 1 1 83.416 83.416 3 1.0002E-05 29652 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.814 49.486 112.63 55.431 138.51 130.96 153.01 151.27 106 58 137 130 157 146 3 2 3 3 3 3 27206 21375 701 20572 49535;49536;49537 57433;57434;57435 57433 3 VLTCTDLEQGPNFFLDFENAQPTESEK Unmodified 3128.4285 0.42846092 2800 Q921M7;A0A2I3BRN5;A0A2I3BPH9 Fam49b Protein FAM49B yes no 0 0 0 0 5 0 1 92.655 92.655 4 0.0073963 34881 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 32.855 20.731 0 0 17.026 6.4254 11.211 0 0 0 16 7 11 0 0 0 1 1 1 0 878.07 21376 2800 20573 49538 57436 57436 1 VLTEIIASR Unmodified 1000.5917 0.59169534 1577 P48036 Anxa5 Annexin A5 yes yes 0 0 0 0 10.5 2.5 1 1 67.514 67.514 2 0.00095841 22225 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 109.48 56.308 0 177.69 80.068 229.49 292.73 184.71 0 167 74 213 296 178 0 1 1 1 2 1 48013 21377 1577 20574 49539;49540 57437;57438 57437 2 VLTFALSEEVRPQDTVSVIGGVAGGSK Unmodified 2715.4443 0.44430941 1899 Q11011;F6QYF8;E9Q039 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 1 10.5 2.5 1 1 82.922 82.922 4 9.8341E-12 32182 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 66.447 52.992 59.212 73.321 85.108 0 105.4 37.539 56 74 83 0 102 37 2 2 2 0 2 1 6907.3 21378 1899 20575 49541;49542 57439;57440 57440 2 VLTFPEYIASLSDSGTK Unmodified 1826.9302 0.93019569 2110 Q61137;A0A0A6YWE6 Astn1 Astrotactin-1 yes no 0 0 0 0 9 0 1 89.815 89.815 3 0.0015094 31697 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.09 17.008 39.468 46.283 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 0 4834.3 21379 2110 20576 49543 57441 57441 1 VLTGEYISK Unmodified 1008.5492 0.54916182 940 E9Q9C7;E9Q9C4;E9Q9C0;E9Q9C1;E9Q9C2;E9QK41;Q8K4G5;F6YHE5 Ablim1 Actin-binding LIM protein 1 yes no 0 0 0 0 9 0 1 59.955 59.955 2 0.019714 17884 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.305 31.227 0 24.472 0 0 42.289 47.829 0 23 0 0 42 46 0 1 0 0 1 1 2860.9 21380 940 20577 49544 57442 57442 1 VLTILEQIPGMVVVADK Unmodified 1824.0431 0.043057374 1914 Q3TCN2 Plbd2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 28 kDa form;Putative phospholipase B-like 2 40 kDa form;Putative phospholipase B-like 2 15 kDa form yes yes 0 0 0 0 10.5 0.5 1 1 104.25 104.25 3 8.9163E-05 34459 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.52 45.445 15.022 0 0 25.139 0 0 14 0 0 23 0 0 1 0 0 1 0 0 2506.2 21381 1914 20578 49545;49546 57443;57444 57444 2 VLTLSEDSPYETLHSFISNAVAPFFK Unmodified 2911.4644 0.46437615 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 12 0 1 107.01 107.01 4 0.027439 29512 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 28.505 8.9563 9.657 0 0 0 5.23 0 9 0 0 0 5 0 1 0 0 0 1 0 1702.8 21382 3204 20579 49547 57445 57445 1 VLTNYMFPQQPR Unmodified 1492.7497 0.74966932 82 B9EHV0;A0A0G2JDT9;A0A0G2JFZ5;E9Q6L9;Q80TE7 Lrrc7 Leucine-rich repeat-containing protein 7 yes no 0 0 0 0 11 0 1 69.414 69.414 3 0.0046978 19767 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.286 37.323 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4575.6 21383 82 20580 49548 57446 57446 1 VLTPDLYNK Unmodified 1061.5757 0.57571092 1320 P07310 Ckm Creatine kinase M-type yes yes 0 0 0 0 8 0 1 36.188 36.188 4 0.040242 7562 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.448 14.35 63.762 58.634 54.245 56.292 89.462 0 60 60 56 56 88 0 1 1 1 1 1 0 4243.8 21384 1320 20581 49549 57447 57447 1 VLTPEEQLADK Unmodified 1241.6503 0.65033243 1972 Q3UGC7;Q66JS6 Eif3j1;Eif3j2 Eukaryotic translation initiation factor 3 subunit J-A;Eukaryotic translation initiation factor 3 subunit J-B yes no 0 0 0 0 5 0 1 60.395 60.395 3 0.00096943 20937 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.153 48.373 49.225 26.473 0 40.441 0 0 46 28 0 37 0 0 1 1 0 1 0 0 4150.3 21385 1972 20582 49550 57448 57448 1 VLTPELYAELR Unmodified 1302.7184 0.71835242 1883 Q04447 Ckb Creatine kinase B-type yes yes 0 0 0 0 8.6 2.42 1 1 1 1 1 73.194 73.194 2;3 3.9666E-20 25590 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 174.41 87.092 1035.4 1143.5 1334.4 1008.8 1732.6 953 974 1156 1333 997 1732 924 8 10 10 7 11 8 802260 21386 1883 20583 49551;49552;49553;49554;49555 57449;57450;57451;57452;57453;57454;57455;57456;57457;57458;57459;57460 57452 12 VLTPTQVMNR Unmodified 1157.6227 0.62267789 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 10.5 2.5 1 1 55.085 55.085 2 0.0072549 16223 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.552 32.133 69.246 33.775 55.25 66.594 61.587 97.381 65 37 56 65 65 93 1 1 1 1 1 1 7564.6 21387 1806 20584 49556;49557 57461;57462 57461 2 VLTPTQVMNRPSSISWDGLDPGK Unmodified 2497.2635 0.26350827 1806 P70296;D3Z1V4;D6RHS6 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 1 10.2 2.08 1 2 2 1 2 3 73.719 73.719 3;4 5.1088E-18 27757 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 109.75 90.969 1321.9 1006.3 677.63 864.36 1373.2 1264.9 1239 1029 671 843 1389 1217 13 14 5 10 15 11 271540 21388 1806 20585 49558;49559;49560;49561;49562;49563;49564;49565;49566;49567;49568 57463;57464;57465;57466;57467;57468;57469;57470;57471;57472;57473;57474;57475;57476;57477;57478;57479;57480 57478 18 VLTQQHEDAK Unmodified 1167.5884 0.58840088 490 A7TU71;A2ALU4 Shroom2 Protein Shroom2 yes no 0 0 0 0 8 3.56 1 1 1 36.573 36.573 3 0.0027165 9566 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.344 35.301 79.755 95.575 179.54 106.77 204.89 104.51 75 93 176 111 204 102 2 2 3 3 3 2 21354 21389 490 20586 49569;49570;49571 57481;57482;57483 57481 3 VLTSGIFETK Unmodified 1093.6019 0.60192568 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 0 10 0 2 70.275 70.275 2;3 0.0062256 20646 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.327 43.009 109.45 58.687 53.687 195.09 207.93 172.09 102 56 56 185 213 167 1 1 1 2 2 2 11474 21390 1772 20587 49572;49573 57484;57485 57484 2 VLTTAGSYVR Unmodified 1065.5819 0.58185894 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 11 2 1 1 52.554 52.554 2 0.008182 14458 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.504 40.678 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21391 1436 20588 49574;49575 57486;57487 57486 2 VLTTGYWPTQSATPK Unmodified 1648.8461 0.84607213 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 9.67 0.471 1 2 68.731 68.731 2;3 0.00050068 19938 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.726 51.094 49.014 0 57.819 56.709 55.971 0 46 0 56 56 56 0 1 0 1 1 1 0 11706 21392 3245 20589 49576;49577;49578 57488;57489;57490 57490 3 VLTTTALSTVSSGAQR Unmodified 1590.8577 0.85769944 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 10 0 1 60.922 60.922 2 0.00012353 16491 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.23 61.509 20.387 0 0 30.604 0 9.594 19 0 0 28 0 9 1 0 0 1 0 1 3242 21393 934 20590 49579 57491 57491 1 VLVAFGQR Unmodified 888.51814 0.51813647 2025 Q3V493;Q9ES56 Trappc4 Trafficking protein particle complex subunit 4 yes no 0 0 0 0 12 0 1 60.443 60.443 2 0.015616 14370 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.287 52.784 113.54 108.4 122.55 126.15 168.84 123.1 107 111 125 125 171 120 1 1 1 1 1 1 13742 21394 2025 20591 49580 57492 57492 1 VLVALADGTLAIFHR Unmodified 1594.9195 0.91951184 917 E9Q6B6;E9Q6E0;J3QNR6;K3W4S4;Q9ESN9 Mapk8ip3 C-Jun-amino-terminal kinase-interacting protein 3 yes no 0 0 0 0 11.5 0.5 1 1 93.54 93.54 3 0.0002393 30222 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 67.234 54.874 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2649.7 21395 917 20592 49581;49582 57493;57494 57493 2 VLVDINNPEPLIQTAK Unmodified 1762.9829 0.98289996 1825 P80316;E0CZA1 Cct5 T-complex protein 1 subunit epsilon yes no 0 0 0 0 7.33 0.471 2 1 77.838 77.838 3;4 3.8938E-08 26975 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.52 92.567 148.02 120.85 120.82 136.47 35.26 167.42 139 121 120 130 37 158 3 3 3 3 1 3 32055 21396 1825 20593 49583;49584;49585 57495;57496;57497;57498 57498 4 VLVDQTTGLSR Unmodified 1187.651 0.65100113 1812 P70372 Elavl1 ELAV-like protein 1 yes yes 0 0 0 0 7 0.816 1 1 1 54.119 54.119 2 5.2016E-08 16441 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.69 90.738 39.516 95.721 33.856 99.631 0 96.696 37 93 37 93 0 93 1 2 1 2 0 2 13540 21397 1812 20594 49586;49587;49588 57499;57500;57501 57500 3 VLVFDIPAK Unmodified 1000.5957 0.59571809 3299 Q9R0D8;D3Z394 Wdr54 WD repeat-containing protein 54 yes no 0 0 0 0 9.5 0.5 1 1 78.534 78.534 2;3 0.035681 26652 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.981 29.408 0 108.53 28.544 110.37 26.812 167.66 0 102 28 103 28 158 0 1 1 2 1 2 5527.8 21398 3299 20595 49589;49590 57502;57503 57502 2 VLVFVMGK Unmodified 891.5252 0.52519568 3220 Q9JJV2 Pfn2 Profilin-2 yes yes 0 0 0 0 13 0 1 80.311 80.311 2 0.0010516 30961 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 146.21 98.364 157.07 144.04 169.91 200.36 198.95 0 148 148 174 196 199 0 1 1 1 1 1 0 29347 21399 3220 20596 49591 57504 57504 1 VLVGGGTGFIGTAVTQLLR Unmodified 1858.0676 0.06763264 2051 Q5M8N4;A0A2I3BRL7;A0A2I3BQD5 Sdr39u1 Epimerase family protein SDR39U1 yes no 0 0 0 0 1 0 1 95.24 95.24 3 5.1854E-06 33258 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 68.123 40.034 6.4006 0 6.2894 3.8234 9.2384 0 6 0 6 4 9 0 1 0 1 1 1 0 1288.6 21400 2051 20597 49592 57505 57505 1 VLVGGTK Unmodified 672.41703 0.41702544 761;3358 D3Z3M7;D3Z2Z1;F8WIA1;Q922J3;Q8C0S5;Q9Z0H8 Clip1;Clip2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 no no 0 0 0 0 10 0 1 47.909 47.909 2 0.035629 10840 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.784 29.101 78.338 86.586 105.5 105.2 0 123.66 74 88 107 102 0 116 1 1 1 1 0 1 15277 21401 761;3358 20598 49593 57506 57506 1 VLVHPPQDGEDEPELVQK Unmodified 2028.0164 0.016384931 1273 O88696 Clpp ATP-dependent Clp protease proteolytic subunit, mitochondrial yes yes 0 0 0 0 5 0 1 59.393 59.393 4 2.5313E-05 20544 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.335 49.257 39.129 45.341 57.674 0 76.124 37.27 37 46 56 0 74 37 1 1 1 0 1 1 3124.9 21402 1273 20599 49594 57507 57507 1 VLVIGAGGLGCELLK Unmodified 1497.8589 0.85888542 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 10 0 1 84.577 84.577 2 9.9185E-05 26956 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.143 57.831 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1437.2 21403 1929 20600 49595 57508 57508 1 VLVLDDTNHER Unmodified 1309.6626 0.66262845 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 7.67 3.86 1 1 1 48.087 48.087 3 2.2408E-09 15027 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 132.17 88.874 60.088 47.687 75.167 242.54 47.137 353.63 56 46 74 226 46 333 1 1 1 2 1 3 170470 21404 1390 20601 49596;49597;49598 57509;57510;57511 57511 3 VLVLDDTNHER Deamidation (N) 1310.6466 0.64664404 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 1 0 0 4.5 0.5 1 1 51.484 51.484 3 0.011686 16971 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.693 29.466 49.225 26.473 0 29.921 36.338 28.811 46 28 0 28 37 28 1 1 0 1 1 1 1997 21405 1390 20601 49599;49600 57512;57513 57512 460 2 VLVLDFVTPTPLGTR Unmodified 1626.9345 0.9344932 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 11 0.816 1 1 1 90.106 90.106 2 1.7184E-07 28845 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 114.86 79.198 11.803 9.576 0 84.97 17.58 6.396 11 9 0 80 19 6 1 1 0 3 1 1 9578.2 21406 3253 20602 49601;49602;49603 57514;57515;57516;57517 57515 4 VLVLEDR Unmodified 842.48617 0.48616764 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 8.67 3.09 1 1 1 56.609 56.609 2 0.012395 18581 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 117.93 45.7 207.4 298.08 236.07 343.37 347.4 450.6 195 297 241 333 362 432 2 3 2 3 3 3 60173 21407 510 20603 49604;49605;49606 57518;57519;57520 57518 3 VLVNDAQK Unmodified 885.49198 0.4919813 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 6 0 1 47.869 47.869 2 0.053925 14317 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.118 17.249 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21408 2151 20604 49607 57521 57521 1 VLVNSASAQK Unmodified 1015.5662 0.56620887 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 9 0 1 46.922 46.922 2 0.000164 11638 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.788 58.359 29.747 27.339 26.775 38.845 0 59.696 28 28 28 37 0 56 1 1 1 1 0 1 2967.9 21409 934 20605 49608 57522 57522 1 VLVSPTNPPGATSSCQK Unmodified 1741.8669 0.86688392 3387 Q9Z1Z0 Uso1 General vesicular transport factor p115 yes yes 0 0 0 0 9 0 1 53.987 53.987 3 0.00015835 15027 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.728 46.96 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 4654.9 21410 3387 20606 49609 57523 57523 1 VLVTTNVCAR Unmodified 1131.607 0.60702783 2134;2481 Q61655;Q8R3C7;Q8BZY3 Ddx19a;Ddx19b ATP-dependent RNA helicase DDX19A no no 0 0 0 0 9 0 1 50.391 50.391 2 0.017411 13296 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.398 29.324 48.898 35.278 47.409 0 76.454 27.666 46 37 46 0 74 28 1 1 1 0 1 1 4462.9 21411 2134;2481 20607 49610 57524 57524 1 VLVTVFR Unmodified 832.51707 0.51707383 2296 Q7TT37 Ikbkap Elongator complex protein 1 yes yes 0 0 0 0 12 0 1 66.573 66.573 2 0.027103 16492 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.401 73.541 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21412 2296 20608 49611 57525 57525 1 VLVVDQLSMR Unmodified 1158.6431 0.64307898 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 9.25 2.28 1 1 1 1 68.398 68.398 2 3.5625E-29 22605 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 196.79 149.98 383.92 243.14 550.46 396.72 283.23 530.25 362 250 537 389 292 505 4 3 3 3 2 3 138900 21413 1160 20609 49612;49613;49614;49615 57526;57527;57528;57529 57527 4 VLVVGAGGIGCELLK Unmodified 1483.8432 0.84323535 3375 Q9Z1F9 Uba2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 0 9.5 0.5 1 1 80.838 80.838 3 8.1667E-05 27792 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.412 67.495 0 58.673 54.49 57.96 0 0 0 56 56 56 0 0 0 1 1 1 0 0 4594 21414 3375 20610 49616;49617 57530;57531 57530 2 VLVVGSGIAGLGAAQK Unmodified 1438.8508 0.85076357 1942 Q3TXR6;Q8C0L6 Paox Peroxisomal N(1)-acetyl-spermine/spermidine oxidase yes no 0 0 0 0 12 0 1 73.302 73.302 3 3.5327E-08 18996 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 113.76 97.407 0 0 0 79.495 73.752 0 0 0 0 74 74 0 0 0 0 1 1 0 6505.2 21415 1942 20611 49618 57532 57532 1 VLVVHDGFEGLAK Unmodified 1382.7558 0.75580056 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 9.25 2.28 1 1 1 1 64.777 64.777 3 9.6847E-22 21598 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 158.42 135.19 356.38 269.95 245.66 426.07 278.36 380.87 334 278 241 408 278 361 3 3 2 4 2 3 107390 21416 1568 20612 49619;49620;49621;49622 57533;57534;57535;57536 57533 4 VLVVSAK Unmodified 714.46398 0.46397563 2385 Q8BGS2 Bola2 BolA-like protein 2 yes yes 0 0 0 0 11 0 1 54.621 54.621 2 0.027317 13444 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.262 22.995 0 0 233.57 197.57 261.84 0 0 0 224 198 259 0 0 0 1 1 1 0 17212 21417 2385 20613 49623 57537 57537 1 VLVWDLR Unmodified 899.52289 0.52288749 234 A0A140LHA2;Q9WVA3 Bub3 Mitotic checkpoint protein BUB3 yes no 0 0 0 0 9 0 1 73.862 73.862 2 0.02286 24379 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 103.71 24.115 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3600.5 21418 234 20614 49624 57538 57538 1 VLVYGGR Unmodified 762.43882 0.43882351 2464 Q8BVI4;A0A0G2JGJ1;D3Z099;D3Z1A1 Qdpr Dihydropteridine reductase yes no 0 0 0 0 10.8 1.48 1 1 1 1 48.191 48.191 2 2.5044E-26 10941 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 157.88 113.14 306.99 0 341.45 0 0 0 288 0 317 0 0 0 1 0 1 0 0 0 67043 21419 2464 20615 49625;49626;49627;49628 57539;57540;57541;57542 57540 4 VLYAYGYYTGDPSK Unmodified 1595.7508 0.75077476 2898 Q9CPU4 Mgst3 Microsomal glutathione S-transferase 3 yes yes 0 0 0 0 9 0 1 70.09 70.09 3 0.0064025 22673 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.481 28.024 148.38 0 129.09 0 0 157.77 139 0 120 0 0 148 1 0 1 0 0 1 6689.7 21420 2898 20616 49629 57543 57543 1 VLYAYGYYTGDPSKR Unmodified 1751.8519 0.85188578 2898 Q9CPU4 Mgst3 Microsomal glutathione S-transferase 3 yes yes 0 0 0 1 11.5 0.5 1 1 61.402 61.402 3 7.611E-12 14774 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.039 77.811 0 48.944 0 71.045 0 59.696 0 46 0 65 0 56 0 1 0 1 0 1 13983 21421 2898 20617 49630;49631 57544;57545 57545 2 VLYFGDHIYSDLADLTLK Unmodified 2082.0674 0.067357869 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 9 0 1 93.509 93.509 4 0.00010211 33397 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.234 37.156 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 1580.2 21422 1977 20618 49632 57546 57546 1 VLYPNDNFFEGK Unmodified 1441.6878 0.68778057 2555;3331;1969 Q8CI94;Q9WUB3;E9PUM3;Q3UEJ6;Q9ET01 Pygb;Pygm;Pygl Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form no no 0 0 0 0 8.6 2.42 1 1 1 1 1 74.291 74.291 2;3 6.5134E-05 25257 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.911 76.276 462.97 463.6 231.38 242.2 534.7 640.12 439 464 232 232 541 617 5 5 2 3 6 6 103090 21423 2555;3331;1969 20619 49633;49634;49635;49636;49637 57547;57548;57549;57550;57551;57552;57553;57554 57550 8 VMAGALEGDLFIGPK Unmodified 1516.796 0.79595081 2672 Q8R5C5;E0CZD4;E0CYB4 Actr1b Beta-centractin yes no 0 0 0 0 9.67 2.49 1 1 1 82.663 82.663 3 8.5949E-05 31833 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.087 0 59.87 68.541 73.683 97.257 29.288 39.442 56 65 74 93 28 37 1 2 2 2 1 1 8151.5 21424 2672 20620 49638;49639;49640 57555;57556;57557 57557 3 VMEALSLYTK Unmodified 1153.6053 0.60529649 1807 P70297;Q3UGN9 Stam Signal transducing adapter molecule 1 yes no 0 0 0 0 10 0 1 76.46 76.46 2 0.0015957 23343 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.827 58.454 48.708 25.036 88.058 0 64.649 97.293 46 28 83 0 65 93 1 1 1 0 1 1 3699.2 21425 1807 20621 49641 57558 57558 1 VMEHFIK Unmodified 902.46841 0.46840908 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 8 0 1 53.376 53.376 3 0.06348 15377 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.721 9.6213 0 87.266 62.589 56.248 65.406 0 0 83 65 56 65 0 0 1 1 1 1 0 6080.9 21426 1419 20622 49642 57559 57559 1 VMELESK Unmodified 834.4157 0.41570481 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 0 13 0 1 54.145 54.145 2 0.04867 18355 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.899 39.878 118.05 78.494 111.15 81.879 117.81 114.96 111 83 111 83 120 111 1 1 1 1 1 1 5406.6 21427 1760 20623 49643 57560 57560 1 VMEPILQILQQK Unmodified 1438.8218 0.82177163 240 A0A140T8I9;E9Q3L2 Pi4ka yes no 0 0 0 0 11.5 0.5 1 1 92.333 92.333 3 3.7918E-05 26443 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.82 65.154 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 5187.3 21428 240 20624 49644;49645 57561;57562 57562 2 VMEYINR Unmodified 923.45349 0.4534873 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 7.5 0.5 1 1 53.702 53.702 2 0.029762 15510 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.472 39.809 138.36 155.64 124.53 0 278.48 84.412 130 157 120 0 269 83 1 2 1 0 2 1 54946 21429 2185 20625 49646;49647 57563;57564 57564 2 VMGWVSGLGLK Unmodified 1145.6267 0.62670064 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 1 0 2 83.996 83.996 2;3 0.00053827 29526 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 77.379 42.993 79.891 37.886 66.054 35.923 83.537 47.488 75 37 65 37 83 46 2 1 2 1 2 1 4900 21430 1669 20626 49648;49649 57565;57566 57565 2 VMLALPSVR Unmodified 984.57902 0.57902216 1995 Q3UM45 Ppp1r7 Protein phosphatase 1 regulatory subunit 7 yes yes 0 0 0 0 12 0 1 69.146 69.146 2 0.020582 17465 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.419 30.526 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21431 1995 20627 49650 57567 57567 1 VMLGETNPADSKPGTIR Unmodified 1784.9091 0.90908309 866;1385 E9PZF0;Q01768;P15532;Q5NC80 Gm20390;Nme2;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A no no 0 0 0 1 10 2.16 1 1 1 54.033 54.033 3 4.065E-12 18083 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 121.45 96.279 69.114 176.67 423.47 158.07 204.73 241.47 65 176 408 167 209 232 1 2 3 2 1 1 53551 21432 866;1385 20628 49651;49652;49653 57568;57569;57570 57570 3 VMLPGQCHYLGLPVADYFK Unmodified 2207.0908 0.090752623 210 A0A0R4J1R9;Q8C460 Eri3 ERI1 exoribonuclease 3 yes no 0 0 0 0 10 0 1 82.11 82.11 3 2.9648E-05 26020 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.672 47.213 30.044 0 0 0 36.688 58.649 28 0 0 0 37 56 1 0 0 0 1 1 3685.5 21433 210 20629 49654 57571 57571 1 VMNILHR Unmodified 881.49054 0.49054151 2736 Q91VD9;A0A087WSU3 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 10.7 1.7 1 1 1 48.661 48.661 3 0.0011488 11196 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.96 44.226 187.63 114 124.99 47.393 19.874 108.73 176 121 121 47 19 102 3 4 2 2 1 2 26727 21434 2736 20630 49655;49656;49657 57572;57573;57574;57575 57573 4 VMNLISK Unmodified 803.45751 0.45751004 2856 Q99L47;F8WJK8 St13 Hsc70-interacting protein yes no 0 0 0 0 11.5 0.5 1 1 64.56 64.56 2 0.022688 15754 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 103.92 42.945 0 65.968 0 360.69 94.075 463.16 0 62 0 330 93 437 0 1 0 1 1 2 50982 21435 2856 20631 49658;49659 57576;57577 57577 2 VMQEEIFGPILPIVSVK Unmodified 1898.0587 0.058707438 586 B1ATI0;B1AV77;P47740 Aldh3a2 Aldehyde dehydrogenase;Fatty aldehyde dehydrogenase yes no 0 0 0 0 9 0 1 96.557 96.557 3 0.0010947 34549 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.848 36.682 0 0 9.0841 14.678 4.377 5.2051 0 0 9 14 5 5 0 0 1 1 1 1 1055.3 21436 586 20632 49660 57578 57578 1 VMSESPLVTNSK Unmodified 1290.649 0.64895222 3425 yes no 0 0 0 0 11 0 1 77.577 77.577 2 0.0072591 23396 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.978 18.626 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 8133.1 + 21437 3425 20633 49661 57579 57579 1 VMSQEIQEQLHK Unmodified 1468.7344 0.73441319 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0.816 1 1 1 56.159 56.159 3 0.00014841 18282 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.48 50.591 89.558 72.936 67.967 80.077 232.1 170.33 84 74 65 74 231 166 2 2 1 1 3 3 11162 21438 3204 20634 49662;49663;49664 57580;57581;57582 57581 3 VMVQPINLIFR Unmodified 1328.7639 0.76386282 1719 P62305;E9Q0W8;E9Q4F4 Snrpe Small nuclear ribonucleoprotein E yes no 0 0 0 0 7.6 5.43 2 1 1 1 85.277 85.277 2 6.2332E-10 23746 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 137.13 111.01 20.267 207.23 98.432 194.34 164.14 97.587 19 196 102 186 167 93 1 4 3 5 4 3 34227 21439 1719 20635 49665;49666;49667;49668;49669 57583;57584;57585;57586;57587 57586 5 VMVSISLK Unmodified 875.51502 0.51502492 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 11 0 1 68.623 68.623 2 0.0062124 19412 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 109.86 41.882 0 0 283.03 155.83 0 0 0 0 268 158 0 0 0 0 1 1 0 0 17717 21440 2971 20636 49670 57588 57588 1 VMYGFCSVK Unmodified 1089.4987 0.49872293 3267 Q9QXS6;A0A0R4J1E3 Dbn1 Drebrin yes no 0 0 0 0 10.3 0.471 2 1 64.115 64.115 2;3 0.00030318 17820 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 128.69 94.434 123.28 98.281 115.7 119.89 0 108.73 116 102 116 116 0 102 2 2 2 3 0 2 22194 21441 3267 20637 49671;49672;49673 57589;57590;57591 57589 3 VNADEVGGEALGR Deamidation (N) 1286.6103 0.61025853 562 A8DUK4;E9Q223 Hbbt1;Hbb-bs yes no 0 1 0 0 5.17 4.6 1 4 2 2 3 52.582 52.582 2;3 1.5739E-39 17281 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 196.11 154.31 352.96 457.88 557.7 432.55 555.7 645.85 333 454 557 426 564 620 7 7 10 8 7 9 126090 21442 562 20638 49674;49675;49676;49677;49678;49679;49680;49681;49682;49683;49684;49685 57592;57593;57594;57595;57596;57597;57598;57599;57600;57601;57602;57603 57594 163 12 VNADEVGGEALGR Unmodified 1285.6262 0.62624295 562 A8DUK4;E9Q223 Hbbt1;Hbb-bs yes no 0 0 0 0 4.86 3.44 1 2 2 1 1 50.102 50.102 2;3 3.1824E-60 16707 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 208.79 130.28 774.64 899.56 1202.7 1227.6 1451.9 1467 729 903 1202 1212 1468 1415 9 9 9 10 9 12 1803600 21443 562 20638 49686;49687;49688;49689;49690;49691;49692 57604;57605;57606;57607;57608;57609;57610;57611;57612;57613;57614;57615;57616 57606 13 VNAGDQPGADLGPLITPQAK Unmodified 1961.0218 0.02180466 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 6 0 1 69.601 69.601 4 0.052266 24523 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 27.904 9.7657 49.225 26.473 0 0 76.124 37.27 46 28 0 0 74 37 1 1 0 0 1 1 6654.4 21444 3170 20639 49693 57617 57617 1 VNAIEHVIIPR Unmodified 1259.735 0.73500553 1648 P57746 Atp6v1d V-type proton ATPase subunit D yes yes 0 0 0 0 9.25 2.28 1 1 1 1 59.378 59.378 3 3.0924E-08 19298 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.24 81.154 98.764 189.29 103.05 98.474 73.742 146.07 93 185 102 93 74 139 2 3 2 2 2 3 32376 21445 1648 20640 49694;49695;49696;49697 57618;57619;57620;57621;57622 57618 5 VNALQAELTEK Unmodified 1214.6507 0.65066678 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 6 0 1 64.61 64.61 3 0.00028992 22121 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 86.313 44.312 49.017 0 57.37 66.778 45.048 0 46 0 56 65 46 0 1 0 1 1 1 0 4010.8 21446 2249 20641 49698 57623 57623 1 VNAQAAAYEYMAAYIENAK Unmodified 2089.9779 0.97789093 1212 O35864;A0A087WQA8;A0A087WQ60 Cops5 COP9 signalosome complex subunit 5 yes no 0 0 0 0 8 0 1 88.076 88.076 4 1.4758E-05 31913 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.203 52.006 29.747 27.339 26.775 38.845 0 0 28 28 28 37 0 0 1 1 1 1 0 0 1106.9 21447 1212 20642 49699 57624 57624 1 VNASASSLK Unmodified 875.47125 0.47124585 2131 Q61553;A0A0G2JDU7 Fscn1 Fascin yes no 0 0 0 0 9.25 2.28 1 1 1 1 44.502 44.502 2;3 0.00093326 13433 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 110.47 58.687 186.94 289.68 337.88 75.414 467.33 184.16 176 288 327 74 453 176 1 3 3 2 3 2 27298 21448 2131 20643 49700;49701;49702;49703 57625;57626;57627;57628 57628 4 VNCLAPGLIK Unmodified 1083.6111 0.61105057 2857 Q99LB2;A0A2I3BRG8 Dhrs4 Dehydrogenase/reductase SDR family member 4 yes no 0 0 0 0 10 0 1 65.844 65.844 2 0.0021165 18557 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.308 41.677 59.91 35.328 0 69.851 63.489 37.63 56 37 0 65 65 37 1 1 0 1 1 1 4050.4 21449 2857 20644 49704 57629 57629 1 VNCSDNEFTQALTAAIPPESLTR Unmodified 2533.2119 0.21186663 2517 Q8CAQ8;E9Q800;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 8.67 3.09 1 1 1 82.44 82.44 3 3.7709E-15 30627 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.916 75.64 58.413 54.728 74.558 67.659 34.148 98.164 55 56 75 65 37 93 2 2 3 2 1 2 13654 21450 2517 20645 49705;49706;49707 57630;57631;57632 57630 3 VNDDGSEQLVYR Unmodified 1393.6474 0.64737232 1896 Q0VE82 Cpne7 Copine-7 yes yes 0 0 0 0 2.5 0.5 1 1 49.352 49.352 2 0.00015833 16340 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 90.434 67.114 29.692 57.115 27.932 20.767 0 20.254 28 56 28 19 0 19 1 2 1 1 0 1 5184.6 21451 1896 20646 49708;49709 57633;57634 57634 2 VNDDLISEFPDK Unmodified 1390.6616 0.6616254 767 D3Z3B8;H7BWY4;E9Q9H0;Q811D0 Dlg1 Disks large homolog 1 yes no 0 0 0 0 4 0 1 70.945 70.945 3 0.0020775 25748 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.482 34.284 30.044 0 0 0 48.116 0 28 0 0 0 46 0 1 0 0 0 1 0 3409.8 21452 767 20647 49710 57635 57635 1 VNDEHPAYLASDEITTVR Unmodified 2028.9752 0.9752484 1653 P58281;H7BX01 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 2.5 0.5 1 1 54.827 54.827 3 1.3039E-21 18757 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 100.46 80.067 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 1377 21453 1653 20648 49711;49712 57636;57637 57637 2 VNDSILFVNEVDVR Unmodified 1617.8362 0.83623572 407 A0A338P6E5;A0A338P6I6;Q62108;G3UZL5;A0A338P7H1;B1AR31;A0A338P6L4;A0A338P6H5;A0A338P713;E9Q3Z8;E9PXG2;J3QMR8;F6TPQ6;A0A338P746 Dlg4 Disks large homolog 4 yes no 0 0 0 0 5 0 1 75.796 75.796 2 0.0058909 28113 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 54.343 22.334 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21454 407 20649 49713 57638 57638 1 VNDSTMLGASGDYADFQYLK Unmodified 2193.9888 0.98884955 1864 P99026 Psmb4 Proteasome subunit beta type-4 yes yes 0 0 0 0 6 0 1 79.414 79.414 3 0.00030074 29181 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.559 25.271 48.682 55.185 66.774 0 58.576 0 46 56 65 0 56 0 1 1 1 0 1 0 4568.9 21455 1864 20650 49714 57639 57639 1 VNDVCTNGQDLIK Deamidation (N) 1475.6926 0.69260795 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 4.75 0.433 1 3 59.821 59.821 2;3 6.2119E-08 20711 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 94.191 63.937 48.805 44.732 55.082 57.925 0 59.696 46 46 56 56 0 56 1 1 1 1 0 1 9083.1 21456 551 20651 49715;49716;49717;49718 57640;57641;57642;57643 57643 157 4 VNDVCTNGQDLIK Unmodified 1474.7086 0.70859237 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 13 0 1 59.317 59.317 3 0.044543 20807 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 35.891 14.938 87.89 91.03 119.4 101.8 136.46 124.03 83 93 120 102 139 120 1 1 1 1 1 1 10934 21457 551 20651 49719 57644 57644 1 VNDVNKYDYVLTGYTR Unmodified 1918.9425 0.94249171 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 1 9.33 2.62 1 1 1 65.229 65.229 3 8.9634E-06 21061 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.347 62.948 187.9 96.739 258.05 127.88 234.74 190.51 177 102 250 129 232 185 3 2 3 2 2 3 31738 21458 2587 20652 49720;49721;49722 57645;57646;57647 57646 3 VNEDSGDTHGEDAVVILEK Unmodified 2025.9491 0.94909323 3103 Q9DAR7;Q3TBW9;D6RFQ0 Dcps m7GpppX diphosphatase yes no 0 0 0 0 3 0 1 60.336 60.336 3 4.0703E-05 21417 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 56.055 30.189 9.4847 0 28.962 28.878 0 20.254 9 0 28 28 0 19 1 0 1 1 0 1 2863.2 21459 3103 20653 49723 57648 57648 1 VNEGLEEINAFLTDHHK Unmodified 1964.9592 0.9592044 1080 G3X9A7;Q8BLJ3 Plcxd3 PI-PLC X domain-containing protein 3 yes no 0 0 0 0 7 0 1 75.767 75.767 4 0.0069916 26631 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 40.693 24.751 0 48.663 16.78 19.277 26.048 68.547 0 46 19 19 28 65 0 1 1 1 1 1 2656.5 21460 1080 20654 49724 57649 57649 1 VNELLLGILSPTR Unmodified 1423.8399 0.83986454 2347 Q80ZJ6 Zer1 Protein zer-1 homolog yes yes 0 0 0 0 12 0 1 91.609 91.609 2 0.0070599 26074 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.155 39.378 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1436.4 21461 2347 20655 49725 57650 57650 1 VNEMIIGGGMAFTFLK Unmodified 1726.8786 0.87863458 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 12.2 0.829 1 1 2 95.053 95.053 3 3.1415E-06 38072 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.805 57.932 40.087 74.984 82.865 26.587 0 54.366 38 76 80 28 0 51 2 4 2 1 0 2 8307.9 21462 1334 20656 49726;49727;49728;49729 57651;57652;57653;57654;57655 57654 5 VNETEVK Unmodified 817.41815 0.41814765 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 5 0 1 40.389 40.389 2 0.024672 11292 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 101.54 37.277 117.49 187.03 112.66 120.5 209.94 0 111 185 120 120 206 0 1 1 1 1 1 0 22812 21463 1424 20657 49730 57656 57656 1 VNEVDVSEVSHSK Unmodified 1427.6892 0.68923713 690 D3YUZ8;A0A338P6J0;Q91XM9;E9Q2L2 Dlg2 Disks large homolog 2 yes no 0 0 0 0 4 0 1 47.848 47.848 3 0.051506 15261 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 34.302 18.731 29.904 27.776 0 0 0 0 28 28 0 0 0 0 1 1 0 0 0 0 8214.6 21464 690 20658 49731 57657 57657 1 VNEVDVSEVVHSR Unmodified 1467.7318 0.73177065 538 Q52KF7;A2BEE9;P70175 Dlg3 Disks large homolog 3 yes no 0 0 0 0 4 0 1 51.877 51.877 3 6.2454E-14 17127 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 126.71 102.24 39.31 36.132 35.034 59.12 0 78.884 37 37 37 56 0 74 1 1 1 1 0 1 10037 21465 538 20659 49732 57658 57658 1 VNEVSQFAAK Unmodified 1091.5611 0.56112349 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 8.86 2.7 1 2 2 2 56.545 56.545 2;3 1.1455E-05 19230 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.79 87.276 730.37 690.15 577.75 419.14 851.21 877.73 686 704 571 412 861 842 6 8 4 3 8 6 199640 21466 551 20660 49733;49734;49735;49736;49737;49738;49739 57659;57660;57661;57662;57663;57664;57665;57666 57665 8 VNEVSQFAAK Deamidation (N) 1092.5451 0.54513908 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 6 0 1 60.294 60.294 3 0.0041499 20253 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.5 32.092 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21467 551 20660 49740 57667 57667 158 1 VNFDNVGLGYLSLLQVATFK Unmodified 2197.1783 0.1783053 111 A0A0J9YTW6;B1AWN6 Scn2a1 Sodium channel protein no no 0 0 0 0 11.5 0.5 2 2 106.46 106.46 3;4 3.1712E-11 29399 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.45 77.57 7.468 12.702 41.56 33.545 12.764 63.77 7 12 40 33 13 60 1 2 4 3 2 4 12444 21468 111 20661 49741;49742;49743;49744 57668;57669;57670;57671;57672;57673 57671 6 VNFLPEIITLSK Unmodified 1372.7966 0.79660274 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 91.724 91.724 3 0.00022101 29870 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.548 38.319 20.387 0 0 0 18.867 29.31 19 0 0 0 19 28 1 0 0 0 1 1 10920 21469 3204 20662 49745 57674;57675 57675 2 VNFTVDQIR Unmodified 1090.5771 0.57710791 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 9 2.94 1 1 1 59.509 59.509 2 0.001615 20711 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.02 54.135 334.88 207.64 346.98 418.67 466.57 413.09 315 213 351 410 478 400 3 2 3 3 3 3 46440 21470 1652 20663 49746;49747;49748 57676;57677;57678 57678 3 VNGDASPAAAEPGAK Deamidation (N) 1354.6365 0.63647328 1461 P26645 Marcks Myristoylated alanine-rich C-kinase substrate yes yes 0 1 0 0 3.33 0.471 2 1 45.244 45.244 3 4.8669E-05 14724 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.222 56.269 88.388 44.404 134.58 71.267 84.788 88.478 83 46 130 74 83 83 2 1 2 2 1 2 13944 21471 1461 20664 49749;49750;49751 57679;57680;57681 57680 541 3 VNGSLETK Unmodified 846.4447 0.44469675 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 6.5 0.5 1 1 43.456 43.456 2 0.012521 12271 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.047 35.08 265.98 194.42 217.46 0 93.306 204.14 250 203 213 0 93 194 2 2 2 0 1 2 15871 21472 978;2097 20665 49752;49753 57682;57683 57682 2 VNHEPEPASGASPGATIPK Unmodified 1857.9221 0.92209062 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 5 0.707 1 2 1 44.933 44.933 3;4 1.021E-07 13489 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.92 73.539 99.012 73.168 84.717 83.989 89.386 151.99 93 75 83 83 92 149 2 2 1 2 2 3 25077 21473 1157;2210 20666 49754;49755;49756;49757 57684;57685;57686;57687 57686 4 VNIHGGAVSLGHPIGMSGAR Unmodified 1929.0003 0.0002981316 2622 Q8QZT1 Acat1 Acetyl-CoA acetyltransferase, mitochondrial yes yes 0 0 0 0 9.33 1.25 1 1 1 49.306 49.306 4 9.0155E-11 12836 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.932 68.651 255.85 169.85 316.9 279.5 290.9 0 241 176 315 278 287 0 3 2 3 3 2 0 32435 21474 2622 20667 49758;49759;49760 57688;57689;57690 57689 3 VNIIGEVVDQGSTDLK Unmodified 1685.8836 0.88357984 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 7.75 3.11 1 1 1 1 80.23 80.23 3 2.4643E-12 29530 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 123.97 83.902 168.62 78.736 153.67 204.91 145.26 186.41 158 74 148 194 148 176 3 1 3 3 2 3 28187 21475 3274 20668 49761;49762;49763;49764 57691;57692;57693;57694 57692 4 VNIIPLIAK Unmodified 979.643 0.64300263 879 E9Q9F5;E9Q1G8;O55131;A0A0R4J233;S4R2P6;A0A1W2P6J7;Q9DA97;Q8C650 Sept7;Sept14;Sept10 Septin-7;Septin-14;Septin-10 yes no 0 0 0 0 8.2 5.15 5 1 3 3 3 78.3 78.3 2;3 1.8371E-05 23170 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 148.38 0 2985.3 2424.8 4195.2 3707.1 3392.9 4532.3 2802 2452 4156 3632 3465 4336 14 12 15 12 14 15 1309700 21476 879 20669 49765;49766;49767;49768;49769;49770;49771;49772;49773;49774;49775;49776;49777;49778;49779 57695;57696;57697;57698;57699;57700;57701;57702;57703;57704;57705;57706;57707;57708;57709;57710;57711;57712;57713;57714;57715;57716;57717 57706 23 VNIIPVIAK Unmodified 965.62735 0.62735256 3317 Q9R1T4 Sept6 Septin-6 yes yes 0 0 0 0 9.4 4.32 1 1 1 1 1 73.105 73.105 2;3 2.4569E-05 21395 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 145.63 33.462 1103.5 476.62 1138.8 1095 1175.4 180.95 1037 506 1129 1076 1173 171 4 1 3 2 3 2 199230 21477 3317 20670 49780;49781;49782;49783;49784 57718;57719;57720;57721;57722 57720 5 VNILFDFVK Unmodified 1093.6172 0.61718181 1661 P59325;Q8BVV6;A0A1Y7VKT5 Eif5 Eukaryotic translation initiation factor 5 yes no 0 0 0 0 11 0.816 1 1 1 91.289 91.289 2 3.0762E-05 29245 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 141.88 91.271 98.942 20.325 14.906 29.716 29.288 0 97 21 15 28 28 0 2 1 1 1 1 0 18288 21478 1661 20671 49785;49786;49787 57723;57724;57725 57724 3 VNILGEVVEK Unmodified 1098.6285 0.62847478 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 8.5 2.69 1 1 1 1 72.673 72.673 2;3 0.0026163 25379 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.65 26.139 116.5 172.01 180.2 152.43 266.04 212.03 111 167 176 148 268 204 3 3 3 3 4 3 37181 21479 3275 20672 49788;49789;49790;49791 57726;57727;57728;57729;57730 57728 5 VNIVPLIAK Unmodified 965.62735 0.62735256 410;3398 A0A338P6R8;A0A338P769;Q9Z2Q6;B7ZNM7;A0A338P729 Sept5 Septin-5 no no 0 0 0 0 9.5 3.95 1 2 1 1 1 74.355 74.355 2;3 2.4569E-05 27957 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 145.63 0 959.49 924.92 660.57 754.87 495.06 983.62 902 936 666 733 510 940 7 6 6 6 5 8 311210 21480 410;3398 20673 49792;49793;49794;49795;49796;49797 57731;57732;57733;57734;57735;57736;57737;57738;57739 57738 9 VNIVPVIAK Unmodified 951.6117 0.6117025 899 E9Q3V6;P42208;F6WYM0;D3YYB1;D3Z3C0 Sept2 Septin-2 yes no 0 0 0 0 11.3 1.25 1 1 1 68.667 68.667 2;3 0.00091902 19450 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.04 59.042 297.08 173.94 95.054 113.82 324.48 115.54 278 176 93 111 319 111 2 1 2 2 3 2 33504 21481 899 20674 49798;49799;49800 57740;57741;57742 57741 3 VNKPPYPK Unmodified 941.53345 0.53345218 269;2119 A0A1C7CYV0;B1AX58;Q99K51;Q61233 Pls3;Lcp1 Plastin-3;Plastin-2 no no 0 0 0 1 10 0 1 43.59 43.59 3 0.033076 9150 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 62.2 28.122 199.41 174.03 241.61 245.87 225.34 236.62 188 180 244 242 234 228 1 1 1 1 1 1 22529 21482 269;2119 20675 49801 57743 57743 1 VNLAELFK Unmodified 932.53312 0.53311783 1867 P99029;G3UZJ4;H3BJQ7 Prdx5 Peroxiredoxin-5, mitochondrial yes no 0 0 0 0 10.8 1.34 1 2 1 1 1 80.515 80.515 2;3 0.0014485 24801 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.9 78.49 1054.6 586.08 438.27 973.05 506.09 651.79 988 600 440 920 521 622 7 6 3 6 4 4 430990 21483 1867 20676 49802;49803;49804;49805;49806;49807 57744;57745;57746;57747;57748;57749;57750 57748 7 VNLAIWDTAGQER Unmodified 1471.7419 0.7419414 1516 P35282 Rab21 Ras-related protein Rab-21 yes yes 0 0 0 0 8 0 1 70.65 70.65 2 3.069E-08 23634 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.403 70.658 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21484 1516 20677 49808 57751 57751 1 VNLAMDVGK Unmodified 945.49535 0.49535211 1609 P52480 Pkm Pyruvate kinase PKM yes yes 0 0 0 0 10 2.16 1 1 1 61.635 61.635 2;3 0.00017211 21733 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 131.44 84.373 601.81 429.14 415.78 476.19 560.87 654.51 565 448 403 468 577 629 2 3 1 2 2 3 134350 21485 1609 20678 49809;49810;49811 57752;57753;57754 57754 3 VNLESPGPER Unmodified 1096.5513 0.55128709 1898 Q0VGU4 Vgf yes yes 0 0 0 0 4.5 0.5 1 1 44.995 44.995 2 0.017276 13891 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.434 32.691 0 23.753 72.023 51.45 0 104.47 0 23 70 51 0 98 0 1 2 2 0 2 8637.6 21486 1898 20679 49812;49813 57755;57756 57755 2 VNLFILGK Unmodified 902.55894 0.55893865 857 E9PYT0;P97393 Arhgap5 Rho GTPase-activating protein 5 yes no 0 0 0 0 6.5 5.5 1 1 79.437 79.437 2 0.0075408 27809 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 85.064 31.898 30.044 0 0 50.278 0 0 28 0 0 46 0 0 1 0 0 1 0 0 3264.3 21487 857 20680 49814;49815 57757;57758 57757 2 VNLFPGLSPSALK Unmodified 1341.7656 0.76563696 1658 Z4YJL4;P58871 Tnks1bp1 182 kDa tankyrase-1-binding protein yes no 0 0 0 0 8 4.97 1 1 1 81.149 81.149 3 0.0044436 28444 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 50.563 29.013 50.025 0 68.299 39.93 26.088 39.764 47 0 65 38 28 38 2 0 2 1 1 1 8919.3 21488 1658 20681 49816;49817;49818 57759;57760;57761 57759 3 VNLGVGAYR Unmodified 947.51886 0.51886475 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 8 0 1 52.382 52.382 2 1.0366E-11 14986 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.9 95.065 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21489 1311 20682 49819 57762 57762 1 VNLLSFTGSTQVGK Unmodified 1449.7827 0.78274359 3122 Q9DBF1;G3UYR8;G3UY72 Aldh7a1 Alpha-aminoadipic semialdehyde dehydrogenase yes no 0 0 0 0 9.2 4.17 1 1 1 2 74.597 74.597 2;3;4 9.1367E-17 22013 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.48 90.839 167.7 127.92 289.3 140.61 140.05 138.04 158 134 279 138 139 130 2 2 4 3 3 2 94957 21490 3122 20683 49820;49821;49822;49823;49824 57763;57764;57765;57766;57767;57768 57765 6 VNLQGDIVDR Unmodified 1127.5935 0.59348625 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3 Add1 Alpha-adducin yes no 0 0 0 0 4.5 0.5 1 1 54.505 54.505 2 0.0035651 18410 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.017 46.764 39.092 84.455 136.68 59.828 187.87 84.221 37 84 129 56 185 83 1 3 2 1 3 2 39994 21491 3276 20684 49825;49826 57769;57770;57771 57769 3 VNMEDLR Unmodified 875.4171 0.41710179 112;3317;575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46;A0A0J9YTY0;A0A0J9YUL3;Q8C1B7;Q9R1T4 Sept8;Sept11;Sept6 Septin-8;Septin-11;Septin-6 no no 0 0 0 0 5 0 1 49.585 49.585 2 0.0381 15727 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.809 21.123 88.057 80.704 99.939 115.37 0 99.138 83 83 102 111 0 93 1 1 1 1 0 1 27196 21492 575;112;3317 20685 49827 57772 57772 1 VNNASLIGLGYTQTLRPGVK Unmodified 2100.1691 0.1691376 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 1 7.5 4.75 2 1 1 1 1 67.62 67.62 3;4 2.8061E-22 18560 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 131.09 111.78 440.38 112.07 221 337.32 105 286.75 412 116 214 316 102 269 6 3 5 5 2 4 127480 21493 1141 20686 49828;49829;49830;49831;49832;49833 57773;57774;57775;57776;57777;57778;57779 57778 7 VNNASLIGLGYTQTLRPGVK Deamidation (N) 2101.1532 0.15315318 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 1 0 1 9 0 2 69.34 69.34 3;4 0.00011472 22340 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.511 41.086 86.074 56.275 0 0 0 0 83 56 0 0 0 0 2 1 0 0 0 0 8205.9 21494 1141 20686 49834;49835 57780;57781 57780 300;301 2 VNNASLIGLGYTQTLRPGVK 2 Deamidation (N) 2102.1372 0.13716877 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 2 0 1 10 0 1 69.345 69.345 4 0.042462 20234 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 40.384 26.796 0 0 47.171 58.397 0 0 0 0 46 56 0 0 0 0 1 1 0 0 2701.3 21495 1141 20686 49836 57782 57782 300;301 1 VNNFPPLPK Unmodified 1024.5706 0.57056597 3229 Q9JKD3;A0A1L1SVG3;A0A1L1SRT6 Scamp5 Secretory carrier-associated membrane protein 5 yes no 0 0 0 0 9.17 0.687 1 3 2 63.991 63.991 2;3 0.0012807 20384 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.798 70.739 118.17 176.16 334.47 285.41 165.75 175.14 111 176 324 279 167 167 3 4 5 6 3 3 28214 21496 3229 20687 49837;49838;49839;49840;49841;49842 57783;57784;57785;57786;57787;57788;57789;57790;57791 57788 9 VNNSSLIGLGYTQTLKPGIK Unmodified 2102.1736 0.17355427 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 1 9.91 3.06 1 2 2 3 2 1 69.765 69.765 3;4;5 1.9359E-12 25703 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.86 92.848 930.43 696.65 1760.5 480.01 558.02 536.26 874 714 1669 457 549 506 6 7 9 5 7 5 1061500 21497 2097 20688 49843;49844;49845;49846;49847;49848;49849;49850;49851;49852;49853 57792;57793;57794;57795;57796;57797;57798;57799;57800;57801;57802;57803;57804 57804 13 VNNSSLIGLGYTQTLKPGIK Deamidation (N) 2103.1576 0.15756986 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 1 0 1 10.4 1.22 2 3 2 1 73.359 73.359 3;4 1.5828E-12 22225 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 109.03 99.62 394.08 246.04 926.12 402.86 577.89 196.37 370 249 888 390 567 186 3 4 7 4 5 2 167990 21498 2097 20688 49854;49855;49856;49857;49858;49859;49860;49861 57805;57806;57807;57808;57809;57810;57811;57812 57809 816;817 8 VNNSSLIGVGYTQTLRPGVK Deamidation (N) 2103.1324 0.13241774 2096 Q60930;G3UX26 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 1 0 1 8.33 0.471 2 1 65.625 65.625 3;4 1.1864E-10 20791 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 80.224 53.789 128.68 0 309.5 251.62 169.2 97.173 121 0 297 250 176 93 2 0 3 3 3 1 21281 21499 2096 20689 49862;49863;49864 57813;57814;57815 57815 814 3 VNNSSLIGVGYTQTLRPGVK Unmodified 2102.1484 0.14840216 2096 Q60930;G3UX26 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 1 10.7 1.11 1 2 1 2 61.986 61.986 3;4;5 1.3838E-12 16885 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.92 63.375 792.32 681.64 867.65 1075.1 371.45 885.91 745 690 868 1030 409 841 6 6 4 7 3 5 159140 21500 2096 20689 49865;49866;49867;49868;49869;49870 57816;57817;57818;57819;57820;57821;57822;57823 57818 8 VNPCIGGVILFHETLYQK Unmodified 2087.0874 0.087381804 1309 P05064;A6ZI44;D3YWI1;D3Z510;A0A0U1RPN8;A0A0U1RPT5;D3YV98;A6ZI47 Aldoa;Aldoart2 Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 10.5 0.957 1 2 2 1 76.652 76.652 3;4 2.484E-53 23468 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 165.75 135.33 177.6 252.27 216.76 233.49 203.64 293.16 167 251 213 222 203 277 3 4 4 4 3 4 113310 21501 1309 20690 49871;49872;49873;49874;49875;49876 57824;57825;57826;57827;57828;57829;57830 57826 7 VNPLSLVEIILHVVR Unmodified 1700.0349 0.034875949 3352 Q9WVJ2;E9Q5I9;E9Q0U1 Psmd13 26S proteasome non-ATPase regulatory subunit 13 yes no 0 0 0 0 13 0 1 111.42 111.42 3 5.5589E-05 44427 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.842 70.684 0 0 0 6.558 0 6.396 0 0 0 6 0 6 0 0 0 1 0 1 473.99 21502 3352 20691 49877 57831 57831 1 VNPLSVLEAVK Unmodified 1167.6863 0.68632401 1953 Q3U125;Q9CYH2 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 0 12 1.41 1 2 86.07 86.07 2;3 0.00057113 27591 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.819 55.49 20.387 28 0 80.882 0 59.696 19 28 0 74 0 56 1 1 0 2 0 1 17475 21503 1953 20692 49878;49879;49880 57832;57833;57834;57835 57832 4 VNPLSVLEAVKK Unmodified 1295.7813 0.78128702 1953 Q3U125;Q9CYH2 Fam213a Redox-regulatory protein FAM213A yes no 0 0 0 1 11 0 1 78.401 78.401 3 0.035296 23816 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.207 25.629 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17326 21504 1953 20693 49881 57836 57836 1 VNPLSWIQK Unmodified 1083.6077 0.60767975 614;786 D3Z7D3;F8WI56;Q8BWT5;B2RQ71;E9PWR4 Dip2a;Dip2c Disco-interacting protein 2 homolog A no no 0 0 0 0 11.5 0.5 1 1 79.462 79.462 2;3 0.0010158 21474 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.21 53.651 0 29.792 0 82.384 36.384 73.582 0 28 0 76 37 70 0 1 0 2 1 2 8377.6 21505 786;614 20694 49882;49883 57837;57838 57838 2 VNPSNHR Unmodified 822.40965 0.40964865 844 E9PXB7;Q8CFI0;A0A286YDR6 Nedd4l E3 ubiquitin-protein ligase NEDD4-like yes no 0 0 0 0 6 0 1 18.262 18.262 3 0.0060001 2613 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.813 60.076 0 6.3053 4.7082 7.2627 5.7283 6.2325 0 6 5 7 6 6 0 1 1 1 1 1 772.99 21506 844 20695 49884 57839 57839 1 VNPTVFFDITADDEPLGR Acetyl (Protein N-term) 2046.9898 0.98983583 1404 P17742;A0A1L1SRX5 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 1 0 0 0 6.33 3.25 1 1 1 1 1 1 106.89 106.89 2 3.7698E-150 36398 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 168.05 146.68 1 1.064 11 9 3 1.066 1 1 11 9 3 1 1 1 2 1 2 1 156040 21507 1404 20696 49885;49886;49887;49888;49889;49890 57840;57841;57842;57843;57844;57845;57846;57847;57848;57849;57850;57851;57852;57853;57854 57846 15 VNPTVFFDITADDEPLGR Unmodified 2004.9793 0.97927114 1404 P17742;A0A1L1SRX5 Ppia Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 9 3.02 1 2 2 1 1 1 3 89.62 89.62 2;3;4 3.9186E-38 35376 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.64 104.8 99.545 72.352 41.069 94.162 76.702 93.574 93 68 38 89 77 88 4 2 1 5 6 3 236000 21508 1404 20696 49891;49892;49893;49894;49895;49896;49897;49898;49899;49900;49901 57855;57856;57857;57858;57859;57860;57861;57862;57863;57864;57865;57866 57866 12 VNPVTALTLLEK Unmodified 1296.7653 0.76530261 555 A6H5Z3 Exoc6b Exocyst complex component 6B yes yes 0 0 0 0 9.5 0.5 1 1 86.15 86.15 2;3 2.3578E-05 27588 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 99.5 68.006 40.584 37.695 0 0 29.288 0 38 38 0 0 28 0 2 2 0 0 1 0 2980.5 21509 555 20697 49902;49903 57867;57868 57868 2 VNQAIWLLCTGAR Unmodified 1500.7871 0.78711746 723 D3YYM6;D3Z1S8;Q91V55;P97461 Rps5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 0 11 0 1 76.988 76.988 2 8.6083E-05 23148 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.08 37.778 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 11893 21510 723 20698 49904 57869 57869 1 VNQIGSVTEAIQACK Deamidation (N) 1617.8032 0.80322103 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 1 0 0 6 0.816 1 1 1 69.361 69.361 3 1.1971E-07 24032 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.69 89.971 68.735 92.795 91.059 57.718 43.457 58.456 65 93 92 56 46 56 2 2 2 1 1 1 15916 21511 1399 20699 49905;49906;49907 57870;57871;57872 57871 495 3 VNQIGSVTEAIQACK Unmodified 1616.8192 0.81920545 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 8.75 1.98 1 1 2 2 1 1 66.462 66.462 2;3;4 6.6212E-26 22284 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 147.56 109.05 733.81 429.67 854.9 862.04 1123.9 927.63 689 445 845 854 1134 896 7 4 7 9 8 7 280360 21512 1399 20699 49908;49909;49910;49911;49912;49913;49914;49915 57873;57874;57875;57876;57877;57878;57879;57880;57881;57882 57874 10 VNQIGSVTESLQACK Unmodified 1632.8141 0.81412007 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 9.33 2.75 1 1 1 1 2 63.672 63.672 2;3 2.0054E-29 22735 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 135.26 0 614.35 424.01 445.71 761.52 792.99 773.67 576 416 435 731 815 747 5 4 4 6 6 7 347620 21513 1398 20700 49916;49917;49918;49919;49920;49921 57883;57884;57885;57886;57887;57888;57889;57890 57890 8 VNSEQEHFLIVPFGLLYSEVTASSLVK Unmodified 3005.575 0.57498923 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3 Add1 Alpha-adducin yes no 0 0 0 0 8.5 0.5 1 1 100.86 100.86 4 2.1195E-20 35863 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.762 63.492 29.741 48.198 27.243 49.335 21.925 53.74 28 47 28 47 23 51 2 2 1 2 1 2 4956.8 21514 3276 20701 49922;49923 57891;57892;57893 57892 3 VNSITVDNCK Unmodified 1148.5496 0.54957253 2996 Q9CYT6;D3YTR7;A0A286YCS6 Cap2 Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein yes no 0 0 0 0 6 0 1 49.214 49.214 3 0.045537 14978 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.015 22.207 68.574 102.06 110.38 72.91 74.055 0 65 102 111 74 74 0 1 1 1 1 1 0 3458 21515 2996 20702 49924 57894 57894 1 VNSLGETAQR Unmodified 1073.5465 0.54653606 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 38.515 38.515 2 1.9154E-09 10489 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 159.11 109.67 262.64 359.96 534.03 399 455.07 530.67 250 361 531 402 470 510 3 3 3 3 3 3 86130 21516 551 20703 49925;49926;49927;49928 57895;57896;57897;57898 57895 4 VNSSLSDELR Unmodified 1118.5568 0.5567664 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 4.5 0.5 1 1 50.656 50.656 2 0.0035521 16330 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.499 8.9323 49.128 45.631 0 49.042 65.737 0 46 46 0 46 65 0 1 1 0 1 1 0 3555.5 21517 2046 20704 49929;49930 57899;57900 57900 2 VNSSLSDELRR Unmodified 1274.6579 0.65787742 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 1 5 0 1 44.622 44.622 3 0.050552 13222 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 44.616 19.761 59.57 0 87.01 56.022 0 69.29 56 0 83 56 0 65 1 0 1 1 0 1 7321.4 21518 2046 20705 49931 57901 57901 1 VNTFSALLLEPYKPPSTQ Unmodified 2004.0568 0.056793183 1224 O54984 Asna1 ATPase Asna1 yes yes 0 0 0 1 10.5 0.5 1 1 86.73 86.73 3 1.0547E-06 27864 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.088 53.153 40.45 0 54.406 12.85 22.794 38.604 38 0 51 14 23 38 2 0 2 1 1 2 15873 21519 1224 20706 49932;49933 57902;57903;57904 57902 3 VNTIPGFDGVVK Unmodified 1244.6765 0.6764876 2782 Q91ZA3;H3BL62;D3YZC0 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes no 0 0 0 0 8 0 1 69.939 69.939 2 0.0010408 23293 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.611 39.316 39.411 0 48.808 17.17 36.595 38.398 37 0 46 19 37 37 1 0 1 1 1 1 3276.5 21520 2782 20707 49934 57905 57905 1 VNTLEEGK Unmodified 888.45526 0.45526144 2160 Q62443 Nptx1 Neuronal pentraxin-1 yes yes 0 0 0 0 5 0 1 46.943 46.943 2 0.053287 14470 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.303 0.10262 78.647 72.336 65.593 0 0 88.478 74 74 65 0 0 83 1 1 1 0 0 1 4448.5 21521 2160 20708 49935 57906 57906 1 VNVADEVQR Unmodified 1028.5251 0.52507234 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 3 0 1 43.595 43.595 2 0.00079808 13609 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 115.82 49.321 148.64 0 85.3 84.327 69.535 116.34 139 0 83 83 74 111 1 0 1 1 1 1 7372.1 21522 3275 20709 49936 57907 57907 1 VNVADILTK Unmodified 971.56515 0.56514624 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 8 0 1 71.634 71.634 2 0.020683 24066 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.439 32.504 88.542 0 86.942 54.273 93.192 46.377 83 0 83 56 93 46 1 0 1 1 1 1 3098.9 21523 3449;3451;3452 20710 49937 57908 57908 1 VNVAGLVLAGSADFK Unmodified 1459.8035 0.80347903 2474 Q8BWY3 Etf1 Eukaryotic peptide chain release factor subunit 1 yes yes 0 0 0 0 9.5 0.5 1 1 84.978 84.978 3 0.00065287 27125 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.549 31.573 29.904 27.776 0 40.441 0 19 28 28 0 37 0 19 1 1 0 1 0 1 3737 21524 2474 20711 49938;49939 57909;57910 57910 2 VNVPEESR Unmodified 928.46141 0.46140945 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 3.5 0.5 1 1 38.261 38.261 2 0.010378 11259 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.75 58.957 0 0 0 109.47 107.45 105.67 0 0 0 102 111 102 0 0 0 1 1 1 15051 21525 3274 20712 49940;49941 57911;57912 57911 2 VNVPVIGGHAGK Unmodified 1146.6509 0.65094155 1327 P08249;A0A0G2JF23 Mdh2 Malate dehydrogenase, mitochondrial yes no 0 0 0 0 8.88 3.52 1 2 2 1 2 50.765 50.765 2;3;4 6.9955E-19 13526 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.06 106.29 3719.2 3436.9 4838.8 3977.2 4422.6 4690 3501 3493 4826 3976 4492 4514 6 6 5 8 7 6 895940 21526 1327 20713 49942;49943;49944;49945;49946;49947;49948;49949 57913;57914;57915;57916;57917;57918;57919;57920;57921 57918 9 VNVVEQEK Unmodified 943.49746 0.4974606 1398 P17182;Q6PHC1;B0QZL1;B1ARR7 Eno1 Alpha-enolase;Enolase yes no 0 0 0 0 7.25 3.34 2 1 1 47.044 47.044 2;3 0.0022579 14575 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.143 43.785 538.09 381.72 311.67 430.26 485.54 266.25 505 389 327 419 488 260 4 2 3 4 3 1 122050 21527 1398 20714 49950;49951;49952;49953 57922;57923;57924;57925 57922 4 VNWQSYLQGQMISAEDCEFIQR Unmodified 2701.2265 0.22647084 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 7 0 1 87.153 87.153 3 1.6388E-07 32044 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.347 51.498 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21528 65 20715 49954 57926 57926 1 VNYVVQEAIVVIK Unmodified 1472.8603 0.86026563 1203 Q5SVG5;Q5SVG4;O35643 Ap1b1 AP-1 complex subunit beta-1 yes no 0 0 0 0 8.5 0.5 1 1 86.316 86.316 3 7.509E-05 30168 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.633 48.805 0 9.0847 98.102 44.431 0 0 0 9 93 46 0 0 0 1 2 2 0 0 4525.7 21529 1203 20716 49955;49956 57927;57928 57928 2 VNYVVQEAIVVIR Unmodified 1500.8664 0.86641364 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 8 0.816 1 1 1 83.172 83.172 2;3 0.0036069 30309 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.64 39.786 30.044 9.2416 39.265 29.107 38.411 0 28 9 38 28 38 0 1 1 2 1 2 0 13489 21530 3123 20717 49957;49958;49959 57929;57930;57931 57929 3 VPAANVLSQESK Unmodified 1241.6616 0.66156582 3202 Q9JHI5 Ivd Isovaleryl-CoA dehydrogenase, mitochondrial yes yes 0 0 0 0 7 0 1 56.702 56.702 3 0.052765 17662 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.737 18.411 38.834 85.534 73.187 34.88 63.741 77.065 37 84 74 37 65 74 1 1 1 1 1 1 4664.9 21531 3202 20718 49960 57932 57932 1 VPAFEGDDGFCVFESNAIAYYVSNEELR Unmodified 3197.4288 0.42879528 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 5.5 0.5 1 1 100.21 100.21 4 0.0048034 35987 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.317 29.418 0 6 0 5 0 0 0 6 0 5 0 0 0 1 0 1 0 0 1955.9 21532 3094 20719 49961;49962 57933;57934 57933 2 VPAGNWVLIEGVDQPIVK Unmodified 1933.0673 0.067298289 464 G3UZ34;A2AH85;O08810 Eftud2 116 kDa U5 small nuclear ribonucleoprotein component yes no 0 0 0 0 7 0 1 85.01 85.01 3 4.3487E-05 30982 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.918 47.038 30.044 0 0 30.604 0 29.848 28 0 0 28 0 28 1 0 0 1 0 1 1766.2 21533 464 20720 49963 57935 57935 1 VPAINVNDSVTK Unmodified 1255.6772 0.67721588 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 6.5 0.5 1 1 59.725 59.725 2;3 0.00021325 19117 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 72.958 46.444 0 29.792 0 48.908 72.849 67.211 0 28 0 46 74 65 0 1 0 1 1 1 7371.1 21534 1594 20721 49964;49965 57936;57937 57937 2 VPCGTSDEYR Unmodified 1182.4975 0.49753696 3249 Q9JME5 Ap3b2 AP-3 complex subunit beta-2 yes yes 0 0 0 0 4.5 0.5 1 1 39.754 39.754 2 0.001205 10994 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.062 49.036 69.264 64.044 26.629 49.092 36.791 28.798 65 65 28 47 37 28 2 2 1 2 1 1 9624.1 21535 3249 20722 49966;49967 57938;57939 57939 2 VPDFSDYR Unmodified 997.45051 0.45051041 2958 Q9CR68 Uqcrfs1 Cytochrome b-c1 complex subunit Rieske, mitochondrial;Cytochrome b-c1 complex subunit 11 yes yes 0 0 0 0 8 3.56 1 1 1 58.751 58.751 2 0.0036352 19515 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 122.18 91.672 483.32 308.09 201.4 196.7 235.76 549.22 453 307 194 195 241 520 3 1 2 3 3 3 163890 21536 2958 20723 49968;49969;49970 57940;57941;57942;57943 57941 4 VPDTAWDGTQSK Unmodified 1303.6044 0.60444487 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 56.189 56.189 3 3.0158E-05 18948 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.697 67.092 137.84 214.76 154.34 230.73 202.55 280.97 130 213 158 223 213 269 1 2 1 2 2 2 21290 21537 2186 20724 49971;49972 57944;57945 57944 2 VPEANSSWMDTVIR Unmodified 1603.7664 0.7664416 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 71.709 71.709 3 0.0010184 24734 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.641 42.063 0 38.901 27.962 0 37.347 39.442 0 37 28 0 37 38 0 1 1 0 1 1 9767 21538 2433 20725 49973;49974 57946;57947 57947 2 VPEAQTGQASDYGLFLSDEDPR Unmodified 2394.0975 0.097548378 287 E9PUM4;A0A1L1SQ51;Q71LX4;A0A1L1SVA8 Tln2 Talin-2 yes no 0 0 0 0 4 0 1 72.134 72.134 3 0.00022066 26322 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.705 26.211 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21539 287 20726 49975 57948 57948 1 VPEGDVTVILNNLLEGYDNK Unmodified 2201.1216 0.12157828 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 0 0 0 7.33 0.471 2 1 102.44 102.44 3;4 4.9304E-17 36955 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 120.11 97.033 15.628 5.7348 23.004 24.508 18.738 15.455 15 6 22 24 19 15 2 1 1 2 1 2 4022.2 21540 1435 20727 49976;49977;49978 57949;57950;57951 57950 3 VPEGDVTVILNNLLEGYDNK Deamidation (N) 2202.1056 0.10559387 1435 P22723;Q8C7N0 Gabrg2 Gamma-aminobutyric acid receptor subunit gamma-2 yes no 0 1 0 0 13 0 1 102.44 102.44 3 6.344E-05 41611 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 52.866 36.982 20.292 18.848 0 0 19.874 0 19 19 0 0 19 0 1 1 0 0 1 0 1322.3 21541 1435 20727 49979 57952 57952 529 1 VPEGGEGISATEVDSR Unmodified 1601.7533 0.75329395 581 E9QA63;B1ARU4;E9PVY8;Q9QXZ0;A0A0A0MQA6;F7ACR9;E9QNP1;F6XCT0;F6SHS0 Macf1 Microtubule-actin cross-linking factor 1 yes no 0 0 0 0 3 0 1 50.557 50.557 3 0.0012766 16926 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 50.053 35.607 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21542 581 20728 49980 57953 57953 1 VPELYEIHK Unmodified 1126.6023 0.60226003 2230 Q6PAJ1 Bcr Breakpoint cluster region protein yes yes 0 0 0 0 6 0 1 59.246 59.246 3 0.029618 19821 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.368 20.196 29.856 37.355 0 29.552 55.919 37.846 28 37 0 28 56 37 1 1 0 1 1 1 2623.1 21543 2230 20729 49981 57954 57954 1 VPEPEAIPPNILSYLVTGISVNCAYTSK Unmodified 3031.5576 0.5576246 1096 G5E829 Atp2b1 Plasma membrane calcium-transporting ATPase 1 yes yes 0 0 0 0 9.5 0.5 1 1 104.69 104.69 4 0.0011529 33524 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.637 25.896 9.5851 14.25 0 24.04 13.953 0 9 14 0 23 14 0 1 1 0 2 1 0 2655.2 21544 1096 20730 49982;49983 57955;57956 57956 2 VPESTGEESLSTYIFESNSEGEK Unmodified 2518.1235 0.12348836 2611 Q8K3G9;H3BJX0 Appl2 DCC-interacting protein 13-beta yes no 0 0 0 0 4 0 1 75.51 75.51 3 0.00259 27913 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 33.074 19.202 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21545 2611 20731 49984 57957 57957 1 VPETTQK Unmodified 801.42323 0.42323303 3321 Q9WTP7 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes yes 0 0 0 0 6 0 1 39.161 39.161 2 0.039057 10241 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.451 41.08 59.471 34.106 74.865 64.123 130.78 65.558 56 37 74 65 130 65 1 1 1 1 1 1 5410 21546 3321 20732 49985 57958 57958 1 VPEVTESHTTR Unmodified 1254.6204 0.62042929 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 4 0 1 35.218 35.218 3 0.0013301 9241 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.891 44.666 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6120 21547 510 20733 49986 57959 57959 1 VPFCLQSCVKPLK Unmodified 1574.8313 0.83129046 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1 11.5 0.5 1 1 67.112 67.112 3;4 4.056E-07 18664 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 111.94 93.107 196.94 422.8 264.42 202.2 0 221.73 186 414 257 185 0 208 1 2 1 1 0 1 83927 21548 789 20734 49987;49988 57960;57961 57960 2 VPFIHVGNQVVSELGPIVQFVK Unmodified 2405.3471 0.34710196 1265 O88441 Mtx2 Metaxin-2 yes yes 0 0 0 0 11 0.707 1 2 1 94.808 94.808 3;4 3.6213E-16 30559 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 97.618 81.852 74.931 48.944 78.195 83.48 67.99 9.594 70 46 74 79 65 9 3 2 2 3 2 1 17382 21549 1265 20735 49989;49990;49991;49992 57962;57963;57964;57965;57966;57967;57968;57969 57965 8 VPFPFLDIETCI Unmodified 1449.7214 0.72138888 502 A2APL5 Slc1a2 Amino acid transporter yes yes 0 0 0 0 10.5 2.5 1 1 111.63 111.63 2 0.00027688 37097 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.616 65.468 0 9.4743 6.0826 5.0281 3.953 12.792 0 9 6 5 4 12 0 2 1 1 1 1 1792.7 21550 502 20736 49993;49994 57970;57971 57970 2 VPGATMLLAK Unmodified 999.57869 0.57868781 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 11 0.707 1 2 1 69.616 69.616 2;3 0.0067022 17613 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.042 39.821 128.37 100.86 100.87 117.55 0 0 120 102 102 111 0 0 2 2 2 2 0 0 71992 21551 3170 20737 49995;49996;49997;49998 57972;57973;57974;57975 57975 4 VPGAYFFSFTAGK Unmodified 1390.6921 0.69213767 2628 Q8R066 C1qtnf4 Complement C1q tumor necrosis factor-related protein 4 yes yes 0 0 0 0 12 0 1 84.393 84.393 3 0.0011934 23483 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 60.301 37.768 30.044 0 0 0 57.53 0 28 0 0 0 55 0 1 0 0 0 1 0 2688.8 21552 2628 20738 49999 57976 57976 1 VPGGSPR Unmodified 668.36057 0.36057319 2646 Q8R1Q8 Dync1li1 Cytoplasmic dynein 1 light intermediate chain 1 yes yes 0 0 0 0 6 0 1 30.084 30.084 2 0.031155 6028 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.359 52.388 114.1 54.917 73.549 59.452 92.771 51.719 107 60 74 60 93 51 1 1 1 1 1 1 9709.1 21553 2646 20739 50000 57977 57977 1 VPGLYYFTYHASSR Unmodified 1659.8045 0.80454166 1370 P14106 C1qb Complement C1q subcomponent subunit B yes yes 0 0 0 0 12 0 1 66.657 66.657 3 0.0003063 16521 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.234 50.885 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21554 1370 20740 50001 57978 57978 1 VPIIVPIMMLAIK Unmodified 1436.8863 0.88628614 3249 Q9JME5;A0A140LHP9 Ap3b2 AP-3 complex subunit beta-2 yes no 0 0 0 0 13 0 1 109.52 109.52 3 1.5782E-05 44262 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.34 87.802 8.5601 4.7428 0 0 8.1563 6.1633 8 5 0 0 8 6 1 1 0 0 1 1 413.02 21555 3249 20741 50002 57979 57979 1 VPITAVIAAK Unmodified 981.62227 0.62226719 2178 Q64514;A0A087WRC0;A0A087WP19 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 11 0.816 1 1 1 69.625 69.625 2 5.9204E-05 19809 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 108.98 73.097 59.958 141.18 299.01 90.361 93.127 0 56 139 297 93 93 0 1 2 2 1 1 0 46142 21556 2178 20742 50003;50004;50005 57980;57981;57982 57981 3 VPLAIVNK Unmodified 852.54329 0.54328858 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 12 0.816 1 1 1 64.626 64.626 2 0.0049986 15789 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 115.3 26.564 49.176 36.052 0 223.58 0 84.214 46 37 0 218 0 79 1 1 0 3 0 1 34726 21557 3204 20743 50006;50007;50008 57983;57984;57985;57986 57985 4 VPLEEPPLGPDVEEEDDDLGK Unmodified 2291.0693 0.069267942 704 D3Z3U9;D3YWK8;F8WHM3;P16283 Slc4a3 Anion exchange protein 3 yes no 0 0 0 0 2 0 1 77.099 77.099 3 0.0017675 27591 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 42.123 33.414 0 3.0866 6.3068 0 0 6.396 0 3 6 0 0 6 0 1 1 0 0 1 717.76 21558 704 20744 50009 57987 57987 1 VPLEVQEADEAK Unmodified 1326.6667 0.66671078 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 5 0 1 58.851 58.851 3 0.055346 20261 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.204 16.892 20.244 28.427 0 71.045 0 0 19 28 0 65 0 0 1 1 0 1 0 0 3174.4 21559 3383 20745 50010 57988 57988 1 VPLGSVIK Unmodified 811.51674 0.51673948 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 0 10 0 1 62.686 62.686 3 0.015708 17232 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.981 21.96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21560 2467 20746 50011 57989 57989 1 VPLILVGNK Unmodified 951.6117 0.6117025 2460 Q8BU31 Rap2c Ras-related protein Rap-2c yes yes 0 0 0 0 6.5 5.5 1 1 73.226 73.226 2 0.0067811 18851 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 79.451 44.643 0 38.901 117.77 0 110.47 164.21 0 37 111 0 111 157 0 1 2 0 2 2 25576 21561 2460 20747 50012;50013 57990;57991 57991 2 VPLKPYAAPVPR Unmodified 1306.7761 0.77614207 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 1 11.5 0.5 1 1 54.415 54.415 3 0.0021149 13356 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.212 48.792 251.11 137.23 0 109.1 126.7 124.3 241 139 0 102 130 120 2 1 0 1 1 1 64435 21562 1081 20748 50014;50015 57992;57993 57992 2 VPLLLPNVSALESQIEMGNIVKPK Unmodified 2588.4611 0.46114544 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 1 10.5 0.5 1 1 93.462 93.462 3;4 6.713E-07 30553 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.916 37.858 0 23 0 0 0 0 0 23 0 0 0 0 0 1 0 0 0 0 5860.6 21563 2886 20749 50016;50017 57994;57995 57994 2 VPLMELPTYTGSVYPTVKPYHYPK Unmodified 2779.4295 0.42951096 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 1 10.5 0.5 1 1 75.889 75.889 4;5 1.0515E-09 22465 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 61.511 48.582 109.03 82.024 0 110.8 36.424 69.29 102 84 0 102 37 65 2 2 0 2 1 1 17370 21564 2322 20750 50018;50019 57996;57997 57997 2 VPLPSEILGPVDQYLGVPYAAPPIGEK Unmodified 2818.5157 0.51568344 462 A2AGI2;Q8BYM5;A2AGI0 Nlgn3 Neuroligin-3 yes no 0 0 0 0 8.33 0.471 2 1 101.34 101.34 3;4 1.2844E-07 35852 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.971 46.382 16.02 14.88 5.1803 5.1563 0 20.254 15 15 5 5 0 19 1 1 1 1 0 1 3582.9 21565 462 20751 50020;50021;50022 57998;57999;58000 57998 3 VPLPSLSPTMQAGTIAR Unmodified 1737.9447 0.94474031 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 11.2 1.6 1 1 1 2 72.603 72.603 2;3 2.1663E-06 21923 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.713 51.23 202.41 171.96 196.39 73.333 170.27 20.254 190 176 190 74 166 19 3 3 3 1 2 1 99966 21566 2433 20752 50023;50024;50025;50026;50027 58001;58002;58003;58004;58005 58002 5 VPLTTPHLEK Unmodified 1133.6445 0.64445919 2296 Q7TT37 Ikbkap Elongator complex protein 1 yes yes 0 0 0 0 8 0 1 54.237 54.237 3 0.042283 15832 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 40.589 15.116 0 38.231 68.036 0 0 69.29 0 37 65 0 0 65 0 1 1 0 0 1 2745.1 21567 2296 20753 50028 58006 58006 1 VPMILVGNK Unmodified 969.56812 0.56812313 1695;79 P61226;A0A0G2JDL9 Rap2b Ras-related protein Rap-2b no no 0 0 0 0 9 4.64 1 1 2 70.511 70.511 2;3 0.0001861 17921 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.86 72.387 365.44 153.92 307.2 188.61 224.31 340.36 343 167 297 185 231 324 4 3 3 2 3 3 50180 21568 1695;79 20754 50029;50030;50031;50032 58007;58008;58009;58010 58010 4 VPMNTVDFGHVTEEWR Unmodified 1915.8887 0.888682 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 10 3 1 1 69.046 69.046 3 7.3775E-06 25428 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.39 89 138.36 137.34 73.359 44.666 170.02 75.914 130 139 74 46 167 74 2 2 1 1 2 1 22646 21569 1553 20755 50033;50034 58011;58012 58012 2 VPNCNVVPHFNK Unmodified 1423.7031 0.70305348 1929 Q3TL72;Q8C878 Uba3 NEDD8-activating enzyme E1 catalytic subunit yes no 0 0 0 0 8.5 0.5 1 1 54.216 54.216 3 0.00027667 15143 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.721 51.901 0 0 60.592 0 86.818 0 0 0 56 0 83 0 0 0 1 0 1 0 2508.8 21570 1929 20756 50035;50036 58013;58014 58014 2 VPNSVLWLLR Unmodified 1195.7077 0.70772815 2543 Q8CGY8 Ogt UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit yes yes 0 0 0 0 12 0 1 85.431 85.431 2 0.00017588 23976 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 98.943 52.481 32.869 26.848 43.502 28.011 0 49.036 31 28 43 28 0 46 1 1 1 1 0 1 9320.3 21571 2543 20757 50037 58015 58015 1 VPPATHK Unmodified 748.42317 0.42317345 2856 Q99L47;F8WJK8;E9Q1V0;E9Q1X9;E9Q5V1 St13 Hsc70-interacting protein yes no 0 0 0 0 7.5 0.5 1 1 32.22 32.22 3 0.018342 6376 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.682 43.125 88.775 125.43 60.592 117.88 421.37 273.66 83 121 56 111 417 268 2 2 1 2 4 4 7899.2 21572 2856 20758 50038;50039 58016;58017;58018;58019 58016 4 VPPFYYRPTFSDCQLLR Unmodified 2158.067 0.066980713 849 E9PY16 Adap1 yes yes 0 0 0 1 12 0 1 72.992 72.992 3 0.0039167 18871 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 48.216 30.728 0 20.216 0 0 0 44.772 0 19 0 0 0 42 0 1 0 0 0 1 4979.8 21573 849 20759 50040 58020 58020 1 VPPGGLENVLTTPETVLTGHTEK Unmodified 2388.2537 0.25365509 3053 Q9D2V7 Coro7 Coronin-7 yes yes 0 0 0 0 6 0 1 77.661 77.661 4 0.0026262 28323 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 39.188 24.26 0 29.792 0 50.278 0 29.848 0 28 0 46 0 28 0 1 0 1 0 1 2359.2 21574 3053 20760 50041 58021 58021 1 VPPLIASFVR Unmodified 1097.6597 0.65971533 1176 O09131 Gsto1 Glutathione S-transferase omega-1 yes yes 0 0 0 0 3.75 4.76 3 1 83.884 83.884 2 2.2914E-09 29145 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 158.61 113.28 308.75 362.72 384.71 178.14 355.72 354.42 291 364 383 177 356 342 5 5 5 4 4 5 50408 21575 1176 20761 50042;50043;50044;50045 58022;58023;58024;58025;58026;58027;58028 58022 7 VPPPPPIAR Unmodified 942.56509 0.56508666 3389 Q9Z204 Hnrnpc Heterogeneous nuclear ribonucleoproteins C1/C2 yes yes 0 0 0 0 7.5 0.5 1 1 49.766 49.766 2 0.0021024 13772 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.51 5.5246 178.27 91.603 76.82 165.59 134.11 107.03 167 93 74 158 139 102 2 1 1 2 2 1 27982 21576 3389 20762 50046;50047 58029;58030 58030 2 VPPVQVSPLIK Unmodified 1175.7278 0.72779489 1889 Q06185;Q8BTB6 Atp5i;Atp5k ATP synthase subunit e, mitochondrial yes no 0 0 0 0 9.67 0.471 1 2 69.56 69.56 2;3 0.00026026 20317 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.298 57.489 248.31 42.23 186.22 145.06 131.93 98.149 232 46 176 138 130 93 3 1 3 2 4 2 28691 21577 1889 20763 50048;50049;50050 58031;58032;58033;58034;58035 58034 5 VPQASAMK Unmodified 830.43202 0.43202358 1040 F8WGT1;Q68FL4;E9PX77 Ahcyl2 Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 yes no 0 0 0 0 8 0 1 45.847 45.847 2 0.04846 11933 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.265 28.069 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 3771.1 21578 1040 20764 50051 58036 58036 1 VPQATAEAK Unmodified 913.4869 0.48689592 3227 Q9JKC6 Cend1 Cell cycle exit and neuronal differentiation protein 1 yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 41.806 41.806 2 0.00032303 11576 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.27 69.352 442.59 139.31 429 624.98 279.27 313.32 415 139 415 600 287 298 4 2 3 5 4 4 124360 21579 3227 20765 50052;50053;50054;50055;50056 58037;58038;58039;58040;58041 58038 5 VPQIEVETHK Unmodified 1178.6295 0.62953741 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 6 0 1 51.037 51.037 3 0.00083087 15838 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.692 46.561 108.7 50.869 82.906 74.066 99.653 105.89 102 56 83 74 102 102 1 1 1 1 1 1 8381.9 21580 3204 20766 50057 58042 58042 1 VPQNPHGKPK Unmodified 1100.6091 0.60907674 1333 P09405 Ncl Nucleolin yes yes 0 0 0 1 9 0 1 33.346 33.346 4 0.032126 5986 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 46.606 25.736 108.59 60.28 93.198 73.256 110.14 75.741 102 65 93 74 111 74 1 1 1 1 1 1 9697.3 21581 1333 20767 50058 58043 58043 1 VPRPEDTLTYADLDMVHLSR Unmodified 2327.158 0.15798057 2224 Q6P6I8;E0CYM8;P97797;A0A0R4J1Z7;E0CX65;E9QPT7 Sirpa Tyrosine-protein phosphatase non-receptor type substrate 1 yes no 0 0 0 1 6 0.816 1 1 1 69.413 69.413 4 0.0013614 24429 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 43.841 33.701 108.91 38.738 127.37 60.355 141.96 19.168 102 37 120 56 139 19 2 1 2 1 3 1 22564 21582 2224 20768 50059;50060;50061 58044;58045;58046 58045 3 VPSALAPASQEPPPAASAEADGK Unmodified 2160.0699 0.069877064 2590 Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein yes no 0 0 0 0 5.33 0.471 2 1 59.581 59.581 3;4 5.1609E-12 20557 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.062 53.971 39.522 78.736 30.097 98.872 194.43 115.22 37 74 28 93 194 111 1 2 1 3 4 3 18447 21583 2590 20769 50062;50063;50064 58047;58048;58049;58050 58047 4 VPSAPGQESPVPDTK Unmodified 1507.7518 0.75183739 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.33 4.03 1 1 1 52.412 52.412 3 8.1838E-05 17293 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.647 66.418 207.11 180.6 136.25 171.06 195.31 135.36 194 185 139 166 194 129 2 4 2 2 2 2 28297 21584 510 20770 50065;50066;50067 58051;58052;58053;58054 58054 4 VPSENVLGEVGDGFK Unmodified 1545.7675 0.76748745 577 B1AR28;P50544 Acadvl Very long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 5 0 1 73.473 73.473 3 0.00067714 26954 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.209 43.86 59.677 24.966 47.973 0 58.576 0 56 28 46 0 56 0 1 1 1 0 1 0 3430.3 21585 577 20771 50068 58055 58055 1 VPSFAQKPK Unmodified 1000.5706 0.57056597 171 A0A0R4J0F6;Q99KY4;F6SLK1 Gak Cyclin-G-associated kinase yes no 0 0 0 1 11 0 1 49.897 49.897 3 0.041022 11596 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.49 26.106 158 0 0 0 0 0 158 0 0 0 0 0 1 0 0 0 0 0 14180 21586 171 20772 50069 58056 58056 1 VPSPVSSEDDLQEEEQLEQAIK Unmodified 2469.1759 0.17585828 1882 Q03517;Q4W8U9 Scg2 Secretogranin-2;Secretoneurin;Manserin yes no 0 0 0 0 3 0 1 76.943 76.943 4 0.044842 29080 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 27.904 13.743 0 0 0 0 38.044 19.168 0 0 0 0 37 19 0 0 0 0 1 1 2507.4 21587 1882 20773 50070 58057 58057 1 VPSTEAEALASSLMGLFEK Unmodified 1978.9921 0.99214402 2132 Q61598;A0A1Y7VL99 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 9.8 1.72 1 2 1 1 107.5 107.5 3;4 7.8425E-14 37194 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 116.13 73.565 21.288 63.874 28.514 36.47 57.877 44.276 20 62 28 35 58 42 3 5 3 3 5 3 18780 21588 2132 20774 50071;50072;50073;50074;50075 58058;58059;58060;58061;58062;58063;58064;58065 58060 8 VPSTETEALASNLMGMFEK Unmodified 2053.97 0.97002836 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 7.75 0.829 2 1 1 96.289 96.289 3;4 1.7653E-19 34746 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 126.19 108.09 21.406 20.216 28.692 66.602 50.291 66.789 20 19 28 63 51 64 2 1 2 4 3 4 19998 21589 1595 20775 50076;50077;50078;50079 58066;58067;58068;58069;58070 58069 5 VPSTETEALASNLMGMFEK Deamidation (N) 2054.954 0.95404395 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 1 0 0 9 0 1 96.446 96.446 3 9.1542E-06 34551 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 60.564 49.906 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21590 1595 20775 50080 58071 58071 612 1 VPTFCDHCGSLLWGLLR Unmodified 2029.9866 0.9866219 1388 P16054 Prkce Protein kinase C epsilon type yes yes 0 0 0 0 10 0 1 84.113 84.113 3 0.00013603 26668 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.186 50.131 29.692 36.899 27.932 0 28.291 29.041 28 37 28 0 28 28 1 1 1 0 1 1 5889.8 21591 1388 20776 50081 58072 58072 1 VPTGAESQVLLTYEEVAR Unmodified 1961.0106 0.010571271 2259 Q6XE40;O88910 Mpp3 MAGUK p55 subfamily member 3 yes no 0 0 0 0 5 0 1 77.937 77.937 3 6.5752E-05 29091 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.564 42.647 0 0 0 9.837 0 20.254 0 0 0 9 0 19 0 0 0 1 0 1 4430.1 21592 2259 20777 50082 58073 58073 1 VPTHVPVCVLGNYR Unmodified 1609.8399 0.83988131 2070 Q5U3K5 Rabl6 Rab-like protein 6 yes yes 0 0 0 0 9 0 1 58.243 58.243 3 0.0011513 17058 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.185 37.627 60.088 0 0 71.045 0 0 56 0 0 65 0 0 1 0 0 1 0 0 8695.1 21593 2070 20778 50083 58074 58074 1 VPTIFLSK Unmodified 903.54295 0.54295423 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 12 0 1 73.347 73.347 2 0.023686 18964 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.064 41.986 88.18 81.045 78.997 123.51 156.34 94.677 83 83 83 120 158 93 1 1 1 1 1 1 11758 21594 2594 20779 50084 58075 58075 1 VPTISINK Unmodified 870.51747 0.51746776 1536;2996 P40124;Q9CYT6;D3YTR7;A0A286YCS6 Cap1;Cap2 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein no no 0 0 0 0 10 0.894 2 1 2 60.062 60.062 2;3 0.0011058 16054 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.63 67.959 266.87 260.77 617.35 673.04 206.85 854.36 251 265 604 653 212 807 2 2 2 3 1 3 224780 21595 1536;2996 20780 50085;50086;50087;50088;50089 58076;58077;58078;58079;58080 58078 5 VPTLEQHYEELQAR Unmodified 1711.8529 0.85294842 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 8 3.56 1 1 1 54.557 54.557 3 7.6232E-17 18336 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 127.78 95.618 258.32 54.248 0 179.13 265.19 201.07 241 56 0 167 268 194 3 1 0 2 3 2 49613 21596 2186 20781 50090;50091;50092 58081;58082;58083 58081 3 VPTPNVSVVDLTCR Deamidation (N) 1556.7868 0.78684269 1395;3448 P16858;A0A0A0MQF6;S4R257;A0A0R4J0X7;S4R2G5;Q64467;S4R1W1 Gapdh;Gapdhs;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific no no 0 1 0 0 9 4 1 1 70.532 70.532 3 0.01886 26027 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 46.926 32.364 78.917 62.612 73.397 56.489 18.336 19.731 74 65 74 56 19 19 1 2 2 2 1 1 11233 21597 1395;3448 20782 50093;50094 58084;58085 58085 474 2 VPTPNVSVVDLTCR Unmodified 1555.8028 0.8028271 1395;3448 P16858;A0A0A0MQF6;S4R257;A0A0R4J0X7;S4R2G5;Q64467;S4R1W1 Gapdh;Gapdhs;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific no no 0 0 0 0 8.5 2.32 3 3 3 1 1 1 2 68.62 68.62 2;3 9.2884E-36 22653 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 175.6 152.73 749.96 530.56 885.86 748.47 1180.2 565.73 705 542 864 739 1177 546 8 8 10 8 13 9 2049800 21598 1395;3448 20782 50095;50096;50097;50098;50099;50100;50101;50102;50103;50104;50105;50106;50107;50108 58086;58087;58088;58089;58090;58091;58092;58093;58094;58095;58096;58097;58098;58099;58100;58101;58102;58103 58095 18 VPTTGIIEYPFDLENIIFR Unmodified 2236.178 0.17797095 1427;1492 P30677;P21278 Gna14;Gna11 Guanine nucleotide-binding protein subunit alpha-14;Guanine nucleotide-binding protein subunit alpha-11 no no 0 0 0 0 8 0.816 1 1 1 104.31 104.31 3 4.0057E-07 36383 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.11 64.291 9.5993 3.1409 12.747 0 6.0623 6.223 9 3 12 0 6 6 1 1 2 0 1 1 11828 21599 1492;1427 20783 50109;50110;50111 58104;58105;58106 58105 3 VPTTGIIEYPFDLQSVIFR Unmodified 2194.1674 0.16740626 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 10 1.87 1 1 1 1 99.327 99.327 3 6.5152E-08 35434 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 83.253 56.104 31.581 25.825 6.8059 26.245 56.62 19.437 30 26 7 26 56 19 3 2 1 2 2 1 75213 21600 1428 20784 50112;50113;50114;50115 58107;58108;58109;58110;58111 58108 5 VPTTVEDR Unmodified 915.46616 0.46616048 519 A2ATI9;Q99JX3 Gorasp2 Golgi reassembly-stacking protein 2 yes no 0 0 0 0 5 0 1 40.17 40.17 2 0.0288 11221 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.198 21.455 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21601 519 20785 50116 58112 58112 1 VPVENVLGEVGGGFK Unmodified 1499.7984 0.79839365 2567 Q8JZN5;A0A0G2JF25 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes no 0 0 0 0 7 0 1 79.982 79.982 3 7.0365E-06 28583 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.652 65.417 49 25.849 38.236 0 36.358 68.253 46 28 37 0 37 65 1 1 1 0 1 1 3834.6 21602 2567 20786 50117 58113 58113 1 VPVFRPMDLMVEASPR Unmodified 1842.9484 0.94844548 2211 Q6P1F6;Q9CWU3 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 1 9 0 1 76.134 76.134 3 0.0077221 25578 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 47.568 28.244 0 0 37.932 47.184 44.308 47.772 0 0 37 46 46 46 0 0 1 1 1 1 5136.1 21603 2211 20787 50118 58114 58114 1 VPVGDQPK Unmodified 838.45487 0.45486751 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 6.5 0.5 1 1 44.005 44.005 2 0.0069586 12533 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.318 53.943 88.789 53.597 0 70.245 42.551 68.076 83 56 0 65 46 65 1 1 0 1 1 1 10570 21604 815;2590 20788 50119;50120 58115;58116 58115 2 VPVGDQPPDIEFQIR Unmodified 1708.8784 0.87843489 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 6.5 3.1 2 1 1 1 1 71.893 71.893 2;3 2.3492E-07 25640 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.61 77.55 384.14 150.06 412.73 332.91 472.12 288.3 361 157 398 334 472 278 7 4 5 6 6 5 280110 21605 118;1534 20789 50121;50122;50123;50124;50125;50126 58117;58118;58119;58120;58121;58122;58123;58124 58121 8 VPVGDQPPDIEYQIR Unmodified 1724.8733 0.87334951 960 E9QLL2;Q8BZ98 Dnm3 Dynamin-3 yes no 0 0 0 0 4.5 0.5 1 1 64.988 64.988 2;3 5.4814E-05 22957 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.759 64.096 29.792 17.75 27.366 38.495 45.388 58.401 28 19 28 37 47 56 1 1 1 1 2 2 9120.1 21606 960 20790 50127;50128 58125;58126 58126 2 VPVILVGNK Unmodified 937.59605 0.59605244 2346 Q80ZJ1 Rap2a Ras-related protein Rap-2a yes yes 0 0 0 0 11 0 1 67.625 67.625 2 0.035679 18929 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 58.981 42.508 306.88 56 0 0 384.93 0 286 56 0 0 368 0 1 1 0 0 1 0 47899 21607 2346 20791 50129 58127;58128 58127 2 VPVIVEK Unmodified 782.49019 0.49019038 1671;2661 P60521;B1AR50;Q8R3R8;Q9DCD6 Gabarapl2;Gabarap;Gabarapl1 Gamma-aminobutyric acid receptor-associated protein-like 2;Gamma-aminobutyric acid receptor-associated protein-like 1;Gamma-aminobutyric acid receptor-associated protein no no 0 0 0 0 9 0 1 59.317 59.317 2 0.042653 17525 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.496 36.517 138.51 57.882 115.93 0 0 108.73 130 65 111 0 0 102 1 1 1 0 0 1 11561 21608 1671;2661 20792 50130 58129 58129 1 VPVNLLR Unmodified 809.51232 0.51232281 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0 1 60.555 60.555 2 0.019555 16283 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.74 46.783 157.95 0 143.35 140.29 164.38 173.33 148 0 139 139 169 167 1 0 1 1 1 1 27660 21609 3204 20793 50131 58130 58130 1 VPVPDER Unmodified 810.42357 0.42356738 2999 Q9CZ30;B1AYJ9 Ola1 Obg-like ATPase 1 yes no 0 0 0 0 4 0 1 42.775 42.775 2 0.051925 12788 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.035 47.78 88.25 71.526 75.332 0 97.278 0 83 74 74 0 93 0 1 1 1 0 1 0 12166 21610 2999 20794 50132 58131 58131 1 VPVSELLLSYESSK Unmodified 1549.8239 0.8239397 2558 Q8CIV8 Tbce Tubulin-specific chaperone E yes yes 0 0 0 0 8 0 1 83.403 83.403 3 0.00066794 29648 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.394 44.013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21611 2558 20795 50133 58132 58132 1 VPVTYLELLS Unmodified 1132.638 0.63797683 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 0 0 0 10 2.16 1 1 1 97.927 97.927 2 0.0031841 35046 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.671 58.516 6.3531 26.015 9.358 30.061 43.091 0 6 25 9 28 42 0 1 2 1 2 3 0 26734 21612 533 20796 50134;50135;50136 58133;58134;58135;58136 58135 4 VPVVFVTNAGNILQHNK Unmodified 1849.021 0.021016799 2758 Q91WM2 Cecr5 Cat eye syndrome critical region protein 5 homolog yes yes 0 0 0 0 11.5 0.5 1 1 73.432 73.432 3 1.0627E-06 21570 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.88 81.049 0 68.073 65.005 27.85 0 69.29 0 65 65 28 0 65 0 2 2 1 0 2 9968.5 21613 2758 20797 50137;50138 58137;58138 58137 2 VPYSELGGK Unmodified 948.49165 0.49164694 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 0 13 0 1 55.182 55.182 2 0.0093456 18765 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 76.221 46.412 198.79 131.11 202.38 139.87 0 157.77 187 139 201 139 0 148 1 1 1 1 0 1 88145 21614 1553 20798 50139 58139 58139 1 VQAAQSEAK Unmodified 930.47706 0.47705951 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 6 0 1 35.686 35.686 2 0.010973 8650 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.173 38.817 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 1909.6 21615 2517 20799 50140 58140 58140 1 VQAASGENGGDAR Deamidation (N) 1231.5429 0.54290725 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 1 0 0 2.5 0.5 1 1 29.936 29.936 2 0.0044209 7047 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.498 73.813 30.006 7.5527 0 18.975 37.143 20.018 28 9 0 18 37 19 1 1 0 2 2 1 3639.4 21616 1910 20800 50141;50142 58141;58142 58141 780 2 VQAELDETK Unmodified 1031.5135 0.5135046 2945 Q9CQW1 Ykt6 Synaptobrevin homolog YKT6 yes yes 0 0 0 0 4 1 1 1 49.765 49.765 2 0.000892 15900 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.11 60.761 0 0 40.034 0 0 29.848 0 0 37 0 0 28 0 0 1 0 0 1 2128 21617 2945 20801 50143;50144 58143;58144 58144 2 VQAELEEAR Unmodified 1043.5247 0.52473799 182 A0A0R4J0Q5;P21619 Lmnb2 Lamin-B2 yes no 0 0 0 0 2.5 0.5 1 1 45.753 45.753 2 0.00040505 14309 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 126.55 67.86 169.13 27.776 44.7 228.41 92.359 29.848 158 28 46 213 93 28 3 1 1 3 1 1 22270 21618 182 20802 50145;50146 58145;58146;58147 58145 3 VQAENDFGKGPEPDTIIGYSGEDLPSAPR Unmodified 3058.452 0.45197356 2354 Q810U3 Nfasc Neurofascin yes yes 0 0 0 1 4 0 1 69.987 69.987 4 3.1711E-31 25352 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 92.412 86.048 29.742 27.324 27.655 19.119 0 0 28 28 28 19 0 0 1 1 1 1 0 0 13125 21619 2354 20803 50147 58148 58148 1 VQAILVNIFGGIMR Unmodified 1529.8752 0.87520418 3397 Q9Z2I9 Sucla2 Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial yes yes 0 0 0 0 13 0 1 105.12 105.12 3 0.055014 42810 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 32.734 14.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1078.2 21620 3397 20804 50148 58149 58149 1 VQAINVSSR Unmodified 972.53524 0.53524309 2510 Q8C845;Q9D8Y0 Efhd2 EF-hand domain-containing protein D2 yes no 0 0 0 0 7.5 0.5 1 1 43.077 43.077 2 0.030554 11312 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.064 15.343 0 0 138.58 46.791 67.99 0 0 0 130 46 65 0 0 0 2 1 1 0 11351 21621 2510 20805 50149;50150 58150;58151 58150 2 VQALEEANNDLENK Unmodified 1585.7584 0.75837933 661 CON__P35527 yes yes 0 0 0 0 4.5 0.5 1 1 63.377 63.377 3 5.5557E-05 22425 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.529 57.208 48.645 55.081 73.177 163.68 189.51 171.55 46 56 74 157 194 166 1 1 1 2 2 2 18189 + 21622 661 20806 50151;50152 58152;58153 58152 2 VQALEEANNDLENK Deamidation (N) 1586.7424 0.74239492 661 CON__P35527 yes yes 0 1 0 0 9.5 3.5 1 1 62.654 62.654 3 0.004199 22448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.328 26.5 197.68 164.36 0 0 186.04 217.49 185 167 0 0 185 209 1 1 0 0 1 1 8814.9 + 21623 661 20806 50153;50154 58154;58155 58155 193;194 2 VQALTTDISLIFAALK Unmodified 1702.9869 0.9869227 2265 Z4YJT3;Q6ZQ58 Larp1 La-related protein 1 yes no 0 0 0 0 11 0 1 113.92 113.92 3 0.0006624 36427 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 53.924 43.069 0 9.576 0 19.674 0 0 0 9 0 18 0 0 0 1 0 1 0 0 623.26 21624 2265 20807 50155 58156 58156 1 VQAMYIWVDGTGEGLR Unmodified 1793.8771 0.87705468 1383 P15105;D3YVK1;D3Z121 Glul Glutamine synthetase yes no 0 0 0 0 10 2.53 1 1 1 2 81.492 81.492 2;3 1.6106E-18 31443 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.22 67.276 30.044 139.03 223.91 100.54 239.81 232.23 28 134 213 97 241 222 1 4 4 3 6 5 160550 21625 1383 20808 50156;50157;50158;50159;50160 58157;58158;58159;58160;58161;58162;58163;58164;58165 58165 9 VQAQHDYTATDTDELQLK Unmodified 2074.9807 0.98072771 1157;2210 O08539;Q6P1B9 Bin1 Myc box-dependent-interacting protein 1 no no 0 0 0 0 6 3.58 1 1 2 1 54.692 54.692 3;4 7.9288E-47 18570 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 160.64 132.42 129.8 188.41 136.07 123.5 98.915 205.05 122 186 139 120 102 195 4 4 4 3 2 4 54568 21626 1157;2210 20809 50161;50162;50163;50164;50165 58166;58167;58168;58169;58170;58171 58167 6 VQAVDAVAAELAAEHYHDIK Unmodified 2149.0804 0.080382171 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 70.667 70.667 4 5.6184E-11 25686 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.8 65.519 39.284 58.383 141.97 106.22 98.175 105.93 37 56 139 102 102 102 1 1 2 1 2 2 23070 21627 2186 20810 50166;50167 58172;58173 58172 2 VQAVDAVAAELAAEHYHDIKR Unmodified 2305.1815 0.1814932 2186 Q68FG2 Sptbn2 yes yes 0 0 0 1 6.5 0.5 1 1 65.904 65.904 5 0.00013662 21966 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 49.592 33.286 49.087 68.251 99.974 135.76 77.619 86.263 46 65 102 131 83 83 1 1 2 2 2 2 10569 21628 2186 20811 50168;50169 58174;58175 58175 2 VQAVGTDEVR Unmodified 1072.5513 0.55128709 3114 Q9DB72 Btbd17 BTB/POZ domain-containing protein 17 yes yes 0 0 0 0 4.5 0.5 1 1 41.168 41.168 2 0.0071597 12070 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.808 38.856 0 38.575 47.458 0 0 0 0 37 46 0 0 0 0 1 1 0 0 0 4917 21629 3114 20812 50170;50171 58176;58177 58176 2 VQAVVAVAR Unmodified 911.55525 0.55525025 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 8 4.18 1 1 1 1 50.235 50.235 2 0.0010136 11745 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.29 14.828 153.16 212.18 181.17 245.39 220.02 164.28 144 204 176 236 224 158 3 2 3 3 2 1 97355 21630 2148 20813 50172;50173;50174;50175 58178;58179;58180;58181 58180 4 VQCCLYFIAPSGHGLKPLDIEFMK Unmodified 2822.3958 0.39578477 879 E9Q9F5;E9Q1G8;O55131 Sept7 Septin-7 yes no 0 0 0 1 10 1 1 1 82.446 82.446 4 1.0295E-05 25557 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 52.061 43.211 0 47.68 113.97 73.392 37.083 59.696 0 46 111 74 37 56 0 1 2 2 1 1 9861.7 21631 879 20814 50176;50177 58182;58183 58183 2 VQDDEVGDGTTSVTVLAAELLR Unmodified 2287.1543 0.15433498 1823 P80314;A0A1W2P7B7;A0A1W2P828;A0A1W2P6Q3;A0A1W2P871 Cct2 T-complex protein 1 subunit beta yes no 0 0 0 0 4.5 0.5 1 1 92.851 92.851 3;4 6.4211E-16 34111 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.883 82.719 0 5 0 18 0 0 0 5 0 18 0 0 0 1 0 1 0 0 5411.9 21632 1823 20815 50178;50179 58184;58185 58184 2 VQDEGISSGGK Unmodified 1075.5146 0.51456723 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 4.5 0.5 1 1 42.694 42.694 2 1.2751E-07 12800 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.52 69.237 0 70.224 0 60.354 45.382 29.336 0 66 0 56 47 28 0 2 0 2 2 1 5270.6 21633 3192 20816 50180;50181 58186;58187 58186 2 VQDEYSR Unmodified 895.40356 0.40356022 3216 Q9JIS5 Sv2a Synaptic vesicle glycoprotein 2A yes yes 0 0 0 0 5.5 4.39 1 1 1 1 32.918 32.918 2 1.2877E-15 8799 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 183.9 104.75 618.17 587.75 563.37 639.1 681.95 792.83 582 596 565 623 698 762 4 3 2 3 2 4 181700 21634 3216 20817 50182;50183;50184;50185 58188;58189;58190;58191 58189 4 VQDGGNPPR Unmodified 938.45699 0.45699277 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 8 5 1 1 27.888 27.888 2 0.0011593 6402 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 105.36 65.255 44.554 20.316 68.886 0 22.029 59.067 42 23 65 0 23 56 1 1 1 0 1 1 5400.1 21635 1018;2532 20818 50186;50187 58192;58193 58192 2 VQDHIASELLK Unmodified 1251.6823 0.68230126 2295 Q7TSJ2;A0A140LIT9 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 8.67 3.09 1 1 1 58.015 58.015 3 0.001866 19269 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.628 20.919 207.01 220.19 186.82 198.35 193.85 154.67 195 223 194 195 194 148 3 3 3 3 2 2 42221 21636 2295 20819 50188;50189;50190 58194;58195;58196 58194 3 VQDLGHGCIFLVQK Unmodified 1612.8395 0.83954696 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1 Tln2 Talin-2 yes no 0 0 0 0 8 0 1 66.628 66.628 3 0.00010603 21728 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.944 60.173 69.745 0 0 29.236 72.728 97.063 65 0 0 28 74 93 1 0 0 1 1 1 3455.9 21637 287 20820 50191 58197 58197 1 VQEAVEENR Unmodified 1072.5149 0.51490158 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 0 2.5 0.5 1 1 37.113 37.113 2 0.0017067 10723 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 98.943 59.941 0 28.808 58.864 0 29.288 0 0 28 56 0 28 0 0 1 1 0 1 0 5422.5 21638 583 20821 50192;50193 58198;58199 58199 2 VQEEFDIDMDAPETER Oxidation (M) 1938.8153 0.81530186 715 D3YXH0;P63054 Igsf5;Pcp4 Purkinje cell protein 4 yes no 0 0 1 0 1.5 0.5 1 1 60.436 60.436 3 4.1656E-05 19710 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 70.96 61.555 48.985 56.019 54.603 39.544 28.559 38.627 46 56 55 37 28 37 2 2 2 2 1 2 11998 21639 715 20822 50194;50195 58200;58201;58202 58200 39 3 VQEEFDIDMDAPETER Unmodified 1922.8204 0.82038724 715 D3YXH0;P63054 Igsf5;Pcp4 Purkinje cell protein 4 yes no 0 0 0 0 2 0.816 1 1 1 67.77 67.77 3 1.002E-05 22763 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 102.08 93.59 20.292 28.27 58.322 68.72 63.653 79.198 19 28 56 66 65 75 1 2 3 3 4 3 28141 21640 715 20822 50196;50197;50198 58203;58204;58205;58206;58207 58203 5 VQEIWQEFLAPGAPSAINLDSK Unmodified 2412.2325 0.23252572 2333 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 9.2 2.04 1 1 2 1 97.229 97.229 3;4 2.415E-06 39081 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.985 33.111 69.095 45.718 70.556 87.443 56.579 31.431 65 47 70 84 56 31 4 2 3 4 1 2 12156 21641 2333 20823 50199;50200;50201;50202;50203 58208;58209;58210;58211;58212 58212 5 VQENLLASGVDLVTYITR Unmodified 1990.0735 0.073505879 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 0 8 0.816 1 1 1 98.421 98.421 3 5.2356E-08 35247 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.84 64.813 0 28.728 0 20.234 47.922 29.29 0 27 0 19 47 28 0 3 0 1 2 2 11654 21642 3376 20824 50204;50205;50206 58213;58214;58215;58216 58214 4 VQENSPGHR Unmodified 1022.4894 0.48935553 519 A2ATI9;Q99JX3;A2ATI8;A2ATI6 Gorasp2 Golgi reassembly-stacking protein 2 yes no 0 0 0 0 4 0.816 1 1 1 20.481 20.481 3 0.00061667 2985 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.867 51.865 19.11 46.959 41.641 19.97 23.569 34.505 18 46 42 19 23 33 1 3 3 1 1 2 6047 21643 519 20825 50207;50208;50209 58217;58218;58219 58218 3 VQEQELK Unmodified 872.46035 0.46034682 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81;A0A0U1RNN9 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 9 4 1 1 43.601 43.601 2 0.024578 12843 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.01 24.336 59.729 0 60.291 0 0 49.036 56 0 56 0 0 46 1 0 1 0 0 1 11965 21644 2517 20826 50210;50211 58220;58221 58221 2 VQESADELQK Unmodified 1145.5564 0.55643205 1834 P84084 Arf5 ADP-ribosylation factor 5 yes yes 0 0 0 0 3.5 0.5 1 1 47.799 47.799 2 7.9041E-05 15183 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.83 24.568 99.617 0 28.939 28.176 37.408 49.036 93 0 28 28 37 46 2 0 1 1 1 1 8473.3 21645 1834 20827 50212;50213 58222;58223 58223 2 VQEVEVPEDFGPVR Unmodified 1598.794 0.79403655 953 E9QK48;D6RGM3;Q7TNG5 Eml2 Echinoderm microtubule-associated protein-like 2 yes no 0 0 0 0 3.5 0.5 1 1 66.295 66.295 3 2.3005E-05 23699 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.614 59.507 0 39.04 19.617 29.104 17.598 59.194 0 37 19 28 19 56 0 2 1 2 1 2 7518.3 21646 953 20828 50214;50215 58224;58225 58225 2 VQFGVVTR Unmodified 904.51305 0.51305109 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;B1ATY9 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 9 0 1 53.084 53.084 2 0.053767 14561 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.107 23.289 0 0 140.66 0 0 148.17 0 0 130 0 0 139 0 0 1 0 0 1 15757 21647 589 20829 50216 58226 58226 1 VQFLEQEVEEFVGK Unmodified 1679.8407 0.8406524 2553 Q8CI61 Bag4 BAG family molecular chaperone regulator 4 yes yes 0 0 0 0 5 0 1 99.437 99.437 3 0.0015783 35898 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 55.173 42.613 0 0 0 12.95 8.8191 0 0 0 0 12 9 0 0 0 0 1 1 0 423.53 21648 2553 20830 50217 58227 58227 1 VQFNHIAPLK Unmodified 1165.6608 0.66077796 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 9.5 0.5 1 1 56.462 56.462 3 0.0010781 16207 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.294 40.762 68.555 102.01 113.64 0 0 108.73 65 102 111 0 0 102 1 1 1 0 0 1 8897.5 21649 970 20831 50218;50219 58228;58229 58228 2 VQGEADDLEIK Unmodified 1215.5983 0.59829686 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 4 0 1 57.113 57.113 2 0.049798 19713 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.207 16.979 0 0 19.725 18.703 47.257 0 0 0 19 19 46 0 0 0 1 1 1 0 2940.9 21650 692 20832 50220 58230 58230 1 VQGLDTSEGLLLFGK Unmodified 1575.8508 0.85082315 278 G3UYW1;A0A1D5RLV7;Q6VNB8 Wdfy3 WD repeat and FYVE domain-containing protein 3 yes no 0 0 0 0 8 0 1 85.496 85.496 3 0.038815 30734 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.796 10.191 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 914.96 21651 278 20833 50221 58231 58231 1 VQGSDSDEEVVVATTR Unmodified 1690.801 0.80097243 3383 Q9Z1Q9;G3UY93 Vars Valine--tRNA ligase yes no 0 0 0 0 2 0 1 50.011 50.011 3 1.663E-05 16124 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.817 68.379 39.527 0 29.249 19.024 0 20.254 37 0 28 19 0 19 1 0 1 1 0 1 4566.8 21652 3383 20834 50222 58232 58232 1 VQGSITVR Unmodified 858.49232 0.49231565 3408 yes no 0 0 0 0 8 0 1 32.066 32.066 3 0.014828 5773 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 58.23 1.5089 524.98 436.37 484.49 281.31 825.39 717.32 494 451 486 298 825 695 1 1 1 1 1 1 452560 + 21653 3408 20835 50223 58233 58233 1 VQGVSFTALR Unmodified 1076.5978 0.59784335 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 9.5 0.5 1 1 60.362 60.362 2 5.7548E-07 18035 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 134.84 78.754 118.24 28.694 211.42 156.84 172.94 114.98 111 28 204 158 176 111 1 1 2 2 2 1 18869 21654 2438 20836 50224;50225 58234;58235 58234 2 VQHSNAK Unmodified 782.4035 0.40350064 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 7 0 1 23.457 23.457 3 0.047066 3407 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.127 31.396 0 14.269 37.498 37.7 26.887 19.487 0 14 37 37 28 19 0 1 1 1 1 1 781.33 21655 1400;1401 20837 50226 58236 58236 1 VQIAVANAQELLQR Unmodified 1551.8733 0.87328993 1708 P62075;A0A1W2P756 Timm13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 0 0 0 0 11 2 1 1 74.037 74.037 2;3 0.00010426 27947 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 91.307 67.276 0 0 0 29.584 54.232 86.93 0 0 0 28 56 83 0 0 0 1 1 1 6880 21656 1708 20838 50227;50228 58237;58238 58238 2 VQIEHISSLIK Unmodified 1265.7343 0.73433683 2369 Q8BG32;G3UYH2;G3UXL5 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 9 0 1 63.364 63.364 3 0.0054586 19488 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.557 29.707 79.08 63.828 0 0 77.404 0 74 65 0 0 74 0 1 1 0 0 1 0 8521.1 21657 2369 20839 50229 58239 58239 1 VQIIGLGTQVSQRPGAQALK Unmodified 2063.1851 0.18512201 2475 Q8BX70;A0A1L1SUY8 Vps13c Vacuolar protein sorting-associated protein 13C yes no 0 0 0 1 12 0 1 63.3 63.3 4 7.8998E-05 15406 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 52.045 42.515 59.473 54.621 57.015 0 0 54.366 56 56 56 0 0 51 1 1 1 0 0 1 4824.4 21658 2475 20840 50230 58240 58240 1 VQIPIMLVGNKK Unmodified 1338.8057 0.80572764 2798 Q921J2 Rheb GTP-binding protein Rheb yes yes 0 0 0 1 12 0 1 70.357 70.357 3 0.00057965 17878 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.159 60.305 158.8 0 0 0 94.662 76.183 148 0 0 0 93 74 1 0 0 0 1 1 6966.2 21659 2798 20841 50231 58241 58241 1 VQIQESVR Unmodified 957.52434 0.52434406 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 6 0 1 42.803 42.803 2 0.049563 11968 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.816 32.743 39.522 0 30.097 0 58.576 0 37 0 28 0 56 0 1 0 1 0 1 0 3222.9 21660 2671 20842 50232 58242 58242 1 VQLLQDLQDFFR Unmodified 1520.7987 0.798728 5 A0A087WNM1;Q91Z67;A0A087WNR5;A0A087WRV4 Srgap2 SLIT-ROBO Rho GTPase-activating protein 2 no no 0 0 0 0 10 0 1 101.54 101.54 2 0.031358 33001 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.292 23.778 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 1632.5 21661 5 20843 50233 58243 58243 1 VQLSGPQEAEK Unmodified 1184.6037 0.60371659 1269 O88543 Cops3 COP9 signalosome complex subunit 3 yes yes 0 0 0 0 5 0 2 48.898 48.898 2;3 0.0038647 15499 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.65 30.875 39.296 29.792 68.102 45.562 64.247 48.038 37 28 65 46 65 46 1 1 1 1 2 1 6210.2 21662 1269 20844 50234;50235 58244;58245 58245 2 VQLVGLDEESSEFICR Unmodified 1879.8986 0.89857798 1703 P61963 Dcaf7 DDB1- and CUL4-associated factor 7 yes yes 0 0 0 0 5 0 1 75.899 75.899 3 0.0038479 28162 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 45.618 33.909 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21663 1703 20845 50236 58246 58246 1 VQLVSIMK Unmodified 916.54157 0.54157402 3355 Q9Z0E0 Ncdn Neurochondrin yes yes 0 0 0 0 11.4 1.02 1 2 1 1 68.905 68.905 2;3 0.00019237 17382 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 157.86 97.709 533.53 409.39 692.68 583.91 976.11 463.42 503 416 682 570 975 440 4 3 4 5 3 3 134000 21664 3355 20846 50237;50238;50239;50240;50241 58247;58248;58249;58250;58251;58252;58253 58252 7 VQNVEDFVPEDGLDR Unmodified 1730.8111 0.81114318 2070 Q5U3K5 Rabl6 Rab-like protein 6 yes yes 0 0 0 0 3.5 0.5 1 1 69.049 69.049 2;3 0.00010045 25468 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 76.073 62.167 9.5402 20.216 19.637 19.597 18.867 49.564 9 19 19 19 19 47 1 1 1 1 1 2 5110.2 21665 2070 20847 50242;50243 58254;58255 58254 2 VQPIPELSELSR Unmodified 1366.7456 0.7456298 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 0 6 0 1 69.48 69.48 2 0.011108 24477 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.094 16.946 0 0 0 40.441 0 39.442 0 0 0 37 0 37 0 0 0 1 0 1 2651 21666 620 20848 50244 58256 58256 1 VQPIYGGTNEIMK Unmodified 1448.7334 0.73335055 162 A0A0R4J083;P51174 Acadl Long-chain specific acyl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 7 0 1 62.907 62.907 2 0.0051878 20643 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.353 35.235 20.292 18.848 0 20.767 0 9.594 19 19 0 19 0 9 1 1 0 1 0 1 1570.9 21667 162 20849 50245 58257 58257 1 VQPNEAVYTK Unmodified 1147.5873 0.58733824 1869 Q00612 G6pdx Glucose-6-phosphate 1-dehydrogenase X yes yes 0 0 0 0 6 0 1 48.702 48.702 2 0.0086523 14713 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.056 34.634 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21668 1869 20850 50246 58258 58258 1 VQPQQPLAQPQPPHK Unmodified 1691.9107 0.91073807 62 A0A0A6YWG7;E9QNQ4;Q8CHG7 Rapgef2 Rap guanine nucleotide exchange factor 2 yes no 0 0 0 0 7 0 1 45.969 45.969 4 0.051285 12717 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 31.389 10.436 48.852 35.15 55.289 66.174 83.778 0 46 37 56 65 83 0 1 1 1 1 1 0 2640.3 21669 62 20851 50247 58259 58259 1 VQPVLFNVGINEQQTLAER Unmodified 2154.1433 0.14331678 677 Q3UEQ1;E9Q9A0;F6V2U0;D3YUD3;D3YUL8;D3Z230;Q9EPW0;F6R4N2;A0A0R4J0Q2;E9QAD0;A0A0A6YXS5 Inpp4a Type I inositol 3,4-bisphosphate 4-phosphatase yes no 0 0 0 0 8 0 1 76.311 76.311 3 0.002889 26329 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 42.172 27.7 29.928 0 19.534 19.603 0 20.254 28 0 19 19 0 19 1 0 1 1 0 1 3023.4 21670 677 20852 50248 58260 58260 1 VQQLLHICSEHFDSK Unmodified 1839.8938 0.89376737 2697 Q8VDM4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes yes 0 0 0 0 8.5 0.5 1 1 61.206 61.206 4 0.0010137 19212 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 53.828 37.163 59.91 102.87 96.573 0 56.581 58.081 56 102 93 0 56 56 1 2 1 0 1 1 7095 21671 2697 20853 50249;50250 58261;58262 58261 2 VQQSSGPA Unmodified 772.37153 0.37153181 1707 P62073 Timm10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 0 5 0 1 32.599 32.599 2 0.042513 7644 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.682 54.777 59.862 44.908 0 0 0 59.696 56 46 0 0 0 56 1 1 0 0 0 1 6769 21672 1707 20854 50251 58263 58263 1 VQQSVAR Unmodified 786.4348 0.43480077 251 A0A1B0GRP7;Q9Z2Y8;A0A1B0GQY5;A0A1B0GRR5;Q6P8V7;Q80ZV3 Prosc Proline synthase co-transcribed bacterial homolog protein yes no 0 0 0 0 5.5 0.5 1 1 28.593 28.593 2 0.027561 5859 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.909 38.862 20.081 42.871 27.695 18.429 65.011 62.105 19 42 28 19 65 60 1 2 1 1 2 2 9070.9 21673 251 20855 50252;50253 58264;58265 58264 2 VQQTVQDLFGR Unmodified 1289.6728 0.67279921 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 71.486 71.486 2 6.2513E-08 23332 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 118.23 61.512 147.7 135.8 127.77 144.31 0 227.06 139 139 130 139 0 213 2 2 1 1 0 2 49459 21674 1533 20856 50254;50255 58266;58267 58267 2 VQSATHFK Unmodified 916.47667 0.47666558 2712 Q8VEJ9;P46467 Vps4a;Vps4b Vacuolar protein sorting-associated protein 4A;Vacuolar protein sorting-associated protein 4B yes no 0 0 0 0 8 0 1 39.12 39.12 3 0.032742 8816 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.794 14.716 78.828 0 96.534 82.928 108.34 115.23 74 0 93 83 111 111 1 0 1 1 1 1 5722.4 21675 2712 20857 50256 58268 58268 1 VQSAVITVPAYFNDSQR Unmodified 1893.9585 0.95847612 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 0 9 0 1 71.145 71.145 3 3.0241E-06 23239 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.707 63.632 0 58.665 54.978 47.001 0 39.442 0 56 56 46 0 37 0 1 1 1 0 1 5585.8 21676 1397 20858 50257 58269 58269 1 VQSFQMK Unmodified 866.43202 0.43202358 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 9 0 1 53.199 53.199 2 0.024931 14628 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 82.452 29.286 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21677 3174 20859 50258 58270 58270 1 VQSGNINAAK Unmodified 1000.5302 0.53015772 1827 P80318;E9Q133;Q3U0I3 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 6.5 0.5 1 1 40.757 40.757 2 3.1031E-05 10246 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.827 38.481 40.774 0 0 20.43 17.928 29.336 38 0 0 19 19 28 1 0 0 1 1 1 1295.2 21678 1827 20860 50259;50260 58271;58272 58272 2 VQSLCYLQLTR Unmodified 1379.7231 0.72312022 910 E9Q4P1 Wdfy1 yes yes 0 0 0 0 10 0 1 68.223 68.223 2 0.00026641 19689 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.067 58.346 78.707 87.614 42.521 0 57.094 112.43 74 88 42 0 56 107 2 2 1 0 1 2 6713.7 21679 910 20861 50261 58273;58274 58274 2 VQSLEGEK Unmodified 888.45526 0.45526144 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 8 3.56 1 1 1 47.104 47.104 2 0.004 14689 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 120.31 47.759 325.98 181.52 241.84 161.4 544.45 134.11 306 185 241 167 532 130 3 2 2 2 3 1 30165 21680 1382 20862 50262;50263;50264 58275;58276;58277 58275 3 VQSLQDEVAFLR Unmodified 1403.7409 0.74087877 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 9.2 3.25 1 1 1 2 73.36 73.36 2;3 1.1604E-13 27513 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 130.16 94.622 69.487 65.714 85.976 67.608 93.183 145.27 65 65 84 65 93 139 2 2 2 2 2 3 67805 21681 154 20863 50265;50266;50267;50268;50269 58278;58279;58280;58281;58282 58282 5 VQSSGAHDQR Unmodified 1083.5057 0.50573388 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 4.5 0.5 1 1 17.213 17.213 3 2.9336E-12 2418 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 166.87 143.45 3.1824 5.0746 1.8435 10 6.0623 6.223 3 5 2 10 6 6 1 1 1 1 1 1 2666.6 21682 1854 20864 50270;50271 58283;58284 58283 2 VQSTGEGEAQR Unmodified 1160.5422 0.54217896 2010 Q3UVG3 Fam91a1 Protein FAM91A1 yes yes 0 0 0 0 3 0 1 27.277 27.277 2 0.0030166 6153 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 74.841 54.321 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 1580.2 21683 2010 20865 50272 58285 58285 1 VQSVEQIR Unmodified 957.52434 0.52434406 114 A0A0J9YU62;O88712;A0A0J9YUM4;A0A0J9YTW3;Q91YZ2;P56546;E9PWQ9;E9Q0T4 Ctbp1;Ctbp2 C-terminal-binding protein 1;C-terminal-binding protein 2 yes no 0 0 0 0 9 4 1 1 43.364 43.364 2 0.015019 12922 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.368 30.614 177.46 251.5 151.82 280.5 179.57 182.49 167 250 158 268 186 176 1 2 1 2 1 1 42218 21684 114 20866 50273;50274 58286;58287 58286 2 VQTANEVK Unmodified 887.47125 0.47124585 2139 Q61768 Kif5b Kinesin-1 heavy chain yes yes 0 0 0 0 6 0 1 39.411 39.411 2 0.055031 10392 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.593 12.533 59.861 0 38.071 37.299 46.403 0 56 0 37 37 46 0 1 0 1 1 1 0 3125.4 21685 2139 20867 50275 58288 58288 1 VQTASGQR Unmodified 845.43553 0.43552905 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 6 0.816 1 1 1 23.412 23.412 2 0.0012924 3550 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.04 85.952 48.688 140.67 44.725 43.294 92.718 77.951 46 136 46 40 92 75 1 3 1 2 2 2 23745 21686 144 20868 50276;50277;50278 58289;58290;58291 58290 3 VQVALEELQDLK Unmodified 1383.7609 0.76094551 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 84.97 84.97 3 2.224E-05 30997 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.011 51.61 39.564 85.933 74.353 37.678 19.197 19.706 37 84 74 37 19 19 1 3 2 1 1 1 19770 21687 3204 20869 50279;50280;50281;50282 58292;58293;58294;58295 58294 4 VQVALGNIASK Unmodified 1098.6397 0.63970816 3367 Q9Z0Y1;E9Q919 Dctn3 Dynactin subunit 3 yes no 0 0 0 0 10 0.816 1 1 1 63.538 63.538 2;3 2.4071E-06 19688 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.345 28.121 118.47 0 106.1 82.319 147.38 56.546 111 0 102 83 148 56 1 0 1 1 2 1 17650 21688 3367 20870 50283;50284;50285 58296;58297;58298 58296 3 VQVEYKGETK Unmodified 1179.6136 0.61355299 1762 P63017;Q504P4;D3Z5E2 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 7.83 2.41 2 2 1 1 45.534 45.534 3;4 0.0002992 12505 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 93.345 74.981 1438 1613.7 2053 1273 1347.2 2273.7 1357 1640 2034 1261 1395 2169 4 6 5 5 5 6 180210 21689 1762 20871 50286;50287;50288;50289;50290;50291 58299;58300;58301;58302;58303;58304 58301 6 VQVNHEK Deamidation (N) 853.42938 0.42938104 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 1 0 0 5.5 0.5 1 1 34.245 34.245 3 0.020588 8429 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.313 41.421 177.48 133.01 174.84 150.77 88.705 224.53 167 139 176 149 93 213 2 2 2 2 1 2 11751 21690 1055 20872 50292;50293 58305;58306 58305 279 2 VQVNHEK Unmodified 852.44537 0.44536545 1055 G3UVV4;P17710;D3YYR4;D3Z365 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 8 2.92 2 1 1 30.503 30.503 2;3 0.0023067 6695 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.29 60.086 193.19 531.57 34.398 606.88 460.69 606.01 181 509 32 562 475 579 3 3 1 2 2 3 104750 21691 1055 20872 50294;50295;50296;50297 58307;58308;58309;58310 58310 4 VQVSVFK Unmodified 805.46979 0.46978929 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 10.3 0.471 2 1 59.669 59.669 2;3 0.010667 15405 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 121.62 62.414 299.25 236.28 0 281.75 478.09 333.23 280 236 0 266 479 328 2 1 0 2 2 3 28858 21692 1393 20873 50298;50299;50300 58311;58312;58313 58313 3 VQVTSQEYSAR Unmodified 1266.6204 0.62042929 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 41.391 41.391 2;3 5.1003E-26 11915 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 184.9 124.31 206.34 230.31 156.7 83.21 135.89 262.62 194 232 157 84 139 250 3 4 3 2 2 3 49143 21693 1362 20874 50301;50302;50303;50304 58314;58315;58316;58317 58317 4 VQVVVTVLDYDK Unmodified 1376.7551 0.75513185 1553;223 A0A0R4J2C2;P46097;P46096 Syt2;Syt1 Synaptotagmin-2;Synaptotagmin-1 no no 0 0 0 0 9.43 1.92 1 2 1 1 1 1 80.526 80.526 2;3 1.6652E-20 28286 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 158.4 88.343 158.8 238.46 172.09 267.75 27.237 148.46 149 232 167 251 28 140 3 4 2 4 1 3 79824 21694 223;1553 20875 50305;50306;50307;50308;50309;50310;50311 58318;58319;58320;58321;58322;58323;58324;58325 58319 8 VQVYQEPNR Unmodified 1131.5673 0.5672715 2671 Q8R574 Prpsap2 Phosphoribosyl pyrophosphate synthase-associated protein 2 yes yes 0 0 0 0 5.5 0.5 1 1 41.222 41.222 2 0.016708 11225 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.993 46.465 69.24 44.867 46.834 30.604 33.472 0 65 46 46 28 32 0 2 1 1 1 1 0 12302 21695 2671 20876 50312;50313 58326;58327 58327 2 VQWYPEGVK Unmodified 1104.5604 0.56039521 2262 Q6ZPJ3 Ube2o E2/E3 hybrid ubiquitin-protein ligase UBE2O yes yes 0 0 0 0 8 0 1 63.191 63.191 2 0.0032071 20069 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.584 36.034 39.701 0 0 49.219 56.315 0 37 0 0 46 56 0 1 0 0 1 1 0 4818.6 21696 2262 20877 50314 58328 58328 1 VQYPQSQACK Unmodified 1207.5656 0.56555694 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 7.5 0.5 1 1 42.686 42.686 3 0.00043367 11158 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.898 53.023 59.531 34.274 134.91 76.238 42.276 127.78 56 37 130 74 46 121 1 1 2 1 1 2 6820.5 21697 3204 20878 50315;50316 58329;58330 58329 2 VQYTLPDGSTLDVGPAR Unmodified 1787.9054 0.90537792 2672 Q8R5C5 Actr1b Beta-centractin yes yes 0 0 0 0 8.67 3.09 1 1 1 70.638 70.638 2;3 5.5539E-06 24328 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.636 66.312 79.662 132.49 128.05 95.695 130.96 77.798 75 130 130 93 130 75 2 2 3 2 2 2 21732 21698 2672 20879 50317;50318;50319 58331;58332;58333 58332 3 VREEEIEVDSR Unmodified 1359.663 0.66302238 361 A0A286YDA2;A0A286YDT3;E9Q5C9;A0A286YDV7 Nolc1 yes no 0 0 0 1 1 0 1 39.515 39.515 3 0.0023902 10968 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.641 51.416 19.88 57.637 36.291 28.441 0 0 19 56 38 28 0 0 1 1 1 1 0 0 8291.2 21699 361 20880 50320 58334 58334 1 VREEYPDR Unmodified 1062.5094 0.50942227 3183 Q9ERD7 Tubb3 Tubulin beta-3 chain yes yes 0 0 0 1 5.75 4.32 1 1 1 1 29.892 29.892 3 0.0015636 7358 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 127.68 81.663 1527.3 1012 1595.9 1353.7 2018 1670.1 1437 1050 1581 1351 2039 1619 5 2 3 4 4 4 475050 21700 3183 20881 50321;50322;50323;50324 58335;58336;58337;58338;58339 58336 5 VRLDDDDEGVPSSALR Unmodified 1742.8435 0.84350594 78 A0A0G2JDL3;P49615 Cdk5 Cyclin-dependent-like kinase 5 yes no 0 0 0 1 4 0 1 52.757 52.757 3 0.0011838 17496 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.734 48.242 49.358 0 0 0 77.404 0 46 0 0 0 74 0 1 0 0 0 1 0 10177 21701 78 20882 50325 58340 58340 1 VRPAELEQFESTIGFK Unmodified 1849.9574 0.95741349 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 1 6.5 0.5 1 1 74.753 74.753 4 0.00056075 26060 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.097 40.434 79.966 46.199 46.385 29.056 0 59.696 75 47 47 28 0 56 2 1 2 1 0 2 5772.7 21702 1250 20883 50326;50327 58341;58342 58342 2 VRPCVVYGGAEIGQQIR Unmodified 1900.9942 0.99415012 2146 Q62167 Ddx3x ATP-dependent RNA helicase DDX3X yes yes 0 0 0 1 8 0 1 53.924 53.924 3 0.00070917 15698 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.361 32.353 0 29.792 0 0 57.278 37.808 0 28 0 0 56 37 0 1 0 0 1 1 3997.6 21703 2146 20884 50328 58343 58343 1 VRPFAVAAVLR Unmodified 1197.7346 0.7346116 3329 Q9WUA2;A0A087WS80;A0A087WPV4 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 1 6.5 5.5 1 1 59.867 59.867 3 2.6809E-08 13913 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 125.74 90.982 556.87 581.37 592.29 353.53 520.03 451.24 525 591 584 349 524 436 7 7 5 5 6 6 34147 21704 3329 20885 50329;50330 58344;58345;58346;58347;58348;58349;58350 58347 7 VSADEDLK Unmodified 875.42363 0.42362696 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 4 0 1 46.895 46.895 2 0.037463 14771 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.735 8.935 0 97.205 104.53 0 0 99.138 0 93 102 0 0 93 0 1 1 0 0 1 5096.5 21705 2225 20886 50331 58351 58351 1 VSADNTVGR Unmodified 917.45666 0.45665842 3143 Q9DCH4 Eif3f Eukaryotic translation initiation factor 3 subunit F yes yes 0 0 0 0 4.5 0.5 1 1 32.784 32.784 2 0.0044782 8103 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.67 52.582 78.846 0 93.464 127.55 82.005 0 74 0 92 120 84 0 2 0 2 1 2 0 7009.8 21706 3143 20887 50332;50333 58352;58353 58352 2 VSAEGEAR Unmodified 817.393 0.39299553 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 0 6 4.97 1 1 1 27.413 27.413 2 0.001228 6059 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.26 59.116 275.52 263.6 177.95 184.47 220.18 134.16 259 268 176 176 223 130 3 3 2 2 2 1 143270 21707 1382 20888 50334;50335;50336 58354;58355;58356 58354 3 VSAFENPYVDAIK Unmodified 1451.7296 0.72964538 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 8.67 3.09 1 1 1 73.573 73.573 2;3 3.5477E-13 27633 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.82 90.404 158.18 33.154 76.882 37.299 151.08 58.649 148 38 74 37 148 56 3 2 2 1 3 1 36605 21708 1428 20889 50337;50338;50339 58357;58358;58359 58359 3 VSALDLAVLDQVEAR Unmodified 1597.8675 0.86753585 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 7.6 2.8 1 1 2 1 82.856 82.856 2;3 2.1435E-16 29996 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.71 91.403 59.799 36.098 18.023 108 92.512 19.745 56 38 19 103 93 19 2 2 1 4 3 1 27335 21709 2844 20890 50340;50341;50342;50343;50344 58360;58361;58362;58363;58364;58365 58364 6 VSALEEELAAANQEIVALR Unmodified 2025.0742 0.074234161 639 F7CYX4;B8QI34;Q8BSS9 Ppfia2 Liprin-alpha-2 yes no 0 0 0 0 4.5 0.5 1 1 92.545 92.545 3 3.4979E-05 34076 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.41 30.381 0 6.1731 12.614 0 18.297 15.468 0 6 12 0 18 15 0 1 1 0 2 2 1924.2 21710 639 20891 50345;50346 58366;58367 58366 2 VSALIQK Unmodified 757.46979 0.46978929 2626 Q8R016;E9Q6V3;E9PZH4 Blmh Bleomycin hydrolase yes no 0 0 0 0 11.3 1.25 1 1 1 57.059 57.059 2 0.027111 14363 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 91.041 31.836 422.2 303.75 557.87 403.1 562.94 311.68 398 321 551 407 571 301 2 2 2 2 3 1 62573 21711 2626 20892 50347;50348;50349 58368;58369;58370 58369 3 VSALNVLQDLGLFGLYK Unmodified 1849.0349 0.034935528 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 11.5 0.5 1 1 109.29 109.29 3 6.2885E-13 35703 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.36 97.496 71.772 27.675 13.709 12.175 6.5861 14.736 69 29 14 12 7 14 3 2 1 1 1 2 19029 21712 2396 20893 50350;50351 58371;58372;58373;58374 58372 4 VSAPPSAASTFSR Unmodified 1276.6412 0.64116473 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 6.5 0.5 1 1 48.296 48.296 2 0.0006904 13675 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.327 44.165 30.044 18.733 88.682 0 0 69.29 28 19 83 0 0 65 1 1 1 0 0 2 7762.9 21713 894 20894 50352;50353 58375;58376 58376 2 VSASPLLYTLMGK Unmodified 1378.753 0.75302336 2153 Q62351 Tfrc Transferrin receptor protein 1 yes yes 0 0 0 0 6.5 5.5 1 1 87.1 87.1 2;3 0.00020433 24412 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.089 43.303 49.273 22.214 0 39.925 32.359 9.454 46 24 0 37 33 9 1 2 0 1 2 1 4402.7 21714 2153 20895 50354;50355 58377;58378 58378 2 VSAVPTEAPEVAK Unmodified 1296.6925 0.6925316 1121 H3BJZ7;Q4KUS2;H3BJL3 Unc13a Protein unc-13 homolog A yes no 0 0 0 0 5 0 1 55.635 55.635 3 8.7615E-05 18670 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.324 56.451 0 38.773 35.593 47.47 36.521 0 0 37 37 46 37 0 0 1 1 1 1 0 4258.7 21715 1121 20896 50356 58379 58379 1 VSCFSNIK Unmodified 953.46405 0.46405199 713 D3YXA8;Q8R3L5 Slco3a1 Solute carrier organic anion transporter family member 3A1 yes no 0 0 0 0 13 0 1 53.07 53.07 3 0.055415 17783 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.109 4.9177 0 105.86 159.3 119.13 134.97 144.32 0 102 158 120 139 139 0 1 1 1 1 1 9169.5 21716 713 20897 50357 58380 58380 1 VSCLGVTDDGMAVATGSWDSFLK Unmodified 2415.1086 0.10864711 1751;1750 P62880;E9QKR0;D3YZX3;E9PWM7;P62874 Gnb2;Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 0 0 9.33 2.71 1 2 2 1 3 91.184 91.184 3;4 1.7207E-18 34440 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.37 90.832 193.09 100.19 240.12 167.23 200.89 254.37 181 102 233 163 203 244 5 2 7 7 6 8 111520 21717 1751;1750 20898 50358;50359;50360;50361;50362;50363;50364;50365;50366 58381;58382;58383;58384;58385;58386;58387;58388;58389 58381 9 VSCLGVTDDGMAVATGSWDSFLK Oxidation (M) 2431.1036 0.10356173 1751;1750 P62880;E9QKR0;D3YZX3;E9PWM7;P62874 Gnb2;Gnb1 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 no no 0 0 1 0 13 0 1 85.035 85.035 3 3.3053E-09 33296 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.589 48.28 29.904 27.776 0 0 0 29.848 28 28 0 0 0 28 1 1 0 0 0 1 2230.6 21718 1751;1750 20898 50367 58390 58390 133 1 VSDAISTQYPVVDHEFDAVVVGAGGAGLR Unmodified 2928.4618 0.46175038 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 6.75 3.63 1 2 1 79.811 79.811 3;4 7.5127E-26 30061 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.02 66.832 88.665 17.847 97.918 94.976 19.874 89.544 83 18 94 93 19 84 3 2 2 4 1 3 21527 21719 2597 20899 50368;50369;50370;50371 58391;58392;58393;58394;58395 58392 5 VSDCTPAVEKPVSDADASEPS Unmodified 2159.9529 0.95285798 519 A2ATI9;Q99JX3 Gorasp2 Golgi reassembly-stacking protein 2 yes no 0 0 0 1 4 0 1 54.409 54.409 3 0.0018309 18416 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 43.946 35.452 0 29.344 26.828 38.324 27.528 0 0 28 28 37 28 0 0 1 1 1 1 0 3531.7 21720 519 20900 50372 58396 58396 1 VSDDEYTK Unmodified 955.41346 0.4134562 2054 Q5PR72;Q922S4;A0A1B0GRJ9;F7D3W5 Pde2a cGMP-dependent 3',5'-cyclic phosphodiesterase yes no 0 0 0 0 4.5 0.5 1 1 43.123 43.123 2 0.012807 12941 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 88.37 54.819 89.415 27.776 97.032 113.17 125.82 144.58 84 28 93 111 130 139 2 1 1 2 2 2 9878.3 21721 2054 20901 50373;50374 58397;58398 58397 2 VSDEVGFGLEHVSR Unmodified 1529.7474 0.74742071 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 4 0 1 57.028 57.028 3 0.0016061 19571 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.912 37.545 0 0 0 60.418 41.977 97.94 0 0 0 56 46 93 0 0 0 1 1 1 4553.1 21722 2594 20902 50375 58399 58399 1 VSDLLLSTDER Unmodified 1246.6405 0.64049603 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 6 0 1 66.573 66.573 3 0.0054736 23119 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.528 12.339 0 0 30.296 0 19.874 0 0 0 28 0 19 0 0 0 1 0 1 0 1922.7 21723 1412 20903 50376 58400 58400 1 VSEAEPR Unmodified 786.38718 0.38718187 2777 Q91YR5 Mettl13 Methyltransferase-like protein 13 yes yes 0 0 0 0 3 0 1 28.654 28.654 2 0.052604 6756 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 75.854 0 48.829 25.373 67.377 26.588 0 0 46 28 65 28 0 0 1 1 1 1 0 0 5765.4 21724 2777 20904 50377 58401 58401 1 VSEAIEK Unmodified 774.41233 0.41233399 1654 P58389 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 0 5 0 1 46.726 46.726 2 0.028698 14345 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.323 18.901 99.426 72.032 0 49.042 65.737 0 93 74 0 46 65 0 1 1 0 1 1 0 11569 21725 1654 20905 50378 58402 58402 1 VSEEAESQQWDTSK Unmodified 1622.706 0.70600941 2148 Q62261 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes yes 0 0 0 0 4 0 1 51.81 51.81 3 6.2942E-05 17136 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.98 74.324 69.468 54.9 0 60.031 62.585 77.098 65 56 0 56 65 74 1 1 0 1 1 1 11646 21726 2148 20906 50379 58403 58403 1 VSEGPRPFAPVFFQSDDK Unmodified 2021.9847 0.98469087 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 1 8 0 1 68.997 68.997 4 9.5932E-05 22903 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.096 38.941 88.307 71.685 65.584 0 0 69.29 83 74 65 0 0 65 1 1 1 0 0 1 5157.1 21727 1424 20907 50380 58404 58404 1 VSEHSSPEEEASPHQR Unmodified 1804.7976 0.79761838 2088 Q60829 Ppp1r1b Protein phosphatase 1 regulatory subunit 1B yes yes 0 0 0 0 1.5 0.5 1 1 26.303 26.303 4 4.6356E-12 5008 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.63 105.56 79.806 43.362 75.644 56.165 28.409 0 75 47 75 56 28 0 2 2 2 2 1 0 12270 21728 2088 20908 50381;50382 58405;58406 58405 2 VSELFDK Unmodified 836.42798 0.42798405 2225 Q6P8X1;A0A1W2P701 Snx6 Sorting nexin-6;Sorting nexin-6, N-terminally processed yes no 0 0 0 0 7 0 1 65.585 65.585 2 0.033776 21873 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.265 22.303 87.954 100.92 100.18 82.636 112.31 0 83 102 102 83 111 0 1 1 1 1 1 0 5588.7 21729 2225 20909 50383 58407 58407 1 VSELHLEVK Unmodified 1052.5866 0.58660996 3350 Q9WVE8;Q3UP40;A0A2R8W750 Pacsin2 Protein kinase C and casein kinase substrate in neurons protein 2 yes no 0 0 0 0 6 0 1 55.329 55.329 3 0.01496 17896 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.461 27.872 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21730 3350 20910 50384 58408 58408 1 VSELKEELK Unmodified 1073.5968 0.5968403 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 1 7 0 1 59.386 59.386 3 0.013719 18933 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.076 25.354 0 0 124.44 121.24 133.18 193.41 0 0 120 120 139 185 0 0 1 1 1 1 10814 21731 2714 20911 50385 58409 58409 1 VSEPEAIDQPDVVQR Unmodified 1680.8319 0.83187862 314 A0A1N9M5I8;Q3UGY8 Arfgef3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 yes no 0 0 0 0 2 0 1 53.278 53.278 3 5.1071E-05 17583 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 95.195 81.449 9.4235 38.624 6.514 19.286 0 20.254 9 37 9 18 0 19 1 1 1 1 0 1 3498.6 21732 314 20912 50386 58410 58410 1 VSEQGLIEILEK Unmodified 1356.75 0.75004648 1645 P56812;D3Z7Q5 Pdcd5 Programmed cell death protein 5 yes no 0 0 0 0 7 0 1 83.935 83.935 3 0.0087328 30502 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.527 12.79 39.613 17.545 0 30.604 0 39.442 37 19 0 28 0 37 1 1 0 1 0 1 3619.2 21733 1645 20913 50387 58411 58411 1 VSEQTLQSASSK Unmodified 1263.6307 0.63065962 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 47.733 47.733 3 2.554E-06 14342 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 102.87 50.625 108.34 109.24 239.26 104.73 135.3 281.83 102 111 232 102 139 268 1 1 3 1 2 3 28951 21734 927 20914 50388;50389;50390;50391 58412;58413;58414;58415 58413 4 VSEVKPTYR Unmodified 1077.5819 0.58185894 1542 P42669 Pura Transcriptional activator protein Pur-alpha yes yes 0 0 0 1 7.5 0.5 1 1 40.881 40.881 3 0.00084022 9567 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.01 73.948 492.49 809.64 881.34 880.75 1170.1 1085.9 464 806 898 874 1193 1050 1 2 2 2 2 2 75497 21735 1542 20915 50392;50393 58416;58417 58417 2 VSFELFADK Unmodified 1054.5335 0.53351176 1404 P17742;V9GXC1;V9GX31 Ppia;Gm12728 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 0 9.5 1.94 1 2 2 1 1 1 77.461 77.461 2;3 1.0912E-06 29326 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.56 91.179 1794.9 1777.1 1833.9 1570.6 2193.8 1566.3 1688 1799 1839 1570 2209 1513 12 11 10 10 8 9 628890 21736 1404 20916 50394;50395;50396;50397;50398;50399;50400;50401 58418;58419;58420;58421;58422;58423;58424;58425;58426;58427;58428;58429;58430 58429 13 VSFELFADKVPK Unmodified 1378.7497 0.74965254 1404 P17742;V9GXC1;V9GX31 Ppia;Gm12728 Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed yes no 0 0 0 1 10 0.816 1 1 1 74.192 74.192 3 5.3438E-05 21917 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.551 57.396 271.59 1155.5 242.6 784.92 921.45 1358.4 255 1107 236 732 960 1299 2 4 2 2 4 4 358210 21737 1404 20917 50402;50403;50404 58431;58432;58433;58434 58434 4 VSFLKPLTR Unmodified 1059.6441 0.64406526 2188 Q68FM6 Elfn2 Protein phosphatase 1 regulatory subunit 29 yes yes 0 0 0 1 1 0 1 62.109 62.109 3 0.011288 20588 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 66.595 39.993 127.01 176.29 144.41 101.23 87.625 145.67 120 176 148 102 93 139 1 1 1 1 1 1 15409 21738 2188 20918 50405 58435 58435 1 VSFYQLSHFLQCK Unmodified 1655.813 0.81299786 1242 O55143 Atp2a2 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 yes yes 0 0 0 0 12 0 1 79.123 79.123 3 0.0024615 21401 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.569 38.652 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21739 1242 20919 50406 58436 58436 1 VSGELFAQAPVEQYPGIAVETVTDSSR Unmodified 2849.4083 0.40831783 2960 Q9CR95 Necap1 Adaptin ear-binding coat-associated protein 1 yes yes 0 0 0 0 7.2 2.99 2 1 1 1 83.966 83.966 3;4 1.548E-24 31855 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.11 93.432 3.204 30.976 0 9.6683 20.142 3.0219 3 31 0 9 20 3 1 3 0 1 3 1 28344 21740 2960 20920 50407;50408;50409;50410;50411 58437;58438;58439;58440;58441;58442 58437 6 VSGELQR Unmodified 787.41882 0.41881635 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 0 5 0 1 35.148 35.148 2 0.034462 8809 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 82.716 9.0792 0 135.54 166.41 138.15 205.29 142.32 0 130 167 139 207 139 0 1 1 1 1 1 15379 21741 3101 20921 50412 58443 58443 1 VSGGTAVFITGK Unmodified 1135.6237 0.62372375 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 9 0 1 61.743 61.743 2 5.9249E-05 18753 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.113 51.666 0 0 37.895 48.019 0 0 0 0 37 46 0 0 0 0 1 1 0 0 2754.8 21742 2841 20922 50413 58444 58444 1 VSGLAGSIYR Unmodified 1021.5556 0.55564418 2039;917 Q58A65;E9Q6B6;E9Q6E0;J3QNR6;K3W4S4;Q9ESN9 Spag9;Mapk8ip3 C-Jun-amino-terminal kinase-interacting protein 4;C-Jun-amino-terminal kinase-interacting protein 3 no no 0 0 0 0 9 0 1 55.315 55.315 2 0.04494 15669 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.089 17.456 0 88.312 0 78.943 103.07 0 0 83 0 74 102 0 0 1 0 1 1 0 7601.7 21743 2039;917 20923 50414 58445 58445 1 VSGNQHEELQNVR Unmodified 1508.7332 0.73316763 2398 Q8BH66 Atl1 Atlastin-1 yes yes 0 0 0 0 4.5 0.5 1 1 33.91 33.91 3 8.5852E-05 8646 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.202 60.546 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 5233 21744 2398 20924 50415;50416 58446;58447 58446 2 VSGSELVQK Unmodified 945.51311 0.51311067 1713 Q8K1K2;P62196 Psmc5 26S protease regulatory subunit 8 yes no 0 0 0 0 6.5 0.5 1 1 49.783 49.783 2;3 0.0027555 15236 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 93.598 29.177 88.638 83.399 0 78.295 137.54 124 83 84 0 74 139 120 1 1 0 2 2 2 7190.4 21745 1713 20925 50417;50418 58448;58449 58448 2 VSGSPSSGFR Unmodified 979.47231 0.47230849 154 A0A0R4J036;P08553;D3YZ35 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.5 2.69 1 1 1 1 38.659 38.659 2 9.2929E-22 10090 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 187.82 147.61 557.78 259.24 351.48 374.17 261.58 347.51 523 273 343 366 268 333 4 3 3 4 2 3 93801 21746 154 20926 50419;50420;50421;50422 58450;58451;58452;58453 58450 4 VSGSQIVDIDK Unmodified 1159.6085 0.60846762 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 0 6 0 1 58.75 58.75 2 0.0066942 19501 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.091 23.382 39.701 0 0 0 0 49.036 37 0 0 0 0 46 1 0 0 0 0 1 2868.7 21747 1671 20927 50423 58454 58454 1 VSGSQIVDIDKR Unmodified 1315.7096 0.70957864 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 1 6 0 1 51.084 51.084 3 0.0022098 15878 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 61.167 26.475 0 0 58.593 44.88 101.32 96.247 0 0 56 46 102 93 0 0 1 1 1 1 5772.1 21748 1671 20928 50424 58455 58455 1 VSGTLETK Unmodified 833.44945 0.44944778 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5;D3YUN8 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 45.193 45.193 2;3 0.0033722 12348 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.438 30.399 562.17 298.87 645.86 628.99 364.38 340.85 528 316 642 611 380 327 4 4 6 5 4 3 55690 21749 2096 20929 50425;50426;50427;50428;50429 58456;58457;58458;58459;58460;58461;58462 58460 7 VSHALAEGLGVIACIGEK Unmodified 1822.9611 0.96111866 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 9.6 1.69 1 2 2 2 2 1 81.341 81.341 2;3;4 1.3101E-26 28021 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 140.26 119.16 575.23 612.89 954.45 770.22 908.38 806.66 540 604 930 751 909 774 12 11 14 14 12 11 193210 21750 1405 20930 50430;50431;50432;50433;50434;50435;50436;50437;50438;50439 58463;58464;58465;58466;58467;58468;58469;58470;58471;58472;58473;58474;58475;58476;58477;58478;58479;58480;58481;58482;58483;58484 58472 22 VSHEENQHLQLTIQALQDELR Unmodified 2500.267 0.26701374 2249 Q6PH08;A0A1B0GS69 Erc2 ERC protein 2 yes no 0 0 0 0 5.5 0.5 1 1 68.517 68.517 4 6.5126E-10 24817 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.193 58.754 0 107.86 103.87 24.891 66.847 39.442 0 103 103 28 65 37 0 2 2 1 1 1 5286.9 21751 2249 20931 50440;50441 58485;58486 58485 2 VSHIEDPALIR Unmodified 1248.6826 0.68263561 2920 Q9CQC7 Ndufb4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 0 0 0 0 4 0 1 49.424 49.424 3 7.9331E-06 15965 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.92 82.382 48.799 44.717 56.01 37.103 0 59.696 46 46 56 37 0 56 1 1 1 1 0 1 10766 21752 2920 20932 50442 58487 58487 1 VSHKPSGLVMAR Unmodified 1280.7023 0.7023252 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 1 11 1 1 1 39.334 39.334 4 5.4032E-05 7467 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.356 68.797 256.08 126.71 314.62 145.78 86.818 186.55 241 134 305 144 83 175 2 1 2 1 1 1 21070 21753 1500 20933 50443;50444 58488;58489 58488 2 VSHLLGINVTDFTR Unmodified 1570.8467 0.84674083 2696 Q8VDD5 Myh9 Myosin-9 yes yes 0 0 0 0 10 0 1 70.99 70.99 3 6.8175E-05 20972 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.633 69.214 69.072 33.29 84.959 56.144 0 78.884 65 37 83 56 0 74 1 1 1 1 0 1 13876 21754 2696 20934 50445 58490 58490 1 VSHVSTGGGASLELLEGK Unmodified 1739.9054 0.90537792 1334 P09411;P09041 Pgk1;Pgk2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 yes no 0 0 0 0 6.5 3.91 1 1 1 1 59.974 59.974 3 2.2916E-19 20151 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.25 104.04 248.41 29.329 115.62 204.01 214.41 300.89 232 28 112 195 222 288 3 1 3 3 2 3 46958 21755 1334 20935 50446;50447;50448;50449 58491;58492;58493;58494 58492 4 VSHYIINSLPNRR Unmodified 1567.8583 0.85830857 1571 P47941;A0A338P6Q0;A0A338P675 Crkl Crk-like protein yes no 0 0 0 1 11.5 0.5 1 1 46.628 46.628 4 0.024433 10147 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 40.113 25.423 168.2 82.479 155.1 201.42 73.495 0 158 83 157 194 74 0 2 1 2 2 1 0 9171.3 21756 1571 20936 50450;50451 58495;58496 58495 2 VSHYIINSSGPRPPVPPSPAQPPPGVSPSR Unmodified 3073.6098 0.60975203 2166 Q64010;Q5ND50;F7D232 Crk Adapter molecule crk no no 0 0 0 1 10 0 1 55.12 55.12 4 5.0599E-08 13851 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.197 43.349 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 4297.6 21757 2166 20937 50452 58497 58497 1 VSIAVIK Unmodified 728.47963 0.47962569 1500 P31938 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 yes yes 0 0 0 0 8.8 4.12 1 1 1 1 1 61.127 61.127 2 0.010118 16020 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.79 60.076 1261 1351.2 1153.5 1042 1152.1 1442.5 1188 1368 1176 1034 1172 1384 5 5 4 3 2 5 170960 21758 1500 20938 50453;50454;50455;50456;50457 58498;58499;58500;58501;58502 58501 5 VSIDGVEWSDIK Unmodified 1346.6718 0.67179615 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 8.33 3.3 2 1 74.799 74.799 2;3 8.1952E-08 27124 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 112.13 57.518 88.098 120.6 131.9 0 123.95 76.183 83 121 129 0 121 74 2 3 3 0 3 2 8123.6 21759 2594 20939 50458;50459;50460 58503;58504;58505 58503 3 VSIFFDYAK Unmodified 1088.5542 0.5542472 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6;A0A0A6YVU0;A0A0A6YW86 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 11 0.816 1 1 1 80.17 80.17 2;3 0.00056196 24732 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.111 63.763 365.52 347.91 309.11 419.4 551.44 608.21 344 355 321 406 573 579 2 2 1 2 2 2 68828 21760 65 20940 50461;50462;50463 58506;58507;58508 58507 3 VSILESLDKWER Unmodified 1473.7827 0.78274359 3119 Q9DBC7 Prkar1a cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed yes yes 0 0 0 1 10 2.16 1 1 1 76.851 76.851 3 7.7753E-05 26596 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 92.295 53.496 78.369 158.55 256.07 101.49 273.1 74.673 74 158 250 102 268 74 1 2 2 1 2 1 15501 21761 3119 20941 50464;50465;50466 58509;58510;58511 58509 3 VSILESLEK Unmodified 1016.5754 0.57537657 745 D3Z0V6;P12849 Prkar1b cAMP-dependent protein kinase type I-beta regulatory subunit yes no 0 0 0 0 8 0 1 74.749 74.749 2 0.0038252 25546 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.662 30.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21762 745 20942 50467 58512 58512 1 VSILFGHENR Unmodified 1170.6146 0.61455605 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 9 0 1 54.529 54.529 3 0.0011023 15221 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.962 56.005 0 86.969 80.355 95.029 97.333 145.4 0 83 83 93 102 139 0 1 1 1 1 1 14375 21763 1752 20943 50468 58513 58513 1 VSILIGASQDLIPQLK Unmodified 1693.9978 0.99782174 1272 O88587;D3Z227 Comt Catechol O-methyltransferase yes no 0 0 0 0 11.5 0.5 1 1 93.416 93.416 3 7.8738E-06 30255 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.706 66.448 0 69.9 19.365 29.927 92.521 88.277 0 66 19 28 92 84 0 3 1 1 3 3 7120.9 21764 1272 20944 50469;50470 58514;58515;58516;58517 58515 4 VSILPGTPLSR Unmodified 1138.671 0.67100829 360 Q08460;J3QMT8;A0A286YD35;E3VRY9;J3QN27;E9Q9P4;F7BHL0;A0A087WQN5;A0A087WRS4;A0A286YDM6;A0A286YCP1;A0A087WQ41;A0A286YCZ9;A0A286YDC1;A0A286YD59;A0A286YE30;A0A286YDR7;A0A286YCQ2;A0A286YDU9;F6WSZ3;A0A286YCI9;E3VRY6;E3VRZ4;A0A286YCW3;F6ZSN2;F6XW53;F6V0P5;A0A286YCF5;J3QP84 Kcnma1 Calcium-activated potassium channel subunit alpha-1 yes no 0 0 0 0 10 0 1 66.331 66.331 2 6.2984E-08 18772 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.03 58.234 88.355 41.598 83.044 85.77 0 78.884 83 46 83 83 0 74 1 1 1 1 0 1 10118 21765 360 20945 50471 58518 58518 1 VSISTLNK Unmodified 860.49673 0.49673232 415 D3Z4T6;A0A4W9;Q80Z24;H3BKU7 Negr1 Neuronal growth regulator 1 yes no 0 0 0 0 9.5 0.5 1 1 54.898 54.898 2 0.0097414 15426 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 99.442 39.005 0 115.93 207.28 145.82 190.91 154.71 0 111 204 148 194 148 0 1 2 2 2 1 19575 21766 415 20946 50472;50473 58519;58520 58519 2 VSISTLNKR Deamidation (N) 1017.5819 0.58185894 415 D3Z4T6;A0A4W9;Q80Z24;H3BKU7 Negr1 Neuronal growth regulator 1 yes no 0 1 0 1 9 0 1 48.712 48.712 3 0.015405 12492 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.765 31.107 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21767 415 20947 50474 58521 58521 112 1 VSISTLNKR Unmodified 1016.5978 0.59784335 415 D3Z4T6;A0A4W9;Q80Z24;H3BKU7 Negr1 Neuronal growth regulator 1 yes no 0 0 0 1 10.5 0.5 1 1 46.27 46.27 3 0.001279 10277 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.692 51.974 344.38 176.66 261.2 0 184.64 197.27 335 181 252 0 183 190 2 1 1 0 1 1 30587 21768 415 20947 50475;50476 58522;58523 58522 2 VSLAVLNPYIK Unmodified 1215.7227 0.72270951 3110 Q9DB20;A0A338P776;F7D3P8 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 9.12 4.73 2 2 3 1 79.6 79.6 2;3 2.45E-13 24107 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 151.22 84.917 1085.6 709.13 327.76 1397.1 159.57 916.55 1015 699 319 1286 160 862 6 6 5 7 3 6 933730 21769 3110 20948 50477;50478;50479;50480;50481;50482;50483;50484 58524;58525;58526;58527;58528;58529;58530;58531;58532;58533;58534;58535;58536 58530 13 VSLAVSAFK Unmodified 920.53312 0.53311783 2303 Q80TL4;S4R193;S4R202 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 7.67 4.78 1 1 1 68.554 68.554 2;3 0.0015062 17101 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 85.862 55.125 20.387 0 38.334 77.542 56.126 18.652 19 0 37 74 56 19 1 0 1 2 1 1 3569.3 21770 2303 20949 50485;50486;50487 58537;58538;58539 58539 3 VSLDEDNDR Unmodified 1061.4625 0.46253166 2029 Q4V9Z5;A0A0U1RNQ8 Sez6l2 Seizure 6-like protein 2 yes no 0 0 0 0 2.5 0.5 1 1 41.115 41.115 2 0.0025735 12499 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 94.409 52.334 129.43 25.749 46.008 117.08 79.971 216.25 121 28 46 111 83 205 2 1 1 2 1 2 13089 21771 2029 20950 50488;50489 58540;58541 58541 2 VSLEDLYNGK Deamidation (N) 1137.5554 0.55536941 3279 Q9QYJ0 Dnaja2 DnaJ homolog subfamily A member 2 yes yes 0 1 0 0 6 0 1 71.281 71.281 3 0.0070392 25260 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.297 27.772 20.093 58.229 0 0 0 0 19 56 0 0 0 0 1 1 0 0 0 0 1901.7 21772 3279 20951 50490 58542 58542 1124 1 VSLELGGK Unmodified 801.45962 0.45961853 2633 Q8R0Y6;D3Z6B9;Q8K009 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 10.5 2.5 1 1 58.856 58.856 2 0.008017 20301 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.992 28.739 0 98.952 0 0 122.93 75.376 0 93 0 0 120 74 0 1 0 0 1 1 5118 21773 2633 20952 50491;50492 58543;58544 58544 2 VSLHYGIMCLK Unmodified 1319.673 0.6729989 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 11 0 1 64.631 64.631 3 0.027854 17583 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 45.653 19.055 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21774 1669 20953 50493 58545 58545 1 VSLPNYPAIPSDATLEIQNLR Unmodified 2310.222 0.22196103 2122 Q61282 Acan Aggrecan core protein yes yes 0 0 0 0 9.33 2.62 1 1 1 83.35 83.35 3 8.5615E-08 30306 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.088 59.397 20.149 0 39.932 0 66.702 19 19 0 37 0 65 19 1 0 1 0 2 1 16794 21775 2122 20954 50494;50495;50496 58546;58547;58548 58546 3 VSLPTANPDVSSGITQIK Unmodified 1825.9785 0.97854286 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 8 0 1 69.944 69.944 3 0.00064635 23321 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.487 38.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21776 2499 20955 50497 58549 58549 1 VSLQDPSALATSK Unmodified 1315.6983 0.69834526 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 9.33 2.62 1 1 1 61.44 61.44 2 3.6739E-18 20012 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.98 69.511 88.372 84.713 43.667 56.697 148.94 173.77 83 84 46 56 148 167 3 2 1 1 2 3 11384 21777 1424 20956 50498;50499;50500 58550;58551;58552 58550 3 VSLVLSALQAGNK Unmodified 1298.7558 0.75580056 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1 Tln2 Talin-2 yes no 0 0 0 0 1 0 1 82.465 82.465 3 7.9353E-05 28934 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.69 59.389 20.101 0 47.997 37.58 0 20.254 19 0 46 37 0 19 1 0 1 1 0 1 4993.1 21778 287 20957 50501 58553 58553 1 VSLVTAPVK Unmodified 912.56442 0.56441796 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 59.431 59.431 2;3 0.00035114 15312 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 127.68 94.558 147.81 249.82 224.04 175.96 337.39 331.15 139 246 222 176 334 315 1 2 2 2 2 2 52819 21779 2583 20958 50502;50503;50504;50505 58554;58555;58556;58557 58556 4 VSMELGGLAPFIVFDSANVDQAVAGAMASK Unmodified 2994.4831 0.48307945 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 10 2.16 1 1 1 108.12 108.12 4 9.1516E-32 37304 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.003 74.959 7.4975 22.902 0 5.3319 13.139 15.817 7 22 0 5 13 15 1 3 0 1 2 2 4752.1 21780 2469 20959 50506;50507;50508 58558;58559;58560 58559 3 VSMIVNYLLK Deamidation (N) 1179.6573 0.65733206 3417 yes yes 0 1 0 0 6 0 1 44.49 44.49 3 0.051836 12677 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.64 12.68 78.822 53.396 52.254 106.34 107.92 96.058 74 56 56 102 111 93 1 1 1 1 1 1 14888 + 21781 3417 20960 50509 58561 58561 1149 1 VSNAEPEPR Deamidation (N) 998.46689 0.46688876 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 1 0 0 1 0 1 34.946 34.946 2 0.0081124 9059 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 122.96 68.351 48.834 35.102 97.485 17.715 123.11 46.604 46 37 93 19 120 46 1 1 2 1 2 1 13833 21782 575 20961 50510 58562;58563 58563 168 2 VSNAEPEPR Unmodified 997.48287 0.48287317 575 B1AQY9;B1AQZ0;Q8CHH9;B7ZC46 Sept8 Septin-8 yes no 0 0 0 0 5.5 4.39 1 1 1 1 31.997 31.997 2 3.9367E-05 8310 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 134.23 69.19 118.39 107.78 139.86 93.802 130.99 146.34 111 107 138 93 130 139 3 4 4 3 3 3 82379 21783 575 20961 50511;50512;50513;50514 58564;58565;58566;58567;58568 58565 5 VSNEEVTEELLHVNDDLNNVFLR Unmodified 2697.3246 0.3245882 2058 Q5SRX1;Q5SXA5;Q5SXA4 Tom1l2 TOM1-like protein 2 yes no 0 0 0 0 4 0 1 88.289 88.289 3 1.3519E-22 33404 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 122.18 111.2 0 6.2864 5.8382 6.21 0 0 0 6 6 6 0 0 0 1 1 1 0 0 4309 21784 2058 20962 50515 58569 58569 1 VSNLEER Unmodified 845.4243 0.42429566 1287 Q8R357;O88998;A3KGE4;G3X9Q7 Olfm1 Noelin yes no 0 0 0 0 4 0 1 37.275 37.275 2 0.032395 10243 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.368 25.553 108.1 129.08 116.54 112.58 95.5 175.3 102 130 120 111 102 167 1 1 1 1 1 1 17676 21785 1287 20963 50516 58570 58570 1 VSNTLESR Unmodified 904.46141 0.46140945 1597 P50518;Q9D593 Atp6v1e1;Atp6v1e2 V-type proton ATPase subunit E 1;V-type proton ATPase subunit E 2 yes no 0 0 0 0 7 3.16 1 1 1 1 1 36.358 36.358 2 0.0001668 9461 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 158.37 69.243 305.1 554.57 785.02 713.6 557.36 944.56 288 547 780 704 568 901 2 4 4 4 4 5 244440 21786 1597 20964 50517;50518;50519;50520;50521 58571;58572;58573;58574;58575 58575 5 VSPDGTAFCSGSWDHTLR Unmodified 1991.8796 0.87957387 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 5.5 0.5 1 1 59.525 59.525 3 2.6098E-07 19813 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.894 72.624 78.558 72.088 80.83 95.515 70.019 87.279 74 74 83 93 74 83 2 2 2 2 2 1 8026.3 21787 1752 20965 50522;50523 58576;58577 58577 2 VSPEEAIK Unmodified 871.4651 0.46509784 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 5 0 1 49.856 49.856 2 0.015629 15862 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 83.265 33.847 49.079 0 46.922 58.411 0 49.036 46 0 46 56 0 46 1 0 1 1 0 1 4109.5 21788 2269 20966 50524 58578 58578 1 VSPIVSK Unmodified 728.44324 0.44324019 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 9 0 1 50.036 50.036 2 0.048072 13124 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.058 16.27 0 86.968 80.399 94.027 150.49 0 0 83 83 93 148 0 0 1 1 1 1 0 10737 21789 24 20967 50525 58579 58579 1 VSQAAADLK Unmodified 901.4869 0.48689592 2299 Q80SZ7 Gng5 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 yes yes 0 0 0 0 7 0 1 49.32 49.32 2 0.0025617 14170 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 102.52 38.707 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21790 2299 20968 50526 58580 58580 1 VSQAASDLLAYCEAHVR Unmodified 1888.9101 0.91014572 1592 P50153 Gng4 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4 yes yes 0 0 0 0 6.5 0.5 1 1 67.214 67.214 3 7.6573E-05 23323 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.423 40.101 68.815 62.798 103.01 72.684 109.47 96.014 65 65 102 74 111 93 2 2 2 2 2 2 10340 21791 1592 20969 50527;50528 58581;58582 58581 2 VSQGLNGDLYFSNVLPEDTR Deamidation (N) 2224.0648 0.064791686 331 A0A1W2P7Y9;Q810U4;A0A1W2P814 Nrcam Neuronal cell adhesion molecule yes no 0 1 0 0 4 0 1 80.127 80.127 3 2.0813E-05 30062 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.914 49.256 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1759.4 21792 331 20970 50529 58583 58583 92 1 VSQGLNGDLYFSNVLPEDTREDYICYAR Deamidation (N) 3294.5139 0.51392189 331 A0A1W2P7Y9;Q810U4;A0A1W2P814 Nrcam Neuronal cell adhesion molecule yes no 0 1 0 1 4 0 1 80.623 80.623 4 3.2328E-05 30283 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 50.499 39.792 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 1604.2 21793 331 20971 50530 58584 58584 92 1 VSQGVEDGPEAK Unmodified 1214.5779 0.57789577 3316 Q9R1T2 Sae1 SUMO-activating enzyme subunit 1;SUMO-activating enzyme subunit 1, N-terminally processed yes yes 0 0 0 0 3.5 0.5 1 1 43.207 43.207 2;3 0.0011264 13037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.555 43.542 0 0 20.558 0 19.874 0 0 0 19 0 19 0 0 0 1 0 1 0 1407.3 21794 3316 20972 50531;50532 58585;58586 58586 2 VSQPIEGHAASFAQFK Unmodified 1715.8631 0.86311917 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 6.75 0.829 2 1 1 58.015 58.015 3;4 4.9231E-33 18298 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 146.86 120.32 306.43 247.65 406.77 457.04 278.22 547.17 287 241 402 444 288 519 3 2 2 3 3 4 96214 21795 2185 20973 50533;50534;50535;50536 58587;58588;58589;58590;58591 58589 5 VSQTTWDSGFCAVNPK Unmodified 1795.8199 0.81993373 1289 O89053;G3UYK8;A0A0U1RPY8;D3YW57;G3UX53;D3YXM2 Coro1a Coronin-1A;Coronin yes no 0 0 0 0 9.33 2.62 1 1 1 66.441 66.441 3 8.0444E-06 22288 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.738 61.906 265.7 164.5 289.77 214.47 56.579 158.83 250 176 287 213 56 149 3 3 3 3 1 2 50008 21796 1289 20974 50537;50538;50539 58592;58593;58594 58592 3 VSSAGLSLK Unmodified 860.49673 0.49673232 1557 P46660 Ina Alpha-internexin yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 55.432 55.432 2 3.6126E-05 16500 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.77 65.568 1010.1 523.81 812.55 936.06 797.41 620.14 948 551 801 909 812 596 4 3 4 4 4 3 171260 21797 1557 20975 50540;50541;50542;50543;50544 58595;58596;58597;58598;58599 58595 5 VSSASSTAER Unmodified 993.4727 0.47270242 858 E9PYX7;E9Q852;E9Q9C3;Q9QZQ1 Mllt4 Afadin yes no 0 0 0 0 4.5 0.5 1 1 26.538 26.538 2 0.001088 4924 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.732 54.599 0 14.657 14.269 15.302 0 25.584 0 14 14 14 0 24 0 1 1 1 0 2 2400.4 21798 858 20976 50545;50546 58600;58601 58601 2 VSSAVLK Unmodified 702.42759 0.42759012 3145 Q9DCJ5 Ndufa8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 yes yes 0 0 0 0 9 0.816 1 1 1 49.231 49.231 2 0.023689 13587 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.72 45.16 780.76 602.98 815.06 404.13 735.36 890.45 735 629 807 400 750 855 3 3 3 2 3 3 90326 21799 3145 20977 50547;50548;50549 58602;58603;58604 58602 3 VSSGTPIK Unmodified 787.44397 0.44396847 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 8 0 1 42.803 42.803 2 0.035769 10471 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.423 43.687 0 98.065 53.084 36.46 43.445 87.238 0 93 56 37 46 83 0 1 1 1 1 1 4598.5 21800 3274 20978 50550 58605 58605 1 VSSGTPIKIEDPNQFVPLNTNPTEVLEK Unmodified 3065.5921 0.59209586 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 1 6 0 1 79.675 79.675 4 1.467E-21 29308 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 80.359 74.392 29.752 0 49.055 37.017 26.589 29.089 28 0 47 37 28 28 1 0 1 1 1 1 4094.5 21801 3274 20979 50551 58606 58606 1 VSSLPTVYLK Unmodified 1105.6383 0.63831118 1049 F8WIR1;P18242;F6Y6L6;A0A1B0GT66 Ctsd Cathepsin D yes no 0 0 0 0 10.8 1.48 1 1 1 1 69.344 69.344 3 1.2275E-05 25622 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 107.21 67.987 278 126.75 137.88 149.45 206 216.42 260 130 130 139 204 205 3 3 2 2 2 3 126550 21802 1049 20980 50552;50553;50554;50555 58607;58608;58609;58610;58611 58611 5 VSSLTLK Unmodified 746.4538 0.45380487 74;1367;71;949 A0A0A6YY47;E9Q589;A0A0A6YWU2;A0A0A6YY91;E9QB01;P13595 Ncam1 Neural cell adhesion molecule 1 no no 0 0 0 0 10.8 1.48 1 1 1 1 56.128 56.128 2 0.0089677 14290 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.25 17.823 871.81 608.13 905.68 1271.5 1179.9 1085.2 819 613 908 1233 1183 1035 3 2 3 4 3 3 287210 21803 71;74;949;1367 20981 50556;50557;50558;50559 58612;58613;58614;58615 58613 4 VSSQNLVAIPVYVK Unmodified 1515.8661 0.86607929 3228 Q9JKC8;H7BWY2;A0A286YDZ6 Ap3m1 AP-3 complex subunit mu-1 yes no 0 0 0 0 9 0 1 74.084 74.084 3 0.0072914 24608 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.33 28.308 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 5163.1 21804 3228 20982 50560 58616 58616 1 VSSSGLDSLGR Unmodified 1076.5462 0.54620171 1669 P60469;A0A1B0GRM4 Ppfia3 Liprin-alpha-3 yes no 0 0 0 0 6 0 1 50.099 50.099 2 0.0010717 15388 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.029 7.7653 108.36 99.57 98.792 113.41 107.6 96.068 102 102 102 111 111 93 1 1 1 1 1 1 8439.8 21805 1669 20983 50561 58617 58617 1 VSSSPAPAVSWLYHNEEVTTIPDNR Unmodified 2768.3406 0.34057262 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 6 0 1 70.834 70.834 4 0.052465 25211 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 24.287 17.489 0 39.064 18.214 0 57.607 28.204 0 37 19 0 56 28 0 1 1 0 1 1 2301.5 21806 1180 20984 50562 58618 58618 1 VSSTATTQDVIETLAEK Unmodified 1791.9102 0.91018852 858 E9PYX7;E9Q852;E9Q9C3;Q9QZQ1;D3Z7L2;D3YUD2 Mllt4 Afadin yes no 0 0 0 0 6 0 1 77.091 77.091 3 0.009108 28174 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 40.085 22.168 20.387 0 0 0 28.291 29.041 19 0 0 0 28 28 1 0 0 0 1 1 1982.8 21807 858 20985 50563 58619 58619 1 VSSVLALVGK Unmodified 971.60153 0.60153174 2984 Q9CX80 Cygb Cytoglobin yes yes 0 0 0 0 6.5 5.5 1 1 81.167 81.167 2 5.5602E-05 22196 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.87 25.808 0 59.26 19.365 0 65.308 78.086 0 56 19 0 65 75 0 2 1 0 2 2 3508.4 21808 2984 20986 50564;50565 58620;58621 58621 2 VSSVPSNSNVVVGTTNACAPSAR Unmodified 2273.107 0.10700763 648 CON__O43790 yes yes 0 0 0 0 7 0 1 51.62 51.62 3 2.8707E-07 15301 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.464 51.18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2060.6 + 21809 648 20987 50566 58622 58622 1 VSTAVLSITAK Unmodified 1088.6441 0.64412484 1943 Q3TXS7 Psmd1 26S proteasome non-ATPase regulatory subunit 1 yes yes 0 0 0 0 10.5 0.5 1 1 66.763 66.763 2 5.138E-10 19013 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 138.23 88.518 129.55 55.551 0 109.95 81.447 155.44 121 56 0 102 83 148 2 1 0 2 1 2 18313 21810 1943 20988 50567;50568 58623;58624 58623 2 VSTEVDAR Unmodified 875.43486 0.43486035 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 13 0 1 35.044 35.044 2 0.00542 8991 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.41 47.608 217.98 0 152.67 142.83 0 0 204 0 148 139 0 0 1 0 1 1 0 0 21609 21811 246 20989 50569 58625 58625 1 VSTIDGTVITTATYFANLWK Unmodified 2200.1416 0.14158544 3363 Q9Z0S6 Cldn10 Claudin-10 yes yes 0 0 0 0 11 0 1 107.19 107.19 3 1.187E-10 35207 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 87.411 62.092 2.1199 5.1771 0 5.465 0 7.462 2 5 0 5 0 7 1 1 0 1 0 1 1174.1 21812 3363 20990 50570 58626 58626 1 VSTLPATSTR Unmodified 1031.5611 0.56112349 1951 Q3U0M1 Trappc9 Trafficking protein particle complex subunit 9 yes yes 0 0 0 0 7 0 1 41.642 41.642 2 0.0221 10663 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.153 17.926 29.952 18.196 0 20.234 28.359 0 28 19 0 19 28 0 1 1 0 1 1 0 2048.4 21813 1951 20991 50571 58627 58627 1 VSTSPLTR Unmodified 859.47633 0.47633123 758 D3Z2J6;Q9D710 Tmx2 Thioredoxin-related transmembrane protein 2 yes no 0 0 0 0 7 0 1 41.145 41.145 2 0.021985 10414 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.072 49.367 0 57.989 95.433 38.474 92.709 81.569 0 56 93 42 93 79 0 1 1 1 1 1 4717.6 21814 758 20992 50572 58628 58628 1 VSTVFWK Unmodified 865.46979 0.46978929 1438 P23116 Eif3a Eukaryotic translation initiation factor 3 subunit A yes yes 0 0 0 0 11 0 1 68.348 68.348 2 0.034977 19322 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.305 8.3303 0 185 0 0 0 0 0 185 0 0 0 0 0 1 0 0 0 0 11884 21815 1438 20993 50573 58629 58629 1 VSTVTTHSSDSEVPSR Unmodified 1687.8013 0.80130678 1890 Q06890 Clu Clusterin;Clusterin beta chain;Clusterin alpha chain yes yes 0 0 0 0 5 0 1 36.303 36.303 3 0.00072565 9384 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 52.42 38.514 0 0 19.246 29.457 0 29.848 0 0 19 28 0 28 0 0 1 1 0 1 2651.5 21816 1890 20994 50574 58630 58630 1 VSVCAETFNPDEEEEDNDPR Unmodified 2350.9496 0.94956351 68 A0A0A6YX73;Q8K1M3;P12367 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit yes no 0 0 0 0 2 0.816 1 1 1 58.832 58.832 3 1.9904E-16 20216 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 91.589 87.321 20.265 0 20.456 0 19.564 9.0357 19 0 19 0 19 9 1 0 1 0 1 1 4628.9 21817 68 20995 50575;50576;50577 58631;58632;58633 58632 3 VSVFQTQLPSLGAGLLQSR Unmodified 2000.1055 0.10547471 2350 Q80ZX0;F6VJC5 Sec24b yes no 0 0 0 0 1 0 1 86.806 86.806 3 0.043328 30925 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 30.416 20.219 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 961.47 21818 2350 20996 50578 58634 58634 1 VSVISVEEPPQR Unmodified 1338.7143 0.71432967 3155 Q9DCW4;A0A0U1RQB4 Etfb Electron transfer flavoprotein subunit beta yes no 0 0 0 0 5.67 0.471 1 2 55.654 55.654 2;3 2.5913E-05 17983 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.754 76.517 88.822 0 39.835 20.234 133.06 58.081 83 0 37 19 130 56 2 0 1 1 3 1 12297 21819 3155 20997 50579;50580;50581 58635;58636;58637 58636 3 VSVLTGIIK Unmodified 928.59572 0.59571809 2011 Q3UVL4 Vps51 Vacuolar protein sorting-associated protein 51 homolog yes yes 0 0 0 0 11 0 1 73.516 73.516 2 0.0081895 21633 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.677 36.69 78.889 0 86.15 73.131 139.13 84.508 74 0 83 74 139 83 1 0 1 1 1 1 7090 21820 2011 20998 50582 58638 58638 1 VSVNDFIIR Unmodified 1061.5869 0.58694431 2423 Q8BKZ9 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 0 8 0 1 69.671 69.671 2 0.015163 23123 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.375 24.656 108.73 0 119.55 0 45.122 87.19 102 0 111 0 46 83 1 0 1 0 1 1 16704 21821 2423 20999 50583 58639 58639 1 VSVSFIR Unmodified 806.46504 0.46503826 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 10 0 1 57.852 57.852 2 0.019609 15078 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.67 30.178 0 105.61 174.36 0 0 189.75 0 102 167 0 0 178 0 1 1 0 0 1 15332 21822 728 21000 50584 58640 58640 1 VSVSPVVHVR Unmodified 1077.6295 0.62947783 2794 Q921F4;V9GXB6 Hnrnpll Heterogeneous nuclear ribonucleoprotein L-like yes no 0 0 0 0 8 0 1 44.147 44.147 3 7.3745E-06 11154 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.45 49.928 59.612 55.006 33.418 67.686 72.682 46.962 56 56 37 65 74 46 1 1 1 1 1 1 5160.3 21823 2794 21001 50585 58641 58641 1 VSVVEPGNFIAATSLYSPER Unmodified 2135.0899 0.089884225 2336 Q80XN0 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 81.29 81.29 3 1.0813E-10 28701 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.539 74.479 29.882 28.494 68.368 28.875 48.116 98.072 28 28 66 28 46 92 2 2 3 1 1 2 35046 21824 2336 21002 50586;50587 58642;58643;58644;58645 58645 4 VSYALLFGDYLTQNIQAAK Unmodified 2114.1048 0.10480601 1139 J3QJX3;Q9Z2G6 Sel1l Protein sel-1 homolog 1 yes no 0 0 0 0 11.5 0.5 1 1 97.787 97.787 3 0.0070657 32053 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 39.385 23.62 28 6.2275 9.3644 0 2.9212 6.3126 28 6 9 0 3 6 1 1 1 0 1 1 2805.8 21825 1139 21003 50588;50589 58646;58647 58646 2 VSYFEIYLDK Unmodified 1275.6387 0.63870511 1481;2139;1507 P28738;Q61768;E9QAK5;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin-like protein;Kinesin heavy chain isoform 5A no no 0 0 0 0 8 0 1 82.67 82.67 3 0.0013174 29272 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.006 48.155 0 0 0 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 3654.8 21826 1481;2139;1507 21004 50590 58648 58648 1 VSYGIGEEEHDQEGR Unmodified 1703.7387 0.73870652 1473 P28352;D3Z124;D3Z6R9 Apex1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial yes no 0 0 0 0 2.5 0.5 1 1 41.54 41.54 3 1.3779E-05 12653 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.32 89.237 0 19.566 78.894 0 19.874 39.442 0 19 74 0 19 37 0 1 2 0 1 1 7372.8 21827 1473 21005 50591;50592 58649;58650 58650 2 VSYPLCFIFSSPVGCKPEQQMMYAGSK Unmodified 3110.4374 0.43739159 2930 Q9CQI3;A0A2I3BR94;A0A2I3BPS1;D3Z2F6;D3YY16;Q9ERL7 Gmfb;Gmfg Glia maturation factor beta;Glia maturation factor gamma yes no 0 0 0 1 11.5 0.5 1 1 87.121 87.121 4 5.8925E-05 27673 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.862 38.172 30.044 19.729 29.112 0 0 29.848 28 19 28 0 0 28 1 1 1 0 0 1 8715.9 21828 2930 21006 50593;50594 58651;58652 58651 2 VSYPLLIR Unmodified 959.5804 0.58040237 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 9.5 0.5 1 1 66.412 66.412 2 0.012521 20939 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.046 52.071 69.42 64.479 0 80.882 0 108.73 65 65 0 74 0 102 1 1 0 1 0 1 40061 21829 1226 21007 50595;50596 58653;58654 58653 2 VSYRPTQVGR Unmodified 1161.6255 0.62545508 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 1 9.6 2.15 1 1 1 1 1 35.068 35.068 3 0.0021908 6989 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.099 48.348 786.27 316.29 1052.9 1010 901.44 969.92 739 319 1034 997 938 934 4 3 4 4 4 4 140690 21830 2479 21008 50597;50598;50599;50600;50601 58655;58656;58657;58658;58659 58656 5 VSYSHIQSK Unmodified 1047.5349 0.53490874 860;1464 P27546;A0A140T8T5;A0A0G2JDY5;E9PZ43;A0A0G2JFK3 Map4 Microtubule-associated protein 4;Microtubule-associated protein no no 0 0 0 0 8.5 0.5 1 1 38.315 38.315 3 0.0023907 8162 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 72.643 46.524 166.37 222.26 163.49 67.93 141.47 202.77 157 222 167 65 139 194 2 2 2 1 1 2 8891.1 21831 1464;860 21009 50602;50603 58660;58661 58661 2 VTADVINAAEK Unmodified 1129.5979 0.59790293 2138 Q61753;F6ZSB7 Phgdh D-3-phosphoglycerate dehydrogenase yes no 0 0 0 0 5.5 0.5 1 1 59.137 59.137 2;3 5.6093E-08 19626 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.96 67.632 118.46 36.052 76.811 104.67 118.84 85.087 111 37 74 102 121 83 2 1 1 2 2 2 16860 21832 2138 21010 50604;50605 58662;58663 58663 2 VTASLLGSPSK Unmodified 1058.5972 0.59717465 2297 Q7TT50 Cdc42bpb Serine/threonine-protein kinase MRCK beta yes yes 0 0 0 0 10 0 1 59.446 59.446 2 0.012648 15846 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.418 25.031 49.358 0 0 0 45.781 67.984 46 0 0 0 46 65 1 0 0 0 1 1 2414.9 21833 2297 21011 50606 58664 58664 1 VTATPLMTAK Unmodified 1031.5685 0.56851706 1125 H7BWY8;Z4YL87;Q8C8T8 Tsr2 Pre-rRNA-processing protein TSR2 homolog yes no 0 0 0 0 9 0 1 57.699 57.699 2 5.7493E-05 16804 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 109.88 68.429 29.326 66.103 64.586 36.592 0 0 28 65 65 37 0 0 1 1 1 1 0 0 6267.5 21834 1125 21012 50607 58665 58665 1 VTAVIPCFPYAR Unmodified 1392.7224 0.72239194 1064;2505;2967 G3UXL2;Q9D7G0;Q8C5R8;Q9CS42 Prps1l3;Prps1;Prps1l1;Prps2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 no no 0 0 0 0 11 0.816 1 1 1 74.177 74.177 2 3.92E-13 21833 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 131.62 101.45 129.55 21.983 28.827 30.091 190 61.851 121 23 28 28 185 60 3 1 1 1 3 2 60199 21835 1064;2505;2967 21013 50608;50609;50610 58666;58667;58668 58667 3 VTAVNDIAEQLLK Deamidation (N) 1413.7715 0.7715102 2186 Q68FG2 Sptbn2 yes yes 0 1 0 0 6 0 1 78.418 78.418 3 0.00011309 28702 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.531 62.247 20.195 38.006 0 40.441 0 39.442 19 37 0 37 0 37 1 1 0 1 0 1 2306.5 21836 2186 21014 50611 58669 58669 881 1 VTAVNDIAEQLLK Unmodified 1412.7875 0.78749461 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 7 0 1 83.989 83.989 2 0.00033877 30496 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.547 29.241 48.906 40.696 41.53 27.519 32.444 23.592 46 42 42 28 33 23 1 1 1 1 1 1 3658.2 21837 2186 21014 50612 58670 58670 1 VTCLLYPHQVSAR Unmodified 1542.7977 0.79768214 2790 Q920I9 Wdr7 WD repeat-containing protein 7 yes yes 0 0 0 0 10 0 1 54.727 54.727 3 0.050938 13630 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 34.432 17.106 187.67 0 197.73 155.04 196.08 174.56 176 0 190 156 200 169 1 0 1 1 1 1 13065 21838 2790 21015 50613 58671 58671 1 VTCVVVDVSEDDPDVR Unmodified 1802.8356 0.83564337 2 A0A075B5P3;A0A0A6YVP0 Ighg2b yes no 0 0 0 0 4 0 1 65.963 65.963 3 0.0004871 23586 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.09 44.954 0 20.216 0 30.604 0 0 0 19 0 28 0 0 0 1 0 1 0 0 2781.1 21839 2 21016 50614 58672 58672 1 VTDALNATR Unmodified 959.50361 0.50360861 1766 P63038 Hspd1 60 kDa heat shock protein, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 46.585 46.585 2 0.0012416 12905 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 104.39 51.912 639.68 434.88 683.76 387.65 409.84 582.07 602 460 675 399 417 557 2 2 2 2 1 2 82651 21840 1766 21017 50615;50616 58673;58674 58674 2 VTDDGVELVAENLR Unmodified 1528.7733 0.77330111 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 3.5 0.5 1 1 72.073 72.073 3 6.6027E-05 26236 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.631 64.633 0 9.2597 27.92 0 0 0 0 9 27 0 0 0 0 1 2 0 0 0 10523 21841 547 21018 50617;50618 58675;58676 58676 2 VTDFEHR Unmodified 902.42463 0.42463001 2507 Q8C605;Q9WUA3;F6YL81 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 7.33 4.03 1 1 1 37.312 37.312 3 0.0043148 10355 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 104.75 56.831 148.49 174.42 105.75 209.04 58.576 178.02 139 175 111 195 56 167 2 3 2 2 1 2 29316 21842 2507 21019 50619;50620;50621 58677;58678;58679 58677 3 VTDFGDKVEDPTFLNQLQSGVNR Unmodified 2578.2663 0.26634504 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 1 6 0.816 1 1 1 76.572 76.572 3;4 5.7545E-12 28474 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.646 61.337 40.536 47.275 0 39.386 56.098 19.477 38 47 0 37 56 19 2 2 0 2 2 1 9449.6 21843 3204 21020 50622;50623;50624 58680;58681;58682 58680 3 VTDLLGGLFSK Unmodified 1148.6441 0.64412484 1211 O35857 Timm44 Mitochondrial import inner membrane translocase subunit TIM44 yes yes 0 0 0 0 11 0 1 91.784 91.784 2 0.0024988 29406 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.659 45.862 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 6425.9 21844 1211 21021 50625 58683 58683 1 VTDLQGDLTK Unmodified 1088.5714 0.57135383 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 5.5 0.5 1 1 59.968 59.968 2;3 0.0013713 20036 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 69.721 20.926 0 29.792 0 20.767 0 49.036 0 28 0 19 0 46 0 1 0 1 0 1 1302.3 21845 2537 21022 50626;50627 58684;58685 58685 2 VTDTDFDGVEVR Unmodified 1351.6256 0.62557424 2427 Q8BLF1;Q8BYQ0 Nceh1 Neutral cholesterol ester hydrolase 1 yes no 0 0 0 0 2.67 0.471 1 2 59.009 59.009 2;3 5.2755E-13 20304 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 130.63 96.423 89.369 61.866 75.853 66.049 44.121 127.73 84 65 75 65 47 121 3 3 2 2 2 3 11041 21846 2427 21023 50628;50629;50630 58686;58687;58688 58686 3 VTEAVECLLSLK Unmodified 1360.7272 0.72720254 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 9.5 0.5 1 1 92.398 92.398 3 0.00020334 32794 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.76 44.322 20.387 0 0 19.707 56.371 37.833 19 0 0 19 56 37 1 0 0 1 1 1 2830.7 21847 2536 21024 50631;50632 58689;58690 58689 2 VTEAVVATMPEGLTPDLVQEACESELNEATGTK Unmodified 3488.6538 0.65384577 2886 Q99P72 Rtn4 Reticulon-4 yes yes 0 0 0 0 5 0 1 89.373 89.373 4 1.782E-06 34152 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.557 40.837 0 0 0 5.2925 9.1709 0 0 0 0 5 9 0 0 0 0 1 1 0 927.55 21848 2886 21025 50633 58691 58691 1 VTEESVPSGENQSVAGGDEEAVDEYQELNAR Unmodified 3307.46 0.46003164 2213 Q6P1Y9 Exoc1 yes yes 0 0 0 0 1 0 2 64.127 64.127 3;4 5.764E-06 21482 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 47.159 35.509 0 0 0 0 19.197 19.706 0 0 0 0 19 19 0 0 0 0 1 1 11710 21849 2213 21026 50634;50635 58692;58693 58692 2 VTEGGEPYR Unmodified 1006.472 0.47197413 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 8.5 4.5 1 1 37.035 37.035 2 0.0049391 10134 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.161 37.503 79.402 0 0 69.693 71.893 67.238 74 0 0 65 74 65 1 0 0 1 1 1 5962.4 21850 2408 21027 50636;50637 58694;58695 58694 2 VTEGLTDVILYHQPDDK Unmodified 1941.9684 0.96837211 218 G3UZI2;A0A0R4J259;G3V018;Q7TMK9;G3UZ48 Syncrip Heterogeneous nuclear ribonucleoprotein Q yes no 0 0 0 0 5 0 1 71.113 71.113 3 2.1125E-06 25919 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.651 63.513 39.397 16.946 36.698 47.594 26.432 19.5 37 19 37 46 28 19 1 1 1 1 1 1 3365.2 21851 218 21028 50638 58696 58696 1 VTEGQQER Unmodified 945.45157 0.45157304 2151 Q62318 Trim28 Transcription intermediary factor 1-beta yes yes 0 0 0 0 2.5 0.5 1 1 24.999 24.999 2 0.010052 4963 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 98.629 52.677 54.468 70.179 37.595 88.106 77.916 96.915 51 70 37 84 79 93 1 2 1 2 1 2 19276 21852 2151 21029 50639;50640 58697;58698 58697 2 VTEGTIREEQEECDEELEEEPGQGAK Unmodified 2990.2935 0.29348359 1250 Q80UE5;O70318;Q80UE4 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 1 1 0 1 55.058 55.058 4 5.635E-23 17176 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 95.138 77.344 79.128 54.248 0 80.046 44.439 0 74 56 0 74 46 0 1 1 0 1 1 0 10727 21853 1250 21030 50641 58699 58699 1 VTELECVSSQANAVHSHK Unmodified 1994.948 0.94798779 3402 Q9Z2Y3;D3Z6A7;E9Q0I8;E9Q0I7 Homer1 Homer protein homolog 1 yes no 0 0 0 0 5 0 1 49.687 49.687 4 5.4708E-05 15831 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.167 35.577 69.451 0 49.422 0 67.99 0 65 0 46 0 65 0 1 0 1 0 1 0 3759.2 21854 3402 21031 50642 58700 58700 1 VTELEQEK Unmodified 974.49204 0.49204087 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 4 0 2 50.362 50.362 2;3 0.0038978 16499 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.324 17.428 0 95.513 142.06 58.569 0 88.478 0 92 139 56 0 83 0 2 2 1 0 1 12260 21855 728 21032 50643;50644 58701;58702 58702 2 VTEMLVNVLNICSDDELGSEEDGFDGATAAAR Unmodified 3397.529 0.52897961 1786 P63328 Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform yes yes 0 0 0 0 7.43 2.44 1 2 2 1 1 99.433 99.433 3;4 2.1067E-29 37062 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.531 78.903 16.73 19.729 49.591 7.2364 30.253 17.33 16 19 47 7 29 17 2 1 3 2 3 2 29720 21856 1786 21033 50645;50646;50647;50648;50649;50650;50651 58703;58704;58705;58706;58707;58708;58709 58704 7 VTEQEWR Unmodified 946.45084 0.45084476 2197 Q6IRU5;F7BHJ0 Cltb Clathrin light chain B yes no 0 0 0 0 7.33 4.03 1 1 1 43.021 43.021 2 0.020272 12708 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.064 27.854 295.78 322.28 150.1 163.75 0 0 278 324 158 158 0 0 2 2 1 1 0 0 80432 21857 2197 21034 50652;50653;50654 58710;58711;58712 58711 3 VTEQLIEAINNGDFEAYTK Deamidation (N) 2155.0321 0.032094575 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;F6RWZ9;E9PXV3 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 1 0 0 6.5 3.77 2 1 1 85.334 85.334 3;4 1.6955E-07 33356 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.586 62.766 29.893 19.566 84.85 8.6408 52.688 19.168 28 19 80 9 51 19 2 1 4 1 2 1 8647 21858 103 21035 50655;50656;50657;50658 58713;58714;58715;58716 58716 32;33 4 VTEQLIEAINNGDFEAYTK Unmodified 2154.0481 0.04807899 103 E9Q1T1;A0A0G2JGS4;E9Q1W0;Q6PHZ2;E9Q1V9;F6RWZ9;E9PXV3 Camk2d Calcium/calmodulin-dependent protein kinase type II subunit delta yes no 0 0 0 0 7 0 1 89.526 89.526 4 0.044102 33083 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 29.636 12.558 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1647.6 21859 103 21035 50659 58717 58717 1 VTEQLIEAISNGDFESYTK Deamidation (N) 2144.0161 0.016110159 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 1 0 0 6.75 2.83 3 5 5 3 1 3 89.698 89.698 3;4 4.8266E-19 32985 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 127.17 111.92 411.31 310.27 390.88 332.41 486.49 391.48 392 307 385 324 486 374 16 14 13 12 15 16 321060 21860 1355 21036 50660;50661;50662;50663;50664;50665;50666;50667;50668;50669;50670;50671;50672;50673;50674;50675;50676;50677;50678;50679 58718;58719;58720;58721;58722;58723;58724;58725;58726;58727;58728;58729;58730;58731;58732;58733;58734;58735;58736;58737;58738;58739;58740;58741;58742;58743;58744;58745 58730 427 28 VTEQLIEAISNGDFESYTK Unmodified 2143.0321 0.032094574 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 7.8 2.86 2 3 1 1 1 2 92.206 92.206 3;4 5.0313E-14 36742 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 119.38 103.79 293.42 286.92 185.4 353.46 414.43 626.19 275 287 179 335 426 599 7 8 5 7 8 11 136030 21861 1355 21036 50680;50681;50682;50683;50684;50685;50686;50687;50688;50689 58746;58747;58748;58749;58750;58751;58752;58753;58754;58755;58756;58757;58758;58759;58760;58761 58761 16 VTFAPTYK Unmodified 925.49092 0.49091866 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 9.5 0.5 1 1 58.103 58.103 2 0.0089146 15118 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.6 50.635 280.92 115.4 297.77 342.17 215.3 339.24 264 120 297 333 232 324 2 1 2 2 2 2 74069 21862 927 21037 50690;50691 58762;58763 58763 2 VTFCHLPFQSK Unmodified 1362.6754 0.67544174 738 D3Z2Q2;D3Z079;Q8K400 Stxbp5 Syntaxin-binding protein 5 yes no 0 0 0 0 10 0 1 61.924 61.924 3 0.0048782 16812 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 54.7 24.262 0 0 66.964 75.55 71.294 76.85 0 0 65 74 74 74 0 0 1 1 1 1 8784.3 21863 738 21038 50692 58764 58764 1 VTFQFSYGTK Unmodified 1176.5815 0.58152458 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 10.5 0.5 1 1 67.749 67.749 2;3 0.024587 19386 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 44.612 28.747 49.358 0 0 60.189 54.18 47.49 46 0 0 56 56 46 1 0 0 1 1 1 7299.6 21864 2379 21039 50693;50694 58765;58766 58765 2 VTFSCAAGLGQR Unmodified 1265.6187 0.61865515 895 E9Q3M3;O08788;E9Q586;D3YX34 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 9.5 0.5 1 1 55.469 55.469 2 5.4295E-08 15739 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.46 79.736 49.179 0 30.097 19.317 67.103 0 46 0 28 18 65 0 2 0 1 1 2 0 9670.1 21865 895 21040 50695;50696 58767;58768 58767 2 VTFSEDDEIINPEDVDPSVGR Unmodified 2332.0707 0.070664925 447 A2ADR8;Q8R3G1 Ppp1r8 Nuclear inhibitor of protein phosphatase 1 yes no 0 0 0 0 2.5 0.5 1 1 76.302 76.302 3 3.5348E-09 27405 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.391 68.228 9.477 9 30.248 0 29.288 0 9 9 28 0 28 0 1 1 1 0 1 0 3679.1 21866 447 21041 50697;50698 58769;58770 58769 2 VTFSLQPK Unmodified 918.51747 0.51746776 2841;2378 Q99KC8;Q8BGF0 Vwa5a;AW551984 von Willebrand factor A domain-containing protein 5A no no 0 0 0 0 10 0 1 62.532 62.532 2 0.008761 17134 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 102 68.451 88.072 71.031 105.66 0 0 138.58 83 74 102 0 0 130 1 1 1 0 0 1 8028.1 21867 2841;2378 21042 50699 58771 58771 1 VTFVNFTVTR Unmodified 1182.6397 0.63970816 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 11.3 0.471 2 1 69.862 69.862 2;3 5.3025E-07 20055 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 135.55 83.067 168.8 241.18 25.955 19.22 0 0 158 240 28 19 0 0 1 3 1 1 0 0 54816 21868 3204 21043 50700;50701;50702 58772;58773;58774 58773 3 VTGADVPMPYAK Unmodified 1247.622 0.62200919 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 62.205 62.205 3 0.001269 20343 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.57 28.698 79.402 0 77.108 126.14 80.42 175.73 74 0 74 121 83 167 1 0 1 2 1 2 21061 21869 3016 21044 50703;50704 58775;58776 58775 2 VTGGIFSVTK Unmodified 1007.5651 0.56514624 3102 Q9DAM7 Tmem263 Transmembrane protein 263 yes yes 0 0 0 0 10 0 1 65.854 65.854 2 0.0035651 18554 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.017 37.832 48.732 44.531 67.413 0 0 49.036 46 46 65 0 0 46 1 1 1 0 0 1 5045.8 21870 3102 21045 50705 58777 58777 1 VTGGQTIQVETSSESPFPAK Unmodified 2062.0219 0.021864239 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 5.5 0.5 1 1 64.084 64.084 3;4 1.1803E-10 22572 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 87.356 64.53 87.825 75.214 174.69 23.51 93.214 156.17 83 79 167 23 93 149 2 3 3 1 2 3 15913 21871 1424 21046 50706;50707 58778;58779;58780 58778 3 VTGQFPWSSLR Unmodified 1276.6564 0.65642086 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 11 0 1 70.904 70.904 2 0.00071898 20518 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.112 62.736 69.148 0 100.28 0 0 0 65 0 93 0 0 0 1 0 1 0 0 0 13352 21872 2379 21047 50708 58781 58781 1 VTHAVVTVPAYFNDAQR Unmodified 1886.9639 0.96389585 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 0 10 3 1 1 58.373 58.373 3 7.067E-06 20187 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 87.388 67.295 59.76 65.13 0 49.042 65.737 0 56 65 0 46 65 0 1 1 0 1 1 0 16770 21873 1419 21048 50709;50710 58782;58783 58783 2 VTHLSTLQVGSLSVK Unmodified 1567.8934 0.89335667 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8;D3YWI0;D3YUX8 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 5.5 4.5 1 1 61.823 61.823 3 3.5198E-05 16770 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.663 60.79 158.63 226.27 18.028 199.2 160.53 185.17 149 223 19 186 167 178 2 2 1 2 1 1 18544 21874 158 21049 50711;50712 58784;58785 58785 2 VTHYFIDLNK Unmodified 1248.6503 0.65027285 2582 Q8K0S0;E0CXJ1 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes no 0 0 0 0 9.5 0.5 1 1 62.654 62.654 2;3 0.0013922 17119 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.977 38.454 0 0 0 9.837 56 39.442 0 0 0 9 56 37 0 0 0 1 1 1 9482.1 21875 2582 21050 50713;50714 58786;58787 58787 2 VTHYFIDLNKK Unmodified 1376.7452 0.74523587 2582 Q8K0S0;E0CXJ1 Phyhip Phytanoyl-CoA hydroxylase-interacting protein yes no 0 0 0 1 10.8 1.48 1 1 1 1 57.812 57.812 3;4 0.00045993 14599 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.659 61.826 276.76 290.09 332.96 216.08 399.19 209.42 260 287 334 213 398 203 2 2 3 2 3 2 79015 21876 2582 21051 50715;50716;50717;50718 58788;58789;58790;58791 58790 4 VTIAQGGVLPNIQAVLLPK Unmodified 1930.1615 0.16153303 645 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4;Q6GSS7;A0A0N4SV66;Q8CGP4;Q8R1M2;Q64523 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a;Hist2h2aa1;Hist1h2aa;H2afj;Hist2h2ac Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3;Histone H2A type 2-A;Histone H2A;Histone H2A.J;Histone H2A type 2-C yes no 0 0 0 0 7.64 5.07 4 1 3 2 1 91.056 91.056 2;3;4 7.5994E-27 35905 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 136.36 118.22 972.22 214.33 1289.9 1132.4 1290.3 440.54 913 213 1242 1126 1283 420 10 7 9 11 6 11 1353200 21877 645 21052 50719;50720;50721;50722;50723;50724;50725;50726;50727;50728;50729 58792;58793;58794;58795;58796;58797;58798;58799;58800;58801;58802;58803;58804;58805;58806;58807;58808 58808 17 VTIAQGGVLPNIQAVLLPK Deamidation (N) 1931.1455 0.14554861 645 C0HKE7;C0HKE5;Q8CGP7;Q8CGP5;Q8CGP6;Q8BFU2;C0HKE9;C0HKE8;C0HKE1;C0HKE6;C0HKE3;C0HKE2;C0HKE4;Q6GSS7;A0A0N4SV66;Q8CGP4;Q8R1M2;Q64523 Hist1h2ak;Hist1h2af;Hist1h2ah;Hist3h2a;Hist2h2aa1;Hist1h2aa;H2afj;Hist2h2ac Histone H2A type 1-K;Histone H2A type 1-F;Histone H2A type 1-H;Histone H2A type 3;Histone H2A type 2-A;Histone H2A;Histone H2A.J;Histone H2A type 2-C yes no 0 1 0 0 10 0 2 94.47 94.47 3 0.00075779 30395 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.493 31.897 20.387 0 0 0 32.332 33.189 19 0 0 0 32 32 1 0 0 0 1 1 2338.1 21878 645 21052 50730;50731 58809;58810 58810 185 2 VTIEYYSQLK Unmodified 1242.6496 0.64960415 1958 Q3U367;Q9JLJ2 Aldh9a1 4-trimethylaminobutyraldehyde dehydrogenase yes no 0 0 0 0 8 0 1 66.87 66.87 2 0.00011525 21862 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.26 57.887 0 38.901 27.962 0 66.701 37.539 0 37 28 0 65 37 0 1 1 0 1 1 2570.6 21879 1958 21053 50732 58811 58811 1 VTILELFR Unmodified 989.59097 0.59096706 1406 P17809 Slc2a1 Solute carrier family 2, facilitated glucose transporter member 1 yes yes 0 0 0 0 11.5 0.5 1 1 85.977 85.977 2 0.0085837 24058 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 102.46 66.585 0 41.496 0 41.63 53.013 45.391 0 39 0 39 54 44 0 1 0 1 1 1 30172 21880 1406 21054 50733;50734 58812;58813 58813 2 VTILGHVQR Unmodified 1021.6033 0.60326308 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 8 5.1 1 1 1 44.358 44.358 3 0.0011133 9487 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.749 40.64 78.523 140.53 124.14 172.79 198.81 184.05 74 139 130 167 204 176 1 2 2 2 2 2 43217 21881 2507 21055 50735;50736;50737 58814;58815;58816 58815 3 VTITFMK Unmodified 838.46226 0.46226107 2080 Q60676;F7BX26 Ppp5c Serine/threonine-protein phosphatase 5;Serine/threonine-protein phosphatase yes no 0 0 0 0 11 1 1 1 67.778 67.778 2 0.025802 16895 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.19 54.47 89.059 59.018 33.856 128.88 71.893 136.53 83 56 37 121 74 130 1 1 1 2 1 2 7813.2 21882 2080 21056 50738;50739 58817;58818 58818 2 VTKPLLLK Unmodified 910.62154 0.62153891 3371 Q9Z140;Q3UYN2 Cpne6 Copine-6 yes no 0 0 0 1 12 0 2 58.484 58.484 3;4 0.016803 13649 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.985 22.919 324.2 274.99 382.36 287.91 42.668 430.51 305 285 382 285 46 405 1 2 2 2 1 2 443190 21883 3371 21057 50740;50741 58819;58820 58820 2 VTLAANGK Deamidation (N) 773.42832 0.42831841 1544 P43006 Slc1a2 Excitatory amino acid transporter 2 yes yes 0 1 0 0 8.33 2.29 1 2 1 1 1 48.883 48.883 2;3 0.0098173 14934 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 82.452 30.665 628.75 1065.6 1677 1095 741.09 1756.9 591 1055 1657 1106 795 1668 3 3 5 5 3 5 181920 21884 1544 21058 50742;50743;50744;50745;50746;50747 58821;58822;58823;58824;58825;58826 58821 575 6 VTLATLK Unmodified 744.47454 0.47454032 2056 Q5SQB0;Q61937;Q9DAY9;Q5SQB5 Npm1 Nucleophosmin yes no 0 0 0 0 10 0.816 1 1 1 60.01 60.01 2 0.0082148 16023 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 127.12 6.4726 369.84 427.04 570.79 681.63 536.89 411.33 348 432 581 664 549 397 2 3 4 4 3 2 179970 21885 2056 21059 50748;50749;50750 58827;58828;58829;58830 58829 4 VTLDPELEEALASASDTELYDLAAVLGVHNLLNNPK Unmodified 3833.9575 0.95747965 3232 Q9JKK7;A0A1L1SU70 Tmod2 Tropomodulin-2 yes no 0 0 0 0 13 0 1 114.15 114.15 4 8.7448E-08 44809 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.795 38.635 0 6.384 0 4.372 0 0 0 6 0 4 0 0 0 1 0 1 0 0 877.79 21886 3232 21060 50751 58831 58831 1 VTLEYRPVIDK Unmodified 1331.7449 0.74490152 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 1 8 0 1 59.048 59.048 3 0.001681 18212 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.593 42.179 306.4 341.93 332.03 236.73 366.5 372.24 289 346 337 241 373 359 2 2 2 2 2 2 43097 21887 2597 21061 50752 58832;58833 58832 2 VTLGTQPTVLR Unmodified 1183.6925 0.69247202 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 8.5 0.5 1 1 56.689 56.689 2 0.00027312 17045 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.009 55.951 59.647 34.597 121.95 123.76 64.994 0 56 37 120 121 65 0 1 1 2 2 1 0 16036 21888 1955 21062 50753;50754 58834;58835 58834 2 VTLLDASEYECEVEK Unmodified 1783.8186 0.81859633 526 A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb4.1l1;Epb41l1 Band 4.1-like protein 1 yes no 0 0 0 0 7.33 4.03 1 1 1 73.561 73.561 2;3;4 5.4883E-05 27026 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 85.457 68.773 78.828 0 96.492 84.968 19.874 0 74 0 93 83 19 0 2 0 1 1 1 0 19844 21889 526 21063 50755;50756;50757 58836;58837;58838 58836 3 VTLLDGSEYGCDVDKR Unmodified 1825.8516 0.85162779 3345 Q9WV92;A7YY80;A0A286YCY8;A0A286YDD0;A0A286YD94 Epb41l3;Epb4.1l3 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed yes no 0 0 0 1 13 0 1 59.805 59.805 3 0.0098083 21056 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 43.904 22.063 147.46 125.43 176.49 127.32 226.03 161.98 139 130 176 130 227 158 1 1 1 1 1 1 12251 21890 3345 21064 50758 58839 58839 1 VTLLDGTEYSCDLEK Unmodified 1741.808 0.80803164 1250 Q80UE5;O70318;Q80UE4;A0A1W2P6I5 Epb4.1l2;Epb41l2 Band 4.1-like protein 2 yes no 0 0 0 0 13 0 1 72.87 72.87 3 1.6935E-05 27408 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.316 57.516 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21891 1250 21065 50759 58840 58840 1 VTLLEGDHVR Unmodified 1137.6142 0.6142217 2566 Q8JZN2;Q91W50;A0A0G2JF72 Csde1 Cold shock domain-containing protein E1 yes no 0 0 0 0 5.5 0.5 1 1 48.926 48.926 3 0.0011111 14846 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.841 42.521 0 88.766 36.472 48.518 36.108 98.108 0 84 37 47 37 93 0 2 1 2 1 2 4962 21892 2566 21066 50760;50761 58841;58842;58843 58843 3 VTLPAGPDILR Unmodified 1150.671 0.67100829 2411 Q8BI08 Mal2 Protein MAL2 yes yes 0 0 0 0 7.5 0.5 1 1 69.388 69.388 2 1.2643E-07 22972 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.61 62.165 108.48 59.991 234.87 245.35 215.95 145.42 102 65 231 241 222 139 1 1 2 2 2 1 50932 21893 2411 21067 50762;50763 58844;58845 58845 2 VTLPVPDQEGQEEFYVLGEDAR Unmodified 2490.1914 0.19144876 2888 Q99PL6 Ubxn6 UBX domain-containing protein 6 yes yes 0 0 0 0 4.5 0.5 1 1 82.747 82.747 3 1.9205E-09 31243 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 63.165 46.859 0 9.576 0 9.6683 36.97 0 0 9 0 9 37 0 0 1 0 1 2 0 4793.1 21894 2888 21068 50764;50765 58846;58847 58846 2 VTLSEGPHHVALFK Unmodified 1533.8304 0.83036248 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 8 0 1 55.104 55.104 4 3.9843E-05 16239 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.565 60.612 59.324 54.204 82.511 84.044 93.417 0 56 56 83 83 93 0 1 1 1 1 1 0 8331.5 21895 1653 21069 50766 58848 58848 1 VTLSFPSTLQTGTGTLK Unmodified 1749.9513 0.95126548 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F6V7K3 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 9.75 3.46 1 3 2 1 1 76.281 76.281 2;3;4 7.4598E-13 22738 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.02 92.429 297.86 102 281.03 155.46 301.69 222.06 279 102 270 149 297 214 7 3 6 4 5 6 104510 21896 1899 21070 50767;50768;50769;50770;50771;50772;50773;50774 58849;58850;58851;58852;58853;58854;58855;58856;58857;58858;58859 58855 11 VTLSNQPYIK Unmodified 1161.6394 0.63937381 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 0 0 0 9.2 3.4 1 1 2 1 1 1 1 2 58.305 58.305 2;3 1.2199E-37 20063 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 200.11 114.44 861.97 794.45 998.5 786.2 1004.8 922.97 817 799 983 765 1020 890 9 8 8 6 7 7 686670 21897 309 21071 50775;50776;50777;50778;50779;50780;50781;50782;50783;50784 58860;58861;58862;58863;58864;58865;58866;58867;58868;58869;58870 58869 11 VTLTLPVLNAAQSIIFVATGEGK Unmodified 2341.3257 0.32569782 2911 Q9CQ60;Q8CBG6;D3Z4X1 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 6.75 5.76 2 1 1 113.65 113.65 3;4 7.7138E-16 35340 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.09 79.299 0 0 21.131 11.422 23.484 11.374 0 0 20 11 23 11 0 0 3 2 3 2 3873.7 21898 2911 21072 50785;50786;50787;50788 58871;58872;58873;58874 58872 4 VTLTPEEEAR Unmodified 1143.5772 0.57716749 1315 Q564E2;P06151;A0A1B0GSX0;A0A1B0GSR9 Ldha L-lactate dehydrogenase;L-lactate dehydrogenase A chain yes no 0 0 0 0 6.2 3.54 1 1 1 1 1 46.889 46.889 2 2.3211E-21 14774 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 186.16 120.09 789.27 527.44 834.71 604.85 595.77 760.9 742 537 829 593 614 728 7 4 7 5 6 6 338000 21899 1315 21073 50789;50790;50791;50792;50793 58875;58876;58877;58878;58879;58880;58881;58882 58877 8 VTLVQTLEIQR Unmodified 1298.7558 0.75580056 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0 1 68.933 68.933 2 0.0095917 22794 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.598 30.413 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 2394.9 21900 3266 21074 50794 58883 58883 1 VTLVSAAPEK Unmodified 1013.5757 0.57571092 2939 Q9CQR4 Acot13 Acyl-coenzyme A thioesterase 13;Acyl-coenzyme A thioesterase 13, N-terminally processed yes yes 0 0 0 0 8 0.816 1 1 1 55.907 55.907 2;3 1.7146E-08 16596 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 147.75 66.112 118.67 235.64 128.31 146.32 166.42 241.5 112 231 130 139 167 231 2 3 2 2 2 3 53578 21901 2939 21075 50795;50796;50797 58884;58885;58886 58885 3 VTMILQSPSFR Unmodified 1277.6802 0.68019277 3275 Q9QYB8;A0A0N4SWF0 Add2 Beta-adducin yes no 0 0 0 0 12 0 1 70.929 70.929 2 0.05068 18057 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.108 24.371 39.522 0 30.097 0 0 0 37 0 28 0 0 0 1 0 1 0 0 0 9517.7 21902 3275 21076 50798 58887 58887 1 VTMQNLNDR Unmodified 1089.5237 0.52369213 659 CON__P13645;CON__P02535-1;A2A513;P02535;CON__A2A4G1;B1AQ77;CON__Q7Z3Y8;Q61414;CON__Q7Z3Y7;CON__P02533;CON__Q148H6;CON__Q7Z3Z0;CON__P08779;CON__Q3ZAW8;CON__Q9Z2K1;CON__Q7Z3Y9;Q9Z320;Q61781;Q8VCW2;Q9Z2K1 Krt10;Krt15;Krt27;Krt14;Krt25;Krt16 Keratin, type I cytoskeletal 10;Keratin, type I cytoskeletal 15;Keratin, type I cytoskeletal 27;Keratin, type I cytoskeletal 14;Keratin, type I cytoskeletal 25;Keratin, type I cytoskeletal 16 yes no 0 0 0 0 6 0 1 44.716 44.716 2 0.022086 12884 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.184 4.0313 88.673 23.055 45.335 58.506 0 59.696 83 28 46 56 0 56 1 1 1 1 0 1 5258.5 + 21903 659 21077 50799 58888 58888 1 VTNDARENEMDENLEQVSGIIGNLR Unmodified 2815.3406 0.34064897 1681 P60879 Snap25 Synaptosomal-associated protein 25 yes yes 0 0 0 1 5 0 1 78.219 78.219 3 0.00012411 29291 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 48.984 41.087 20.265 0 20.456 0 0 0 19 0 19 0 0 0 1 0 1 0 0 0 2377.8 21904 1681 21078 50800 58889 58889 1 VTNEFVHINNLK Unmodified 1426.7569 0.75686319 134 A0A0N4SVL9;Q9CQR6 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 0 8 0 1 59.787 59.787 3 0.041815 18588 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 37.998 14.393 88.037 70.933 111.66 84.064 0 99.138 83 74 111 83 0 93 1 1 1 1 0 1 5292.4 21905 134 21079 50801 58890 58890 1 VTNEYNESLLYSPEEPK Unmodified 2010.9422 0.94221693 2504 Z4YK42;Q8C5H8 Nadk2 NAD kinase 2, mitochondrial yes no 0 0 0 0 4 0 1 66.458 66.458 3 2.656E-06 23782 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.239 58.573 29.742 27.324 27.655 19.119 0 0 28 28 28 19 0 0 1 1 1 1 0 0 3634.4 21906 2504 21080 50802 58891 58891 1 VTNGAFTGEISPGMIK Deamidation (N) 1621.8022 0.8021584 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 1 0 0 8.5 2.69 1 1 1 1 73.062 73.062 2;3 2.3413E-11 25438 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 89.136 60.428 257.51 262.81 298.05 0 300.31 362.4 242 268 289 0 299 348 2 3 2 0 3 3 67648 21907 1405 21081 50803;50804;50805;50806 58892;58893;58894;58895 58893 508 4 VTNGAFTGEISPGMIK Unmodified 1620.8181 0.81814282 1405 P17751 Tpi1 Triosephosphate isomerase yes yes 0 0 0 0 8 0 1 69.8 69.8 3 4.6176E-09 23250 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.636 55.947 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21908 1405 21081 50807 58896 58896 1 VTNGELLAQYMAEAASELGPSTPYGK Deamidation (N) 2697.2844 0.28436287 533 A2AWI7;A2AWI9;Q8R3V5 Sh3glb2 Endophilin-B2 yes no 0 1 0 0 6.5 0.5 1 1 103.49 103.49 4 1.8669E-16 37075 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 75.326 62.893 6.4187 10.11 15.576 12.639 15.797 26.199 6 10 15 12 16 25 1 2 2 2 2 3 5580 21909 533 21082 50808;50809 58897;58898;58899 58898 140 3 VTNLLMLK Unmodified 930.55722 0.55722409 963 F7DCW4;E9QMW9;Q8CB58;Q8BGJ5;Q922I7;F7C521;G8JL74;G3UXA6;Q8BHD7;P17225 Ptbp1;Ptbp3 Polypyrimidine tract-binding protein 3;Polypyrimidine tract-binding protein 1 yes no 0 0 0 0 11.5 0.5 1 1 75.1 75.1 2 0.013394 20174 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.308 0 169.09 87.55 75.863 94.39 145.53 312.45 158 93 74 93 148 297 1 1 1 1 1 2 24434 21910 963 21083 50810;50811 58900;58901 58901 2 VTNPNAR Unmodified 770.4035 0.40350064 1756 P62911 Rpl32 60S ribosomal protein L32 yes yes 0 0 0 0 6 0 1 26.055 26.055 2 0.007051 4369 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 130 60.767 44.238 79.878 71.472 80.367 91.479 61.35 42 79 74 79 93 60 1 1 1 1 1 1 7110 21911 1756 21084 50812 58902 58902 1 VTNSSVWVEP Unmodified 1116.5451 0.54513908 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 8 3.56 1 1 1 69.348 69.348 2 0.0054647 25124 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.378 53.23 98.989 148.31 148.59 151.51 74.206 245.19 93 148 148 148 74 232 2 3 2 3 1 3 27664 21912 2319 21085 50813;50814;50815 58903;58904;58905 58903 3 VTNSTELQHQLEK Unmodified 1525.7736 0.77363546 2424 Q8BL66 Eea1 Early endosome antigen 1 yes yes 0 0 0 0 6 0 1 49.138 49.138 3 0.033825 14860 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.337 17.674 0 47.979 57.713 0 38.702 0 0 46 56 0 37 0 0 1 1 0 1 0 3601.6 21913 2424 21086 50816 58906 58906 1 VTNVGSLLLTPQENESLFSFLGK Unmodified 2492.3163 0.31625535 2770 Q91YD9;Q9CXQ9 Wasl Neural Wiskott-Aldrich syndrome protein yes no 0 0 0 0 9.5 0.5 1 1 102.13 102.13 3 2.3697E-16 33079 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.3 86.344 0 0 6 0 0 0 0 0 6 0 0 0 0 0 1 0 0 0 3181 21914 2770 21087 50817;50818 58907;58908 58908 2 VTPEEEEEDEDGIIMIR Unmodified 2002.9041 0.90411687 2114 Q61165 Slc9a1 Sodium/hydrogen exchanger 1 yes yes 0 0 0 0 2 0 1 68.477 68.477 3 0.035348 24833 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 32.341 21.748 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21915 2114 21088 50819 58909 58909 1 VTPLEIEVLEETVQTMDTS Unmodified 2133.0399 0.039882069 1800 P70195 Psmb7 Proteasome subunit beta type-7 yes yes 0 0 0 0 7 3.54 1 1 1 1 111.23 111.23 3 1.4002E-11 36845 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.559 75.851 0 4.256 0 0 8.0256 7.2901 0 4 0 0 8 7 0 1 0 0 2 1 6596 21916 1800 21089 50820;50821;50822;50823 58910;58911;58912;58913;58914;58915 58912 6 VTPNPDLLDLVQTADEK Unmodified 1866.9575 0.95747307 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 8 3.56 1 1 1 83.95 83.95 3 1.4795E-12 31181 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 120.9 90.416 73.94 49.002 0 110.43 114.11 82.819 69 47 0 103 116 79 2 2 0 3 3 3 20586 21917 894 21090 50824;50825;50826 58916;58917;58918;58919 58918 4 VTPQSDGSSSK Unmodified 1091.5095 0.50948185 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 5.33 0.471 2 1 35.147 35.147 2;3 5.3897E-05 8823 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.898 46.113 40.434 97.178 25.28 90.305 27.961 117.53 38 93 28 84 28 111 2 2 1 2 1 3 15100 21918 1957 21091 50827;50828;50829 58920;58921;58922 58920 3 VTQDATPGSALDK Unmodified 1301.6463 0.64630969 2563 Q8JZK9 Hmgcs1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic yes yes 0 0 0 0 5 0 1 51.083 51.083 3 0.064765 16538 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 32.523 3.224 59.756 34.901 26.169 38.881 0 0 56 37 28 37 0 0 1 1 1 1 0 0 1924.9 21919 2563 21092 50830 58923 58923 1 VTQEEIK Unmodified 845.44945 0.44944778 891 E9Q317;O55128;D3YY55 Gm10094;Sap18 Histone deacetylase complex subunit SAP18 yes no 0 0 0 0 5 0 1 44.151 44.151 2 0.050256 13142 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.478 1.2883 118.79 61.15 0 90.719 0 88.478 111 65 0 83 0 83 1 1 0 1 0 1 2386.7 21920 891 21093 50831 58924 58924 1 VTQILQSPAFR Unmodified 1258.7034 0.70337105 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 10.5 0.5 1 1 67.545 67.545 2 5.6815E-08 19407 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.65 81.329 172.3 143.59 135.41 0 121.25 124.46 162 148 130 0 120 120 2 2 1 0 1 1 26199 21921 3274 21094 50832;50833 58925;58926 58925 2 VTQINDR Unmodified 844.44028 0.44028008 885 P0C7L0;E9Q2D0;D3Z5R4 Wipf3 WAS/WASL-interacting protein family member 3 yes no 0 0 0 0 5 0 1 34.815 34.815 2 0.057757 8628 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.486 20.608 20.093 58.229 0 40.441 0 69.29 19 56 0 37 0 65 1 1 0 1 0 1 2996 21922 885 21095 50834 58927 58927 1 VTQLASYFEPLILAAVGVASK Unmodified 2176.2144 0.21435646 287 E9PUM4;A0A1L1SQ51;Q71LX4;Q8CDM9;A0A1L1SRI1;A0A1L1SQP9 Tln2 Talin-2 yes no 0 0 0 0 1 0 1 121.82 121.82 3 0.00026198 36484 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 48.656 38.735 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 864.22 21923 287 21096 50835 58928 58928 1 VTQSNFAVGYK Unmodified 1212.6139 0.61388734 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 9.88 1.9 1 1 2 1 1 1 1 56.657 56.657 2;3 2.1493E-14 19293 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 160.18 106.03 1531.7 529.95 1441.9 1710.7 767.97 1230.6 1437 585 1430 1657 831 1175 5 2 4 7 4 6 393930 21924 978;2097 21097 50836;50837;50838;50839;50840;50841;50842;50843 58929;58930;58931;58932;58933;58934;58935;58936 58936 8 VTQVDFLPR Unmodified 1073.5869 0.58694431 743 O88485;D3Z0M6;Q3TYJ3 Dync1i1 Cytoplasmic dynein 1 intermediate chain 1 yes no 0 0 0 0 7.5 0.5 1 1 64.647 64.647 2 0.0017659 20685 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 98.249 60.69 59.294 73.55 138.41 163.25 63.57 0 56 74 139 158 65 0 1 1 2 2 1 0 19935 21925 743 21098 50844;50845 58937;58938 58938 2 VTQVDGNSPVR Unmodified 1170.5993 0.59929991 2073 Q5XJY5 Arcn1 Coatomer subunit delta yes yes 0 0 0 0 5 0 1 40.682 40.682 2 0.0017549 11447 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.507 43.478 39.347 26.521 36.979 28.4 0 69.29 37 28 37 28 0 65 1 1 1 1 0 1 3074.3 21926 2073 21099 50846 58939 58939 1 VTSAVEALLSADSASR Unmodified 1575.8104 0.8104149 1641 Q3U4W8;P56399;D3YYA5 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 8 0.816 1 1 1 81.296 81.296 2;3 2.1868E-16 27930 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.89 89.221 28 38.901 27.962 0 19.874 0 28 37 28 0 19 0 1 1 1 0 1 0 13653 21927 1641 21100 50847;50848;50849 58940;58941;58942 58942 3 VTSAYLQDIENAYK Unmodified 1613.7937 0.7937022 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 75.811 75.811 2;3 8.5237E-12 28701 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.38 89.498 296.89 235.61 217.04 125.87 136.96 322.29 279 241 213 120 138 306 4 3 3 2 3 5 36786 21928 2859 21101 50850;50851;50852;50853 58943;58944;58945;58946;58947 58947 5 VTSAYLQDIENAYKK Unmodified 1741.8887 0.88866522 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 1 10 3 1 1 70.823 70.823 4 0.00061252 24440 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.55 25.938 167.64 142.88 196.87 105.61 211.71 181.57 158 148 195 111 213 176 2 2 2 2 2 2 14991 21929 2859 21102 50854;50855 58948;58949 58948 2 VTSELLR Unmodified 816.47052 0.47051757 1967 Q3UE92;Q6P1B1;S4R1I3;S4R228 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 7 0 1 51.503 51.503 2 0.023573 15225 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.677 12.383 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21930 1967 21103 50856 58950 58950 1 VTSENGATASGR Deamidation (N) 1149.5262 0.52619455 2308 Q80U04 Pja2 E3 ubiquitin-protein ligase Praja-2 yes yes 0 1 0 0 3 0 1 30.161 30.161 2 2.6712E-13 7497 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 136.81 93.942 9.5993 0 9.6896 0 14.644 0 9 0 9 0 14 0 1 0 1 0 1 0 1395.3 21931 2308 21104 50857 58951 58951 910 1 VTSEPEAVSER Unmodified 1202.5779 0.57789577 1424 P20357;G3UZK9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 4.6 4.32 1 1 1 1 1 39.076 39.076 2;3 3.7277E-21 11685 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 179.31 121.35 20.387 295.86 250.81 203.9 248.63 262.37 19 287 252 204 252 252 1 3 2 2 2 2 151850 21932 1424 21105 50858;50859;50860;50861;50862 58952;58953;58954;58955;58956 58954 5 VTSFTLAK Unmodified 865.49092 0.49091866 1914 Q3TCN2 Plbd2 Putative phospholipase B-like 2;Putative phospholipase B-like 2 28 kDa form;Putative phospholipase B-like 2 40 kDa form;Putative phospholipase B-like 2 15 kDa form yes yes 0 0 0 0 10 0 1 61.718 61.718 2 0.02978 16797 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.625 3.9136 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21933 1914 21106 50863 58957 58957 1 VTSHAIVK Unmodified 853.50215 0.50215205 154 A0A0R4J036;P08553 Nefm Neurofilament medium polypeptide yes no 0 0 0 0 8.5 0.5 1 1 37.854 37.854 3 0.0011948 8259 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.41 78.28 826.92 563.01 790.69 732.5 796.75 755.69 777 592 796 727 805 727 2 2 3 3 2 2 83137 21934 154 21107 50864;50865 58958;58959;58960 58958 3 VTSLEEELTDLR Unmodified 1403.7144 0.71438925 2227 Q6P9Q6;Q80YW9 Fkbp15 FK506-binding protein 15;Peptidyl-prolyl cis-trans isomerase yes no 0 0 0 0 4 0 1 76.914 76.914 3 0.0025441 28628 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 54.7 31.782 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 754.75 21935 2227 21108 50866 58961 58961 1 VTSLTACLVNQNLR Unmodified 1587.8403 0.84027524 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 0 0 0 9.43 3.66 1 1 2 1 1 1 69.275 69.275 2;3 5.3858E-149 20124 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 257.09 197.16 415.59 312.38 348.21 199.63 400.33 191.33 390 315 336 192 392 182 6 4 5 5 5 4 841180 21936 309 21109 50867;50868;50869;50870;50871;50872;50873 58962;58963;58964;58965;58966;58967;58968;58969;58970 58964 9 VTSLTACLVNQNLR Deamidation (N) 1588.8243 0.82429083 309 A0A1L1SUX8;P01831 Thy1 Thy-1 membrane glycoprotein yes no 0 1 0 0 8.33 0.471 2 1 70.506 70.506 2;3 1.8063E-27 23109 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 156.58 113.86 69.401 0 57.772 108.08 56.265 39.442 65 0 56 103 56 37 2 0 1 3 2 1 14091 21937 309 21109 50874;50875;50876 58971;58972;58973 58971 87;88 3 VTSNLGK Unmodified 717.4021 0.40210366 3344 Q9WV69 Dmtn Dematin yes yes 0 0 0 0 8 0 1 43.742 43.742 2 0.027615 10934 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.492 17.023 149.03 0 200.58 216.8 157.71 265.2 140 0 195 212 169 253 1 0 1 1 1 1 15086 21938 3344 21110 50877 58974 58974 1 VTSSGTSTTHR Unmodified 1132.5473 0.54726434 826 E9PV24 Fga Fibrinogen alpha chain;Fibrinopeptide A;Fibrinogen alpha chain yes yes 0 0 0 0 5.5 0.5 1 1 20.273 20.273 3 3.1783E-08 2858 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 108.9 70.336 6.438 9.576 0 9.837 9.414 0 6 9 0 9 9 0 1 1 0 1 1 0 1006.7 21939 826 21111 50878;50879 58975;58976 58976 2 VTSTEFISLR Unmodified 1151.6186 0.61863837 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4;D3Z1M7 Synj1 Synaptojanin-1 yes no 0 0 0 0 10 3 1 1 63.598 63.598 2 0.008387 22758 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.893 33.793 0 222.6 241.26 235.21 211.99 0 0 213 245 232 213 0 0 2 2 2 2 0 34604 21940 927 21112 50880;50881 58977;58978 58978 2 VTSYASLFAQALPR Unmodified 1522.8144 0.81437807 1657 P58854;E9Q0R3 Tubgcp3 Gamma-tubulin complex component 3 yes no 0 0 0 0 11 0 1 82.836 82.836 3 6.1229E-05 25874 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 75.088 58.555 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2024.4 21941 1657 21113 50882 58979 58979 1 VTTDQEK Unmodified 819.39741 0.39741221 1424 P20357;G3UZK9;G3UZE9 Map2 Microtubule-associated protein 2 yes no 0 0 0 0 5 0.816 1 1 1 35.301 35.301 2 0.02131 9344 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.57 40.316 29.609 134.67 35.041 125.77 175.36 86.149 28 129 37 120 176 83 1 2 1 3 3 1 8580.2 21942 1424 21114 50883;50884;50885 58980;58981;58982 58980 3 VTTEDPAR Unmodified 887.43486 0.43486035 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 3.5 0.5 1 1 32.489 32.489 2 0.0063253 8005 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 109.36 59.998 138.1 96.688 151.19 54.91 109.92 106.7 130 102 148 56 111 102 2 2 2 1 2 1 23761 21943 974 21115 50886;50887 58983;58984 58984 2 VTTEEYQK Unmodified 996.47639 0.47639081 742 D3Z0L4;Q9D9P1;Q9CRB9;F6QFL0 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 5 0 1 43.072 43.072 2 0.0030214 12591 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.31 73.527 0 77.638 65.672 0 103.39 96.188 0 74 65 0 102 93 0 1 1 0 1 1 6280.1 21944 742 21116 50888 58985 58985 1 VTTGAPIPCGADAVVQVEDTELIR Unmodified 2510.2687 0.26865323 416 A0JNY3;Q8BUV3 Gphn Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase yes no 0 0 0 0 4 0 1 78.659 78.659 3 0.0019907 29354 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.693 31.7 0 0 0 9.6683 8.9699 0 0 0 0 9 9 0 0 0 0 1 1 0 2779 21945 416 21117 50889 58986 58986 1 VTTGVAAEWK Unmodified 1060.5553 0.55530983 2736 Q91VD9;A0A087WSU3 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 7.8 2.64 2 2 1 58.538 58.538 2;3 5.6245E-05 18639 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.53 59.927 167.97 196.65 288.91 201.52 225.11 241.95 158 195 287 204 232 232 2 2 3 3 3 2 31747 21946 2736 21118 50890;50891;50892;50893;50894 58987;58988;58989;58990;58991 58989 5 VTTHPLAK Unmodified 865.50215 0.50215205 2868 Q99LX0;A2A813;A2A815 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 38.575 38.575 3 0.0020326 10498 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.798 43.641 1448.6 831.22 1292.3 1196.6 1426 1344.7 1371 840 1268 1188 1441 1290 8 6 5 7 6 6 235740 21947 2868 21119 50895;50896;50897;50898;50899;50900 58992;58993;58994;58995;58996;58997;58998;58999;59000 59000 9 VTTLPGHIQAVYVQNVVK Unmodified 1965.1047 0.10474643 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 9 0 1 66.189 66.189 3 4.3111E-07 20862 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 91.657 55.998 49.358 0 0 0 38.702 0 46 0 0 0 37 0 1 0 0 0 1 0 2686.2 21948 1220 21120 50901 59001 59001 1 VTTTSQEYDR Unmodified 1198.5466 0.54659564 171 A0A0R4J0F6;Q99KY4;F7BG02 Gak Cyclin-G-associated kinase yes no 0 0 0 0 3.5 0.5 1 1 35.509 35.509 2 1.1637E-07 9413 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 142 94.421 9.657 40.432 0 19.859 56.977 20.005 9 38 0 19 56 19 1 1 0 1 2 1 5249.6 21949 171 21121 50902;50903 59002;59003 59003 2 VTTVLQPCDLFYQATQLGR Unmodified 2209.1201 0.1201385 2048 Q5H8C4;A0A286YCT3 Vps13a Vacuolar protein sorting-associated protein 13A yes no 0 0 0 0 10 0 1 90.002 90.002 3 3.2181E-05 29218 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.073 41.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1379.1 21950 2048 21122 50904 59004 59004 1 VTTVVATPGQGPDRPQEVSYTDTK Unmodified 2545.266 0.26601069 947 E9QAQ5;Q9WV60 Gsk3b Glycogen synthase kinase-3 beta yes no 0 0 0 1 5.5 0.5 1 1 54.429 54.429 4 8.6798E-05 17456 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 49.497 39.346 89.635 54.947 36.989 48.658 74.166 67.174 84 56 37 47 74 65 3 2 1 2 2 2 7618 21951 947 21123 50905;50906 59005;59006;59007 59007 3 VTTVVATVGQGPER Unmodified 1412.7623 0.7623425 787 D3Z7E5;Q2NL51 Gsk3a Glycogen synthase kinase-3 alpha yes no 0 0 0 0 7 0 1 55.127 55.127 2 0.00056092 16936 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.653 56.692 0 39.078 17.334 19.734 0 0 0 37 19 19 0 0 0 1 1 1 0 0 2865.8 21952 787 21124 50907 59008 59008 1 VTVAGLAGK Unmodified 814.49125 0.49125301 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 0 0 9.8 0.748 2 2 1 56.963 56.963 2;3 0.0018333 14611 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.221 13.504 589.78 411.81 615.22 531.14 284.29 838.29 555 418 608 511 288 794 5 3 4 4 2 4 130300 21953 2868 21125 50908;50909;50910;50911;50912 59009;59010;59011;59012;59013 59011 5 VTVAGLAGKDPVQCSR Unmodified 1656.8617 0.86173896 2868 Q99LX0;A2A813;A2A815;A2A817;A2A816 Park7 Protein deglycase DJ-1 yes no 0 0 0 1 10.2 1.72 1 1 1 1 1 55.03 55.03 3 1.4146E-16 15552 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 125.5 97.559 537.47 420.92 809.02 494.05 601.78 398.18 506 428 792 501 595 381 3 3 5 5 4 3 128790 21954 2868 21126 50913;50914;50915;50916;50917 59014;59015;59016;59017;59018;59019 59015 6 VTVDHAEEATVGQAEEATVGQAEK Unmodified 2468.1667 0.16669058 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 2.4 0.49 3 2 60.509 60.509 3;4;5 9.5758E-19 21028 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.57 89.515 67.305 29.792 69.133 103.11 168.11 114.38 63 28 66 101 169 110 3 1 3 6 6 4 35573 21955 692 21127 50918;50919;50920;50921;50922 59020;59021;59022;59023;59024;59025 59021 6 VTVDQAEEATVGQAEEATVGHTEK Unmodified 2498.1773 0.17725526 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 2.5 0.5 1 1 64.63 64.63 3;4 7.1447E-13 23273 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 77.894 70.055 0 20.216 0 20.767 19 20.254 0 19 0 19 19 19 0 1 0 1 1 1 6126.2 21956 692 21128 50923;50924 59026;59027 59027 2 VTVDQAEEPTVDQAEEAISSHAPDLK Unmodified 2778.3196 0.3195624 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 3 0 1 72.611 72.611 4 6.6593E-05 27127 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 44.3 31.452 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 1609.8 21957 692 21129 50925 59028 59028 1 VTVDQAEETTVGQAEEATVGQAGEAILSQAK Unmodified 3129.5313 0.53134609 692 H3BIV5;D3YVF0 Akap5 A-kinase anchor protein 5 yes no 0 0 0 0 3.5 0.5 1 1 84.853 84.853 4 4.6582E-19 32194 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 74.13 62.878 9 3.192 0 6.1736 20.437 5.8128 9 3 0 6 20 6 1 1 0 1 1 1 4180.8 21958 692 21130 50926;50927 59029;59030 59030 2 VTVEDLFSEDFK Unmodified 1427.682 0.68202649 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 5 0 1 85.943 85.943 3 2.5832E-05 32799 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 91.961 70.732 49.225 55.965 17.911 19.7 0 0 46 56 19 19 0 0 1 2 1 1 0 0 3297.2 21959 2322 21131 50928 59031;59032 59031 2 VTVLDTNDNAPK Unmodified 1285.6514 0.65139506 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 5.67 0.471 1 2 54.647 54.647 2;3 4.9172E-06 17582 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.46 78.571 89.448 113.33 103.97 114.68 81.632 166.1 84 111 102 112 84 158 2 2 2 3 2 3 13903 21960 1018;2532 21132 50929;50930;50931 59033;59034;59035 59035 3 VTVLGHVQR Unmodified 1007.5876 0.58761301 1568;1357 P47857;P12382 Pfkm;Pfkl ATP-dependent 6-phosphofructokinase, muscle type;ATP-dependent 6-phosphofructokinase, liver type no no 0 0 0 0 6.67 4.03 1 1 1 40.384 40.384 3 0.00016117 11376 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 114.89 50.63 560.79 494.42 368.17 558.29 531.03 392.1 527 506 374 540 542 376 3 3 2 3 2 2 76304 21961 1568;1357 21133 50932;50933;50934 59036;59037;59038 59036 3 VTVLTLQDK Unmodified 1015.5914 0.59136099 3375 Q9Z1F9 Uba2 SUMO-activating enzyme subunit 2 yes yes 0 0 0 0 8.5 0.5 1 1 64.071 64.071 2 0.0006489 20529 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 120.12 77.52 0 29.792 0 111.74 0 0 0 28 0 107 0 0 0 1 0 2 0 0 8654.7 21962 3375 21134 50935;50936 59039;59040 59039 2 VTVNTAYGSNGVSVLR Deamidation (N) 1636.842 0.84204938 1841 P97300 Nptn Neuroplastin yes yes 0 1 0 0 6.5 0.5 1 1 63.16 63.16 2 0.0010846 20741 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.927 46.171 0 0 14.749 8.958 0 14.924 0 0 14 9 0 14 0 0 1 1 0 1 6398.1 21963 1841 21135 50937;50938 59041;59042 59042 747;748 2 VTVNTAYGSNGVSVLR 2 Deamidation (N) 1637.8261 0.82606496 1841 P97300 Nptn Neuroplastin yes yes 0 2 0 0 8 0 1 63.015 63.015 2 0.00070709 19995 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.035 11.681 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21964 1841 21135 50939 59043 59043 747;748 1 VTVNYPPTITESK Unmodified 1447.7559 0.75586013 13 Q3TYE5;A0A087WP80;Q8BLK3 Lsamp Limbic system-associated membrane protein yes no 0 0 0 0 6.5 0.5 1 1 60.969 60.969 3 1.2201E-07 19969 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 112.15 67.389 290.68 182.49 290.85 213.91 360.5 394.79 273 190 283 213 367 380 4 3 4 4 5 5 16938 21965 13 21136 50940;50941 59044;59045;59046;59047;59048 59047 5 VTVNYPPYISEAK Unmodified 1479.7609 0.76094551 765;987 D3Z396;Q8BG33;Q99PJ0;F6Z2M6;F6RQ26 Ntm Neurotrimin no no 0 0 0 0 8 0.816 1 1 1 66.237 66.237 2;3 1.2661E-10 22203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 118.87 78.434 118.54 53.597 49.622 130.39 166.89 133.82 111 56 46 121 167 130 2 1 1 2 2 3 15680 21966 765;987 21137 50942;50943;50944 59049;59050;59051 59049 3 VTVPEAQAK Unmodified 941.5182 0.51819605 1902 Q14BI1;B1AXF3;Q8BUN9;B1AXF2 Slc24a2 yes no 0 0 0 0 6.5 0.5 1 1 47.41 47.41 2;3 0.0021375 14094 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 74.269 40.718 39.035 45.078 73.806 75.447 55.11 0 37 46 74 74 56 0 1 1 1 1 1 0 5565.6 21967 1902 21138 50945;50946 59052;59053 59052 2 VTVTNPDTGR Unmodified 1058.5356 0.53563702 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7.75 3.11 1 1 1 1 38.581 38.581 2 2.4231E-08 10038 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 144.47 100.36 355.32 372.91 445.69 231.2 327.74 461.82 335 380 434 222 329 442 2 3 2 3 2 4 67086 21968 1362 21139 50947;50948;50949;50950 59054;59055;59056;59057 59055 4 VTWAPPPSIELTNLLVR Unmodified 1905.0724 0.072383667 28 B7ZNJ1;A0A087WS56;B9EHT6;A0A087WSN6;Q3UHL6;A0A087WR50;P11276 Fn1 Fibronectin;Anastellin yes no 0 0 0 0 10 0 1 92.453 92.453 3 0.0053332 30043 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 41.86 11.727 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 1110.6 21969 28 21140 50951 59058 59058 1 VTWDSSFCAVNPR Unmodified 1537.6984 0.69836203 3336 Q9WUM4;E9PX03;E9PZJ0;E9PVJ1 Coro1c Coronin-1C;Coronin yes no 0 0 0 0 8 0 1 65.371 65.371 3 9.7825E-05 21106 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.731 71.774 0 47.816 67.461 0 48.116 0 0 46 65 0 46 0 0 1 1 0 1 0 7690.9 21970 3336 21141 50952 59059 59059 1 VTWDSTFCAVNPK Deamidation (N) 1524.6919 0.69187967 3335 Q9WUM3;D3YUG6 Coro1b Coronin-1B;Coronin yes no 0 1 0 0 7 0 1 70.356 70.356 3 0.0071555 24143 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.207 32.069 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21971 3335 21142 50953 59060 59060 1131 1 VTWDSTFCAVNPK Unmodified 1523.7079 0.70786408 3335 Q9WUM3;D3YUG6 Coro1b Coronin-1B;Coronin yes no 0 0 0 0 8 0 1 70.278 70.278 3 0.0012168 23487 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.161 38.289 84.297 93.268 0 0 0 123.66 79 93 0 0 0 116 1 1 0 0 0 1 9116.4 21972 3335 21142 50954 59061 59061 1 VTWSSIPK Unmodified 916.50182 0.5018177 1803 P70232;A0A0N4SUM4 Chl1 Neural cell adhesion molecule L1-like protein;Processed neural cell adhesion molecule L1-like protein yes no 0 0 0 0 10 0 1 61.601 61.601 2 0.00050302 16743 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.4 25.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21973 1803 21143 50955 59062 59062 1 VTYLPVQK Unmodified 946.54877 0.54876789 3377 Q9Z1J3 Nfs1 Cysteine desulfurase, mitochondrial yes yes 0 0 0 0 10 0.816 1 1 1 59.153 59.153 2 0.012195 15627 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.37 51.578 142.76 36.385 141.77 31.451 100.07 150.65 134 37 135 32 102 144 2 1 2 1 2 2 15950 21974 3377 21144 50956;50957;50958 59063;59064;59065 59064 3 VTYMEEER Unmodified 1055.4594 0.45936054 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 4.5 0.5 1 1 44.374 44.374 2 0.0066967 13237 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.657 58.722 0 86.631 100.57 103.26 118.51 65.908 0 83 102 102 120 65 0 1 1 1 1 1 10581 21975 1957 21145 50959;50960 59066;59067 59067 2 VTYSEENR Unmodified 996.45124 0.45123869 2717 Q8VHL0 Slc14a1 Urea transporter 1 yes yes 0 0 0 0 4 0 1 33.276 33.276 2 0.014947 8345 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.498 61.478 39.516 36.703 0 0 0 0 37 37 0 0 0 0 1 1 0 0 0 0 4775.7 21976 2717 21146 50961 59068 59068 1 VTYVDFLAYDILDQYR Unmodified 1992.9833 0.98329389 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 no no 0 0 0 0 9.2 2.04 1 1 2 1 102.18 102.18 2;3 4.7146E-33 41384 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 147.1 121.12 65.265 35.696 45.348 90.199 73.035 65.378 61 36 46 85 74 62 3 3 3 5 4 4 80935 21977 1347 21147 50962;50963;50964;50965;50966 59069;59070;59071;59072;59073;59074;59075;59076 59075 8 VVAEEAWENHLK Unmodified 1423.7096 0.70957864 2673 Q8R5H1 Usp15 Ubiquitin carboxyl-terminal hydrolase 15 yes yes 0 0 0 0 5 0 1 58.031 58.031 3 0.029817 19859 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.475 17.942 29.856 37.355 0 29.528 57.22 0 28 37 0 28 56 0 1 1 0 1 1 0 2140.5 21978 2673 21148 50967 59077 59077 1 VVAEPVELAQEFR Unmodified 1485.7827 0.78274359 3152 Q9DCT2 Ndufs3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 73.479 73.479 2;3 2.139E-05 26984 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.03 77.94 119.27 70.212 92.426 76.013 74.508 165.05 112 75 93 74 75 158 3 3 3 2 3 5 63603 21979 3152 21149 50968;50969;50970;50971 59078;59079;59080;59081;59082 59080 5 VVAEVYDQER Unmodified 1206.5881 0.58806652 1968 Q3UEB3 Puf60 Poly(U)-binding-splicing factor PUF60 yes yes 0 0 0 0 4 0 1 50.97 50.97 2 0.019257 16768 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 59.908 32.654 29.904 27.776 0 50.278 0 29.848 28 28 0 46 0 28 1 1 0 1 0 1 2604.3 21980 1968 21150 50972 59083 59083 1 VVAFSPVTELK Unmodified 1188.6754 0.67542497 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 0 8.5 0.5 1 1 72.899 72.899 2;3 7.0596E-13 24665 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 145.89 60.823 138.89 119.38 0 110.97 27.454 0 130 121 0 102 28 0 2 2 0 2 1 0 17082 21981 1357 21151 50973;50974 59084;59085 59084 2 VVAFSPVTELKK Unmodified 1316.7704 0.77038799 1357 P12382 Pfkl ATP-dependent 6-phosphofructokinase, liver type yes yes 0 0 0 1 11 1.41 1 1 1 1 1 66.089 66.089 3 1.424E-05 18734 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.105 64.215 284.99 551.47 964.55 895.11 786.27 479.7 269 541 947 861 774 450 2 3 4 3 4 1 121280 21982 1357 21152 50975;50976;50977;50978;50979 59086;59087;59088;59089;59090 59087 5 VVAGVAAALAHK Unmodified 1105.6608 0.66077796 562 A8DUK4 Hbbt1 yes yes 0 0 0 0 5.23 5.37 8 1 3 1 67.671 67.671 2;3 9.8069E-73 15277 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 222.55 183.53 3287.6 3115.1 2791.6 3197.5 3705.3 3273.1 3093 3161 2865 3124 3774 3169 20 18 18 20 20 22 4069300 21983 562 21153 50980;50981;50982;50983;50984;50985;50986;50987;50988;50989;50990;50991;50992 59091;59092;59093;59094;59095;59096;59097;59098;59099;59100;59101;59102;59103;59104;59105;59106;59107;59108;59109;59110;59111;59112;59113;59114;59115;59116;59117;59118;59119 59117 29 VVAGVAAALAHKYH Unmodified 1405.783 0.78301836 562 A8DUK4 Hbbt1 yes yes 0 0 0 1 4.67 5.19 2 1 69.986 69.986 4 3.6386E-05 21308 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 102.4 88.437 217.53 234.19 47.948 306.3 241.26 269.47 204 232 46 287 250 259 3 3 1 4 3 3 31157 21984 562 21154 50993;50994;50995 59120;59121;59122;59123 59120 4 VVAIQGVK Unmodified 812.51199 0.51198846 161 A0A338P764;A0A0R4J063;O89096;P61329;P70379 Fgf14;Fgf12 Fibroblast growth factor;Fibroblast growth factor 12;Fibroblast growth factor 14 yes no 0 0 0 0 9.33 0.471 2 1 55.182 55.182 2;3 0.0067556 13909 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.43 48.448 275.83 206.36 173.98 322.19 217.36 366.9 259 206 182 308 224 350 3 1 1 3 1 3 34325 21985 161 21155 50996;50997;50998 59124;59125;59126 59126 3 VVAIYDYTK Unmodified 1070.5648 0.56481189 634;18 A0A087WRS3;A0A087WPP8;Q6AXH6;Q6AXD2;P62484;A0A087WNT3;A0A087WP64;A0A087WPE6;A0A087WNU9;B7ZCU4;B7ZCU3;B7ZCU0;J3QNK8;Q8CBW3;B7ZCU2;B7ZCU5 Abi2;Abi1 Abl interactor 2;Abl interactor 1 no no 0 0 0 0 8.5 1.12 1 1 1 1 65.533 65.533 2 4.7042E-12 21186 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.1 100.54 227.4 36.052 162.95 220.7 185.81 222.82 213 37 158 214 190 214 2 1 1 2 1 2 23524 21986 18;634 21156 50999;51000;51001;51002 59127;59128;59129;59130 59128 4 VVANLAHPPAE Unmodified 1116.5928 0.59275797 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 7 0 1 51.902 51.902 2 0.051275 15498 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.04 20.702 39.34 26.5 38.246 0 29.288 0 37 28 37 0 28 0 1 1 1 0 1 0 2882.1 21987 3261 21157 51003 59131 59131 1 VVAPFMSNIPLLLYPQDHPR Unmodified 2306.2245 0.22454399 859 E9PZ00;Q8BFQ1;K3W4L3;J3QPG5;Q61207 Psap Prosaposin yes no 0 0 0 0 12 0 1 88.957 88.957 3 3.4739E-07 25348 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.449 45.352 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 2582.5 21988 859 21158 51004 59132 59132 1 VVATNTLGTGEPSIPSNR Unmodified 1811.9377 0.93774068 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 6.5 0.5 1 1 56.778 56.778 3 4.0961E-35 17671 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 144.55 129.76 0 137.39 55.353 74.589 159.18 46.937 0 130 56 74 157 46 0 2 1 2 2 1 43193 21989 1362 21159 51005;51006 59133;59134 59134 2 VVCAVATALR Unmodified 1058.5906 0.59064948 636 B7ZNF6;E9QKH8;O35927 Ctnnd2 Catenin delta-2 yes no 0 0 0 0 10.5 0.5 1 1 62.494 62.494 2 0.0018719 17098 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.37 39.946 196.85 100.05 193.78 0 0 157.77 185 102 185 0 0 148 2 1 1 0 0 2 70095 21990 636 21160 51007;51008 59135;59136 59135 2 VVCDENGSK Deamidation (N) 1007.423 0.42297503 1484;549 P29341;Q9D4E6;Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9;V9GXG3 Pabpc1;Pabpc6;Pabpc4 Polyadenylate-binding protein 1;Polyadenylate-binding protein no no 0 1 0 0 4 0 1 40.78 40.78 2 0.054877 11889 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.614 46.476 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21991 1484;549 21161 51009 59137 59137 143 1 VVDALGNAIDGK Deamidation (N) 1171.6085 0.60846762 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 1 0 0 7.38 3.35 1 2 2 1 2 68.815 68.815 2;3 1.028E-16 22858 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 147.71 92.157 89.723 75.505 142.92 62.723 259.13 259.11 84 74 139 65 259 250 2 2 3 2 4 4 33809 21992 1881 21162 51010;51011;51012;51013;51014;51015;51016;51017 59138;59139;59140;59141;59142;59143;59144;59145 59141 771 8 VVDALGNAIDGK Unmodified 1170.6245 0.62445203 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 7 2.26 3 3 2 1 1 1 68.436 68.436 2;3 5.7334E-73 24165 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 223.71 157.41 930.79 742.42 1020.7 591.79 1206.1 938.22 875 764 987 593 1207 910 7 7 9 9 9 7 626080 21993 1881 21162 51018;51019;51020;51021;51022;51023;51024;51025;51026;51027;51028 59146;59147;59148;59149;59150;59151;59152;59153;59154;59155;59156;59157;59158 59150 13 VVDDELATR Unmodified 1016.5138 0.51383895 2423 Q8BKZ9 Pdhx Pyruvate dehydrogenase protein X component, mitochondrial yes yes 0 0 0 0 3 0.816 1 1 1 47.721 47.721 2 1.433E-05 15529 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 150.17 101.08 216.26 230.08 67.373 172.69 36.688 58.649 203 231 65 158 37 56 2 2 1 1 1 1 56306 21994 2423 21163 51029;51030;51031 59159;59160;59161 59160 3 VVDDTACPLLR Unmodified 1257.6387 0.63872189 312 A0A1L1SVG6;Q8BY89 Slc44a2 Choline transporter-like protein 2 yes no 0 0 0 0 5 0 1 59.857 59.857 2 0.027848 20701 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.927 32.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21995 312 21164 51032 59162 59162 1 VVDDWANDGWGLK Unmodified 1473.6888 0.6888432 1523 P35564 Canx Calnexin yes yes 0 0 0 0 7 0 1 78.836 78.836 3 0.040692 27999 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 36.77 14.572 39.564 27.124 0 0 0 0 37 28 0 0 0 0 1 1 0 0 0 0 3044 21996 1523 21165 51033 59163 59163 1 VVDEYSLNSGK Deamidation (N) 1210.5717 0.57174776 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 1 0 0 4.5 0.5 1 1 58.027 58.027 3 0.0042677 19854 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 62.408 39.668 29.904 56.765 48.033 40.441 0 39.442 28 56 46 37 0 37 1 2 1 1 0 1 6801.3 21997 1055 21166 51034;51035 59164;59165 59165 280 2 VVDEYSLNSGK Unmodified 1209.5877 0.58773217 1055 G3UVV4;P17710 Hk1 Hexokinase;Hexokinase-1 yes no 0 0 0 0 7.75 3.11 1 1 1 1 55.698 55.698 2;3 2.2935E-10 18736 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 141.1 106.92 276.43 213.41 295.26 242.73 222.11 184.79 260 222 296 242 222 176 3 3 4 4 2 3 103610 21998 1055 21166 51036;51037;51038;51039 59166;59167;59168;59169 59169 4 VVDGAVGAQWLAEFK Unmodified 1588.8249 0.82494275 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 0 9.4 2.06 1 1 1 1 1 86.257 86.257 3 7.4402E-08 30111 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.4 93.557 50.193 87.985 269.09 94.009 169.9 157.54 47 84 258 94 166 149 2 2 7 3 5 4 39840 21999 2433 21167 51040;51041;51042;51043;51044 59170;59171;59172;59173;59174;59175;59176;59177;59178 59176 9 VVDGAVGAQWLAEFKK Unmodified 1716.9199 0.91990577 2433 Q8BMF4 Dlat Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial yes yes 0 0 0 1 9 0 2 79.035 79.035 3;4 5.7697E-05 26878 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.41 52.494 119 64.084 143.88 46.457 0 167.36 112 65 139 46 0 157 2 1 2 1 0 2 8512.2 22000 2433 21168 51045;51046 59179;59180 59179 2 VVDLLAPYAK Unmodified 1087.6277 0.6277465 1642 P56480 Atp5b ATP synthase subunit beta, mitochondrial yes yes 0 0 0 0 9.6 3.29 1 1 2 2 1 1 2 77.938 77.938 2;3 2.1109E-08 23869 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 145.92 92.748 1997.9 1452.3 651.98 1002.4 1929.1 1089.4 1871 1471 635 965 1912 1049 8 7 6 8 9 6 961000 22001 1642 21169 51047;51048;51049;51050;51051;51052;51053;51054;51055;51056 59181;59182;59183;59184;59185;59186;59187;59188;59189;59190;59191;59192;59193 59186 13 VVDLLATDADIVSR Unmodified 1485.8039 0.80387296 1144 J3QN31;P28650 Adssl1 Adenylosuccinate synthetase isozyme 1 yes no 0 0 0 0 6 0 1 80.67 80.67 3 0.00076879 29768 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 63.037 46.261 9.477 0 30.248 0 0 0 9 0 28 0 0 0 1 0 1 0 0 0 2623.6 22002 1144 21170 51057 59194 59194 1 VVDLLVIK Unmodified 897.5899 0.58990443 2949 Q9CQZ5 Ndufa6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 yes yes 0 0 0 0 10.8 1.48 1 1 1 1 80.549 80.549 2 0.0019795 25276 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 130.34 51.842 415.02 438.07 217 223.2 302.84 469.18 389 436 214 213 305 445 4 5 3 2 2 5 91728 22003 2949 21171 51058;51059;51060;51061 59195;59196;59197;59198;59199;59200 59197 6 VVDLMAYMASK Unmodified 1226.6039 0.60391628 1395;3448;3454 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R1W1;V9GX06 Gapdh;Gm3839;Gm11214 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 9.88 3.62 1 1 2 1 1 2 86.273 86.273 2;3 6.6825E-20 33758 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 170.72 125.55 282.78 367.36 635.16 118.02 609.51 465.12 265 357 605 112 597 448 5 8 8 3 4 4 677530 22004 1395;3448;3454 21172 51062;51063;51064;51065;51066;51067;51068;51069 59201;59202;59203;59204;59205;59206;59207;59208;59209;59210;59211;59212 59211 12 VVDLMAYMASK Oxidation (M) 1242.5988 0.59883091 1395;3448;3454 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R1W1;V9GX06 Gapdh;Gm3839;Gm11214 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 0 10.1 0.639 1 4 2 78.733 78.733 3 0.0020393 26764 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.01 47.759 149.19 114.02 173.53 161.76 129.34 107.46 140 112 167 157 130 102 4 4 4 4 4 3 17534 22005 1395;3448;3454 21172 51070;51071;51072;51073;51074;51075;51076 59213;59214;59215;59216;59217;59218;59219;59220 59220 90;91 8 VVDLMAYMASKE Unmodified 1355.6465 0.64650938 1395;3448;3454 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R1W1;V9GX06 Gapdh;Gm3839;Gm11214 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 1 10.6 1.8 1 2 1 1 1 2 87.52 87.52 2;3 2.3492E-17 30745 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 149.23 95.088 563.8 127.01 101.04 71.648 193.15 122.29 543 139 96 66 189 116 7 4 2 2 4 4 472970 22006 1395;3448;3454 21173 51077;51078;51079;51080;51081;51082;51083;51084 59221;59222;59223;59224;59225;59226;59227;59228;59229;59230 59222 10 VVDPLAFADVFVALGPQHR Unmodified 2050.1 0.099995401 2329 Q80WM4 Hapln4 Hyaluronan and proteoglycan link protein 4 yes yes 0 0 0 0 10 0 1 96.65 96.65 3 2.1754E-05 31610 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 60.541 53.483 0 0 0 0 18.867 29.31 0 0 0 0 19 28 0 0 0 0 1 1 1232.2 22007 2329 21174 51085 59231 59231 1 VVDPTHK Unmodified 794.42865 0.42865276 1871;1434;43 A0A0R4J0X5;A0A0A0MQA3;P07758;Q00898;P22599;Q00897 Serpina1a;Serpina1e;Serpina1b;Serpina1d Alpha-1-antitrypsin 1-1;Alpha-1-antitrypsin 1-5;Alpha-1-antitrypsin 1-2;Alpha-1-antitrypsin 1-4 no no 0 0 0 0 13 0 1 37.925 37.925 3 0.0063853 10436 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.244 49.144 0 125.45 133.13 0 0 127.92 0 120 130 0 0 120 0 1 1 0 0 1 7853.3 22008 43;1434;1871 21175 51086 59232 59232 1 VVDQAQR Unmodified 814.42972 0.42971539 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 13 0 1 29.123 29.123 2 0.02936 6202 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 86.794 52.791 78.804 53.345 55.339 37.143 0 0 74 56 56 37 0 0 1 1 1 1 0 0 4923.8 22009 2170 21176 51087 59233 59233 1 VVDSDRPEGSK Unmodified 1187.5782 0.57823012 3323 Q9WTR5 Cdh13 Cadherin-13 yes yes 0 0 0 1 5 0 1 35.093 35.093 3 8.9398E-06 8816 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.82 74.82 0 28.858 55.889 66.701 53.881 47.498 0 28 56 65 56 46 0 1 1 1 1 1 3876.6 22010 3323 21177 51088 59234 59234 1 VVDSIEDEVQKR Unmodified 1415.7256 0.72562264 839 Q8C0C7;E9PWY9 Farsa Phenylalanine--tRNA ligase alpha subunit yes no 0 0 0 1 4 0 1 57.666 57.666 3 0.0062709 19913 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.196 30.921 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 3565.3 22011 839 21178 51089 59235 59235 1 VVDSLQLTGTKPVATPVDWK Unmodified 2153.1732 0.17321992 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 1 9.83 2.34 1 1 2 2 74.119 74.119 3;4 1.1637E-16 27839 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 117.48 95.467 771.84 658.02 420.93 792.93 566.34 788.51 724 662 429 756 586 750 6 5 4 6 4 6 275790 22012 2194 21179 51090;51091;51092;51093;51094;51095 59236;59237;59238;59239;59240;59241;59242 59241 7 VVDSLYSK Unmodified 909.48075 0.48074791 2369 Q8BG32;G3UYH2;G3UXL5;G3UWW7 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 8 0 1 57.522 57.522 2 0.020869 17458 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.732 47.547 59.103 73.017 103.72 44.096 0 108.73 56 74 102 46 0 102 1 1 1 1 0 1 4946.1 22013 2369 21180 51096 59243 59243 1 VVDVIGTK Unmodified 829.49092 0.49091866 1495 P31324;H3BK84 Prkar2b cAMP-dependent protein kinase type II-beta regulatory subunit yes no 0 0 0 0 7.5 0.5 1 1 59.179 59.179 2 0.034465 18848 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.954 34.854 68.954 179.5 186.29 280.7 117.86 95.775 65 176 194 269 120 93 1 2 2 2 1 1 28420 22014 1495 21181 51097;51098 59244;59245 59244 2 VVDYTTAK Unmodified 895.4651 0.46509784 1742;2065 P62821;Q5SW88;Q5SW87 Rab1A;Rab1 Ras-related protein Rab-1A no no 0 0 0 0 7 0.816 1 1 1 49.672 49.672 2 0.0068498 14368 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 107.01 50.917 198.66 170.69 190.33 138.52 225.67 218.49 187 176 192 141 229 211 1 1 1 1 1 1 16437 22015 1742;2065 21182 51099;51100;51101 59246;59247;59248 59247 3 VVEDIEYLK Unmodified 1106.5859 0.58594126 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 7 3.54 1 1 1 1 72.332 72.332 2;3 3.5352E-05 26469 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 135.79 91.344 197 143.04 132.5 64.032 217.92 18.9 185 149 130 65 213 19 3 3 2 1 4 1 37999 22016 2859 21183 51102;51103;51104;51105 59249;59250;59251;59252 59250 4 VVEEAPSIFLDPETR Unmodified 1700.8621 0.86211612 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 76.189 76.189 2;3 4.8676E-05 28235 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.57 78.064 20.387 19.744 28.261 49.33 18.936 50.102 19 19 28 47 19 47 1 1 1 3 1 2 8168.6 22017 2782 21184 51106;51107 59253;59254;59255;59256 59253 4 VVEEHESVEQSR Unmodified 1426.6688 0.66883604 1031 F8VPZ3 Usp32 Ubiquitin carboxyl-terminal hydrolase yes yes 0 0 0 0 2 0 1 31.98 31.98 3 0.0062754 8013 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.207 28.744 0 20.216 0 9.4714 19.439 0 0 19 0 9 19 0 0 1 0 1 1 0 1527.4 22018 1031 21185 51108 59257 59257 1 VVEEQESR Unmodified 974.46689 0.46688876 1298 P01029 C4b Complement C4-B;Complement C4 beta chain;Complement C4 alpha chain;C4a anaphylatoxin;Complement C4 gamma chain yes yes 0 0 0 0 1 0 1 31.04 31.04 2 0.019852 7286 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.334 57.433 29.856 37.355 0 20.056 37.781 0 28 37 0 19 37 0 1 1 0 1 1 0 4831.3 22019 1298 21186 51109 59258 59258 1 VVEEVGK Unmodified 758.41742 0.41741937 2633 Q8R0Y6 Aldh1l1 Cytosolic 10-formyltetrahydrofolate dehydrogenase yes yes 0 0 0 0 5 0 1 47.267 47.267 2 0.026973 14710 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 89.55 33.003 78.647 52.91 81.994 95.212 82.444 0 74 56 83 93 83 0 1 1 1 1 1 0 8479.3 22020 2633 21187 51110 59259 59259 1 VVEGSFVYK Unmodified 1026.5386 0.53859714 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 0 8.83 2.27 1 1 1 1 1 1 61.109 61.109 2;3 2.0564E-08 19110 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 167.33 112.78 493.19 487.6 318.02 476.13 799.09 370.08 463 485 315 459 789 357 6 6 4 6 6 5 197180 22021 1595 21188 51111;51112;51113;51114;51115;51116 59260;59261;59262;59263;59264;59265;59266;59267 59263 8 VVEHLEK Unmodified 852.47052 0.47051757 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 6 0 1 42.318 42.318 3 0.061686 11705 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.312 12.191 0 98.952 0 80.882 0 0 0 93 0 74 0 0 0 1 0 1 0 0 7188.4 22022 2845 21189 51117 59268 59268 1 VVEILHK Unmodified 836.51199 0.51198846 2381 Q8BGQ1 Vipas39 Spermatogenesis-defective protein 39 homolog yes yes 0 0 0 0 8 0 1 53.993 53.993 3 0.029962 15736 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.103 23.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22023 2381 21190 51118 59269 59269 1 VVELLADIVQNSSLEDSQIEK Unmodified 2328.206 0.20603619 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 0 8.78 2.57 2 2 1 1 1 2 104.67 104.67 3;4 1.8747E-13 36410 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 108.71 93.781 116.94 123.66 246.45 124.87 142.24 146.96 110 126 237 124 142 142 7 9 9 7 6 7 49893 22024 2998 21191 51119;51120;51121;51122;51123;51124;51125;51126;51127 59270;59271;59272;59273;59274;59275;59276;59277;59278;59279;59280;59281;59282;59283 59276 14 VVELLADIVQNSSLEDSQIEKER Unmodified 2613.3497 0.34974032 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 0 0 1 9.25 2.28 1 1 1 1 95.63 95.63 4 3.8611E-10 35356 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.088 59.24 42.179 44.266 98.905 80.456 67.803 49.036 40 45 94 79 66 46 3 3 3 4 3 2 20728 22025 2998 21192 51128;51129;51130;51131 59284;59285;59286;59287;59288;59289;59290 59285 7 VVEPIRPK Unmodified 936.57565 0.57565135 2240 Q6PDY2 Ado 2-aminoethanethiol dioxygenase yes yes 0 0 0 1 8 0 1 44.349 44.349 3 0.049185 11156 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.59 31.651 98.743 90.64 98.916 123.74 81.134 0 93 93 102 120 83 0 1 1 1 1 1 0 7629.8 22026 2240 21193 51132 59291 59291 1 VVEQMCVTQYQK Unmodified 1511.7112 0.7112349 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 8 0 1 58.009 58.009 3 0.001914 17663 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.106 40.853 0 0 48.129 36.876 37.008 0 0 0 46 37 37 0 0 0 1 1 1 0 4878.7 22027 1307 21194 51133 59292 59292 1 VVETEDAYK Unmodified 1052.5026 0.50260556 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 4 0 1 49.316 49.316 2 0.0021425 15925 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.331 57.309 49.011 0 58.26 46.806 0 39.442 46 0 56 46 0 37 1 0 1 1 0 1 17915 22028 2250 21195 51134 59293 59293 1 VVEVGSK Unmodified 716.40685 0.40685468 1609 P52480;A0A1L1SU37;A0A1L1SQV8;A0A1L1SSN6;A0A1L1STV8 Pkm Pyruvate kinase PKM yes no 0 0 0 0 8.6 2.42 1 1 1 1 1 45.952 45.952 2 0.0091591 14109 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.83 38.748 2926.8 2309.8 3069.3 2704.2 2761.3 2746.7 2755 2403 3083 2689 2804 2634 6 6 6 7 5 6 575660 22029 1609 21196 51135;51136;51137;51138;51139 59294;59295;59296;59297;59298;59299;59300 59300 7 VVFEQTK Unmodified 849.45962 0.45961853 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 8.17 2.41 2 1 1 1 1 52.363 52.363 2;3 0.0056661 15781 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.18 72.422 1921.5 1682.8 1838.1 1937.1 2231.8 2399.9 1806 1721 1825 1896 2286 2307 6 7 7 7 7 7 535490 22030 1405 21197 51140;51141;51142;51143;51144;51145 59301;59302;59303;59304;59305;59306;59307;59308 59304 8 VVFGLFGK Unmodified 865.50617 0.5061748 1444 P24369 Ppib Peptidyl-prolyl cis-trans isomerase B yes yes 0 0 0 0 5 5.66 2 1 82.794 82.794 2 0.0010837 28848 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 145.87 81.004 365.34 534.99 328.96 429.24 455.35 262.87 343 528 334 408 456 251 7 11 7 7 8 7 43627 22031 1444 21198 51146;51147;51148 59309;59310;59311;59312;59313;59314;59315;59316;59317;59318;59319;59320 59310 12 VVFIFGPDK Unmodified 1020.5644 0.56441796 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 0 11.2 1.09 1 2 1 79.089 79.089 2;3 0.00051474 24284 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 123.92 78.199 315.44 331.78 471.98 485.33 129.49 549.56 296 333 464 472 139 519 3 4 3 4 1 4 186740 22032 2194 21199 51149;51150;51151;51152 59321;59322;59323;59324;59325;59326 59324 6 VVFIFGPDKK Unmodified 1148.6594 0.65938097 2194 Q6GT24;D3Z0Y2;O08709 Prdx6 Peroxiredoxin-6 yes no 0 0 0 1 10.2 4.14 1 1 3 1 69.835 69.835 2;3;4 7.0254E-05 24022 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 101.65 79.318 1030.5 2087.7 1184.6 2225 1010.5 1034 970 2046 1179 2095 1017 987 5 7 5 6 5 4 348510 22033 2194 21200 51153;51154;51155;51156;51157;51158 59327;59328;59329;59330;59331;59332;59333 59327 7 VVFLGNMK Unmodified 906.49971 0.49970921 2393 Q8BH44;G3UW48 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 11.5 0.5 1 1 68.389 68.389 2 0.0066853 17210 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.74 58.433 59.76 65.13 0 120 64.649 97.293 56 65 0 120 65 93 1 1 0 1 1 1 27086 22034 2393 21201 51159;51160 59334;59335 59335 2 VVFQAEEER Unmodified 1105.5404 0.54038805 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 5 0 1 49.768 49.768 2 0.0013441 15893 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 103.19 66.351 0 78.736 97.721 134.56 90.447 185.04 0 74 93 130 93 176 0 1 1 2 1 2 8334.4 22035 728 21202 51161 59336;59337 59337 2 VVFSTGSYPR Unmodified 1111.5662 0.56620887 1774 P63137 Gabrb2 Gamma-aminobutyric acid receptor subunit beta-2 yes yes 0 0 0 0 10 0 1 55.323 55.323 2 0.0050098 13882 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 76.605 48.386 29.75 27.347 26.287 49.804 0 0 28 28 28 47 0 0 1 1 1 1 0 0 2314.6 22036 1774 21203 51162 59338 59338 1 VVGAFPMAK Unmodified 918.49971 0.49970921 2034 Q505D7;A0A0U1RPB1 Opa3 Optic atrophy 3 protein homolog yes no 0 0 0 0 10 0 1 64.839 64.839 2 0.0019774 18107 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.068 65.838 0 58.467 66.822 0 67.99 0 0 56 65 0 65 0 0 1 1 0 1 0 3279.9 22037 2034 21204 51163 59339 59339 1 VVGALVDQGIFEELTR Unmodified 1744.9359 0.93594977 2064 Q5SVR0 Tbc1d9b TBC1 domain family member 9B yes yes 0 0 0 0 7 0 1 91.068 91.068 3 0.00075873 33746 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.254 39.117 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 585.63 22038 2064 21205 51164 59340 59340 1 VVGAMQLYSVDR Unmodified 1336.6809 0.68092105 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.8 2.32 1 1 1 1 1 65.151 65.151 2 1.7224E-32 20322 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 184.9 148.06 178 136.51 84.484 188.19 316.99 142.85 167 139 83 176 316 139 3 2 1 3 4 2 117160 22039 2185 21206 51165;51166;51167;51168;51169 59341;59342;59343;59344;59345 59343 5 VVGAMQLYSVDRK Unmodified 1464.7759 0.77588407 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 10.8 1.48 1 1 1 1 59.457 59.457 3 3.7096E-11 17711 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.56 87.38 565.81 353.87 544.93 464.03 374.74 705.66 532 377 540 448 383 672 2 2 2 2 1 3 73757 22040 2185 21207 51170;51171;51172;51173 59346;59347;59348;59349 59346 4 VVGAQSLK Unmodified 800.4756 0.47560295 3142 Q9DCD0 Pgd 6-phosphogluconate dehydrogenase, decarboxylating yes yes 0 0 0 0 8.5 0.5 1 1 48.984 48.984 2 0.0078284 12601 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 104.44 19.694 236.6 129.27 160.08 261.96 209.04 172.06 222 139 167 252 217 167 1 1 1 1 1 1 13570 22041 3142 21208 51174;51175 59350;59351 59351 2 VVGELAQQMIGYNLATK Unmodified 1833.9659 0.96586969 3396 Q9Z2I8;A0A0N4SWD1 Suclg2 Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial yes no 0 0 0 0 10 0 1 85.958 85.958 3 0.00026462 27580 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.784 41.84 0 0 50.062 17.783 0 0 0 0 47 19 0 0 0 0 1 1 0 0 2993.7 22042 3396 21209 51176 59352 59352 1 VVGFHVLGPNAGEVTQGFAAALK Unmodified 2281.2219 0.22190145 3253 Q9JMH6 Txnrd1 Thioredoxin reductase 1, cytoplasmic yes yes 0 0 0 0 9.5 0.5 1 1 80.082 80.082 4 6.5313E-12 25044 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.742 42.358 148.81 0 57.278 67.631 45.451 77.587 139 0 56 65 46 74 2 0 1 1 1 1 17333 22043 3253 21210 51177;51178 59353;59354 59354 2 VVGNPFDSR Unmodified 989.49304 0.49304393 1562 P47738;A0A0G2JEU1 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 55.843 55.843 2 0.0011101 17233 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.94 70.686 148.47 62.173 61.449 144.3 210.92 152.82 139 65 65 139 213 149 2 1 1 2 2 2 30066 22044 1562 21211 51179;51180 59355;59356 59355 2 VVGSEFVQK Unmodified 991.53385 0.53384611 237 A0A140LIZ5;P54775 Psmc4 26S protease regulatory subunit 6B yes no 0 0 0 0 7.5 0.5 1 1 57.183 57.183 2 0.00070628 17247 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 118.5 61.032 119.16 143.3 49.084 139.16 66.188 131.36 112 143 56 130 65 125 2 2 1 1 1 2 10071 22045 237 21212 51181;51182 59357;59358 59358 2 VVGVLLGSWQK Unmodified 1184.6917 0.69174374 1459 P26516 Psmd7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 0 1 0 1 82.692 82.692 3 9.3762E-06 29057 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 99.815 63.856 39.52 27.001 7.5318 8.6863 37.314 28.783 37 28 9 9 37 28 1 1 1 1 1 1 7723.3 22046 1459 21213 51183 59359 59359 1 VVHAFDMEDLGDK Unmodified 1474.6762 0.67622961 2760 Q91WS0 Cisd1 CDGSH iron-sulfur domain-containing protein 1 yes yes 0 0 0 0 5.5 0.5 1 1 65.472 65.472 3 1.8862E-05 23236 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 102.62 83.226 118.47 46.899 107.4 50.278 64.978 136.73 111 47 102 46 65 130 2 1 2 1 1 2 23687 22047 2760 21214 51184;51185 59360;59361;59362 59360 3 VVHFLGR Unmodified 826.48136 0.48135703 1150 K3W4S6;V9GX26;Q9R062 Gyg;Gyg1 Glycogenin-1 yes no 0 0 0 0 10.5 0.5 1 1 48.131 48.131 3 0.0045544 10727 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.28 64.066 0 88.312 0 80.391 26.124 107.99 0 83 0 74 28 102 0 1 0 2 1 2 20643 22048 1150 21215 51186;51187 59363;59364 59364 2 VVHIMDFQR Unmodified 1143.5859 0.58589846 2602 Q8K310;A0A087WSP7;A0A087WQZ1;A0A087WQ54 Matr3;Gm28285 Matrin-3 yes no 0 0 0 0 8 0 1 55.255 55.255 3 0.0022459 16387 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 73.573 55.305 59.684 24.986 46.733 27.819 0 59.696 56 28 46 28 0 56 1 1 1 1 0 1 11237 22049 2602 21216 51188 59365 59365 1 VVHLLNDQHLGVVTAATSLITTLAQK Deamidation (N) 2742.528 0.52797946 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 1 0 0 12 0 1 99.559 99.559 5 9.4153E-12 28398 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.364 53.773 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 600.01 22050 1401 21217 51189 59366 59366 499 1 VVHSYEELEENYTR Unmodified 1766.8111 0.81114318 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 6.25 3.96 1 1 1 1 54.953 54.953 3 2.4617E-06 18809 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 106.55 90.914 69.301 94.866 28.517 89.038 205.03 124.24 65 94 28 84 204 121 2 3 1 2 4 3 24139 22051 974 21218 51190;51191;51192;51193 59367;59368;59369;59370 59368 4 VVHVNGFGK Deamidation (N) 956.50797 0.50796571 1164 O08749 Dld Dihydrolipoyl dehydrogenase, mitochondrial yes yes 0 1 0 0 9.17 2.79 1 1 2 2 50.778 50.778 3 0.0020853 16323 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.657 65.881 747.84 227.87 459.73 415.67 634.08 380.77 700 235 452 404 629 367 6 2 4 4 4 4 144450 22052 1164 21219 51194;51195;51196;51197;51198;51199 59371;59372;59373;59374;59375;59376;59377 59376 318 7 VVIEDDRIDDVLK Unmodified 1527.8144 0.81443765 2254 Q6QWF9;Q78WH7 Camk2n1;Camk2n2 Calcium/calmodulin-dependent protein kinase II inhibitor 1;Calcium/calmodulin-dependent protein kinase II inhibitor 2 yes no 0 0 0 1 4 0 1 67.394 67.394 3 0.0057064 24261 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 56.599 27.793 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 0 3679.6 22053 2254 21220 51200 59378 59378 1 VVIFQQEQENK Unmodified 1360.6987 0.69867961 2211 Q6P1F6;Q9CWU3 Ppp2r2a Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B yes no 0 0 0 0 7.5 0.5 1 1 59.84 59.84 3 6.5375E-05 19216 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 95.483 60.951 117.79 186.71 130.98 96.334 176.7 86.623 111 185 130 92 176 83 2 3 2 2 3 1 19178 22054 2211 21221 51201;51202 59379;59380;59381 59380 3 VVIMGAGKPAAVVLQTK Unmodified 1680.996 0.9960476 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 1 6.5 5.5 1 1 68.937 68.937 3;4 1.8444E-05 23606 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 92.977 82.122 0 92.054 30.741 32.051 0 88.478 0 87 31 31 0 83 0 2 1 1 0 2 14295 22055 2408 21222 51203;51204 59382;59383 59382 2 VVINGQEVK Deamidation (N) 985.54441 0.5444108 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 1 0 0 5.5 0.5 1 1 54.088 54.088 2 0.024348 17300 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.653 32.09 59.625 0 77.788 44.426 64.658 37.597 56 0 74 46 65 37 1 0 1 1 1 1 4027.8 22056 1446 21223 51205;51206 59384;59385 59385 532 2 VVINISGLR Unmodified 969.59712 0.59711507 1775;1392 P63141;P16388 Kcna2;Kcna1 Potassium voltage-gated channel subfamily A member 2;Potassium voltage-gated channel subfamily A member 1 no no 0 0 0 0 10 0 1 65.899 65.899 2 0.000892 18540 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.11 75.66 88.22 71.443 80.404 104.85 98.238 105.93 83 74 83 102 102 102 1 1 1 1 1 1 19371 22057 1775;1392 21224 51207 59386 59386 1 VVINVPIFK Unmodified 1027.643 0.64300263 1855 P97494 Gclc Glutamate--cysteine ligase catalytic subunit yes yes 0 0 0 0 12 0.816 1 1 1 79.504 79.504 2;3 0.0009487 21507 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 109.86 86.791 0 58.63 106.85 0 153.4 136.46 0 56 102 0 153 130 0 1 2 0 2 2 25244 22058 1855 21225 51208;51209;51210 59387;59388;59389 59388 3 VVIVNPETK Unmodified 997.5808 0.5807963 617 B2RQC7;Q3UH60 Dip2b Disco-interacting protein 2 homolog B yes no 0 0 0 0 8 0 1 56.722 56.722 2 0.016708 17076 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.993 27.948 0 48.187 45.254 36.527 64.691 47.19 0 46 46 37 65 46 0 1 1 1 1 1 2206.8 22059 617 21226 51211 59390 59390 1 VVKEPLGFVK Unmodified 1114.675 0.67503104 2149 Q62277;F6VR28 Syp Synaptophysin yes no 0 0 0 1 9.5 0.5 1 1 61.667 61.667 3 0.0014277 18743 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.463 64.142 465.81 592.15 378.76 307.57 844.64 0 439 592 368 288 821 0 2 2 1 1 2 0 78892 22060 2149 21227 51212;51213 59391;59392 59391 2 VVLAGGVAPTLFR Unmodified 1298.7711 0.77105669 2588 Q8K1B8 Fermt3 Fermitin family homolog 3 yes yes 0 0 0 0 12 0 1 75.869 75.869 2 0.00074324 20151 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.243 46.305 49.358 0 0 0 28.291 29.041 46 0 0 0 28 28 1 0 0 0 1 1 1532.1 22061 2588 21228 51214 59393 59393 1 VVLAYEPVWAIGTGK Unmodified 1601.8817 0.88172935 1405 P17751;H7BXC3 Tpi1 Triosephosphate isomerase yes no 0 0 0 0 10 2.94 1 3 3 2 2 2 85.611 85.611 2;3;4 3.8915E-16 27391 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 125.97 91.083 325.44 661.03 184.04 676.38 677.55 788.41 305 644 177 629 686 760 7 8 4 6 6 7 1050500 22062 1405 21229 51215;51216;51217;51218;51219;51220;51221;51222;51223;51224;51225;51226;51227 59394;59395;59396;59397;59398;59399;59400;59401;59402;59403;59404;59405;59406;59407;59408 59399 15 VVLDDKDYFLFR Unmodified 1528.7926 0.79257999 2175 Q64433 Hspe1 10 kDa heat shock protein, mitochondrial yes yes 0 0 0 1 9.17 1.95 1 2 1 1 1 76.598 76.598 2;3 2.2031E-18 25674 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.06 121.15 2095.3 1401.2 2666 2085.9 2958.4 2870.5 1973 1436 2619 2094 3000 2772 6 6 6 7 5 8 301340 22063 2175 21230 51228;51229;51230;51231;51232;51233 59409;59410;59411;59412;59413;59414;59415;59416 59414 8 VVLDSVK Unmodified 758.4538 0.45380487 335 A0A1Y7VJ48;P48428 Tbca Tubulin-specific chaperone A yes no 0 0 0 0 8 0 1 56.08 56.08 2 0.027113 16737 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.065 20.375 176.88 174.51 240.18 134.01 191.65 209.86 167 179 238 139 196 202 1 1 1 1 1 1 17705 22064 335 21231 51234 59417 59417 1 VVLDVGSGTGILSMFAAK Unmodified 1763.9492 0.94915699 2231 Q6PAK3 Prmt8 Protein arginine N-methyltransferase 8 yes yes 0 0 0 0 11 0 1 96.189 96.189 3 0.01526 31318 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.64 25.475 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1633 22065 2231 21232 51235 59418 59418 1 VVLEDGNLLVTPGAGR Unmodified 1608.8835 0.88352026 207 Q3TMU8;A0A0R4J1N0;O35098 Dpysl4 Dihydropyrimidinase-related protein 4 yes no 0 0 0 0 9 2.94 1 1 1 71.548 71.548 3 2.3475E-06 26655 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.652 55.621 88.347 62.083 66.985 81.599 45.17 38.153 83 65 65 83 46 37 2 2 1 2 1 1 27113 22066 207 21233 51236;51237;51238 59419;59420;59421 59421 3 VVLEHEEVR Unmodified 1108.5877 0.58767259 3291 Q9QZE5 Copg1 Coatomer subunit gamma-1 yes yes 0 0 0 0 4 0 1 39.945 39.945 3 0.0012327 11467 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.755 59.853 29.737 27.31 28.508 0 0 39.442 28 28 28 0 0 37 1 1 1 0 0 1 3280.1 22067 3291 21234 51239 59422 59422 1 VVLFLQK Unmodified 845.53747 0.53747492 2069 Q5SYD0 Myo1d Unconventional myosin-Id yes yes 0 0 0 0 1 0 1 74.54 74.54 2 0.027161 25538 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 91.584 59.471 20.207 0 30.194 0 46.807 38.106 19 0 28 0 46 37 1 0 1 0 1 1 2459.3 22068 2069 21235 51240 59423 59423 1 VVLIGDSGVGK Unmodified 1042.6023 0.60226003 1556 P46638;G3UY29;E9Q3P9;F8WGS1;P62492 Rab11b;Rab11a Ras-related protein Rab-11B;Ras-related protein Rab-11A yes no 0 0 0 0 9 0.816 1 1 1 63.768 63.768 2;3 1.8811E-08 20325 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 113.93 22.377 197.13 107.95 140.29 100.32 206.2 105.54 185 111 139 102 205 102 3 2 2 2 3 2 29781 22069 1556 21236 51241;51242;51243 59424;59425;59426 59424 3 VVLIGGKPDR Unmodified 1052.6342 0.63422886 613 B2M1R6;P61979;H3BKD0;H3BLL4;A0A286YDM3;H3BK96;H3BKI8 Hnrnpk Heterogeneous nuclear ribonucleoprotein K yes no 0 0 0 1 9.33 3.94 1 1 1 1 1 1 50.699 50.699 2;3 3.7552E-05 10471 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 108.15 41.389 382.84 613.07 1662.4 646.71 1840.7 523.19 359 603 1554 608 1784 497 3 5 3 5 4 3 241770 22070 613 21237 51244;51245;51246;51247;51248;51249 59427;59428;59429;59430;59431;59432 59431 6 VVLIPYVLPR Unmodified 1167.738 0.73796565 3052 Q9D2R0 Aacs Acetoacetyl-CoA synthetase yes yes 0 0 0 0 1 0 1 82.985 82.985 2 3.5731E-07 29109 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.24 97.67 23.376 0 38.578 30.029 24.559 36.609 22 0 37 30 26 35 1 0 1 1 1 1 7210.6 22071 3052 21238 51250 59433 59433 1 VVLLAEGR Unmodified 855.5178 0.51780212 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 8.5 0.5 1 1 57.011 57.011 2 0.013147 17290 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.754 52.554 285.4 285.14 122.54 173.46 215.22 124.46 268 288 120 167 213 120 3 3 1 2 2 1 78406 22072 2298 21239 51251;51252 59434;59435;59436 59435 3 VVLNSMDVNSK Unmodified 1204.6122 0.61217279 2224 Q6P6I8;E0CYM8 Sirpa yes no 0 0 0 0 7.75 0.829 2 1 1 59.499 59.499 2;3 0.00045044 18338 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.979 41.061 218.52 143.22 0 180.09 187.79 46.99 204 139 0 166 185 46 2 2 0 2 2 1 21969 22073 2224 21240 51253;51254;51255;51256 59437;59438;59439;59440 59439 4 VVLPMELPIR Unmodified 1165.6893 0.68930089 1294 P00405 Mtco2 Cytochrome c oxidase subunit 2 yes yes 0 0 0 0 10.7 1.7 1 1 1 80.025 80.025 2;3 0.00071117 25055 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 80.755 58.762 158.8 76.968 124.99 166.84 266.78 241.31 148 74 121 157 269 232 1 1 2 3 3 2 71226 22074 1294 21241 51257;51258;51259 59441;59442;59443;59444 59443 4 VVLPSLACLR Unmodified 1126.6532 0.65324974 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 11 0 1 73.784 73.784 2 1.7199E-15 21725 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 176.09 142.29 0 135.21 185.78 140.85 0 278.23 0 130 185 139 0 261 0 1 1 1 0 1 50850 22075 3373 21242 51260 59445 59445 1 VVLPTFILEPR Unmodified 1282.7649 0.76490868 198 A0A0R4J150;B9EJ86 Osbpl8 Oxysterol-binding protein yes no 0 0 0 0 10 0 1 85.781 85.781 2 0.0054143 27464 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.654 40.499 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22076 198 21243 51261 59446 59446 1 VVLPYLVPK Unmodified 1026.6478 0.64775366 828 E9PVA8 Gcn1l1 yes yes 0 0 0 0 6 5 1 1 78.032 78.032 2;3 0.0042662 27254 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.486 39.151 79.402 9.0926 28.918 18.686 105.83 0 74 9 28 19 102 0 1 1 1 1 2 0 4081 22077 828 21244 51262;51263 59447;59448 59447 2 VVLSLVSTR Unmodified 972.59678 0.59678072 644 B9EKR1;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 1 0 1 66.49 66.49 2 0.0015451 22367 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 100.84 67.194 0 38.766 36.002 38.295 0 0 0 37 37 37 0 0 0 1 1 1 0 0 4929.1 22078 644 21245 51264 59449 59449 1 VVLSQASK Unmodified 830.48617 0.48616764 2001 Q3UPL0;S4R2A9;S4R1T5 Sec31a Protein transport protein Sec31A yes no 0 0 0 0 9.5 0.5 1 1 47.865 47.865 2 0.0057753 12089 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.82 46.201 49.203 90.314 0 39.373 146.01 81.667 46 88 0 37 144 79 1 2 0 1 2 1 11236 22079 2001 21246 51265;51266 59450;59451 59450 2 VVLVLAGR Unmodified 825.54362 0.54362294 1698 P61358 Rpl27 60S ribosomal protein L27 yes yes 0 0 0 0 6.5 5.5 1 1 64.08 64.08 2 0.0028468 15497 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 126.16 65.034 182.37 90.775 109.68 191.75 208.12 171.02 171 92 111 185 213 166 3 2 2 3 3 3 40904 22080 1698 21247 51267;51268 59452;59453;59454 59454 3 VVLVNNILQNAQER Unmodified 1608.8948 0.89475365 3390 Q9Z266 Snapin SNARE-associated protein Snapin yes yes 0 0 0 0 11 0 1 72.647 72.647 2 9.5834E-05 21305 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 103.31 69.426 14.968 0 9.0237 14.339 22.579 23.874 14 0 9 14 23 23 1 0 1 1 1 1 3774.8 22081 3390 21248 51269 59455 59455 1 VVLVTGAGGGLGR Unmodified 1154.6772 0.6771563 1602 P51660 Hsd17b4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 yes yes 0 0 0 0 7.67 4.78 1 1 1 59.736 59.736 2 1.5351E-10 14055 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.52 61.509 73.573 30.899 71.936 39.936 97.74 86.755 69 32 70 41 97 84 2 1 2 2 2 3 14374 22082 1602 21249 51270;51271;51272 59456;59457;59458 59458 3 VVNAAIATASSAPGESEEPVVPSASR Unmodified 2495.2504 0.25036063 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 5.5 0.5 1 1 65.414 65.414 3 5.0047E-67 23249 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 129.66 118.01 0 20.073 8.5336 0 0 0 0 19 9 0 0 0 0 1 1 0 0 0 6201.3 22083 2186 21250 51273;51274 59459;59460 59459 2 VVNAPIFHVNSDDPEAVMYVCK Unmodified 2503.1876 0.18756613 2074 Z4YJV4;Q60597 Ogdh 2-oxoglutarate dehydrogenase, mitochondrial yes no 0 0 0 0 6.5 0.5 1 1 75.635 75.635 3 0.00020917 26498 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 43.164 35.075 0 0 19.685 19.594 0 20.254 0 0 19 19 0 19 0 0 1 1 0 1 2342.1 22084 2074 21251 51275;51276 59461;59462 59462 2 VVNDDCTHEADVYIESGIIQQVGR Unmodified 2716.2763 0.2762578 3172 Q9EQF6;Q3SYJ1 Dpysl5 Dihydropyrimidinase-related protein 5 yes no 0 0 0 0 3.5 0.5 1 1 71.023 71.023 3;4 4.2909E-10 25720 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 64.152 56.255 0 29.134 39.368 0 67.99 0 0 28 38 0 65 0 0 1 1 0 1 0 5298.7 22085 3172 21252 51277;51278 59463;59464 59464 2 VVNEENVPK Unmodified 1026.5346 0.53457439 641 B9EJA2;F6Q1W8 Cttnbp2 Cortactin-binding protein 2 yes no 0 0 0 0 5 0 1 46.54 46.54 2 0.019804 14321 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.224 12.054 20.292 18.848 0 40.102 18.032 0 19 19 0 37 19 0 1 1 0 1 1 0 1949.8 22086 641 21253 51279 59465 59465 1 VVNGPEILNK 2 Deamidation (N) 1083.5812 0.58119023 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 2 0 0 5 0 1 65.089 65.089 2 0.019843 23029 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 60.398 30.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22087 1554 21254 51280 59466 59466 584;585 1 VVNGPEILNK Unmodified 1081.6132 0.61315906 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 7.4 1.02 1 2 1 1 60.8 60.8 2;3 5.8365E-05 19597 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.42 48.829 335.15 425.71 296.66 359.02 463.04 443.32 315 426 306 352 473 426 4 5 3 4 5 4 81975 22088 1554 21254 51281;51282;51283;51284;51285 59467;59468;59469;59470;59471;59472 59470 6 VVNGPEILNK Deamidation (N) 1082.5972 0.59717465 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 1 0 0 10.4 3.2 1 1 3 63.053 63.053 2;3 0.00011507 21573 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 98.048 68.575 568.29 455.9 520.99 513.79 438.36 623.61 534 467 517 497 448 594 6 6 5 7 5 5 137520 22089 1554 21254 51286;51287;51288;51289;51290 59473;59474;59475;59476;59477;59478;59479;59480 59474 584;585 8 VVNIIPVIAK Unmodified 1064.6958 0.69576648 3384;402 A0A2R8W6V9;A0A2R8VHR7;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 8.43 4.78 2 1 2 1 1 78.421 78.421 2;3 2.6208E-11 21186 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 163.99 145.25 336.48 337.83 162.28 244.39 641.03 310.2 315 333 160 233 640 301 5 4 3 4 6 4 585920 22090 402;3384 21255 51291;51292;51293;51294;51295;51296;51297 59481;59482;59483;59484;59485;59486;59487;59488 59487 8 VVNISSLQGLK Unmodified 1156.6816 0.68157298 2604 Q8K354 Cbr3 Carbonyl reductase [NADPH] 3 yes yes 0 0 0 0 10.5 0.5 1 1 70.554 70.554 2;3 2.2181E-08 20282 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.01 85.559 108.34 89.8 110.49 82.469 88.488 145.65 102 93 111 83 93 139 1 1 1 1 1 1 22401 22091 2604 21256 51298;51299 59489;59490 59490 2 VVNISSMLGR Unmodified 1074.5856 0.5855641 2336 Q80XN0;D3Z2Y8 Bdh1 D-beta-hydroxybutyrate dehydrogenase, mitochondrial yes no 0 0 0 0 11.5 1.12 1 1 1 1 68.831 68.831 2 6.8967E-16 20076 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 178.32 138.68 507.7 360.9 703.43 352.12 79.38 235.45 478 375 687 345 83 223 3 3 4 3 1 2 81386 22092 2336 21257 51300;51301;51302;51303 59491;59492;59493;59494 59491 4 VVNIVPVIAK Unmodified 1050.6801 0.68011642 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 11 0.816 1 1 1 73.717 73.717 2;3 0.00033288 21604 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 89.247 60.849 152.41 53.495 197.97 81.491 77.404 69.29 143 56 190 79 74 65 2 1 3 1 1 1 70469 22093 431 21258 51304;51305;51306 59495;59496;59497 59496 3 VVNVELPVEANLVWQLGR Unmodified 2034.1262 0.12621015 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 11 2 1 1 93.466 93.466 3 1.268E-05 33411 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.82 59.414 49.931 45.887 45.085 58.165 18.936 49.036 47 47 46 56 19 46 1 1 1 2 1 1 7646.2 22094 2137 21259 51307;51308 59498;59499 59498 2 VVNVGGK Unmodified 671.39662 0.39662435 2785 Q91ZR1 Rab4b Ras-related protein Rab-4B no no 0 0 0 0 8 0 1 45.528 45.528 2 0.057936 11803 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.439 23.473 147.84 145.91 95.395 122.77 143.89 153.66 139 148 102 120 148 148 1 1 1 1 1 1 7998.5 22095 2785 21260 51309 59500 59500 1 VVNVSSMVSLR Unmodified 1189.6489 0.64889264 1582 P48758 Cbr1 Carbonyl reductase [NADPH] 1 yes yes 0 0 0 0 10.3 1.25 1 1 1 66.696 66.696 2;3 0.0036297 16526 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 70.195 37.303 39.397 26.659 53.384 0 0 78.884 37 28 51 0 0 74 1 1 2 0 0 2 10459 22096 1582 21261 51310;51311;51312 59501;59502;59503 59503 3 VVPEMTEILK Unmodified 1157.6366 0.63659662 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 6 0 1 76.122 76.122 2 0.011157 27651 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.841 20.394 0 40.432 0 39.925 27.454 0 0 38 0 37 28 0 0 1 0 1 1 0 3283.3 22097 2860 21262 51313 59504 59504 1 VVPFISAIASAEVK Unmodified 1429.8181 0.81806646 2087 Q60790 Rasa3 Ras GTPase-activating protein 3 yes yes 0 0 0 0 11 0 1 89.601 89.601 3 0.0065421 28610 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 46.3 27.704 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 0 4547.4 22098 2087 21263 51314 59505 59505 1 VVPGYGHAVLR Unmodified 1166.656 0.65602693 3011 Q9CZU6;Q80X68 Cs;Csl Citrate synthase, mitochondrial;Citrate synthase yes no 0 0 0 0 9.67 1.97 1 1 1 1 1 1 46.369 46.369 2;3 1.2694E-08 10262 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.3 76.913 995.24 645.57 259.25 773.46 477.26 824.92 932 656 265 730 487 781 6 4 2 5 3 6 325680 22099 3011 21264 51315;51316;51317;51318;51319;51320 59506;59507;59508;59509;59510;59511;59512 59510 7 VVPLHSLK Unmodified 891.55419 0.55418762 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 10 0 1 50.792 50.792 3 1.003E-11 11992 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 132.57 108.61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22100 3259 21265 51321 59513 59513 1 VVPSDAQQAR Unmodified 1069.5516 0.55162144 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 0 5 0 1 36.362 36.362 2 0.01041 9387 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.933 38.931 39.701 0 0 39.392 55.796 28.256 37 0 0 37 56 28 1 0 0 1 1 1 3175.2 22101 2012 21266 51322 59514 59514 1 VVPTTDHIDTEK Unmodified 1353.6776 0.67760981 2395 Q8BH58 Tiprl TIP41-like protein yes yes 0 0 0 0 5 0 1 47.367 47.367 3 0.00018374 14682 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.324 50.915 0 0 0 78.98 101.11 56.811 0 0 0 74 102 56 0 0 0 1 1 1 5025.6 22102 2395 21267 51323 59515 59515 1 VVPVADIITPNQFEAELLSGR Unmodified 2267.2161 0.21614737 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 8.25 2.9 1 2 1 2 2 95.617 95.617 3;4 2.134E-11 34592 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.316 71.12 44.587 52.456 74.694 116.42 73.031 68.005 43 51 71 112 74 65 3 4 4 6 4 3 80198 22103 2587 21268 51324;51325;51326;51327;51328;51329;51330;51331 59516;59517;59518;59519;59520;59521;59522;59523;59524;59525 59523 10 VVQDLCK Unmodified 860.44259 0.44258826 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 6.5 0.5 1 1 51.775 51.775 2 0.03385 16218 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.206 33.08 172.57 56.776 163.42 48.823 206.77 127.35 162 60 157 51 204 125 2 1 2 1 2 2 10764 22104 2860 21269 51332;51333 59526;59527 59526 2 VVQGHQQLDSYK Unmodified 1400.7048 0.70482762 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 6 0 1 43.807 43.807 3 0.045504 12443 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 37.236 22.57 0 54.264 0 55.743 0 73.554 0 51 0 51 0 69 0 1 0 1 0 1 14125 22105 1876 21270 51334 59528 59528 1 VVQSLEQTAR Unmodified 1129.6091 0.60913632 2152 Q62348 Tsn Translin yes yes 0 0 0 0 6 0 1 51.145 51.145 2 0.039677 15917 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.486 14.84 0 57.844 104.06 63.498 71.519 86.437 0 56 102 65 74 83 0 1 1 1 1 1 3312.4 22106 2152 21271 51335 59529 59529 1 VVQTDETAR Unmodified 1017.5091 0.50908792 736 D3Z061;Q8C7R4 Uba6 Ubiquitin-like modifier-activating enzyme 6 yes no 0 0 0 0 4 0 1 33.928 33.928 2 0.0011695 8647 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.806 52.313 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22107 736 21272 51336 59530 59530 1 VVQVVKPHAPLIK Unmodified 1426.9024 0.90240521 2947 Q9CQX8;Q9D6T9 Mrps36 28S ribosomal protein S36, mitochondrial yes no 0 0 0 1 11.3 0.471 2 1 55.618 55.618 3;4 0.00012407 13711 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.925 75.986 98.672 766.49 551.85 1091.6 1794.9 825.52 93 728 538 1052 1781 795 1 2 3 4 4 3 98255 22108 2947 21273 51337;51338;51339 59531;59532;59533;59534;59535 59531 5 VVQYLAELLK Unmodified 1174.6962 0.69616041 1996 Q3UMB5 Smcr8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein homolog yes yes 0 0 0 0 12 0 1 97.379 97.379 3 0.0018017 27869 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 67.726 28.704 0 0 15.148 0 0 9.594 0 0 14 0 0 9 0 0 1 0 0 1 651.01 22109 1996 21274 51340 59536 59536 1 VVSAFLK Unmodified 762.46398 0.46397563 1552 P46061 Rangap1 Ran GTPase-activating protein 1 yes yes 0 0 0 0 11 0 1 66.377 66.377 2 0.024547 18363 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.69 34.656 0 195.69 259.84 0 0 0 0 188 251 0 0 0 0 1 1 0 0 0 22963 22110 1552 21275 51341 59537 59537 1 VVSEGGKPK Unmodified 899.50763 0.50763136 1397 P17156 Hspa2 Heat shock-related 70 kDa protein 2 yes yes 0 0 0 1 7 0 1 38.757 38.757 3 0.039168 9254 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.124 36.547 137.56 205.25 151.15 201.12 159.82 163.87 130 204 160 195 167 158 1 1 1 1 1 1 12473 22111 1397 21276 51342 59538 59538 1 VVSLEAELQDISSQESKDEASLAK Unmodified 2575.2865 0.28647136 620 K3W4L0;B2RRE2;E9QAX2;Q9JMH9;E9Q405;A0A1C7ZN10;E9QA74 Myo18a Unconventional myosin-XVIIIa yes no 0 0 0 1 5 0 1 81.711 81.711 4 0.004592 30986 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 37.817 25.621 0 0 18.806 39.32 0 29.848 0 0 19 37 0 28 0 0 1 1 0 1 1858.7 22112 620 21277 51343 59539 59539 1 VVSNTIEPLTLFHK Unmodified 1596.8875 0.88754301 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 9 0.816 1 1 1 73.581 73.581 3 3.3435E-11 22165 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 118.13 90.158 217.66 117.94 107.44 274.84 155.88 320.68 204 120 111 260 158 305 2 1 1 3 1 3 87292 22113 510 21278 51344;51345;51346 59540;59541;59542 59542 3 VVSPWNSEDAK Deamidation (N) 1231.5721 0.57208211 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 1 0 0 5.5 0.5 1 1 61.121 61.121 3 0.0017442 21264 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.332 52.956 78.594 36.63 104.77 67.385 53.849 47.499 74 37 102 65 56 46 2 1 2 1 1 1 6680.2 22114 3016 21279 51347;51348 59543;59544 59543 1051 2 VVSPWNSEDAK Unmodified 1230.5881 0.58806652 3016 Q9D051 Pdhb Pyruvate dehydrogenase E1 component subunit beta, mitochondrial yes yes 0 0 0 0 8.5 2.69 1 1 1 1 57.59 57.59 2;3 1.1126E-25 19759 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 180.15 120.35 315.11 439.32 199.53 336.04 329.4 375.43 296 436 213 324 342 361 2 3 2 3 3 3 69901 22115 3016 21279 51349;51350;51351;51352 59545;59546;59547;59548 59548 4 VVSQDFPK Unmodified 918.48108 0.48108226 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 6.5 0.5 1 1 54.542 54.542 2 0.012131 16656 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 90.629 44.063 88.094 139.36 155.48 149.64 151.77 192.88 83 139 158 148 158 185 1 2 2 2 2 2 11523 22116 2286 21280 51353;51354 59549;59550 59550 2 VVSQYHELVVQAR Unmodified 1526.8205 0.82052608 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RP81 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 9 3 1 1 50.824 50.824 3 0.0065845 15693 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.585 24.753 49.358 0 0 0 113.18 85.248 46 0 0 0 111 83 1 0 0 0 1 1 6222.1 22117 2517 21281 51355;51356 59551;59552 59551 2 VVSSIEQK Unmodified 888.49165 0.49164694 1773 P63101;A0A2I3BQ03;D3YXN6 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 9.2 2.75 1 1 1 2 1 1 1 2 49.449 49.449 2;3 3.9318E-07 15141 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 169.57 92.794 2531.3 2308.2 2749.6 1957.6 2548.3 2907.8 2383 2373 2752 1959 2596 2796 9 12 11 8 8 12 1266300 22118 1773 21282 51357;51358;51359;51360;51361;51362;51363;51364;51365;51366 59553;59554;59555;59556;59557;59558;59559;59560;59561;59562;59563;59564;59565;59566 59554 14 VVSSSIVDK Unmodified 932.51786 0.51786169 1726 P62334 Psmc6 26S protease regulatory subunit 10B yes yes 0 0 0 0 7.5 0.5 1 1 53.64 53.64 2 0.0011561 15573 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.4 58.583 29.754 57.578 0 0 58.576 0 28 56 0 0 56 0 1 1 0 0 1 0 3944 22119 1726 21283 51367;51368 59567;59568 59568 2 VVSSTELSALENICK Unmodified 1648.8342 0.83418681 2430 Q8BLY2 Tarsl2 Probable threonine--tRNA ligase 2, cytoplasmic yes yes 0 0 0 0 4 0 1 55.085 55.085 3 0.046983 18778 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 32.734 11.314 98.289 108.8 159.92 90.012 111.97 0 93 111 158 93 111 0 1 1 1 1 1 0 41047 22120 2430 21284 51369 59569 59569 1 VVSSTSEEEEAFTEK Unmodified 1670.7523 0.7522909 2028 Q4KMM3;E9Q0A7;A0A2R8W6N3;A0A2R8VI09 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 3 0.707 1 2 1 58.842 58.842 2;3 1.2663E-22 20267 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 138.77 114.81 50.054 66.347 48.578 90.237 140.3 58.081 47 65 46 84 140 56 2 2 1 2 4 2 32404 22121 2028 21285 51370;51371;51372;51373 59570;59571;59572;59573 59570 4 VVSSVLQFGNISFK Unmodified 1523.8348 0.83477916 1974 Q3UH59;Q61879;Q5SV64 Myh10 Myosin-10 yes no 0 0 0 0 11.7 0.471 1 2 86.665 86.665 3;4 5.099E-22 24290 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 140.33 105.44 0 56 59.28 48.457 57.53 0 0 56 56 47 55 0 0 1 2 2 1 0 34831 22122 1974 21286 51374;51375;51376 59574;59575;59576;59577 59575 4 VVSVIAELLSTK Unmodified 1257.7544 0.75440357 2069 Q5SYD0 Myo1d Unconventional myosin-Id yes yes 0 0 0 0 4.67 5.19 2 1 102.7 102.7 3 0.00016052 34080 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 80.69 61.91 4.272 5.9679 4.985 9.5399 0 5.33 4 6 5 9 0 5 1 2 1 1 0 1 1742.9 22123 2069 21287 51377;51378;51379 59578;59579;59580 59578 3 VVTCEVDAEPPK Unmodified 1342.6439 0.64386684 2412 Q8BIG7;H3BJ37 Comtd1 Catechol O-methyltransferase domain-containing protein 1 yes no 0 0 0 0 4 0 1 52.949 52.949 3 0.0046978 17644 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 51.286 36.596 0 0 0 0 47.137 28.503 0 0 0 0 46 28 0 0 0 0 1 1 5266.4 22124 2412 21288 51380 59581 59581 1 VVTDTDETELAR Unmodified 1347.6518 0.65178899 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 5.5 4.39 1 1 1 1 49.471 49.471 2 1.8981E-22 16462 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 163.66 127.7 78.768 131.96 62.816 167.03 159.99 136.98 74 130 65 159 158 130 2 3 2 4 2 3 31972 22125 2269 21289 51381;51382;51383;51384 59582;59583;59584;59585 59583 4 VVTEEVTTTTTTITEK Unmodified 1751.904 0.90404051 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 7.67 3.86 1 1 1 63.696 63.696 3 2.3475E-06 21793 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.652 56.773 159.08 101.26 47.718 109.53 146.26 107.53 149 106 46 102 144 102 2 2 1 2 2 2 21552 22126 3449;3451;3452 21290 51385;51386;51387 59586;59587;59588 59587 3 VVTIAPGLFATPLLTTLPEK Unmodified 2080.2184 0.2183792 2879 Q99N15;A2AFQ2;O08756 Hsd17b10 3-hydroxyacyl-CoA dehydrogenase type-2 yes no 0 0 0 0 10.4 3.67 1 1 2 2 2 98.778 98.778 3;4 7.3049E-23 28190 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 131.67 120.72 234.62 108.31 258.09 68.829 235.43 103.56 220 106 248 68 229 98 6 5 8 2 4 2 182350 22127 2879 21291 51388;51389;51390;51391;51392;51393;51394;51395 59589;59590;59591;59592;59593;59594;59595;59596;59597;59598 59594 10 VVTPGASR Unmodified 785.43955 0.43955179 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 8 0 1 33.876 33.876 2 0.009767 6542 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 99.375 38.403 0 0 0 83 0 0 0 0 0 83 0 0 0 0 0 1 0 0 6178.6 22128 573 21292 51396 59599 59599 1 VVTQVINGAK Deamidation (N) 1028.5866 0.58660996 889 E9Q2X2;Q6P9K9;A0A087WPQ9 Nrxn3 Neurexin-3 yes no 0 1 0 0 7 0 1 55.191 55.191 3 0.005772 16946 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.334 31.374 39.564 27.124 0 0 56.948 47.411 37 28 0 0 56 46 1 1 0 0 1 1 2600.2 22129 889 21293 51397 59600 59600 242 1 VVTVFSVADGYSENNVFYGHHAK Unmodified 2539.2132 0.21318726 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 8 0 1 69.539 69.539 4 1.871E-12 23071 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.391 61.449 60.088 0 0 69.528 80.665 86.176 56 0 0 65 83 83 1 0 0 1 1 1 15423 22130 1263 21294 51398 59601 59601 1 VVTVGQFK Unmodified 876.5069 0.50690308 779 D3Z645;Q9QZ88;D3YYD5 Vps29 Vacuolar protein sorting-associated protein 29 yes no 0 0 0 0 10 0.816 1 1 1 58.66 58.66 2 0.00068168 17310 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 150.17 102.32 496.15 330.71 369.1 518.8 535.84 656.29 466 338 377 504 545 630 3 2 2 3 2 3 72962 22131 779 21295 51399;51400;51401 59602;59603;59604 59602 3 VVTYGMANLLTGPK Unmodified 1462.7854 0.78538612 2162 Q62465 Vat1 Synaptic vesicle membrane protein VAT-1 homolog yes yes 0 0 0 0 11.3 0.471 2 1 77.949 77.949 2;3 4.8288E-20 21029 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 124.86 98.812 0 47.979 57.713 0 160.67 134 0 46 56 0 158 130 0 1 1 0 2 2 32350 22132 2162 21296 51402;51403;51404 59605;59606;59607 59607 3 VVVCDNGTGFVK Deamidation (N) 1294.6227 0.62273747 1690 P61161 Actr2 Actin-related protein 2 yes yes 0 1 0 0 6.5 0.5 1 1 62.983 62.983 2;3 2.5186E-08 20673 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.653 63.709 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22133 1690 21297 51405;51406 59608;59609 59609 653 2 VVVCNLYPFVK Unmodified 1336.7213 0.7213293 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 8 4.97 1 1 1 78.62 78.62 3 0.00028054 23838 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.624 56.37 0 29.792 18.382 94.851 87.139 77.587 0 28 19 92 88 74 0 1 1 2 3 1 39283 22134 2977 21298 51407;51408;51409 59610;59611;59612;59613 59611 4 VVVDALSGLK Unmodified 999.59645 0.59644637 1490 P30275;A2ARP5 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 0 10.3 1.37 2 2 1 1 75.034 75.034 2;3 7.4635E-12 28301 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 168.8 97.878 470.2 636.87 879.35 364.7 833.31 500.08 441 636 851 366 822 479 3 5 5 2 4 3 773340 22135 1490 21299 51410;51411;51412;51413;51414;51415 59614;59615;59616;59617;59618;59619 59619 6 VVVDALSGLKGDLAGR Unmodified 1568.8886 0.88860564 1490 P30275;A2ARP5 Ckmt1 Creatine kinase U-type, mitochondrial yes no 0 0 0 1 10.5 0.5 1 1 79.88 79.88 3 0.016193 24973 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 42.818 14.012 69.509 0 39.684 0 48.116 65 65 0 37 0 46 65 1 0 1 0 1 1 13659 22136 1490 21300 51416;51417 59620;59621 59620 2 VVVEQLNLLVK Unmodified 1252.7755 0.77547336 2822 Q924M7 Mpi Mannose-6-phosphate isomerase yes yes 0 0 0 0 10 0.816 1 1 1 80.921 80.921 2;3 2.5307E-06 25512 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 106.62 72.366 69.605 96.936 0 29.94 142 58.688 65 93 0 28 139 56 2 2 0 1 3 1 7219.7 22137 2822 21301 51418;51419;51420 59622;59623;59624 59623 3 VVVFGAGGVGK Unmodified 988.57057 0.57056597 748 D3Z0Z5;Q91Z61 Diras1 GTP-binding protein Di-Ras1 yes no 0 0 0 0 11 0 1 63.514 63.514 2 1.273E-20 17136 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 178.08 144.08 128.11 0 109.72 0 0 0 120 0 102 0 0 0 1 0 1 0 0 0 12358 22138 748 21302 51421 59625 59625 1 VVVFIKPTCPYCR Unmodified 1637.8422 0.8421895 345 A0A1Y7VM65;Q9QUH0 Glrx Glutaredoxin-1 yes no 0 0 0 1 13 0 1 62.806 62.806 3 0.045139 22538 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 42.785 24.372 88.143 0 153.92 129.57 178.14 0 83 0 148 130 176 0 1 0 1 1 1 0 8976.4 22139 345 21303 51422 59626 59626 1 VVVHPLVLLSVVDHFNR Unmodified 1942.1153 0.11525153 1459 P26516 Psmd7 26S proteasome non-ATPase regulatory subunit 7 yes yes 0 0 0 0 12 0 1 80.251 80.251 4 0.021806 21777 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.796 26.204 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1063 22140 1459 21304 51423 59627 59627 1 VVVIESVLCPSHFR Unmodified 1640.8708 0.87084709 3286 Q9QZB7;A0A1Y7VL71 Actr10 Actin-related protein 10 yes no 0 0 0 0 10 0 1 72.736 72.736 3 0.00047939 21829 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.285 55.63 39.307 36.122 35.602 46.39 93.884 36.763 37 37 37 46 93 37 1 1 1 1 1 1 5278.5 22141 3286 21305 51424 59628 59628 1 VVVLGLLPR Unmodified 964.64334 0.64333698 2118 Q61205;D3Z7E6;D3Z2X5 Pafah1b3 Platelet-activating factor acetylhydrolase IB subunit gamma yes no 0 0 0 0 1 0 1 77.615 77.615 2 0.003876 26980 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 88.643 67.944 20.207 39.368 30.194 19.523 66.133 27.961 19 37 28 19 65 28 1 1 1 1 1 1 5157.8 22142 2118 21306 51425 59629;59630 59629 2 VVVLGSGGVGK Unmodified 970.58113 0.58113065 1695;2346;2460 Q80ZJ1;P61226;Q8BU31 Rap2a;Rap2b;Rap2c Ras-related protein Rap-2a;Ras-related protein Rap-2b;Ras-related protein Rap-2c no no 0 0 0 0 8.6 3.93 1 1 1 1 1 58.681 58.681 2;3 5.3944E-16 17285 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.32 122.29 287.16 415.18 546.8 444.55 554.88 39.442 271 417 536 444 550 37 2 4 3 3 3 1 76066 22143 2346;1695;2460 21307 51426;51427;51428;51429;51430 59631;59632;59633;59634;59635 59632 5 VVVMNNVLPR Unmodified 1139.6485 0.64849871 1044 F8WHW6;O70161 Pip5k1c Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma yes no 0 0 0 0 10.5 0.5 1 1 62.907 62.907 2 7.1658E-05 16901 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 106.36 78.182 0 0 0 109.71 94.434 57.904 0 0 0 102 97 56 0 0 0 2 2 1 23219 22144 1044 21308 51431;51432 59636;59637 59637 2 VVVPPLPGK Unmodified 904.57459 0.57458871 1258 Q78ZM0;O70492;D3Z789;D3Z6Z0 Snx3 Sorting nexin-3 yes no 0 0 0 0 10.5 0.5 1 1 65.428 65.428 2 0.00088665 17821 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.262 68.525 0 125.02 159.03 99.427 137.23 104.82 0 120 158 102 139 102 0 1 1 1 1 1 23604 22145 1258 21309 51433;51434 59638;59639 59639 2 VVVSGGR Unmodified 672.39187 0.39187332 2860 Q99LC5 Etfa Electron transfer flavoprotein subunit alpha, mitochondrial yes yes 0 0 0 0 9.25 2.28 1 1 1 1 31.478 31.478 2 0.0061468 6016 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 143.97 66.031 819.77 725.52 647.46 884.02 1214.2 560.16 771 744 676 865 1218 545 3 3 3 4 4 2 203260 22146 2860 21310 51435;51436;51437;51438 59640;59641;59642;59643 59640 4 VVVSGLPPSGSWQDLK Unmodified 1667.8883 0.88827129 1130 H7BX95;Q6PDM2;F7AI47;F6QXN3 Srsf1 Serine/arginine-rich splicing factor 1 yes no 0 0 0 0 8.5 0.5 1 1 75.004 75.004 3 4.5206E-06 24820 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 78.326 42.304 78.811 112.16 102.6 90.719 27.961 127.12 74 111 97 83 28 120 2 3 2 2 1 3 13113 22147 1130 21311 51439;51440 59644;59645;59646;59647 59647 4 VVVSQTK Unmodified 759.44905 0.44905385 1333 P09405;A0A087WRM5 Ncl Nucleolin yes no 0 0 0 0 8.5 0.5 1 1 41.72 41.72 2 0.027043 9540 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.308 43.473 0 77.762 58.288 39.411 137.24 184.77 0 74 56 37 139 177 0 2 1 1 2 2 12771 22148 1333 21312 51441;51442 59648;59649 59649 2 VVVTMEHSAK Unmodified 1099.5696 0.56957969 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 9.33 2.62 1 1 1 45.044 45.044 3 1.1789E-05 13448 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.52 55.222 187.84 54.446 122.48 70.534 162.03 0 176 65 120 74 158 0 1 1 1 1 1 0 10774 22149 3028 21313 51443;51444;51445 59650;59651;59652 59652 3 VVVVGDQSAGK Unmodified 1057.5768 0.57677356 1653 P58281;H7BX01;E0CXD1;F6U775 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 7 0 1 50.27 50.27 3 0.0012969 14595 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 63.283 31.412 98.381 129.57 126.88 123.6 0 99.138 93 130 130 120 0 93 1 1 1 1 0 1 5732.9 22150 1653 21314 51446 59653 59653 1 VVVWDWVR Unmodified 1057.5709 0.57090032 2620 Q8N7N5 Dcaf8 DDB1- and CUL4-associated factor 8 yes yes 0 0 0 0 10 0 1 79.246 79.246 2 0.041652 24725 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.032 35.743 59.729 0 60.291 0 46.807 38.106 56 0 56 0 46 37 1 0 1 0 1 1 3016 22151 2620 21315 51447 59654 59654 1 VVWLQEK Unmodified 900.5069 0.50690308 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 10 0 1 65.586 65.586 2 0.022688 18386 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.92 35.183 0 0 115.44 104.61 0 99.138 0 0 111 102 0 93 0 0 1 1 0 1 9156.5 22152 145 21316 51448 59655 59655 1 VVYDAMIEK Unmodified 1066.5369 0.53688258 644 B9EKR1;A0A0J9YVD2;B2RXS8 Ptprz1 Receptor-type tyrosine-protein phosphatase zeta;Protein-tyrosine-phosphatase yes no 0 0 0 0 6 0 1 66.305 66.305 2 0.0010171 22955 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 107.15 52.738 78.765 0 107.14 63.473 63.086 57.896 74 0 102 65 65 56 1 0 1 1 1 1 6474.1 22153 644 21317 51449 59656 59656 1 VVYIFGPPVK Unmodified 1117.6536 0.65356732 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 0 6.5 5.5 2 2 77.526 77.526 2;3 4.4842E-05 20743 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 116.54 87.195 121.35 172.84 78.105 89.953 216.84 162.24 114 168 78 88 213 158 3 4 3 4 3 4 57185 22154 1925 21318 51450;51451;51452;51453 59657;59658;59659;59660;59661 59659 5 VVYIFGPPVKEPPTDVTPTFLTTGVLSTLR Unmodified 3243.7795 0.7795027 1925 Q3THK7 Gmps GMP synthase [glutamine-hydrolyzing] yes yes 0 0 0 1 11.5 0.5 1 1 97.143 97.143 4 2.253E-27 31762 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 88.517 82.222 88.468 54.9 0 40.441 0 69.29 84 56 0 37 0 65 2 1 0 1 0 1 10934 22155 1925 21319 51454;51455 59662;59663 59662 2 VVYPTEK Unmodified 834.44872 0.4487195 3134 Q9DC07 Nebl LIM zinc-binding domain-containing Nebulette yes yes 0 0 0 0 8 0 1 48.954 48.954 2 0.010714 13376 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 121.52 62.942 98.628 100.03 110.37 72.644 88.243 165.91 93 102 111 74 93 158 1 1 1 1 1 1 12446 22156 3134 21320 51456 59664 59664 1 VVYSTLAGEQYHEVLVPK Unmodified 2031.0677 0.06769222 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 9.33 2.62 1 1 1 67.378 67.378 3;4 5.4579E-14 24532 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 123.36 82.4 198.9 220.92 112.52 213.15 165.91 214.06 186 222 111 204 175 204 2 3 1 3 3 2 54501 22157 2479 21321 51457;51458;51459 59665;59666;59667 59667 3 VVYTGIYDTEGVAPTK Unmodified 1711.8669 0.86686715 2050 Q5M8N0;F7C0H6 Cnrip1 CB1 cannabinoid receptor-interacting protein 1 yes no 0 0 0 0 8.43 2.97 3 1 1 2 67.246 67.246 2;3;4 8.9693E-27 24461 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 111.43 90.696 146.95 181.28 308.18 325.27 258.33 210.92 138 176 306 315 260 203 4 4 6 6 4 4 66290 22158 2050 21322 51460;51461;51462;51463;51464;51465;51466 59668;59669;59670;59671;59672;59673;59674;59675;59676;59677;59678 59678 11 VWAIPDTEQR Unmodified 1213.6091 0.60913632 439 A2AAN0;O35250 Exoc7 Exocyst complex component 7 yes no 0 0 0 0 7 0 1 62.103 62.103 2 0.01555 20242 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.892 39.385 20.27 23.105 0 34.391 31.081 23.631 19 23 0 32 32 23 1 1 0 1 1 1 2412.2 22159 439 21323 51467 59679 59679 1 VWDEDDDIK Unmodified 1133.4877 0.48768378 1121 H3BJZ7;Q4KUS2;E9Q263;A0A140LJ69;Q9Z1N9;A0A140LHX5;Q8K0T7 Unc13a;Unc13b;Unc13c Protein unc-13 homolog A;Protein unc-13 homolog B;Protein unc-13 homolog C yes no 0 0 0 0 4 0 1 61.035 61.035 3 0.0036194 21443 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 66.435 29.91 39.701 0 0 40.441 0 39.442 37 0 0 37 0 37 1 0 0 1 0 1 2324.8 22160 1121 21324 51468 59680 59680 1 VWFVSNIDGTHIAK Unmodified 1585.8253 0.8252771 1316 P06745;CON__Q3ZBD7 Gpi Glucose-6-phosphate isomerase yes no 0 0 0 0 10.2 1.07 2 2 1 1 70.457 70.457 3;4 8.9382E-32 20794 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 166.64 105.29 1100 1232.7 1001.9 1353.7 1261.1 1181.2 1034 1244 1030 1311 1286 1133 3 6 5 6 4 4 319300 22161 1316 21325 51469;51470;51471;51472;51473;51474 59681;59682;59683;59684;59685;59686;59687 59683 7 VWGVPIPVFHHK Unmodified 1414.7874 0.78737546 2413 Q8BIJ6;E9PWN2;E9PWN3 Iars2 Isoleucine--tRNA ligase, mitochondrial yes no 0 0 0 0 11 0 1 66.533 66.533 4 0.0019494 18438 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 56.094 39.521 39.701 0 0 0 48.116 0 37 0 0 0 46 0 1 0 0 0 1 0 3727.2 22162 2413 21326 51475 59688 59688 1 VWIISGQQLPK Unmodified 1267.7289 0.72885752 1094 Q8R3B1;G5DDB7 Plcd1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1;Phosphoinositide phospholipase C yes no 0 0 0 0 8 4.97 1 1 1 73.963 73.963 2;3 1.119E-07 19300 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.71 75.599 69.441 46.355 19.485 60.047 0 0 65 46 19 56 0 0 2 2 1 2 0 0 9444.2 22163 1094 21327 51476;51477;51478 59689;59690;59691 59691 3 VWIPDPEEVWK Unmodified 1396.7027 0.70270235 728 D3YZ62;D3Z4J3;Q99104;E9Q1F5;D6RFU0;A0A1L1SUF0 Myo5a;Myo5c Unconventional myosin-Va yes no 0 0 0 0 7 0.816 1 1 1 86.524 86.524 3 0.0011669 31223 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.82 39.967 0 0 20.558 20.252 27.359 86.915 0 0 19 19 28 84 0 0 1 1 1 3 11148 22164 728 21328 51479;51480;51481 59692;59693;59694;59695 59695 4 VWITNGGLANIFTVFAK Deamidation (N) 1850.9931 0.99307071 2567 Q8JZN5 Acad9 Acyl-CoA dehydrogenase family member 9, mitochondrial yes yes 0 1 0 0 11.5 0.5 1 1 111.36 111.36 3 1.1517E-05 36394 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.208 26.89 17.066 0 26.226 12.955 21.123 7.2174 16 0 25 12 21 7 1 0 2 1 2 1 4197 22165 2567 21329 51482;51483 59696;59697;59698 59696 944 3 VWNLANCK Unmodified 1003.4909 0.49093544 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 11 0.816 1 1 1 61.297 61.297 2;3 0.00052306 14773 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.16 77.093 99.227 111.41 0 99.296 125.11 92.37 93 111 0 93 127 90 1 1 0 1 1 1 26263 22166 1792 21330 51484;51485;51486 59699;59700;59701 59701 3 VWQVTIGTR Unmodified 1058.5873 0.58727866 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 10.5 0.5 1 1 62.494 62.494 2 0.0008516 16685 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.71 71.83 102.64 108.69 446.52 311.25 400.16 419.25 97 111 432 316 410 404 1 1 2 2 2 2 70095 22167 1792 21331 51487;51488 59702;59703 59703 2 VWSEVNQAVLDYENR Unmodified 1820.8693 0.86932676 3079 Q9D7M1 Gid8 Glucose-induced degradation protein 8 homolog yes yes 0 0 0 0 5.5 0.5 1 1 79.566 79.566 3 0.0009954 29292 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 55.755 39.089 0 0 0 60.532 35.921 0 0 0 0 56 37 0 0 0 0 1 1 0 2353.9 22168 3079 21332 51489;51490 59704;59705 59705 2 VWSVASTVR Unmodified 1003.5451 0.5450795 2663 Q8R464 Cadm4 Cell adhesion molecule 4 yes yes 0 0 0 0 10.5 0.5 1 1 57.208 57.208 2 0.00056706 14455 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.44 79.409 147.59 85.833 305.36 202.51 120.57 0 139 93 296 204 120 0 1 1 2 2 1 0 37236 22169 2663 21333 51491;51492 59706;59707 59707 2 VWVVATK Unmodified 801.47487 0.47487467 1760 P63005 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes yes 0 0 0 0 9 4.64 1 1 2 62.907 62.907 2;3 0.0052934 15256 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 89.673 35.516 499.72 337.11 304.8 155.59 209.27 416.95 469 352 297 152 204 396 4 3 2 2 2 3 182680 22170 1760 21334 51493;51494;51495;51496 59708;59709;59710;59711 59711 4 VWYPMTGWK Unmodified 1166.5583 0.55828672 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 6.5 5.5 1 1 78.328 78.328 2 0.00030318 21115 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.69 76.959 14.812 58.262 19.35 0 71.056 62.998 14 56 19 0 70 61 1 2 1 0 2 2 10878 22171 570 21335 51497;51498 59712;59713 59713 2 VYAEANSQESADR Unmodified 1438.6325 0.63245054 2473 Q8BWW3;Q9CYR6 Pgm3 Phosphoacetylglucosamine mutase yes no 0 0 0 0 3 0 1 36.891 36.891 3 0.0017223 10623 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.136 35.263 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 3002.7 22172 2473 21336 51499 59714 59714 1 VYAEDPYK Unmodified 983.46001 0.46001246 2782 Q91ZA3 Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial yes yes 0 0 0 0 5 0 1 51.514 51.514 2 0.016716 16735 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.297 45.101 39.262 45.712 34.968 47.715 25.437 48.31 37 46 37 46 28 46 1 1 1 1 1 1 2597.7 22173 2782 21337 51500 59715 59715 1 VYALLLGDWK Unmodified 1176.6543 0.6542956 2256 Q6RI63 Fam120b Constitutive coactivator of peroxisome proliferator-activated receptor gamma yes yes 0 0 0 0 12 0 1 92.381 92.381 2 0.00081231 26431 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.309 62.089 14.936 0 14.429 14.442 0 0 14 0 14 14 0 0 1 0 1 1 0 0 916.58 22174 2256 21338 51501 59716 59716 1 VYALPEDLVEVKPK Unmodified 1598.892 0.89195969 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 0 0 1 8 0 1 72.533 72.533 3 0.002946 24473 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.212 24.199 0 78.736 0 71.045 0 0 0 74 0 65 0 0 0 1 0 1 0 0 5662.9 22175 269 21339 51502 59717 59717 1 VYALPEDLVEVNPK Unmodified 1584.8399 0.83992412 2119 Q61233 Lcp1 Plastin-2 yes yes 0 0 0 0 6 0 1 78.209 78.209 3 0.0016696 28607 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 50.563 23.153 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22176 2119 21340 51503 59718 59718 1 VYAYGLALK Unmodified 996.56442 0.56441796 3237 Q9JKX6 Nudt5 ADP-sugar pyrophosphatase yes yes 0 0 0 0 10.5 0.5 1 1 69.341 69.341 2 0.00087587 19666 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.75 101.87 0 72.24 70.324 39.747 36.876 0 0 69 69 37 37 0 0 1 1 1 1 0 15429 22177 3237 21341 51504;51505 59719;59720 59720 2 VYCGHEYTVNNLK Unmodified 1595.7402 0.74022685 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 8 0 1 50.33 50.33 3 0.00012826 14058 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.085 48.887 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22178 158 21342 51506 59721 59721 1 VYDLNEIAK Unmodified 1063.555 0.55497548 302 A0A1L1SSF8;Q91V76 Ester hydrolase C11orf54 homolog yes no 0 0 0 0 6 0 1 64.515 64.515 2 0.0077675 22140 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.349 20.471 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22179 302 21343 51507 59722 59722 1 VYDQMPEPR Unmodified 1133.5175 0.51754412 3138 Q9DC70 Ndufs7 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial yes yes 0 0 0 0 4 0 1 48.605 48.605 2 0.024214 15612 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.691 35.586 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22180 3138 21344 51508 59723 59723 1 VYEEDAVPGLTPCR Unmodified 1604.7505 0.75045718 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 7.17 4.18 1 1 2 2 61.331 61.331 2;3 8.5958E-25 21408 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 150.46 126.61 256.99 195.02 201.67 235.24 164.48 333.23 241 196 196 223 167 317 6 5 6 5 2 6 103070 22181 2998 21345 51509;51510;51511;51512;51513;51514 59724;59725;59726;59727;59728;59729;59730;59731 59728 8 VYEELLAIPVVR Unmodified 1399.8075 0.80750177 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 7 0 1 85.224 85.224 3 0.0063605 31087 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 50.149 29.985 0 20.216 0 30.604 0 49.036 0 19 0 28 0 46 0 1 0 1 0 1 2014 22182 2536 21346 51515 59732 59732 1 VYEGERPLTK Unmodified 1190.6295 0.62953741 1419 P20029 Hspa5 78 kDa glucose-regulated protein yes yes 0 0 0 1 9.5 3.5 1 1 44.061 44.061 3 0.0069392 12789 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.73 30.351 369.72 493.42 561.79 600.09 542.55 577.21 350 496 573 589 564 556 2 2 2 2 2 2 41127 22183 1419 21347 51516;51517 59733;59734 59733 2 VYEGGSNVDQFVTR Unmodified 1569.7423 0.74233534 2784 Q91ZP9 Necab2 N-terminal EF-hand calcium-binding protein 2 yes yes 0 0 0 0 5 0 1 57.56 57.56 3 0.0014594 19581 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.29 31.999 0 0 38.349 37.827 17.458 19.756 0 0 37 37 19 19 0 0 1 1 1 1 4254.9 22184 2784 21348 51518 59735 59735 1 VYEGSILEADCDILIPAASEK Unmodified 2292.1195 0.11952937 1458 P26443;F7CFA5 Glud1 Glutamate dehydrogenase 1, mitochondrial yes no 0 0 0 0 7.25 3.46 2 1 2 1 2 84.514 84.514 3;4 3.4411E-11 32115 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 96.379 75.146 218.69 175.91 270.48 221.27 213.15 176.78 205 177 268 218 213 167 5 6 7 5 4 4 93476 22185 1458 21349 51519;51520;51521;51522;51523;51524;51525;51526 59736;59737;59738;59739;59740;59741;59742;59743;59744;59745;59746 59738 11 VYEVATFYTMYNR Unmodified 1655.7654 0.76537896 3074 Q9D6J6;M0QWP9;D6RGN4 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 0 0 10.7 1.7 1 1 1 77.02 77.02 2;3 5.9138E-06 25913 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.65 87.579 20.244 86.082 115.38 28.398 77.404 39.442 19 84 111 28 74 37 1 3 2 1 2 1 16080 22186 3074 21350 51527;51528;51529 59747;59748;59749 59747 3 VYFIYEGYQGLVDGGSNIVEAK Unmodified 2420.19 0.1899922 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 9.25 2.28 2 2 2 2 91.514 91.514 3;4 2.817E-13 32423 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.467 63.875 48.166 42.663 0 107.52 88.765 147.51 45 43 0 102 89 140 3 3 0 5 4 5 32114 22187 2507 21351 51530;51531;51532;51533;51534;51535;51536;51537 59750;59751;59752;59753;59754;59755;59756;59757;59758 59756 9 VYGALMWSLGK Unmodified 1223.6373 0.63726532 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 1 0 1 85.481 85.481 2 0.0029589 30247 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 75.378 11.899 0 0 0 0 19.564 9.0357 0 0 0 0 19 9 0 0 0 0 1 1 1161.4 22188 3271;3353 21352 51538 59759 59759 1 VYGGDDR Unmodified 780.34023 0.34023168 158 E9PYA3;A0A0R4J052;G5E8T9;Q99KB8;E9Q2H8;D3YWI0;D3YUX8 Hagh Hydroxyacylglutathione hydrolase, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 31.279 31.279 2 0.02344 7414 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 103.02 52.051 78.764 62.949 53.834 148.72 0 157.77 74 65 56 139 0 148 1 1 1 2 0 2 18448 22189 158 21353 51539;51540 59760;59761 59760 2 VYGLIGR Unmodified 776.45447 0.45447358 1081 Q9JM52;G3X9G2;Q5SXG3;Q5SXG1;F7AMS7 Mink1 Misshapen-like kinase 1 yes no 0 0 0 0 10 0 1 56.492 56.492 2 0.026965 14399 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.457 13.775 138.09 116.09 136.44 141.45 124.52 144.62 130 120 139 139 130 139 1 1 1 1 1 1 12234 22190 1081 21354 51541 59762 59762 1 VYGSFLVNPEPGYNVSLLYDLENLPASK Unmodified 3097.5648 0.56481847 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 10.2 2.32 2 1 2 101.43 101.43 3;4;5 5.7322E-18 35828 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.569 62.053 78.795 72.747 79.187 115.76 87.935 175.94 74 74 79 111 89 167 2 2 2 3 4 4 28723 22191 2971 21355 51542;51543;51544;51545;51546 59763;59764;59765;59766;59767;59768 59763 6 VYGTAAVNSPVVSWK Unmodified 1576.8249 0.82494275 799 E0CXB9;Q61301 Ctnna2 Catenin alpha-2 yes no 0 0 0 0 9 0 1 69.259 69.259 3 0.001133 22364 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.828 32.271 0 0 45.43 97.461 78.684 106.49 0 0 46 93 83 102 0 0 1 1 1 1 8251.5 22192 799 21356 51547 59769 59769 1 VYGTGSLALYEK Unmodified 1299.6711 0.67106787 484;2493 A2AKU9;A2AKV2;A2AKV3;A2AKV1;A2AKV0;Q8C2Q8;Q91VR2 Atp5c1 ATP synthase subunit gamma;ATP synthase subunit gamma, mitochondrial no no 0 0 0 0 10 2.16 1 1 1 65.809 65.809 3 1.6291E-12 21381 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.51 83.363 0 58.198 324.62 309.81 282.02 338.4 0 56 316 306 291 325 0 1 3 3 2 2 153170 22193 484;2493 21357 51548;51549;51550 59770;59771;59772 59770 3 VYGTIKPAFNQNPVVAK Unmodified 1845.0149 0.014868788 2343 Q80Z38;D3Z5K8;A0A1C7ZMY3 Shank2 SH3 and multiple ankyrin repeat domains protein 2 yes no 0 0 0 1 11 0 1 62.855 62.855 3 8.9736E-27 16885 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 112.17 96.407 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22194 2343 21358 51551 59773 59773 1 VYGYVTNSK Unmodified 1029.5131 0.51311067 3250 Q9JME7 Trappc2l Trafficking protein particle complex subunit 2-like protein yes yes 0 0 0 0 9 0 1 52.232 52.232 2 0.016682 14185 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.016 44.044 20.292 18.848 0 0 22.726 38.794 19 19 0 0 23 37 1 1 0 0 1 1 2519 22195 3250 21359 51552 59774 59774 1 VYIASSSGSTAIK Unmodified 1282.6769 0.67688153 3219 Q9JJU8 Sh3bgrl SH3 domain-binding glutamic acid-rich-like protein yes yes 0 0 0 0 9.67 0.471 1 2 55.105 55.105 2;3 1.5351E-10 13791 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 117.52 75.536 158.82 155.57 76.492 26.277 261.14 249.45 149 157 74 28 259 241 2 2 2 1 3 3 31270 22196 3219 21360 51553;51554;51555 59775;59776;59777 59777 3 VYIGSFWSHPLLIPDNR Unmodified 2013.0472 0.047231549 3271;3353 Q9QXY6;Q9WVK4 Ehd3;Ehd1 EH domain-containing protein 3;EH domain-containing protein 1 no no 0 0 0 0 12 0 1 82.427 82.427 3 0.0049108 22815 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.059 31.778 0 0 0 47 0 0 0 0 0 47 0 0 0 0 0 1 0 0 9687.9 22197 3271;3353 21361 51556 59778 59778 1 VYIILAKPER Unmodified 1200.723 0.72304386 2012 Q3UVX5;E9QMC2 Grm5 Metabotropic glutamate receptor 5 yes no 0 0 0 1 12 0 1 62.716 62.716 3 0.0020033 15216 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.417 41.017 138.89 118.31 0 77.198 195.88 162.84 130 120 0 74 196 158 1 1 0 1 1 1 11914 22198 2012 21362 51557 59779 59779 1 VYINLDK Unmodified 863.47527 0.4752686 1610 P52503 Ndufs6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial yes yes 0 0 0 0 9 0 1 62.441 62.441 2 0.019669 19119 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 107.59 14.669 167.61 212.94 142.9 129.66 207.79 172.09 158 213 150 130 210 167 1 1 1 1 1 1 18386 22199 1610 21363 51558 59780 59780 1 VYINYYDMNAANVGWNGSTFA Deamidation (N) 2370.0263 0.02629769 1510 P34884 Mif Macrophage migration inhibitory factor yes yes 0 1 0 0 10 3 1 1 96.831 96.831 3 6.1093E-07 35574 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.827 57.731 27.728 0 28.507 49.777 52.502 18.919 26 0 28 48 53 19 2 0 1 2 2 1 7035.9 22200 1510 21364 51559;51560 59781;59782 59781 561;562 2 VYLEQNLAAQDNVLR Deamidation (N) 1745.8948 0.89481323 2234 Q6PB44 Ptpn23 Tyrosine-protein phosphatase non-receptor type 23 yes yes 0 1 0 0 6 0 1 67.646 67.646 3 0.016792 23628 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 44.294 23.913 0 29.009 46.823 27.134 36.136 38.411 0 28 46 28 37 37 0 1 1 1 1 1 1443 22201 2234 21365 51561 59783 59783 887 1 VYLLYRPGHYDILYK Unmodified 1912.0247 0.024705193 2293 Q7TQI3;D3YWF6 Otub1 Ubiquitin thioesterase OTUB1 yes no 0 0 0 1 11 0 1 69.173 69.173 4 9.4801E-05 19654 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.649 64.673 0 0 0 178.39 220.2 263.41 0 0 0 167 227 253 0 0 0 1 1 1 36878 22202 2293 21366 51562 59784 59784 1 VYLQNEYK Unmodified 1055.5288 0.52876073 2235 Q6PB66 Lrpprc Leucine-rich PPR motif-containing protein, mitochondrial yes yes 0 0 0 0 8 0 1 53.984 53.984 2 0.010851 15762 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.815 67.991 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 3691.8 22203 2235 21367 51563 59785 59785 1 VYLVGNEQK Unmodified 1048.5553 0.55530983 1854 P97492 Rgs14 Regulator of G-protein signaling 14 yes yes 0 0 0 0 8 0 1 54.555 54.555 3 0.0014758 15992 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.516 45.396 0 67.757 83.94 64.711 70.767 106.71 0 65 84 65 74 102 0 1 1 1 1 1 4408.8 22204 1854 21368 51564 59786 59786 1 VYLYEGLLGR Unmodified 1181.6445 0.64445919 204 A0A0R4J1F4;A2AGR0;Q80U28;A2AGQ6;E9QN47;A2AGQ4 Madd MAP kinase-activating death domain protein yes no 0 0 0 0 10 1 1 1 75.666 75.666 2 0.0036945 22501 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.455 46.451 0 0 67.406 65.628 74.389 0 0 0 65 65 74 0 0 0 1 1 1 0 4968.5 22205 204 21369 51565;51566 59787;59788 59788 2 VYLYTHLR Unmodified 1063.5815 0.581465 2630 Q8R0A7;Q3TA40;Q8BQB5 Kiaa0513;6430548M08Rik Uncharacterized protein KIAA0513 yes no 0 0 0 0 11.3 0.471 2 1 50.888 50.888 2;3 0.0023585 10617 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.064 48.99 39.342 2309.9 60.394 1625.7 150.32 49.036 37 2171 56 1490 148 46 1 2 1 3 2 1 59224 22206 2630 21370 51567;51568;51569 59789;59790;59791;59792;59793 59793 5 VYMPCLYVYNK Unmodified 1448.6832 0.68322924 3264 Q9QXB9 Drg2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 0 11 0 1 75.16 75.16 3 0.0012111 22329 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 40.692 0 0 49.772 0 0 69.29 0 0 46 0 0 65 0 0 1 0 0 1 3601.1 22207 3264 21371 51570 59794 59794 1 VYMYQLFR Unmodified 1118.5583 0.55828672 787 D3Z7E5;Q2NL51 Gsk3a Glycogen synthase kinase-3 alpha yes no 0 0 0 0 6.5 5.5 1 1 74.405 74.405 2 0.019377 25570 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 78.616 42.43 39.701 0 0 80.103 41.402 88.363 37 0 0 74 46 84 1 0 0 1 1 1 9004.7 22208 787 21372 51571;51572 59795;59796 59795 2 VYNEAGVTFT Unmodified 1099.5186 0.51858998 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8 3.56 1 1 1 67.142 67.142 2 4.9119E-05 23507 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 114.28 101.1 196.95 64.479 265.68 189.16 120.6 264.12 185 65 251 185 120 251 3 1 3 3 2 4 125080 22209 1458 21373 51573;51574;51575 59797;59798;59799;59800 59799 4 VYNIEFNPPK Unmodified 1219.6237 0.62372375 3321 Q9WTP7;F6RP11 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 0 7 0 1 66.915 66.915 3 0.0012402 22487 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.067 43.257 48.898 35.278 47.409 0 0 49.036 46 37 46 0 0 46 1 1 1 0 0 1 3210.3 22210 3321 21374 51576 59801 59801 1 VYNVTQHAVGIIVNK Unmodified 1653.9202 0.92024012 2935 Q9CQM8;O09167 Rpl21 60S ribosomal protein L21 yes no 0 0 0 0 11 0.816 1 1 1 65.258 65.258 3 1.3665E-11 15984 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.45 93.8 53.908 133.44 74.318 112.11 170.61 29.848 51 130 74 106 167 28 2 3 2 2 2 1 18770 22211 2935 21375 51577;51578;51579 59802;59803;59804 59804 3 VYNWDVK Unmodified 922.45487 0.45486751 1701 P61759 Vbp1 Prefoldin subunit 3 yes yes 0 0 0 0 8 0 1 61.177 61.177 2 0.029415 19137 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.531 59.65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22212 1701 21376 51580 59805 59805 1 VYPSSLSK Unmodified 879.47018 0.47018322 2264 Q6ZQ38 Cand1 Cullin-associated NEDD8-dissociated protein 1 yes yes 0 0 0 0 9 0.816 1 1 1 51.967 51.967 2 0.010828 12417 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.909 27.488 238.69 121.62 147.36 231.78 319.12 456.74 223 121 148 222 321 437 2 2 2 2 2 3 45395 22213 2264 21377 51581;51582;51583 59806;59807;59808 59808 3 VYQGLYCVAIR Unmodified 1340.6911 0.69109181 2829 Q99JI4;A0A286YDW8 Psmd6 26S proteasome non-ATPase regulatory subunit 6 yes no 0 0 0 0 10 0 1 66.819 66.819 2 0.0030892 19035 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.165 47.567 0 39.368 0 25.139 0 14.924 0 37 0 23 0 14 0 1 0 1 0 1 3625 22214 2829 21378 51584 59809 59809 1 VYQTSPTDEDEEDDESSAAALFTSELLR Unmodified 3117.3786 0.37859342 615 E0CZF8;E0CZD7;E0CXD6;E0CY98;E9PUL9;B9EKN8;B2RQ80;P83510 Tnik Traf2 and NCK-interacting protein kinase yes no 0 0 0 0 4 0 1 90.768 90.768 3 2.568E-22 33862 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.48 80.576 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 620.07 22215 615 21379 51585 59810 59810 1 VYRDDIGR Unmodified 992.50394 0.50394297 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 1 8 3.56 1 1 1 34.848 34.848 3 0.0059329 8288 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.802 56.933 167.89 257.39 210.4 285.47 310.8 302.4 158 251 204 278 318 292 2 2 2 3 2 2 36232 22216 1836 21380 51586;51587;51588 59811;59812;59813 59812 3 VYSADGEFLFK Unmodified 1274.6183 0.61830402 689 Q3TDT0;D3YUY7;Q9R1R2 Trim3 Tripartite motif-containing protein 3 yes no 0 0 0 0 7 0 1 74.757 74.757 2 0.0014301 26114 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.624 59.526 19.949 57.828 24.573 48.329 25.739 38.708 19 56 28 46 28 37 1 1 1 1 1 1 2185.4 22217 689 21381 51589 59814 59814 1 VYSILASTLK Unmodified 1093.6383 0.63831118 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 0 4.67 5.19 2 1 80.742 80.742 2 2.3273E-09 27758 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 158.57 109.14 124.71 40.325 105.62 87.723 163.34 60.58 117 43 104 87 162 59 4 2 3 2 4 2 19906 22218 1263 21382 51590;51591;51592 59815;59816;59817;59818 59815 4 VYSILASTLKDEGK Unmodified 1522.8243 0.82427405 1263 O88342;A0A0J9YU05 Wdr1 WD repeat-containing protein 1 yes no 0 0 0 1 10.8 0.829 2 1 1 74.439 74.439 2;3;4 2.9301E-23 21941 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 149.49 121.48 152.35 217.66 113.16 126.16 223.13 217.49 143 216 116 121 226 210 4 5 2 3 5 5 108500 22219 1263 21383 51593;51594;51595;51596 59819;59820;59821;59822;59823 59822 5 VYSLFLDESR Unmodified 1227.6136 0.61355299 3320 Q9WTM5 Ruvbl2 RuvB-like 2 yes yes 0 0 0 0 8 0 1 74.967 74.967 2 0.0022108 25639 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.898 60.855 0 58.672 54.543 56.771 63.064 67.49 0 56 56 56 65 65 0 1 1 1 1 1 5998.5 22220 3320 21384 51597 59824 59824 1 VYSPHVLNLTLIDLPGITK Unmodified 2092.1932 0.19322708 960;1082 E9QLL2;Q8BZ98;Q3TCR7;G3X9G4;Q3T9X3;F8WIV5;P39054;G3UZZ3 Dnm3;Dnm2 Dynamin-3;Dynamin-2 no no 0 0 0 0 10.5 0.5 1 1 86.42 86.42 3;4 3.1566E-08 27772 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.157 72.507 0 18.079 29.751 0 37.714 28.772 0 18 28 0 37 28 0 2 1 0 1 1 11425 22221 960;1082 21385 51598;51599 59825;59826 59825 2 VYSPHVLNLTLVDLPGMTK Unmodified 2096.134 0.13399765 118;1534 A0A0J9YUN4;A0A0J9YUE9;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 10.6 1.02 1 1 2 1 82.552 82.552 3;4 1.9764E-10 22846 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 112.56 85.064 95.979 183.62 62.1 140.57 0 111.93 90 183 62 132 0 105 3 5 2 3 0 3 68618 22222 118;1534 21386 51600;51601;51602;51603;51604 59827;59828;59829;59830;59831 59831 5 VYSTSVTGSR Unmodified 1055.5247 0.52473799 2747 Q91VW3;I7HPY0 Sh3bgrl3 SH3 domain-binding glutamic acid-rich-like protein 3 yes no 0 0 0 0 9.14 2.23 1 1 1 1 1 1 1 39.586 39.586 2 4.8005E-62 8907 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 178.22 111.6 171.32 230.93 319.28 177.63 294.74 123.16 162 232 316 185 292 120 4 4 5 5 3 1 66026 22223 2747 21387 51605;51606;51607;51608;51609;51610;51611 59832;59833;59834;59835;59836;59837;59838;59839 59835 8 VYTDVNTHRPR Unmodified 1356.6898 0.68984625 2083 Q60737;Q6NSS6;A2ANR6 Csnk2a1 Casein kinase II subunit alpha yes no 0 0 0 1 13 0 1 31.044 31.044 3 0.011125 7117 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.348 43.142 0 0 30.296 0 38.702 0 0 0 28 0 37 0 0 0 1 0 1 0 1954.5 22224 2083 21388 51612 59840 59840 1 VYTFNSVR Unmodified 984.50288 0.50288033 1042;1096;487;928 G5E829;Q3UHH0;F8WHB1;Q9R0K7;S4R1C4;Q8C048;A2ALL9;Q0VF55;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b2;Atp2b3;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 no no 0 0 0 0 9 1 1 1 51.679 51.679 2 0.0073953 12269 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.57 43.46 327.3 477.79 267.9 554.51 236.25 677.63 306 474 274 526 250 642 1 2 1 2 1 2 58192 22225 1096;1042;487;928 21389 51613;51614 59841;59842 59842 2 VYTLSTAGQYWELCK Unmodified 1817.8658 0.86582129 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 9 0 1 77.87 77.87 3 0.0010042 26357 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.812 26.515 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22226 2323 21390 51615 59843 59843 1 VYTLTPFLANNR Unmodified 1407.751 0.75104953 1145 J3QNU6;Q8BWG8;F7DF62 Arrb1 Beta-arrestin-1 yes no 0 0 0 0 12 0 1 73.954 73.954 2 0.00092735 19361 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 78.655 59.384 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 2328.6 22227 1145 21391 51616 59844 59844 1 VYTPVGK Unmodified 762.42759 0.42759012 1899 Q11011;F6QYF8;E9Q039;E9Q6F4;F7ANF4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 9.5 0.5 1 1 48.85 48.85 2 0.021458 12535 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.39 55.351 267.64 0 283.05 319.61 451.96 392.18 251 0 276 314 459 380 1 0 1 1 2 2 39804 22228 1899 21392 51617;51618 59845;59846 59845 2 VYTVVDEMFLAGEIR Unmodified 1740.8757 0.87565769 1732 P62743;A0A0U1RQ06 Ap2s1 AP-2 complex subunit sigma yes no 0 0 0 0 7 0 1 93.214 93.214 3 0.001085 34499 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.501 34.491 0 0 19.685 19.594 0 0 0 0 19 19 0 0 0 0 1 1 0 0 927.97 22229 1732 21393 51619 59847 59847 1 VYVADSLISSAGEGLFSK Unmodified 1841.9411 0.94109472 2718 Q8VHL1 Setd7 Histone-lysine N-methyltransferase SETD7 yes yes 0 0 0 0 13 0 1 88.455 88.455 3 6.1833E-08 34932 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 75.461 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 3598.8 22230 2718 21394 51620 59848 59848 1 VYVGNASVAQDITQLQK Unmodified 1832.9632 0.96322715 571 B1AQF4;Q9D7X3;H3BKL8 Dusp3 Dual specificity protein phosphatase 3 yes no 0 0 0 0 9 2.35 1 2 1 71.465 71.465 3;4 3.7521E-25 24012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.23 106.6 236.89 91.653 184.16 165.95 0 236.65 222 92 176 157 0 222 3 2 2 3 0 2 31026 22231 571 21395 51621;51622;51623;51624 59849;59850;59851;59852 59851 4 VYVGNLGNNGNK Deamidation (N) 1248.6099 0.6098646 1838 P84104;A2A4X6 Srsf3;Gm12355 Serine/arginine-rich splicing factor 3 yes no 0 1 0 0 8 0 1 55.392 55.392 3 0.00056631 16430 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.653 56.324 78.552 41.851 107.46 0 0 78.884 74 46 102 0 0 74 1 1 1 0 0 1 4170.3 22232 1838 21396 51625 59853 59853 745 1 VYVGNLGTGAGK Unmodified 1134.6033 0.60332266 2426 Q8BL97 Srsf7 Serine/arginine-rich splicing factor 7 yes yes 0 0 0 0 10.7 1.7 1 1 1 56.235 56.235 2;3 8.3837E-18 14359 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 146.71 94.229 207.24 139.88 216.35 104.92 38.702 108.73 195 148 213 102 37 102 3 3 3 1 1 1 25505 22233 2426 21397 51626;51627;51628 59854;59855;59856 59855 3 VYVPALIFGQLLTSSNYDDDEK Unmodified 2486.2217 0.22168626 2177 Q64511 Top2b DNA topoisomerase 2-beta yes yes 0 0 0 0 12 0 1 104.22 104.22 4 0.00021598 29124 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 46.027 32.011 6.2959 5.6401 19.106 0 0 0 6 6 18 0 0 0 1 1 1 0 0 0 549.56 22234 2177 21398 51629 59857 59857 1 VYVQQNNVENVYNLGLIIFR Unmodified 2394.2696 0.26957993 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 10 0 1 95.466 95.466 3 3.2464E-09 31179 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.11 56.23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22235 3245 21399 51630 59858 59858 1 VYYDISSAK Unmodified 1044.5128 0.51277632 347 F8VPK5;A0A1Y7VMN0;P70336;A0A1Y7VLD1 Rock2 Rho-associated protein kinase;Rho-associated protein kinase 2 yes no 0 0 0 0 7.5 0.5 1 1 58.73 58.73 3 0.0092438 18614 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 56.563 29.448 59.91 94.912 0 109.62 98.98 77.921 56 93 0 102 102 74 1 2 0 2 2 1 7022.2 22236 347 21400 51631;51632 59859;59860 59859 2 VYYDLVK Unmodified 898.48002 0.48001963 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 8 0 1 64.845 64.845 2 0.031273 20836 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.265 46.302 98.704 79.737 114.82 0 104.41 66.31 93 83 111 0 102 65 1 1 1 0 1 1 9317.7 22237 628 21401 51633 59861 59861 1 VYYSQTTQTESRPLVAPGIR Unmodified 2265.1753 0.17534519 3247 Q9JM63 Kcnj10 ATP-sensitive inward rectifier potassium channel 10 yes yes 0 0 0 1 8 0 1 54.338 54.338 3 0.00050145 15918 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.966 35.201 19.219 18.92 0 9.837 0 0 18 19 0 9 0 0 1 1 0 1 0 0 2101.3 22238 3247 21402 51634 59862 59862 1 WAFSMYDLDGNGYISK Deamidation (N) 1866.8135 0.81345137 2763 Q91X97;D3YVA2;D3Z2Z8 Ncald Neurocalcin-delta yes no 0 1 0 0 10.5 2.5 1 1 89.043 89.043 3 3.6996E-19 32281 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 102.64 83.35 0 0 48.152 36.367 64.003 67.464 0 0 46 37 65 65 0 0 1 1 1 1 4600.7 22239 2763 21403 51635;51636 59863;59864 59863 990 2 WAGGGFLSTVGDLLK Unmodified 1519.8035 0.80347903 3161 Q9EP89 Lactb Serine beta-lactamase-like protein LACTB, mitochondrial yes yes 0 0 0 0 10 0 1 95.541 95.541 3 0.00029664 31197 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 66.285 35.457 0 39.368 0 0 38.702 0 0 37 0 0 37 0 0 1 0 0 1 0 5009.1 22240 3161 21404 51637 59865 59865 1 WAGLSIGQDIEVALYSFDK Unmodified 2111.0575 0.057521464 1554 P46460;G3UX86 Nsf Vesicle-fusing ATPase yes no 0 0 0 0 9 0 1 109.21 109.21 3 0.013054 37459 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 35.389 7.7405 3.0395 12.232 19.809 0 0 0 3 12 19 0 0 0 1 1 1 0 0 0 688.82 22241 1554 21405 51638 59866 59866 1 WAGVSLDQSALLPLR Unmodified 1624.8937 0.89369102 1603 P51830;E9Q706 Adcy9 Adenylate cyclase type 9 yes no 0 0 0 0 9.5 0.5 1 1 84.493 84.493 3 2.0276E-05 29342 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.911 49.973 30.044 0 0 30.604 19 0 28 0 0 28 19 0 1 0 0 1 1 0 3615 22242 1603 21406 51639;51640 59867;59868 59867 2 WAHLSPSEFSQLQK Unmodified 1656.826 0.82600539 2200 Q6NS52;Q3TSN3;A0A1Y7VLG5 Dgkb Diacylglycerol kinase beta yes no 0 0 0 0 9 0 1 65.572 65.572 3 0.0050156 20598 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 48.277 29.681 79.182 43.605 0 61.208 0 0 74 46 0 56 0 0 1 1 0 1 0 0 3364.3 22243 2200 21407 51641 59869 59869 1 WAIAQLNYADMLK Unmodified 1535.7806 0.7806351 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 0 10.5 0.5 1 1 86.977 86.977 3 1.2055E-06 27594 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.324 57.943 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 6025.2 22244 3204 21408 51642;51643 59870;59871 59871 2 WALSPSSTLR Unmodified 1116.5928 0.59275797 1893 Q08642 Padi2 Protein-arginine deiminase type-2 yes yes 0 0 0 0 10 0 1 61.285 61.285 2 0.0048417 16641 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.816 1.9013 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22245 1893 21409 51644 59872 59872 1 WALSQSNPSALR Unmodified 1328.6837 0.68369824 1875 Q01853 Vcp Transitional endoplasmic reticulum ATPase yes yes 0 0 0 0 10.8 1.34 1 2 1 1 1 58.15 58.15 2;3 4.6081E-33 15316 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 187.85 130.57 247.43 342.07 307.28 247.52 266.04 411.62 232 342 311 241 269 393 2 5 3 2 3 4 102640 22246 1875 21410 51645;51646;51647;51648;51649;51650 59873;59874;59875;59876;59877;59878 59874 6 WAPPLER Unmodified 867.46029 0.46028724 1944 Q3TXX4;A0A1B0GRU0;A0A0R4J0A6;Q8BLE7;D3YTT3;Q61983;Q5SZA1;Q8BFU8 Slc17a7;Slc17a6;Slc17a8;Slc17a1;Slc17a2 Vesicular glutamate transporter 1;Vesicular glutamate transporter 2;Sodium-dependent phosphate transport protein 1;Sodium-dependent phosphate transport protein 3;Vesicular glutamate transporter 3 yes no 0 0 0 0 8 0 1 55.661 55.661 2 0.048867 16462 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.847 52.644 69.42 64.479 0 61.208 0 118.33 65 65 0 56 0 111 1 1 0 1 0 1 28768 22247 1944 21411 51651 59879 59879 1 WARPPISMNFEVPFAPSGLK Unmodified 2243.1561 0.15613007 1836 Q3TWV4;P84091 Ap2m1 AP-2 complex subunit mu yes no 0 0 0 1 12 0.707 1 2 1 84.279 84.279 3;4 5.6155E-08 26325 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.207 56.507 69.52 20.216 74.744 78.632 48.116 0 65 19 74 74 46 0 2 1 2 2 1 0 55123 22248 1836 21412 51652;51653;51654;51655 59880;59881;59882;59883;59884 59880 5 WASEPEHDHR Unmodified 1262.5428 0.54284767 3030 Q9D0M3 Cyc1 Cytochrome c1, heme protein, mitochondrial yes yes 0 0 0 0 4 0 1 28.674 28.674 4 0.038299 6231 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 40.496 22.688 30.044 0 0 40.441 0 9.594 28 0 0 37 0 9 1 0 0 1 0 1 2021.3 22249 3030 21413 51656 59885 59885 1 WASQYLK Unmodified 894.45995 0.45995289 1649 P57759 Erp29 Endoplasmic reticulum resident protein 29 yes yes 0 0 0 0 10 1 1 1 60.963 60.963 2;3 0.017201 18291 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.757 23.622 0 147.1 47.458 101.65 0 0 0 139 46 93 0 0 0 2 1 1 0 0 35693 22250 1649 21414 51657;51658 59886;59887 59886 2 WAVISGATDGIGK Unmodified 1273.6667 0.6666512 273 Q8BTX9;A0A1D5RLG0;A0A1D5RM62 Hsdl1 Inactive hydroxysteroid dehydrogenase-like protein 1 yes no 0 0 0 0 9 0 1 71.375 71.375 3 0.00010828 23287 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 76.165 46.817 0 48.944 0 40.441 0 59.696 0 46 0 37 0 56 0 1 0 1 0 1 6739.1 22251 273 21415 51659 59888 59888 1 WCEYGLTFTEK Unmodified 1432.6333 0.63330216 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 9.25 2.28 1 1 1 1 74.088 74.088 2;3 9.0189E-09 25913 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.22 85.432 406.37 138.87 112.18 118.42 106.51 259.2 380 153 111 115 106 246 4 3 1 2 2 4 43601 22252 2096 21416 51660;51661;51662;51663 59889;59890;59891;59892;59893 59889 5 WCTDVFDK Unmodified 1069.4539 0.45388123 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 13 0 1 69.011 69.011 2 0.0088982 25550 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 101.64 52.847 118.19 0 154.21 119.62 124.82 164.87 111 0 148 120 130 158 1 0 1 1 1 1 13307 22253 2585 21417 51664 59894 59894 1 WDAPDDELDNDNSSAR Unmodified 1818.7293 0.72926405 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 1.5 0.5 1 1 56.095 56.095 3 9.1725E-12 18988 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.66 109.39 69.444 24.613 29.722 0 57.241 38.875 65 28 28 0 56 38 2 2 1 0 2 2 7647 22254 893 21418 51665;51666 59895;59896 59896 2 WDAWNALGSLPK Unmodified 1356.6826 0.68263561 821 E9PYC6;E9Q858;E9PUY9;E9PYA9;E9PVM6;Q3TCD4;Q9WUR2;E9Q7A8 Eci2 Enoyl-CoA delta isomerase 2, mitochondrial yes no 0 0 0 0 10 0.816 1 1 1 84.8 84.8 3 0.0016694 29467 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.04 35.985 29.923 19.914 57.455 29.528 0 0 28 19 57 28 0 0 1 1 3 1 0 0 12257 22255 821 21419 51667;51668;51669 59897;59898;59899 59897 3 WDCVSSILQVGGTIIGSAR Unmodified 2018.0255 0.025509829 2507 Q8C605;Q9WUA3;D3YUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 8 4.97 1 1 1 98.231 98.231 3 1.1985E-19 27892 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 128.79 103.47 36.279 16.929 58.41 24.751 24.726 57.924 34 18 57 24 24 55 4 2 5 2 2 5 45468 22256 2507 21420 51670;51671;51672 59900;59901;59902;59903;59904;59905 59904 6 WDDDSTIVTPIILR Unmodified 1642.8566 0.85663681 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 6.5 0.5 1 1 83.667 83.667 2;3 0.00013699 31103 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 101.71 59.711 0 29.792 0 0 0 20.254 0 28 0 0 0 19 0 1 0 0 0 1 3178.8 22257 3373 21421 51673;51674 59906;59907 59906 2 WDDPYYDIAR Unmodified 1312.5724 0.57241646 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 13 0 1 67.437 67.437 2 0.0043261 24777 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.889 34.167 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22258 2047 21422 51675 59908 59908 1 WDELETTTQAK Unmodified 1320.6198 0.61976058 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 4.5 0.5 1 1 62.357 62.357 3 2.8764E-06 21792 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.79 74.59 69.463 0 47.337 46.807 34.536 58.711 65 0 46 46 37 56 1 0 1 1 1 1 9381 22259 2186 21423 51676;51677 59909;59910 59910 2 WDGKDLEDLQILIK Unmodified 1684.9036 0.903587 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 1 8 0 1 85.018 85.018 4 0.0065588 30417 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 49.31 14.697 40.686 17.473 0 30.604 0 0 38 19 0 28 0 0 1 1 0 1 0 0 1521.1 22260 2843 21424 51678 59911 59911 1 WDGVPFILR Unmodified 1101.5971 0.59711507 1869 Q00612;A3KG36;G3UWD6;P97324 G6pdx;G6pd2 Glucose-6-phosphate 1-dehydrogenase X;Glucose-6-phosphate 1-dehydrogenase;Glucose-6-phosphate 1-dehydrogenase 2 yes no 0 0 0 0 9 0 1 82.292 82.292 2 0.028192 28381 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.8 29.188 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22261 1869 21425 51679 59912 59912 1 WDLDACSQTFLEK Unmodified 1611.7239 0.72390808 3409 yes no 0 0 0 0 5 0 1 63.867 63.867 3 0.052049 22516 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 34.179 0.49342 44.338 49.937 80.025 50.14 44.319 43.507 42 51 79 51 46 42 1 1 1 1 1 1 4459.6 + 22262 3409 21426 51680 59913 59913 1 WDLIKPLLK Unmodified 1124.6958 0.69576648 545 F6QYT9;A2CG49;A0A0A0MQF1;B1B1A7 Kalrn Kalirin yes no 0 0 0 1 12 0 1 84.834 84.834 3 0.026085 23763 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 57.598 32.744 0 48.16 46.882 0 47.137 28.503 0 46 46 0 46 28 0 1 1 0 1 1 2777.5 22263 545 21427 51681 59914 59914 1 WDLPDSDWDNDSSSAR Unmodified 1864.75 0.74999949 2186 Q68FG2 Sptbn2 yes yes 0 0 0 0 3.5 0.5 1 1 70.581 70.581 2;3 6.6538E-62 25571 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 166.45 143.73 0 0 0 29.907 37.035 8.5372 0 0 0 28 37 9 0 0 0 1 1 1 2753.2 22264 2186 21428 51682;51683 59915;59916 59916 2 WDLSAQQIR Unmodified 1115.5724 0.57235688 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 8 0 1 59.421 59.421 2 0.053409 18377 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 55.235 16.459 48.898 0 77.345 55.588 53.695 67.758 46 0 74 56 56 65 1 0 1 1 1 1 3532.1 22265 145 21429 51684 59917 59917 1 WDQSTFLGR Unmodified 1108.5302 0.53015772 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 8.6 2.24 2 2 1 64.68 64.68 2 0.0013993 23249 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.55 0 177.19 184.89 70.33 71.045 67.99 108.73 166 185 65 65 65 102 2 2 1 1 1 1 45313 22266 2730 21430 51685;51686;51687;51688;51689 59918;59919;59920;59921;59922 59922 5 WDSYDLTIK Unmodified 1139.5499 0.5498901 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 7 0 1 72.282 72.282 2 0.057188 24938 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.436 18.61 69.745 0 0 50.278 0 59.696 65 0 0 46 0 56 1 0 0 1 0 1 5257 22267 1018;2532 21431 51690 59923 59923 1 WDTCAPEVILHAVGGK Unmodified 1751.8665 0.86648999 255;3362 A0A1B0GRV0;Q9Z0S1;D3Z0E6 Bpnt1 3'(2'),5'-bisphosphate nucleotidase 1 no no 0 0 0 0 10.5 2.5 1 1 78.676 78.676 3 6.719E-13 27562 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.444 67.866 39.25 45.677 37.096 0 58.576 0 37 46 37 0 56 0 1 1 1 0 1 0 4772.9 22268 255;3362 21432 51691;51692 59924;59925 59924 2 WDVDDWDNENSSAR Unmodified 1707.6761 0.67610626 2148 Q62261;A0A0A0MQG2 Sptbn1 Spectrin beta chain, non-erythrocytic 1 yes no 0 0 0 0 6.67 4.5 1 1 1 65.716 65.716 3 3.1638E-12 23937 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 124.51 112.6 187.39 143.85 122.8 37.566 36.976 0 176 149 120 37 37 0 3 3 2 1 1 0 35339 22269 2148 21433 51693;51694;51695 59926;59927;59928 59926 3 WDVLIQQATQCLNR Unmodified 1743.8726 0.872638 2698 Q8VDM6 Hnrnpul1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 yes yes 0 0 0 0 11 0 1 88.53 88.53 3 0.043385 28244 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 34.33 13.377 0 48.944 0 20.767 0 39.442 0 46 0 19 0 37 0 1 0 1 0 1 3369.9 22270 2698 21434 51696 59929 59929 1 WDYLTQVEK Unmodified 1180.5764 0.57643921 2990 Q9CXW3 Cacybp Calcyclin-binding protein yes yes 0 0 0 0 8 0.816 1 1 1 72.109 72.109 2;3 0.0011978 24177 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.338 61.576 138.28 127.41 95.085 79.202 160.64 28.796 130 130 93 75 158 28 3 3 2 2 3 1 19011 22271 2990 21435 51697;51698;51699 59930;59931;59932 59931 3 WEEAIPLALK Unmodified 1168.6492 0.64921022 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 7.67 0.471 1 2 81.314 81.314 2;3 0.00045903 28652 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.331 51.17 69.413 18.848 70.082 20.411 47.557 19.437 65 19 65 19 47 19 2 1 2 1 2 1 14248 22272 1446 21436 51700;51701;51702 59933;59934;59935 59935 3 WEFIPSK Unmodified 905.4647 0.46470391 1596 P50516;D3Z1B9;D3YWH3 Atp6v1a V-type proton ATPase catalytic subunit A yes no 0 0 0 0 9 0.707 1 2 1 71.105 71.105 2;3 0.0095133 23867 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 124.08 39.015 1516.6 2200.9 2529.4 2873.7 2900 2600.1 1432 2194 2532 2817 2984 2499 4 5 4 6 6 4 306760 22273 1596 21437 51703;51704;51705;51706 59936;59937;59938;59939;59940;59941 59936 6 WEGGDPGVSNQK Unmodified 1272.5735 0.57347909 2585 Q8K0U4 Hspa12a Heat shock 70 kDa protein 12A yes yes 0 0 0 0 7.25 3.34 2 1 1 49.122 49.122 2;3 6.8674E-05 15654 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.573 59.614 247.09 63.151 256.05 136.57 213.35 222.04 232 65 245 130 213 214 4 1 2 2 3 3 22471 22274 2585 21438 51707;51708;51709;51710 59942;59943;59944;59945 59943 4 WETPSQNTAQLDQFDR Unmodified 1934.8759 0.8758687 1310 P05132 Prkaca cAMP-dependent protein kinase catalytic subunit alpha yes yes 0 0 0 0 4 0 1 63.924 63.924 3 0.032111 22734 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 35.348 25.39 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22275 1310 21439 51711 59946 59946 1 WEVLIGSTHILTPQK Unmodified 1720.9512 0.9512059 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 10.3 0.471 2 1 78.008 78.008 3;4 3.0542E-11 24049 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.84 95.28 295.12 390.26 287.36 291.08 349.39 341.92 278 390 287 286 351 324 4 5 3 4 4 3 111640 22276 1160 21440 51712;51713;51714 59947;59948;59949;59950;59951 59947 5 WFATTDWIAIYQR Unmodified 1669.8253 0.8252771 1310;1793 P05132;P68181 Prkaca;Prkacb cAMP-dependent protein kinase catalytic subunit alpha;cAMP-dependent protein kinase catalytic subunit beta no no 0 0 0 0 11.5 0.5 1 1 90.553 90.553 2;3 3.0823E-14 25800 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 110.53 72.812 0 0 0 0 20.208 20.743 0 0 0 0 20 20 0 0 0 0 1 1 7805.4 22277 1310;1793 21441 51715;51716 59952;59953 59953 2 WFDFPFTR Unmodified 1114.5236 0.52361577 496 A2AN08;F6SSP6 Ubr4 E3 ubiquitin-protein ligase UBR4 yes no 0 0 0 0 11 0 1 87.276 87.276 2 0.035267 27778 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.628 43.519 41.847 0 0 27.325 0 52.234 39 0 0 25 0 49 1 0 0 1 0 1 3389.7 22278 496 21442 51717 59954 59954 1 WFGFLEAQQAFR Unmodified 1498.7357 0.73573382 2536 Q8CGC7 Eprs Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase yes yes 0 0 0 0 11 0.816 1 1 1 88.45 88.45 2;3 0.00018692 28207 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.744 61.491 0 19 0 39.767 0 9.594 0 19 0 38 0 9 0 1 0 2 0 1 6583.3 22279 2536 21443 51718;51719;51720 59955;59956;59957 59956 3 WFHGHLSGK Unmodified 1067.5301 0.53009814 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 10 0 1 45.539 45.539 4 0.01663 9986 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.04 24.654 0 77.638 65.672 0 65.345 77.019 0 74 65 0 65 74 0 1 1 0 1 1 2898.7 22280 1512 21444 51721 59958 59958 1 WFHPNITGVEAENLLLTR Unmodified 2109.1007 0.10072368 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 8.5 0.5 1 1 79.53 79.53 3 2.552E-05 27148 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.777 38.144 29.856 37.355 0 0 29.288 0 28 37 0 0 28 0 1 1 0 0 1 0 5641.8 22281 1512 21445 51722;51723 59959;59960 59960 2 WFIPNTLK Unmodified 1017.5648 0.56475231 358 E9PWG2;A0A286YCX6;E9PY51 Trappc8 yes no 0 0 0 0 1 0 1 77.81 77.81 2 0.034782 27145 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 69.825 28.376 29.869 0 29.355 17.754 67.174 0 28 0 28 19 65 0 1 0 1 1 1 0 2430.4 22282 358 21446 51724 59961 59961 1 WFKDGQELHPLETTVNPSGK Unmodified 2282.1331 0.13314602 2224 Q6P6I8;E0CYM8 Sirpa yes no 0 0 0 1 8 0 1 65.862 65.862 4 0.053582 21340 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 31.138 12.093 0 28.319 88.107 0 58.576 0 0 28 83 0 56 0 0 1 1 0 1 0 5430.6 22283 2224 21447 51725 59962 59962 1 WFLAVPLVSLGFK Unmodified 1475.8541 0.85405804 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 13 0 1 108.16 108.16 3 0.0031321 43957 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 51.774 28.398 0 0 0 30.364 12.749 14.56 0 0 0 28 14 14 0 0 0 1 1 1 1144.4 22284 141 21448 51726 59963 59963 1 WFLTCINQPQFR Unmodified 1608.7871 0.78711746 3094 Q9D8N0 Eef1g Elongation factor 1-gamma yes yes 0 0 0 0 3.75 4.76 3 1 81.99 81.99 2;3 1.3821E-27 28446 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 176.95 135.55 188.91 140.11 247.44 247.98 227.52 136.25 177 139 243 240 229 131 7 4 7 7 7 5 60831 22285 3094 21449 51727;51728;51729;51730 59964;59965;59966;59967;59968;59969;59970;59971;59972;59973 59965 10 WFSIQNNQLVYQK Unmodified 1666.8467 0.84674083 409 D4AFX6;A0A338P6P6;Q6ZQK5 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 0 0 0 11 0 1 77.054 77.054 3 8.6539E-05 23169 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.362 44.394 79.402 0 0 0 64.649 97.293 74 0 0 0 65 93 1 0 0 0 1 1 6764.4 22286 409 21450 51731 59974 59974 1 WFSIQNNQLVYQK Deamidation (N) 1667.8308 0.83075641 409 D4AFX6;A0A338P6P6;Q6ZQK5 Acap2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 yes no 0 1 0 0 12 0 1 76.931 76.931 3 0.00024105 20643 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 80.245 57.366 49.063 0 49.525 0 46.111 58.38 46 0 46 0 46 56 1 0 1 0 1 1 2263.5 22287 409 21450 51732 59975 59975 107 1 WFTDTSIILFLNK Unmodified 1596.8552 0.85518025 1330;622;3136 B2RSH2;P08752;Q9DC51 Gnai1;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 0 11.8 0.829 2 1 1 102.49 102.49 3 1.3713E-14 33907 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.76 87.406 6.3919 52.617 0 93.189 96.803 55.178 6 51 0 87 97 52 1 4 0 5 3 3 13789 22288 622;1330;3136 21451 51733;51734;51735;51736 59976;59977;59978;59979;59980;59981;59982;59983;59984 59976 9 WFTDTSIILFLNKK Unmodified 1724.9501 0.95014327 1330;622;3136 B2RSH2;P08752;Q9DC51 Gnai1;Gnai2;Gnai3 Guanine nucleotide-binding protein G(i) subunit alpha-1;Guanine nucleotide-binding protein G(i) subunit alpha-2;Guanine nucleotide-binding protein G(k) subunit alpha no no 0 0 0 1 12 0 1 92.583 92.583 3 0.016099 26504 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 46.746 36.407 0 0 24.886 0 29.288 0 0 0 23 0 28 0 0 0 1 0 1 0 1430.2 22289 622;1330;3136 21452 51737 59985 59985 1 WFTSQVIR Unmodified 1035.5502 0.55016488 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 11 0 1 65.629 65.629 2 0.003083 17983 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 125.01 82.898 0 0 0 0 237 0 0 0 0 0 237 0 0 0 0 0 1 0 45229 22290 3204 21453 51738 59986 59986 1 WFYIDFGGLKPSGSEPTPK Unmodified 2125.052 0.052042156 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 1 12 0.816 1 1 1 82.939 82.939 3;4 3.5298E-08 32237 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.603 57.957 297.03 98.505 129.09 110.3 128.92 125.31 278 102 120 102 130 121 3 2 1 2 2 2 33201 22291 2396 21454 51739;51740;51741 59987;59988;59989 59989 3 WGDIEFPPPFGR Unmodified 1416.6826 0.68263561 2020 Q91V92;Q3V117;Q3TS02 Acly ATP-citrate synthase yes no 0 0 0 0 8 0 1 86.767 86.767 3 0.015821 31280 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.68 19.693 0 19.892 19.365 0 0 9.594 0 19 19 0 0 9 0 1 1 0 0 1 1431.2 22292 2020 21455 51742 59990 59990 1 WGDPVTR Unmodified 829.40825 0.40825167 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 8.67 3.09 1 1 1 47.331 47.331 2 0.026934 14845 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 89.123 34.512 819.74 628.48 915.06 743.79 499.57 559.25 772 657 915 739 517 538 3 3 3 3 2 2 149320 22293 1554 21456 51743;51744;51745 59991;59992;59993 59993 3 WGEAGAEYVVESTGVFTTMEK Unmodified 2290.0464 0.04636443 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 0 0 8.7 3.55 2 4 12 6 2 1 1 2 1 15 95.047 95.047 3;4 8.4636E-26 40168 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.963 83.278 651.2 493.6 702.88 330.56 666.92 605.29 612 504 687 331 662 584 20 18 20 16 19 16 198870 22294 1395;3448 21457 51746;51747;51748;51749;51750;51751;51752;51753;51754;51755;51756;51757;51758;51759;51760;51761;51762;51763;51764;51765;51766;51767;51768;51769;51770;51771;51772;51773;51774;51775;51776;51777;51778;51779;51780;51781;51782;51783;51784;51785;51786;51787;51788;51789;51790;51791 59994;59995;59996;59997;59998;59999;60000;60001;60002;60003;60004;60005;60006;60007;60008;60009;60010;60011;60012;60013;60014;60015;60016;60017;60018;60019;60020;60021;60022;60023;60024;60025;60026;60027;60028;60029;60030;60031;60032;60033;60034;60035;60036;60037;60038;60039;60040;60041;60042;60043;60044;60045;60046;60047;60048 60015 55 WGEAGAEYVVESTGVFTTMEK Oxidation (M) 2306.0413 0.041279052 1395;3448 P16858;A0A0A0MQF6;A0A1D5RLD8;S4R257;S4R1W1 Gapdh;Gm3839 Glyceraldehyde-3-phosphate dehydrogenase no no 0 0 1 0 6 0 1 83.233 83.233 3 0.00038745 30998 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.672 36.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22295 1395;3448 21457 51792 60049 60049 92 1 WGFITVGYR Unmodified 1097.5658 0.56581494 2043 Q5DTY9 Kctd16 BTB/POZ domain-containing protein KCTD16 yes yes 0 0 0 0 1 0 1 75.217 75.217 2 0.018167 25909 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 64.567 47.791 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22296 2043 21458 51793 60050 60050 1 WGGSSFQDIQR Unmodified 1279.5945 0.59454889 3210 Q9JIA1;A0A0G2JGE8;A0A0G2JGB7 Lgi1 Leucine-rich glioma-inactivated protein 1 yes no 0 0 0 0 9.33 2.62 1 1 1 56.946 56.946 2 1.8387E-07 17201 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 107.24 80.129 59.91 113.2 42.811 146.81 136.34 67.248 56 112 46 139 139 65 1 3 1 2 2 1 20633 22297 3210 21459 51794;51795;51796 60051;60052;60053 60052 3 WGLHVFR Unmodified 913.49226 0.49225607 559 A6XDB1;A6XDB0;B1PSD9;B2KF57;B2KF84;F6QFD1;E9PVU7;Q01063;F6YIS2 Pde4d cAMP-specific 3',5'-cyclic phosphodiesterase 4D yes no 0 0 0 0 12 0 1 56.837 56.837 3 0.0053281 12934 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 91.584 34.303 30.044 0 0 0 0 49.036 28 0 0 0 0 46 1 0 0 0 0 1 4099.5 22298 559 21460 51797 60054 60054 1 WGQIILK Unmodified 856.51707 0.51707383 2686 Q8VCT3;E9PYF1 Rnpep Aminopeptidase B yes no 0 0 0 0 11.5 0.5 1 1 71.3 71.3 2 0.027535 20594 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.62 14.073 54.42 60.171 266.38 231.03 180.18 276.28 51 60 253 229 186 264 1 1 1 2 1 2 34584 22299 2686 21461 51798;51799 60055;60056 60055 2 WGSLTEGK Unmodified 876.43413 0.43413207 1894 Q0KL02 Trio Triple functional domain protein yes yes 0 0 0 0 7 0 1 54.237 54.237 3 0.017977 16447 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 55.676 2.96 0 29.792 0 0 0 49.036 0 28 0 0 0 46 0 1 0 0 0 1 3244.7 22300 1894 21462 51800 60057 60057 1 WGTDEAQFIYILGNR Unmodified 1781.8737 0.87368386 1050;1380 F8WIT2;P14824 Anxa6 Annexin;Annexin A6 no no 0 0 0 0 9.25 2.28 1 1 1 1 86.964 86.964 3 3.7038E-08 34148 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.74 74.018 80.109 27.808 37.927 26.577 9.414 69.29 75 28 37 28 9 65 3 1 1 2 1 1 15484 22301 1050;1380 21463 51801;51802;51803;51804 60058;60059;60060;60061 60061 4 WGTLTDCVVMR Unmodified 1336.6268 0.62677699 486;626 B2RXM2;J3QNY1;A2AL12;Q8BG05 Gm6793;Gm9242;Hnrnpa3 Heterogeneous nuclear ribonucleoprotein A3 no no 0 0 0 0 8.5 0.5 1 1 69.855 69.855 2 0.0010717 22554 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.029 59.362 168.84 85.779 43.311 78.301 0 39.442 158 92 46 74 0 37 2 2 1 1 0 1 14169 22302 626;486 21464 51805;51806 60062;60063 60063 2 WGYSSTAIVR Unmodified 1138.5771 0.57710791 1821 P70699;F6VEG4;A2AFL5 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 9 0 1 57.018 57.018 2 0.0023863 16502 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.136 71.6 48.447 54.531 106.85 0 106.69 0 46 56 102 0 102 0 1 1 1 0 1 0 4792.5 22303 1821 21465 51807 60064 60064 1 WHEAADTK Unmodified 956.43519 0.4351947 2212;1850 P97427;A0A0J9YTX5;A0A0J9YUZ1;Q6P1J1 Crmp1 Dihydropyrimidinase-related protein 1 no no 0 0 0 0 8.67 3.09 1 1 1 37.163 37.163 3 0.00035234 9448 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.22 114.2 508.34 173.79 618.28 305.37 719.7 564.7 478 182 596 308 720 549 3 1 3 2 3 3 64896 22304 1850;2212 21466 51808;51809;51810 60065;60066;60067 60065 3 WHELLAQK Unmodified 1023.5502 0.55016488 3342 Q9WV54;D3Z505 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes no 0 0 0 0 8.5 0.5 1 1 56.301 56.301 3 0.0032519 16139 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.548 50.978 0 115.47 157.68 142.53 0 118.33 0 111 158 139 0 111 0 1 1 1 0 1 10134 22305 3342 21467 51811;51812 60068;60069 60069 2 WHFYDTVK Unmodified 1094.5185 0.5185304 2597 Q8K2B3;A0A1Y7VJ55 Sdha Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial yes no 0 0 0 0 10.7 1.7 1 1 1 58.551 58.551 2;3 0.0029321 20170 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 84.498 43.334 336 281.09 97.212 251.49 267.97 367.59 315 287 102 240 278 352 3 3 1 2 2 3 34884 22306 2597 21468 51813;51814;51815 60070;60071;60072 60072 3 WHTQDLSFLSSSADR Unmodified 1748.8118 0.81181188 2537 Q8CGF6 Wdr47 WD repeat-containing protein 47 yes yes 0 0 0 0 7 0 1 63.887 63.887 3 0.0011792 21015 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.323 32.484 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22307 2537 21469 51816 60073 60073 1 WIAQDLSNLR Unmodified 1214.6408 0.6407708 3113 Q9DB60;B1AS14 Fam213b Prostamide/prostaglandin F synthase yes no 0 0 0 0 8 0 1 71.575 71.575 2 0.0049188 24004 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.85 25.583 69.235 0 85.729 83.675 102.85 0 65 0 83 83 102 0 1 0 1 1 1 0 6060.3 22308 3113 21470 51817 60074 60074 1 WIDETPPVDQPSR Unmodified 1538.7365 0.73652168 1654 P58389 Ppp2r4 Serine/threonine-protein phosphatase 2A activator yes yes 0 0 0 0 4.5 0.5 1 1 60.096 60.096 2;3 3.581E-13 20836 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 125.74 98.433 0 50.008 0 30.604 37.714 28.772 0 47 0 28 37 28 0 2 0 1 1 1 14565 22309 1654 21471 51818;51819 60075;60076;60077 60077 3 WIFVGGK Unmodified 805.44866 0.44865992 1224 O54984;A0A1B0GRE1 Asna1 ATPase Asna1 yes no 0 0 0 0 6.5 5.5 1 1 72.579 72.579 2 0.0086474 24748 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.05 55.778 178.46 492.83 668.31 198.75 188.7 239.8 168 485 654 195 197 230 1 2 2 1 1 1 85652 22310 1224 21472 51820;51821 60078;60079 60078 2 WIGLDLVHGK Unmodified 1136.6342 0.63422886 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 9.5 0.5 1 1 70.633 70.633 3 0.001474 20808 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 70.17 32.448 0 77.524 72.512 65.196 81.194 76.567 0 74 74 65 83 74 0 1 1 1 1 1 8565.5 22311 1356 21473 51822;51823 60080;60081 60081 2 WIGLDLVHGKPR Unmodified 1389.7881 0.78810374 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 1 11.4 1.02 1 2 1 1 62.322 62.322 3;4 2.511E-05 15028 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.791 67.049 374.78 372.98 413.1 404.53 232.23 224.01 352 371 407 389 231 213 5 4 4 4 2 2 120560 22312 1356 21474 51824;51825;51826;51827;51828 60082;60083;60084;60085;60086;60087 60086 6 WIGSETDLEPPVVK Unmodified 1568.8086 0.80862399 3131 Q9DBR7 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes yes 0 0 0 0 6 0 1 75.349 75.349 3 0.0052203 27320 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.14 31.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22313 3131 21475 51829 60088 60088 1 WIHPASGR Unmodified 922.47733 0.47733428 3321 Q9WTP7;F6RP11 Ak3 GTP:AMP phosphotransferase AK3, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 36.975 36.975 3 0.0075189 7469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.383 49.652 68.652 189.04 189.47 220.6 48.976 195.81 65 185 195 213 56 185 1 2 2 2 1 2 17419 22314 3321 21476 51830;51831 60089;60090 60089 2 WILENDPTELDLR Unmodified 1612.8097 0.80968662 1559 P46935 Nedd4 E3 ubiquitin-protein ligase NEDD4 yes yes 0 0 0 0 6 0 1 81.135 81.135 3 0.041558 29982 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.572 17.514 20.121 18.373 29.092 0 0 20.254 19 19 28 0 0 19 1 1 1 0 0 1 2281.2 22315 1559 21477 51832 60091 60091 1 WIQGLQETNPTLAQIPVVFR Unmodified 2309.2532 0.25320158 199 A0A0R4J174;Q9QZH6 Ecsit Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 0 0 0 9 0 1 91.836 91.836 3 0.004726 32568 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.999 28.469 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22316 199 21478 51833 60092 60092 1 WIQGLQETNPTLAQIPVVFR Deamidation (N) 2310.2372 0.23721716 199 A0A0R4J174;Q9QZH6 Ecsit Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial yes no 0 1 0 0 10 0 1 91.811 91.811 3 6.6674E-08 29879 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.11 56.425 0 9.576 0 0 0 6.396 0 9 0 0 0 6 0 1 0 0 0 1 1822.3 22317 199 21478 51834 60093 60093 68 1 WIVPGGGMEPEEEPSVAAVR Unmodified 2109.0201 0.0200901 1132 I1E4X7;Q9JI46;H3BLR8;B2KF67;A0A338P6T6;A0A338P7L3;H3BJY4 Nudt3 Diphosphoinositol polyphosphate phosphohydrolase 1 yes no 0 0 0 0 9.5 3.5 1 1 73.898 73.898 3 0.00012091 26725 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.348 33.859 89.666 0 78.361 28.179 37.408 69.29 84 0 74 28 37 65 2 0 2 1 1 1 11416 22318 1132 21479 51835;51836 60094;60095 60094 2 WKDSDEADLVLAK Unmodified 1488.746 0.74602373 3141 Q9DCC5;P23198 Cbx3 Chromobox protein homolog 3 yes no 0 0 0 1 6.5 0.5 1 1 67.037 67.037 3 0.00025103 22442 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 92.935 73.096 158.16 127.66 0 129.13 166.13 76.261 148 130 0 121 167 74 2 2 0 2 2 1 10514 22319 3141 21480 51837;51838 60096;60097 60097 2 WKELVDGAPLWLLK Unmodified 1666.9447 0.94466396 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 1 10.7 0.471 1 2 100.95 100.95 3 0.0038019 33135 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 59.294 44.139 0 20.216 0 20.767 0 20.254 0 19 0 19 0 19 0 1 0 1 0 1 1978.3 22320 2319 21481 51839;51840;51841 60098;60099;60100 60100 3 WKNPITSVDAAFR Unmodified 1503.7834 0.78341229 2762 Q91X72 Hpx Hemopexin yes yes 0 0 0 1 10 0 1 68.428 68.428 3 0.0073418 19737 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.491 27.361 0 67.209 116.68 204.97 64.647 97.293 0 65 120 195 74 93 0 1 1 1 1 1 9437.7 22321 2762 21482 51842 60101 60101 1 WKPDYDSAASEYGK Unmodified 1615.7155 0.71545188 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 1 8.17 2.27 1 2 2 1 57.226 57.226 3;4 2.316E-17 18050 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 133.66 111.83 329.2 458.8 726.93 441.76 677.9 682.08 310 454 717 440 682 658 4 5 6 5 5 6 58088 22322 775 21483 51843;51844;51845;51846;51847;51848 60102;60103;60104;60105;60106;60107 60104 6 WKPVGMADLVTPEQVK Unmodified 1796.9495 0.94949134 2306 Q80TZ3 Dnajc6 Putative tyrosine-protein phosphatase auxilin yes yes 0 0 0 1 10 0 1 71.94 71.94 3 1.4445E-05 21471 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.285 45.291 0 0 28.57 38.738 0 29.848 0 0 28 37 0 28 0 0 1 1 0 1 2456.8 22323 2306 21484 51849 60108 60108 1 WKPWEPLVEEPPANQWK Unmodified 2133.0684 0.068360922 2892 Q9CPP6;D3YTQ8 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes no 0 0 0 1 9.43 1.59 2 3 1 1 78.928 78.928 3;4;5 8.2027E-19 29678 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.904 82.312 128.52 400.18 429.4 201.99 121.65 342.98 121 391 426 196 120 325 3 8 7 5 2 5 39431 22324 2892 21485 51850;51851;51852;51853;51854;51855;51856 60109;60110;60111;60112;60113;60114;60115;60116;60117 60117 9 WLAESIR Unmodified 873.47085 0.47085192 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 8 0 1 60.199 60.199 2 0.02534 18739 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 100.74 18.071 0 77.195 92.198 85.224 0 127.92 0 74 93 83 0 120 0 1 1 1 0 1 13797 22325 1608 21486 51857 60118 60118 1 WLAESPVGLPPEEEDKLTR Unmodified 2165.1004 0.10044891 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 1 7.75 3.11 1 1 1 1 72.333 72.333 3 0.0027655 26694 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.337 32.505 139.48 101.97 95.175 68.075 66.269 0 131 103 93 65 65 0 4 3 3 2 2 0 12765 22326 510 21487 51858;51859;51860;51861 60119;60120;60121;60122;60123 60120 5 WLAIDANAR Unmodified 1028.5403 0.54032847 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 8.5 0.5 1 1 63.356 63.356 2 0.0010256 19432 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 106.93 64.091 0 195.64 71.96 193.29 245.72 200.86 0 185 74 185 250 195 0 2 1 2 2 2 26002 22327 1798 21488 51862;51863 60124;60125 60125 2 WLAIPDHSR Unmodified 1093.5669 0.56687757 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 8.5 0.5 1 1 55.043 55.043 3 0.00062275 15406 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 102.07 70.994 0 38.914 27.131 18.634 27.434 29.065 0 37 28 19 28 28 0 1 1 1 1 1 4071.4 22328 1541 21489 51864;51865 60126;60127 60127 2 WLAPDGLIFPDR Unmodified 1398.7296 0.7295858 244 A0A171KXD3;Q9JIF0;A0A140LJF4;A0A140LHF7 Prmt1 Protein arginine N-methyltransferase 1 yes no 0 0 0 0 8 0 1 85.65 85.65 3 0.013515 30662 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.257 19.871 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1404.3 22329 244 21490 51866 60128 60128 1 WLAQLVK Unmodified 856.51707 0.51707383 3238 Q9JKY0 Rqcd1 Cell differentiation protein RCD1 homolog yes yes 0 0 0 0 6.5 5.5 1 1 75.76 75.76 2 0.027264 19896 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.692 16.838 99.065 101.25 35.836 28.468 0 118.33 93 102 37 28 0 111 2 2 1 1 0 2 6521.7 22330 3238 21491 51867;51868 60129;60130 60130 2 WLAVDHENVRPDMVLLGK Unmodified 2091.0935 0.093529815 1489 P29758 Oat Ornithine aminotransferase, mitochondrial yes yes 0 0 0 1 8 0 1 73.151 73.151 4 0.0020633 24712 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 45.618 22.743 0 69.16 0 0 66.005 57.813 0 65 0 0 65 56 0 1 0 0 1 1 26353 22331 1489 21492 51869 60131 60131 1 WLCPLSGK Unmodified 959.48987 0.48987281 2877 Q99MR6;A0A0G2JDF8;A0A0G2JG65 Srrt Serrate RNA effector molecule homolog yes no 0 0 0 0 11 0 1 68.426 68.426 2 0.027289 19355 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.931 14.131 69.472 0 45.941 78.144 0 0 65 0 46 74 0 0 1 0 1 1 0 0 6075.1 22332 2877 21493 51870 60132 60132 1 WLDGFRK Unmodified 920.48684 0.48683634 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 13 0 1 59.267 59.267 3 0.04149 20754 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.915 33.47 148.4 147.47 0 0 140.11 153.77 139 148 0 0 139 148 1 1 0 0 1 1 16140 22333 2919 21494 51871 60133 60133 1 WLEEVSQVAK Unmodified 1187.6186 0.61863837 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 0 7 0 1 73.845 73.845 2 0.046783 25741 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.6 23.903 0 29.336 27.283 28.116 45.844 28.54 0 28 28 28 46 28 0 1 1 1 1 1 2849 22334 1171 21495 51872 60134 60134 1 WLFGELPLNYFAR Unmodified 1624.8402 0.84019889 2006 Q3UUG6;Q8BRB6;A0A0J9YV32 Tbc1d24 TBC1 domain family member 24 yes no 0 0 0 0 12 0 1 99.694 99.694 3 0.055194 28364 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 33.751 5.0431 0 9.4227 9.1727 0 0 9.594 0 9 9 0 0 9 0 1 1 0 0 1 1646.9 22335 2006 21496 51873 60135 60135 1 WLHEINQNCDDVCR Unmodified 1857.7887 0.78865038 2250 Q6PHN9 Rab35 Ras-related protein Rab-35 yes yes 0 0 0 0 6 0 1 52.55 52.55 3 0.00012522 16588 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.26 61.71 48.71 64.975 53.864 57.998 0 0 46 65 56 56 0 0 1 1 1 1 0 0 4387.4 22336 2250 21497 51874 60136 60136 1 WLHNEDQMAVEK Deamidation (N) 1499.6715 0.67147858 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 1 0 0 5 0 1 55.051 55.051 3 0.015313 18368 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.135 30.182 0 29.031 45.534 56.031 72.851 57.617 0 28 46 55 74 56 0 1 1 1 1 1 3050.6 22337 246 21498 51875 60137 60137 79 1 WLHNEDQMAVEK Unmodified 1498.6875 0.68746299 246 A0A1B0GR11;Q93092 Taldo1 Transaldolase yes no 0 0 0 0 6 0 1 54.607 54.607 3 0.00018164 17574 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 78.705 56.473 0 48.16 46.882 0 86.818 0 0 46 46 0 83 0 0 1 1 0 1 0 4666.3 22338 246 21498 51876 60138 60138 1 WLISAAVRR Unmodified 1070.6349 0.63489756 3421 yes yes 0 0 0 1 10 0 1 68.136 68.136 3 0.0065949 19596 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 71.692 17.917 0 0 0 20.411 18.936 0 0 0 0 19 19 0 0 0 0 1 1 0 5365.5 + 22339 3421 21499 51877 60139 60139 1 WLITLNK Unmodified 886.52764 0.52763852 97 A0A0G2JFB4;A0A0G2JH04;P63073;A0A0G2JGT5 Eif4e Eukaryotic translation initiation factor 4E yes no 0 0 0 0 8.67 5.44 1 1 1 76.019 76.019 2 0.0053654 26457 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 134.66 73.875 176.91 173.93 309.95 275.43 160.5 257.46 166 167 297 269 158 242 3 3 4 5 3 3 53557 22340 97 21500 51878;51879;51880 60140;60141;60142;60143;60144;60145 60141 6 WLLDFASK Unmodified 978.51747 0.51746776 735 D3Z041;P41216 Acsl1 Long-chain-fatty-acid--CoA ligase 1 yes no 0 0 0 0 10 0 1 85.343 85.343 2 0.054821 27286 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 61.679 16.597 0 0 0 30.604 0 49.036 0 0 0 28 0 46 0 0 0 1 0 1 2343.3 22341 735 21501 51881 60146 60146 1 WLLDGIGSGK Unmodified 1044.5604 0.56039521 176 Q3UVT7;A0A0R4J0J0;Q9JHU2;D3Z486 Palmd Palmdelphin yes no 0 0 0 0 10 0 1 77.226 77.226 2 0.0040664 23710 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.148 36.753 39.516 36.703 0 29.558 55.589 47.45 37 37 0 28 56 46 1 1 0 1 1 1 2251.3 22342 176 21502 51882 60147 60147 1 WLLDNVK Unmodified 886.49125 0.49125301 583 B1ASZ3;Q64516 Gyk;Gk Glycerol kinase yes no 0 0 0 0 10 0 1 72.095 72.095 2 0.02751 21553 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.352 17.678 118 78.357 119.52 112.75 76.955 136.38 111 83 120 111 83 130 1 1 1 1 1 1 6629.3 22343 583 21503 51883 60148 60148 1 WLLEFAAK Unmodified 976.5382 0.53820321 2753 Q91WC3;Q5ICG5;Q8R1X1;Q5F2C5;Q8BYJ0;E9Q7Y2 Acsl6 Long-chain-fatty-acid--CoA ligase 6 yes no 0 0 0 0 11.3 0.471 2 1 84.847 84.847 2;3 0.009133 26607 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.038 38.436 0 87.584 60.592 88.686 156.19 115.24 0 84 56 83 157 111 0 2 1 1 2 1 17663 22344 2753 21504 51884;51885;51886 60149;60150;60151 60150 3 WLLLCNPGLADLIAEK Unmodified 1824.9808 0.98079147 1969 Q3UEJ6;Q9ET01 Pygl Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form yes no 0 0 0 0 12 0 1 99.83 99.83 3 0.0051417 28430 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.818 25.329 0 0 0 9.837 0 6.396 0 0 0 9 0 6 0 0 0 1 0 1 633.52 22345 1969 21505 51887 60152 60152 1 WLLLCNPGLAEIIVER Unmodified 1895.0339 0.033889671 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 11 0.816 1 1 1 97.997 97.997 2;3 8.668E-08 32072 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.38 82.735 12.876 18.765 23.14 64.039 0 12.792 12 18 23 63 0 12 1 2 2 4 0 1 33331 22346 2555 21506 51888;51889;51890 60153;60154;60155;60156;60157 60154 5 WLLLTGISAQQNR Deamidation (N) 1499.8096 0.80962704 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 1 0 0 4.67 5.19 2 1 84.29 84.29 2;3 0.0036575 28874 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.13 38.177 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2153.2 22347 2185 21507 51891;51892;51893 60158;60159;60160 60159 876 3 WLLLTGISAQQNR Unmodified 1498.8256 0.82561145 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 13 0 2 80.574 80.574 2;3 3.6858E-05 31233 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 98.407 75.528 108.99 78.217 170.85 153.56 158.52 57.82 102 75 167 148 157 56 1 2 3 3 3 2 86112 22348 2185 21507 51894;51895 60161;60162;60163;60164 60162 4 WLLNEFPNFIPTDGR Unmodified 1817.9101 0.91006937 2124 Q61330 Cntn2 Contactin-2 yes yes 0 0 0 0 9.5 0.5 1 1 95.542 95.542 3 0.00040321 31173 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.52 25.515 14.879 19.081 7.8573 14.834 0 9.594 14 19 9 14 0 9 1 1 1 1 0 1 5520.7 22349 2124 21508 51896;51897 60165;60166 60166 2 WLLNEFPVFITMDK Unmodified 1751.8957 0.89566485 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 11.5 1.12 1 1 1 1 104.72 104.72 2;3 1.842E-07 33518 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.12 83.78 34.336 5.32 16 33.139 0 58.63 32 5 16 31 0 55 1 1 1 2 0 2 22477 22350 1362 21509 51898;51899;51900;51901 60167;60168;60169;60170;60171 60167 5 WLMDGTVLCK Unmodified 1221.5886 0.58860057 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 10.7 1.7 1 1 1 77.724 77.724 2;3 5.5582E-05 23963 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.88 68.018 60.088 136.88 86.318 158.37 287.34 193.12 56 130 83 148 288 186 1 2 1 2 3 2 24578 22351 3315 21510 51902;51903;51904 60172;60173;60174 60173 3 WLNENAVEK Unmodified 1101.5455 0.54547343 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 7 0.816 1 1 1 59.753 59.753 3 0.0025923 19173 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 71.349 30.772 78.659 44.864 86.918 39.747 36.876 49.036 74 46 83 37 37 46 2 1 1 1 1 1 8095.1 22352 1594 21511 51905;51906;51907 60175;60176;60177 60176 3 WLNSPNTYMK Unmodified 1252.591 0.59104341 3274 Q9QYB5 Add3 Gamma-adducin yes yes 0 0 0 0 11 0 1 65.504 65.504 3 0.010586 17976 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 54.259 39.321 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22353 3274 21512 51908 60178 60178 1 WLNTPNTYLR Unmodified 1276.6564 0.65642086 3275 Q9QYB8 Add2 Beta-adducin yes yes 0 0 0 0 10.8 1.48 1 1 1 1 66.729 66.729 2;3 0.00069564 18990 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.099 50.844 292.19 0 304.94 116.89 175.81 241.23 274 0 288 111 176 231 3 0 3 1 2 2 57131 22354 3275 21513 51909;51910;51911;51912 60179;60180;60181;60182 60180 4 WLNVHYHCSGAPAAPLQ Unmodified 1919.9101 0.91008614 2818 Q923T9;A0A2I3BQP6 Camk2g Calcium/calmodulin-dependent protein kinase type II subunit gamma yes no 0 0 0 0 11 0 1 58.657 58.657 3 0.0011231 15080 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.988 39.93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22355 2818 21514 51913 60183 60183 1 WLPAGDALLQMITIHLPSPVTAQK Unmodified 2599.4196 0.41961498 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 12 0 1 102.72 102.72 4 3.7618E-05 28875 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 50.215 28.817 9.5798 15.314 0 6.558 0 0 9 15 0 6 0 0 1 1 0 1 0 0 2186.5 22356 1652 21515 51914 60184 60184 1 WLPAPATFPVYDPASGAK Unmodified 1886.9567 0.95668521 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 10.8 1.34 1 2 1 1 1 85.349 85.349 2;3;4 3.3098E-07 29701 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.569 67.84 59.212 170.15 211.96 77.211 160.67 189 56 167 208 75 158 185 1 3 3 2 2 3 137800 22357 2469 21516 51915;51916;51917;51918;51919;51920 60185;60186;60187;60188;60189;60190;60191 60185 7 WLPELVDR Unmodified 1026.5498 0.54983053 3170 Q9EQ20 Aldh6a1 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial yes yes 0 0 0 0 10 3 1 1 73.669 73.669 2 0.015661 25756 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.206 46.505 98.618 169.03 120.29 81.504 172.72 222.13 93 167 120 83 176 213 1 2 1 1 2 2 24321 22358 3170 21517 51921;51922 60192;60193 60192 2 WLPLEANPEVTNQFLK Unmodified 1897.9938 0.993799 3226 Q9JKB1;P58321 Uchl3;Uchl4 Ubiquitin carboxyl-terminal hydrolase isozyme L3;Ubiquitin carboxyl-terminal hydrolase isozyme L4 yes no 0 0 0 0 11.5 1.5 1 1 87.917 87.917 3 1.9066E-05 34617 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 82.837 64.92 85.149 51.569 72.361 123.29 14.95 88.478 80 55 74 117 15 83 2 2 1 2 1 1 14716 22359 3226 21518 51923;51924 60194;60195 60195 2 WLPLGLGLNHLGK Unmodified 1416.8242 0.82415489 2697 Q8VDM4;A0A338P6S9;A0A338P7H4 Psmd2 26S proteasome non-ATPase regulatory subunit 2 yes no 0 0 0 0 1 0 2 91.945 91.945 3 2.0149E-11 32667 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 120.06 88.988 45.066 0 0 20.332 41.311 18.669 42 0 0 19 41 18 3 0 0 1 3 2 1109.5 22360 2697 21519 51925;51926 60196;60197;60198;60199 60197 4 WLPTVIAASK Unmodified 1084.6281 0.62808085 52 S4R2D5;S4R2T5;A0A0A0MQN4;Q9D906 Atg7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 0 0 0 0 6.5 5.5 1 1 77.011 77.011 2;3 0.011857 26775 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 63.816 25.578 0 20.216 0 20.411 46.201 58.918 0 19 0 19 47 56 0 1 0 1 2 1 12644 22361 52 21520 51927;51928 60200;60201 60200 2 WLQTEVQNPSVTSK Unmodified 1615.8206 0.82058566 1511 P34914;A8JYK8 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 0 0 0 8 0 1 63.921 63.921 3 0.034605 20374 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 36.597 17.273 78.907 42.841 46.804 0 0 69.29 74 46 46 0 0 65 1 1 1 0 0 1 4379 22362 1511 21521 51929 60202 60202 1 WLQTEVQNPSVTSK Deamidation (N) 1616.8046 0.80460124 1511 P34914;A8JYK8 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 1 0 0 13 0 1 63.388 63.388 3 0.015989 22816 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.54 23.983 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22363 1511 21521 51930 60203 60203 563 1 WLSPTQLSALCK Unmodified 1402.7279 0.72787125 3208 Q9JI90 Rnf14 E3 ubiquitin-protein ligase RNF14 yes yes 0 0 0 0 11 1 1 1 77.099 77.099 2;3 3.0983E-05 20714 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.734 51.761 75.923 0 20.407 0 0 0 74 0 19 0 0 0 2 0 1 0 0 0 4383.2 22364 3208 21522 51931;51932 60204;60205 60205 2 WLSSEIEETKPAK Unmodified 1516.7773 0.77732386 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 1 6.5 0.5 1 1 62.654 62.654 4 0.00052075 20404 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 68.676 51.737 177.63 133.43 149.1 129.78 314.65 258.59 167 139 148 130 315 251 2 2 1 1 2 2 29151 22365 141 21523 51933;51934 60206;60207 60207 2 WLSTSIPEAQWQSSLAR Unmodified 1958.985 0.98502522 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 9 0 1 79.063 79.063 3 8.6948E-09 26903 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.67 95.265 0 69.16 0 80.103 41.438 87.296 0 65 0 74 46 83 0 1 0 1 1 1 15351 22366 1412 21524 51935 60208 60208 1 WLVLCNPGLAEVIAER Unmodified 1838.9713 0.97128941 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 12 1 1 1 90.373 90.373 3 1.0345E-05 29069 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.772 58.373 29.93 0 19.126 28.761 37.381 0 28 0 19 28 37 0 1 0 1 1 1 0 6944.7 22367 3331 21525 51936;51937 60209;60210 60209 2 WMDWNAPQIQYR Unmodified 1606.7351 0.73508189 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;F7A5H7 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 9 0 1 75.746 75.746 3 0.031144 25320 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.095 29.328 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22368 456 21526 51938 60211 60211 1 WMIPPEAK Unmodified 970.49462 0.49462383 307 A0A1L1STE6;Q9D6R2 Idh3a Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial yes no 0 0 0 0 9 0 3 66.764 66.764 2;3 0.005493 21229 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.616 53.82 0 48.944 0 29.528 57.22 0 0 46 0 28 56 0 0 1 0 1 1 0 4621.1 22369 307 21527 51939;51940;51941 60212;60213;60214 60213 3 WMLSLTK Unmodified 877.47316 0.47316011 1390 P16330 Cnp 2',3'-cyclic-nucleotide 3'-phosphodiesterase yes yes 0 0 0 0 6.75 5.76 2 1 1 75.45 75.45 2;3 0.0072946 26056 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 129.4 51.723 1228.1 568.32 982.69 540.16 1474.1 1299.3 1151 576 948 546 1470 1251 9 7 6 5 8 7 183470 22370 1390 21528 51942;51943;51944;51945 60215;60216;60217;60218;60219;60220;60221;60222;60223;60224;60225 60216 11 WNDVPCNYNLPYVCK Unmodified 1940.8549 0.85493903 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 9 0 1 74.444 74.444 3 0.028206 24711 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.093 24.689 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22371 144 21529 51946 60226 60226 1 WNGQETTLTR Deamidation (N) 1205.5677 0.56766543 1352 P11404 Fabp3 Fatty acid-binding protein, heart yes yes 0 1 0 0 8.2 3.97 1 1 1 2 51.023 51.023 2 0.0007103 16284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.86 63.666 185.84 223.21 263.91 125.08 203.96 409.92 175 222 259 120 204 390 3 4 4 2 2 5 46900 22372 1352 21530 51947;51948;51949;51950;51951 60227;60228;60229;60230;60231 60230 421 5 WNPFIDNIIASCSEDTSVR Unmodified 2223.0266 0.026632041 2393 Q8BH44;G3UW48;G3V005 Coro2b Coronin-2B;Coronin yes no 0 0 0 0 7.5 0.5 1 1 87.818 87.818 3 3.2775E-06 31702 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.122 52.823 0 20.216 0 20.411 18.936 0 0 19 0 19 19 0 0 1 0 1 1 0 7958.8 22373 2393 21531 51952;51953 60232;60233 60233 2 WNPVTGYTSR Unmodified 1179.5673 0.5672715 2323 Q80VP0 Tecpr1 Tectonin beta-propeller repeat-containing protein 1 yes yes 0 0 0 0 9 0 1 57.059 57.059 2 0.01262 16505 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.271 20.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22374 2323 21532 51954 60234 60234 1 WNQLQAFWGTGK Unmodified 1434.7044 0.70443369 2456 Q8BTS4 Nup54 Nuclear pore complex protein Nup54 yes yes 0 0 0 0 12 0 1 81.545 81.545 3 0.00065568 22557 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.473 43.366 29.737 27.31 28.508 0 29.288 0 28 28 28 0 28 0 1 1 1 0 1 0 2886.8 22375 2456 21533 51955 60235 60235 1 WNSPAEEGLSDCEVFPK Unmodified 1963.8622 0.86219247 1957 Q3U2G2;Q61316 Hspa4 Heat shock 70 kDa protein 4 yes no 0 0 0 0 7.33 4.03 1 1 1 72.493 72.493 3 9.5966E-07 27070 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 80.316 61.241 137.8 36.052 73.487 146.71 36.358 186.58 129 37 74 139 37 176 2 1 1 2 1 2 30481 22376 1957 21534 51956;51957;51958 60236;60237;60238 60238 3 WNSVFDQLTQVVK Unmodified 1562.8093 0.80929269 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 10.5 0.5 1 1 90.413 90.413 3 0.00010734 29068 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 76.262 54.487 0 47.859 64.904 117.69 45.344 0 0 46 65 112 46 0 0 1 1 2 1 0 26194 22377 1567 21535 51959;51960 60239;60240 60240 2 WNTDNTLGTEIAIEDQICQGLK Unmodified 2518.201 0.20096759 2096 Q60930;G3UX26;A0A286YCR8;D3YZT5 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 7.75 3.11 2 2 2 2 88.388 88.388 3;4 3.2227E-20 34818 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 93.73 78.802 178.02 72.177 193.82 135.84 92.564 186.04 167 74 186 130 93 177 5 2 4 4 2 6 24391 22378 2096 21536 51961;51962;51963;51964;51965;51966;51967;51968 60241;60242;60243;60244;60245;60246;60247;60248 60248 8 WNTDNTLGTEISWENK Unmodified 1906.8697 0.86972069 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 0 6 1 1 1 74.402 74.402 3 0.00055719 27484 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 56.424 38.724 79.995 38.006 48.451 67.5 80.925 111.75 75 37 46 65 84 107 3 1 1 2 3 3 16502 22379 1141 21537 51969;51970 60249;60250;60251 60249 3 WNTDNTLGTEITVEDQLAR Unmodified 2175.0444 0.044390595 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 6.33 3.09 2 1 2 1 74.96 74.96 2;3 1.0507E-53 27671 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 163.45 136.61 288.38 169.66 142.82 246.79 239.41 282.62 270 176 140 232 241 269 5 5 4 6 4 6 97132 22380 978;2097 21538 51971;51972;51973;51974;51975;51976 60252;60253;60254;60255;60256;60257;60258;60259;60260;60261;60262 60256 11 WNTEDKVSHVSTGGGASLELLEGK Unmodified 2513.2398 0.23979594 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 1 6.8 0.748 2 2 1 67.415 67.415 4;5 1.05E-07 23638 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.991 47.423 316.46 199.66 204.16 158.7 336.98 268.1 297 204 204 157 334 259 6 4 4 4 5 5 31677 22381 1334 21539 51977;51978;51979;51980;51981 60263;60264;60265;60266;60267;60268 60263 6 WPFSLSEQQLDAR Unmodified 1575.7682 0.76815616 1979 Q3UHD6;A0A0G2JF85;A0A0G2JGD5 Snx27 Sorting nexin-27 yes no 0 0 0 0 8.33 0.471 2 1 77.62 77.62 2;3 0.010298 26177 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.353 20.465 0 56.898 19 8.1796 46.915 29.051 0 56 19 9 47 28 0 2 1 1 2 1 7505.2 22382 1979 21540 51982;51983;51984 60269;60270;60271 60271 3 WPIFTLLSPQEAGSIR Unmodified 1813.9727 0.97266962 151 G3UZL2;G3UZ62;A0A0R4J025;Q6NXM2 Rcbtb1 RCC1 and BTB domain-containing protein 1 yes no 0 0 0 0 12 0 1 95.355 95.355 3 0.00031231 27267 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.377 42.271 0 0 14.517 19.639 13.993 5.33 0 0 14 19 14 5 0 0 1 2 1 1 1826.6 22383 151 21541 51985 60272;60273 60272 2 WPLYLSTK Unmodified 1006.5488 0.54876789 1618 P54071 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes yes 0 0 0 0 6.5 5.5 1 1 74.81 74.81 2 0.0037439 19727 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.62 65.608 287.05 137.36 150.67 221.59 119.27 215.12 269 139 148 213 120 203 4 2 2 4 2 3 65827 22384 1618 21542 51986;51987 60274;60275;60276;60277 60277 4 WPVHLMETLLPR Unmodified 1490.8068 0.80679027 3331 Q9WUB3;E9PUM3 Pygm Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase yes no 0 0 0 0 12 0 1 84.105 84.105 3 0.00062711 23414 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 63.944 49.525 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3207 22385 3331 21543 51988 60278 60278 1 WPVSMFEK Unmodified 1022.4895 0.48953845 2555 Q8CI94 Pygb Glycogen phosphorylase, brain form yes yes 0 0 0 0 10.5 0.5 1 1 77.846 77.846 2 0.002771 24051 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 126.52 86.419 207.87 159.2 267.35 51.318 233.25 332.92 195 167 259 56 231 315 1 2 2 1 2 2 29400 22386 2555 21544 51989;51990 60279;60280;60281 60280 3 WPYAGTAEAIK Unmodified 1205.6081 0.60807369 3037 Q9D172;A0A1W2P7B6;A0A1W2P870 D10Jhu81e ES1 protein homolog, mitochondrial yes no 0 0 0 0 10.5 2.5 1 1 65.139 65.139 2;3 0.00015122 21134 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 91.658 51.069 48.978 163.75 0 168.4 170.08 182.76 46 157 0 157 176 176 1 2 0 2 2 2 16663 22387 3037 21545 51991;51992 60282;60283 60282 2 WPYQNGFTLNTWFR Deamidation (N) 1829.8526 0.85255449 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 1 0 0 10 0 1 94.142 94.142 3 0.020105 30713 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.408 29.127 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 715.06 22388 3165 21546 51993 60284 60284 1096 1 WQAFQAVVSEQR Unmodified 1447.7208 0.72081203 893 Q3UGX2;E9Q397;P15508 Sptb Spectrin beta chain, erythrocytic yes no 0 0 0 0 9 0 1 70.39 70.39 2 2.4548E-08 22836 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.89 77.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4773.8 22389 893 21547 51994 60285 60285 1 WQALLVQIR Unmodified 1125.6659 0.66586334 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 1 0 1 79.932 79.932 2 0.0032636 27808 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 79.474 31.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22390 3204 21548 51995 60286 60286 1 WQIGEQEFEALMR Unmodified 1635.7715 0.77152697 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6V4G5 Add1 Alpha-adducin yes no 0 0 0 0 7 0.816 1 1 1 86.264 86.264 2 5.6101E-15 32261 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 136.53 106.76 39.489 49.048 19.355 41.534 0 59.696 37 47 19 38 0 56 2 2 1 2 0 2 6598.8 22391 3276 21549 51996;51997;51998 60287;60288;60289;60290 60288 4 WQIVHFHR Unmodified 1121.5883 0.58828172 1355 P11798;F8WIS9;F8WHB5 Camk2a Calcium/calmodulin-dependent protein kinase type II subunit alpha yes no 0 0 0 0 11 0.707 1 2 1 47.854 47.854 2;3 0.00082412 11005 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 119.27 81.799 881.66 778.78 841.31 1001.2 66.371 1007.6 830 796 861 963 65 947 5 4 4 5 1 5 161620 22392 1355 21550 51999;52000;52001;52002 60291;60292;60293;60294;60295;60296;60297 60292 7 WQNNLLPSR Unmodified 1126.5883 0.5883413 1052 F8WJ41;P62245 Rps15a 40S ribosomal protein S15a yes no 0 0 0 0 9 0 1 59.543 59.543 2 0.00039181 17655 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 126.82 96.232 0 147.9 0 80.882 0 118.33 0 139 0 74 0 111 0 1 0 1 0 1 9869.5 22393 1052 21551 52003 60298 60298 1 WQNSHSIK Unmodified 998.49338 0.49337828 3014 Q9CZY3;B7ZBY7;E9PY39 Ube2v1;Gm20431 Ubiquitin-conjugating enzyme E2 variant 1 yes no 0 0 0 0 9 0 1 39.541 39.541 3 0.0089839 8645 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 65.347 27.261 324.68 277.13 379.59 274.43 361.61 403.29 306 287 379 278 371 388 1 1 1 1 1 1 19150 22394 3014 21552 52004 60299 60299 1 WQNSYSIK Unmodified 1024.4978 0.49779495 3050 Q9D2M8;A6X925;B2KF55 Ube2v2 Ubiquitin-conjugating enzyme E2 variant 2 yes no 0 0 0 0 10 1.67 1 1 2 1 56.585 56.585 2;3 0.0055843 14461 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.233 10.971 78.59 72.177 75.341 0 74.438 86.354 74 74 74 0 74 83 1 1 1 0 1 1 3939.2 22395 3050 21553 52005;52006;52007;52008;52009 60300;60301;60302;60303;60304 60302 5 WQNVHFHCSGAPVAPLQ Unmodified 1946.921 0.92098518 1475 P28652;Q5SVI0;Q5SVI2;Q5SVJ0;Q5SVI3;Q5SVI9;Q5SVJ1;Q68EG2;Q5SVI1 Camk2b Calcium/calmodulin-dependent protein kinase type II subunit beta yes no 0 0 0 0 8.5 1.12 1 1 1 1 58.847 58.847 3 2.1846E-06 18042 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.156 63.056 59.261 185.07 145.51 39.056 208.63 86.098 56 177 139 37 204 84 2 4 3 1 4 2 93417 22396 1475 21554 52010;52011;52012;52013 60305;60306;60307;60308;60309 60306 5 WQTVLPVTQK Unmodified 1198.671 0.67100829 552 A3KMP2 Ttc38 Tetratricopeptide repeat protein 38 yes yes 0 0 0 0 10 0 1 69.141 69.141 2 0.046862 20153 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.579 18.782 29.923 0 20.407 0 0 0 28 0 19 0 0 0 1 0 1 0 0 0 1842.6 22397 552 21555 52014 60310 60310 1 WREEQTER Unmodified 1132.5261 0.52613497 599;600 B1AWD8;B1AWD9;O08585;B1AWE1;B1AWE0;Q6PFA2 Clta Clathrin light chain A no no 0 0 0 1 4 0 1 30.069 30.069 3 0.021351 7065 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 69.915 22.062 48.825 0 89.56 0 0 69.29 46 0 83 0 0 65 1 0 1 0 0 1 24265 22398 599;600 21556 52015 60311 60311 1 WRPVDLAQVK Unmodified 1210.6822 0.68224168 456 A2AFG7;A2AFG8;Q6PGJ3;P11627 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 1 9.5 0.5 1 1 60.484 60.484 3 0.0037146 18209 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.9 41.15 256.59 110.6 242.08 241.33 0 237.72 241 120 241 234 0 223 2 1 2 2 0 2 31204 22399 456 21557 52016;52017 60312;60313 60312 2 WSACNIYSTQNEVAAALAEAGVAVFAWK Unmodified 3026.4596 0.45964189 2298 Q80SW1;D3Z2Q0;F7ATQ6 Ahcyl1 Putative adenosylhomocysteinase 2 yes no 0 0 0 0 13 0 1 113.25 113.25 4 6.4795E-08 44703 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 53.262 40.708 5 0 0 0 0 0 5 0 0 0 0 0 1 0 0 0 0 0 820.81 22400 2298 21558 52018 60314 60314 1 WSGLLVTVGEVLEK Unmodified 1528.8501 0.85009487 2000 Q3UPH1 Prrc1 Protein PRRC1 yes yes 0 0 0 0 9.5 0.5 1 1 100.63 100.63 3 0.00033277 35828 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.93 45.052 20.387 0 0 15.217 4.531 0 19 0 0 14 5 0 1 0 0 1 1 0 2388 22401 2000 21559 52019;52020 60315;60316 60315 2 WSIENVSFGSGGALLQK Unmodified 1791.9155 0.91554867 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 10 0 1 82.818 82.818 3 0.039485 26271 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 31.883 4.2344 30.044 0 0 70.555 26.047 0 28 0 0 65 28 0 1 0 0 1 1 0 2508.4 22402 2848 21560 52021 60317 60317 1 WSLQSEAHR Unmodified 1112.5363 0.53630573 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 7.5 0.5 1 1 41.886 41.886 3 0.0021524 9961 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.173 48.279 236.96 149.69 82.577 95.562 195.05 131.95 222 157 83 93 195 129 2 2 1 1 2 2 21174 22403 2131 21561 52022;52023 60318;60319 60319 2 WSPALQIR Unmodified 969.5396 0.53960019 1688 P61089 Ube2n Ubiquitin-conjugating enzyme E2 N yes yes 0 0 0 0 9.5 0.5 1 1 61.363 61.363 2 0.01221 16705 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 90.308 20.404 98.946 263.57 64.359 338.12 444.71 0 93 255 65 317 440 0 1 2 1 1 1 0 64282 22404 1688 21562 52024;52025 60320;60321 60321 2 WSPLENK Unmodified 872.43922 0.43921744 3303 Q9R0Q6;A0A0G2JF52;D3YVI5 Arpc1a Actin-related protein 2/3 complex subunit 1A yes no 0 0 0 0 10 2.16 1 1 1 58.635 58.635 2 0.0063621 20308 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 143 73.572 674.04 451.14 1022.2 779.44 763.79 717.79 633 449 1005 782 788 689 2 2 3 3 3 2 80020 22405 3303 21563 52026;52027;52028 60322;60323;60324 60324 3 WSPVASTLPELVQR Unmodified 1581.8515 0.85149185 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 8 0 1 77.013 77.013 2 1.314E-10 26641 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 119.74 79.154 29.856 37.355 0 29.762 44.743 58.419 28 37 0 28 46 56 1 1 0 1 1 1 6868.5 22406 2844 21564 52029 60325 60325 1 WSSLACNIALDAVK Unmodified 1546.7814 0.78136338 1827 P80318;E9Q133;Q3U0I3;F6Q609 Cct3 T-complex protein 1 subunit gamma yes no 0 0 0 0 9.5 0.5 1 1 82.549 82.549 2 0.00020927 28455 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.902 74.11 0 19.743 28.294 18.349 38.905 0 0 19 28 19 38 0 0 1 1 1 1 0 2836.9 22407 1827 21565 52030;52031 60326;60327 60326 2 WSTANPSTVAGR Unmodified 1245.6102 0.61019895 934 E9Q8N5;Q08EB6;Q08EB5;F7DCH5;Q8BRT1 Clasp2 CLIP-associating protein 2 yes no 0 0 0 0 8 0 1 47.698 47.698 2 0.0013922 12818 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.536 37.114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22408 934 21566 52032 60328 60328 1 WSTLEEK Unmodified 891.4338 0.43379771 1104 G5E8H1 Gria2 no no 0 0 0 0 10 3 1 1 56.717 56.717 3 0.0085859 18024 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.469 25.914 78.651 0 126.27 71.234 112.83 0 74 0 120 74 111 0 1 0 1 1 1 0 3684.2 22409 1104 21567 52033;52034 60329;60330 60329 2 WSTLVEDYGVELR Unmodified 1565.7726 0.77257283 3097 Q9D8W5;B1AT36;Q3TRH2 Psmd12 26S proteasome non-ATPase regulatory subunit 12 yes no 0 0 0 0 8.67 3.09 1 1 1 82.333 82.333 2;3 0.00010288 30543 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 76.728 47.77 50.166 19.11 28.276 18.547 48.31 0 47 19 28 19 47 0 2 1 1 1 2 0 4827.3 22410 3097 21568 52035;52036;52037 60331;60332;60333 60331 3 WSVLTSK Unmodified 819.44905 0.44905385 1843 P97333 Nrp1 Neuropilin-1 yes yes 0 0 0 0 11 0 1 63.326 63.326 2 0.034462 17097 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 82.716 24.029 0 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 0 0 8880.4 22411 1843 21569 52038 60334 60334 1 WSYGAGVVLR Unmodified 1106.5873 0.58727866 2379 Q8BGH2 Samm50 Sorting and assembly machinery component 50 homolog yes yes 0 0 0 0 10.5 0.5 1 1 64.656 64.656 2 0.0010161 17587 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.143 54.325 45.924 42.655 0 63.732 40.149 55.352 43 43 0 59 43 53 1 1 0 1 1 1 4720 22412 2379 21570 52039;52040 60335;60336 60336 2 WTAVAPLPR Unmodified 1009.5709 0.57090032 2438 Q8BNW9 Kbtbd11 Kelch repeat and BTB domain-containing protein 11 yes yes 0 0 0 0 10 0.816 1 1 1 62.304 62.304 2 0.0017334 16984 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.629 46.941 168.14 155.05 103.46 264.75 124.19 311.99 158 158 111 250 130 296 1 1 1 2 1 2 34539 22413 2438 21571 52041;52042;52043 60337;60338;60339 60338 3 WTDENIDMVALK Deamidation (N) 1434.6701 0.67008159 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 1 0 0 13 0 1 76.177 76.177 3 0.002029 29005 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 63.537 41.664 39.245 35.949 46.214 27.006 44.869 58.416 37 37 46 28 46 56 1 1 1 1 1 1 4364.8 22414 3204 21572 52044 60340 60340 1105 1 WTDLFDTK Unmodified 1024.4866 0.48656157 2178 Q64514;A0A087WQR6 Tpp2 Tripeptidyl-peptidase 2 yes no 0 0 0 0 8 0 1 78.869 78.869 2 0.03505 27440 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.716 40.614 69.329 0 69.98 0 94.662 76.183 65 0 65 0 93 74 1 0 1 0 1 1 5458.2 22415 2178 21573 52045 60341 60341 1 WTEGLISASK Unmodified 1090.5659 0.56587452 3239;2694 Q9JKY5;A0A0G2JFU3;Q8VD75;A0A0J9YUA3 Hip1r;Hip1 Huntingtin-interacting protein 1-related protein;Huntingtin-interacting protein 1 no no 0 0 0 0 8 0 1 66.323 66.323 3 0.016453 21591 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 48.741 5.1127 39.295 36.089 37.671 0 0 0 37 37 37 0 0 0 1 1 1 0 0 0 2322.3 22416 3239;2694 21574 52046 60342 60342 1 WTELLPLIQQYEVVR Unmodified 1886.0302 0.030184501 2741 Q91VI7;A0A1B0GSG5;A0A1B0GRG4;A0A1B0GRY7 Rnh1 Ribonuclease inhibitor yes no 0 0 0 0 10.8 1.48 1 1 1 1 98.796 98.796 3 3.3946E-05 32279 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.529 58.698 40.679 18.848 47.228 33.814 34.203 9.1851 38 19 46 32 33 9 2 1 3 2 2 1 12366 22417 2741 21575 52047;52048;52049;52050 60343;60344;60345;60346;60347;60348 60345 6 WTELLQGPSAATR Unmodified 1428.7361 0.73612775 69 A0A0A6YXG0;Q9JKK1 Stx6 Syntaxin-6 yes no 0 0 0 0 9 0 1 71.578 71.578 3 0.0024746 23408 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 56.482 41.274 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22418 69 21576 52051 60349 60349 1 WTEYGLTFTEK Unmodified 1373.6503 0.65033243 2097;978 F2Z471;Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 no no 0 0 0 0 8.8 2.23 2 1 1 1 75.136 75.136 2;3 2.831E-33 25680 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 192.21 144.5 826.6 321.8 707.39 701.26 504.48 271.21 775 342 694 683 522 259 5 3 5 5 6 3 209930 22419 978;2097 21577 52052;52053;52054;52055;52056 60350;60351;60352;60353;60354;60355 60353 6 WTFLSGDR Unmodified 980.47158 0.4715802 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 0 9 0 1 67.317 67.317 2 0.010729 21343 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 96.311 49.475 139.49 0 0 101.65 0 0 130 0 0 93 0 0 1 0 0 1 0 0 17381 22420 2125 21578 52057 60356 60356 1 WTFLSGDREVEVLVAR Unmodified 1875.9843 0.98429694 2125 Q61361;A0A0A6YW95 Bcan Brevican core protein yes no 0 0 0 1 8 0 1 77.05 77.05 3 0.00036943 26661 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.469 40.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22421 2125 21579 52058 60357 60357 1 WTGDNMFFIK Unmodified 1257.5852 0.58522975 2028 Q4KMM3;E9Q0A7;A0A2R8VHT3;B1H3M0 Oxr1 Oxidation resistance protein 1 yes no 0 0 0 0 10.7 1.7 1 1 1 81.826 81.826 2;3 0.007089 31668 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 55.426 30.209 69.296 104.77 85.108 125.09 52.811 67.783 65 102 84 120 56 65 2 2 2 3 2 2 16971 22422 2028 21580 52059;52060;52061 60358;60359;60360 60360 3 WTGMIIGPPR Unmodified 1126.5957 0.59573486 3014;3050 Q9CZY3;B7ZBY7;E9PY39;B7ZBY6;Q9D2M8;A6X925;B2KF55 Ube2v1;Gm20431;Ube2v2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 0 11 0.816 1 1 1 69.925 69.925 2 3.5271E-06 20544 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.37 83.373 0 73.416 0 59.154 109.2 0 0 69 0 56 107 0 0 1 0 1 1 0 81474 22423 3014;3050 21581 52062;52063;52064 60361;60362;60363 60361 3 WTIQYNK Unmodified 951.48142 0.48141661 2804 Q922D8;A0A1W2P733 Mthfd1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed yes no 0 0 0 0 10.5 0.5 1 1 59.428 59.428 2 0.027243 15843 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.47 56.852 168.57 99.922 77.234 135.36 113.3 244.08 158 102 83 130 120 232 2 1 1 1 1 2 12297 22424 2804 21582 52065;52066 60364;60365 60364 2 WTLGFCDER Unmodified 1182.5128 0.51279309 2911 Q9CQ60;Q8CBG6;F6X8L5 Pgls 6-phosphogluconolactonase yes no 0 0 0 0 7 0 1 67.977 67.977 2 0.054607 22970 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 54.982 31.132 49 25.849 38.236 0 56.581 58.081 46 28 37 0 56 56 1 1 1 0 1 1 2924.8 22425 2911 21583 52067 60366 60366 1 WTLLQEQGTK Unmodified 1202.6295 0.62953741 651 CON__P48668;CON__P04259;CON__P02538;CON__P13647 yes no 0 0 0 0 9 0 2 66.045 66.045 2;3 0.0060184 20773 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.885 46.143 39.405 26.68 101.21 28.983 0 59.696 37 28 102 28 0 56 1 1 2 1 0 1 8597.4 + 22426 651 21584 52068;52069 60367;60368 60367 2 WTNIPLLVK Unmodified 1082.6488 0.64881629 957 E9QKZ2;Q91YE6;F6TLX3 Ipo9 Importin-9 yes no 0 0 0 0 12 0 1 81.87 81.87 2 0.018302 22538 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 66.568 27.349 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 9395 22427 957 21585 52070 60369 60369 1 WTQLGAFYPFMR Unmodified 1515.7333 0.73329097 1821 P70699;F6R5R5 Gaa Lysosomal alpha-glucosidase yes no 0 0 0 0 12 0 1 88.893 88.893 2 0.010694 25349 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 56.404 35.372 5.275 0 15.121 0 0 14.924 5 0 14 0 0 14 1 0 1 0 0 1 1848.1 22428 1821 21586 52071 60370 60370 1 WTQLLANSATR Deamidation (N) 1260.6463 0.64625011 551 A3KGU7;A3KGU9;P16546;A3KGU5;E9Q447 Sptan1 Spectrin alpha chain, non-erythrocytic 1 yes no 0 1 0 0 9 0 1 67.661 67.661 2 0.015298 21508 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.356 57.422 0 77.729 60.256 0 0 0 0 74 60 0 0 0 0 1 1 0 0 0 8729.4 22429 551 21587 52072 60371 60371 159 1 WTQTLAELDLAVPFR Unmodified 1758.9305 0.93047046 1207 O35685 Nudc Nuclear migration protein nudC yes yes 0 0 0 0 9 0 1 95.996 95.996 3 0.022989 34293 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 38.116 25.489 0 20.216 0 0 0 20.254 0 19 0 0 0 19 0 1 0 0 0 1 6371.2 22430 1207 21588 52073 60372 60372 1 WTSASMPWAAVK Unmodified 1333.6489 0.64889264 2487 Q8C0M9 Asrgl1 Isoaspartyl peptidase/L-asparaginase;Isoaspartyl peptidase/L-asparaginase alpha chain;Isoaspartyl peptidase/L-asparaginase beta chain yes yes 0 0 0 0 11 1 1 1 75.527 75.527 3 6.0777E-06 19920 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 97.734 73.39 60.088 29.792 0 90.719 0 138.58 56 28 0 83 0 130 1 1 0 1 0 2 15297 22431 2487 21589 52074;52075 60373;60374 60374 2 WTSLEQLQK Unmodified 1131.5924 0.59242362 3408 yes no 0 0 0 0 6 0 1 57.406 57.406 3 0.014605 18732 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.727 16.973 48.642 55.073 73.636 64.705 103.72 0 46 56 74 65 102 0 1 1 1 1 1 0 21362 + 22432 3408 21590 52076 60375 60375 1 WTTEQQQR Unmodified 1075.5047 0.50467125 3236 Q9JKW0 Arl6ip1 ADP-ribosylation factor-like protein 6-interacting protein 1 yes yes 0 0 0 0 13 0 1 35.872 35.872 2 0.025495 9433 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.501 42.774 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22433 3236 21591 52077 60376 60376 1 WTTTTLGLLAIPVIIHPIDR Unmodified 2229.2885 0.28852445 2964 Q9CRB8 Mtfp1 Mitochondrial fission process protein 1 yes yes 0 0 0 0 12 0 1 95.939 95.939 3 4.5519E-06 27513 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 59.857 49.692 12.78 0 16.166 0 0 0 12 0 15 0 0 0 1 0 1 0 0 0 1359.2 22434 2964 21592 52078 60377 60377 1 WTVQYNVSPLSWNVAVK Unmodified 1990.0312 0.031247134 1184 O35239 Ptpn9 Tyrosine-protein phosphatase non-receptor type 9 yes yes 0 0 0 0 11 0 1 86.929 86.929 3 0.018559 27669 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.64 18.134 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1517.9 22435 1184 21593 52079 60378 60378 1 WVDEVVPAAPYVTTLETLDK Unmodified 2245.1518 0.15181578 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 0 6 0 1 94.333 94.333 3 0.00034699 35692 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.315 35.278 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22436 441 21594 52080 60379 60379 1 WVDVGGAYVGPTQNR Unmodified 1617.79 0.78995423 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 8 0 1 64.295 64.295 3 0.022989 20614 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.116 19.804 0 0 57.625 66.604 53.519 58.169 0 0 56 65 56 56 0 0 1 1 1 1 4086.4 22437 2168 21595 52081 60380 60380 1 WVEQNLGPEFVER Unmodified 1601.7838 0.78380622 3246 Q9JM14;A2A9X5 Nt5c 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 0 5 0 1 70.625 70.625 2 1.6012E-13 25675 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 130.56 89.85 0 19.751 27.822 28.946 0 0 0 19 28 28 0 0 0 1 1 1 0 0 4378.6 22438 3246 21596 52082 60381 60381 1 WVGGPEIELIAIATGGR Unmodified 1737.9414 0.94136949 1825 P80316 Cct5 T-complex protein 1 subunit epsilon yes yes 0 0 0 0 9.2 2.04 1 1 2 1 96.11 96.11 2;3 1.1728E-12 34480 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.79 96.351 39.545 30.969 0 55.629 69.647 9.594 37 31 0 53 68 9 3 2 0 3 3 1 20477 22439 1825 21597 52083;52084;52085;52086;52087 60382;60383;60384;60385;60386 60385 5 WVGVILDEAK Unmodified 1128.6179 0.61791009 895 E9Q3M3;O08788;E9Q586;D3Z2M9;D3YYG9 Dctn1 Dynactin subunit 1 yes no 0 0 0 0 8 0 1 80.067 80.067 2 0.013453 28066 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 61.48 27.93 58.733 0 47.362 47.455 0 69.29 55 0 46 46 0 65 1 0 1 1 0 1 3553.2 22440 895 21598 52088 60387 60387 1 WVHSAEPVYFLR Unmodified 1502.767 0.76703394 2288 Q7TNR6 Igsf21 Immunoglobulin superfamily member 21 yes yes 0 0 0 0 8 0 1 65.151 65.151 3 0.0021809 21014 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 56.087 29.969 58.625 34.814 35.973 37.633 35.324 48.028 55 37 37 37 37 46 1 1 1 1 1 1 2254.9 22441 2288 21599 52089 60388 60388 1 WVIPALK Unmodified 825.51126 0.51126017 1813 Q4FE56;P70398;F8VPU6;E9PWA9;G3UY52 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 12 0 1 76.171 76.171 2 0.027447 20268 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 94.669 49.977 0 0 170.96 0 141.14 123.89 0 0 158 0 139 120 0 0 1 0 1 1 8744.3 22442 1813 21600 52090 60389 60389 1 WVIYNDQK Unmodified 1064.5291 0.52909508 1641 Q3U4W8;P56399 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 10.5 2.5 1 1 62.372 62.372 2 0.0080957 22174 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 103.74 40.174 196.72 150.89 172.87 168.68 188.55 192.9 185 157 176 167 194 186 2 2 2 2 2 2 12015 22443 1641 21601 52091;52092 60390;60391 60391 2 WVLEHISK Unmodified 1010.5549 0.5549159 870 Q8C163;E9PZS5;A0A1L1SS05 Exog Nuclease EXOG, mitochondrial yes no 0 0 0 0 10 0 1 59.8 59.8 3 0.03814 15971 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.123 13.012 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22444 870 21602 52093 60392 60392 1 WVLTVPAIWK Unmodified 1211.7067 0.70666552 3003 Q9CZJ2 Hspa12b Heat shock 70 kDa protein 12B yes yes 0 0 0 0 4.83 5.43 4 1 1 92.465 92.465 2;3 6.9743E-09 32489 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 152.47 0 142.1 99.215 63.748 181.02 126.05 115.83 133 99 62 170 128 111 7 6 3 8 6 6 42511 22445 3003 21603 52094;52095;52096;52097;52098;52099 60393;60394;60395;60396;60397;60398;60399;60400;60401;60402;60403 60393 11 WVNDVEDSYGQQWTYEQR Unmodified 2301.9927 0.99268938 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7.33 4.03 1 1 1 72.546 72.546 3 3.679E-07 26568 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.495 80.892 59.637 35.963 64.36 87.693 75.284 29.848 56 37 65 84 74 28 2 1 2 3 1 2 17640 22446 2699 21604 52100;52101;52102 60404;60405;60406;60407 60406 4 WVNSHLAR Deamidation (N) 982.49846 0.49846366 2148;2186;893;842 Q68FG2;D3YWH8;Q3UGX2;E9Q397;P15508;Q62261;A0A0A0MQG2;E9PX29;Q91ZE6 Sptbn2;Sptbn4;Sptb;Sptbn1 Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 1 no no 0 1 0 0 7 0 1 46.866 46.866 3 0.0073411 13079 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.069 66.293 0 0 29.449 19.012 0 0 0 0 28 19 0 0 0 0 1 1 0 0 3568.4 22447 2186;893;2148;842 21605 52103 60408 60408 221 1 WVNSHLAR Unmodified 981.51445 0.51444807 2148;2186;893;842 Q68FG2;D3YWH8;Q3UGX2;E9Q397;P15508;Q62261;A0A0A0MQG2;E9PX29;Q91ZE6 Sptbn2;Sptbn4;Sptb;Sptbn1 Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 1 no no 0 0 0 0 10.7 1.7 1 1 1 39.593 39.593 2;3 0.0019491 8640 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 98.933 55.81 226.27 158.44 279.8 94.686 295.99 213.45 213 162 269 88 288 204 2 2 3 2 3 2 113160 22448 2186;893;2148;842 21605 52104;52105;52106 60409;60410;60411;60412 60409 4 WVPAGGSTGFSR Unmodified 1220.5938 0.5938206 56 A0A0A6YXC8;A0A0A6YW06;J3QNM3;E9QKQ9;E9QLZ9;Q03173;E9QKR1 Enah Protein enabled homolog yes no 0 0 0 0 9.5 0.5 1 1 56.968 56.968 2 0.010718 16442 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.743 8.0398 0 19.758 27.382 38.809 0 0 0 19 28 37 0 0 0 1 1 1 0 0 3410.8 22449 56 21606 52107;52108 60413;60414 60413 2 WVPEITHHCPK Unmodified 1402.6816 0.68158975 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 7 0.816 1 1 1 49.094 49.094 3;4 0.00090953 13034 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 66.595 44.723 218.12 108.08 38.213 58.266 225.62 190.77 204 111 37 56 222 185 3 1 1 2 2 3 20040 22450 1676 21607 52109;52110;52111 60415;60416;60417 60417 3 WVPENSEIVWSVK Unmodified 1571.7984 0.79839365 1524 P35585 Ap1m1 AP-1 complex subunit mu-1 yes yes 0 0 0 0 7 0 1 79.625 79.625 3 0.0017223 28495 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.136 9.3621 0 38.394 58.288 0 46.477 47.71 0 37 56 0 46 46 0 1 1 0 1 1 4181 22451 1524 21608 52112 60418 60418 1 WVPPLIGEMYGLR Unmodified 1529.8065 0.80645592 3188 Q9ERS2 Ndufa13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 yes yes 0 0 0 0 12 0.707 1 2 1 93.094 93.094 2;3 0.00013777 29992 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.082 57.192 14.997 9 24.784 24.887 19.874 37 14 9 24 23 19 37 1 1 2 1 1 1 18082 22452 3188 21609 52113;52114;52115;52116 60419;60420;60421;60422 60419 4 WVSDVDEYAPEGVQK Unmodified 1720.7944 0.79443049 1947 Q3TYH2;Q8K386;D3Z1A7;D3YTZ8;D3YWS1;D3YYX5 Rab15 Ras-related protein Rab-15 yes no 0 0 0 0 4 0 1 69.638 69.638 3 0.00019039 25158 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 68.044 51.645 20.387 0 0 0 0 39.442 19 0 0 0 0 37 1 0 0 0 0 1 2130.7 22453 1947 21610 52117 60423 60423 1 WVSENIAFFGGDPR Unmodified 1593.7576 0.75759147 462 A2AGI2;Q8BYM5;A2AGI0;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 8 0 1 79.996 79.996 2 3.9452E-05 28038 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 77.062 49.32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22454 462 21611 52118 60424 60424 1 WVSIFSNDGK Unmodified 1151.5611 0.56112349 3195 Q9ESN6;Q3UHH4;E9QKC6 Trim2 Tripartite motif-containing protein 2 yes no 0 0 0 0 10.8 1.48 1 1 1 1 75.653 75.653 2;3 2.5321E-05 22482 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 126.31 77.517 187.52 123.68 119.19 141.66 168.24 150.33 176 130 120 139 172 144 3 3 2 3 3 2 24651 22455 3195 21612 52119;52120;52121;52122 60425;60426;60427;60428 60427 4 WVSIFSPEGK Unmodified 1148.5866 0.58660996 689 Q3TDT0;D3YUY7;Q9R1R2 Trim3 Tripartite motif-containing protein 3 yes no 0 0 0 0 11.2 1.09 1 2 1 78.203 78.203 2;3 8.3405E-05 23703 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 105.52 62.213 19.832 183.67 126.08 103.31 34.981 137.58 19 177 130 102 37 130 1 4 3 3 1 2 17764 22456 689 21613 52123;52124;52125;52126 60429;60430;60431;60432;60433 60431 5 WVSQWASLAANHTR Unmodified 1625.8063 0.806273 1128 Q6A065;H7BX26 Cep170 Centrosomal protein of 170 kDa yes no 0 0 0 0 12 0 1 65.434 65.434 3 0.037629 16136 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 35.816 19.925 0 69.16 0 40.441 0 49.036 0 65 0 37 0 46 0 1 0 1 0 1 2703 22457 1128 21614 52127 60434 60434 1 WVSSPLK Unmodified 815.45414 0.45413923 1412 P19096;A0A0U1RNJ1 Fasn Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase yes no 0 0 0 0 10.5 0.5 1 1 60.211 60.211 2;3 0.0053384 15657 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 134.44 65.953 59.91 35.328 74 0 48.116 0 56 37 74 0 46 0 1 1 1 0 1 0 20755 22458 1412 21615 52128;52129 60435;60436 60436 2 WVTALELAK Unmodified 1029.5859 0.58588168 1910 Q3B7Z2 Osbp Oxysterol-binding protein 1 yes yes 0 0 0 0 9.5 0.5 1 1 78.479 78.479 2;3 0.0032985 24280 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.897 48.135 49.128 45.631 0 0 0 19 46 46 0 0 0 19 1 1 0 0 0 1 6710.7 22459 1910 21616 52130;52131 60437;60438 60438 2 WVTTASLLDYDTVAGADK Unmodified 1924.9418 0.941823 2799 Q921M3 Sf3b3 Splicing factor 3B subunit 3 yes yes 0 0 0 0 7 0 1 83.94 83.94 3 0.00075075 30584 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.848 31.629 20.121 18.373 29.092 0 0 0 19 19 28 0 0 0 1 1 1 0 0 0 3210.1 22460 2799 21617 52132 60439 60439 1 WVTYFNKPDIDAWELR Unmodified 2052.0105 0.010511692 1360 P12787 Cox5a Cytochrome c oxidase subunit 5A, mitochondrial yes yes 0 0 0 1 10.8 1.4 2 3 2 1 2 83.267 83.267 3;4 5.234E-18 32339 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.96 111.74 718.85 742.44 614.86 689.77 855.57 757.06 676 748 616 667 866 731 8 9 6 7 8 8 291310 22461 1360 21618 52133;52134;52135;52136;52137;52138;52139;52140;52141;52142 60440;60441;60442;60443;60444;60445;60446;60447;60448;60449;60450;60451 60450 12 WVVIGDENYGEGSSR Unmodified 1666.7587 0.75871368 2843 Q99KI0 Aco2 Aconitate hydratase, mitochondrial yes yes 0 0 0 0 7.5 2.63 1 2 1 1 1 66.654 66.654 2;3 2.0118E-81 24161 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 217.24 185.25 254.7 231.83 97.149 108.65 257.56 69.29 242 232 93 102 251 65 4 5 2 2 4 1 130190 22462 2843 21619 52143;52144;52145;52146;52147;52148 60452;60453;60454;60455;60456;60457 60457 6 WVVPVLPK Unmodified 936.57967 0.57967409 1813 Q4FE56;P70398;F8VPU6;E9PWA9 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 8 4.97 1 1 1 77.301 77.301 2 0.0044388 26925 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 118.06 69.26 286.6 119.68 240.09 129.32 74.205 217.46 269 130 232 121 74 204 3 2 2 2 1 2 43193 22463 1813 21620 52149;52150;52151 60458;60459;60460 60458 3 WVVTLYNSK Unmodified 1108.5917 0.59169534 2851 Q99L04 Dhrs1 Dehydrogenase/reductase SDR family member 1 yes yes 0 0 0 0 6.5 5.5 1 1 72.923 72.923 2;3 0.0010501 18737 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.948 49.761 29.789 17.743 27.792 28.948 0 29.848 28 19 28 28 0 28 1 1 1 1 0 1 1728.7 22464 2851 21621 52152;52153 60461;60462 60462 2 WVVVSTLR Unmodified 958.56 0.56000128 578 B1AR74;Q8CCN5;Q0VF62;F7C0F2 Bcas3 Breast carcinoma-amplified sequence 3 homolog yes no 0 0 0 0 12 0 1 66.288 66.288 2 0.0013126 16435 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 143.23 95.127 142.74 0 174.94 112.92 182.9 157.88 134 0 167 116 185 153 1 0 1 1 1 1 13806 22465 578 21622 52154 60463 60463 1 WWGLQNK Unmodified 930.47119 0.47118627 1148 J3QQ30;J3QPW1;P53810 Pitpna Phosphatidylinositol transfer protein alpha isoform yes no 0 0 0 0 6.5 5.5 1 1 67.421 67.421 2 0.04547 16814 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.748 25.894 56.219 91.01 57.378 76.292 120.33 49.072 53 90 59 75 120 47 1 2 1 2 2 1 33114 22466 1148 21623 52155;52156 60464;60465 60465 2 WWTCFVK Unmodified 1025.4793 0.47930812 1126 H7BWZ3;Q9JM76;D3Z2F7;D3Z2F8 Arpc3 Actin-related protein 2/3 complex subunit 3 yes no 0 0 0 0 4.29 5.2 5 1 1 83.275 83.275 2;3 0.0064941 31541 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.801 54.453 435.96 245.66 213.98 270.49 156.42 303.58 408 241 203 259 157 288 6 3 3 6 3 6 61412 22467 1126 21624 52157;52158;52159;52160;52161;52162;52163 60466;60467;60468;60469;60470;60471;60472;60473;60474 60474 9 WYMQFDDDEKQK Unmodified 1631.6926 0.69260795 1732 P62743;A0A0U1RPS0 Ap2s1 AP-2 complex subunit sigma yes no 0 0 0 1 7.5 0.5 1 1 64.982 64.982 3 0.013985 21701 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 52.576 25.24 89.059 0 0 50.278 0 78.884 83 0 0 46 0 74 1 0 0 1 0 1 5207.7 22468 1732 21625 52164;52165 60475;60476 60475 2 WYNGTDNK Unmodified 996.43011 0.43010932 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 0 0 0 7.5 0.5 1 1 49.089 49.089 2 0.026537 13408 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.376 34.713 128.9 102.73 69.297 95.644 155.94 143.72 121 102 74 93 158 139 2 1 1 1 2 2 11321 22469 1311 21626 52166;52167 60477;60478 60478 2 WYNGTDNK Deamidation (N) 997.41412 0.4141249 1311 P05201;F7ALS6 Got1 Aspartate aminotransferase, cytoplasmic yes no 0 1 0 0 13 0 1 51.628 51.628 3 0.021045 17036 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.954 37.348 0 98.952 0 0 122.24 95.65 0 93 0 0 120 93 0 1 0 0 1 1 8737.8 22470 1311 21626 52168 60479 60479 375 1 WYQMGAYQPFFR Unmodified 1592.7235 0.72345457 2408 Q8BHN3 Ganab Neutral alpha-glucosidase AB yes yes 0 0 0 0 11.5 0.5 1 1 81.343 81.343 2;3 0.012173 25278 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 57.598 38.818 29.952 18.196 0 0 58.576 0 28 19 0 0 56 0 1 1 0 0 1 0 2599 22471 2408 21627 52169;52170 60480;60481 60480 2 WYVVQTNYDR Unmodified 1342.6306 0.63060004 3342 Q9WV54 Asah1 Acid ceramidase;Acid ceramidase subunit alpha;Acid ceramidase subunit beta yes yes 0 0 0 0 9 0 1 62.045 62.045 2 0.012919 18876 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 62.262 43.019 0 29.792 0 39.429 53.779 86.943 0 28 0 37 56 83 0 1 0 1 1 1 4579.2 22472 3342 21628 52171 60482 60482 1 WYYNAAGFNK Deamidation (N) 1233.5455 0.54547343 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 1 0 0 10.5 2.5 1 1 69.384 69.384 3 0.00045523 23149 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.692 67.594 0 106.2 139.15 109.55 185.28 123.7 0 102 139 111 186 121 0 2 2 2 2 2 12368 22473 2919 21629 52172;52173 60483;60484 60483 1022;1023 2 WYYNAAGFNK Unmodified 1232.5615 0.56145784 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 0 11.5 1.12 1 1 1 1 66.908 66.908 2;3 2.4427E-15 16576 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 174.52 98.042 444.49 130.52 512.95 525.06 352.02 416.36 419 137 491 530 357 400 4 2 3 3 2 2 150230 22474 2919 21629 52174;52175;52176;52177 60485;60486;60487;60488;60489 60488 5 YAAELHLVHWNTK Unmodified 1580.81 0.80996139 1296 P00920 Ca2 Carbonic anhydrase 2 yes yes 0 0 0 0 10 2 1 1 1 1 1 1 1 58.052 58.052 4 4.3204E-05 18833 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 96.756 74.558 1115.6 937.03 674.95 1381.4 951.73 1153.8 1046 950 686 1317 979 1100 7 8 5 9 7 7 128710 22475 1296 21630 52178;52179;52180;52181;52182;52183;52184 60490;60491;60492;60493;60494;60495;60496;60497;60498 60490 9 YAAENNR Unmodified 836.37768 0.37767982 1626 P55264 Adk Adenosine kinase yes yes 0 0 0 0 4 0 1 24.115 24.115 2 0.059683 4382 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 73.975 59.979 0 34.048 0 0 0 44.772 0 32 0 0 0 42 0 1 0 0 0 1 7719 22476 1626 21631 52185 60499 60499 1 YAALANLDNIFSAGQGGDQGSGFGTTGK Unmodified 2716.2729 0.27288698 9 A0A087WNV1;A0A087WSR7;A0A087WR52;Q8K2K6 Agfg1 Arf-GAP domain and FG repeat-containing protein 1 yes no 0 0 0 0 9 0 1 87.591 87.591 4 0.031709 30802 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 25.955 12.083 39.117 35.594 67.997 0 29.288 0 37 37 65 0 28 0 1 1 1 0 1 0 3611 22477 9 21632 52186 60500 60500 1 YAALSVDGEDEDEGDDCTE Unmodified 2088.759 0.75896877 2377 Q8BGD9 Eif4b Eukaryotic translation initiation factor 4B yes yes 0 0 0 0 2 0 1 65.088 65.088 3 3.6178E-06 23225 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.944 68.552 20.207 0 30.194 0 19.197 19.706 19 0 28 0 19 19 1 0 1 0 1 1 2750.3 22478 2377 21633 52187 60501 60501 1 YAAVTQFEATDAR Unmodified 1441.6838 0.68375782 1899 Q11011;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 5.67 0.471 1 2 56.749 56.749 2;3 2.1022E-13 18563 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.34 78.434 84.49 20.789 28.859 58.978 93.461 70.887 79 23 28 56 93 69 2 1 1 2 2 2 24226 22479 1899 21634 52188;52189;52190 60502;60503;60504 60503 3 YADDSFTPAFVSTVGIDFK Unmodified 2078.9837 0.98368782 1761;1513 P35276;D3YWL1;D3YW33;P63011 Rab3d;Rab3a Ras-related protein Rab-3D;Ras-related protein Rab-3A no no 0 0 0 0 9 2.89 1 2 1 2 89.88 89.88 3;4 1.3741E-07 35476 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.221 60.342 119.69 65.307 125.53 127.28 143.05 233.67 112 66 121 121 144 222 3 3 4 3 5 5 73970 22480 1513;1761 21635 52191;52192;52193;52194;52195;52196 60505;60506;60507;60508;60509;60510;60511;60512;60513 60511 9 YADDTFTPAFVSTVGIDFK Unmodified 2092.9993 0.99933788 3010 Q9CZT8;A2A7Z6 Rab3b Ras-related protein Rab-3B yes no 0 0 0 0 7 0.816 1 1 1 90.591 90.591 3 5.0342E-05 34216 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 53.773 42.986 9.657 0 8.412 50.534 17.828 39.999 9 0 9 47 19 38 1 0 1 2 1 2 2898.2 22481 3010 21636 52197;52198;52199 60514;60515;60516 60514 3 YADLPGIAR Unmodified 974.51853 0.5185304 2844 Q99KJ8 Dctn2 Dynactin subunit 2 yes yes 0 0 0 0 8.5 2.69 1 1 1 1 57.11 57.11 2 3.3775E-05 18039 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 137.88 84.204 287.16 156.4 115.35 190.17 286.87 133.73 269 167 111 176 287 130 2 2 1 1 2 1 30372 22482 2844 21637 52200;52201;52202;52203 60517;60518;60519;60520 60518 4 YADLSHNR Unmodified 974.45699 0.45699277 3025 Q9D0I9 Rars Arginine--tRNA ligase, cytoplasmic yes yes 0 0 0 0 5 0 1 31.522 31.522 3 0.025912 7066 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 51.066 35.185 0 0 48.135 36.743 44.092 68.032 0 0 46 37 46 65 0 0 1 1 1 1 1881.7 22483 3025 21638 52204 60521 60521 1 YADLTEDQLPSCESLK Unmodified 1867.851 0.85095909 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 0 7.29 3.69 2 1 2 2 67.535 67.535 3;4 1.0407E-06 24232 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 106.52 87.201 704.18 365.37 362.76 325.71 402.25 354.35 660 390 352 310 405 338 7 6 5 5 5 6 195810 22484 3126 21639 52205;52206;52207;52208;52209;52210;52211 60522;60523;60524;60525;60526;60527;60528 60524 7 YADLTEDQLPSCESLKDTIAR Unmodified 2424.1479 0.14786939 3126 Q9DBJ1 Pgam1 Phosphoglycerate mutase 1 yes yes 0 0 0 1 7 3.54 1 1 1 1 69.534 69.534 3 7.0946E-17 25587 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 120.31 91.42 177.86 159.32 292.95 197.73 198.75 250.17 167 158 287 194 204 240 2 3 3 2 2 3 99232 22485 3126 21640 52212;52213;52214;52215 60529;60530;60531;60532 60532 4 YADSSGR Unmodified 754.32458 0.32458162 2261 Q6ZPE2 Sbf1 Myotubularin-related protein 5 yes yes 0 0 0 0 4 0 1 23.331 23.331 2 0.037283 4054 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 80.462 32.719 0 0 0 34.976 0 24.518 0 0 0 32 0 23 0 0 0 1 0 1 2039.4 22486 2261 21641 52216 60533 60533 1 YAEAVGR Unmodified 764.3817 0.38170256 1334 P09411 Pgk1 Phosphoglycerate kinase 1 yes yes 0 0 0 0 7.33 4.03 1 1 1 34.948 34.948 2 0.011634 8713 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.56 67.258 952.37 741.61 931.76 984.39 206.72 916.19 896 772 942 955 219 865 3 4 3 4 1 2 255820 22487 1334 21642 52217;52218;52219 60534;60535;60536;60537 60535 4 YAEDIFGELFNEAHSFSFR Unmodified 2278.0331 0.033097628 2674 Q8R5H6 Wasf1 Wiskott-Aldrich syndrome protein family member 1 yes yes 0 0 0 0 7.5 0.5 1 1 97.501 97.501 3 0.00077493 35004 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.09 37.033 19 0 9 0 0 0 19 0 9 0 0 0 1 0 1 0 0 0 5194.1 22488 2674 21643 52220;52221 60538;60539 60539 2 YAEEDRR Unmodified 937.42536 0.42535829 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 1 4.75 4.82 1 1 1 1 21.817 21.817 3 0.015165 3368 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 86.472 21.905 116.7 139.54 92.865 185.68 200.93 236.25 109 140 93 178 208 227 2 4 1 3 4 4 51791 22489 1533 21644 52222;52223;52224;52225 60540;60541;60542;60543 60540 4 YAEIVHLTLPDGTK Unmodified 1555.8246 0.8246084 1741 P62814 Atp6v1b2 V-type proton ATPase subunit B, brain isoform yes yes 0 0 0 0 7.4 1.02 1 2 1 1 69.008 69.008 3;4 7.1371E-05 23558 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.887 52.657 226.62 138.59 239.99 94.127 296.39 259.11 213 139 231 93 296 251 2 2 2 2 3 3 33029 22490 1741 21645 52226;52227;52228;52229;52230 60544;60545;60546;60547;60548 60546 5 YAELSEEDLK Unmodified 1195.5608 0.56084872 2504 Z4YK42;Q8C5H8 Nadk2 NAD kinase 2, mitochondrial yes no 0 0 0 0 4.5 0.5 1 1 59.653 59.653 2;3 0.00074545 20855 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.692 47.505 108.58 60.253 94.88 35.539 81.201 116.01 102 65 93 37 83 111 2 2 2 1 1 1 7616.2 22491 2504 21646 52231;52232 60549;60550 60549 2 YAFGQEK Unmodified 841.39702 0.39701828 2914 Q9CQ75 Ndufa2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 yes yes 0 0 0 0 7.5 1.12 1 1 1 1 48.833 48.833 2;3 0.014379 13263 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 114.6 66.099 305.97 294.33 264.44 115.15 269.86 190.52 288 298 263 111 266 185 4 3 3 2 2 2 25536 22492 2914 21647 52233;52234;52235;52236 60551;60552;60553;60554 60553 4 YAFPVSNGLPLFAFEYK Deamidation (N) 1962.9768 0.97675195 2217 Q6P572;Q9Z2D1 Mtmr2 Myotubularin-related protein 2 yes no 0 1 0 0 10 0 1 99.48 99.48 3 0.0016425 32497 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 50.387 20.329 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22493 2217 21648 52237 60555 60555 884 1 YAFPVSNGLPLFAFEYK Unmodified 1961.9927 0.99273636 2217 Q6P572;Q9Z2D1 Mtmr2 Myotubularin-related protein 2 yes no 0 0 0 0 11 0 1 96.356 96.356 3 0.03736 31491 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 32.152 16.21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 930.01 22494 2217 21648 52238 60556 60556 1 YAFSFAGAQEACAR Unmodified 1547.6827 0.68271197 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 9 2.35 1 2 1 62.23 62.23 2;3 0.00026703 22082 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 97.175 71.516 168.62 63.671 116.02 98.615 112.84 85.825 158 65 111 93 112 83 4 3 3 2 4 3 19401 22495 2125 21649 52239;52240;52241;52242 60557;60558;60559;60560;60561 60561 5 YAFSGVAFTGAK Unmodified 1217.6081 0.60807369 771 D3Z3R3;P97930 Dtymk Thymidylate kinase yes no 0 0 0 0 10 0 1 68.224 68.224 3 0.00029304 19629 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 69.451 41.282 34.107 0 38.406 32.687 0 39.442 32 0 37 32 0 37 1 0 1 1 0 1 6245.4 22496 771 21650 52243 60562 60562 1 YAFVNWINK Unmodified 1153.592 0.59202969 269;2119 A0A1C7CYV0;B1AX58;Q99K51;Q61233 Pls3;Lcp1 Plastin-3;Plastin-2 no no 0 0 0 0 7.8 5.56 2 2 1 77.159 77.159 2;3 2.3811E-09 20649 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 170.32 102.56 118.62 212.72 241.67 255.23 309.15 28.54 111 205 241 251 306 28 3 4 4 5 5 1 75165 22497 269;2119 21651 52244;52245;52246;52247;52248 60563;60564;60565;60566;60567;60568 60566 6 YAGHVGSVNSIK Unmodified 1230.6357 0.63568542 2519 Q8CBE3;H3BJS1;H3BJR4 Wdr37 WD repeat-containing protein 37 yes no 0 0 0 0 8 0 1 43.351 43.351 3 0.010741 10742 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.154 29.828 0 0 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 4216.9 22498 2519 21652 52249 60569 60569 1 YAGLLEK Unmodified 792.43815 0.43815481 1760 P63005;Q5SW16 Pafah1b1 Platelet-activating factor acetylhydrolase IB subunit alpha yes no 0 0 0 0 8 1 1 1 59.617 59.617 2 0.021687 17652 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.12 23.482 69.148 0 100.28 219.94 335.53 230.39 65 0 93 205 338 222 1 0 1 1 2 1 21521 22499 1760 21653 52250;52251 60570;60571 60571 2 YAGLTFPK Unmodified 895.48035 0.48035398 2327 Q80W82;Q3TQZ7;Q8C9D4;Q80W80;E9QN59;Q61831 Mapk10 Mitogen-activated protein kinase;Mitogen-activated protein kinase 10 yes no 0 0 0 0 10 0 1 64.388 64.388 2 0.003264 17846 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 124.08 74.721 121.21 78.126 120.42 92.427 108.72 0 114 83 120 93 108 0 1 1 1 1 1 0 13374 22500 2327 21654 52252 60572 60572 1 YAGSALQYEDVGTAVQNLQK Unmodified 2154.0593 0.059312378 2953 Q9CR26 Vta1 Vacuolar protein sorting-associated protein VTA1 homolog yes yes 0 0 0 0 6 0 1 71.698 71.698 3 1.4481E-11 25596 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 104.84 88.086 0 19.751 27.822 28.946 0 0 0 19 28 28 0 0 0 1 1 1 0 0 4366 22501 2953 21655 52253 60573 60573 1 YAHVVLR Unmodified 856.49192 0.49192172 340 F6YVP7;A0A1Y7VKY1;P62270;S4R1N6 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 10 2.16 1 1 1 37.51 37.51 3 0.0030374 8252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.935 39.868 39.701 39.368 0 50.278 0 29.848 37 37 0 46 0 28 1 1 0 1 0 1 11921 22502 340 21656 52254;52255;52256 60574;60575;60576 60574 3 YAIAVNDLGTEYVHR Unmodified 1719.858 0.8580338 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 0 7.4 2.87 1 2 1 1 61.327 61.327 3;4 2.9645E-32 20714 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 162.41 136.28 167.42 359.87 85.04 29.902 225.86 214.29 157 353 83 28 222 204 2 6 1 1 4 3 64490 22503 789 21657 52257;52258;52259;52260;52261 60577;60578;60579;60580;60581;60582 60579 6 YAIAVNDLGTEYVHR Deamidation (N) 1720.842 0.84204938 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 1 0 0 5 0 1 61.882 61.882 3 0.015336 21607 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 43.024 12.966 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22504 789 21657 52262 60583 60583 209 1 YAICSALAASALPALVMSK Unmodified 1936.0162 0.016190696 3093 Q9D8E6 Rpl4 60S ribosomal protein L4 yes yes 0 0 0 0 5.6 5.64 3 1 1 94.163 94.163 3;4 3.7733E-36 33428 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 149.97 132.82 74.336 54.502 120.13 139.79 61.944 78.968 70 55 119 135 64 75 4 4 5 6 4 4 16673 22505 3093 21658 52263;52264;52265;52266;52267 60584;60585;60586;60587;60588;60589;60590;60591;60592 60589 9 YALNHPDTVEGLVLINIDPNAK Unmodified 2405.2591 0.25907482 3277;377 Q9QYG0;A0A2I3BQR5;A0A2I3BPW0;A0A2I3BPL1 Ndrg2 Protein NDRG2 no no 0 0 0 0 6.75 0.829 2 1 1 80.58 80.58 3;4 2.5331E-18 28917 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 109.85 89.038 99.261 55.865 93.855 89.679 28.291 147.37 93 56 93 84 28 139 3 2 3 2 1 4 24305 22506 3277;377 21659 52268;52269;52270;52271 60593;60594;60595;60596 60595 4 YALQSQQR Unmodified 992.50394 0.50394297 2472 Q8BWT1 Acaa2 3-ketoacyl-CoA thiolase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 35.813 35.813 2 0.0061559 7333 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.12 65.999 29.882 71.401 0 94.238 103.45 120.7 28 69 0 88 107 116 1 2 0 2 2 2 10179 22507 2472 21660 52272;52273 60597;60598 60598 2 YALTFAEAQEACR Unmodified 1528.698 0.69802768 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 6.33 0.471 2 1 62.329 62.329 2;3 4.1142E-16 21196 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 142.89 117.66 0 39.601 49.691 29.528 153.2 37.808 0 38 47 28 149 37 0 2 1 1 3 1 18971 22508 144 21661 52274;52275;52276 60599;60600;60601 60600 3 YALTPLLCNACLR Deamidation (N) 1564.7742 0.77416951 3436 yes yes 0 1 0 0 13 0 1 39.627 39.627 4 0.044336 11212 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 41.48 9.0412 393.19 332.06 0 274.34 0 560.72 368 337 0 251 0 526 1 1 0 1 0 1 163020 + 22509 3436 21662 52277 60602 60602 1155 1 YALVWGTSTK Unmodified 1124.5866 0.58660996 3264 Q9QXB9 Drg2 Developmentally-regulated GTP-binding protein 2 yes yes 0 0 0 0 11 0 1 66.715 66.715 2 0.0036254 18526 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.755 39.566 0 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 5167 22510 3264 21663 52278 60603 60603 1 YALYDASFETK Unmodified 1306.6081 0.60813326 3301 Q9R0P5 Dstn Destrin yes yes 0 0 0 0 8.5 2.69 1 1 1 1 67.037 67.037 2;3 9.0088E-14 23393 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 155.5 118.97 177.39 265.54 407.19 367.15 346.82 504.98 167 259 407 361 362 483 2 3 4 3 3 4 79114 22511 3301 21664 52279;52280;52281;52282 60604;60605;60606;60607 60604 4 YALYDATYETK Unmodified 1336.6187 0.61869795 1410;1549 P45591;P18760;F8WGL3 Cfl2;Cfl1 Cofilin-2;Cofilin-1 no no 0 0 0 0 7.43 2.44 1 2 2 1 1 61.859 61.859 2;3 5.8978E-43 21011 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 205.09 158.63 2472.7 2257.6 3247.7 2549.2 2646 3726.9 2330 2308 3237 2523 2717 3566 10 7 10 9 9 10 452170 22512 1549;1410 21665 52283;52284;52285;52286;52287;52288;52289 60608;60609;60610;60611;60612;60613;60614;60615;60616;60617;60618 60609 11 YANVIAYDHSR Unmodified 1307.6258 0.62584901 568;642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;A2A8L5;F6Y3V0;F6S1X8;B0V2N1 Ptprd;Ptprf;Ptprs Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase F;Receptor-type tyrosine-protein phosphatase S no no 0 0 0 0 6.5 0.5 1 1 45.007 45.007 3 0.00038826 12203 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 83.045 17.203 29.904 27.776 68.711 76.787 0 118.33 28 28 65 74 0 111 1 1 1 2 0 2 9137.5 22513 642;568 21666 52290;52291 60619;60620 60620 2 YAPGYNAEVGDK Unmodified 1282.583 0.58298115 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 13 0 2 49.813 49.813 2;3 1.3128E-06 16256 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 90.689 38.411 169.76 167.3 0 168.77 208.77 0 159 168 0 158 207 0 1 1 0 1 1 0 13629 22514 2859 21667 52292;52293 60621;60622 60622 2 YAPGYNAEVGDKWIWLK Unmodified 2009.0047 0.0046980325 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 1 10 0 1 76.964 76.964 4 0.04399 23919 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 33.301 19.673 68.98 63.254 75.028 44.419 73.752 46.931 65 65 75 46 74 46 1 1 1 1 1 1 14546 22515 2859 21668 52294 60623 60623 1 YAPLGWSK Unmodified 920.4756 0.47560295 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 0.816 1 1 1 63.269 63.269 2 0.010308 17458 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 98.523 54.076 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22516 3204 21669 52295;52296;52297 60624;60625;60626 60625 3 YAPLHLVPLIER Unmodified 1419.8238 0.82382054 2057;2282 Q7TMB8;A0A0R4J119;Q5SQX6;F6QD74 Cyfip1;Cyfip2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 no no 0 0 0 0 10.3 2.05 1 1 1 68.905 68.905 3 0.00030454 25284 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.261 32.149 78.91 102.72 29.073 0 153.52 67.387 74 102 28 0 148 65 2 3 1 0 2 2 45533 22517 2282;2057 21670 52298;52299;52300 60627;60628;60629 60629 3 YAPSGFYIASGDISGK Unmodified 1631.7831 0.78313752 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 8.8 2.23 2 1 1 1 70.664 70.664 2;3;4 2.0414E-18 24340 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 98.902 76.023 368.64 227.32 67.795 427.21 494.01 485.86 345 224 65 402 507 469 4 2 2 3 3 3 87850 22518 1263 21671 52301;52302;52303;52304;52305 60630;60631;60632;60633;60634 60631 5 YAPTTTPSPEDGFEVQPLHPDK Unmodified 2425.1438 0.14377029 898 E9Q517;E9Q3V0;P28571 Slc6a9 Transporter;Sodium- and chloride-dependent glycine transporter 1 yes no 0 0 0 0 4 0 1 63.485 63.485 4 0.065279 22552 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 24.548 10.387 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1884.8 22519 898 21672 52306 60635 60635 1 YAQDDFVLDHSECR Unmodified 1753.7366 0.73659803 67 A0A0A6YX71;Q6PGN3;A0A0A6YWI6;A0A0A6YX33 Dclk2 Serine/threonine-protein kinase DCLK2 yes no 0 0 0 0 4 0 1 52.164 52.164 3 0.00050109 17313 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.704 53.728 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22520 67 21673 52307 60636 60636 1 YAQTGEIDGELLR Unmodified 1463.7256 0.72562264 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 4 0 1 60.685 60.685 2 0.00046677 21317 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.53 43.821 20.33 11.397 0 0 19.874 0 19 12 0 0 19 0 1 1 0 0 1 0 4330.7 22521 2208 21674 52308 60637 60637 1 YASENVNK Unmodified 923.43486 0.43486035 1742;2065;3040 P62821;Q5SW88;Q5SW87;Q9D1G1 Rab1A;Rab1;Rab1b Ras-related protein Rab-1A;Ras-related protein Rab-1B no no 0 0 0 0 8 3.56 1 1 1 38.609 38.609 2 0.00011176 10065 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 159.46 111.34 324.92 290.41 538.6 451.79 539.29 352.88 306 302 534 452 547 342 2 3 3 3 3 2 43138 22522 1742;2065;3040 21675 52309;52310;52311 60638;60639;60640 60639 3 YASICQQNGIVPIVEPEILPDGDHDLK Deamidation (N) 3020.4801 0.48010256 1309;1308 P05063;P05064;A6ZI44;D3YWI1 Aldoc;Aldoa Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 1 0 0 5.71 3.01 3 3 1 81.344 81.344 3;4;5 4.6768E-18 30419 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.237 65.916 139.84 67.147 149.61 29.466 187.52 204.15 131 65 140 28 185 196 4 2 4 1 5 5 50009 22523 1308;1309 21676 52312;52313;52314;52315;52316;52317;52318 60641;60642;60643;60644;60645;60646;60647 60641 365 7 YASICQQNGIVPIVEPEILPDGDHDLK Unmodified 3019.4961 0.49608698 1309;1308 P05063;P05064;A6ZI44;D3YWI1 Aldoc;Aldoa Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 0 7.5 3.2 1 2 1 81.059 81.059 4;5 9.6907E-13 29968 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.845 56.916 99.195 94.773 151.05 122.71 72.036 116.27 93 93 149 120 74 111 3 2 3 3 2 2 22372 22524 1308;1309 21676 52319;52320;52321;52322 60648;60649;60650;60651 60648 4 YASICQQNGIVPIVEPEILPDGDHDLKR Deamidation (N) 3176.5812 0.58121359 1309;1308 P05063;P05064;A6ZI44;D3YWI1 Aldoc;Aldoa Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 1 0 1 6.43 2.85 3 4 3 2 2 75.003 75.003 4;5 5.4465E-27 27956 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.39 100.19 485.34 597.47 699.46 594.68 608.33 534.33 456 594 698 576 613 510 12 14 15 12 13 12 369890 22525 1308;1309 21677 52323;52324;52325;52326;52327;52328;52329;52330;52331;52332;52333;52334;52335;52336 60652;60653;60654;60655;60656;60657;60658;60659;60660;60661;60662;60663;60664;60665;60666;60667;60668;60669;60670;60671 60661 365 20 YASICQQNGIVPIVEPEILPDGDHDLKR Unmodified 3175.5972 0.59719801 1309;1308 P05063;P05064;A6ZI44;D3YWI1 Aldoc;Aldoa Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase no no 0 0 0 1 8.33 3.3 2 1 73.542 73.542 4;5 1.0237E-24 26371 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 89.039 66.338 119.48 0 117.16 56.003 148.23 116.54 112 0 111 56 148 112 4 0 3 2 4 3 36377 22526 1308;1309 21677 52337;52338;52339 60672;60673;60674;60675 60672 4 YASMINK Unmodified 825.40547 0.40547447 2916 Q9CQ91;D3Z670 Ndufa3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 yes no 0 0 0 0 9 0 1 51.962 51.962 2 0.026957 14010 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 89.369 35.815 0 0 0 148 0 0 0 0 0 148 0 0 0 0 0 1 0 0 15015 22527 2916 21678 52340 60676 60676 1 YATALYSAASK Unmodified 1144.5764 0.57643921 3110 Q9DB20;A0A338P776;F6XVM5 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 9.14 3.68 1 1 1 1 1 1 1 58.168 58.168 2;3 5.5378E-20 15177 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 172.27 113.46 238.35 271.52 501.53 346.27 480.5 497.11 224 273 484 346 481 474 4 5 6 5 4 6 181960 22528 3110 21679 52341;52342;52343;52344;52345;52346;52347 60677;60678;60679;60680;60681;60682;60683;60684 60681 8 YATLATVSR Unmodified 980.5291 0.52909508 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 10 2.16 1 1 1 48.373 48.373 2 0.0034033 13291 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.709 67.78 158.1 62.096 66.159 69.522 80.995 145.86 148 65 65 65 83 139 2 1 1 1 1 2 16117 22529 3204 21680 52348;52349;52350 60685;60686;60687 60685 3 YATQLVWGR Unmodified 1092.5716 0.5716286 3297 Q9QZX7 Srr Serine racemase yes yes 0 0 0 0 10 0 1 62.127 62.127 2 3.6126E-05 16964 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 134.77 76.954 0 200.24 242.26 0 255.03 218.71 0 192 235 0 251 212 0 1 1 0 1 1 24591 22530 3297 21681 52351 60688 60688 1 YAVDTVLR Unmodified 935.50763 0.50763136 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 9.5 3.5 1 1 54.88 54.88 2 0.011817 17933 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.9 29.242 543.85 404.45 683.7 538.02 667.2 563.8 512 418 679 541 680 545 2 2 3 3 3 2 94936 22531 2125 21682 52352;52353 60689;60690;60691 60690 3 YAVDYSWYVDTILNLIR Unmodified 2103.0677 0.06769222 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 11 0 1 117 117 3 0.0052132 36979 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.412 31.073 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22532 1400 21683 52354 60692 60692 1 YAVDYTWYVDTILNLIR Unmodified 2117.0833 0.083342284 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 13 0 1 118.03 118.03 3 0.01165 45172 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 38.889 27.275 0 5.2348 5.0959 0 5.0519 5.1858 0 5 5 0 5 5 0 1 1 0 1 1 757.39 22533 1401 21684 52355 60693 60693 1 YAVLYQPLFDK Unmodified 1355.7125 0.71253876 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 0 10.8 1.33 1 1 2 1 80.217 80.217 2;3 1.7614E-07 24760 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.83 74.034 237.06 99.986 108.45 283.88 253.66 122.74 222 102 111 270 259 120 4 2 2 4 4 2 30745 22534 833 21685 52356;52357;52358;52359;52360 60694;60695;60696;60697;60698;60699 60697 6 YAVLYQPLFDKR Unmodified 1511.8136 0.81364979 833 Q3TF41;Q8BSH9;E9PW66;P28656 Nap1l1 Nucleosome assembly protein 1-like 1 yes no 0 0 0 1 11.5 0.5 1 1 70.163 70.163 3 3.1913E-18 17822 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 148.18 127.52 0 136.11 132.49 438.22 410.82 178.02 0 130 130 408 412 167 0 1 1 1 1 1 46185 22535 833 21686 52361;52362 60700;60701 60701 2 YAVNSIK Unmodified 793.4334 0.43340378 589 B1ATZ0;B1ATZ1;Q3UMA3;Q99LI8;B1ATY9 Hgs Hepatocyte growth factor-regulated tyrosine kinase substrate yes no 0 0 0 0 8.5 0.5 1 1 48.609 48.609 2 0.016903 13198 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.212 37.296 93 0 0 0 0 0 93 0 0 0 0 0 1 0 0 0 0 0 6041.9 22536 589 21687 52363;52364 60702;60703 60702 2 YAVWFGGSMLASTPEFYQVCHTK Unmodified 2678.2298 0.2297653 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 11 0 1 84.178 84.178 4 5.8162E-10 26351 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 66.644 31.629 0 69.16 0 0 0 88.478 0 65 0 0 0 83 0 1 0 0 0 1 4815.2 22537 2836 21688 52365 60704 60704 1 YAVYWDELPSEVR Unmodified 1625.7726 0.77257283 261 A0A1B0GSA5;Q80Y98;A0A1B0GS27;A0A1B0GSV3 Ddhd2 Phospholipase DDHD2 yes no 0 0 0 0 6 0 1 75.662 75.662 3 0.013205 27448 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 46.069 24.512 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22538 261 21689 52366 60705 60705 1 YAYDSAFHPDTGEK Unmodified 1599.6842 0.68415175 2832 Q99JR1 Sfxn1 Sideroflexin-1 yes yes 0 0 0 0 4 0 1 51.971 51.971 3 0.013842 17223 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 42.345 25.661 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22539 2832 21690 52367 60706 60706 1 YAYLLESTMNEYIEQR Unmodified 2021.9404 0.9404428 1104;2286 Q7TNB5;P23818;F6YNQ1;G5E8H1 Gria1;Gria2 Glutamate receptor 1 no no 0 0 0 0 8.5 2.69 1 1 1 1 88.308 88.308 3 1.6897E-17 32039 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 130.98 107.97 59.851 38.725 78.319 28.447 56.262 79.438 56 37 75 28 56 75 2 2 3 2 2 3 17831 22540 2286;1104 21691 52368;52369;52370;52371 60707;60708;60709;60710 60709 4 YCFPFGRPEGALK Unmodified 1540.7497 0.74966932 2301;365;912 Q80TJ1;K4DI76;J3QJW3;A0A286YDH6;S4R1C6;E9Q5C0;E9Q835;Q8BYR5;A0A0M3HEP6;F6SH36 Cadps;Cadps2 Calcium-dependent secretion activator 1;Calcium-dependent secretion activator 2 no no 0 0 0 1 10 0.816 1 1 1 64.051 64.051 3 0.002174 17793 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.827 44.817 0 229.82 0 460.3 279.13 434.42 0 216 0 437 285 415 0 1 0 3 1 2 57534 22541 2301;365;912 21692 52372;52373;52374 60711;60712;60713 60712 3 YCFPNYVGRPK Unmodified 1399.6707 0.67069072 2672;1691 P61164;Q8R5C5 Actr1a;Actr1b Alpha-centractin;Beta-centractin no no 0 0 0 1 11.5 1.12 1 1 1 1 53.997 53.997 3 3.5476E-13 13363 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 147.41 123.12 445.62 310.11 403.31 444.87 638.99 504.83 419 321 405 437 647 486 4 3 2 3 4 3 76090 22542 1691;2672 21693 52375;52376;52377;52378 60714;60715;60716;60717 60714 4 YCGDYDSFFESK Unmodified 1516.5817 0.58166052 34 A0A087WS96;Q8BG73 Sh3bgrl2 SH3 domain-binding glutamic acid-rich-like protein;SH3 domain-binding glutamic acid-rich-like protein 2 yes no 0 0 0 0 6 1 1 1 70.693 70.693 3 0.00020334 25657 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.76 54.379 0 47.146 107.54 29.921 112.13 75.684 0 46 102 28 111 74 0 1 1 1 2 2 8677.7 22543 34 21694 52379;52380 60718;60719 60718 2 YCLFGNNVTLASK Unmodified 1485.7286 0.72859953 1036 F8VQK3 Gucy1a2 yes yes 0 0 0 0 10.5 0.5 1 1 71.663 71.663 3 0.00012587 21399 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.326 54.748 128.49 87.748 151.93 75.721 100.6 145.3 121 93 149 74 102 139 2 2 2 1 1 2 11308 22544 1036 21695 52381;52382 60720;60721 60720 2 YCLFGNTVNLTSR Unmodified 1543.7453 0.74531222 1221 Q80YP4;O54865 Gucy1b3 Guanylate cyclase soluble subunit beta-1 yes no 0 0 0 0 10.5 0.5 1 1 70.322 70.322 2 0.00047402 20742 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83.862 58.476 0 19.892 19.365 0 67.031 76.971 0 19 19 0 65 74 0 1 1 0 1 2 6956.6 22545 1221 21696 52383;52384 60722;60723 60722 2 YCNTWPMAISMLASK Unmodified 1771.8096 0.80956874 2176 Q64442 Sord Sorbitol dehydrogenase yes yes 0 0 0 0 11 0 1 87.371 87.371 3 0.042578 27791 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 33.307 16.879 29.923 0 20.407 0 0 29.848 28 0 19 0 0 28 1 0 1 0 0 1 1826.2 22546 2176 21697 52385 60724 60724 1 YCTFNDDIQGTASVAVAGLLAALR Unmodified 2525.2584 0.25842289 1317 P06801;Q3TQP6 Me1 NADP-dependent malic enzyme;Malic enzyme yes no 0 0 0 0 10.5 0.5 1 1 107.02 107.02 3 1.4041E-16 33832 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 95.138 83.35 0 0 6.2164 6.1875 6 0 0 0 6 6 6 0 0 0 1 1 1 0 2540.8 22547 1317 21698 52386;52387 60725;60726 60725 2 YCVQLSQIQAQISALEEQLQQIR Unmodified 2745.412 0.41196342 659 CON__P13645 yes yes 0 0 0 0 11 2 1 1 104.38 104.38 3 1.0885E-18 36758 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.83 97.221 5.365 0 0 5.465 0 6.396 5 0 0 5 0 6 1 0 0 1 0 1 2321.8 + 22548 659 21699 52388;52389 60727;60728 60727 2 YCYICPDIVR Unmodified 1357.6159 0.61587795 2170 Q641P0 Actr3b Actin-related protein 3B yes yes 0 0 0 0 7.5 0.5 1 1 63.248 63.248 2 0.0010894 20761 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 80.239 65.088 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22549 2170 21700 52390;52391 60729;60730 60729 2 YDADLENK Unmodified 966.42944 0.42944062 3315 Q9R1Q8 Tagln3 Transgelin-3 yes yes 0 0 0 0 6.17 3.24 1 1 1 2 1 49.276 49.276 2;3 0.0012661 15698 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 140.5 72.08 725.52 495.65 916.91 697.51 587.46 915.99 683 518 907 694 598 875 5 4 6 5 5 6 97367 22550 3315 21701 52392;52393;52394;52395;52396;52397 60731;60732;60733;60734;60735;60736 60736 6 YDAFCFTSALAGQVFFVPGR Unmodified 2252.0725 0.072460022 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 11 0 1 99.412 99.412 3 6.1581E-07 32774 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.83 47.951 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1479.7 22551 3194 21702 52398 60737 60737 1 YDAIFDSLSPVDGFLSGDK Unmodified 2044.963 0.96295238 1006 F6W2Q5;Q5JC28;H3BK65;P42567 Eps15 Epidermal growth factor receptor substrate 15 yes no 0 0 0 0 6 0 1 98.637 98.637 3 4.3374E-06 36915 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.567 54.735 0 0 9.3245 9.2813 0 0 0 0 9 9 0 0 0 0 1 1 0 0 492.3 22552 1006 21703 52399 60738 60738 1 YDCEAASR Unmodified 970.38144 0.38144457 1180 O35136 Ncam2 Neural cell adhesion molecule 2 yes yes 0 0 0 0 2.5 0.5 1 1 30.386 30.386 2 0.037733 7260 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.625 41.663 0 77.874 51.582 97.38 101.56 19.168 0 74 56 93 102 19 0 1 1 1 2 1 8545.6 22553 1180 21704 52400;52401 60739;60740 60739 2 YDDDTVLVSLLK Unmodified 1379.7184 0.718412 52 S4R2D5;S4R2T5;A0A0A0MQN4;Q9D906;S4R2P7;S4R1T0 Atg7 Ubiquitin-like modifier-activating enzyme ATG7 yes no 0 0 0 0 6 0 1 86.718 86.718 3 0.0047974 32481 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 51.218 34.994 0 20.216 0 0 0 9.594 0 19 0 0 0 9 0 1 0 0 0 1 1380.5 22554 52 21705 52402 60741 60741 1 YDDEDISEDIK Unmodified 1340.562 0.56197093 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 2.5 0.5 2 2 59.138 59.138 2;3 5.814E-08 20370 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 120.09 87.091 128.82 82.951 124.97 87.282 131.47 87.401 121 84 121 84 130 84 4 3 4 3 4 3 18706 22555 65 21706 52403;52404;52405;52406 60742;60743;60744;60745;60746 60744 5 YDDIEETNYFQQASELAK Unmodified 2162.9644 0.96440894 2736 Q91VD9;A0A087WQ77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 0 0 0 4.67 1.25 1 1 1 78.053 78.053 3;4 4.3487E-05 29367 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 63.918 52.973 20.33 67.89 85.63 0 46.807 88.208 19 65 83 0 46 84 1 2 3 0 1 3 8207.4 22556 2736 21707 52407;52408;52409 60747;60748;60749 60747 3 YDDIEETNYFQQASELAK Deamidation (N) 2163.9484 0.94842452 2736 Q91VD9;A0A087WQ77 Ndufs1 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial yes no 0 1 0 0 6 4.06 1 2 1 77.94 77.94 3 2.9095E-07 28807 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.311 66.462 98.773 179.06 92.625 46.877 72.254 87.252 93 176 93 46 74 83 2 3 2 1 2 1 33158 22557 2736 21707 52410;52411;52412;52413 60750;60751;60752;60753 60751 986 4 YDDMAAAMK Unmodified 1014.4151 0.41505288 1706;2944 Q9CQV8;A2A5N1;P61982 Ywhab;Ywhag 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed no no 0 0 0 0 7.75 3.11 1 1 1 1 57.352 57.352 3 0.00060807 19572 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 92.062 53.706 507.2 224.21 513.88 322.29 412.45 534.02 476 240 503 325 426 512 3 3 4 3 4 4 64700 22558 2944;1706 21708 52414;52415;52416;52417 60754;60755;60756;60757 60754 4 YDDMAACMK Unmodified 1103.4086 0.4085873 1773 P63101;A0A2I3BQ03;D3YXN6;D3YXF4 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 7.75 3.11 1 1 1 1 54.845 54.845 2;3 0.0008403 17683 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.308 67.546 458.93 356.99 471.08 356.83 420.74 490.08 432 372 472 353 434 471 4 4 4 3 4 4 48029 22559 1773 21709 52418;52419;52420;52421 60758;60759;60760;60761 60759 4 YDDMASAMK Unmodified 1030.41 0.4099675 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 9 4 1 1 55.187 55.187 3 0.0049748 18601 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 61.161 21.857 48.978 174.39 0 160.23 81.655 156.5 46 167 0 148 83 149 1 2 0 2 1 2 10012 22560 1797 21710 52422;52423 60762;60763 60762 2 YDDMATCMK Unmodified 1133.4192 0.41915198 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 5 0 1 53.781 53.781 2 0.0081895 17788 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 77.677 48.33 49.273 16.894 0 0 57.278 37.808 46 19 0 0 56 37 1 1 0 0 1 1 2750.7 22561 1005 21711 52424 60764 60764 1 YDDMLVVPIIENTPEEK Unmodified 2003.9762 0.9761596 3354 Q9WVQ5 Apip Methylthioribulose-1-phosphate dehydratase yes yes 0 0 0 0 6 0 1 80.149 80.149 3 0.021073 29509 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 36.638 6.0949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22562 3354 21712 52425 60765 60765 1 YDDPEVQK Unmodified 992.44509 0.44509068 1533 P38647 Hspa9 Stress-70 protein, mitochondrial yes yes 0 0 0 0 3 0 1 45.25 45.25 2 0.016577 14422 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 81.548 42.005 48.999 0 60.345 0 67.031 27.935 46 0 56 0 65 28 1 0 1 0 1 1 3473.3 22563 1533 21713 52426 60766 60766 1 YDDYSSSR Unmodified 991.3883 0.38830408 385;3339 A0A2I3BRL8;Q91VM5;S4R1F6;Q9WV02 Rbmxl1;Rbmx RNA binding motif protein, X-linked-like-1;RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed no no 0 0 0 0 4 0 1 34.361 34.361 2 0.017503 8855 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 77.072 60.869 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22564 385;3339 21714 52427 60767 60767 1 YDEAASYIQSK Unmodified 1273.5826 0.5826468 1330 P08752 Gnai2 Guanine nucleotide-binding protein G(i) subunit alpha-2 yes yes 0 0 0 0 6 0 1 58.904 58.904 3 1.7243E-06 19579 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 88.441 53.554 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22565 1330 21715 52428 60768 60768 1 YDEEFQR Unmodified 985.41412 0.4141249 3186 Q9ERK4;E9QAX7 Cse1l Exportin-2 yes no 0 0 0 0 2 0 1 42.988 42.988 2 0.036372 13139 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 81.191 40.309 29.679 27.151 38.255 0 66.701 37.539 28 28 37 0 65 37 1 1 1 0 1 1 5258.6 22566 3186 21716 52429 60769 60769 1 YDELYSSLTTLLAAGSQLDTTR Unmodified 2417.1962 0.19619979 496 A2AN08 Ubr4 E3 ubiquitin-protein ligase UBR4 yes yes 0 0 0 0 9.5 0.5 1 1 105.17 105.17 3 6.4744E-15 33562 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 82.362 70.74 8.574 1.984 0 3.279 6.276 0 8 2 0 3 6 0 2 1 0 1 1 0 2757.4 22567 496 21717 52430;52431 60770;60771 60771 2 YDEMVESMK Unmodified 1130.4624 0.46239701 1715 P62259;D6REF3 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 5.5 0.5 1 1 62.834 62.834 2;3 0.0016461 21346 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 99.653 66.812 39.564 56.916 0 99.405 119.31 47.749 37 56 0 93 120 46 1 2 0 2 2 1 18967 22568 1715 21718 52432;52433 60772;60773 60773 2 YDEPLGK Unmodified 820.39668 0.39668393 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 9 4 1 1 49.513 49.513 2;3 0.029079 15905 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 58.577 35.021 20.134 28.121 129.13 0 56.56 186 19 28 121 0 55 176 1 1 2 0 1 2 7794.1 22569 3039 21719 52434;52435 60774;60775 60774 2 YDGATIVPGDQGADYQHFIQQCTDDVR Unmodified 3068.357 0.35702732 2931 Q9CQI6;A0A1D5RLP1 Cotl1 Coactosin-like protein yes no 0 0 0 0 6.2 3.43 2 2 1 69.569 69.569 3;4 3.468E-17 25138 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 76.198 64.781 59.771 48.643 29.249 19.024 19.874 38.848 56 47 28 19 19 37 2 2 1 1 1 2 70219 22570 2931 21720 52436;52437;52438;52439;52440 60776;60777;60778;60779;60780 60777 5 YDGIILPGK Unmodified 974.54368 0.54368251 855 E9PZB3;E9PYL9;Q9CXW4 Gm5093;Gm10036;Rpl11 60S ribosomal protein L11 yes no 0 0 0 0 10 3 1 1 67.104 67.104 2 0.00091902 22659 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.04 69.058 227.2 82.554 156.77 181.63 73.894 127.92 213 84 158 176 74 120 2 1 2 2 1 1 13012 22571 855 21721 52441;52442 60781;60782 60781 2 YDGQVAVFGSDFQEK Unmodified 1688.7682 0.76821573 1876 Q02053 Uba1 Ubiquitin-like modifier-activating enzyme 1 yes yes 0 0 0 0 7 3.03 2 2 1 70.187 70.187 2;3;4 7.7389E-08 25945 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.29 91.074 207.97 47.49 359.76 216.3 136.45 282.86 195 46 345 214 141 269 3 1 5 3 1 4 64602 22572 1876 21722 52443;52444;52445;52446;52447 60783;60784;60785;60786;60787;60788 60788 6 YDHCVGEK Unmodified 1006.4178 0.41783007 3246 Q9JM14;A2A9X5 Nt5c 5'(3')-deoxyribonucleotidase, cytosolic type yes no 0 0 0 0 5.5 0.5 1 1 34.656 34.656 3 0.007349 8623 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 68.735 45.905 78.295 48.944 186 90.563 93.965 175.34 74 46 176 93 93 167 1 1 1 1 1 2 9455 22573 3246 21723 52448;52449 60789;60790 60789 2 YDHLDPAEMER Unmodified 1374.5874 0.5874146 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 3.5 0.5 1 1 48.375 48.375 3 0.0015589 15892 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 61.233 43.865 59.686 24.992 46.354 36.317 72.402 97.072 56 28 46 37 74 93 1 1 1 1 1 1 12756 22574 1581 21724 52450;52451 60791;60792 60791 2 YDIDMTK Unmodified 884.39497 0.39496937 2614 Q8K3J1 Ndufs8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial yes yes 0 0 0 0 5 0 1 56.192 56.192 2 0.059848 18929 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 73.931 33.886 0 47.356 94.989 62.765 139.24 95.165 0 46 93 65 139 93 0 1 1 1 1 1 4626.7 22575 2614 21725 52452 60793 60793 1 YDILLTAVK Unmodified 1034.6012 0.60119739 1162 Q3TMN1;Q3UI33;O08663;M0QW69 Metap2 Methionine aminopeptidase 2;Methionine aminopeptidase yes no 0 0 0 0 9 0 1 78.362 78.362 2 0.020378 26563 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.711 38.54 88.362 52.411 72.689 85.048 71.187 67.259 83 56 74 83 74 65 1 1 1 1 1 1 3963.4 22576 1162 21726 52453 60794 60794 1 YDLASHLGIR Unmodified 1143.6037 0.60365701 2208 Q6NZL0 Soga3 Protein SOGA3 yes yes 0 0 0 0 9 0 1 57.331 57.331 3 0.033372 16665 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.161 19.141 0 0 0 0 56.251 67.685 0 0 0 0 56 65 0 0 0 0 1 1 3472.3 22577 2208 21727 52454 60795 60795 1 YDLDFKSPDDPSR Unmodified 1553.6998 0.69980182 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 1 9 4 1 1 57.775 57.775 3 0.0075994 19738 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 53.001 24.455 59.091 72.985 105.69 0 64.649 97.293 56 74 102 0 65 93 1 1 1 0 1 1 8801.2 22578 1398 21728 52455;52456 60796;60797 60796 2 YDLFSEDYDTSEK Unmodified 1610.6624 0.66241326 927 E9Q7S0;F7BQW7;D3Z656;Q8CHC4 Synj1 Synaptojanin-1 yes no 0 0 0 0 4.5 0.5 1 1 70.641 70.641 2 9.9904E-12 25706 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.64 72.79 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 2561.2 22579 927 21729 52457;52458 60798;60799 60799 2 YDLGQVIK Unmodified 934.51238 0.51238239 1986 Q3UHL1;A0A0A6YW88;A0A0A6YXI7;A0A0A6YW08 Camkv CaM kinase-like vesicle-associated protein yes no 0 0 0 0 10.5 2.5 1 1 63.074 63.074 2 0.008163 20131 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 103.56 31.078 206.5 58.827 228.69 155.91 109.53 204.74 194 65 222 157 111 195 2 1 2 2 1 2 14754 22580 1986 21730 52459;52460 60800;60801 60800 2 YDLLCLEGLAR Unmodified 1321.67 0.67002202 3329 Q9WUA2;A0A087WS80 Farsb Phenylalanine--tRNA ligase beta subunit yes no 0 0 0 0 7 0 1 80.45 80.45 2 0.005751 28814 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.278 32.527 29.809 27.512 16.15 58.513 33.997 58.726 28 28 19 55 37 56 1 1 1 1 1 1 2746 22581 3329 21731 52461 60802 60802 1 YDPGALVIPFSGALELK Unmodified 1788.9662 0.96618726 2999 Q9CZ30 Ola1 Obg-like ATPase 1 yes yes 0 0 0 0 8.5 0.5 1 1 95.074 95.074 3 3.3906E-05 34328 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.481 30.867 0 24.472 0 15.302 0 0 0 23 0 14 0 0 0 1 0 1 0 0 1112.1 22582 2999 21732 52462;52463 60803;60804 60803 2 YDPTIEDFYR Unmodified 1317.5877 0.58773217 1695;2346;2460 Q80ZJ1;P61226;Q8BU31 Rap2a;Rap2b;Rap2c Ras-related protein Rap-2a;Ras-related protein Rap-2b;Ras-related protein Rap-2c no no 0 0 0 0 5 0.816 1 1 1 67.26 67.26 2 0.0035083 24262 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.263 54.661 157.28 192.61 127.91 152.56 145.87 86.687 148 193 130 148 149 83 3 4 3 3 3 1 41420 22583 2346;1695;2460 21733 52464;52465;52466 60805;60806;60807;60808;60809 60806 5 YDPTIEDSYR Unmodified 1257.5513 0.55134667 79 A0A0G2JDL9;Q99JI6;P62835;A0A0G2JE52;A0A0G2JED9 Rap1b;Rap1a Ras-related protein Rap-1b;Ras-related protein Rap-1A yes no 0 0 0 0 6.67 4.5 1 1 1 51.146 51.146 2 1.58E-11 17250 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 166.66 121.32 187.38 92.605 265 220.47 339.24 0 176 93 260 222 334 0 2 1 3 3 3 0 55765 22584 79 21734 52467;52468;52469 60810;60811;60812 60810 3 YDQNYDIR Unmodified 1085.4778 0.47778779 3249 Q9JME5;Q9Z1T1 Ap3b2;Ap3b1 AP-3 complex subunit beta-2;AP-3 complex subunit beta-1 yes no 0 0 0 0 4 0 1 44.607 44.607 2 0.0034339 13684 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 123.21 99.053 69.042 53.714 72.649 86.389 0 88.478 65 56 74 83 0 83 1 1 1 1 0 1 7562 22585 3249 21735 52470 60813 60813 1 YDQQAEEDLR Unmodified 1265.5524 0.5524093 84 A0A0G2JDV8;Q9DAW9 Cnn3 Calponin-3 yes no 0 0 0 0 1 0 2 44.134 44.134 2;3 2.7096E-05 12602 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 125.74 73.791 59.862 44.908 0 108.88 0 0 56 46 0 102 0 0 1 1 0 2 0 0 23684 22586 84 21736 52471;52472 60814;60815 60815 2 YDSGGVSNGDCSLGVSGDEAR Deamidation (N) 2101.8495 0.84945554 2608 Q8K394 Plcl2 Inactive phospholipase C-like protein 2 yes yes 0 1 0 0 2 0 1 51.383 51.383 3 0.00037296 16849 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 50.752 46.135 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 1337.5 22587 2608 21737 52473 60816 60816 949 1 YDSGIPPYSR Unmodified 1153.5404 0.54038805 802 Q3UPV6;E0CXZ9;P62482 Kcnab2 Voltage-gated potassium channel subunit beta-2 yes no 0 0 0 0 5 0 1 49.532 49.532 2 0.011857 15649 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 63.816 29.563 39.395 16.939 37.13 37.906 17.124 29.359 37 19 37 37 19 28 1 1 1 1 1 1 2812.3 22588 802 21738 52474 60817 60817 1 YDSNSGGER Unmodified 983.39445 0.3944521 1712 P62192 Psmc1 26S protease regulatory subunit 4 yes yes 0 0 0 0 3 0 1 24.069 24.069 2 0.00097229 4691 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 108.93 95.551 14.91 0 18.749 38.924 21.266 29.241 14 0 19 37 23 28 1 0 1 1 1 1 2318.1 22589 1712 21739 52475 60818 60818 1 YDSSSTSSSDR Unmodified 1190.4687 0.46873925 3131 Q9DBR7;A0A1W2P750 Ppp1r12a Protein phosphatase 1 regulatory subunit 12A yes no 0 0 0 0 2 0 1 26.029 26.029 2 0.0037339 5352 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 69.954 48.447 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 0 0 0 630.51 22590 3131 21740 52476 60819 60819 1 YDSTHYK Unmodified 912.39775 0.39774656 3214 Q9JII6;B1AXW3 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes no 0 0 0 0 6.5 0.5 1 1 35.615 35.615 3 0.014537 8574 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.268 37.147 157.78 136.3 57.026 119.49 143.02 183.53 148 139 56 111 148 176 2 2 1 1 2 2 14311 22591 3214 21741 52477;52478 60820;60821 60820 2 YDVFCFTSNFNGR Deamidation (N) 1626.6773 0.67729224 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 1 0 0 8 0 1 79.93 79.93 2 0.052073 28006 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.434 50.779 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22592 3258 21742 52479 60822 60822 1117 1 YDVGGGER Unmodified 851.37735 0.37734547 1512 P35235 Ptpn11 Tyrosine-protein phosphatase non-receptor type 11 yes yes 0 0 0 0 4 0 1 34.477 34.477 2 0.016525 8914 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 81.642 50.353 0 69.16 0 71.045 0 0 0 65 0 65 0 0 0 1 0 1 0 0 7246.9 22593 1512 21743 52480 60823 60823 1 YDVIGDQEHLR Unmodified 1343.647 0.64697839 488 A2ALS5;A2ALS4;A2ALS3 Rap1gap Rap1 GTPase-activating protein 1 yes no 0 0 0 0 3 0 1 48.947 48.947 3 0.049427 16135 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 38.021 13.678 29.737 27.31 28.508 0 29.288 0 28 28 28 0 28 0 1 1 1 0 1 0 2172.9 22594 488 21744 52481 60824 60824 1 YDYEEVEAEGANK Unmodified 1515.6365 0.63653286 3022 Q9D0F9;A2CEK3 Pgm1;Pgm2 Phosphoglucomutase-1 yes no 0 0 0 0 3 0.707 1 2 1 55.099 55.099 3;4 9.7415E-05 18495 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 84.892 54.454 482.93 476.26 325.15 386.57 519.85 689.79 454 483 321 371 522 661 4 4 3 3 4 5 60828 22595 3022 21745 52482;52483;52484;52485 60825;60826;60827;60828;60829 60825 5 YDYNSGEELESYK Unmodified 1595.6627 0.66274761 3388 Q9Z1Z2 Strap Serine-threonine kinase receptor-associated protein yes yes 0 0 0 0 4 0 1 59.536 59.536 3 9.6819E-05 20817 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 84.753 64.517 39.416 0 148.55 36.926 121.81 58.698 37 0 139 37 120 56 1 0 2 1 2 1 7613.7 22596 3388 21746 52486 60830;60831 60831 2 YDYVEVIDGENEGGR Unmodified 1713.7482 0.74820857 1843 P97333 Nrp1 Neuropilin-1 yes yes 0 0 0 0 2 0 1 65.131 65.131 3 0.033868 23209 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 34.851 25.568 0 9.576 0 9.837 0 0 0 9 0 9 0 0 0 1 0 1 0 0 1348.6 22597 1843 21747 52487 60832 60832 1 YDYVLTGYTR Unmodified 1249.5979 0.59790293 2587 Q8K183 Pdxk Pyridoxal kinase yes yes 0 0 0 0 8 0 1 62.121 62.121 2 0.0073581 19569 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.399 52.931 63.746 48.878 65.074 44.937 77.754 81.995 60 51 65 46 79 79 1 1 1 1 1 1 7727.8 22598 2587 21748 52488 60833 60833 1 YEAAGTLVTLSSAPTAIK Unmodified 1791.9618 0.96183016 3211 Q9JIF7 Copb1 Coatomer subunit beta yes yes 0 0 0 0 9 0 1 73.708 73.708 3 0.013165 24336 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.816 16.72 99.508 0 47.156 47.468 0 0 93 0 46 46 0 0 1 0 1 1 0 0 6269.7 22599 3211 21749 52489 60834 60834 1 YEAANWK Unmodified 880.40792 0.40791731 3256 Q9QUM9;E0CXB1 Psma6 Proteasome subunit alpha type-6 yes no 0 0 0 0 7.5 0.5 1 1 51.772 51.772 2 0.0072946 15410 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 129.4 68.609 98.695 79.712 116.36 86.846 127.72 124.28 93 83 116 88 130 120 1 1 1 1 1 1 14940 22600 3256 21750 52490;52491 60835;60836 60835 2 YEDAYQYQNIFGPLVK Unmodified 1946.9414 0.94142907 3168 Q9EPU0 Upf1 Regulator of nonsense transcripts 1 yes yes 0 0 0 0 7.5 0.5 1 1 84.105 84.105 3 0.00031231 30000 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.377 51.107 49.358 19.595 37.155 38.227 38.702 0 46 19 37 37 37 0 1 1 1 1 1 0 5112.5 22601 3168 21751 52492;52493 60837;60838 60838 2 YEDFKDEGSENAVK Unmodified 1629.7158 0.71584581 2999 Q9CZ30 Ola1 Obg-like ATPase 1 yes yes 0 0 0 1 4.5 0.5 1 1 52.984 52.984 3 3.1923E-05 17750 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 105.03 72.688 148.31 82.986 69.98 49.243 123 37.872 139 83 65 46 121 37 2 1 1 1 2 1 10927 22602 2999 21752 52494;52495 60839;60840 60839 2 YEDSNNLGTSHLLR Unmodified 1617.7747 0.7746981 3117 Q9DB77 Uqcrc2 Cytochrome b-c1 complex subunit 2, mitochondrial yes yes 0 0 0 0 4.5 0.5 1 1 48.621 48.621 3 7.1684E-25 15269 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.81 110.62 118.83 54.9 0 91.812 0 119.39 111 56 0 84 0 112 2 1 0 2 0 2 49501 22603 3117 21753 52496;52497 60841;60842 60842 2 YEEDKFYLEPYLK Unmodified 1735.8345 0.83450439 2919 Q9CQB4;Q9D855 Uqcrb Cytochrome b-c1 complex subunit 7 yes no 0 0 0 1 7.8 2.79 1 1 1 1 1 73.172 73.172 3;4 0.00014398 27148 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 83.769 65.404 196.59 339.41 395.54 283.2 510.13 270.11 185 333 380 268 509 259 3 5 4 3 6 3 95940 22604 2919 21754 52498;52499;52500;52501;52502 60843;60844;60845;60846;60847;60848 60848 6 YEEDSYNR Unmodified 1074.4254 0.42541787 2789 Q920E5;A0A0G2JEA5 Fdps Farnesyl pyrophosphate synthase yes no 0 0 0 0 2 1 1 1 34.358 34.358 2 0.005356 9407 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 113.7 100.05 78.803 77.225 35.252 0 96.232 0 74 75 37 0 92 0 2 1 1 0 2 0 11158 22605 2789 21755 52503;52504 60849;60850 60850 2 YEEEVLSR Unmodified 1023.4873 0.48728985 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 0 3 0.816 1 1 1 47.438 47.438 2 4.6451E-16 15110 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 180.93 42.1 1567.4 923.86 1287.8 952.45 1136 1391 1472 981 1283 959 1169 1333 4 3 4 3 3 4 343830 22606 1329 21756 52505;52506;52507 60851;60852;60853;60854;60855 60852 5 YEEEVLSREDAEGR Unmodified 1680.7591 0.75910761 1329 P08551 Nefl Neurofilament light polypeptide yes yes 0 0 0 1 2 0.816 1 1 1 45.978 45.978 3 0.00010322 14483 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 100.54 81.219 174.52 153.88 147.35 185.84 102.5 159.41 164 158 151 179 105 151 3 4 3 3 3 3 48694 22607 1329 21757 52508;52509;52510 60856;60857;60858;60859 60858 4 YEEIVLER Unmodified 1049.5393 0.53932542 538 Q52KF7;A2BEE9;P70175 Dlg3 Disks large homolog 3 yes no 0 0 0 0 3 0 1 57.863 57.863 2 0.053925 20256 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 60.118 40.641 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22608 538 21758 52511 60860 60860 1 YEELFPAFSDSR Unmodified 1459.662 0.66195975 3106 Q9DB05 Napa Alpha-soluble NSF attachment protein yes yes 0 0 0 0 8 2.61 2 1 1 1 76.849 76.849 2;3 7.6335E-12 27144 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.77 89.503 118.03 74.333 145.19 48.268 149.68 124.15 111 74 139 46 148 120 4 2 3 1 3 3 29039 22609 3106 21759 52512;52513;52514;52515;52516 60861;60862;60863;60864;60865;60866 60864 6 YEELQITAGR Unmodified 1178.5932 0.5931519 657 CON__P04264 yes yes 0 0 0 0 8 3.56 1 1 1 54.714 54.714 2 0.0023741 18315 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 86.189 44.08 425.71 211.53 226.4 304.83 276.88 301.75 399 222 223 296 288 289 3 2 2 3 3 2 45632 + 22610 657 21760 52517;52518;52519 60867;60868;60869 60867 3 YEEMFPAFTDSR Unmodified 1491.634 0.63403044 1478 P28663 Napb Beta-soluble NSF attachment protein yes yes 0 0 0 0 8 3.56 1 1 1 73.661 73.661 2 0.0011427 26673 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 70.977 48.06 128.96 118.72 79.693 104.72 153.81 162.97 121 121 84 102 157 157 2 3 2 2 3 3 22464 22611 1478 21761 52520;52521;52522 60870;60871;60872 60871 3 YEETVFYGLQYILNK Unmodified 1878.9404 0.94036644 2848 Q99KQ4 Nampt Nicotinamide phosphoribosyltransferase yes yes 0 0 0 0 10.8 1.48 1 1 1 1 100.29 100.29 3 7.571E-09 32652 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 115.8 97.888 14 6.2818 6.1151 0 6.276 0 14 6 6 0 6 0 1 1 1 0 1 0 1773.5 22612 2848 21762 52523;52524;52525;52526 60873;60874;60875;60876 60874 4 YEFEQGLSEK Unmodified 1228.5612 0.56118307 2517 Q8CAQ8;E9Q800;E9QAY6;A0A0U1RQ14 Immt MICOS complex subunit Mic60 yes no 0 0 0 0 4.5 0.5 1 1 59.498 59.498 3 9.3019E-06 20477 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 115.18 73.635 148.53 55.211 57.555 56.922 139.83 85.786 139 55 56 56 139 83 2 1 1 1 2 1 24115 22613 2517 21763 52527;52528 60877;60878 60878 2 YEFGIFNQK Unmodified 1144.5553 0.55530983 2555;3331 Q8CI94;Q9WUB3 Pygb;Pygm Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form no no 0 0 0 0 7.75 0.829 2 1 1 70.853 70.853 2;3 0.0039594 24364 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 88.37 51.813 59.689 170.74 174.75 115.35 35.111 183.92 56 167 176 111 37 176 1 4 4 2 1 4 59775 22614 2555;3331 21764 52529;52530;52531;52532 60879;60880;60881;60882;60883 60879 5 YEFQGNHFQVTR Unmodified 1524.711 0.71097563 2845 Q99KK7 Dpp3 Dipeptidyl peptidase 3 yes yes 0 0 0 0 6 0 1 49.278 49.278 3 0.0088211 15009 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 48.467 30.199 0 0 58.947 36.928 0 0 0 0 56 37 0 0 0 0 1 1 0 0 2437.2 22615 2845 21765 52533 60884 60884 1 YEGFFGLYR Unmodified 1150.5447 0.54474515 2396;3270 Q8BH59;Q9QXX4 Slc25a12;Slc25a13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 no no 0 0 0 0 9.5 0.5 1 1 74.755 74.755 2 0.0009422 24801 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.12 73.786 296.22 93.476 269.13 89.939 165.11 158.39 278 102 259 88 167 153 2 1 2 1 2 2 42479 22616 2396;3270 21766 52534;52535 60885;60886 60885 2 YEGFFSLWK Unmodified 1175.5651 0.56514624 2957 Q9CR62 Slc25a11 Mitochondrial 2-oxoglutarate/malate carrier protein yes yes 0 0 0 0 11 0.816 1 1 1 88.172 88.172 3 0.00037193 28435 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.431 47.307 65 29.478 18.789 0 0 0 65 28 19 0 0 0 1 1 1 0 0 0 13701 22617 2957 21767 52536;52537;52538 60887;60888;60889 60887 3 YEGGYPALTEVMNK Unmodified 1570.7337 0.73374448 1238 O55126;Q7TMG8 Gbas Protein NipSnap homolog 2 yes no 0 0 0 0 8.67 3.09 1 1 1 71.963 71.963 3 0.00048289 24989 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.246 44.995 276.49 243.81 270.92 279 192.32 265.33 260 250 269 269 194 250 4 4 4 4 3 3 14587 22618 1238 21768 52539;52540;52541 60890;60891;60892;60893;60894 60892 5 YEGSGDGGAAAQSLYIANHAY Deamidation (N) 2114.9181 0.91812745 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 1 0 0 3.8 0.748 2 2 1 63.736 63.736 3 7.1716E-34 23978 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 112.74 99.894 0 63.285 62.229 28.194 65.376 68.26 0 60 60 28 65 65 0 2 2 1 2 2 22039 22619 1308 21769 52542;52543;52544;52545;52546 60895;60896;60897;60898;60899 60896 366 5 YEGSGDGGAAAQSLYIANHAY Unmodified 2113.9341 0.93411186 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 6.17 3.13 2 2 1 1 63.325 63.325 2;3 7.5835E-18 22334 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.54 111.9 199.85 71.188 92.28 74.142 104.06 126.81 189 69 87 69 104 120 4 3 2 2 4 3 131480 22620 1308 21769 52547;52548;52549;52550;52551;52552 60900;60901;60902;60903;60904;60905;60906;60907;60908 60904 9 YEGVVDIFQTVK Unmodified 1396.7238 0.72383172 568;642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;Q5SPA9;B0V2N1 Ptprd;Ptprs Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase S no no 0 0 0 0 7.5 0.5 1 1 81.584 81.584 2;3 0.00010907 28738 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 93.258 67.521 0 39.826 36.227 59.049 37.714 68.214 0 38 37 56 37 65 0 2 1 1 1 2 3845.6 22621 642;568 21770 52553;52554 60909;60910 60910 2 YEGYCVDLAAEIAK Unmodified 1600.7443 0.74430917 1104 G5E8H1 Gria2 no no 0 0 0 0 5 0 1 74.462 74.462 3 0.00040539 27477 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.115 46.162 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2964.1 22622 1104 21771 52555 60911 60911 1 YEIDLDTSDHAHLEHISR Unmodified 2150.0029 0.0028601316 1568 P47857 Pfkm ATP-dependent 6-phosphofructokinase, muscle type yes yes 0 0 0 0 4 0 1 50.358 50.358 5 0.00011443 16497 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.525 47.329 0 29.792 0 0 38.702 0 0 28 0 0 37 0 0 1 0 0 1 0 2003.1 22623 1568 21772 52556 60912 60912 1 YEIHLIK Unmodified 914.52255 0.52255314 456 A2AFG7;A2AFG8;Q6PGJ3;P11627;F6UIL7 L1cam Neural cell adhesion molecule L1 yes no 0 0 0 0 13 0 1 55.877 55.877 3 0.060454 19020 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.718 8.6972 87.977 91.274 104.44 0 74.438 86.354 83 93 102 0 74 83 1 1 1 0 1 1 16436 22624 456 21773 52557 60913 60913 1 YEILTPNAIPK Unmodified 1257.6969 0.69688869 1974;1149 Q3UH59;Q61879;Q5SV64;Q6URW6;K3W4R2;A0A140LI60 Myh10;Myh14 Myosin-10;Myosin-14 no no 0 0 0 0 8.5 0.5 1 1 68.864 68.864 2;3 0.0011208 22860 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 75.294 43.073 59.812 0 46.459 67.607 35.596 0 56 0 46 65 37 0 1 0 1 1 1 0 3936.9 22625 1974;1149 21774 52558;52559 60914;60915 60914 2 YEISPEAYER Unmodified 1255.5721 0.57208211 3039 Q9D1E6 Tbcb Tubulin-folding cofactor B yes yes 0 0 0 0 6.67 4.5 1 1 1 53.445 53.445 2;3 5.3025E-07 18060 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.55 97.827 0 97.824 145.54 44.592 168.36 124.49 0 93 139 46 167 120 0 2 2 1 3 2 13121 22626 3039 21775 52560;52561;52562 60916;60917;60918 60917 3 YEISSVPTFLFFK Unmodified 1576.8177 0.81773211 259 A0A1B0GS58;Q9CQM9;A0A1B0GT04 Glrx3 Glutaredoxin-3 yes no 0 0 0 0 11.4 1.02 1 2 1 1 94.654 94.654 2;3 0.00062236 30837 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 65.563 34.735 118.82 0 47.899 68.19 29.288 50.102 111 0 46 65 28 47 4 0 1 2 1 2 40260 22627 259 21776 52563;52564;52565;52566;52567 60919;60920;60921;60922;60923 60921 5 YEIYVSVLK Unmodified 1112.6118 0.61176208 814 E9PUC5;F6Z9E6;A0A1D5RLK2;A0A1D5RMH7;Q2PFD7 Psd3 PH and SEC7 domain-containing protein 3 yes no 0 0 0 0 9 0 1 74.515 74.515 2 9.1813E-05 24746 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.12 59.683 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22628 814 21777 52568 60924 60924 1 YELAGLPGK Unmodified 946.51238 0.51238239 2499 Q8C419 Gpr158 Probable G-protein coupled receptor 158 yes yes 0 0 0 0 7 0 1 63.137 63.137 2 0.016708 20543 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 67.993 43.07 69.076 53.81 66.753 0 65.675 67.416 65 56 65 0 65 65 1 1 1 0 1 1 4241.3 22629 2499 21778 52569 60925 60925 1 YELEEDGAPFGEDSNSR Unmodified 1913.7915 0.79152995 435 A6PWC3;A2A9Q2;Q8BHG1 Nrd1 Nardilysin yes no 0 0 0 0 1 0 1 60.954 60.954 3 0.0018365 20050 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 45.704 34.85 0 29.792 0 0 19.874 0 0 28 0 0 19 0 0 1 0 0 1 0 1393.3 22630 435 21779 52570 60926 60926 1 YELLNVLEFTSAR Unmodified 1553.809 0.80895834 121 A0A0M3HEP7;P70704 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 10 2.16 1 1 1 89.399 89.399 2;3 9.3968E-07 31515 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 110.15 65.947 23.416 21.601 13.656 26.042 24.954 0 22 22 15 25 25 0 1 1 1 1 1 0 3157.1 22631 121 21780 52571;52572;52573 60927;60928;60929 60928 3 YENEVLQLEEDERFEGR Unmodified 2153.9865 0.98654137 1860 P97952 Scn1b Sodium channel subunit beta-1 yes yes 0 0 0 1 2 1 1 1 65.246 65.246 3 5.6805E-06 23613 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 101.67 83.868 54.516 41.012 0 50.521 45.202 47.746 51 42 0 47 47 46 2 2 0 2 2 2 11510 22632 1860 21781 52574;52575 60930;60931 60931 2 YENNVMNIR Deamidation (N) 1152.5234 0.52335778 1786;811;374 A0A2I3BPC5;P48455;E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cc;Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 1 0 0 4.5 0.5 1 1 53.998 53.998 2 0.026392 17847 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 98.033 66.959 59.302 74.359 156.59 0 114.17 107.15 56 75 148 0 112 102 1 2 2 0 2 2 13399 22633 374;811;1786 21782 52576;52577 60932;60933;60934 60934 98 3 YENNVMNIR Unmodified 1151.5393 0.53934219 1786;811;374 A0A2I3BPC5;P48455;E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cc;Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 5.5 0.5 1 1 50.419 50.419 3 0.0021207 16185 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 74.376 45.215 78.134 81.703 143.84 28.272 73.798 67.184 74 84 139 28 74 65 2 2 2 1 2 2 8003.9 22634 374;811;1786 21782 52578;52579 60935;60936 60935 2 YEPNSSLAK Unmodified 1007.4924 0.49237523 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 6.5 0.5 1 1 46.914 46.914 2 0.001326 13075 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.965 58.419 59.103 82.732 95.364 0 0 78.884 56 83 93 0 0 74 1 1 1 0 0 1 5219.3 22635 3373 21783 52580;52581 60937;60938 60938 2 YESIIATLCENLDSLDEPDAR Unmodified 2423.1162 0.11623491 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 0 6 0 1 97.894 97.894 3 0.010951 36762 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 31.767 19.639 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22636 3123 21784 52582 60939 60939 1 YESLELCRPVLQQGR Unmodified 1846.936 0.93596654 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 1 7.8 2.79 1 1 1 1 1 56.791 56.791 3 7.6952E-12 18576 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 124.51 81.959 374.15 328.85 509.44 296.09 409.05 403 352 340 503 303 416 389 3 4 5 4 4 5 172300 22637 2185 21785 52583;52584;52585;52586;52587 60940;60941;60942;60943;60944 60941 5 YESLTDPSK Unmodified 1038.487 0.4869555 1322;1354 P07901;B7ZC50;A2A6A2;B7ZC49;P11499;E9PX27;D3Z1R1 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 7.33 2.75 2 1 1 1 1 51.468 51.468 2;3 1.4866E-05 16720 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 149.94 91.359 553.6 369.05 420.25 497.85 687.23 491.2 520 382 414 482 695 476 5 4 3 4 5 4 195440 22638 1322;1354 21786 52588;52589;52590;52591;52592;52593 60945;60946;60947;60948;60949;60950 60950 6 YESLTDPSKLDSGK Unmodified 1538.7464 0.74641766 1322;1354 P07901;B7ZC50;A2A6A2;B7ZC49;P11499;E9PX27;D3Z1R1 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 1 7.75 3.11 1 1 1 1 57.205 57.205 3;4 7.7065E-05 18786 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 79.81 62.066 559.91 682.9 489.75 754.19 713.51 845.23 527 685 488 729 743 812 3 4 2 4 4 4 77421 22639 1322;1354 21787 52594;52595;52596;52597 60951;60952;60953;60954 60952 4 YESSLYSQEYSKPAVASFNGLSEGSK Unmodified 2827.3188 0.31883412 1382 P14873 Map1b Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 yes yes 0 0 0 1 6 0 1 68.417 68.417 4 3.5119E-11 23982 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.051 46.288 49.08 55.211 0 0 46.111 58.38 46 55 0 0 46 56 1 1 0 0 1 1 5635.1 22640 1382 21788 52598 60955 60955 1 YETEKNNGAGYFLEHLAFK Deamidation (N) 2231.0535 0.053498719 2998 Q9CZ13;A0A0A6YW82 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes no 0 1 0 1 7.5 0.5 1 1 75.808 75.808 4 7.2846E-05 26291 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 61.102 40.477 48.74 114.93 57.026 0 181.49 75.914 46 112 56 0 176 74 1 2 1 0 2 1 4652.5 22641 2998 21789 52599;52600 60956;60957 60956 1043;1044 2 YETSGIGEAR Unmodified 1081.504 0.50400254 1160 O08599 Stxbp1 Syntaxin-binding protein 1 yes yes 0 0 0 0 6.2 3.54 1 1 1 1 1 40.012 40.012 2 5.2591E-18 12083 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 179.81 132.15 737.85 738.95 660.7 714.68 1148 656.96 694 746 654 689 1148 638 5 5 4 4 5 3 294450 22642 1160 21790 52601;52602;52603;52604;52605 60958;60959;60960;60961;60962;60963 60958 6 YEVSISAVR Unmodified 1022.5397 0.53965977 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 8 3.56 1 1 1 53.392 53.392 2 2.3674E-05 17017 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 146.03 80.718 513.49 466.28 587.23 437.73 578.69 473.05 484 480 589 437 588 456 4 4 4 3 4 3 77386 22643 2479 21791 52606;52607;52608 60964;60965;60966;60967 60965 4 YEVTEDVYTSR Unmodified 1360.6147 0.61467521 2612 Q8K3H0 Appl1 DCC-interacting protein 13-alpha yes yes 0 0 0 0 3 0 1 52.125 52.125 2 0.0043067 17651 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 68.626 48.105 9.4563 39.794 0 30.269 17.805 19.746 9 38 0 28 19 19 1 1 0 1 1 1 3146 22644 2612 21792 52609 60968 60968 1 YEWDVAEAR Unmodified 1137.5091 0.50908792 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 6.67 4.5 1 1 1 56.593 56.593 2 3.595E-05 19809 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 135 112.91 176.28 155.38 177.7 241.87 233.51 217.45 166 160 182 235 241 209 2 2 2 3 3 2 48795 22645 1652 21793 52610;52611;52612 60969;60970;60971 60969 3 YEYQPFAGK Unmodified 1101.5131 0.51311067 1263 O88342 Wdr1 WD repeat-containing protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 58.474 58.474 2;3 3.7825E-05 18610 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 134.26 80.292 235.58 206.3 265.77 263.12 219.42 94.974 222 213 269 259 222 93 3 3 3 3 2 1 45946 22646 1263 21794 52613;52614;52615 60972;60973;60974 60972 3 YFAGNLASGGAAGATSLCFVYPLDFAR Unmodified 2795.3377 0.33773584 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 8.21 4.69 4 1 3 2 2 2 94.605 94.605 3;4 1.9004E-46 33316 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 107.32 99.603 248.09 83.936 308.89 232.15 119.79 277.09 235 82 301 229 120 263 6 4 6 5 4 4 247300 22647 1585;1607 21795 52616;52617;52618;52619;52620;52621;52622;52623;52624;52625;52626;52627;52628;52629 60975;60976;60977;60978;60979;60980;60981;60982;60983;60984;60985;60986;60987;60988;60989;60990;60991;60992;60993;60994 60976 20 YFAGNLASGGAAGATSLCFVYPLDFAR Deamidation (N) 2796.3218 0.32175143 1585;1607 P48962;P51881 Slc25a4;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 1 0 0 9 0 1 98.374 98.374 3 7.4628E-10 35206 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.058 44.625 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22648 1585;1607 21795 52630 60995 60995 601 1 YFAGWADK Unmodified 956.43922 0.43921744 3009 Q9CZS1;A0A140LIF9;G3UWP3;Q9JHW9 Aldh1b1;Aldh1a3 Aldehyde dehydrogenase X, mitochondrial;Aldehyde dehydrogenase family 1 member A3 yes no 0 0 0 0 8 0 1 66.046 66.046 2 0.048279 21450 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 62.107 16.135 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22649 3009 21796 52631 60996 60996 1 YFAGWCDK Unmodified 1045.4328 0.43275186 2633 Q8R0Y6;D3Z6B9;Q8K009 Aldh1l1;Aldh1l2 Cytosolic 10-formyltetrahydrofolate dehydrogenase;Mitochondrial 10-formyltetrahydrofolate dehydrogenase yes no 0 0 0 0 8.5 0.5 1 1 64.55 64.55 2 0.0063797 20780 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 86.011 54.056 88.231 41.252 104.22 72.409 120.26 56.264 83 46 102 74 120 56 1 1 1 1 1 1 6573.1 22650 2633 21797 52632;52633 60997;60998 60997 2 YFAQEALTVLSLA Unmodified 1424.7551 0.75513185 2272 Q76MZ3 Ppp2r1a Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform yes yes 0 0 0 0 10.5 1.71 1 1 1 1 1 1 111.03 111.03 2 8.4189E-11 34214 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 120.99 90.822 19.054 25.394 33.839 64.629 33.866 44.089 18 25 34 62 35 42 4 4 4 8 4 4 118950 22651 2272 21798 52634;52635;52636;52637;52638;52639 60999;61000;61001;61002;61003;61004;61005;61006;61007;61008;61009;61010 61006 12 YFASSFEWCR Unmodified 1351.5656 0.56555694 2319 Q80UW2 Fbxo2 F-box only protein 2 yes yes 0 0 0 0 11 2 1 1 70.759 70.759 2 0.00014926 23058 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 100.84 83.4 48.846 35.135 137.36 45.549 73.333 156.74 46 37 131 46 74 149 1 1 2 1 1 2 15691 22652 2319 21799 52640;52641 61011;61012 61011 2 YFCQLYTDPPQESYTTITVLVPPR Unmodified 2887.4102 0.41023209 856 Q8R5M8;E9PYN1;E0CY16 Cadm1 Cell adhesion molecule 1 yes no 0 0 0 0 8 0 1 87.194 87.194 4 2.8999E-12 31569 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.651 63.363 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1347.1 22653 856 21800 52642 61013 61013 1 YFDGSGGNNHAVEHYR Unmodified 1821.7819 0.78190874 1641 Q3U4W8;P56399;D3YYA5;D3Z4K7 Usp5 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 5 yes no 0 0 0 0 5 0 1 37.573 37.573 4 0.0024805 9954 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 46.68 35.241 49.963 0 78.691 25.246 35.527 58.682 47 0 74 28 37 56 1 0 1 1 1 1 3206.5 22654 1641 21801 52643 61014 61014 1 YFDLGLPNR Unmodified 1093.5556 0.55564418 1618 P54071;D6RIL6;A0A0U1RP68 Idh2 Isocitrate dehydrogenase [NADP], mitochondrial yes no 0 0 0 0 8 0 1 69.638 69.638 2 0.0173 23247 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.464 45.316 108.71 60.61 72.989 64.977 91.344 85.871 102 65 74 65 93 83 1 1 1 1 1 1 12856 22655 1618 21802 52644 61015 61015 1 YFDRVDENNPEYLR Unmodified 1828.838 0.83802663 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;D3Z0T1 Add1 Alpha-adducin yes no 0 0 0 1 8.5 4.5 1 1 54.718 54.718 3 0.00025086 18358 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 94.09 78.541 248.32 142.69 163.67 169.68 221.57 190.89 233 148 167 167 223 185 3 2 2 2 2 2 34837 22656 3276 21803 52645;52646 61016;61017;61018 61018 3 YFDSFGDLSSASAIMGNAK Deamidation (N) 1980.8775 0.87750819 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 1 0 0 7 3.85 1 1 1 1 1 86.367 86.367 3 9.4826E-28 32456 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 143.14 127.02 221.66 84.287 102.88 222.52 162.32 146.4 207 84 102 211 165 140 4 3 3 5 3 3 56532 22657 562 21804 52647;52648;52649;52650;52651 61019;61020;61021;61022;61023;61024 61020 164 6 YFDSFGDLSSASAIMGNAK Unmodified 1979.8935 0.8934926 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 0 0 0 9 2.11 3 2 1 1 1 1 85.243 85.243 2;3;4 1.3835E-19 29795 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 127.94 113.15 167.02 132.34 196.01 218.78 195.93 360.23 158 130 185 205 195 345 4 3 4 5 4 7 391370 22658 562 21804 52652;52653;52654;52655;52656;52657;52658;52659;52660 61025;61026;61027;61028;61029;61030;61031;61032;61033;61034;61035;61036;61037 61032 13 YFDSFGDLSSASAIMGNAK Oxidation (M) 1995.8884 0.88840723 562 A8DUK4;P02088;E9Q223 Hbbt1;Hbb-b1;Hbb-bs Hemoglobin subunit beta-1 yes no 0 0 1 0 10.5 2.5 1 1 78.825 78.825 3 0.02362 28735 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 44.391 34.333 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22659 562 21804 52661;52662 61038;61039 61038 26 2 YFDSFGDLSSASAIMGNPK Oxidation (M);Deamidation (N) 2022.8881 0.88807287 1299 P02089 Hbb-b2 Hemoglobin subunit beta-2 yes yes 0 1 1 0 9.25 2.28 1 1 1 1 78.034 78.034 3 8.1779E-08 29858 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 78.597 62.103 127.55 200.21 243.19 110.33 233.51 289.68 120 194 241 111 232 278 2 3 4 2 2 3 56124 22660 1299 21805 52663;52664;52665;52666 61040;61041;61042;61043 61043 357 62 4 YFEFHGVR Unmodified 1053.5032 0.50321468 1768 P63046 Sult4a1 Sulfotransferase 4A1 yes yes 0 0 0 0 8 0 1 51.596 51.596 3 0.0029321 14607 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 84.498 68.856 69.347 24.342 46.321 36.832 45.114 38.155 65 28 46 37 46 37 1 1 1 1 1 1 6907.3 22661 1768 21806 52667 61044 61044 1 YFEITDEPPYIHFLNTFTSK Unmodified 2461.1842 0.18417854 3335 Q9WUM3 Coro1b Coronin-1B yes yes 0 0 0 0 9 0 1 94.665 94.665 3 0.00034798 33791 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 49.089 36.775 0 0 0 0 0 9 0 0 0 0 0 9 0 0 0 0 0 1 1529.5 22662 3335 21807 52668 61045 61045 1 YFEITDESPYVHYLNTFSSK Unmodified 2439.1271 0.12705759 3336 Q9WUM4 Coro1c Coronin-1C yes yes 0 0 0 0 8 0 1 81.903 81.903 3 3.2273E-09 28926 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.674 67.028 0 19.907 18.503 19.32 18.309 19.732 0 19 19 19 19 19 0 1 1 1 1 1 3802.1 22663 3336 21808 52669 61046 61046 1 YFENWSASMI Unmodified 1246.5329 0.53285983 1294 P00405 Mtco2 Cytochrome c oxidase subunit 2 yes yes 0 0 0 0 10 3 1 1 90.485 90.485 2 0.00016077 35859 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 100.02 80.919 58.272 44.867 86.82 0 48.116 0 55 46 83 0 46 0 2 1 2 0 1 0 15980 22664 1294 21809 52670;52671 61047;61048 61048 2 YFFYSSGEK Unmodified 1126.4971 0.49712625 947;787 D3Z7E5;Q2NL51;E9QAQ5;Q9WV60 Gsk3a;Gsk3b Glycogen synthase kinase-3 alpha;Glycogen synthase kinase-3 beta no no 0 0 0 0 10 0 1 64.666 64.666 2 0.0014849 17993 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.54 59.255 56 0 0 0 0 0 56 0 0 0 0 0 1 0 0 0 0 0 5433.8 22665 787;947 21810 52672 61049 61049 1 YFGGTEDR Unmodified 943.40356 0.40356022 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 5.5 0.5 1 1 42.039 42.039 2 0.0021155 11591 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 129.68 70.901 48.636 113.49 143.73 137 105.9 160.08 46 112 145 135 107 153 1 2 2 2 1 2 28318 22666 2131 21811 52673;52674 61050;61051 61051 2 YFGPNLLNTVK Unmodified 1264.6816 0.68157298 1727 P62488 Polr2g DNA-directed RNA polymerase II subunit RPB7 yes yes 0 0 0 0 11 0 2 75.348 75.348 2;3 0.0013881 22432 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.898 32.741 49.715 27.807 96.811 42.557 103.76 28.512 47 28 93 46 102 28 2 1 2 2 2 1 5496.9 22667 1727 21812 52675;52676 61052;61053 61053 2 YFHVVIAGPQDSPFEGGTFK Unmodified 2195.0688 0.068754852 1688 P61089;A0A1W2P7Z3 Ube2n Ubiquitin-conjugating enzyme E2 N yes no 0 0 0 0 8.71 1.03 1 2 2 2 75.358 75.358 3;4 1.5554E-38 25062 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 144.3 128.88 328.97 255.51 238.39 282.92 274.85 256.38 308 252 232 269 269 241 7 6 4 4 5 5 96225 22668 1688 21813 52677;52678;52679;52680;52681;52682;52683 61054;61055;61056;61057;61058;61059;61060;61061;61062;61063;61064 61059 11 YFIAPVK Unmodified 836.47963 0.47962569 1035 F8VQJ3;P02468 Lamc1 Laminin subunit gamma-1 yes no 0 0 0 0 11 0 1 64.219 64.219 2 0.040653 17413 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.027 34.58 84.447 63.466 0 0 80.003 76.601 79 65 0 0 79 74 1 1 0 0 1 1 8823.6 22669 1035 21814 52684 61065 61065 1 YFILPDSLPLDTLLVDVEPK Unmodified 2286.2399 0.23990251 1722 P62315 Snrpd1 Small nuclear ribonucleoprotein Sm D1 yes yes 0 0 0 0 9.33 2.62 1 1 1 110.08 110.08 3 3.4113E-13 37661 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 110.37 88.698 2.1306 6.2403 0 0 9.414 7 2 6 0 0 9 7 1 2 0 0 2 1 4097.1 22670 1722 21815 52685;52686;52687 61066;61067;61068 61066 3 YFIRDEFLR Unmodified 1257.6506 0.6506072 1772 Z4YKV1;P63094;Q6R0H7 Gnas Guanine nucleotide-binding protein G(s) subunit alpha isoforms short;Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas yes no 0 0 0 1 10 2.16 1 1 1 62.041 62.041 3 0.0021799 18915 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.15 57.896 168.1 130.1 130.9 131.46 206.82 181.71 158 130 130 130 204 176 3 2 2 2 2 3 22081 22671 1772 21816 52688;52689;52690 61069;61070;61071 61070 3 YFLFYDGETVSGK Unmodified 1524.7137 0.71366097 2485 Q8C0E2 Vps26b Vacuolar protein sorting-associated protein 26B yes yes 0 0 0 0 9 0.707 1 2 1 79.607 79.607 2;3 8.0019E-08 27160 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.879 68.099 0 29.792 0 30.098 26.907 29.08 0 28 0 28 28 28 0 1 0 1 1 1 17204 22672 2485 21817 52691;52692;52693;52694 61072;61073;61074;61075 61074 4 YFLQAAK Unmodified 839.45414 0.45413923 1967 Q3UE92;Q6P1B1;S4R1I3;S4R228 Xpnpep1 Xaa-Pro aminopeptidase 1 yes no 0 0 0 0 11 0.816 1 1 1 59.527 59.527 2 0.0059544 15336 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 132.72 77.323 345.4 373.96 423.01 259.93 297.65 335.82 326 380 424 266 307 323 2 2 2 2 2 2 59107 22673 1967 21818 52695;52696;52697 61076;61077;61078 61077 3 YFLQGMGYIAHLK Unmodified 1539.7908 0.79080585 2454 Q8BTG7;A0A1D5RM17 Ndrg4 Protein NDRG4 yes no 0 0 0 0 6.5 5.5 1 1 78.595 78.595 3 4.9412E-16 21063 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 140.31 93.027 79.26 28.189 0 70.279 40.722 40.412 74 29 0 65 42 39 2 1 0 2 1 1 12863 22674 2454 21819 52698;52699 61079;61080 61080 2 YFLQGMGYMASSCMTR Unmodified 1901.7933 0.79326675 3277 Q9QYG0 Ndrg2 Protein NDRG2 yes yes 0 0 0 0 6.5 5.5 1 1 77.104 77.104 3 0.00018354 26804 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 65.943 65.943 58.714 0 50.558 0 8.3971 59.456 55 0 47 0 9 56 2 0 2 0 1 2 8767.4 22675 3277 21820 52700;52701 61081;61082;61083 61081 3 YFLQTTTPLDYEK Unmodified 1617.7926 0.79263957 1018;2532 F7BJK1;Q8CFX3 Pcdh1 no no 0 0 0 0 11 2 1 1 74.585 74.585 2;3 1.2253E-06 24848 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 108.35 87.316 49.074 56.275 0 0 75.794 46.873 46 56 0 0 74 46 1 1 0 0 1 1 11350 22676 1018;2532 21821 52702;52703 61084;61085 61084 2 YFLVGAGAIGCELLK Unmodified 1609.8538 0.85380004 1876 Q02053;P31254 Uba1;Uba1y Ubiquitin-like modifier-activating enzyme 1;Ubiquitin-like modifier-activating enzyme 1 Y yes no 0 0 0 0 11.4 1.18 2 2 1 2 89.392 89.392 2;3;4 2.0232E-29 28511 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 156.48 99.917 207.34 160.38 183.19 77.901 128.43 115.73 194 164 177 74 130 112 5 6 4 2 4 4 155310 22677 1876 21822 52704;52705;52706;52707;52708;52709;52710 61086;61087;61088;61089;61090;61091;61092;61093;61094;61095 61089 10 YFNSYTLTGR Unmodified 1220.5826 0.58258722 2273 Q78IK2 Usmg5 Up-regulated during skeletal muscle growth protein 5 yes yes 0 0 0 0 9.5 0.5 1 1 60.207 60.207 2 0.0060998 16087 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 68.49 47.336 69.057 0 115.58 93.612 61.041 77.142 65 0 111 93 65 74 1 0 1 1 1 1 10950 22678 2273 21823 52711;52712 61096;61097 61097 2 YFPGFDWFFLDPITSSGIK Unmodified 2236.0881 0.088093311 2865 Q99LR1 Abhd12 Monoacylglycerol lipase ABHD12 yes yes 0 0 0 0 11 0 1 112.49 112.49 3 5.308E-07 36208 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 70.942 54.804 2.136 1.984 0 2.186 0 0 2 2 0 2 0 0 1 1 0 1 0 0 994.94 22679 2865 21824 52713 61098 61098 1 YFPGHSK Unmodified 834.40244 0.40243801 22 A0A087WQ38;Q8BFQ4 Wdr82 WD repeat-containing protein 82 yes no 0 0 0 0 9 0 1 38.838 38.838 3 0.030919 8424 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 57.559 36.658 59.338 68.274 68.251 45.147 56.502 0 56 69 69 46 56 0 1 1 1 1 1 0 4193.6 22680 22 21825 52714 61099 61099 1 YFPTQALNFAFK Unmodified 1445.7343 0.73433683 1585;1607 P48962;Q3V132;P51881 Slc25a4;Slc25a31;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 0 7.17 5.26 5 1 2 3 1 86.498 86.498 2;3;4 6.6835E-33 33556 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 180.97 148.69 2731 1886.5 1891.7 1602.9 1347 2039 2564 1958 1891 1585 1404 1941 14 11 12 13 13 12 1528400 22681 1585;1607 21826 52715;52716;52717;52718;52719;52720;52721;52722;52723;52724;52725;52726 61100;61101;61102;61103;61104;61105;61106;61107;61108;61109;61110;61111;61112;61113;61114;61115;61116;61117;61118;61119;61120;61121;61122;61123;61124 61122 25 YFPTQALNFAFK Deamidation (N) 1446.7184 0.71835242 1585;1607 P48962;Q3V132;P51881 Slc25a4;Slc25a31;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 1 0 0 9.8 0.748 2 2 1 86.797 86.797 2;3 8.9735E-10 26598 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 96.103 75.996 22 59.584 109.51 79.37 85.972 68.777 22 56 102 74 84 65 1 1 2 2 2 2 11708 22682 1585;1607 21826 52727;52728;52729;52730;52731 61125;61126;61127;61128;61129;61130 61129 602 6 YFPTQALNFAFKDK Unmodified 1688.8562 0.85624288 1585;1607 P48962;Q3V132;P51881 Slc25a4;Slc25a31;Slc25a5 ADP/ATP translocase 1;ADP/ATP translocase 4;ADP/ATP translocase 4, N-terminally processed;ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed no no 0 0 0 1 11 0 1 78.114 78.114 4 0.023552 23746 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.621 26.229 0 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 3864.5 22683 1585;1607 21827 52732 61131 61131 1 YFPTTAR Unmodified 854.42865 0.42865276 935 E9Q8N8;O88343;A7E1Z5 Slc4a4 Anion exchange protein;Electrogenic sodium bicarbonate cotransporter 1 yes no 0 0 0 0 8.5 0.5 1 1 46.319 46.319 2 0.027006 12199 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.903 61.037 73.248 67.212 213.23 69.576 165.2 182.9 69 69 204 74 167 176 1 1 2 1 1 1 17103 22684 935 21828 52733;52734 61132;61133 61132 2 YFPVFEK Unmodified 928.46945 0.46945494 1445 P24472 Gsta4 Glutathione S-transferase A4 yes yes 0 0 0 0 9.5 0.5 1 1 72.205 72.205 2;3 0.027467 21586 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.887 62.417 386.06 394.24 63.965 361.39 515.63 379.71 362 396 65 343 515 370 2 2 1 2 1 2 57419 22685 1445 21829 52735;52736 61134;61135 61135 2 YFPYYGK Unmodified 936.43815 0.43815481 1846 P97370 Atp1b3 Sodium/potassium-transporting ATPase subunit beta-3 yes yes 0 0 0 0 10.5 0.5 1 1 63.249 63.249 2 0.0060976 17002 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 140.79 92.287 238.07 203.85 211.29 322.73 285.49 249.83 224 210 216 322 290 242 1 1 1 2 1 1 44400 22686 1846 21830 52737;52738 61136;61137 61137 2 YFQDEEYK Unmodified 1120.4713 0.47130543 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 0 7 3.54 1 1 1 1 54.518 54.518 2;3 0.0020504 18548 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 97.431 68.687 275.07 81.109 407.64 157.31 208.91 193.99 259 83 389 157 213 186 4 1 4 2 3 2 34027 22687 2370 21831 52739;52740;52741;52742 61138;61139;61140;61141 61138 4 YFQFQEEGK Unmodified 1174.5295 0.52948901 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 0 8.67 3.09 1 1 1 61.185 61.185 2;3 0.00032793 19924 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 86.67 63.294 38.795 152.44 144.47 142.07 124.16 154.23 37 148 148 140 130 148 1 2 2 2 2 2 16561 22688 2971 21832 52743;52744;52745 61142;61143;61144 61143 3 YFQFQEEGKEGENR Unmodified 1759.7802 0.7801774 2971 Q9CVB6;D3YXG6 Arpc2 Actin-related protein 2/3 complex subunit 2 yes no 0 0 0 1 6 0.816 1 1 1 53.136 53.136 3 0.00020989 16742 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.499 60.171 127.45 107.36 196.36 169.47 72.202 76.824 120 111 195 167 74 74 2 2 3 3 1 1 32194 22689 2971 21833 52746;52747;52748 61145;61146;61147 61146 3 YFQHLLGK Unmodified 1004.5444 0.54435122 3234 Q9JKR6;F6TRP3;A0A1L1SQ34;E0CYZ2 Hyou1 Hypoxia up-regulated protein 1 yes no 0 0 0 0 11 0 1 61.492 61.492 3 0.00555 16258 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.127 49.906 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22690 3234 21834 52749 61148 61148 1 YFQINQDEEEEEDED Unmodified 1930.7228 0.72284126 1790 P67984 Rpl22 60S ribosomal protein L22 yes yes 0 0 0 0 3 0 1 67.874 67.874 3 0.00019528 24850 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 67.964 66.141 20.292 8.0547 9.1524 0 19.197 19.706 19 9 9 0 19 19 1 1 1 0 1 1 4200 22691 1790 21835 52750 61149 61149 1 YFQTYFLTPSVK Unmodified 1492.7602 0.76021723 1529 P36916 Gnl1 Guanine nucleotide-binding protein-like 1 yes yes 0 0 0 0 11 0 1 80.053 80.053 3 4.2032E-06 24647 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 100.19 63.34 0 0 0 0 0 93 0 0 0 0 0 93 0 0 0 0 0 1 18103 22692 1529 21836 52751 61150 61150 1 YFSFPGELLMR Unmodified 1358.6693 0.66929373 1643 P56564;D3YY51;O35544;A0A1W2P762 Slc1a3;Slc1a6 Excitatory amino acid transporter 1;Amino acid transporter;Excitatory amino acid transporter 4 yes no 0 0 0 0 9.5 0.5 1 1 86.552 86.552 2;3 0.00046754 30303 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.309 61.469 60.088 0 0 20.411 65.414 47.71 56 0 0 19 65 46 2 0 0 1 2 1 7461.9 22693 1643 21837 52752;52753 61151;61152 61151 2 YFSLGLPTGSTPLGCYK Unmodified 1859.9128 0.91277148 708 Q9CRC9;D3YWR1 Gnpda2 Glucosamine-6-phosphate isomerase 2;Glucosamine-6-phosphate isomerase yes no 0 0 0 0 11.5 0.5 1 1 83.151 83.151 3 2.2209E-06 23095 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.43 80.32 86.503 27.993 45.142 0 84.726 0 81 28 42 0 81 0 2 1 1 0 2 0 14035 22694 708 21838 52754;52755 61153;61154 61154 2 YFSQHLPR Unmodified 1046.5298 0.52976378 547 A2RT62 Fbxl16 F-box/LRR-repeat protein 16 yes yes 0 0 0 0 8 0 1 43.468 43.468 3 0.0095338 10792 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 64.207 38.633 0 68.053 66.247 0 66.005 57.813 0 65 65 0 65 56 0 1 1 0 1 1 2286.8 22695 547 21839 52756 61155 61155 1 YFSYDCGADFPGIPLAPPR Unmodified 2141.9881 0.98806169 2123 Q61292 Lamb2 Laminin subunit beta-2 yes yes 0 0 0 0 8 0 1 84.937 84.937 3 0.0079072 30401 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 38.824 32.843 0 29.018 46.304 38.774 0 0 0 28 46 38 0 0 0 1 1 1 0 0 1149.6 22696 2123 21840 52757 61156 61156 1 YFTLGLPTGSTPLGCYQK Unmodified 2001.987 0.98699906 1285 O88958;D3Z0R5 Gnpda1 Glucosamine-6-phosphate isomerase 1 yes no 0 0 0 0 12 0 1 82.901 82.901 3 5.793E-07 22991 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.85 57.775 39.424 0 46.532 68.272 0 0 37 0 46 65 0 0 1 0 1 1 0 0 4398 22697 1285 21841 52758 61157 61157 1 YFTQGNCVNLTEALSLYEEQLGR Unmodified 2704.2803 0.28028055 1845 P97355 Sms Spermine synthase yes yes 0 0 0 0 7 0 1 92.661 92.661 3 7.9906E-12 34309 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 70.994 58.913 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1466.4 22698 1845 21842 52759 61158 61158 1 YFVSEGFELFCAQSFSK Unmodified 2044.9241 0.92406445 1311 P05201 Got1 Aspartate aminotransferase, cytoplasmic yes yes 0 0 0 0 10.5 2.06 2 1 2 3 92.538 92.538 3;4 7.7883E-18 36738 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 125.33 108.03 164.69 188.98 120.75 243.66 183.58 250.53 154 186 122 230 185 241 5 8 5 8 3 6 46377 22699 1311 21843 52760;52761;52762;52763;52764;52765;52766;52767 61159;61160;61161;61162;61163;61164;61165;61166;61167;61168;61169;61170;61171;61172 61169 14 YFYDQCPAVAGYGPIEQLPDYNR Unmodified 2735.2326 0.23260207 2998 Q9CZ13 Uqcrc1 Cytochrome b-c1 complex subunit 1, mitochondrial yes yes 0 0 0 0 7.4 2.87 1 2 1 1 79.429 79.429 3;4 4.4564E-15 29153 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.696 74.585 88.833 107.62 89.716 70.691 84.313 127.65 84 104 85 66 84 122 4 4 3 3 3 4 77609 22700 2998 21844 52768;52769;52770;52771;52772 61173;61174;61175;61176;61177;61178;61179 61176 7 YFYFYNTGLQNQR Unmodified 1712.7947 0.79470526 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 11.5 0.5 1 1 71.659 71.659 2;3 5.2605E-15 18437 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 136.96 121.37 88.745 0 0 0 122.93 75.376 84 0 0 0 120 74 2 0 0 0 1 1 13672 22701 3259 21845 52773;52774 61180;61181 61181 2 YFYLFPNR Unmodified 1118.5549 0.5549159 2871 Q99MK8;Q7TS64;Q8BVT9;Q3UYH7 Adrbk1;Adrbk2 Beta-adrenergic receptor kinase 1;Beta-adrenergic receptor kinase 2 yes no 0 0 0 0 1 0 1 75.001 75.001 2 0.052274 25755 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 62.714 50.867 39.468 46.283 0 80.882 0 39.442 37 46 0 74 0 37 1 1 0 1 0 1 3507.1 22702 2871 21846 52775 61182 61182 1 YGAATANYMEVVSLLK Unmodified 1728.8757 0.87565769 2179 Q64521;A2AQR0 Gpd2 Glycerol-3-phosphate dehydrogenase, mitochondrial;Glycerol-3-phosphate dehydrogenase yes no 0 0 0 0 9 0.816 1 1 1 88.401 88.401 3 5.8492E-08 31159 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 112.24 88.404 53.142 69.596 77.788 0 0 49.036 50 70 76 0 0 46 1 2 2 0 0 1 23047 22703 2179 21847 52776;52777;52778 61183;61184;61185 61184 3 YGDLANWMIPGK Unmodified 1363.6595 0.65945733 3028 Q9D0K2;Q3UJQ9 Oxct1 Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial;Succinyl-CoA:3-ketoacid-coenzyme A transferase yes no 0 0 0 0 9.5 0.5 1 1 81.21 81.21 2;3 1.5775E-07 25658 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 108.47 71.126 60.006 41.706 0 70.362 36.338 53.329 56 43 0 65 37 51 1 2 0 2 1 2 18011 22704 3028 21848 52779;52780 61186;61187 61187 2 YGDLLPADGILIQGNDLK Unmodified 1914.0098 0.0098429899 1096;928 G5E829;A0A1W2P7C7;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase no no 0 0 0 0 6.2 0.748 1 2 2 85.134 85.134 3;4 2.0836E-13 31732 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 118.23 83.324 166.97 166.17 224.06 181.08 134.73 194.2 157 167 222 177 139 185 3 3 3 3 3 3 48013 22705 1096;928 21849 52781;52782;52783;52784;52785 61188;61189;61190;61191;61192;61193 61190 6 YGDLLPADGILIQGNDLK Deamidation (N) 1914.9939 0.99385857 1096;928 G5E829;A0A1W2P7C7;F7AAP4;E9Q828;Q6Q477 Atp2b1;Atp2b4 Plasma membrane calcium-transporting ATPase 1;Calcium-transporting ATPase no no 0 1 0 0 6 0 1 86.97 86.97 3 0.00035401 32620 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 54.288 30.343 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3406 22706 1096;928 21849 52786 61194 61194 253 1 YGDLLPADGLFIQGNDLK Deamidation (N) 1948.9782 0.97820851 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 1 0 0 5.5 0.5 1 1 90.102 90.102 3 5.5326E-06 34319 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.783 48.686 0 14.414 28.826 13.584 0 0 0 14 28 14 0 0 0 2 2 2 0 0 2287.4 22707 1042 21850 52787;52788 61195;61196 61195 274 2 YGDLLPADGLFIQGNDLK Unmodified 1947.9942 0.99419293 1042 Q3UHH0;F8WHB1;Q9R0K7;S4R1C4 Atp2b2 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 2 yes no 0 0 0 0 6.33 0.471 2 1 87.798 87.798 3;4 9.1672E-05 33013 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 57.173 36.805 70.004 35.94 106.31 34.731 46.862 78.613 66 38 102 37 47 75 3 2 3 2 2 3 13006 22708 1042 21850 52789;52790;52791 61197;61198;61199 61198 3 YGDLLPADGVLIQGNDLK Unmodified 1899.9942 0.99419293 487 Q8C048;A2ALL9;Q0VF55 Atp2b3 Calcium-transporting ATPase yes no 0 0 0 0 7.75 3.11 1 1 1 1 82.248 82.248 3 1.6337E-08 30560 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 106.36 80.232 139.02 162.04 64.916 78.696 180.49 96.726 130 159 65 74 176 93 3 4 2 2 4 2 25165 22709 487 21851 52792;52793;52794;52795 61200;61201;61202;61203;61204 61201 5 YGDTWDE Unmodified 884.31883 0.31882754 2965 Q9CRD0 Ociad1 OCIA domain-containing protein 1 yes yes 0 0 0 0 2 0 1 57.193 57.193 2 0.044734 19358 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 77.944 73.824 0 0 20.173 8.6347 0 0 0 0 19 9 0 0 0 0 1 1 0 0 2615.6 22710 2965 21852 52796 61205 61205 1 YGELEEGIDVLDADGNLVGSSK Unmodified 2279.0805 0.08050133 2450 Q925N0;Q8BRQ9 Sfxn5 Sideroflexin-5;Sideroflexin yes no 0 0 0 0 4 0 2 85.57 85.57 3;4 2.3206E-09 32474 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 61.616 46.688 0 14.748 29.411 0 8.727 49.853 0 14 28 0 9 47 0 1 2 0 1 2 10455 22711 2450 21853 52797;52798 61206;61207 61207 2 YGEPGEVFINK Unmodified 1251.6136 0.61355299 2724 Q8VIJ6 Sfpq Splicing factor, proline- and glutamine-rich yes yes 0 0 0 0 5.5 0.5 1 1 63.479 63.479 3 9.7959E-05 21680 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 81.865 57.522 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22712 2724 21854 52799;52800 61208;61209 61209 2 YGFQYISVGELLR Unmodified 1543.8035 0.80347903 2792 Q920P5 Ak5 Adenylate kinase isoenzyme 5 yes yes 0 0 0 0 10 0 1 85.213 85.213 2 0.00053751 27231 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.805 71.132 39.516 36.703 0 0 0 0 37 37 0 0 0 0 1 1 0 0 0 0 3415.7 22713 2792 21855 52801 61210 61210 1 YGFTHLSTGELLR Unmodified 1492.7674 0.76742787 2792 Q920P5;A0A0G2JGN7 Ak5 Adenylate kinase isoenzyme 5 yes no 0 0 0 0 8.5 0.5 1 1 61.496 61.496 3 0.0001556 19311 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 71.219 41.412 0 0 36.479 120.24 0 39.442 0 0 37 112 0 37 0 0 1 2 0 1 14440 22714 2792 21856 52802;52803 61211;61212 61211 2 YGGGEETTTGESENRR Unmodified 1741.7503 0.75033384 1817 P70663 Sparcl1 SPARC-like protein 1 yes yes 0 0 0 1 2 0 1 27.597 27.597 3 0.00025724 6039 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 68.283 53.589 0 20.216 0 0 29.288 0 0 19 0 0 28 0 0 1 0 0 1 0 2551.5 22715 1817 21857 52804 61213 61213 1 YGGTAQSLTLK Unmodified 1137.603 0.60298831 1400 P17426;A0A140LIG7 Ap2a1 AP-2 complex subunit alpha-1 yes no 0 0 0 0 8.5 0.5 1 1 55.806 55.806 2;3 6.4827E-08 15864 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 117.25 59.652 59.281 83.227 65.038 0 0 78.884 56 83 65 0 0 74 1 1 1 0 0 1 12926 22716 1400 21858 52805;52806 61214;61215 61215 2 YGGTFQNVSVK Unmodified 1198.5982 0.59823728 1401 P17427 Ap2a2 AP-2 complex subunit alpha-2 yes yes 0 0 0 0 8.67 0.471 1 2 55.886 55.886 2;3 0.00026368 15913 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.184 65.311 417.72 150.55 358.84 120.19 168.68 392.34 392 158 343 120 167 371 3 2 2 1 2 2 56145 22717 1401 21859 52807;52808;52809 61216;61217;61218 61218 3 YGIDEYLEVK Unmodified 1227.6023 0.60231961 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 8.33 3.4 1 1 1 71.892 71.892 3 0.0010781 26740 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 75.294 44.405 29.679 144.04 111.14 53.144 177.4 123.92 28 139 111 55 176 121 1 3 2 2 3 3 25516 22718 2469 21860 52810;52811;52812 61219;61220;61221 61221 3 YGIEEHGK Unmodified 931.43995 0.43994572 1439 P23242 Gja1 Gap junction alpha-1 protein yes yes 0 0 0 0 6 0 1 37.467 37.467 3 0.011446 9422 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 60.973 57.479 148.31 0 139.91 0 200.84 152.04 139 0 130 0 197 148 1 0 1 0 1 1 7184.5 22719 1439 21861 52813 61222 61222 1 YGILQFDGPL Unmodified 1121.5757 0.57571092 556 A6H630 Armt1 Protein-glutamate O-methyltransferase yes yes 0 0 0 0 10 2.16 1 1 1 93.688 93.688 2 0.0043082 33990 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.496 64.339 0 50.008 0 30.453 8.0151 49.036 0 47 0 28 9 46 0 2 0 1 1 1 4625.9 22720 556 21862 52814;52815;52816 61223;61224;61225 61223 3 YGLAAAVFTK Unmodified 1039.5702 0.57023162 1562 P47738;A0A0G2JEU1;A0A0G2JF60;A0A0G2JFQ0 Aldh2 Aldehyde dehydrogenase, mitochondrial yes no 0 0 0 0 11.3 0.471 2 1 71.744 71.744 2;3 1.4943E-07 18431 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 141.48 107.4 527.68 560.26 120.1 407.41 574.03 504.92 494 560 111 381 580 485 2 3 1 2 3 3 98420 22721 1562 21863 52817;52818;52819 61226;61227;61228;61229 61229 4 YGLFPANYVELR Unmodified 1440.7402 0.74015049 2075 Q921L6;Q60598 Cttn Src substrate cortactin yes no 0 0 0 0 10 1.87 1 1 1 1 77.238 77.238 2 9.7574E-23 23779 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 167.09 97.49 129.27 148.16 131.2 270.78 296.92 174.38 121 148 130 259 297 167 2 4 2 4 4 3 57534 22722 2075 21864 52820;52821;52822;52823 61230;61231;61232;61233;61234 61232 5 YGLIQAAAVATSK Unmodified 1291.7136 0.71360139 2561 Q8CJH3 Plxnb1 Plexin-B1 yes yes 0 0 0 0 11.5 0.5 1 1 70.329 70.329 2 1.7576E-08 20219 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.247 56.951 20.134 28.121 18.769 0 18.538 38.913 19 28 19 0 19 37 1 1 1 0 1 1 2088.4 22723 2561 21865 52824;52825 61235;61236 61235 2 YGLLAAILGDK Unmodified 1132.6492 0.64921022 2859 Q99LC3 Ndufa10 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial yes yes 0 0 0 0 5.86 5.62 4 2 1 95.269 95.269 2;3 5.2901E-10 33085 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 138.08 93.685 141.46 119.51 138.46 136.76 119.97 221.24 133 119 137 133 121 210 6 5 5 7 8 9 77878 22724 2859 21866 52826;52827;52828;52829;52830;52831;52832 61237;61238;61239;61240;61241;61242;61243;61244;61245;61246;61247 61237 11 YGLPVNFQAMLLQPNKK Unmodified 1960.0604 0.060438772 3376 Q9Z1G3 Atp6v1c1 V-type proton ATPase subunit C 1 yes yes 0 0 0 1 8.33 5.19 1 2 80.186 80.186 3;4 3.9866E-06 21676 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.42 67.851 80.064 35.328 132.15 57.316 82.865 38.427 75 37 130 56 83 37 2 1 2 2 2 1 25453 22725 3376 21867 52833;52834;52835 61248;61249;61250 61250 3 YGLVGGEGGK Unmodified 935.47125 0.47124585 2479 Q8BYI9 Tnr Tenascin-R yes yes 0 0 0 0 7.6 1.02 1 1 2 1 50.881 50.881 2;3 3.6886E-07 14959 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 138.06 90.405 341.72 58.839 500.56 418.83 405.31 342.6 321 56 481 415 414 328 3 1 4 4 3 2 59392 22726 2479 21868 52836;52837;52838;52839;52840 61251;61252;61253;61254;61255 61252 5 YGMGTSVER Unmodified 998.44913 0.4491302 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 7.75 3.11 1 1 1 1 40.444 40.444 2 0.0012861 10946 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 103.87 54.454 127.85 130.74 322.7 240.65 187.81 251.55 120 130 316 241 195 241 2 3 4 4 3 3 32281 22727 1520 21869 52841;52842;52843;52844 61256;61257;61258;61259 61257 4 YGNANVWK Unmodified 950.46102 0.46101552 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 9 0.816 1 1 1 53.134 53.134 2 0.0058137 14543 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.65 62.302 117.76 139.97 226.42 131.8 120.35 107.44 111 139 223 135 120 102 2 2 3 3 2 2 27751 22728 1731;1787 21870 52845;52846;52847 61260;61261;61262 61261 3 YGNLSALGFK Unmodified 1068.5604 0.56039521 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 0 10.5 0.5 1 1 70.059 70.059 2 0.00010411 20584 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.05 49.643 202.45 60.498 0 80.882 0 59.696 194 65 0 74 0 56 2 1 0 1 0 1 20725 22729 2890 21871 52848;52849 61263;61264 61263 2 YGNPWEK Unmodified 892.40792 0.40791731 2555;3331 Q8CI94;Q9WUB3;E9PUM3 Pygb;Pygm Glycogen phosphorylase, brain form;Glycogen phosphorylase, muscle form;Alpha-1,4 glucan phosphorylase no no 0 0 0 0 7 0 1 54.372 54.372 2 0.027671 16530 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 97.093 41.417 187.56 172.56 250.55 0 246.86 0 177 178 242 0 236 0 1 1 1 0 1 0 25309 22730 2555;3331 21872 52850 61265 61265 1 YGPGEPSPVSETVVTPEAAPEK Unmodified 2240.0849 0.084858426 456 A2AFG7;A2AFG8;Q6PGJ3;F7A5H7 L1cam yes no 0 0 0 0 3.5 0.5 1 1 62.624 62.624 3;4 0.055155 22214 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 26.21 10.444 59.945 28.427 0 60.707 26.637 23.758 56 28 0 56 28 23 2 1 0 2 1 1 4207.2 22731 456 21873 52851;52852 61266;61267 61267 2 YGPGEPSPVSETVVTPEAAPEKNPVDVR Unmodified 2920.4454 0.44543162 456 A2AFG7;A2AFG8;Q6PGJ3;F7A5H7 L1cam yes no 0 0 0 1 4 0 1 62.262 62.262 4 5.9332E-12 21959 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 62.374 54.928 0 0 28.57 38.738 0 39.442 0 0 28 37 0 37 0 0 1 1 0 1 4852.2 22732 456 21874 52853 61268 61268 1 YGPLSGVNVVYDQR Unmodified 1565.7838 0.78380622 131 A0A0N4SVC2;E9QP00;Q6PFR5 Tra2a Transformer-2 protein homolog alpha yes no 0 0 0 0 8 0 1 65.993 65.993 3 0.023325 21506 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.509 20.913 0 0 46 0 0 0 0 0 46 0 0 0 0 0 1 0 0 0 4991.1 22733 131 21875 52854 61269 61269 1 YGQFSGLNPGGRPITPPR Unmodified 1912.9908 0.9907793 1710 P62137 Ppp1ca Serine/threonine-protein phosphatase PP1-alpha catalytic subunit yes yes 0 0 0 1 10 0 1 54.988 54.988 3 0.0002577 13729 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 58.461 47.022 0 48.508 26.092 29.049 0 39.442 0 46 28 28 0 37 0 1 1 1 0 1 5999.5 22734 1710 21876 52855 61270 61270 1 YGQPIQMK Unmodified 963.48479 0.48478743 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 8 0 1 51.618 51.618 2 0.034354 14635 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.998 34.118 39.701 0 0 0 0 39.442 37 0 0 0 0 37 1 0 0 0 0 1 3975.6 22735 1581 21877 52856 61271 61271 1 YGQVTPLEIDILYQLADLYNASGR Unmodified 2711.3806 0.38064652 2396 Q8BH59 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes yes 0 0 0 0 11 2 1 1 110.55 110.55 3 3.2305E-12 37631 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 71.678 64.056 0 0 3.246 5.4107 2.8895 6.396 0 0 3 5 3 6 0 0 1 1 1 1 1856.8 22736 2396 21878 52857;52858 61272;61273 61272 2 YGSLDVAK Unmodified 851.43888 0.43888309 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 7 1 1 1 53.724 53.724 2 0.0089522 15347 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 96.253 17.137 0 0 136.05 103.38 0 118.33 0 0 130 102 0 111 0 0 1 1 0 1 10014 22737 3449;3451;3452 21879 52859;52860 61274;61275 61275 2 YGSPGNVSK Unmodified 907.43995 0.43994572 3164 Q9EPL8 Ipo7 Importin-7 yes yes 0 0 0 0 7 0 1 40.604 40.604 2 0.042454 10183 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 57.55 30.233 39.283 26.341 47.994 0 0 0 37 28 46 0 0 0 1 1 1 0 0 0 2588.8 22738 3164 21880 52861 61276 61276 1 YGTDLSR Unmodified 810.38718 0.38718187 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 5 0 1 38.057 38.057 2 0.040208 10136 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.146 20.952 0 98.952 0 0 93.965 96.457 0 93 0 0 93 93 0 1 0 0 1 1 22233 22739 2699 21881 52862 61277 61277 1 YGVGFWR Unmodified 883.43407 0.43407249 2843 Q99KI0;A0A2R8W744 Aco2 Aconitate hydratase, mitochondrial yes no 0 0 0 0 10 0 1 63.014 63.014 2 0.015626 17391 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 112.95 79.138 0 107.04 89.166 113.08 155.47 134.14 0 102 93 111 158 130 0 1 1 1 1 1 23130 22740 2843 21882 52863 61278 61278 1 YGVSGYPTLK Unmodified 1083.5601 0.56006086 1470 P27773;F6Q404 Pdia3 Protein disulfide-isomerase A3 yes no 0 0 0 0 9.75 1.92 1 2 1 58.936 58.936 2;3 4.8678E-05 17410 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 114.51 72.117 117.69 223.27 246.16 149.91 186.04 47.411 111 222 242 148 186 46 2 3 3 2 3 1 44612 22741 1470 21883 52864;52865;52866;52867 61279;61280;61281;61282 61281 4 YGYIHLYDLETGTCIYMNR Unmodified 2381.082 0.08203843 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 8 0.816 1 1 1 75.134 75.134 3 6.2445E-08 25742 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 97.933 82.511 39.564 27.124 0 20.767 0 20.254 37 28 0 19 0 19 1 1 0 1 0 1 6123 22742 2185 21884 52868;52869;52870 61283;61284;61285 61284 3 YGYLLANAFVNVLAEPPR Unmodified 2006.0625 0.062547262 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 6.75 5.76 2 1 1 99.086 99.086 3 6.254E-46 33710 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 153.95 131.52 66.418 19.828 24.568 17.029 18.945 38.901 62 22 24 16 19 37 4 4 5 3 3 4 16716 22743 331 21885 52871;52872;52873;52874 61286;61287;61288;61289;61290;61291;61292;61293;61294 61286 9 YGYTHLSAGELLR Unmodified 1478.7518 0.75177781 3130 Q9DBP5;A0A0R4J093 Cmpk1 UMP-CMP kinase yes no 0 0 0 0 8 0 1 56.927 56.927 3 0.021752 17179 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 41.092 14.419 48.307 33.634 148.14 0 0 78.884 46 37 139 0 0 74 1 1 1 0 0 1 9046.7 22744 3130 21886 52875 61295 61295 1 YHAEEVEER Unmodified 1160.5098 0.5098162 2993 Q9CYA6 Zcchc8 Zinc finger CCHC domain-containing protein 8 yes yes 0 0 0 0 1 0 1 30.12 30.12 3 0.0071434 6828 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 59.908 44.246 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22745 2993 21887 52876 61296 61296 1 YHALLIPSCPGALTDLASSGSLAR Unmodified 2469.2686 0.26859365 2359 Q8BFQ8 Pddc1 Parkinson disease 7 domain-containing protein 1 yes yes 0 0 0 0 9.5 0.5 1 1 75.295 75.295 3 1.6201E-10 25063 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 68.42 54.995 0 29.792 0 28.837 0 0 0 28 0 28 0 0 0 1 0 2 0 0 8724.5 22746 2359 21888 52877;52878 61297;61298 61297 2 YHEALAK Unmodified 830.42865 0.42865276 1336 P09671 Sod2 Superoxide dismutase [Mn], mitochondrial yes yes 0 0 0 0 8.67 3.09 1 1 1 37.253 37.253 2;3 0.0042093 9444 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 105.39 49.133 621.3 125.36 854.55 640.41 957.99 701.01 583 120 826 649 967 682 2 1 3 3 3 2 114740 22747 1336 21889 52879;52880;52881 61299;61300;61301 61299 3 YHEDFEK Unmodified 966.40831 0.40831125 3134 Q9DC07;F6RM14;B7ZCI2;F6X9B6;A2AQB2;A2AQA9;E9Q1W3 Nebl;Neb LIM zinc-binding domain-containing Nebulette yes no 0 0 0 0 5 0 1 41.398 41.398 3 0.0044029 11801 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 104.21 39.451 127.22 157.45 124.57 134.67 0 187.62 120 158 130 130 0 176 1 1 1 1 0 1 12955 22748 3134 21890 52882 61302 61302 1 YHEEFEK Unmodified 980.42396 0.42396131 2140 Q61792;A2A6G9;A2A6H0;A2A6G7;A2A6G8 Lasp1 LIM and SH3 domain protein 1 yes no 0 0 0 0 5.5 0.5 1 1 40.956 40.956 3 0.014135 11616 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 70.69 37.312 188.45 0 246.8 219.18 232.89 235.34 177 0 238 218 240 227 1 0 1 1 1 1 15143 22749 2140 21891 52883;52884 61303;61304 61303 2 YHEQLSTQSLIELFESFK Unmodified 2198.0895 0.089549874 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.83 1.57 1 2 2 1 95.476 95.476 3;4 2.372E-07 34467 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.441 53.523 59.521 44.009 163.11 28.764 204.7 186.32 56 43 153 28 201 177 2 2 4 1 6 4 38130 22750 2185 21892 52885;52886;52887;52888;52889;52890 61305;61306;61307;61308;61309;61310;61311;61312 61305 8 YHFFLYK Unmodified 1016.512 0.51198846 3361;2776 Q91YR1;Q9Z0P5;A0A1L1STC8;A0A1L1SU53 Twf1;Twf2 Twinfilin-1;Twinfilin-2 no no 0 0 0 0 9.25 4.82 1 1 1 1 63.689 63.689 3 0.002269 17086 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 119.7 78.672 197.85 260.31 268.06 269.4 154.81 197.21 185 255 264 264 148 185 2 3 3 2 2 2 117490 22751 2776;3361 21893 52891;52892;52893;52894 61313;61314;61315;61316;61317 61314 5 YHGHSMSDPGVSYR Unmodified 1591.6838 0.6837746 1520 P35486 Pdha1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial yes yes 0 0 0 0 5 0 1 34.803 34.803 4 0.015905 8620 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 40.941 17.337 48.725 25.084 85.116 65.972 0 0 46 28 83 65 0 0 1 1 1 1 0 0 1888.4 22752 1520 21894 52895 61318 61318 1 YHIQVCTTTPCMLR Unmodified 1778.8266 0.82661579 3074 Q9D6J6;M0QWP9 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial yes no 0 0 0 0 8.5 0.5 1 1 55.106 55.106 3 0.00064792 15549 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.394 48.758 59.862 44.908 0 0 0 99.138 56 46 0 0 0 93 1 1 0 0 0 1 4620.6 22753 3074 21895 52896;52897 61319;61320 61320 2 YHLPYPEAIFEISYFK Unmodified 2016.0033 0.003301049 2702 Q8VDQ8;A0A140LHL5 Sirt2 NAD-dependent protein deacetylase sirtuin-2 yes no 0 0 0 0 8 0 1 87.972 87.972 4 0.012663 31738 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 39.509 21.371 20.297 17.783 0 0 0 0 19 18 0 0 0 0 1 1 0 0 0 0 1435.6 22754 2702 21896 52898 61321 61321 1 YHNVGLSK Unmodified 916.47667 0.47666558 2079 Q60668;F6ZV59;G5E8G0;G3X9W0;F6SHF3;F7A465 Hnrnpd Heterogeneous nuclear ribonucleoprotein D0 yes no 0 0 0 0 8.5 0.5 1 1 39.755 39.755 3 0.0067608 8736 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.954 35.993 326.63 145.45 163.28 355.56 162.16 400.45 306 148 168 337 169 380 2 1 1 2 1 2 31468 22755 2079 21897 52899;52900 61322;61323 61323 2 YHPDKNPDNPEAADK Unmodified 1709.7645 0.76452734 1682 P60904;G5E8T0;A2AUE1 Dnajc5 DnaJ homolog subfamily C member 5 yes no 0 0 0 1 4.5 0.5 1 1 40.63 40.63 4 5.317E-05 11976 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 71.98 49.97 452.09 282.47 421.93 491.66 358.52 408.71 425 290 424 479 374 393 3 1 2 3 2 2 21247 22756 1682 21898 52901;52902 61324;61325;61326 61324 3 YHQLQSR Unmodified 930.46716 0.46716353 965 E9QN14;F8VPQ4;Q812A2 Srgap3 SLIT-ROBO Rho GTPase-activating protein 3 yes no 0 0 0 0 7 0 1 25.837 25.837 3 0.0089253 3957 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.741 46.437 0 29.243 32.87 0 19.197 19.706 0 28 32 0 19 19 0 1 1 0 1 1 2603.3 22757 965 21899 52903 61327 61327 1 YHSLAPMYYR Unmodified 1299.607 0.60702783 1514;2921;1683 Q9CQD1;P35278;Q8C266;P61021 Rab5a;Rab5c;Rab5b Ras-related protein Rab-5A;Ras-related protein Rab-5C;Ras-related protein Rab-5B no no 0 0 0 0 9.5 0.5 1 1 48.344 48.344 3 0.0023973 12359 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 63.283 53.053 217.3 117.59 168.28 219.67 165.48 123.2 204 120 167 213 167 120 2 1 1 2 1 1 18534 22758 2921;1514;1683 21900 52904;52905 61328;61329 61328 2 YHTEIVFAR Unmodified 1134.5822 0.58219329 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7 0.816 1 1 1 47.633 47.633 3 5.423E-07 14269 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 158.87 98.075 245.84 155.41 383.9 374.9 352.72 223.05 231 157 380 370 361 213 2 2 3 3 3 1 115470 22759 2699 21901 52906;52907;52908 61330;61331;61332 61330 3 YHTINGHNAEVR Deamidation (N) 1410.664 0.66402543 1271 O88569;A0A0N4SUM2 Hnrnpa2b1 Heterogeneous nuclear ribonucleoproteins A2/B1 yes no 0 1 0 0 6.5 3.77 2 1 1 31.456 31.456 4 3.3416E-05 7719 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 95.094 74.89 48.91 92.741 110.58 193.24 126.24 58.427 46 92 111 185 129 56 1 2 2 3 2 1 33509 22760 1271 21902 52909;52910;52911;52912 61333;61334;61335;61336 61334 346 4 YHTSQSGDEMTSLSEYVSR Unmodified 2175.9379 0.93787661 1354 P11499;E9Q0C3 Hsp90ab1 Heat shock protein HSP 90-beta yes no 0 0 0 0 4 0 1 56.096 56.096 3 4.6842E-08 19189 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 100.21 95.105 20.387 0 0 40.441 0 0 19 0 0 37 0 0 1 0 0 1 0 0 13716 22761 1354 21903 52913 61337 61337 1 YHWMYPGSK Unmodified 1167.5172 0.51715019 451 P35803;A2AEG6;H3BIV8 Gpm6b Neuronal membrane glycoprotein M6-b no no 0 0 0 0 11 0 1 53.46 53.46 3 0.0014758 12972 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 78.516 58.858 60.088 0 0 0 67.99 0 56 0 0 0 65 0 1 0 0 0 1 0 6016.6 22762 451 21904 52914 61338 61338 1 YHYLGGR Unmodified 864.42424 0.42423608 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 0 10 2.16 1 1 1 33.841 33.841 3 0.0032522 6550 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 111.69 63.126 237.61 119.04 0 217.08 254.98 173.67 222 120 0 203 259 167 2 1 0 3 3 2 33479 22763 2617 21905 52915;52916;52917 61339;61340;61341 61339 3 YIADFSLFDQVVK Unmodified 1543.7922 0.79224564 3247 Q9JM63 Kcnj10 ATP-sensitive inward rectifier potassium channel 10 yes yes 0 0 0 0 8.5 0.5 1 1 91.063 91.063 3 0.00013409 32281 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.466 41.458 20.246 20.216 23.702 0 76.645 22.101 19 19 22 0 74 22 1 1 1 0 2 1 6262.7 22764 3247 21906 52918;52919 61342;61343 61343 2 YIAENGTDPINNQPLSEEQLIDIK Deamidation (N) 2714.3287 0.32867053 2847 Q99KP6 Prpf19 Pre-mRNA-processing factor 19 yes yes 0 1 0 0 3.5 0.5 1 1 82.627 82.627 3;4 6.1311E-10 30858 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 66.871 52.71 9.5809 6.6829 7.1247 19 0 7.462 9 7 7 19 0 7 1 1 1 1 0 1 2416.3 22765 2847 21907 52920;52921 61344;61345 61344 1013 2 YIAIASTTVETAEPEKEVEPALELLEPIDQK Unmodified 3425.7705 0.77051373 1595 P50396 Gdi1 Rab GDP dissociation inhibitor alpha yes yes 0 0 0 1 6.67 2.98 1 2 1 1 1 90.958 90.958 4;5 5.8025E-19 34618 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.695 70.536 77.48 62.004 103.1 77.879 65.477 60.425 73 62 100 75 65 57 6 5 6 6 4 4 65310 22766 1595 21908 52922;52923;52924;52925;52926;52927 61346;61347;61348;61349;61350;61351;61352;61353;61354;61355 61348 10 YIAIVSTTVETK Unmodified 1323.7286 0.72858275 2132 Q61598;A0A1Y7VLG4 Gdi2 Rab GDP dissociation inhibitor beta yes no 0 0 0 0 8 0 1 69.344 69.344 3 0.061522 22964 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 34 9.6185 29.605 57.163 25.421 29.089 0 0 28 56 28 28 0 0 1 1 1 1 0 0 3350.4 22767 2132 21909 52928 61356 61356 1 YIATPIFSK Unmodified 1038.575 0.57498264 1347 P10649;A2AE89;F6WHQ7 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 9.43 3.66 1 1 2 1 1 1 70.038 70.038 2;3 2.8052E-05 17716 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 144.09 78.837 915.09 978.31 403.16 1222.6 869.89 808.46 858 975 389 1141 888 769 6 7 3 6 6 7 959430 22768 1347 21910 52929;52930;52931;52932;52933;52934;52935 61357;61358;61359;61360;61361;61362;61363;61364;61365;61366 61364 10 YICDNQDTISSK Unmodified 1442.6348 0.63475872 656 CON__P02769 yes yes 0 0 0 0 5 0 1 51.559 51.559 3 0.0001631 16759 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.522 43.675 28.856 15.148 186.74 59.099 43.394 58.458 28 19 176 65 46 56 1 1 1 1 1 1 6753.4 + 22769 656 21911 52936 61367 61367 1 YICGEAPDYDR Unmodified 1357.5609 0.5608655 1584 P48774;E9PVM7;E9Q024 Gstm5 Glutathione S-transferase Mu 5 yes no 0 0 0 0 7.33 4.03 1 1 1 48.78 48.78 2 7.7205E-10 15739 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 135.63 88.285 236.65 98.697 177.32 134.67 136.89 67.416 222 102 176 130 139 65 3 2 3 2 3 1 48103 22770 1584 21912 52937;52938;52939 61368;61369;61370 61368 3 YICPHAPR Unmodified 1012.4913 0.49126979 3319 Q9WTL7 Lypla2 Acyl-protein thioesterase 2 yes yes 0 0 0 0 10.5 2.5 1 1 34.854 34.854 3 0.0081706 6955 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.032 45.504 118.2 65.854 96.551 83.637 148 86.464 111 65 93 83 148 83 2 1 1 1 2 1 17442 22771 3319 21913 52940;52941 61371;61372 61371 2 YICYADQTR Unmodified 1188.5234 0.52335778 1977 Q3UHB1;A0A1W2P799 Nt5dc3 5'-nucleotidase domain-containing protein 3 yes no 0 0 0 0 7 0 1 46.786 46.786 2 0.028068 13012 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.589 37.518 20.244 28.427 0 30.604 0 0 19 28 0 28 0 0 1 1 0 1 0 0 2434.1 22772 1977 21914 52942 61373 61373 1 YIDCDLNR Unmodified 1067.4706 0.47059393 2660 Q8R3P0;B0QZP3;V9GXG0;D6RJ20 Aspa Aspartoacylase yes no 0 0 0 0 4 0 1 47.866 47.866 2 0.019852 15235 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 78.334 58.857 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2616 22773 2660 21915 52943 61374 61374 1 YIDDEDLDR Unmodified 1152.4935 0.49349744 303 A0A1L1SSX5;Q8R149 Bud13 BUD13 homolog yes no 0 0 0 0 1 0 1 51.205 51.205 2 0.0037687 15487 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 89.08 43.919 0 29.792 0 30.604 0 0 0 28 0 28 0 0 0 1 0 1 0 0 2001.3 22774 303 21916 52944 61375 61375 1 YIDITRPQEAK Unmodified 1332.7038 0.70376498 2583 Q8K0T0 Rtn1 Reticulon-1 yes yes 0 0 0 1 10 3 1 1 51.194 51.194 3 0.0023436 15229 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.815 48.975 246.14 224.5 280.34 129.07 372.65 276.12 232 231 278 130 371 269 2 2 2 1 2 2 27107 22775 2583 21917 52945;52946 61376;61377 61376 2 YIDQEELNK Unmodified 1150.5506 0.55061839 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 0 0 0 6.6 3.38 2 1 1 1 54.124 54.124 2;3 7.6888E-18 18023 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 182.98 89.718 583.5 629.93 698.76 549.75 692.91 527.6 550 640 700 553 701 508 4 5 4 4 4 3 355040 22776 1322;1354 21918 52947;52948;52949;52950;52951 61378;61379;61380;61381;61382;61383 61383 6 YIDQEELNK Deamidation (N) 1151.5346 0.53463397 1322;1354 P07901;P11499;E9Q3D6 Hsp90aa1;Hsp90ab1 Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-beta no no 0 1 0 0 4 0 1 54.795 54.795 3 0.031653 18576 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 55.567 17.274 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 2544 22777 1322;1354 21918 52952 61384 61384 394 1 YIDSTDLEPSTLQEEPVR Unmodified 2091.0008 0.0007944461 1820 P70698 Ctps1 CTP synthase 1 yes yes 0 0 0 0 2 0 1 67.533 67.533 3 0.00027141 24386 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 51.535 40.591 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 1143.6 22778 1820 21919 52953 61385 61385 1 YIEDAIGESAK Unmodified 1194.5768 0.57683314 1944 Q3TXX4;A0A1B0GRU0 Slc17a7 Vesicular glutamate transporter 1 yes no 0 0 0 0 6.17 3.13 2 2 1 1 61.398 61.398 2;3 1.733E-08 21648 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 130.98 102.58 177.74 231.17 224.98 140.7 198.72 290.68 167 231 222 139 203 278 3 5 4 4 4 5 102570 22779 1944 21920 52954;52955;52956;52957;52958;52959 61386;61387;61388;61389;61390;61391 61386 6 YIEDEDYYK Unmodified 1236.5186 0.51864956 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 0 3.5 0.5 1 1 57.577 57.577 3 0.00054259 19819 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.551 74.236 69.344 47.357 162.39 120.7 99.535 46.957 65 46 158 121 102 46 1 1 2 2 2 1 13251 22780 3261 21921 52960;52961 61392;61393 61393 2 YIEESAASK Unmodified 996.47639 0.47639081 3395 Q9Z2I0 Letm1 LETM1 and EF-hand domain-containing protein 1, mitochondrial yes yes 0 0 0 0 5 0 1 46.246 46.246 2 0.0035966 14165 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 88.177 29.573 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22781 3395 21922 52962 61394 61394 1 YIEIYVQK Unmodified 1054.5699 0.56989727 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.75 1.85 1 1 2 2 1 1 67.265 67.265 2;3 2.3639E-11 16699 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 136.16 82.989 912.33 439.43 549.75 856.64 694.91 1065.4 855 444 531 814 715 1018 7 6 3 7 5 8 147020 22782 2185 21923 52963;52964;52965;52966;52967;52968;52969;52970 61395;61396;61397;61398;61399;61400;61401;61402;61403;61404 61403 10 YIESPVLFLR Unmodified 1235.6914 0.69140938 1965 Q3UDE2 Ttll12 Tubulin--tyrosine ligase-like protein 12 yes yes 0 0 0 0 9 0 1 79.58 79.58 2 0.0032285 27180 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 74.173 40.376 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22783 1965 21924 52971 61405 61405 1 YIETSELCGGAR Unmodified 1354.6187 0.61871473 815;2590 E9PUD2;Q8K1M6;A0A2U3TZ67 Dnm1l Dynamin-1-like protein no no 0 0 0 0 8 3.56 1 1 1 52.374 52.374 2 2.4516E-21 17198 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 161.17 122.87 138.85 36.703 76.528 108.66 99.922 154.92 130 37 74 102 102 148 3 1 2 2 2 3 22562 22784 815;2590 21925 52972;52973;52974 61406;61407;61408 61406 3 YIFGAQVAPATK Unmodified 1264.6816 0.68157298 64 A0A0A6YY37;A0A0A6YY09;A0A0A6YWY8;F8VPK8;A0A0A6YWM0 Pcdh9 yes no 0 0 0 0 10 0 1 65.304 65.304 2 1.7138E-06 18300 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 89.047 66.218 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22785 64 21926 52975 61409 61409 1 YIGPLTITPTVALIGLSGFQAAGER Unmodified 2544.3952 0.39517437 3166 Q9EPR4 Slc23a2 Solute carrier family 23 member 2 yes yes 0 0 0 0 11.7 0.471 1 2 101.98 101.98 3;4 1.0355E-20 28804 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 87.468 71.702 0 0 0 6 3 0 0 0 0 6 3 0 0 0 0 1 1 0 2679.1 22786 3166 21927 52976;52977;52978 61410;61411;61412 61412 3 YIHSANVLHR Unmodified 1208.6414 0.6414395 1769;769 P63085;E9PXX5;E9Q3I6;Q61532;D3Z3G6;Q63844;A0A0U1RPX4;D3Z6D8;A0A0U1RPZ0 Mapk1;Mapk4;Mapk6;Mapk3 Mitogen-activated protein kinase 1;Mitogen-activated protein kinase 6;Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 no no 0 0 0 0 8 0 2 35.725 35.725 3;4 0.00090375 7281 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.228 51.996 0 177.2 29.112 111.49 56.581 196.66 0 167 28 102 56 186 0 2 1 1 1 2 20393 22787 1769;769 21928 52979;52980 61413;61414 61413 2 YIIIGDTGVGK Unmodified 1134.6285 0.62847478 1617 P53994;Q3TEG7;P59279;G3UXQ7;G3V022 Rab2a;Rab2b Ras-related protein Rab-2A;Ras-related protein Rab-2B yes no 0 0 0 0 10 2.16 1 1 1 67.999 67.999 2 7.96E-26 21748 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 182.65 103.53 128.36 79.657 0 230.79 107.12 273.04 120 83 0 213 111 259 1 1 0 2 1 2 29629 22788 1617 21929 52981;52982;52983 61415;61416;61417 61416 3 YIILGSAVGGGYTAK Unmodified 1468.7926 0.79257999 1653 P58281;H7BX01;E0CXD1 Opa1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 yes no 0 0 0 0 6.5 5.5 1 1 71.579 71.579 3 2.3891E-07 18265 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.46 79.551 217.01 179.03 190.27 289.16 73.167 87.456 204 185 195 274 75 84 2 3 2 2 2 2 15409 22789 1653 21930 52984;52985 61418;61419;61420 61420 3 YIIWSPVCR Unmodified 1192.6063 0.60629955 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 0 12 0 1 71.372 71.372 2 0.0097294 18340 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.738 49.224 0 59.584 0 0 133.07 84.681 0 56 0 0 130 83 0 1 0 0 1 1 12420 22790 54 21931 52986 61421 61421 1 YILDYLR Unmodified 954.51747 0.51746776 221;2043 A0A0R4J2B2;Q6WVG3;Q5DTY9 Kctd12;Kctd16 BTB/POZ domain-containing protein KCTD12;BTB/POZ domain-containing protein KCTD16 no no 0 0 0 0 10 0 1 74.355 74.355 2 0.021458 22434 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 105.39 50.865 102.65 103.31 152.61 42.529 0 118.33 97 106 149 42 0 111 2 2 2 1 0 2 34767 22791 221;2043 21932 52987 61422;61423 61422 2 YILICGFWDK Unmodified 1313.6478 0.64783001 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 12 0 1 88.305 88.305 2 0.0062547 25136 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 73.248 35.162 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 973.56 22792 3165 21933 52988 61424 61424 1 YILQGFFRPSETVGDLR Unmodified 1997.0371 0.037060793 2677 Q8VBT9 Aspscr1 Tether containing UBX domain for GLUT4 yes yes 0 0 0 1 12 0 1 76.953 76.953 3 0.015226 20738 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.095 22.517 49.128 45.631 0 0 0 0 46 46 0 0 0 0 1 1 0 0 0 0 6493.6 22793 2677 21934 52989 61425 61425 1 YIMAGFPVCPK Unmodified 1281.625 0.62498608 1927 Q3TIU4 Pde12 2',5'-phosphodiesterase 12 yes yes 0 0 0 0 11 0 1 73.732 73.732 3 0.00060978 21747 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 73.985 50.749 0 39.368 0 0 0 49.036 0 37 0 0 0 46 0 1 0 0 0 1 2324.6 22794 1927 21935 52990 61426 61426 1 YINENLIINTDELGR Unmodified 1775.9054 0.90537792 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 5.67 0.471 1 2 74.728 74.728 2;3 5.1218E-17 27602 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 128.71 84.575 79.806 66.401 56.2 57.927 111.83 46.91 75 66 56 56 111 46 3 2 2 2 3 2 16566 22795 1356 21936 52991;52992;52993 61427;61428;61429 61427 3 YINEQYEK Unmodified 1085.5029 0.50293991 3384;402 A0A2R8W6V9;A0A2R8VHB2;Q9Z1S5 Sept3 Neuronal-specific septin-3 no no 0 0 0 0 7.75 3.11 1 1 1 1 48.763 48.763 2;3 0.0012252 15417 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.1 80.538 414.13 193.31 385.71 264.08 443.47 287.47 389 204 380 259 445 278 4 3 4 2 4 3 48776 22796 402;3384 21937 52994;52995;52996;52997 61430;61431;61432;61433 61433 4 YIQAACK Unmodified 852.41637 0.41637351 2185 Q68FD5;Q5SXR6 Cltc Clathrin heavy chain 1;Clathrin heavy chain yes no 0 0 0 0 9.83 2.11 1 1 1 1 1 1 44.873 44.873 2 0.0085677 12248 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 126.24 63.401 890.57 756.28 467.88 709.97 758.27 861.82 835 762 469 683 767 827 6 6 4 5 5 5 226130 22797 2185 21938 52998;52999;53000;53001;53002;53003 61434;61435;61436;61437;61438;61439;61440;61441 61434 8 YIQHTYR Unmodified 979.48756 0.48756462 2889 Q99PT1 Arhgdia Rho GDP-dissociation inhibitor 1 yes yes 0 0 0 0 8.33 1.89 1 1 2 1 1 31.053 31.053 2;3 0.0054174 4229 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.51 52.09 134.49 164.86 123.66 141.91 213.17 157.43 126 162 126 139 214 153 4 4 3 4 5 4 91267 22798 2889 21939 53004;53005;53006;53007;53008;53009 61442;61443;61444;61445;61446;61447 61447 6 YIQLTQLK Unmodified 1005.5859 0.58588168 3071 Q9D6E4 Ttc9b Tetratricopeptide repeat protein 9B yes yes 0 0 0 0 10.5 0.5 1 1 66.862 66.862 2 0.0035688 18553 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 122.52 63.535 69.468 93.673 35.562 109.37 0 108.73 65 93 37 102 0 102 1 2 1 2 0 2 7083.6 22799 3071 21940 53010;53011 61448;61449 61449 2 YISAPEK Unmodified 806.41742 0.41741937 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 6 0 1 48.528 48.528 3 0.01932 14637 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.803 42.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22800 1275 21941 53012 61450 61450 1 YISDSMNWLNSK Unmodified 1456.6657 0.66566492 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 0 9.5 0.5 1 1 76.281 76.281 3 0.0029231 25507 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.252 30.373 117.84 42.03 176.17 31.662 34.572 117.34 111 46 167 37 37 111 2 1 2 1 1 2 7631.9 22801 1581 21942 53013;53014 61451;61452 61451 2 YISKPENLK Unmodified 1090.6023 0.60226003 1888;3109 Q9DB16;Q06138 Cab39l;Cab39 Calcium-binding protein 39-like;Calcium-binding protein 39 no no 0 0 0 1 10 0 1 50.388 50.388 3 0.037534 11810 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 53.683 25.284 54.234 40.226 48.171 97.078 90.381 70.975 51 42 51 93 93 69 1 1 1 1 1 1 5414.2 22802 3109;1888 21943 53015 61453 61453 1 YITDWQNVFR Unmodified 1340.6513 0.65133548 1361 P12815 Pdcd6 Programmed cell death protein 6 yes yes 0 0 0 0 10.7 1.7 1 1 1 78.925 78.925 2 0.00060024 30292 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 95.523 66.374 59.644 152.83 37.075 111.49 0 255.84 56 148 37 102 0 240 1 3 1 2 0 3 35270 22803 1361 21944 53016;53017;53018 61454;61455;61456 61456 3 YITGDQLGALYQDFVR Unmodified 1857.9261 0.92611336 1399 P17183;A0A0N4SUX5;D3Z6E4 Eno2 Gamma-enolase;Enolase yes no 0 0 0 0 9.18 2.25 1 2 2 2 1 1 2 88.787 88.787 2;3 2.1257E-51 34972 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 188.09 163.24 262.18 337.99 260.52 340.4 424.99 462.49 246 333 260 329 427 444 5 8 7 7 7 8 537640 22804 1399 21945 53019;53020;53021;53022;53023;53024;53025;53026;53027;53028;53029 61457;61458;61459;61460;61461;61462;61463;61464;61465;61466;61467;61468;61469;61470 61470 14 YITPDQLADLYK Unmodified 1438.7344 0.73439641 1398 P17182;Q6PHC1 Eno1 Alpha-enolase yes no 0 0 0 0 9 2.17 1 3 1 2 1 1 1 1 79.418 79.418 2;3;4 4.6129E-20 28325 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 152.64 106.64 2650.8 2472.3 2454.7 1307.6 3144.4 3129.5 2495 2520 2431 1277 3152 3012 15 15 9 8 14 11 913040 22805 1398 21946 53030;53031;53032;53033;53034;53035;53036;53037;53038;53039;53040 61471;61472;61473;61474;61475;61476;61477;61478;61479;61480;61481;61482;61483;61484;61485;61486;61487;61488 61475 18 YIVDADDR Unmodified 965.44543 0.44542503 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 7.33 4.03 1 1 1 45.889 45.889 2 0.013425 14338 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 87.251 36.353 227.2 0 226.46 122.42 0 307.01 213 0 213 120 0 288 3 0 2 2 0 3 39591 22806 1147 21947 53041;53042;53043 61489;61490;61491 61489 3 YIVFVEGYPLTISGK Unmodified 1684.9076 0.90760975 2688 Q8VCW8 Acsf2 Acyl-CoA synthetase family member 2, mitochondrial yes yes 0 0 0 0 9.67 0.471 1 2 86.953 86.953 2;3 0.0010193 30512 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.598 38.459 0 0 0 0 46.807 38.106 0 0 0 0 46 37 0 0 0 0 1 1 6245.8 22807 2688 21948 53044;53045;53046 61492;61493;61494 61492 3 YIVNGSHEANK Deamidation (N) 1231.5833 0.5833155 1661 P59325;Q8BVV6;A0A1Y7VNP4;A0A1Y7VJG2 Eif5 Eukaryotic translation initiation factor 5 yes no 0 1 0 0 5.5 0.5 1 1 42.69 42.69 3 7.9644E-05 12425 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 84.658 61.741 48.493 74.085 82.609 56.285 0 78.884 46 74 83 56 0 74 1 1 1 1 0 1 5215.7 22808 1661 21949 53047;53048 61495;61496 61495 636 2 YIVPMITVDGK Unmodified 1234.6631 0.66314572 3214 Q9JII6 Akr1a1 Alcohol dehydrogenase [NADP(+)] yes yes 0 0 0 0 11 1.41 2 1 76.626 76.626 2;3 0.029815 23373 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.79 13.485 0 88.919 27.323 29.725 85.453 0 0 84 28 28 83 0 0 2 1 1 2 0 8931.6 22809 3214 21950 53049;53050;53051 61497;61498;61499 61498 3 YIVQVDGK Unmodified 920.49673 0.49673232 2277 Q791T5;D3YXC2 Mtch1 Mitochondrial carrier homolog 1 yes no 0 0 0 0 8 0 1 56.439 56.439 2 0.010378 16917 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 82.75 11.391 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22810 2277 21951 53052 61500 61500 1 YIVSGTPTFVPYLIK Unmodified 1696.944 0.94399526 331 A0A1W2P7Y9;Q810U4 Nrcam Neuronal cell adhesion molecule yes no 0 0 0 0 11.2 0.829 1 1 2 87.55 87.55 3;4 1.8471E-11 27788 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 120.14 95.201 105.15 97.277 100.2 30.117 211.74 187.83 98 93 98 28 209 181 3 2 2 1 5 4 123820 22811 331 21952 53053;53054;53055;53056 61501;61502;61503;61504;61505;61506 61502 6 YIVTCAVVQR Unmodified 1207.6383 0.63832796 1638 P56387 Dynlt3 Dynein light chain Tctex-type 3 yes yes 0 0 0 0 10.7 1.7 1 1 1 54.993 54.993 2 0.00010754 13790 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 103.8 82.529 187.25 102.85 181.43 42.296 176.54 272.12 176 102 176 46 176 260 3 1 3 1 2 3 22532 22812 1638 21953 53057;53058;53059 61507;61508;61509 61508 3 YIYFYEK Unmodified 1024.4906 0.49058431 3174 Q9EQH3 Vps35 Vacuolar protein sorting-associated protein 35 yes yes 0 0 0 0 9 0 2 68.683 68.683 2;3 0.029079 21973 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.577 30.179 0 96.59 141.27 74.778 0 137.51 0 93 139 74 0 129 0 2 2 1 0 2 13724 22813 3174 21954 53060;53061 61510;61511 61510 2 YKAEDEK Unmodified 881.41306 0.41306227 1762 P63017;Q504P4 Hspa8 Heat shock cognate 71 kDa protein yes no 0 0 0 1 6 0 1 36.215 36.215 3 0.050905 8829 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 68.735 15.263 1143 1051.7 1407.8 1268.5 1489.2 1387 1078 1083 1417 1263 1525 1341 1 1 1 1 1 1 109980 22814 1762 21955 53062 61512 61512 1 YKDAIHFYNK Unmodified 1297.6455 0.64552182 2092 Q60864 Stip1 Stress-induced-phosphoprotein 1 yes yes 0 0 0 1 9 0 1 52.765 52.765 4 0.011108 14468 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 55.353 31.748 158.4 328.52 331.18 387.77 358.07 385.27 151 324 341 379 372 371 1 1 1 1 1 1 31659 22815 2092 21956 53063 61513 61513 1 YKDIIDSFYQEQK Unmodified 1675.8094 0.80935227 2890 Q99PU5 Acsbg1 Long-chain-fatty-acid--CoA ligase ACSBG1 yes yes 0 0 0 1 8 0 1 73.474 73.474 4 0.0026007 24908 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.434 38.612 0 87.421 53.303 45.893 64.261 47.202 0 83 56 46 65 46 0 1 1 1 1 1 3284.6 22816 2890 21957 53064 61514 61514 1 YKEEYAVLISEAQAIK Unmodified 1853.9775 0.97748023 3204 Q9JHU4;F6ZX84 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes no 0 0 0 1 10.5 2.5 1 1 78.918 78.918 3;4 3.2581E-05 27973 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.772 55.48 39.392 46.104 74.644 55.205 82.633 48.015 37 47 74 56 83 46 1 2 2 2 2 1 7030.8 22817 3204 21958 53065;53066 61515;61516 61515 2 YKPAPLATLPSTLDPAEYDVSPETR Unmodified 2730.3752 0.37522679 2920 Q9CQC7 Ndufb4 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 yes yes 0 0 0 1 10.5 2.6 1 1 2 74.925 74.925 3;4 5.3366E-12 26360 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 69.649 57.215 98.918 86.945 115.03 76.883 63.157 137.02 93 84 111 75 65 130 3 2 2 2 2 3 32482 22818 2920 21959 53067;53068;53069;53070 61517;61518;61519;61520 61517 4 YKPAVNQIECHPYLTQEK Unmodified 2217.0888 0.088838367 1548 P45376 Akr1b1 Aldose reductase yes yes 0 0 0 1 8 0.816 1 1 1 54.371 54.371 4 2.8249E-06 14995 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.584 54.993 188.13 85.465 78.26 79.874 53.605 126.39 176 93 74 74 56 120 3 3 2 1 1 3 20011 22819 1548 21960 53071;53072;53073 61521;61522;61523;61524 61524 4 YKPLFDYFIK Unmodified 1332.7118 0.71181048 2459 Q8BU30 Iars Isoleucine--tRNA ligase, cytoplasmic yes yes 0 0 0 1 12 0 1 80.492 80.492 3 0.0029345 21882 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 77.305 43.419 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2381.8 22820 2459 21961 53074 61525 61525 1 YKQDVYLLPK Unmodified 1265.702 0.70197407 2298;1040 Q80SW1;F8WGT1;Q68FL4;F8WI65;H3BKT5 Ahcyl1;Ahcyl2 Putative adenosylhomocysteinase 2;Adenosylhomocysteinase;Putative adenosylhomocysteinase 3 no no 0 0 0 1 10.5 1.8 1 1 1 1 60.454 60.454 3 0.0028577 15741 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 77.64 44.437 598.93 643.4 490.95 415.34 965.86 729.3 563 645 498 418 962 710 3 3 2 2 3 4 85342 22821 2298;1040 21962 53075;53076;53077;53078 61526;61527;61528;61529 61528 4 YKVCNYGLTFTQK Unmodified 1620.797 0.79701344 1141 J3QMG3;Q60931 Vdac3 Voltage-dependent anion-selective channel protein 3 yes no 0 0 0 1 11.5 0.5 1 1 60.51 60.51 3 0.00017415 14536 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.769 45.428 0 0 0 129.91 66.206 0 0 0 0 120 69 0 0 0 0 1 1 0 11412 22822 1141 21963 53079;53080 61530;61531 61531 2 YLAADKDGNVTCER Unmodified 1610.7359 0.73586975 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 1 8.67 3.09 1 1 1 45.072 45.072 3 7.1164E-07 13190 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 109.99 93.306 413.76 247.75 401.05 332.24 474.09 279.22 389 259 400 334 477 269 3 2 3 3 3 2 38220 22823 2131 21964 53081;53082;53083 61532;61533;61534 61532 3 YLAEFATGNDR Unmodified 1255.5833 0.5833155 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 0 7.6 2.8 1 1 2 1 60.413 60.413 2;3 2.4473E-20 20420 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 176.48 113.9 311.22 379.66 465.36 576.38 298.32 457.57 292 376 468 555 301 435 4 5 5 5 4 6 177050 22824 1715 21965 53084;53085;53086;53087;53088 61535;61536;61537;61538;61539;61540;61541 61537 7 YLAEFATGNDR Deamidation (N) 1256.5673 0.56733108 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 1 0 0 5.5 0.5 1 1 64.407 64.407 2 0.014123 22046 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 90.05 48.602 59.428 92.726 132.73 46.422 38.702 49.036 56 93 130 46 37 46 1 2 2 1 1 1 9322.4 22825 1715 21965 53089;53090 61542;61543 61543 669 2 YLAEFATGNDRK Unmodified 1383.6783 0.67827852 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 0 0 1 9.43 2.38 2 1 2 2 54.793 54.793 3;4 8.4867E-27 18293 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 173.04 142.31 2240.4 1930.8 2439.3 1823.2 1759.3 1900.6 2109 1988 2447 1799 1816 1830 6 6 7 5 5 6 309860 22826 1715 21966 53091;53092;53093;53094;53095;53096;53097 61544;61545;61546;61547;61548;61549;61550;61551 61550 8 YLAEFATGNDRK Deamidation (N) 1384.6623 0.6622941 1715 P62259;F6WA09 Ywhae 14-3-3 protein epsilon yes no 0 1 0 1 13 0 1 58.534 58.534 3 0.0028356 20457 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.163 65.684 301.34 246.74 0 255.8 230.32 200.23 282 251 0 238 238 194 1 1 0 1 1 1 25276 22827 1715 21966 53098 61552 61552 669 1 YLAEVAAGDDK Unmodified 1150.5506 0.55061839 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 0 7.25 3.49 1 1 1 1 58.986 58.986 2;3 4.9874E-16 20407 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.88 83.648 511.92 449.68 504.77 149.82 316.4 317.17 482 463 500 149 316 306 5 5 5 2 2 3 78153 22828 1773 21967 53099;53100;53101;53102 61553;61554;61555;61556;61557 61557 5 YLAEVAAGDDKK Unmodified 1278.6456 0.6455814 1773 P63101;A0A2I3BQ03 Ywhaz 14-3-3 protein zeta/delta yes no 0 0 0 1 8.27 2.93 2 2 2 1 1 1 2 54.46 54.46 3;4 2.9985E-08 17952 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.24 77.729 5999.5 5309 6082 5990.3 5499.2 6691.1 5649 5454 6107 5841 5649 6424 16 16 15 16 13 18 999560 22829 1773 21968 53103;53104;53105;53106;53107;53108;53109;53110;53111;53112;53113 61558;61559;61560;61561;61562;61563;61564;61565;61566;61567;61568;61569;61570;61571;61572;61573;61574;61575 61572 18 YLAEVACGDDR Unmodified 1267.5503 0.55030081 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 6.4 3.38 2 1 1 1 53.466 53.466 2;3 7.5101E-26 17681 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 183 145.89 326.81 274.24 308.74 212.67 345.83 337.92 307 278 307 205 343 324 5 4 4 5 4 5 115340 22830 1005 21969 53114;53115;53116;53117;53118 61576;61577;61578;61579;61580;61581;61582 61582 7 YLAEVACGDDRK Unmodified 1395.6453 0.64526383 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 1 5.75 0.829 2 1 1 50.46 50.46 3;4 8.0393E-14 15539 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 133.32 100.39 378.21 384.71 269.24 356.42 592.67 339.05 355 389 270 346 591 328 2 3 3 3 3 3 53862 22831 1005 21970 53119;53120;53121;53122 61583;61584;61585;61586 61585 4 YLAEVASGEK Unmodified 1065.5342 0.53424004 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 0 7.8 2.79 1 1 1 1 1 57.638 57.638 2;3 2.3273E-09 19664 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 158.57 86.952 532.77 265.08 689.89 453.09 686.34 617.88 501 276 672 454 695 598 5 1 5 4 5 5 139380 22832 1797 21971 53123;53124;53125;53126;53127 61587;61588;61589;61590;61591;61592 61592 6 YLAEVASGEKK Unmodified 1193.6292 0.62920306 1797 P68510 Ywhah 14-3-3 protein eta yes yes 0 0 0 1 7 0 1 53.804 53.804 3 0.062858 16219 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 42.789 10.946 107.61 137.44 191.38 0 128.6 214.86 102 139 185 0 130 205 1 1 1 0 1 1 16779 22833 1797 21972 53128 61593 61593 1 YLAEVATGEK Unmodified 1079.5499 0.5498901 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 0 7.88 3.1 2 2 1 1 2 58.843 58.843 2;3 2.6386E-11 20219 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 163.94 96.377 1010.5 749.77 1028.5 1107.3 807.2 1197.5 951 775 1038 1076 832 1144 9 8 8 8 5 8 484370 22834 1706 21973 53129;53130;53131;53132;53133;53134;53135;53136 61594;61595;61596;61597;61598;61599;61600;61601;61602 61601 9 YLAEVATGEKR Unmodified 1235.651 0.65100113 1706 P61982 Ywhag 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed yes yes 0 0 0 1 9.33 2.62 1 1 1 50.278 50.278 3 0.00021015 14911 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 94.791 57.061 599.82 500.82 654.9 670.68 562.09 518.54 565 519 650 659 572 498 4 4 3 4 3 3 59714 22835 1706 21974 53137;53138;53139 61603;61604;61605;61606 61603 4 YLAFTCGLIR Unmodified 1212.6325 0.6325143 315 A0A1W2P6E6;Q9D289 Trappc6b Trafficking protein particle complex subunit 6B yes no 0 0 0 0 6.5 5.5 1 1 75.413 75.413 2 0.00046257 19827 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 96.311 60.125 39.527 38.606 74.824 61.247 51.406 0 37 37 74 61 51 0 1 1 2 2 1 0 12531 22836 315 21975 53140;53141 61607;61608 61608 2 YLAIAPPIIK Unmodified 1097.6849 0.68486744 1955 Q3U1J4 Ddb1 DNA damage-binding protein 1 yes yes 0 0 0 0 9.67 3.99 1 1 2 1 1 77.348 77.348 2;3 0.00013229 20748 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 95.099 67.357 237.64 0 205.6 154.73 168.28 0 222 0 195 148 166 0 4 0 3 3 4 0 74393 22837 1955 21976 53142;53143;53144;53145;53146;53147 61609;61610;61611;61612;61613;61614;61615 61614 7 YLALESMCTLASSEFSHEAVK Unmodified 2372.1028 0.10283345 1401;1400 P17426;P17427 Ap2a1;Ap2a2 AP-2 complex subunit alpha-1;AP-2 complex subunit alpha-2 no no 0 0 0 0 7 0.816 1 1 1 80.763 80.763 3;4 1.7298E-11 29009 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 101.49 86.239 99.313 55.396 97.35 47.104 122.12 66.349 93 56 92 47 121 65 2 2 2 2 3 2 11849 22838 1400;1401 21977 53148;53149;53150 61616;61617;61618;61619 61617 4 YLALLETLSR Unmodified 1177.6707 0.67067394 2876 Q99MR3 Slc12a9 Solute carrier family 12 member 9 yes yes 0 0 0 0 12 0 1 86.032 86.032 2 0.0031661 24090 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 82.749 45.194 0 0 34.624 0 24.058 0 0 0 32 0 23 0 0 0 1 0 1 0 2788 22839 2876 21978 53151 61620 61620 1 YLAPSGPSGTLK Unmodified 1189.6343 0.63428844 2131 Q61553;A0A0G2JDU7 Fscn1 Fascin yes no 0 0 0 0 8.8 0.748 2 2 1 56.213 56.213 2;3 3.6418E-13 16817 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 131.82 83.022 275.9 85.916 420.23 86.758 366.12 364.78 259 93 398 83 362 352 3 2 5 1 4 4 109730 22840 2131 21979 53152;53153;53154;53155;53156 61621;61622;61623;61624;61625 61622 5 YLASGAIDGIINIFDIATGK Unmodified 2051.0939 0.09390697 794 D6RJ72;D6RDC7;Q8BVQ0;Q9ERF3 Wdr61 WD repeat-containing protein 61;WD repeat-containing protein 61, N-terminally processed yes no 0 0 0 0 10 0 1 114.55 114.55 3 3.578E-13 34610 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.09 88.629 8 0 0 0 0 0 8 0 0 0 0 0 1 0 0 0 0 0 1170.4 22841 794 21980 53157 61626 61626 1 YLATASTMDHAR Oxidation (M) 1351.619 0.61904908 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 1 0 7.22 1.31 3 4 1 1 37.262 37.262 3 4.9232E-08 7481 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 111.26 87.652 365.77 330.29 146.68 279.37 345.79 323.91 343 334 148 265 343 310 8 8 3 6 5 7 65935 22842 991;1305 21981 53158;53159;53160;53161;53162;53163;53164;53165;53166 61627;61628;61629;61630;61631;61632;61633;61634;61635;61636;61637 61630 45 11 YLATASTMDHAR Unmodified 1335.6241 0.62413446 991;1305 F6RT34;F6VME3;F7A0B0;F6ZIA4;F6TYB7;F6RWW8;P04370 Mbp Myelin basic protein no no 0 0 0 0 8.38 1.8 1 2 2 1 1 1 42.209 42.209 3 7.4807E-88 9698 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 232.19 206.07 512.61 759.91 728.39 611.69 777.59 826.62 483 755 741 608 792 794 7 8 8 8 7 7 496620 22843 991;1305 21981 53167;53168;53169;53170;53171;53172;53173;53174 61638;61639;61640;61641;61642;61643;61644;61645;61646 61644 9 YLATSQVLLSPK Unmodified 1318.7497 0.74965254 3 A0A075B6A0;A0A075B5P6;P01872 Ighm Ig mu chain C region yes no 0 0 0 0 10 0 1 69.49 69.49 2 0.0048122 20279 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 64.82 24.388 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22844 3 21982 53175 61647 61647 1 YLCTAVLPLLTR Unmodified 1418.7956 0.79555688 902 F6U7V1;E9Q401 Ryr2 Ryanodine receptor 2 yes no 0 0 0 0 12 0 1 83.777 83.777 3 0.022286 23187 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.031 37.503 0 0 28.522 39.834 0 20.254 0 0 28 38 0 19 0 0 1 1 0 1 3119.6 22845 902 21983 53176 61648 61648 1 YLDEDTIYHLQPSGR Unmodified 1805.8584 0.85842773 225 A0A0U1RNT6;A0A0U1RNK6;Q3THS6;A0A0U1RQ95 Mat2a S-adenosylmethionine synthase isoform type-2 yes no 0 0 0 0 6 0 1 61.039 61.039 3 4.4822E-05 20536 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 83.692 64.405 39.471 0 38.574 28.305 0 0 37 0 37 28 0 0 1 0 1 1 0 0 4347.4 22846 225 21984 53177 61649 61649 1 YLDEYNPGIFR Unmodified 1385.6616 0.66156582 570 B0V2P5;Q8BPN8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 8.67 3.09 1 1 1 70.733 70.733 2 0.0027274 26265 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 77.533 49.762 206.64 113.75 160.08 43.178 114.12 49.036 194 120 157 46 111 46 3 2 3 1 1 1 16835 22847 570 21985 53178;53179;53180 61650;61651;61652 61652 3 YLDGLTAER Unmodified 1036.5189 0.51892433 662 CON__P35908v2;CON__P35908 yes no 0 0 0 0 9.5 3.5 1 1 55.955 55.955 2 0.016815 18188 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 67.897 29.659 88.355 52.389 74 55.662 60.404 146.45 83 56 74 56 65 139 1 1 1 1 1 1 6617.4 + 22848 662 21986 53181;53182 61653;61654 61653 2 YLDIHER Unmodified 944.47158 0.4715802 1707 P62073 Timm10 Mitochondrial import inner membrane translocase subunit Tim10 yes yes 0 0 0 0 8 3.56 1 1 1 41.508 41.508 3 0.0032332 12043 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 111.82 57.029 39.238 35.93 229.46 188.29 163.08 85.908 37 37 222 185 167 83 1 1 3 2 2 1 40162 22849 1707 21987 53183;53184;53185 61655;61656;61657 61655 3 YLDLGAYYSAR Unmodified 1290.6245 0.62445203 3151 Q9DCS9 Ndufb10 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 yes yes 0 0 0 0 10 2.16 1 1 1 69.376 69.376 3 0.0005106 23050 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.692 57.391 39.701 29.792 87.838 126.15 46.087 59.696 37 28 83 121 46 56 1 1 1 3 1 2 21393 22850 3151 21988 53186;53187;53188 61658;61659;61660 61658 3 YLDPEYIDR Unmodified 1182.5557 0.55570376 3367 Q9Z0Y1;E9Q919 Dctn3 Dynactin subunit 3 yes no 0 0 0 0 5 0 1 60.769 60.769 2 0.00083233 21104 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 95.502 64.129 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22851 3367 21989 53189 61661 61661 1 YLECSALTQR Unmodified 1239.5918 0.59177169 1759;1675 Q3TLP8;P63001;Q05144;A0A2R8VHH0;P60764;A2AC13 Rac1;Rac2;Rac3 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2;Ras-related C3 botulinum toxin substrate 3 no no 0 0 0 0 7.8 2.79 1 1 1 1 1 52.454 52.454 2;3 3.7972E-09 15029 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 156.62 103.83 295.34 213.09 136.08 188.33 257.11 333.78 277 218 139 181 260 320 5 4 2 3 3 4 60163 22852 1759;1675 21990 53190;53191;53192;53193;53194 61662;61663;61664;61665;61666 61665 5 YLEHGEYEGNLYGTK Unmodified 1771.8053 0.80532952 3241 Q9JLB0 Mpp6 MAGUK p55 subfamily member 6 yes yes 0 0 0 0 5.5 0.5 1 1 53.757 53.757 3 0.00027953 17724 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.568 47.972 29.464 36.264 66.82 26.622 0 0 28 37 65 28 0 0 1 1 1 1 0 0 3660.2 22853 3241 21991 53195;53196 61667;61668 61667 2 YLEHGEYEGNLYGTR Unmodified 1799.8115 0.81147753 3341 Q9WV34 Mpp2 MAGUK p55 subfamily member 2 yes yes 0 0 0 0 4.5 0.5 1 1 49.859 49.859 3 5.5601E-05 16196 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 94.487 73.647 0 38.782 75.108 59.118 46.807 77.548 0 37 74 56 46 74 0 1 2 1 1 2 7498.2 22854 3341 21992 53197;53198 61669;61670 61669 2 YLEHLSGDGK Unmodified 1117.5404 0.54038805 2507 Q8C605;Q9WUA3 Pfkp ATP-dependent 6-phosphofructokinase;ATP-dependent 6-phosphofructokinase, platelet type yes no 0 0 0 0 5.5 0.5 1 1 47.912 47.912 3 0.0040478 15045 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 59.542 24.318 205.9 180.23 226.82 277.26 171.99 242.4 194 186 232 269 176 232 2 2 2 2 1 2 23940 22855 2507 21993 53199;53200 61671;61672 61671 2 YLELGITQR Unmodified 1091.5975 0.597509 1275 O88737;V9GX98 Bsn Protein bassoon yes no 0 0 0 0 8 0 1 62.746 62.746 2 0.014177 19890 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.256 20.666 78.702 119.57 167.82 118.96 175 105.88 74 120 167 121 176 102 1 2 2 2 2 1 5950.1 22856 1275 21994 53201 61673;61674 61674 2 YLETADYAIR Unmodified 1213.5979 0.59790293 1400 P17426 Ap2a1 AP-2 complex subunit alpha-1 yes yes 0 0 0 0 6 0 1 59.771 59.771 2 0.0059814 20025 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 73.985 42.051 48.908 35.306 45.727 37.716 0 0 46 37 46 37 0 0 1 1 1 1 0 0 4979.9 22857 1400 21995 53202 61675 61675 1 YLETLLHSQQQLAK Unmodified 1670.8992 0.89917033 2207 Q9WV80;Q6NZD2 Snx1 Sorting nexin-1 yes no 0 0 0 0 8 0 1 69.032 69.032 3 0.0023515 22887 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.726 27.685 69.247 43.492 46.813 0 65.345 77.019 65 46 46 0 65 74 1 1 1 0 1 1 2936.7 22858 2207 21996 53203 61676 61676 1 YLETPGDENEHAHFQK Unmodified 1913.8544 0.85440498 384 A0A2I3BQZ9;P12023;A0A2I3BPT1;Q3TWF3;A0A2I3BR03 App Amyloid beta A4 protein;N-APP;Soluble APP-alpha;Soluble APP-beta;C99;Beta-amyloid protein 42;Beta-amyloid protein 40;C83;P3(42);P3(40);C80;Gamma-secretase C-terminal fragment 59;Gamma-secretase C-terminal fragment 57;Gamma-secretase C-terminal fragment 50;C31 yes no 0 0 0 0 13 0 1 45.733 45.733 4 0.018554 14263 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 37.092 24.732 128.91 58.693 106.19 0 0 59.696 121 65 102 0 0 56 1 1 1 0 0 1 6193.1 22859 384 21997 53204 61677 61677 1 YLEVQYKPQVHIQMTYPLQGLTR Unmodified 2804.4684 0.46835609 856 Q8R5M8;E9PYN1;E0CY16 Cadm1 Cell adhesion molecule 1 yes no 0 0 0 1 11 0 1 73.506 73.506 4 8.6208E-15 21645 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 79.762 65.109 0 0 0 39.766 35.885 28.824 0 0 0 37 37 28 0 0 0 1 1 1 6614.4 22860 856 21998 53205 61678 61678 1 YLEVVLNTLQQASQAQVDK Unmodified 2146.127 0.12699801 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 0 11 0.816 1 1 1 98.44 98.44 3;4 1.2037E-07 32455 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.654 73.576 0 0 23.574 35.757 9 20.254 0 0 22 34 9 19 0 0 1 2 1 1 17866 22861 1798 21999 53206;53207;53208 61679;61680;61681 61680 3 YLFALQVK Unmodified 980.5695 0.56950333 1030 F8VPU2;E9Q805 Farp1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 0 0 6.5 5.5 1 1 76.448 76.448 2;3 0.0032425 26502 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 81.635 47.557 69.387 0 80.8 0 58.576 20.254 65 0 75 0 56 19 1 0 2 0 1 1 12149 22862 1030 22000 53209;53210 61682;61683 61682 2 YLFLGDYVDR Unmodified 1259.6186 0.61863837 1786;811;374 A0A2I3BPC5;P48455;E0CZ78;P48453;G3X8U7;E9Q6P2;P63328 Ppp3cc;Ppp3cb;Ppp3ca Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform no no 0 0 0 0 9.25 2.28 1 1 1 1 77.534 77.534 2;3 2.6083E-05 29512 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 126.07 86.763 374.07 0 428.82 290.92 230.85 128.01 351 0 408 287 232 121 4 0 4 4 3 2 93753 22863 374;811;1786 22001 53211;53212;53213;53214 61684;61685;61686;61687;61688 61688 5 YLFLSDLPGVK Unmodified 1250.6911 0.69107503 2962 Q9CRA7 Atp5s ATP synthase subunit s, mitochondrial yes yes 0 0 0 0 10.5 0.5 1 1 85.042 85.042 3 0.0012848 26732 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.426 45.618 30.044 0 0 47 29.288 0 28 0 0 47 28 0 1 0 0 1 1 0 9948.8 22864 2962 22002 53215;53216 61689;61690 61690 2 YLFTGLK Unmodified 840.47454 0.47454032 853 E9PYI8;Q9JMA1 Usp14 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 14 yes no 0 0 0 0 6.5 5.5 1 1 70.715 70.715 2 0.014392 17964 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 114.59 37.994 29.632 749.2 826.64 663.81 1022.7 1007 28 719 833 670 1036 972 1 2 2 2 1 2 81635 22865 853 22003 53217;53218 61691;61692 61692 2 YLGHVEVEESR Unmodified 1316.6361 0.63607935 1171 O08919 Numbl Numb-like protein yes yes 0 0 0 0 4 0 1 43.21 43.21 3 0.00014496 13050 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 91.937 66.72 39.464 0 39.835 0 0 20.254 37 0 37 0 0 19 1 0 1 0 0 1 5130.8 22866 1171 22004 53219 61693 61693 1 YLGLHGLDNR Unmodified 1156.5989 0.59890598 2322 Q80VM5;Q5U4C2;E9PWX1;Q9Z218 Dpp6 Dipeptidyl aminopeptidase-like protein 6 yes no 0 0 0 0 10.5 2.5 1 1 50.583 50.583 3 0.0014447 14252 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 70.389 41.877 128.41 158.39 0 250.54 103.08 274.22 120 157 0 231 111 260 1 2 0 2 1 2 30277 22867 2322 22005 53220;53221 61694;61695 61694 2 YLGLLAMSK Unmodified 994.55214 0.55213871 1220 O54774 Ap3d1 AP-3 complex subunit delta-1 yes yes 0 0 0 0 6.5 5.5 1 1 77.535 77.535 2 0.0018822 20678 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 100.02 54.337 29.759 56.513 0 0 37.054 47.979 28 55 0 0 37 46 1 1 0 0 1 1 4455.8 22868 1220 22006 53222;53223 61696;61697 61697 2 YLGLYNDPNSNPK Unmodified 1493.7151 0.71505795 2396 Q8BH59;V9GXX9 Slc25a12 Calcium-binding mitochondrial carrier protein Aralar1 yes no 0 0 0 0 8.33 0.471 2 1 61.038 61.038 2;3 1.047E-18 19085 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 150.09 120.62 167.72 267.95 161.52 101.65 0 256.91 158 265 158 93 0 241 2 3 1 1 0 3 30951 22869 2396 22007 53224;53225;53226 61698;61699;61700 61699 3 YLGPAVLMQAYR Unmodified 1380.7224 0.72239194 2918 Q9CQA3 Sdhb Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial yes yes 0 0 0 0 8 4.97 1 1 1 75.183 75.183 2 1.9852E-26 19777 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 171.73 140.5 154.07 181.22 228.12 66.286 89.678 226.63 145 180 221 64 90 215 2 3 4 2 2 4 55304 22870 2918 22008 53227;53228;53229 61701;61702;61703;61704;61705 61704 5 YLGQGLQYGSFTDLR Unmodified 1716.8471 0.84713476 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8 0 1 74.186 74.186 3 8.1496E-06 25229 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.337 52.002 0 0 49.772 0 56.251 67.685 0 0 46 0 56 65 0 0 1 0 1 1 8565 22871 1275 22009 53230 61706 61706 1 YLGTQPEPDIVGLDSGHIR Unmodified 2066.0433 0.043268383 1608 P52196 Tst Thiosulfate sulfurtransferase yes yes 0 0 0 0 5 0 1 64.912 64.912 3 5.5584E-06 23027 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.928 51.529 20.215 0 28.931 28.353 27.986 0 19 0 28 28 28 0 1 0 1 1 1 0 7242.7 22872 1608 22010 53231 61707 61707 1 YLGYLEQLLR Unmodified 1266.6972 0.69722304 653 CON__P02662 yes yes 0 0 0 0 11 0 1 91.324 91.324 2 0.00093671 29270 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.598 58.302 0 56.392 0 43.72 0 0 0 53 0 40 0 0 0 1 0 1 0 0 9010.7 + 22873 653 22011 53232 61708 61708 1 YLHEVLRPVISR Unmodified 1480.8514 0.85143227 3391 Q9Z268 Rasal1 RasGAP-activating-like protein 1 yes yes 0 0 0 1 10.5 0.5 1 1 52.219 52.219 4 2.35E-05 12345 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 95.094 62.253 0 69.16 0 61.208 36.688 58.649 0 65 0 56 37 56 0 1 0 1 1 1 34103 22874 3391 22012 53233;53234 61709;61710 61710 2 YLIANATNPESK Deamidation (N) 1320.6561 0.65614609 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 1 0 0 6 0 1 59.643 59.643 3 0.0015142 19886 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 66.262 35.035 49.225 26.473 0 61.208 0 69.29 46 28 0 56 0 65 1 1 0 1 0 1 5851.8 22875 1005 22013 53235 61711 61711 267 1 YLIANATNPESK Unmodified 1319.6721 0.67213051 1005 F6VW30;P68254;F6YY69 Ywhaq 14-3-3 protein theta yes no 0 0 0 0 9 1.73 1 3 2 1 1 57.33 57.33 2;3;4 9.0778E-49 17338 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 199.68 129.85 395.72 263.69 356.61 445.11 300.17 378.87 371 268 361 426 306 362 6 4 6 6 5 6 140300 22876 1005 22013 53236;53237;53238;53239;53240;53241;53242;53243 61712;61713;61714;61715;61716;61717;61718;61719;61720 61713 9 YLIATSEQPIAALHR Unmodified 1681.9152 0.91515474 1460 Q8C483;P26638;A2AFS0;A2AFS1 Sars Serine--tRNA ligase, cytoplasmic yes no 0 0 0 0 9 0.816 1 1 1 62.429 62.429 3 2.0401E-22 19735 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 135.94 115.81 136.98 116.04 143.5 97.461 80.022 166.14 129 120 139 93 83 158 3 3 2 2 2 3 22670 22877 1460 22014 53244;53245;53246 61721;61722;61723 61721 3 YLIEIAK Unmodified 848.50076 0.50075507 2982 Q9CX00 Ist1 IST1 homolog yes yes 0 0 0 0 9 0 1 68.475 68.475 2 0.027409 21866 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 94.262 12.478 0 69.16 0 131.16 0 0 0 65 0 120 0 0 0 1 0 1 0 0 9511.1 22878 2982 22015 53247 61724 61724 1 YLIGEQTEK Unmodified 1079.5499 0.5498901 2451 Q8BRR9;Q61481 Pde1a Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A yes no 0 0 0 0 6 0 1 54.738 54.738 2 0.0011768 17612 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 87.639 33.231 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22879 2451 22016 53248 61725 61725 1 YLILNATQAESK Deamidation (N) 1350.7031 0.70309628 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 1 0 0 8.67 0.943 2 1 68.01 68.01 2;3 0.0022853 22642 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 90.653 47.141 119.01 92.187 133.17 56.07 170.79 38.375 112 93 130 56 167 37 3 2 3 1 3 1 19844 22880 2944 22017 53249;53250;53251 61726;61727;61728;61729 61727 1031 4 YLILNATQAESK Unmodified 1349.7191 0.7190807 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 11.3 1.49 1 1 1 1 2 65.536 65.536 2;3 2.8275E-27 17922 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 178.67 110.94 932.35 460.36 299.27 849.7 1041.8 899.43 875 465 298 810 1057 867 7 5 3 6 5 5 395710 22881 2944 22017 53252;53253;53254;53255;53256;53257 61730;61731;61732;61733;61734;61735;61736;61737;61738 61734 9 YLIPNIK Unmodified 859.51674 0.51673948 570 B0V2P5;Q8BPN8;F6RYL8;B0V2P6 Dmxl2 DmX-like protein 2 yes no 0 0 0 0 10.5 0.5 1 1 67.572 67.572 2;3 0.011441 19379 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.335 22.647 321.61 0 49.324 260.19 304.12 360.16 300 0 46 242 314 346 2 0 1 1 2 2 31959 22882 570 22018 53258;53259 61739;61740 61739 2 YLKGDHAGVLK Unmodified 1199.6663 0.66625727 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 1 11 2 1 1 47.176 47.176 4 0.0012052 12489 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.451 35.072 137.57 144.87 612.54 393.69 430.5 186.98 130 148 591 401 435 180 1 1 2 2 2 1 20165 22883 2131 22019 53260;53261 61741;61742 61741 2 YLLEQDFPGMR Unmodified 1367.6544 0.65437195 3271 Q9QXY6 Ehd3 EH domain-containing protein 3 no no 0 0 0 0 13 0 1 73.434 73.434 2 0.060485 27689 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 48.998 21.377 48.747 55.364 55.809 27.278 0 59.696 46 56 56 28 0 56 1 1 1 1 0 1 5838.4 22884 3271 22020 53262 61743 61743 1 YLLGTSLAR Unmodified 992.56548 0.56548059 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 11.5 0.5 1 1 60.963 60.963 2 0.00030694 15950 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 128.61 92.727 348.74 387.83 0 382.78 336.47 190.63 326 383 0 356 335 185 2 2 0 3 2 1 65825 22885 1393 22021 53263;53264 61744;61745;61746 61744 3 YLLGTSLARPCIAR Unmodified 1589.8712 0.87118144 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 1 1 0 1 60.508 60.508 3 0.051403 19801 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 41.317 20.08 29.754 57.578 0 30.092 27.237 19.477 28 56 0 28 28 19 1 1 0 1 1 1 10708 22886 1393 22022 53265 61747 61747 1 YLLLAGAPR Unmodified 972.57565 0.57565135 2163 Q62470 Itga3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain yes yes 0 0 0 0 1 0 1 65.196 65.196 2 0.035679 22070 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 58.981 2.6028 60.088 0 0 50.278 0 59.696 56 0 0 46 0 56 1 0 0 1 0 1 303770 22887 2163 22023 53266 61748 61748 1 YLLLLAAGDPR Unmodified 1200.6867 0.68665836 492 A2ALV7;Q6PDI5;A2ALV8;A2ALV6 AI314180;Ecm29 Proteasome-associated protein ECM29 homolog yes no 0 0 0 0 12 0 1 80.532 80.532 2 0.0029077 21976 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 75.854 49.252 0 0 0 30.604 0 29.848 0 0 0 28 0 28 0 0 0 1 0 1 1979.7 22888 492 22024 53267 61749 61749 1 YLLLNPK Unmodified 859.51674 0.51673948 2538 Q8CGF7 Tcerg1 Transcription elongation regulator 1 yes yes 0 0 0 0 1 0 1 66.77 66.77 3 0.049435 22448 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 49.347 0 20.099 37.739 16.386 40.557 0 0 19 37 19 38 0 0 1 1 1 1 0 0 2085.9 22889 2538 22025 53268 61750 61750 1 YLLPAILNPR Unmodified 1168.6968 0.69682911 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 3.75 4.76 3 1 79.185 79.185 2;3 6.8171E-06 21172 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 132.29 96.405 90.451 109.17 134.3 58.403 56.928 123.83 85 110 133 56 56 120 2 4 5 2 2 3 36983 22890 2841 22026 53269;53270;53271;53272 61751;61752;61753;61754;61755;61756 61755 6 YLLQEQLK Unmodified 1033.5808 0.5807963 2539 Q8CGK3 Lonp1 Lon protease homolog, mitochondrial yes yes 0 0 0 0 9 0 1 63.654 63.654 3 0.0051902 19632 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.109 27.261 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22891 2539 22027 53273 61757 61757 1 YLLQYQEPIPCEQLVTALCDIK Unmodified 2693.3445 0.34446071 3310 Q9R1P0;E9PW69;E9Q0X0 Psma4 Proteasome subunit alpha type-4;Proteasome subunit alpha type yes no 0 0 0 0 7 0 2 95.664 95.664 3;4 4.2618E-05 35276 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 51.31 37.579 33.985 32.291 31.69 37.533 18.345 19.731 32 33 32 38 19 19 1 1 1 2 1 1 5444.1 22892 3310 22028 53274;53275 61758;61759 61759 2 YLLSQSSPAPLTAAEEELR Unmodified 2074.0582 0.058249746 2776 Q91YR1 Twf1 Twinfilin-1 yes yes 0 0 0 0 8 0 1 77.141 77.141 3 5.6771E-06 26758 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.866 49.502 29.904 27.776 0 0 0 39.442 28 28 0 0 0 37 1 1 0 0 0 1 2955.3 22893 2776 22029 53276 61760 61760 1 YLMEEDEDAYKK Unmodified 1532.6705 0.67047553 1573 P47962 Rpl5 60S ribosomal protein L5 yes yes 0 0 0 1 5 0 1 57.083 57.083 3 0.00057399 19318 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 71.555 49.998 60.088 0 0 39.043 74.329 37.321 56 0 0 37 74 37 1 0 0 1 1 1 3784.1 22894 1573 22030 53277 61761 61761 1 YLMSGVVAPVK Unmodified 1162.642 0.64201635 2189 Q69ZF3 Gba2 Non-lysosomal glucosylceramidase yes yes 0 0 0 0 11 0 1 68.61 68.61 3 0.0019649 19431 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.434 37.005 0 38.738 37.71 0 0 0 0 37 37 0 0 0 0 1 1 0 0 0 3383.5 22895 2189 22031 53278 61762 61762 1 YLMVPALQGALTMK Unmodified 1534.8251 0.82514245 2121 Q61249 Igbp1 Immunoglobulin-binding protein 1 yes yes 0 0 0 0 1 0 1 87.966 87.966 3 0.029349 31349 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 37.954 13.967 20.387 0 0 20.411 18.936 0 19 0 0 19 19 0 1 0 0 1 1 0 927.82 22896 2121 22032 53279 61763 61763 1 YLNDEELITQQLNDLEK Unmodified 2077.0215 0.021529888 573 B1AQX9;B1AQX6;B1AQX7;Q9QWI6 Srcin1 SRC kinase signaling inhibitor 1 yes no 0 0 0 0 7 4.24 2 1 84.978 84.978 3;4 8.0287E-06 32305 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.335 44.745 0 39.368 0 20.767 37.714 58.62 0 37 0 19 37 56 0 2 0 1 1 3 10676 22897 573 22033 53280;53281;53282 61764;61765;61766 61764 3 YLNQDYETLR Unmodified 1313.6252 0.62518031 1155 O08529 Capn2 Calpain-2 catalytic subunit yes yes 0 0 0 0 5 0 2 55.513 55.513 2;3 0.0078694 18594 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 69.65 27.671 58.158 153.54 64.4 0 0 89.544 55 149 65 0 0 84 1 2 1 0 0 2 6003.6 22898 1155 22034 53283;53284 61767;61768 61767 2 YLNTQYIK Unmodified 1041.5495 0.54949617 3064 Q9D4H8 Cul2 Cullin-2 yes yes 0 0 0 0 9 0 1 58.299 58.299 3 0.055415 17044 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 42.109 16.17 59.279 63.794 81.856 85.84 0 88.478 56 65 83 83 0 83 1 1 1 1 0 1 5211.1 22899 3064 22035 53285 61769 61769 1 YLNWIGVPTK Unmodified 1189.6495 0.64954457 30 B2Z891;A0A0A6YW89;A7UAK5;Q3U3S6;A7UAK8;A2AUP4;A0A087WRG0;Q7TS91;A2AUP1;Q6GTL7;A2AUP5;A2AUP3;A0A0A6YY64;B2Z892;B2Z893;A7UAK4;B2Z894;A0A087WRM7;P70265 Pfkfb2;Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase yes no 0 0 0 0 11.5 0.5 1 1 77.676 77.676 3 0.0015841 23468 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.349 41.18 39.701 0 0 66.725 46.751 0 37 0 0 65 46 0 1 0 0 2 1 0 8713.3 22900 30 22036 53286;53287 61770;61771 61770 2 YLPALGYSK Unmodified 1010.5437 0.54368251 432 Q91WQ3;A2A7S7 Yars Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed;Tyrosine--tRNA ligase yes no 0 0 0 0 10 0 1 66.41 66.41 3 0.022405 18752 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.423 25.506 39.186 35.786 56.187 46.241 36.578 0 37 37 56 46 37 0 1 1 1 1 1 0 6728.7 22901 432 22037 53288 61772 61772 1 YLPDTLLLEECGLLR Unmodified 1803.9441 0.94407161 1272 O88587 Comt Catechol O-methyltransferase yes yes 0 0 0 0 7 0 1 89.787 89.787 3 0.047227 33146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 32.702 20.342 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1686.8 22902 1272 22038 53289 61773 61773 1 YLPEDFMESLKEDR Unmodified 1770.8135 0.81345137 3261 Q9QVP9;E9Q2A6;Q3UDE9 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 6 0 1 78.039 78.039 3 0.001927 28489 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 64.798 39.477 108.2 89.431 133.08 37.454 90.207 125.35 102 93 130 37 92 120 2 2 2 1 2 2 4813.4 22903 3261 22039 53290 61774;61775 61774 2 YLPEEVAHSDISETSSR Unmodified 1918.8909 0.89085007 1519 P35436 Grin2a Glutamate receptor ionotropic, NMDA 2A yes yes 0 0 0 0 4 0 1 52.867 52.867 3 0.0036494 17655 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 44.662 34.028 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22904 1519 22040 53291 61776 61776 1 YLPENDLKR Unmodified 1146.6033 0.60332266 134 A0A0N4SVL9;Q9CQR6;A0A0N4SVE2 Ppp6c Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed yes no 0 0 0 1 7 0 1 48.608 48.608 3 0.0038336 13796 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.516 47.78 0 39.368 0 70.06 52.37 86.984 0 37 0 65 56 83 0 1 0 1 1 1 3570.4 22905 134 22041 53292 61777 61777 1 YLPGLAK Unmodified 760.44833 0.44832557 36 A0A0A0MQ68;Q60759 Gcdh Glutaryl-CoA dehydrogenase, mitochondrial yes no 0 0 0 0 10 0 1 61.393 61.393 2 0.056455 16668 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 74.832 28.168 128.16 119.04 0 0 145.16 158.96 120 120 0 0 144 153 1 1 0 0 1 1 13028 22906 36 22042 53293 61778 61778 1 YLPGPLQDMFK Unmodified 1307.6584 0.6583947 1835;1767 P63040;P84086 Cplx1;Cplx2 Complexin-1;Complexin-2 no no 0 0 0 0 10.6 1.62 1 2 2 2 1 2 84.956 84.956 2;3 9.9564E-14 33142 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 154.85 88.498 168.74 233.35 420.14 349.2 448.05 429.2 158 232 408 347 452 408 4 4 5 5 7 6 355990 22907 1767;1835 22043 53294;53295;53296;53297;53298;53299;53300;53301;53302;53303 61779;61780;61781;61782;61783;61784;61785;61786;61787;61788;61789 61789 11 YLPGPLQDMFKK Unmodified 1435.7534 0.75335771 1835;1767 P63040;P84086 Cplx1;Cplx2 Complexin-1;Complexin-2 no no 0 0 0 1 11 0 1 76.529 76.529 3 0.0016632 22859 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 63.727 19.418 119.1 0 0 142.09 0 118.33 111 0 0 130 0 111 1 0 0 1 0 1 24371 22908 1767;1835 22044 53304 61790 61790 1 YLPHSAGR Unmodified 899.46135 0.46134987 723 D3YYM6;D3Z1S8;Q91V55;P97461 Rps5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed yes no 0 0 0 0 7 0 1 31.698 31.698 3 0.0055794 6065 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 73.248 26.878 59.623 0 78.229 34.53 66.404 0 56 0 74 37 65 0 1 0 1 1 1 0 5206.2 22909 723 22045 53305 61791 61791 1 YLPPATQVVLISATLPHEILEMTNK Unmodified 2777.5037 0.50373854 135 A0A0N4SVP8;Q91VC3;A2AFK7 Eif4a3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed yes no 0 0 0 0 10 0 1 100.59 100.59 4 5.5459E-17 32670 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 77.543 70.668 0 0 21 0 0 0 0 0 21 0 0 0 0 0 1 0 0 0 1898.9 22910 135 22046 53306 61792 61792 1 YLQEEVNINR Unmodified 1276.6412 0.64116473 431 A2A6U3;Q80UG5;A2A6U5 Sept9 Septin-9 yes no 0 0 0 0 13 0 1 52.967 52.967 2 0.0084186 17803 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 68.847 20.423 88.131 61.481 103.86 53.234 94.833 0 83 65 102 56 93 0 1 1 1 1 1 0 6479.6 22911 431 22047 53307 61793 61793 1 YLQEFAPLGTGGGLYHFR Unmodified 2025.0108 0.010846043 2807 Q922H4;D3Z2L8;D3YVK2;D3Z5Z5;D3Z0T7;A0A087WPV7;D3Z2T0 Gmppa Mannose-1-phosphate guanyltransferase alpha yes no 0 0 0 0 9 0 1 75.838 75.838 3 0.012496 25366 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.999 22.606 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22912 2807 22048 53308 61794 61794 1 YLQEVINVLETDGHFR Unmodified 1931.9741 0.97412619 267 A0A1C7CYU3;Q02819;A0A1B0GT83;A0A1B0GR92 Nucb1 Nucleobindin-1 yes no 0 0 0 0 7 0 1 91.324 91.324 3 3.308E-06 33817 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.837 48.875 0 20.216 0 0 19.874 0 0 19 0 0 19 0 0 1 0 0 1 0 1253.7 22913 267 22049 53309 61795 61795 1 YLRPPNTSLFVR Unmodified 1461.8092 0.80923311 1919 Q3TFP0;Q9R0U0 Srsf10 Serine/arginine-rich splicing factor 10 yes no 0 0 0 1 12 0 1 59.393 59.393 3 0.0084248 13859 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 54.199 32.001 48.243 63.676 133.46 70.308 139.26 84.504 46 65 130 74 139 83 1 1 1 1 1 1 11937 22914 1919 22050 53310 61796 61796 1 YLSAALK Unmodified 764.44324 0.44324019 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 0 10.5 0.5 1 1 57.727 57.727 2 0.019793 14583 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 107.43 33.014 99.11 0 220.33 216.26 239.53 76.345 93 0 213 214 241 74 1 0 2 2 2 1 51255 22915 607 22051 53311;53312 61797;61798 61798 2 YLSAALKK Unmodified 892.5382 0.53820321 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 1 12 0 1 53.656 53.656 3 0.028448 11589 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 65.156 34.594 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22916 607 22052 53313 61799 61799 1 YLSEVASGENK Unmodified 1195.5721 0.57208211 2944 Q9CQV8;A2A5N1 Ywhab 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed yes no 0 0 0 0 7.8 2.79 1 1 1 1 1 53.686 53.686 2;3 2.704E-53 17805 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 208.75 156.27 819.54 556.21 830.07 584.84 1064.3 846.35 771 564 822 590 1071 819 7 5 6 5 7 6 232770 22917 2944 22053 53314;53315;53316;53317;53318 61800;61801;61802;61803;61804;61805;61806 61806 7 YLSGEENGVVSPEK Deamidation (N) 1507.7042 0.70421849 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 1 0 0 4.5 0.5 1 1 57.314 57.314 3 8.7649E-05 19436 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.004 57.753 78.683 0 120.79 0 114.46 47.979 74 0 112 0 111 46 2 0 2 0 2 1 7188.3 22918 3373 22054 53319;53320 61807;61808 61808 1137 2 YLSGIAHFLEK Unmodified 1276.6816 0.68157298 3137 Q9DC61;A2AIW9 Pmpca Mitochondrial-processing peptidase subunit alpha yes no 0 0 0 0 10 0 1 75.333 75.333 3 0.0060514 22765 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.391 31.018 59.435 24.294 89.131 0 38.702 0 56 28 84 0 37 0 1 1 1 0 1 0 3693.5 22919 3137 22055 53321 61809 61809 1 YLSLHDNK Unmodified 988.49779 0.49779495 22 A0A087WQ38;Q8BFQ4 Wdr82 WD repeat-containing protein 82 yes no 0 0 0 0 8 0 1 45.395 45.395 3 0.0058323 11757 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 72.485 48.928 0 0 75.819 95.383 92.896 0 0 0 74 93 93 0 0 0 1 1 1 0 3517.5 22920 22 22056 53322 61810 61810 1 YLTAEAFGFK Unmodified 1145.5757 0.57571092 2131 Q61553;A0A0G2JDU7 Fscn1 Fascin yes no 0 0 0 0 10.6 2.06 1 1 1 2 76.265 76.265 2;3 3.4746E-07 28929 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 138.4 82.865 493.6 235.45 388.27 306 473.04 308.67 463 242 379 297 472 296 5 4 5 5 6 4 84118 22921 2131 22057 53323;53324;53325;53326;53327 61811;61812;61813;61814;61815;61816;61817 61815 7 YLTAEETDK Unmodified 1068.4975 0.49752018 631 Q91W39;B7ZC24;B7ZC23 Ncoa5 Nuclear receptor coactivator 5 yes no 0 0 0 0 5 0 1 49.878 49.878 2 0.018635 15962 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.27 36.461 0 0 29.472 18.488 27.77 19.462 0 0 28 19 28 19 0 0 1 1 1 1 1619.7 22922 631 22058 53328 61818 61818 1 YLTGTYVQEESPEGGR Unmodified 1784.8217 0.82170787 1034;29 F8VQE9;Q8VHH5;A0A1D5RMG4;A0A0G2JDW1;Q8BXK8;A0A087WRF2 Agap3;Agap1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3;Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 no no 0 0 0 0 6 0 1 55.168 55.168 3 0.0054159 17820 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 42.913 28.655 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22923 1034;29 22059 53329 61819 61819 1 YLTLDSFDAMFR Unmodified 1477.6912 0.69115139 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 9 0 1 91.655 91.655 2 0.002034 32506 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 67.704 51.823 49.358 0 0 30.604 0 0 46 0 0 28 0 0 1 0 0 1 0 0 2554.8 22924 2282 22060 53330 61820 61820 1 YLTLLSAR Unmodified 935.54402 0.54401687 312 A0A1L1SVG6;Q8BY89 Slc44a2 Choline transporter-like protein 2 yes no 0 0 0 0 1 0 1 67.363 67.363 2 0.028442 22731 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.248 52.549 48.965 35.465 35.953 38.298 0 0 46 37 37 37 0 0 1 1 1 1 0 0 4113.3 22925 312 22061 53331 61821 61821 1 YLTTAVITNK Unmodified 1122.6285 0.62847478 1667 P60229 Eif3e Eukaryotic translation initiation factor 3 subunit E yes yes 0 0 0 0 10.5 0.5 1 1 62.585 62.585 2 4.4887E-05 17168 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 116.52 83.677 0 28.989 48.033 0 0 39.442 0 28 46 0 0 37 0 1 1 0 0 1 4397.5 22926 1667 22062 53332;53333 61822;61823 61822 2 YLTVAAIFR Unmodified 1052.6019 0.6018661 2283;2975 Q7TMM9;Q9CWF2 Tubb2a;Tubb2b Tubulin beta-2A chain;Tubulin beta-2B chain no no 0 0 0 0 6.23 5.51 30 26 1 107.19 107.19 2 5.7375E-06 28699 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 155.88 92.729 6934.7 5629.8 5446.4 5996.9 4106.1 5970.3 6514 5786 5453 5789 4171 5698 56 61 53 58 46 57 1619200 22927 2283;2975 22063 53334;53335;53336;53337;53338;53339;53340;53341;53342;53343;53344;53345;53346;53347;53348;53349;53350;53351;53352;53353;53354;53355;53356;53357;53358;53359;53360;53361;53362;53363;53364;53365;53366;53367;53368;53369;53370;53371;53372;53373;53374;53375;53376;53377;53378;53379;53380;53381;53382;53383;53384;53385;53386;53387;53388;53389;53390 61824;61825;61826;61827;61828;61829;61830;61831;61832;61833;61834;61835;61836;61837;61838;61839;61840;61841;61842;61843;61844;61845;61846;61847;61848;61849;61850;61851;61852;61853;61854;61855;61856;61857;61858;61859;61860;61861;61862;61863;61864;61865;61866;61867;61868;61869;61870;61871;61872;61873;61874;61875;61876;61877;61878;61879;61880;61881;61882;61883;61884;61885;61886;61887;61888;61889;61890;61891;61892;61893;61894;61895;61896;61897;61898;61899;61900;61901;61902;61903;61904;61905;61906;61907;61908;61909;61910;61911;61912;61913;61914;61915;61916;61917;61918;61919;61920;61921;61922;61923;61924;61925;61926;61927;61928;61929;61930;61931;61932;61933;61934;61935;61936;61937;61938;61939;61940 61831 117 YLTVAAVFR Unmodified 1038.5862 0.58621603 1795;1863;3072 P99024;P68372;Q9D6F9 Tubb5;Tubb4b;Tubb4a Tubulin beta-5 chain;Tubulin beta-4B chain;Tubulin beta-4A chain no no 0 0 0 0 10.7 3.39 6 6 43 1 96.609 96.609 2;3 2.3285E-45 25440 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 209.37 144.62 5145.2 3159.9 5317.9 5764.7 4767.5 5363.3 4830 3211 5268 5602 4819 5129 51 50 47 56 41 52 2926600 22928 1863;1795;3072 22064 53391;53392;53393;53394;53395;53396;53397;53398;53399;53400;53401;53402;53403;53404;53405;53406;53407;53408;53409;53410;53411;53412;53413;53414;53415;53416;53417;53418;53419;53420;53421;53422;53423;53424;53425;53426;53427;53428;53429;53430;53431;53432;53433;53434;53435;53436;53437;53438;53439;53440;53441;53442;53443;53444;53445;53446 61941;61942;61943;61944;61945;61946;61947;61948;61949;61950;61951;61952;61953;61954;61955;61956;61957;61958;61959;61960;61961;61962;61963;61964;61965;61966;61967;61968;61969;61970;61971;61972;61973;61974;61975;61976;61977;61978;61979;61980;61981;61982;61983;61984;61985;61986;61987;61988;61989;61990;61991;61992;61993;61994;61995;61996;61997;61998;61999;62000;62001;62002;62003;62004;62005;62006;62007;62008;62009;62010;62011;62012;62013;62014;62015;62016;62017;62018;62019;62020;62021;62022;62023;62024;62025;62026;62027;62028;62029;62030;62031;62032;62033;62034;62035;62036;62037;62038;62039;62040;62041;62042;62043;62044;62045;62046;62047;62048;62049;62050;62051 61945 111 YLTVATVFR Unmodified 1068.5968 0.59678072 3183;2805 Q922F4;Q9ERD7 Tubb6;Tubb3 Tubulin beta-6 chain;Tubulin beta-3 chain no no 0 0 0 0 9.4 4.32 1 1 1 1 1 70.903 70.903 2 1.9004E-72 18045 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 228.45 159.22 2839.9 1921.6 2966.2 3283.8 3287.9 2561.1 2667 1994 2905 3187 3307 2455 11 9 10 10 6 10 1816400 22929 2805;3183 22065 53447;53448;53449;53450;53451 62052;62053;62054;62055;62056;62057;62058;62059;62060;62061;62062;62063;62064;62065 62061 14 YLVLDEADR Unmodified 1092.5451 0.54513908 2146 Q62167;P16381;Q62095;Q3V086;Q61496 Ddx3x;D1Pas1;Ddx3y;Ddx4 ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 yes no 0 0 0 0 5 0 1 60.534 60.534 2 0.018603 21043 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.299 34.538 0 58.531 63.003 85.645 70.134 97.137 0 56 65 83 74 93 0 1 1 1 1 1 8806 22930 2146 22066 53452 62066 62066 1 YLVPSDITVAQFMWIIR Unmodified 2051.0914 0.09140455 1671 P60521 Gabarapl2 Gamma-aminobutyric acid receptor-associated protein-like 2 yes yes 0 0 0 0 11.5 0.5 1 1 105.31 105.31 3 3.1406E-06 29260 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 74.296 57.044 0 0 3.1133 2.978 6.1392 0 0 0 3 3 6 0 0 0 1 1 1 0 2459.6 22931 1671 22067 53453;53454 62067;62068 62068 2 YLVPSDLTVGQFYFLIR Unmodified 2030.0877 0.08769938 2661 Q8R3R8;Q9DCD6 Gabarapl1;Gabarap Gamma-aminobutyric acid receptor-associated protein-like 1;Gamma-aminobutyric acid receptor-associated protein yes no 0 0 0 0 10.5 0.5 1 1 99.68 99.68 3 0.00055206 32895 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.147 30.562 0 9.576 28 9.3067 28.193 19.45 0 9 28 9 28 19 0 1 1 1 1 1 6660.9 22932 2661 22068 53455;53456 62069;62070 62070 2 YLVQDGAQVEAK Unmodified 1319.6721 0.67213051 3450 S4R2K9;G5E8K5;S4R2S8;G5E8K3;G5E8K2;S4R1S2;A0A1W2P812 Ank3 Ankyrin-3 yes no 0 0 0 0 5.5 0.5 1 1 55.425 55.425 3 0.0063665 18610 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 50.145 26.909 39.35 26.527 36.578 37.388 46.399 0 37 28 37 37 46 0 1 1 1 1 1 0 2162.1 22933 3450 22069 53457;53458 62071;62072 62071 2 YLVVLNFR Unmodified 1022.5913 0.59130141 1348 P10852;A0A0U1RPK4 Slc3a2 4F2 cell-surface antigen heavy chain yes no 0 0 0 0 8.67 5.44 1 1 1 76.513 76.513 2 0.0090636 20416 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 101.21 61.669 176.9 100.52 190.26 67.058 95.321 126.27 166 102 185 65 93 121 2 2 3 1 1 2 17104 22934 1348 22070 53459;53460;53461 62073;62074;62075 62074 3 YLVVNADEGEPGTCK Unmodified 1650.7559 0.75593649 680 D3YUM1;Q91YT0;D3Z1U9;D3Z0K1;D3YXX5 Ndufv1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial yes no 0 0 0 0 5.5 0.5 1 1 59.58 59.58 3 3.4191E-05 19834 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.98 52.657 87.829 100.58 158.47 110.51 72.692 46.962 83 102 157 111 74 46 1 1 2 2 1 1 19394 22935 680 22071 53462;53463 62076;62077 62077 2 YLWDASVEPDPEKIPSFPPDLGFPER Unmodified 3000.4545 0.45453974 2956 Q9CR61 Ndufb7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 yes yes 0 0 0 1 7 0 1 90.33 90.33 4 0.046473 33483 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 28.665 16.7 14.968 0 9.0159 14.515 13.295 19.875 14 0 9 14 14 19 1 0 1 1 1 1 727.56 22936 2956 22072 53464 62078 62078 1 YLWNNIK Unmodified 949.50215 0.50215205 143 A0A0R4IZW8;O88456;A0A0R4J1C2;Q9D7J7 Capns1;Capns2 Calpain small subunit 1;Calpain small subunit 2 yes no 0 0 0 0 10.5 0.5 1 1 66.419 66.419 2;3 0.014542 18213 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.021 19.539 0 77.06 100.24 123.37 96.727 125.16 0 74 102 120 102 120 0 1 1 1 1 1 6795.4 22937 143 22073 53465;53466 62079;62080 62080 2 YLYELLYNDPIK Unmodified 1542.797 0.79699667 3340 Q9WV18 Gabbr1 Gamma-aminobutyric acid type B receptor subunit 1 yes yes 0 0 0 0 9 0 1 89.815 89.815 3 0.00020177 31689 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 75.045 46.748 0 0 0 0 0 37 0 0 0 0 0 37 0 0 0 0 0 1 4003.7 22938 3340 22074 53467 62081 62081 1 YLYGSDQLVVR Unmodified 1311.6823 0.68230126 1090 G3X9Y1 Syt3 yes yes 0 0 0 0 8 0 1 62.894 62.894 2 0.049048 19868 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 50.292 25.949 0 29.792 0 0 46.807 38.106 0 28 0 0 46 37 0 1 0 0 1 1 1864.4 22939 1090 22075 53468 62082 62082 1 YLYGTGAVAGVYLPGSR Unmodified 1742.8992 0.89917033 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 10 0 1 73.855 73.855 2 0.0052173 22297 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 49.149 35.722 59.958 25.749 0 29.94 35.311 58.688 56 28 0 28 37 56 1 1 0 1 1 1 2696.2 22940 3266 22076 53469 62083 62083 1 YLYHVLTK Unmodified 1035.5753 0.57531699 1131 H7BXB6;Z4YLG3;Q80U30 Clec16a Protein CLEC16A yes no 0 0 0 0 12 0 1 57.96 57.96 3 0.04942 13326 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 43.246 23.634 118 89.165 109.48 104.96 0 0 111 93 111 102 0 0 1 1 1 1 0 0 6376.2 22941 1131 22077 53470 62084 62084 1 YLYTLVITDKEK Unmodified 1484.8126 0.81264673 3218 Q9JJI8 Rpl38 60S ribosomal protein L38 yes yes 0 0 0 1 10.3 0.471 2 1 72.105 72.105 3;4 0.00057865 21527 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 78.324 64.645 127.82 329.92 370.92 201.59 439.87 201.6 121 324 370 204 436 195 2 4 4 3 4 2 33724 22942 3218 22078 53471;53472;53473 62085;62086;62087;62088 62085 4 YMACCLLYR Unmodified 1248.5454 0.54535555 1313;1794;44;2013 A0A0A0MQA5;P68368;P05213;P68369;Q3UX10 Tuba4a;Tuba1b;Tuba1a;Tubal3 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha chain-like 3 no no 0 0 0 0 9.5 3.14 1 1 1 3 2 1 1 63.07 63.07 2;3 2.3072E-18 19374 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 187.14 154.67 1855.4 1331.5 933.22 2206.8 1690.1 1471.5 1739 1361 926 2097 1721 1415 7 9 3 10 9 9 1649000 22943 44;1313;1794;2013 22079 53474;53475;53476;53477;53478;53479;53480;53481;53482;53483 62089;62090;62091;62092;62093;62094;62095;62096;62097;62098;62099;62100;62101 62092 13 YMACCLLYR Oxidation (M) 1264.5403 0.54027017 1313;1794;44;2013 A0A0A0MQA5;P68368;P05213;P68369;Q3UX10 Tuba4a;Tuba1b;Tuba1a;Tubal3 Tubulin alpha-4A chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha chain-like 3 no no 0 0 1 0 9.5 0.5 1 1 57.739 57.739 2 0.003822 16197 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 139.27 116.22 217.69 0 202.48 166.45 213.18 57.361 204 0 195 167 213 56 2 0 2 2 2 1 38634 22944 44;1313;1794;2013 22079 53484;53485 62102;62103 62102 4 2 YMCENQATISSK Unmodified 1430.617 0.61700017 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 6 0 1 49.446 49.446 3 2.8801E-05 15076 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.093 63.232 78.505 81.654 81.631 64.658 80.888 86.17 74 83 83 65 83 83 1 1 1 1 1 1 6105.5 22945 1321 22080 53486 62104 62104 1 YMDAWNTVSR Unmodified 1241.5499 0.54990688 1708 P62075;A0A1W2P7H2 Timm13 Mitochondrial import inner membrane translocase subunit Tim13 yes no 0 0 0 0 7 0 1 60.457 60.457 2 0.00021758 19506 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 85.807 59.423 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22946 1708 22081 53487 62105 62105 1 YMDNDYAK Unmodified 1018.4066 0.40659669 775 D3Z4B2;Q9CWZ7 Napg Gamma-soluble NSF attachment protein yes no 0 0 0 0 8 3.56 1 1 1 48.182 48.182 2 0.013483 15249 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.219 50.234 49.225 56.265 0 71.045 27.631 87.69 46 56 0 65 28 83 1 2 0 1 1 2 8440.8 22947 775 22082 53488;53489;53490 62106;62107;62108 62106 3 YMEAFKPFLGIGLK Unmodified 1612.8687 0.86872182 1798 P70168 Kpnb1 Importin subunit beta-1 yes yes 0 0 0 1 12 0 1 87.737 87.737 4 0.00013229 24836 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 72.265 41.037 50.25 35.98 0 0 0 0 47 37 0 0 0 0 1 1 0 0 0 0 3145.4 22948 1798 22083 53491 62109 62109 1 YMGGFAGNITFPSVILK Unmodified 1813.9437 0.94367768 2950 Q9CQZ6 Ndufb3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 yes yes 0 0 0 0 11 0 1 90.795 90.795 4 0.0045687 29173 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 41.967 32.679 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 1697.6 22949 2950 22084 53492 62110 62110 1 YMHSGPVVAMVWEGLNVVK Unmodified 2115.0645 0.064537872 866;1385 E9PZF0;P15532;Q5NC80 Gm20390;Nme1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase A no no 0 0 0 0 11 0 2 86.954 86.954 3;4 1.4634E-10 27771 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 113.47 98.052 12 9.4345 8.4641 15.891 0 37 12 9 9 15 0 37 1 1 1 1 0 1 9211 22950 866;1385 22085 53493;53494 62111;62112;62113 62112 3 YMLLPNQVWDSIIQQATK Unmodified 2147.1085 0.10851118 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 11.5 0.5 1 1 102.07 102.07 3 1.1976E-13 28792 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 121.19 96.594 12.864 15.901 0 26.982 18.213 12.272 12 16 0 25 19 12 1 3 0 1 1 1 7567.3 22951 2222 22086 53495;53496 62114;62115;62116 62115 3 YMLSVDNLK Unmodified 1081.5478 0.54778161 118;1534 A0A0J9YUN4;A0A0J9YUE9;F6W8Z8;P39053 Dnm1 Dynamin-1 no no 0 0 0 0 10.2 2.32 2 1 2 68.403 68.403 2;3 1.6996E-05 25063 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 133.23 87.517 99.474 218.68 74.579 253.63 291.56 335.94 93 213 74 240 297 325 2 4 1 4 4 4 134150 22952 118;1534 22087 53497;53498;53499;53500;53501 62117;62118;62119;62120;62121;62122 62122 6 YMNSGPVVAMVWEGLNVVK Unmodified 2092.0486 0.048553457 866 E9PZF0;Q01768 Gm20390;Nme2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B yes no 0 0 0 0 11 1.1 2 2 1 99.699 99.699 3;4 2.9786E-16 32804 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 94.856 76.939 33.219 66.503 28 43.72 29.288 26.65 31 65 28 40 28 25 2 3 1 2 1 1 17078 22953 866 22088 53502;53503;53504;53505;53506 62123;62124;62125;62126;62127;62128;62129 62127 7 YNADEAR Unmodified 837.3617 0.3616954 2094 Q8BMJ3;Q60872 Eif1ax;Eif1a Eukaryotic translation initiation factor 1A, X-chromosomal;Eukaryotic translation initiation factor 1A yes no 0 0 0 0 3.5 0.5 1 1 28.225 28.225 2 0.017762 6610 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 110.12 59.993 93.597 61.396 86.903 20.767 69.863 106.74 88 65 83 19 69 102 2 2 1 1 1 2 13824 22954 2094 22089 53507;53508 62130;62131 62130 2 YNALLAVQK Unmodified 1018.5811 0.58113065 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 10.8 1.47 1 2 1 1 63.215 63.215 2;3 0.00067236 19478 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 90.601 56.804 320.79 510.71 467.12 415.92 464.78 407.81 302 513 473 414 476 395 1 4 4 4 4 4 119390 22955 65 22090 53509;53510;53511;53512;53513 62132;62133;62134;62135;62136 62132 5 YNCPSFLAAALAR Unmodified 1452.7184 0.71836919 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 0 0 0 10.8 1.48 1 1 1 1 73.044 73.044 2;3 0.00050498 24109 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 85.274 57.945 76.516 64.703 0 0 120 0 74 65 0 0 120 0 2 2 0 0 2 0 45544 22956 2302 22091 53514;53515;53516;53517 62137;62138;62139;62140;62141 62137 5 YNCPSFLAAALAR Deamidation (N) 1453.7024 0.70238478 2302 Q80TL0 Ppm1e Protein phosphatase 1E yes yes 0 1 0 0 9 0 1 73.037 73.037 3 0.039055 24090 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.996 21.692 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22957 2302 22091 53518 62142 62142 907 1 YNDLGEQHFK Unmodified 1249.5728 0.57275081 1321 P07724 Alb Serum albumin yes yes 0 0 0 0 7.4 2.87 1 2 1 1 48.256 48.256 3 1.6808E-05 15032 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 105.36 69.399 732.81 685.99 869.1 153.34 343.96 683.08 691 687 851 158 344 650 6 3 6 3 4 6 129570 22958 1321 22092 53519;53520;53521;53522;53523 62143;62144;62145;62146;62147;62148 62148 6 YNDPIYVK Unmodified 1010.5073 0.50729701 3123;1203 Q5SVG5;Q5SVG4;O35643;Q9DBG3;H3BIY9;H3BKM0 Ap1b1;Ap2b1 AP-1 complex subunit beta-1;AP-2 complex subunit beta;AP complex subunit beta no no 0 0 0 0 8.67 3.09 1 1 1 56.086 56.086 2 0.0032345 19012 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 124.23 90.152 608.69 462.88 279.41 283.98 381.72 545.56 571 478 288 278 386 522 3 3 2 2 2 3 82980 22959 1203;3123 22093 53524;53525;53526 62149;62150;62151 62151 3 YNEDLELEDAIHTAILTLK Unmodified 2200.1263 0.12632931 1589 P49722;Q8BKE0 Psma2 Proteasome subunit alpha type-2 yes no 0 0 0 0 6.33 0.471 2 1 95.153 95.153 3;4 8.3522E-06 35980 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 65.951 48.034 35.246 8.2041 20.483 49.618 35.103 53.364 33 9 19 46 37 51 2 1 1 1 1 2 5709.1 22960 1589 22094 53527;53528;53529 62152;62153;62154 62152 3 YNEIQNDYLR Unmodified 1326.6204 0.62042929 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 5.5 0.5 1 1 55.603 55.603 2 0.0044566 18625 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 78.096 27.973 30.044 19.152 0 70.529 27.454 39.442 28 18 0 65 28 37 1 1 0 2 1 1 8209.7 22961 3373 22095 53530;53531 62155;62156 62155 2 YNFFTGCPK Unmodified 1132.5012 0.50116577 1822 P80313;A0A0N4SV00 Cct7 T-complex protein 1 subunit eta yes no 0 0 0 0 11 0.816 1 1 1 64.672 64.672 2;3 0.00021134 15824 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 115.86 88.374 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26772 22962 1822 22096 53532;53533;53534 62157;62158;62159 62159 3 YNGLVTGMRAK Deamidation (N) 1209.6176 0.61759251 2076 Q60613 Adora2a Adenosine receptor A2a yes yes 0 1 0 1 7 0 1 37.895 37.895 4 0.046266 8898 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 48.741 16.807 88.692 72.756 0 108.92 136.46 114.43 83 74 0 102 139 111 1 1 0 1 1 1 1770 22963 2076 22097 53535 62160 62160 805 1 YNGVFQECCQAEDK Deamidation (N) 1747.6818 0.68178527 656 CON__P02769 yes yes 0 1 0 0 4 0 1 57.303 57.303 3 0.004199 19740 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 57.328 40.109 69.229 33.727 58.219 0 0 0 65 37 56 0 0 0 1 1 1 0 0 0 2729.4 + 22964 656 22098 53536 62161 62161 190 1 YNHIDESEMK Unmodified 1264.5394 0.53940177 2137 Q61699;E9Q0U7 Hsph1 Heat shock protein 105 kDa yes no 0 0 0 0 4 0 1 43.528 43.528 3 0.0087059 13145 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 53.237 39.331 0 48.944 0 0 67.99 0 0 46 0 0 65 0 0 1 0 0 1 0 4488.4 22965 2137 22099 53537 62162 62162 1 YNIIPVLSDILQESVK Unmodified 1830.0139 0.013865735 65 A0A0A6YX18;Q8BVE3;A0A0A6YWP6 Atp6v1h V-type proton ATPase subunit H yes no 0 0 0 0 10.7 1.39 2 1 2 1 1 105.19 105.19 3;4 1.028E-05 33584 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 101.96 65.186 97.155 64.858 64.912 106.61 129.43 116 91 65 63 100 127 110 6 4 3 6 6 6 49627 22966 65 22100 53538;53539;53540;53541;53542;53543;53544 62163;62164;62165;62166;62167;62168;62169;62170;62171;62172;62173 62167 11 YNILGTNTIMDK Unmodified 1381.6912 0.69115139 2714 Q8VEK3 Hnrnpu Heterogeneous nuclear ribonucleoprotein U yes yes 0 0 0 0 8.33 0.471 2 1 71.675 71.675 2;3 2.225E-11 24078 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.21 63.883 59.533 83.939 85.087 26.933 76.167 0 56 84 83 28 74 0 2 3 2 1 2 0 24901 22967 2714 22101 53545;53546;53547 62174;62175;62176 62174 3 YNILPVADGK Unmodified 1088.5866 0.58660996 2141 Q61838 A2m Alpha-2-macroglobulin;Alpha-2-macroglobulin 165 kDa subunit;Alpha-2-macroglobulin 35 kDa subunit yes yes 0 0 0 0 8 0 1 65.66 65.66 3 0.02019 21254 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 46.844 20.246 48.853 44.867 46.834 0 67.99 0 46 46 46 0 65 0 1 1 1 0 1 0 1983.7 22968 2141 22102 53548 62177 62177 1 YNIMLVR Unmodified 907.49496 0.49495818 1543 P42932;H3BL49;H3BJB6 Cct8 T-complex protein 1 subunit theta yes no 0 0 0 0 10 0 1 60.8 60.8 2 0.027706 16414 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 97.473 62.272 127.52 67.605 151.47 89.138 185.2 122.64 120 74 148 93 185 120 1 1 1 1 1 1 14220 22969 1543 22103 53549 62178 62178 1 YNLGAPVAGTCYQAEWDDYVPK Unmodified 2516.1318 0.13182539 1806 P70296;D3Z1V4 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 8.38 2.83 1 1 2 2 2 79.168 79.168 3;4 5.5231E-19 30421 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 114.72 92.917 296.84 226.15 144.46 158.12 336.45 222.11 278 223 139 150 334 214 5 6 3 4 6 5 164340 22970 1806 22104 53550;53551;53552;53553;53554;53555;53556;53557 62179;62180;62181;62182;62183;62184;62185;62186;62187 62186 9 YNLGISCINLGAYR Unmodified 1612.8032 0.80316145 721 D3YYH0;F8SLP9;F8SLQ3;F8SLQ1;Q8C437 Pex5l PEX5-related protein yes no 0 0 0 0 10 0 1 73.815 73.815 3 2.7634E-05 22279 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 75.669 44.841 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22971 721 22105 53558 62188 62188 1 YNLGLDLR Unmodified 962.51853 0.5185304 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 8 0 1 63.779 63.779 2 0.0011693 20364 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 134.81 78.909 338.64 267.57 385.92 337.9 453.69 378.28 319 279 387 338 461 367 1 1 1 1 1 1 62022 22972 1458 22106 53559 62189 62189 1 YNLNFHEAR Unmodified 1162.552 0.55195579 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 0 9.33 2.62 1 1 1 43.732 43.732 3 0.00077536 13012 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.392 56.961 385.39 249.02 615.41 428.05 553.47 580.97 363 266 602 430 567 556 2 2 3 2 3 2 58233 22973 3258 22107 53560;53561;53562 62190;62191;62192 62192 3 YNLPNQVTPLAR Unmodified 1384.7463 0.7462985 1275 O88737 Bsn Protein bassoon yes yes 0 0 0 0 8.5 0.5 1 1 59.267 59.267 2 0.00073383 18323 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 81.771 40.269 20.292 18.848 0 0 0 0 19 19 0 0 0 0 1 1 0 0 0 0 4555.3 22974 1275 22108 53563;53564 62193;62194 62193 2 YNLQSALR Unmodified 963.51378 0.51377937 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 7.5 0.5 1 1 52.35 52.35 2 0.015969 14913 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 78.192 34.377 54.049 54.823 66.768 0 94.991 66.579 51 56 65 0 93 65 1 1 1 0 1 1 6093.9 22975 1226 22109 53565;53566 62195;62196 62196 2 YNMGLPVDFDQYNELHLPAVILK Unmodified 2688.3622 0.36215968 2047 Q5FWK3;A2AH25 Arhgap1 Rho GTPase-activating protein 1 yes no 0 0 0 0 8 0 1 92.195 92.195 4 0.011821 33547 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 33.024 19.704 9.5851 14.25 0 9.6683 8.9699 0 9 14 0 9 9 0 1 1 0 1 1 0 1348.2 22976 2047 22110 53567 62197 62197 1 YNPENLATLER Unmodified 1318.6517 0.65172941 3133 Q9DBZ5;A0A140LJ59 Eif3k Eukaryotic translation initiation factor 3 subunit K yes no 0 0 0 0 5 0 1 58.495 58.495 2 0.0032852 20057 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.34 43.613 0 28.808 58.864 0 0 0 0 28 56 0 0 0 0 1 1 0 0 0 4081 22977 3133 22111 53568 62198 62198 1 YNPNVLPVQCTGK Unmodified 1488.7395 0.73949856 1369 P14094 Atp1b1 Sodium/potassium-transporting ATPase subunit beta-1 yes yes 0 0 0 0 8.75 1.98 1 1 2 2 1 1 58.848 58.848 2;3 1.3424E-20 17194 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 152.85 108.65 937.65 901.93 1036.8 185.5 1042.2 1076.1 882 918 1007 176 1036 1034 4 5 5 3 6 6 565520 22978 1369 22112 53569;53570;53571;53572;53573;53574;53575;53576 62199;62200;62201;62202;62203;62204;62205;62206 62203 8 YNPTWHCIVGR Unmodified 1401.6612 0.66118866 1776;3031 P63168;Q80ZS7;Q9D0M5 Dynll1;BC048507;Dynll2 Dynein light chain 1, cytoplasmic;Dynein light chain 2, cytoplasmic no no 0 0 0 0 10.8 1.48 1 1 1 1 51.555 51.555 2;3 1.483E-10 13882 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 135.8 108.68 330.38 61.654 464.73 165.84 132.04 381.06 310 65 448 167 134 361 2 1 3 2 1 2 301360 22979 1776;3031 22113 53577;53578;53579;53580 62207;62208;62209;62210;62211 62207 5 YNQIQLFAPAEWVALNYVPFAER Unmodified 2738.3857 0.38567232 2304 Q80TL7 Mon2 Protein MON2 homolog yes yes 0 0 0 0 10 0 1 105.29 105.29 3 0.0038174 33605 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 37.856 20.261 0 3.192 0 3.279 0 6.396 0 3 0 3 0 6 0 1 0 1 0 1 476.19 22980 2304 22114 53581 62212 62212 1 YNQQLEK Unmodified 921.4556 0.45559579 2249 Q6PH08;Q3UHT7 Erc2 ERC protein 2 yes no 0 0 0 0 6 0 1 43.138 43.138 2 0.027395 12098 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.114 43.411 0 38.068 77.784 0 0 69.29 0 37 74 0 0 65 0 1 1 0 0 1 3621.8 22981 2249 22115 53582 62213 62213 1 YNSLSILPAALGK Unmodified 1345.7606 0.76055158 3113 Q9DB60;B1AS14 Fam213b Prostamide/prostaglandin F synthase yes no 0 0 0 0 10 0 2 79.188 79.188 2;3 8.254E-05 24600 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 81.431 56.215 118.86 0 40.966 88.286 187.92 75.193 111 0 38 83 186 74 2 0 1 1 2 1 11165 22982 3113 22116 53583;53584 62214;62215 62214 2 YNSLSILPAALGKPVR Unmodified 1697.9828 0.98284038 3113 Q9DB60;B1AS14 Fam213b Prostamide/prostaglandin F synthase yes no 0 0 0 1 6.5 5.5 1 1 71.658 71.658 3 1.323E-16 24327 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.07 119.9 44.569 122.35 138.76 91.358 107.44 130.18 42 120 139 93 111 125 1 2 2 2 2 2 28290 22983 3113 22117 53585;53586 62216;62217 62216 2 YNSMVLICALMGSESLYK Unmodified 2077.9887 0.98865532 919;937 E9Q6Q4;E9Q912;Q3TU36 Rap1gds1 no no 0 0 0 0 11.5 0.5 1 1 98.34 98.34 3 2.2322E-07 28083 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.213 75.026 39.612 30.365 19.916 0 18.684 34.645 37 30 19 0 19 33 1 2 2 0 1 1 9278.9 22984 919;937 22118 53587;53588 62218;62219;62220 62219 3 YNSPELDEEGYSIRPEEPGSTK Unmodified 2496.1292 0.12924244 2691 Q8VD37 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 yes yes 0 0 0 1 3.5 0.5 2 2 57.31 57.31 3;4 2.3789E-12 19745 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 79.143 64.373 29.856 76.723 56 49.249 141.5 75.476 28 74 56 46 139 74 1 2 1 1 2 2 29588 22985 2691 22119 53589;53590;53591;53592 62221;62222;62223;62224 62224 4 YNTDAMSTAVALNNVQFLVPIDGGVTK Unmodified 2837.4269 0.42694478 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 8 0 1 92.678 92.678 4 0.034179 33638 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 26.187 19.823 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 1805.9 22986 2691;1024 22120 53593 62225 62225 1 YNTDCVQGLTHSK Unmodified 1521.6882 0.68819127 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 7.62 2.34 1 2 2 1 1 1 46.754 46.754 3;4 2.4479E-16 13010 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 141.87 115.44 1112.5 786.59 967.01 792.52 707 1261.2 1045 812 971 776 720 1202 8 7 8 8 4 9 216910 22987 106 22121 53594;53595;53596;53597;53598;53599;53600;53601 62226;62227;62228;62229;62230;62231;62232;62233;62234;62235;62236 62231 11 YNTPGFSGCLSGVR Unmodified 1513.6984 0.69836203 1226 O54991 Cntnap1 Contactin-associated protein 1 yes yes 0 0 0 0 8 0 1 57.617 57.617 2 0.0019116 17494 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 67.456 41.798 0 0 0 20.234 28.359 0 0 0 0 19 28 0 0 0 0 1 1 0 3198.1 22988 1226 22122 53602 62237 62237 1 YNTPGFTGCLSR Unmodified 1371.6241 0.62413446 970 E9QNF7;Q9CPW0 Cntnap2 Contactin-associated protein-like 2 yes no 0 0 0 0 8 0 1 54.334 54.334 2 0.0094339 15949 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 57.348 33.92 0 0 0 0 8.727 20.005 0 0 0 0 9 19 0 0 0 0 1 1 2083.5 22989 970 22123 53603 62238 62238 1 YNVITFLPR Unmodified 1121.6233 0.62332982 121 A0A0M3HEP7;P70704;A0A0J9YV34;Q3U9N5;F6Q8P7;E9Q4J5 Atp8a1 Phospholipid-transporting ATPase IA yes no 0 0 0 0 11 0.816 1 1 1 73.83 73.83 2 0.0046415 22282 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 86.136 42 283.13 99.156 119.6 164.13 277.17 298.03 265 102 111 153 278 287 3 1 1 2 2 3 42282 22990 121 22124 53604;53605;53606 62239;62240;62241 62239 3 YNVLGAETVLTQMR Unmodified 1593.8185 0.81847717 1873 Q00PI9 Hnrnpul2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 yes yes 0 0 0 0 9 0 1 75.594 75.594 2 0.0064186 25249 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.252 13.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22991 1873 22125 53607 62242 62242 1 YNVNGRDK 2 Deamidation (N) 966.44067 0.44067401 205 A0A0R4J1L1;Q9D504 Ankrd7 Ankyrin repeat domain-containing protein 7 yes no 0 2 0 1 8 0 1 81.069 81.069 2 0.029673 28555 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 51.995 11.974 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22992 205 22126 53608 62243 62243 69;70 1 YNVPFLTFINK Unmodified 1354.7285 0.72852317 2579 Q8K0D5 Gfm1 Elongation factor G, mitochondrial yes yes 0 0 0 0 8.33 5.19 1 2 88.279 88.279 2;3 0.00042577 24991 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 81.799 54.701 80.332 37.853 8.957 76.096 51.758 0 75 37 9 71 51 0 2 2 1 3 2 0 9975 22993 2579 22127 53609;53610;53611 62244;62245;62246 62246 3 YNVSQLEEWLR Unmodified 1435.7096 0.70957864 728 D3YZ62;D3Z4J3;Q99104;F6TDE5 Myo5a Unconventional myosin-Va yes no 0 0 0 0 13 0 1 80.392 80.392 2 0.018902 31038 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 57.003 29.139 0 38.618 44.847 58.535 0 59.696 0 37 46 56 0 56 0 1 1 1 0 1 5412.9 22994 728 22128 53612 62247 62247 1 YNYTSEEK Unmodified 1032.44 0.4400053 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 5 0 1 42.908 42.908 2 0.039564 12436 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.881 31.695 39.226 26.183 57.685 25.555 85.644 0 37 28 56 28 83 0 1 1 1 1 1 0 6507.8 22995 2057 22129 53613 62248 62248 1 YPDETPLYEIFSQENLEDNDVSDILK Unmodified 3085.4292 0.42917243 2933 Q9CQK7 Rwdd1 RWD domain-containing protein 1 yes yes 0 0 0 0 5.5 0.5 1 1 99.796 99.796 4 0.026223 35954 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 28.782 16.468 11.689 3.707 15.987 0 12.552 4.264 11 4 15 0 12 4 2 1 1 0 1 1 3391.2 22996 2933 22130 53614;53615 62249;62250 62249 2 YPDLYPQDEEEEEEAKPVEPVEETADTK Unmodified 3278.4514 0.45142402 2707 Q8VEA4 Chchd4 Mitochondrial intermembrane space import and assembly protein 40 yes yes 0 0 0 1 3 0 1 66.339 66.339 4 5.7043E-08 24139 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 57.299 42.926 0 0 40.034 0 49.162 0 0 0 37 0 47 0 0 0 1 0 1 0 5345 22997 2707 22131 53616 62251 62251 1 YPDYEVTWADDGY Unmodified 1592.6307 0.6307192 3101 Q9DAK9 Phpt1 14 kDa phosphohistidine phosphatase yes yes 0 0 0 0 6.67 4.5 1 1 1 81.33 81.33 2;3 0.00056087 30562 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 89.247 82.558 68.718 50.46 135.22 55.057 34.513 51.518 65 52 130 56 37 49 2 2 2 1 2 2 11667 22998 3101 22132 53617;53618;53619 62252;62253;62254 62253 3 YPEAPPSVR Unmodified 1014.5134 0.51344502 3014;3050 Q9CZY3;B7ZBY7;E9PY39;B7ZBY6;Q9D2M8;A6X925 Ube2v1;Gm20431;Ube2v2 Ubiquitin-conjugating enzyme E2 variant 1;Ubiquitin-conjugating enzyme E2 variant 2 no no 0 0 0 0 8 3.56 1 1 1 44.055 44.055 2 0.00052167 13300 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 123.72 88.276 136.58 292.32 293.4 178.17 314.14 336.42 129 288 287 176 315 324 2 4 3 3 3 4 44032 22999 3014;3050 22133 53620;53621;53622 62255;62256;62257;62258 62256 4 YPENFFLLR Unmodified 1197.6182 0.61824444 1710;1711;1770 P62137;P62141;P63087;A0A0G2JGC1;A0A0G2JFF1 Ppp1ca;Ppp1cb;Ppp1cc Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit no no 0 0 0 0 8.5 0.5 1 1 78.061 78.061 2 0.0046202 26469 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 86.205 58.469 179.63 140.41 168.53 112.15 173.05 80.31 169 146 169 111 173 77 2 2 2 1 2 1 27076 23000 1710;1711;1770 22134 53623;53624 62259;62260 62260 2 YPGGWVEK Unmodified 934.45487 0.45486751 2253 Q6PIE5 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes yes 0 0 0 0 8 0 1 57.704 57.704 2 0.051719 17520 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.895 28.83 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23001 2253 22135 53625 62261 62261 1 YPGQGSPGGNR Unmodified 1088.4999 0.49992022 1307 P04925 Prnp Major prion protein yes yes 0 0 0 0 7.75 3.11 1 1 1 1 31.397 31.397 2 0.0015839 6637 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.622 51.98 89.435 103.86 58.624 41.892 27.624 72.766 84 102 56 42 28 69 3 2 2 2 1 2 20742 23002 1307 22136 53626;53627;53628;53629 62262;62263;62264;62265 62263 4 YPHYFPLLK Unmodified 1176.6332 0.63316622 145 A0A0R4IZY0;Q8C1A5 Thop1 Thimet oligopeptidase yes no 0 0 0 0 11 0 1 66.171 66.171 3 0.0056479 18216 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 60.436 36.282 0 108.53 0 111.49 0 0 0 102 0 102 0 0 0 1 0 1 0 0 37355 23003 145 22137 53630 62266 62266 1 YPIEHGIITNWDDMEK Oxidation (M) 1975.8986 0.89857798 1791 P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 1 0 6.83 2.85 3 1 1 1 64.059 64.059 3;4 8.9417E-05 22336 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 85.988 64.147 463.31 288.77 515.41 351.71 453.24 433.94 436 305 509 353 463 417 6 5 6 5 6 5 147570 23004 1791 22138 53631;53632;53633;53634;53635;53636 62267;62268;62269;62270;62271;62272 62268 144 6 YPIEHGIITNWDDMEK Unmodified 1959.9037 0.90366336 1791 P68033;P68134;P62737;P63268;D3YZY0;A0A1D5RM20;D3Z2K3 Actc1;Acta1;Acta2;Actg2 Actin, alpha cardiac muscle 1;Actin, alpha skeletal muscle;Actin, aortic smooth muscle;Actin, gamma-enteric smooth muscle yes no 0 0 0 0 7.57 2.44 1 2 1 2 1 68.394 68.394 3;4 3.9134E-38 24163 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 156.17 120.42 1083.2 743.25 1553.6 1316.8 1032.8 1633.5 1017 759 1531 1299 1083 1554 6 5 8 9 9 9 887040 23005 1791 22138 53637;53638;53639;53640;53641;53642;53643 62273;62274;62275;62276;62277;62278;62279;62280;62281;62282;62283 62276 11 YPIHTPR Unmodified 882.47119 0.47118627 2122 Q61282 Acan Aggrecan core protein yes yes 0 0 0 0 10 3 1 1 35.497 35.497 3 0.024108 8974 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 58.981 33.155 0 40.432 0 0 38.702 0 0 38 0 0 37 0 0 1 0 0 1 0 3504.3 23006 2122 22139 53644;53645 62284;62285 62285 2 YPIITPSQR Unmodified 1073.5869 0.58694431 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 10 1.87 1 1 1 1 52.206 52.206 2 0.00047705 14179 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 124.98 79.265 744.11 404.13 472.46 517.06 533.15 499.62 698 409 465 508 537 479 4 2 3 4 3 3 90420 23007 2125 22140 53646;53647;53648;53649 62286;62287;62288;62289;62290 62287 5 YPILFLTQGK Unmodified 1178.6699 0.66994566 566 B0R058;Q8C0L9 Gpcpd1 Glycerophosphocholine phosphodiesterase GPCPD1 yes no 0 0 0 0 1 0 1 82.551 82.551 3 0.001228 28932 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 73.233 34.085 0 48.944 0 0 29.288 0 0 46 0 0 28 0 0 1 0 0 1 0 4141 23008 566 22141 53650 62291 62291 1 YPIPPPDAK Unmodified 996.52803 0.52803245 1500 P31938;A0A1W2P7V9 Map2k1 Dual specificity mitogen-activated protein kinase kinase 1 no no 0 0 0 0 9.2 3.12 1 2 2 54.907 54.907 2;3 0.0036554 16910 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 66.27 42.016 186.63 395.96 320.35 355.99 260.08 358.22 176 389 325 344 268 343 3 6 5 5 4 6 29595 23009 1500 22142 53651;53652;53653;53654;53655 62292;62293;62294;62295;62296;62297 62294 6 YPIQNPR Unmodified 886.4661 0.4661009 2125 Q61361 Bcan Brevican core protein yes yes 0 0 0 0 9.33 2.62 1 1 1 39.917 39.917 2;3 0.02215 9976 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 59.609 38.063 186.48 92.417 318.95 126.96 288.23 209.24 176 93 306 130 288 204 2 1 2 1 2 2 26326 23010 2125 22143 53656;53657;53658 62298;62299;62300 62298 3 YPIQTPR Unmodified 873.47085 0.47085192 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 7.5 0.5 1 1 44.528 44.528 2 0.0058039 11341 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 138.33 88.308 0 299.47 352.57 280.4 129.71 398.18 0 287 354 278 139 377 0 2 2 2 1 2 53048 23011 144 22144 53659;53660 62301;62302 62302 2 YPISRPR Unmodified 887.49774 0.49773538 3258 Q9QUP5 Hapln1 Hyaluronan and proteoglycan link protein 1 yes yes 0 0 0 1 9.5 0.5 1 1 33.277 33.277 3 0.0064426 6042 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 122.13 44.846 206.44 108.18 198.06 96.979 71.03 313.51 194 111 194 93 74 296 2 1 2 1 1 2 43403 23012 3258 22145 53661;53662 62303;62304 62303 2 YPITQSR Unmodified 863.45012 0.45011648 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 7.5 0.5 1 1 39.252 39.252 2 0.0055212 8824 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 133.79 89.024 287.32 0 221.36 293.25 152.7 247.22 269 0 218 283 159 236 2 0 2 2 1 2 20844 23013 144 22146 53663;53664 62305;62306 62306 2 YPLEEFTTDNQQEEAR Unmodified 1968.8701 0.87011462 1702 P61922 Abat 4-aminobutyrate aminotransferase, mitochondrial yes yes 0 0 0 0 3 0 1 64.534 64.534 3 0.00070706 23207 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 52.862 38.604 29.693 17.474 44.246 0 37.384 38.375 28 19 42 0 37 37 1 1 1 0 1 1 5293.6 23014 1702 22147 53665 62307 62307 1 YPLESGVPLPSPMDLMYK Unmodified 2035.9999 0.99987193 3373 Q9Z1B3 Plcb1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 yes yes 0 0 0 0 9 0 1 93.396 93.396 3 6.4877E-06 33277 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 69.805 54.651 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1752.6 23015 3373 22148 53666 62308 62308 1 YPLFEGQETGKK Unmodified 1395.7034 0.70343063 3002 Q9CZD3 Gars Glycine--tRNA ligase yes yes 0 0 0 1 7 0 1 56.667 56.667 3 0.0072518 17673 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.754 17.47 0 47.874 64.025 77.066 0 0 0 46 65 74 0 0 0 1 1 1 0 0 4117.8 23016 3002 22149 53667 62309 62309 1 YPLLLENIIK Unmodified 1214.7275 0.72746054 872 E9Q0A3;Q68FM7 Arhgef11 yes no 0 0 0 0 10 0 1 87.665 87.665 3 0.020097 28305 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 46.891 5.7023 20.33 0 9.6355 0 19.197 19.706 19 0 9 0 19 19 1 0 1 0 1 1 2314.6 23017 872 22150 53668 62310 62310 1 YPLQLAELLK Unmodified 1186.6962 0.69616041 89 A0A0G2JEU6;S4R1K5;B1AXI2;A0A0G2JE35;A0A0G2JEH1;B1AXI4;B1AXI6;Q3UTH8;A0A0G2JFA1;E0CYU0;E0CX56;E9Q3I3;E9PYK8;Q7TNR9;Q5DU57 Arhgef9;Spata13;Arhgef4 Rho guanine nucleotide exchange factor 9;Rho guanine nucleotide exchange factor 4;Spermatogenesis-associated protein 13 yes no 0 0 0 0 11 0 1 87.246 87.246 3 0.011822 27706 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.092 17.014 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2651.1 23018 89 22151 53669 62311 62311 1 YPLSSLMYTASK Unmodified 1359.6744 0.67443869 2072 Q5XG69 Fam169a Soluble lamin-associated protein of 75 kDa yes yes 0 0 0 0 11.5 0.5 1 1 74.371 74.371 3 0.0023971 19499 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 55.261 39.124 129.41 83.638 0 119.53 153.46 153.39 121 83 0 112 157 148 2 1 0 2 2 2 16314 23019 2072 22152 53670;53671 62312;62313 62313 2 YPMAVGLNK Unmodified 991.51609 0.51608756 1575 Q6ZWZ4;P47964 Rpl36 60S ribosomal protein L36 yes no 0 0 0 0 9.33 0.471 2 1 61.16 61.16 2;3 0.00092923 16552 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 110.63 54.086 49.128 113.99 48.033 139.97 54.683 47.476 46 111 46 129 56 46 1 3 1 2 1 1 10959 23020 1575 22153 53672;53673;53674 62314;62315;62316 62316 3 YPMIPPAQLFQLQAR Unmodified 1771.9443 0.94434638 3114 Q9DB72 Btbd17 BTB/POZ domain-containing protein 17 yes yes 0 0 0 0 11 0 1 84.357 84.357 3 0.030402 26344 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 35.891 1.0037 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 2647.8 23021 3114 22154 53675 62317 62317 1 YPNKYESIIATLCENLDSLDEPDAR Unmodified 2925.3702 0.37021776 3123 Q9DBG3;H3BIY9;H3BKM0 Ap2b1 AP-2 complex subunit beta;AP complex subunit beta yes no 0 0 0 1 8 0 2 93.58 93.58 3;4 4.205E-20 33866 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 85.371 67.87 29.952 18.196 15 0 0 5 28 19 15 0 0 5 1 1 1 0 0 1 2771.3 23022 3123 22155 53676;53677 62318;62319;62320 62318 3 YPQLLSGIR Unmodified 1045.592 0.59202969 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 9.5 0.5 1 1 64.969 64.969 2 0.0028496 18178 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 93.178 49.444 98.855 168.56 147.53 166.12 114.43 219.53 93 167 153 162 116 209 1 2 2 2 1 2 31231 23023 1594 22156 53678;53679 62321;62322 62322 2 YPSPFFVFGEK Unmodified 1316.6441 0.64412484 16 A0A087WPL5;E9QNN1;O70133 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 10.5 0.5 1 1 84.06 84.06 2;3 0.0049189 26706 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 67.207 42.369 60.088 29.792 0 30.604 0 108.73 56 28 0 28 0 102 1 1 0 1 0 2 11910 23024 16 22157 53680;53681 62323;62324 62323 2 YPSSVSAITDIK Unmodified 1279.666 0.66598249 1077 G3X920;Q9DBR3 Armc8 Armadillo repeat-containing protein 8 yes no 0 0 0 0 7 0 1 65.731 65.731 3 0.053456 21872 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 35.594 4.722 0 0 40.034 0 46.111 58.38 0 0 37 0 46 56 0 0 1 0 1 1 1908.4 23025 1077 22158 53682 62325 62325 1 YPTVLFIYGGPQVQLVNNR Unmodified 2177.1633 0.16332394 2338 Q80YA7 Dpp8 Dipeptidyl peptidase 8 yes yes 0 0 0 0 12 0 1 86.437 86.437 3 0.0010211 24244 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 47.904 38.74 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23026 2338 22159 53683 62326 62326 1 YPVATQK Unmodified 805.4334 0.43340378 510 A2ARP8;Q9QYR6 Map1a Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 yes no 0 0 0 0 7.5 0.5 1 1 43.808 43.808 2 0.012395 11702 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 117.93 50.899 186.68 151.58 235.83 115.88 145.39 99.138 176 158 232 111 139 93 2 2 2 1 1 1 25992 23027 510 22160 53684;53685 62327;62328 62327 2 YPVFLEK Unmodified 894.48511 0.485105 2418 Q8BJY1 Psmd5 26S proteasome non-ATPase regulatory subunit 5 yes yes 0 0 0 0 9 0 1 68.086 68.086 2 0.027718 21711 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 97.602 49.859 211.38 0 0 211.14 222.16 193 197 0 0 197 228 187 1 0 0 1 1 1 13458 23028 2418 22161 53686 62329 62329 1 YPVGVHFLPK Unmodified 1155.6441 0.64406526 1594 P50247 Ahcy Adenosylhomocysteinase yes yes 0 0 0 0 11 0 1 60.624 60.624 3 0.020168 15941 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 49.368 25.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23029 1594 22162 53687 62330 62330 1 YPVLTAR Unmodified 818.46504 0.46503826 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 9 0 1 49.161 49.161 2 0.032243 12712 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 79.939 51.517 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23030 3194 22163 53688 62331 62331 1 YPVNSVNILK Unmodified 1145.6445 0.64445919 1356 P11983 Tcp1 T-complex protein 1 subunit alpha yes yes 0 0 0 0 9.33 0.471 2 1 65.419 65.419 2;3 5.4204E-05 20509 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 111.61 69.498 39.265 122.15 172.72 228.75 249.71 37.346 37 120 176 223 250 37 1 2 2 2 2 1 40757 23031 1356 22164 53689;53690;53691 62332;62333;62334 62332 3 YPYWPHQPIENL Unmodified 1555.746 0.74596415 3156 Q9DCX2 Atp5h ATP synthase subunit d, mitochondrial yes yes 0 0 0 0 8 0 1 72.231 72.231 2 0.060943 24357 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 47.198 28.418 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23032 3156 22165 53692 62335 62335 1 YQALLLQVLEQIK Unmodified 1557.913 0.91302948 305 A0A1L1STC6;Q6ZWR6 Syne1 Nesprin-1 yes no 0 0 0 0 12 0 1 104.22 104.22 3 0.00015236 29121 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 71.558 48.679 0 12.618 8.981 0 0 0 0 12 9 0 0 0 0 1 1 0 0 0 586.05 23033 305 22166 53693 62336 62336 1 YQAVLANLLLEEDNK Unmodified 1731.9043 0.90431529 2285 Q7TN29 Smap2 Stromal membrane-associated protein 2 yes yes 0 0 0 0 8 0 1 87.788 87.788 3 0.0012819 31777 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.254 39.054 9.612 8.9279 0 0 0 9.594 9 9 0 0 0 9 1 1 0 0 0 1 875.2 23034 2285 22167 53694 62337 62337 1 YQAVTATLEEK Unmodified 1251.6347 0.63468237 1416 P19253;A0A1B0GSQ6;A0A1B0GTA1;A0A1B0GS68;A0A140T8K2;A0A1B0GQW6;A0A1B0GSF0 Rpl13a 60S ribosomal protein L13a yes no 0 0 0 0 7 0 1 61.417 61.417 3 0.0005106 19899 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.692 41.58 0 29.792 0 29.749 45.439 38.145 0 28 0 28 46 37 0 1 0 1 1 1 3573.1 23035 1416 22168 53695 62338 62338 1 YQCDEGFSQHR Unmodified 1425.5732 0.57316152 144 A0A0R4IZX5;P55066 Ncan Neurocan core protein yes no 0 0 0 0 4 0.816 1 1 1 34.934 34.934 3 4.6541E-06 9676 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 103.43 83.154 80.069 46.934 28.468 99.952 0 0 75 46 28 93 0 0 3 1 1 3 0 0 9293.2 23036 144 22169 53696;53697;53698 62339;62340;62341 62339 3 YQDDFLLDESECR Unmodified 1688.6988 0.69881554 102 A0A0G2JGQ6;Q9JLM8;Q80VB6 Dclk1 Serine/threonine-protein kinase DCLK1 yes no 0 0 0 0 2.5 0.5 1 1 66.87 66.87 3 8.72E-05 24369 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 82.515 46.624 20.387 0 60.592 0 49.162 0 19 0 56 0 47 0 1 0 1 0 2 0 7920.2 23037 102 22170 53699;53700 62342;62343 62343 2 YQDTPGVK Unmodified 906.4447 0.44469675 2020 Q91V92;Q3V117 Acly ATP-citrate synthase yes no 0 0 0 0 6 0 1 42.972 42.972 3 0.0061985 12014 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 71.379 44.125 0 48.944 0 71.045 0 59.696 0 46 0 65 0 56 0 1 0 1 0 1 4747.7 23038 2020 22171 53701 62344 62344 1 YQEALHLGSQLLR Unmodified 1526.8205 0.82052608 2369 Q8BG32;G3UZ33 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 0 9 0 1 66.895 66.895 3 0.000983 21157 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 61.657 37.806 39.293 0 68.512 36.358 0 49.036 37 0 65 37 0 46 1 0 1 1 0 1 8492.7 23039 2369 22172 53702 62345 62345 1 YQECDSR Unmodified 956.36579 0.3657945 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 2 0 1 26.016 26.016 2 0.019894 5320 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 107.29 35.58 0 0 38.788 27.968 17.252 38.95 0 0 37 28 19 37 0 0 1 1 1 1 5703.6 23040 468 22173 53703 62346 62346 1 YQEIEEDR Unmodified 1080.4724 0.47236807 550 D3Z1Q6;G3UXR7;G3X927;D3YW42;Q8VC31;A3KGF9 Ccdc9 Coiled-coil domain-containing protein 9;Uncharacterized protein C15orf52 homolog yes no 0 0 0 0 1 0 1 41.567 41.567 2 0.0079317 11817 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 104.17 60.921 33.896 30.964 47.743 0 32.332 33.189 32 32 46 0 32 32 1 1 1 0 1 1 4027.7 23041 550 22174 53704 62347 62347 1 YQEVTNNLEFAK Deamidation (N) 1455.6882 0.6881745 2093 Q60865 Caprin1 Caprin-1 yes yes 0 1 0 0 6 0 1 64.497 64.497 3 2.1569E-05 22130 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 84.718 62.845 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23042 2093 22175 53705 62348 62348 810 1 YQFNYFEAK Unmodified 1208.5502 0.55022446 3194 Q9ESM3 Hapln2 Hyaluronan and proteoglycan link protein 2 yes yes 0 0 0 0 9.5 2.06 2 1 1 67.456 67.456 2;3 0.00094181 22179 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 110.14 69.784 198.6 99.091 131.92 94.612 177.06 174.04 186 102 130 92 177 168 3 3 3 2 3 3 20193 23043 3194 22176 53706;53707;53708;53709 62349;62350;62351;62352 62350 4 YQFVTEPEDEEDEEDEEEEEDDEDLEELEVLER Unmodified 4102.6346 0.63460551 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 1 0 1 88.645 88.645 4 1.0294E-09 31656 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 53.987 52.497 5.333 0 5.3831 0 0 0 5 0 5 0 0 0 1 0 1 0 0 0 2091.8 23044 2886 22177 53710 62353 62353 1 YQGLTILVK Unmodified 1033.6172 0.61718181 468 A2AI19;A2AI20;A2AI21;P35438;A2AI16;A2AI17;A2AI14 Grin1 Glutamate receptor ionotropic, NMDA 1 yes no 0 0 0 0 10 0 1 71.089 71.089 2 0.00090847 21017 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 111.46 52.815 87.755 130.59 108.56 73.196 64.628 0 83 130 111 74 65 0 1 1 1 1 1 0 10539 23045 468 22178 53711 62354 62354 1 YQGVNLYIK Unmodified 1096.5917 0.59169534 549 Q91YZ8;A3KFU5;A3KFU8;Q6PHQ9 Pabpc4 Polyadenylate-binding protein yes no 0 0 0 0 9 0 1 64.077 64.077 2 0.0009665 19827 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 92.439 47.992 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23046 549 22179 53712 62355 62355 1 YQGVNLYVK Unmodified 1082.576 0.57604528 1484 P29341;A2A5N3 Pabpc1;Pabpc1l Polyadenylate-binding protein 1;Polyadenylate-binding protein yes no 0 0 0 0 10 2.16 1 1 1 60.464 60.464 2 0.0022748 18041 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 95.741 54.754 60.088 0 58.019 97.358 44.29 118.13 56 0 56 93 46 112 1 0 1 2 1 2 11130 23047 1484 22180 53713;53714;53715 62356;62357;62358 62357 3 YQHDDGR Unmodified 889.36784 0.36784341 2930 Q9CQI3;A0A2I3BR94;A0A2I3BPS1 Gmfb Glia maturation factor beta yes no 0 0 0 0 3.5 1.12 1 1 1 1 17.976 17.976 3 0.0024818 2481 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 117.39 90.715 77.626 40.983 93.099 66.899 72.505 12.792 73 42 91 67 72 12 4 2 4 4 3 1 33509 23048 2930 22181 53716;53717;53718;53719 62359;62360;62361;62362;62363 62362 5 YQIFIPMVNK Unmodified 1251.6686 0.66856545 3243 Q9JLN9 Mtor Serine/threonine-protein kinase mTOR yes yes 0 0 0 0 12 0 1 80.001 80.001 3 0.032379 21591 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.336 19.419 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 0 5764.2 23049 3243 22182 53720 62364 62364 1 YQILNNEVFAILNK Unmodified 1677.909 0.90900673 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 11 1.63 1 1 1 91.806 91.806 3 3.738E-05 32583 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 77.912 49.615 0 34.048 0 30.604 0 0 0 32 0 28 0 0 0 1 0 1 0 0 7780.1 23050 2057 22183 53721;53722;53723 62365;62366;62367 62365 3 YQILPLHSQIPR Unmodified 1463.8249 0.82488317 16 A0A087WPL5;E9QNN1;O70133;Q3UR42 Dhx9 ATP-dependent RNA helicase A yes no 0 0 0 0 11 0 1 57.587 57.587 3 0.00021579 14606 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 72.496 41.268 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7792.1 23051 16 22184 53724 62368 62368 1 YQIPALAQAGFR Unmodified 1333.7143 0.71427009 1511 P34914;A8JYK8 Ephx2 Bifunctional epoxide hydrolase 2;Cytosolic epoxide hydrolase 2;Lipid-phosphate phosphatase yes no 0 0 0 0 9.5 0.5 1 1 70.533 70.533 2;3 0.0013662 20753 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 59.198 34.817 0 77.503 73.742 37.617 35.984 28.821 0 74 74 37 37 28 0 2 2 1 1 1 7346.9 23052 1511 22185 53725;53726 62369;62370 62370 2 YQLDPTASISAK Unmodified 1292.6612 0.66123147 2096 Q60930;G3UX26 Vdac2 Voltage-dependent anion-selective channel protein 2 yes no 0 0 0 0 8.5 2.69 1 1 1 1 61.36 61.36 2;3 7.5898E-15 21647 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 140.63 88.901 424.18 149.78 535.96 324.91 203.73 329.98 399 158 519 324 213 315 4 2 4 3 2 3 108000 23053 2096 22186 53727;53728;53729;53730 62371;62372;62373;62374 62374 4 YQLLQLVEPFGVISNHLILNK Unmodified 2437.3733 0.37331671 2602 Q8K310;A0A087WSP7;A0A087WQZ1;A0A087WQ54 Matr3;Gm28285 Matrin-3 yes no 0 0 0 0 12 0 1 98.26 98.26 4 5.5079E-05 28147 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 51.611 42.328 28.757 19.545 19.359 26.797 61.529 0 27 19 19 25 60 0 2 1 1 1 2 0 3892.7 23054 2602 22187 53731 62375;62376 62376 2 YQLNLPSYPDTECVYR Unmodified 2016.9251 0.92512708 2617 Q8K4Z3 Apoa1bp NAD(P)H-hydrate epimerase yes yes 0 0 0 0 8.67 3.09 1 1 1 70.798 70.798 3 6.1621E-06 24361 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.324 65.051 109.94 84.277 26.008 150.65 43.578 97.894 103 84 28 140 46 93 4 2 1 4 1 3 18290 23055 2617 22188 53732;53733;53734 62377;62378;62379;62380 62378 4 YQLSIHER Unmodified 1044.5352 0.53524309 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 6.5 0.5 1 1 40.436 40.436 3 0.0022015 10832 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.309 52.433 156.96 143.75 187.48 97.857 94.332 85.786 148 148 186 93 93 83 2 2 2 1 1 1 53191 23056 2253 22189 53735;53736 62381;62382 62381 2 YQLSIHETEDPNDNR Deamidation (N) 1830.802 0.80203506 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 1 0 0 3.5 0.5 1 1 47.861 47.861 3 0.00021811 15205 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.39 80.092 49.128 45.631 18.806 39.32 37.384 38.375 46 46 19 37 37 37 1 1 1 1 1 1 6357.4 23057 106 22190 53737;53738 62383;62384 62384 47 2 YQLSIHETEDPNDNR Unmodified 1829.818 0.81801947 106 A0A0G2JGX4;Q6PIC6;Q8VCE0 Atp1a3 Sodium/potassium-transporting ATPase subunit alpha-3 yes no 0 0 0 0 5 0.816 1 1 1 46.198 46.198 3 4.2206E-42 14441 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 182.35 150.52 152.29 99.644 199.16 80.435 152.21 192.08 143 102 190 75 148 186 4 3 4 2 2 4 89747 23058 106 22190 53739;53740;53741 62385;62386;62387;62388;62389;62390 62385 6 YQLSIHK Unmodified 887.4865 0.48650199 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 0 7.8 3.54 1 1 1 1 1 48.079 48.079 3 0.005391 10894 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 88.294 35.578 424.22 460.29 668.9 263.71 257.34 597.63 399 470 651 256 264 565 2 4 3 2 2 3 128210 23059 2699 22191 53742;53743;53744;53745;53746 62391;62392;62393;62394;62395 62394 5 YQLSIHKNPNASEPK Unmodified 1724.8846 0.8845829 2699 Q8VDN2 Atp1a1 Sodium/potassium-transporting ATPase subunit alpha-1 yes yes 0 0 0 1 9 0 1 45.22 45.22 4 0.0031721 10967 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 50.787 30.419 60.088 0 0 59.804 74.657 0 56 0 0 56 74 0 1 0 0 1 1 0 4042.5 23060 2699 22192 53747 62396 62396 1 YQMLAFVHK Unmodified 1135.5848 0.58483582 2046 Q5F258;Q68FF6 Git1 ARF GTPase-activating protein GIT1 yes no 0 0 0 0 11.5 0.5 1 1 64.194 64.194 3 0.0014522 17402 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.684 55.441 93.338 90.896 105.41 99.739 0 103.4 88 93 107 97 0 97 1 1 1 1 0 1 8945.5 23061 2046 22193 53748;53749 62397;62398 62397 2 YQNLLNEFSR Unmodified 1282.6306 0.63060004 728 D3YZ62;D3Z4J3;Q99104 Myo5a Unconventional myosin-Va yes no 0 0 0 0 8 0 1 70.403 70.403 2 0.0056611 23519 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.849 46.675 49.026 65.854 0 0 0 108.73 46 65 0 0 0 102 1 1 0 0 0 1 11303 23062 728 22194 53750 62399 62399 1 YQQAGLPLIVLAGK Unmodified 1469.8606 0.86059998 1472 P28271 Aco1 Cytoplasmic aconitate hydratase yes yes 0 0 0 0 10.7 0.471 1 2 82.344 82.344 2;3 8.2518E-05 25627 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 93.766 70.53 69.387 9.576 143.24 20.234 105.76 0 65 9 139 19 102 0 1 1 2 1 2 0 27099 23063 1472 22195 53751;53752;53753 62400;62401;62402 62401 3 YQQEVDR Unmodified 936.43011 0.43010932 1481;2139;1507 P28738;Q61768;P33175 Kif5c;Kif5b;Kif5a Kinesin heavy chain isoform 5C;Kinesin-1 heavy chain;Kinesin heavy chain isoform 5A no no 0 0 0 0 4 0 1 32.058 32.058 2 0.013185 7799 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 116.25 54.251 0 14.11 47.005 43.104 0 44.772 0 14 46 42 0 42 0 1 1 1 0 1 5888.8 23064 1481;2139;1507 22196 53754 62403 62403 1 YQQGDFGYCPR Unmodified 1389.5772 0.57718426 1789 P67871;G3UZA4;G3UZJ5;G3UZX4;G3UXG7;G3UXU2 Csnk2b Casein kinase II subunit beta yes no 0 0 0 0 8 3.56 1 1 1 49.406 49.406 2 4.6838E-09 15871 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 112.83 76.452 20.223 65 27.586 58.537 54.586 37.884 19 65 28 56 56 37 1 1 1 1 1 1 9306.5 23065 1789 22197 53755;53756;53757 62404;62405;62406 62404 3 YQTEQSLR Unmodified 1023.4985 0.49852324 649;663 CON__O76011;CON__Q8IUT8;CON__Q14525 no no 0 0 0 0 4.5 0.5 1 1 36.25 36.25 2 0.01679 9318 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 81.163 23.352 0 29.478 38.475 19.594 0 148.17 0 28 38 19 0 139 0 1 2 1 0 1 6986.5 + 23066 649;663 22198 53758;53759 62407;62408 62408 2 YQVDLSK Unmodified 851.43888 0.43888309 2253 Q6PIE5;D3YYN7 Atp1a2 Sodium/potassium-transporting ATPase subunit alpha-2 yes no 0 0 0 0 10 3 1 1 53.401 53.401 2 0.02386 17767 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 102.51 38.949 305.81 269.97 310.98 271.85 134.91 282.9 288 278 315 268 139 269 2 2 2 2 1 2 39351 23067 2253 22199 53760;53761 62409;62410 62410 2 YQVDPDACFSAK Unmodified 1399.6078 0.60781569 2097 Q60932 Vdac1 Voltage-dependent anion-selective channel protein 1 yes yes 0 0 0 0 7.4 2.87 1 2 1 1 59.179 59.179 2;3 2.0238E-18 19721 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 151.13 117.72 987.73 711.24 1020.4 799.65 584.34 677.29 929 744 1020 788 616 651 6 6 7 5 6 6 209060 23068 2097 22200 53762;53763;53764;53765;53766 62411;62412;62413;62414;62415;62416;62417 62415 7 YQVGVHYELTEEEK Unmodified 1722.8101 0.81008055 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 5 0 1 55.302 55.302 3 0.04349 18406 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 34.302 13.052 0 39.368 0 20.767 0 29.848 0 37 0 19 0 28 0 1 0 1 0 1 2316.2 23069 3204 22201 53767 62418 62418 1 YQVLLDGLVLQGLYQLLEPR Unmodified 2329.3046 0.30456845 1597 P50518 Atp6v1e1 V-type proton ATPase subunit E 1 yes yes 0 0 0 0 12.2 0.829 1 1 2 121.31 121.31 3;4 1.0946E-22 38125 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.36 113.48 12.219 2.128 0 12.206 14.056 6.1376 12 2 0 12 14 6 2 1 0 2 3 2 22181 23070 1597 22202 53768;53769;53770;53771 62419;62420;62421;62422;62423;62424;62425;62426 62420 8 YQVSAQGIQSTPLNLAVNWR Unmodified 2244.1651 0.16511485 2691;1024 Q8VD37;F7CPX0 Sgip1 SH3-containing GRB2-like protein 3-interacting protein 1 no no 0 0 0 0 10 0.816 1 1 1 79.408 79.408 3 4.9892E-13 24769 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 107.72 82.67 29.872 50.008 28.859 89.39 37.328 0 28 47 28 84 37 0 1 2 1 3 1 0 30863 23071 2691;1024 22203 53772;53773;53774 62427;62428;62429 62428 3 YQVSVNK Unmodified 836.43922 0.43921744 2580 Q8K0E8 Fgb Fibrinogen beta chain;Fibrinopeptide B;Fibrinogen beta chain yes yes 0 0 0 0 8 0 1 46.095 46.095 2 0.0381 12274 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 79.809 27.173 0 0 27.203 69.424 0 49.036 0 0 28 65 0 46 0 0 1 1 0 1 3891.2 23072 2580 22204 53775 62430 62430 1 YQYGGLNSGRPVTPPR Unmodified 1760.8958 0.89581629 1711 P62141;A0A0J9YUU8 Ppp1cb Serine/threonine-protein phosphatase PP1-beta catalytic subunit yes no 0 0 0 1 10 2.16 1 1 1 44.689 44.689 3 2.2009E-05 11531 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 76.82 55.963 69.27 181.01 94.951 204.2 174.27 67.01 65 176 93 195 176 65 1 3 1 3 2 1 23354 23073 1711 22205 53776;53777;53778 62431;62432;62433 62431 3 YRDNYEGYAPSDGYYR Unmodified 1987.8337 0.83366954 2370 Q8BG39 Sv2b Synaptic vesicle glycoprotein 2B yes yes 0 0 0 1 7.33 4.03 1 1 1 48.081 48.081 3 2.0624E-07 15491 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 111.78 99.648 69.532 47.185 68.391 30.604 58.576 29.848 65 47 65 28 56 28 2 2 2 1 2 1 17025 23074 2370 22206 53779;53780;53781 62434;62435;62436 62434 3 YRFEIAAEK Unmodified 1125.5819 0.58185893 2386 Q8BGT8;F7D3N3 Phyhipl Phytanoyl-CoA hydroxylase-interacting protein-like yes no 0 0 0 1 7 0 1 52.954 52.954 3 0.012822 15895 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.374 46.238 88.74 63.176 0 59.43 94.548 0 83 65 0 56 93 0 1 1 0 1 1 0 4050.4 23075 2386 22207 53782 62437 62437 1 YRPGTVALR Unmodified 1031.5876 0.58761301 1300 P84244;P02301;E0CZ27;F8WI35;A0A1W2P768;P84228;P68433;E0CYN1;E0CYR7 H3f3a;H3f3c;Hist1h3b;Hist1h3a Histone H3.3;Histone H3.3C;Histone H3;Histone H3.2;Histone H3.1 yes no 0 0 0 1 10 1.87 1 1 1 1 38.018 38.018 3 0.00016983 8009 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 129.28 75.764 2651.2 1412.3 2797.2 2522.9 2280.2 2718.5 2493 1433 2750 2500 2370 2608 5 3 4 5 4 4 573580 23076 1300 22208 53783;53784;53785;53786 62438;62439;62440;62441;62442 62439 5 YRPPPQTNLLAPK Unmodified 1493.8354 0.83544786 3261 Q9QVP9;E9Q2A6;Q3UDE9;F7CCX1 Ptk2b Protein-tyrosine kinase 2-beta yes no 0 0 0 1 10 0 2 52.441 52.441 3;4 0.00033826 12696 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 87.216 54.61 68.745 189.6 155.7 55.091 63.142 146.37 65 185 157 56 65 139 1 2 2 1 1 2 15838 23077 3261 22209 53787;53788 62443;62444 62443 2 YSALIIGMAYGAK Unmodified 1356.7112 0.71115855 1889 Q06185;Q8BTB6 Atp5i;Atp5k ATP synthase subunit e, mitochondrial yes no 0 0 0 0 8.67 5.44 1 1 1 81.017 81.017 2;3 3.8257E-14 28461 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 109.42 85.862 0 29.792 0 61.208 0 0 0 28 0 56 0 0 0 1 0 1 0 0 7204.6 23078 1889 22210 53789;53790;53791 62445;62446;62447 62445 3 YSAPANLYVR Unmodified 1152.5928 0.59275797 642 G3UYU6;G3UX60;G3UWK6;E9Q7I7;E9PVW8;B9EJA3;G3UY75;Q64487;A2A8L5;A0A1Y7VNR5 Ptprd;Ptprf Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase delta;Receptor-type tyrosine-protein phosphatase F yes no 0 0 0 0 8 0 1 53.173 53.173 2 0.046067 15349 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 52.79 8.4804 0 44.007 40.741 46.303 82.246 71.207 0 42 42 46 83 69 0 1 1 1 1 1 5770.4 23079 642 22211 53792 62448 62448 1 YSDFEWLK Unmodified 1086.5022 0.50221163 1259 Q6ZWQ5;Q3TGS7;Q3V2H3;O70493 Snx12 Sorting nexin-12 yes no 0 0 0 0 9.33 2.62 1 1 1 75.287 75.287 2 0.0078284 28460 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 104.44 62.328 225.52 298.13 159.7 205.86 92.813 57.883 212 297 158 195 93 56 3 4 2 3 2 1 23834 23080 1259 22212 53793;53794;53795 62449;62450;62451;62452 62452 4 YSDKELQYIDAISNK Unmodified 1785.8785 0.87849447 607 B1AZ46;Q8BKX1 Baiap2 Brain-specific angiogenesis inhibitor 1-associated protein 2 yes no 0 0 0 1 10 3 1 1 68.418 68.418 3;4 5.1509E-06 25059 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 106.6 62.303 228.04 0 86.348 64.193 164.76 203.17 213 0 83 65 167 195 2 0 1 1 2 2 13029 23081 607 22213 53796;53797 62453;62454 62454 2 YSDVEVPASVTGHSFASDGDSGTCSPLR Unmodified 2897.2774 0.27738001 3276 Q9QYC0;F8WHZ9;F8WGR0;E9Q1K3;F6V4G5 Add1 Alpha-adducin yes no 0 0 0 0 4 0 1 62.221 62.221 3 2.807E-08 22024 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 58.272 51.696 0 0 0 0 0 19 0 0 0 0 0 19 0 0 0 0 0 1 2507.9 23082 3276 22214 53798 62455 62455 1 YSEATEHPGAPPQPPAPLQPALAPPSR Unmodified 2775.398 0.39802792 2295 Q7TSJ2;D3Z6W1 Map6 Microtubule-associated protein 6 yes no 0 0 0 0 4.67 0.471 1 2 58.153 58.153 3;4 2.7364E-17 19806 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.606 73.683 39.044 0 28 0 37.714 28.772 37 0 28 0 37 28 2 0 1 0 1 1 17315 23083 2295 22215 53799;53800;53801 62456;62457;62458 62457 3 YSEEANRIEECEQAER Unmodified 2011.8541 0.85414698 2637 Q8R180 Ero1l ERO1-like protein alpha yes yes 0 0 0 1 1 0 1 44.452 44.452 3 4.5834E-08 12816 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 82.529 63.697 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23084 2637 22216 53802 62459 62459 1 YSELTTLTSQYIK Unmodified 1545.7926 0.79263957 3266 Q9QXS1;E9Q3W4 Plec Plectin yes no 0 0 0 0 8 0.816 1 1 1 76.027 76.027 3 3.1368E-11 26192 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 117.2 93.524 48.898 59.584 77.3 126.25 74.205 78.884 46 56 74 121 74 74 1 1 1 2 1 1 9939 23085 3266 22217 53803;53804;53805 62460;62461;62462 62461 3 YSEVFEAINITNNEK Unmodified 1769.8472 0.84719434 2083 Q60737;Q6NSS6;A2ANR6 Csnk2a1 Casein kinase II subunit alpha yes no 0 0 0 0 6.5 0.5 1 1 77.321 77.321 3 0.0011688 27352 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.328 30.19 29.604 17.227 59.409 0 28.62 19.437 28 19 56 0 28 19 1 1 1 0 1 1 5254.8 23086 2083 22218 53806;53807 62463;62464 62464 2 YSFLQFDPAPR Unmodified 1339.6561 0.65608651 1787;1731 P62715;P63330 Ppp2cb;Ppp2ca Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform;Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform no no 0 0 0 0 10.2 2.11 2 1 1 2 74.141 74.141 2;3 8.5049E-10 24502 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 134.84 95.822 345.51 207.74 421.39 317.54 489.13 380.52 325 208 413 315 491 366 7 3 7 6 6 6 157710 23087 1731;1787 22219 53808;53809;53810;53811;53812;53813 62465;62466;62467;62468;62469;62470;62471;62472 62467 8 YSFMATVTK Unmodified 1046.5107 0.51066783 2298 Q80SW1 Ahcyl1 Putative adenosylhomocysteinase 2 yes yes 0 0 0 0 11 0 1 64.53 64.53 2 2.713E-05 17548 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 144.5 89.721 138.24 0 210.29 0 183.25 177.06 130 0 195 0 181 171 1 0 1 0 1 1 14405 23088 2298 22220 53814 62473 62473 1 YSFNEQVLNTNMYCK Deamidation (N) 1910.8179 0.81788482 3412 yes yes 0 1 0 0 3 0 1 98.773 98.773 3 0.0024909 32509 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 58.487 40.742 24.388 33.12 20.794 20.205 22.126 29.217 23 33 22 20 23 28 1 1 1 1 1 1 13306 + 23089 3412 22221 53815 62474 62474 1147 1 YSGAELVWCQEEHK Unmodified 1734.7672 0.76716988 628 B2RXT3;E9Q7L0 Ogdhl yes no 0 0 0 0 6 0 1 58.161 58.161 3 0.0070722 19255 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 45.614 32.495 39.468 46.283 0 0 85.547 37.001 37 46 0 0 83 37 1 1 0 0 1 1 5086.4 23090 628 22222 53816 62475 62475 1 YSGGPQIVK Unmodified 947.50763 0.50763136 2733 Q91V89 Ppp2r5d yes yes 0 0 0 0 7 0 1 50.128 50.128 3 0.011854 14528 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 53.751 22.379 69.745 0 0 49.447 44.204 47.775 65 0 0 46 46 46 1 0 0 1 1 1 2487.2 23091 2733 22223 53817 62476 62476 1 YSGSQLLQK Unmodified 1022.5397 0.53965977 3378 Q9Z1L5 Cacna2d3 Voltage-dependent calcium channel subunit alpha-2/delta-3;Voltage-dependent calcium channel subunit alpha-2-3;Voltage-dependent calcium channel subunit delta-3 yes yes 0 0 0 0 9 0 1 54.004 54.004 2 0.011122 15028 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 73.985 36.794 0 48.944 0 90.434 73.25 0 0 46 0 84 74 0 0 1 0 1 1 0 3263.5 23092 3378 22224 53818 62477 62477 1 YSHVQEVQER Unmodified 1273.6051 0.60511357 1813 Q4FE56;P70398;F8VPU6;E9PWA9;G3UY52 Usp9x;Usp9y Ubiquitin carboxyl-terminal hydrolase;Probable ubiquitin carboxyl-terminal hydrolase FAF-X yes no 0 0 0 0 4 0 1 30.346 30.346 3 3.41E-05 7046 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 86.344 43.048 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23093 1813 22225 53819 62478 62478 1 YSIGGLSPNSEYEIWVSAVNSIGQGPPSESVVTR Unmodified 3578.7529 0.75290661 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 8 0 1 96.855 96.855 4 0.0093205 34840 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 25.306 14.403 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1017.1 23094 568 22226 53820 62479 62479 1 YSLEGGR Unmodified 780.37662 0.37661719 3449;3451;3452 S4R2F3;Q8C8R3;S4R1J9;S4R2R5;S4R2T7 Ank2 Ankyrin-2 no no 0 0 0 0 5 0 1 38.883 38.883 2 0.04914 10569 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 76.774 50.172 99.122 61.473 60.029 137.22 68.458 76.931 93 65 65 130 74 74 1 1 1 1 1 1 10906 23095 3449;3451;3452 22227 53821 62480 62480 1 YSLEPVAAELK Unmodified 1218.6496 0.64960415 1334 P09411;S4R2M7 Pgk1 Phosphoglycerate kinase 1;Phosphoglycerate kinase yes no 0 0 0 0 7.12 2.42 2 2 2 1 1 68.931 68.931 2;3 1.1233E-25 24229 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 180.07 130.03 394.68 258.17 289.84 490.84 509.41 451.55 370 260 288 473 520 436 5 5 3 6 6 6 171400 23096 1334 22228 53822;53823;53824;53825;53826;53827;53828;53829 62481;62482;62483;62484;62485;62486;62487;62488 62483 8 YSLEYYMGLAEELVR Unmodified 1834.8811 0.881137 974 G5E8R3;E9QPD7;Q05920 Pcx;Pc Pyruvate carboxylase;Pyruvate carboxylase, mitochondrial yes no 0 0 0 0 8 0.816 1 1 1 102.58 102.58 3 4.8676E-05 36088 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 95.57 71.011 19.258 0 9.455 33.946 24.816 0 18 0 9 32 25 0 2 0 1 3 2 0 2274.9 23097 974 22229 53830;53831;53832 62489;62490;62491 62490 3 YSLSEDK Unmodified 840.38651 0.38651317 2317;1802 Q80UG2;P70207;P70208;P70206 Plxna4;Plxna2;Plxna3;Plxna1 Plexin-A4;Plexin-A2;Plexin-A3;Plexin-A1 no no 0 0 0 0 5.5 0.5 1 1 47.055 47.055 2 0.027615 14560 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 96.492 52.677 158.78 116.6 86.238 71.045 0 167.36 149 121 83 65 0 157 2 2 1 1 0 2 7827.7 23098 2317;1802 22230 53833;53834 62492;62493 62492 2 YSNFVSFPLYLNGK Deamidation (N) 1648.8137 0.81370936 2936 Q9CQN1 Trap1 Heat shock protein 75 kDa, mitochondrial yes yes 0 1 0 0 10 0 1 87.422 87.422 3 0.0024183 28153 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 57.328 26.889 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23099 2936 22231 53835 62494 62494 1027 1 YSNSALGHVNSTIK Unmodified 1489.7525 0.75250609 2886 Q99P72;Q8BH78;Q8BHF5 Rtn4 Reticulon-4;Reticulon yes no 0 0 0 0 7.5 0.5 1 1 47.328 47.328 3 0.0002898 12633 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 68.413 46.215 0 0 0 48.864 75.159 0 0 0 0 46 74 0 0 0 0 1 1 0 7123.2 23100 2886 22232 53836;53837 62495;62496 62496 2 YSNSDVIIYVGCGER Unmodified 1730.7934 0.79338463 1596 P50516 Atp6v1a V-type proton ATPase catalytic subunit A yes yes 0 0 0 0 8.8 3.49 1 1 1 2 63.271 63.271 2;3 1.5948E-10 22611 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 116.63 105.07 217.57 105.91 133.16 112.35 132.79 146.06 204 111 130 111 131 139 3 2 1 2 3 3 50837 23101 1596 22233 53838;53839;53840;53841;53842 62497;62498;62499;62500;62501 62500 5 YSNSEVVTGSGLDSQK Unmodified 1669.7795 0.7795087 2057 Q5SQX6;F6QD74 Cyfip2 Cytoplasmic FMR1-interacting protein 2 yes no 0 0 0 0 5 0.816 1 1 1 52.6 52.6 3 6.1783E-12 17164 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 122.14 90.953 29.904 27.776 87.123 84.509 160.34 0 28 28 84 84 157 0 1 1 2 2 3 0 16076 23102 2057 22234 53843;53844;53845 62502;62503;62504 62503 3 YSNSEVVTGSGR Unmodified 1254.584 0.58404378 2282 Q7TMB8;A0A0R4J119;A0A0U1RQ05 Cyfip1 Cytoplasmic FMR1-interacting protein 1 yes no 0 0 0 0 4.5 0.5 1 1 37.872 37.872 2 0.0028148 10119 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 65.179 37.355 30.044 19.729 29.112 0 39.748 0 28 19 28 0 38 0 1 1 1 0 2 0 4559.1 23103 2282 22235 53846;53847 62505;62506 62506 2 YSPDCTIIVVSNPVDILTYVTWK Unmodified 2682.3615 0.36149098 1389 P16125;D3Z7F0;A0A0N4SVV8 Ldhb L-lactate dehydrogenase B chain;L-lactate dehydrogenase yes no 0 0 0 0 10.6 1.36 1 2 1 1 107.51 107.51 3;4 7.7798E-17 33894 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 104.18 90.59 69.003 62.82 43.62 64.849 28.346 36.244 65 64 41 60 28 34 5 6 4 4 2 3 33179 23104 1389 22236 53848;53849;53850;53851;53852 62507;62508;62509;62510;62511;62512;62513;62514;62515;62516;62517 62514 11 YSPEEIAMATVTALR Unmodified 1650.8287 0.8287075 1308 P05063 Aldoc Fructose-bisphosphate aldolase C yes yes 0 0 0 0 9.14 2.59 1 1 2 1 2 87.613 87.613 2;3 2.0805E-32 31769 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 164.88 140.33 50.127 104.1 182.93 58.827 121.85 145.26 47 103 177 56 122 139 2 5 5 2 4 5 93088 23105 1308 22237 53853;53854;53855;53856;53857;53858;53859 62518;62519;62520;62521;62522;62523;62524;62525;62526 62523 9 YSQDMHCLIR Unmodified 1321.5907 0.59072584 1983 Q3UHJ0 Aak1 AP2-associated protein kinase 1 yes yes 0 0 0 0 6 0 1 47.821 47.821 3 0.056399 14305 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 38.1 21.875 109.04 80.96 0 109.4 111.08 0 102 83 0 102 111 0 1 1 0 1 1 0 3319.1 23106 1983 22238 53860 62527 62527 1 YSQFINFPIYVWSSK Unmodified 1877.9352 0.93522148 1324 P08113 Hsp90b1 Endoplasmin yes yes 0 0 0 0 12 0 1 94.829 94.829 3 1.2545E-22 27206 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 138.81 111.78 34.068 27.127 22.025 23.826 0 28 32 28 23 23 0 28 1 1 1 1 0 1 9077.3 23107 1324 22239 53861 62528;62529 62529 2 YSQVLANGLDNK Unmodified 1320.6674 0.66737948 340 F6YVP7;A0A1Y7VKY1;P62270 Gm10260;Rps18 40S ribosomal protein S18 yes no 0 0 0 0 5 0 1 60.609 60.609 3 0.063934 21061 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 33.685 11.152 0 29.792 0 41.534 0 0 0 28 0 38 0 0 0 1 0 1 0 0 2760.4 23108 340 22240 53862 62530 62530 1 YSSPANLYVR Unmodified 1168.5877 0.58767259 568 B0V2N1 Ptprs Receptor-type tyrosine-protein phosphatase S yes yes 0 0 0 0 7.5 0.5 1 1 52.213 52.213 2 0.011157 15594 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 64.841 52.485 98.994 36.124 103.04 104.52 43.886 47.784 93 37 102 102 46 46 2 1 2 2 1 1 10201 23109 568 22241 53863;53864 62531;62532 62531 2 YSSQLSQVQSLITNVESQLAEIR Unmodified 2592.3395 0.33950998 664;663 CON__Q9UE12;CON__Q15323;CON__Q14525 no no 0 0 0 0 8 1 1 1 106.52 106.52 3 4.5782E-15 37110 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 81.48 67.318 0 3.192 0 0 0 5.33 0 3 0 0 0 5 0 1 0 0 0 1 2387.4 + 23110 664;663 22242 53865;53866 62533;62534 62534 2 YSSTFLDSAWR Unmodified 1331.6146 0.61461563 2594 Q8K212 Pacs1 Phosphofurin acidic cluster sorting protein 1 yes yes 0 0 0 0 8 0 1 69.365 69.365 2 0.0023382 23012 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 80.706 52.934 0 38.443 55.302 66.965 41.676 97.949 0 37 56 65 46 93 0 1 1 1 1 1 5242.8 23111 2594 22243 53867 62535 62535 1 YSSVYGASVSDEDLK Unmodified 1618.7362 0.7362469 742 D3Z0L4;Q9D9P1;Q9CRB9;S4R238 Chchd3 MICOS complex subunit Mic19 yes no 0 0 0 0 9.5 3.5 1 1 59.843 59.843 3 7.6582E-05 20149 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 91.207 61.149 127.64 138.09 71.576 84.22 174.65 162.38 120 139 74 83 176 157 2 2 1 1 2 2 12988 23112 742 22244 53868;53869 62536;62537 62536 2 YSTDVSVDEVK Unmodified 1240.5823 0.58231244 1458 P26443 Glud1 Glutamate dehydrogenase 1, mitochondrial yes yes 0 0 0 0 5.75 2.9 1 2 2 2 1 54.894 54.894 2;3 5.0195E-20 18631 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 172.98 84.611 482.22 583.43 652.3 533.53 563.94 559.03 454 584 639 520 566 538 8 9 7 8 6 8 204220 23113 1458 22245 53870;53871;53872;53873;53874;53875;53876;53877 62538;62539;62540;62541;62542;62543;62544;62545;62546;62547 62539 10 YSTFSGFLVFPL Unmodified 1376.7016 0.70163972 2387 Q9R171;Q8BGU2 Cbln1;Cbln2 Cerebellin-1;Cerebellin;[des-Ser1]-cerebellin;Cerebellin-2 yes no 0 0 0 0 11.5 0.5 1 1 113.62 113.62 2 1.0989E-07 36370 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 110.78 57.306 10.73 0 0 10.723 16.243 0 10 0 0 10 16 0 2 0 0 1 2 0 5252.6 23114 2387 22246 53878;53879 62548;62549 62548 2 YSVDIPLDK Unmodified 1048.5441 0.54407645 1698 P61358;A2A4Q0 Rpl27 60S ribosomal protein L27 yes no 0 0 0 0 13 0 1 66.024 66.024 2 0.0085037 24094 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 70.17 21.53 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23115 1698 22247 53880 62550 62550 1 YSVLLVLTDGVVSDMAETR Unmodified 2067.0558 0.055806904 3371 Q9Z140 Cpne6 Copine-6 yes yes 0 0 0 0 10.2 1.72 1 1 1 1 1 102.89 102.89 3 1.463E-10 36457 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 113.47 100.44 83.098 3.192 47.334 13.558 0 33.924 79 3 44 13 0 33 4 1 2 2 0 2 22579 23116 3371 22248 53881;53882;53883;53884;53885 62551;62552;62553;62554;62555;62556;62557 62554 7 YSVQLLTPANLLAK Unmodified 1529.8817 0.88172935 1665 P60122 Ruvbl1 RuvB-like 1 yes yes 0 0 0 0 9.2 4.17 1 1 1 2 84.398 84.398 3;4 4.3563E-06 23455 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 106.17 82.569 39.139 182.8 109.36 144 75.159 69.29 37 176 112 139 74 65 1 3 2 3 1 2 29631 23117 1665 22249 53886;53887;53888;53889;53890 62558;62559;62560;62561;62562 62561 5 YSVQTSDHR Unmodified 1091.4996 0.49958587 2131 Q61553 Fscn1 Fascin yes yes 0 0 0 0 6 0 1 28.057 28.057 3 0.00048545 5103 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.85 70.82 0 0 0 0 27.631 48.248 0 0 0 0 28 46 0 0 0 0 1 1 6516 23118 2131 22250 53891 62563 62563 1 YSWVQLAGHTGSFK Unmodified 1579.7783 0.77832691 2629 Q8R071 Itpka Inositol-trisphosphate 3-kinase A yes yes 0 0 0 0 11 0.816 1 1 1 65.595 65.595 3 9.7571E-05 16108 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 92.063 71.4 137.95 92.327 0 120.03 134.59 153.93 129 93 0 111 139 148 2 1 0 1 2 2 34952 23119 2629 22251 53892;53893;53894 62564;62565;62566 62566 3 YSYLKPR Unmodified 925.50215 0.50215205 1889 Q06185 Atp5i ATP synthase subunit e, mitochondrial yes yes 0 0 0 1 11.5 1.5 1 1 44.035 44.035 3 0.016815 9523 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.187 60.232 1070.9 430.01 890.38 905.17 540.36 598.6 1005 486 889 886 576 576 2 2 2 2 2 2 36268 23120 1889 22252 53895;53896 62567;62568 62567 2 YSYVCPDLVK Unmodified 1242.5955 0.59546009 2836 Q99JY9 Actr3 Actin-related protein 3 yes yes 0 0 0 0 8 1 1 1 64.19 64.19 2 2.6388E-05 21150 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 125.97 77.329 129.27 56.275 47.73 36.754 44.788 87.2 121 56 46 37 46 83 2 1 1 1 1 2 16435 23121 2836 22253 53897;53898 62569;62570 62569 2 YTALDKWTNQLNSLNQAVVSK Unmodified 2392.2387 0.23867373 1692 P61202;A2AQE4 Cops2 COP9 signalosome complex subunit 2 yes no 0 0 0 1 11.5 0.5 1 1 81.129 81.129 4 1.356E-08 25086 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 74.062 53.863 0 40.432 66.465 86.758 0 39.442 0 38 65 83 0 37 0 1 1 1 0 1 12103 23122 1692 22254 53899;53900 62571;62572 62571 2 YTALVDQEEKEDVK Unmodified 1665.8097 0.8097462 3156 Q9DCX2;B1ASE2 Atp5h ATP synthase subunit d, mitochondrial yes no 0 0 0 1 5.67 0.471 1 2 56.476 56.476 3;4 0.00028013 18387 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 85.45 61.815 157.63 173.77 277.83 263.74 148.13 115.9 148 176 278 259 157 111 1 2 3 3 3 2 24221 23123 3156 22255 53901;53902;53903 62573;62574;62575 62575 3 YTAQDHSDYR Unmodified 1254.5265 0.5265289 89 A0A0G2JEU6;S4R1K5;B1AXI2;A0A0G2JE35;A0A0G2JEH1;B1AXI4;B1AXI6;Q3UTH8;A0A0G2JFA1 Arhgef9 Rho guanine nucleotide exchange factor 9 yes no 0 0 0 0 3.5 0.5 1 1 29.277 29.277 3 0.0020543 6572 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 65.842 52.657 39.564 27.124 0 80.226 34.858 58.701 37 28 0 74 37 56 1 1 0 2 1 1 3512.9 23124 89 22256 53904;53905 62576;62577 62577 2 YTAVGQLVQDLLTQVR Unmodified 1802.989 0.98904797 371 Q921Q7;A0A2C9F2A2 Rin1 Ras and Rab interactor 1 yes no 0 0 0 0 12 0 1 102.87 102.87 3 0.0069641 28906 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 42.149 30.887 9 0 0 0 0 0 9 0 0 0 0 0 1 0 0 0 0 0 2228.9 23125 371 22257 53906 62578 62578 1 YTCEQAAR Unmodified 997.42873 0.42872911 2468 Q8BW96 Camk1d Calcium/calmodulin-dependent protein kinase type 1D yes yes 0 0 0 0 9 4 1 1 29.115 29.115 2 0.04059 6058 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 67.464 40.343 58.841 9.576 29.167 18.691 17.969 39.442 55 9 28 19 18 37 1 1 1 1 1 1 8362.8 23126 2468 22258 53907;53908 62579;62580 62579 2 YTDCLQLYVNSTLK Unmodified 1716.8393 0.83927219 2583;2279 Q7M6W1;A3QM89;Q8K0T0 Rtn1 Reticulon;Reticulon-1 no no 0 0 0 0 8 0.816 1 1 1 77.481 77.481 3 2.8662E-05 26137 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.36 81.518 97.593 79.707 159.04 149 174.56 47.77 92 83 158 148 175 46 2 2 3 3 3 1 22060 23127 2279;2583 22259 53909;53910;53911 62581;62582;62583 62583 3 YTEQITNEK Unmodified 1124.535 0.53496832 2892 Q9CPP6 Ndufa5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 yes yes 0 0 0 0 4.5 0.5 1 1 46.504 46.504 2;3 0.008022 14590 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 70.942 25.629 20.022 18.097 45.981 58.468 0 0 19 19 46 56 0 0 1 1 1 1 0 0 10523 23128 2892 22260 53912;53913 62584;62585 62584 2 YTFEDAQEHIYK Unmodified 1542.6991 0.69907354 2333;11 Q80XD3;A0A0A6YW36;O54829;Q45FE2;Q45FE1;A0A0A6YVV6;A0A087WSJ9;A0A087WSH2;A0A087WPW1;F6WDS8;A0A087WQG6;A0A087WNZ9;A0A087WRP8;A0A087WPC4;A0A087WPD1;Q9Z2H2;A0A0J9YTS6 Rgs7;Rgs6 Regulator of G-protein signaling 7;Regulator of G-protein signaling 6 no no 0 0 0 0 7.25 3.34 2 1 1 56.344 56.344 3;4 0.00017653 19068 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 79.633 57.435 138.99 251.96 278.93 111.49 267.67 219.42 131 250 277 111 268 213 3 4 4 2 3 3 26726 23129 2333;11 22261 53914;53915;53916;53917 62586;62587;62588;62589 62589 4 YTFEEIQQETDIPER Unmodified 1896.8741 0.87413737 3245 Q9JLV5;E9Q4T8 Cul3 Cullin-3 yes no 0 0 0 0 3 0 1 68.555 68.555 3 0.0037148 25270 F14-169- HC_Hembras- TMT+AKTA- 17042019-2 47.545 35.854 20.346 8.2041 0 29.914 36.668 19.208 19 9 0 28 37 19 1 1 0 1 1 1 2192.1 23130 3245 22262 53918 62590 62590 1 YTFPTEQR Unmodified 1040.4927 0.49270958 3307 Q9R111;D3YU09 Gda Guanine deaminase yes no 0 0 0 0 7.75 3.11 1 1 1 1 48.003 48.003 2 0.0018294 14439 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 131.06 79.632 187.17 146.39 303.87 291.9 253.66 136.7 176 148 296 288 250 130 2 2 3 4 3 2 64368 23131 3307 22263 53919;53920;53921;53922 62591;62592;62593;62594 62592 4 YTGEDFDEDLR Unmodified 1358.5626 0.56263964 3204 Q9JHU4 Dync1h1 Cytoplasmic dynein 1 heavy chain 1 yes yes 0 0 0 0 2 0.816 1 1 1 57.021 57.021 2 3.2185E-10 19315 F13-169- HC_Hembras- TMT+AKTA- 17042019-1 140.16 93.702 44.576 27.183 87.166 41.903 19 40.508 42 28 84 42 19 38 2 2 3 2 1 2 22127 23132 3204 22264 53923;53924;53925 62595;62596;62597;62598 62596 4 YTGSPDSLR Unmodified 994.47197 0.47197413 2317 Q80UG2;P70207 Plxna4;Plxna2 Plexin-A4;Plexin-A2 yes no 0 0 0 0 5 0 1 41.118 41.118 2 0.0029309 11687 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 80.684 39.802 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23133 2317 22265 53926 62599 62599 1 YTIGLNESLLGIVAPFWFK Unmodified 2167.1718 0.17176336 1541 P42125 Eci1 Enoyl-CoA delta isomerase 1, mitochondrial yes yes 0 0 0 0 12 0 1 113.64 113.64 3 1.5626E-05 30572 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 62.658 51.891 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1044.5 23134 1541 22266 53927 62600 62600 1 YTIVVSATASDAAPLQYLAPYSGCSMGEYFR Unmodified 3387.5792 0.57916468 1881 Q03265;D3Z6F5 Atp5a1 ATP synthase subunit alpha, mitochondrial;ATP synthase subunit alpha yes no 0 0 0 0 11 2 1 1 94.229 94.229 4 2.2815E-09 33628 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 59.971 53.81 39.564 36.124 0 30.079 27.906 0 37 37 0 28 28 0 1 2 0 1 1 0 14508 23135 1881 22267 53928;53929 62601;62602;62603 62601 3 YTLGESQGYK Unmodified 1144.5401 0.5400537 1446 P24527 Lta4h Leukotriene A-4 hydrolase yes yes 0 0 0 0 7 0 1 51.308 51.308 2 3.2941E-05 15146 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 122.96 80.675 0 39.368 0 29.94 35.311 58.688 0 37 0 28 37 56 0 1 0 1 1 1 2968.7 23136 1446 22268 53930 62604 62604 1 YTLNVLEDLGEGQK Deamidation (N) 1578.7777 0.77771779 269 A0A1C7CYV0;B1AX58;Q99K51 Pls3 Plastin-3 yes no 0 1 0 0 6 0 1 80.347 80.347 3 0.017145 29555 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 47.639 18.663 39.303 26.397 44.54 77.446 41.561 87.292 37 28 46 74 46 83 1 1 1 1 1 1 2769.2 23137 269 22269 53931 62605 62605 85 1 YTMGDAPDFDR Unmodified 1286.5238 0.52375171 1347 P10649;A2AE89 Gstm1 Glutathione S-transferase Mu 1 yes no 0 0 0 0 8.5 4.5 1 1 56.154 56.154 2;3 0.00016469 19137 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 96.957 66.364 138.35 78.275 124.55 0 18.538 236.12 130 83 120 0 19 222 2 1 1 0 1 2 26697 23138 1347 22270 53932;53933 62606;62607 62607 2 YTNLSYIGEGAYGMVCSAYDNLNK Unmodified 2702.1993 0.19925303 1769 P63085 Mapk1 Mitogen-activated protein kinase 1 yes yes 0 0 0 0 8.5 0.5 1 1 88.679 88.679 3;4 4.0201E-05 31328 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 41.904 21.279 0 9.576 0 0 19.197 19.706 0 9 0 0 19 19 0 1 0 0 1 1 3021.7 23139 1769 22271 53934;53935 62608;62609 62609 2 YTNNEAYFDVVEEIDAIIDK Unmodified 2360.106 0.1059878 2650;3228 Q8R2R9;Q9JKC8;H7BWY2 Ap3m2;Ap3m1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 no no 0 0 0 0 13 0 1 108.28 108.28 3 0.0064124 44044 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 36.454 20.147 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23140 2650;3228 22272 53936 62610 62610 1 YTPNIFPHK Unmodified 1115.5764 0.57637963 2743 Q91VM9;D3Z636 Ppa2 Inorganic pyrophosphatase 2, mitochondrial yes no 0 0 0 0 9.5 0.5 1 1 56.185 56.185 3 0.0036194 16177 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 66.435 38.692 207.47 70.513 237.11 193.84 274.72 208.56 195 74 232 195 278 203 2 1 2 2 2 2 22022 23141 2743 22273 53937;53938 62611;62612 62611 2 YTPPPHHSGR Unmodified 1147.5523 0.55229014 2869 Q99LY9 Ndufs5 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5;NADH dehydrogenase [ubiquinone] iron-sulfur protein 5, N-terminally processed yes yes 0 0 0 0 6.5 0.5 1 1 20.742 20.742 3 0.00063611 3027 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 82.417 58.444 2.1092 7.3058 0 0 19.146 5.1261 2 7 0 0 19 5 1 1 0 0 2 1 1897.1 23142 2869 22274 53939;53940 62613;62614 62614 2 YTPSGQSGAAASESLFISNHAY Deamidation (N) 2258.0128 0.012756116 1309 P05064;A6ZI44 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 1 0 0 4.5 0.5 1 1 68.401 68.401 3 1.7609E-15 24579 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 93.729 78.96 0 29.792 0 30.604 28 39.442 0 28 0 28 28 37 0 1 0 1 1 1 22279 23143 1309 22275 53941;53942 62615;62616;62617 62617 372 3 YTPSGQSGAAASESLFISNHAY Unmodified 2257.0287 0.028740531 1309 P05064;A6ZI44 Aldoa Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase yes no 0 0 0 0 7.5 2.4 1 3 1 1 1 1 66.677 66.677 3 1.2726E-27 23020 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 128.67 112.85 108.72 150.56 163.15 69.66 195.18 233.78 102 149 158 66 196 224 4 6 5 2 6 7 196770 23144 1309 22275 53943;53944;53945;53946;53947;53948;53949;53950 62618;62619;62620;62621;62622;62623;62624;62625;62626;62627 62620 10 YTQQIIQGIQQLVK Unmodified 1658.9356 0.93555583 2591 Q8K1R3 Pnpt1 Polyribonucleotide nucleotidyltransferase 1, mitochondrial yes yes 0 0 0 0 11 0 1 87.337 87.337 3 0.0015769 27810 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 55.186 40.5 37 0 0 0 0 0 37 0 0 0 0 0 1 0 0 0 0 0 3557.3 23145 2591 22276 53951 62628 62628 1 YTQSNSVCYAK Unmodified 1319.5816 0.58160094 2977 Q9CWJ9 Atic Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase yes yes 0 0 0 0 7 0 1 45.359 45.359 3 0.0002583 12396 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 87.363 55.301 69.567 0 29.945 0 47.137 28.503 65 0 28 0 46 28 1 0 1 0 1 1 3677.8 23146 2977 22277 53952 62629 62629 1 YTRPTHLSCVK Unmodified 1360.6922 0.69215444 1424 P20357;G3UZV6;G3UZJ2 Map2 Microtubule-associated protein 2;Microtubule-associated protein yes no 0 0 0 1 9.5 0.5 1 1 36.57 36.57 4 0.0048424 7340 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 58.172 32.129 54.119 132.01 158.96 85.277 0 73.554 51 130 158 83 0 69 1 2 2 1 0 1 26437 23147 1424 22278 53953;53954 62630;62631 62630 2 YTRPTPVQK Unmodified 1088.5978 0.59784335 2146 Q62167;P16381;Q62095 Ddx3x;D1Pas1;Ddx3y ATP-dependent RNA helicase DDX3X;Putative ATP-dependent RNA helicase Pl10;ATP-dependent RNA helicase DDX3Y yes no 0 0 0 1 9 0 1 36.302 36.302 3 0.034829 7304 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 54.608 0.19955 0 194.1 163.76 118.63 147.22 153.57 0 185 167 120 151 148 0 1 1 1 1 1 8314.9 23148 2146 22279 53955 62632 62632 1 YTSALTHDAILVIAEAFR Unmodified 1990.0524 0.052376507 565 B0QZW1;F2Z488 Gria3 no no 0 0 0 0 9 0 1 95.626 95.626 3 0.011857 34141 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 37.552 9.5826 0 0 9.738 0 9.414 0 0 0 9 0 9 0 0 0 1 0 1 0 1976.3 23149 565 22280 53956 62633 62633 1 YTSALTYDGVK Unmodified 1216.5976 0.59756858 2286 Q7TNB5;P23818;F6YNQ1 Gria1 Glutamate receptor 1 yes no 0 0 0 0 6.5 0.5 1 1 59.073 59.073 2 3.8182E-06 18828 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.752 54.598 20.192 18.569 17.099 50.352 0 0 19 19 19 47 0 0 1 1 1 1 0 0 1947.8 23150 2286 22281 53957;53958 62634;62635 62635 2 YTSLLADK Unmodified 909.48075 0.48074791 462 A2AGI2;Q8BYM5;A2AGI0;A2AGI3 Nlgn3 Neuroligin-3 yes no 0 0 0 0 9 0 1 61.306 61.306 3 0.034932 18508 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 51.066 27.509 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23151 462 22282 53959 62636 62636 1 YTSQIVGR Unmodified 922.48723 0.48723027 1269 O88543;F6YCA7 Cops3 COP9 signalosome complex subunit 3 yes no 0 0 0 0 7 0 1 42.206 42.206 2 0.026352 10825 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 74.486 42.551 48.903 35.291 46.607 17.989 0 79.95 46 37 46 19 0 75 1 1 1 1 0 1 6880 23152 1269 22283 53960 62637 62637 1 YTTNAPGGFR Unmodified 1082.5145 0.51450765 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 8.67 3.09 1 1 1 43.641 43.641 2 0.00011613 11566 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 103.19 66.034 0 118.58 35.247 28.008 62.371 126.14 0 112 37 28 65 120 0 2 1 1 2 2 9702 23153 894 22284 53961;53962;53963 62638;62639;62640 62639 3 YTTPAGEVR Unmodified 992.49271 0.49270958 1899 Q11011;F6QYF8;E9Q039;E9Q6F4 Npepps Puromycin-sensitive aminopeptidase yes no 0 0 0 0 9 4 1 1 39.292 39.292 2 0.0011207 10797 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 88.921 38.023 88.289 0 129.39 0 154.81 0 83 0 120 0 148 0 1 0 1 0 1 0 14501 23154 1899 22285 53964;53965 62641;62642 62642 2 YTVFHDLIR Unmodified 1162.6135 0.61349341 171 A0A0R4J0F6;Q99KY4 Gak Cyclin-G-associated kinase yes no 0 0 0 0 9 0 1 61.144 61.144 3 0.00084327 18384 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 87.258 63.701 29.807 46.934 0 30.604 0 59.696 28 46 0 28 0 56 1 1 0 1 0 1 5164.9 23155 171 22286 53966 62643 62643 1 YTVPLPSPVQDSENLSGESGSFYEGTDDK Unmodified 3117.3938 0.39384956 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 0 4.8 0.748 2 2 1 78.273 78.273 3;4 7.6374E-26 29256 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 79.875 73.299 30.044 20.216 19.685 99.639 0 97.884 28 19 19 93 0 93 1 1 1 4 0 3 25351 23156 1424 22287 53967;53968;53969;53970;53971 62644;62645;62646;62647;62648 62646 5 YTVPLPSPVQDSENLSGESGSFYEGTDDKVR Unmodified 3372.5634 0.5633745 1424 P20357 Map2 Microtubule-associated protein 2 yes yes 0 0 0 1 5 0 1 72.773 72.773 4 0.0010615 26602 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 35.147 17.353 50.25 35.98 0 29.558 55.589 47.45 47 37 0 28 56 46 1 1 0 1 1 1 7526.5 23157 1424 22288 53972 62649 62649 1 YTVQDESHSEWVSCVR Unmodified 1980.8636 0.86358946 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 4.5 0.5 1 1 52.054 52.054 3 2.6097E-38 17282 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 157.98 141.56 39.184 50.288 79.764 56.112 18.175 63.441 37 51 79 56 19 60 1 2 2 2 1 2 10913 23158 1792 22289 53973;53974 62650;62651 62650 2 YTVYCSLIK Unmodified 1145.5791 0.57908174 2833 Q99JX4 Eif3m Eukaryotic translation initiation factor 3 subunit M yes yes 0 0 0 0 11 0 1 66.718 66.718 3 0.02355 18567 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 47.938 21.819 69.387 0 60.242 0 66.371 47.142 65 0 56 0 65 46 1 0 1 0 1 1 3757.7 23159 2833 22290 53975 62652 62652 1 YTWSDVGQLVEK Unmodified 1423.6983 0.69834526 1028 F8VPN4;A0A0G2JGI9;E0CYU6 Agl yes no 0 0 0 0 8 0 1 75.376 75.376 3 0.015366 25847 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 43.991 23.328 29.904 27.776 0 39.196 66.189 0 28 28 0 37 65 0 1 1 0 1 1 0 2289.3 23160 1028 22291 53976 62653 62653 1 YVAAAFPSACGK Unmodified 1240.591 0.59104341 172 A0A0R4J0G0;Q8BH04;A0A2I3BQL9;A0A2I3BS39;A0A2I3BRX1 Pck2 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial yes no 0 0 0 0 9 0 1 59.683 59.683 3 0.00059709 17702 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 64.439 40.689 59.485 54.654 54.966 45.94 56.466 0 56 56 56 46 56 0 1 1 1 1 1 0 11137 23161 172 22292 53977 62654 62654 1 YVAAALAVMR Unmodified 1063.5848 0.58483582 89 A0A0G2JEU6;S4R1K5;B1AXI2;A0A0G2JE35;A0A0G2JEH1;B1AXI4;B1AXI6;Q3UTH8;A0A0G2JFA1 Arhgef9 Rho guanine nucleotide exchange factor 9 yes no 0 0 0 0 6.5 5.5 1 1 70.31 70.31 2 9.0158E-05 23903 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 105.04 75.467 69.495 64.092 22.859 25.963 51.2 89.149 65 65 23 25 51 85 1 2 1 1 1 2 11026 23162 89 22293 53978;53979 62655;62656 62655 2 YVAAMVLSAAGDTLGYFNGK Deamidation (N) 2047.9925 0.99247837 1625 P54923 Adprh [Protein ADP-ribosylarginine] hydrolase yes yes 0 1 0 0 11.3 0.471 2 1 102.52 102.52 3 1.1038E-10 34642 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 80.545 54.336 20.292 18.848 0 9.6092 12.111 0 19 19 0 9 12 0 1 1 0 1 1 0 7849.2 23163 1625 22294 53980;53981;53982 62657;62658;62659 62658 624 3 YVALTSLLK Unmodified 1006.6063 0.60628277 1436 Q8CBB7;P22892 Ap1g1 AP-1 complex subunit gamma-1 yes no 0 0 0 0 6.5 5.5 1 1 78.588 78.588 2 3.9957E-18 21134 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 185.84 115.57 251.49 302.18 131.31 174.76 325.22 432.04 236 302 129 165 329 414 3 5 2 3 4 5 27808 23164 1436 22295 53983;53984 62660;62661;62662;62663;62664 62662 5 YVANLFPYK Unmodified 1113.5859 0.58588168 3085 Q9D819 Ppa1 Inorganic pyrophosphatase yes yes 0 0 0 0 11 0.707 1 2 1 72.769 72.769 2;3 7.2933E-06 21225 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 154.31 96.749 256.91 454.01 150.5 175.95 522.5 579.92 241 440 149 167 516 558 3 5 3 3 4 6 118140 23165 3085 22296 53985;53986;53987;53988 62665;62666;62667;62668;62669;62670 62667 6 YVASYLLAALGGNSSPSAK Deamidation (N) 1868.952 0.95199376 1865 P99027 Rplp2 60S acidic ribosomal protein P2 yes yes 0 1 0 0 3.75 4.76 3 1 93.192 93.192 3 5.0539E-19 32714 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 126.84 102.36 63.377 27.08 93.072 78.378 32.426 39.442 60 26 91 75 31 37 3 2 4 2 2 1 19869 23166 1865 22297 53989;53990;53991;53992 62671;62672;62673;62674;62675;62676 62672 756 6 YVCYGGL Unmodified 830.36328 0.36327531 2469 Q8BWF0 Aldh5a1 Succinate-semialdehyde dehydrogenase, mitochondrial yes yes 0 0 0 0 7 0.816 1 1 1 67.33 67.33 2 0.02877 22004 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 87.265 73.49 59.352 132.44 112.35 49.854 94.332 145.48 56 130 111 47 93 139 1 3 2 2 1 3 25210 23167 2469 22298 53993;53994;53995 62677;62678;62679 62679 3 YVDIAIPCNNK Unmodified 1305.6387 0.63872189 1374 P14206;A0A1L1SRW0 Rpsa 40S ribosomal protein SA yes no 0 0 0 0 7.5 0.5 1 1 64.256 64.256 3 0.00051138 21131 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 78.655 52.996 49.176 36.052 0 38.842 85.034 0 46 37 0 37 83 0 1 1 0 1 1 0 12446 23168 1374 22299 53996;53997 62680;62681 62680 2 YVDLGGSYVGPTQNR Unmodified 1624.7845 0.7845345 2467 Q8BW75;E9Q3X6;E9PVL9 Maob Amine oxidase [flavin-containing] B yes no 0 0 0 0 7 0 1 59.164 59.164 3 0.021332 18876 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.613 18.232 0 58.839 44.559 37.785 0 69.29 0 56 46 37 0 65 0 1 1 1 0 1 3172.6 23169 2467 22300 53998 62682 62682 1 YVDLMESSIAQSIHR Unmodified 1747.8563 0.85631924 2301 Q80TJ1;K4DI76;J3QJW3;A0A286YE00 Cadps Calcium-dependent secretion activator 1 yes no 0 0 0 0 7.5 0.5 1 1 71.135 71.135 3 2.0835E-05 24448 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 81.128 28.09 29.411 36.118 75.776 44.375 73.754 46.931 28 37 74 46 74 46 1 1 1 1 1 1 6386.5 23170 2301 22301 53999;54000 62683;62684 62683 2 YVDMSAK Unmodified 812.37384 0.37383999 3110 Q9DB20;A0A338P7G3 Atp5o ATP synthase subunit O, mitochondrial yes no 0 0 0 0 7.5 0.5 1 1 50.032 50.032 2 0.022445 13839 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 104.21 41.494 297.16 225.75 0 247.32 332.37 164.06 278 231 0 232 334 158 2 2 0 2 2 1 30701 23171 3110 22302 54001;54002 62685;62686 62686 2 YVDWPTFLR Unmodified 1195.6026 0.60259438 2303 Q80TL4;S4R1R0 Kiaa1045;N28178 Protein KIAA1045 yes no 0 0 0 0 11 2 1 1 80.908 80.908 2 0.0014762 27771 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 101.64 59.751 150.52 153.71 0 132.17 275.8 76.744 141 154 0 124 272 74 3 3 0 2 3 1 31423 23172 2303 22303 54003;54004 62687;62688;62689 62687 3 YVECSALTQK Unmodified 1197.57 0.56997362 1676 P60766 Cdc42 Cell division control protein 42 homolog yes yes 0 0 0 0 6.33 0.471 2 1 52.965 52.965 2;3 2.0823E-05 15914 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 127.76 83.012 89.22 121.6 67.402 19.898 199.09 84.967 84 121 65 19 194 84 2 3 1 1 3 2 16534 23173 1676 22304 54005;54006;54007 62690;62691;62692 62692 3 YVEDTDGSSPEDLMAVLTGAEEK Unmodified 2455.0948 0.094830765 3192 Q9ES97 Rtn3 Reticulon-3 yes yes 0 0 0 0 4 0 1 92.234 92.234 4 3.791E-12 34037 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 75.064 62.401 0 4.1918 3.8433 5.2359 0 5.33 0 4 4 5 0 5 0 1 1 1 0 1 610.63 23174 3192 22305 54008 62693 62693 1 YVEELEALFPDLPK Unmodified 1661.8552 0.85523983 2415 Q8BIW1 Prune Protein prune homolog yes yes 0 0 0 0 7 0 1 97.851 97.851 3 0.0011473 35953 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 60.628 46.949 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23175 2415 22306 54009 62694 62694 1 YVEHEERPK Unmodified 1185.5778 0.57783619 1581 P48722 Hspa4l Heat shock 70 kDa protein 4L yes yes 0 0 0 1 8.5 4.5 1 1 30.397 30.397 4 0.0017743 7639 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 82.287 57.495 108.98 177.91 120.16 243.11 175.56 113.32 102 176 120 232 176 111 1 2 1 2 1 1 19295 23176 1581 22307 54010;54011 62695;62696 62695 2 YVEPIEDVPCGNIVGLVGVDQFLVK Unmodified 2758.4252 0.42515387 1652 P58252 Eef2 Elongation factor 2 yes yes 0 0 0 0 8.4 2.42 1 1 2 1 98.475 98.475 3;4 3.9928E-08 35289 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 60.133 46.945 35.768 47.614 23.143 19.129 47.639 0 34 47 23 19 47 0 3 3 1 1 3 0 14379 23177 1652 22308 54012;54013;54014;54015;54016 62697;62698;62699;62700;62701 62699 5 YVEQLLTLFNR Unmodified 1394.7558 0.75580056 823 E9PV12;G3X914;Q9D5V5;E9Q6Z0 Cul5 Cullin-5 yes no 0 0 0 0 11 0 1 93.496 93.496 2 0.0038344 30147 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 69.721 23.295 0 65 0 0 0 0 0 65 0 0 0 0 0 1 0 0 0 0 4705.5 23178 823 22309 54017 62702 62702 1 YVFQGPYGPR Unmodified 1182.5822 0.58219329 1204 O35668 Hap1 Huntingtin-associated protein 1 yes yes 0 0 0 0 10 0 1 58.658 58.658 2 0.0027474 15465 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 84.568 55.419 20.195 38.006 0 29.546 56.249 28.243 19 37 0 28 56 28 1 1 0 1 1 1 4165.7 23179 1204 22310 54018 62703 62703 1 YVGEGAR Unmodified 750.36605 0.3660525 1555 Q8BVQ9;P46471 Psmc2 26S protease regulatory subunit 7 yes no 0 0 0 0 5 0 1 31.084 31.084 2 0.011792 6877 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 119.22 72.455 48.842 0 86.701 64.166 91.015 96.541 46 0 83 65 93 93 1 0 1 1 1 1 5954.3 23180 1555 22311 54019 62704 62704 1 YVGESEANIR Unmodified 1136.5462 0.54620171 1554 P46460 Nsf Vesicle-fusing ATPase yes yes 0 0 0 0 6.25 3.96 1 1 1 1 42.623 42.623 2 2.0999E-49 12777 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 215.14 129.92 510.13 336.87 784.06 663.08 287.09 702.83 479 334 773 650 294 667 3 3 5 4 2 4 372500 23181 1554 22312 54020;54021;54022;54023 62705;62706;62707;62708;62709 62706 5 YVGETDFAK Unmodified 1028.4815 0.48147619 3358 Q9Z0H8 Clip2 CAP-Gly domain-containing linker protein 2 yes yes 0 0 0 0 5 0 1 55.957 55.957 2 0.012515 18842 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 72.23 37.977 0 0 38.389 36.93 65.003 37.587 0 0 37 37 65 37 0 0 1 1 1 1 1926.7 23182 3358 22313 54024 62710 62710 1 YVGFGNTVPPQKR Unmodified 1461.7728 0.7728476 3453 V9GWV1;V9GXM1;Q3TGS9;Q9EPJ9 Arfgap1 ADP-ribosylation factor GTPase-activating protein 1 yes no 0 0 0 1 10.5 0.5 1 1 50.11 50.11 3 0.00034833 11863 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 73.466 51.909 39.701 24.472 0 29.923 80.123 33.079 37 23 0 28 79 32 1 1 0 1 2 1 6907.5 23183 3453 22314 54025;54026 62711;62712;62713 62711 3 YVGGTNDK Unmodified 852.39775 0.39774656 241 A0A140T8J4;Q9R257 Hebp1 Heme-binding protein 1 yes no 0 0 0 0 8.67 3.09 1 1 1 38.202 38.202 2 0.0054548 10397 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 113.26 53.615 296.36 197.92 156.58 268.74 324.76 326.52 278 204 157 260 333 315 3 2 2 3 3 3 28210 23184 241 22315 54027;54028;54029 62714;62715;62716 62716 3 YVGKEPSGLR Unmodified 1104.5928 0.59275797 789 D3Z7P3;D3Z7P4 Gls Glutaminase kidney isoform, mitochondrial yes no 0 0 0 1 9 0 1 41.843 41.843 3 0.0005522 9554 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 93.843 59.886 133.26 0 145.67 91.039 102.51 0 125 0 139 93 102 0 1 0 1 1 1 0 14716 23185 789 22316 54030 62717 62717 1 YVHLFPK Unmodified 902.50142 0.50142377 2216 Q6P4T2 Snrnp200 U5 small nuclear ribonucleoprotein 200 kDa helicase yes yes 0 0 0 0 11 0 1 55.732 55.732 3 0.020269 13876 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.866 37.904 0 0 0 0 219.56 185.61 0 0 0 0 216 180 0 0 0 0 1 1 11790 23186 2216 22317 54031 62718 62718 1 YVHPLTEEAIEEMER Unmodified 1844.8615 0.86146419 1433 Q544X6;P22315 Fech Ferrochelatase;Ferrochelatase, mitochondrial yes no 0 0 0 0 4 0 1 64.462 64.462 3 0.0043485 22856 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 46.319 30.181 0 0 0 0 0 28 0 0 0 0 0 28 0 0 0 0 0 1 3131.7 23187 1433 22318 54032 62719 62719 1 YVIESSGHAELAR Unmodified 1430.7154 0.7153923 894 E9Q3E2;Q8CC35 Synpo Synaptopodin yes no 0 0 0 0 5 0 1 44.299 44.299 3 2.6584E-07 13195 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 107.53 84.303 29.689 0 59.714 16.342 46.056 38.128 28 0 56 19 46 37 1 0 1 1 1 1 3995.1 23188 894 22319 54033 62720 62720 1 YVIHTVGPIAVGQPTASQAAELR Unmodified 2377.2754 0.27539358 2802 Q922B1 Macrod1 O-acetyl-ADP-ribose deacetylase MACROD1 yes yes 0 0 0 0 8.5 0.5 1 1 63.012 63.012 3 4.0134E-17 20016 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 105.57 98.213 24.679 0 0 9.837 0 9.594 23 0 0 9 0 9 2 0 0 1 0 1 12175 23189 2802 22320 54034;54035 62721;62722 62721 2 YVISAIPPALGMK Unmodified 1358.7632 0.76319412 2467 Q8BW75 Maob Amine oxidase [flavin-containing] B yes yes 0 0 0 0 11.5 0.5 1 1 79.451 79.451 2;3 0.00074598 21626 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 64.224 44.62 0 38.922 26.692 28.487 27.979 0 0 37 28 28 28 0 0 1 1 1 1 0 5870 23190 2467 22321 54036;54037 62723;62724 62724 2 YVISAIPPVLTAK Unmodified 1370.8173 0.81733818 2168 Q64133 Maoa Amine oxidase [flavin-containing] A yes yes 0 0 0 0 11.5 1.12 1 1 1 1 80.563 80.563 2;3 1.4303E-06 21954 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 107.06 75.683 39.342 0 127.96 27.005 64.726 58.918 37 0 121 28 65 56 1 0 3 1 2 1 44477 23191 2168 22322 54038;54039;54040;54041 62725;62726;62727;62728 62727 4 YVLINWVGEDVPDAR Unmodified 1744.8784 0.87843489 3267 Q9QXS6;A0A0R4J1E3;F7CPL2 Dbn1 Drebrin yes no 0 0 0 0 9.25 2.28 1 1 1 1 82.786 82.786 3 3.9854E-08 30040 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 114.64 84.952 178.15 157.37 115.85 126.91 97.36 204.03 167 158 112 120 102 194 3 4 2 2 2 3 73532 23192 3267 22323 54042;54043;54044;54045 62729;62730;62731;62732;62733 62729 5 YVLLSIWEGCDPVNR Unmodified 1819.8927 0.89270474 3259 Q9QUR6 Prep Prolyl endopeptidase yes yes 0 0 0 0 10.5 0.5 1 1 88.722 88.722 2;3 7.6924E-06 28697 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 79.466 63.213 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 3154.1 23193 3259 22324 54046;54047 62734;62735 62734 2 YVLPAILNPR Unmodified 1154.6812 0.68117905 2378 Q8BGF0;D3Z518 AW551984 yes no 0 0 0 0 11.5 0.5 1 1 73.495 73.495 2 0.0010543 21663 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 92.925 34.347 49.358 48.944 0 68.547 180.95 0 46 46 0 65 176 0 1 1 0 1 2 0 12518 23194 2378 22325 54048;54049 62736;62737 62736 2 YVLQQLSNWQDAHSK Unmodified 1815.8904 0.89039656 1204 O35668 Hap1 Huntingtin-associated protein 1 yes yes 0 0 0 0 10.5 0.5 1 1 68.002 68.002 3 5.5771E-05 19528 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 94.461 63.463 0 0 69.213 25.081 74.311 56.51 0 0 65 28 74 55 0 0 1 1 1 1 3174.4 23195 1204 22326 54050;54051 62738;62739 62738 2 YVMTTTTLER Unmodified 1213.6013 0.60127375 2269 Q6ZWX6 Eif2s1 Eukaryotic translation initiation factor 2 subunit 1 yes yes 0 0 0 0 7 0 1 53.769 53.769 2 0.010771 16284 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 65.404 36.317 29.904 27.776 0 20.252 27.359 29.067 28 28 0 19 28 28 1 1 0 1 1 1 1999.9 23196 2269 22327 54052 62740 62740 1 YVNSIWDLLK Unmodified 1249.6707 0.67067394 3245 Q9JLV5;F6ZZK0;F6R0N8 Cul3 Cullin-3 yes no 0 0 0 0 11.3 1.25 1 1 1 91.757 91.757 2;3 0.00060976 29885 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 83 47.041 0 19.892 28.201 20.24 0 37 0 19 28 19 0 37 0 1 2 1 0 1 7097.1 23197 3245 22328 54053;54054;54055 62741;62742;62743 62741 3 YVPQQDALEDR Unmodified 1332.631 0.63099397 1030 F8VPU2;E9Q805 Farp1 FERM, RhoGEF and pleckstrin domain-containing protein 1 yes no 0 0 0 0 4 0 1 49.241 49.241 2 0.029982 16017 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 52.725 23.252 0 20.216 0 20.767 0 39.442 0 19 0 19 0 37 0 1 0 1 0 1 5900.5 23198 1030 22329 54056 62744 62744 1 YVPTAGK Unmodified 734.39629 0.39629 1553;223 A0A0R4J2C2;P46097;P46096;Q9R0N5 Syt2;Syt1;Syt5 Synaptotagmin-2;Synaptotagmin-1;Synaptotagmin-5 no no 0 0 0 0 9.25 2.28 1 1 1 1 44.692 44.692 2 0.01082 10770 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 121.29 41.839 1772 1437.1 1404 1799.7 1620.8 2052.7 1666 1485 1418 1751 1696 1969 5 5 3 5 5 5 348160 23199 223;1553 22330 54057;54058;54059;54060 62745;62746;62747;62748;62749 62748 5 YVPTAGKLTVVILEAK Unmodified 1701.0077 0.0076581454 1553 P46096 Syt1 Synaptotagmin-1 yes yes 0 0 0 1 11 0 1 79.488 79.488 3 0.0035488 24445 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 51.235 4.5343 0 69.16 0 50.278 0 59.696 0 65 0 46 0 56 0 1 0 1 0 1 5372.8 23200 1553 22331 54061 62750 62750 1 YVPTPFVPYAVQELK Unmodified 1749.9342 0.93415885 2513 Q8CAA7;E0CX81 Pgm2l1 Glucose 1,6-bisphosphate synthase yes no 0 0 0 0 10 1.63 1 2 1 1 1 85.22 85.22 3;4 3.7189E-17 29666 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 130.24 99.753 108.79 270.48 45.032 179.07 99.306 235.42 102 260 46 168 102 223 2 4 1 4 2 4 59808 23201 2513 22332 54062;54063;54064;54065;54066;54067 62751;62752;62753;62754;62755;62756;62757;62758 62752 8 YVQELPLETDGALR Unmodified 1602.8253 0.82533668 2841 Q99KC8 Vwa5a von Willebrand factor A domain-containing protein 5A yes yes 0 0 0 0 4 0 1 69.282 69.282 2 0.0053386 25043 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 60.161 32.149 0 20.216 0 9.4841 18.761 19.719 0 19 0 9 19 19 0 1 0 1 1 1 1480.2 23202 2841 22333 54068 62759 62759 1 YVQLPADEVDTQLLQDAAR Unmodified 2144.075 0.074962442 1214 O35901;O35900 Lsm2 U6 snRNA-associated Sm-like protein LSm2 yes no 0 0 0 0 4.5 0.5 1 1 78.681 78.681 3 6.7881E-08 29378 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 83.423 65.506 89.747 43.492 27.788 49.366 18.56 0 84 47 28 47 19 0 2 2 1 2 1 0 8691.9 23203 1214 22334 54069;54070 62760;62761 62760 2 YVRPFLNSISK Unmodified 1322.7347 0.73467118 2369 Q8BG32;G3UYI4;G3UYL3;G3UYL8;G3UX15 Psmd11 26S proteasome non-ATPase regulatory subunit 11 yes no 0 0 0 1 11.7 0.471 1 2 59.977 59.977 3;4 0.00087477 14218 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 76.228 49.63 297.14 308.63 473.31 292.95 310.75 245.1 281 309 468 291 318 236 3 2 3 2 2 1 44741 23204 2369 22335 54071;54072;54073 62762;62763;62764 62764 3 YVRPGGGFEPNFTLFEK Unmodified 1956.9734 0.9733979 54 A0A0A6YY34;A0A0A6YVV2;P11352 Gpx1 Glutathione peroxidase;Glutathione peroxidase 1 yes no 0 0 0 1 9 0 1 73.745 73.745 3 0.053016 24462 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 36.451 7.1105 39.284 0 70.132 0 66.005 57.813 37 0 65 0 65 56 1 0 1 0 1 1 6704.3 23205 54 22336 54074 62765 62765 1 YVSEVVIGAPYSVTAELLNHFK Unmodified 2435.2737 0.27366225 441 A2ABY3;Q922E4 Pcyt2 Ethanolamine-phosphate cytidylyltransferase yes no 0 0 0 0 9 0 1 93.929 93.929 3 0.00027827 33550 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 45.047 15.411 5.365 0 0 0 0 9.594 5 0 0 0 0 9 1 0 0 0 0 1 764.74 23206 441 22337 54075 62766 62766 1 YVSHGATGK Unmodified 918.45593 0.45593014 1393 P16460 Ass1 Argininosuccinate synthase yes yes 0 0 0 0 8 1 1 1 30.625 30.625 3 0.0013774 5686 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 79.148 32.778 196.82 125.44 231.1 134.64 291.93 44.772 185 134 227 139 285 42 1 2 2 1 1 1 14425 23207 1393 22338 54076;54077 62767;62768 62767 2 YVSLHVR Unmodified 872.48684 0.48683634 593 B1AUY9;B1AUZ1;Q9CQX6;B1AUY8;Q3V4D5;B1AUY7;Q3UX61;Q9QY36 Naa10;Gm16286;Naa11 N-alpha-acetyltransferase 11;N-alpha-acetyltransferase 10 yes no 0 0 0 0 9 0 1 41.335 41.335 3 0.038523 9351 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.351 34.546 69.032 0 119.75 0 83.165 106.36 65 0 111 0 83 102 1 0 1 0 1 1 6317.4 23208 593 22339 54078 62769 62769 1 YVTLIYTNYENGK Deamidation (N) 1577.7613 0.76133944 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 1 0 0 9.4 1.96 3 1 1 72.635 72.635 2;3;4 8.3487E-14 24544 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 136.49 105.42 119.13 369.87 113.66 57.129 308.32 197.21 112 354 112 56 296 185 3 5 3 2 3 2 53531 23209 1414 22340 54079;54080;54081;54082;54083 62770;62771;62772;62773;62774;62775 62771 516 6 YVTLIYTNYENGK Unmodified 1576.7773 0.77732386 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 0 0 0 10 2.16 1 1 1 73.115 73.115 2;3 0.00016081 26472 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 69.352 37.826 60.088 0 0 68.602 129.88 85.838 56 0 0 65 130 84 1 0 0 2 2 2 7080 23210 1414 22340 54084;54085;54086 62776;62777;62778 62778 3 YVTLIYTNYENGKNDYVK Deamidation (N) 2197.0579 0.057915395 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 1 0 1 9.17 1.77 3 2 1 70.979 70.979 3;4 3.2408E-13 23688 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 122.31 105.16 255.64 295.1 360 347.93 442.98 491.84 240 288 362 343 449 472 3 3 4 4 5 5 57075 23211 1414 22341 54087;54088;54089;54090;54091;54092 62779;62780;62781;62782;62783;62784 62779 516 6 YVTLIYTNYENGKNDYVK Unmodified 2196.0739 0.07389981 1414 P19157 Gstp1 Glutathione S-transferase P 1 yes yes 0 0 0 1 13 0 1 70.214 70.214 4 0.0020392 26165 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 45.704 28.335 138.94 108.74 0 0 169.76 143.33 130 111 0 0 167 139 1 1 0 0 1 1 8779.7 23212 1414 22341 54093 62785 62785 1 YVTTLLYKPI Unmodified 1209.7009 0.70091144 2232 Q9R078;Q6PAM0 Prkab1;Prkab2 5'-AMP-activated protein kinase subunit beta-1;5'-AMP-activated protein kinase subunit beta-2 yes no 0 0 0 1 11 0 1 79.045 79.045 3 0.0079086 24176 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 64.297 47.964 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23213 2232 22342 54094 62786 62786 1 YVTVQNTVR Unmodified 1078.5771 0.57710791 3305 Q9R0X4;Q32MW3 Acot9;Acot10 Acyl-coenzyme A thioesterase 9, mitochondrial;Acyl-coenzyme A thioesterase 10, mitochondrial yes no 0 0 0 0 7 0 1 44.42 44.42 2 0.0081461 11940 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 77.732 46.428 39.564 27.124 0 20.767 0 0 37 28 0 19 0 0 1 1 0 1 0 0 2745.4 23214 3305 22343 54095 62787 62787 1 YVVGLIIK Unmodified 903.57934 0.57933974 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 12 0 1 75.277 75.277 2 0.0045085 19842 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 117.7 17.632 0 78.736 0 71.045 0 0 0 74 0 65 0 0 0 1 0 1 0 0 5285.8 23215 2222 22344 54096 62788 62788 1 YVVGQTPVYVPYEIR Unmodified 1781.9352 0.93522148 2354;20 A0A087WPX3;A0A087WR56;A0A087WNW2;E9Q171;E9PW06;Q810U3 Nfasc Neurofascin no no 0 0 0 0 9.33 2.62 1 1 1 73.137 73.137 2;3 0.00018764 27478 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 71.241 48.005 188.89 204.32 0 141.22 131.07 85.804 177 204 0 130 129 84 3 3 0 2 2 2 32377 23216 20;2354 22345 54097;54098;54099 62789;62790;62791 62791 3 YVVISQGLDKPR Unmodified 1373.7667 0.76669959 175 A0A0R4J0I9;Q91ZX7 Lrp1 Prolow-density lipoprotein receptor-related protein 1;Low-density lipoprotein receptor-related protein 1 85 kDa subunit;Low-density lipoprotein receptor-related protein 1 515 kDa subunit;Low-density lipoprotein receptor-related protein 1 intracellular domain yes no 0 0 0 1 10 0 1 55.648 55.648 3 7.2518E-05 14094 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 92.781 63.44 78.804 42.553 64.446 65.861 71.41 86.44 74 46 65 65 74 83 1 1 1 1 1 1 13646 23217 175 22346 54100 62792 62792 1 YVVNHLGR Unmodified 956.5192 0.5191991 141 A0A0R3P9C8;Q9DC69 Ndufa9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial yes no 0 0 0 0 11 2 1 1 37.772 37.772 3 0.0007726 8034 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 120.62 95.484 157.46 55.401 179.24 158.8 112.38 69.29 148 56 176 157 111 65 2 1 2 2 1 1 19287 23218 141 22347 54101;54102 62793;62794 62793 2 YVVVSTPEK Unmodified 1020.5492 0.54916182 1147 J3QP71;K3W4Q8;P18572 Bsg Basigin yes no 0 0 0 0 10.5 2.5 1 1 53.762 53.762 2;3 0.014913 15761 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 69.598 26.777 39.295 201.35 208.45 0 168.37 183.65 37 195 204 0 167 176 1 2 2 0 2 1 17531 23219 1147 22348 54103;54104 62795;62796 62795 2 YVWAATAGGVFQSITPVEIDMIVGK Unmodified 2651.3669 0.36691071 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 0 0 0 11.1 1.25 1 1 2 2 1 105.51 105.51 3;4 1.5749E-20 34841 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 86.557 73.237 8.3919 37.721 13.989 45.022 77.657 0 8 37 14 44 76 0 2 3 2 3 4 0 20715 23220 3220 22349 54105;54106;54107;54108;54109;54110;54111 62797;62798;62799;62800;62801;62802;62803;62804;62805 62801 9 YVWAATAGGVFQSITPVEIDMIVGK Oxidation (M) 2667.3618 0.36182533 3220 Q9JJV2;D3YWS3 Pfn2 Profilin-2;Profilin yes no 0 0 1 0 10 0 1 101.26 101.26 4 4.7714E-07 32781 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 52.909 31.904 12 0 0 0 0 0 12 0 0 0 0 0 1 0 0 0 0 0 1720.2 23221 3220 22349 54112 62806 62806 199 1 YVWLVYEQEQPLSCDEPILSNK Unmodified 2709.2996 0.299619 1806 P70296;D3Z1V4 Pebp1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide yes no 0 0 0 0 8.56 2.54 2 2 2 1 2 88.492 88.492 3;4 6.4866E-16 32678 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.725 73.025 145.16 126.73 39.883 40.441 291.96 163.91 136 126 37 37 287 156 6 4 3 1 5 4 164180 23222 1806 22350 54113;54114;54115;54116;54117;54118;54119;54120;54121 62807;62808;62809;62810;62811;62812;62813;62814;62815;62816;62817;62818 62809 12 YVYDSAFHPDTGEK Unmodified 1627.7155 0.71545188 2730 Q91V61;Q3U4F0 Sfxn3 Sideroflexin-3 yes no 0 0 0 0 5.5 0.5 1 1 54.546 54.546 3 2.4634E-07 18126 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 109.44 90.609 118.04 98.996 94.079 115.61 63.87 96.249 111 102 93 112 65 92 2 2 1 2 1 2 19845 23223 2730 22351 54122;54123 62819;62820 62819 2 YVYSVLDDVIPEEILGK Unmodified 1951.019 0.019010693 1567 P47809 Map2k4 Dual specificity mitogen-activated protein kinase kinase 4 yes yes 0 0 0 0 7 0 2 99.264 99.264 3;4 0.00017453 36281 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 58.671 49.507 50.352 4.5167 9.4187 20.767 0 14.924 47 5 9 19 0 14 2 1 1 1 0 1 2609.8 23224 1567 22352 54124;54125 62821;62822 62821 2 YWAGHDK Unmodified 875.3926 0.3926016 1362 P12960 Cntn1 Contactin-1 yes yes 0 0 0 0 7 0 1 40.011 40.011 3 0.0042542 9843 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 105.12 55.077 177.56 142.93 153.51 178.92 228.56 171.5 167 148 158 176 232 167 1 1 1 1 1 1 8330.3 23225 1362 22353 54126 62823 62823 1 YWEAFLPEAK Unmodified 1252.6128 0.61282471 2207;2978 Q9CWK8;Q9WV80;Q6NZD2 Snx2;Snx1 Sorting nexin-2;Sorting nexin-1 no no 0 0 0 0 10.5 2.5 1 1 81.964 81.964 2;3 0.00081236 29047 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 94.309 55.287 20.244 28.427 0 0 0 59.696 19 28 0 0 0 56 1 1 0 0 0 1 8201.8 23226 2978;2207 22354 54127;54128 62824;62825 62824 2 YWELIYEDCMDLIAK Unmodified 1960.8951 0.89507251 3011 Q9CZU6 Cs Citrate synthase, mitochondrial yes yes 0 0 0 0 13 0 1 96.757 96.757 3 0.029968 38976 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 36.022 18.943 49.237 0 20.31 0 0 0 46 0 19 0 0 0 1 0 1 0 0 0 2418 23227 3011 22355 54129 62826 62826 1 YWKPSGTPK Unmodified 1062.5498 0.54983053 725 E9Q3B9;D3YYS6;O35678;Q3UFN1 Mgll Monoglyceride lipase yes no 0 0 0 1 11.5 0.5 1 1 48.204 48.204 3 0.0032963 9657 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 83.862 50.599 188 163 184.03 158 154.83 182.13 177 168 180 158 154 175 1 1 1 1 1 1 73842 23228 725 22356 54130;54131 62827;62828 62828 2 YWLCAATGPSIK Unmodified 1365.6751 0.67510739 1792 P68040 Gnb2l1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed yes yes 0 0 0 0 11.6 0.8 3 1 1 70.668 70.668 2;3;4 4.7906E-13 20376 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 130.98 89.278 134.38 220.73 65.632 26.692 122.61 141.2 126 217 65 28 121 134 3 4 1 1 2 3 120000 23229 1792 22357 54132;54133;54134;54135;54136 62829;62830;62831;62832;62833;62834 62829 6 YWPFYQK Unmodified 1030.4913 0.49125301 3098 Q9D964 Gatm Glycine amidinotransferase, mitochondrial yes yes 0 0 0 0 11 0 1 72.61 72.61 2 0.027041 21246 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 90.285 55.185 84.549 43.243 0 0 75.098 67.147 79 46 0 0 74 65 1 1 0 0 1 1 5722.3 23230 3098 22358 54137 62835 62835 1 YWQIQLDR Unmodified 1120.5665 0.56654322 2333 Q80XD3;A0A0A6YW36;O54829 Rgs7 Regulator of G-protein signaling 7 yes no 0 0 0 0 13 0 1 65.309 65.309 2 0.047266 23748 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 62.464 13.903 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23231 2333 22359 54138 62836 62836 1 YWTLTATGGVQSTASTK Unmodified 1770.8788 0.87882882 2131 Q61553;A0A0G2JDU7;F7BDR1 Fscn1 Fascin yes no 0 0 0 0 8.5 4.56 1 1 1 1 65.924 65.924 3 2.2922E-12 18114 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 118.55 92.112 168.68 63.104 163.41 51.371 135.98 39.442 158 65 157 47 130 37 3 2 2 2 1 1 37092 23232 2131 22360 54139;54140;54141;54142 62837;62838;62839;62840 62839 4 YWYLGPLK Unmodified 1038.5539 0.55385327 3197 Q9ESW4 Agk Acylglycerol kinase, mitochondrial yes yes 0 0 0 0 8 4.97 1 1 1 77.864 77.864 2;3 0.0022239 20940 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 129.16 82.093 233.24 0 113.37 123.75 162.76 29.335 218 0 106 116 162 28 3 0 2 2 3 1 20673 23233 3197 22361 54143;54144;54145 62841;62842;62843 62843 3 YYAEVEAGIEDLR Unmodified 1526.7253 0.72528829 3063 Q9D4H1 Exoc2 Exocyst complex component 2 yes yes 0 0 0 0 4 0 1 74.201 74.201 3 0.029058 27274 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 39.424 16.049 19 0 0 0 0 0 19 0 0 0 0 0 1 0 0 0 0 0 1753.3 23234 3063 22362 54146 62844 62844 1 YYAGWADK Unmodified 972.43413 0.43413207 1562 P47738;A0A0G2JEU1;A0A0G2JFQ0;D3YYF3;Q62148 Aldh2;Aldh1a2 Aldehyde dehydrogenase, mitochondrial;Retinal dehydrogenase 2 yes no 0 0 0 0 9.33 2.62 1 1 1 58.064 58.064 2 0.012498 17731 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 89.142 39.724 276.71 163.93 243.07 145.11 261.34 154.07 260 167 241 148 259 148 3 2 3 2 2 2 19090 23235 1562 22363 54147;54148;54149 62845;62846;62847 62846 3 YYALCGFGGVLSCGLTHTAVVPLDLVK Unmodified 2909.482 0.48195724 2715 Q8VEM8 Slc25a3 Phosphate carrier protein, mitochondrial yes yes 0 0 0 0 11 0 1 93.705 93.705 4 2.5305E-05 30209 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 48.255 40.979 0 29.792 0 0 19.197 19.706 0 28 0 0 19 19 0 1 0 0 1 1 4129.2 23236 2715 22364 54150 62848 62848 1 YYALLHQQK Unmodified 1162.6135 0.61349341 2619 Q8K596 Slc8a2 yes yes 0 0 0 0 8.5 4.39 1 1 1 1 51.579 51.579 3 2.4982E-06 12292 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 150.88 111.12 529.11 320.26 430.24 428.08 465.25 412.85 497 340 435 422 480 398 3 2 2 3 4 3 104350 23237 2619 22365 54151;54152;54153;54154 62849;62850;62851;62852 62850 4 YYDAIACLK Unmodified 1115.5321 0.53213155 1169 O08915 Aip AH receptor-interacting protein yes yes 0 0 0 0 8 0 1 68.318 68.318 2 0.011009 22543 F19-169- HC_Hembras- TMT+AKTA- 17042019-7 74.127 54.491 39.564 27.124 0 0 57.607 28.204 37 28 0 0 56 28 1 1 0 0 1 1 2622.1 23238 1169 22366 54155 62853 62853 1 YYDQICSIEPK Unmodified 1414.6439 0.64386684 3327 Q9WU78 Pdcd6ip Programmed cell death 6-interacting protein yes yes 0 0 0 0 6 0 1 62.479 62.479 3 0.0013981 21304 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 62.088 46.895 39.357 0 57.82 57.762 0 49.036 37 0 56 56 0 46 1 0 1 1 0 1 4082 23239 3327 22367 54156 62854 62854 1 YYEQPDNGVLNYPK Deamidation (N) 1699.773 0.77296676 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 1 0 0 6.29 2.81 1 3 2 1 64.615 64.615 3;4 0.00015115 23058 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 75.462 60.776 800.71 539.59 453.61 391.2 591.59 832.36 751 565 454 380 603 798 8 9 5 5 7 9 86359 23240 1376 22368 54157;54158;54159;54160;54161;54162;54163 62855;62856;62857;62858;62859;62860;62861;62862;62863;62864 62860 444 10 YYEQPDNGVLNYPK Unmodified 1698.789 0.78895118 1376 P14231 Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 yes yes 0 0 0 0 6 0 1 62.63 62.63 3 0.0014746 21316 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 56.147 27.85 0 68.56 35.921 0 58.576 0 0 65 37 0 56 0 0 1 1 0 1 0 3397.9 23241 1376 22368 54164 62865 62865 1 YYFEGIK Unmodified 918.44872 0.4487195 2420 Q8BK64 Ahsa1 Activator of 90 kDa heat shock protein ATPase homolog 1 yes yes 0 0 0 0 9 0 1 64.464 64.464 2 0.021687 20005 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 105.12 43.154 0 138.32 0 147.23 249.56 150.65 0 130 0 139 250 148 0 1 0 1 1 1 11926 23242 2420 22369 54165 62866 62866 1 YYGAQTVR Unmodified 956.47158 0.4715802 1857 P97807 Fh Fumarate hydratase, mitochondrial yes yes 0 0 0 0 7.5 0.5 1 1 38.192 38.192 2 0.0064727 9072 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 108.7 43.021 177 106.83 278.35 121.35 220.74 171.72 167 111 269 130 222 167 2 1 2 2 2 2 32841 23243 1857 22370 54166;54167 62867;62868 62867 2 YYGGGNEGGR Unmodified 1028.4312 0.43117195 1110 G5E924;Q8R081 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 0 0 0 7 3.54 1 1 1 1 31.358 31.358 2 2.589E-08 7026 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 143.7 109.53 108.86 54.709 108.74 108.08 65.858 91.929 102 56 107 102 65 88 2 1 3 3 1 2 19078 23244 1110 22371 54168;54169;54170;54171 62869;62870;62871;62872 62870 4 YYGGGNEGGR Deamidation (N) 1029.4152 0.41518754 1110 G5E924;Q8R081 Hnrnpl Heterogeneous nuclear ribonucleoprotein L yes no 0 1 0 0 4 0 1 34.998 34.998 2 0.01498 9105 F15-169- HC_Hembras- TMT+AKTA- 17042019-3 93.162 58.338 0 0 9.738 0 48.116 0 0 0 9 0 46 0 0 0 1 0 1 0 1386.8 23245 1110 22371 54172 62873 62873 296 1 YYGLQILENVIK Unmodified 1451.8024 0.8024164 2222 Q6P5F9 Xpo1 Exportin-1 yes yes 0 0 0 0 9 0 1 91.655 91.655 3 0.0028509 32463 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 53.528 28.736 20.215 0 28.908 28.881 0 29.848 19 0 28 28 0 28 1 0 1 1 0 1 3679.9 23246 2222 22372 54173 62874 62874 1 YYITIIDAPGHR Unmodified 1417.7354 0.73539946 1729 P62631 Eef1a2 Elongation factor 1-alpha 2 yes yes 0 0 0 0 9 0 1 60.876 60.876 2 2.1905E-13 18289 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 132.88 110.54 0 0 30.296 0 58.576 0 0 0 28 0 56 0 0 0 1 0 1 0 4752.2 23247 1729 22373 54174 62875 62875 1 YYLCLQLR Unmodified 1127.5798 0.57975044 3345;526;369;433 A0A286YDY4;Q9WV92;A7YY80;A0A286YCY8;A2A839;A2A838;A2A842;A2A841;P48193;A2AD32;A0A1D5RLV1;A2AUK5;A2AUK8;Q9Z2H5;A2AUK7;E9PV14 Epb41l3;Epb4.1l3;Epb4.1;Epb41;Epb4.1l1;Epb41l1 Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Protein 4.1;Band 4.1-like protein 1 no no 0 0 0 0 11.5 0.5 1 1 68.893 68.893 2 0.0090636 19509 F22-169- HC_Hembras- TMT+AKTA- 17042019-10 101.21 69.839 0 93 43.798 36.958 46.418 0 0 93 42 37 46 0 0 1 1 1 1 0 26525 23248 369;3345;433;526 22374 54175;54176 62876;62877 62876 2 YYLDSLDR Unmodified 1043.4924 0.49237523 1411 P18872;D3Z2M7 Gnao1 Guanine nucleotide-binding protein G(o) subunit alpha yes no 0 0 0 0 7.4 2.87 1 2 1 1 59.412 59.412 2;3 0.00061463 19924 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 150.88 59.816 912.13 1100.5 1199.5 1139.1 1310.1 1158.4 860 1111 1207 1130 1335 1115 5 7 5 6 6 5 486600 23249 1411 22375 54177;54178;54179;54180;54181 62878;62879;62880;62881;62882;62883;62884 62880 7 YYLNDLDR Unmodified 1070.5033 0.50327426 1428 P21279 Gnaq Guanine nucleotide-binding protein G(q) subunit alpha yes yes 0 0 0 0 9 4 1 1 57.011 57.011 2 0.012128 19497 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 90.64 53.665 196.41 180.25 200.17 196.44 195.4 260.92 185 185 204 194 204 250 2 2 2 2 2 2 21827 23250 1428 22376 54182;54183 62885;62886 62885 2 YYLTDVDR Unmodified 1043.4924 0.49237523 1427 P21278 Gna11 Guanine nucleotide-binding protein subunit alpha-11 yes yes 0 0 0 0 5.5 0.5 1 1 54.293 54.293 2 0.00814 17415 F17-169- HC_Hembras- TMT+AKTA- 17042019-5 94.302 42.448 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23251 1427 22377 54184;54185 62887;62888 62888 2 YYNYVFGFYK Unmodified 1362.6285 0.62847478 1420 P20060 Hexb Beta-hexosaminidase subunit beta yes yes 0 0 0 0 11.5 0.5 1 1 80.982 80.982 2;3 5.3557E-05 22142 F23-169- HC_Hembras- TMT+AKTA- 17042019-11 111.95 73.654 60.088 0 46 0 0 59.696 56 0 46 0 0 56 1 0 1 0 0 1 8046.2 23252 1420 22378 54186;54187 62889;62890 62890 2 YYPEVNEEEEEPEDEVQWTER Unmodified 2698.1195 0.11946561 24 E9QAN4;G3UW47;Q6TA13;E9Q9G6;A0A087WQE8;P33173 Kif1a Kinesin-like protein;Kinesin-like protein KIF1A yes no 0 0 0 0 1 0 1 67.169 67.169 3 3.2799E-11 22602 F12+F24-169- HC_Hembras- TMT+AKTA- 17042019-12 96.79 90.23 15.022 0 0 0 14.644 0 14 0 0 0 14 0 1 0 0 0 1 0 9360.4 23253 24 22379 54188 62891 62891 1 YYPSGDAFASGSDDATCR Unmodified 1938.769 0.76902037 1752 P62881 Gnb5 Guanine nucleotide-binding protein subunit beta-5 yes yes 0 0 0 0 4.5 0.5 1 1 55.134 55.134 3 2.8348E-05 18435 F16-169- HC_Hembras- TMT+AKTA- 17042019-4 66.327 61.425 119.52 83.327 39.884 30.098 101.67 105.83 112 84 37 28 102 102 3 2 1 1 3 3 9675.4 23254 1752 22380 54189;54190 62892;62893;62894 62894 3 YYPVDGYSLLK Unmodified 1316.6653 0.66525421 3447 S4R2H2;S4R2I2;S4R2Q2;S4R1Q0;E9QPP6;A0A0R4J2A8;S4R1H2;A0A0R4J2A6;S4R2K2 Anks1b yes no 0 0 0 0 9.5 2.06 2 1 1 74.199 74.199 2;3 7.2786E-41 24591 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 163.94 103.5 168.69 44.908 103.87 133.38 75.676 234.49 158 46 102 129 83 222 3 1 2 2 2 3 26201 23255 3447 22381 54191;54192;54193;54194 62895;62896;62897;62898 62897 4 YYSIASSSK Unmodified 1004.4815 0.48147619 1530 Q05DV1;P37040 Por NADPH--cytochrome P450 reductase yes no 0 0 0 0 8.5 0.5 1 1 50.066 50.066 2 0.014177 13129 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 70.256 33.861 0 58.811 46.243 0 0 49.036 0 56 46 0 0 46 0 1 1 0 0 1 2890.6 23256 1530 22382 54195;54196 62899;62900 62900 2 YYTGTQSR Unmodified 974.44576 0.44575938 1127 H7BX15;Q80TR1 Adgrl1;Lphn1 Latrophilin-1 yes no 0 0 0 0 7 0 1 32.726 32.726 2 0.012023 6539 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 91.064 67.271 20.178 18.532 19.344 0 19.38 14.371 19 19 19 0 19 14 1 1 1 0 1 1 1523 23257 1127 22383 54197 62901 62901 1 YYTLEEIQK Unmodified 1185.5918 0.59175492 1097 G5E850;P56395 Cyb5a Cytochrome b5 yes no 0 0 0 0 13 0 1 63.224 63.224 3 0.016537 22679 QC TMT-169- HC_Hembras- TMT+AKTA- 17042019-1 50.909 26.117 0 47.858 64.949 56.328 53.661 67.759 0 46 65 56 56 65 0 1 1 1 1 1 7742.7 23258 1097 22384 54198 62902 62902 1 YYTSASGDEMVSLK Unmodified 1549.697 0.69702463 1322 P07901 Hsp90aa1 Heat shock protein HSP 90-alpha yes yes 0 0 0 0 7 0.816 1 1 1 63.346 63.346 3 4.0501E-05 20756 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 99.011 70.714 114.52 0 49.546 78.645 170.95 125.2 107 0 46 74 171 120 2 0 1 2 3 2 31405 23259 1322 22385 54199;54200;54201 62903;62904;62905 62904 3 YYVLLHDVTSGDEQR Unmodified 1793.8584 0.85842773 358 E9PWG2;A0A286YCX6;E9PY51 Trappc8 yes no 0 0 0 0 7 0 1 65.367 65.367 3 0.02335 21727 F18-169- HC_Hembras- TMT+AKTA- 17042019-6 38.995 26.228 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23260 358 22386 54202 62906 62906 1 YYVTIIDAPGHR Unmodified 1403.7197 0.7197494 1341 P10126;D3Z3I8;D3YZ68 Eef1a1 Elongation factor 1-alpha 1 yes no 0 0 0 0 10.2 2.34 1 1 1 1 2 56.734 56.734 2;3 1.3868E-18 16426 F20-169- HC_Hembras- TMT+AKTA- 17042019-8 147.62 122.15 356.36 222.61 325.23 371.45 427.67 251.66 334 218 320 356 425 241 5 4 5 5 5 3 197080 23261 1341 22387 54203;54204;54205;54206;54207;54208 62907;62908;62909;62910;62911;62912;62913 62910 7 YYYWVINPADSSGIAPK Unmodified 1942.9465 0.94651445 3165 Q9EPN1 Nbea Neurobeachin yes yes 0 0 0 0 10.5 0.5 1 1 82.159 82.159 3 0.0010827 25984 F21-169- HC_Hembras- TMT+AKTA- 17042019-9 48.899 27.365 20.09 48.649 67.599 17.789 0 69.29 19 46 66 19 0 65 1 1 2 1 0 2 2918.1 23262 3165 22388 54209;54210 62914;62915;62916 62914 3